Query 016596
Match_columns 386
No_of_seqs 199 out of 1419
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 16:13:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016596.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016596hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4exq_A UPD, URO-D, uroporphyri 100.0 2.8E-78 9.7E-83 590.8 31.6 348 38-385 4-359 (368)
2 1r3s_A URO-D, uroporphyrinogen 100.0 6E-74 2.1E-78 561.7 32.9 347 38-385 9-361 (367)
3 3cyv_A URO-D, UPD, uroporphyri 100.0 6.9E-72 2.3E-76 544.9 34.6 345 40-385 1-349 (354)
4 1j93_A UROD, uroporphyrinogen 100.0 3.3E-71 1.1E-75 539.9 32.5 346 38-386 7-353 (353)
5 2eja_A URO-D, UPD, uroporphyri 100.0 1.4E-70 4.7E-75 532.5 33.9 336 40-386 1-337 (338)
6 2inf_A URO-D, UPD, uroporphyri 100.0 5.9E-70 2E-74 532.1 34.6 338 43-385 12-350 (359)
7 4ay7_A Methylcobalamin\: coenz 100.0 1.3E-67 4.3E-72 513.5 33.5 326 38-385 11-347 (348)
8 2nq5_A 5-methyltetrahydroptero 99.7 1.8E-17 6E-22 174.4 14.2 202 163-384 524-741 (755)
9 1u1j_A 5-methyltetrahydroptero 99.7 3.4E-17 1.1E-21 172.8 14.5 202 163-384 539-757 (765)
10 1ypx_A Putative vitamin-B12 in 99.7 2.2E-16 7.4E-21 153.9 13.2 206 163-384 116-364 (375)
11 3rpd_A Methionine synthase (B1 99.6 3.9E-14 1.3E-18 136.7 16.4 196 165-384 127-349 (357)
12 1t7l_A 5-methyltetrahydroptero 99.4 2E-12 6.7E-17 134.3 14.0 200 164-384 544-760 (766)
13 1u1j_A 5-methyltetrahydroptero 99.3 1.5E-11 5.3E-16 129.7 16.3 185 161-366 135-331 (765)
14 2nq5_A 5-methyltetrahydroptero 99.3 1.9E-11 6.5E-16 128.6 15.3 178 162-365 136-321 (755)
15 3ppg_A 5-methyltetrahydroptero 99.2 8E-11 2.7E-15 122.8 12.1 199 165-384 572-785 (789)
16 3ppg_A 5-methyltetrahydroptero 97.5 0.00054 1.8E-08 71.8 12.2 146 219-370 213-369 (789)
17 1t7l_A 5-methyltetrahydroptero 96.6 0.037 1.3E-06 57.8 14.9 141 217-372 202-353 (766)
18 4djd_D C/Fe-SP, corrinoid/iron 95.9 0.11 3.9E-06 48.7 13.3 151 214-382 68-235 (323)
19 2yci_X 5-methyltetrahydrofolat 95.8 0.36 1.2E-05 44.2 16.0 145 226-382 34-190 (271)
20 1tx2_A DHPS, dihydropteroate s 95.5 0.94 3.2E-05 41.9 17.9 148 226-382 63-224 (297)
21 1aj0_A DHPS, dihydropteroate s 95.5 1.4 4.9E-05 40.3 19.4 149 226-382 38-205 (282)
22 2vp8_A Dihydropteroate synthas 94.7 1.6 5.6E-05 40.7 16.8 145 226-377 65-233 (318)
23 1eye_A DHPS 1, dihydropteroate 93.8 3.9 0.00014 37.3 19.1 143 227-377 30-193 (280)
24 4hb7_A Dihydropteroate synthas 93.6 4.2 0.00014 36.9 17.8 142 226-377 30-186 (270)
25 1vli_A Spore coat polysacchari 93.4 0.43 1.5E-05 45.7 10.3 144 229-384 47-216 (385)
26 2vc6_A MOSA, dihydrodipicolina 93.3 4.4 0.00015 37.2 17.0 126 229-382 85-222 (292)
27 2ftp_A Hydroxymethylglutaryl-C 93.2 0.8 2.7E-05 42.4 11.7 146 224-383 28-199 (302)
28 2wqp_A Polysialic acid capsule 93.1 0.91 3.1E-05 42.9 12.0 144 229-384 38-205 (349)
29 3qze_A DHDPS, dihydrodipicolin 93.0 5.7 0.00019 36.9 18.4 94 228-331 107-211 (314)
30 2qjg_A Putative aldolase MJ040 92.8 3.8 0.00013 36.9 15.6 138 231-383 104-259 (273)
31 2r8w_A AGR_C_1641P; APC7498, d 92.6 3 0.0001 39.1 14.9 155 164-382 90-259 (332)
32 3tr9_A Dihydropteroate synthas 92.5 6.7 0.00023 36.4 18.2 144 226-377 49-218 (314)
33 3daq_A DHDPS, dihydrodipicolin 92.5 6.3 0.00022 36.1 18.1 154 165-382 59-224 (292)
34 3flu_A DHDPS, dihydrodipicolin 92.5 6.4 0.00022 36.1 17.9 122 164-331 63-195 (297)
35 3glc_A Aldolase LSRF; TIM barr 92.4 1.1 3.8E-05 41.3 11.4 137 232-383 131-279 (295)
36 3si9_A DHDPS, dihydrodipicolin 92.2 6 0.00021 36.7 16.3 155 164-382 78-244 (315)
37 1ur4_A Galactanase; hydrolase, 92.2 2 6.8E-05 41.4 13.3 165 219-385 134-344 (399)
38 3tak_A DHDPS, dihydrodipicolin 91.6 8 0.00027 35.4 17.0 155 164-382 57-222 (291)
39 1ydo_A HMG-COA lyase; TIM-barr 91.2 1 3.5E-05 41.9 9.8 146 224-383 26-197 (307)
40 2ehh_A DHDPS, dihydrodipicolin 91.2 8.8 0.0003 35.1 17.3 122 164-331 56-189 (294)
41 2rfg_A Dihydrodipicolinate syn 91.1 8.3 0.00028 35.4 15.9 126 229-382 85-221 (297)
42 3nvt_A 3-deoxy-D-arabino-heptu 91.0 1.6 5.3E-05 42.0 11.0 123 227-360 157-283 (385)
43 1w8s_A FBP aldolase, fructose- 91.0 2.4 8.1E-05 38.4 11.8 138 232-383 98-253 (263)
44 3s5o_A 4-hydroxy-2-oxoglutarat 90.8 10 0.00034 35.0 16.7 122 164-331 70-205 (307)
45 2ekc_A AQ_1548, tryptophan syn 90.6 1.3 4.6E-05 40.0 9.8 107 266-385 4-147 (262)
46 1f6y_A 5-methyltetrahydrofolat 90.6 9.3 0.00032 34.4 17.3 144 225-379 24-182 (262)
47 2y5s_A DHPS, dihydropteroate s 90.4 8.4 0.00029 35.4 15.0 148 227-383 47-215 (294)
48 2vef_A Dihydropteroate synthas 90.3 7.7 0.00026 36.0 14.8 144 226-377 33-217 (314)
49 2cw6_A Hydroxymethylglutaryl-C 90.1 1.4 4.7E-05 40.7 9.6 145 225-383 26-196 (298)
50 3ewb_X 2-isopropylmalate synth 90.0 3.9 0.00013 37.6 12.5 140 224-383 25-190 (293)
51 2dqw_A Dihydropteroate synthas 89.9 3 0.0001 38.4 11.5 147 227-383 53-218 (294)
52 3o63_A Probable thiamine-phosp 89.9 2.5 8.5E-05 37.8 10.8 99 229-344 46-151 (243)
53 2yxg_A DHDPS, dihydrodipicolin 89.7 8.2 0.00028 35.2 14.5 107 165-317 57-172 (289)
54 1ydn_A Hydroxymethylglutaryl-C 89.7 2.2 7.4E-05 39.2 10.5 146 224-383 24-195 (295)
55 1to3_A Putative aldolase YIHT; 89.7 2 6.8E-05 39.8 10.3 138 232-383 114-288 (304)
56 2bdq_A Copper homeostasis prot 89.1 5 0.00017 35.3 11.7 91 229-331 79-189 (224)
57 2ojp_A DHDPS, dihydrodipicolin 89.0 9.4 0.00032 34.9 14.4 126 229-382 86-222 (292)
58 1o5k_A DHDPS, dihydrodipicolin 89.0 8.6 0.00029 35.5 14.1 126 229-382 97-237 (306)
59 3f4w_A Putative hexulose 6 pho 89.0 2.8 9.5E-05 36.1 10.3 126 231-383 69-209 (211)
60 3vnd_A TSA, tryptophan synthas 88.4 7.3 0.00025 35.3 12.9 79 228-306 34-129 (267)
61 3nl6_A Thiamine biosynthetic b 88.3 4 0.00014 41.0 12.1 96 230-345 29-125 (540)
62 2ftp_A Hydroxymethylglutaryl-C 88.3 2.4 8.4E-05 39.1 9.9 70 228-306 161-234 (302)
63 1fob_A Beta-1,4-galactanase; B 88.2 16 0.00056 33.9 17.2 127 218-365 104-251 (334)
64 2wkj_A N-acetylneuraminate lya 87.9 16 0.00056 33.5 16.0 94 229-331 96-199 (303)
65 3cpr_A Dihydrodipicolinate syn 87.8 17 0.00056 33.5 16.5 154 165-382 73-235 (304)
66 3eb2_A Putative dihydrodipicol 87.8 8.2 0.00028 35.5 13.1 93 229-331 89-192 (300)
67 3g8r_A Probable spore coat pol 87.7 11 0.00037 35.5 13.9 116 257-384 69-192 (350)
68 2p0o_A Hypothetical protein DU 87.6 17 0.00059 34.4 15.3 141 228-385 19-171 (372)
69 3iix_A Biotin synthetase, puta 87.6 16 0.00054 33.8 15.3 62 235-307 96-159 (348)
70 1q7z_A 5-methyltetrahydrofolat 87.4 13 0.00044 37.5 15.2 126 225-363 339-476 (566)
71 1r30_A Biotin synthase; SAM ra 87.1 20 0.00068 33.7 15.8 66 235-311 111-180 (369)
72 3rmj_A 2-isopropylmalate synth 86.9 8.7 0.0003 36.5 13.0 139 225-383 33-197 (370)
73 3l23_A Sugar phosphate isomera 86.9 18 0.00061 32.9 19.0 156 225-386 107-301 (303)
74 1xky_A Dihydrodipicolinate syn 86.8 15 0.00053 33.6 14.4 93 229-331 97-200 (301)
75 1zco_A 2-dehydro-3-deoxyphosph 86.8 9.3 0.00032 34.4 12.6 114 227-352 38-157 (262)
76 1f6k_A N-acetylneuraminate lya 86.5 19 0.00065 32.8 15.7 121 165-331 61-191 (293)
77 2cw6_A Hydroxymethylglutaryl-C 86.4 4.3 0.00015 37.3 10.3 71 227-306 157-231 (298)
78 2vc7_A Aryldialkylphosphatase; 86.3 11 0.00038 34.2 13.3 97 263-364 150-258 (314)
79 2wkj_A N-acetylneuraminate lya 86.2 7.6 0.00026 35.8 11.9 70 230-306 36-112 (303)
80 2h9a_B CO dehydrogenase/acetyl 86.2 13 0.00046 34.3 13.5 123 226-365 74-212 (310)
81 2vc6_A MOSA, dihydrodipicolina 86.0 2.8 9.7E-05 38.5 8.8 72 228-306 23-101 (292)
82 1ydo_A HMG-COA lyase; TIM-barr 85.8 3 0.0001 38.7 8.9 69 228-305 159-231 (307)
83 3na8_A Putative dihydrodipicol 85.7 15 0.00051 34.0 13.7 122 164-331 80-213 (315)
84 3ivs_A Homocitrate synthase, m 85.7 5.9 0.0002 38.4 11.2 139 226-383 61-220 (423)
85 2ztj_A Homocitrate synthase; ( 85.6 10 0.00034 36.2 12.8 140 225-383 24-184 (382)
86 2r8w_A AGR_C_1641P; APC7498, d 85.6 5.5 0.00019 37.3 10.7 70 230-306 59-135 (332)
87 3l21_A DHDPS, dihydrodipicolin 85.6 12 0.00042 34.3 13.0 121 164-330 71-200 (304)
88 1f6k_A N-acetylneuraminate lya 85.5 4.7 0.00016 37.0 10.0 71 229-306 27-105 (293)
89 1thf_D HISF protein; thermophI 85.4 18 0.00063 31.7 14.9 82 230-322 34-123 (253)
90 3tak_A DHDPS, dihydrodipicolin 85.1 9.4 0.00032 34.9 12.0 71 229-306 25-102 (291)
91 3flu_A DHDPS, dihydrodipicolin 85.1 9.5 0.00032 35.0 12.0 71 229-306 31-108 (297)
92 3m5v_A DHDPS, dihydrodipicolin 85.0 23 0.00078 32.4 17.2 155 164-382 63-229 (301)
93 3rmj_A 2-isopropylmalate synth 85.0 5.7 0.00019 37.8 10.6 85 226-319 157-256 (370)
94 1ydn_A Hydroxymethylglutaryl-C 84.9 4.7 0.00016 36.9 9.8 67 231-306 160-230 (295)
95 3eeg_A 2-isopropylmalate synth 84.9 1.8 6.1E-05 40.6 6.9 140 225-383 27-191 (325)
96 3ble_A Citramalate synthase fr 84.4 4.1 0.00014 38.3 9.2 85 226-319 169-265 (337)
97 3gr7_A NADPH dehydrogenase; fl 84.1 3.3 0.00011 39.0 8.4 108 221-330 139-287 (340)
98 2nx9_A Oxaloacetate decarboxyl 83.9 4.9 0.00017 39.5 9.8 110 227-351 159-280 (464)
99 2yxg_A DHDPS, dihydrodipicolin 83.8 11 0.00039 34.3 11.9 85 228-319 23-118 (289)
100 3qfe_A Putative dihydrodipicol 83.8 14 0.00049 34.2 12.6 71 229-306 35-112 (318)
101 1ka9_F Imidazole glycerol phos 83.7 14 0.00046 32.6 12.1 138 230-380 35-194 (252)
102 1o5k_A DHDPS, dihydrodipicolin 83.5 5 0.00017 37.1 9.3 83 230-319 37-130 (306)
103 2v9d_A YAGE; dihydrodipicolini 83.5 15 0.00053 34.4 12.9 122 164-331 87-223 (343)
104 3l21_A DHDPS, dihydrodipicolin 83.4 8.6 0.0003 35.4 10.9 83 230-319 40-133 (304)
105 3gka_A N-ethylmaleimide reduct 83.4 6.6 0.00023 37.2 10.3 108 221-329 156-296 (361)
106 4ab4_A Xenobiotic reductase B; 83.2 6.8 0.00023 37.2 10.3 108 221-329 148-288 (362)
107 3e96_A Dihydrodipicolinate syn 83.2 9.5 0.00032 35.3 11.1 70 230-306 37-112 (316)
108 3m5v_A DHDPS, dihydrodipicolin 83.1 10 0.00036 34.8 11.3 72 229-306 31-109 (301)
109 3ovp_A Ribulose-phosphate 3-ep 83.1 7.5 0.00026 34.2 9.9 126 230-384 78-220 (228)
110 3ovg_A Amidohydrolase; structu 82.8 10 0.00034 36.0 11.3 95 265-364 170-276 (363)
111 3qze_A DHDPS, dihydrodipicolin 82.8 12 0.0004 34.7 11.6 70 230-306 48-124 (314)
112 3a5f_A Dihydrodipicolinate syn 82.7 20 0.0007 32.6 13.1 93 229-331 86-189 (291)
113 1hjs_A Beta-1,4-galactanase; 4 82.5 31 0.0011 32.0 15.3 126 219-365 104-250 (332)
114 2isw_A Putative fructose-1,6-b 82.4 14 0.00049 34.3 11.8 112 230-348 33-165 (323)
115 3qfe_A Putative dihydrodipicol 82.3 27 0.00094 32.2 14.0 122 164-331 67-204 (318)
116 3si9_A DHDPS, dihydrodipicolin 82.1 10 0.00036 35.1 10.9 70 230-306 47-123 (315)
117 3l5a_A NADH/flavin oxidoreduct 81.9 9.3 0.00032 37.0 10.9 121 221-347 165-339 (419)
118 2nuw_A 2-keto-3-deoxygluconate 81.8 12 0.00042 34.0 11.3 94 226-330 78-179 (288)
119 3na8_A Putative dihydrodipicol 81.8 11 0.00038 34.8 11.1 70 230-306 49-125 (315)
120 3fkr_A L-2-keto-3-deoxyarabona 81.7 22 0.00075 32.7 13.0 71 229-306 32-109 (309)
121 1nvm_A HOA, 4-hydroxy-2-oxoval 81.7 33 0.0011 32.0 14.5 145 224-384 28-190 (345)
122 3k13_A 5-methyltetrahydrofolat 81.7 32 0.0011 31.6 17.1 133 226-366 37-185 (300)
123 1qop_A Tryptophan synthase alp 81.6 6 0.0002 35.7 8.9 42 266-308 4-52 (268)
124 1nsj_A PRAI, phosphoribosyl an 81.5 8.6 0.0003 33.3 9.5 140 230-383 13-204 (205)
125 2rfg_A Dihydrodipicolinate syn 81.3 12 0.00042 34.3 11.0 72 228-306 23-101 (297)
126 3nav_A Tryptophan synthase alp 81.3 3.7 0.00013 37.3 7.3 108 266-385 7-150 (271)
127 2v9d_A YAGE; dihydrodipicolini 81.1 11 0.00038 35.3 10.9 83 230-319 56-149 (343)
128 3b4u_A Dihydrodipicolinate syn 81.0 14 0.00046 33.9 11.2 71 229-306 27-104 (294)
129 3vnd_A TSA, tryptophan synthas 80.9 5.6 0.00019 36.0 8.4 42 266-307 5-52 (267)
130 1nvm_A HOA, 4-hydroxy-2-oxoval 80.7 10 0.00035 35.5 10.5 71 226-305 149-224 (345)
131 3bg3_A Pyruvate carboxylase, m 80.7 6.4 0.00022 40.9 9.7 87 226-321 261-359 (718)
132 1v5x_A PRA isomerase, phosphor 80.7 20 0.0007 30.8 11.6 141 230-385 12-200 (203)
133 3h5d_A DHDPS, dihydrodipicolin 80.5 35 0.0012 31.3 14.2 121 164-331 63-195 (311)
134 3ewb_X 2-isopropylmalate synth 80.4 9.5 0.00033 35.0 9.9 70 227-305 151-227 (293)
135 3cpr_A Dihydrodipicolinate syn 80.3 11 0.00038 34.6 10.4 70 230-306 41-117 (304)
136 3daq_A DHDPS, dihydrodipicolin 80.2 17 0.00057 33.2 11.6 72 228-306 25-103 (292)
137 3kws_A Putative sugar isomeras 79.7 33 0.0011 30.5 15.3 163 213-384 95-283 (287)
138 2ekc_A AQ_1548, tryptophan syn 79.7 33 0.0011 30.6 14.1 77 228-306 33-128 (262)
139 1xky_A Dihydrodipicolinate syn 79.7 11 0.00037 34.7 10.1 70 230-306 37-113 (301)
140 3pm6_A Putative fructose-bisph 79.4 37 0.0013 31.2 13.4 140 230-381 42-218 (306)
141 3a5f_A Dihydrodipicolinate syn 79.2 10 0.00035 34.6 9.8 86 228-320 24-120 (291)
142 3tn4_A Phosphotriesterase; lac 79.1 26 0.00088 33.1 12.7 98 264-363 193-301 (360)
143 3n9r_A Fructose-bisphosphate a 79.0 28 0.00095 32.1 12.5 112 230-348 32-167 (307)
144 1x7f_A Outer surface protein; 79.0 17 0.00057 34.7 11.2 141 228-385 43-197 (385)
145 1h1y_A D-ribulose-5-phosphate 78.5 18 0.0006 31.6 10.8 127 230-383 78-223 (228)
146 3eb2_A Putative dihydrodipicol 78.5 13 0.00044 34.1 10.2 71 229-306 28-105 (300)
147 1pii_A N-(5'phosphoribosyl)ant 78.4 7.1 0.00024 38.2 8.7 202 164-384 195-452 (452)
148 3ble_A Citramalate synthase fr 78.4 5.8 0.0002 37.2 7.9 144 224-383 39-209 (337)
149 1rqb_A Transcarboxylase 5S sub 78.3 7.8 0.00027 38.8 9.2 87 227-321 176-274 (539)
150 1vzw_A Phosphoribosyl isomeras 78.1 23 0.00078 31.0 11.5 88 230-331 36-131 (244)
151 3mcm_A 2-amino-4-hydroxy-6-hyd 78.0 26 0.0009 34.0 12.6 146 228-376 214-381 (442)
152 1q7z_A 5-methyltetrahydrofolat 78.0 52 0.0018 33.0 15.3 144 222-384 122-290 (566)
153 3h5d_A DHDPS, dihydrodipicolin 78.0 11 0.00036 34.9 9.5 83 230-319 32-126 (311)
154 2ehh_A DHDPS, dihydrodipicolin 77.5 12 0.0004 34.3 9.6 72 228-306 23-101 (294)
155 1vs1_A 3-deoxy-7-phosphoheptul 77.3 38 0.0013 30.7 12.8 121 228-361 54-180 (276)
156 2ojp_A DHDPS, dihydrodipicolin 77.3 14 0.00048 33.7 10.0 84 229-319 25-119 (292)
157 3d0c_A Dihydrodipicolinate syn 76.9 28 0.00096 32.1 12.1 70 230-306 37-112 (314)
158 2hmc_A AGR_L_411P, dihydrodipi 76.7 27 0.00094 32.7 12.1 67 230-306 51-124 (344)
159 3e96_A Dihydrodipicolinate syn 76.6 35 0.0012 31.4 12.8 108 164-318 68-179 (316)
160 2y1h_A Putative deoxyribonucle 76.3 31 0.0011 30.4 12.1 94 260-364 122-218 (272)
161 3eeg_A 2-isopropylmalate synth 76.1 9.6 0.00033 35.5 8.7 84 227-319 152-250 (325)
162 1rqb_A Transcarboxylase 5S sub 75.8 22 0.00074 35.6 11.5 144 225-383 46-215 (539)
163 3l5l_A Xenobiotic reductase A; 75.1 6.4 0.00022 37.3 7.3 108 221-329 153-304 (363)
164 3hgj_A Chromate reductase; TIM 75.1 14 0.00048 34.6 9.7 86 221-307 147-259 (349)
165 3ivs_A Homocitrate synthase, m 74.8 16 0.00056 35.3 10.1 79 229-317 183-273 (423)
166 2bmb_A Folic acid synthesis pr 73.7 76 0.0026 31.6 16.6 153 226-383 249-457 (545)
167 3inp_A D-ribulose-phosphate 3- 73.6 15 0.00053 32.7 9.0 125 230-383 100-245 (246)
168 3obe_A Sugar phosphate isomera 73.6 52 0.0018 29.7 18.6 155 226-386 114-303 (305)
169 4dpp_A DHDPS 2, dihydrodipicol 73.4 19 0.00066 34.0 10.0 83 230-319 84-177 (360)
170 3fok_A Uncharacterized protein 73.1 56 0.0019 30.0 12.7 138 232-382 134-296 (307)
171 2nx9_A Oxaloacetate decarboxyl 73.0 23 0.00079 34.7 10.9 143 226-383 30-198 (464)
172 3dz1_A Dihydrodipicolinate syn 72.9 19 0.00065 33.2 9.8 70 229-306 32-108 (313)
173 1tv8_A MOAA, molybdenum cofact 72.8 35 0.0012 31.4 11.8 61 237-308 64-129 (340)
174 3ctl_A D-allulose-6-phosphate 72.6 17 0.00059 31.9 9.0 126 230-382 71-218 (231)
175 1qop_A Tryptophan synthase alp 71.8 24 0.00083 31.6 10.1 78 229-306 34-128 (268)
176 2r91_A 2-keto-3-deoxy-(6-phosp 71.6 39 0.0013 30.6 11.5 96 226-331 77-180 (286)
177 3noy_A 4-hydroxy-3-methylbut-2 71.5 40 0.0014 31.7 11.5 139 227-384 47-203 (366)
178 3q94_A Fructose-bisphosphate a 71.5 53 0.0018 29.9 12.2 112 230-348 36-171 (288)
179 1bf6_A Phosphotriesterase homo 71.3 54 0.0019 28.9 12.5 97 264-365 138-245 (291)
180 3gnh_A L-lysine, L-arginine ca 71.0 21 0.00072 33.3 9.9 84 231-325 172-265 (403)
181 2tps_A Protein (thiamin phosph 70.9 49 0.0017 28.3 12.3 82 229-321 34-116 (227)
182 3gtx_A Organophosphorus hydrol 70.9 44 0.0015 31.1 12.0 98 265-365 174-283 (339)
183 1jcn_A Inosine monophosphate d 70.8 59 0.002 32.0 13.5 67 229-306 257-323 (514)
184 1yad_A Regulatory protein TENI 70.0 48 0.0017 28.3 11.4 124 231-386 80-217 (221)
185 3nav_A Tryptophan synthase alp 70.0 27 0.00091 31.6 9.8 145 228-384 36-206 (271)
186 1twd_A Copper homeostasis prot 69.9 21 0.00072 31.9 8.9 92 229-332 76-182 (256)
187 3s5o_A 4-hydroxy-2-oxoglutarat 69.8 11 0.00038 34.7 7.4 70 230-306 39-115 (307)
188 1vyr_A Pentaerythritol tetrani 69.4 33 0.0011 32.3 10.8 105 224-329 159-303 (364)
189 3b4u_A Dihydrodipicolinate syn 69.1 67 0.0023 29.1 13.1 93 229-330 88-195 (294)
190 3hbl_A Pyruvate carboxylase; T 68.8 22 0.00074 39.1 10.5 111 226-351 692-814 (1150)
191 3q58_A N-acetylmannosamine-6-p 68.5 58 0.002 28.4 11.6 123 231-381 93-227 (229)
192 1vr6_A Phospho-2-dehydro-3-deo 68.2 40 0.0014 31.6 10.9 120 228-360 122-247 (350)
193 3igs_A N-acetylmannosamine-6-p 68.0 59 0.002 28.4 11.5 125 231-383 93-229 (232)
194 4i6k_A Amidohydrolase family p 67.9 17 0.00059 32.8 8.3 100 263-366 136-252 (294)
195 3d0c_A Dihydrodipicolinate syn 67.8 74 0.0025 29.1 20.0 155 164-382 68-231 (314)
196 1w3i_A EDA, 2-keto-3-deoxy glu 67.6 40 0.0014 30.6 10.7 95 227-331 79-181 (293)
197 1tqj_A Ribulose-phosphate 3-ep 67.4 4.6 0.00016 35.6 4.1 69 230-306 21-91 (230)
198 3ajx_A 3-hexulose-6-phosphate 67.1 28 0.00096 29.4 9.1 122 231-379 69-204 (207)
199 3k2g_A Resiniferatoxin-binding 66.6 32 0.0011 32.4 10.0 97 265-364 191-306 (364)
200 3r2g_A Inosine 5'-monophosphat 66.5 45 0.0015 31.4 11.0 68 228-306 101-168 (361)
201 1eep_A Inosine 5'-monophosphat 66.4 20 0.00068 34.3 8.7 65 231-306 157-221 (404)
202 1h5y_A HISF; histidine biosynt 66.2 27 0.00091 30.3 9.0 84 229-321 36-125 (253)
203 2qf7_A Pyruvate carboxylase pr 66.1 24 0.0008 38.9 10.1 86 226-321 709-806 (1165)
204 1vrd_A Inosine-5'-monophosphat 66.1 26 0.00089 34.4 9.7 67 229-306 239-305 (494)
205 3usb_A Inosine-5'-monophosphat 66.0 64 0.0022 31.8 12.6 67 229-306 258-324 (511)
206 3fkr_A L-2-keto-3-deoxyarabona 65.6 39 0.0013 31.0 10.2 79 164-287 64-145 (309)
207 4fxs_A Inosine-5'-monophosphat 65.4 72 0.0025 31.3 12.7 67 230-307 234-300 (496)
208 3iwp_A Copper homeostasis prot 65.4 81 0.0028 28.7 15.1 77 231-320 51-149 (287)
209 3iwp_A Copper homeostasis prot 65.3 42 0.0014 30.6 10.0 91 229-331 114-220 (287)
210 1dos_A Aldolase class II; lyas 65.2 83 0.0028 29.5 12.4 100 279-382 101-249 (358)
211 3bw2_A 2-nitropropane dioxygen 65.0 62 0.0021 30.3 11.8 60 229-306 112-171 (369)
212 2gzx_A Putative TATD related D 64.8 61 0.0021 28.1 11.2 97 260-365 105-207 (265)
213 2r14_A Morphinone reductase; H 64.7 93 0.0032 29.3 13.0 107 222-329 162-308 (377)
214 3u0h_A Xylose isomerase domain 64.0 74 0.0025 27.7 16.4 156 225-384 83-275 (281)
215 2czd_A Orotidine 5'-phosphate 63.3 44 0.0015 28.4 9.6 127 226-381 65-205 (208)
216 1ujp_A Tryptophan synthase alp 62.7 19 0.00065 32.5 7.3 62 312-385 83-144 (271)
217 3dz1_A Dihydrodipicolinate syn 62.3 61 0.0021 29.7 10.9 50 230-287 93-142 (313)
218 3iv3_A Tagatose 1,6-diphosphat 62.2 61 0.0021 30.1 10.8 119 232-360 116-280 (332)
219 1gml_A T-complex protein 1 sub 62.2 10 0.00036 31.9 5.2 73 253-330 51-128 (178)
220 2qgq_A Protein TM_1862; alpha- 61.7 92 0.0032 28.1 15.6 71 233-307 43-120 (304)
221 1z41_A YQJM, probable NADH-dep 60.9 53 0.0018 30.4 10.4 107 221-329 139-286 (338)
222 4af0_A Inosine-5'-monophosphat 60.7 24 0.00082 35.2 8.0 51 292-352 285-343 (556)
223 3ngf_A AP endonuclease, family 60.5 86 0.0029 27.3 11.6 124 226-353 93-239 (269)
224 2r91_A 2-keto-3-deoxy-(6-phosp 60.4 50 0.0017 29.8 9.9 69 228-306 21-96 (286)
225 1icp_A OPR1, 12-oxophytodienoa 60.3 74 0.0025 30.0 11.4 106 223-329 164-310 (376)
226 2nuw_A 2-keto-3-deoxygluconate 59.0 49 0.0017 29.9 9.5 69 228-306 22-97 (288)
227 2pcq_A Putative dihydrodipicol 59.0 1E+02 0.0035 27.7 12.6 127 226-382 75-212 (283)
228 3pnz_A Phosphotriesterase fami 58.9 63 0.0021 29.9 10.4 96 265-365 169-275 (330)
229 3kru_A NADH:flavin oxidoreduct 58.9 39 0.0013 31.6 9.0 107 221-329 138-286 (343)
230 1w3i_A EDA, 2-keto-3-deoxy glu 58.6 51 0.0017 29.9 9.6 69 228-306 22-97 (293)
231 2gou_A Oxidoreductase, FMN-bin 58.6 1.2E+02 0.0041 28.4 12.7 107 222-329 157-302 (365)
232 4fo4_A Inosine 5'-monophosphat 58.4 39 0.0013 31.9 8.9 67 229-306 110-176 (366)
233 1qo2_A Molecule: N-((5-phospho 57.3 53 0.0018 28.5 9.3 88 229-331 33-128 (241)
234 1xwy_A DNAse TATD, deoxyribonu 57.2 48 0.0016 29.0 9.0 94 262-365 110-210 (264)
235 2y88_A Phosphoribosyl isomeras 57.2 12 0.0004 32.8 4.8 84 230-325 35-126 (244)
236 2v82_A 2-dehydro-3-deoxy-6-pho 56.5 62 0.0021 27.4 9.4 120 231-383 72-202 (212)
237 2ob3_A Parathion hydrolase; me 55.7 56 0.0019 30.0 9.5 100 264-365 148-270 (330)
238 3tqv_A Nicotinate-nucleotide p 55.7 43 0.0015 30.5 8.3 60 230-307 209-270 (287)
239 3ngf_A AP endonuclease, family 55.2 70 0.0024 28.0 9.8 91 293-385 29-144 (269)
240 3b0p_A TRNA-dihydrouridine syn 55.2 84 0.0029 29.2 10.7 105 227-345 71-216 (350)
241 3t7v_A Methylornithine synthas 55.2 1.3E+02 0.0044 27.6 12.5 64 235-306 103-168 (350)
242 3apt_A Methylenetetrahydrofola 54.9 1.3E+02 0.0043 27.5 14.6 137 231-385 34-199 (310)
243 3qc0_A Sugar isomerase; TIM ba 54.8 1E+02 0.0036 26.6 14.4 164 213-384 74-274 (275)
244 3rcm_A TATD family hydrolase; 53.9 54 0.0018 29.7 8.9 94 263-365 113-212 (287)
245 2w6r_A Imidazole glycerol phos 53.5 1.1E+02 0.0039 26.6 11.9 78 229-318 33-119 (266)
246 3tha_A Tryptophan synthase alp 53.2 79 0.0027 28.1 9.6 80 227-306 29-122 (252)
247 1olt_A Oxygen-independent copr 53.1 1.6E+02 0.0054 28.3 12.7 61 239-307 104-170 (457)
248 2d73_A Alpha-glucosidase SUSB; 52.8 39 0.0013 34.9 8.4 126 224-368 369-514 (738)
249 3l0g_A Nicotinate-nucleotide p 52.3 35 0.0012 31.2 7.2 61 230-308 218-280 (300)
250 2ztj_A Homocitrate synthase; ( 52.2 66 0.0023 30.4 9.5 70 227-305 146-219 (382)
251 2v82_A 2-dehydro-3-deoxy-6-pho 52.0 1E+02 0.0035 25.9 10.0 79 229-322 22-103 (212)
252 1wdp_A Beta-amylase; (beta/alp 51.7 3.4 0.00012 40.4 0.3 56 231-289 38-97 (495)
253 1fa2_A Beta-amylase; TIM barre 51.7 3.2 0.00011 40.6 0.1 56 231-289 39-98 (498)
254 1gvf_A Tagatose-bisphosphate a 51.7 55 0.0019 29.8 8.4 110 230-348 33-167 (286)
255 3fa4_A 2,3-dimethylmalate lyas 51.2 43 0.0015 30.7 7.7 68 225-308 169-240 (302)
256 3eoo_A Methylisocitrate lyase; 51.2 48 0.0017 30.3 8.0 67 225-308 170-240 (298)
257 1q6o_A Humps, 3-keto-L-gulonat 51.2 68 0.0023 27.3 8.8 122 234-383 75-213 (216)
258 1lt8_A Betaine-homocysteine me 51.1 1.7E+02 0.0058 27.9 17.1 142 222-384 135-317 (406)
259 1zzm_A Putative deoxyribonucle 50.7 93 0.0032 26.9 9.8 94 263-365 113-210 (259)
260 2ffi_A 2-pyrone-4,6-dicarboxyl 50.6 77 0.0026 27.9 9.4 122 235-366 101-240 (288)
261 1rd5_A Tryptophan synthase alp 50.5 57 0.002 28.8 8.4 40 267-307 6-52 (262)
262 2xfr_A Beta-amylase; hydrolase 50.4 3.6 0.00012 40.5 0.3 56 231-289 36-95 (535)
263 1rvg_A Fructose-1,6-bisphospha 50.3 1E+02 0.0034 28.3 10.0 110 230-348 32-165 (305)
264 1xi3_A Thiamine phosphate pyro 49.9 1.1E+02 0.0039 25.5 13.7 77 229-319 29-106 (215)
265 3zwt_A Dihydroorotate dehydrog 49.7 87 0.003 29.4 9.8 91 211-307 195-327 (367)
266 1j6o_A TATD-related deoxyribon 48.8 1.1E+02 0.0037 26.9 10.0 97 260-365 116-217 (268)
267 2hsa_B 12-oxophytodienoate red 48.6 59 0.002 31.1 8.5 85 221-306 166-285 (402)
268 3a24_A Alpha-galactosidase; gl 48.3 83 0.0028 32.0 9.9 80 224-309 307-396 (641)
269 3iyg_B T-complex protein 1 sub 48.2 74 0.0025 31.4 9.5 108 254-364 247-400 (513)
270 4af0_A Inosine-5'-monophosphat 48.2 1.3E+02 0.0045 29.9 10.9 89 228-330 282-394 (556)
271 3jr2_A Hexulose-6-phosphate sy 48.0 1.2E+02 0.004 25.8 9.9 89 231-333 75-179 (218)
272 3khj_A Inosine-5-monophosphate 47.9 1.2E+02 0.004 28.5 10.4 66 229-306 107-172 (361)
273 3q94_A Fructose-bisphosphate a 47.4 16 0.00056 33.3 4.1 120 210-353 157-283 (288)
274 2tps_A Protein (thiamin phosph 47.3 1.3E+02 0.0044 25.4 11.2 89 283-384 119-223 (227)
275 1ps9_A 2,4-dienoyl-COA reducta 47.3 47 0.0016 33.8 8.2 85 221-306 136-247 (671)
276 3ixl_A Amdase, arylmalonate de 47.1 54 0.0019 28.8 7.5 130 223-365 50-190 (240)
277 1i60_A IOLI protein; beta barr 47.1 96 0.0033 26.8 9.4 28 293-320 20-56 (278)
278 4e38_A Keto-hydroxyglutarate-a 46.2 87 0.003 27.5 8.6 81 268-362 26-114 (232)
279 3rhg_A Putative phophotriester 46.2 1.5E+02 0.005 27.8 10.8 100 265-365 180-297 (365)
280 2hmc_A AGR_L_411P, dihydrodipi 46.1 1.6E+02 0.0053 27.4 10.9 92 229-330 108-214 (344)
281 2q02_A Putative cytoplasmic pr 45.2 68 0.0023 27.8 8.0 92 293-385 25-133 (272)
282 1ass_A Thermosome; chaperonin, 45.2 39 0.0013 27.7 5.9 67 253-322 45-116 (159)
283 3a5v_A Alpha-galactosidase; be 45.0 44 0.0015 31.8 7.0 67 236-309 41-131 (397)
284 3gg7_A Uncharacterized metallo 44.8 59 0.002 28.9 7.4 90 263-365 103-199 (254)
285 2d2r_A Undecaprenyl pyrophosph 44.7 1.6E+02 0.0056 25.9 10.6 64 226-293 46-114 (245)
286 1vhc_A Putative KHG/KDPG aldol 44.6 1.5E+02 0.0053 25.5 10.7 107 230-356 80-217 (224)
287 1tqx_A D-ribulose-5-phosphate 44.5 1.3E+02 0.0043 26.2 9.4 103 266-383 100-223 (227)
288 2xio_A Putative deoxyribonucle 44.4 1.7E+02 0.0059 26.1 11.2 91 262-365 125-222 (301)
289 2z6i_A Trans-2-enoyl-ACP reduc 43.9 98 0.0033 28.4 9.1 82 230-330 79-172 (332)
290 1qpo_A Quinolinate acid phosph 43.8 75 0.0026 28.8 8.0 64 230-308 205-270 (284)
291 1gox_A (S)-2-hydroxy-acid oxid 43.7 1.7E+02 0.0057 27.4 10.8 62 268-330 215-290 (370)
292 4avf_A Inosine-5'-monophosphat 43.0 84 0.0029 30.8 8.9 67 229-306 231-297 (490)
293 3obe_A Sugar phosphate isomera 43.0 1.1E+02 0.0039 27.3 9.4 48 336-385 107-163 (305)
294 3ih1_A Methylisocitrate lyase; 42.8 89 0.003 28.6 8.4 67 225-308 174-244 (305)
295 4a3u_A NCR, NADH\:flavin oxido 42.2 2.1E+02 0.0073 26.5 12.1 85 221-306 147-260 (358)
296 3lye_A Oxaloacetate acetyl hyd 42.0 94 0.0032 28.5 8.4 65 225-306 177-246 (307)
297 2ze3_A DFA0005; organic waste 41.9 1.2E+02 0.004 27.3 9.0 65 226-308 168-233 (275)
298 1yix_A Deoxyribonuclease YCFH; 41.8 1.7E+02 0.0058 25.2 12.4 95 262-365 109-208 (265)
299 3l23_A Sugar phosphate isomera 41.5 1.2E+02 0.0039 27.2 9.1 86 292-379 34-144 (303)
300 1xg4_A Probable methylisocitra 41.1 1.2E+02 0.0041 27.6 9.0 67 225-308 166-236 (295)
301 3tdn_A FLR symmetric alpha-bet 41.1 63 0.0021 28.2 7.0 82 229-322 38-128 (247)
302 3b8i_A PA4872 oxaloacetate dec 41.0 56 0.0019 29.7 6.7 66 226-308 168-235 (287)
303 2vg3_A Undecaprenyl pyrophosph 40.9 1.9E+02 0.0065 26.1 10.1 64 226-293 86-154 (284)
304 3civ_A Endo-beta-1,4-mannanase 40.6 2.2E+02 0.0076 26.2 11.2 127 216-353 142-293 (343)
305 2c6q_A GMP reductase 2; TIM ba 40.6 1.9E+02 0.0066 26.8 10.7 66 231-307 122-189 (351)
306 3paj_A Nicotinate-nucleotide p 40.1 73 0.0025 29.4 7.4 61 230-308 242-304 (320)
307 2r8c_A Putative amidohydrolase 40.0 83 0.0028 29.5 8.2 83 232-325 181-273 (426)
308 1wa3_A 2-keto-3-deoxy-6-phosph 39.7 59 0.002 27.3 6.4 119 232-383 76-202 (205)
309 1uas_A Alpha-galactosidase; TI 39.3 58 0.002 30.4 6.8 67 236-309 41-132 (362)
310 2gjl_A Hypothetical protein PA 39.2 2.2E+02 0.0076 25.8 11.7 57 231-306 88-144 (328)
311 1luc_B Bacterial luciferase; m 39.0 13 0.00046 34.2 2.2 28 334-361 272-299 (324)
312 3ffs_A Inosine-5-monophosphate 38.9 1E+02 0.0034 29.5 8.4 66 229-306 146-211 (400)
313 3nur_A Amidohydrolase; TIM bar 38.7 63 0.0022 30.2 7.0 69 312-385 118-186 (357)
314 3lab_A Putative KDPG (2-keto-3 38.6 1.2E+02 0.0041 26.3 8.1 58 293-362 31-93 (217)
315 3qas_B Undecaprenyl pyrophosph 38.5 1.5E+02 0.0051 26.3 8.9 107 226-352 48-162 (253)
316 3ayv_A Putative uncharacterize 38.3 1.5E+02 0.005 25.4 9.1 82 213-300 67-154 (254)
317 3qja_A IGPS, indole-3-glycerol 38.1 2.2E+02 0.0074 25.4 11.1 121 234-380 130-261 (272)
318 3kws_A Putative sugar isomeras 37.9 2E+02 0.007 25.0 11.1 94 292-385 43-159 (287)
319 3ayv_A Putative uncharacterize 37.5 1.5E+02 0.0051 25.4 9.0 71 292-363 15-99 (254)
320 3irs_A Uncharacterized protein 37.4 1.2E+02 0.0041 27.1 8.5 89 292-385 52-151 (291)
321 3bo9_A Putative nitroalkan dio 37.4 88 0.003 28.7 7.6 114 228-366 91-217 (326)
322 3ig9_A SOC small outer capsid 37.4 4.6 0.00016 28.5 -0.9 19 10-28 27-45 (78)
323 3qvl_A Putative hydantoin race 37.3 2.1E+02 0.0072 25.0 12.2 99 224-327 15-116 (245)
324 3tqv_A Nicotinate-nucleotide p 37.0 81 0.0028 28.7 7.0 10 180-189 92-101 (287)
325 1k77_A EC1530, hypothetical pr 36.8 2E+02 0.0067 24.5 11.9 130 226-359 85-239 (260)
326 3bdk_A D-mannonate dehydratase 36.7 2.7E+02 0.0094 26.2 11.2 71 253-325 189-284 (386)
327 3gnn_A Nicotinate-nucleotide p 36.6 89 0.0031 28.5 7.3 60 231-308 221-282 (298)
328 1jub_A Dihydroorotate dehydrog 36.3 2.4E+02 0.0081 25.3 10.9 69 230-307 110-192 (311)
329 1nfp_A LUXF gene product; flav 36.3 24 0.0008 30.5 3.3 27 335-361 171-198 (228)
330 3dx5_A Uncharacterized protein 36.0 82 0.0028 27.6 7.1 28 336-363 77-107 (286)
331 2dvt_A Thermophilic reversible 36.0 81 0.0028 28.3 7.2 70 312-385 84-158 (327)
332 3vni_A Xylose isomerase domain 35.8 2.2E+02 0.0075 24.8 11.7 140 213-360 79-245 (294)
333 3txv_A Probable tagatose 6-pho 35.8 3.1E+02 0.011 26.5 12.4 122 234-381 40-207 (450)
334 3tva_A Xylose isomerase domain 35.7 2.2E+02 0.0075 24.8 15.2 97 225-325 101-209 (290)
335 1f75_A Undecaprenyl pyrophosph 35.4 1.6E+02 0.0056 26.0 8.7 106 227-352 52-165 (249)
336 3chv_A Prokaryotic domain of u 35.4 2.5E+02 0.0085 25.3 11.8 135 230-382 38-198 (284)
337 3i4e_A Isocitrate lyase; struc 35.4 3.1E+02 0.011 26.4 14.6 142 230-384 171-370 (439)
338 3inp_A D-ribulose-phosphate 3- 35.3 2.3E+02 0.0079 24.9 11.6 16 230-245 44-59 (246)
339 4aaj_A N-(5'-phosphoribosyl)an 35.2 71 0.0024 27.9 6.3 80 294-384 140-226 (228)
340 4do7_A Amidohydrolase 2; enzym 35.0 1.6E+02 0.0054 26.4 8.9 100 261-366 119-248 (303)
341 1s2w_A Phosphoenolpyruvate pho 34.9 1.6E+02 0.0056 26.6 8.9 69 226-308 170-239 (295)
342 3tjl_A NADPH dehydrogenase; OL 34.8 2.9E+02 0.0099 26.3 10.9 110 222-331 163-324 (407)
343 2yx0_A Radical SAM enzyme; pre 34.3 1.1E+02 0.0038 27.9 7.9 41 266-308 159-204 (342)
344 3dx5_A Uncharacterized protein 34.2 2.3E+02 0.0079 24.5 11.5 98 225-325 83-196 (286)
345 1i60_A IOLI protein; beta barr 34.2 2.2E+02 0.0076 24.3 10.8 155 225-383 83-270 (278)
346 3b0p_A TRNA-dihydrouridine syn 33.9 1.9E+02 0.0065 26.7 9.4 130 162-307 71-225 (350)
347 3q58_A N-acetylmannosamine-6-p 33.8 1.9E+02 0.0065 25.0 8.9 18 228-245 38-55 (229)
348 2p10_A MLL9387 protein; putati 33.4 33 0.0011 31.1 3.8 135 233-383 115-280 (286)
349 3fst_A 5,10-methylenetetrahydr 33.4 2.1E+02 0.0072 26.0 9.4 71 174-247 201-276 (304)
350 1zlp_A PSR132, petal death pro 33.3 1.7E+02 0.0059 26.9 8.8 67 225-308 188-258 (318)
351 1m5w_A Pyridoxal phosphate bio 33.2 97 0.0033 27.3 6.6 80 265-367 115-197 (243)
352 4dpp_A DHDPS 2, dihydrodipicol 33.1 1.8E+02 0.0062 27.2 9.1 40 228-271 143-182 (360)
353 1o4u_A Type II quinolic acid p 33.1 68 0.0023 29.1 5.9 64 230-308 204-269 (285)
354 3guw_A Uncharacterized protein 32.8 81 0.0028 28.0 6.4 90 263-366 109-211 (261)
355 2yyu_A Orotidine 5'-phosphate 32.7 2.5E+02 0.0084 24.4 10.3 79 298-382 154-236 (246)
356 2yw3_A 4-hydroxy-2-oxoglutarat 32.6 2.3E+02 0.0077 24.0 11.1 82 230-331 74-162 (207)
357 3fs2_A 2-dehydro-3-deoxyphosph 32.0 2.9E+02 0.01 25.1 10.7 126 238-379 71-209 (298)
358 3nqb_A Adenine deaminase 2; PS 32.0 1.2E+02 0.0042 30.4 8.3 89 264-363 202-293 (608)
359 4inf_A Metal-dependent hydrola 31.8 89 0.003 29.3 6.8 29 218-246 82-110 (373)
360 3tsm_A IGPS, indole-3-glycerol 31.8 2.8E+02 0.0095 24.7 10.5 120 234-379 137-267 (272)
361 3tml_A 2-dehydro-3-deoxyphosph 31.8 2.9E+02 0.0099 24.9 11.6 132 236-379 45-191 (288)
362 2i7g_A Monooxygenase, AGR_C_41 31.2 31 0.001 32.5 3.4 46 334-379 307-353 (376)
363 3feq_A Putative amidohydrolase 31.0 68 0.0023 29.9 5.9 70 232-304 178-249 (423)
364 2xn2_A Alpha-galactosidase; hy 31.0 1E+02 0.0036 31.9 7.6 51 230-287 354-417 (732)
365 2xz9_A Phosphoenolpyruvate-pro 30.8 1.2E+02 0.0042 27.9 7.4 85 261-352 231-323 (324)
366 3sgv_B Undecaprenyl pyrophosph 30.7 2.8E+02 0.0097 24.5 9.6 107 226-352 48-162 (253)
367 1f76_A Dihydroorotate dehydrog 30.5 1.5E+02 0.0052 27.0 8.1 30 279-308 211-246 (336)
368 1f76_A Dihydroorotate dehydrog 30.4 3.1E+02 0.011 24.9 10.3 78 229-308 228-319 (336)
369 3e49_A Uncharacterized protein 30.1 3.2E+02 0.011 24.9 14.5 68 230-307 36-113 (311)
370 2p10_A MLL9387 protein; putati 29.9 2.4E+02 0.0082 25.5 8.8 80 228-307 172-259 (286)
371 3ls9_A Triazine hydrolase; atr 29.9 1.3E+02 0.0045 28.2 7.8 57 329-385 172-232 (456)
372 1tvl_A Protein YTNJ; beta-alph 29.3 41 0.0014 32.7 4.0 41 333-380 364-404 (454)
373 3lab_A Putative KDPG (2-keto-3 29.2 1.2E+02 0.0041 26.3 6.6 81 231-331 77-170 (217)
374 2jwk_A Protein TOLR; periplasm 29.2 1.3E+02 0.0046 20.3 6.7 46 337-386 28-73 (74)
375 3sz8_A 2-dehydro-3-deoxyphosph 29.1 3.2E+02 0.011 24.6 11.1 86 261-359 78-167 (285)
376 2gwg_A 4-oxalomesaconate hydra 29.1 1.6E+02 0.0054 26.9 8.0 73 312-385 96-172 (350)
377 3lg3_A Isocitrate lyase; conse 29.0 3.9E+02 0.013 25.6 15.7 141 231-384 172-370 (435)
378 3dxi_A Putative aldolase; TIM 28.8 1.3E+02 0.0043 27.8 7.1 100 237-352 154-265 (320)
379 2hbv_A 2-amino-3-carboxymucona 28.8 1.3E+02 0.0046 27.2 7.4 67 313-385 105-171 (334)
380 1vcv_A Probable deoxyribose-ph 28.7 2.7E+02 0.0092 24.1 8.8 86 293-385 73-182 (226)
381 3gm8_A Glycoside hydrolase fam 28.6 2.7E+02 0.0091 29.1 10.3 46 338-384 368-415 (801)
382 1fvp_A Flavoprotein 390, FP390 28.6 28 0.00095 30.0 2.4 28 334-361 173-201 (231)
383 1yad_A Regulatory protein TENI 28.5 2.6E+02 0.009 23.4 12.6 73 232-320 35-109 (221)
384 3usb_A Inosine-5'-monophosphat 28.4 4.3E+02 0.015 25.8 13.0 95 230-330 197-306 (511)
385 2qul_A D-tagatose 3-epimerase; 27.9 2.9E+02 0.01 23.8 16.4 133 225-361 87-247 (290)
386 1k77_A EC1530, hypothetical pr 27.8 2.7E+02 0.0092 23.6 9.0 71 292-362 20-107 (260)
387 1luc_A Bacterial luciferase; m 27.6 27 0.00094 32.4 2.3 28 334-361 300-327 (355)
388 2isw_A Putative fructose-1,6-b 27.5 52 0.0018 30.5 4.1 121 209-353 150-302 (323)
389 1u83_A Phosphosulfolactate syn 27.5 3.4E+02 0.012 24.3 10.0 84 266-353 82-186 (276)
390 2qiw_A PEP phosphonomutase; st 27.4 1.8E+02 0.006 25.8 7.6 67 226-309 168-238 (255)
391 4f0r_A 5-methylthioadenosine/S 27.4 1.4E+02 0.0047 28.0 7.5 51 335-385 162-213 (447)
392 2qiw_A PEP phosphonomutase; st 27.3 2.9E+02 0.01 24.3 9.0 87 230-320 97-201 (255)
393 1h1y_A D-ribulose-5-phosphate 27.1 1.6E+02 0.0055 25.1 7.2 68 230-305 23-92 (228)
394 3be7_A Zn-dependent arginine c 27.1 1.7E+02 0.006 26.9 8.0 72 235-317 175-256 (408)
395 3paj_A Nicotinate-nucleotide p 27.1 1.3E+02 0.0045 27.7 6.7 54 311-379 240-294 (320)
396 3l0g_A Nicotinate-nucleotide p 27.0 1.4E+02 0.0047 27.3 6.8 10 180-189 101-110 (300)
397 1wzu_A Quinolinate synthetase 26.9 2.8E+02 0.0096 25.2 8.9 22 239-260 70-96 (300)
398 3m47_A Orotidine 5'-phosphate 26.7 3.1E+02 0.01 23.6 10.9 101 256-359 46-156 (228)
399 1yxy_A Putative N-acetylmannos 26.3 3E+02 0.01 23.3 11.2 79 230-329 40-140 (234)
400 2wm1_A 2-amino-3-carboxymucona 25.7 87 0.003 28.4 5.4 68 312-385 100-168 (336)
401 3ist_A Glutamate racemase; str 25.6 3.5E+02 0.012 23.9 9.3 62 239-306 30-97 (269)
402 1y0e_A Putative N-acetylmannos 25.5 3E+02 0.01 23.0 12.4 76 228-323 25-121 (223)
403 3sdo_A Nitrilotriacetate monoo 25.2 69 0.0024 31.1 4.8 42 334-381 371-412 (453)
404 3ks6_A Glycerophosphoryl diest 25.2 64 0.0022 28.3 4.2 49 267-317 194-242 (250)
405 3c8f_A Pyruvate formate-lyase 25.1 3E+02 0.01 22.9 13.4 114 239-385 69-191 (245)
406 2lnd_A De novo designed protei 25.1 1.9E+02 0.0066 20.7 7.1 26 328-353 77-103 (112)
407 3aty_A Tcoye, prostaglandin F2 25.0 4.3E+02 0.015 24.7 11.7 106 223-329 171-316 (379)
408 3lnp_A Amidohydrolase family p 24.7 1.8E+02 0.0061 27.5 7.7 51 335-385 184-240 (468)
409 1h5y_A HISF; histidine biosynt 24.6 3.2E+02 0.011 23.1 12.1 139 163-319 65-244 (253)
410 2hk0_A D-psicose 3-epimerase; 24.6 1.6E+02 0.0056 26.1 7.0 93 293-385 42-164 (309)
411 3hkx_A Amidase; alpha-beta-BET 24.5 2.3E+02 0.0079 25.0 8.0 46 231-276 45-95 (283)
412 2czd_A Orotidine 5'-phosphate 24.4 2.8E+02 0.0096 23.2 8.2 70 256-330 33-109 (208)
413 3ivz_A Nitrilase; alpha-beta s 24.3 2.7E+02 0.0091 24.1 8.3 46 231-276 26-79 (262)
414 4dnh_A Uncharacterized protein 24.3 1.1E+02 0.0039 28.3 5.6 60 221-289 132-193 (396)
415 1pii_A N-(5'phosphoribosyl)ant 24.0 2.7E+02 0.0091 26.9 8.7 126 230-380 168-302 (452)
416 3cny_A Inositol catabolism pro 23.9 3.5E+02 0.012 23.4 14.3 99 224-324 88-213 (301)
417 3sgz_A Hydroxyacid oxidase 2; 23.9 4.4E+02 0.015 24.4 11.0 62 268-330 207-282 (352)
418 3cqj_A L-ribulose-5-phosphate 23.8 3.6E+02 0.012 23.4 14.9 154 224-383 106-284 (295)
419 4dyk_A Amidohydrolase; adenosi 23.4 1.9E+02 0.0066 27.0 7.7 51 335-385 164-215 (451)
420 3cjp_A Predicted amidohydrolas 23.4 3.2E+02 0.011 23.4 8.7 66 312-385 77-144 (272)
421 2b7n_A Probable nicotinate-nuc 23.0 3.6E+02 0.012 23.9 8.9 61 233-308 196-258 (273)
422 2iw0_A Chitin deacetylase; hyd 22.8 2.3E+02 0.008 24.6 7.5 69 230-306 89-166 (254)
423 4dzh_A Amidohydrolase; adenosi 22.7 2.7E+02 0.0093 26.3 8.6 51 335-385 171-222 (472)
424 2nli_A Lactate oxidase; flavoe 22.6 2.5E+02 0.0085 26.2 8.0 62 267-329 218-293 (368)
425 3no5_A Uncharacterized protein 22.4 4.2E+02 0.014 23.6 13.3 138 229-383 33-195 (275)
426 2hjp_A Phosphonopyruvate hydro 21.9 2.2E+02 0.0077 25.6 7.3 69 226-308 166-236 (290)
427 3ceu_A Thiamine phosphate pyro 21.8 1.3E+02 0.0044 25.4 5.4 85 230-331 17-118 (210)
428 1rvg_A Fructose-1,6-bisphospha 21.8 40 0.0014 31.0 2.2 75 210-303 151-228 (305)
429 3hq1_A 2-isopropylmalate synth 21.7 5.8E+02 0.02 25.9 10.8 145 228-382 95-271 (644)
430 3apt_A Methylenetetrahydrofola 21.7 4.5E+02 0.015 23.7 9.8 71 174-247 198-273 (310)
431 2zvr_A Uncharacterized protein 21.5 3.5E+02 0.012 23.5 8.6 18 342-359 112-131 (290)
432 3hq1_A 2-isopropylmalate synth 21.5 2.7E+02 0.0092 28.3 8.3 88 226-319 226-331 (644)
433 3b9o_A Alkane monoxygenase; LA 21.5 94 0.0032 29.9 4.9 42 334-381 352-393 (440)
434 2qr6_A IMP dehydrogenase/GMP r 21.4 4.2E+02 0.014 24.6 9.5 85 213-308 140-240 (393)
435 1r30_A Biotin synthase; SAM ra 21.3 1.7E+02 0.0059 27.0 6.6 50 322-380 118-168 (369)
436 4fgs_A Probable dehydrogenase 21.2 4.1E+02 0.014 23.5 8.9 93 281-379 30-132 (273)
437 1gte_A Dihydropyrimidine dehyd 21.2 7.7E+02 0.026 26.3 15.2 76 230-306 652-734 (1025)
438 2r8c_A Putative amidohydrolase 21.1 1.4E+02 0.0049 27.8 6.1 51 335-385 171-228 (426)
439 1mzh_A Deoxyribose-phosphate a 21.1 3.9E+02 0.013 22.8 9.4 99 233-345 77-194 (225)
440 3lm3_A Uncharacterized protein 21.1 78 0.0027 29.1 3.8 65 312-379 95-162 (449)
441 1ujp_A Tryptophan synthase alp 20.9 2.5E+02 0.0087 24.9 7.4 56 230-300 110-167 (271)
442 3mz2_A Glycerophosphoryl diest 20.8 1.3E+02 0.0043 27.2 5.3 43 265-309 216-268 (292)
443 2hwg_A Phosphoenolpyruvate-pro 20.8 2.9E+02 0.0099 27.6 8.4 84 262-352 481-572 (575)
444 3vni_A Xylose isomerase domain 20.3 2.7E+02 0.0094 24.1 7.6 68 292-359 22-106 (294)
445 3hbl_A Pyruvate carboxylase; T 20.1 8.6E+02 0.03 26.5 13.3 141 225-383 554-732 (1150)
No 1
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=100.00 E-value=2.8e-78 Score=590.77 Aligned_cols=348 Identities=36% Similarity=0.647 Sum_probs=327.2
Q ss_pred CCCCCCchHHHHHHHcCCCCCCcccccchhhhhchHHHHHHHhccccHHHhhcCHHHHHHHhhhhHHHhCCCeeeecccc
Q 016596 38 PKNVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDI 117 (386)
Q Consensus 38 ~~~~~~~~ERv~aal~~e~~DRvPv~~~~~~g~~~~~y~~~~~~~~~~~e~~~d~e~~aea~~~~~~~f~~D~~~~~~d~ 117 (386)
..|++.|+||+++|++||++||+|||+|+|||+|+|+|+.++++..+|.|+|.|||+++|++++++++|++|++++++|+
T Consensus 4 ~~~~~~~~~r~l~al~ge~~dr~Pvw~mrqaGr~lpey~~~r~~~~~f~~~~~~pe~~ae~tl~~~~~~~~Da~i~fsDi 83 (368)
T 4exq_A 4 SMAQTLINDTFLRALLREPTDYTPIWLMRQAGRYLPEYNATRARAGSFLGLAKHPDYATEVTLQPLERFPLDAAILFSDI 83 (368)
T ss_dssp CSSSCBSCCHHHHHHTTCCCSSCCBCCTTSSSTTSHHHHHHHHHHSSHHHHHHSHHHHHHHHHHHHHHSCCSCEECCCCT
T ss_pred ccCCcccchHHHHHHcCCCCCCCCEEeeHhhhhccHHHHHHHhcCCCHHHHHcCHHHHHHHHHHHHHHhCCCEEEecccc
Confidence 45889999999999999999999999999999999999999988756999999999999999999999999999999999
Q ss_pred ccccccCCceEEecCCCCCccCCCCCChHHHhccCCCCCCCChhHHHHHHHHHHHHhCC-----ceeEEeecCcHHHHHH
Q 016596 118 LTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNN-----EAAVLGFVGAPFTLAS 192 (386)
Q Consensus 118 ~~~~e~~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~~~~~~~ea~~~l~~~~g~-----~~~v~~~~~gPft~a~ 192 (386)
.+++++||+++.|.++.+|++.+||++.+|+++|+.++++++++.++++++++++++++ ++|++|+++||||+++
T Consensus 84 ~~~~ea~G~~v~~~~~~gP~~~~pi~~~~d~~~l~~~~~~~~l~~v~eai~~l~~~l~~~~~~~~vpligf~gaP~Tla~ 163 (368)
T 4exq_A 84 LTIPDAMGLGLDFAAGEGPKFAHPVRTEADVAKLAVPDIGATLGYVTDAVREIRRALTDGEGRQRVPLIGFSGSPWTLAC 163 (368)
T ss_dssp THHHHHTTTCEEC----CCEESSCCCSHHHHHTCCCCCHHHHSHHHHHHHHHHHHHTBCTTSCBSSCEEEEEECHHHHHH
T ss_pred chhHHHcCCeEEeCCCCCCCCCCCCCCHHHHHhccCCChhHHHHHHHHHHHHHHHHhCCcCcccceeEEEeCCcHHHHHH
Confidence 99999999999999988998888999999999998887766899999999999999998 8999999999999999
Q ss_pred HHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHH
Q 016596 193 YVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDT 272 (386)
Q Consensus 193 ~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~ 272 (386)
++++|+++++|++++++|+++||.+|++|+++++.+++|+++++++|+|+|+++|+|+++|||++|+||++||+|++++.
T Consensus 164 ~l~~g~~s~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~y~~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~ 243 (368)
T 4exq_A 164 YMVEGGGSDDFRTVKSMAYARPDLMHRILDVNAQAVAAYLNAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQ 243 (368)
T ss_dssp HHHHTBCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHT
T ss_pred HHHcCCCcchHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHH
Confidence 99998788899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCC--CCcEEEEecCCcchHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHH
Q 016596 273 VKQTHP--DLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVR 350 (386)
Q Consensus 273 i~~~~~--~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~ 350 (386)
+++.++ ++|+++|+||...+++.+.++|+|++++|+.+|+.++++++|++++|+||+||..|+||+|+|+++|+++|+
T Consensus 244 l~~~~~g~~~pvi~f~~g~~~~l~~l~~~g~d~i~~d~~~dl~~ak~~~g~~~~l~Gnldp~~L~gt~e~I~~~v~~~l~ 323 (368)
T 4exq_A 244 LKREHDGARVPAIAFTKGGGLWLEDLAATGVDAVGLDWTVNLGRARERVAGRVALQGNLDPTILFAPPEAIRAEARAVLD 323 (368)
T ss_dssp SCCEETTEECCEEEEETTCGGGHHHHHTSSCSEEECCTTSCHHHHHHHHTTSSEEEEEECGGGGGSCHHHHHHHHHHHHH
T ss_pred HHHhcCCCCCcEEEEcCCcHHHHHHHHHhCCCEEeeCCCCCHHHHHHHhCCCEEEEECCCHHHhCCCHHHHHHHHHHHHH
Confidence 987532 378888888876679999999999999999999999999999999999999998779999999999999999
Q ss_pred HcC-CCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 351 KAG-RWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 351 ~~~-~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
.++ ++||||++||+++++||+||++||+++||+||
T Consensus 324 ~~g~~~g~I~n~Ghgi~p~tp~Env~a~veav~~~~ 359 (368)
T 4exq_A 324 SYGNHPGHVFNLGHGISQFTPPEHVAELVDEVHRHS 359 (368)
T ss_dssp HHCSCSCEEEEESSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred HhCCCCCEEEeCCCCCCCCcCHHHHHHHHHHHHHhC
Confidence 988 68999999999999999999999999999997
No 2
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=100.00 E-value=6e-74 Score=561.69 Aligned_cols=347 Identities=33% Similarity=0.590 Sum_probs=326.3
Q ss_pred CCCCCCchHHHHHHHcCCCCCCcccccchhhhhchHHHHHHHhccccHHHhhcCHHHHHHHhhhhHHHhCCCeeeecccc
Q 016596 38 PKNVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDI 117 (386)
Q Consensus 38 ~~~~~~~~ERv~aal~~e~~DRvPv~~~~~~g~~~~~y~~~~~~~~~~~e~~~d~e~~aea~~~~~~~f~~D~~~~~~d~ 117 (386)
++||+.++||+++|++||++||+|||+++|+|+|+|+|..++.+++ |.++|.||+++++++++++++|++|++++++|+
T Consensus 9 ~~Mt~~~~er~~~a~~ge~~dr~Pvw~mrqagr~lpey~~~~~~~~-~~e~~~~pe~~~e~~l~~~~~~~~D~~~~~~di 87 (367)
T 1r3s_A 9 QGFPELKNDTFLRAAWGEETDYTPVWCMRQAGRYLPEFRETRAAQD-FFSTCRSPEACCELTLQPLRRFPLDAAIIFSGI 87 (367)
T ss_dssp --CCCCSCCHHHHHHHTCCCSSCCBCCTTSSSTTSHHHHHHHHTSC-HHHHHTCHHHHHHHHHHHHHHSCCSCEECCCCT
T ss_pred hhcCcchhHHHHHHHcCCCCCCCceehhhhcCcccHHHHHHhcCCC-HHHHhCCHHHHHHHHHHHHHHhCCCEEEecccc
Confidence 5799999999999999999999999999999999999999998885 999999999999999999999999999999999
Q ss_pred ccccccCCceEEecCCCCCccCCCCCChHHHhccCCC-CCCCChhHHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHc
Q 016596 118 LTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREF-DPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVE 196 (386)
Q Consensus 118 ~~~~e~~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~-d~~~~~~~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~ 196 (386)
.+++++||+++.+.++.+|++.+||++.+|+++|+.+ ++.++++.++++++++++++++++|++++++||||++++++.
T Consensus 88 ~~~~~a~G~~~~~~~~~gP~~~~pi~~~~d~~~l~~~~~~~~~l~~v~eai~~l~~~~~~~~plig~~~~P~tla~~l~e 167 (367)
T 1r3s_A 88 LVVPQALGMEVTMVPGKGPSFPEPLREEQDLERLRDPEVVASELGYVFQAITLTRQRLAGRVPLIGFAGAPWTLMTYMVE 167 (367)
T ss_dssp THHHHHTTCCCEEETTTEEECSSCCCSGGGGGGSCCGGGHHHHTHHHHHHHHHHHHHHTTSSCEEEEEECHHHHHHHHHH
T ss_pred cccHHHcCCeEEeCCCCCCCcCCCCCCHHHHHhccCCCCchhhhhHHHHHHHHHHHHcCCCccEEEEcCcHHHHHHHHHc
Confidence 9999999999999988788888899999999999876 666789999999999999999889999999999999999996
Q ss_pred CCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHH-h
Q 016596 197 GGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVK-Q 275 (386)
Q Consensus 197 g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~-~ 275 (386)
||++++|++++++++++||.+|++|+++++.+++++++++++|+|+|+++|+|+++|||++|+||++||+|++++.++ +
T Consensus 168 gg~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~i~aGad~i~i~D~~~~~lsp~~f~ef~~p~~k~i~~~i~~~ 247 (367)
T 1r3s_A 168 GGGSSTMAQAKRWLYQRPQASHQLLRILTDALVPYLVGQVVAGAQALQLFESHAGHLGPQLFNKFALPYIRDVAKQVKAR 247 (367)
T ss_dssp SSCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCcccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhh
Confidence 666788999999999999999999999999999999999999999999999999999999999999999999999999 6
Q ss_pred hCC----CCcEEEEecCCcchHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHH
Q 016596 276 THP----DLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRK 351 (386)
Q Consensus 276 ~~~----~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~ 351 (386)
..+ ++|+++|+||+..+++.+.++|+|++++|+.+|+.++++++|++++++||+||..|.||+|+|+++|+++|+.
T Consensus 248 ~~~~g~~~~p~i~~~~G~~~~l~~l~~~g~d~i~~d~~~dl~~a~~~~g~~~~l~Gnldp~~L~gt~e~i~~~v~~~l~~ 327 (367)
T 1r3s_A 248 LREAGLAPVPMIIFAKDGHFALEELAQAGYEVVGLDWTVAPKKARECVGKTVTLQGNLDPCALYASEEEIGQLVKQMLDD 327 (367)
T ss_dssp HHHTTCCCCCEEEEETTCGGGHHHHTTSSCSEEECCTTSCHHHHHHHHCSSSEEEEEECGGGGGSCHHHHHHHHHHHHHH
T ss_pred hccccCCCCCeEEEcCCcHHHHHHHHhcCCCEEEeCCCCCHHHHHHHcCCCeEEEeCCChHHhcCCHHHHHHHHHHHHHH
Confidence 511 3789999999955899999999999999999999999999999999999999976799999999999999999
Q ss_pred cCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 352 AGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 352 ~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
++++||||++||+++++||+||++||++++++||
T Consensus 328 ~g~~g~I~~~ghgi~~~~p~env~a~v~~v~~~~ 361 (367)
T 1r3s_A 328 FGPHRYIANLGHGLYPDMDPEHVGAFVDAVHKHS 361 (367)
T ss_dssp HCSSSEEEEESSCCCTTCCHHHHHHHHHHHHHHH
T ss_pred hCCCCeeecCCCCCCCCCCHHHHHHHHHHHHHHH
Confidence 7667999999999999999999999999999986
No 3
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=100.00 E-value=6.9e-72 Score=544.91 Aligned_cols=345 Identities=38% Similarity=0.683 Sum_probs=321.6
Q ss_pred CCCCchHHHHHHHcCCCCCCcccccchhhhhchHHHHHHHhccccHHHhhcCHHHHHHHhhhhHHHhCCCeeeecccccc
Q 016596 40 NVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILT 119 (386)
Q Consensus 40 ~~~~~~ERv~aal~~e~~DRvPv~~~~~~g~~~~~y~~~~~~~~~~~e~~~d~e~~aea~~~~~~~f~~D~~~~~~d~~~ 119 (386)
|+++|+||+++|++||++||+|||+++|+|+|+|+|..++.++++|.+++.||+++++++++++++|++|++++++|+.+
T Consensus 1 ~~~~~~er~~~a~~g~~~dr~Pv~~mrqagr~~pey~~~~~~~~~~~~~~~~pe~~~e~~l~~~~~~~~D~~~~~~di~~ 80 (354)
T 3cyv_A 1 MTELKNDRYLRALLRQPVDVTPVWMMRQAGRYLPEYKATRAQAGDFMSLCKNAELACEVTLQPLRRYPLDAAILFSDILT 80 (354)
T ss_dssp --CCCCCHHHHHHTTCCCSSCCBCCTTCSSTTSHHHHHHHHHHSSHHHHTTCHHHHHHHHHTGGGTSCCSCEECCCCTTH
T ss_pred CCCCchHHHHHHHcCCCCCCCCeeehhhhccccHHHHHHHhccCCHHHHHcCHHHHHHHHHHHHHHhCCCEEeecccccc
Confidence 45678999999999999999999999999999999999998874599999999999999999999999999999999999
Q ss_pred ccccCCceEEecCCCCCccCCCCCChHHHhccCCCCCCCChhHHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCC
Q 016596 120 PLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGS 199 (386)
Q Consensus 120 ~~e~~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~~~~~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~ 199 (386)
++++||+++.+.++.+|++.+||++.+|+++|+++++.++++.++++++++++++++++|++++++||||+++++++|++
T Consensus 81 ~~~a~G~~~~~~~~~gp~~~~pi~~~~d~~~l~~~~~~~~~~~v~eai~~l~~~~~~~~plig~~~~P~tla~~l~~g~~ 160 (354)
T 3cyv_A 81 VPDAMGLGLYFEAGEGPRFTSPVTCKADVDKLPIPDPEDELGYVMNAVRTIRHELKGEVPLIGFSGSPWTLATYMVEGGS 160 (354)
T ss_dssp HHHTTTSCEEECSSSCEEESSCCCSHHHHHTCCCCCTTTTTHHHHHHHHHHHHHTTTSSCEEEEEECHHHHHHHHHHSSC
T ss_pred cHHHcCCeEEeCCCCCCccCCCCCCHHHHHhcCCCChhhhHHHHHHHHHHHHHHhCCCeeEEEeCCcHHHHHHHHhCCCC
Confidence 99999999999988789888899999999999866777899999999999999998889999999999999999998777
Q ss_pred chhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhC--
Q 016596 200 SKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTH-- 277 (386)
Q Consensus 200 ~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~-- 277 (386)
+++|++++++++++||.+|++++++++.+++++++++++|+|+|+++|+|++++||++|+||++||+|++++.+++.+
T Consensus 161 ~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~~~~ 240 (354)
T 3cyv_A 161 SKAFTVIKKMMYADPQALHALLDKLAKSVTLYLNAQIKAGAQAVMIFDTWGGVLTGRDYQQFSLYYMHKIVDGLLRENDG 240 (354)
T ss_dssp CSSCHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHSCSEETT
T ss_pred CccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCC
Confidence 889999999999999999999999999999999999999999999999999999999999999999999999999762
Q ss_pred CCCcEEEEecCCcc-hHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC-CC
Q 016596 278 PDLSLILYASGSGG-LLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG-RW 355 (386)
Q Consensus 278 ~~~~~~~H~cG~~~-~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~-~~ 355 (386)
++++ ++|.||+.. +++.+.++|+|++++|+.+|+.++++.+|++++++||+||..|.||+|+|+++|+++|+.++ ++
T Consensus 241 ~~~~-ii~~~~g~~~~l~~l~~~g~d~i~~d~~~dl~~~~~~~g~~~~l~Gn~dp~~l~~t~e~i~~~v~~~l~~~g~~~ 319 (354)
T 3cyv_A 241 RRVP-VTLFTKGGGQWLEAMAETGCDALGLDWTTDIADARRRVGNKVALQGNMDPSMLYAPPARIEEEVATILAGFGHGE 319 (354)
T ss_dssp EECC-EEEECTTTTTTHHHHHTTSCSEEECCTTSCHHHHHHHHTTTSEEECCBCGGGGGSCHHHHHHHHHHHHTTTTTSS
T ss_pred CCCC-EEEECCCHHHHHHHHHhcCCCEEEeCCCCCHHHHHHHhCCCeEEEecCChHHhCCCHHHHHHHHHHHHHHhCCCC
Confidence 1367 555566555 79999999999999999999999999999999999999997779999999999999999977 57
Q ss_pred CeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 356 KHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 356 g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
|||+++||+++++||+||+++|++++++||
T Consensus 320 g~I~~~g~gi~~~~p~env~a~v~~v~~~~ 349 (354)
T 3cyv_A 320 GHVFNLGHGIHQDVPPEHAGVFVEAVHRLS 349 (354)
T ss_dssp CEEBCBSSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CeEEecCCCCCCCCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999997
No 4
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=100.00 E-value=3.3e-71 Score=539.93 Aligned_cols=346 Identities=83% Similarity=1.335 Sum_probs=320.9
Q ss_pred CCCCCCchHHHHHHHcCCCCCCcccccchhhhhchHHHHHHHhccccHHHhhcCHHHHHHHhhhhHHHhCCCeeeecccc
Q 016596 38 PKNVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDI 117 (386)
Q Consensus 38 ~~~~~~~~ERv~aal~~e~~DRvPv~~~~~~g~~~~~y~~~~~~~~~~~e~~~d~e~~aea~~~~~~~f~~D~~~~~~d~ 117 (386)
+.||+ +||+++|++||++||+|||+|+|+|+|+|+|..++.++++|.+++.||+++++++++++++|++|++++++|+
T Consensus 7 ~~~t~--~er~~~a~~g~~~dr~Pv~~mrqagr~lpey~~~~~~~~~~~~~~~~pe~~~e~~l~~~~~~~~D~~~~~~di 84 (353)
T 1j93_A 7 AINAT--QPLLLDAVRGKEVERPPVWLMRQAGRYMKSYQLLCEKYPLFRDRSENVDLVVEISLQPWKVFRPDGVILFSDI 84 (353)
T ss_dssp ----C--CCHHHHHHHTCCCSSCCBCCSCCCTTTTTHHHHHHHSSCSTTTTTTCHHHHHHHHHHHHHHHCCSEEECCCCT
T ss_pred ccCCh--hHHHHHHHCCCCCCcCCeeehHhhccchHHHHHHHhccccHHHHhcCHHHHHHHHHHHHHHhCCCEEEecCCc
Confidence 55655 8999999999999999999999999999999999988845999999999999999999999999999999999
Q ss_pred ccccccCCceEEecCCCCCccCCCCCChHHHhccCCCCCCCChhHHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcC
Q 016596 118 LTPLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEG 197 (386)
Q Consensus 118 ~~~~e~~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~~~~~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g 197 (386)
.+++++||+++.+.++.+|++.+||++.+|+++|+++++.++++.++++++++++++++++|++++++||||+++++++|
T Consensus 85 ~~~~~a~G~~~~~~~~~gp~~~~pi~~~~d~~~l~~~~~~~~~~~v~e~~~~l~~~~~~~~~~~g~~~~P~tla~~l~~g 164 (353)
T 1j93_A 85 LTPLSGMNIPFDIIKGKGPVIFDPLRTAADVEKVREFIPEKSVPYVGEALTILRKEVNNQAAVLGFVGAPFTLASYVVEG 164 (353)
T ss_dssp TTHHHHTTCCEEEETTTEEEESSCCCSHHHHHHCCCCCHHHHCHHHHHHHHHHHHHHTTSSEEEEEEECHHHHHHHHHHS
T ss_pred ccCHHHcCCeEEecCCCCCeeCCCCCCHHHHHhcCCCChhhhHHHHHHHHHHHHHHhCCCceEEEecChHHHHHHHHHcC
Confidence 99999999999999888888888999999999998435456788999999999999988899999999999999999987
Q ss_pred CCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhC
Q 016596 198 GSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTH 277 (386)
Q Consensus 198 ~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~ 277 (386)
+++++|++++++++++||.+|++++++++.+++++++++++|+++|+++|+|++++||++|+||++||++++++.+++.+
T Consensus 165 ~~~~~~~~~~~~~~~~Pe~~~~ll~~l~~~~~~~~~~~~~aGad~iqi~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~~ 244 (353)
T 1j93_A 165 GSSKNFTKIKRLAFAEPKVLHALLQKFATSMAKYIRYQADSGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDSVKLTH 244 (353)
T ss_dssp BCCSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECGGGGGSCHHHHHHHTHHHHHHHHHHHHHHS
T ss_pred CCcccHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCcccccCCHHHHHHHhHHHHHHHHHHHHHhC
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999874
Q ss_pred CCCcEEEEecCCcc-hHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCC
Q 016596 278 PDLSLILYASGSGG-LLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK 356 (386)
Q Consensus 278 ~~~~~~~H~cG~~~-~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g 356 (386)
+++++ +|+||+.. +++.+.++|+|++++++.+|+.++++++|++++++||+||..|.||+|+|+++|+++++.++++|
T Consensus 245 ~~~~~-ih~c~g~~~~l~~l~~~g~d~~~~d~~~d~~~~~~~~g~~~~l~Gnldp~~l~~~~e~i~~~v~~~l~~~~~~g 323 (353)
T 1j93_A 245 PNLPL-ILYASGSGGLLERLPLTGVDVVSLDWTVDMADGRRRLGPNVAIQGNVDPGVLFGSKEFITNRINDTVKKAGKGK 323 (353)
T ss_dssp TTCCE-EEECSSCTTTGGGGGGGCCSEEECCTTSCHHHHHHHTCSSSEEECCBCGGGGGSCHHHHHHHHHHHHHHHCSSS
T ss_pred CCCCE-EEECCChHHHHHHHHhcCCCEEEeCCCCCHHHHHHHcCCCeEEEecCCHHHHcCCHHHHHHHHHHHHHHhCCCC
Confidence 34664 68898876 68999999999999999999999999999999999999996669999999999999999987679
Q ss_pred eEEecCCCCCCCCcHHHHHHHHHHHHhhcC
Q 016596 357 HILNLGHGIKVGTPEENVAHFFEVAKAIRY 386 (386)
Q Consensus 357 ~Ils~gc~i~~~tp~Eni~a~~~a~~~yg~ 386 (386)
|||++||+++++||+||+++|++++++|||
T Consensus 324 ~I~~~g~gi~~~~~~enl~a~ve~v~~~~~ 353 (353)
T 1j93_A 324 HILNLGHGIKVGTPEENFAHFFEIAKGLRY 353 (353)
T ss_dssp EEBCBSSCCCTTCCHHHHHHHHHHHHTCCC
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 999999999999999999999999999998
No 5
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=100.00 E-value=1.4e-70 Score=532.51 Aligned_cols=336 Identities=35% Similarity=0.662 Sum_probs=313.7
Q ss_pred CCCCchHHHHHHHcCCCCCCcccccchhhhhchHHHHHHHhccccHHHhhcCHHHHHHHhhhhHHHhCCCeeeecccccc
Q 016596 40 NVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILT 119 (386)
Q Consensus 40 ~~~~~~ERv~aal~~e~~DRvPv~~~~~~g~~~~~y~~~~~~~~~~~e~~~d~e~~aea~~~~~~~f~~D~~~~~~d~~~ 119 (386)
||+ +||+++|++||++||+|||+++|+|+|+|+|+.++.++++|.+++.||+++++++++++++|++|++++++|+.+
T Consensus 1 Mt~--~er~~~a~~g~~~dr~Pv~~mrqagr~lpe~~~~~~~~~~~~~~~~~pe~~~e~~~~~~~~~~~D~~~~~~di~~ 78 (338)
T 2eja_A 1 MPK--NDLLLRSLRGEPIGRFPVWLMRQAGRYMPEYRKIRNRVKNFLELCKNVDLATEISLLPLKILGVDAIIIFSDILV 78 (338)
T ss_dssp -CC--CCHHHHHHTTCCCSSCCBCCTTCSSTTSHHHHHHHTTSSSHHHHHHCHHHHHHHHHHHHHHHCCSCEECSCCTTG
T ss_pred CCc--hHHHHHHHcCCCCCCCCcchhhhhccccHHHHHHHhccccHHHHhCCHHHHHHHHHHHHHHhCCCEEEeccCcce
Confidence 555 899999999999999999999999999999999998884599999999999999999999999999999999999
Q ss_pred ccccCCceEEecCCCCCccCCCCCChHHHhccCCCCCCCChhHHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCC
Q 016596 120 PLSGMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGS 199 (386)
Q Consensus 120 ~~e~~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~~~~~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~ 199 (386)
++++||+++.+.++.+|.+ ++.+|+++|+++++ ++++.++++++++++++ +++|++++++||||+++++++||+
T Consensus 79 ~~~a~G~~~~~~~~~gP~i----~~~~d~~~l~~~~~-~~l~~v~eai~~l~~~~-~~~plig~~~~P~tla~~l~egg~ 152 (338)
T 2eja_A 79 PLEPLGVKVEFVEGEGPKL----SWSGKVSDLKKYDP-SQNAYVYEIIKRVKEAQ-DEVPVIGFAGAPFTLLSYLIEGGA 152 (338)
T ss_dssp GGGGGTCEEEEETTTEEEE----ECCSCGGGSCCCCG-GGGHHHHHHHHHHHHHC-CSSCEEEEEECHHHHHHHHHHTSC
T ss_pred eHHHcCCeEEeCCCCCCCC----CCHHHHHhcCCCCh-hhhHHHHHHHHHHHHHh-cCccEEEecchHHHHHHHHHcCCC
Confidence 9999999999988766654 78889999977666 78999999999999998 678999999999999999997666
Q ss_pred chhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCC
Q 016596 200 SKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD 279 (386)
Q Consensus 200 ~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~ 279 (386)
+++|++++++++++||.+|++++++++.+++++++++++|+|+|+++|+|+++|||++|+||++||+|++++.+++. +|
T Consensus 153 ~~~~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i~d~~~~~lsp~~f~ef~~p~~k~i~~~i~~~-~g 231 (338)
T 2eja_A 153 SKDFKSTKLFMWENPKEYKRLMDILTETVLAYLKEQIKAGADVVQIFDSWVNNLSLEDYGEYVYPYVNYLISELKDF-SD 231 (338)
T ss_dssp CSSCHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEETTGGGSCHHHHHHHTHHHHHHHHHHHHHH-CC
T ss_pred CccHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCccccCCHHHHHHHhHHHHHHHHHHHhhc-CC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999987 35
Q ss_pred CcEEEEecCCcchHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC-CCCeE
Q 016596 280 LSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG-RWKHI 358 (386)
Q Consensus 280 ~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~-~~g~I 358 (386)
+|+++|+||+..+++.+.++|+|++++|+.+|+.++++++ +++++||+||..|.||+|+|+++|+++|+.++ ++|||
T Consensus 232 ~~~i~~~~g~~~~l~~l~~~g~d~~~~d~~~dl~~~~~~~--~~~l~Gn~dp~~l~gt~e~i~~~v~~~l~~~g~~~g~I 309 (338)
T 2eja_A 232 TPVIYFFRGSSSFIDLAVDYRADALSVDWSVDIPELFKIY--DKGFQGNLEPAVLYASEEVIEEKTLGLLRRIPVKTRYV 309 (338)
T ss_dssp CCEEEEESSHHHHHHHHTTSCCSEEECCTTSCHHHHHHHC--CSEEECCBCGGGGGSCHHHHHHHHHHHHTTCCCSSSEE
T ss_pred CCEEEEcCCcHHHHHHHHHcCCCEEEeCCCCCHHHHHHhC--CeEEEECCCHHHhcCCHHHHHHHHHHHHHHhCCCCCeE
Confidence 7999999999557999999999999999999999999999 68999999997669999999999999999977 57999
Q ss_pred EecCCCCCCCCcHHHHHHHHHHHHhhcC
Q 016596 359 LNLGHGIKVGTPEENVAHFFEVAKAIRY 386 (386)
Q Consensus 359 ls~gc~i~~~tp~Eni~a~~~a~~~yg~ 386 (386)
|++||+++++||+||++||++++++||.
T Consensus 310 ~~~g~gi~~~~p~en~~a~v~~v~~~~~ 337 (338)
T 2eja_A 310 FNLGHGLAPDMELEKVKYLVDLVKSFPL 337 (338)
T ss_dssp BCBSSCCCTTSCHHHHHHHHHHHHTCCC
T ss_pred EeCCCCCCCCCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999984
No 6
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=5.9e-70 Score=532.05 Aligned_cols=338 Identities=34% Similarity=0.622 Sum_probs=317.8
Q ss_pred CchHHHHHHHcCCCCCCcccccchhhhhchHHHHHHHhccccHHHhhcCHHHHHHHhhhhHHHhCCCeeeeccccccccc
Q 016596 43 VAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDILTPLS 122 (386)
Q Consensus 43 ~~~ERv~aal~~e~~DRvPv~~~~~~g~~~~~y~~~~~~~~~~~e~~~d~e~~aea~~~~~~~f~~D~~~~~~d~~~~~e 122 (386)
+++||+++|++||++||+|||+++|+|+|+|+|..++.++ +|.++|.||+++++++++++++|++|++++++|+.++++
T Consensus 12 t~~er~~~al~g~~~dr~Pvw~mrqagr~lpey~~~~~~~-~~~~~~~~pe~~~e~~l~~~~~~~~D~~~~~~di~~~~~ 90 (359)
T 2inf_A 12 TFNETFLKAARGEKADHTPVWYMRQAGRSQPEYRKLKEKY-GLFEITHQPELCAYVTRLPVEQYGVDAAILYKDIMTPLP 90 (359)
T ss_dssp CCCCHHHHHHTTCCCSSCCBCCTTSSSTTSHHHHHHHHHH-HHHHHHHCHHHHHHHHHHHHHHHCCSCEECCCCTTTTGG
T ss_pred ChHHHHHHHHcCCCCCcCCEeehhhhCcccHHHHHHHcCC-CHHHHhCCHHHHHHHHHHHHHHhCCCEEEecccccccHH
Confidence 4589999999999999999999999999999999999888 499999999999999999999999999999999999999
Q ss_pred cCCceEEecCCCCCccCCCCCChHHHhccCCCCCCCChhHHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchh
Q 016596 123 GMNIPFDIIKGKGPVIFDPINTDAEVDQVREFDPEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKH 202 (386)
Q Consensus 123 ~~G~~~~~~~~~~p~~~~pi~~~eD~~~l~~~d~~~~~~~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~ 202 (386)
+||+++.+.++.+|++.+||++.+|+++|+++++.++++.++++++++++++ +++|++++++||||+++++++|+++++
T Consensus 91 a~G~~~~~~~~~gP~~~~pi~~~~d~~~l~~~~~~~~l~~~~ea~~~l~~~~-~~~~l~g~~~~P~tla~~l~~gg~s~~ 169 (359)
T 2inf_A 91 SIGVDVEIKNGIGPVIDQPIRSLADIEKLGQIDPEQDVPYVLETIKLLVNEQ-LNVPLIGFSGAPFTLASYMTEGGPSKN 169 (359)
T ss_dssp GGTCCEECCSSSCCEESSCCCSHHHHHTCCCCCHHHHSHHHHHHHHHHHHHT-CSSCEEEEEECHHHHHHHHHHCSCCSS
T ss_pred HcCCEEEecCCCCCCcCCCCCCHHHHHhcCCCCccchHHHHHHHHHHHHHHh-CCcceEEEcCcHHHHHHHHHcCCCccc
Confidence 9999999998888988889999999999976665668899999999999998 668999999999999999997666778
Q ss_pred HHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcE
Q 016596 203 FSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSL 282 (386)
Q Consensus 203 ~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~ 282 (386)
|++++++++++||.++++++++++.+++++++++++|+++|+++|+|++++||++|+||++||++++++.+++. ++++
T Consensus 170 ~~~~~~~~~~~Pe~~~~ll~~i~~~~~~~~~~~~~aGad~i~i~D~~~~~lsp~~f~ef~~p~~~~i~~~i~~~--g~~~ 247 (359)
T 2inf_A 170 YNKTKAFMYSMPDAWNLLMSKLADMIIVYVKAQIKAGAKAIQIFDSWVGALNQADYRTYIKPVMNRIFSELAKE--NVPL 247 (359)
T ss_dssp CHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTTCSEEEEECTTGGGSCHHHHHHHTHHHHHHHHHHHGGG--CSCE
T ss_pred HHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHc--CCcE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999987 5799
Q ss_pred EEEecCCcchHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCC-CeEEec
Q 016596 283 ILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRW-KHILNL 361 (386)
Q Consensus 283 ~~H~cG~~~~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~-g~Ils~ 361 (386)
++|+||+..+++.+.++|+|++++++.+|+.++++. |++++++||+||..|.||+|+|+++|+++++.+.++ ||||++
T Consensus 248 i~~~~G~~~~l~~l~~~g~d~~~~d~~~d~~~~~~~-g~~~~l~Gnldp~~l~~t~e~I~~~v~~~l~~~~~~~g~Il~~ 326 (359)
T 2inf_A 248 IMFGVGASHLAGDWHDLPLDVVGLDWRLGIDEARSK-GITKTVQGNLDPSILLAPWEVIEQKTKEILDQGMESDGFIFNL 326 (359)
T ss_dssp EEECTTCGGGHHHHHTSSCSEEECCTTSCHHHHHHT-TCCSEEECCBCGGGGGSCHHHHHHHHHHHHHHHTTSSCEEBCB
T ss_pred EEEcCCcHHHHHHHHHhCCCEEEeCCCCCHHHHHHc-CCCEEEEecCChHHhcCCHHHHHHHHHHHHHhCCCCCCeEEeC
Confidence 999999955899999999999999999999999999 999999999999666999999999999999994355 999999
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 362 GHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 362 gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
||+++++||+||+++|++++++|+
T Consensus 327 gcgi~~~~~~enl~a~ve~v~~~~ 350 (359)
T 2inf_A 327 GHGVFPDVSPEVLKKLTAFVHEYS 350 (359)
T ss_dssp SSCCCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCHHHHHHHHHHHHHhh
Confidence 999999999999999999999986
No 7
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=100.00 E-value=1.3e-67 Score=513.49 Aligned_cols=326 Identities=22% Similarity=0.327 Sum_probs=291.3
Q ss_pred CCCCCCchHHHHHHHcCCCCCCcccccchhhhhchHHHHHHHhccccHHHhhcCHHHHHHHhhhhHHHhCCCeeeecccc
Q 016596 38 PKNVSVAEPMLLKAVRGEDVERPPVWLMRQAGRYMKSYQIICEKYPSFRERSENVDLVVEISLQPWHVFKPDGVILFSDI 117 (386)
Q Consensus 38 ~~~~~~~~ERv~aal~~e~~DRvPv~~~~~~g~~~~~y~~~~~~~~~~~e~~~d~e~~aea~~~~~~~f~~D~~~~~~d~ 117 (386)
.+||+ |||+++|++||++||+|||+|+|+| +++|..++. . +|.|++.|||+++|++++++++|++|++++++|+
T Consensus 11 ~~MT~--kER~l~al~ge~~DR~Pvw~mrqag--~~e~~~~~~-~-~f~e~~~~pe~~ae~tl~~~~~~~~Da~iifsDi 84 (348)
T 4ay7_A 11 SEFTL--KTRLLAALKGEPVDKVPVCSVTQTG--IVELMDVVG-A-PWPEAHTNPELMAKLALANHELSGLEAVRLPYCL 84 (348)
T ss_dssp -CCCH--HHHHHHHHHTCCCSSCCBCCSSCCC--CHHHHHHHT-C-CTTHHHHCHHHHHHHHHHHHHTTCCSSEEECSCS
T ss_pred ccCCH--HHHHHHHHcCCCCCCCCEEechhhh--HHHHHHHhC-C-CHHHHhCCHHHHHHHHHHHHHHhCCCEEEecCcc
Confidence 46776 9999999999999999999999988 567777763 3 4999999999999999999999999999999999
Q ss_pred ccccccCCceEEec-CCCCCcc-CCCCCChHHHhccCCCC---CCCChhHHHHHHHHHHHHhCCceeEEeecCcHHHHHH
Q 016596 118 LTPLSGMNIPFDII-KGKGPVI-FDPINTDAEVDQVREFD---PEESVPYVGKALTILREEVNNEAAVLGFVGAPFTLAS 192 (386)
Q Consensus 118 ~~~~e~~G~~~~~~-~~~~p~~-~~pi~~~eD~~~l~~~d---~~~~~~~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~ 192 (386)
.+++++||+++.|. ++.+|.+ .+|+.+ |++.+..++ ..++++.++++++++++++++++|++|+++||||+++
T Consensus 85 l~~~ea~G~~v~~~~~~~~P~v~~~~~~~--~~~~~~~~~~~~~~~~l~~v~eai~~l~~~l~~~~pligf~g~P~Tla~ 162 (348)
T 4ay7_A 85 TVLVEAMGCEINMGTKNRQPSVTGHPYPK--DLEGAAVPADLLQRGRIPVVLEAIKIIREKVGPDVPIVGGMEGPVTVAS 162 (348)
T ss_dssp CHHHHHTTCEEECCBTTBCCEEEECSCSS--CCTTCCCCTTGGGSTTHHHHHHHHHHHHHHHCTTSCEEEEEECHHHHHH
T ss_pred ccchHHcCCeEEecCCCCCCccccCCCcc--hHHHhhCCccccchhhHHHHHHHHHHHHHHhCCCeeEEEeccchHHHHH
Confidence 99999999999995 4556754 566644 334444332 2578999999999999999999999999999999999
Q ss_pred HHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHH
Q 016596 193 YVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIV 270 (386)
Q Consensus 193 ~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~ 270 (386)
++++ .++++++++++||.++++|+++++.+++|+++++++|+|+|+++|+|++ +|||++|++|++||+|+++
T Consensus 163 ~l~~------~~~~~~~~~~~pe~~~~ll~~i~~~~~~~~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~ 236 (348)
T 4ay7_A 163 DLVS------VKSFMKWSIKKTDLLEQALDIATEASIIYANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFA 236 (348)
T ss_dssp HHHC------HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHH
T ss_pred hccc------chHHHHHHHHChHhHHHHHHHHHHHHHHHHHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHH
Confidence 9996 2356789999999999999999999999999999999999999999987 8999999999999999999
Q ss_pred HHHHhhCCCCcEEEEecCCcc-hHHHHHhcCCCEEEcCCCC-CHHHHHHHhCCCeeEEecCCcC-cc-CCCHHHHHHHHH
Q 016596 271 DTVKQTHPDLSLILYASGSGG-LLERLALTGVDVVSLDWTV-DMAEGRRRLGPDVAVQGNVDPG-AL-FGSKDFITNRIN 346 (386)
Q Consensus 271 ~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~d~l~~d~~~-dl~e~~~~~g~~~~l~G~vd~~-~l-~gt~eev~~~v~ 346 (386)
+.+++ ..++|+||++. .++.+.++|+|++++|+.+ ++.++|+.+|++++|+||+||. .| .||+|+|+++|+
T Consensus 237 ~~~~~-----~~iih~~g~~~~~l~~~~~~g~d~i~~d~~~~~~~~~k~~~g~~~~l~Gnldp~~~l~~g~~e~i~~~v~ 311 (348)
T 4ay7_A 237 SSVNS-----VTVLHICGNVNPILSDMADCGFEGLSVEEKIGSAKKGKEVIGTRARLVGNVSSPFTLLPGPVDKIKAEAK 311 (348)
T ss_dssp HHSSS-----EEEEECCSCCHHHHHHHHTSCCSEEECCGGGCCHHHHHHHHTTSSEEEEEECCCCCCTTCCHHHHHHHHH
T ss_pred hhccC-----CcEEEecCCcHHHHHHHHHhccccccccchhhHHHHHHHHhCCCEEEEcCCCChHhhcCCCHHHHHHHHH
Confidence 99963 45899999987 6899999999999999876 6999999999999999999986 45 899999999999
Q ss_pred HHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 347 DTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 347 ~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
++++ ++||||++||+++++||+||++||+++||+|.
T Consensus 312 ~~l~---~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~ 347 (348)
T 4ay7_A 312 EALE---GGIDVLAPGCGIAPMTPLENVKALVAARDEFY 347 (348)
T ss_dssp HHHH---TTCSEEEESSSCCTTCCHHHHHHHHHHHHHHT
T ss_pred HHHh---CCCCEEeCCCccCCCCCHHHHHHHHHHHHHhc
Confidence 9997 45899999999999999999999999999995
No 8
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=99.73 E-value=1.8e-17 Score=174.35 Aligned_cols=202 Identities=12% Similarity=0.134 Sum_probs=158.7
Q ss_pred HHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 016596 163 VGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQA 242 (386)
Q Consensus 163 ~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~ 242 (386)
..+.++.+++..+ .|+.+++.||+|++..+.+ + ++...+++++.+++.+.+.++.+.++|++.
T Consensus 524 ~ve~~~~l~~~t~--~pvK~~l~GP~Tl~~~~~~----r-----------~~~~~~el~~~lA~a~~~ei~~L~~aG~~~ 586 (755)
T 2nq5_A 524 TVEETVYAQSLTD--RPVKGMLTGPITITNWSFE----R-----------TDIPRDQLFNQIGLAIKDEIKLLENAGIAI 586 (755)
T ss_dssp SHHHHHHHHHTCS--SCBEEEEECHHHHHHHSBC----C-----------SSSCHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHhcC--CCeEEEecCHHHHHHHHhc----c-----------CcccHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 4566777777654 4778999999999988763 1 122567899999999999999999999999
Q ss_pred EEEecCCcC--C----CCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcc-hHHHHHhcCCCEEEcCCCC-CHH
Q 016596 243 VQIFDSWAT--E----LSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGG-LLERLALTGVDVVSLDWTV-DMA 313 (386)
Q Consensus 243 i~i~d~~~~--~----iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~-~l~~l~e~g~d~l~~d~~~-dl~ 313 (386)
|++-|+..+ + ++++.|.+++.+.++++++.+.. +..+.+|+| |+.. .++.+.++++|+++++... |++
T Consensus 587 IQiDEP~l~~~l~~~~~~~~~~~~~av~~l~~~~~~v~~---~~~i~~HiC~G~~~~i~~~L~~~~aD~islE~~rsd~e 663 (755)
T 2nq5_A 587 IQVDEAALREGLPLRKSKQKAYLDDAVHAFHIATSSVKD---ETQIHTHMCYSKFDEIIDAIRALDADVISIETSRSHGD 663 (755)
T ss_dssp EEEEECCHHHHSCSSHHHHHHHHHHHHHHHHHHHSSSCT---TSEEEEEECCSCCSTTHHHHHHHCCSEEEC--------
T ss_pred EEEcCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEEeccCCcHHHHHHHHhCCCCEEEEecCCCCHH
Confidence 999887532 2 56789999999999999988754 457899999 9887 6899999999999998543 666
Q ss_pred HHHHHhC---CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHH---HHHHHHHHHHhh
Q 016596 314 EGRRRLG---PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEE---NVAHFFEVAKAI 384 (386)
Q Consensus 314 e~~~~~g---~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~E---ni~a~~~a~~~y 384 (386)
.++.... ++.++.|+||+... .+|+|+|++.++++++..+..+++++|+||+...++.+ ++++|+++++++
T Consensus 664 ~L~~~~~~~~~~~v~lGvvd~~s~~ve~~eeV~~ri~~a~~~v~~e~l~lsPdCGl~t~t~~e~~~kL~~mveaA~~v 741 (755)
T 2nq5_A 664 IIESFETAVYPLGIGLGVYDIHSPRVPTKEEVVANIERPLRQLSPTQFWVNPDCGLKTRQEPETIAALKVLVAATKEV 741 (755)
T ss_dssp -----------CEEEEECSCTTSSCCCCHHHHHHHHHGGGGSSCGGGEEEECSSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhccCCCeEEEeeccCccCCCCCHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 6665431 46789999999876 89999999999999998776689999999999988884 999999999875
No 9
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=99.72 E-value=3.4e-17 Score=172.75 Aligned_cols=202 Identities=12% Similarity=0.091 Sum_probs=166.9
Q ss_pred HHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 016596 163 VGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQA 242 (386)
Q Consensus 163 ~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~ 242 (386)
..+.++.+++..+ .|+.+++.||+|++..+.+ + ++...+++++.+++.+.+.++.+.++|++.
T Consensus 539 ~ve~~~~l~~~~~--~pvK~~l~GP~Tl~~~~~~----r-----------~~~~~~~l~~~lA~a~~~ev~~L~~aG~~~ 601 (765)
T 1u1j_A 539 TVFWSAMAQSMTS--RPMKGMLTGPVTILNWSFV----R-----------NDQPRHETCYQIALAIKDEVEDLEKGGIGV 601 (765)
T ss_dssp STHHHHHHTTSCS--SCBEEEEECHHHHHHTSEE----C-----------TTSCHHHHHHHHHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHHhc--CCeEEEecCHHHHHHHHhc----c-----------CcCcHHHHHHHHHHHHHHHHHHHHHcCCCE
Confidence 3456666666543 4778999999999877763 1 122567899999999999999999999999
Q ss_pred EEEecCCcC--C----CCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcc-hHHHHHhcCCCEEEcCCCC-CHH
Q 016596 243 VQIFDSWAT--E----LSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGG-LLERLALTGVDVVSLDWTV-DMA 313 (386)
Q Consensus 243 i~i~d~~~~--~----iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~-~l~~l~e~g~d~l~~d~~~-dl~ 313 (386)
|++-|+..+ + ++++.|.+++.+.++++++.+.. +..+.+|+| |+.. .++.+.++++|+++++... |++
T Consensus 602 IQiDEP~l~~~l~~~~~~~~~~~~~av~~~~~~~~~v~~---~~~i~~HiC~G~~~~i~~~l~~~~~D~islE~~rs~~e 678 (765)
T 1u1j_A 602 IQIDEAALREGLPLRKSEHAFYLDWAVHSFRITNCGVQD---STQIHTHMCYSHFNDIIHSIIDMDADVITIENSRSDEK 678 (765)
T ss_dssp EEEECTTSSTTCCSSGGGHHHHHHHHHHHHHHHHTTSCS---SSEEEEECSCSCCTTTHHHHHTTCCSEEECCBSSSCTT
T ss_pred EEECCCcccccccccCCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEEeccCCcHHHHHHHHhCCCCEEEEeCCCCCHH
Confidence 999887543 3 67899999999999999998854 457899999 9887 6899999999999998543 776
Q ss_pred HHHHHh---C-CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHH---HHHHHHHHHHhh
Q 016596 314 EGRRRL---G-PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEE---NVAHFFEVAKAI 384 (386)
Q Consensus 314 e~~~~~---g-~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~E---ni~a~~~a~~~y 384 (386)
.++... + ++.++.|+||+... .+|+|+|++.++++++..+..+++++|+||+...++.+ +|++|+++++++
T Consensus 679 ~L~~~~~~~~~~~~v~lGvvd~~s~~ve~~eev~~ri~~a~~~v~~e~l~lsPdCGl~t~t~~e~~~kL~~mveaA~~v 757 (765)
T 1u1j_A 679 LLSVFREGVKYGAGIGPGVYDIHSPRIPSSEEIADRVNKMLAVLEQNILWVNPDCGLKTRKYTEVKPALKNMVDAAKLI 757 (765)
T ss_dssp GGGGGTTTTCCCSEECCBSSCTTSSSCCTHHHHHHHHHHHHHSSCSTTBCBBCSSCSSSSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhccCCCeEEEeecCCccCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 666643 2 56888999999876 79999999999999998876789999999999988884 999999999875
No 10
>1ypx_A Putative vitamin-B12 independent methionine synth protein; alpha-beta protein; 2.60A {Listeria monocytogenes}
Probab=99.68 E-value=2.2e-16 Score=153.94 Aligned_cols=206 Identities=16% Similarity=0.126 Sum_probs=160.3
Q ss_pred HHHHHHHHHHHhCCcee-EEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 016596 163 VGKALTILREEVNNEAA-VLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQ 241 (386)
Q Consensus 163 ~~ea~~~l~~~~g~~~~-v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d 241 (386)
..+.++.+++..++ .| +.+++.||+|++..+.. .+++ | ++.++++++.+++.+.+.++.+.++|++
T Consensus 116 ~~~~~~~l~~~~~~-~~~vK~~l~gP~tl~~~~~~---~~~~-------Y--~~~~~~l~~~la~a~~~ei~~l~~aG~~ 182 (375)
T 1ypx_A 116 FIEDFIFLKEAVGD-NHVAKQTIPSPAMLHYRGDI---EYQP-------Y--LDDAEKFANDLATAYQKAIQAFYDAGCR 182 (375)
T ss_dssp HHHHHHHHHHHHCS-SSEECEEEECTHHHHHHEEE---CSHH-------H--HHCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHhcC-CCceEEecCCHHHHHHHHhc---chhh-------c--cChHHHHHHHHHHHHHHHHHHHHHCCCC
Confidence 66777888887654 35 58899999999987653 2222 2 2445889999999999999999999999
Q ss_pred EEEEecCCc-CCC-------------CHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-----------CCcc-hHHH
Q 016596 242 AVQIFDSWA-TEL-------------SPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-----------GSGG-LLER 295 (386)
Q Consensus 242 ~i~i~d~~~-~~i-------------Sp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-----------G~~~-~l~~ 295 (386)
.|++-|+.. .++ +++.|.+++.+.++++++.+.+ +..+.+|+| |+.. .++.
T Consensus 183 ~IQiDeP~l~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~n~~~~~~~~---~~~i~~HiC~gn~~s~~~~~g~~~~i~~~ 259 (375)
T 1ypx_A 183 YLQLDDTSWSYLCSDEQREVVRQRGFDPETLQETYKNLINEAIKHKPA---DMVITMHICRGNFRSTWIAEGGYGPVAET 259 (375)
T ss_dssp EEEEEECHHHHTTSCC--------CCSTTTHHHHHHHHHHHHTTTCCT---TCEEEEEECCC----------CCSGGGHH
T ss_pred EEEecCCchhhhhccchhcccccccCCHHHHHHHHHHHHHHHHhcCCC---CCeEEEEEeccccCCccccccchHHHHHH
Confidence 999988743 244 6788999999999999887754 357899999 4555 6899
Q ss_pred HH-hcCCCEEEcCC---CC-CHHHHHHHhC-CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCC--
Q 016596 296 LA-LTGVDVVSLDW---TV-DMAEGRRRLG-PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIK-- 366 (386)
Q Consensus 296 l~-e~g~d~l~~d~---~~-dl~e~~~~~g-~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~-- 366 (386)
+. ++++|+++++. .. +++.+++.-. ++.++.|.||+... ..|+|+|++.++++++..+...++++|+||+.
T Consensus 260 l~~~~~~d~i~lE~~~~r~g~~e~L~~~~~~~~~v~lGvvd~~~~~~e~~e~v~~ri~~a~~~v~~e~l~lsPdCGl~s~ 339 (375)
T 1ypx_A 260 LFGKLNIDGFFLEYDNERSGDFAPLKYVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQCGFAST 339 (375)
T ss_dssp HHTTCCCSEEEEECCSCC---CCTTCCCCCTTCEEEEEEECSSSCC-CCSHHHHHHHHHHHHHSCGGGEEEEESSCCC--
T ss_pred HHhhCCCCEEEEEecCCCCCcHHHHHHhhhcCCeEEEeeecCcCCCCCCHHHHHHHHHHHHHhcCccceEecCCCCcccc
Confidence 98 99999999973 23 4444444222 56889999999876 79999999999999999875689999999999
Q ss_pred ----CCCc---HHHHHHHHHHHHhh
Q 016596 367 ----VGTP---EENVAHFFEVAKAI 384 (386)
Q Consensus 367 ----~~tp---~Eni~a~~~a~~~y 384 (386)
.-++ .++|++|++++++.
T Consensus 340 ~~g~~~t~~~a~~kL~~~v~~A~~~ 364 (375)
T 1ypx_A 340 EEGNILTEEEQWDKLRYVVRLANDI 364 (375)
T ss_dssp ------CHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCHHHHHHHHHHHHHHHHHH
Confidence 7888 88999999999874
No 11
>3rpd_A Methionine synthase (B12-independent); structural genomics, PSI-biology, midwest center for structu genomics, MCSG, rossmann fold, Zn, TRA; HET: MSE; 1.50A {Shewanella SP}
Probab=99.57 E-value=3.9e-14 Score=136.74 Aligned_cols=196 Identities=11% Similarity=0.169 Sum_probs=153.1
Q ss_pred HHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 016596 165 KALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQ 244 (386)
Q Consensus 165 ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~ 244 (386)
+.++.+++..+ .|+.+++.||.|++..... + .|.+. .++++.+.+.+.+.++.+.++|++.|+
T Consensus 127 ~~~~~~~~~t~--~~vK~~lpgP~t~~~~~~~----~--------~y~~~---~e~~~dlA~a~~~ei~~l~~aG~~~IQ 189 (357)
T 3rpd_A 127 EDAKFLRKQTT--QPIKWALPGPMTMIDTLYD----D--------HYKSR---EKLAWEFAKILNEEAKELEAAGVDIIQ 189 (357)
T ss_dssp HHHHHHHHHCS--SCBEEEEECHHHHHTSSEE----S--------SSCCH---HHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHhhcc--CCceEEeCCHHHHHHHhhh----c--------cCCCH---HHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 44555665543 5788999999998643321 1 13332 477888899999999999999999999
Q ss_pred EecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-C------------------Ccc-hHHHHHhcCCCEE
Q 016596 245 IFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-G------------------SGG-LLERLALTGVDVV 304 (386)
Q Consensus 245 i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G------------------~~~-~l~~l~e~g~d~l 304 (386)
+-||.-+. .++.|.++..+.++++++.+. ..+.+|+| | ... +++.+.++++|++
T Consensus 190 iDeP~l~~-~~~~~~~~~v~~~n~~~~~~~-----~~~~iHiC~G~~~~~n~d~~~t~~~~~g~y~~i~~~l~~~~~D~i 263 (357)
T 3rpd_A 190 FDEPAFNV-FFDEVNDWGIACLERAIEGLK-----CETAVHICYGYGIKANTDWKKTLGSEWRQYEEVFPKLQKSNIDII 263 (357)
T ss_dssp EECGGGGT-CHHHHHHTHHHHHHHHHTTCC-----SEEEEEECSCCSSHHHHHHHTTSCSCCCGGGGTHHHHHHSSCCEE
T ss_pred ecCccccc-cHHHHHHHHHHHHHHHHhCCC-----CceEEEEecCCccCCccccccccccccCcHHHHHHHHHhCCCCEE
Confidence 98875432 367888888888888887664 35678999 3 334 5789999999999
Q ss_pred EcCCCC---CHHHHHHHhCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCc---HHHHHHH
Q 016596 305 SLDWTV---DMAEGRRRLGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTP---EENVAHF 377 (386)
Q Consensus 305 ~~d~~~---dl~e~~~~~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp---~Eni~a~ 377 (386)
+++... ++ ++.+.+.++.+..|.||+... ..|+|+|++.++++++..+....+++|+||+.+-++ .+++++|
T Consensus 264 ~lE~~~~r~~~-e~l~~~~~k~v~lGvvd~~s~~ve~~eev~~ri~~a~~~v~~~~l~lsPdCGl~~~~~~~a~~kL~~m 342 (357)
T 3rpd_A 264 SLECHNSHVPM-ELLELIRGKKVMVGAIDVATDTIETAEEVADTLRKALKFVDADKLYPCTNCGMTPLSHQVTRGKLNAL 342 (357)
T ss_dssp EECCTTCCCCG-GGGGGGTTSEEEEECSCTTCSSCCCHHHHHHHHHHHHTTSCGGGEEEECSSCCTTSCHHHHHHHHHHH
T ss_pred EEEecCCCCCh-HHHHhcCCCEEEeccccCcCCCCCCHHHHHHHHHHHHHhCCcccEEEeCCCCCCCCCHHHHHHHHHHH
Confidence 998643 33 556677888899999999765 799999999999999988767899999999987777 5799999
Q ss_pred HHHHHhh
Q 016596 378 FEVAKAI 384 (386)
Q Consensus 378 ~~a~~~y 384 (386)
+++++..
T Consensus 343 v~aa~~~ 349 (357)
T 3rpd_A 343 SAGAEIV 349 (357)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9998864
No 12
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=99.39 E-value=2e-12 Score=134.31 Aligned_cols=200 Identities=14% Similarity=0.159 Sum_probs=145.5
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
++.++.+++ +++ .|+.+.+.||+|++..... . ++...+++++.+.+.+.+.++.+.++|++.|
T Consensus 544 lde~~~Aks-l~~-~pvK~~LtGPvTlL~ls~~---r------------~d~~r~ell~dLA~ayreeI~~L~~AGa~~I 606 (766)
T 1t7l_A 544 LKEITYAQS-LTE-KPVKGMLTGPVTIMSWSYY---R------------EDIPEREIAYQIALAINEEVKDLEEAGIKIV 606 (766)
T ss_dssp HHHHHHHHH-TCS-SCBEEEEECHHHHHHTSEE---C------------SSSCHHHHHHHHHHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHH-hcC-CCeEEEEeCHHHHHHHhhc---c------------CCCCHHHHHHHHHHHHHHHHHHHHHcCCCEE
Confidence 556666655 454 4678899999998765432 1 1123468899999999999999999999999
Q ss_pred EEecCCcC-CCCH-----HHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcc-hHHHHHhcCCCEEEcCCCC---CH
Q 016596 244 QIFDSWAT-ELSP-----VDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGG-LLERLALTGVDVVSLDWTV---DM 312 (386)
Q Consensus 244 ~i~d~~~~-~iSp-----~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~-~l~~l~e~g~d~l~~d~~~---dl 312 (386)
+|-||.-. .+++ +.+.+++.+.+++. +.+.. +..+.+|+| |+.. .++.+.++++|++++|..- ++
T Consensus 607 QIDEPaL~~~L~~~~~d~~~~l~~a~~aln~a-~gv~~---~~~I~lH~C~G~~~di~~~L~~l~VD~IsLE~~Rs~~el 682 (766)
T 1t7l_A 607 QIDEPAFREKAPIKKSKWPEYFEWAINAFNLA-ANARP---ETQIHAHMCYSDFNEIIEYIHQLEFDVISIEASRSKGEI 682 (766)
T ss_dssp EEECTHHHHTSCSSGGGHHHHHHHHHHHHHHH-TCCCT---TSEEEEECCCSCCTTTHHHHTTSCCSEEEEECTTTTTGG
T ss_pred EEcCCcccccCCCcchhHHHHHHHHHHHHHHh-hcCCC---CceEEEEEecCchHHHHHHHHcCCCCEEEEecCCCchhH
Confidence 99887532 3332 34445555554444 33322 357889999 7776 6899999999999998532 22
Q ss_pred HHHHHHh-C-CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcH---HHHHHHHHHHHhh
Q 016596 313 AEGRRRL-G-PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPE---ENVAHFFEVAKAI 384 (386)
Q Consensus 313 ~e~~~~~-g-~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~---Eni~a~~~a~~~y 384 (386)
.+..+.+ + ++....|.||.... ..++|++.+.++++++..+...++++|+|++..-++. ++++.|++++++.
T Consensus 683 L~~l~~~p~~~k~L~lGVVD~rn~~ved~EeI~~rI~~a~~~Vg~erL~VsPdCGL~~~p~~e~~~kLk~mvaaAkev 760 (766)
T 1t7l_A 683 ISAFENFKGWIKQIGVGVWDIHSPAVPSINEMREIVERVLRVLPKELIWINPDCGLKTRNWDEVIPSLRNMVALAKEM 760 (766)
T ss_dssp GHHHHTSTTCCSEEEEECSCTTSCSCCCHHHHHHHHHHHTTTSCGGGEEEECSSCCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhccccCCeEEEEEECCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2333323 2 36788999999777 8999999999999998776457999999999876666 7899999988874
No 13
>1u1j_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; methionine, synthase, methyltetrahydrofolate; HET: C2F; 2.40A {Arabidopsis thaliana} SCOP: c.1.22.2 c.1.22.2 PDB: 1u1h_A* 1u1u_A 1u22_A*
Probab=99.33 E-value=1.5e-11 Score=129.68 Aligned_cols=185 Identities=11% Similarity=0.060 Sum_probs=139.7
Q ss_pred hHHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCH-H-HHHHHHHHHHHHHHHHHHHHHHh
Q 016596 161 PYVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQP-K-VLHALLRKFTTSMAKYVQYQADN 238 (386)
Q Consensus 161 ~~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~P-e-~v~~ll~~~~~~~~~~~~~~~e~ 238 (386)
...++.++.+++. | +++...+.||+|++ +++ + ...+.+ + ..+++++.+++.+.++++.+.++
T Consensus 135 ~~~l~~~~~ak~~-g--~~~K~~l~GP~Tll--~l~----k-------~~~~~~~~~~~~~ll~~L~~~y~~~l~~L~~a 198 (765)
T 1u1j_A 135 HKAVNEYKEAKAL-G--VDTVPVLVGPVSYL--LLS----K-------AAKGVDKSFELLSLLPKILPIYKEVITELKAA 198 (765)
T ss_dssp CHHHHHHHHHHHT-T--CCCEEEEECHHHHH--HTC----E-------ECTTCCTTCCGGGGHHHHHHHHHHHHHHHHHT
T ss_pred cchHHHHHHHHhc-C--CCceEEECCHHHHH--Hhh----h-------cccccCccCCHHHHHHHHHHHHHHHHHHHHHc
Confidence 3567778777654 4 55677889999998 332 1 001112 2 35688999999999999999999
Q ss_pred CCCEEEEecCC-cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcc--hHHHHHhcC-CCEEEcCCCC---
Q 016596 239 GAQAVQIFDSW-ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGG--LLERLALTG-VDVVSLDWTV--- 310 (386)
Q Consensus 239 G~d~i~i~d~~-~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~--~l~~l~e~g-~d~l~~d~~~--- 310 (386)
|++.|++-||. +..++++. .+.+.+.++.+.+.+. +.++.+|+| |+.. .++.+.++| ++++++|...
T Consensus 199 G~~~VQiDEP~L~~~l~~~~-~~~~~~a~~~l~~~~~----~~~i~lhtc~G~~~~~~~~~l~~l~~vd~l~lD~v~~~~ 273 (765)
T 1u1j_A 199 GATWIQLDEPVLVMDLEGQK-LQAFTGAYAELESTLS----GLNVLVETYFADIPAEAYKTLTSLKGVTAFGFDLVRGTK 273 (765)
T ss_dssp TCCEEEEECGGGGSCCCHHH-HHHHHHHHHHSTTTTC----SSEEEEECCSSCCCHHHHHHHTTCTTCCEEEEESSSCTT
T ss_pred CCCEEEEcCCccccCCCHHH-HHHHHHHHHHHHhhcC----CCeEEEEeCCCCcchHHHHHHHcCCCCcEEEEEecCCcc
Confidence 99999998875 45677754 5555555555443221 357899999 7776 489999999 9999998532
Q ss_pred CHHHHHHHhC-CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCC
Q 016596 311 DMAEGRRRLG-PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIK 366 (386)
Q Consensus 311 dl~e~~~~~g-~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~ 366 (386)
+++.+++.++ ++..++|.||...+ ..+++++.+.++++.+..+....+++|+|++.
T Consensus 274 ~l~~l~~~l~~~k~L~lGvVdgrni~~~d~e~v~~~l~~~~~~lg~~~l~lspsCgL~ 331 (765)
T 1u1j_A 274 TLDLVKAGFPEGKYLFAGVVDGRNIWANDFAASLSTLQALEGIVGKDKLVVSTSCSLL 331 (765)
T ss_dssp HHHHHHHCCCSSCEEEEEEECSSSCBCCCHHHHHHHHHHHHHHCCSSCEEEEESSCGG
T ss_pred cHHHHHHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHHhcCCCcEEEcCCCCcc
Confidence 4777777676 67899999998777 89999999999999998764569999999986
No 14
>2nq5_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; structural genomics, target 6426D, PSI; 1.90A {Streptococcus mutans} PDB: 3l7s_A 3l7r_A 3t0c_A
Probab=99.31 E-value=1.9e-11 Score=128.59 Aligned_cols=178 Identities=11% Similarity=0.042 Sum_probs=136.7
Q ss_pred HHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q 016596 162 YVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQ 241 (386)
Q Consensus 162 ~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d 241 (386)
..++.++..++.+| +++.+.+.||+|++....+ ++ .++++++.+++...++++.+.++|++
T Consensus 136 ~~l~~~~eA~~~~g--~~vK~vl~GP~Tla~l~k~----------------~~-~~~dll~~L~~~y~~~l~~L~~~Ga~ 196 (755)
T 2nq5_A 136 RLLDLYLEAREVVG--DKAKPVITGPITYVALSTG----------------VE-DFTAAVKSLLPLYKQVFTELVKAGAS 196 (755)
T ss_dssp HHHHHHHHHHHHHG--GGEEEEEECHHHHHHTCBS----------------CS-CHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred hHHHHHHHHHHhcC--CCcEEEEccHHHHHHHhcC----------------Cc-HHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 45556665565555 5678889999998863210 11 24588999999999999999999999
Q ss_pred EEEEecCCc-CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-cCCcchHHHHHhcCCCEEEcCCCC----CHHHH
Q 016596 242 AVQIFDSWA-TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-SGSGGLLERLALTGVDVVSLDWTV----DMAEG 315 (386)
Q Consensus 242 ~i~i~d~~~-~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-cG~~~~l~~l~e~g~d~l~~d~~~----dl~e~ 315 (386)
.|++.+|.. .-++++ +.+.+.+.++++...+. +.++++|+ ||+...++.+.++|++++++|... +++.+
T Consensus 197 ~VQiDEP~L~~dl~~~-~~~~~~~ay~~l~~~~~----~~~v~lhtyfG~~~~~~~l~~l~vd~l~lD~v~~~~~~l~~l 271 (755)
T 2nq5_A 197 YIQVDEPIFVTDEGKD-YLQAAKAVYAYFAKEVP----DAKFIFQTYFEGLIDSQVLSQLPVDAFGLDFVYGLEENLEAI 271 (755)
T ss_dssp EEEEECGGGGSSGGGG-GHHHHHHHHHHHHHHST----TCEEEEECCSSCCTTHHHHTTSSCSEEEEESSSSHHHHHHHH
T ss_pred EEEEeCCcccCCCCHH-HHHHHHHHHHHHHhccc----CCcEEEEEeCCChHHHHHHHhCCCCEEEEEecCCChhhHHHH
Confidence 999988764 345555 88888888888875431 24677787 888656799999999999998543 23466
Q ss_pred HHHhC-CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 316 RRRLG-PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 316 ~~~~g-~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
++.++ ++...+|.||...+ .++++++.+.++++++. ....+++|+|++
T Consensus 272 ~~~~~~~k~L~~GvVdgrniw~~d~e~v~~~l~~~~~~--~~~l~vsPsCsL 321 (755)
T 2nq5_A 272 KTGAFKGKEIFAGVIDGRNIWSSDFVKTSALLETIEEQ--SAALTIQPSCSL 321 (755)
T ss_dssp HTTTTTTSEEEEEEECTTSCBCCCHHHHHHHHHHHHHT--SSEEEEEESSCG
T ss_pred HHhcCCCCEEEEEeeCCcccCCCCHHHHHHHHHHHHhh--cCCEEEcCCCCc
Confidence 66676 67899999998777 89999999999999986 446999999996
No 15
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=99.18 E-value=8e-11 Score=122.83 Aligned_cols=199 Identities=15% Similarity=0.129 Sum_probs=129.5
Q ss_pred HHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 016596 165 KALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQ 244 (386)
Q Consensus 165 ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~ 244 (386)
+-++.+++..+ .|+-+++.||.|++..... +. +.+ ..++++.+...+.+.++.+.++|++.|+
T Consensus 572 ~~~~~~qs~t~--~pvK~~L~gP~ti~~~s~~----r~--------~~~---~ee~~~dlA~A~r~Ei~~L~~AG~r~IQ 634 (789)
T 3ppg_A 572 KESVYAQSITS--KPMKGMLTGPVTILRWSFP----RD--------DVS---GKIQALQLGLALRDEVNDLEGAGITVIQ 634 (789)
T ss_dssp HHHHHHHHTCS--SCBEEEEECHHHHHHTSBC----CS--------SSC---HHHHHHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhhcc--CCCceeccchHhHhhhhcc----cc--------CCC---HHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 33445555433 3678889999998755431 11 111 2578888999999999999999999999
Q ss_pred EecCCc-CC------CCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcchHHHHHhcCCCEEEcCC--CCCHHH
Q 016596 245 IFDSWA-TE------LSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGGLLERLALTGVDVVSLDW--TVDMAE 314 (386)
Q Consensus 245 i~d~~~-~~------iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~~l~~l~e~g~d~l~~d~--~~dl~e 314 (386)
+-|+.- .. .+++.|.++....+++.++.+.. +..+.+|+| |+... +.+.++++|+++++. ..+.+.
T Consensus 635 iDEPal~e~l~~r~g~d~~~~l~~av~a~n~a~~g~p~---d~~I~tHiC~Gnf~~-~~I~~l~aD~islE~~~Rs~~e~ 710 (789)
T 3ppg_A 635 VDEPAIREGLPLRAGKERSDYLNWAAQSFRVATSGVEN---STQIHSHFCYSDLDP-NHIKALDADVVSIEFSKKDDPNY 710 (789)
T ss_dssp EECTTTGGGSCSSSSHHHHHHHHHHHHHHHHHHSSSCT---TSEEEEECC---CCH-HHHHHHCCSEEEEC---------
T ss_pred EcccchhhcccccccCCHHHHHHHHHHHHHHHHhcCCC---CcEEEEeccCCCCCh-hHHHhCCCCEEEEecCCCcchHH
Confidence 988643 11 23444555555555555554432 345789999 88766 888899999999983 223322
Q ss_pred HHHHh-CCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCc---HHHHHHHHHHHHhh
Q 016596 315 GRRRL-GPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTP---EENVAHFFEVAKAI 384 (386)
Q Consensus 315 ~~~~~-g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp---~Eni~a~~~a~~~y 384 (386)
++..- .++.+..|.||...- ..|+|+|.+.+++.++..+....+++|+||+.+-++ .+++++|+++++..
T Consensus 711 L~~~~~~~k~V~lGVvds~sp~vEs~EeV~~rI~~a~~~v~~erL~lsPdCGl~t~~~~~a~akL~~mveaAk~l 785 (789)
T 3ppg_A 711 IQEFSEYPNHIGLGLFDIHSPRIPSKQEFVSRIEEILKVYPASKFWVNPDCGLKTRGWPEVKESLTNMVEAAKEF 785 (789)
T ss_dssp CGGGGGCCSEEEEC-------CCCCHHHHHHHHHHHTTTSCGGGEEECCSCC---CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeEEeeeecCCCCCCCCHHHHHHHHHHHHHhcCcccEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 22111 246788999998765 799999999999999988767899999999976665 67888899988764
No 16
>3ppg_A 5-methyltetrahydropteroyltriglutamate--homocystei methyltransferase; cobalamin-independent, surface entropy reduction; 1.98A {Candida albicans} PDB: 3ppf_A 3pph_A 3ppc_A
Probab=97.53 E-value=0.00054 Score=71.75 Aligned_cols=146 Identities=18% Similarity=0.145 Sum_probs=108.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCEEEEecCCc-CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEE-EEecCCcc-hHHH
Q 016596 219 ALLRKFTTSMAKYVQYQADNGAQAVQIFDSWA-TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLI-LYASGSGG-LLER 295 (386)
Q Consensus 219 ~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~-~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~-~H~cG~~~-~l~~ 295 (386)
++++.+.+...+.++.+.++|+.-|++-+|.- .-++++ +.+.+...+.+|.. .. ...++ ...+|+.. .++.
T Consensus 213 ~lL~~Ll~~Y~~~l~~L~~~G~~wVQiDEP~Lv~dl~~~-~~~~~~~aY~~L~~----~~-~~kill~TYFg~~~~~l~~ 286 (789)
T 3ppg_A 213 SLLPKILPVYKELLQKLKEAGAEQVQIDEPVLVLDLPEA-VQSKFKEAYDALVG----AD-VPELILTTYFGDVRPNLKA 286 (789)
T ss_dssp GGHHHHHHHHHHHHHHHHHHTCCEEEEECGGGGSCCCHH-HHTHHHHHHHHHCS----TT-SCEEEEECCSSCCGGGHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCEEEeeCCeeecCCCHH-HHHHHHHHHHHHhh----CC-CCCEEEECCCCCHHHHHHH
Confidence 46788888888888889999999999988763 345544 34444444444433 11 22333 35688876 6899
Q ss_pred HHhcCCCEEEcCCC---CCHHHHHHHhC-CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC---CC
Q 016596 296 LALTGVDVVSLDWT---VDMAEGRRRLG-PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGI---KV 367 (386)
Q Consensus 296 l~e~g~d~l~~d~~---~dl~e~~~~~g-~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i---~~ 367 (386)
+.++|++++++|.. .++..+.+.++ +++...|-||-... ..+.+++.+.++++.+..+....+++|+|++ |.
T Consensus 287 l~~lpV~gl~lDlv~~~~~l~~v~~~~~~~k~L~aGvVdGRNiWr~dl~~~l~~l~~l~~~lg~~~l~vspScSLlHvP~ 366 (789)
T 3ppg_A 287 IENLPVAGFHFDFVRVPEQLDEVASILKDGQTLSAGVVDGRNIWKTDFAKASAVVQKAIEKVGKDKVVVATSSSLLHTPV 366 (789)
T ss_dssp HTTCCCSEEEEETTTCGGGHHHHHHTCCTTCEEEEEEECSSCCBCCCHHHHHHHHHHHHHHHCGGGEEEEESSCGGGSCS
T ss_pred HHcCCCcEEEEEccCCcchHHHHHhhcCCCCeEEEEEecCCccccCCHHHHHHHHHHHHHhcCCCeEEEeCCCCCCCCCc
Confidence 99999999999864 36777777675 46777899998776 8999999999999998876468999999996 55
Q ss_pred CCc
Q 016596 368 GTP 370 (386)
Q Consensus 368 ~tp 370 (386)
+..
T Consensus 367 ~l~ 369 (789)
T 3ppg_A 367 DLE 369 (789)
T ss_dssp CGG
T ss_pred ccc
Confidence 543
No 17
>1t7l_A 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase; TIM barrel, methyltetrahydrofolate, zinc; 2.00A {Thermotoga maritima} PDB: 3bq5_A 3bq6_A 1xdj_A 1xr2_A* 1xpg_A*
Probab=96.56 E-value=0.037 Score=57.78 Aligned_cols=141 Identities=11% Similarity=0.137 Sum_probs=100.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcchHH
Q 016596 217 LHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGGLLE 294 (386)
Q Consensus 217 v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~~l~ 294 (386)
+..+++.+.....+.++.+.++|+.-|++-+|.-. -+++ .+.+.+...+.++ . +..+++.+- |+...++
T Consensus 202 ~~~~l~~l~~~y~~~l~~l~~~g~~~vq~dep~l~~d~~~-~~~~~~~~~y~~l----~----~~~~~~~tyf~~~~~~~ 272 (766)
T 1t7l_A 202 MEKLLESLVSVYKEVFEKLVENGCKEILVNEPAFVCDLEK-AHWDLILNVYREL----S----EFPLTVFTYYDSVSDYE 272 (766)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCEEEECGGGGSCCBH-HHHHHHHHHHHTT----T----TSCEEEECCSSCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCEEEecCCeeecCCCH-HHHHHHHHHHHHh----c----CCcEEEECCcCCHHHHH
Confidence 34889999999999999999999999999887643 3444 4566666666665 1 235566543 5544689
Q ss_pred HHHhcCCCEEEcCCCC---CHHHHHH-HhC-CCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC---
Q 016596 295 RLALTGVDVVSLDWTV---DMAEGRR-RLG-PDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGI--- 365 (386)
Q Consensus 295 ~l~e~g~d~l~~d~~~---dl~e~~~-~~g-~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i--- 365 (386)
.+.++|++++++|-.- ++..+.+ .++ +++...|-||-... ..+.++..+.++++.+ .+++|+|++
T Consensus 273 ~~~~l~v~~~~~d~v~~~~~~~~~~~~~~~~~~~l~~Gvvdgrniw~~d~~~~~~~~~~~~~------~~~~~s~sllh~ 346 (766)
T 1t7l_A 273 ACVSLPVKRLHFDFVSNEENLKNLEKHGFPEDKKLVAGVINGRQPWKVDLRKVASLVEKLGA------SAISNSCPLFHL 346 (766)
T ss_dssp HHHTSSCSEEEEECSSCSHHHHHHHHHCCCTTSEEEEEEECSSCCBCCCHHHHHHHHHHHTC------SEEEESSCGGGS
T ss_pred HHHcCCCcEEEEEecCCHHHHHHHHhccCCCCceEEEEEecCcchhhcCHHHHHHHHHHhhe------EEEECCcCCeec
Confidence 9999999999997542 4566666 365 67777888898776 7888777666664432 899999996
Q ss_pred CCCCcHH
Q 016596 366 KVGTPEE 372 (386)
Q Consensus 366 ~~~tp~E 372 (386)
|.+...|
T Consensus 347 p~~~~~e 353 (766)
T 1t7l_A 347 PVTLELE 353 (766)
T ss_dssp CSCSTTC
T ss_pred ccccccc
Confidence 5554443
No 18
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=95.93 E-value=0.11 Score=48.65 Aligned_cols=151 Identities=15% Similarity=0.143 Sum_probs=92.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH-HhCCCEEEEec----CCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC
Q 016596 214 PKVLHALLRKFTTSMAKYVQYQA-DNGAQAVQIFD----SWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG 288 (386)
Q Consensus 214 Pe~v~~ll~~~~~~~~~~~~~~~-e~G~d~i~i~d----~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG 288 (386)
|+.+.+.++...+-..++++.++ +.|||.|-+.. +.+.-+|++.+.+. ++.+.+.. ++|+.+--||
T Consensus 68 ~~~v~~~~~~~~~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~--------V~~v~~~~-~vPlsIDg~~ 138 (323)
T 4djd_D 68 PDVLKDPFTDVINEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVAT--------VKEVLQAV-GVPLVVVGCG 138 (323)
T ss_dssp CHHHHGGGTTTTTCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHH--------HHHHHHHC-CSCEEEECCS
T ss_pred hhhHHHHHHHHHHhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHH--------HHHHHhhC-CceEEEECCC
Confidence 44455554444445677888888 89999999863 22347899886664 33333332 6899999999
Q ss_pred Ccc-h---HHHHHhcCCC---EE-EcCCC--CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC--CCC
Q 016596 289 SGG-L---LERLALTGVD---VV-SLDWT--VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--RWK 356 (386)
Q Consensus 289 ~~~-~---l~~l~e~g~d---~l-~~d~~--~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~--~~g 356 (386)
|.+ . ++.-++.|.+ ++ ++... ..+..+..++|-.+++|...| . ++.++..+.+...| ...
T Consensus 139 ~~T~~~eV~eaAleagag~~~lINsv~~~~~~~m~~laa~~g~~vVlmh~~d-------~-~~~~~l~~~a~~~GI~~e~ 210 (323)
T 4djd_D 139 DVEKDHEVLEAVAEAAAGENLLLGNAEQENYKSLTAACMVHKHNIIARSPLD-------I-NICKQLNILINEMNLPLDH 210 (323)
T ss_dssp CHHHHHHHHHHHHHHTTTSCCEEEEEBTTBCHHHHHHHHHHTCEEEEECSSC-------H-HHHHHHHHHHHTTTCCGGG
T ss_pred CCCCCHHHHHHHHHhcCCCCCeEEECCcccHHHHHHHHHHhCCeEEEEccch-------H-HHHHHHHHHHHHcCCCHHH
Confidence 975 2 4555666744 44 34322 346777788988777776332 1 33333344445555 468
Q ss_pred eEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 357 HILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 357 ~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
.||-||.+ |.++..|.-...++..+
T Consensus 211 IIlDPg~g-~fgk~~e~~l~~l~~ir 235 (323)
T 4djd_D 211 IVIDPSIG-GLGYGIEYSFSIMERIR 235 (323)
T ss_dssp EEEECCCC-CTTTTHHHHHHHHHHHH
T ss_pred EEEeCCCc-cccCCHHHHHHHHHHHH
Confidence 99999988 33333343334444444
No 19
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=95.81 E-value=0.36 Score=44.19 Aligned_cols=145 Identities=13% Similarity=0.058 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhc--CCCE
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALT--GVDV 303 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~--g~d~ 303 (386)
+...+.++.+++.|||.|-+.-.+ +.+.=.+-+.|..+.+.+.. ++|+.+-+. +...++.-.+. |.++
T Consensus 34 ~~a~~~a~~~v~~GAdiIDIg~~s----~~~eE~~rv~~vi~~l~~~~-----~~pisIDT~-~~~v~~aal~a~~Ga~i 103 (271)
T 2yci_X 34 RPIQEWARRQAEKGAHYLDVNTGP----TADDPVRVMEWLVKTIQEVV-----DLPCCLDST-NPDAIEAGLKVHRGHAM 103 (271)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCS----CSSCHHHHHHHHHHHHHHHC-----CCCEEEECS-CHHHHHHHHHHCCSCCE
T ss_pred HHHHHHHHHHHHCCCCEEEEcCCc----CchhHHHHHHHHHHHHHHhC-----CCeEEEeCC-CHHHHHHHHHhCCCCCE
Confidence 445567778999999999886544 22222334555555554432 467666544 22346666677 9999
Q ss_pred EE-cCCCC----CHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHc---C--CCCeEEecCCCCCCCCcHHH
Q 016596 304 VS-LDWTV----DMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKA---G--RWKHILNLGHGIKVGTPEEN 373 (386)
Q Consensus 304 l~-~d~~~----dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~---~--~~g~Ils~gc~i~~~tp~En 373 (386)
++ +.... .+..+.+++|-.+++|- .|....-.|.+++.+..++.++.+ | ....|+-||.+....+...|
T Consensus 104 INdvs~~~d~~~~~~~~~a~~~~~vv~m~-~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilDPg~gfigk~~~~~ 182 (271)
T 2yci_X 104 INSTSADQWKMDIFFPMAKKYEAAIIGLT-MNEKGVPKDANDRSQLAMELVANADAHGIPMTELYIDPLILPVNVAQEHA 182 (271)
T ss_dssp EEEECSCHHHHHHHHHHHHHHTCEEEEES-CBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEECCCCCTTTSTHHH
T ss_pred EEECCCCccccHHHHHHHHHcCCCEEEEe-cCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEecCCCccccCHHHH
Confidence 95 54332 35666677887666664 333333346788888888877765 3 24699999998644455555
Q ss_pred HHHHHHHHH
Q 016596 374 VAHFFEVAK 382 (386)
Q Consensus 374 i~a~~~a~~ 382 (386)
+ .+++..+
T Consensus 183 ~-~~l~~l~ 190 (271)
T 2yci_X 183 V-EVLETIR 190 (271)
T ss_dssp H-HHHHHHH
T ss_pred H-HHHHHHH
Confidence 4 3444443
No 20
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=95.55 E-value=0.94 Score=41.90 Aligned_cols=148 Identities=16% Similarity=0.185 Sum_probs=94.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecC----CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDS----WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~----~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~ 301 (386)
+..++.++.+++.|||.|-+.-. .+..+|++.=-+-+.|..+.+.+.+ ++|+.+.+.- ...++.-.+.|+
T Consensus 63 ~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~-----~vpiSIDT~~-~~V~~aAl~aGa 136 (297)
T 1tx2_A 63 DAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV-----KLPISIDTYK-AEVAKQAIEAGA 136 (297)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS-----CSCEEEECSC-HHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC-----CceEEEeCCC-HHHHHHHHHcCC
Confidence 44556677899999999998752 2347888766666777777766543 4788777652 224566667799
Q ss_pred CEEE-cCC---CCCHHHHHHHhCCCeeEEecC-CcCccCCCHHHHHHHHHHHHHHc---C--CCCeEEecCCCCCCCCcH
Q 016596 302 DVVS-LDW---TVDMAEGRRRLGPDVAVQGNV-DPGALFGSKDFITNRINDTVRKA---G--RWKHILNLGHGIKVGTPE 371 (386)
Q Consensus 302 d~l~-~d~---~~dl~e~~~~~g~~~~l~G~v-d~~~l~gt~eev~~~v~~~i~~~---~--~~g~Ils~gc~i~~~tp~ 371 (386)
++++ +.. ...+.++.+++|-.+++|-.- .|. .....+++.+..++.++.+ | ....||-||.+. ..+..
T Consensus 137 ~iINdvsg~~~d~~m~~~aa~~g~~vVlmh~~G~p~-y~d~v~ev~~~l~~~i~~a~~~GI~~~~IilDPg~Gf-gk~~~ 214 (297)
T 1tx2_A 137 HIINDIWGAKAEPKIAEVAAHYDVPIILMHNRDNMN-YRNLMADMIADLYDSIKIAKDAGVRDENIILDPGIGF-AKTPE 214 (297)
T ss_dssp CEEEETTTTSSCTHHHHHHHHHTCCEEEECCCSCCC-CSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-SCCHH
T ss_pred CEEEECCCCCCCHHHHHHHHHhCCcEEEEeCCCCCC-cchHHHHHHHHHHHHHHHHHHcCCChhcEEEeCCCCc-CCCHH
Confidence 9995 322 234666677788777776531 121 1123567777777766654 3 247999999887 44556
Q ss_pred HHHHHHHHHHH
Q 016596 372 ENVAHFFEVAK 382 (386)
Q Consensus 372 Eni~a~~~a~~ 382 (386)
.|+ .+++..+
T Consensus 215 ~n~-~ll~~l~ 224 (297)
T 1tx2_A 215 QNL-EAMRNLE 224 (297)
T ss_dssp HHH-HHHHTGG
T ss_pred HHH-HHHHHHH
Confidence 666 4444333
No 21
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=95.52 E-value=1.4 Score=40.33 Aligned_cols=149 Identities=15% Similarity=0.202 Sum_probs=95.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEec-C---CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFD-S---WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d-~---~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~ 301 (386)
+..++.++.+++.|||.|-++- + .+..+|++.=.+-+.|..+.+.+.. ++|+.+++-. ...++.-.+.|+
T Consensus 38 ~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~-----~~piSIDT~~-~~va~aAl~aGa 111 (282)
T 1aj0_A 38 IDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF-----EVWISVDTSK-PEVIRESAKVGA 111 (282)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC-----CCEEEEECCC-HHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc-----CCeEEEeCCC-HHHHHHHHHcCC
Confidence 4455667779999999999875 3 2347888776666777777766543 4687776632 224566677799
Q ss_pred CEEE-cCC--CCCHHHHHHHhCCCeeEEecC-CcCcc-----CCC-HHHHHHHHHHHHHHc---C--CCCeEEecCCCCC
Q 016596 302 DVVS-LDW--TVDMAEGRRRLGPDVAVQGNV-DPGAL-----FGS-KDFITNRINDTVRKA---G--RWKHILNLGHGIK 366 (386)
Q Consensus 302 d~l~-~d~--~~dl~e~~~~~g~~~~l~G~v-d~~~l-----~gt-~eev~~~v~~~i~~~---~--~~g~Ils~gc~i~ 366 (386)
++++ +.. ...+.++.+++|-.+++|-.- .|..+ +.+ .+|+.+..++.++.+ | ....||-||.+.
T Consensus 112 ~iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf- 190 (282)
T 1aj0_A 112 HIINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGF- 190 (282)
T ss_dssp CEEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS-
T ss_pred CEEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCc-
Confidence 9995 332 346777788888878886531 12222 122 356666666666554 3 247999999887
Q ss_pred CCCcHHHHHHHHHHHH
Q 016596 367 VGTPEENVAHFFEVAK 382 (386)
Q Consensus 367 ~~tp~Eni~a~~~a~~ 382 (386)
..+...|+ .+++..+
T Consensus 191 ~k~~~~n~-~ll~~l~ 205 (282)
T 1aj0_A 191 GKNLSHNY-SLLARLA 205 (282)
T ss_dssp SCCHHHHH-HHHHTGG
T ss_pred ccCHHHHH-HHHHHHH
Confidence 44566665 4444433
No 22
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=94.67 E-value=1.6 Score=40.67 Aligned_cols=145 Identities=12% Similarity=0.140 Sum_probs=83.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC---cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSW---ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~---~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~ 301 (386)
+..++.++.+++.|||.|-++-.+ +..+|++.--+-+.|..+.+.+.+ +++++.+ +-... .++.-.+.|+
T Consensus 65 ~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~----~~vpISI--DT~~~~VaeaAl~aGa 138 (318)
T 2vp8_A 65 AAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAY----PDQLISV--DTWRAQVAKAACAAGA 138 (318)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHS----TTCEEEE--ECSCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhC----CCCeEEE--eCCCHHHHHHHHHhCC
Confidence 345556677999999999887422 146887776667777777766543 2355444 32222 4677777899
Q ss_pred CEEE-cC--CCCCHHHHHHHhCCCeeEEec--CCcCccCC------CHHHHHHHH----HHHHHHc---C--CCCeEEec
Q 016596 302 DVVS-LD--WTVDMAEGRRRLGPDVAVQGN--VDPGALFG------SKDFITNRI----NDTVRKA---G--RWKHILNL 361 (386)
Q Consensus 302 d~l~-~d--~~~dl~e~~~~~g~~~~l~G~--vd~~~l~g------t~eev~~~v----~~~i~~~---~--~~g~Ils~ 361 (386)
++++ +. ....+.++.+++|-.+++|-. ..|..+.. ++++|.+++ ++.++.+ | ....||-|
T Consensus 139 ~iINDVsg~~d~~m~~vaa~~g~~vVlmh~~G~~p~tmq~~~~y~~~~~dv~~ev~~~l~~~i~~a~~aGI~~~~IilDP 218 (318)
T 2vp8_A 139 DLINDTWGGVDPAMPEVAAEFGAGLVCAHTGGALPRTRPFRVSYGTTTRGVVDAVISQVTAAAERAVAAGVAREKVLIDP 218 (318)
T ss_dssp CEEEETTSSSSTTHHHHHHHHTCEEEEECC-------------CCSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEET
T ss_pred CEEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccccccccccccHHHHHHHHHHHHHHHHHHcCCChhhEEEcC
Confidence 9995 32 234677788888877777653 31433311 124444443 3444433 3 24799999
Q ss_pred CCCCCCCCcHHHHHHH
Q 016596 362 GHGIKVGTPEENVAHF 377 (386)
Q Consensus 362 gc~i~~~tp~Eni~a~ 377 (386)
|.+.. .+...|+..+
T Consensus 219 G~GF~-Kt~~~nl~ll 233 (318)
T 2vp8_A 219 AHDFG-KNTFHGLLLL 233 (318)
T ss_dssp TTTCC-TTSHHHHHHH
T ss_pred CCCcc-cCHHHHHHHH
Confidence 99985 4667776443
No 23
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=93.78 E-value=3.9 Score=37.34 Aligned_cols=143 Identities=16% Similarity=0.129 Sum_probs=83.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCC----cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSW----ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVD 302 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~----~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d 302 (386)
..++.++.+++.|||.|-++-.+ +..+|++.=-+-+.|..+.+.+ . ++|+.+++-. ...++.-.+.|++
T Consensus 30 ~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~----~--~~piSIDT~~-~~va~aAl~aGa~ 102 (280)
T 1eye_A 30 DAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAA----Q--GITVSIDTMR-ADVARAALQNGAQ 102 (280)
T ss_dssp HHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHH----T--TCCEEEECSC-HHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhc----C--CCEEEEeCCC-HHHHHHHHHcCCC
Confidence 34466677999999999887522 2356766555556677666654 2 4677776632 2245666778999
Q ss_pred EEE-cCC---CCCHHHHHHHhCCCeeEEecC-CcCcc-C-----CC-HHHHHHHHHHHHHHc---C--CCCeEEecCCCC
Q 016596 303 VVS-LDW---TVDMAEGRRRLGPDVAVQGNV-DPGAL-F-----GS-KDFITNRINDTVRKA---G--RWKHILNLGHGI 365 (386)
Q Consensus 303 ~l~-~d~---~~dl~e~~~~~g~~~~l~G~v-d~~~l-~-----gt-~eev~~~v~~~i~~~---~--~~g~Ils~gc~i 365 (386)
+++ +.. ...+.++.+++|-.+++|-.- .|..+ . .+ .++|.++.++.++.+ | ....||-||-+.
T Consensus 103 iINdvsg~~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~~v~~~l~~~i~~a~~~Gi~~~~IilDPg~Gf 182 (280)
T 1eye_A 103 MVNDVSGGRADPAMGPLLAEADVPWVLMHWRAVSADTPHVPVRYGNVVAEVRADLLASVADAVAAGVDPARLVLDPGLGF 182 (280)
T ss_dssp EEEETTTTSSCTTHHHHHHHHTCCEEEECCCCSCTTCTTSCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTS
T ss_pred EEEECCCCCCCHHHHHHHHHhCCeEEEEcCCCCCcchhhcCcchhHHHHHHHHHHHHHHHHHHHcCCChhhEEEECCCCc
Confidence 995 321 245778888888878886531 13222 1 11 345555555555544 3 347999999886
Q ss_pred CCCCcHHHHHHH
Q 016596 366 KVGTPEENVAHF 377 (386)
Q Consensus 366 ~~~tp~Eni~a~ 377 (386)
.. +...|+..+
T Consensus 183 ~k-~~~~n~~ll 193 (280)
T 1eye_A 183 AK-TAQHNWAIL 193 (280)
T ss_dssp SC-CHHHHHHHH
T ss_pred cc-CHHHHHHHH
Confidence 54 666666443
No 24
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=93.55 E-value=4.2 Score=36.90 Aligned_cols=142 Identities=16% Similarity=0.127 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEec----CCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFD----SWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTG 300 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d----~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g 300 (386)
+..++.++.+++.|||.|-++. |.+..+|++.=.+-+.|..+.+. +. ++++.+ +-... ....-.+.|
T Consensus 30 ~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~----~~--~v~iSI--DT~~~~Va~~al~aG 101 (270)
T 4hb7_A 30 ETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIV----GF--DVKISV--DTFRSEVAEACLKLG 101 (270)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHT----TS--SSEEEE--ECSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhh----cC--CCeEEE--ECCCHHHHHHHHHhc
Confidence 3455667778999999999874 23458998876666778776663 32 455433 32232 357777899
Q ss_pred CCEEE-cC-C--CCCHHHHHHHhCCCeeEEecCC-cCccCCCHHHHHHHHHHHHHHc---C--CCCeEEecCCCCCCCCc
Q 016596 301 VDVVS-LD-W--TVDMAEGRRRLGPDVAVQGNVD-PGALFGSKDFITNRINDTVRKA---G--RWKHILNLGHGIKVGTP 370 (386)
Q Consensus 301 ~d~l~-~d-~--~~dl~e~~~~~g~~~~l~G~vd-~~~l~gt~eev~~~v~~~i~~~---~--~~g~Ils~gc~i~~~tp 370 (386)
++++| +. . ...+.++...++-.+++|=.-. |.. ..-.+||.++..+.++.+ | ....||-||-|.. -+.
T Consensus 102 a~iINDVs~g~~d~~m~~~va~~~~~~vlMH~~~~p~~-~~vv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGFg-Kt~ 179 (270)
T 4hb7_A 102 VDMINDQWAGLYDHRMFQIVAKYDAEIILMHNGNGNRD-EPVVEEMLTSLLAQAHQAKIAGIPSNKIWLDPGIGFA-KTR 179 (270)
T ss_dssp CCEEEETTTTSSCTHHHHHHHHTTCEEEEECCCSSCCS-SCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS-CCH
T ss_pred cceeccccccccchhHHHHHHHcCCCeEEeccccCCcc-ccchhHHHHHHHHHHHHHHHcCCCCceEEEeCCCCcc-ccc
Confidence 99996 32 2 2457777888887788873211 111 223466766666555443 3 3579999999985 567
Q ss_pred HHHHHHH
Q 016596 371 EENVAHF 377 (386)
Q Consensus 371 ~Eni~a~ 377 (386)
..|+.-+
T Consensus 180 ~~N~~ll 186 (270)
T 4hb7_A 180 NEEAEVM 186 (270)
T ss_dssp HHHHHHH
T ss_pred ccHHHHH
Confidence 8888654
No 25
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=93.43 E-value=0.43 Score=45.73 Aligned_cols=144 Identities=13% Similarity=0.072 Sum_probs=84.7
Q ss_pred HHHHHHHHHhCCCEEEEecC-CcCCCCH----------------HHHH--HhhHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 016596 229 AKYVQYQADNGAQAVQIFDS-WATELSP----------------VDFE--EFSLPYLKQIVDTVKQTHPDLSLILYASGS 289 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~-~~~~iSp----------------~~f~--ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~ 289 (386)
++.+++..++|||.+-+--- -.+++|| ++|+ ++-+..++.|.+..++. |.+ +.+.--
T Consensus 47 ~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~--Gi~--~~stpf 122 (385)
T 1vli_A 47 FALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREK--QVI--FLSTVC 122 (385)
T ss_dssp HHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHT--TCE--EECBCC
T ss_pred HHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHc--CCc--EEEccC
Confidence 34445567799998865310 0122233 3344 46778899999999997 443 233222
Q ss_pred -cchHHHHHhcCCCEEEcCC--CCCHHHHHHH--hCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCC
Q 016596 290 -GGLLERLALTGVDVVSLDW--TVDMAEGRRR--LGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHG 364 (386)
Q Consensus 290 -~~~l~~l~e~g~d~l~~d~--~~dl~e~~~~--~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~ 364 (386)
..-++.+.+++++++-+.. ..|+.-+++. .|+-+.|.-| ..|.+|+...+.-+.+. |...+||-= |.
T Consensus 123 D~~svd~l~~~~vd~~KIgS~~~~N~pLL~~va~~gKPViLStG------maTl~Ei~~Ave~i~~~-Gn~~iiLlh-c~ 194 (385)
T 1vli_A 123 DEGSADLLQSTSPSAFKIASYEINHLPLLKYVARLNRPMIFSTA------GAEISDVHEAWRTIRAE-GNNQIAIMH-CV 194 (385)
T ss_dssp SHHHHHHHHTTCCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT------TCCHHHHHHHHHHHHTT-TCCCEEEEE-EC
T ss_pred CHHHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECC------CCCHHHHHHHHHHHHHC-CCCcEEEEe-cc
Confidence 2358999999999997753 3576666554 3443333322 35899998887766544 434677754 44
Q ss_pred CCCCCcHH--HHHHHHHHHHhh
Q 016596 365 IKVGTPEE--NVAHFFEVAKAI 384 (386)
Q Consensus 365 i~~~tp~E--ni~a~~~a~~~y 384 (386)
-...+|++ ||.+|-...+.|
T Consensus 195 s~YPtp~~~~nL~aI~~Lk~~f 216 (385)
T 1vli_A 195 AKYPAPPEYSNLSVIPMLAAAF 216 (385)
T ss_dssp SSSSCCGGGCCTTHHHHHHHHS
T ss_pred CCCCCChhhcCHHHHHHHHHHc
Confidence 33334444 555554444444
No 26
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=93.33 E-value=4.4 Score=37.18 Aligned_cols=126 Identities=18% Similarity=0.148 Sum_probs=71.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHh-cC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLAL-TG 300 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e-~g 300 (386)
++.++...++|+|++.+.-|...-.|++ =+.-|++++.++. +.|++++.. |.. . .+..+.+ .+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~~----~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p 155 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVSPYYNKPTQE----GIYQHFKAIDAAS-----TIPIIVYNIPGRSAIEIHVETLARIFEDCP 155 (292)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHH----HHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCT
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHH----HHHHHHHHHHHhC-----CCCEEEEeCccccCcCCCHHHHHHHHhhCC
Confidence 5566677789999999877765444543 3445667777765 468888763 432 2 2445555 54
Q ss_pred CCEEEc-CCCCC---HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHH
Q 016596 301 VDVVSL-DWTVD---MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAH 376 (386)
Q Consensus 301 ~d~l~~-d~~~d---l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a 376 (386)
+++.+ +...| +.++++..+++..++.|-|... ...+. .|+.|+|-+.++- -|+-+.+
T Consensus 156 -nIvgiK~s~gd~~~~~~~~~~~~~~f~v~~G~d~~~------------~~~l~-~G~~G~is~~~n~-----~P~~~~~ 216 (292)
T 2vc6_A 156 -NVKGVXDATGNLLRPSLERMACGEDFNLLTGEDGTA------------LGYMA-HGGHGCISVTANV-----APALCAD 216 (292)
T ss_dssp -TEEEEEECSCCTHHHHHHHHHSCTTSEEEESCGGGH------------HHHHH-TTCCEEEESGGGT-----CHHHHHH
T ss_pred -CEEEEecCCCCHHHHHHHHHHcCCCEEEEECchHHH------------HHHHH-cCCCEEEecHHHh-----CHHHHHH
Confidence 56665 33345 4455555665665555544322 11122 2344666655533 3455556
Q ss_pred HHHHHH
Q 016596 377 FFEVAK 382 (386)
Q Consensus 377 ~~~a~~ 382 (386)
|+++++
T Consensus 217 l~~a~~ 222 (292)
T 2vc6_A 217 FQQACL 222 (292)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 27
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=93.16 E-value=0.8 Score=42.45 Aligned_cols=146 Identities=12% Similarity=0.070 Sum_probs=82.2
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCE
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDV 303 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~ 303 (386)
-++..+++++++.++|++.|-+.- +.||+....+. -..+++..+.+. ++.++..|.. +...++...+.|++.
T Consensus 28 ~~e~k~~i~~~L~~~Gv~~IE~g~----~~~~~~~~~~~--d~~~~~~~~~~~-~~~~~~~l~~-~~~~i~~a~~aG~~~ 99 (302)
T 2ftp_A 28 EVADKIRLVDDLSAAGLDYIEVGS----FVSPKWVPQMA--GSAEVFAGIRQR-PGVTYAALAP-NLKGFEAALESGVKE 99 (302)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEE----CSCTTTCGGGT--THHHHHHHSCCC-TTSEEEEECC-SHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHcCcCEEEECC----CcCcccccccc--CHHHHHHHhhhc-CCCEEEEEeC-CHHHHHHHHhCCcCE
Confidence 355666778888899999887542 23332111111 011234444433 3677888873 433578888999998
Q ss_pred EEc-CCCCCH--------------------HHHHHHhCCCeeEEecCCcC----cc-CCCHHHHHHHHHHHHHHcCCCCe
Q 016596 304 VSL-DWTVDM--------------------AEGRRRLGPDVAVQGNVDPG----AL-FGSKDFITNRINDTVRKAGRWKH 357 (386)
Q Consensus 304 l~~-d~~~dl--------------------~e~~~~~g~~~~l~G~vd~~----~l-~gt~eev~~~v~~~i~~~~~~g~ 357 (386)
+.+ +...|. -+..+..|. .+.|++-.. .- .-++|++.+.++++.+.+.+ .+
T Consensus 100 v~i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~--~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d-~i 176 (302)
T 2ftp_A 100 VAVFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQV--RVRGYISCVLGCPYDGDVDPRQVAWVARELQQMGCY-EV 176 (302)
T ss_dssp EEEEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTC--EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTTCS-EE
T ss_pred EEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC--eEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCC-EE
Confidence 876 332221 122233443 444443322 11 46788888888887766423 55
Q ss_pred EEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 358 ILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 358 Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
.|+...++ ..|+.+..+++++++
T Consensus 177 ~l~DT~G~---~~P~~~~~lv~~l~~ 199 (302)
T 2ftp_A 177 SLGDTIGV---GTAGATRRLIEAVAS 199 (302)
T ss_dssp EEEESSSC---CCHHHHHHHHHHHTT
T ss_pred EEeCCCCC---cCHHHHHHHHHHHHH
Confidence 55544554 346666677777654
No 28
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=93.11 E-value=0.91 Score=42.94 Aligned_cols=144 Identities=13% Similarity=0.064 Sum_probs=84.5
Q ss_pred HHHHHHHHHhCCCEEEEecC-CcCCCCH---------------HHHH--HhhHHHHHHHHHHHHhhCCCCcEEEEecCCc
Q 016596 229 AKYVQYQADNGAQAVQIFDS-WATELSP---------------VDFE--EFSLPYLKQIVDTVKQTHPDLSLILYASGSG 290 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~-~~~~iSp---------------~~f~--ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~ 290 (386)
.+.+++..++|||++-+--= -.+++|| ++|+ ++-+..++.|.+..++. |.+ ++=..=+.
T Consensus 38 ~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~--Gi~-~~st~~d~ 114 (349)
T 2wqp_A 38 FEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESK--GMI-FISTLFSR 114 (349)
T ss_dssp HHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHT--TCE-EEEEECSH
T ss_pred HHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHh--CCe-EEEeeCCH
Confidence 34445567799998765310 0012222 4444 34677889999999997 444 22222233
Q ss_pred chHHHHHhcCCCEEEcCC--CCCHHHHHHH--hCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCC
Q 016596 291 GLLERLALTGVDVVSLDW--TVDMAEGRRR--LGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIK 366 (386)
Q Consensus 291 ~~l~~l~e~g~d~l~~d~--~~dl~e~~~~--~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~ 366 (386)
.-++.+.+++++++-+.. ..|+.-+++. .|+-+.|.-| ..|.+|+...+.-+.+.+ . .+||-= |.-.
T Consensus 115 ~svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstG------mat~~Ei~~Ave~i~~~G-~-~iiLlh-c~s~ 185 (349)
T 2wqp_A 115 AAALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTG------MNSIESIKKSVEIIREAG-V-PYALLH-CTNI 185 (349)
T ss_dssp HHHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECT------TCCHHHHHHHHHHHHHHT-C-CEEEEE-CCCC
T ss_pred HHHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECC------CCCHHHHHHHHHHHHHcC-C-CEEEEe-ccCC
Confidence 357889999999997754 3576666554 3443333222 359999998888776653 3 777764 4333
Q ss_pred CCCcHH--HHHHHHHHHHhh
Q 016596 367 VGTPEE--NVAHFFEVAKAI 384 (386)
Q Consensus 367 ~~tp~E--ni~a~~~a~~~y 384 (386)
..+|++ |+.++-..-+.|
T Consensus 186 Yp~~~~~~nL~ai~~lk~~f 205 (349)
T 2wqp_A 186 YPTPYEDVRLGGMNDLSEAF 205 (349)
T ss_dssp SSCCGGGCCTHHHHHHHHHC
T ss_pred CCCChhhcCHHHHHHHHHHC
Confidence 334444 555555444444
No 29
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=93.00 E-value=5.7 Score=36.86 Aligned_cols=94 Identities=19% Similarity=0.286 Sum_probs=58.8
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g 300 (386)
.++.++...++|+|++.+.-|...-.|++ =+.-|++++.++. +.|++++.. |.. . .+..+.+.+
T Consensus 107 ai~la~~A~~~Gadavlv~~P~y~~~s~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p 177 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVTPYYNKPTQE----GMYQHFRHIAEAV-----AIPQILYNVPGRTSCDMLPETVERLSKVP 177 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHH----HHHHHHHHHHHHS-----CSCEEEEECHHHHSCCCCHHHHHHHHTST
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHhcCC
Confidence 34666677789999999877765444543 3455788888876 468888865 332 2 245556654
Q ss_pred CCEEEc-CCCCCHHHH---HHHhCCCeeEEecCCc
Q 016596 301 VDVVSL-DWTVDMAEG---RRRLGPDVAVQGNVDP 331 (386)
Q Consensus 301 ~d~l~~-d~~~dl~e~---~~~~g~~~~l~G~vd~ 331 (386)
+++.+ +...|+... .+..+++..+..|-|.
T Consensus 178 -nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~d~ 211 (314)
T 3qze_A 178 -NIIGIKEATGDLQRAKEVIERVGKDFLVYSGDDA 211 (314)
T ss_dssp -TEEEEEECSCCHHHHHHHHHHSCTTSEEEESCGG
T ss_pred -CEEEEEcCCCCHHHHHHHHHHcCCCeEEEecChH
Confidence 66666 444566544 4445666666555543
No 30
>2qjg_A Putative aldolase MJ0400; beta-alpha barrel, lyase; HET: F2P; 2.60A {Methanocaldococcus jannaschii} PDB: 2qjh_A 2qji_A
Probab=92.81 E-value=3.8 Score=36.89 Aligned_cols=138 Identities=17% Similarity=0.121 Sum_probs=84.9
Q ss_pred HHHHHHHhCCCEE--EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe--------cCCc-chH----HH
Q 016596 231 YVQYQADNGAQAV--QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA--------SGSG-GLL----ER 295 (386)
Q Consensus 231 ~~~~~~e~G~d~i--~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~--------cG~~-~~l----~~ 295 (386)
.++..+++|++.| .+.+.. .+.+ + .....+++.+.+++. |.++++.+ +|.. ..+ ..
T Consensus 104 ~v~~a~~~Ga~~v~~~l~~~~---~~~~---~-~~~~~~~v~~~~~~~--g~~viv~~~~~G~~l~~~~~~~~~~~~a~~ 174 (273)
T 2qjg_A 104 TVEEAIRMGADAVSIHVNVGS---DEDW---E-AYRDLGMIAETCEYW--GMPLIAMMYPRGKHIQNERDPELVAHAARL 174 (273)
T ss_dssp CHHHHHHTTCSEEEEEEEETS---TTHH---H-HHHHHHHHHHHHHHH--TCCEEEEEEECSTTCSCTTCHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEEEecCC---CCHH---H-HHHHHHHHHHHHHHc--CCCEEEEeCCCCcccCCCCCHhHHHHHHHH
Confidence 3445678999998 443332 2322 2 234677888888876 57777654 1111 112 44
Q ss_pred HHhcCCCEEEcCCCCCHHHH---HHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHH
Q 016596 296 LALTGVDVVSLDWTVDMAEG---RRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEE 372 (386)
Q Consensus 296 l~e~g~d~l~~d~~~dl~e~---~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~E 372 (386)
..+.|+|.+.+.+..++..+ ++..+-.+...||+.+ .++|++.+.++++++.+.. |+.++.+- +...-|.+
T Consensus 175 a~~~Gad~i~~~~~~~~~~l~~i~~~~~ipvva~GGi~~----~~~~~~~~~~~~~~~~Ga~-gv~vg~~i-~~~~~~~~ 248 (273)
T 2qjg_A 175 GAELGADIVKTSYTGDIDSFRDVVKGCPAPVVVAGGPKT----NTDEEFLQMIKDAMEAGAA-GVAVGRNI-FQHDDVVG 248 (273)
T ss_dssp HHHTTCSEEEECCCSSHHHHHHHHHHCSSCEEEECCSCC----SSHHHHHHHHHHHHHHTCS-EEECCHHH-HTSSSHHH
T ss_pred HHHcCCCEEEECCCCCHHHHHHHHHhCCCCEEEEeCCCC----CCHHHHHHHHHHHHHcCCc-EEEeeHHh-hCCCCHHH
Confidence 56789998877765676544 4445555777888864 3588998889988876533 44443321 12234677
Q ss_pred HHHHHHHHHHh
Q 016596 373 NVAHFFEVAKA 383 (386)
Q Consensus 373 ni~a~~~a~~~ 383 (386)
.++++.+.+++
T Consensus 249 ~~~~l~~~~~~ 259 (273)
T 2qjg_A 249 ITRAVCKIVHE 259 (273)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHhc
Confidence 78888777665
No 31
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=92.59 E-value=3 Score=39.09 Aligned_cols=155 Identities=16% Similarity=0.105 Sum_probs=90.2
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||++.+++.- ++-.++.++...++|+|++
T Consensus 90 ~~vi~~~ve~~~grvpViaGvg~~s------------------------------------t~eai~la~~A~~~Gadav 133 (332)
T 2r8w_A 90 RRAIEAAATILRGRRTLMAGIGALR------------------------------------TDEAVALAKDAEAAGADAL 133 (332)
T ss_dssp HHHHHHHHHHHTTSSEEEEEECCSS------------------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCCC------------------------------------HHHHHHHHHHHHhcCCCEE
Confidence 3445555666677899988776531 1223355666778999999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCC----
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVD---- 311 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~d---- 311 (386)
.+.-|...-.|++ =+.-|++++.++. +.|++++.. |.. . .+..|.+.+ +++.+ +...|
T Consensus 134 lv~~P~Y~~~s~~----~l~~~f~~VA~a~-----~lPiilYn~P~~tg~~l~~e~~~~La~~p-nIvgiKdssgd~~~~ 203 (332)
T 2r8w_A 134 LLAPVSYTPLTQE----EAYHHFAAVAGAT-----ALPLAIYNNPTTTRFTFSDELLVRLAYIP-NIRAIKMPLPADADY 203 (332)
T ss_dssp EECCCCSSCCCHH----HHHHHHHHHHHHC-----SSCEEEECCHHHHCCCCCHHHHHHHHTST-TEEEEEECCCTTCCH
T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEeCccccCcCCCHHHHHHHHcCC-CEEEEEeCCCCchhH
Confidence 9877765445543 3555777887765 468888763 432 2 245555553 56666 44457
Q ss_pred HHHHHHHh---CCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 312 MAEGRRRL---GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 312 l~e~~~~~---g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
+..+.+.. +++..+. .|..+. ....+. .|+.|+|-+.+|- -|+-+.+|+++++
T Consensus 204 ~~~~~~l~~~~~~~f~v~--------~G~D~~----~l~~l~-~G~~G~is~~anv-----~P~~~~~l~~a~~ 259 (332)
T 2r8w_A 204 AGELARLRPKLSDDFAIG--------YSGDWG----CTDATL-AGGDTWYSVVAGL-----LPVPALQLMRAAQ 259 (332)
T ss_dssp HHHHHHHTTTSCTTCEEE--------ECCHHH----HHHHHH-TTCSEEEESGGGT-----CHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEE--------eCchHH----HHHHHH-CCCCEEEeCHHHh-----CHHHHHHHHHHHH
Confidence 77766654 2222222 344322 222333 3456777776653 4566667776654
No 32
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=92.50 E-value=6.7 Score=36.41 Aligned_cols=144 Identities=15% Similarity=0.143 Sum_probs=88.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecC----CcC----CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHH
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDS----WAT----ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERL 296 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~----~~~----~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l 296 (386)
+..++.++.+++.|||.|-++-. .+. .+|++.=.+-+.|..+.+.+.. ++|+.+=+ ... .++.-
T Consensus 49 ~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~-----~vpISIDT--~~~~Va~aA 121 (314)
T 3tr9_A 49 NSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF-----PQLISVDT--SRPRVMREA 121 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC-----CSEEEEEC--SCHHHHHHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC-----CCeEEEeC--CCHHHHHHH
Confidence 44556677899999999998742 223 5777665566777666555432 45654433 222 46666
Q ss_pred HhcCCCEEE-cCC--CCCHHHHHHHhCCCeeEEecC-CcCcc-CC----CHHHHHHHHHHHHHHc---C--CCCeEEecC
Q 016596 297 ALTGVDVVS-LDW--TVDMAEGRRRLGPDVAVQGNV-DPGAL-FG----SKDFITNRINDTVRKA---G--RWKHILNLG 362 (386)
Q Consensus 297 ~e~g~d~l~-~d~--~~dl~e~~~~~g~~~~l~G~v-d~~~l-~g----t~eev~~~v~~~i~~~---~--~~g~Ils~g 362 (386)
.+.|+++++ +.. ...+.++..++|-.+++|=.- .|..+ .. -.+|+.+..++.++.+ | ....||-||
T Consensus 122 l~aGa~iINDVsg~~~~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~~~~IilDPG 201 (314)
T 3tr9_A 122 VNTGADMINDQRALQLDDALTTVSALKTPVCLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGISEDRIIIDPG 201 (314)
T ss_dssp HHHTCCEEEETTTTCSTTHHHHHHHHTCCEEEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHcCCCEEEECCCCCchHHHHHHHHhCCeEEEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCCHhHEEEeCC
Confidence 778999985 422 236777778888777776421 23332 11 1356677666666654 3 247999999
Q ss_pred CC---CCCCCcHHHHHHH
Q 016596 363 HG---IKVGTPEENVAHF 377 (386)
Q Consensus 363 c~---i~~~tp~Eni~a~ 377 (386)
-+ +. .+...|+..+
T Consensus 202 ~G~~~F~-Kt~~~n~~lL 218 (314)
T 3tr9_A 202 FGQGNYG-KNVSENFYLL 218 (314)
T ss_dssp CCSGGGC-CCHHHHHHHH
T ss_pred CCchhhc-CCHHHHHHHH
Confidence 87 53 4556676443
No 33
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=92.47 E-value=6.3 Score=36.08 Aligned_cols=154 Identities=16% Similarity=0.161 Sum_probs=89.7
Q ss_pred HHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 016596 165 KALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQ 244 (386)
Q Consensus 165 ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~ 244 (386)
+.++...+..++.+||++.+++.- ++-.++.++...++|+|++.
T Consensus 59 ~v~~~~~~~~~grvpviaGvg~~~------------------------------------t~~ai~la~~a~~~Gadavl 102 (292)
T 3daq_A 59 LILKTVIDLVDKRVPVIAGTGTND------------------------------------TEKSIQASIQAKALGADAIM 102 (292)
T ss_dssp HHHHHHHHHHTTSSCEEEECCCSC------------------------------------HHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhCCCCcEEEeCCccc------------------------------------HHHHHHHHHHHHHcCCCEEE
Confidence 445555666677889888766441 22233455567788999999
Q ss_pred EecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHHHH
Q 016596 245 IFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAEGR 316 (386)
Q Consensus 245 i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e~~ 316 (386)
+.-|.-.-.|++ =+.-|++++.++. +.|++++.. |.. . .+..+.+.+ +++.+ +...|+....
T Consensus 103 v~~P~y~~~~~~----~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiK~ssgd~~~~~ 172 (292)
T 3daq_A 103 LITPYYNKTNQR----GLVKHFEAIADAV-----KLPVVLYNVPSRTNMTIEPETVEILSQHP-YIVALKDATNDFEYLE 172 (292)
T ss_dssp EECCCSSCCCHH----HHHHHHHHHHHHH-----CSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEEECCCCHHHHH
T ss_pred ECCCCCCCCCHH----HHHHHHHHHHHhC-----CCCEEEEecccccCCCCCHHHHHHHhcCC-CEEEEEeCCCCHHHHH
Confidence 877765444543 3555888998887 368888764 332 2 245666654 67666 4445776665
Q ss_pred HHh---CC-CeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 317 RRL---GP-DVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 317 ~~~---g~-~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
+.. ++ +..+..|-|... ...+. .|+.|+|-+.++ .-|+-+.+|+++.+
T Consensus 173 ~~~~~~~~~~f~v~~G~d~~~------------~~~l~-~G~~G~is~~~n-----~~P~~~~~l~~a~~ 224 (292)
T 3daq_A 173 EVKKRIDTNSFALYSGNDDNV------------VEYYQ-RGGQGVISVIAN-----VIPKEFQALYDAQQ 224 (292)
T ss_dssp HHHTTSCTTTSEEEESCGGGH------------HHHHH-TTCCEEEESGGG-----TCHHHHHHHHHHHH
T ss_pred HHHHHCCCCCEEEEECCHHHH------------HHHHh-cCCCEEEeCHHH-----hhHHHHHHHHHHHH
Confidence 543 44 444444444321 11222 234566655543 34566667776654
No 34
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=92.46 E-value=6.4 Score=36.14 Aligned_cols=122 Identities=16% Similarity=0.156 Sum_probs=74.2
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||+..+++.- ++-.++.++...++|+|++
T Consensus 63 ~~v~~~~~~~~~grvpviaGvg~~~------------------------------------t~~ai~la~~a~~~Gadav 106 (297)
T 3flu_A 63 TAVIEAVVKHVAKRVPVIAGTGANN------------------------------------TVEAIALSQAAEKAGADYT 106 (297)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCSS------------------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEeCCCcC------------------------------------HHHHHHHHHHHHHcCCCEE
Confidence 3445556666677889888766541 2223456666778999999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHHH
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAEG 315 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e~ 315 (386)
.+.-|.-.-.|.+ =+.-|++++.++. +.|++++.. |.. . .+..+.+.+ +++.+ +...|+...
T Consensus 107 lv~~P~y~~~~~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiKdssgd~~~~ 176 (297)
T 3flu_A 107 LSVVPYYNKPSQE----GIYQHFKTIAEAT-----SIPMIIYNVPGRTVVSMTNDTILRLAEIP-NIVGVKEASGNIGSN 176 (297)
T ss_dssp EEECCCSSCCCHH----HHHHHHHHHHHHC-----CSCEEEEECHHHHSSCCCHHHHHHHTTST-TEEEEEECSCCHHHH
T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHhC-----CCCEEEEECCchhccCCCHHHHHHHHcCC-CEEEEEeCCCCHHHH
Confidence 9877765444543 3455788888876 468888764 332 2 244555554 56665 344566544
Q ss_pred ---HHHhCCCeeEEecCCc
Q 016596 316 ---RRRLGPDVAVQGNVDP 331 (386)
Q Consensus 316 ---~~~~g~~~~l~G~vd~ 331 (386)
.+..+++..+..|-|.
T Consensus 177 ~~~~~~~~~~f~v~~G~d~ 195 (297)
T 3flu_A 177 IELINRAPEGFVVLSGDDH 195 (297)
T ss_dssp HHHHHHSCTTCEEEECCGG
T ss_pred HHHHHhcCCCeEEEECcHH
Confidence 4555666666555543
No 35
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=92.40 E-value=1.1 Score=41.34 Aligned_cols=137 Identities=9% Similarity=0.017 Sum_probs=88.0
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC------CcchH----HHHHhcCC
Q 016596 232 VQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG------SGGLL----ERLALTGV 301 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG------~~~~l----~~l~e~g~ 301 (386)
++..++.|||.|.+.-.+++ + . +.....-..++++.++++ |.|+++-.+- +...+ ..-.++|+
T Consensus 131 ve~Av~~GAdaV~~~i~~Gs---~-~-~~~~l~~i~~v~~~a~~~--GlpvIie~~~G~~~~~d~e~i~~aariA~elGA 203 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIGS---E-Y-EHQSIKNIIQLVDAGMKV--GMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGA 203 (295)
T ss_dssp HHHHHHTTCSEEEEEECTTS---T-T-HHHHHHHHHHHHHHHHTT--TCCEEEEECC----CCSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHCCCCEEEEEEECCC---C-c-HHHHHHHHHHHHHHHHHc--CCEEEEECCCCCccCCCHHHHHHHHHHHHHhCC
Confidence 34456899999887544442 1 1 223444578889999887 5788875432 11112 22347899
Q ss_pred CEEEcCCC-CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCC-CCCCcHHHHHHHHH
Q 016596 302 DVVSLDWT-VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGI-KVGTPEENVAHFFE 379 (386)
Q Consensus 302 d~l~~d~~-~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i-~~~tp~Eni~a~~~ 379 (386)
|.+-.... .+++++.+..+-.+.+.||+. .+.++..+.+++.++.+ ..|.+++. .+ ..+-|.+-++++.+
T Consensus 204 D~VKt~~t~e~~~~vv~~~~vPVv~~GG~~-----~~~~~~l~~v~~ai~aG-A~Gv~vGR--nI~q~~dp~~~~~al~~ 275 (295)
T 3glc_A 204 QIIKTYYVEKGFERIVAGCPVPIVIAGGKK-----LPEREALEMCWQAIDQG-ASGVDMGR--NIFQSDHPVAMMKAVQA 275 (295)
T ss_dssp SEEEEECCTTTHHHHHHTCSSCEEEECCSC-----CCHHHHHHHHHHHHHTT-CSEEEESH--HHHTSSSHHHHHHHHHH
T ss_pred CEEEeCCCHHHHHHHHHhCCCcEEEEECCC-----CCHHHHHHHHHHHHHhC-CeEEEeHH--HHhcCcCHHHHHHHHHH
Confidence 99866543 467888776655577788874 36789999999999864 33555543 33 23456777777777
Q ss_pred HHHh
Q 016596 380 VAKA 383 (386)
Q Consensus 380 a~~~ 383 (386)
.+++
T Consensus 276 ivh~ 279 (295)
T 3glc_A 276 VVHH 279 (295)
T ss_dssp HHHH
T ss_pred HHhC
Confidence 7665
No 36
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=92.20 E-value=6 Score=36.72 Aligned_cols=155 Identities=15% Similarity=0.168 Sum_probs=91.2
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||+..+++.- ++-.++.++...++|+|++
T Consensus 78 ~~v~~~~v~~~~grvpViaGvg~~s------------------------------------t~~ai~la~~A~~~Gadav 121 (315)
T 3si9_A 78 KRIIELCVEQVAKRVPVVAGAGSNS------------------------------------TSEAVELAKHAEKAGADAV 121 (315)
T ss_dssp HHHHHHHHHHHTTSSCBEEECCCSS------------------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEeCCCCC------------------------------------HHHHHHHHHHHHhcCCCEE
Confidence 4455556666667788877765431 2223456667778999999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHh-cCCCEEEc-CCCCCH--
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLAL-TGVDVVSL-DWTVDM-- 312 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e-~g~d~l~~-d~~~dl-- 312 (386)
.+.-|.-.-.|++ =+.-|++.+.++. +.|++++.. |.. . .+..+.+ .+ +++.+ +...|+
T Consensus 122 lv~~P~y~~~~~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p-nIvgiKdssgd~~~ 191 (315)
T 3si9_A 122 LVVTPYYNRPNQR----GLYTHFSSIAKAI-----SIPIIIYNIPSRSVIDMAVETMRDLCRDFK-NIIGVKDATGKIER 191 (315)
T ss_dssp EEECCCSSCCCHH----HHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCT-TEEEEEECSCCTHH
T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHcC-----CCCEEEEeCchhhCCCCCHHHHHHHHhhCC-CEEEEEeCCCCHHH
Confidence 9877765445543 3456788888876 468888864 332 2 2455666 65 66666 333454
Q ss_pred -HHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 313 -AEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 313 -~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
.++.+..+++..+..|-|... ...+. .|+.|+|-+.++- -|+-+.+|+++++
T Consensus 192 ~~~l~~~~~~~f~v~~G~d~~~------------l~~l~-~G~~G~is~~an~-----~P~~~~~l~~a~~ 244 (315)
T 3si9_A 192 ASEQREKCGKDFVQLSGDDCTA------------LGFNA-HGGVGCISVSSNV-----APKLCAQLHAACL 244 (315)
T ss_dssp HHHHHHHHCSSSEEEESCGGGH------------HHHHH-TTCCEEEESGGGT-----CHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCeEEEecCHHHH------------HHHHH-cCCCEEEecHHHh-----hHHHHHHHHHHHH
Confidence 455555666666655554321 12222 2445677555433 3566666666654
No 37
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=92.16 E-value=2 Score=41.44 Aligned_cols=165 Identities=13% Similarity=0.092 Sum_probs=92.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhCCCE--EEEe-cCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc----
Q 016596 219 ALLRKFTTSMAKYVQYQADNGAQA--VQIF-DSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---- 291 (386)
Q Consensus 219 ~ll~~~~~~~~~~~~~~~e~G~d~--i~i~-d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---- 291 (386)
++.+.+.++....++.+.+.|+.. +.+. +...++.+...++++ .-+++..++++|+..++.++++|.+....
T Consensus 134 ~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~~g~~~~~~~~~l-a~ll~ag~~aVR~v~p~~~V~ih~~~~~~~~~~ 212 (399)
T 1ur4_A 134 DKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETNGGLAGETDWAKM-SQLFNAGSQAVRETDSNILVALHFTNPETSGRY 212 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCSSCBTTBCCHHHH-HHHHHHHHHHHHHHCTTSEEEEEECCTTSTTHH
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccccccCCcccHHHH-HHHHHHHHHHHHHhCCCCeEEEEeCCCcchHHH
Confidence 455555666666677777777654 4443 333445444444433 35777888888888778889999985421
Q ss_pred --hHHHHHhcC--CCEEEcCCCC----C-------HHHHHHHhCCCeeEE--ecCCcC---------------cc--CCC
Q 016596 292 --LLERLALTG--VDVVSLDWTV----D-------MAEGRRRLGPDVAVQ--GNVDPG---------------AL--FGS 337 (386)
Q Consensus 292 --~l~~l~e~g--~d~l~~d~~~----d-------l~e~~~~~g~~~~l~--G~vd~~---------------~l--~gt 337 (386)
+++.+...| +|+|++.... . |.++.+++|+.+.|. |--... .. --|
T Consensus 213 ~~~~d~l~~~g~d~DvIG~syYp~W~~~l~~l~~~l~~l~~rygKpV~v~EtG~~~~~~~~d~~~n~~~~~~~~~~~~~s 292 (399)
T 1ur4_A 213 AWIAETLHRHHVDYDVFASSYYPFWHGTLKNLTSVLTSVADTYGKKVMVAETSYTYTAEDGDGHGNTAPKNGQTLNNPVT 292 (399)
T ss_dssp HHHHHHHHHTTCCCSEEEEEECTTTSCCHHHHHHHHHHHHHHHCCEEEEEEECCCSCSCCSSSSCCSSSCTTSCCCSCSS
T ss_pred HHHHHHHHHcCCCcCeEeEecCccchhhHHHHHHHHHHHHHHhCCcEEEEEecCCccCCCCCCcccccccccccCCCCCC
Confidence 247777665 6788664332 2 566777888776652 221110 01 136
Q ss_pred HHHHHHHHHHHHHHcC-----CCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 338 KDFITNRINDTVRKAG-----RWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 338 ~eev~~~v~~~i~~~~-----~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
++.=.+.++++++.+. +.|+..---+-+|.. +.+|...=-.+..++|
T Consensus 293 ~~gQa~~l~~l~~~v~~~~~~g~GvfyWep~w~~~~-~~~~~~~n~~~~~~~g 344 (399)
T 1ur4_A 293 VQGQANAVRDVIQAVSDVGEAGIGVFYWEPAWIPVG-PAHRLEKNKALWETYG 344 (399)
T ss_dssp HHHHHHHHHHHHHHHHTTCTTEEEEEEECTTCCCSS-CGGGHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhccCceEEEEEEccceeccc-ccccccccccccccCC
Confidence 6666777777766542 234444433344432 2355544444444443
No 38
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=91.60 E-value=8 Score=35.36 Aligned_cols=155 Identities=21% Similarity=0.216 Sum_probs=88.5
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++.+||++.+++.- ++-.++.++...++|+|++
T Consensus 57 ~~v~~~~~~~~~gr~pviaGvg~~~------------------------------------t~~ai~la~~a~~~Gadav 100 (291)
T 3tak_A 57 TQVIKEIIRVANKRIPIIAGTGANS------------------------------------TREAIELTKAAKDLGADAA 100 (291)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCSS------------------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCC------------------------------------HHHHHHHHHHHHhcCCCEE
Confidence 3445556666677889888766531 1222356666778999999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHHH
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAEG 315 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e~ 315 (386)
.+.-|.-.-.|++ =+.-|++++.++. +.|++++.. |.. . .+..+.+.+ +++.+ +...|+...
T Consensus 101 lv~~P~y~~~~~~----~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nivgiK~ssgd~~~~ 170 (291)
T 3tak_A 101 LLVTPYYNKPTQE----GLYQHYKAIAEAV-----ELPLILYNVPGRTGVDLSNDTAVRLAEIP-NIVGIKDATGDVPRG 170 (291)
T ss_dssp EEECCCSSCCCHH----HHHHHHHHHHHHC-----CSCEEEEECHHHHSCCCCHHHHHHHTTST-TEEEEEECSCCHHHH
T ss_pred EEcCCCCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEecccccCCCCCHHHHHHHHcCC-CEEEEEeCCCCHHHH
Confidence 9877764444543 3456788888876 468888865 332 2 244555554 56665 344566544
Q ss_pred ---HHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 316 ---RRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 316 ---~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
.+..+++..+..|-|. . ....+. .|+.|+|-+.++ .-|+-+.+|+++.+
T Consensus 171 ~~~~~~~~~~f~v~~G~d~--------~----~~~~l~-~G~~G~is~~~n-----~~P~~~~~l~~a~~ 222 (291)
T 3tak_A 171 KALIDALNGKMAVYSGDDE--------T----AWELML-LGADGNISVTAN-----IAPKAMSEVCAVAI 222 (291)
T ss_dssp HHHHHHHTTSSEEEECCHH--------H----HHHHHH-TTCCEEEESGGG-----TCHHHHHHHHHHHH
T ss_pred HHHHHHcCCCeEEEECcHH--------H----HHHHHH-CCCCEEEechhh-----hcHHHHHHHHHHHH
Confidence 4445555444443332 2 122222 234566665554 34566666666654
No 39
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=91.22 E-value=1 Score=41.88 Aligned_cols=146 Identities=8% Similarity=0.019 Sum_probs=79.7
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCE
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDV 303 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~ 303 (386)
-++..+++++.+.++|++.|=+.- +.||+....+.-+ .+++..+.+. ++..+..+. -+..-++...+.|++.
T Consensus 26 ~~e~k~~i~~~L~~~Gv~~IE~g~----~~~~~~~p~~~d~--~~~~~~~~~~-~~~~~~~l~-~~~~~i~~a~~~g~~~ 97 (307)
T 1ydo_A 26 ATEDKITWINQLSRTGLSYIEITS----FVHPKWIPALRDA--IDVAKGIDRE-KGVTYAALV-PNQRGLENALEGGINE 97 (307)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEEE----CSCTTTCGGGTTH--HHHHHHSCCC-TTCEEEEEC-CSHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEECC----CcCcccccccCCH--HHHHHHhhhc-CCCeEEEEe-CCHHhHHHHHhCCcCE
Confidence 355666778888899999886542 3333321111111 1234444433 245555554 2333478888899998
Q ss_pred EEcCCCC-----------CHH----------HHHHHhCCCeeEEecCCcC----cc-CCCHHHHHHHHHHHHHHcCCCCe
Q 016596 304 VSLDWTV-----------DMA----------EGRRRLGPDVAVQGNVDPG----AL-FGSKDFITNRINDTVRKAGRWKH 357 (386)
Q Consensus 304 l~~d~~~-----------dl~----------e~~~~~g~~~~l~G~vd~~----~l-~gt~eev~~~v~~~i~~~~~~g~ 357 (386)
+.+.... +.+ +..+..|. .+.|++-.. .- .-+++.+.+.++++.+.+.+ .+
T Consensus 98 v~i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~--~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~-~i 174 (307)
T 1ydo_A 98 ACVFMSASETHNRKNINKSTSESLHILKQVNNDAQKANL--TTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFGIS-EL 174 (307)
T ss_dssp EEEEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTC--EEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHTCS-CE
T ss_pred EEEEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC--EEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCC-EE
Confidence 8653211 111 22233443 344544322 11 46788888888888776433 44
Q ss_pred EEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 358 ILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 358 Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
.|.- .+ .-..|+.+..+++++++
T Consensus 175 ~l~D--T~-G~~~P~~v~~lv~~l~~ 197 (307)
T 1ydo_A 175 SLGD--TI-GAANPAQVETVLEALLA 197 (307)
T ss_dssp EEEC--SS-CCCCHHHHHHHHHHHHT
T ss_pred EEcC--CC-CCcCHHHHHHHHHHHHH
Confidence 4432 22 23457778888888775
No 40
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=91.20 E-value=8.8 Score=35.12 Aligned_cols=122 Identities=17% Similarity=0.217 Sum_probs=73.7
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||+..+++.- ++-.++.++...++|+|++
T Consensus 56 ~~v~~~~~~~~~grvpviaGvg~~~------------------------------------t~~ai~la~~A~~~Gadav 99 (294)
T 2ehh_A 56 EKVIEFAVKRAAGRIKVIAGTGGNA------------------------------------THEAVHLTAHAKEVGADGA 99 (294)
T ss_dssp HHHHHHHHHHHTTSSEEEEECCCSC------------------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCCC------------------------------------HHHHHHHHHHHHhcCCCEE
Confidence 3445555666677889988776531 1223456666778999999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHH-hcCCCEEEc-CCCCCHHH
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLA-LTGVDVVSL-DWTVDMAE 314 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~-e~g~d~l~~-d~~~dl~e 314 (386)
.+.-|...-.|+ +=+.-|++++.++. +.|++++.. |.. . .+..+. +.+ +++.+ +...|+..
T Consensus 100 lv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p-nivgiKds~gd~~~ 169 (294)
T 2ehh_A 100 LVVVPYYNKPTQ----RGLYEHFKTVAQEV-----DIPIIIYNIPSRTCVEISVDTMFKLASECE-NIVASKESTPNMDR 169 (294)
T ss_dssp EEECCCSSCCCH----HHHHHHHHHHHHHC-----CSCEEEEECHHHHSCCCCHHHHHHHHHHCT-TEEEEEECCSCHHH
T ss_pred EECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCCcccCcCCCHHHHHHHHhhCC-CEEEEEeCCCCHHH
Confidence 987776544454 33455777777765 468888764 432 2 245555 553 56665 44456654
Q ss_pred ---HHHHhCCCeeEEecCCc
Q 016596 315 ---GRRRLGPDVAVQGNVDP 331 (386)
Q Consensus 315 ---~~~~~g~~~~l~G~vd~ 331 (386)
+++..+++..++.|-|.
T Consensus 170 ~~~~~~~~~~~f~v~~G~d~ 189 (294)
T 2ehh_A 170 ISEIVKRLGESFSVLSGDDS 189 (294)
T ss_dssp HHHHHHHHCTTSEEEESSGG
T ss_pred HHHHHHhcCCCeEEEECcHH
Confidence 44455656666555554
No 41
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=91.15 E-value=8.3 Score=35.39 Aligned_cols=126 Identities=21% Similarity=0.199 Sum_probs=70.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~ 301 (386)
++.++...++|+|++.+.-|...-.|+ +=+.-|++++.++. +.|++++.. |.. . .+..+.+.+
T Consensus 85 i~la~~A~~~Gadavlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p- 154 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVAGYYNRPSQ----EGLYQHFKMVHDAI-----DIPIIVYNIPPRAVVDIKPETMARLAALP- 154 (297)
T ss_dssp HHHHHHHHHHTCSEEEECCCTTTCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHTST-
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHHcCC-
Confidence 456666778999999987766443454 34455777887765 468888764 432 2 244555553
Q ss_pred CEEEc-CCCCCHHH---HHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHH
Q 016596 302 DVVSL-DWTVDMAE---GRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHF 377 (386)
Q Consensus 302 d~l~~-d~~~dl~e---~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~ 377 (386)
+++.+ +...|+.. +++..+++..++.|-|...+ ..+. .|+.|+|-+.++- -|+-+.+|
T Consensus 155 nIvgiKds~gd~~~~~~~~~~~~~~f~v~~G~d~~~l------------~~l~-~G~~G~is~~an~-----~P~~~~~l 216 (297)
T 2rfg_A 155 RIVGVKDATTDLARISRERMLINKPFSFLSGDDMTAI------------AYNA-SGGQGCISVSANI-----APALYGQM 216 (297)
T ss_dssp TEEEEEECSCCTTHHHHHHTTCCSCCEEEESCGGGHH------------HHHH-TTCCEEEESGGGT-----CHHHHHHH
T ss_pred CEEEEEeCCCCHHHHHHHHHhcCCCEEEEeCcHHHHH------------HHHH-CCCCEEEecHHHh-----hHHHHHHH
Confidence 56655 33345444 44444555555555443221 1122 3445666665543 34556666
Q ss_pred HHHHH
Q 016596 378 FEVAK 382 (386)
Q Consensus 378 ~~a~~ 382 (386)
+++++
T Consensus 217 ~~a~~ 221 (297)
T 2rfg_A 217 QTATL 221 (297)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 42
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=91.00 E-value=1.6 Score=41.99 Aligned_cols=123 Identities=15% Similarity=0.144 Sum_probs=70.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
...++++++.++|++.+.+. .+-.--||..|+.+....++.+.+..++. |.+++-=.. +...++.+.++ ++++-+
T Consensus 157 ~a~~~a~~~k~aGa~~vk~q-~fkprts~~~f~gl~~egl~~L~~~~~~~--Gl~~~te~~-d~~~~~~l~~~-vd~lkI 231 (385)
T 3nvt_A 157 QVAAVAESIKAKGLKLIRGG-AFKPRTSPYDFQGLGLEGLKILKRVSDEY--GLGVISEIV-TPADIEVALDY-VDVIQI 231 (385)
T ss_dssp HHHHHHHHHHHTTCCEEECB-SSCCCSSTTSCCCCTHHHHHHHHHHHHHH--TCEEEEECC-SGGGHHHHTTT-CSEEEE
T ss_pred HHHHHHHHHHHcCCCeEEcc-cccCCCChHhhcCCCHHHHHHHHHHHHHc--CCEEEEecC-CHHHHHHHHhh-CCEEEE
Confidence 34556666777999987642 22111234445555556667777777776 566443222 22347888888 999877
Q ss_pred CCC--CCHHHHHH--HhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEe
Q 016596 307 DWT--VDMAEGRR--RLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILN 360 (386)
Q Consensus 307 d~~--~dl~e~~~--~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils 360 (386)
... .+..-+++ .+|.-+.+.-|. .+|++|+...+..+...+ ...++|.
T Consensus 232 gs~~~~n~~LL~~~a~~gkPVilk~G~-----~~t~~e~~~Ave~i~~~G-n~~i~L~ 283 (385)
T 3nvt_A 232 GARNMQNFELLKAAGRVDKPILLKRGL-----SATIEEFIGAAEYIMSQG-NGKIILC 283 (385)
T ss_dssp CGGGTTCHHHHHHHHTSSSCEEEECCT-----TCCHHHHHHHHHHHHTTT-CCCEEEE
T ss_pred CcccccCHHHHHHHHccCCcEEEecCC-----CCCHHHHHHHHHHHHHcC-CCeEEEE
Confidence 542 45433333 333322222222 589999999988776543 3355554
No 43
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=90.96 E-value=2.4 Score=38.42 Aligned_cols=138 Identities=12% Similarity=0.058 Sum_probs=87.3
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC---------CcchH----HHHHh
Q 016596 232 VQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG---------SGGLL----ERLAL 298 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG---------~~~~l----~~l~e 298 (386)
++..++.|++.|.+...+++ ..+ +......+++.+.++++ +.|+++.+-- +...+ ....+
T Consensus 98 ve~Ai~~Ga~~v~~~~nig~----~~~-~~~~~~~~~v~~~~~~~--~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~ 170 (263)
T 1w8s_A 98 VEEAVSLGASAVGYTIYPGS----GFE-WKMFEELARIKRDAVKF--DLPLVVESFPRGGKVVNETAPEIVAYAARIALE 170 (263)
T ss_dssp HHHHHHTTCSEEEEEECTTS----TTH-HHHHHHHHHHHHHHHHH--TCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEecCC----cCH-HHHHHHHHHHHHHHHHc--CCeEEEEeeCCCCccccCCCHHHHHHHHHHHHH
Confidence 44566889999988665542 222 34566778888888887 5787775322 11222 33457
Q ss_pred cCCCEEEcCCCC---CHHHHHHHhCC-CeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCC-CCCCcHHH
Q 016596 299 TGVDVVSLDWTV---DMAEGRRRLGP-DVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGI-KVGTPEEN 373 (386)
Q Consensus 299 ~g~d~l~~d~~~---dl~e~~~~~g~-~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i-~~~tp~En 373 (386)
.|+|.+-..... +++++++..+. .+...||+. .+|.++..+.++..++.+.. |...+. .+ ..+-|.+.
T Consensus 171 ~GAD~vkt~~~~~~e~~~~~~~~~~~~pV~asGGi~----~~~~~~~l~~i~~~~~aGA~-Gvsvgr--aI~~~~dp~~~ 243 (263)
T 1w8s_A 171 LGADAMKIKYTGDPKTFSWAVKVAGKVPVLMSGGPK----TKTEEDFLKQVEGVLEAGAL-GIAVGR--NVWQRRDALKF 243 (263)
T ss_dssp HTCSEEEEECCSSHHHHHHHHHHTTTSCEEEECCSC----CSSHHHHHHHHHHHHHTTCC-EEEESH--HHHTSTTHHHH
T ss_pred cCCCEEEEcCCCCHHHHHHHHHhCCCCeEEEEeCCC----CCCHHHHHHHHHHHHHcCCe-EEEEeh--hhcCCcCHHHH
Confidence 899988665433 45566666666 688899884 24789999999999986544 444432 22 22336666
Q ss_pred HHHHHHHHHh
Q 016596 374 VAHFFEVAKA 383 (386)
Q Consensus 374 i~a~~~a~~~ 383 (386)
++++.+.+++
T Consensus 244 ~~~l~~~v~~ 253 (263)
T 1w8s_A 244 ARALAELVYG 253 (263)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHHhc
Confidence 7777666554
No 44
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=90.80 E-value=10 Score=35.03 Aligned_cols=122 Identities=16% Similarity=0.165 Sum_probs=72.1
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++.+||++.+++.- ++-.++.++...++|+|++
T Consensus 70 ~~v~~~~~~~~~gr~pviaGvg~~~------------------------------------t~~ai~la~~A~~~Gadav 113 (307)
T 3s5o_A 70 LEVVSRVRQAMPKNRLLLAGSGCES------------------------------------TQATVEMTVSMAQVGADAA 113 (307)
T ss_dssp HHHHHHHHHTSCTTSEEEEECCCSS------------------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHcCCCCcEEEecCCCC------------------------------------HHHHHHHHHHHHHcCCCEE
Confidence 3445556666677788887765431 2223455566778999999
Q ss_pred EEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHH
Q 016596 244 QIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMA 313 (386)
Q Consensus 244 ~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~ 313 (386)
.+.-|... -.|+ +=+.-|++++.++. +.|++++.. |.. . .+..+.+.+ +++.+ +...|+.
T Consensus 114 lv~~P~y~~~~~s~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~~ 183 (307)
T 3s5o_A 114 MVVTPCYYRGRMSS----AALIHHYTKVADLS-----PIPVVLYSVPANTGLDLPVDAVVTLSQHP-NIVGMXDSGGDVT 183 (307)
T ss_dssp EEECCCTTGGGCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHTST-TEEEEEECSCCHH
T ss_pred EEcCCCcCCCCCCH----HHHHHHHHHHHhhc-----CCCEEEEeCCcccCCCCCHHHHHHHhcCC-CEEEEEcCCCCHH
Confidence 98666532 1343 34555778887765 468888775 322 2 245556654 66666 4445776
Q ss_pred HHHHH---h-CCCeeEEecCCc
Q 016596 314 EGRRR---L-GPDVAVQGNVDP 331 (386)
Q Consensus 314 e~~~~---~-g~~~~l~G~vd~ 331 (386)
.+.+. . +++..+..|-|.
T Consensus 184 ~~~~~~~~~~~~~f~v~~G~d~ 205 (307)
T 3s5o_A 184 RIGLIVHKTRKQDFQVLAGSAG 205 (307)
T ss_dssp HHHHHHHHTTTSSCEEEESSGG
T ss_pred HHHHHHHhccCCCeEEEeCcHH
Confidence 55443 3 345555555553
No 45
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=90.64 E-value=1.3 Score=40.01 Aligned_cols=107 Identities=16% Similarity=0.212 Sum_probs=57.4
Q ss_pred HHHHHHHHHhhCCCCcEEEE-ecCCcc------hHHHHHhcCCCEEEcCCCC-C--------------------------
Q 016596 266 LKQIVDTVKQTHPDLSLILY-ASGSGG------LLERLALTGVDVVSLDWTV-D-------------------------- 311 (386)
Q Consensus 266 ~k~l~~~i~~~~~~~~~~~H-~cG~~~------~l~~l~e~g~d~l~~d~~~-d-------------------------- 311 (386)
+++.++.+++.+ ....+-| ..|+.. .+..+.+.|+|++.++... |
T Consensus 4 ~~~~f~~~~~~~-~~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~ 82 (262)
T 2ekc_A 4 ISDKFTELKEKR-EKALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVL 82 (262)
T ss_dssp HHHHHHHHHHHT-BCEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHhcC-CceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHH
Confidence 455566665543 2233444 477643 2466678899998765321 1
Q ss_pred --HHHHHHHh-CCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 312 --MAEGRRRL-GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 --l~e~~~~~-g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
+.++++.+ .-.+.+||..+|..-+|. .+.++++.+. |-.|+|+ ++.|+|.+..+++.++++|
T Consensus 83 ~~v~~ir~~~~~~Pi~~m~y~n~v~~~g~----~~f~~~~~~a-G~dgvii-------~dl~~ee~~~~~~~~~~~g 147 (262)
T 2ekc_A 83 ELSETLRKEFPDIPFLLMTYYNPIFRIGL----EKFCRLSREK-GIDGFIV-------PDLPPEEAEELKAVMKKYV 147 (262)
T ss_dssp HHHHHHHHHCTTSCEEEECCHHHHHHHCH----HHHHHHHHHT-TCCEEEC-------TTCCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHhhcCCCCEEEEecCcHHHHhhH----HHHHHHHHHc-CCCEEEE-------CCCCHHHHHHHHHHHHHcC
Confidence 55666665 334555654444211233 2333344333 3235555 2555677777777777776
No 46
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=90.63 E-value=9.3 Score=34.42 Aligned_cols=144 Identities=11% Similarity=0.050 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhc--CCC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALT--GVD 302 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~--g~d 302 (386)
.+...+.++.+++.|||.|-+.-.. ..++++. -+++++..+++.. ++|+.+-+. +...++.-.+. |.+
T Consensus 24 ~~~a~~~a~~~v~~GAdiIDIg~g~-~~v~~~e-------e~~rvv~~i~~~~-~~pisIDT~-~~~v~~aAl~a~~Ga~ 93 (262)
T 1f6y_A 24 PAPVQEWARRQEEGGARALDLNVGP-AVQDKVS-------AMEWLVEVTQEVS-NLTLCLDST-NIKAIEAGLKKCKNRA 93 (262)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEBCC-----CHHH-------HHHHHHHHHHTTC-CSEEEEECS-CHHHHHHHHHHCSSCE
T ss_pred HHHHHHHHHHHHHCCCcEEEECCCC-CCCChHH-------HHHHHHHHHHHhC-CCeEEEeCC-CHHHHHHHHhhCCCCC
Confidence 4556677888999999999886522 2344433 2334445554432 566655443 22245666666 999
Q ss_pred EEE-cCCCC----CHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHH---cC--CCCeEEecCCC-CCCC--C
Q 016596 303 VVS-LDWTV----DMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRK---AG--RWKHILNLGHG-IKVG--T 369 (386)
Q Consensus 303 ~l~-~d~~~----dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~---~~--~~g~Ils~gc~-i~~~--t 369 (386)
+++ +.... .+.++.+++|-.+++|-. +....-.|.++..+..++.++. .| ....|+-||.+ +..+ .
T Consensus 94 iINdvs~~~d~~~~~~~~~a~~~~~vvlmh~-~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilDPg~g~~g~~~~~ 172 (262)
T 1f6y_A 94 MINSTNAEREKVEKLFPLAVEHGAALIGLTM-NKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYIDPLILPANVAQDH 172 (262)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCEEEEESC-CSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCCTTTCTTH
T ss_pred EEEECCCCcccHHHHHHHHHHhCCcEEEEcC-CCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEeCCCCcCCCChHH
Confidence 985 44221 355666778776666642 2222223445554555555443 34 35799999986 3222 2
Q ss_pred cHHHHHHHHH
Q 016596 370 PEENVAHFFE 379 (386)
Q Consensus 370 p~Eni~a~~~ 379 (386)
..+.++++-+
T Consensus 173 ~~~~l~~l~~ 182 (262)
T 1f6y_A 173 APEVLKTLQQ 182 (262)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 3455555443
No 47
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=90.38 E-value=8.4 Score=35.40 Aligned_cols=148 Identities=11% Similarity=0.113 Sum_probs=92.0
Q ss_pred HHHHHHHHHHHhCCCEEEEec-C---CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFD-S---WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVD 302 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d-~---~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d 302 (386)
..++.++.+++.|||.|-++- + .+..+|++.=-+-+.|..+.+.+ . ++|+.+-+ -+...++.-.+.|++
T Consensus 47 ~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~----~--~vpiSIDT-~~~~Va~aAl~aGa~ 119 (294)
T 2y5s_A 47 DALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRP----L--NVPLSIDT-YKPAVMRAALAAGAD 119 (294)
T ss_dssp HHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGG----G--CSCEEEEC-CCHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhh----C--CCeEEEEC-CCHHHHHHHHHcCCC
Confidence 344666779999999999875 2 33478887766666677666643 2 35654432 122246666777999
Q ss_pred EEE-cCC--CCCHHHHHHHhCCCeeEEec--CCcCc---c--CCC-HHHHHHHHHHHHHHc---C--CCCeEEecCCCCC
Q 016596 303 VVS-LDW--TVDMAEGRRRLGPDVAVQGN--VDPGA---L--FGS-KDFITNRINDTVRKA---G--RWKHILNLGHGIK 366 (386)
Q Consensus 303 ~l~-~d~--~~dl~e~~~~~g~~~~l~G~--vd~~~---l--~gt-~eev~~~v~~~i~~~---~--~~g~Ils~gc~i~ 366 (386)
+++ +.. ...+.++.+++|-.+++|-. .+... . +.+ .+++.+..++.++.+ | ....||-||-+..
T Consensus 120 iINdVsg~~d~~m~~~~a~~~~~vVlmh~~G~p~tm~~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~~~~IilDPG~Gf~ 199 (294)
T 2y5s_A 120 LINDIWGFRQPGAIDAVRDGNSGLCAMHMLGEPQTMQVGEPDYGDVVTDVRDFLAARAQALRDAGVAAERICVDPGFGFG 199 (294)
T ss_dssp EEEETTTTCSTTHHHHHSSSSCEEEEECCCEETTTTEECCCCCSSHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS
T ss_pred EEEECCCCCchHHHHHHHHhCCCEEEECCCCCCccccccCCccccHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCccc
Confidence 995 332 24577777778776777543 22211 1 233 267777777776655 3 2479999998874
Q ss_pred CCCc-HHHHHHHHHHHHh
Q 016596 367 VGTP-EENVAHFFEVAKA 383 (386)
Q Consensus 367 ~~tp-~Eni~a~~~a~~~ 383 (386)
.+. ..|+. +++..++
T Consensus 200 -kt~~~~n~~-ll~~l~~ 215 (294)
T 2y5s_A 200 -KAVVDDNYA-LLAALPD 215 (294)
T ss_dssp -SCTTHHHHH-HHHTGGG
T ss_pred -ccchHHHHH-HHHHHHH
Confidence 555 77764 4444333
No 48
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=90.28 E-value=7.7 Score=36.00 Aligned_cols=144 Identities=17% Similarity=0.189 Sum_probs=86.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecC----CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDS----WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTG 300 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~----~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g 300 (386)
+..++.++.+++.|||.|-++-. .+..+|++.=.+-+.|..+.+.+.. ++|+.+ +-... .++.-.+.|
T Consensus 33 ~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~-----~vpiSI--DT~~~~Va~aAl~aG 105 (314)
T 2vef_A 33 EQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES-----DVLISI--DTWKSQVAEAALAAG 105 (314)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC-----CCEEEE--ECSCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC-----CceEEE--eCCCHHHHHHHHHcC
Confidence 44556677899999999998752 2235777666666777766665432 456444 32222 467777889
Q ss_pred CCEEE-cCC---CCCHHHHHHHhCCCeeEEec----CCcC--cc------CC---C-----------HHH-HHHHHHHHH
Q 016596 301 VDVVS-LDW---TVDMAEGRRRLGPDVAVQGN----VDPG--AL------FG---S-----------KDF-ITNRINDTV 349 (386)
Q Consensus 301 ~d~l~-~d~---~~dl~e~~~~~g~~~~l~G~----vd~~--~l------~g---t-----------~ee-v~~~v~~~i 349 (386)
++++| +.. ..++.++..++|-.+++|-. .+.. .+ .| | .+| |.+..++.+
T Consensus 106 a~iINDVsg~~~d~~m~~v~a~~~~~vvlmh~~~~g~p~~~~~~~~~~~~~g~~~~~~~~~~y~d~~v~e~v~~~l~~~i 185 (314)
T 2vef_A 106 ADLVNDITGLMGDEKMPHVVAEARAQVVIMFNPVMARPQHPSSLIFPHFGFGQAFTEEELADFETLPIEELMEAFFERAL 185 (314)
T ss_dssp CCEEEETTTTCSCTTHHHHHHHHTCEEEEECCHHHHCTTSTTTTTSCCCCC--CCCC--CHHHHHSCHHHHHHHHHHHHH
T ss_pred CCEEEECCCCCCChHHHHHHHHcCCCEEEEecCCCCCCCCcccccccccccccccccccccccccchHHHHHHHHHHHHH
Confidence 99995 432 25788888889877888742 2211 00 00 1 444 345555554
Q ss_pred HHc---C--CCCeEEecCCCCCCCCcHHHHHHH
Q 016596 350 RKA---G--RWKHILNLGHGIKVGTPEENVAHF 377 (386)
Q Consensus 350 ~~~---~--~~g~Ils~gc~i~~~tp~Eni~a~ 377 (386)
+.+ | ....||-||-+... +...|+..+
T Consensus 186 ~~a~~~GI~~~~IilDPGiGF~k-t~~~nl~ll 217 (314)
T 2vef_A 186 ARAAEAGIAPENILLDPGIGFGL-TKKENLLLL 217 (314)
T ss_dssp HHHHHHTCCGGGEEEECCTTSSC-CHHHHHHHH
T ss_pred HHHHHcCCChhhEEEeCCCCccc-chHHHHHHH
Confidence 443 4 35799999988754 445676444
No 49
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=90.10 E-value=1.4 Score=40.70 Aligned_cols=145 Identities=10% Similarity=0.049 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEE
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVV 304 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l 304 (386)
++-.+++++.+.++|++.|-+.- +.||+....+ ... .+++..+++. ++.++..+.. +..-++...+.|++.+
T Consensus 26 ~e~k~~i~~~L~~~Gv~~IE~g~----~~~~~~~p~~-~d~-~~~~~~~~~~-~~~~~~~l~~-~~~~i~~a~~ag~~~v 97 (298)
T 2cw6_A 26 TPVKIKLIDMLSEAGLSVIETTS----FVSPKWVPQM-GDH-TEVLKGIQKF-PGINYPVLTP-NLKGFEAAVAAGAKEV 97 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEECCEE----CCCTTTCGGG-TTH-HHHHHHSCCC-TTCBCCEECC-SHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCcCEEEECC----CcCccccccc-CCH-HHHHHHHhhC-CCCEEEEEcC-CHHhHHHHHHCCCCEE
Confidence 45566778888899999875432 2333211100 000 1344444442 2444444442 2224788889999988
Q ss_pred EcCCCCC-H--------------------HHHHHHhCCCeeEEecCCc----Ccc-CCCHHHHHHHHHHHHHHcCCCCeE
Q 016596 305 SLDWTVD-M--------------------AEGRRRLGPDVAVQGNVDP----GAL-FGSKDFITNRINDTVRKAGRWKHI 358 (386)
Q Consensus 305 ~~d~~~d-l--------------------~e~~~~~g~~~~l~G~vd~----~~l-~gt~eev~~~v~~~i~~~~~~g~I 358 (386)
.+....+ . -+..+..|. .+.+++-. ..- .-+++++.+.++++.+.+.. .+.
T Consensus 98 ~i~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~--~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~Ga~-~i~ 174 (298)
T 2cw6_A 98 VIFGAASELFTKKNINCSIEESFQRFDAILKAAQSANI--SVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMGCY-EIS 174 (298)
T ss_dssp EEEEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTC--EEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTTCS-EEE
T ss_pred EEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCC--eEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcCCC-EEE
Confidence 7632221 1 122223443 34444432 111 46788888888777765423 333
Q ss_pred EecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 359 LNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 359 ls~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
|. ..+ .-..|+.+..+++++++
T Consensus 175 l~--DT~-G~~~P~~~~~lv~~l~~ 196 (298)
T 2cw6_A 175 LG--DTI-GVGTPGIMKDMLSAVMQ 196 (298)
T ss_dssp EE--ETT-SCCCHHHHHHHHHHHHH
T ss_pred ec--CCC-CCcCHHHHHHHHHHHHH
Confidence 33 222 23456667777777764
No 50
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=90.01 E-value=3.9 Score=37.63 Aligned_cols=140 Identities=15% Similarity=0.107 Sum_probs=76.1
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch----HHHHHhc
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL----LERLALT 299 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~----l~~l~e~ 299 (386)
-++-.+++++.+.++|.+.|=+.-+. .+|+.|+. .+++.+.. ++..+..+.-+...- ++.+.+.
T Consensus 25 ~~~~K~~i~~~L~~~Gv~~IE~g~p~---~~~~d~e~-----v~~i~~~~----~~~~i~~l~~~~~~di~~a~~~~~~a 92 (293)
T 3ewb_X 25 DVKEKIQIALQLEKLGIDVIEAGFPI---SSPGDFEC-----VKAIAKAI----KHCSVTGLARCVEGDIDRAEEALKDA 92 (293)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECGG---GCHHHHHH-----HHHHHHHC----CSSEEEEEEESSHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCC---CCccHHHH-----HHHHHHhc----CCCEEEEEecCCHHHHHHHHHHHhhc
Confidence 34556678888889999988765333 36766664 23444433 245555555333222 3444456
Q ss_pred CCCEEEcCC-----------CCCHHHH----------HHHhCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCe
Q 016596 300 GVDVVSLDW-----------TVDMAEG----------RRRLGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKH 357 (386)
Q Consensus 300 g~d~l~~d~-----------~~dl~e~----------~~~~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~ 357 (386)
|++.+++.. ..+.++. .+..|.++.+ +. ..- ..+++.+.+.++++.+.+ -.
T Consensus 93 g~~~v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~--~~--~d~~~~~~~~~~~~~~~~~~~G---~~ 165 (293)
T 3ewb_X 93 VSPQIHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQF--SP--EDATRSDRAFLIEAVQTAIDAG---AT 165 (293)
T ss_dssp SSEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEE--EE--ETGGGSCHHHHHHHHHHHHHTT---CC
T ss_pred CCCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEE--Ee--ccCCCCCHHHHHHHHHHHHHcC---CC
Confidence 887765421 1222222 2223433322 21 122 567888888888777653 23
Q ss_pred EEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 358 ILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 358 Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
.++....+- -..|+.+..+++++++
T Consensus 166 ~i~l~DT~G-~~~P~~v~~lv~~l~~ 190 (293)
T 3ewb_X 166 VINIPDTVG-YTNPTEFGQLFQDLRR 190 (293)
T ss_dssp EEEEECSSS-CCCHHHHHHHHHHHHH
T ss_pred EEEecCCCC-CCCHHHHHHHHHHHHH
Confidence 444443433 3456668888887765
No 51
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=89.94 E-value=3 Score=38.44 Aligned_cols=147 Identities=16% Similarity=0.197 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHhCCCEEEEec-C---CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFD-S---WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVD 302 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d-~---~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d 302 (386)
..++.++.+++.|||.|-++- + .+..+|++.=-+-+.|..+.+.+ . ++|+.+-+- +...++.-.+.|++
T Consensus 53 ~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~----~--~vpiSIDT~-~~~Va~aAl~aGa~ 125 (294)
T 2dqw_A 53 RALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLS----L--GVPVSVDTR-KPEVAEEALKLGAH 125 (294)
T ss_dssp CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHT----T--CSCEEEECS-CHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHh----C--CCeEEEECC-CHHHHHHHHHhCCC
Confidence 344566779999999998875 2 23467776655556666665543 2 456544321 22246666777999
Q ss_pred EEE-cCCC--CCHHHHHHHhCCCeeEEecC--CcCcc-----CCCH-HHHHHHHHHHHHHc---C-CCCeEEecCCCCCC
Q 016596 303 VVS-LDWT--VDMAEGRRRLGPDVAVQGNV--DPGAL-----FGSK-DFITNRINDTVRKA---G-RWKHILNLGHGIKV 367 (386)
Q Consensus 303 ~l~-~d~~--~dl~e~~~~~g~~~~l~G~v--d~~~l-----~gt~-eev~~~v~~~i~~~---~-~~g~Ils~gc~i~~ 367 (386)
+++ +... ..+.++.+++|-.+++|-.= .|..+ +.+. +|+.+..++.++.+ | . ..||-||-++ .
T Consensus 126 iINdVsg~~d~~m~~v~a~~~~~vVlmh~~eG~p~tm~~~~~y~dv~~ev~~~l~~~i~~a~~~Gi~-~IilDPG~Gf-~ 203 (294)
T 2dqw_A 126 LLNDVTGLRDERMVALAARHGVAAVVMHMPVPDPATMMAHARYRDVVAEVKAFLEAQARRALSAGVP-QVVLDPGFGF-G 203 (294)
T ss_dssp EEECSSCSCCHHHHHHHHHHTCEEEEECCSSSCTTTGGGGCCCSSHHHHHHHHHHHHHHHHHHTTCS-CEEEECCTTS-S
T ss_pred EEEECCCCCChHHHHHHHHhCCCEEEEcCCCCCCccccccCccccHHHHHHHHHHHHHHHHHHCCCC-cEEEcCCCCc-c
Confidence 985 3222 24666677788777776531 13222 2332 67777777777665 3 4 7999999886 3
Q ss_pred CCcHHHHHHHHHHHHh
Q 016596 368 GTPEENVAHFFEVAKA 383 (386)
Q Consensus 368 ~tp~Eni~a~~~a~~~ 383 (386)
.+...|+. +++..++
T Consensus 204 kt~~~n~~-ll~~l~~ 218 (294)
T 2dqw_A 204 KLLEHNLA-LLRRLDE 218 (294)
T ss_dssp CCHHHHHH-HHHTHHH
T ss_pred cCHHHHHH-HHHHHHH
Confidence 45556664 3444433
No 52
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=89.91 E-value=2.5 Score=37.83 Aligned_cols=99 Identities=16% Similarity=0.198 Sum_probs=63.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCc------CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWA------TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVD 302 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~------~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d 302 (386)
.+.++..++.|++.|++-+... +-++++.+.+. .+++.+..+++ ++++++|- .++...++|+|
T Consensus 46 ~~~~~~al~~Gv~~vqlR~K~~~~~~~~~~l~~~~~~~~----a~~l~~l~~~~--~~~liInd-----~~~lA~~~gAd 114 (243)
T 3o63_A 46 AQFAEAALAGGVDIIQLRDKGSPGELRFGPLQARDELAA----CEILADAAHRY--GALFAVND-----RADIARAAGAD 114 (243)
T ss_dssp HHHHHHHHHTTCSEEEECCTTCHHHHHHCSCCHHHHHHH----HHHHHHHHHHT--TCEEEEES-----CHHHHHHHTCS
T ss_pred HHHHHHHHHCCCCEEEEccCCCCccccccCCCHHHHHHH----HHHHHHHHHhh--CCEEEEeC-----HHHHHHHhCCC
Confidence 3445567789999999876542 23677776664 34556666665 57877762 34566788999
Q ss_pred EEEcCCC-CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHH
Q 016596 303 VVSLDWT-VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNR 344 (386)
Q Consensus 303 ~l~~d~~-~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~ 344 (386)
.+++... .+..++++.++....+... -.|++|+.+.
T Consensus 115 GVHLg~~dl~~~~~r~~~~~~~~iG~S------~ht~~Ea~~A 151 (243)
T 3o63_A 115 VLHLGQRDLPVNVARQILAPDTLIGRS------THDPDQVAAA 151 (243)
T ss_dssp EEEECTTSSCHHHHHHHSCTTCEEEEE------ECSHHHHHHH
T ss_pred EEEecCCcCCHHHHHHhhCCCCEEEEe------CCCHHHHHHH
Confidence 9998654 5678888887754333222 2566665443
No 53
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.69 E-value=8.2 Score=35.24 Aligned_cols=107 Identities=16% Similarity=0.254 Sum_probs=64.8
Q ss_pred HHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 016596 165 KALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQ 244 (386)
Q Consensus 165 ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~ 244 (386)
+.++...+..++++||+..+++.- ++-.++.++...++|+|++.
T Consensus 57 ~v~~~~~~~~~gr~pviaGvg~~~------------------------------------t~~ai~la~~a~~~Gadavl 100 (289)
T 2yxg_A 57 KVIEKVVDVVNGRVQVIAGAGSNC------------------------------------TEEAIELSVFAEDVGADAVL 100 (289)
T ss_dssp HHHHHHHHHHTTSSEEEEECCCSS------------------------------------HHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhCCCCcEEEeCCCCC------------------------------------HHHHHHHHHHHHhcCCCEEE
Confidence 445555666677899988776531 12234566667789999999
Q ss_pred EecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHH-hcCCCEEEc-CCCCCHHHH
Q 016596 245 IFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLA-LTGVDVVSL-DWTVDMAEG 315 (386)
Q Consensus 245 i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~-e~g~d~l~~-d~~~dl~e~ 315 (386)
+.-|...-.|+ +=+.-|++++.++. +.|++++.. |.. . .+..+. +.+ +++.+ +...|+...
T Consensus 101 v~~P~y~~~s~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p-nivgiK~s~gd~~~~ 170 (289)
T 2yxg_A 101 SITPYYNKPTQ----EGLRKHFGKVAESI-----NLPIVLYNVPSRTAVNLEPKTVKLLAEEYS-NISAVKEANPNLSQV 170 (289)
T ss_dssp EECCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCT-TEEEEEECCSCTHHH
T ss_pred ECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCcCCCHHHHHHHHHhCC-CEEEEEeCCCCHHHH
Confidence 87776544454 34455777887765 468888764 432 2 245555 553 56655 334455444
Q ss_pred HH
Q 016596 316 RR 317 (386)
Q Consensus 316 ~~ 317 (386)
.+
T Consensus 171 ~~ 172 (289)
T 2yxg_A 171 SE 172 (289)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 54
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=89.68 E-value=2.2 Score=39.25 Aligned_cols=146 Identities=11% Similarity=0.049 Sum_probs=83.8
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCE
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDV 303 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~ 303 (386)
-++..++.++++.++|++.|-+.-+..+-.-|.+ + ...++++.+.+. ++.++..|. .+..-++...+.|++.
T Consensus 24 ~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~-~-----~~~e~~~~i~~~-~~~~v~~l~-~n~~~i~~a~~~G~~~ 95 (295)
T 1ydn_A 24 PTADKIALINRLSDCGYARIEATSFVSPKWVPQL-A-----DSREVMAGIRRA-DGVRYSVLV-PNMKGYEAAAAAHADE 95 (295)
T ss_dssp CHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGG-T-----THHHHHHHSCCC-SSSEEEEEC-SSHHHHHHHHHTTCSE
T ss_pred CHHHHHHHHHHHHHcCcCEEEEccCcCccccccc-c-----CHHHHHHHHHhC-CCCEEEEEe-CCHHHHHHHHHCCCCE
Confidence 3455667777888899999876533222111211 0 122334444443 357777886 3333478888999998
Q ss_pred EEcCC-----------CCC----HHH------HHHHhCCCeeEEecCCcC----c-cCCCHHHHHHHHHHHHHHcCCCCe
Q 016596 304 VSLDW-----------TVD----MAE------GRRRLGPDVAVQGNVDPG----A-LFGSKDFITNRINDTVRKAGRWKH 357 (386)
Q Consensus 304 l~~d~-----------~~d----l~e------~~~~~g~~~~l~G~vd~~----~-l~gt~eev~~~v~~~i~~~~~~g~ 357 (386)
+.++- ..+ ++. ..+..|- .+.|.|... . -.-+++++.+.++++.+.+.+ .+
T Consensus 96 V~i~~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~--~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G~d-~i 172 (295)
T 1ydn_A 96 IAVFISASEGFSKANINCTIAESIERLSPVIGAAINDGL--AIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLGCH-EV 172 (295)
T ss_dssp EEEEEESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTC--EEEEEEECSSEETTTEECCHHHHHHHHHHHHHHTCS-EE
T ss_pred EEEEEecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCC--eEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcCCC-EE
Confidence 87652 112 221 2223443 455444332 1 257899999999888776434 45
Q ss_pred EEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 358 ILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 358 Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
-|+...|+ ..|+.+..+++++++
T Consensus 173 ~l~Dt~G~---~~P~~~~~lv~~l~~ 195 (295)
T 1ydn_A 173 SLGDTIGR---GTPDTVAAMLDAVLA 195 (295)
T ss_dssp EEEETTSC---CCHHHHHHHHHHHHT
T ss_pred EecCCCCC---cCHHHHHHHHHHHHH
Confidence 55544444 356667777777764
No 55
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=89.67 E-value=2 Score=39.84 Aligned_cols=138 Identities=14% Similarity=0.206 Sum_probs=80.0
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec--CCc--------c----hHHHHH
Q 016596 232 VQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS--GSG--------G----LLERLA 297 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c--G~~--------~----~l~~l~ 297 (386)
++..++.|+|.+.+.--++.-.+. .--....+++.+.++++ |.|+++-+- |.. . ....+.
T Consensus 114 ve~a~~~GAdaV~vlv~~~~d~~~----~~~~~~i~~v~~~~~~~--G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~ 187 (304)
T 1to3_A 114 AQAVKRDGAKALKLLVLWRSDEDA----QQRLNMVKEFNELCHSN--GLLSIIEPVVRPPRCGDKFDREQAIIDAAKELG 187 (304)
T ss_dssp HHHHHHTTCCEEEEEEEECTTSCH----HHHHHHHHHHHHHHHTT--TCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHT
T ss_pred HHHHHHcCCCEEEEEEEcCCCccH----HHHHHHHHHHHHHHHHc--CCcEEEEEECCCCccccCCChhHHHHHHHHHHH
Confidence 345678899998743222211212 22334678899999987 678776542 221 1 134456
Q ss_pred hcCCCEEEcCCC----CCHH---HHHHH----hCCC-eeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecC---
Q 016596 298 LTGVDVVSLDWT----VDMA---EGRRR----LGPD-VAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLG--- 362 (386)
Q Consensus 298 e~g~d~l~~d~~----~dl~---e~~~~----~g~~-~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~g--- 362 (386)
++|+|.+-+... .+.+ ++.+. .+-. +.+.||+ +++++.+.++..++. +..|++++-.
T Consensus 188 ~lGaD~iKv~~~~~~~g~~~~~~~vv~~~~~~~~~P~Vv~aGG~-------~~~~~~~~~~~a~~a-Ga~Gv~vGRaI~q 259 (304)
T 1to3_A 188 DSGADLYKVEMPLYGKGARSDLLTASQRLNGHINMPWVILSSGV-------DEKLFPRAVRVAMEA-GASGFLAGRAVWS 259 (304)
T ss_dssp TSSCSEEEECCGGGGCSCHHHHHHHHHHHHHTCCSCEEECCTTS-------CTTTHHHHHHHHHHT-TCCEEEESHHHHG
T ss_pred HcCCCEEEeCCCcCCCCCHHHHHHHHHhccccCCCCeEEEecCC-------CHHHHHHHHHHHHHc-CCeEEEEehHHhC
Confidence 789999876653 2443 44444 3444 7778887 456777888888875 4456666542
Q ss_pred CCCCCCCcHHHH--------HHHHHHHHh
Q 016596 363 HGIKVGTPEENV--------AHFFEVAKA 383 (386)
Q Consensus 363 c~i~~~tp~Eni--------~a~~~a~~~ 383 (386)
..+..+-|.+-+ +++.+.+++
T Consensus 260 ~~~~~~dp~~~~~~~~~~~~~~l~~iv~~ 288 (304)
T 1to3_A 260 SVIGLPDTELMLRDVSAPKLQRLGEIVDE 288 (304)
T ss_dssp GGTTCSCHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ccccCCCHHHHHHhhchHHHHHHHHHHhc
Confidence 112213334434 788777765
No 56
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=89.10 E-value=5 Score=35.32 Aligned_cols=91 Identities=9% Similarity=0.095 Sum_probs=55.1
Q ss_pred HHHHHHHHHhCCCEEEEecC-CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe----c--CCcc-hHHHHHhcC
Q 016596 229 AKYVQYQADNGAQAVQIFDS-WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA----S--GSGG-LLERLALTG 300 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~-~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~----c--G~~~-~l~~l~e~g 300 (386)
.+-++.+.+.|+|++.++-- -.+-+. .+..+++++.++ +.++.+|- | -+.. -++.++++|
T Consensus 79 ~~Di~~~~~~GadGvV~G~Lt~dg~iD--------~~~~~~Li~~a~----~~~vTFHRAFD~~~~~d~~~ale~L~~lG 146 (224)
T 2bdq_A 79 EEDILRAVELESDALVLGILTSNNHID--------TEAIEQLLPATQ----GLPLVFHMAFDVIPKSDQKKSIDQLVALG 146 (224)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSSBC--------HHHHHHHHHHHT----TCCEEECGGGGGSCTTTHHHHHHHHHHTT
T ss_pred HHHHHHHHHcCCCEEEEeeECCCCCcC--------HHHHHHHHHHhC----CCeEEEECchhccCCcCHHHHHHHHHHcC
Confidence 34455678899999987531 122344 466778888775 45889995 3 3333 378999999
Q ss_pred CCEE-EcCCCC---------CHHHHHHHhCCCeeEE--ecCCc
Q 016596 301 VDVV-SLDWTV---------DMAEGRRRLGPDVAVQ--GNVDP 331 (386)
Q Consensus 301 ~d~l-~~d~~~---------dl~e~~~~~g~~~~l~--G~vd~ 331 (386)
++-+ .-.... -++++.+..++++.|+ |||.+
T Consensus 147 v~rILTSG~~~~~~a~~g~~~L~~Lv~~a~~ri~Im~GgGV~~ 189 (224)
T 2bdq_A 147 FTRILLHGSSNGEPIIENIKHIKALVEYANNRIEIMVGGGVTA 189 (224)
T ss_dssp CCEEEECSCSSCCCGGGGHHHHHHHHHHHTTSSEEEECSSCCT
T ss_pred CCEEECCCCCCCCcHHHHHHHHHHHHHhhCCCeEEEeCCCCCH
Confidence 9855 222111 1344545556666665 56654
No 57
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=89.05 E-value=9.4 Score=34.89 Aligned_cols=126 Identities=18% Similarity=0.180 Sum_probs=69.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~ 301 (386)
++.++...++|+|++.+.-|...-.|++ =+.-|++++.++. +.|++++.. |.. . .+..+.+.+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~----~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p- 155 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVTPYYNRPSQE----GLYQHFKAIAEHT-----DLPQILYNVPSRTGCDLLPETVGRLAKVK- 155 (292)
T ss_dssp HHHHHHTTTSSCSEEEEECCCSSCCCHH----HHHHHHHHHHTTC-----SSCEEEECCHHHHSCCCCHHHHHHHHTST-
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEeCcchhccCCCHHHHHHHHcCC-
Confidence 3555666778999999877765444543 3445667776654 468888764 432 2 244555553
Q ss_pred CEEEc-CCCCCHHHHHHHh---CCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHH
Q 016596 302 DVVSL-DWTVDMAEGRRRL---GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHF 377 (386)
Q Consensus 302 d~l~~-d~~~dl~e~~~~~---g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~ 377 (386)
+++.+ +...|+....+.. +++..++.|-|. .+ ...+. .|+.|+|-+.++- -|+-+.+|
T Consensus 156 nivgiK~s~gd~~~~~~~~~~~~~~f~v~~G~d~--------~~----~~~l~-~G~~G~is~~~n~-----~P~~~~~l 217 (292)
T 2ojp_A 156 NIIGIXEATGNLTRVNQIKELVSDDFVLLSGDDA--------SA----LDFMQ-YGGHGVISVTANV-----AARDMAQM 217 (292)
T ss_dssp TEEEC-CCSCCTHHHHHHHTTSCTTSBCEESCGG--------GH----HHHHH-TTCCEEEESGGGT-----CHHHHHHH
T ss_pred CEEEEeCCCCCHHHHHHHHHhcCCCEEEEECcHH--------HH----HHHHH-CCCcEEEeCHHHh-----hHHHHHHH
Confidence 67766 4445766655544 333333333332 11 11222 3445677666543 34556666
Q ss_pred HHHHH
Q 016596 378 FEVAK 382 (386)
Q Consensus 378 ~~a~~ 382 (386)
+++++
T Consensus 218 ~~a~~ 222 (292)
T 2ojp_A 218 CKLAA 222 (292)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66554
No 58
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=88.99 E-value=8.6 Score=35.46 Aligned_cols=126 Identities=18% Similarity=0.155 Sum_probs=70.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHH-hcC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLA-LTG 300 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~-e~g 300 (386)
++.++...++|+|++.+.-|...-.|+ +=+.-|++++.++. +.|++++.. |.. . .+..+. +.+
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~p 167 (306)
T 1o5k_A 97 LKLVKQAEKLGANGVLVVTPYYNKPTQ----EGLYQHYKYISERT-----DLGIVVYNVPGRTGVNVLPETAARIAADLK 167 (306)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCH----HHHHHHHHHHHTTC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCT
T ss_pred HHHHHHHHhcCCCEEEECCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEeCccccCcCCCHHHHHHHHHhCC
Confidence 556667778999999987776544454 33445667776654 468888763 432 2 245555 553
Q ss_pred CCEEEc-CCCCCHHHHH---HHhCC---CeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHH
Q 016596 301 VDVVSL-DWTVDMAEGR---RRLGP---DVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEEN 373 (386)
Q Consensus 301 ~d~l~~-d~~~dl~e~~---~~~g~---~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~En 373 (386)
+++.+ +...|+.... +..++ +..+..|-|...+ ..+. .|+.|+|-+.+|- -|+-
T Consensus 168 -nIvgiKdssgd~~~~~~~~~~~~~~~~~f~v~~G~d~~~l------------~~l~-~G~~G~is~~an~-----~P~~ 228 (306)
T 1o5k_A 168 -NVVGIXEANPDIDQIDRTVSLTKQARSDFMVWSGNDDRTF------------YLLC-AGGDGVISVVSNV-----APKQ 228 (306)
T ss_dssp -TEEEEEECCCCHHHHHHHHHHHHHHCTTCEEEESSGGGHH------------HHHH-HTCCEEEESGGGT-----CHHH
T ss_pred -CEEEEeCCCCCHHHHHHHHHhcCCCCCcEEEEECcHHHHH------------HHHH-CCCCEEEecHHHh-----hHHH
Confidence 66666 4445665443 33443 4555555543221 1122 2345666665543 3455
Q ss_pred HHHHHHHHH
Q 016596 374 VAHFFEVAK 382 (386)
Q Consensus 374 i~a~~~a~~ 382 (386)
+.+|+++++
T Consensus 229 ~~~l~~a~~ 237 (306)
T 1o5k_A 229 MVELCAEYF 237 (306)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 556665544
No 59
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=88.98 E-value=2.8 Score=36.14 Aligned_cols=126 Identities=13% Similarity=0.126 Sum_probs=74.0
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEEEcC
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVVSLD 307 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l~~d 307 (386)
+++.+.++|+|++.+.+.. .. ...+++++.++++ |.++++-..+-++ .+..+.+.|+|.+.++
T Consensus 69 ~~~~~~~~Gad~v~v~~~~----~~--------~~~~~~~~~~~~~--g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVT----DV--------LTIQSCIRAAKEA--GKQVVVDMICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHHTTCSEEEEETTS----CH--------HHHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHhcCCCEEEEeCCC----Ch--------hHHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 3778889999999885432 11 2456777888887 4565543222222 3677888999988654
Q ss_pred CC--------CC---HHHHHHHhCC-CeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHH
Q 016596 308 WT--------VD---MAEGRRRLGP-DVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVA 375 (386)
Q Consensus 308 ~~--------~d---l~e~~~~~g~-~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~ 375 (386)
.. .+ ++++++.+++ .+...|||++. .++++++. |-.++++++.= +..+-|.+.++
T Consensus 135 ~g~~g~~~~~~~~~~i~~l~~~~~~~~i~~~gGI~~~-----------~~~~~~~~-Gad~vvvGsai-~~~~d~~~~~~ 201 (211)
T 3f4w_A 135 TGTDQQAAGRKPIDDLITMLKVRRKARIAVAGGISSQ-----------TVKDYALL-GPDVVIVGSAI-THAADPAGEAR 201 (211)
T ss_dssp CCHHHHHTTCCSHHHHHHHHHHCSSCEEEEESSCCTT-----------THHHHHTT-CCSEEEECHHH-HTCSSHHHHHH
T ss_pred CCCcccccCCCCHHHHHHHHHHcCCCcEEEECCCCHH-----------HHHHHHHc-CCCEEEECHHH-cCCCCHHHHHH
Confidence 21 13 3455666533 35668888642 23334433 33356665431 12234778888
Q ss_pred HHHHHHHh
Q 016596 376 HFFEVAKA 383 (386)
Q Consensus 376 a~~~a~~~ 383 (386)
.+.+..++
T Consensus 202 ~l~~~~~~ 209 (211)
T 3f4w_A 202 KISQVLLQ 209 (211)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 88777664
No 60
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=88.44 E-value=7.3 Score=35.29 Aligned_cols=79 Identities=22% Similarity=0.248 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhh---------HHHHHHHHHHHHhhCCCCcEEEEecCCc------c
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFS---------LPYLKQIVDTVKQTHPDLSLILYASGSG------G 291 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~---------~P~~k~l~~~i~~~~~~~~~~~H~cG~~------~ 291 (386)
..+.++++.++|+|.|-+.-|+.. +..-...++-. ....-++++.+++....+|+++..--|. .
T Consensus 34 ~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e 113 (267)
T 3vnd_A 34 SLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFANGID 113 (267)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHH
Confidence 456677788999999887644432 23322223221 1123345555655422568666543221 2
Q ss_pred -hHHHHHhcCCCEEEc
Q 016596 292 -LLERLALTGVDVVSL 306 (386)
Q Consensus 292 -~l~~l~e~g~d~l~~ 306 (386)
+++.+++.|+|++-+
T Consensus 114 ~f~~~~~~aGvdgvii 129 (267)
T 3vnd_A 114 EFYTKAQAAGVDSVLI 129 (267)
T ss_dssp HHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHcCCCEEEe
Confidence 467778899998654
No 61
>3nl6_A Thiamine biosynthetic bifunctional enzyme; thiamin biosynthesis, eukaryoyes, transferase; HET: TPS ACP; 2.61A {Candida glabrata} PDB: 3nl2_A* 3nl5_A* 3nl3_A* 3nm3_A* 3nm1_A*
Probab=88.35 E-value=4 Score=41.01 Aligned_cols=96 Identities=22% Similarity=0.239 Sum_probs=63.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT 309 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~ 309 (386)
+.+++.++.|++.|++-+... +.+.|.+ ..+++.+..+++ ++++++|- .++...++|+|.+|+.+.
T Consensus 29 ~~ve~al~~Gv~~vQlR~K~~---~~~~~~~----~a~~l~~l~~~~--~v~liIND-----~~dlA~~~gAdGVHLgq~ 94 (540)
T 3nl6_A 29 GQVEAGLQNGVTLVQIREKDA---DTKFFIE----EALQIKELCHAH--NVPLIIND-----RIDVAMAIGADGIHVGQD 94 (540)
T ss_dssp HHHHHHHHTTCSEEEECCSSS---CTTHHHH----HHHHHHHHHHHT--TCCEEECS-----CSHHHHHTTCSEEEECTT
T ss_pred HHHHHHHHCCCCEEEEecCCC---CHHHHHH----HHHHHHHHHHhc--CCEEEEeC-----cHHHHHHcCCCEEEEChh
Confidence 445567789999999876542 4444433 345555666665 57877763 457778899999999764
Q ss_pred -CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHH
Q 016596 310 -VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRI 345 (386)
Q Consensus 310 -~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v 345 (386)
.++.++++.+|.+..+...+ .|++|+++..
T Consensus 95 dl~~~~ar~~lg~~~iiG~S~------ht~eea~~A~ 125 (540)
T 3nl6_A 95 DMPIPMIRKLVGPDMVIGWSV------GFPEEVDELS 125 (540)
T ss_dssp SSCHHHHHHHHCTTSEEEEEE------CSHHHHHHHH
T ss_pred hcCHHHHHHHhCCCCEEEEEC------CCHHHHHHHH
Confidence 57899999988654443222 3677765543
No 62
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=88.30 E-value=2.4 Score=39.10 Aligned_cols=70 Identities=17% Similarity=0.108 Sum_probs=46.6
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H---HHHHhcCCCE
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L---ERLALTGVDV 303 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l---~~l~e~g~d~ 303 (386)
..++++.+.++|+|.|.++|..+. ..|+...+. ++.+++..+++++.+|.+.+... . -.-.+.|++.
T Consensus 161 ~~~~~~~~~~~G~d~i~l~DT~G~-~~P~~~~~l--------v~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~ 231 (302)
T 2ftp_A 161 VAWVARELQQMGCYEVSLGDTIGV-GTAGATRRL--------IEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAV 231 (302)
T ss_dssp HHHHHHHHHHTTCSEEEEEESSSC-CCHHHHHHH--------HHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCC-cCHHHHHHH--------HHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCE
Confidence 344445567889999999987764 678776654 44455443346899999776652 3 2335689998
Q ss_pred EEc
Q 016596 304 VSL 306 (386)
Q Consensus 304 l~~ 306 (386)
++.
T Consensus 232 vd~ 234 (302)
T 2ftp_A 232 FDS 234 (302)
T ss_dssp EEE
T ss_pred EEe
Confidence 853
No 63
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=88.22 E-value=16 Score=33.93 Aligned_cols=127 Identities=12% Similarity=0.079 Sum_probs=78.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhC--CCEEEEe-cCCcCCCCHH----HHHHhhHHHHHHHHHHHHhhC--CCCcEEEEecC
Q 016596 218 HALLRKFTTSMAKYVQYQADNG--AQAVQIF-DSWATELSPV----DFEEFSLPYLKQIVDTVKQTH--PDLSLILYASG 288 (386)
Q Consensus 218 ~~ll~~~~~~~~~~~~~~~e~G--~d~i~i~-d~~~~~iSp~----~f~ef~~P~~k~l~~~i~~~~--~~~~~~~H~cG 288 (386)
.++.+.+.++....++.+.+.| ++.+++. +...+++-|. .++ -...++++.++++|+.. ++.++++|.+.
T Consensus 104 ~~~~~~~~~yt~~v~~~l~~~g~~v~~v~vGNE~~~G~lwp~g~~~~~~-~l~~~~~~a~~avr~~~~~p~~~v~~h~~~ 182 (334)
T 1fob_A 104 GTLKWQLYNYTLEVCNTFAENDIDIEIISIGNEIRAGLLWPLGETSSYS-NIGALLHSGAWGVKDSNLATTPKIMIHLDD 182 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGCSSBTTTSTTCHH-HHHHHHHHHHHHHHTSCCSSCCEEEEEESC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEeecCcccccCCCCcchhHH-HHHHHHHHHHHHHHHhccCCCCeEEEEcCC
Confidence 3456666666666667777776 4566555 3444444221 123 44567888888999876 66688999983
Q ss_pred --Ccc----hHHHHHhcC------CCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCC
Q 016596 289 --SGG----LLERLALTG------VDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWK 356 (386)
Q Consensus 289 --~~~----~l~~l~e~g------~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g 356 (386)
+.. +++.+.+.| +|++++....- +. + .++++.+.+.++++.+..+..-
T Consensus 183 ~~~~~~~~~~~~~~~~~g~~~~~~~DvIG~syYp~-------w~----------~---~~~~~~l~~~l~~~~~rygKpv 242 (334)
T 1fob_A 183 GWSWDQQNYFYETVLATGELLSTDFDYFGVSYYPF-------YS----------A---SATLASLKTSLANLQSTYDKPV 242 (334)
T ss_dssp TTCHHHHHHHHHHHHHTSSSCGGGCCEEEEECCSS-------SC----------T---TCCHHHHHHHHHHHHHHHCCCE
T ss_pred cCchHHHHHHHHHHHHcCCCCCCCcCEEEEeCCCC-------cC----------C---CCCHHHHHHHHHHHHHHHCCCE
Confidence 221 246666655 47776654431 00 0 2578888888888878776556
Q ss_pred eEEecCCCC
Q 016596 357 HILNLGHGI 365 (386)
Q Consensus 357 ~Ils~gc~i 365 (386)
+|.=+||.-
T Consensus 243 ~itEtG~~~ 251 (334)
T 1fob_A 243 VVVETNWPV 251 (334)
T ss_dssp EEEECCCCS
T ss_pred EEEEccccc
Confidence 777777754
No 64
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=87.86 E-value=16 Score=33.48 Aligned_cols=94 Identities=18% Similarity=0.215 Sum_probs=54.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~ 301 (386)
++.++...++|+|++.+.-|...-.|+ +=+.-|++++.++.. +.|++++.. |.. . .+..+.+.+
T Consensus 96 i~la~~A~~~Gadavlv~~P~y~~~s~----~~l~~~f~~va~a~~----~lPiilYn~P~~tg~~l~~~~~~~La~~p- 166 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVTPFYYPFSF----EEHCDHYRAIIDSAD----GLPMVVYNIPALSGVKLTLDQINTLVTLP- 166 (303)
T ss_dssp HHHHHHHHHHTCSEEEEECCCSSCCCH----HHHHHHHHHHHHHHT----TCCEEEEECHHHHCCCCCHHHHHHHHTST-
T ss_pred HHHHHHHHhCCCCEEEecCCCCCCCCH----HHHHHHHHHHHHhCC----CCCEEEEeCccccCCCCCHHHHHHHhcCC-
Confidence 456666778899999887776543454 344557788888763 268888763 432 2 244555543
Q ss_pred CEEEc-CCCCCHHHHHHHh--CCCeeEEecCCc
Q 016596 302 DVVSL-DWTVDMAEGRRRL--GPDVAVQGNVDP 331 (386)
Q Consensus 302 d~l~~-d~~~dl~e~~~~~--g~~~~l~G~vd~ 331 (386)
+++.+ +...|+....+.. +++..+..|-|.
T Consensus 167 nIvgiK~s~gd~~~~~~~~~~~~~f~v~~G~d~ 199 (303)
T 2wkj_A 167 GVGALXQTSGDLYQMEQIRREHPDLVLYNGYDN 199 (303)
T ss_dssp TEEEEEECCCCHHHHHHHHHHCTTCEEEECCGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhCCCeEEEeCcHH
Confidence 56655 4445654433322 345655555554
No 65
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=87.80 E-value=17 Score=33.47 Aligned_cols=154 Identities=19% Similarity=0.251 Sum_probs=86.5
Q ss_pred HHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 016596 165 KALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQ 244 (386)
Q Consensus 165 ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~ 244 (386)
+.++...+..++.+||+..+++.- ++-.++.++...++|+|++.
T Consensus 73 ~v~~~~~~~~~grvpviaGvg~~s------------------------------------t~~ai~la~~A~~~Gadavl 116 (304)
T 3cpr_A 73 ELLKAVREEVGDRAKLIAGVGTNN------------------------------------TRTSVELAEAAASAGADGLL 116 (304)
T ss_dssp HHHHHHHHHHTTTSEEEEECCCSC------------------------------------HHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHhCCCCcEEecCCCCC------------------------------------HHHHHHHHHHHHhcCCCEEE
Confidence 344555666677889988776531 22234555667789999999
Q ss_pred EecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHHHH
Q 016596 245 IFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAEGR 316 (386)
Q Consensus 245 i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e~~ 316 (386)
+.-|.-.-.|+ +=+.-|++.+.++. +.|++++.. |.. . .+..+.+.+ +++.+ +...|+....
T Consensus 117 v~~P~y~~~~~----~~l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~~~~~ 186 (304)
T 3cpr_A 117 VVTPYYSKPSQ----EGLLAHFGAIAAAT-----EVPICLYDIPGRSGIPIESDTMRRLSELP-TILAVXDAKGDLVAAT 186 (304)
T ss_dssp EECCCSSCCCH----HHHHHHHHHHHHHC-----CSCEEEEECHHHHSSCCCHHHHHHHTTST-TEEEEEECSCCHHHHH
T ss_pred ECCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCcCCCHHHHHHHHcCC-CEEEEecCCCCHHHHH
Confidence 87776444453 44556778887765 468887764 432 2 244455543 56666 4445766554
Q ss_pred HHhCC-CeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 317 RRLGP-DVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 317 ~~~g~-~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
+.... +..+..|-|... ...+. .|+.|+|-+.+|- -|+-+.+|+++++
T Consensus 187 ~~~~~~~f~v~~G~d~~~------------l~~l~-~G~~G~is~~an~-----~P~~~~~l~~a~~ 235 (304)
T 3cpr_A 187 SLIKETGLAWYSGDDPLN------------LVWLA-LGGSGFISVIGHA-----APTALRELYTSFE 235 (304)
T ss_dssp HHHHHHCCEEEECSGGGH------------HHHHH-TTCCEEEESGGGT-----CHHHHHHHHHHHH
T ss_pred HHHHhcCEEEEECcHHHH------------HHHHH-CCCCEEEecHHHh-----hHHHHHHHHHHHH
Confidence 43311 344444343321 11122 3455777766653 3455666666554
No 66
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=87.77 E-value=8.2 Score=35.47 Aligned_cols=93 Identities=16% Similarity=0.216 Sum_probs=54.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC-c----c--hHHHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS-G----G--LLERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~-~----~--~l~~l~e~g~ 301 (386)
++.++...++|+|++.+.-|...-.|++. +.-|++.+.++. +.|++++..-. + . .+..+.+.+
T Consensus 89 i~la~~a~~~Gadavlv~~P~y~~~~~~~----l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p- 158 (300)
T 3eb2_A 89 VAQAKLYEKLGADGILAILEAYFPLKDAQ----IESYFRAIADAV-----EIPVVIYTNPQFQRSDLTLDVIARLAEHP- 158 (300)
T ss_dssp HHHHHHHHHHTCSEEEEEECCSSCCCHHH----HHHHHHHHHHHC-----SSCEEEEECTTTCSSCCCHHHHHHHHTST-
T ss_pred HHHHHHHHHcCCCEEEEcCCCCCCCCHHH----HHHHHHHHHHHC-----CCCEEEEECccccCCCCCHHHHHHHHcCC-
Confidence 45556677889999988777654445433 445778888776 36777776532 1 1 134445543
Q ss_pred CEEEc-CCCCCHH---HHHHHhCCCeeEEecCCc
Q 016596 302 DVVSL-DWTVDMA---EGRRRLGPDVAVQGNVDP 331 (386)
Q Consensus 302 d~l~~-d~~~dl~---e~~~~~g~~~~l~G~vd~ 331 (386)
+++.+ +...|+. ++.+..+++..+..|-|.
T Consensus 159 nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~d~ 192 (300)
T 3eb2_A 159 RIRYIKDASTNTGRLLSIINRCGDALQVFSASAH 192 (300)
T ss_dssp TEEEEEECSSBHHHHHHHHHHHGGGSEEEECTTS
T ss_pred CEEEEEcCCCCHHHHHHHHHHcCCCeEEEeCcHH
Confidence 56655 3334554 444445555666555554
No 67
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=87.74 E-value=11 Score=35.52 Aligned_cols=116 Identities=12% Similarity=0.173 Sum_probs=71.6
Q ss_pred HHHH--hhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC--CCCHHHHHHH--hCCCeeEEecCC
Q 016596 257 DFEE--FSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW--TVDMAEGRRR--LGPDVAVQGNVD 330 (386)
Q Consensus 257 ~f~e--f~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~--~~dl~e~~~~--~g~~~~l~G~vd 330 (386)
.|++ +-+..++.|.++.++. |.+ ++=..=+..-++.+.+++++++-+.. ..|+.-+++. .|+-+.|.-|
T Consensus 69 ~~~~~el~~e~~~~L~~~~~~~--Gi~-~~st~fD~~svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstG-- 143 (350)
T 3g8r_A 69 RFEETRLQPEQMQKLVAEMKAN--GFK-AICTPFDEESVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTA-- 143 (350)
T ss_dssp HHHHTCCCHHHHHHHHHHHHHT--TCE-EEEEECSHHHHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECT--
T ss_pred HHHHhcCCHHHHHHHHHHHHHc--CCc-EEeccCCHHHHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECC--
Confidence 4553 7788899999999997 444 22222233358999999999997754 3576666553 3433333222
Q ss_pred cCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHH--HHHHHHHHHHhh
Q 016596 331 PGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEE--NVAHFFEVAKAI 384 (386)
Q Consensus 331 ~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~E--ni~a~~~a~~~y 384 (386)
..|.+|+...+.-+.+. + ..+||- =|.-...||++ |+.+|-...+.|
T Consensus 144 ----mstl~Ei~~Ave~i~~~-g-~~viLl-hC~s~YPt~~~~~nL~aI~~Lk~~f 192 (350)
T 3g8r_A 144 ----GARREDIDKVVSFMLHR-G-KDLTIM-HCVAEYPTPDDHLHLARIKTLRQQY 192 (350)
T ss_dssp ----TCCHHHHHHHHHHHHTT-T-CCEEEE-ECCCCSSCCGGGCCTTHHHHHHHHC
T ss_pred ----CCCHHHHHHHHHHHHHc-C-CCEEEE-ecCCCCCCCcccCCHHHHHHHHHHC
Confidence 36899999988776654 3 357774 24433445554 565655444444
No 68
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=87.59 E-value=17 Score=34.41 Aligned_cols=141 Identities=13% Similarity=0.124 Sum_probs=93.5
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc--------chHHHHHhc
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG--------GLLERLALT 299 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~--------~~l~~l~e~ 299 (386)
..+|++.+.+.|...||.+ +.+|+.-.+-+...++++++.+++. |..+++-+-... ..+..|.++
T Consensus 19 ~~~yi~~a~~~Gf~~IFTS-----L~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DIsp~~l~~Lg~s~~dl~~~~~l 91 (372)
T 2p0o_A 19 TIIYIKKMKALGFDGIFTS-----LHIPEDDTSLYRQRLTDLGAIAKAE--KMKIMVDISGEALKRAGFSFDELEPLIEL 91 (372)
T ss_dssp HHHHHHHHHHTTCCEEEEE-----ECCC-----CHHHHHHHHHHHHHHH--TCEEEEEECHHHHHTTTCBTTBCHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEcc-----CCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 4478888899999998853 4567777777888999999999998 567777665531 246788999
Q ss_pred CCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCC-C---CCCcHHHHH
Q 016596 300 GVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGI-K---VGTPEENVA 375 (386)
Q Consensus 300 g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i-~---~~tp~Eni~ 375 (386)
|++++=+|...+..+..+.--. +.|.=|..+. |++ ++.++++...+..-+.+ -|+. | .+-+.+-+.
T Consensus 92 Gi~glRLD~Gf~~~eia~ls~n-lkIeLNASti----~~~----~l~~l~~~~~n~~~l~a-~HNFYPr~~TGLs~~~f~ 161 (372)
T 2p0o_A 92 GVTGLRMDYGITIEQMAHASHK-IDIGLNASTI----TLE----EVAELKAHQADFSRLEA-WHNYYPRPETGIGTTFFN 161 (372)
T ss_dssp TCCEEEECSSCCHHHHHHHHTT-SEEEEETTTC----CHH----HHHHHHHTTCCGGGEEE-ECCCCCSTTCSBCHHHHH
T ss_pred CCCEEEEcCCCCHHHHHHHhcC-CEEEEECccC----CHH----HHHHHHHcCCChHHeEE-eeccCCCCCCCCCHHHHH
Confidence 9999999999999888886543 4433333221 233 34445555443333443 2554 2 355888888
Q ss_pred HHHHHHHhhc
Q 016596 376 HFFEVAKAIR 385 (386)
Q Consensus 376 a~~~a~~~yg 385 (386)
..-+..|+||
T Consensus 162 ~~n~~~k~~G 171 (372)
T 2p0o_A 162 EKNRWLKELG 171 (372)
T ss_dssp HHHHHHHHTT
T ss_pred HHHHHHHHCC
Confidence 8888888887
No 69
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=87.56 E-value=16 Score=33.83 Aligned_cols=62 Identities=18% Similarity=0.209 Sum_probs=37.9
Q ss_pred HHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcC
Q 016596 235 QADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLD 307 (386)
Q Consensus 235 ~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d 307 (386)
+.+.|+..|.+...-...++ .+++.++++.+++. +..+.+ +.|... .++.+.+.|++.+.+.
T Consensus 96 ~~~~g~~~i~~~gGe~p~~~--------~~~~~~li~~i~~~--~~~i~~-s~g~l~~e~l~~L~~ag~~~v~i~ 159 (348)
T 3iix_A 96 AVQFGAKTIVLQSGEDPYXM--------PDVISDIVKEIKKM--GVAVTL-SLGEWPREYYEKWKEAGADRYLLR 159 (348)
T ss_dssp HHHTTCSEEEEEESCCGGGT--------THHHHHHHHHHHTT--SCEEEE-ECCCCCHHHHHHHHHHTCCEEECC
T ss_pred HHHCCCCEEEEEeCCCCCcc--------HHHHHHHHHHHHhc--CceEEE-ecCCCCHHHHHHHHHhCCCEEeee
Confidence 44578888877532211222 25677788888875 333332 234433 5789999999987653
No 70
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=87.36 E-value=13 Score=37.46 Aligned_cols=126 Identities=13% Similarity=0.055 Sum_probs=77.1
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCH-HHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhc--CC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSP-VDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALT--GV 301 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp-~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~--g~ 301 (386)
.+..++.++.+++.|||.|-+. +.+..+++ +.++++ .|.. ++.. ++|+.+-+. +...++.-.+. |.
T Consensus 339 ~~~a~~~A~~~v~~GAdiIDIg-pg~~~v~~~ee~~rv-v~~i-------~~~~-~vpisIDT~-~~~v~eaal~~~~G~ 407 (566)
T 1q7z_A 339 EEIVIKEAKTQVEKGAEVLDVN-FGIESQIDVRYVEKI-VQTL-------PYVS-NVPLSLDIQ-NVDLTERALRAYPGR 407 (566)
T ss_dssp CHHHHHHHHHHHHTTCSEEEEE-CSSGGGSCHHHHHHH-HHHH-------HHHT-CSCEEEECC-CHHHHHHHHHHCSSC
T ss_pred HHHHHHHHHHHHHCCCCEEEEC-CCCCCCCHHHHHHHH-HHHH-------HhhC-CceEEEeCC-CHHHHHHHHHhcCCC
Confidence 3566677888999999999987 33333444 333332 3333 3322 567666543 23346666666 99
Q ss_pred CEEE-cCCC----CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC--C--CCeEEecCC
Q 016596 302 DVVS-LDWT----VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--R--WKHILNLGH 363 (386)
Q Consensus 302 d~l~-~d~~----~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~--~--~g~Ils~gc 363 (386)
++++ +... ..+..+.+++|-.+++|-. +.. .-.|.+++.+..++.++.+. | ...|+-||-
T Consensus 408 ~iINdis~~~~~~~~~~~~~~~~g~~vV~m~~-~~~-~p~t~~~~~~~l~~~~~~a~~~Gi~~~IilDPg~ 476 (566)
T 1q7z_A 408 SLFNSAKVDEEELEMKINLLKKYGGTLIVLLM-GKD-VPKSFEERKEYFEKALKILERHDFSDRVIFDPGV 476 (566)
T ss_dssp CEEEEEESCHHHHHHHHHHHHHHCCEEEEESC-SSS-CCCSHHHHHHHHHHHHHHHHHTTCGGGEEEECCC
T ss_pred CEEEECCcchhhHHHHHHHHHHhCCeEEEEeC-CCC-CcCCHHHHHHHHHHHHHHHHHCCCCCcEEEeCCC
Confidence 9884 3322 2345566778876666653 221 33457778888888877764 2 357999987
No 71
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=87.15 E-value=20 Score=33.67 Aligned_cols=66 Identities=26% Similarity=0.417 Sum_probs=42.7
Q ss_pred HHHhCCCEEEEecCC--cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcCCCC
Q 016596 235 QADNGAQAVQIFDSW--ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLDWTV 310 (386)
Q Consensus 235 ~~e~G~d~i~i~d~~--~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d~~~ 310 (386)
+.+.|+..|++...+ ...+ -.+++.++++.+++. +..+.+ ..|... .++.|.+.|++.++++-..
T Consensus 111 ~~~~g~~~i~~~gg~~~p~~~--------~~~~l~~ll~~ik~~--g~~i~~-t~G~l~~e~l~~L~~aGvd~v~i~les 179 (369)
T 1r30_A 111 AKAAGSTRFCMGAAWKNPHER--------DMPYLEQMVQGVKAM--GLEACM-TLGTLSESQAQRLANAGLDYYNHNLDT 179 (369)
T ss_dssp HHHTTCSEEEEEECCSSCCTT--------THHHHHHHHHHHHHT--TSEEEE-ECSSCCHHHHHHHHHHCCCEEECCCBS
T ss_pred HHHcCCcEEEEEeCCCCCCcC--------CHHHHHHHHHHHHHc--CCeEEE-ecCCCCHHHHHHHHHCCCCEEeecCcC
Confidence 345688888876543 2222 246677788888876 444433 566654 4889999999998765333
Q ss_pred C
Q 016596 311 D 311 (386)
Q Consensus 311 d 311 (386)
+
T Consensus 180 ~ 180 (369)
T 1r30_A 180 S 180 (369)
T ss_dssp C
T ss_pred C
Confidence 4
No 72
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=86.89 E-value=8.7 Score=36.51 Aligned_cols=139 Identities=13% Similarity=0.088 Sum_probs=74.1
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchH----HHHHhcC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLL----ERLALTG 300 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l----~~l~e~g 300 (386)
++-.++.++.+.++|++.|=+.-+. .||+.|+.+ +++.+.+ ++..+..+.-++..-+ +.+.+.|
T Consensus 33 ~~~Kl~ia~~L~~~Gv~~IE~g~p~---~~~~d~e~v-----~~i~~~~----~~~~i~~l~r~~~~di~~a~~al~~ag 100 (370)
T 3rmj_A 33 KEEKIRVARQLEKLGVDIIEAGFAA---ASPGDFEAV-----NAIAKTI----TKSTVCSLSRAIERDIRQAGEAVAPAP 100 (370)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEGG---GCHHHHHHH-----HHHHTTC----SSSEEEEEEESSHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCC---CCHHHHHHH-----HHHHHhC----CCCeEEEEecCCHHHHHHHHHHHhhCC
Confidence 4555677778888999987654332 467666542 3443332 2344445543443323 3444588
Q ss_pred CCEEEcCCC-----------CCHHHHHHH----------hCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeE
Q 016596 301 VDVVSLDWT-----------VDMAEGRRR----------LGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHI 358 (386)
Q Consensus 301 ~d~l~~d~~-----------~dl~e~~~~----------~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~I 358 (386)
++.+++... .+.++..+. .|..+. .+ +..- ..+++.+.+-++.+.+.+.. +
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~-~~---~ed~~r~~~~~~~~~~~~~~~~Ga~---~ 173 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVE-FS---CEDALRSEIDFLAEICGAVIEAGAT---T 173 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEE-EE---EETGGGSCHHHHHHHHHHHHHHTCC---E
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEE-Ee---cCCCCccCHHHHHHHHHHHHHcCCC---E
Confidence 887754211 233322222 333322 22 1122 57788888888877776433 4
Q ss_pred EecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 359 LNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 359 ls~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
++....+- -..|+.+..+++++++
T Consensus 174 i~l~DT~G-~~~P~~~~~lv~~l~~ 197 (370)
T 3rmj_A 174 INIPDTVG-YSIPYKTEEFFRELIA 197 (370)
T ss_dssp EEEECSSS-CCCHHHHHHHHHHHHH
T ss_pred EEecCccC-CcCHHHHHHHHHHHHH
Confidence 44433333 3345557777777764
No 73
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=86.88 E-value=18 Score=32.86 Aligned_cols=156 Identities=14% Similarity=0.058 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCc--EEEEecC------C-------
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLS--LILYASG------S------- 289 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~--~~~H~cG------~------- 289 (386)
.+.+.+.++...+.|++.|.+.. ....-+++.|+ .+...++++.+.++++ |+. +.+|.+. +
T Consensus 107 ~~~~~~~i~~A~~lG~~~v~~~~-~~~~~~~~~~~-~~~~~l~~l~~~a~~~--Gv~~~l~~En~~~e~~~~~t~~~~~~ 182 (303)
T 3l23_A 107 MEYWKATAADHAKLGCKYLIQPM-MPTITTHDEAK-LVCDIFNQASDVIKAE--GIATGFGYHNHNMEFNRVATKEQQEK 182 (303)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECS-CCCCCSHHHHH-HHHHHHHHHHHHHHHT--TCTTCEEEECCSGGGSEECCTTTC--
T ss_pred HHHHHHHHHHHHHcCCCEEEECC-CCCCCCHHHHH-HHHHHHHHHHHHHHHC--CCcceEEEccCcceeecccccccccc
Confidence 34445556667778999987742 11224666664 5578999999999987 688 8898775 2
Q ss_pred ------------cc-hHHHHH-hcCCC--EEEcC------CCCCHHHHHHHhCCCeeEEecCCcCccCC-CHHHHHHHHH
Q 016596 290 ------------GG-LLERLA-LTGVD--VVSLD------WTVDMAEGRRRLGPDVAVQGNVDPGALFG-SKDFITNRIN 346 (386)
Q Consensus 290 ------------~~-~l~~l~-e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l~G~vd~~~l~g-t~eev~~~v~ 346 (386)
.. .++.+. +.+.+ .+.+| ...|+.+..+++++++..+=-=| ....| +-+-=-+.+.
T Consensus 183 ~g~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~D~~h~~~~g~d~~~~i~~~~~ri~~vH~kD-~~~~G~~G~id~~~i~ 261 (303)
T 3l23_A 183 VKGNPFAAFMKVGDQIYDLMLKDTDPSKVYFEMDVYWTVMGQNDPVEYMQKHPDRIKVLHIKD-RAVFGQSGMMNFEMIF 261 (303)
T ss_dssp --------CCCCSEEHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHHHHHHCTTTEEEEEECC-SSSTTSSSCCCHHHHH
T ss_pred cccccccccccCchHHHHHHHHhCCchhEEEEEehHHHHHcCCCHHHHHHHhcCcEEEEEecC-CcCCCCCCccCHHHHH
Confidence 22 366664 45544 23444 23589999999998755422112 11134 2111134445
Q ss_pred HHHHHcCCCCeEEecCCCCC-CCCcHHHHHHHHHHHHhhcC
Q 016596 347 DTVRKAGRWKHILNLGHGIK-VGTPEENVAHFFEVAKAIRY 386 (386)
Q Consensus 347 ~~i~~~~~~g~Ils~gc~i~-~~tp~Eni~a~~~a~~~yg~ 386 (386)
+.++..+-.|+|+-.. ..| .+.|.+.++.-++..+++||
T Consensus 262 ~~L~~~gy~G~ivE~~-~~~~~~~p~~~~~~s~~~l~~~~~ 301 (303)
T 3l23_A 262 KQMYANGIKDYFVELE-QMPDGRTQFAGVKDCADYLIKAPF 301 (303)
T ss_dssp HHHHHHTCCCEEECCC-CCTTSCCHHHHHHHHHHHHHHCTT
T ss_pred HHHHHcCCCEEEEEec-CCccCCCHHHHHHHHHHHHHHcCC
Confidence 5666667346765432 122 34589999999999999886
No 74
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=86.83 E-value=15 Score=33.62 Aligned_cols=93 Identities=22% Similarity=0.238 Sum_probs=55.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~ 301 (386)
++.++...++|+|++.+.-|.-.-.|+ +=+.-|++++.++. +.|++++.. |.. . .+..|.+.+
T Consensus 97 i~la~~A~~~Gadavlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p- 166 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVAPYYNKPSQ----EGMYQHFKAIAEST-----PLPVMLYNVPGRSIVQISVDTVVRLSEIE- 166 (301)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCH----HHHHHHHHHHHHTC-----SSCEEEEECHHHHSSCCCHHHHHHHHTST-
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHHcCC-
Confidence 556666778999999887776444454 33445667777655 468888764 322 2 234455543
Q ss_pred CEEEc-CCCCCHH---HHHHHhCCCeeEEecCCc
Q 016596 302 DVVSL-DWTVDMA---EGRRRLGPDVAVQGNVDP 331 (386)
Q Consensus 302 d~l~~-d~~~dl~---e~~~~~g~~~~l~G~vd~ 331 (386)
+++.+ +...|+. ++++..+++..+..|-|.
T Consensus 167 nIvgiKdssgd~~~~~~~~~~~~~~f~v~~G~d~ 200 (301)
T 1xky_A 167 NIVAIKDAGGDVLTMTEIIEKTADDFAVYSGDDG 200 (301)
T ss_dssp TEEEEEECSSCHHHHHHHHHHSCTTCEEEESSGG
T ss_pred CEEEEEcCCCCHHHHHHHHHhcCCCeEEEECcHH
Confidence 56655 3334554 444455666666666664
No 75
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=86.78 E-value=9.3 Score=34.43 Aligned_cols=114 Identities=11% Similarity=0.132 Sum_probs=64.2
Q ss_pred HHHHHHHHHHHhCCCEEEEe--cCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEE
Q 016596 227 SMAKYVQYQADNGAQAVQIF--DSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVV 304 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~--d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l 304 (386)
..+++++++.++|++.+... ++.. ||-.|+.+....++.+.+..++. |.|++-=.... ..++.+.++ ++++
T Consensus 38 ~a~~~a~~l~~~Ga~~vk~~~fkprt---s~~~~~g~~~egl~~l~~~~~~~--Gl~~~te~~d~-~~~~~l~~~-vd~~ 110 (262)
T 1zco_A 38 QIMKVAEFLAEVGIKVLRGGAFKPRT---SPYSFQGYGEKALRWMREAADEY--GLVTVTEVMDT-RHVELVAKY-SDIL 110 (262)
T ss_dssp HHHHHHHHHHHTTCCEEECBSSCCCS---STTSCCCCTHHHHHHHHHHHHHH--TCEEEEECCCG-GGHHHHHHH-CSEE
T ss_pred HHHHHHHHHHHcCCCEEEEEecccCC---CcccccCccHHHHHHHHHHHHHc--CCcEEEeeCCH-HhHHHHHhh-CCEE
Confidence 34456666777999987643 2221 23233333355667777777776 56754333322 236788888 8988
Q ss_pred EcCC--CCCHHHHHHH--hCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHc
Q 016596 305 SLDW--TVDMAEGRRR--LGPDVAVQGNVDPGALFGSKDFITNRINDTVRKA 352 (386)
Q Consensus 305 ~~d~--~~dl~e~~~~--~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~ 352 (386)
-+.. ..+..-+++. +|.-+.|-- .+.+|++|+.+.+..+...+
T Consensus 111 kIga~~~~n~~ll~~~a~~~kPV~lk~-----G~~~t~~e~~~Av~~i~~~G 157 (262)
T 1zco_A 111 QIGARNSQNFELLKEVGKVENPVLLKR-----GMGNTIQELLYSAEYIMAQG 157 (262)
T ss_dssp EECGGGTTCHHHHHHHTTSSSCEEEEC-----CTTCCHHHHHHHHHHHHTTT
T ss_pred EECcccccCHHHHHHHHhcCCcEEEec-----CCCCCHHHHHHHHHHHHHCC
Confidence 7754 3454444443 222121111 12468999999987665543
No 76
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=86.54 E-value=19 Score=32.83 Aligned_cols=121 Identities=17% Similarity=0.216 Sum_probs=69.6
Q ss_pred HHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEE
Q 016596 165 KALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQ 244 (386)
Q Consensus 165 ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~ 244 (386)
+.++...+..++++||+..+++.- ++-.++.++...++|+|++.
T Consensus 61 ~v~~~~~~~~~grvpviaGvg~~~------------------------------------t~~ai~la~~a~~~Gadavl 104 (293)
T 1f6k_A 61 EIFRIAKDEAKDQIALIAQVGSVN------------------------------------LKEAVELGKYATELGYDCLS 104 (293)
T ss_dssp HHHHHHHHHHTTSSEEEEECCCSC------------------------------------HHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHHhCCCCeEEEecCCCC------------------------------------HHHHHHHHHHHHhcCCCEEE
Confidence 445555666677788887765431 12233556667788999998
Q ss_pred EecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHHHH
Q 016596 245 IFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAEGR 316 (386)
Q Consensus 245 i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e~~ 316 (386)
+.-|...-.|. +=+.-|++.+.++. +.|++++.. |.. . .+..+.+.+ +++.+ +...|+....
T Consensus 105 v~~P~y~~~~~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiK~s~gd~~~~~ 174 (293)
T 1f6k_A 105 AVTPFYYKFSF----PEIKHYYDTIIAET-----GSNMIVYSIPFLTGVNMGIEQFGELYKNP-KVLGVKFTAGDFYLLE 174 (293)
T ss_dssp EECCCSSCCCH----HHHHHHHHHHHHHH-----CCCEEEEECHHHHCCCCCHHHHHHHHTST-TEEEEEECSCCHHHHH
T ss_pred ECCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEECccccCcCCCHHHHHHHhcCC-CEEEEEECCCCHHHHH
Confidence 87776443453 44556788888876 357777763 432 2 244555543 56655 3345654433
Q ss_pred HHh--CCCeeEEecCCc
Q 016596 317 RRL--GPDVAVQGNVDP 331 (386)
Q Consensus 317 ~~~--g~~~~l~G~vd~ 331 (386)
+.. +++..+..|-|.
T Consensus 175 ~~~~~~~~f~v~~G~d~ 191 (293)
T 1f6k_A 175 RLKKAYPNHLIWAGFDE 191 (293)
T ss_dssp HHHHHCTTSEEEECCGG
T ss_pred HHHHhCCCeEEEECcHH
Confidence 322 334555555554
No 77
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=86.38 E-value=4.3 Score=37.33 Aligned_cols=71 Identities=20% Similarity=0.169 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGVD 302 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~d 302 (386)
...+.++.+.++|++.|.++|..+ .++|+.+.+++.-. ++..++.++-+|++-+... + ..+ .+.|++
T Consensus 157 ~~~~~~~~~~~~Ga~~i~l~DT~G-~~~P~~~~~lv~~l--------~~~~~~~~i~~H~Hn~~Gla~An~laA~~aGa~ 227 (298)
T 2cw6_A 157 KVAEVTKKFYSMGCYEISLGDTIG-VGTPGIMKDMLSAV--------MQEVPLAALAVHCHDTYGQALANTLMALQMGVS 227 (298)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTS-CCCHHHHHHHHHHH--------HHHSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHcCCCEEEecCCCC-CcCHHHHHHHHHHH--------HHhCCCCeEEEEECCCCchHHHHHHHHHHhCCC
Confidence 334445567788999999998775 57898888765432 2222245789999887652 2 223 467998
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
.++.
T Consensus 228 ~vd~ 231 (298)
T 2cw6_A 228 VVDS 231 (298)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 8753
No 78
>2vc7_A Aryldialkylphosphatase; phosphotriesterase, promiscuous activities, enzyme evolution, hyperthermophilic, lactonase, hydrolase; HET: KCX GOL HT5; 2.05A {Sulfolobus solfataricus} PDB: 2vc5_A*
Probab=86.32 E-value=11 Score=34.20 Aligned_cols=97 Identities=15% Similarity=0.117 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEec--CCcc--hHHHHHhcCCC----EE-EcCCCCCHHHHHHHh--CCCeeEEecCCc
Q 016596 263 LPYLKQIVDTVKQTHPDLSLILYAS--GSGG--LLERLALTGVD----VV-SLDWTVDMAEGRRRL--GPDVAVQGNVDP 331 (386)
Q Consensus 263 ~P~~k~l~~~i~~~~~~~~~~~H~c--G~~~--~l~~l~e~g~d----~l-~~d~~~dl~e~~~~~--g~~~~l~G~vd~ 331 (386)
...+++.++.+++. +.|+++|+. |... .++.+.+.|+. ++ +.....+.+.+++.. |-.+.+-| .
T Consensus 150 ~~~~~~~~~lA~~~--~~pv~iH~~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~-~-- 224 (314)
T 2vc7_A 150 EKVIRAAAIANKET--KVPIITHSNAHNNTGLEQQRILTEEGVDPGKILIGHLGDTDNIDYIKKIADKGSFIGLDR-Y-- 224 (314)
T ss_dssp HHHHHHHHHHHHHH--CCCEEEECCTTTTHHHHHHHHHHHTTCCGGGEEETTGGGCCCHHHHHHHHHTTCEEEECC-T--
T ss_pred HHHHHHHHHHHHHH--CCEEEEeCCCcccChHHHHHHHHHcCCCcccEEEECCCCCCCHHHHHHHHHcCCEEEEeC-C--
Confidence 34556667777776 689999984 2432 46777777763 22 444335677777654 43333332 1
Q ss_pred Ccc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCC
Q 016596 332 GAL-FGSKDFITNRINDTVRKAGRWKHILNLGHG 364 (386)
Q Consensus 332 ~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~ 364 (386)
... +.+.++..+.++++++.+....+++++++.
T Consensus 225 ~~~~~~~~~~~~~~i~~~~~~g~~drilleTD~~ 258 (314)
T 2vc7_A 225 GLDLFLPVDKRNETTLRLIKDGYSDKIMISHDYC 258 (314)
T ss_dssp TCTTTSCHHHHHHHHHHHHHTTCTTTEEECCCCB
T ss_pred CcccCCCHHHHHHHHHHHHHcCCCCeEEEcCCcc
Confidence 122 456678888888888875456899999984
No 79
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=86.24 E-value=7.6 Score=35.78 Aligned_cols=70 Identities=19% Similarity=0.157 Sum_probs=48.0
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 36 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~----~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~Gad 108 (303)
T 2wkj_A 36 RLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLE----IVAEEAKG---KIKLIAHVGCVSTAESQQLAASAKRYGFD 108 (303)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---TSEEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhCCCC
Confidence 4445677899999998877764 699988777554 33444443 4799999877653 23 444568999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 109 avlv 112 (303)
T 2wkj_A 109 AVSA 112 (303)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 7743
No 80
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=86.23 E-value=13 Score=34.31 Aligned_cols=123 Identities=11% Similarity=0.099 Sum_probs=75.9
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC----cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc----hHHHHH
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSW----ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG----LLERLA 297 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~----~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~----~l~~l~ 297 (386)
+...++++.+++.|||.|-+.-.+ +.-.|++.=.+ +++.+.+.. ++|+.+--+||.. .++.-+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~--------vV~~v~~~~-~vplsI~DT~~~~~~~~V~eaal 144 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAE--------VCKAVADAI-DVPLMIIGCGVEEKDAEIFPVIG 144 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHH--------HHHHHHHHC-SSCEEEECCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHH--------HHHHHHHhC-CceEEEECCCCCCCCHHHHHHHH
Confidence 455677778889999999987522 23588876555 344444432 5787665666643 356667
Q ss_pred hcCCC---EEE-cCCC--CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC--CCCeEEecCCCC
Q 016596 298 LTGVD---VVS-LDWT--VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG--RWKHILNLGHGI 365 (386)
Q Consensus 298 e~g~d---~l~-~d~~--~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~--~~g~Ils~gc~i 365 (386)
+.|.+ +++ +... ..+..+...+|-.++++..- +.+..++.+.++. ..| ....|+-||.+.
T Consensus 145 ~aga~~k~iINdvs~~~~~~~~~~aa~~g~~vv~m~~~-------dv~~l~~~~~~a~-~~Gi~~e~IilDPg~g~ 212 (310)
T 2h9a_B 145 EALSGRNCLLSSATKDNYKPIVATCMVHGHSVVASAPL-------DINLSKQLNIMIM-EMNLAPNRIIMDPLIGA 212 (310)
T ss_dssp HHTTTSCCEEEEECTTTHHHHHHHHHHHTCEEEEECSS-------CHHHHHHHHHHHH-TTTCCGGGEEEECCCCC
T ss_pred HhCCCCCCEEEECCCCccHHHHHHHHHhCCCEEEEChh-------HHHHHHHHHHHHH-HCCCChhhEEEeCCCcc
Confidence 78887 664 4332 24556667788767776532 2344444444443 444 367999999884
No 81
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=85.95 E-value=2.8 Score=38.48 Aligned_cols=72 Identities=17% Similarity=0.221 Sum_probs=49.3
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++.+. .+++.+.. .+|++.++.++.+ -+ ....+.|
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~G 95 (292)
T 2vc6_A 23 LHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVE----ITIKTANG---RVPVIAGAGSNSTAEAIAFVRHAQNAG 95 (292)
T ss_dssp HHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHHcC
Confidence 345556678899999998777664 699988777543 33444443 4789999887654 23 4446789
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 96 adavlv 101 (292)
T 2vc6_A 96 ADGVLI 101 (292)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997743
No 82
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=85.76 E-value=3 Score=38.68 Aligned_cols=69 Identities=14% Similarity=0.232 Sum_probs=45.9
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCCCE
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGVDV 303 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~d~ 303 (386)
..+.++.+.++|++.|.++|..+ .+.|..+.+++ +.+++..++.++-+|++-+... + ..+ .+.|++.
T Consensus 159 ~~~~~~~~~~~Ga~~i~l~DT~G-~~~P~~v~~lv--------~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~ 229 (307)
T 1ydo_A 159 VIRLSEALFEFGISELSLGDTIG-AANPAQVETVL--------EALLARFPANQIALHFHDTRGTALANMVTALQMGITV 229 (307)
T ss_dssp HHHHHHHHHHHTCSCEEEECSSC-CCCHHHHHHHH--------HHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCE
T ss_pred HHHHHHHHHhcCCCEEEEcCCCC-CcCHHHHHHHH--------HHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCE
Confidence 33444556778999999998766 57888776654 3444433346889999877652 2 333 4679998
Q ss_pred EE
Q 016596 304 VS 305 (386)
Q Consensus 304 l~ 305 (386)
++
T Consensus 230 vd 231 (307)
T 1ydo_A 230 FD 231 (307)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 83
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=85.70 E-value=15 Score=33.98 Aligned_cols=122 Identities=16% Similarity=0.211 Sum_probs=70.6
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||++.+++.- ++-.++.++...++|+|++
T Consensus 80 ~~v~~~~v~~~~grvpViaGvg~~~------------------------------------t~~ai~la~~A~~~Gadav 123 (315)
T 3na8_A 80 DEVVDFTLKTVAHRVPTIVSVSDLT------------------------------------TAKTVRRAQFAESLGAEAV 123 (315)
T ss_dssp HHHHHHHHHHHTTSSCBEEECCCSS------------------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCCC------------------------------------HHHHHHHHHHHHhcCCCEE
Confidence 3445556666677788887765441 1223455666778899999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHH-HhcCCCEEEc-CCCCCHH-
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERL-ALTGVDVVSL-DWTVDMA- 313 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l-~e~g~d~l~~-d~~~dl~- 313 (386)
.+.-|.-.-.|++ =+.-|++++.++. +.|++++.. |.. . .+..+ .+.+ +++.+ +...|+.
T Consensus 124 lv~~P~y~~~s~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~L~a~~p-nIvgiKdssgd~~~ 193 (315)
T 3na8_A 124 MVLPISYWKLNEA----EVFQHYRAVGEAI-----GVPVMLYNNPGTSGIDMSVELILRIVREVD-NVTMVKESTGDIQR 193 (315)
T ss_dssp EECCCCSSCCCHH----HHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHST-TEEEEEECSSCHHH
T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHhC-----CCcEEEEeCcchhCcCCCHHHHHHHHhcCC-CEEEEECCCCCHHH
Confidence 8876664444543 3455777777776 367777764 322 2 24445 5554 56655 3334544
Q ss_pred --HHHHHhCCCeeEEecCCc
Q 016596 314 --EGRRRLGPDVAVQGNVDP 331 (386)
Q Consensus 314 --e~~~~~g~~~~l~G~vd~ 331 (386)
++.+..+++..+..|-|.
T Consensus 194 ~~~~~~~~~~~f~v~~G~D~ 213 (315)
T 3na8_A 194 MHKLRLLGEGRVPFYNGCNP 213 (315)
T ss_dssp HHHHHHHTTTCSCEEECCGG
T ss_pred HHHHHHHcCCCEEEEeCchH
Confidence 344445555555555554
No 84
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=85.68 E-value=5.9 Score=38.42 Aligned_cols=139 Identities=9% Similarity=0.039 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEE
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVS 305 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~ 305 (386)
+--++.++.+.++|++.|=++-|. .||++|+- ++.+.+.+....+..++-.+..-++...+.|++.++
T Consensus 61 eeKl~Ia~~L~~~Gv~~IEvG~P~---asp~d~~~---------~~~i~~~~~~~~v~~~~r~~~~di~~A~~aG~~~V~ 128 (423)
T 3ivs_A 61 EKKIQIAKALDNFGVDYIELTSPV---ASEQSRQD---------CEAICKLGLKCKILTHIRCHMDDARVAVETGVDGVD 128 (423)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCTT---SCHHHHHH---------HHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEeecc---cCHHHHHH---------HHHHHhcCCCCEEEEeeccChhhHHHHHHcCCCEEE
Confidence 344566777889999998765433 56776643 223333321223333433333336777889998776
Q ss_pred cCC-----------CCCH----H------HHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCC
Q 016596 306 LDW-----------TVDM----A------EGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHG 364 (386)
Q Consensus 306 ~d~-----------~~dl----~------e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~ 364 (386)
+-. ..+. + +..+..|.+ +.+... .....+++.+.+-++.+.+.+.. . ++....
T Consensus 129 i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~--V~~~~e-da~r~d~~~~~~v~~~~~~~Ga~-~--i~l~DT 202 (423)
T 3ivs_A 129 VVIGTSQYLRKYSHGKDMTYIIDSATEVINFVKSKGIE--VRFSSE-DSFRSDLVDLLSLYKAVDKIGVN-R--VGIADT 202 (423)
T ss_dssp EEEEC-------------CHHHHHHHHHHHHHHTTTCE--EEEEEE-SGGGSCHHHHHHHHHHHHHHCCS-E--EEEEET
T ss_pred EEeeccHHHHHHHcCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEc-cCcCCCHHHHHHHHHHHHHhCCC-c--cccCCc
Confidence 521 1122 1 112223433 222221 12367888888888777765423 2 333333
Q ss_pred CCCCCcHHHHHHHHHHHHh
Q 016596 365 IKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 365 i~~~tp~Eni~a~~~a~~~ 383 (386)
+- -..|+.+..+++++++
T Consensus 203 vG-~~~P~~v~~lv~~l~~ 220 (423)
T 3ivs_A 203 VG-CATPRQVYDLIRTLRG 220 (423)
T ss_dssp TS-CCCHHHHHHHHHHHHH
T ss_pred cC-cCCHHHHHHHHHHHHh
Confidence 32 3345568888887765
No 85
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=85.61 E-value=10 Score=36.24 Aligned_cols=140 Identities=11% Similarity=0.047 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEE
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVV 304 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l 304 (386)
++-.+++++.+.++|++.|=+.-+ -.+|++|+ .++.+.+.+....+..+.-++..-++...+.|++.+
T Consensus 24 ~~~k~~ia~~L~~~Gv~~IE~g~p---~~~~~~~~---------~~~~i~~~~~~~~v~~~~r~~~~di~~a~~~g~~~v 91 (382)
T 2ztj_A 24 TQDKVEIAKALDEFGIEYIEVTTP---VASPQSRK---------DAEVLASLGLKAKVVTHIQCRLDAAKVAVETGVQGI 91 (382)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCT---TSCHHHHH---------HHHHHHTSCCSSEEEEEEESCHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHHcCcCEEEEcCC---cCCHHHHH---------HHHHHHhcCCCcEEEEEcccChhhHHHHHHcCCCEE
Confidence 455667778888899998766432 35676653 234444433233444443333334677788999987
Q ss_pred EcCCC----------CCHH----------HHHHHhCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCC
Q 016596 305 SLDWT----------VDMA----------EGRRRLGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGH 363 (386)
Q Consensus 305 ~~d~~----------~dl~----------e~~~~~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc 363 (386)
++-.. .+.+ +..+..|+.+-+. ++...- .-+++.+.+.++++.+. .. .+.|. .
T Consensus 92 ~i~~~~s~~~~~~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~--~~~ed~~~~~~~~~~~~~~~~~~~-a~-~i~l~--D 165 (382)
T 2ztj_A 92 DLLFGTSKYLRAPHGRDIPRIIEEAKEVIAYIREAAPHVEVR--FSAEDTFRSEEQDLLAVYEAVAPY-VD-RVGLA--D 165 (382)
T ss_dssp EEEECC--------CCCHHHHHHHHHHHHHHHHHHCTTSEEE--EEETTTTTSCHHHHHHHHHHHGGG-CS-EEEEE--E
T ss_pred EEEeccCHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCCEEEE--EEEEeCCCCCHHHHHHHHHHHHHh-cC-EEEec--C
Confidence 65211 1221 1222345222332 223332 67788888888887776 43 33332 2
Q ss_pred CCCCCCcHHHHHHHHHHHHh
Q 016596 364 GIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 364 ~i~~~tp~Eni~a~~~a~~~ 383 (386)
.+ .-..|+.+..+++++++
T Consensus 166 T~-G~~~P~~~~~lv~~l~~ 184 (382)
T 2ztj_A 166 TV-GVATPRQVYALVREVRR 184 (382)
T ss_dssp TT-SCCCHHHHHHHHHHHHH
T ss_pred CC-CCCCHHHHHHHHHHHHH
Confidence 22 22346667777777765
No 86
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=85.57 E-value=5.5 Score=37.27 Aligned_cols=70 Identities=11% Similarity=0.065 Sum_probs=48.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|+++|++..+.+. .+|.+..++++. .+++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 59 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~----~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~Gad 131 (332)
T 2r8w_A 59 ALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIE----AAATILRG---RRTLMAGIGALRTDEAVALAKDAEAAGAD 131 (332)
T ss_dssp HHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEEECCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 3444567789999998887764 699988877654 33444443 4799999887654 23 444568999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 132 avlv 135 (332)
T 2r8w_A 132 ALLL 135 (332)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7754
No 87
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=85.57 E-value=12 Score=34.34 Aligned_cols=121 Identities=18% Similarity=0.232 Sum_probs=70.5
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||+..+++.- ++-.++.++...++|+|++
T Consensus 71 ~~v~~~~~~~~~grvpviaGvg~~~------------------------------------t~~ai~la~~a~~~Gadav 114 (304)
T 3l21_A 71 IELLRAVLEAVGDRARVIAGAGTYD------------------------------------TAHSIRLAKACAAEGAHGL 114 (304)
T ss_dssp HHHHHHHHHHHTTTSEEEEECCCSC------------------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEEeCCCCC------------------------------------HHHHHHHHHHHHHcCCCEE
Confidence 3445566677777899988775441 1223455666778899999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHHH
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAEG 315 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e~ 315 (386)
.+.-|.-.-.|++ =+.-|++++.++. +.|++++.. |.. . .+..+.+.+ +++.+ +...|+...
T Consensus 115 lv~~P~y~~~s~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdssgd~~~~ 184 (304)
T 3l21_A 115 LVVTPYYSKPPQR----GLQAHFTAVADAT-----ELPMLLYDIPGRSAVPIEPDTIRALASHP-NIVGVXDAKADLHSG 184 (304)
T ss_dssp EEECCCSSCCCHH----HHHHHHHHHHTSC-----SSCEEEEECHHHHSSCCCHHHHHHHHTST-TEEEEEECSCCHHHH
T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHhcCC-CEEEEECCCCCHHHH
Confidence 9877764444543 3444677777766 468888764 432 2 245555554 56665 344566655
Q ss_pred HHHh-CCCeeEEecCC
Q 016596 316 RRRL-GPDVAVQGNVD 330 (386)
Q Consensus 316 ~~~~-g~~~~l~G~vd 330 (386)
.+.. +++..+..|-|
T Consensus 185 ~~~~~~~~f~v~~G~d 200 (304)
T 3l21_A 185 AQIMADTGLAYYSGDD 200 (304)
T ss_dssp HHHHHHHCCEEEESSG
T ss_pred HHHhcCCCeEEEeCch
Confidence 5432 22344444444
No 88
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=85.48 E-value=4.7 Score=37.00 Aligned_cols=71 Identities=17% Similarity=0.113 Sum_probs=48.8
Q ss_pred HHHHHHHHH-hCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 229 AKYVQYQAD-NGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 229 ~~~~~~~~e-~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
.++++.+++ .|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|
T Consensus 27 ~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~G 99 (293)
T 1f6k_A 27 RQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFR----IAKDEAKD---QIALIAQVGSVNLKEAVELGKYATELG 99 (293)
T ss_dssp HHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHH----HHHHHhCC---CCeEEEecCCCCHHHHHHHHHHHHhcC
Confidence 344556778 99999998877764 699988777653 34444543 4799999887654 23 4445689
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 100 adavlv 105 (293)
T 1f6k_A 100 YDCLSA 105 (293)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997743
No 89
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=85.44 E-value=18 Score=31.70 Aligned_cols=82 Identities=17% Similarity=0.236 Sum_probs=52.7
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEEEc
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVVSL 306 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l~~ 306 (386)
+.++.+.++|++.+.+.|..+.+- -.+...+++..+++.. +.|+++| |... .++.+.+.|+|.+.+
T Consensus 34 ~~a~~~~~~Gad~i~v~d~~~~~~--------~~~~~~~~i~~i~~~~-~ipvi~~--ggI~~~~~~~~~~~~Gad~V~l 102 (253)
T 1thf_D 34 ELGKFYSEIGIDELVFLDITASVE--------KRKTMLELVEKVAEQI-DIPFTVG--GGIHDFETASELILRGADKVSI 102 (253)
T ss_dssp HHHHHHHHTTCCEEEEEESSCSSS--------HHHHHHHHHHHHHTTC-CSCEEEE--SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEECCchhhc--------CCcccHHHHHHHHHhC-CCCEEEe--CCCCCHHHHHHHHHcCCCEEEE
Confidence 344667789999999887554332 1234445556666543 5787665 3332 478888899999887
Q ss_pred CCC----C-CHHHHHHHhCCC
Q 016596 307 DWT----V-DMAEGRRRLGPD 322 (386)
Q Consensus 307 d~~----~-dl~e~~~~~g~~ 322 (386)
... . .+.++.+.+|.+
T Consensus 103 g~~~l~~p~~~~~~~~~~g~~ 123 (253)
T 1thf_D 103 NTAAVENPSLITQIAQTFGSQ 123 (253)
T ss_dssp SHHHHHCTHHHHHHHHHHCGG
T ss_pred ChHHHhChHHHHHHHHHcCCC
Confidence 542 2 267788888753
No 90
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=85.13 E-value=9.4 Score=34.86 Aligned_cols=71 Identities=14% Similarity=0.249 Sum_probs=48.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++.+. ..++.+.. .+|++.|+.++.+ -+ ....+.|+
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~Ga 97 (291)
T 3tak_A 25 EKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIK----EIIRVANK---RIPIIAGTGANSTREAIELTKAAKDLGA 97 (291)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHH----HHHHHhCC---CCeEEEeCCCCCHHHHHHHHHHHHhcCC
Confidence 34455677899999998877764 689888766543 34444443 4799999887654 23 45567899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 98 davlv 102 (291)
T 3tak_A 98 DAALL 102 (291)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 97743
No 91
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=85.12 E-value=9.5 Score=34.98 Aligned_cols=71 Identities=13% Similarity=0.211 Sum_probs=48.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.|+.++.+ -+ ....+.|+
T Consensus 31 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~Ga 103 (297)
T 3flu_A 31 RDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIE----AVVKHVAK---RVPVIAGTGANNTVEAIALSQAAEKAGA 103 (297)
T ss_dssp HHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHHcCC
Confidence 34445577899999998877764 799888777654 34445543 4799999877654 23 45567899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 104 davlv 108 (297)
T 3flu_A 104 DYTLS 108 (297)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98743
No 92
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=85.05 E-value=23 Score=32.43 Aligned_cols=155 Identities=14% Similarity=0.164 Sum_probs=89.8
Q ss_pred HHHHHHHHHHhCC-ceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCE
Q 016596 164 GKALTILREEVNN-EAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQA 242 (386)
Q Consensus 164 ~ea~~~l~~~~g~-~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~ 242 (386)
.+.++...+..++ ++||+..+++.- ++-.++.++...++|+|+
T Consensus 63 ~~v~~~~~~~~~g~rvpviaGvg~~~------------------------------------t~~ai~la~~a~~~Gada 106 (301)
T 3m5v_A 63 RTCIEIAVETCKGTKVKVLAGAGSNA------------------------------------THEAVGLAKFAKEHGADG 106 (301)
T ss_dssp HHHHHHHHHHHTTSSCEEEEECCCSS------------------------------------HHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCC------------------------------------HHHHHHHHHHHHHcCCCE
Confidence 3455566677777 799988776531 222345666677899999
Q ss_pred EEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHH
Q 016596 243 VQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAE 314 (386)
Q Consensus 243 i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e 314 (386)
+.+.-|.-.-.|+ +=+.-|++++.++. +.|++++.. |.. . .+..+.+.-.+++.+ +...|+..
T Consensus 107 vlv~~P~y~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~~pnivgiKdssgd~~~ 177 (301)
T 3m5v_A 107 ILSVAPYYNKPTQ----QGLYEHYKAIAQSV-----DIPVLLYNVPGRTGCEISTDTIIKLFRDCENIYGVKEASGNIDK 177 (301)
T ss_dssp EEEECCCSSCCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHHHHHCTTEEEEEECSSCHHH
T ss_pred EEEcCCCCCCCCH----HHHHHHHHHHHHhC-----CCCEEEEeCchhhCcCCCHHHHHHHHhcCCCEEEEEeCCCCHHH
Confidence 9987776544454 33455788888877 468888764 332 2 245555652366666 44456655
Q ss_pred HHH---HhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 315 GRR---RLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 315 ~~~---~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
..+ .. ++..+..|-|... ...+. .|+.|.|-+.++- -|+-+.+|+++++
T Consensus 178 ~~~~~~~~-~~f~v~~G~d~~~------------~~~l~-~G~~G~is~~~n~-----~P~~~~~l~~a~~ 229 (301)
T 3m5v_A 178 CVDLLAHE-PRMMLISGEDAIN------------YPILS-NGGKGVISVTSNL-----LPDMISALTHFAL 229 (301)
T ss_dssp HHHHHHHC-TTSEEEECCGGGH------------HHHHH-TTCCEEEESGGGT-----CHHHHHHHHHHHH
T ss_pred HHHHHHhC-CCeEEEEccHHHH------------HHHHH-cCCCEEEehHHHh-----hHHHHHHHHHHHH
Confidence 444 34 3444444444321 11222 2445677655543 3556666666654
No 93
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=84.98 E-value=5.7 Score=37.83 Aligned_cols=85 Identities=20% Similarity=0.177 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCC---CcEEEEecCCcch-H-HHH--Hh
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD---LSLILYASGSGGL-L-ERL--AL 298 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~---~~~~~H~cG~~~~-l-~~l--~e 298 (386)
++..+.++++.++|++.|.++|+.+ ...|..+.+++ +.+++..++ .++-+|++.+... + ..+ .+
T Consensus 157 ~~~~~~~~~~~~~Ga~~i~l~DT~G-~~~P~~~~~lv--------~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~ 227 (370)
T 3rmj_A 157 DFLAEICGAVIEAGATTINIPDTVG-YSIPYKTEEFF--------RELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALK 227 (370)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECSSS-CCCHHHHHHHH--------HHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEecCccC-CcCHHHHHHHH--------HHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHH
Confidence 4556666777888999999988876 57788776654 333332222 6788999988753 3 334 46
Q ss_pred cCCCEEEc-----CC---CCCHHHHHHHh
Q 016596 299 TGVDVVSL-----DW---TVDMAEGRRRL 319 (386)
Q Consensus 299 ~g~d~l~~-----d~---~~dl~e~~~~~ 319 (386)
.|++.++. .+ ..+++++.-.+
T Consensus 228 aGa~~vd~tv~GlGeraGN~~lE~vv~~L 256 (370)
T 3rmj_A 228 GGARQVECTVNGLGERAGNASVEEIVMAL 256 (370)
T ss_dssp TTCCEEEEBGGGCSSTTCBCBHHHHHHHH
T ss_pred hCCCEEEEeccccCcccccccHHHHHHHH
Confidence 79998853 22 25676665443
No 94
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=84.95 E-value=4.7 Score=36.91 Aligned_cols=67 Identities=21% Similarity=0.200 Sum_probs=43.4
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-H--HHHhcCCCEEEc
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-E--RLALTGVDVVSL 306 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~--~l~e~g~d~l~~ 306 (386)
+++.+.+.|+|.|.++|+.+ .++|+.+.++ ++.+++..+++++.+|.+-+... . . .-.+.|++.++.
T Consensus 160 ~~~~~~~~G~d~i~l~Dt~G-~~~P~~~~~l--------v~~l~~~~~~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd~ 230 (295)
T 1ydn_A 160 VTEQLFSLGCHEVSLGDTIG-RGTPDTVAAM--------LDAVLAIAPAHSLAGHYHDTGGRALDNIRVSLEKGLRVFDA 230 (295)
T ss_dssp HHHHHHHHTCSEEEEEETTS-CCCHHHHHHH--------HHHHHTTSCGGGEEEEEBCTTSCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHhcCCCEEEecCCCC-CcCHHHHHHH--------HHHHHHhCCCCeEEEEECCCcchHHHHHHHHHHhCCCEEEe
Confidence 33445678999999998655 4788876664 34444433236789999766542 2 2 224679988764
No 95
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=84.85 E-value=1.8 Score=40.56 Aligned_cols=140 Identities=9% Similarity=0.067 Sum_probs=78.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHH----HHHhcC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLE----RLALTG 300 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~----~l~e~g 300 (386)
++-.+++++.+.++|.+.|=+.-+ ..||+.|+. .+++.+.+. +..+....-++..-++ .+...|
T Consensus 27 ~~~Kl~ia~~L~~~Gv~~IE~g~p---~~~~~d~e~-----v~~i~~~~~----~~~i~~l~r~~~~~i~~a~~al~~ag 94 (325)
T 3eeg_A 27 TEEKIIVAKALDELGVDVIEAGFP---VSSPGDFNS-----VVEITKAVT----RPTICALTRAKEADINIAGEALRFAK 94 (325)
T ss_dssp TTHHHHHHHHHHHHTCSEEEEECT---TSCHHHHHH-----HHHHHHHCC----SSEEEEECCSCHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCC---CCCHhHHHH-----HHHHHHhCC----CCEEEEeecCCHHHHHHHHHhhcccC
Confidence 455567788888999998876432 257877653 244444432 4444444434433344 344448
Q ss_pred CCEEEcCC-CC--------------------CHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEE
Q 016596 301 VDVVSLDW-TV--------------------DMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHIL 359 (386)
Q Consensus 301 ~d~l~~d~-~~--------------------dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Il 359 (386)
++.+.+.. .. +.-+..+..|.++. .|.- ..-..++|.+.+.++++.+.+ -.++
T Consensus 95 ~~~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~-f~~~--d~~~~~~~~~~~~~~~~~~~G---~~~i 168 (325)
T 3eeg_A 95 RSRIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVE-FFCE--DAGRADQAFLARMVEAVIEAG---ADVV 168 (325)
T ss_dssp SEEEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEE-EEEE--TGGGSCHHHHHHHHHHHHHHT---CSEE
T ss_pred CCEEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE-EEcc--ccccchHHHHHHHHHHHHhcC---CCEE
Confidence 88765421 10 11122333454433 3322 112578899998888887764 3456
Q ss_pred ecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 360 NLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 360 s~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
+....+-. ..|+.+..+++++++
T Consensus 169 ~l~DT~G~-~~P~~v~~lv~~l~~ 191 (325)
T 3eeg_A 169 NIPDTTGY-MLPWQYGERIKYLMD 191 (325)
T ss_dssp ECCBSSSC-CCHHHHHHHHHHHHH
T ss_pred EecCccCC-cCHHHHHHHHHHHHH
Confidence 66544443 455668888888775
No 96
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=84.36 E-value=4.1 Score=38.28 Aligned_cols=85 Identities=15% Similarity=0.150 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~ 301 (386)
+++.+.++.+.++|++.|.++|..+ .+.|....+++ +.+++..++.++-+|++-+... + ..+ .+.|+
T Consensus 169 ~~~~~~~~~~~~~Ga~~i~l~DT~G-~~~P~~v~~lv--------~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa 239 (337)
T 3ble_A 169 DYVKSLVEHLSKEHIERIFLPDTLG-VLSPEETFQGV--------DSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGV 239 (337)
T ss_dssp HHHHHHHHHHHTSCCSEEEEECTTC-CCCHHHHHHHH--------HHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCC-CcCHHHHHHHH--------HHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCC
Confidence 3445566677889999999988865 47787777654 3333332346889999887652 2 333 46799
Q ss_pred CEEEc-----CC---CCCHHHHHHHh
Q 016596 302 DVVSL-----DW---TVDMAEGRRRL 319 (386)
Q Consensus 302 d~l~~-----d~---~~dl~e~~~~~ 319 (386)
+.++. .. ..+++++.-.+
T Consensus 240 ~~vd~tv~GlG~~aGN~~~E~lv~~L 265 (337)
T 3ble_A 240 KGLHASINGLGERAGNTPLEALVTTI 265 (337)
T ss_dssp SEEEEBGGGCSSTTCBCBHHHHHHHH
T ss_pred CEEEEecccccccccchhHHHHHHHH
Confidence 98853 22 25676665444
No 97
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=84.06 E-value=3.3 Score=38.97 Aligned_cols=108 Identities=19% Similarity=0.285 Sum_probs=63.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEe
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYA 286 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~ 286 (386)
++.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++. =..+..++++++++.. +.|+.+-+
T Consensus 139 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslen-R~r~~~eiv~avr~~v-~~pv~vRl 216 (340)
T 3gr7_A 139 IEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPEN-RYRFLGEVIDAVREVW-DGPLFVRI 216 (340)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHH-HHHHHHHHHHHHHHhc-CCceEEEe
Confidence 444555555666677889999998864322 1444421 111 1235567777777664 56777766
Q ss_pred cCC-------c--c---hHHHHHhcCCCEEEcCCC------------CC---HHHHHHHhCCCeeEEecCC
Q 016596 287 SGS-------G--G---LLERLALTGVDVVSLDWT------------VD---MAEGRRRLGPDVAVQGNVD 330 (386)
Q Consensus 287 cG~-------~--~---~l~~l~e~g~d~l~~d~~------------~d---l~e~~~~~g~~~~l~G~vd 330 (386)
..+ . . +...+.+.|+|.+++... .+ ..++++.++-.+...|+|.
T Consensus 217 s~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~GgI~ 287 (340)
T 3gr7_A 217 SASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAVGLIT 287 (340)
T ss_dssp ESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEESSCC
T ss_pred ccccccCCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEeeCCCC
Confidence 532 1 1 246677889999987320 12 3567777765566667763
No 98
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=83.88 E-value=4.9 Score=39.53 Aligned_cols=110 Identities=24% Similarity=0.233 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGVD 302 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~d 302 (386)
+.++.++++.++|++.|.+.|..+. +.|....+++ ..+++.. +.++-+|++.+... + ..+ .+.|++
T Consensus 159 ~~~~~a~~l~~~Gad~I~l~DT~G~-~~P~~v~~lv--------~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~ 228 (464)
T 2nx9_A 159 TWVDVAQQLAELGVDSIALKDMAGI-LTPYAAEELV--------STLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVD 228 (464)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTSC-CCHHHHHHHH--------HHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHCCCCEEEEcCCCCC-cCHHHHHHHH--------HHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCC
Confidence 3445555667899999999887764 6677666543 4444433 46899999887652 2 333 478999
Q ss_pred EEEc--C---C---CCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHH
Q 016596 303 VVSL--D---W---TVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRK 351 (386)
Q Consensus 303 ~l~~--d---~---~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~ 351 (386)
.+.. . + ..+++++.-.+... ++++..=...-.++.+.+.++...
T Consensus 229 ~VD~ti~g~gertGN~~lE~lv~~L~~~-----g~~tgidl~~L~~is~~v~~~~~~ 280 (464)
T 2nx9_A 229 RVDTAISSMSGTYGHPATESLVATLQGT-----GYDTGLDIAKLEQIAAYFRDVRKK 280 (464)
T ss_dssp EEEEBCGGGCSTTSCCBHHHHHHHHTTS-----TTCCCCCHHHHHHHHHHHHHHHHH
T ss_pred EEEEeccccCCCCcCHHHHHHHHHHHhc-----CCCcccCHHHHHHHHHHHHHHHhh
Confidence 8853 1 1 25677666665431 344321012223455555555554
No 99
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=83.83 E-value=11 Score=34.26 Aligned_cols=85 Identities=15% Similarity=0.161 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++.+. ..++.+.. .+|++.++.++.+ -+ ....+.|
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~G 95 (289)
T 2yxg_A 23 LEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIE----KVVDVVNG---RVQVIAGAGSNCTEEAIELSVFAEDVG 95 (289)
T ss_dssp HHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhcC
Confidence 344555677899999998877764 699988777543 33444443 4799999887654 23 4445789
Q ss_pred CCEEEcC-C---CCCHHHHHHHh
Q 016596 301 VDVVSLD-W---TVDMAEGRRRL 319 (386)
Q Consensus 301 ~d~l~~d-~---~~dl~e~~~~~ 319 (386)
+|++.+- + ..+-+++.+.|
T Consensus 96 adavlv~~P~y~~~s~~~l~~~f 118 (289)
T 2yxg_A 96 ADAVLSITPYYNKPTQEGLRKHF 118 (289)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHH
T ss_pred CCEEEECCCCCCCCCHHHHHHHH
Confidence 9977432 1 24555444433
No 100
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=83.77 E-value=14 Score=34.18 Aligned_cols=71 Identities=17% Similarity=0.275 Sum_probs=48.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~Ga 107 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIA----TARKAVGP---DFPIMAGVGAHSTRQVLEHINDASVAGA 107 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHH----HHHHHHCT---TSCEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 34455677889999998877764 799888777553 33444432 5799999877654 23 44557899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 108 davlv 112 (318)
T 3qfe_A 108 NYVLV 112 (318)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 97743
No 101
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=83.67 E-value=14 Score=32.59 Aligned_cols=138 Identities=20% Similarity=0.196 Sum_probs=75.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEEEc
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVVSL 306 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l~~ 306 (386)
+.++.+.++|++.|.+.|..+.... .+..-+++..+++.. ++|+++ .|... .++.+.+.|+|.+.+
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~--------~~~~~~~i~~i~~~~-~iPvi~--~Ggi~~~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEE--------RAILLDVVARVAERV-FIPLTV--GGGVRSLEDARKLLLSGADKVSV 103 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTC--------HHHHHHHHHHHHTTC-CSCEEE--ESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEcCCccccC--------ccccHHHHHHHHHhC-CCCEEE--ECCcCCHHHHHHHHHcCCCEEEE
Confidence 5566778899999998886544322 223334455555543 567544 34432 367888899999887
Q ss_pred CCC----C-CHHHHHHHhCCCeeEEecCCcC------cc--CCCH----HHHHHHHHHHHHHcCCCCeEEec-C-CCCCC
Q 016596 307 DWT----V-DMAEGRRRLGPDVAVQGNVDPG------AL--FGSK----DFITNRINDTVRKAGRWKHILNL-G-HGIKV 367 (386)
Q Consensus 307 d~~----~-dl~e~~~~~g~~~~l~G~vd~~------~l--~gt~----eev~~~v~~~i~~~~~~g~Ils~-g-c~i~~ 367 (386)
... . .+.++.+.++....+. ++|.. .. .|-. .+..+.++++.+. +-+.+++.. + .+...
T Consensus 104 g~~~l~~p~~~~~~~~~~~~~~i~~-~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~-G~~~i~~~~~~~~g~~~ 181 (252)
T 1ka9_F 104 NSAAVRRPELIRELADHFGAQAVVL-AIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVEL-GAGEILLTSMDRDGTKE 181 (252)
T ss_dssp CHHHHHCTHHHHHHHHHHCGGGEEE-EEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHH-TCCEEEEEETTTTTTCS
T ss_pred ChHHHhCcHHHHHHHHHcCCCcEEE-EEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHc-CCCEEEEecccCCCCcC
Confidence 532 2 2677888887432222 24431 11 2211 1233444444443 333555542 2 12334
Q ss_pred CCcHHHHHHHHHH
Q 016596 368 GTPEENVAHFFEV 380 (386)
Q Consensus 368 ~tp~Eni~a~~~a 380 (386)
+...+.++.+.+.
T Consensus 182 g~~~~~i~~l~~~ 194 (252)
T 1ka9_F 182 GYDLRLTRMVAEA 194 (252)
T ss_dssp CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHH
Confidence 4567777766554
No 102
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=83.54 E-value=5 Score=37.10 Aligned_cols=83 Identities=16% Similarity=0.208 Sum_probs=54.4
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~----~~~~~~~g---rvpViaGvg~~st~~ai~la~~A~~~Gad 109 (306)
T 1o5k_A 37 RLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVS----RTLEIVDG---KIPVIVGAGTNSTEKTLKLVKQAEKLGAN 109 (306)
T ss_dssp HHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHH----HHHHHhCC---CCeEEEcCCCccHHHHHHHHHHHHhcCCC
Confidence 4455677899999998877764 699988777554 33444443 4789999887654 23 444578999
Q ss_pred EEEcC----CCCCHHHHHHHh
Q 016596 303 VVSLD----WTVDMAEGRRRL 319 (386)
Q Consensus 303 ~l~~d----~~~dl~e~~~~~ 319 (386)
++.+- +..+-+++.+.|
T Consensus 110 avlv~~P~y~~~s~~~l~~~f 130 (306)
T 1o5k_A 110 GVLVVTPYYNKPTQEGLYQHY 130 (306)
T ss_dssp EEEEECCCSSCCCHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHH
Confidence 77442 134556655544
No 103
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=83.52 E-value=15 Score=34.36 Aligned_cols=122 Identities=20% Similarity=0.292 Sum_probs=69.6
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++.+||+..+++.- ++-.++.++...++|+|++
T Consensus 87 ~~vi~~~ve~~~grvpViaGvg~~s------------------------------------t~eai~la~~A~~~Gadav 130 (343)
T 2v9d_A 87 KAIARFAIDHVDRRVPVLIGTGGTN------------------------------------ARETIELSQHAQQAGADGI 130 (343)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCSSC------------------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCCC------------------------------------HHHHHHHHHHHHhcCCCEE
Confidence 3445555666667788888776541 2223355566777899999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHH-hcCCCEEEc-CCCCCHHH
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLA-LTGVDVVSL-DWTVDMAE 314 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~-e~g~d~l~~-d~~~dl~e 314 (386)
.+.-|...-.|++ =+.-|++++.++. +.|++++.. |.. . .+..|. +.+ +++.+ +...|+..
T Consensus 131 lv~~P~Y~~~s~~----~l~~~f~~VA~a~-----~lPiilYn~P~~tg~~l~~e~~~~La~~~p-nIvgiKdssgd~~~ 200 (343)
T 2v9d_A 131 VVINPYYWKVSEA----NLIRYFEQVADSV-----TLPVMLYNFPALTGQDLTPALVKTLADSRS-NIIGIKDTIDSVAH 200 (343)
T ss_dssp EEECCSSSCCCHH----HHHHHHHHHHHTC-----SSCEEEEECHHHHSSCCCHHHHHHHHHHCT-TEEEEEECCSCHHH
T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEeCchhcCcCCCHHHHHHHHHhCC-CEEEEEeCCCCHHH
Confidence 8877764434543 3445667777655 468777764 432 2 244555 553 56655 33445544
Q ss_pred ---HHHHhC---CCeeEEecCCc
Q 016596 315 ---GRRRLG---PDVAVQGNVDP 331 (386)
Q Consensus 315 ---~~~~~g---~~~~l~G~vd~ 331 (386)
+.+..+ ++..+..|-|.
T Consensus 201 ~~~l~~~~~~~~~~f~v~~G~D~ 223 (343)
T 2v9d_A 201 LRSMIHTVKGAHPHFTVLCGYDD 223 (343)
T ss_dssp HHHHHHHHHHHCTTCEEEESSGG
T ss_pred HHHHHHhcCCCCCCEEEEECcHH
Confidence 344444 45666555553
No 104
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=83.42 E-value=8.6 Score=35.42 Aligned_cols=83 Identities=10% Similarity=0.043 Sum_probs=53.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.|+.++.+ -+ ....+.|+|
T Consensus 40 ~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~Gad 112 (304)
T 3l21_A 40 RLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLR----AVLEAVGD---RARVIAGAGTYDTAHSIRLAKACAAEGAH 112 (304)
T ss_dssp HHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---TSEEEEECCCSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHH----HHHHHhCC---CCeEEEeCCCCCHHHHHHHHHHHHHcCCC
Confidence 4445577899999998877764 789888777553 34444443 4799999866543 23 455678999
Q ss_pred EEEcC----CCCCHHHHHHHh
Q 016596 303 VVSLD----WTVDMAEGRRRL 319 (386)
Q Consensus 303 ~l~~d----~~~dl~e~~~~~ 319 (386)
++.+- ...+-+++.+.|
T Consensus 113 avlv~~P~y~~~s~~~l~~~f 133 (304)
T 3l21_A 113 GLLVVTPYYSKPPQRGLQAHF 133 (304)
T ss_dssp EEEEECCCSSCCCHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHH
Confidence 77442 124555554443
No 105
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=83.39 E-value=6.6 Score=37.22 Aligned_cols=108 Identities=11% Similarity=0.091 Sum_probs=63.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEe
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYA 286 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~ 286 (386)
++.+.+...+.++...++|.|+|-|.-.-+ .|+||.. ++.- ..+..++++++++..+.-++.+-+
T Consensus 156 I~~ii~~f~~AA~~A~~aGfDgVEih~a~GYLl~QFLsp~~N~RtD~yGGslenR-~rf~~evv~aVr~~vg~~~v~vRl 234 (361)
T 3gka_A 156 IPGVVAAFRRGAENARAAGFDGVEVHGANGYLLDQFLQDSANRRTDAYGGSIENR-ARLLLEVVDAAIDVWSAARVGVHL 234 (361)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHH-SHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhccCcccccccCCCCCChhhc-HHHHHHHHHHHHHHcCCCeEEEec
Confidence 334445555566667889999998865332 1444421 1111 234556666666543212677766
Q ss_pred cCCc------------c---hHHHHHhcCCCEEEcCCC----CCHHHHHHHhCCCeeEEecC
Q 016596 287 SGSG------------G---LLERLALTGVDVVSLDWT----VDMAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 287 cG~~------------~---~l~~l~e~g~d~l~~d~~----~dl~e~~~~~g~~~~l~G~v 329 (386)
.+.. . +...+.+.|+|.+++... .-..++|+.++.-++..|++
T Consensus 235 s~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi 296 (361)
T 3gka_A 235 APRGDAHTMGDSDPAATFGHVARELGRRRIAFLFARESFGGDAIGQQLKAAFGGPFIVNENF 296 (361)
T ss_dssp CTTCCSSSCCCSCHHHHHHHHHHHHHHTTCSEEEEECCCSTTCCHHHHHHHHCSCEEEESSC
T ss_pred ccccccCCCCCCCcHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHHHHcCCCEEEeCCC
Confidence 5421 1 235667789999987543 24678888887656666665
No 106
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=83.20 E-value=6.8 Score=37.16 Aligned_cols=108 Identities=10% Similarity=0.064 Sum_probs=62.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEe
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYA 286 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~ 286 (386)
++.+.+...+.++...++|.|+|-|.-.-+ .|+||.. ++.- ..+..++++++++..+.-++.+-+
T Consensus 148 I~~ii~~f~~AA~~a~~aGfDgVEih~a~GYLl~QFLSp~~N~RtD~yGGslenR-~rf~~eiv~aVr~~vg~~~v~vRl 226 (362)
T 4ab4_A 148 INDIVEAYRSGAENAKAAGFDGVEIHGANGYLLDQFLQSSTNQRTDRYGGSLENR-ARLLLEVTDAAIEVWGAQRVGVHL 226 (362)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHH-HHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCcCccHHHhhcCCccccccCCCCCchhhH-HHHHHHHHHHHHHhcCCCceEEEe
Confidence 334444455556667789999998864322 1444421 1111 335566666666643212677665
Q ss_pred cCCc------------c---hHHHHHhcCCCEEEcCCC----CCHHHHHHHhCCCeeEEecC
Q 016596 287 SGSG------------G---LLERLALTGVDVVSLDWT----VDMAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 287 cG~~------------~---~l~~l~e~g~d~l~~d~~----~dl~e~~~~~g~~~~l~G~v 329 (386)
.+.. . +...+.+.|+|.+++... .-..++|+.++.-++..|++
T Consensus 227 s~~~~~~g~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~~~~iPvi~~Ggi 288 (362)
T 4ab4_A 227 APRADAHDMGDADRAETFTYVARELGKRGIAFICSREREADDSIGPLIKEAFGGPYIVNERF 288 (362)
T ss_dssp CTTCCSSSCCCTTHHHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHHHCSCEEEESSC
T ss_pred eccccccccCCCCcHHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHHHCCCCEEEeCCC
Confidence 5431 1 135566789999987543 24678888887655666665
No 107
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=83.16 E-value=9.5 Score=35.34 Aligned_cols=70 Identities=17% Similarity=0.137 Sum_probs=45.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hH---HHHHhcCCCE
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LL---ERLALTGVDV 303 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l---~~l~e~g~d~ 303 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++..++. -+ ....+.|+|+
T Consensus 37 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~----~~v~~~~g---rvpViaGvg~~t~~ai~la~~A~~~Gada 109 (316)
T 3e96_A 37 ETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVR----RTVEYVHG---RALVVAGIGYATSTAIELGNAAKAAGADA 109 (316)
T ss_dssp HHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEEECSSHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHH----HHHHHhCC---CCcEEEEeCcCHHHHHHHHHHHHhcCCCE
Confidence 4444567899999998776664 799888777653 34455543 4799999854332 23 3445678887
Q ss_pred EEc
Q 016596 304 VSL 306 (386)
Q Consensus 304 l~~ 306 (386)
+.+
T Consensus 110 vlv 112 (316)
T 3e96_A 110 VMI 112 (316)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 108
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=83.11 E-value=10 Score=34.77 Aligned_cols=72 Identities=19% Similarity=0.187 Sum_probs=48.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++.+. ..++.+... .+|++.|+.++.+ -+ ....+.|+
T Consensus 31 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~g~--rvpviaGvg~~~t~~ai~la~~a~~~Ga 104 (301)
T 3m5v_A 31 ARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIE----IAVETCKGT--KVKVLAGAGSNATHEAVGLAKFAKEHGA 104 (301)
T ss_dssp HHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHH----HHHHHHTTS--SCEEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCCC--CCeEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 34455677899999998777764 789887776543 334444320 3799999877654 23 45567899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 105 davlv 109 (301)
T 3m5v_A 105 DGILS 109 (301)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98744
No 109
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=83.07 E-value=7.5 Score=34.24 Aligned_cols=126 Identities=13% Similarity=0.176 Sum_probs=71.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEE---
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVV--- 304 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l--- 304 (386)
.|++.+.++|+|.|.+..... +...+.++.++++ |....+=+..++. .++.+.+. +|.+
T Consensus 78 ~~i~~~~~aGad~itvH~Ea~-------------~~~~~~i~~i~~~--G~k~gval~p~t~~e~l~~~l~~-~D~Vl~m 141 (228)
T 3ovp_A 78 QWVKPMAVAGANQYTFHLEAT-------------ENPGALIKDIREN--GMKVGLAIKPGTSVEYLAPWANQ-IDMALVM 141 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGC-------------SCHHHHHHHHHHT--TCEEEEEECTTSCGGGTGGGGGG-CSEEEEE
T ss_pred HHHHHHHHcCCCEEEEccCCc-------------hhHHHHHHHHHHc--CCCEEEEEcCCCCHHHHHHHhcc-CCeEEEe
Confidence 466778889999998853221 1246778888887 4555555554443 34444432 4543
Q ss_pred EcCCC--------CC---HHHHHHHhCC-CeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHH
Q 016596 305 SLDWT--------VD---MAEGRRRLGP-DVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEE 372 (386)
Q Consensus 305 ~~d~~--------~d---l~e~~~~~g~-~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~E 372 (386)
+++.. .. ++++++..++ .+.+-|||++ +.++++++.+.+ .+|.+++- +-.+-|.+
T Consensus 142 sv~pGf~Gq~f~~~~l~ki~~lr~~~~~~~I~VdGGI~~-----------~t~~~~~~aGAd-~~VvGsaI-f~a~dp~~ 208 (228)
T 3ovp_A 142 TVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDGGVGP-----------DTVHKCAEAGAN-MIVSGSAI-MRSEDPRS 208 (228)
T ss_dssp SSCTTTCSCCCCGGGHHHHHHHHHHCTTCEEEEESSCST-----------TTHHHHHHHTCC-EEEESHHH-HTCSCHHH
T ss_pred eecCCCCCcccCHHHHHHHHHHHHhcCCCCEEEeCCcCH-----------HHHHHHHHcCCC-EEEEeHHH-hCCCCHHH
Confidence 22211 12 5666666543 3778999976 233444454433 56665431 11234678
Q ss_pred HHHHHHHHHHhh
Q 016596 373 NVAHFFEVAKAI 384 (386)
Q Consensus 373 ni~a~~~a~~~y 384 (386)
+++.+.+.++++
T Consensus 209 ~~~~l~~~~~~~ 220 (228)
T 3ovp_A 209 VINLLRNVCSEA 220 (228)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888877765
No 110
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=82.85 E-value=10 Score=36.00 Aligned_cols=95 Identities=17% Similarity=0.190 Sum_probs=59.9
Q ss_pred HHHHHHHHHHhhCCCCcEEEEec-CCc--chHHHHHhcCCC----EE-EcCCCCCHHHHHHHh---CCCeeEEecCCcCc
Q 016596 265 YLKQIVDTVKQTHPDLSLILYAS-GSG--GLLERLALTGVD----VV-SLDWTVDMAEGRRRL---GPDVAVQGNVDPGA 333 (386)
Q Consensus 265 ~~k~l~~~i~~~~~~~~~~~H~c-G~~--~~l~~l~e~g~d----~l-~~d~~~dl~e~~~~~---g~~~~l~G~vd~~~ 333 (386)
.++..++..++. |.|+++|+- |.. ..++.+.+.|++ ++ +.+...|+..+++.+ |-.+.+-|.+ .
T Consensus 170 ~f~aq~~~A~e~--glPViiH~r~gr~a~d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~l~~~G~yI~f~g~~---~ 244 (363)
T 3ovg_A 170 ALEVAARTSILT--GCPILVHTQLGTMALEVAKHLIGFGANPDKIQISHLNKNPDKYYYEKVIKETGVTLCFDGPD---R 244 (363)
T ss_dssp HHHHHHHHHHHH--CCCEEEEEETTCSHHHHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHHHHHHCCEEEECCTT---C
T ss_pred HHHHHHHHHHHh--CCEEEEeCCCCCCHHHHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHHHHHCCcEEEECCee---c
Confidence 344556666665 689999974 211 246777777765 23 445446787777655 7656565532 1
Q ss_pred c-CCCHHHHHHHHHHHHHHcCCCCeEEecCCC
Q 016596 334 L-FGSKDFITNRINDTVRKAGRWKHILNLGHG 364 (386)
Q Consensus 334 l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~ 364 (386)
. +.+.++-.+.++++++.+....++|+++|.
T Consensus 245 ~~~~~~~~ra~~l~~lv~~~p~drILleTDap 276 (363)
T 3ovg_A 245 VKYYPDSLLAENIKYLVDKGLQKHITLSLDAG 276 (363)
T ss_dssp TTTCCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred cccCChhHHHHHHHHHHHhcCCCeEEEeCCCC
Confidence 2 224455566778888776656899999986
No 111
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=82.85 E-value=12 Score=34.67 Aligned_cols=70 Identities=20% Similarity=0.279 Sum_probs=48.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 48 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~v~~~~g---rvpViaGvg~~st~eai~la~~A~~~Gad 120 (314)
T 3qze_A 48 KLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIR----RVVDQVKG---RIPVIAGTGANSTREAVALTEAAKSGGAD 120 (314)
T ss_dssp HHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHHcCCC
Confidence 3344567799999998877764 799988877654 33444543 4799998877654 23 455678999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 121 avlv 124 (314)
T 3qze_A 121 ACLL 124 (314)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8744
No 112
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=82.66 E-value=20 Score=32.56 Aligned_cols=93 Identities=13% Similarity=0.270 Sum_probs=52.6
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~ 301 (386)
++.++...++|+|++.+.-|.-.-.|++. +.-|++++.++. +.|++++.. |.. . .+..+.+.+
T Consensus 86 i~la~~a~~~Gadavlv~~P~y~~~s~~~----l~~~f~~ia~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p- 155 (291)
T 3a5f_A 86 IAMSKWAESIGVDGLLVITPYYNKTTQKG----LVKHFKAVSDAV-----STPIIIYNVPGRTGLNITPGTLKELCEDK- 155 (291)
T ss_dssp HHHHHHHHHTTCSEEEEECCCSSCCCHHH----HHHHC-CTGGGC-----CSCEEEEECHHHHSCCCCHHHHHHHTTST-
T ss_pred HHHHHHHHhcCCCEEEEcCCCCCCCCHHH----HHHHHHHHHHhc-----CCCEEEEeCccccCCCCCHHHHHHHHcCC-
Confidence 55666777899999998777644445433 334555665544 468888764 322 2 234455543
Q ss_pred CEEEc-CCCCCHHHH---HHHhCCCeeEEecCCc
Q 016596 302 DVVSL-DWTVDMAEG---RRRLGPDVAVQGNVDP 331 (386)
Q Consensus 302 d~l~~-d~~~dl~e~---~~~~g~~~~l~G~vd~ 331 (386)
+++.+ +...|+... ++..+++..+..|-|.
T Consensus 156 nivgiK~s~gd~~~~~~~~~~~~~~f~v~~G~d~ 189 (291)
T 3a5f_A 156 NIVAVXEASGNISQIAQIKALCGDKLDIYSGNDD 189 (291)
T ss_dssp TEEEEEECSCCHHHHHHHHHHHGGGSEEEESCGG
T ss_pred CEEEEeCCCCCHHHHHHHHHhcCCCeEEEeCcHH
Confidence 56665 444566544 4445545555554443
No 113
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=82.55 E-value=31 Score=32.02 Aligned_cols=126 Identities=12% Similarity=0.129 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhC--CCEEEEec-CCcCCCCH----HHHHHhhHHHHHHHHHHHHhhC--CCCcEEEEecC-
Q 016596 219 ALLRKFTTSMAKYVQYQADNG--AQAVQIFD-SWATELSP----VDFEEFSLPYLKQIVDTVKQTH--PDLSLILYASG- 288 (386)
Q Consensus 219 ~ll~~~~~~~~~~~~~~~e~G--~d~i~i~d-~~~~~iSp----~~f~ef~~P~~k~l~~~i~~~~--~~~~~~~H~cG- 288 (386)
++.+.+.++..+.++.+.+.| ++.+.+.- ...+++.| ..++ -...++++.++.+++.. ++.++++|...
T Consensus 104 ~~~~~~~~yt~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~-~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~ 182 (332)
T 1hjs_A 104 NLSWKLYNYTLDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWA-NIARLLHSAAWGIKDSSLSPKPKIMIHLDNG 182 (332)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHH-HHHHHHHHHHHHHHTSCCSSCCEEEEEESCT
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHH-HHHHHHHHHHHHHHHhccCCCCeEEEEeCCc
Confidence 344455555555566677666 45555542 22223311 1222 33457777888888875 56678999873
Q ss_pred -Ccc----hHHHHHhcC------CCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCe
Q 016596 289 -SGG----LLERLALTG------VDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKH 357 (386)
Q Consensus 289 -~~~----~l~~l~e~g------~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~ 357 (386)
+.. +++.+.+.| +|++++....- +. . .++.+.+++.++++-+..++.-+
T Consensus 183 ~~~~~~~~~~d~~~~~g~~~~~~~DvIG~syYp~-------w~----------~---~~~~~~l~~~l~~~~~rygKpv~ 242 (332)
T 1hjs_A 183 WDWGTQNWWYTNVLKQGTLELSDFDMMGVSFYPF-------YS----------S---SATLSALKSSLDNMAKTWNKEIA 242 (332)
T ss_dssp TCHHHHHHHHHHHHTTSSSCGGGCCEEEEECCSS-------SC----------T---TCCHHHHHHHHHHHHHHHCCEEE
T ss_pred cchHHHHHHHHHHHhcCCCCCCCcCEEEEecCcc-------cC----------C---CCCHHHHHHHHHHHHHHHCCCEE
Confidence 221 247676555 67887765431 00 0 14677888887877777655566
Q ss_pred EEecCCCC
Q 016596 358 ILNLGHGI 365 (386)
Q Consensus 358 Ils~gc~i 365 (386)
|.-+||..
T Consensus 243 v~EtG~~~ 250 (332)
T 1hjs_A 243 VVETNWPI 250 (332)
T ss_dssp EEECCCCS
T ss_pred EEEccCcc
Confidence 77677643
No 114
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=82.42 E-value=14 Score=34.27 Aligned_cols=112 Identities=13% Similarity=0.165 Sum_probs=60.7
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcc-hHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGG-LLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~-~l~~l~e~g~d~l~~d 307 (386)
..+++..+.+..+|.- +|+....-...+++..++..+.+.+.++|+.+|.+ |... .+...++.|+..+.+|
T Consensus 33 Ail~AAee~~sPvIlq-------~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVMiD 105 (323)
T 2isw_A 33 GIMKAVVQLKSPVILQ-------CSRGALKYSDMIYLKKLCEAALEKHPDIPICIHLDHGDTLESVKMAIDLGFSSVMID 105 (323)
T ss_dssp HHHHHHHHTTCCEEEE-------EEHHHHHHTTTHHHHHHHHHHHHHCTTSCEEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhCCCEEEE-------CChhHHHhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHcCCCeEEec
Confidence 3344555677777653 33332221223455556655555423689999986 4332 4677788999999887
Q ss_pred CC-C----CHHHHHHHhC----CCeeE------EecCC----cCccCCCHHHHHHHHHHH
Q 016596 308 WT-V----DMAEGRRRLG----PDVAV------QGNVD----PGALFGSKDFITNRINDT 348 (386)
Q Consensus 308 ~~-~----dl~e~~~~~g----~~~~l------~G~vd----~~~l~gt~eev~~~v~~~ 348 (386)
.. . +++..++... ..+++ .|+.. ...++-+|||+.+.+++.
T Consensus 106 gS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~v~~~~~yTdPeea~~Fv~~T 165 (323)
T 2isw_A 106 ASHHPFDENVRITKEVVAYAHARSVSVEAELGTLGGIEEDVQNTVQLTEPQDAKKFVELT 165 (323)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESCC----------CCCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeCCccCCccCcccccccCCHHHHHHHHHHH
Confidence 54 2 3333333221 11222 12221 222478899988888754
No 115
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=82.32 E-value=27 Score=32.20 Aligned_cols=122 Identities=15% Similarity=0.195 Sum_probs=65.0
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++.+||++.+++.- ++-.++.++...++|+|++
T Consensus 67 ~~v~~~~~~~~~grvpviaGvg~~~------------------------------------t~~ai~la~~a~~~Gadav 110 (318)
T 3qfe_A 67 AQLIATARKAVGPDFPIMAGVGAHS------------------------------------TRQVLEHINDASVAGANYV 110 (318)
T ss_dssp HHHHHHHHHHHCTTSCEEEECCCSS------------------------------------HHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEeCCCCC------------------------------------HHHHHHHHHHHHHcCCCEE
Confidence 3445556666677889988776541 1223344555667788888
Q ss_pred EEecCCc-C-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC-c-----c--hHHHHHh-cCCCEEEc-CCCCC
Q 016596 244 QIFDSWA-T-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS-G-----G--LLERLAL-TGVDVVSL-DWTVD 311 (386)
Q Consensus 244 ~i~d~~~-~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~-~-----~--~l~~l~e-~g~d~l~~-d~~~d 311 (386)
.+.-|.. . -.|+ +-+.-|++.+.++. +.|++++..-. + . .+..+.+ .+ +++.+ +...|
T Consensus 111 lv~~P~y~~kp~~~----~~l~~~f~~ia~a~-----~lPiilYn~P~~t~g~~l~~~~~~~La~~~p-nIvgiKdssgd 180 (318)
T 3qfe_A 111 LVLPPAYFGKATTP----PVIKSFFDDVSCQS-----PLPVVIYNFPGVCNGIDLDSDMITTIARKNP-NVVGVKLTCAS 180 (318)
T ss_dssp EECCCCC---CCCH----HHHHHHHHHHHHHC-----SSCEEEEECCC----CCCCHHHHHHHHHHCT-TEEEEEESSCC
T ss_pred EEeCCcccCCCCCH----HHHHHHHHHHHhhC-----CCCEEEEeCCcccCCCCCCHHHHHHHHhhCC-CEEEEEeCCCC
Confidence 8755532 1 1233 23444667777765 35777766522 1 1 1344454 44 56655 33456
Q ss_pred HHHH---HHHhC-CCeeEEecCCc
Q 016596 312 MAEG---RRRLG-PDVAVQGNVDP 331 (386)
Q Consensus 312 l~e~---~~~~g-~~~~l~G~vd~ 331 (386)
+... .+.++ ++..+..|-|.
T Consensus 181 ~~~~~~~~~~~~~~~f~v~~G~d~ 204 (318)
T 3qfe_A 181 VGKITRLAATLPPAAFSVFGGQSD 204 (318)
T ss_dssp HHHHHHHHHHSCGGGCEEEESCGG
T ss_pred HHHHHHHHHhcCCCCEEEEEecHH
Confidence 5443 33343 34555555543
No 116
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=82.09 E-value=10 Score=35.09 Aligned_cols=70 Identities=16% Similarity=0.261 Sum_probs=48.0
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 47 ~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~v~~~~g---rvpViaGvg~~st~~ai~la~~A~~~Gad 119 (315)
T 3si9_A 47 NFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIE----LCVEQVAK---RVPVVAGAGSNSTSEAVELAKHAEKAGAD 119 (315)
T ss_dssp HHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHhcCCC
Confidence 4444577899999998777764 789888777553 34444443 4799998877654 23 455678999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 120 avlv 123 (315)
T 3si9_A 120 AVLV 123 (315)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8743
No 117
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=81.95 E-value=9.3 Score=36.97 Aligned_cols=121 Identities=10% Similarity=0.143 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH------H--------HHhhHHHHHHHHHHHHhh-CCCCc
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD------F--------EEFSLPYLKQIVDTVKQT-HPDLS 281 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~------f--------~ef~~P~~k~l~~~i~~~-~~~~~ 281 (386)
++.+.+...+.++...++|.|+|-|.-.-+ .|+||.. | -+|...-.+.+.+++.+. +++.+
T Consensus 165 I~~ii~~F~~AA~rA~~AGfDgVEIH~ahGYLl~QFlSp~~N~RtD~yGGs~lenR~Rf~~evv~aVr~~v~~~~~~~f~ 244 (419)
T 3l5a_A 165 INSIIQQYRDATLRAIKAGFDGVEISIAQRLLIQTFFSTFSNRRTDHYGADSLKNRARLCLEVMRAVQEVIDKEAPDNFI 244 (419)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSTTCHHHHHHHHHHHHHHHHHHHHHHCCTTCE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHccCCcccccccCCCCchhhhhhHHHHHHHHHHHHHHhhhcCCCee
Confidence 444445555566667889999998865322 1455521 1 144444444444444221 23456
Q ss_pred EEEEecC---------Cc----c-hHHHHHh-cCCCEEEcCCC-----------------CC-HHHHHHHhCCCeeE--E
Q 016596 282 LILYASG---------SG----G-LLERLAL-TGVDVVSLDWT-----------------VD-MAEGRRRLGPDVAV--Q 326 (386)
Q Consensus 282 ~~~H~cG---------~~----~-~l~~l~e-~g~d~l~~d~~-----------------~d-l~e~~~~~g~~~~l--~ 326 (386)
+.+-+.. .. . +...+.+ .|+|.|++... .+ .+.+|+.+++++.+ .
T Consensus 245 v~vRis~~~~~~~~~G~~~ed~~~la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~~~iPVI~~ 324 (419)
T 3l5a_A 245 LGFRATPEETRGSDLGYTIDEFNQLIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLAGRIPLIAS 324 (419)
T ss_dssp EEEEECSCEEETTEEEECHHHHHHHHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHTTSSCEEEC
T ss_pred EEEecccccccCCCCCCCHHHHHHHHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcCCCCeEEEE
Confidence 7665543 11 1 2466778 89999876321 01 35677778654444 4
Q ss_pred ecCCcCccCCCHHHHHHHHHH
Q 016596 327 GNVDPGALFGSKDFITNRIND 347 (386)
Q Consensus 327 G~vd~~~l~gt~eev~~~v~~ 347 (386)
|+| .|+|+..+.+.+
T Consensus 325 GgI------~t~e~Ae~~L~~ 339 (419)
T 3l5a_A 325 GGI------NSPESALDALQH 339 (419)
T ss_dssp SSC------CSHHHHHHHGGG
T ss_pred CCC------CCHHHHHHHHHh
Confidence 554 345555554444
No 118
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=81.84 E-value=12 Score=34.03 Aligned_cols=94 Identities=18% Similarity=0.173 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCC-CCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC----CcchHHHHHhcC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATE-LSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG----SGGLLERLALTG 300 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~-iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG----~~~~l~~l~e~g 300 (386)
+-.++.++...++|+|++.+.-|.-.- .|++ =+.-|++++.++. +.|++++..- ..--.+.+.++
T Consensus 78 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~L- 147 (288)
T 2nuw_A 78 NDVMELVKFSNEMDILGVSSHSPYYFPRLPEK----FLAKYYEEIARIS-----SHSLYIYNYPAATGYDIPPSILKSL- 147 (288)
T ss_dssp HHHHHHHHHHHTSCCSEEEECCCCSSCSCCHH----HHHHHHHHHHHHC-----CSCEEEEECHHHHSCCCCHHHHTTT-
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEECchHhCcCCCHHHHhcc-
Confidence 344566777778999999987776444 4543 3555777887765 4688887643 22125777777
Q ss_pred CCEEEc-CCCCCHHHHHHH--hCCCeeEEecCC
Q 016596 301 VDVVSL-DWTVDMAEGRRR--LGPDVAVQGNVD 330 (386)
Q Consensus 301 ~d~l~~-d~~~dl~e~~~~--~g~~~~l~G~vd 330 (386)
+++.+ +...|+....+. .+++..+..|-|
T Consensus 148 -nIvgiKdssgd~~~~~~~~~~~~~f~v~~G~d 179 (288)
T 2nuw_A 148 -PVKGIKDTNQDLAHSLEYKLNLPGVKVYNGSN 179 (288)
T ss_dssp -TEEEEEECCSCHHHHHHHHHHSTTCEEEECCG
T ss_pred -EEEEEEeCCCCHHHHHHHHhcCCCeEEEECcH
Confidence 66666 444566544332 466666555554
No 119
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=81.79 E-value=11 Score=34.84 Aligned_cols=70 Identities=19% Similarity=0.207 Sum_probs=48.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 49 ~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~----~~v~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~Gad 121 (315)
T 3na8_A 49 RSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVD----FTLKTVAH---RVPTIVSVSDLTTAKTVRRAQFAESLGAE 121 (315)
T ss_dssp HHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 4444567899999998877664 799888777554 34444443 4789999876654 23 455678999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 122 avlv 125 (315)
T 3na8_A 122 AVMV 125 (315)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 120
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=81.67 E-value=22 Score=32.72 Aligned_cols=71 Identities=15% Similarity=0.257 Sum_probs=48.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++.+. ..++.+.. .+|++.++.++.+ -+ ....+.|+
T Consensus 32 ~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~Ga 104 (309)
T 3fkr_A 32 KRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTR----TILEHVAG---RVPVIVTTSHYSTQVCAARSLRAQQLGA 104 (309)
T ss_dssp HHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCchHHHHHHHHHHHHHcCC
Confidence 34455677899999998877764 799988777554 33444432 5799999877654 23 45567899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 105 davlv 109 (309)
T 3fkr_A 105 AMVMA 109 (309)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98744
No 121
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=81.67 E-value=33 Score=31.99 Aligned_cols=145 Identities=11% Similarity=0.051 Sum_probs=79.5
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEe----cCCc----CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-cC--Ccch
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIF----DSWA----TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-SG--SGGL 292 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~----d~~~----~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-cG--~~~~ 292 (386)
-++..+++++++.++|++.|=++ -+.+ ++...+.|+ .++++.+ ..++.++.... -| +...
T Consensus 28 ~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e-----~l~~i~~----~~~~~~i~~l~~p~~~~~~~ 98 (345)
T 1nvm_A 28 TLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLE-----YIEAVAG----EISHAQIATLLLPGIGSVHD 98 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHH-----HHHHHHT----TCSSSEEEEEECBTTBCHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHH-----HHHHHHh----hCCCCEEEEEecCCcccHHH
Confidence 34556677788888999998764 1111 111122222 2333333 22345655552 22 2225
Q ss_pred HHHHHhcCCCEEEcCC-CC------CHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 293 LERLALTGVDVVSLDW-TV------DMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 293 l~~l~e~g~d~l~~d~-~~------dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
++...+.|++.+.+.. .. +..+..+..|- .+.+.+.. ...-++|.+.+.++++.+.+ -++++....+
T Consensus 99 i~~a~~aGvd~v~I~~~~s~~~~~~~~i~~ak~~G~--~v~~~~~~-a~~~~~e~~~~ia~~~~~~G---a~~i~l~DT~ 172 (345)
T 1nvm_A 99 LKNAYQAGARVVRVATHCTEADVSKQHIEYARNLGM--DTVGFLMM-SHMIPAEKLAEQGKLMESYG---ATCIYMADSG 172 (345)
T ss_dssp HHHHHHHTCCEEEEEEETTCGGGGHHHHHHHHHHTC--EEEEEEES-TTSSCHHHHHHHHHHHHHHT---CSEEEEECTT
T ss_pred HHHHHhCCcCEEEEEEeccHHHHHHHHHHHHHHCCC--EEEEEEEe-CCCCCHHHHHHHHHHHHHCC---CCEEEECCCc
Confidence 7888899999875522 11 22233344554 34444411 12567888888888777663 4456554333
Q ss_pred CCCCcHHHHHHHHHHHHhh
Q 016596 366 KVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 366 ~~~tp~Eni~a~~~a~~~y 384 (386)
-.. .|+.+..+++++++.
T Consensus 173 G~~-~P~~v~~lv~~l~~~ 190 (345)
T 1nvm_A 173 GAM-SMNDIRDRMRAFKAV 190 (345)
T ss_dssp CCC-CHHHHHHHHHHHHHH
T ss_pred Ccc-CHHHHHHHHHHHHHh
Confidence 333 477788888888763
No 122
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=81.65 E-value=32 Score=31.57 Aligned_cols=133 Identities=13% Similarity=0.116 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHh--cCCCE
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLAL--TGVDV 303 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e--~g~d~ 303 (386)
+..++.++.+++.|||.|-+.-. +..++++.--+-+.|.++.+-+.. ++|+.+-+- ++..++.-.+ .|.++
T Consensus 37 ~~a~~~A~~~v~~GAdiIDIg~g-~~~v~~~eem~rvv~~i~~~~~~~-----~vpisIDT~-~~~V~eaaL~~~~Ga~i 109 (300)
T 3k13_A 37 DEALSIARQQVEDGALVIDVNMD-DGLLDARTEMTTFLNLIMSEPEIA-----RVPVMIDSS-KWEVIEAGLKCLQGKSI 109 (300)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECC-CTTSCHHHHHHHHHHHHHTCHHHH-----TSCEEEECS-CHHHHHHHHHHCSSCCE
T ss_pred HHHHHHHHHHHHCCCCEEEECCC-CCCCCHHHHHHHHHHHHHHhhhcC-----CCeEEEeCC-CHHHHHHHHHhcCCCCE
Confidence 44556777899999999988753 235665443333455544332221 467655542 2234565566 59998
Q ss_pred EE-cCCCC------CHHHHHHHhCCCeeEEecCCcCccCCCHH---HHHHHHHHHH-HHcC--CCCeEEecCCC-CC
Q 016596 304 VS-LDWTV------DMAEGRRRLGPDVAVQGNVDPGALFGSKD---FITNRINDTV-RKAG--RWKHILNLGHG-IK 366 (386)
Q Consensus 304 l~-~d~~~------dl~e~~~~~g~~~~l~G~vd~~~l~gt~e---ev~~~v~~~i-~~~~--~~g~Ils~gc~-i~ 366 (386)
++ +.... .+..+.+++|-.+++|- .|....-.|.+ ++.+.+.+++ ...| ....|+-||-+ +.
T Consensus 110 INdIs~~~~d~~~~~~~~l~a~~ga~vV~mh-~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilDPgig~~g 185 (300)
T 3k13_A 110 VNSISLKEGEEVFLEHARIIKQYGAATVVMA-FDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFDPNVLAVA 185 (300)
T ss_dssp EEEECSTTCHHHHHHHHHHHHHHTCEEEEES-EETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEECCCCCCS
T ss_pred EEeCCcccCChhHHHHHHHHHHhCCeEEEEe-eCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCccC
Confidence 84 43321 35567777887666653 22222222333 3444444554 4455 36899999885 43
No 123
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=81.55 E-value=6 Score=35.71 Aligned_cols=42 Identities=14% Similarity=0.353 Sum_probs=23.6
Q ss_pred HHHHHHHHHhhCCCCcEEEE-ecCCcc---h---HHHHHhcCCCEEEcCC
Q 016596 266 LKQIVDTVKQTHPDLSLILY-ASGSGG---L---LERLALTGVDVVSLDW 308 (386)
Q Consensus 266 ~k~l~~~i~~~~~~~~~~~H-~cG~~~---~---l~~l~e~g~d~l~~d~ 308 (386)
+++.++.+++.+ ...++-| .+|+.. . +..+.+.|+|++.++.
T Consensus 4 ~~~~f~~~~~~~-~~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~ 52 (268)
T 1qop_A 4 YENLFAQLNDRR-EGAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGV 52 (268)
T ss_dssp HHHHHHHHHHTT-CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEEC
T ss_pred HHHHHHHHHhcC-CceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECC
Confidence 345555555432 2223333 578762 2 3556678999987754
No 124
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=81.47 E-value=8.6 Score=33.28 Aligned_cols=140 Identities=17% Similarity=0.178 Sum_probs=78.3
Q ss_pred HHHHHHHHhCCCEEE-Ee-cCCcCCCCHHHHHHhhH--------------HHHHHHHHHHHhhCCCCcEEEEecCCcc--
Q 016596 230 KYVQYQADNGAQAVQ-IF-DSWATELSPVDFEEFSL--------------PYLKQIVDTVKQTHPDLSLILYASGSGG-- 291 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~-i~-d~~~~~iSp~~f~ef~~--------------P~~k~l~~~i~~~~~~~~~~~H~cG~~~-- 291 (386)
+-++...++|+|.+- ++ ..+.-.+|++.-++... +...++.+.+.+.+ .-+++.+|+.+
T Consensus 13 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~~---ld~vQLHG~e~~~ 89 (205)
T 1nsj_A 13 EDALFSVESGADAVGFVFYPKSKRYISPEDARRISVELPPFVFRVGVFVNEEPEKILDVASYVQ---LNAVQLHGEEPIE 89 (205)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHHT---CSEEEECSCCCHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhhC---CCEEEECCCCCHH
Confidence 345567789999764 33 34445899998887742 23455555555542 33667778653
Q ss_pred hHHHHH---------------------hcCCCEEEcCCC----------CCHHHHHH--HhCCCeeEEecCCcCccCCCH
Q 016596 292 LLERLA---------------------LTGVDVVSLDWT----------VDMAEGRR--RLGPDVAVQGNVDPGALFGSK 338 (386)
Q Consensus 292 ~l~~l~---------------------e~g~d~l~~d~~----------~dl~e~~~--~~g~~~~l~G~vd~~~l~gt~ 338 (386)
.+..+. ++.+|.+-+|.. .|...+++ .....+.|.||++|
T Consensus 90 ~~~~l~~~~~vika~~v~~~~~l~~~~~~~~d~~LlD~~~~~~GGtG~~fdw~~l~~~~~~~~p~~LAGGL~p------- 162 (205)
T 1nsj_A 90 LCRKIAERILVIKAVGVSNERDMERALNYREFPILLDTKTPEYGGSGKTFDWSLILPYRDRFRYLVLSGGLNP------- 162 (205)
T ss_dssp HHHHHHTTSEEEEEEEESSHHHHHHHGGGTTSCEEEEESCSSSSSCCSCCCGGGTGGGGGGSSCEEEESSCCT-------
T ss_pred HHHHHhcCCCEEEEEEcCCHHHHHHHHHcCCCEEEECCCCCCCCCCCCccCHHHHHhhhcCCCcEEEECCCCH-------
Confidence 233331 122333322210 23333322 11233555666544
Q ss_pred HHHHHHHHHHHHHcCCCCeEEecCCCC-CCCCcHHHHHHHHHHHHh
Q 016596 339 DFITNRINDTVRKAGRWKHILNLGHGI-KVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 339 eev~~~v~~~i~~~~~~g~Ils~gc~i-~~~tp~Eni~a~~~a~~~ 383 (386)
|.|.+.++. .+.-|.=+++|-+. |.--.++.|+++++++|.
T Consensus 163 eNV~~ai~~----~~p~gVDvsSGvE~~pG~KD~~ki~~fi~~~r~ 204 (205)
T 1nsj_A 163 ENVRSAIDV----VRPFAVDVSSGVEAFPGKKDHDSIKMFIKNAKG 204 (205)
T ss_dssp TTHHHHHHH----HCCSEEEESGGGEEETTEECHHHHHHHHHHHHT
T ss_pred HHHHHHHHh----cCCCEEEECCceecCCCCcCHHHHHHHHHHHhh
Confidence 555444433 35557788888776 444589999999999885
No 125
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=81.28 E-value=12 Score=34.25 Aligned_cols=72 Identities=15% Similarity=0.235 Sum_probs=49.4
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|
T Consensus 23 l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~G 95 (297)
T 2rfg_A 23 LAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVA----LVAEQAQG---RVPVIAGAGSNNPVEAVRYAQHAQQAG 95 (297)
T ss_dssp HHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCBEEECCCSSHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHH----HHHHHhCC---CCeEEEccCCCCHHHHHHHHHHHHhcC
Confidence 344556677899999998777664 699988777554 33444443 4789999887654 23 4445689
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 96 adavlv 101 (297)
T 2rfg_A 96 ADAVLC 101 (297)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998754
No 126
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=81.28 E-value=3.7 Score=37.33 Aligned_cols=108 Identities=11% Similarity=0.159 Sum_probs=57.9
Q ss_pred HHHHHHHHHhhCCCCcEEEEecCCcc------hHHHHHhcCCCEEEcCCC----------------------CC------
Q 016596 266 LKQIVDTVKQTHPDLSLILYASGSGG------LLERLALTGVDVVSLDWT----------------------VD------ 311 (386)
Q Consensus 266 ~k~l~~~i~~~~~~~~~~~H~cG~~~------~l~~l~e~g~d~l~~d~~----------------------~d------ 311 (386)
+++.++.+++.+....+-+-+.|+-. .+..+.+.|+|++.+.-. ++
T Consensus 7 i~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~ 86 (271)
T 3nav_A 7 YQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFE 86 (271)
T ss_dssp HHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHH
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHH
Confidence 56667777765422233344568742 246667789999876311 11
Q ss_pred -HHHHHHH-hCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 312 -MAEGRRR-LGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 -l~e~~~~-~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
++++|+. ..-.+.+||-.+|..-+|. .+.++++.+.+.+ |+|+ +|.|+|....+.+++++||
T Consensus 87 ~v~~~r~~~~~~Pivlm~Y~n~v~~~g~----~~f~~~~~~aGvd-GvIi-------pDlp~ee~~~~~~~~~~~g 150 (271)
T 3nav_A 87 LIAQIRARNPETPIGLLMYANLVYARGI----DDFYQRCQKAGVD-SVLI-------ADVPTNESQPFVAAAEKFG 150 (271)
T ss_dssp HHHHHHHHCTTSCEEEEECHHHHHHTCH----HHHHHHHHHHTCC-EEEE-------TTSCGGGCHHHHHHHHHTT
T ss_pred HHHHHHhcCCCCCEEEEecCcHHHHHhH----HHHHHHHHHCCCC-EEEE-------CCCCHHHHHHHHHHHHHcC
Confidence 1234444 2334666776666221343 4445555554323 5555 3455556666777777765
No 127
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=81.09 E-value=11 Score=35.34 Aligned_cols=83 Identities=14% Similarity=0.262 Sum_probs=53.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|+++|++..+.+. .+|.+..++++. .+++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 56 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~----~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~Gad 128 (343)
T 2v9d_A 56 ALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIAR----FAIDHVDR---RVPVLIGTGGTNARETIELSQHAQQAGAD 128 (343)
T ss_dssp HHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCSSCHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 3445577899999998877764 699988777553 34444443 4799999877654 23 444678999
Q ss_pred EEEcC----CCCCHHHHHHHh
Q 016596 303 VVSLD----WTVDMAEGRRRL 319 (386)
Q Consensus 303 ~l~~d----~~~dl~e~~~~~ 319 (386)
++.+- ...+-+++.+.|
T Consensus 129 avlv~~P~Y~~~s~~~l~~~f 149 (343)
T 2v9d_A 129 GIVVINPYYWKVSEANLIRYF 149 (343)
T ss_dssp EEEEECCSSSCCCHHHHHHHH
T ss_pred EEEECCCCCCCCCHHHHHHHH
Confidence 77432 124555555444
No 128
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=81.02 E-value=14 Score=33.87 Aligned_cols=71 Identities=8% Similarity=0.034 Sum_probs=47.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+
T Consensus 27 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~A~~~Ga 99 (294)
T 3b4u_A 27 IAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILS----SFIAAGIA---PSRIVTGVLVDSIEDAADQSAEALNAGA 99 (294)
T ss_dssp HHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHH----HHHHTTCC---GGGEEEEECCSSHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCccHHHHHHHHHHHHhcCC
Confidence 34455677899999998877764 699887776543 33333332 4789999887653 23 44457899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 100 davlv 104 (294)
T 3b4u_A 100 RNILL 104 (294)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98754
No 129
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=80.89 E-value=5.6 Score=36.03 Aligned_cols=42 Identities=14% Similarity=0.243 Sum_probs=26.4
Q ss_pred HHHHHHHHHhhCCCCcEEEEecCCcc------hHHHHHhcCCCEEEcC
Q 016596 266 LKQIVDTVKQTHPDLSLILYASGSGG------LLERLALTGVDVVSLD 307 (386)
Q Consensus 266 ~k~l~~~i~~~~~~~~~~~H~cG~~~------~l~~l~e~g~d~l~~d 307 (386)
+++.++.+++.+....+-+-++|+.. .+..+.+.|+|++.++
T Consensus 5 i~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElg 52 (267)
T 3vnd_A 5 YQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELG 52 (267)
T ss_dssp HHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 55667777665422333345678752 2466677899999775
No 130
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=80.74 E-value=10 Score=35.55 Aligned_cols=71 Identities=18% Similarity=0.139 Sum_probs=47.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCC-CCcEEEEecCCcch-H---HHHHhcC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP-DLSLILYASGSGGL-L---ERLALTG 300 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~-~~~~~~H~cG~~~~-l---~~l~e~g 300 (386)
+.+.+.++.+.++|++.|.+.|..+. ..|..+.+++ +.+++..+ +.|+-+|++-+... + -.-.+.|
T Consensus 149 e~~~~ia~~~~~~Ga~~i~l~DT~G~-~~P~~v~~lv--------~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aG 219 (345)
T 1nvm_A 149 EKLAEQGKLMESYGATCIYMADSGGA-MSMNDIRDRM--------RAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEG 219 (345)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTCC-CCHHHHHHHH--------HHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHCCCCEEEECCCcCc-cCHHHHHHHH--------HHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcC
Confidence 44455556667789999999888765 4577666543 44444432 57899999987652 2 3335789
Q ss_pred CCEEE
Q 016596 301 VDVVS 305 (386)
Q Consensus 301 ~d~l~ 305 (386)
++.+.
T Consensus 220 a~~vd 224 (345)
T 1nvm_A 220 CDRVD 224 (345)
T ss_dssp CCEEE
T ss_pred CCEEE
Confidence 99885
No 131
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=80.71 E-value=6.4 Score=40.91 Aligned_cols=87 Identities=21% Similarity=0.228 Sum_probs=58.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~ 301 (386)
++.++.++++.++|++.|.+.|..+ .+.|..+.++ +..+++..++.++-+|++-+... + ..+ .+.|+
T Consensus 261 e~~~~~a~~l~~~Ga~~I~l~DT~G-~~~P~~v~~l--------V~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa 331 (718)
T 3bg3_A 261 QYYMGLAEELVRAGTHILCIKDMAG-LLKPTACTML--------VSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGA 331 (718)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECTTS-CCCHHHHHHH--------HHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcCC-CcCHHHHHHH--------HHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCC
Confidence 4555667778889999999988766 5677776654 34444433346889999887652 2 333 46899
Q ss_pred CEEEc-----CC---CCCHHHHHHHhCC
Q 016596 302 DVVSL-----DW---TVDMAEGRRRLGP 321 (386)
Q Consensus 302 d~l~~-----d~---~~dl~e~~~~~g~ 321 (386)
+.+.. .. ..+++++...+..
T Consensus 332 ~~VD~ti~GlGertGN~~lE~vv~~L~~ 359 (718)
T 3bg3_A 332 DVVDVAADSMSGMTSQPSMGALVACTRG 359 (718)
T ss_dssp SEEEEBCGGGCSTTSCCBHHHHHHHHTT
T ss_pred CEEEecCcccccccCchhHHHHHHHHHh
Confidence 98853 22 3578887777754
No 132
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=80.67 E-value=20 Score=30.82 Aligned_cols=141 Identities=13% Similarity=0.126 Sum_probs=81.2
Q ss_pred HHHHHHHHhCCCEEE-Ee-cCCcCCCCHHHHHHhhH--------------HHHHHHHHHHHhhCCCCcEEEEecCCcc--
Q 016596 230 KYVQYQADNGAQAVQ-IF-DSWATELSPVDFEEFSL--------------PYLKQIVDTVKQTHPDLSLILYASGSGG-- 291 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~-i~-d~~~~~iSp~~f~ef~~--------------P~~k~l~~~i~~~~~~~~~~~H~cG~~~-- 291 (386)
+-+++..++|+|.+- ++ ..+.-.+||+.-++... +...++.+.+.+. + .-+++.+|+.+
T Consensus 12 eda~~a~~~GaD~iGfif~~~SpR~V~~~~a~~i~~~~~~~~~~VgVfvn~~~~~i~~~~~~~--~-ld~vQLHG~e~~~ 88 (203)
T 1v5x_A 12 EDALLAEALGAFALGFVLAPGSRRRIAPEAARAIGEALGPFVVRVGVFRDQPPEEVLRLMEEA--R-LQVAQLHGEEPPE 88 (203)
T ss_dssp HHHHHHHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHSCSSSEEEEEESSCCHHHHHHHHHHT--T-CSEEEECSCCCHH
T ss_pred HHHHHHHHcCCCEEEEEecCCCCCcCCHHHHHHHHHhCCCCCCEEEEEeCCCHHHHHHHHHhh--C-CCEEEECCCCCHH
Confidence 345567789999764 33 34445899998887742 2345555666654 2 34667778754
Q ss_pred hHHHHH--------------------hcCCCEEEcCC-------CCCHHHHHH--HhCCCeeEEecCCcCccCCCHHHHH
Q 016596 292 LLERLA--------------------LTGVDVVSLDW-------TVDMAEGRR--RLGPDVAVQGNVDPGALFGSKDFIT 342 (386)
Q Consensus 292 ~l~~l~--------------------e~g~d~l~~d~-------~~dl~e~~~--~~g~~~~l~G~vd~~~l~gt~eev~ 342 (386)
.+..+. ++.+|.+-+|. ..|...+++ .....+.|.||++| |.|.
T Consensus 89 ~~~~l~~~~~vika~~v~~~~~l~~~~~~~d~~LlD~~~gGtG~~fdW~~l~~~~~~~~p~~LAGGL~p-------eNV~ 161 (203)
T 1v5x_A 89 WAEAVGRFYPVIKAFPLEGPARPEWADYPAQALLLDGKRPGSGEAYPRAWAKPLLATGRRVILAGGIAP-------ENLE 161 (203)
T ss_dssp HHHHHTTTSCEEEEEECSSSCCGGGGGSSCSEEEEECSSTTSCCCCCGGGGHHHHHTTSCEEECSSCCS-------TTHH
T ss_pred HHHHhccCCCEEEEEEcCChHhhhhhhcCCCEEEEcCCCCCCCCccCHHHHHhhhccCCcEEEECCCCH-------HHHH
Confidence 244442 11123333332 124433333 11234666676655 4444
Q ss_pred HHHHHHHHHcCCCCeEEecCCCC-CCCCcHHHHHHHHHHHHhhc
Q 016596 343 NRINDTVRKAGRWKHILNLGHGI-KVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 343 ~~v~~~i~~~~~~g~Ils~gc~i-~~~tp~Eni~a~~~a~~~yg 385 (386)
+.+ ..+.-|.=+++|-+. |.--.++.|+++++++|.+.
T Consensus 162 ~ai-----~~~p~gVDvsSGvE~~pG~KD~~ki~~fi~~~r~~~ 200 (203)
T 1v5x_A 162 EVL-----ALRPYALDLASGVEEAPGVKSAEKLRALFARLASLR 200 (203)
T ss_dssp HHH-----HHCCSEEEESGGGEEETTEECHHHHHHHHHHHHHTC
T ss_pred HHH-----hcCCCEEEeCCceecCCCCcCHHHHHHHHHHHHHhh
Confidence 433 335557778888776 44468999999999999763
No 133
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=80.49 E-value=35 Score=31.34 Aligned_cols=121 Identities=19% Similarity=0.206 Sum_probs=73.0
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCC-CE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGA-QA 242 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~-d~ 242 (386)
.+.++...+..++.+||++.+++.- ++-.++.++...++|+ |+
T Consensus 63 ~~v~~~~~~~~~grvpViaGvg~~~------------------------------------t~~ai~la~~A~~~Ga~da 106 (311)
T 3h5d_A 63 LELFAAVQKVVNGRVPLIAGVGTND------------------------------------TRDSIEFVKEVAEFGGFAA 106 (311)
T ss_dssp HHHHHHHHHHSCSSSCEEEECCCSS------------------------------------HHHHHHHHHHHHHSCCCSE
T ss_pred HHHHHHHHHHhCCCCcEEEeCCCcC------------------------------------HHHHHHHHHHHHhcCCCcE
Confidence 4455666677777788887765431 1222455666778887 99
Q ss_pred EEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCc-c--hHHHHHhcCCCEEEc-CCCCCHHH
Q 016596 243 VQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSG-G--LLERLALTGVDVVSL-DWTVDMAE 314 (386)
Q Consensus 243 i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~-~--~l~~l~e~g~d~l~~-d~~~dl~e 314 (386)
+.+.-|.-.-.|++. +.-|++++.++. +.|++++.+ |.. . .+..+.+.+ +++.+ +.. |+..
T Consensus 107 vlv~~P~y~~~s~~~----l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~La~~p-nIvgiKdss-d~~~ 175 (311)
T 3h5d_A 107 GLAIVPYYNKPSQEG----MYQHFKAIADAS-----DLPIIIYNIPGRVVVELTPETMLRLADHP-NIIGVKECT-SLAN 175 (311)
T ss_dssp EEEECCCSSCCCHHH----HHHHHHHHHHSC-----SSCEEEEECHHHHSSCCCHHHHHHHHTST-TEEEEEECS-CHHH
T ss_pred EEEcCCCCCCCCHHH----HHHHHHHHHHhC-----CCCEEEEecccccCCCCCHHHHHHHhcCC-CEEEEEeCC-CHHH
Confidence 988777654445433 445777777775 468888764 432 2 245566653 56655 334 7654
Q ss_pred H---HHHhCCCeeEEecCCc
Q 016596 315 G---RRRLGPDVAVQGNVDP 331 (386)
Q Consensus 315 ~---~~~~g~~~~l~G~vd~ 331 (386)
. .+..+++..+..|-|.
T Consensus 176 ~~~~~~~~~~~f~v~~G~d~ 195 (311)
T 3h5d_A 176 MAYLIEHKPEEFLIYTGEDG 195 (311)
T ss_dssp HHHHHHHCCSSCEEEECCGG
T ss_pred HHHHHHHcCCCEEEEECcHH
Confidence 4 4445666666655554
No 134
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=80.42 E-value=9.5 Score=34.95 Aligned_cols=70 Identities=20% Similarity=0.276 Sum_probs=46.9
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCC---CCcEEEEecCCcch-H-HHH--Hhc
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP---DLSLILYASGSGGL-L-ERL--ALT 299 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~---~~~~~~H~cG~~~~-l-~~l--~e~ 299 (386)
+..+.++.+.++|++.|.++|..+ .+.|..+.+++ +.+++..+ ++++-+|++-+... + ..+ .+.
T Consensus 151 ~~~~~~~~~~~~G~~~i~l~DT~G-~~~P~~v~~lv--------~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~a 221 (293)
T 3ewb_X 151 FLIEAVQTAIDAGATVINIPDTVG-YTNPTEFGQLF--------QDLRREIKQFDDIIFASHCHDDLGMATANALAAIEN 221 (293)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSSS-CCCHHHHHHHH--------HHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHcCCCEEEecCCCC-CCCHHHHHHHH--------HHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHh
Confidence 445556677788999999988776 47887776644 33333322 25688999988652 3 333 468
Q ss_pred CCCEEE
Q 016596 300 GVDVVS 305 (386)
Q Consensus 300 g~d~l~ 305 (386)
|++.+.
T Consensus 222 Ga~~vd 227 (293)
T 3ewb_X 222 GARRVE 227 (293)
T ss_dssp TCCEEE
T ss_pred CCCEEE
Confidence 999885
No 135
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=80.28 E-value=11 Score=34.63 Aligned_cols=70 Identities=16% Similarity=0.177 Sum_probs=47.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 41 ~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~st~~ai~la~~A~~~Gad 113 (304)
T 3cpr_A 41 EVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLK----AVREEVGD---RAKLIAGVGTNNTRTSVELAEAAASAGAD 113 (304)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHH----HHHHHHTT---TSEEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEecCCCCCHHHHHHHHHHHHhcCCC
Confidence 3444567889999998877764 699988777553 33444443 4799999887654 23 445678999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 114 avlv 117 (304)
T 3cpr_A 114 GLLV 117 (304)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7743
No 136
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=80.16 E-value=17 Score=33.19 Aligned_cols=72 Identities=19% Similarity=0.242 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++++.- .++.+.. .+|++.|+.++.+ -+ ....+.|
T Consensus 25 l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~----~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~G 97 (292)
T 3daq_A 25 LKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKT----VIDLVDK---RVPVIAGTGTNDTEKSIQASIQAKALG 97 (292)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHH----HHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHH----HHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHHcC
Confidence 334455677899999998877764 7898888776543 3444432 5799999866543 23 4456789
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 98 adavlv 103 (292)
T 3daq_A 98 ADAIML 103 (292)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997743
No 137
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=79.71 E-value=33 Score=30.46 Aligned_cols=163 Identities=10% Similarity=0.013 Sum_probs=93.1
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCC---C-CHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC
Q 016596 213 QPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATE---L-SPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG 288 (386)
Q Consensus 213 ~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~---i-Sp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG 288 (386)
+|+...+.++ .+.+.++...+.|++.|.+.-.++.+ . +.+...+.+...++++.+.++++ |+.+.+|.++
T Consensus 95 d~~~r~~~~~----~~~~~i~~a~~lGa~~v~~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lE~~~ 168 (287)
T 3kws_A 95 DPAIRKECMD----TMKEIIAAAGELGSTGVIIVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQH--GTSVIFEPLN 168 (287)
T ss_dssp SHHHHHHHHH----HHHHHHHHHHHTTCSEEEECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHT--TCCEEECCCC
T ss_pred CHHHHHHHHH----HHHHHHHHHHHcCCCEEEEecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEecC
Confidence 5655555444 44455666778899988775433321 1 45556667788999999999987 6888898764
Q ss_pred ----C---cc--hHHHHHhcCCC--EEEcC------CCCCHHHHHHHhCCCeeEEecCCc-C-ccCCCHH--HHHHHHHH
Q 016596 289 ----S---GG--LLERLALTGVD--VVSLD------WTVDMAEGRRRLGPDVAVQGNVDP-G-ALFGSKD--FITNRIND 347 (386)
Q Consensus 289 ----~---~~--~l~~l~e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l~G~vd~-~-~l~gt~e--ev~~~v~~ 347 (386)
. .. .+..+.+++.. .+.+| ...|+.+.-+.+++++..+=-=|. . ..-|+-+ -=-+.+.+
T Consensus 169 ~~~~~~~~~~~~~~~ll~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHlkD~~~r~~pG~G~d~id~~~i~~ 248 (287)
T 3kws_A 169 RKECFYLRQVADAASLCRDINNPGVRCMGDFWHMTWEETSDMGAFISGGEYLQHVHVASRKRRSMPGEDGDADNYINGFK 248 (287)
T ss_dssp TTTCSSCCCHHHHHHHHHHHCCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEEEEECCTTTSCSTTTTGGGCCCHHHHH
T ss_pred cccCcccCCHHHHHHHHHHcCCCCeeEEeehHHHHhcCCCHHHHHHHhhhhEEEEEeCCCCCCCCCCCCCCCcCHHHHHH
Confidence 1 11 23444555533 23343 135888888888877544221122 1 1223222 11244556
Q ss_pred HHHHcC-CCCeEEecCCCCCCCCcHHHHHHHHHHHHhh
Q 016596 348 TVRKAG-RWKHILNLGHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 348 ~i~~~~-~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
.++..+ .|-+++=.- +...|.+.++.-++..+++
T Consensus 249 ~L~~~gy~g~i~lE~~---~~~~~~~~~~~s~~~l~~~ 283 (287)
T 3kws_A 249 GLKMIGYNNYVSFECG---CQGDRNVVVPAAVKLLREQ 283 (287)
T ss_dssp HHHHTTCCSEEEECCC---CSSCHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCccEEEEec---CCCCHHHHHHHHHHHHHHH
Confidence 666666 544444322 2245777887777776653
No 138
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=79.69 E-value=33 Score=30.57 Aligned_cols=77 Identities=13% Similarity=0.138 Sum_probs=45.3
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhhH---------HHHHHHHHHHHhhCCCCcEEEEecCCcc------
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFSL---------PYLKQIVDTVKQTHPDLSLILYASGSGG------ 291 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~~---------P~~k~l~~~i~~~~~~~~~~~H~cG~~~------ 291 (386)
..+.++.+.++|+|.|-+.-|..+ +.+...-.+-.. ...-+++..+++..++.|+++- +.++
T Consensus 33 ~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m--~y~n~v~~~g 110 (262)
T 2ekc_A 33 SLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM--TYYNPIFRIG 110 (262)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE--CCHHHHHHHC
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE--ecCcHHHHhh
Confidence 366778888999999988766543 222222222211 1233566677765324677663 3332
Q ss_pred ---hHHHHHhcCCCEEEc
Q 016596 292 ---LLERLALTGVDVVSL 306 (386)
Q Consensus 292 ---~l~~l~e~g~d~l~~ 306 (386)
+++...+.|+|.+.+
T Consensus 111 ~~~f~~~~~~aG~dgvii 128 (262)
T 2ekc_A 111 LEKFCRLSREKGIDGFIV 128 (262)
T ss_dssp HHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHcCCCEEEE
Confidence 346677889997755
No 139
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=79.67 E-value=11 Score=34.68 Aligned_cols=70 Identities=23% Similarity=0.324 Sum_probs=48.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~----~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~Gad 109 (301)
T 1xky_A 37 KLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYR----HVVSVVDK---RVPVIAGTGSNNTHASIDLTKKATEVGVD 109 (301)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSCHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CceEEeCCCCCCHHHHHHHHHHHHhcCCC
Confidence 4445677899999998877764 699988877654 33444443 4789999887654 23 445678999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 110 avlv 113 (301)
T 1xky_A 110 AVML 113 (301)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7743
No 140
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=79.41 E-value=37 Score=31.18 Aligned_cols=140 Identities=11% Similarity=0.150 Sum_probs=70.7
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCc-chHHHHHhc--------
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSG-GLLERLALT-------- 299 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~-~~l~~l~e~-------- 299 (386)
..+++..+.+..+|.- +|+...+-....+..-+...+++. ++|+.+|.+ |.. ..+...++.
T Consensus 42 Avl~AAee~~sPvIlq-------~s~g~~~y~g~~~~~~~~~~A~~~--~VPVaLHlDHg~~~e~i~~ai~~~~~~~~~~ 112 (306)
T 3pm6_A 42 AIIRAAEHKRSPAMIL-------LFPWAIQYADSLLVRTAASACRAA--SVPITLHLDHAQDPEIIKRAADLSRSETHEP 112 (306)
T ss_dssp HHHHHHHHTTCCEEEE-------ECHHHHHHHTTHHHHHHHHHHHHC--SSCEEEEEEEECCHHHHHHHHHTC------C
T ss_pred HHHHHHHHhCCCEEEE-------cChhHHhhccHHHHHHHHHHHHHC--CCCEEEEcCCCCCHHHHHHHHHhhhhccCCC
Confidence 3344555677887653 233221111112222233444444 689999986 433 245666777
Q ss_pred CCCEEEcCCC-C----CHHHHHHHh----CCCeeEE------ecC----Cc----CccCCCHHHHHHHHHHHHHHcCCCC
Q 016596 300 GVDVVSLDWT-V----DMAEGRRRL----GPDVAVQ------GNV----DP----GALFGSKDFITNRINDTVRKAGRWK 356 (386)
Q Consensus 300 g~d~l~~d~~-~----dl~e~~~~~----g~~~~l~------G~v----d~----~~l~gt~eev~~~v~~~i~~~~~~g 356 (386)
|+..+.+|.. . +++..++.+ ...+.+= |+. +. ..++-+|||+.+.++--++.+.
T Consensus 113 GFtSVMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LA--- 189 (306)
T 3pm6_A 113 GFDSIMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLA--- 189 (306)
T ss_dssp CCSEEEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEEC---
T ss_pred CCCEEEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEEE---
Confidence 9999888754 2 343333322 1123332 221 11 1246889999988831112111
Q ss_pred eEEecCCCCC----CCCcHHHHHHHHHHH
Q 016596 357 HILNLGHGIK----VGTPEENVAHFFEVA 381 (386)
Q Consensus 357 ~Ils~gc~i~----~~tp~Eni~a~~~a~ 381 (386)
.-+++.|++- +...++.++.+-+++
T Consensus 190 vaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v 218 (306)
T 3pm6_A 190 PAFGNVHGNYGPRGVQLDYERLQRINEAV 218 (306)
T ss_dssp CCSSCCSSCCCTTCCCCCHHHHHHHHHHH
T ss_pred EEcCccccCcCCCCCccCHHHHHHHHHHh
Confidence 1123345542 445777777776655
No 141
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=79.17 E-value=10 Score=34.60 Aligned_cols=86 Identities=9% Similarity=0.154 Sum_probs=56.7
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|
T Consensus 24 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pvi~Gvg~~~t~~ai~la~~a~~~G 96 (291)
T 3a5f_A 24 LSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIK----FVIDKVNK---RIPVIAGTGSNNTAASIAMSKWAESIG 96 (291)
T ss_dssp HHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCcccHHHHHHHHHHHHhcC
Confidence 344556677899999998877764 699988777553 33444443 4799999887654 23 4456789
Q ss_pred CCEEEcC----CCCCHHHHHHHhC
Q 016596 301 VDVVSLD----WTVDMAEGRRRLG 320 (386)
Q Consensus 301 ~d~l~~d----~~~dl~e~~~~~g 320 (386)
+|++.+- +..+-+++.+.|.
T Consensus 97 adavlv~~P~y~~~s~~~l~~~f~ 120 (291)
T 3a5f_A 97 VDGLLVITPYYNKTTQKGLVKHFK 120 (291)
T ss_dssp CSEEEEECCCSSCCCHHHHHHHC-
T ss_pred CCEEEEcCCCCCCCCHHHHHHHHH
Confidence 9987432 1356666666553
No 142
>3tn4_A Phosphotriesterase; lactonase, hydrolase; HET: KCX; 1.50A {Geobacillus kaustophilus} PDB: 3tnb_A* 3tn3_A* 3tn5_A* 3tn6_A* 3ojg_A* 3orw_A* 3f4c_A* 3f4d_A*
Probab=79.15 E-value=26 Score=33.09 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=65.6
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCC----EE-EcCCCCCHHHHHHHhCCCeeE-EecCCcC-c
Q 016596 264 PYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVD----VV-SLDWTVDMAEGRRRLGPDVAV-QGNVDPG-A 333 (386)
Q Consensus 264 P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d----~l-~~d~~~dl~e~~~~~g~~~~l-~G~vd~~-~ 333 (386)
..++..+.+.++. |.|+++|+-.... .++.+.+.|++ ++ +.+...|+..+++.+....-| +.++-.. .
T Consensus 193 k~frA~a~aa~et--G~Pv~iHt~~~~~~~e~l~iL~eeG~~~~~vvi~H~~~~~d~~~~~~~l~~G~yl~fD~iG~~~~ 270 (360)
T 3tn4_A 193 MFFRAAARAQKET--GAVIITHTQEGTMGPEQAAYLLEHGADPKKIVIGHMCDNTDPDYHRKTLAYGVYIAFDRFGIQGM 270 (360)
T ss_dssp HHHHHHHHHHHHH--CCEEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECCTTCCCS
T ss_pred HHHHHHHHHHHHh--CCcEEEEcCcccCCHHHHHHHHHcCCCCCceEEEcCCCCCCHHHHHHHHHcCCEEEEcccccccc
Confidence 4566777777887 6899999875543 36888898886 34 556667988888877533222 1111111 1
Q ss_pred c-CCCHHHHHHHHHHHHHHcCCCCeEEecCC
Q 016596 334 L-FGSKDFITNRINDTVRKAGRWKHILNLGH 363 (386)
Q Consensus 334 l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc 363 (386)
. .-+.++-.+.++++++.+.....+|++++
T Consensus 271 ~~~p~d~~r~~~l~~lv~~g~~drILLstDa 301 (360)
T 3tn4_A 271 VGAPTDEERVRTLLALLRDGYEKQIMLSHDT 301 (360)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCGGGEEECCCC
T ss_pred cCCCChHHHHHHHHHHHHhcCcceEEEecCC
Confidence 2 34556667788888888766689999987
No 143
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=79.02 E-value=28 Score=32.08 Aligned_cols=112 Identities=11% Similarity=0.139 Sum_probs=61.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCc-chHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSG-GLLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~-~~l~~l~e~g~d~l~~d 307 (386)
..+++..+.+..+|.- +|+....-....++..++..+.+.+.++|+.+|.+ |.. ..+..-++.|+..+.+|
T Consensus 32 avi~AAee~~sPvIlq-------~s~g~~~y~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GFtSVMiD 104 (307)
T 3n9r_A 32 AIFEAGNEENSPLFIQ-------ASEGAIKYMGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTSVMID 104 (307)
T ss_dssp HHHHHHHHHTCCEEEE-------EEHHHHHHHCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHhCCCEEEE-------cChhhhhhCCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCCCcEEEE
Confidence 3344555667777653 33332221233455666666655322689999986 433 24566678899999887
Q ss_pred CC-C----CHHHHHHHhC----CCeeEE------ecCC----c---CccCCCHHHHHHHHHHH
Q 016596 308 WT-V----DMAEGRRRLG----PDVAVQ------GNVD----P---GALFGSKDFITNRINDT 348 (386)
Q Consensus 308 ~~-~----dl~e~~~~~g----~~~~l~------G~vd----~---~~l~gt~eev~~~v~~~ 348 (386)
.. . +++..++... ..+++= |+.. . ..++-+|||+.+.+++.
T Consensus 105 gS~~p~eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~T 167 (307)
T 3n9r_A 105 ASHHAFEENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKES 167 (307)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHH
Confidence 54 2 3333333221 113332 2221 1 12467899999988764
No 144
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=78.97 E-value=17 Score=34.73 Aligned_cols=141 Identities=18% Similarity=0.176 Sum_probs=83.3
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc--------chHHHHHhc
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG--------GLLERLALT 299 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~--------~~l~~l~e~ 299 (386)
..+|++.+.+.|...||.+ +.+|+.-.+-+...++++++.+++. |..+++-+-... ..+..|.++
T Consensus 43 ~~~Yi~~a~~~Gf~~IFTS-----L~~~e~~~~~~~~~~~~l~~~a~~~--g~~vi~DVsp~~~~~Lg~s~~dl~~f~~l 115 (385)
T 1x7f_A 43 DMAYISAAARHGFSRIFTC-----LLSVNRPKEEIVAEFKEIINHAKDN--NMEVILDVAPAVFDQLGISYSDLSFFAEL 115 (385)
T ss_dssp HHHHHHHHHTTTEEEEEEE-----ECCC--------HHHHHHHHHHHHT--TCEEEEEECTTCC------CCCTHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEcc-----CCccCCChHHHHHHHHHHHHHHHHC--CCEEEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 3477788888998888743 4567777778888999999999998 577777776643 236788999
Q ss_pred CCCEEEcCCCCCHHHHHHHhCCC--eeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCC-C---CCCcHHH
Q 016596 300 GVDVVSLDWTVDMAEGRRRLGPD--VAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGI-K---VGTPEEN 373 (386)
Q Consensus 300 g~d~l~~d~~~dl~e~~~~~g~~--~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i-~---~~tp~En 373 (386)
|++++=+|...+..+..+.--.. +.|.=|..+ | .+++.++++...+..-|.+ -|+. | .+-+.+-
T Consensus 116 Gi~gLRLD~Gf~~~eia~ls~n~~glkIeLNASt-----~----~~~l~~l~~~~~n~~~l~a-cHNFYPr~~TGLs~~~ 185 (385)
T 1x7f_A 116 GADGIRLDVGFDGLTEAKMTNNPYGLKIELNVSN-----D----IAYLENILSHQANKSALIG-CHNFYPQKFTGLPYDY 185 (385)
T ss_dssp TCSEEEESSCCSSHHHHHHTTCTTCCEEEEETTS-----C----SSHHHHHTTSSCCGGGEEE-ECCCBCSTTCSBCHHH
T ss_pred CCCEEEEcCCCCHHHHHHHhcCCCCCEEEEeCcC-----C----HHHHHHHHHcCCChHHeEE-eeccCCCCCCCCCHHH
Confidence 99999999998888877764331 333323322 1 1223333333332222332 1343 2 2446666
Q ss_pred HHHHHHHHHhhc
Q 016596 374 VAHFFEVAKAIR 385 (386)
Q Consensus 374 i~a~~~a~~~yg 385 (386)
+...-+..|+||
T Consensus 186 f~~~n~~~k~~G 197 (385)
T 1x7f_A 186 FIRCSERFKKHG 197 (385)
T ss_dssp HHHHHHHHHHTT
T ss_pred HHHHHHHHHHCC
Confidence 666666666665
No 145
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=78.54 E-value=18 Score=31.55 Aligned_cols=127 Identities=15% Similarity=0.162 Sum_probs=70.6
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhc--CCCEEE
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALT--GVDVVS 305 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~--g~d~l~ 305 (386)
++++.+.++|+|++.+...... . . +.+.++.+++. |..+.+.+...+. .+..+.+. ++|.+-
T Consensus 78 ~~i~~~~~agad~v~vH~~~~~-----~---~----~~~~~~~i~~~--g~~igv~~~p~t~~e~~~~~~~~~~~~d~vl 143 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEVSR-----D---N----WQELIQSIKAK--GMRPGVSLRPGTPVEEVFPLVEAENPVELVL 143 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCT-----T---T----HHHHHHHHHHT--TCEEEEEECTTSCGGGGHHHHHSSSCCSEEE
T ss_pred HHHHHHHHcCCCEEEECCCCcc-----c---H----HHHHHHHHHHc--CCCEEEEEeCCCCHHHHHHHHhcCCCCCEEE
Confidence 4556677789999988754321 0 0 13556666665 4566666644433 45666665 777664
Q ss_pred cCC--------CC------CHHHHHHHh-CCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCc
Q 016596 306 LDW--------TV------DMAEGRRRL-GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTP 370 (386)
Q Consensus 306 ~d~--------~~------dl~e~~~~~-g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp 370 (386)
++. .. .++++++.. +-.+.+.|||++. +..+ +++. |-.++|.+++--=.++ |
T Consensus 144 ~~sv~pg~~g~~~~~~~l~~i~~~~~~~~~~pi~v~GGI~~~----ni~~-------~~~a-GaD~vvvGsai~~~~d-~ 210 (228)
T 1h1y_A 144 VMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPS----TIDV-------AASA-GANCIVAGSSIFGAAE-P 210 (228)
T ss_dssp EESSCTTCSSCCCCGGGHHHHHHHHHHCTTSEEEEESSCSTT----THHH-------HHHH-TCCEEEESHHHHTSSC-H
T ss_pred EEeecCCCCcccCCHHHHHHHHHHHHhcCCCCEEEECCcCHH----HHHH-------HHHc-CCCEEEECHHHHCCCC-H
Confidence 411 11 245666666 3346778999773 2222 2222 3236666554111223 7
Q ss_pred HHHHHHHHHHHHh
Q 016596 371 EENVAHFFEVAKA 383 (386)
Q Consensus 371 ~Eni~a~~~a~~~ 383 (386)
.++++.+.+..++
T Consensus 211 ~~~~~~l~~~~~~ 223 (228)
T 1h1y_A 211 GEVISALRKSVEG 223 (228)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7888888776654
No 146
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=78.52 E-value=13 Score=34.13 Aligned_cols=71 Identities=8% Similarity=0.110 Sum_probs=48.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -+ ....+.|+
T Consensus 28 ~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~a~~~Ga 100 (300)
T 3eb2_A 28 GRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVR----ATIEAAQR---RVPVVAGVASTSVADAVAQAKLYEKLGA 100 (300)
T ss_dssp HHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHH----HHHHHHTT---SSCBEEEEEESSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCCCHHHHHHHHHHHHHcCC
Confidence 34445577899999988776664 799888777654 34444443 4789999876653 23 45567899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 101 davlv 105 (300)
T 3eb2_A 101 DGILA 105 (300)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 97743
No 147
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=78.42 E-value=7.1 Score=38.19 Aligned_cols=202 Identities=15% Similarity=0.088 Sum_probs=107.5
Q ss_pred HHHHHHHHHHhCCceeEEe--ecCcHHHHHHHHHcCCCchhHHHHHHHHhh--CHH-HHHHHHH----HHHHHHHHHHHH
Q 016596 164 GKALTILREEVNNEAAVLG--FVGAPFTLASYVVEGGSSKHFSKIKRLAFS--QPK-VLHALLR----KFTTSMAKYVQY 234 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~--~~~gPft~a~~l~~g~~~~~~~~~~~~l~~--~Pe-~v~~ll~----~~~~~~~~~~~~ 234 (386)
++...+|.+.++.++++++ .+..|=++... .. - ...+. +-..+++ +|. .+++++. .|-=...+-+++
T Consensus 195 l~~~~~L~~~ip~~~~vIaEsGI~t~edv~~~-~~-~-a~avL-VGealmr~~d~~~~~~~l~~~~~KICGit~~eda~~ 270 (452)
T 1pii_A 195 LNRTRELAPKLGHNVTVISESGINTYAQVREL-SH-F-ANGFL-IGSALMAHDDLHAAVRRVLLGENKVCGLTRGQDAKA 270 (452)
T ss_dssp THHHHHHHHHHCTTSEEEEESCCCCHHHHHHH-TT-T-CSEEE-ECHHHHTCSCHHHHHHHHHHCSCEECCCCSHHHHHH
T ss_pred HHHHHHHHHhCCCCCeEEEECCCCCHHHHHHH-HH-h-CCEEE-EcHHHcCCcCHHHHHHHHHHHhccccCCCcHHHHHH
Confidence 4455666677776666663 56678554432 11 0 00000 0012233 332 2223221 111122345667
Q ss_pred HHHhCCCEE-EEec-CCcCCCCHHHHHHhhH------------HHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHh
Q 016596 235 QADNGAQAV-QIFD-SWATELSPVDFEEFSL------------PYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLAL 298 (386)
Q Consensus 235 ~~e~G~d~i-~i~d-~~~~~iSp~~f~ef~~------------P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e 298 (386)
..++|+|.+ +++. .+.-.+|+++-++.+. +....+.+.+++.+ .-.+..+|+.. ++..+..
T Consensus 271 a~~~Gad~iGfIf~~~SpR~V~~~~a~~i~~~~~v~~VgVFvn~~~~~i~~~~~~~~---ld~vQLHG~E~~~~~~~l~~ 347 (452)
T 1pii_A 271 AYDAGAIYGGLIFVATSPRCVNVEQAQEVMAAAPLQYVGVFRNHDIADVVDKAKVLS---LAAVQLHGNEEQLYIDTLRE 347 (452)
T ss_dssp HHHHTCSEEEEECCTTCTTBCCHHHHHHHHHHCCCEEEEEESSCCHHHHHHHHHHHT---CSEEEECSCCCHHHHHHHHH
T ss_pred HHhcCCCEEEeecCCCCCCCCCHHHHHHHHhcCCCCEEEEEeCCCHHHHHHHHHhcC---CCEEEECCCCCHHHHHHHHh
Confidence 788999976 3433 4445899999988632 33455555555542 34667778754 3454432
Q ss_pred -c----------------------CCCEEEcCCC-------CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHH
Q 016596 299 -T----------------------GVDVVSLDWT-------VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDT 348 (386)
Q Consensus 299 -~----------------------g~d~l~~d~~-------~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~ 348 (386)
+ .+|.+-+|.. .|..-++...+..+.|.||++| |.|.+.+
T Consensus 348 ~~p~~~~iika~~v~~~~~~~~~~~~d~~LlD~~~GGtG~~fdW~~l~~~~~~p~iLAGGL~p-------~NV~~ai--- 417 (452)
T 1pii_A 348 ALPAHVAIWKALSVGETLPAREFQHVDKYVLDNGQGGSGQRFDWSLLNGQSLGNVLLAGGLGA-------DNCVEAA--- 417 (452)
T ss_dssp HSCTTSEEEEEEECSSSCCCCCCTTCCEEEEESCSCCSSCCCCGGGGTTSCCTTEEEESSCCT-------TTHHHHH---
T ss_pred hccCCCcEEEEEecCCccchhhhhcccEEEecCCCCCCCCccCHHHhhcccCCcEEEEcCCCH-------HHHHHHH---
Confidence 1 1233333321 2443333322334667777765 4554443
Q ss_pred HHHcCCCCeEEecCCCCCCC-CcHHHHHHHHHHHHhh
Q 016596 349 VRKAGRWKHILNLGHGIKVG-TPEENVAHFFEVAKAI 384 (386)
Q Consensus 349 i~~~~~~g~Ils~gc~i~~~-tp~Eni~a~~~a~~~y 384 (386)
+ .+..|.=+|+|-+..|+ -.++.|++++++++.|
T Consensus 418 -~-~~p~gvDvsSGVE~~pG~KD~~ki~~f~~~~r~~ 452 (452)
T 1pii_A 418 -Q-TGCAGLDFNSAVESQPGIKDARLLASVFQTLRAY 452 (452)
T ss_dssp -T-TCCSEEEECGGGEEETTEECHHHHHHHHHHHHCC
T ss_pred -h-cCCCEEEeCCceeCCCCCCCHHHHHHHHHHHhhC
Confidence 3 34457778888776444 5899999999999976
No 148
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=78.41 E-value=5.8 Score=37.22 Aligned_cols=144 Identities=11% Similarity=0.094 Sum_probs=72.5
Q ss_pred HHHHHHHHHH-HHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHH---HHhhCCCCcEEEEecCCcchHHHHHhc
Q 016596 224 FTTSMAKYVQ-YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDT---VKQTHPDLSLILYASGSGGLLERLALT 299 (386)
Q Consensus 224 ~~~~~~~~~~-~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~---i~~~~~~~~~~~H~cG~~~~l~~l~e~ 299 (386)
-++..++.++ .+.++|++.|=+.-+. .||+.|+ +.+++.+. +... ++..+..+.- +...++...+.
T Consensus 39 ~~~~k~~i~~~~L~~~Gv~~IE~g~~~---~~~~~~~-----~v~~~~~~~~~~~~~-~~~~i~~l~~-~~~~i~~a~~~ 108 (337)
T 3ble_A 39 STSEKLNIAKFLLQKLNVDRVEIASAR---VSKGELE-----TVQKIMEWAATEQLT-ERIEILGFVD-GNKTVDWIKDS 108 (337)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEEETT---SCTTHHH-----HHHHHHHHHHHTTCG-GGEEEEEESS-TTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEeCCC---CChhHHH-----HHHHHHhhhhhhccC-CCCeEEEEcc-chhhHHHHHHC
Confidence 3455566777 7888999987653322 2565433 22333332 1111 1223333322 22257888899
Q ss_pred CCCEEEcCCCC-----------CH----H------HHHHHhCCCeeEEecCCcCc-c-CCCHHHHHHHHHHHHHHcCCCC
Q 016596 300 GVDVVSLDWTV-----------DM----A------EGRRRLGPDVAVQGNVDPGA-L-FGSKDFITNRINDTVRKAGRWK 356 (386)
Q Consensus 300 g~d~l~~d~~~-----------dl----~------e~~~~~g~~~~l~G~vd~~~-l-~gt~eev~~~v~~~i~~~~~~g 356 (386)
|++.+.+-... +. + +..+..|.+ +.+++.... - .-+++.+.+.++++.+.+ -
T Consensus 109 g~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~--v~~~~~~~~~~~~~~~~~~~~~~~~~~~~G---a 183 (337)
T 3ble_A 109 GAKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLK--INVYLEDWSNGFRNSPDYVKSLVEHLSKEH---I 183 (337)
T ss_dssp TCCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCE--EEEEEETHHHHHHHCHHHHHHHHHHHHTSC---C
T ss_pred CCCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCE--EEEEEEECCCCCcCCHHHHHHHHHHHHHcC---C
Confidence 99988653211 11 1 222334543 333332100 1 356777777777666543 2
Q ss_pred eEEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 357 HILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 357 ~Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
..++....+- -..|+.+..+++++++
T Consensus 184 ~~i~l~DT~G-~~~P~~v~~lv~~l~~ 209 (337)
T 3ble_A 184 ERIFLPDTLG-VLSPEETFQGVDSLIQ 209 (337)
T ss_dssp SEEEEECTTC-CCCHHHHHHHHHHHHH
T ss_pred CEEEEecCCC-CcCHHHHHHHHHHHHH
Confidence 2343333332 3346667788887765
No 149
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=78.26 E-value=7.8 Score=38.78 Aligned_cols=87 Identities=23% Similarity=0.182 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGVD 302 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~d 302 (386)
+.++.++++.++|++.|.+.|..+ .+.|..+.+++.- +.+.+.+ +.++-+|++.+... + ..+ .+.|++
T Consensus 176 ~~~~~a~~l~~~Gad~I~L~DT~G-~~~P~~v~~lv~~----l~~~~p~---~i~I~~H~Hnd~GlAvAN~laAveAGa~ 247 (539)
T 1rqb_A 176 GYVKLAGQLLDMGADSIALKDMAA-LLKPQPAYDIIKA----IKDTYGQ---KTQINLHCHSTTGVTEVSLMKAIEAGVD 247 (539)
T ss_dssp HHHHHHHHHHHTTCSEEEEEETTC-CCCHHHHHHHHHH----HHHHHCT---TCCEEEEEBCTTSCHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHcCCCEEEeCCCCC-CcCHHHHHHHHHH----HHHhcCC---CceEEEEeCCCCChHHHHHHHHHHhCCC
Confidence 444555567788999999988776 4678777765432 2223311 46889999887652 2 333 578999
Q ss_pred EEEc-----CC---CCCHHHHHHHhCC
Q 016596 303 VVSL-----DW---TVDMAEGRRRLGP 321 (386)
Q Consensus 303 ~l~~-----d~---~~dl~e~~~~~g~ 321 (386)
.+.. .+ ..+++.+.-.+..
T Consensus 248 ~VD~ti~g~GertGN~~lE~lv~~L~~ 274 (539)
T 1rqb_A 248 VVDTAISSMSLGPGHNPTESVAEMLEG 274 (539)
T ss_dssp EEEEBCGGGCSTTSBCBHHHHHHHTTT
T ss_pred EEEEeccccCCCccChhHHHHHHHHHh
Confidence 8853 11 2466666666543
No 150
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=78.06 E-value=23 Score=30.96 Aligned_cols=88 Identities=23% Similarity=0.197 Sum_probs=51.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEEEc
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVVSL 306 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l~~ 306 (386)
+.++.+.++|++.+.+.+-.+. |.. .+.. +++..+++.. +.|++.| |... .++.+.+.|+|.+.+
T Consensus 36 ~~a~~~~~~Gad~i~v~~~d~~------~~~--~~~~-~~i~~i~~~~-~ipv~v~--ggI~~~~~~~~~l~~Gad~V~l 103 (244)
T 1vzw_A 36 EAALAWQRSGAEWLHLVDLDAA------FGT--GDNR-ALIAEVAQAM-DIKVELS--GGIRDDDTLAAALATGCTRVNL 103 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHH------HTS--CCCH-HHHHHHHHHC-SSEEEEE--SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEecCchh------hcC--CChH-HHHHHHHHhc-CCcEEEE--CCcCCHHHHHHHHHcCCCEEEE
Confidence 3446677899999998652221 110 1122 4444444443 5677665 4332 478888999999887
Q ss_pred CCC--CC---HHHHHHHhCCCeeEEecCCc
Q 016596 307 DWT--VD---MAEGRRRLGPDVAVQGNVDP 331 (386)
Q Consensus 307 d~~--~d---l~e~~~~~g~~~~l~G~vd~ 331 (386)
... .+ +.++.+.+|.++.+ ++|+
T Consensus 104 g~~~l~~p~~~~~~~~~~g~~~~~--~l~~ 131 (244)
T 1vzw_A 104 GTAALETPEWVAKVIAEHGDKIAV--GLDV 131 (244)
T ss_dssp CHHHHHCHHHHHHHHHHHGGGEEE--EEEE
T ss_pred CchHhhCHHHHHHHHHHcCCcEEE--EEEc
Confidence 643 23 56677778755433 3554
No 151
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=78.04 E-value=26 Score=34.00 Aligned_cols=146 Identities=10% Similarity=0.040 Sum_probs=73.1
Q ss_pred HHHHHHHHHHhCCCEEEEec-C---CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHh--cC
Q 016596 228 MAKYVQYQADNGAQAVQIFD-S---WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLAL--TG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d-~---~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e--~g 300 (386)
.++.++.+++.|||.|-++- + .+..+|++.=-+-+.|..+.+.+...+...++|+. ++-... .++.-.+ .|
T Consensus 214 al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpIS--IDT~~~~VaeaAL~~~aG 291 (442)
T 3mcm_A 214 RKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVS--IDTRKLEVMQKILAKHHD 291 (442)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEE--EECCCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEE--EeCCCHHHHHHHHhhCCC
Confidence 35566779999999999874 2 23478887766777777666654211110034543 333232 4666666 79
Q ss_pred CCE-EE-cCCCC--CHHHHHHHhCCCeeEEecC-CcCccC-----CCHHHHHHHHHHHHHHc---C--CCCeEEecCCCC
Q 016596 301 VDV-VS-LDWTV--DMAEGRRRLGPDVAVQGNV-DPGALF-----GSKDFITNRINDTVRKA---G--RWKHILNLGHGI 365 (386)
Q Consensus 301 ~d~-l~-~d~~~--dl~e~~~~~g~~~~l~G~v-d~~~l~-----gt~eev~~~v~~~i~~~---~--~~g~Ils~gc~i 365 (386)
+++ +| +.... .+.++.+++|-.+++|=.- .|..+. .-.+|+.++.++.++.+ | ....|+-||-+.
T Consensus 292 a~i~INDVsg~~d~~m~~v~a~~g~~vVlMh~~G~P~tmq~~~y~dvv~ev~~~l~~~i~~a~~aGI~~~~IilDPGiGF 371 (442)
T 3mcm_A 292 IIWMINDVECNNIEQKAQLIAKYNKKYVIIHNLGITDRNQYLDKENAIDNVCDYIEQKKQILLKHGIAQQNIYFDIGFGF 371 (442)
T ss_dssp GCCEEEECCCTTHHHHHHHHHHHTCEEEEECC----------------CTHHHHHHHHHHHHHHHTCCGGGEEEECCCC-
T ss_pred CCEEEEcCCCCCChHHHHHHHHhCCeEEEECCCCCCccccccCcccHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCC
Confidence 998 74 43322 3556667787666664311 121111 11223445544444443 3 357999999887
Q ss_pred CCCCcHHHHHH
Q 016596 366 KVGTPEENVAH 376 (386)
Q Consensus 366 ~~~tp~Eni~a 376 (386)
. .+...|+..
T Consensus 372 ~-Kt~~~nl~l 381 (442)
T 3mcm_A 372 G-KKSDTARYL 381 (442)
T ss_dssp -----------
T ss_pred C-CCHHHHHHH
Confidence 4 344556533
No 152
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=78.03 E-value=52 Score=33.02 Aligned_cols=144 Identities=16% Similarity=0.186 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-c---CCc-----c-
Q 016596 222 RKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-S---GSG-----G- 291 (386)
Q Consensus 222 ~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-c---G~~-----~- 291 (386)
+.+.++..+.++.+++.|+|.+.+ +.. .+... .+-++.++++...+.|+++-. | |.. .
T Consensus 122 ~e~~~~~~~qi~~l~~~gvD~l~~-ET~---~~~~E--------a~aa~~a~~~~~~~~Pv~vS~t~~~~g~~~~G~~~~ 189 (566)
T 1q7z_A 122 EEFYENFRETVEIMVEEGVDGIIF-ETF---SDILE--------LKAAVLAAREVSRDVFLIAHMTFDEKGRSLTGTDPA 189 (566)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEE-EEE---CCHHH--------HHHHHHHHHHHCSSSCEEEEECCCTTSCCTTSCCHH
T ss_pred HHHHHHHHHHHHHHHhCCCCEEEE-ecc---CCHHH--------HHHHHHHHHHhCCCCcEEEEEEEcCCCeeCCCCcHH
Confidence 445666777788888999998764 443 22222 244556666532256776643 3 221 1
Q ss_pred -hHHHHHhcCCCEEEcCCCCCHH-------HHHHHhCCCeeEEec--CC----cCcc-CCCHHHHHHHHHHHHHHcCCCC
Q 016596 292 -LLERLALTGVDVVSLDWTVDMA-------EGRRRLGPDVAVQGN--VD----PGAL-FGSKDFITNRINDTVRKAGRWK 356 (386)
Q Consensus 292 -~l~~l~e~g~d~l~~d~~~dl~-------e~~~~~g~~~~l~G~--vd----~~~l-~gt~eev~~~v~~~i~~~~~~g 356 (386)
.+..+...|++++.+.=...+. ++++....-+.+.-| .+ .... ..+|++..+.+++..+.+ -
T Consensus 190 ~~~~~l~~~~~~avG~NC~~gp~~~~~~l~~l~~~~~~p~~vyPNaG~p~~~~~~~~~~~~p~~~a~~~~~~~~~G---~ 266 (566)
T 1q7z_A 190 NFAITFDELDIDALGINCSLGPEEILPIFQELSQYTDKFLVVEPNAGKPIVENGKTVYPLKPHDFAVHIDSYYELG---V 266 (566)
T ss_dssp HHHHHHHTSSCSEEEEESSSCHHHHHHHHHHHHHTCCSEEEEECCSSSCEEETTEEECCCCHHHHHTTHHHHHHTT---C
T ss_pred HHHHHhhccCCCEEEEeCCCCHHHHHHHHHHHHhcCCCEEEEEcCCCCCcccCCccccCCCHHHHHHHHHHHHHcC---C
Confidence 2455566788887664222332 222222222333333 22 1112 478999999999988764 3
Q ss_pred eEEecCCCCCCCCcHHHHHHHHHHHHhh
Q 016596 357 HILNLGHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 357 ~Ils~gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
-|++ ||. +|.|+.|+++.++++.+
T Consensus 267 ~iiG-GCC---GTtP~hI~aia~~~~~~ 290 (566)
T 1q7z_A 267 NIFG-GCC---GTTPEHVKLFRKVLGNR 290 (566)
T ss_dssp SEEC-CCT---TCCHHHHHHHHHHHCSC
T ss_pred cEEc-ccc---CCCHHHHHHHHHHhcCC
Confidence 3555 443 57899999999988654
No 153
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=77.97 E-value=11 Score=34.95 Aligned_cols=83 Identities=10% Similarity=-0.006 Sum_probs=51.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC-
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV- 301 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~- 301 (386)
++++.+++.|++++++..+.+. .+|.+..++.+. ..++.+.. .+|++.|+.++.+ -+ ....+.|.
T Consensus 32 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpViaGvg~~~t~~ai~la~~A~~~Ga~ 104 (311)
T 3h5d_A 32 ALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFA----AVQKVVNG---RVPLIAGVGTNDTRDSIEFVKEVAEFGGF 104 (311)
T ss_dssp HHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHH----HHHHHSCS---SSCEEEECCCSSHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEeCCCcCHHHHHHHHHHHHhcCCC
Confidence 4445577899999998887764 689887776543 33444432 5799999877654 23 34456786
Q ss_pred CEEEcC----CCCCHHHHHHHh
Q 016596 302 DVVSLD----WTVDMAEGRRRL 319 (386)
Q Consensus 302 d~l~~d----~~~dl~e~~~~~ 319 (386)
|++.+- +..+-+++.+.|
T Consensus 105 davlv~~P~y~~~s~~~l~~~f 126 (311)
T 3h5d_A 105 AAGLAIVPYYNKPSQEGMYQHF 126 (311)
T ss_dssp SEEEEECCCSSCCCHHHHHHHH
T ss_pred cEEEEcCCCCCCCCHHHHHHHH
Confidence 876432 124555544444
No 154
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=77.47 E-value=12 Score=34.30 Aligned_cols=72 Identities=15% Similarity=0.252 Sum_probs=49.5
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++.+. ..++.+.. .+|++.++.++.+ -+ ....+.|
T Consensus 23 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---rvpviaGvg~~~t~~ai~la~~A~~~G 95 (294)
T 2ehh_A 23 LGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIE----FAVKRAAG---RIKVIAGTGGNATHEAVHLTAHAKEVG 95 (294)
T ss_dssp HHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEECCCSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 344556677899999998877764 699988777543 33444443 4789999887654 23 4446789
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 96 adavlv 101 (294)
T 2ehh_A 96 ADGALV 101 (294)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998743
No 155
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=77.32 E-value=38 Score=30.67 Aligned_cols=121 Identities=15% Similarity=0.195 Sum_probs=67.8
Q ss_pred HHHHHHHHHHhCCCEEEE--ecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEE
Q 016596 228 MAKYVQYQADNGAQAVQI--FDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVS 305 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i--~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~ 305 (386)
.+++++++.++|++.+-+ +.+-. ||.-|+.+....++.+.+..++. |.+++-=.. +...++.+.++ ++++-
T Consensus 54 a~~~a~~~k~~ga~~~k~~~~kprt---s~~~f~g~g~~gl~~l~~~~~~~--Gl~~~te~~-d~~~~~~l~~~-vd~~k 126 (276)
T 1vs1_A 54 VREAALAVKEAGAHMLRGGAFKPRT---SPYSFQGLGLEGLKLLRRAGDEA--GLPVVTEVL-DPRHVETVSRY-ADMLQ 126 (276)
T ss_dssp HHHHHHHHHHHTCSEEECBSSCCCS---STTSCCCCTHHHHHHHHHHHHHH--TCCEEEECC-CGGGHHHHHHH-CSEEE
T ss_pred HHHHHHHHHHhCCCEEEeEEEeCCC---ChhhhcCCCHHHHHHHHHHHHHc--CCcEEEecC-CHHHHHHHHHh-CCeEE
Confidence 345666777889997643 22211 22223333345566666777776 566433222 23346888888 89887
Q ss_pred cCCC--CCHHHHHH--HhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEec
Q 016596 306 LDWT--VDMAEGRR--RLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNL 361 (386)
Q Consensus 306 ~d~~--~dl~e~~~--~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~ 361 (386)
+... .+..-+++ .+|.-+.|-=|. .+|++|+...+..+...+ ....+|--
T Consensus 127 Igs~~~~n~~ll~~~a~~~kPV~lk~G~-----~~t~~ei~~Ave~i~~~G-n~~i~L~~ 180 (276)
T 1vs1_A 127 IGARNMQNFPLLREVGRSGKPVLLKRGF-----GNTVEELLAAAEYILLEG-NWQVVLVE 180 (276)
T ss_dssp ECGGGTTCHHHHHHHHHHTCCEEEECCT-----TCCHHHHHHHHHHHHHTT-CCCEEEEE
T ss_pred ECcccccCHHHHHHHHccCCeEEEcCCC-----CCCHHHHHHHHHHHHHcC-CCeEEEEe
Confidence 7532 34433332 344433332222 468899999988876653 34666654
No 156
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=77.25 E-value=14 Score=33.72 Aligned_cols=84 Identities=10% Similarity=0.114 Sum_probs=54.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHH---HHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLER---LALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~---l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.++.+ -++. ..+.|+
T Consensus 25 ~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~----~~~~~~~g---r~pviaGvg~~~t~~ai~la~~a~~~Ga 97 (292)
T 2ojp_A 25 KKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVM----MTLDLADG---RIPVIAGTGANATAEAISLTQRFNDSGI 97 (292)
T ss_dssp HHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---SSCEEEECCCSSHHHHHHHHHHTTTSSC
T ss_pred HHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHH----HHHHHhCC---CCcEEEecCCccHHHHHHHHHHHHhcCC
Confidence 34555677889999998887764 699988777543 34444443 4789999887654 2443 356799
Q ss_pred CEEEcC----CCCCHHHHHHHh
Q 016596 302 DVVSLD----WTVDMAEGRRRL 319 (386)
Q Consensus 302 d~l~~d----~~~dl~e~~~~~ 319 (386)
|++.+- +..+-+++.+.|
T Consensus 98 davlv~~P~y~~~s~~~l~~~f 119 (292)
T 2ojp_A 98 VGCLTVTPYYNRPSQEGLYQHF 119 (292)
T ss_dssp SEEEEECCCSSCCCHHHHHHHH
T ss_pred CEEEECCCCCCCCCHHHHHHHH
Confidence 977432 124555555544
No 157
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=76.94 E-value=28 Score=32.06 Aligned_cols=70 Identities=13% Similarity=0.167 Sum_probs=46.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hH---HHHHhcCCCE
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LL---ERLALTGVDV 303 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l---~~l~e~g~d~ 303 (386)
++++.+++.|++++++..+.+. .+|.+..++++. ..++.+.. .+|++.++.+++. -+ ....+.|+|+
T Consensus 37 ~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~----~~~~~~~g---rvpViaGvg~st~~ai~la~~A~~~Gada 109 (314)
T 3d0c_A 37 DNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVAT----RVTELVNG---RATVVAGIGYSVDTAIELGKSAIDSGADC 109 (314)
T ss_dssp HHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHH----HHHHHHTT---SSEEEEEECSSHHHHHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHH----HHHHHhCC---CCeEEecCCcCHHHHHHHHHHHHHcCCCE
Confidence 3445567899999998776664 699988877653 34444443 4799999877322 23 3445678887
Q ss_pred EEc
Q 016596 304 VSL 306 (386)
Q Consensus 304 l~~ 306 (386)
+.+
T Consensus 110 vlv 112 (314)
T 3d0c_A 110 VMI 112 (314)
T ss_dssp EEE
T ss_pred EEE
Confidence 744
No 158
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=76.70 E-value=27 Score=32.65 Aligned_cols=67 Identities=15% Similarity=0.050 Sum_probs=46.7
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|+++|++..+.+. .+|.+..++++.- .+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 51 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~-------~~~g---rvpViaGvg~~st~eai~la~~A~~~Gad 120 (344)
T 2hmc_A 51 RKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVER-------LVKA---GIPVIVGTGAVNTASAVAHAVHAQKVGAK 120 (344)
T ss_dssp HHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHH-------HHHT---TCCEEEECCCSSHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHH-------HhCC---CCcEEEecCCCCHHHHHHHHHHHHhcCCC
Confidence 3444567899999998777664 7999988877654 2332 5799999887653 23 444568999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 121 avlv 124 (344)
T 2hmc_A 121 GLMV 124 (344)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7744
No 159
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=76.62 E-value=35 Score=31.37 Aligned_cols=108 Identities=18% Similarity=0.195 Sum_probs=65.6
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||++.+++ ++ +-.++.++...++|+|++
T Consensus 68 ~~v~~~~v~~~~grvpViaGvg~--~t-----------------------------------~~ai~la~~A~~~Gadav 110 (316)
T 3e96_A 68 KEEVRRTVEYVHGRALVVAGIGY--AT-----------------------------------STAIELGNAAKAAGADAV 110 (316)
T ss_dssp HHHHHHHHHHHTTSSEEEEEECS--SH-----------------------------------HHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEEeCc--CH-----------------------------------HHHHHHHHHHHhcCCCEE
Confidence 44556666777778898877642 21 112345556678899999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-c--hHHHHHhcCCCEEEc-CCCCCHHHHHHH
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-G--LLERLALTGVDVVSL-DWTVDMAEGRRR 318 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~--~l~~l~e~g~d~l~~-d~~~dl~e~~~~ 318 (386)
.+.-|.....|++ =+.-|++++.++. +.|++++..|.. . .+..+.+.+ +++.+ +...|+....+.
T Consensus 111 lv~~P~y~~~s~~----~l~~~f~~va~a~-----~lPiilYn~g~~l~~~~~~~La~~p-nIvgiKdssgd~~~~~~~ 179 (316)
T 3e96_A 111 MIHMPIHPYVTAG----GVYAYFRDIIEAL-----DFPSLVYFKDPEISDRVLVDLAPLQ-NLVGVKYAINDLPRFAKV 179 (316)
T ss_dssp EECCCCCSCCCHH----HHHHHHHHHHHHH-----TSCEEEEECCTTSCTHHHHHHTTCT-TEEEEEECCCCHHHHHHH
T ss_pred EEcCCCCCCCCHH----HHHHHHHHHHHhC-----CCCEEEEeCCCCCCHHHHHHHHcCC-CEEEEEeCCCCHHHHHHH
Confidence 9876665444543 3555788888887 368887766542 2 245555554 56655 334566544443
No 160
>2y1h_A Putative deoxyribonuclease tatdn3; hydrolase; 2.50A {Homo sapiens}
Probab=76.27 E-value=31 Score=30.41 Aligned_cols=94 Identities=11% Similarity=0.055 Sum_probs=58.5
Q ss_pred HhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCC-C-EEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCC
Q 016596 260 EFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGV-D-VVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFG 336 (386)
Q Consensus 260 ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~-d-~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~g 336 (386)
+.-.+.+++.++.+++. +.|+++|+-.... .++.+.+.|. . +++... .+...+++.+...+-+ + +++...++
T Consensus 122 ~~q~~~f~~~~~la~~~--~lPv~iH~~~a~~~~~~il~~~~~~~~v~H~~~-g~~~~~~~~~~~g~~i-~-~~g~~~~~ 196 (272)
T 2y1h_A 122 EEQRQVLIRQIQLAKRL--NLPVNVHSRSAGRPTINLLQEQGAEKVLLHAFD-GRPSVAMEGVRAGYFF-S-IPPSIIRS 196 (272)
T ss_dssp HHHHHHHHHHHHHHHHH--TCCEEEECTTCHHHHHHHHHHTTCCSEEEETCC-SCHHHHHHHHHTTCEE-E-ECGGGGTC
T ss_pred HHHHHHHHHHHHHHHHh--CCcEEEEeCCcHHHHHHHHHhCCCCCEEEEccC-CCHHHHHHHHHCCCEE-E-ECCcccCc
Confidence 33456778888888887 6899999865544 4688888764 3 445533 3677776665433222 1 22222222
Q ss_pred CHHHHHHHHHHHHHHcCCCCeEEecCCC
Q 016596 337 SKDFITNRINDTVRKAGRWKHILNLGHG 364 (386)
Q Consensus 337 t~eev~~~v~~~i~~~~~~g~Ils~gc~ 364 (386)
+ .++++++.....++++++++.
T Consensus 197 --~----~~~~~~~~~~~drll~eTD~P 218 (272)
T 2y1h_A 197 --G----QKQKLVKQLPLTSICLETDSP 218 (272)
T ss_dssp --H----HHHHHHHHSCGGGEEECCCTT
T ss_pred --H----HHHHHHHhCCHHHEEEecCCC
Confidence 2 466777776656889999875
No 161
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=76.11 E-value=9.6 Score=35.50 Aligned_cols=84 Identities=19% Similarity=0.169 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCC---CcEEEEecCCcch-H-HHH--Hhc
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD---LSLILYASGSGGL-L-ERL--ALT 299 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~---~~~~~H~cG~~~~-l-~~l--~e~ 299 (386)
+..+.++.+.++|++.|.+.|..+ .+.|..+.+++ +.+++..++ .++-+|++-+... + ..+ .+.
T Consensus 152 ~~~~~~~~~~~~G~~~i~l~DT~G-~~~P~~v~~lv--------~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~a 222 (325)
T 3eeg_A 152 FLARMVEAVIEAGADVVNIPDTTG-YMLPWQYGERI--------KYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQN 222 (325)
T ss_dssp HHHHHHHHHHHHTCSEEECCBSSS-CCCHHHHHHHH--------HHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEecCccC-CcCHHHHHHHH--------HHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHh
Confidence 344455567788999999888776 47887766543 344443333 6788999887652 3 333 467
Q ss_pred CCCEEEc-----CC---CCCHHHHHHHh
Q 016596 300 GVDVVSL-----DW---TVDMAEGRRRL 319 (386)
Q Consensus 300 g~d~l~~-----d~---~~dl~e~~~~~ 319 (386)
|++.+.. .. ..+++++.-.+
T Consensus 223 Ga~~vd~tv~GlGer~GN~~lE~vv~~L 250 (325)
T 3eeg_A 223 GARQVECTINGIGERAGNTALEEVVMAM 250 (325)
T ss_dssp TCCEEEEBGGGCCSTTCCCBHHHHHHHH
T ss_pred CCCEEEEecccccccccchhHHHHHHHH
Confidence 9998843 22 25677665554
No 162
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=75.76 E-value=22 Score=35.59 Aligned_cols=144 Identities=13% Similarity=0.124 Sum_probs=82.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCc-----CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-----CCc----
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWA-----TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-----GSG---- 290 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~-----~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-----G~~---- 290 (386)
++-.++.++.+.++|.+.|=+.-+.. .+++++.|+. ++++.+.+ ++..+....- |..
T Consensus 46 tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~~d~~e~-----lr~l~~~~----~~~~l~~L~R~~N~~G~~~ypd 116 (539)
T 1rqb_A 46 MEDMVGACADIDAAGYWSVECWGGATYDSCIRFLNEDPWER-----LRTFRKLM----PNSRLQMLLRGQNLLGYRHYND 116 (539)
T ss_dssp GGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSCCCHHHH-----HHHHHHHC----TTSCEEEEECGGGTTSSSCCCH
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccccccchhccCCCHHHH-----HHHHHHhC----CCCEEEEEeccccccCcccCcc
Confidence 34445667778889999886654322 2456655543 33333333 2455555553 321
Q ss_pred ---c-hHHHHHhcCCCEEEcC-CCCCHH------HHHHHhCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeE
Q 016596 291 ---G-LLERLALTGVDVVSLD-WTVDMA------EGRRRLGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHI 358 (386)
Q Consensus 291 ---~-~l~~l~e~g~d~l~~d-~~~dl~------e~~~~~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~I 358 (386)
. .++...+.|++++.+- ...|+. +..+..|. .+.|.++...- ..+++.+.+.++++.+.+.. +
T Consensus 117 dv~~~~ve~a~~aGvd~vrIf~s~sd~~ni~~~i~~ak~~G~--~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad---~ 191 (539)
T 1rqb_A 117 EVVDRFVDKSAENGMDVFRVFDAMNDPRNMAHAMAAVKKAGK--HAQGTICYTISPVHTVEGYVKLAGQLLDMGAD---S 191 (539)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTC--EEEEEEECCCSTTCCHHHHHHHHHHHHHTTCS---E
T ss_pred cccHHHHHHHHhCCCCEEEEEEehhHHHHHHHHHHHHHHCCC--eEEEEEEeeeCCCCCHHHHHHHHHHHHHcCCC---E
Confidence 1 2577788999999763 333332 22233453 45566655443 56899999988888876423 4
Q ss_pred EecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 359 LNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 359 ls~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
++.. +.-.-..|..+..+++++++
T Consensus 192 I~L~-DT~G~~~P~~v~~lv~~l~~ 215 (539)
T 1rqb_A 192 IALK-DMAALLKPQPAYDIIKAIKD 215 (539)
T ss_dssp EEEE-ETTCCCCHHHHHHHHHHHHH
T ss_pred EEeC-CCCCCcCHHHHHHHHHHHHH
Confidence 4432 22233456667788877764
No 163
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=75.12 E-value=6.4 Score=37.30 Aligned_cols=108 Identities=16% Similarity=0.199 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCC-CCcEEEE
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHP-DLSLILY 285 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~-~~~~~~H 285 (386)
++.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++.- ..+..++++++++.-+ +.++.+-
T Consensus 153 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR-~r~~~eiv~aVr~avg~d~pV~vR 231 (363)
T 3l5l_A 153 IARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGGSFDNR-SRFLLETLAAVREVWPENLPLTAR 231 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHH-HHHHHHHHHHHHTTSCTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCcCHHHH-HHHHHHHHHHHHHHcCCCceEEEE
Confidence 444455555666677889999998864322 1344421 1111 3456778888877532 3466665
Q ss_pred ecCC-------cc------hHHHHHhcCCCEEEcCCC-------------CC---HHHHHHHhCCCeeEEecC
Q 016596 286 ASGS-------GG------LLERLALTGVDVVSLDWT-------------VD---MAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 286 ~cG~-------~~------~l~~l~e~g~d~l~~d~~-------------~d---l~e~~~~~g~~~~l~G~v 329 (386)
+..+ ++ +...+.+.|+|.+++... .+ .+.+++.++--+...|+|
T Consensus 232 is~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~GgI 304 (363)
T 3l5l_A 232 FGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSAWGF 304 (363)
T ss_dssp EEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEECSST
T ss_pred ecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEeCCC
Confidence 4321 11 246677889999876320 12 346677776555556665
No 164
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=75.05 E-value=14 Score=34.64 Aligned_cols=86 Identities=19% Similarity=0.335 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhC-CCCcEEEE
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTH-PDLSLILY 285 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~-~~~~~~~H 285 (386)
++.+.+-..+.++...++|.|+|-+.-.-+ .|+||.. ++. =..+..++++++++.- ++.|+.+-
T Consensus 147 I~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslen-R~r~~~eiv~aVR~avG~d~pV~vR 225 (349)
T 3hgj_A 147 MERILQAFVEGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLEN-RMRFPLQVAQAVREVVPRELPLFVR 225 (349)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHSCTTSCEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHH-HHHHHHHHHHHHHHHhcCCceEEEE
Confidence 444555555666677889999998864332 1445431 111 1234566777776653 24566665
Q ss_pred ecC-------Cc--c---hHHHHHhcCCCEEEcC
Q 016596 286 ASG-------SG--G---LLERLALTGVDVVSLD 307 (386)
Q Consensus 286 ~cG-------~~--~---~l~~l~e~g~d~l~~d 307 (386)
+.. .. . +...+.+.|+|.+++.
T Consensus 226 ls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 259 (349)
T 3hgj_A 226 VSATDWGEGGWSLEDTLAFARRLKELGVDLLDCS 259 (349)
T ss_dssp EESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred eccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 542 21 1 2466778899998764
No 165
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=74.78 E-value=16 Score=35.30 Aligned_cols=79 Identities=10% Similarity=0.069 Sum_probs=52.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCCCEE
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGVDVV 304 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~d~l 304 (386)
.+.++++.++|++.|.++|..+ ...|..+.+++ +.+++.. +.++-+|++.+... + ..+ .+.|++.+
T Consensus 183 ~~v~~~~~~~Ga~~i~l~DTvG-~~~P~~v~~lv--------~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~aGa~~v 252 (423)
T 3ivs_A 183 LSLYKAVDKIGVNRVGIADTVG-CATPRQVYDLI--------RTLRGVV-SCDIECHFHNDTGMAIANAYCALEAGATHI 252 (423)
T ss_dssp HHHHHHHHHHCCSEEEEEETTS-CCCHHHHHHHH--------HHHHHHC-SSEEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHhCCCccccCCccC-cCCHHHHHHHH--------HHHHhhc-CCeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 4555667788999999998876 56788776654 3333332 46889999988652 2 333 46899988
Q ss_pred Ec-----CC---CCCHHHHHH
Q 016596 305 SL-----DW---TVDMAEGRR 317 (386)
Q Consensus 305 ~~-----d~---~~dl~e~~~ 317 (386)
+. .+ ..+++++.-
T Consensus 253 d~ti~GlGERaGNa~Le~vv~ 273 (423)
T 3ivs_A 253 DTSILGIGERNGITPLGALLA 273 (423)
T ss_dssp EEBGGGCSSTTCBCBHHHHHH
T ss_pred EEecccccCcccchhHHHHHH
Confidence 53 22 257776654
No 166
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=73.73 E-value=76 Score=31.65 Aligned_cols=153 Identities=14% Similarity=0.147 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhC-----CCEEEEec----CCcCCCCHHHHHHhhHHHHHHHHHH-HHhhCCCCcEEEEecCCcc-hHH
Q 016596 226 TSMAKYVQYQADNG-----AQAVQIFD----SWATELSPVDFEEFSLPYLKQIVDT-VKQTHPDLSLILYASGSGG-LLE 294 (386)
Q Consensus 226 ~~~~~~~~~~~e~G-----~d~i~i~d----~~~~~iSp~~f~ef~~P~~k~l~~~-i~~~~~~~~~~~H~cG~~~-~l~ 294 (386)
+..++.++.+++.| ||.|-|+. |.+..+|++.=-+-+.|..+.+.+. ..+. .+++ +=++-... ..+
T Consensus 249 ~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~-~~vp--ISIDT~~a~Vae 325 (545)
T 2bmb_A 249 ESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQ-DKVI--LSIDTYRSNVAK 325 (545)
T ss_dssp HHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCG-GGEE--EEEECCCHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccC-CCCe--EEEeCCcHHHHH
Confidence 44556677799999 99999875 2345899877667778877776541 0011 0233 33433333 467
Q ss_pred HHHhcCCCEEE-cCC---CCCHHHHHHHh-CCCeeEEe--cCCcCc--c--CC---------------------------
Q 016596 295 RLALTGVDVVS-LDW---TVDMAEGRRRL-GPDVAVQG--NVDPGA--L--FG--------------------------- 336 (386)
Q Consensus 295 ~l~e~g~d~l~-~d~---~~dl~e~~~~~-g~~~~l~G--~vd~~~--l--~g--------------------------- 336 (386)
.-.+.|+++++ +.. ..++.++..++ |-.+++|= |.+..+ . +.
T Consensus 326 aAl~aGadIINDVsg~~~d~~m~~vva~~~~~~vVlmH~rG~p~tm~~~~~y~~~~~~~~~~~e~~~~~~~~~~~~~~~~ 405 (545)
T 2bmb_A 326 EAIKVGVDIINDISGGLFDSNMFAVIAENPEICYILSHTRGDISTMNRLAHYENFALGDSIQQEFVHNTDIQQLDDLKDK 405 (545)
T ss_dssp HHHHTTCCEEEETTTTSSCTTHHHHHHTCTTSEEEEECCCSCTTTGGGCCCCSSCTTTTTEEEEEETTEEGGGSTTHHHH
T ss_pred HHHHcCCCEEEeCCCCcCChHHHHHHHHhCCCeEEEECCCCCCCCccccccccccccccccchhcccccccccccccccc
Confidence 77788999996 432 34678888888 76666652 222211 1 22
Q ss_pred --CHHHHHHHHHHHHHHc---C--CCCeEEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 337 --SKDFITNRINDTVRKA---G--RWKHILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 337 --t~eev~~~v~~~i~~~---~--~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
=.++|.++..+.++.+ | ....||-||-+.. .+...|+ .+++..++
T Consensus 406 ~~vv~~v~~~l~~~i~~a~~~GI~~~~IilDPGiGF~-Kt~~~nl-~lL~~l~~ 457 (545)
T 2bmb_A 406 TVLIRNVGQEIGERYIKAIDNGVKRWQILIDPGLGFA-KTWKQNL-QIIRHIPI 457 (545)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSS-CCHHHHH-HHHHTHHH
T ss_pred chHHHHHHHHHHHHHHHHHHcCCCHHHEEEeCCCCcc-cChHHHH-HHHHHHHH
Confidence 1255555555555544 3 3479999999984 4566776 44444443
No 167
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=73.64 E-value=15 Score=32.66 Aligned_cols=125 Identities=12% Similarity=0.136 Sum_probs=71.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEE---
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVV--- 304 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l--- 304 (386)
+|++.+.++|+|.+.+..... +...+.++.+++. |....+=+...+. .++.+.+ .+|.+
T Consensus 100 ~~i~~~~~aGAd~itvH~Ea~-------------~~~~~~i~~ir~~--G~k~Gvalnp~Tp~e~l~~~l~-~vD~VlvM 163 (246)
T 3inp_A 100 ALIESFAKAGATSIVFHPEAS-------------EHIDRSLQLIKSF--GIQAGLALNPATGIDCLKYVES-NIDRVLIM 163 (246)
T ss_dssp HHHHHHHHHTCSEEEECGGGC-------------SCHHHHHHHHHTT--TSEEEEEECTTCCSGGGTTTGG-GCSEEEEE
T ss_pred HHHHHHHHcCCCEEEEccccc-------------hhHHHHHHHHHHc--CCeEEEEecCCCCHHHHHHHHh-cCCEEEEe
Confidence 467778899999998753221 1246788888887 4566666665554 3555544 35544
Q ss_pred EcCCC--------C---CHHHHHHHhC-----CCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCC
Q 016596 305 SLDWT--------V---DMAEGRRRLG-----PDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVG 368 (386)
Q Consensus 305 ~~d~~--------~---dl~e~~~~~g-----~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~ 368 (386)
+++.. . .++++++.++ -.+.+-|||++. .++++++.+ -..+|.+++- +..+
T Consensus 164 sV~PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGGI~~~-----------ti~~~~~aG-AD~~V~GSaI-f~a~ 230 (246)
T 3inp_A 164 SVNPGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGGVNPY-----------NIAEIAVCG-VNAFVAGSAI-FNSD 230 (246)
T ss_dssp CSCTTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESSCCTT-----------THHHHHTTT-CCEEEESHHH-HTSS
T ss_pred eecCCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECCcCHH-----------HHHHHHHcC-CCEEEEehHH-hCCC
Confidence 22211 1 2455555543 236789999863 234444433 2355555431 1123
Q ss_pred CcHHHHHHHHHHHHh
Q 016596 369 TPEENVAHFFEVAKA 383 (386)
Q Consensus 369 tp~Eni~a~~~a~~~ 383 (386)
-|.++++.+.++..+
T Consensus 231 dp~~~i~~l~~~i~~ 245 (246)
T 3inp_A 231 SYKQTIDKMRDELNK 245 (246)
T ss_dssp CHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhh
Confidence 467888888887765
No 168
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=73.61 E-value=52 Score=29.70 Aligned_cols=155 Identities=15% Similarity=0.026 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC----------------
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS---------------- 289 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~---------------- 289 (386)
+.+.+.++...+.|+..|.+.. .....+++.|+. +...++++.+.++++ |+.+.+|.+..
T Consensus 114 ~~~~~~i~~A~~lG~~~v~~~~-~~~~~~~~~~~~-~~~~l~~l~~~a~~~--Gv~l~lEn~~~~~~~~~~~~~~~~~~~ 189 (305)
T 3obe_A 114 EFWKKATDIHAELGVSCMVQPS-LPRIENEDDAKV-VSEIFNRAGEITKKA--GILWGYHNHSNEFKRVLKAGEKPEQNP 189 (305)
T ss_dssp HHHHHHHHHHHHHTCSEEEECC-CCCCSSHHHHHH-HHHHHHHHHHHHHTT--TCEEEEECCSGGGSEECCTTCCCC---
T ss_pred HHHHHHHHHHHHcCCCEEEeCC-CCCCCCHHHHHH-HHHHHHHHHHHHHHc--CCEEEEecCcccccccccccccccccc
Confidence 3445556666778999988642 122356777754 567899999999987 68888887643
Q ss_pred -------cc-hHHHHH-hcCCC--EEEcC------CCCCHHHHHHHhCCCeeEEecCCcCccCC-CHHHHHHHHHHHHHH
Q 016596 290 -------GG-LLERLA-LTGVD--VVSLD------WTVDMAEGRRRLGPDVAVQGNVDPGALFG-SKDFITNRINDTVRK 351 (386)
Q Consensus 290 -------~~-~l~~l~-e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l~G~vd~~~l~g-t~eev~~~v~~~i~~ 351 (386)
.. .++.+. +.+.+ .+.+| ...|+.+..+++++++..+=-=| ....| +-+-=-+.+.+.++.
T Consensus 190 ~~~~~~~~~~~~~~l~~~~~~~~vg~~lD~~H~~~~g~d~~~~i~~~~~ri~~vHlkD-~~~~G~~G~id~~~i~~~L~~ 268 (305)
T 3obe_A 190 NPWAPPKGTYIEELFLKNTDPDKVMFELDVYWAVMGQQDPVEWMENYPNRFKLLHIKD-RWIIGDSGMMNFPNIFKKAYE 268 (305)
T ss_dssp -----CCSEEHHHHHHHHSCTTTEEEEEEHHHHHHTTCCHHHHHHHSTTTEEEEEECC-SSSTTCSSSBCHHHHHHHHHH
T ss_pred cccccCCChHHHHHHHHhCCcccEEEEEeHHHHHHcCCCHHHHHHHhhCceeEEEecc-CcCCCCCCccCHHHHHHHHHH
Confidence 11 255554 45544 23343 23589999999998755432112 11134 211113444556666
Q ss_pred cCCCCeEEecCCCCC-CCCcHHHHHHHHHHHHhhcC
Q 016596 352 AGRWKHILNLGHGIK-VGTPEENVAHFFEVAKAIRY 386 (386)
Q Consensus 352 ~~~~g~Ils~gc~i~-~~tp~Eni~a~~~a~~~yg~ 386 (386)
.+-.|+|+=... .| .+.|.+.++.-++..+++||
T Consensus 269 ~gy~G~iiE~~~-~~~~~~~~~~~~~s~~~L~~~~~ 303 (305)
T 3obe_A 269 IGILGYYVELEG-DKKGRTQFEGVEKSAAYLQAAPF 303 (305)
T ss_dssp HTCCEEEECCCC-CSSSCCHHHHHHHHHHHHHHCTT
T ss_pred cCCCEEEEEecC-CcCCCCHHHHHHHHHHHHHHcCC
Confidence 663457654332 22 35589999999999999886
No 169
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=73.38 E-value=19 Score=33.99 Aligned_cols=83 Identities=13% Similarity=0.041 Sum_probs=53.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
+.++.+++.|++++++..+.+. .+|.+..++.+. ..++.+.. .+|++.++.++.+ -+ ....+.|+|
T Consensus 84 ~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~----~~ve~~~g---rvpViaGvg~~st~eai~la~~A~~~Gad 156 (360)
T 4dpp_A 84 DLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIG----HTVNCFGG---SIKVIGNTGSNSTREAIHATEQGFAVGMH 156 (360)
T ss_dssp HHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHH----HHHHHHTT---TSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHH----HHHHHhCC---CCeEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 3344567899999998877764 799988777554 34444432 4788888876653 23 445578999
Q ss_pred EEEcC----CCCCHHHHHHHh
Q 016596 303 VVSLD----WTVDMAEGRRRL 319 (386)
Q Consensus 303 ~l~~d----~~~dl~e~~~~~ 319 (386)
++.+- ...+-+++.+.|
T Consensus 157 avlvv~PyY~k~sq~gl~~hf 177 (360)
T 4dpp_A 157 AALHINPYYGKTSIEGLIAHF 177 (360)
T ss_dssp EEEEECCCSSCCCHHHHHHHH
T ss_pred EEEEcCCCCCCCCHHHHHHHH
Confidence 77432 124555555544
No 170
>3fok_A Uncharacterized protein CGL0159; CGL0159 ,brevibacterium flavum., structural genomics, PSI-2, protein structure initiative; 2.50A {Corynebacterium glutamicum}
Probab=73.12 E-value=56 Score=30.00 Aligned_cols=138 Identities=14% Similarity=0.090 Sum_probs=80.1
Q ss_pred HHHHHHhCCCEEEEe--cCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEE--e----cCCcc--h-HH------
Q 016596 232 VQYQADNGAQAVQIF--DSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILY--A----SGSGG--L-LE------ 294 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~--d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H--~----cG~~~--~-l~------ 294 (386)
++..++.|+|++-+. -..++--..+++ ..+.++.+.++++ |.|++++ . .|... . .+
T Consensus 134 Ve~AvrlGADaV~~l~~i~~Gs~~e~~~l-----~~la~vv~ea~~~--GlP~~~ep~~y~r~gg~v~~~~dp~~Va~aa 206 (307)
T 3fok_A 134 VSSMVDRGVDFAKTLVRINLSDAGTAPTL-----EATAHAVNEAAAA--QLPIMLEPFMSNWVNGKVVNDLSTDAVIQSV 206 (307)
T ss_dssp HHHHHHHTCCEEEEEEEECTTCTTHHHHH-----HHHHHHHHHHHHT--TCCEEEEEEEEEEETTEEEECCSHHHHHHHH
T ss_pred HHHHHHCCCCEEEEEEEECCCChhHHHHH-----HHHHHHHHHHHHc--CCcEEEEeeccccCCCCcCCCCCHHHHHHHH
Confidence 344567799997632 222322223444 4567899999997 6898886 3 23211 1 22
Q ss_pred -HHHhcCCC----EEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCC--
Q 016596 295 -RLALTGVD----VVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKV-- 367 (386)
Q Consensus 295 -~l~e~g~d----~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~-- 367 (386)
.-.++|+| ++-+.+.-+++++.+...-.+.+.||=. .++++++.+.+++.++..|..|.++ |=++..
T Consensus 207 RiAaELGADs~~tivK~~y~e~f~~Vv~a~~vPVViaGG~k----~~~~~e~L~~v~~A~~~aGa~Gv~v--GRNIfQ~~ 280 (307)
T 3fok_A 207 AIAAGLGNDSSYTWMKLPVVEEMERVMESTTMPTLLLGGEG----GNDPDATFASWEHALTLPGVRGLTV--GRTLLYPQ 280 (307)
T ss_dssp HHHHTCSSCCSSEEEEEECCTTHHHHGGGCSSCEEEECCSC----C--CHHHHHHHHHHTTSTTEEEEEE--CTTTSSCS
T ss_pred HHHHHhCCCcCCCEEEeCCcHHHHHHHHhCCCCEEEeCCCC----CCCHHHHHHHHHHHHHhCCCeEEee--chhhccCC
Confidence 22578999 8877665567666665544455555421 1367899999999999544345555 555533
Q ss_pred -CCcHHHHHHHHHHHH
Q 016596 368 -GTPEENVAHFFEVAK 382 (386)
Q Consensus 368 -~tp~Eni~a~~~a~~ 382 (386)
+-|..-++++...+|
T Consensus 281 ~~dp~~~v~al~~iVH 296 (307)
T 3fok_A 281 DGDVAAAVDTAARLVH 296 (307)
T ss_dssp SSCHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHH
Confidence 344444555544443
No 171
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=73.02 E-value=23 Score=34.65 Aligned_cols=143 Identities=13% Similarity=0.144 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCc-----CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-----CCc-----
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWA-----TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-----GSG----- 290 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~-----~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-----G~~----- 290 (386)
+-.++.++.+.++|.+.|=+.-+.. .+++++.|+. ++++.+.+ ++..+...+. |..
T Consensus 30 ~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~~d~~e~-----l~~i~~~~----~~~~l~~l~R~~N~~G~~~~~dd 100 (464)
T 2nx9_A 30 DDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLGEDPWQR-----LRLLKQAM----PNTPLQMLLRGQNLLGYRHYADD 100 (464)
T ss_dssp GGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTCCCHHHH-----HHHHHHHC----SSSCEEEEECGGGTTSSSCCCHH
T ss_pred HHHHHHHHHHHHcCCCEEEeCcCccccchhhccCCCHHHH-----HHHHHHhC----CCCeEEEEeccccccCcccccch
Confidence 3344556677788999876643321 2456655543 23333332 2455555654 321
Q ss_pred --c-hHHHHHhcCCCEEEcC-CCCCHHH------HHHHhCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEE
Q 016596 291 --G-LLERLALTGVDVVSLD-WTVDMAE------GRRRLGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHIL 359 (386)
Q Consensus 291 --~-~l~~l~e~g~d~l~~d-~~~dl~e------~~~~~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Il 359 (386)
. .++...+.|++++.+- ...|+.. ..+..|. .+.+.+....- ..+++.+.+.++++.+.+.. ++
T Consensus 101 v~~~~v~~a~~~Gvd~i~if~~~sd~~ni~~~i~~ak~~G~--~v~~~i~~~~~~~~~~e~~~~~a~~l~~~Gad---~I 175 (464)
T 2nx9_A 101 VVDTFVERAVKNGMDVFRVFDAMNDVRNMQQALQAVKKMGA--HAQGTLCYTTSPVHNLQTWVDVAQQLAELGVD---SI 175 (464)
T ss_dssp HHHHHHHHHHHTTCCEEEECCTTCCTHHHHHHHHHHHHTTC--EEEEEEECCCCTTCCHHHHHHHHHHHHHTTCS---EE
T ss_pred hhHHHHHHHHhCCcCEEEEEEecCHHHHHHHHHHHHHHCCC--EEEEEEEeeeCCCCCHHHHHHHHHHHHHCCCC---EE
Confidence 1 2566778999999763 3333322 2233453 45566633322 45889999988888776423 34
Q ss_pred ecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 360 NLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 360 s~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
+. |+...-..|+.+..+++++++
T Consensus 176 ~l-~DT~G~~~P~~v~~lv~~l~~ 198 (464)
T 2nx9_A 176 AL-KDMAGILTPYAAEELVSTLKK 198 (464)
T ss_dssp EE-EETTSCCCHHHHHHHHHHHHH
T ss_pred EE-cCCCCCcCHHHHHHHHHHHHH
Confidence 33 233334457778888888775
No 172
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=72.85 E-value=19 Score=33.21 Aligned_cols=70 Identities=14% Similarity=0.264 Sum_probs=47.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~ 301 (386)
.++++.+++.|++++++..+.+. .+|.+..++++. ..++.+ . .+|++.++.++.+ -+ ....+.|+
T Consensus 32 ~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~----~~v~~~-g---rvpViaGvg~~~t~~ai~la~~A~~~Ga 103 (313)
T 3dz1_A 32 DRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVAT----RFIKRA-K---SMQVIVGVSAPGFAAMRRLARLSMDAGA 103 (313)
T ss_dssp HHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHH----HHHHHC-T---TSEEEEECCCSSHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHH----HHHHHc-C---CCcEEEecCCCCHHHHHHHHHHHHHcCC
Confidence 34445567899999998877764 799888777554 334444 2 4799998876653 23 45567899
Q ss_pred CEEEc
Q 016596 302 DVVSL 306 (386)
Q Consensus 302 d~l~~ 306 (386)
|++.+
T Consensus 104 davlv 108 (313)
T 3dz1_A 104 AGVMI 108 (313)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 98754
No 173
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=72.79 E-value=35 Score=31.37 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=37.2
Q ss_pred HhCCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEE--EcCC
Q 016596 237 DNGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVV--SLDW 308 (386)
Q Consensus 237 e~G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l--~~d~ 308 (386)
+.|+..|.+.. +. ++.++ +.++++.+++.++...+.+.+.|... .++.+.+.|++.+ ++|.
T Consensus 64 ~~g~~~i~~tG--GEPll~~~---------l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~iSld~ 129 (340)
T 1tv8_A 64 ELGVKKIRITG--GEPLMRRD---------LDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDA 129 (340)
T ss_dssp HTTCCEEEEES--SCGGGSTT---------HHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCC
T ss_pred HCCCCEEEEeC--CCccchhh---------HHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEEEecCC
Confidence 56888777643 21 44432 35677788776311145667777653 4678888898866 4553
No 174
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=72.57 E-value=17 Score=31.94 Aligned_cols=126 Identities=13% Similarity=0.128 Sum_probs=70.5
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEE--
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVS-- 305 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~-- 305 (386)
+|++.+.++|||.+.+.--. + -+...++++.++++ |....+=++-.+. .+..+.+ ++|.+-
T Consensus 71 ~~i~~~~~aGAd~itvh~Ea-----------~-~~~~~~~i~~i~~~--G~k~gv~lnp~tp~~~~~~~l~-~~D~Vlvm 135 (231)
T 3ctl_A 71 DYIAQLARAGADFITLHPET-----------I-NGQAFRLIDEIRRH--DMKVGLILNPETPVEAMKYYIH-KADKITVM 135 (231)
T ss_dssp GTHHHHHHHTCSEEEECGGG-----------C-TTTHHHHHHHHHHT--TCEEEEEECTTCCGGGGTTTGG-GCSEEEEE
T ss_pred HHHHHHHHcCCCEEEECccc-----------C-CccHHHHHHHHHHc--CCeEEEEEECCCcHHHHHHHHh-cCCEEEEe
Confidence 36677889999998874211 0 13456888999987 4565665554443 3444444 466542
Q ss_pred -cCCC------C-----CHHHHHHHhC-----CCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEe-cCCCCCC
Q 016596 306 -LDWT------V-----DMAEGRRRLG-----PDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILN-LGHGIKV 367 (386)
Q Consensus 306 -~d~~------~-----dl~e~~~~~g-----~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils-~gc~i~~ 367 (386)
++.. . .++++++... -.+.+-|||++.. ++++++.+ -..+|.+ ++--=.+
T Consensus 136 sV~pGfggQ~f~~~~l~kI~~lr~~~~~~~~~~~I~VdGGI~~~~-----------~~~~~~aG-Ad~~V~G~saif~~~ 203 (231)
T 3ctl_A 136 TVDPGFAGQPFIPEMLDKLAELKAWREREGLEYEIEVDGSCNQAT-----------YEKLMAAG-ADVFIVGTSGLFNHA 203 (231)
T ss_dssp SSCTTCSSCCCCTTHHHHHHHHHHHHHHHTCCCEEEEESCCSTTT-----------HHHHHHHT-CCEEEECTTTTGGGC
T ss_pred eeccCcCCccccHHHHHHHHHHHHHHhccCCCceEEEECCcCHHH-----------HHHHHHcC-CCEEEEccHHHhCCC
Confidence 3221 1 2356666652 2366789997632 23344443 2366666 4311122
Q ss_pred CCcHHHHHHHHHHHH
Q 016596 368 GTPEENVAHFFEVAK 382 (386)
Q Consensus 368 ~tp~Eni~a~~~a~~ 382 (386)
+.|.++++.+.++.+
T Consensus 204 d~~~~~~~~l~~~~~ 218 (231)
T 3ctl_A 204 ENIDEAWRIMTAQIL 218 (231)
T ss_dssp SSHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHH
Confidence 337788888876554
No 175
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=71.77 E-value=24 Score=31.57 Aligned_cols=78 Identities=17% Similarity=0.255 Sum_probs=44.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhh---------HHHHHHHHHHHHhhCCCCcEEEEecCC-------cc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFS---------LPYLKQIVDTVKQTHPDLSLILYASGS-------GG 291 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~---------~P~~k~l~~~i~~~~~~~~~~~H~cG~-------~~ 291 (386)
.+.++.+.++|+|.|-+.-|... ++....-.+-. ....-++++.+++.+.+.|+++-..-| ..
T Consensus 34 ~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~~g~~~ 113 (268)
T 1qop_A 34 LKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFNNGIDA 113 (268)
T ss_dssp HHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHTTCHHH
T ss_pred HHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHHhhHHH
Confidence 46777888999999988655542 23322222111 122335666676652246755432112 12
Q ss_pred hHHHHHhcCCCEEEc
Q 016596 292 LLERLALTGVDVVSL 306 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~ 306 (386)
+++.+.+.|+|.+.+
T Consensus 114 ~~~~~~~aGadgii~ 128 (268)
T 1qop_A 114 FYARCEQVGVDSVLV 128 (268)
T ss_dssp HHHHHHHHTCCEEEE
T ss_pred HHHHHHHcCCCEEEE
Confidence 467788899996654
No 176
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=71.63 E-value=39 Score=30.57 Aligned_cols=96 Identities=18% Similarity=0.209 Sum_probs=55.7
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCC-CCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCcchHHHHHhcC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATE-LSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSGGLLERLALTG 300 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~-iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~~~l~~l~e~g 300 (386)
+-.++.++...++|+|++.+.-|...- .|+ +=+.-|++.+.++. +.|++++.. |...-.+.+.+.
T Consensus 77 ~~ai~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~~- 146 (286)
T 2r91_A 77 DEAIALAKYAESRGAEAVASLPPYYFPRLSE----RQIAKYFRDLCSAV-----SIPVFLYNYPAAVGRDVDARAAKEL- 146 (286)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCSCSSTTCCH----HHHHHHHHHHHHHC-----SSCEEEEECHHHHSSCCCHHHHHHH-
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCcCCCCCCH----HHHHHHHHHHHHhc-----CCCEEEEeChhhcCCCCCHHHHHhc-
Confidence 334466677778999999887666443 454 33455777777765 468888764 322124555553
Q ss_pred CCEEEc-CCCCCHHHHHHH--hCCCeeEEecCCc
Q 016596 301 VDVVSL-DWTVDMAEGRRR--LGPDVAVQGNVDP 331 (386)
Q Consensus 301 ~d~l~~-d~~~dl~e~~~~--~g~~~~l~G~vd~ 331 (386)
.+++.+ +...|+....+. .+++..+..|-|.
T Consensus 147 pnivgiKds~gd~~~~~~~~~~~~~f~v~~G~d~ 180 (286)
T 2r91_A 147 GCIRGVKDTNESLAHTLAYKRYLPQARVYNGSDS 180 (286)
T ss_dssp SCEEEEEECCSCHHHHHHHHHHCTTSEEEECCGG
T ss_pred CCEEEEEeCCCCHHHHHHHHhcCCCEEEEEccHH
Confidence 355555 344565544332 4656666555553
No 177
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=71.51 E-value=40 Score=31.66 Aligned_cols=139 Identities=13% Similarity=0.125 Sum_probs=81.7
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+++.++.+.++|+|.|-+.-+. .+. .+.+..+++.. .+|++.-++=+....-.-++.|+|.+.+
T Consensus 47 atv~Qi~~l~~aG~diVRvavp~-----~~~---------a~al~~I~~~~-~vPlvaDiHf~~~lal~a~e~G~dklRI 111 (366)
T 3noy_A 47 ATLNQIKRLYEAGCEIVRVAVPH-----KED---------VEALEEIVKKS-PMPVIADIHFAPSYAFLSMEKGVHGIRI 111 (366)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCS-----HHH---------HHHHHHHHHHC-SSCEEEECCSCHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEeCCCC-----hHH---------HHHHHHHHhcC-CCCEEEeCCCCHHHHHHHHHhCCCeEEE
Confidence 34455667889999998875442 222 24444554443 5788776655555444567889999876
Q ss_pred CCC--C------CHHHHHHHhCCCeeE---EecCCcCcc--C--CCHHHHHHHHHHHHHHc---CCCCeEEecCCCCCCC
Q 016596 307 DWT--V------DMAEGRRRLGPDVAV---QGNVDPGAL--F--GSKDFITNRINDTVRKA---GRWKHILNLGHGIKVG 368 (386)
Q Consensus 307 d~~--~------dl~e~~~~~g~~~~l---~G~vd~~~l--~--gt~eev~~~v~~~i~~~---~~~g~Ils~gc~i~~~ 368 (386)
++. . .+-++.+..+--+.| +|.++...+ + -|||...+.+.+.++.+ +=..+++|.=. .
T Consensus 112 NPGNig~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~gf~~iviS~K~----S 187 (366)
T 3noy_A 112 NPGNIGKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWGFTNYKVSIKG----S 187 (366)
T ss_dssp CHHHHSCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCEEEEEEC----S
T ss_pred CCcccCchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCCCCeEEEeeec----C
Confidence 542 1 233444445433333 455666555 3 48888877776665554 32467776422 2
Q ss_pred CcHHHHHHHHHHHHhh
Q 016596 369 TPEENVAHFFEVAKAI 384 (386)
Q Consensus 369 tp~Eni~a~~~a~~~y 384 (386)
-..+.+.|....++++
T Consensus 188 ~v~~~i~ayr~la~~~ 203 (366)
T 3noy_A 188 DVLQNVRANLIFAERT 203 (366)
T ss_dssp SHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHhcc
Confidence 2455666666666553
No 178
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=71.50 E-value=53 Score=29.87 Aligned_cols=112 Identities=11% Similarity=0.170 Sum_probs=58.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHh-hHHHHHHHHHHHHh-hCCCCcEEEEec-CCcc-hHHHHHhcCCCEEE
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEF-SLPYLKQIVDTVKQ-THPDLSLILYAS-GSGG-LLERLALTGVDVVS 305 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef-~~P~~k~l~~~i~~-~~~~~~~~~H~c-G~~~-~l~~l~e~g~d~l~ 305 (386)
..+++..+.+..+|.-. |+...+-+ ...++..++..+.+ ...++|+.+|.+ |... .+..-++.|+..+.
T Consensus 36 avi~AAee~~sPvIlq~-------s~~~~~~~~g~~~~~~~v~~~A~~~~~~VPValHlDHg~~~e~i~~ai~~GFtSVM 108 (288)
T 3q94_A 36 AILAAAEEEKSPVILGV-------SEGAARHMTGFKTVVAMVKALIEEMNITVPVAIHLDHGSSFEKCKEAIDAGFTSVM 108 (288)
T ss_dssp HHHHHHHHTTCCEEEEE-------EHHHHHHTSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhCCCEEEEC-------ChhhhhhcCCHHHHHHHHHHHHHhcCCCCcEEEECCCCCCHHHHHHHHHcCCCeEE
Confidence 34445566778876532 22221110 12233344433332 112689999986 4332 46667788999998
Q ss_pred cCCC-C----CHHHHHHHh----CCCeeEE------ecCC----c-CccCCCHHHHHHHHHHH
Q 016596 306 LDWT-V----DMAEGRRRL----GPDVAVQ------GNVD----P-GALFGSKDFITNRINDT 348 (386)
Q Consensus 306 ~d~~-~----dl~e~~~~~----g~~~~l~------G~vd----~-~~l~gt~eev~~~v~~~ 348 (386)
+|.. . +++..++.. ...+++= ||.. . ..++-+|||+.+.+++.
T Consensus 109 iDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~T 171 (288)
T 3q94_A 109 IDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEAT 171 (288)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHH
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHH
Confidence 8854 2 333333322 1123331 2221 1 12478899999988754
No 179
>1bf6_A Phosphotriesterase homology protein; hypothetical protein; 1.70A {Escherichia coli} SCOP: c.1.9.3
Probab=71.26 E-value=54 Score=28.89 Aligned_cols=97 Identities=14% Similarity=0.062 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEecC-C-c-chHHHHHhcCCC----EE-EcCCCCCHHHHHHHh--CCCeeEEecCCcCc
Q 016596 264 PYLKQIVDTVKQTHPDLSLILYASG-S-G-GLLERLALTGVD----VV-SLDWTVDMAEGRRRL--GPDVAVQGNVDPGA 333 (386)
Q Consensus 264 P~~k~l~~~i~~~~~~~~~~~H~cG-~-~-~~l~~l~e~g~d----~l-~~d~~~dl~e~~~~~--g~~~~l~G~vd~~~ 333 (386)
..++++++.+++. |+|+++|+.. . . ..++.+.+.|++ ++ ++....+.+.+++.. |-.+.+-|. . .
T Consensus 138 ~~~~~~~~~a~~~--~~pv~iH~~~~~~~~~~~~~l~~~~~~~~~~~i~H~~~~~~~~~~~~~~~~G~~i~~~~~-~--~ 212 (291)
T 1bf6_A 138 KVFIAAALAHNQT--GRPISTHTSFSTMGLEQLALLQAHGVDLSRVTVGHCDLKDNLDNILKMIDLGAYVQFDTI-G--K 212 (291)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECGGGCSHHHHHHHHHHTTCCGGGEEECCCCSSCCHHHHHHHHHTTCEEEECCT-T--C
T ss_pred HHHHHHHHHHHHH--CCeEEEeCCCCCChHHHHHHHHHcCCCchhEEEECCCCCCCHHHHHHHHHCCCEEEEccC-c--c
Confidence 3456677777777 6899999842 1 1 246777777764 22 554445777776654 433333332 1 0
Q ss_pred c-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 334 L-FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 334 l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
. ..+.+.-.+.++++++...-..+++++++..
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~dril~~TD~p~ 245 (291)
T 1bf6_A 213 NSYYPDEKRIAMLHALRDRGLLNRVMLSMDITR 245 (291)
T ss_dssp TTTSCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred cCCCCHHHHHHHHHHHHHhCCCCeEEEcCCCCC
Confidence 1 1223344556777777665458888888753
No 180
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=70.99 E-value=21 Score=33.30 Aligned_cols=84 Identities=20% Similarity=0.259 Sum_probs=51.3
Q ss_pred HHHHHHHhCCCEEEEecCCc----------CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcC
Q 016596 231 YVQYQADNGAQAVQIFDSWA----------TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTG 300 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~----------~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g 300 (386)
.++.+.+.|++.+-+..+.+ ..++++. ++++++.+++. |.++.+|+.|... ++...+.|
T Consensus 172 ~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~--------l~~~~~~A~~~--g~~v~~H~~~~~~-i~~~~~~g 240 (403)
T 3gnh_A 172 AVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEE--------MKAVVDEAHMA--GIKVAAHAHGASG-IREAVRAG 240 (403)
T ss_dssp HHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHH--------HHHHHHHHHHT--TCEEEEEECSHHH-HHHHHHTT
T ss_pred HHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHH--------HHHHHHHHHHC--CCEEEEEeCCHHH-HHHHHHhC
Confidence 34456677999887653211 1455554 46788888887 6899999977643 56677889
Q ss_pred CCEEEcCCCCCHHHHHHHhCCCeeE
Q 016596 301 VDVVSLDWTVDMAEGRRRLGPDVAV 325 (386)
Q Consensus 301 ~d~l~~d~~~dl~e~~~~~g~~~~l 325 (386)
++.+.=....+-+.++......+.+
T Consensus 241 ~~~i~H~~~~~~~~~~~~~~~g~~~ 265 (403)
T 3gnh_A 241 VDTIEHASLVDDEGIKLAVQKGAYF 265 (403)
T ss_dssp CSEEEECTTCCHHHHHHHHHHTCEE
T ss_pred CCEEecCCcCCHHHHHHHHHCCCEE
Confidence 8876322234544444433323444
No 181
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=70.92 E-value=49 Score=28.25 Aligned_cols=82 Identities=15% Similarity=0.163 Sum_probs=47.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW 308 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~ 308 (386)
.+.++++.+.|++.|.+.+...+ +..+.. +....+++-+..+.. +++++++ ..++...++|++.+++..
T Consensus 34 ~~~~~~~~~~G~~~i~l~~~~~~---~~~~~~-~~~~~~~l~~~~~~~--~v~v~v~-----~~~~~a~~~gad~v~l~~ 102 (227)
T 2tps_A 34 VTVVQKALKGGATLYQFREKGGD---ALTGEA-RIKFAEKAQAACREA--GVPFIVN-----DDVELALNLKADGIHIGQ 102 (227)
T ss_dssp HHHHHHHHHHTCSEEEECCCSTT---CCCHHH-HHHHHHHHHHHHHHH--TCCEEEE-----SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHCCCCEEEEecCCCC---HhHHHH-HHHHHHHHHHHHHHc--CCeEEEc-----CHHHHHHHcCCCEEEECC
Confidence 35566778899999987654432 322210 122222222223333 4566664 346778888999888743
Q ss_pred C-CCHHHHHHHhCC
Q 016596 309 T-VDMAEGRRRLGP 321 (386)
Q Consensus 309 ~-~dl~e~~~~~g~ 321 (386)
. .++.++++.+|.
T Consensus 103 ~~~~~~~~~~~~g~ 116 (227)
T 2tps_A 103 EDANAKEVRAAIGD 116 (227)
T ss_dssp TSSCHHHHHHHHTT
T ss_pred CccCHHHHHHhcCC
Confidence 2 457777777764
No 182
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=70.90 E-value=44 Score=31.07 Aligned_cols=98 Identities=15% Similarity=0.195 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhhCCCCcEEEEec-CCc--chHHHHHhcCCC---E-E-EcCCCCCHHHHHHHhC--CCeeEEecCCcCcc
Q 016596 265 YLKQIVDTVKQTHPDLSLILYAS-GSG--GLLERLALTGVD---V-V-SLDWTVDMAEGRRRLG--PDVAVQGNVDPGAL 334 (386)
Q Consensus 265 ~~k~l~~~i~~~~~~~~~~~H~c-G~~--~~l~~l~e~g~d---~-l-~~d~~~dl~e~~~~~g--~~~~l~G~vd~~~l 334 (386)
.++..++..++. +.|+++|+. |.. ..++.+.+.|++ + + +.+...|++++++.+. ..+.+-| +-....
T Consensus 174 ~f~aq~~lA~~~--glPViiH~~~gr~a~~~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l~~G~~i~~~g-~~t~~~ 250 (339)
T 3gtx_A 174 FFRAAARVQRET--GVPIITHTQEGQQGPQQAELLTSLGADPARIMIGHMDGNTDPAYHRETLRHGVSIAFDR-IGLQGM 250 (339)
T ss_dssp HHHHHHHHHHHH--CCCEEEECSTTCCHHHHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHHTTTCEEEECC-TTCCSS
T ss_pred HHHHHHHHHHHH--CCeEEEeCCCCcCHHHHHHHHHHcCCCcccEEEEccCCCCCHHHHHHHHHcCcEEEEcc-Cccccc
Confidence 344556666665 689999983 222 246778887765 2 2 5554468888888764 3333333 211112
Q ss_pred CC--CHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 335 FG--SKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 335 ~g--t~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
.+ +...-.+.++++++.+...+++|++++.-
T Consensus 251 ~~~p~~~~~~~~l~~li~~~~~drilleTD~p~ 283 (339)
T 3gtx_A 251 VGTPTDAERLSVLTTLLGEGYADRLLLSHDSIW 283 (339)
T ss_dssp TTCCCHHHHHHHHHHHHHTTCGGGEEECCCCEE
T ss_pred cCCCchHHHHHHHHHHHHhcCCCeEEEecCCCc
Confidence 22 22245567788888766568999998763
No 183
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=70.81 E-value=59 Score=32.01 Aligned_cols=67 Identities=19% Similarity=0.207 Sum_probs=41.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.++.++++|+|+|.+.-..+. + ....++++.+++..++.|++...+.+......+.+.|+|.+.+
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~G~---~--------~~~~~~i~~i~~~~~~~pvi~~~v~t~~~a~~l~~aGad~I~v 323 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQGN---S--------VYQIAMVHYIKQKYPHLQVIGGNVVTAAQAKNLIDAGVDGLRV 323 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSCCC---S--------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEeeccCCc---c--------hhHHHHHHHHHHhCCCCceEecccchHHHHHHHHHcCCCEEEE
Confidence 35566678899999887332221 1 2334556666665445677665443333467788999998855
No 184
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=70.02 E-value=48 Score=28.33 Aligned_cols=124 Identities=19% Similarity=0.132 Sum_probs=65.9
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC-
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT- 309 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~- 309 (386)
.++...++|+|++.+.... .+.+.. ..+.. +..+ ...|.+........+.|+|.+.++..
T Consensus 80 ~~~~a~~~gad~v~l~~~~---~~~~~~------------~~~~~---~~~i-g~sv~t~~~~~~a~~~gaD~i~~~~~f 140 (221)
T 1yad_A 80 RVDIALFSTIHRVQLPSGS---FSPKQI------------RARFP---HLHI-GRSVHSLEEAVQAEKEDADYVLFGHVF 140 (221)
T ss_dssp CHHHHHTTTCCEEEECTTS---CCHHHH------------HHHCT---TCEE-EEEECSHHHHHHHHHTTCSEEEEECCC
T ss_pred hHHHHHHcCCCEEEeCCCc---cCHHHH------------HHHCC---CCEE-EEEcCCHHHHHHHHhCCCCEEEECCcc
Confidence 3455677899999875321 232221 11221 2333 33554433345556789997755321
Q ss_pred ----------CCHHHH---HHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHH
Q 016596 310 ----------VDMAEG---RRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAH 376 (386)
Q Consensus 310 ----------~dl~e~---~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a 376 (386)
.++..+ ++.++-.+...|||++ ++ +.++++ .|-.++.++++---.++ |.+.+++
T Consensus 141 ~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI~~-------~n----v~~~~~-~Ga~gv~vgs~i~~~~d-~~~~~~~ 207 (221)
T 1yad_A 141 ETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGMTP-------DR----LRDVKQ-AGADGIAVMSGIFSSAE-PLEAARR 207 (221)
T ss_dssp ----------CHHHHHHHHHHHCCSCEEEESSCCG-------GG----HHHHHH-TTCSEEEESHHHHTSSS-HHHHHHH
T ss_pred ccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCCCH-------HH----HHHHHH-cCCCEEEEhHHhhCCCC-HHHHHHH
Confidence 123333 3344445777898865 33 334444 34335555544211223 6889999
Q ss_pred HHHHHHhhcC
Q 016596 377 FFEVAKAIRY 386 (386)
Q Consensus 377 ~~~a~~~yg~ 386 (386)
+.+++++.++
T Consensus 208 ~~~~~~~~~~ 217 (221)
T 1yad_A 208 YSRKLKEMRY 217 (221)
T ss_dssp HHHHHHHHC-
T ss_pred HHHHHHHhhh
Confidence 9988887653
No 185
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=69.99 E-value=27 Score=31.56 Aligned_cols=145 Identities=14% Similarity=0.184 Sum_probs=69.4
Q ss_pred HHHHHHHHHHhCCCEEEEecC----CcC--CCCHHHHHH----hhHHHHHHHHHHHHhhCCCCcEEEEecCC-------c
Q 016596 228 MAKYVQYQADNGAQAVQIFDS----WAT--ELSPVDFEE----FSLPYLKQIVDTVKQTHPDLSLILYASGS-------G 290 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~----~~~--~iSp~~f~e----f~~P~~k~l~~~i~~~~~~~~~~~H~cG~-------~ 290 (386)
..+.++.+.++|+|.|-+.-| .+. .|-...-+- .-..-.-+++..+++.+..+|+++..--| .
T Consensus 36 ~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~~g~~ 115 (271)
T 3nav_A 36 SLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYARGID 115 (271)
T ss_dssp HHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHhHH
Confidence 456677788999999877644 432 121111110 01112334555666542357877754322 1
Q ss_pred chHHHHHhcCCCEEEc-CCC----CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecC-CC
Q 016596 291 GLLERLALTGVDVVSL-DWT----VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLG-HG 364 (386)
Q Consensus 291 ~~l~~l~e~g~d~l~~-d~~----~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~g-c~ 364 (386)
.+++.+.+.|+|++-+ |-. .++.++.+..|-+..+. +.| ..++ +..+++.+. ..|||...+ .+
T Consensus 116 ~f~~~~~~aGvdGvIipDlp~ee~~~~~~~~~~~gl~~I~l--vap---~t~~----eri~~i~~~--~~gfiY~vs~~G 184 (271)
T 3nav_A 116 DFYQRCQKAGVDSVLIADVPTNESQPFVAAAEKFGIQPIFI--APP---TASD----ETLRAVAQL--GKGYTYLLSRAG 184 (271)
T ss_dssp HHHHHHHHHTCCEEEETTSCGGGCHHHHHHHHHTTCEEEEE--ECT---TCCH----HHHHHHHHH--CCSCEEECCCC-
T ss_pred HHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHcCCeEEEE--ECC---CCCH----HHHHHHHHH--CCCeEEEEeccC
Confidence 2457778899998643 322 23344444444221111 111 1233 244444444 346666421 12
Q ss_pred ---CCCCCcHHHHHHHHHHHHhh
Q 016596 365 ---IKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 365 ---i~~~tp~Eni~a~~~a~~~y 384 (386)
.....+ +.+..+++.+|++
T Consensus 185 vTG~~~~~~-~~~~~~v~~vr~~ 206 (271)
T 3nav_A 185 VTGAETKAN-MPVHALLERLQQF 206 (271)
T ss_dssp -------CC-HHHHHHHHHHHHT
T ss_pred CCCcccCCc-hhHHHHHHHHHHh
Confidence 222233 4577777777765
No 186
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=69.94 E-value=21 Score=31.94 Aligned_cols=92 Identities=12% Similarity=0.094 Sum_probs=55.7
Q ss_pred HHHHHHHHHhCCCEEEEecC-CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe----cCCcc-hHHHHHhcCCC
Q 016596 229 AKYVQYQADNGAQAVQIFDS-WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA----SGSGG-LLERLALTGVD 302 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~-~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~----cG~~~-~l~~l~e~g~d 302 (386)
.+-++.+.+.|+|++.++-- -.+-+. .+..+++++.++ +.++.+|- |-+.. -++.++++|++
T Consensus 76 ~~Di~~~~~~GadGvV~G~Lt~dg~iD--------~~~~~~Li~~a~----~~~vTFHRAfD~~~d~~~ale~L~~lG~~ 143 (256)
T 1twd_A 76 LEDVRTVRELGFPGLVTGVLDVDGNVD--------MPRMEKIMAAAG----PLAVTFHRAFDMCANPLYTLNNLAELGIA 143 (256)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSSBC--------HHHHHHHHHHHT----TSEEEECGGGGGCSCHHHHHHHHHHHTCC
T ss_pred HHHHHHHHHcCCCEEEEeeECCCCCcC--------HHHHHHHHHHhC----CCcEEEECchhccCCHHHHHHHHHHcCCC
Confidence 34455678899999987531 122344 566778888775 46889995 33333 38999999999
Q ss_pred EE-EcCCC----CCHHHHHHHhC--CCeeEE--ecCCcC
Q 016596 303 VV-SLDWT----VDMAEGRRRLG--PDVAVQ--GNVDPG 332 (386)
Q Consensus 303 ~l-~~d~~----~dl~e~~~~~g--~~~~l~--G~vd~~ 332 (386)
-+ .-... ..+..+++... +++.|+ |||.+.
T Consensus 144 rILTSG~~~~a~~g~~~L~~Lv~~a~~i~Im~GgGv~~~ 182 (256)
T 1twd_A 144 RVLTSGQKSDALQGLSKIMELIAHRDAPIIMAGAGVRAE 182 (256)
T ss_dssp EEEECTTSSSTTTTHHHHHHHHTSSSCCEEEEESSCCTT
T ss_pred EEECCCCCCCHHHHHHHHHHHHHhhCCcEEEecCCcCHH
Confidence 54 32221 23444444432 166554 667653
No 187
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=69.78 E-value=11 Score=34.68 Aligned_cols=70 Identities=10% Similarity=0.041 Sum_probs=47.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g~d 302 (386)
++++.+++.|++++++..+.+. .+|.+..++.+. .+++.+. +.+|++.|+.++.+ -+ ....+.|+|
T Consensus 39 ~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~----~~~~~~~---gr~pviaGvg~~~t~~ai~la~~A~~~Gad 111 (307)
T 3s5o_A 39 ENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVS----RVRQAMP---KNRLLLAGSGCESTQATVEMTVSMAQVGAD 111 (307)
T ss_dssp HHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHH----HHHHTSC---TTSEEEEECCCSSHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHH----HHHHHcC---CCCcEEEecCCCCHHHHHHHHHHHHHcCCC
Confidence 4445567899999998877764 689887766543 3334433 25789999877654 23 455678999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
++.+
T Consensus 112 avlv 115 (307)
T 3s5o_A 112 AAMV 115 (307)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8754
No 188
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=69.44 E-value=33 Score=32.31 Aligned_cols=105 Identities=19% Similarity=0.206 Sum_probs=57.0
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHH------H----HHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPV------D----FEEFSLPYLKQIVDTVKQTHPDLSLILYASGS 289 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~------~----f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~ 289 (386)
+.+...+.++...++|.|+|-+.-.-+ .|+||. . +++ =..+..++++++++.-+..++.+-+...
T Consensus 159 ~i~~f~~aA~~a~~aGfDgVeih~a~GyLl~qFlsp~~N~R~D~yGGslen-r~r~~~eiv~avr~~vg~~~v~vrls~~ 237 (364)
T 1vyr_A 159 IVNDFRQAVANAREAGFDLVELHSAHGYLLHQFLSPSSNQRTDQYGGSVEN-RARLVLEVVDAVCNEWSADRIGIRVSPI 237 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHH-HTHHHHHHHHHHHHHSCGGGEEEEECCS
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCccchHHHhccCCcccccCCcCCcchhc-ChhhHHHHHHHHHHhcCCCcEEEEEccc
Confidence 344445566667889999998854221 123331 0 111 1235567777777654212666633221
Q ss_pred --c--------c------hHHHHHhcCCCEEEcCCC-------CC---HHHHHHHhCCCeeEEecC
Q 016596 290 --G--------G------LLERLALTGVDVVSLDWT-------VD---MAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 290 --~--------~------~l~~l~e~g~d~l~~d~~-------~d---l~e~~~~~g~~~~l~G~v 329 (386)
+ . +...+.+.|++.+++... .+ +.++++.++.-++..|+|
T Consensus 238 ~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggi 303 (364)
T 1vyr_A 238 GTFQNVDNGPNEEADALYLIEELAKRGIAYLHMSETDLAGGKPYSEAFRQKVRERFHGVIIGAGAY 303 (364)
T ss_dssp SCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC
T ss_pred cccccccCCCCCHHHHHHHHHHHHHhCCCEEEEecCcccCCCcccHHHHHHHHHHCCCCEEEECCc
Confidence 1 1 135666789999977431 12 356777775444445555
No 189
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=69.09 E-value=67 Score=29.09 Aligned_cols=93 Identities=14% Similarity=0.168 Sum_probs=54.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCC-CCHHHHHHhhHHHHHHHHHHHH-hhCCCCcEEEEec----CCc-c--hHHHHH-h
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATE-LSPVDFEEFSLPYLKQIVDTVK-QTHPDLSLILYAS----GSG-G--LLERLA-L 298 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~-iSp~~f~ef~~P~~k~l~~~i~-~~~~~~~~~~H~c----G~~-~--~l~~l~-e 298 (386)
++.++...++|+|++.+.-|...- .|+ +=+.-|++++.++.- + +.|++++.. |.. . .+..+. +
T Consensus 88 i~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~va~a~p~~---~lPiilYn~P~~tg~~l~~~~~~~La~~ 160 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAPPSYFKNVSD----DGLFAWFSAVFSKIGKD---ARDILVYNIPSVTMVTLSVELVGRLKAA 160 (294)
T ss_dssp HHHHHHHHHTTCSEEEECCCCSSCSCCH----HHHHHHHHHHHHHHCTT---CCCEEEEECHHHHSCCCCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCEEEEcCCcCCCCCCH----HHHHHHHHHHHHhcCCC---CCcEEEEECcchhCcCCCHHHHHHHHHh
Confidence 456666778999999887665433 453 345557788887761 1 257777763 432 2 245555 5
Q ss_pred cCCC-EEEc-CCCCCHHH---HHHHhCCCeeEEecCC
Q 016596 299 TGVD-VVSL-DWTVDMAE---GRRRLGPDVAVQGNVD 330 (386)
Q Consensus 299 ~g~d-~l~~-d~~~dl~e---~~~~~g~~~~l~G~vd 330 (386)
.+ + ++.+ +...|+.. +.+..+ +..+..|-|
T Consensus 161 ~p-n~ivgiKds~gd~~~~~~~~~~~~-~f~v~~G~d 195 (294)
T 3b4u_A 161 FP-GIVTGVKDSSGNWSHTERLLKEHG-DLAILIGDE 195 (294)
T ss_dssp CT-TTEEEEEECCCCHHHHHHHHHHHT-TSEEEECCH
T ss_pred CC-CcEEEEEECCCCHHHHHHHHHhCC-CeEEEEccH
Confidence 54 5 6666 44456554 444445 555555544
No 190
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=68.81 E-value=22 Score=39.12 Aligned_cols=111 Identities=15% Similarity=0.084 Sum_probs=70.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~ 301 (386)
++.++.++.+.++|++.|.+.|..+ .+.|....++ +..+++.. +.++-+|++-+... + ..+ .+.|+
T Consensus 692 ~~~~~~a~~~~~~Ga~~i~l~Dt~G-~~~P~~~~~l--------v~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa 761 (1150)
T 3hbl_A 692 EYYVKLAKELEREGFHILAIKDMAG-LLKPKAAYEL--------IGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGV 761 (1150)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTC-CCCHHHHHHH--------HHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCeeeEcCccC-CCCHHHHHHH--------HHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCC
Confidence 5677888888999999999988765 5778776554 44444432 57899999887652 3 333 46899
Q ss_pred CEEEc-----C---CCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHH
Q 016596 302 DVVSL-----D---WTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRK 351 (386)
Q Consensus 302 d~l~~-----d---~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~ 351 (386)
+.+.. . ...+++++...+... ++++..=...-.++.+++.++.+.
T Consensus 762 ~~vD~ai~GlG~~~gn~~lE~lv~~L~~~-----g~~tgidl~~l~~~~~~~~~~~~~ 814 (1150)
T 3hbl_A 762 DIIDTAVASMSGLTSQPSANSLYYALNGF-----PRHLRTDIEGMESLSHYWSTVRTY 814 (1150)
T ss_dssp SEEEEBCGGGCSBTSCCBHHHHHHHTTTS-----SCCBCSCHHHHHHHHHHHHHHHGG
T ss_pred CEEEEeccccCCCCCCccHHHHHHHHHhc-----CCCcCccHHHHHHHHHHHHHHHhh
Confidence 98853 2 225788887777541 455432122234555555555443
No 191
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=68.51 E-value=58 Score=28.40 Aligned_cols=123 Identities=15% Similarity=0.204 Sum_probs=68.4
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc--C-
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL--D- 307 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~--d- 307 (386)
.++.+.++|+|.|.+ +.. ...+|+. .+++++.+++. |.. ++..|.+........+.|+|.+.. .
T Consensus 93 ~i~~~~~aGad~I~l-~~~-~~~~p~~--------l~~~i~~~~~~--g~~-v~~~v~t~eea~~a~~~Gad~Ig~~~~g 159 (229)
T 3q58_A 93 DVDALAQAGADIIAF-DAS-FRSRPVD--------IDSLLTRIRLH--GLL-AMADCSTVNEGISCHQKGIEFIGTTLSG 159 (229)
T ss_dssp HHHHHHHHTCSEEEE-ECC-SSCCSSC--------HHHHHHHHHHT--TCE-EEEECSSHHHHHHHHHTTCSEEECTTTT
T ss_pred HHHHHHHcCCCEEEE-Ccc-ccCChHH--------HHHHHHHHHHC--CCE-EEEecCCHHHHHHHHhCCCCEEEecCcc
Confidence 345577899998865 322 2356643 34556666665 444 566666555567778899999842 1
Q ss_pred -------CCCCHHHHHHHhCCC--eeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHH
Q 016596 308 -------WTVDMAEGRRRLGPD--VAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFF 378 (386)
Q Consensus 308 -------~~~dl~e~~~~~g~~--~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~ 378 (386)
...|+..+++....+ +.-.||| .|++++.+. ++. |-.++++++.-. -|..-.++++
T Consensus 160 ~t~~~~~~~~~~~li~~l~~~~ipvIA~GGI------~t~~d~~~~----~~~-GadgV~VGsai~----~p~~~~~~f~ 224 (229)
T 3q58_A 160 YTGPITPVEPDLAMVTQLSHAGCRVIAEGRY------NTPALAANA----IEH-GAWAVTVGSAIT----RIEHICQWFS 224 (229)
T ss_dssp SSSSCCCSSCCHHHHHHHHTTTCCEEEESSC------CSHHHHHHH----HHT-TCSEEEECHHHH----CHHHHHHHHH
T ss_pred CCCCCcCCCCCHHHHHHHHHcCCCEEEECCC------CCHHHHHHH----HHc-CCCEEEEchHhc----ChHHHHHHHH
Confidence 124665555543312 3335555 466766544 443 433666653311 1455556666
Q ss_pred HHH
Q 016596 379 EVA 381 (386)
Q Consensus 379 ~a~ 381 (386)
++.
T Consensus 225 ~~~ 227 (229)
T 3q58_A 225 HAV 227 (229)
T ss_dssp HHH
T ss_pred HHH
Confidence 554
No 192
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=68.22 E-value=40 Score=31.62 Aligned_cols=120 Identities=11% Similarity=0.145 Sum_probs=68.1
Q ss_pred HHHHHHHHHHhCCCEEEE--ecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEE
Q 016596 228 MAKYVQYQADNGAQAVQI--FDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVS 305 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i--~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~ 305 (386)
.+++++++.++|++.+-+ +.+-. ||.-|+.+....++.+.+..++. |.+++-=. =+...++.+.++ ++++-
T Consensus 122 a~~~a~~~k~aGa~~vr~q~fKprT---s~~~f~glg~egl~~l~~~~~e~--Gl~~~te~-~d~~~~~~l~~~-vd~lk 194 (350)
T 1vr6_A 122 LMETAHFLSELGVKVLRGGAYKPRT---SPYSFQGLGEKGLEYLREAADKY--GMYVVTEA-LGEDDLPKVAEY-ADIIQ 194 (350)
T ss_dssp HHHHHHHHHHTTCCEEECBSCCCCC---STTSCCCCTHHHHHHHHHHHHHH--TCEEEEEC-SSGGGHHHHHHH-CSEEE
T ss_pred HHHHHHHHHHcCCCeeeeeEEeCCC---ChHhhcCCCHHHHHHHHHHHHHc--CCcEEEEe-CCHHHHHHHHHh-CCEEE
Confidence 345667788899997643 22211 33223333345566666677776 56643322 222347888888 89987
Q ss_pred cCCC--CCHHHHHHH--hCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEe
Q 016596 306 LDWT--VDMAEGRRR--LGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILN 360 (386)
Q Consensus 306 ~d~~--~dl~e~~~~--~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils 360 (386)
+... .+..-+++. ++.-+.|-=| +.+|.+|+...+..+...+ ...++|.
T Consensus 195 IgAr~~~n~~LL~~va~~~kPVilk~G-----~~~tl~ei~~Ave~i~~~G-N~~viLc 247 (350)
T 1vr6_A 195 IGARNAQNFRLLSKAGSYNKPVLLKRG-----FMNTIEEFLLSAEYIANSG-NTKIILC 247 (350)
T ss_dssp ECGGGTTCHHHHHHHHTTCSCEEEECC-----TTCCHHHHHHHHHHHHHTT-CCCEEEE
T ss_pred ECcccccCHHHHHHHHccCCcEEEcCC-----CCCCHHHHHHHHHHHHHCC-CCeEEEE
Confidence 7543 455544443 2221222111 1468999999988876653 4467774
No 193
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=67.96 E-value=59 Score=28.39 Aligned_cols=125 Identities=17% Similarity=0.202 Sum_probs=69.8
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc--C-
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL--D- 307 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~--d- 307 (386)
.++.++++|+|.|.+ +.. ...+|+. .+++++.+++. ++. ++..|.+........+.|+|.+.. .
T Consensus 93 ~i~~~~~~Gad~V~l-~~~-~~~~p~~--------l~~~i~~~~~~--g~~-v~~~v~t~eea~~a~~~Gad~Ig~~~~g 159 (232)
T 3igs_A 93 DVDALAQAGAAIIAV-DGT-ARQRPVA--------VEALLARIHHH--HLL-TMADCSSVDDGLACQRLGADIIGTTMSG 159 (232)
T ss_dssp HHHHHHHHTCSEEEE-ECC-SSCCSSC--------HHHHHHHHHHT--TCE-EEEECCSHHHHHHHHHTTCSEEECTTTT
T ss_pred HHHHHHHcCCCEEEE-Ccc-ccCCHHH--------HHHHHHHHHHC--CCE-EEEeCCCHHHHHHHHhCCCCEEEEcCcc
Confidence 345567899998865 322 2356643 34456666665 444 566665555567778899999842 1
Q ss_pred -------CCCCHHHHHHHh--CCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHH
Q 016596 308 -------WTVDMAEGRRRL--GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFF 378 (386)
Q Consensus 308 -------~~~dl~e~~~~~--g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~ 378 (386)
...++..+++.. +-.++-.||| .|++++.+. ++. |-.++++++.-. -|.+-.++++
T Consensus 160 ~t~~~~~~~~~~~~i~~l~~~~ipvIA~GGI------~t~~d~~~~----~~~-GadgV~VGsal~----~p~~~~~~~~ 224 (232)
T 3igs_A 160 YTTPDTPEEPDLPLVKALHDAGCRVIAEGRY------NSPALAAEA----IRY-GAWAVTVGSAIT----RLEHICGWYN 224 (232)
T ss_dssp SSSSSCCSSCCHHHHHHHHHTTCCEEEESCC------CSHHHHHHH----HHT-TCSEEEECHHHH----CHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHHHhcCCcEEEECCC------CCHHHHHHH----HHc-CCCEEEEehHhc----CHHHHHHHHH
Confidence 124655444432 2223345666 456666543 443 434666654321 1666666776
Q ss_pred HHHHh
Q 016596 379 EVAKA 383 (386)
Q Consensus 379 ~a~~~ 383 (386)
++.++
T Consensus 225 ~~i~~ 229 (232)
T 3igs_A 225 DALKK 229 (232)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66553
No 194
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=67.93 E-value=17 Score=32.84 Aligned_cols=100 Identities=18% Similarity=0.056 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEecCCc-c-hHHHHHhcCCCEE--EcCCCC--------CHHHHHHHhCC-CeeEEecC
Q 016596 263 LPYLKQIVDTVKQTHPDLSLILYASGSG-G-LLERLALTGVDVV--SLDWTV--------DMAEGRRRLGP-DVAVQGNV 329 (386)
Q Consensus 263 ~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~-~l~~l~e~g~d~l--~~d~~~--------dl~e~~~~~g~-~~~l~G~v 329 (386)
.|.+.++++.+.+. |+|+.+|+-... . ..+.+.+.|+.++ ++.... ..+++.+.... ++-+ .+
T Consensus 136 ~~~~~~~~~~a~~~--glpv~iH~~~~~l~~~~~~l~~~p~~~Vi~H~g~p~~~~g~~~~~~~~~~~l~~~~nv~~--k~ 211 (294)
T 4i6k_A 136 TPDWQKFLRNVESL--NWQVELHAPPKYLVQLLPQLNEYSFDVVIDHFGRVDPVKGIEDPDYQKFLSLLNVKQHWI--KV 211 (294)
T ss_dssp SHHHHHHHHHHHHT--TCEEEEECCHHHHHHHHHHHTTSSSCEEESGGGCCCTTTCTTCHHHHHHHHHCCTTTEEE--EC
T ss_pred cHHHHHHHHHHHHc--CCEEEEeeCcchHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhCCCEEE--Ee
Confidence 36667788888887 689999985443 2 2456667786544 333211 13444443321 2211 12
Q ss_pred CcCccCC----CHHHHHHHHHHHHHHcCCCCeEEecCCCCC
Q 016596 330 DPGALFG----SKDFITNRINDTVRKAGRWKHILNLGHGIK 366 (386)
Q Consensus 330 d~~~l~g----t~eev~~~v~~~i~~~~~~g~Ils~gc~i~ 366 (386)
.-..... +.......++++++..+..+.++++++...
T Consensus 212 Sg~~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~ 252 (294)
T 4i6k_A 212 SGFYRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHT 252 (294)
T ss_dssp CCGGGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCT
T ss_pred cccccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCC
Confidence 1111111 234556788899999987799999987654
No 195
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=67.81 E-value=74 Score=29.13 Aligned_cols=155 Identities=18% Similarity=0.197 Sum_probs=87.1
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||++.+++ ++. -.++.++...++|+|++
T Consensus 68 ~~vi~~~~~~~~grvpViaGvg~--st~-----------------------------------~ai~la~~A~~~Gadav 110 (314)
T 3d0c_A 68 KQVATRVTELVNGRATVVAGIGY--SVD-----------------------------------TAIELGKSAIDSGADCV 110 (314)
T ss_dssp HHHHHHHHHHHTTSSEEEEEECS--SHH-----------------------------------HHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCeEEecCCc--CHH-----------------------------------HHHHHHHHHHHcCCCEE
Confidence 34455566667778899887655 211 12255666778999999
Q ss_pred EEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-cCCcc--hHHHHHhcCCCEEEc-CCCCCHHHHHHH-
Q 016596 244 QIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-SGSGG--LLERLALTGVDVVSL-DWTVDMAEGRRR- 318 (386)
Q Consensus 244 ~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-cG~~~--~l~~l~e~g~d~l~~-d~~~dl~e~~~~- 318 (386)
.+.-|...-.|++ =+.-|++.+.++. +.|++++. .|... .+..+++.+ +++.+ +...|+....+.
T Consensus 111 lv~~P~y~~~s~~----~l~~~f~~va~a~-----~lPiilYn~tg~l~~~~~~~La~~p-nIvgiKdssgd~~~~~~~~ 180 (314)
T 3d0c_A 111 MIHQPVHPYITDA----GAVEYYRNIIEAL-----DAPSIIYFKDAHLSDDVIKELAPLD-KLVGIKYAINDIQRVTQVM 180 (314)
T ss_dssp EECCCCCSCCCHH----HHHHHHHHHHHHS-----SSCEEEEECCTTSCTHHHHHHTTCT-TEEEEEECCCCHHHHHHHH
T ss_pred EECCCCCCCCCHH----HHHHHHHHHHHhC-----CCCEEEEeCCCCcCHHHHHHHHcCC-CEEEEEeCCCCHHHHHHHH
Confidence 9877765444543 3566778888766 36877765 34311 134444443 56666 444577655443
Q ss_pred --hCC--CeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 319 --LGP--DVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 319 --~g~--~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
.++ +..+. .|..+ + .....+. .|+.|+|-+.+|- -|+-+.+|+++++
T Consensus 181 ~~~~~~~~f~v~--------~G~d~-~--~~~~~l~-~G~~G~is~~an~-----~P~~~~~l~~a~~ 231 (314)
T 3d0c_A 181 RAVPKSSNVAFI--------CGTAE-K--WAPFFYH-AGAVGFTSGLVNV-----FPQKSFALLEALE 231 (314)
T ss_dssp HHSCGGGCCEEE--------ETTHH-H--HHHHHHH-HTCCEEEESGGGT-----CHHHHHHHHHHHH
T ss_pred HhcCCCCCEEEE--------EeCcH-H--HHHHHHH-cCCCEEEecHHHh-----hHHHHHHHHHHHH
Confidence 333 33332 34422 0 1222333 3455777766653 3566666766654
No 196
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=67.64 E-value=40 Score=30.64 Aligned_cols=95 Identities=13% Similarity=0.141 Sum_probs=54.4
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCC-CCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec----CCcchHHHHHhcCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATE-LSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS----GSGGLLERLALTGV 301 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~-iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c----G~~~~l~~l~e~g~ 301 (386)
-.++.++...++|+|++.+.-|...- .|++ =+.-|++++.++. +.|++++.. |..--.+.+.+. .
T Consensus 79 ~ai~la~~A~~~Gadavlv~~P~y~~~~s~~----~l~~~f~~va~a~-----~lPiilYn~P~~tg~~l~~~~~~~~-p 148 (293)
T 1w3i_A 79 DAIRLAKLSKDFDIVGIASYAPYYYPRMSEK----HLVKYFKTLCEVS-----PHPVYLYNYPTATGKDIDAKVAKEI-G 148 (293)
T ss_dssp HHHHHHHHGGGSCCSEEEEECCCSCSSCCHH----HHHHHHHHHHHHC-----SSCEEEEECHHHHSCCCCHHHHHHH-C
T ss_pred HHHHHHHHHHhcCCCEEEEcCCCCCCCCCHH----HHHHHHHHHHhhC-----CCCEEEEECchhhCcCCCHHHHHhc-C
Confidence 34456666777899999887776444 4543 3455677777765 368777764 322124555552 3
Q ss_pred CEEEc-CCCCCHHHHHHH--hCCCeeEEecCCc
Q 016596 302 DVVSL-DWTVDMAEGRRR--LGPDVAVQGNVDP 331 (386)
Q Consensus 302 d~l~~-d~~~dl~e~~~~--~g~~~~l~G~vd~ 331 (386)
+++.+ +...|+....+. .+++..+..|-|.
T Consensus 149 nIvgiKds~gd~~~~~~~~~~~~~f~v~~G~d~ 181 (293)
T 1w3i_A 149 CFTGVKDTIENIIHTLDYKRLNPNMLVYSGSDM 181 (293)
T ss_dssp CEEEEEECCSCHHHHHHHHHHCTTSEEEECCST
T ss_pred CEEEEEeCCCCHHHHHHHHhcCCCEEEEEccHH
Confidence 45555 334465443332 4656666555554
No 197
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=67.39 E-value=4.6 Score=35.62 Aligned_cols=69 Identities=16% Similarity=0.143 Sum_probs=41.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEc
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSL 306 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~ 306 (386)
+.++.+.++|+|.+.+-..-+.++.- -.+.. ++++.+++.. +.+...|.=.+.. +++.+.+.|+|.+++
T Consensus 21 ~~i~~~~~~Gad~ihldi~DG~fvp~---~~~g~----~~v~~lr~~~-~~~~~vhlmv~dp~~~i~~~~~aGadgv~v 91 (230)
T 1tqj_A 21 EEIKAVDEAGADWIHVDVMDGRFVPN---ITIGP----LIVDAIRPLT-KKTLDVHLMIVEPEKYVEDFAKAGADIISV 91 (230)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSC---BCBCH----HHHHHHGGGC-CSEEEEEEESSSGGGTHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEEEecCCCcc---hhhhH----HHHHHHHhhc-CCcEEEEEEccCHHHHHHHHHHcCCCEEEE
Confidence 44556778899998764322233321 01222 4556666653 3567777655543 578888999998855
No 198
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=67.05 E-value=28 Score=29.44 Aligned_cols=122 Identities=11% Similarity=0.047 Sum_probs=63.9
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC--Ccc-hHHHHHhcCCCEEEc-
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG--SGG-LLERLALTGVDVVSL- 306 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG--~~~-~l~~l~e~g~d~l~~- 306 (386)
+++.+.++|+|++.+..... ++ ..+++.+.++++ |.++.+-++. +.. .+..+.+.|+|.+.+
T Consensus 69 ~~~~a~~~Gad~v~vh~~~~----~~--------~~~~~~~~~~~~--g~~~gv~~~s~~~p~~~~~~~~~~g~d~v~~~ 134 (207)
T 3ajx_A 69 EADIAFKAGADLVTVLGSAD----DS--------TIAGAVKAAQAH--NKGVVVDLIGIEDKATRAQEVRALGAKFVEMH 134 (207)
T ss_dssp HHHHHHHTTCSEEEEETTSC----HH--------HHHHHHHHHHHH--TCEEEEECTTCSSHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHhCCCCEEEEeccCC----hH--------HHHHHHHHHHHc--CCceEEEEecCCChHHHHHHHHHhCCCEEEEE
Confidence 45677889999988654332 11 234556666665 3444332332 222 355667779997722
Q ss_pred ---C---CCCCH--HHHHHHh--CCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHH
Q 016596 307 ---D---WTVDM--AEGRRRL--GPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAH 376 (386)
Q Consensus 307 ---d---~~~dl--~e~~~~~--g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a 376 (386)
. ...+. +.+++.. .-.+.+.|||++. .++++++.+ -.+++++.+-- ...-|.+.+++
T Consensus 135 ~~~~~~~~g~~~~~~~i~~~~~~~~pi~v~GGI~~~-----------~~~~~~~aG-ad~vvvGsaI~-~~~dp~~~~~~ 201 (207)
T 3ajx_A 135 AGLDEQAKPGFDLNGLLAAGEKARVPFSVAGGVKVA-----------TIPAVQKAG-AEVAVAGGAIY-GAADPAAAAKE 201 (207)
T ss_dssp CCHHHHTSTTCCTHHHHHHHHHHTSCEEEESSCCGG-----------GHHHHHHTT-CSEEEESHHHH-TSSSHHHHHHH
T ss_pred ecccccccCCCchHHHHHHhhCCCCCEEEECCcCHH-----------HHHHHHHcC-CCEEEEeeecc-CCCCHHHHHHH
Confidence 1 11111 5566655 3357889999764 334445443 23555544311 11225566666
Q ss_pred HHH
Q 016596 377 FFE 379 (386)
Q Consensus 377 ~~~ 379 (386)
+.+
T Consensus 202 ~~~ 204 (207)
T 3ajx_A 202 LRA 204 (207)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 199
>3k2g_A Resiniferatoxin-binding, phosphotriesterase- related protein; TIM barrel, binuclear zinc, protein structure initiative II (PSI II); 1.80A {Rhodobacter sphaeroides 2}
Probab=66.64 E-value=32 Score=32.44 Aligned_cols=97 Identities=15% Similarity=0.058 Sum_probs=61.1
Q ss_pred HHHHHHHHHHhhCCCCcEEEEecC--Ccc--hHHHHHhcCCC---EE--EcCC-CCCHHHHHHHh--CCCeeEEecCCcC
Q 016596 265 YLKQIVDTVKQTHPDLSLILYASG--SGG--LLERLALTGVD---VV--SLDW-TVDMAEGRRRL--GPDVAVQGNVDPG 332 (386)
Q Consensus 265 ~~k~l~~~i~~~~~~~~~~~H~cG--~~~--~l~~l~e~g~d---~l--~~d~-~~dl~e~~~~~--g~~~~l~G~vd~~ 332 (386)
.++..++..++. |.|+++|+.| ... .++.+.+.|++ ++ +.+. ..|++.+++.+ |-.+.+-|.. +.
T Consensus 191 ~f~aq~~~A~~~--glPV~iH~~gr~~a~~e~l~iL~e~g~~~~~vvi~H~~~s~~~~e~a~~~l~~G~~I~f~g~g-t~ 267 (364)
T 3k2g_A 191 SLRGAARAQVRT--GLPLMVHLPGWFRLAHRVLDLVEEEGADLRHTVLCHMNPSHMDPVYQATLAQRGAFLEFDMIG-MD 267 (364)
T ss_dssp HHHHHHHHHHHH--CCCEEEECCTTSCCHHHHHHHHHHTTCCGGGEEECCCGGGTTCHHHHHHHHHHTCEEEECCTT-CC
T ss_pred HHHHHHHHHHHH--CCeEEEecCCCCccHHHHHHHHHHcCCCCCceEEECCCCCCCCHHHHHHHHhCCcEEEecCCc-cc
Confidence 344555556665 6899999843 433 47888887765 32 5563 33888877754 5555554431 21
Q ss_pred c-c------CCCHHHHHHHHHHHHHHcCCCCeEEecCCC
Q 016596 333 A-L------FGSKDFITNRINDTVRKAGRWKHILNLGHG 364 (386)
Q Consensus 333 ~-l------~gt~eev~~~v~~~i~~~~~~g~Ils~gc~ 364 (386)
. + ..+.++-.+.++++++.+....++|++++.
T Consensus 268 ~~f~~~~~~~~~d~~ra~~l~~lv~~gp~drilleTD~p 306 (364)
T 3k2g_A 268 FFYADQGVQCPSDDEVARAILGLADHGYLDRILLSHDVF 306 (364)
T ss_dssp CEETTTTEECCCHHHHHHHHHHHHHTTCGGGEEECCCCC
T ss_pred ccccccccccccHHHHHHHHHHHHHhCCcccEEEeCCCC
Confidence 1 1 234556677788888876656899999985
No 200
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=66.46 E-value=45 Score=31.42 Aligned_cols=68 Identities=15% Similarity=0.145 Sum_probs=41.1
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
..+.+++++++|+|+|.+.-+.+. +. ...++++.+++.+++.+++.=.+........+.+.|+|++.+
T Consensus 101 ~~e~~~~a~~aGvdvI~id~a~G~--~~---------~~~e~I~~ir~~~~~~~Vi~G~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 101 ELQRAEALRDAGADFFCVDVAHAH--AK---------YVGKTLKSLRQLLGSRCIMAGNVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHTTCCEEEEECSCCS--SH---------HHHHHHHHHHHHHTTCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCCCC--cH---------hHHHHHHHHHHhcCCCeEEEcCcCCHHHHHHHHHcCCCEEEE
Confidence 456678888999998776322221 21 234556666665435665542333333456778899999876
No 201
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=66.44 E-value=20 Score=34.29 Aligned_cols=65 Identities=18% Similarity=0.177 Sum_probs=38.8
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.++.++++|+|.|.+ +... -.| ....++++.+++..++.|+++...........+.+.|+|.+.+
T Consensus 157 ~a~~~~~~G~d~i~i-~~~~--g~~--------~~~~e~i~~ir~~~~~~pviv~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 157 RVEELVKAHVDILVI-DSAH--GHS--------TRIIELIKKIKTKYPNLDLIAGNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHTTCSEEEE-CCSC--CSS--------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHCCCCEEEE-eCCC--CCh--------HHHHHHHHHHHHHCCCCeEEEcCCCcHHHHHHHHhcCCCEEEE
Confidence 344567899999887 2111 122 2334556666665435677763333323467778899999876
No 202
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=66.23 E-value=27 Score=30.31 Aligned_cols=84 Identities=18% Similarity=0.142 Sum_probs=49.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCCCEEEcC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGVDVVSLD 307 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~d~l~~d 307 (386)
.+.++.+.++|++.+.+.+..+.... .+...+++..+++.. +.|++.|..=... .++.+.+.|+|.+.+.
T Consensus 36 ~~~a~~~~~~G~d~i~v~~~~~~~~~--------~~~~~~~i~~i~~~~-~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~ 106 (253)
T 1h5y_A 36 VEMAVRYEEEGADEIAILDITAAPEG--------RATFIDSVKRVAEAV-SIPVLVGGGVRSLEDATTLFRAGADKVSVN 106 (253)
T ss_dssp HHHHHHHHHTTCSCEEEEECCCCTTT--------HHHHHHHHHHHHHHC-SSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHcCCCEEEEEeCCccccC--------CcccHHHHHHHHHhc-CCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 45666778899999988775443311 122334445555543 5676654321222 3677888999998865
Q ss_pred CC----C-CHHHHHHHhCC
Q 016596 308 WT----V-DMAEGRRRLGP 321 (386)
Q Consensus 308 ~~----~-dl~e~~~~~g~ 321 (386)
.. . -+.++.+.+|.
T Consensus 107 ~~~~~~~~~~~~~~~~~g~ 125 (253)
T 1h5y_A 107 TAAVRNPQLVALLAREFGS 125 (253)
T ss_dssp HHHHHCTHHHHHHHHHHCG
T ss_pred hHHhhCcHHHHHHHHHcCC
Confidence 32 1 25566677774
No 203
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=66.12 E-value=24 Score=38.89 Aligned_cols=86 Identities=15% Similarity=0.167 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~ 301 (386)
++.++.++++.++|++.|.+.|..+ .+.|..+.+++ ..+++.. +.++-+|++.+... + ..+ .+.|+
T Consensus 709 ~~~~~~~~~~~~~Ga~~i~l~DT~G-~~~P~~~~~lv--------~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa 778 (1165)
T 2qf7_A 709 KYYTNLAVELEKAGAHIIAVKDMAG-LLKPAAAKVLF--------KALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGV 778 (1165)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEETTC-CCCHHHHHHHH--------HHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCccC-CcCHHHHHHHH--------HHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCC
Confidence 4567778888899999999988776 46677765543 3444433 46889999887652 2 333 46899
Q ss_pred CEEEc-----CC---CCCHHHHHHHhCC
Q 016596 302 DVVSL-----DW---TVDMAEGRRRLGP 321 (386)
Q Consensus 302 d~l~~-----d~---~~dl~e~~~~~g~ 321 (386)
+.+.. .. ..+++++.-.+..
T Consensus 779 ~~vd~ti~GlGe~~Gn~~le~vv~~L~~ 806 (1165)
T 2qf7_A 779 DAVDAAMDALSGNTSQPCLGSIVEALSG 806 (1165)
T ss_dssp SEEEEBCGGGCSBTSCCBHHHHHHHHTT
T ss_pred CEEEecccccCCCccchhHHHHHHHHHh
Confidence 98853 22 2577777777654
No 204
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=66.10 E-value=26 Score=34.39 Aligned_cols=67 Identities=19% Similarity=0.234 Sum_probs=41.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.++.++++|++.+.+.-..+ .+ +...+.++.+++..++.|+++-..........+.+.|+|.+.+
T Consensus 239 ~~~a~~l~~aGvd~v~i~~~~G--~~---------~~~~e~i~~i~~~~p~~pvi~g~~~t~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 239 MERVEKLVKAGVDVIVIDTAHG--HS---------RRVIETLEMIKADYPDLPVVAGNVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC--SS---------HHHHHHHHHHHHHCTTSCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHhCCCEEEEEecCC--ch---------HHHHHHHHHHHHHCCCceEEeCCcCCHHHHHHHHHcCCCEEEE
Confidence 4566778899999988733222 11 2334566666666545677663221222357778899999876
No 205
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=66.02 E-value=64 Score=31.83 Aligned_cols=67 Identities=16% Similarity=0.191 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.+++++++|+|.+.+....+. + ....++++.+++..++.+++.-.++.......+.+.|+|.+.+
T Consensus 258 ~era~aLveaGvd~I~Id~a~g~--~---------~~v~~~i~~i~~~~~~~~vi~g~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 258 MTRIDALVKASVDAIVLDTAHGH--S---------QGVIDKVKEVRAKYPSLNIIAGNVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHHHTTCSEEEEECSCTT--S---------HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhhccceEEecccccc--h---------hhhhhHHHHHHHhCCCceEEeeeeccHHHHHHHHHhCCCEEEE
Confidence 45677788999999887543221 1 1234456666665545677765555544567788999998864
No 206
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=65.58 E-value=39 Score=31.02 Aligned_cols=79 Identities=11% Similarity=0.127 Sum_probs=47.5
Q ss_pred HHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE
Q 016596 164 GKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAV 243 (386)
Q Consensus 164 ~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i 243 (386)
.+.++...+..++++||+..+++.- ++-.++.++...++|+|++
T Consensus 64 ~~v~~~~~~~~~grvpviaGvg~~~------------------------------------t~~ai~la~~A~~~Gadav 107 (309)
T 3fkr_A 64 DVLTRTILEHVAGRVPVIVTTSHYS------------------------------------TQVCAARSLRAQQLGAAMV 107 (309)
T ss_dssp HHHHHHHHHHHTTSSCEEEECCCSS------------------------------------HHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHHhCCCCcEEEecCCch------------------------------------HHHHHHHHHHHHHcCCCEE
Confidence 3445555666677888888765441 1222345556677899998
Q ss_pred EEecCCc---CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec
Q 016596 244 QIFDSWA---TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS 287 (386)
Q Consensus 244 ~i~d~~~---~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c 287 (386)
.+.-|.. .-.|++ =+.-|++.+.++. +.|++++..
T Consensus 108 lv~~Pyy~~~~~~s~~----~l~~~f~~va~a~-----~lPiilYn~ 145 (309)
T 3fkr_A 108 MAMPPYHGATFRVPEA----QIFEFYARVSDAI-----AIPIMVQDA 145 (309)
T ss_dssp EECCSCBTTTBCCCHH----HHHHHHHHHHHHC-----SSCEEEEEC
T ss_pred EEcCCCCccCCCCCHH----HHHHHHHHHHHhc-----CCCEEEEeC
Confidence 8766653 123433 3344777777765 357777654
No 207
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=65.41 E-value=72 Score=31.34 Aligned_cols=67 Identities=19% Similarity=0.173 Sum_probs=40.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d 307 (386)
+.+++++++|+|.|.+.-..+ -+ +...++++.+++..++.+++.-..........+.+.|+|++.+.
T Consensus 234 ~~a~~l~~aG~d~I~id~a~g--~~---------~~~~~~i~~ir~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~Vg 300 (496)
T 4fxs_A 234 ERVKALVEAGVDVLLIDSSHG--HS---------EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKVG 300 (496)
T ss_dssp HHHHHHHHTTCSEEEEECSCT--TS---------HHHHHHHHHHHHHCTTCCEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHhccCceEEeccccc--cc---------hHHHHHHHHHHHHCCCceEEEcccCcHHHHHHHHHhCCCEEEEC
Confidence 446678889999987643221 11 23345566666655456776632222234677889999998753
No 208
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=65.38 E-value=81 Score=28.65 Aligned_cols=77 Identities=14% Similarity=0.124 Sum_probs=43.3
Q ss_pred HHHHHHHhCCCEEEEecCCc--C-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec---CCc--c---------hH
Q 016596 231 YVQYQADNGAQAVQIFDSWA--T-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS---GSG--G---------LL 293 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~--~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c---G~~--~---------~l 293 (386)
-+.+..+.|||.|-+++... + --|+..++. +++.. ++|+.+-+- |+. + .+
T Consensus 51 ~a~~A~~gGAdRIELc~~l~~GGlTPS~g~i~~------------a~~~~-~ipV~vMIRPRgGdF~Ys~~E~~~M~~dI 117 (287)
T 3iwp_A 51 SAVNAERGGADRIELCSGLSEGGTTPSMGVLQV------------VKQSV-QIPVFVMIRPRGGDFLYSDREIEVMKADI 117 (287)
T ss_dssp HHHHHHHHTCSEEEECBCGGGTCBCCCHHHHHH------------HHTTC-CSCEEEECCSSSSCSCCCHHHHHHHHHHH
T ss_pred HHHHHHHhCCCEEEECCCCCCCCCCCCHHHHHH------------HHHhc-CCCeEEEEecCCCCcccCHHHHHHHHHHH
Confidence 34456678999999987642 3 345444333 33322 356544442 321 1 24
Q ss_pred HHHHhcCCCEEEcC-----CCCCHHHHHHHhC
Q 016596 294 ERLALTGVDVVSLD-----WTVDMAEGRRRLG 320 (386)
Q Consensus 294 ~~l~e~g~d~l~~d-----~~~dl~e~~~~~g 320 (386)
+.++++|+|.+.+. ..+|+...++.+.
T Consensus 118 ~~~~~~GAdGvVfG~L~~dg~iD~~~~~~Li~ 149 (287)
T 3iwp_A 118 RLAKLYGADGLVFGALTEDGHIDKELCMSLMA 149 (287)
T ss_dssp HHHHHTTCSEEEECCBCTTSCBCHHHHHHHHH
T ss_pred HHHHHcCCCEEEEeeeCCCCCcCHHHHHHHHH
Confidence 56677888877553 3467776666553
No 209
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=65.26 E-value=42 Score=30.56 Aligned_cols=91 Identities=11% Similarity=0.055 Sum_probs=55.4
Q ss_pred HHHHHHHHHhCCCEEEEecC-CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC----Ccc-hHHHHHhcCCC
Q 016596 229 AKYVQYQADNGAQAVQIFDS-WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG----SGG-LLERLALTGVD 302 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~-~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG----~~~-~l~~l~e~g~d 302 (386)
.+.++.+.++|+|+|.++-- -.+-+.. +..+++++..+ +.++.+|--= +.. -++.++++|++
T Consensus 114 ~~dI~~~~~~GAdGvVfG~L~~dg~iD~--------~~~~~Li~~a~----~l~vTFHRAFD~~~d~~~Ale~Li~lGvd 181 (287)
T 3iwp_A 114 KADIRLAKLYGADGLVFGALTEDGHIDK--------ELCMSLMAICR----PLPVTFHRAFDMVHDPMAALETLLTLGFE 181 (287)
T ss_dssp HHHHHHHHHTTCSEEEECCBCTTSCBCH--------HHHHHHHHHHT----TSCEEECGGGGGCSCHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCCEEEEeeeCCCCCcCH--------HHHHHHHHHcC----CCcEEEECchhccCCHHHHHHHHHHcCCC
Confidence 34455678899999988631 1123443 44566677664 3578899642 222 38999999999
Q ss_pred EEEc-CCC----CC---HHHHHHHhCCCeeE--EecCCc
Q 016596 303 VVSL-DWT----VD---MAEGRRRLGPDVAV--QGNVDP 331 (386)
Q Consensus 303 ~l~~-d~~----~d---l~e~~~~~g~~~~l--~G~vd~ 331 (386)
-+-. ... .. ++++.+..++++.| -|||.+
T Consensus 182 rILTSG~~~~a~~Gl~~Lk~Lv~~a~~rI~ImaGGGV~~ 220 (287)
T 3iwp_A 182 RVLTSGCDSSALEGLPLIKRLIEQAKGRIVVMPGGGITD 220 (287)
T ss_dssp EEEECTTSSSTTTTHHHHHHHHHHHTTSSEEEECTTCCT
T ss_pred EEECCCCCCChHHhHHHHHHHHHHhCCCCEEEECCCcCH
Confidence 6532 211 23 45556667777655 466765
No 210
>1dos_A Aldolase class II; lyase, classii fructose 1,6-bisphosphate aldolase, glycolysis; 1.67A {Escherichia coli} SCOP: c.1.10.2 PDB: 1b57_A* 1gyn_A 1zen_A
Probab=65.25 E-value=83 Score=29.55 Aligned_cols=100 Identities=14% Similarity=0.148 Sum_probs=54.1
Q ss_pred CCcEEEEec-CCcc---hHHHHHhc-----------CCCEEEcCCC-C----CHHHHHHHhC----CCeeE------Eec
Q 016596 279 DLSLILYAS-GSGG---LLERLALT-----------GVDVVSLDWT-V----DMAEGRRRLG----PDVAV------QGN 328 (386)
Q Consensus 279 ~~~~~~H~c-G~~~---~l~~l~e~-----------g~d~l~~d~~-~----dl~e~~~~~g----~~~~l------~G~ 328 (386)
++|+.+|.+ |... +++.+++. |+..+.+|.. . +++..++.+. ..+++ .|+
T Consensus 101 ~VPVaLHlDHg~~~~~~~i~~~i~a~~~~~~~~~~~gFtSVMiDgS~~p~eENI~~Tkevv~~ah~~gvsVEaELG~vGG 180 (358)
T 1dos_A 101 GVPVILHTDHCAKKLLPWIDGLLDAGEKHFAATGKPLFSSHMIDLSEESLQENIEICSKYLERMSKIGMTLEIELGCTGG 180 (358)
T ss_dssp TCEEEEEECCCCGGGHHHHHHHHHHHHHHHHHHSSCSCSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEECCCCCC
T ss_pred CCCEEEECCCCCCccHHHHHHHHHHHHHHHHhcccCCCceEeecCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeccccC
Confidence 589999986 4332 24544443 4888888754 2 3333333221 11232 122
Q ss_pred ----CCc-----CccCCCHHHHHHHHHHH--HHHcCCCCeEEe----cCCCCC----CCCcHHHHHHHHHHHH
Q 016596 329 ----VDP-----GALFGSKDFITNRINDT--VRKAGRWKHILN----LGHGIK----VGTPEENVAHFFEVAK 382 (386)
Q Consensus 329 ----vd~-----~~l~gt~eev~~~v~~~--i~~~~~~g~Ils----~gc~i~----~~tp~Eni~a~~~a~~ 382 (386)
++. ..++-+|||+.+.++++ ++ ..+.|+ +.|++- +...++.++.+-++++
T Consensus 181 ~EDgv~~~~~~~~~~yT~Peea~~fv~~ttgvd----~~d~LAvaiGt~HG~Yk~g~p~L~~~~L~~i~~~i~ 249 (358)
T 1dos_A 181 EEDGVDNSHMDASALYTQPEDVDYAYTELSKIS----PRFTIAASFGNVHGVYKAGNVVLTPTILRDSQEYVS 249 (358)
T ss_dssp CCCCCSCCCCCCCCCSCCHHHHHHHHHHHHTTC----SCEEEECCSSCCCSSCCCSCCCCCTHHHHHHHHHHH
T ss_pred cCCCccccccccccccCCHHHHHHHHHHhcCCC----hhceEEEecccccCccCCCCCCcCHHHHHHHHHHHH
Confidence 221 12468899999999874 33 233443 345553 3445777777666554
No 211
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=65.02 E-value=62 Score=30.28 Aligned_cols=60 Identities=10% Similarity=0.116 Sum_probs=36.9
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.++.+.+.|+++|.+.-.. .+ .++++.+++. +.+ +++.+.+........+.|+|.+.+
T Consensus 112 ~~~~~~~~~~g~~~V~~~~g~---~~------------~~~i~~~~~~--g~~-v~~~v~t~~~a~~a~~~GaD~i~v 171 (369)
T 3bw2_A 112 DAKLAVLLDDPVPVVSFHFGV---PD------------REVIARLRRA--GTL-TLVTATTPEEARAVEAAGADAVIA 171 (369)
T ss_dssp HHHHHHHHHSCCSEEEEESSC---CC------------HHHHHHHHHT--TCE-EEEEESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCEEEEeCCC---Cc------------HHHHHHHHHC--CCe-EEEECCCHHHHHHHHHcCCCEEEE
Confidence 445667778999998874321 12 2344555654 455 455665544455667889998866
No 212
>2gzx_A Putative TATD related DNAse; deoxyribonuclease, NESG, ZR237, structural GENO PSI, protein structure initiative; 2.20A {Staphylococcus aureus subsp}
Probab=64.80 E-value=61 Score=28.09 Aligned_cols=97 Identities=6% Similarity=0.045 Sum_probs=59.0
Q ss_pred HhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcC---CCEE-EcCCCCCHHHHHHHhC-CCeeEEecCCcCc
Q 016596 260 EFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTG---VDVV-SLDWTVDMAEGRRRLG-PDVAVQGNVDPGA 333 (386)
Q Consensus 260 ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g---~d~l-~~d~~~dl~e~~~~~g-~~~~l~G~vd~~~ 333 (386)
+.-.|.+.++++.+.+. |.|+.+|+-.... .++.+.++| ..++ +.. ..+...+++.+. ..+-+ .++...
T Consensus 105 ~~~~~~~~~~~~~a~~~--~~pv~iH~~~~~~~~~~~l~~~p~~~~~~i~H~~-~g~~~~~~~~l~~~~~y~--~~sg~~ 179 (265)
T 2gzx_A 105 DVQKEVFRKQIALAKRL--KLPIIIHNREATQDCIDILLEEHAEEVGGIMHSF-SGSPEIADIVTNKLNFYI--SLGGPV 179 (265)
T ss_dssp HHHHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHHTTGGGTCEEETTC-CSCHHHHHHHHHTSCCEE--EECGGG
T ss_pred HHHHHHHHHHHHHHHHc--CCcEEEEecccHHHHHHHHHhcCCCCCcEEEEcC-CCCHHHHHHHHHHCCceE--Eeccee
Confidence 34557788888888887 6899999865544 467777777 3444 222 236777776654 22221 122111
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 334 LFGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 334 l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
..... +.++++++..+..+++++++...
T Consensus 180 ~~~~~----~~~~~~i~~~~~dril~gSD~P~ 207 (265)
T 2gzx_A 180 TFKNA----KQPKEVAKHVSMERLLVETDAPY 207 (265)
T ss_dssp GCSSC----CHHHHHHHHSCTTTEEECCCTTS
T ss_pred ecCCc----HHHHHHHHhCChhhEEEccCCCC
Confidence 12221 24667788877679999998753
No 213
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=64.67 E-value=93 Score=29.32 Aligned_cols=107 Identities=15% Similarity=0.128 Sum_probs=57.8
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEec
Q 016596 222 RKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYAS 287 (386)
Q Consensus 222 ~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c 287 (386)
+.+.+...+.++...++|.|+|-|.-.-+ .|+||.. +++ =..+..++++++++.-+.-++.+-+.
T Consensus 162 ~~~i~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGGslen-R~r~~~eiv~aVr~avg~~~v~vrls 240 (377)
T 2r14_A 162 PGIVEDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGGSIEN-RARFPLEVVDAVAEVFGPERVGIRLT 240 (377)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCcchhh-chHHHHHHHHHHHHHcCCCcEEEEec
Confidence 33445555666677889999998753221 1333321 111 12344566666665432116777653
Q ss_pred CC---------cc------hHHHHHhcCCCEEEcCCC----------CC-HHHHHHHhCCCeeEEecC
Q 016596 288 GS---------GG------LLERLALTGVDVVSLDWT----------VD-MAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 288 G~---------~~------~l~~l~e~g~d~l~~d~~----------~d-l~e~~~~~g~~~~l~G~v 329 (386)
.. +. +...+.+.|++.+++... .+ +.++|+.++.-++..|++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi 308 (377)
T 2r14_A 241 PFLELFGLTDDEPEAMAFYLAGELDRRGLAYLHFNEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNY 308 (377)
T ss_dssp TTCCCTTCCCSCHHHHHHHHHHHHHHTTCSEEEEECCC------CCCTTHHHHHHHHCCSEEEEESSC
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCcccCCCCcchHHHHHHHHHHCCCCEEEECCC
Confidence 21 11 135666789999877431 12 456777775545555555
No 214
>3u0h_A Xylose isomerase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, TIM barrel; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=63.95 E-value=74 Score=27.71 Aligned_cols=156 Identities=13% Similarity=-0.005 Sum_probs=88.4
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC----------c-c--
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS----------G-G-- 291 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~----------~-~-- 291 (386)
.+.+.+.++...+.|+..+.+.-.-++--.++...+.....++++.+.++++ |+.+.+|.++. . +
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~~~~p~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lE~~~~~~~~~~~~~~~~~~~ 160 (281)
T 3u0h_A 83 LSLLPDRARLCARLGARSVTAFLWPSMDEEPVRYISQLARRIRQVAVELLPL--GMRVGLEYVGPHHLRHRRYPFVQSLA 160 (281)
T ss_dssp HHTHHHHHHHHHHTTCCEEEEECCSEESSCHHHHHHHHHHHHHHHHHHHGGG--TCEEEEECCCCGGGCCSSEECCCSHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEeecCCCCCcchhhHHHHHHHHHHHHHHHHHc--CCEEEEEeccccccccccccccCCHH
Confidence 4455566667778899988743211111234445566778899999999887 68889998741 1 1
Q ss_pred h-HHHHHhcCCC--EEEcC------CCCCHHHHHHHhCCCeeEE--ecCCc---------Cc-c-CCCHHHHHHHHHHHH
Q 016596 292 L-LERLALTGVD--VVSLD------WTVDMAEGRRRLGPDVAVQ--GNVDP---------GA-L-FGSKDFITNRINDTV 349 (386)
Q Consensus 292 ~-l~~l~e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l~--G~vd~---------~~-l-~gt~eev~~~v~~~i 349 (386)
. ++.+.+++-. .+.+| ...|+.++.+.+++++..+ -+... .. + .|..+ -+.+.+.|
T Consensus 161 ~~~~l~~~v~~~~vg~~~D~~h~~~~g~~~~~~~~~~~~~i~~vHl~D~~~~~~~~~~~~~~~~G~G~id--~~~~~~~L 238 (281)
T 3u0h_A 161 DLKTFWEAIGAPNVGALVDSYHWYTAGEHEDDLAQLPPEKVVYVHINDTRDAPEDAHDGKRLLPGDGRIP--LVPFLRGL 238 (281)
T ss_dssp HHHHHHHHHCCTTEEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECBCSSCTTTCCTTSCBCTTSSSSC--HHHHHHHH
T ss_pred HHHHHHHHcCCCCeeEEeehhHHHHcCCCHHHHHhcCcccEEEEEecCCCCCcccchhccCcCCCCcCcC--HHHHHHHH
Confidence 1 3444455533 23333 2358999888888775442 11111 11 2 34432 34455566
Q ss_pred HHcC-CCCeEEec-CCCCCCCCcHHHHHHHHHHHHhh
Q 016596 350 RKAG-RWKHILNL-GHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 350 ~~~~-~~g~Ils~-gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
+..+ .|.+++=. +.......|.|-++.-++..+++
T Consensus 239 ~~~gy~g~~~lE~~~~~~~~~~~~~~~~~~~~~l~~~ 275 (281)
T 3u0h_A 239 YLAGYRGPVAAEVLHETPLDGTGESRARLVRERLEKL 275 (281)
T ss_dssp HHHTCCSEEEECCCCSSCCSSCHHHHHHHHHHHHHHH
T ss_pred HHcCCCCcEEEEecChhhccCCHHHHHHHHHHHHHHH
Confidence 6666 55555533 22333345677777666666653
No 215
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=63.33 E-value=44 Score=28.43 Aligned_cols=127 Identities=16% Similarity=0.085 Sum_probs=68.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC------cchHH----H
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS------GGLLE----R 295 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~------~~~l~----~ 295 (386)
+....+++.+.++|+|.+.+.--.+ +++ ++.+++.+ |+.+.-.+.-. ...++ .
T Consensus 65 ~t~~~~v~~~~~~Gad~vtvh~~~g----~~~------------i~~~~~~~-gv~vl~~t~~~~~~~~~~~~v~~~~~~ 127 (208)
T 2czd_A 65 NTNRLIARKVFGAGADYVIVHTFVG----RDS------------VMAVKELG-EIIMVVEMSHPGALEFINPLTDRFIEV 127 (208)
T ss_dssp HHHHHHHHHHHHTTCSEEEEESTTC----HHH------------HHHHHTTS-EEEEECCCCSGGGGTTTGGGHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCEEEEeccCC----HHH------------HHHHHHhC-CcEEEEecCCcchhhHHHHHHHHHHHH
Confidence 3445678888899999987643222 222 44555543 33332222110 00122 2
Q ss_pred HHhcCCCEEEcCCCC--CHHHHHHHhCCC-eeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCC-CCcH
Q 016596 296 LALTGVDVVSLDWTV--DMAEGRRRLGPD-VAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKV-GTPE 371 (386)
Q Consensus 296 l~e~g~d~l~~d~~~--dl~e~~~~~g~~-~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~-~tp~ 371 (386)
-.+.|++++.+.... .++++++..+.+ +.+.|||.+.. ++ ++++++.+. ..++.+. .+-. .-|.
T Consensus 128 a~~~G~~G~~~~~~~~~~i~~lr~~~~~~~~iv~gGI~~~g--~~-------~~~~~~aGa-d~vvvGr--~I~~a~dp~ 195 (208)
T 2czd_A 128 ANEIEPFGVIAPGTRPERIGYIRDRLKEGIKILAPGIGAQG--GK-------AKDAVKAGA-DYIIVGR--AIYNAPNPR 195 (208)
T ss_dssp HHHHCCSEEECCCSSTHHHHHHHHHSCTTCEEEECCCCSST--TH-------HHHHHHHTC-SEEEECH--HHHTSSSHH
T ss_pred HHHhCCcEEEECCCChHHHHHHHHhCCCCeEEEECCCCCCC--CC-------HHHHHHcCC-CEEEECh--HHhcCCCHH
Confidence 245689988665432 567788888754 46788887742 12 455555432 2444433 2221 2266
Q ss_pred HHHHHHHHHH
Q 016596 372 ENVAHFFEVA 381 (386)
Q Consensus 372 Eni~a~~~a~ 381 (386)
+.++++.+..
T Consensus 196 ~~~~~l~~~i 205 (208)
T 2czd_A 196 EAAKAIYDEI 205 (208)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7777776654
No 216
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=62.69 E-value=19 Score=32.50 Aligned_cols=62 Identities=15% Similarity=0.143 Sum_probs=32.0
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
+.++|+...--+.+||-.+|..-+|. .+.++++.+.+.+ |+|+ ++.|+|.+..++++++++|
T Consensus 83 v~~ir~~~~~Pii~m~y~n~v~~~g~----~~f~~~~~~aG~d-Gviv-------~Dl~~ee~~~~~~~~~~~g 144 (271)
T 1ujp_A 83 VREVRALTEKPLFLMTYLNPVLAWGP----ERFFGLFKQAGAT-GVIL-------PDLPPDEDPGLVRLAQEIG 144 (271)
T ss_dssp HHHHHHHCCSCEEEECCHHHHHHHCH----HHHHHHHHHHTCC-EEEC-------TTCCGGGCHHHHHHHHHHT
T ss_pred HHHHHhcCCCCEEEEecCcHHHHhhH----HHHHHHHHHcCCC-EEEe-------cCCCHHHHHHHHHHHHHcC
Confidence 45566654333455544443222444 3444555444323 4554 2444566777777777775
No 217
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=62.26 E-value=61 Score=29.68 Aligned_cols=50 Identities=20% Similarity=0.302 Sum_probs=29.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS 287 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c 287 (386)
+.++...++|+|++.+.-|. ...| ++=+.-|++.+.++... +.|++++..
T Consensus 93 ~la~~A~~~Gadavlv~~P~-~~~s----~~~l~~~f~~va~a~~~---~lPiilYn~ 142 (313)
T 3dz1_A 93 RLARLSMDAGAAGVMIAPPP-SLRT----DEQITTYFRQATEAIGD---DVPWVLQDY 142 (313)
T ss_dssp HHHHHHHHHTCSEEEECCCT-TCCS----HHHHHHHHHHHHHHHCT---TSCEEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCC-CCCC----HHHHHHHHHHHHHhCCC---CCcEEEEeC
Confidence 44455666788888775555 3333 23455577777777631 256666654
No 218
>3iv3_A Tagatose 1,6-diphosphate aldolase 2; TIM barrel, phosphate binding, tagatose-bisphosphate aldolas tagatose-1,6-bisphosphate aldolase; HET: MSE; 1.80A {Streptococcus mutans} PDB: 3mhf_A 3mhg_A 3jrk_A 3kao_A* 3myp_A 3myo_A
Probab=62.22 E-value=61 Score=30.15 Aligned_cols=119 Identities=13% Similarity=0.247 Sum_probs=71.9
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe--cC----C-c------------ch
Q 016596 232 VQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA--SG----S-G------------GL 292 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~--cG----~-~------------~~ 292 (386)
.+..++.|||++-+.--++.- .+...++--.-.+.++.+.+++. |.|+++.+ -+ + . ..
T Consensus 116 ve~a~~~GADAVk~lv~~g~d-~~~e~~~~q~~~l~rv~~ec~~~--GiPlllEil~y~~~~~~~~~~~~a~~~p~~V~~ 192 (332)
T 3iv3_A 116 IKRLKEAGADAVKFLLYYDVD-GDPQVNVQKQAYIERIGSECQAE--DIPFFLEILTYDETISNNSSVEFAKVKVHKVND 192 (332)
T ss_dssp HHHHHHTTCSEEEEEEEECTT-SCHHHHHHHHHHHHHHHHHHHHH--TCCEEEEEEECBTTBSCTTSHHHHTTHHHHHHH
T ss_pred HHHHHHcCCCEEEEEEEcCCC-chHHHHHHHHHHHHHHHHHHHHc--CCceEEEEeccCCCCCCCcchhhhccCHHHHHH
Confidence 345678999998765433332 23344555567889999999998 68988744 22 1 1 11
Q ss_pred -HHHH--HhcCCCEEEcCCCCCH---------------HHHHHHhCC-------C-eeEEecCCcCccCCCHHHHHHHHH
Q 016596 293 -LERL--ALTGVDVVSLDWTVDM---------------AEGRRRLGP-------D-VAVQGNVDPGALFGSKDFITNRIN 346 (386)
Q Consensus 293 -l~~l--~e~g~d~l~~d~~~dl---------------~e~~~~~g~-------~-~~l~G~vd~~~l~gt~eev~~~v~ 346 (386)
...+ .++|+|++-+....|+ +++.+.|.. - +.+.||+ +.++..+.++
T Consensus 193 a~R~~~~~elGaDv~Kve~p~~~~~v~g~~~~~~~y~~~ea~~~f~~~~~a~~~P~v~lsgG~-------~~~~fl~~v~ 265 (332)
T 3iv3_A 193 AMKVFSAERFGIDVLKVEVPVNMVYVEGFAEGEVVYSKEEAAQAFREQEASTDLPYIYLSAGV-------SAELFQETLV 265 (332)
T ss_dssp HHHHHTSGGGCCSEEEECCSSCGGGBTTTCSSCCCBCHHHHHHHHHHHHHTCSSCEEEECTTC-------CHHHHHHHHH
T ss_pred HHHHHhhcCcCCcEEEEecCCChhhhcccccccccccHHHHHHHHHHHHhcCCCCEEEECCCC-------CHHHHHHHHH
Confidence 3445 5779999987766555 344333321 1 1223443 4678888888
Q ss_pred HHHHHcCC-CCeEEe
Q 016596 347 DTVRKAGR-WKHILN 360 (386)
Q Consensus 347 ~~i~~~~~-~g~Ils 360 (386)
..++.+++ .|+.++
T Consensus 266 ~A~~aGa~f~Gv~~G 280 (332)
T 3iv3_A 266 FAHKAGAKFNGVLCG 280 (332)
T ss_dssp HHHHHTCCCCEEEEC
T ss_pred HHHHcCCCcceEEee
Confidence 88887641 466553
No 219
>1gml_A T-complex protein 1 subunit gamma; chaperone, chaperonin, actin, tubulin; 2.2A {Mus musculus} SCOP: c.8.5.2 PDB: 1gn1_A
Probab=62.18 E-value=10 Score=31.90 Aligned_cols=73 Identities=15% Similarity=0.164 Sum_probs=51.4
Q ss_pred CCHHHHHHhh---HHHHHHHHHHHHhhCCCCcEEEEecCCcc-h-HHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEe
Q 016596 253 LSPVDFEEFS---LPYLKQIVDTVKQTHPDLSLILYASGSGG-L-LERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQG 327 (386)
Q Consensus 253 iSp~~f~ef~---~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~-l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G 327 (386)
-|++.|+++. +.++++.++.+.+.| +.++-+-+... . +++|.+.|+-++-.-...|++.+.+..|.+ +..
T Consensus 51 ~~~~~~~~~~~~E~~~l~~~v~kI~~~g---~nVVl~~k~I~d~a~~~l~k~gI~~vr~v~~~dleria~atGa~--iv~ 125 (178)
T 1gml_A 51 TREEDFTRILQMEEEYIHQLCEDIIQLK---PDVVITEKGISDLAQHYLMRANVTAIRRVRKTDNNRIARACGAR--IVS 125 (178)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHTTC---CSEEEESSCBCHHHHHHHHHTTCEEECCCCHHHHHHHHHHHCCC--EES
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhhcC---CcEEEECCcccHHHHHHHHHCCCEEEecCCHHHHHHHHHHhCCe--EeC
Confidence 4566666554 788899999999874 34555666665 4 799999998888665567999999999974 444
Q ss_pred cCC
Q 016596 328 NVD 330 (386)
Q Consensus 328 ~vd 330 (386)
.++
T Consensus 126 ~~~ 128 (178)
T 1gml_A 126 RPE 128 (178)
T ss_dssp CGG
T ss_pred Chh
Confidence 554
No 220
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=61.73 E-value=92 Score=28.10 Aligned_cols=71 Identities=7% Similarity=0.042 Sum_probs=39.0
Q ss_pred HHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEE-EE-ecCC-cc--hHHHHHhcC--CCEEE
Q 016596 233 QYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLI-LY-ASGS-GG--LLERLALTG--VDVVS 305 (386)
Q Consensus 233 ~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~-~H-~cG~-~~--~l~~l~e~g--~d~l~ 305 (386)
+.+.+.|+.-|.+.+...+.+..+.. ..+.+.++++.+++.. +...+ +. +.+. .+ .++.|++.| ++-++
T Consensus 43 ~~l~~~G~~ei~l~g~~~~~yG~~~~---~~~~l~~Ll~~l~~~~-gi~~ir~~~~~p~~l~~e~l~~l~~~g~~~~~l~ 118 (304)
T 2qgq_A 43 EDLLKEGKKEIILVAQDTTSYGIDLY---RKQALPDLLRRLNSLN-GEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFD 118 (304)
T ss_dssp HHHHHTTCCEEEEECTTGGGTTHHHH---SSCCHHHHHHHHHTSS-SSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEE
T ss_pred HHHHHCCCcEEEEEeEcccccCCCCC---cHHHHHHHHHHHHhcC-CCcEEEEeeeecccCCHHHHHHHHhCCCCccEEE
Confidence 34556788887766532222222211 1356788888888752 34322 22 1222 12 478888988 77776
Q ss_pred cC
Q 016596 306 LD 307 (386)
Q Consensus 306 ~d 307 (386)
+.
T Consensus 119 i~ 120 (304)
T 2qgq_A 119 VP 120 (304)
T ss_dssp CC
T ss_pred Ee
Confidence 53
No 221
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=60.92 E-value=53 Score=30.41 Aligned_cols=107 Identities=20% Similarity=0.271 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEe
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYA 286 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~ 286 (386)
++.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++ -=..+..++++++++.. +.++.+-+
T Consensus 139 I~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGsle-nr~r~~~eiv~avr~~v-~~pv~vri 216 (338)
T 1z41_A 139 VKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPE-NRYRFLREIIDEVKQVW-DGPLFVRV 216 (338)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHH-HHHHHHHHHHHHHHHHC-CSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchh-hhHHHHHHHHHHHHHHc-CCcEEEEe
Confidence 333445555666777889999998754221 1334421 11 11234567777777654 56788776
Q ss_pred cCC------cc------hHHHHHhcCCCEEEcCCC------------CC---HHHHHHHhCCCeeEEecC
Q 016596 287 SGS------GG------LLERLALTGVDVVSLDWT------------VD---MAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 287 cG~------~~------~l~~l~e~g~d~l~~d~~------------~d---l~e~~~~~g~~~~l~G~v 329 (386)
..+ +. +...+.+.|+|.+++... .+ +.++++.++-.+...|+|
T Consensus 217 s~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi 286 (338)
T 1z41_A 217 SASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMI 286 (338)
T ss_dssp ECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSC
T ss_pred cCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCC
Confidence 542 11 235667889999875211 12 346677775444445555
No 222
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=60.67 E-value=24 Score=35.17 Aligned_cols=51 Identities=24% Similarity=0.220 Sum_probs=37.1
Q ss_pred hHHHHHhcCCCEEEcCCCC--------CHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHc
Q 016596 292 LLERLALTGVDVVSLDWTV--------DMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKA 352 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d~~~--------dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~ 352 (386)
+.+.|.+.|+|++-+|... -++.+|+.+++-..+.|||-+ . +.++.+++.+
T Consensus 285 R~~aLv~AGvD~iviD~ahGhs~~v~~~i~~ik~~~p~~~viaGNVaT------~----e~a~~Li~aG 343 (556)
T 4af0_A 285 RLKLLAEAGLDVVVLDSSQGNSVYQIEFIKWIKQTYPKIDVIAGNVVT------R----EQAAQLIAAG 343 (556)
T ss_dssp HHHHHHHTTCCEEEECCSCCCSHHHHHHHHHHHHHCTTSEEEEEEECS------H----HHHHHHHHHT
T ss_pred HHHHHHhcCCcEEEEeccccccHHHHHHHHHHHhhCCcceEEeccccC------H----HHHHHHHHcC
Confidence 4688899999999887541 357788888887788999854 3 4455566654
No 223
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=60.52 E-value=86 Score=27.34 Aligned_cols=124 Identities=10% Similarity=0.101 Sum_probs=73.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec------CCc----c-hHH
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS------GSG----G-LLE 294 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c------G~~----~-~l~ 294 (386)
+.+.+.++...+.|++.+.+.-....-.+.+...+.+...++++.+.+++. |+.+.+|.. |+. . ...
T Consensus 93 ~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lE~~n~~~~~~~~~~~~~~~~~ 170 (269)
T 3ngf_A 93 DNVDIALHYALALDCRTLHAMSGITEGLDRKACEETFIENFRYAADKLAPH--GITVLVEPLNTRNMPGYFIVHQLEAVG 170 (269)
T ss_dssp HHHHHHHHHHHHTTCCEEECCBCBCTTSCHHHHHHHHHHHHHHHHHHHGGG--TCEEEECCCCTTTSTTBSCCCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEccCCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEeeCCcccCccchhcCHHHHHH
Confidence 334455666777899988764332223555666677788999999999887 678888852 221 1 234
Q ss_pred HHHhcCCC--EEEcC------CCCCHHHHHHHhCCCeeEE--ecCCcC-cc-CCCHHHHHHHHHHHHHHcC
Q 016596 295 RLALTGVD--VVSLD------WTVDMAEGRRRLGPDVAVQ--GNVDPG-AL-FGSKDFITNRINDTVRKAG 353 (386)
Q Consensus 295 ~l~e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l~--G~vd~~-~l-~gt~eev~~~v~~~i~~~~ 353 (386)
.+.+++.. .+.+| ...|+.+..+.+++++..+ -+.+.. .+ .|+.+ -+.+.+.++..+
T Consensus 171 l~~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~~r~~~G~G~id--~~~~~~~L~~~g 239 (269)
T 3ngf_A 171 LVKRVNRPNVAVQLDLYHAQIMDGDLTRLIEKMNGAFSHVQIASVPDRHEPDEGELN--YPYLFSVLESVG 239 (269)
T ss_dssp HHHHHCCTTEEEEEEHHHHHHHTCCHHHHHHHTTTSEEEEEECCTTTCCCTTSSSBC--HHHHHHHHHHTT
T ss_pred HHHHhCCCCCCeEEEhhhHHhhCCCHHHHHHHhhhhEEEEEEecCCCCCCCCCCccC--HHHHHHHHHHcC
Confidence 45555533 23344 1358999989998875442 111111 22 44432 345566666666
No 224
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=60.37 E-value=50 Score=29.80 Aligned_cols=69 Identities=16% Similarity=0.193 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++.+ +.+.+...+ ++.++.++.+ -+ ....+.|
T Consensus 21 l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~--------~~~~~~~~g--vi~Gvg~~~t~~ai~la~~A~~~G 90 (286)
T 2r91_A 21 FANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELT--------DAATSAARR--VIVQVASLNADEAIALAKYAESRG 90 (286)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHH--------HHHHHHCSS--EEEECCCSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHH--------HHHHHHhCC--EEEeeCCCCHHHHHHHHHHHHhcC
Confidence 345566678899999998877764 68888766543 333333223 7788776553 23 4456789
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 91 adavlv 96 (286)
T 2r91_A 91 AEAVAS 96 (286)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998754
No 225
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=60.27 E-value=74 Score=29.98 Aligned_cols=106 Identities=12% Similarity=0.096 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEecC
Q 016596 223 KFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYASG 288 (386)
Q Consensus 223 ~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG 288 (386)
.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++ -=..+..++++++++..+.-++.+-+..
T Consensus 164 ~~i~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGsle-nR~r~~~eiv~aVr~avg~~~V~vrls~ 242 (376)
T 1icp_A 164 QIVNEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGGSLE-NRCRFALEIVEAVANEIGSDRVGIRISP 242 (376)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHH-HHHHHHHHHHHHHHHHHCGGGEEEEECT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCccHH-HhHHHHHHHHHHHHHHhcCCceEEEecc
Confidence 3444555566777889999998754321 1333321 11 1123455666666654321166665542
Q ss_pred ---------Cc-----c-hHHHHHhcCCCEEEcCCC------------CCHHHHHHHhCCCeeEEecC
Q 016596 289 ---------SG-----G-LLERLALTGVDVVSLDWT------------VDMAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 289 ---------~~-----~-~l~~l~e~g~d~l~~d~~------------~dl~e~~~~~g~~~~l~G~v 329 (386)
.. . +...+.+.|++.+++... .-+.++|+.++.-++..|++
T Consensus 243 ~~~~~g~~~~~~~~~~~~la~~le~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i 310 (376)
T 1icp_A 243 FAHYNEAGDTNPTALGLYMVESLNKYDLAYCHVVEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGY 310 (376)
T ss_dssp TCCTTTCCCSCHHHHHHHHHHHHGGGCCSEEEEECCSCCC------CCCCSHHHHHHCCSCEEEESSC
T ss_pred ccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEcCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCC
Confidence 11 1 236667889999876321 12467788886555556665
No 226
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=59.01 E-value=49 Score=29.94 Aligned_cols=69 Identities=12% Similarity=0.066 Sum_probs=45.2
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hH---HHHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LL---ERLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l---~~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++ +++.+.+..++ ++.++.++.+ -+ ....+.|
T Consensus 22 l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~--------v~~~~~~~~~g--ViaGvg~~~t~~ai~la~~A~~~G 91 (288)
T 2nuw_A 22 LKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQ--------NLNALYDVTHK--LIFQVGSLNLNDVMELVKFSNEMD 91 (288)
T ss_dssp HHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHH--------HHHHHTTTCSC--EEEECCCSCHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH--------HHHHHHHHhCC--eEEeeCCCCHHHHHHHHHHHHhcC
Confidence 344555677899999998877764 688876555 44444443323 7788776553 23 4456789
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 92 adavlv 97 (288)
T 2nuw_A 92 ILGVSS 97 (288)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 998744
No 227
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=58.96 E-value=1e+02 Score=27.68 Aligned_cols=127 Identities=15% Similarity=0.085 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCC-CHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe----cCCc-c--hHHHHH
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATEL-SPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA----SGSG-G--LLERLA 297 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~i-Sp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~----cG~~-~--~l~~l~ 297 (386)
+-.++.++...++|+|++.+.-|.-.-. |. +=+.-|++++.+ . .|++++. .|.. . .+..+.
T Consensus 75 ~~ai~la~~A~~~Gadavlv~~P~y~~~~~~----~~l~~~f~~va~---~----lPiilYn~P~~tg~~l~~~~~~~La 143 (283)
T 2pcq_A 75 PQAEGALLEAKAAGAMALLATPPRYYHGSLG----AGLLRYYEALAE---K----MPLFLYHVPQNTKVDLPLEAVEALA 143 (283)
T ss_dssp HHHHHHHHHHHHHTCSEEEECCCCTTGGGTT----THHHHHHHHHHH---H----SCEEEEECHHHHCCCCCHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCCEEEecCCcCCCCCCH----HHHHHHHHHHhc---C----CCEEEEeCccccCcCCCHHHHHHHh
Confidence 3445666677789999998866653222 32 334457777777 3 4777765 3432 2 244455
Q ss_pred hcCCCEEEc-CCCCCHHHHHHH--hCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHH
Q 016596 298 LTGVDVVSL-DWTVDMAEGRRR--LGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENV 374 (386)
Q Consensus 298 e~g~d~l~~-d~~~dl~e~~~~--~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni 374 (386)
+.+ +++.+ +...|+....+. .+++..+..|-|... ...+. .|+.|+|-+.+|- -|+-+
T Consensus 144 ~~p-nivgiKdssgd~~~~~~~~~~~~~f~v~~G~d~~~------------~~~l~-~G~~G~is~~~n~-----~P~~~ 204 (283)
T 2pcq_A 144 PHP-NVLGIKDSSGDLSRIAFYQARLQEFRVYTGHAPTF------------LGALA-LGAEGGILAAANL-----APRAY 204 (283)
T ss_dssp TST-TEEEEEECSCCHHHHHHHHHHCSSCEEEECCGGGH------------HHHHH-TTCCEEECGGGGT-----CHHHH
T ss_pred cCC-CEEEEEECCCCHHHHHHHHhcCCCEEEEECcHHHH------------HHHHH-cCCCEEEeCHHHh-----CHHHH
Confidence 543 56666 444566554433 455555555444321 11222 2445677665543 34556
Q ss_pred HHHHHHHH
Q 016596 375 AHFFEVAK 382 (386)
Q Consensus 375 ~a~~~a~~ 382 (386)
.+|+++++
T Consensus 205 ~~l~~a~~ 212 (283)
T 2pcq_A 205 RALLDHFR 212 (283)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 66666554
No 228
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=58.90 E-value=63 Score=29.92 Aligned_cols=96 Identities=8% Similarity=0.036 Sum_probs=59.8
Q ss_pred HHHHHHHHHHhhCCCCcEEEEecC-Cc-c-hHHHHHhcCCC---EE--EcCCCCCHHHHHHHhC--CCeeEEecCCcCcc
Q 016596 265 YLKQIVDTVKQTHPDLSLILYASG-SG-G-LLERLALTGVD---VV--SLDWTVDMAEGRRRLG--PDVAVQGNVDPGAL 334 (386)
Q Consensus 265 ~~k~l~~~i~~~~~~~~~~~H~cG-~~-~-~l~~l~e~g~d---~l--~~d~~~dl~e~~~~~g--~~~~l~G~vd~~~l 334 (386)
.++..++..++. |.|+++|+-. .. . .++.+.+.|++ ++ +.+...|++.+++.+. -.+.+-|.+ ..
T Consensus 169 ~f~aq~~~A~~~--glPViiH~r~g~~a~~~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l~~G~~i~~~g~~---t~ 243 (330)
T 3pnz_A 169 TIRAVARAHHET--KAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVAKTGAFMSFDGIA---KI 243 (330)
T ss_dssp HHHHHHHHHHHH--CCCEEEECGGGCCHHHHHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHHTTTCEEEECCTT---CT
T ss_pred HHHHHHHHHHHH--CCeEEEeCCCCcChHHHHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHHHcCcEEEEccCc---cc
Confidence 445666677776 6899999742 11 1 47778888765 22 4443468888888754 334443321 11
Q ss_pred -CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 335 -FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 335 -~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
+.+.++-.+.++++++.+-..+.++++++.-
T Consensus 244 ~~~~~~~~~~~l~~lv~~g~~drilleTD~p~ 275 (330)
T 3pnz_A 244 KYAPESARIAAILYLVSEGFEDQILVSGDTAR 275 (330)
T ss_dssp TTCCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred CCCChHHHHHHHHHHHHcCCCCeEEEeCCCCC
Confidence 2334555667788887655568999999863
No 229
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=58.85 E-value=39 Score=31.57 Aligned_cols=107 Identities=15% Similarity=0.292 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCC-CCcEEEE
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHP-DLSLILY 285 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~-~~~~~~H 285 (386)
++.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++.- ..+..++++++++..+ +.++.+-
T Consensus 138 I~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGGslenR-~rf~~eiv~aVr~avg~d~pv~vR 216 (343)
T 3kru_A 138 IKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGNSIENR-ARFLIEVIDEVRKNWPENKPIFVR 216 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHH-THHHHHHHHHHHHTSCTTSCEEEE
T ss_pred HHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhccchHhH-HHHHHHHHHHHHhcCCccCCeEEE
Confidence 444445555566667789999998863222 1334321 1111 3456778888877632 4567765
Q ss_pred ecCC-------c-c----hHHHHHhcCCCEEEcCC------------CCC---HHHHHHHhCCCeeEEecC
Q 016596 286 ASGS-------G-G----LLERLALTGVDVVSLDW------------TVD---MAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 286 ~cG~-------~-~----~l~~l~e~g~d~l~~d~------------~~d---l~e~~~~~g~~~~l~G~v 329 (386)
+..+ . . +...+.+. +|.+++.. ..+ ..++|+.++--+...|++
T Consensus 217 ls~~~~~~~g~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi 286 (343)
T 3kru_A 217 VSADDYMEGGINIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLI 286 (343)
T ss_dssp EECCCSSTTSCCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSC
T ss_pred eechhhhccCccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeee
Confidence 5432 1 1 23566677 99887731 012 246677775444445555
No 230
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=58.62 E-value=51 Score=29.91 Aligned_cols=69 Identities=12% Similarity=0.058 Sum_probs=44.9
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHH---HHHhcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLE---RLALTG 300 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~---~l~e~g 300 (386)
+.++++.+++.|++++++..+.+. .+|.+..++ +++.+.+...+ ++.++.++.+ -++ ...+.|
T Consensus 22 l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~--------v~~~~~~~~~g--viaGvg~~~t~~ai~la~~A~~~G 91 (293)
T 1w3i_A 22 LKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLE--------NLKAVYDVTNK--IIFQVGGLNLDDAIRLAKLSKDFD 91 (293)
T ss_dssp HHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHH--------HHHHHHTTCSC--EEEECCCSCHHHHHHHHHHGGGSC
T ss_pred HHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH--------HHHHHHHHcCC--EEEecCCCCHHHHHHHHHHHHhcC
Confidence 344555677899999998877764 688876554 44555444323 7788877653 233 445689
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
+|++.+
T Consensus 92 adavlv 97 (293)
T 1w3i_A 92 IVGIAS 97 (293)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 997743
No 231
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=58.60 E-value=1.2e+02 Score=28.38 Aligned_cols=107 Identities=7% Similarity=0.038 Sum_probs=57.1
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEec
Q 016596 222 RKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYAS 287 (386)
Q Consensus 222 ~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c 287 (386)
+.+.+-..+.++...++|.|+|-+.-.-+ .|+||.. +++ =..+..++++++++..+.-++.+-+.
T Consensus 157 ~~~i~~f~~aA~~a~~aGfDgVeih~a~gYLl~qFlsp~~N~R~D~yGGslen-r~r~~~eiv~avr~~vg~~pv~vris 235 (365)
T 2gou_A 157 AQVIADYRQAALNAMEAGFDGIELHAANGYLINQFIDSEANNRSDEYGGSLEN-RLRFLDEVVAALVDAIGAERVGVRLA 235 (365)
T ss_dssp HHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSGGGCCCCSTTSSSHHH-HTHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHcCCCEEEEecccchhHhhccCCCccCcCcccCcchhh-hHHHHHHHHHHHHHHcCCCcEEEEEc
Confidence 33444455566667889999998853221 1334421 111 12244566666665422116666443
Q ss_pred CC---------cc------hHHHHHhcCCCEEEcCCC-----C--C---HHHHHHHhCCCeeEEecC
Q 016596 288 GS---------GG------LLERLALTGVDVVSLDWT-----V--D---MAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 288 G~---------~~------~l~~l~e~g~d~l~~d~~-----~--d---l~e~~~~~g~~~~l~G~v 329 (386)
.+ .. +...+.+.|+|.+++... . . +.++++.++.-++..|+|
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi 302 (365)
T 2gou_A 236 PLTTLNGTVDADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPDTPVSFKRALREAYQGVLIYAGRY 302 (365)
T ss_dssp SSCCTTSCCCSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSC
T ss_pred cccccCCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCCccHHHHHHHHHHCCCcEEEeCCC
Confidence 21 11 135667789999877432 1 1 456777775444445555
No 232
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=58.42 E-value=39 Score=31.93 Aligned_cols=67 Identities=19% Similarity=0.191 Sum_probs=42.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.++.++++|+|+|.+ |...+ .+ +...+.++.+++..++.+++...+........+.+.|+|.+.+
T Consensus 110 ~~~~~~lieaGvd~I~i-dta~G--~~--------~~~~~~I~~ik~~~p~v~Vi~G~v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 110 EERVKALVEAGVDVLLI-DSSHG--HS--------EGVLQRIRETRAAYPHLEIIGGNVATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHHHTTCSEEEE-ECSCT--TS--------HHHHHHHHHHHHHCTTCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHhCCCCEEEE-eCCCC--CC--------HHHHHHHHHHHHhcCCCceEeeeeCCHHHHHHHHHcCCCEEEE
Confidence 45677888999999876 32221 12 1233445566665445676665555444567788899999876
No 233
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=57.30 E-value=53 Score=28.48 Aligned_cols=88 Identities=13% Similarity=0.139 Sum_probs=49.2
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEE
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVS 305 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~ 305 (386)
.+.++.+.++|++.|.+.|..++ .-+ +...+++..++ .. ++|++ -..|-.+ .++.+.+.|+|.+.
T Consensus 33 ~~~a~~~~~~Gad~i~v~d~~~~~~~~---------~~~~~~i~~i~-~~-~ipvi-~~Ggi~~~~~~~~~~~~Gad~V~ 100 (241)
T 1qo2_A 33 VELVEKLIEEGFTLIHVVDLSNAIENS---------GENLPVLEKLS-EF-AEHIQ-IGGGIRSLDYAEKLRKLGYRRQI 100 (241)
T ss_dssp HHHHHHHHHTTCCCEEEEEHHHHHHCC---------CTTHHHHHHGG-GG-GGGEE-EESSCCSHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHcCCCEEEEecccccccCC---------chhHHHHHHHH-hc-CCcEE-EECCCCCHHHHHHHHHCCCCEEE
Confidence 34566677899999998874321 011 11123333433 21 46743 2333333 36778889999987
Q ss_pred cCCC----CC-HHHHHHHhCCCeeEEecCCc
Q 016596 306 LDWT----VD-MAEGRRRLGPDVAVQGNVDP 331 (386)
Q Consensus 306 ~d~~----~d-l~e~~~~~g~~~~l~G~vd~ 331 (386)
+... .+ +.++ +.+|+++.+ ++|.
T Consensus 101 lg~~~l~~p~~~~~~-~~~g~~i~~--~~d~ 128 (241)
T 1qo2_A 101 VSSKVLEDPSFLKSL-REIDVEPVF--SLDT 128 (241)
T ss_dssp ECHHHHHCTTHHHHH-HTTTCEEEE--EEEE
T ss_pred ECchHhhChHHHHHH-HHcCCcEEE--EEEe
Confidence 7532 23 6677 778853333 3554
No 234
>1xwy_A DNAse TATD, deoxyribonuclease TATD; TIM barrael, zinc ION, structural genomics, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.1.9.12
Probab=57.21 E-value=48 Score=28.97 Aligned_cols=94 Identities=7% Similarity=-0.045 Sum_probs=56.3
Q ss_pred hHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCC---C-EEEcCCCCCHHHHHHHhCCC--eeEEecCCcCcc
Q 016596 262 SLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGV---D-VVSLDWTVDMAEGRRRLGPD--VAVQGNVDPGAL 334 (386)
Q Consensus 262 ~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~---d-~l~~d~~~dl~e~~~~~g~~--~~l~G~vd~~~l 334 (386)
-.+.+++.++.+++. +.|+++|+-+... .++.+.+.|. . +++.. ..+...+++.+... +.+.|.+. .
T Consensus 110 q~~~f~~~l~~a~~~--~lpv~iH~~~a~~~~~~il~~~~~~~~~~v~H~~-~g~~~~~~~~~~~g~yi~~~g~~~---~ 183 (264)
T 1xwy_A 110 QERAFVAQLRIAADL--NMPVFMHCRDAHERFMTLLEPWLDKLPGAVLHCF-TGTREEMQACVAHGIYIGITGWVC---D 183 (264)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHGGGGGGSSCEEECSC-CCCHHHHHHHHHTTCEEEECGGGG---C
T ss_pred HHHHHHHHHHHHHHh--CCcEEEEcCCchHHHHHHHHhcCCCCCcEEEEcc-CCCHHHHHHHHHCCeEEEECcccc---C
Confidence 356677778888887 6899999865544 4677777753 3 44542 23676666655432 33333221 0
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 335 FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
+.+.+ .++++++..+..++++++++..
T Consensus 184 ~~~~~----~l~~~~~~~~~drll~eTD~P~ 210 (264)
T 1xwy_A 184 ERRGL----ELRELLPLIPAEKLLIETDAPY 210 (264)
T ss_dssp TTTSH----HHHHHGGGSCGGGEEECCCTTS
T ss_pred CcCcH----HHHHHHHhCCHHHEEEecCCCC
Confidence 22233 3455666665468999998754
No 235
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=57.19 E-value=12 Score=32.83 Aligned_cols=84 Identities=20% Similarity=0.092 Sum_probs=49.6
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEEEc
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVVSL 306 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l~~ 306 (386)
+.++.+.++|++.+.+.+-.+.+-. .+.. +++..+++.. +.|++.| |... .++.+.+.|+|.+.+
T Consensus 35 ~~a~~~~~~Gad~i~v~~~d~~~~~--------~~~~-~~i~~i~~~~-~ipv~v~--ggi~~~~~~~~~l~~Gad~V~l 102 (244)
T 2y88_A 35 DAALGWQRDGAEWIHLVDLDAAFGR--------GSNH-ELLAEVVGKL-DVQVELS--GGIRDDESLAAALATGCARVNV 102 (244)
T ss_dssp HHHHHHHHTTCSEEEEEEHHHHTTS--------CCCH-HHHHHHHHHC-SSEEEEE--SSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEcCcccccC--------CChH-HHHHHHHHhc-CCcEEEE--CCCCCHHHHHHHHHcCCCEEEE
Confidence 4455677899999998752221111 0111 3334444433 4676665 4332 478888999999987
Q ss_pred CCC--CC---HHHHHHHhCCCeeE
Q 016596 307 DWT--VD---MAEGRRRLGPDVAV 325 (386)
Q Consensus 307 d~~--~d---l~e~~~~~g~~~~l 325 (386)
... .+ +.++.+.+|.++.+
T Consensus 103 g~~~l~~p~~~~~~~~~~g~~~~~ 126 (244)
T 2y88_A 103 GTAALENPQWCARVIGEHGDQVAV 126 (244)
T ss_dssp CHHHHHCHHHHHHHHHHHGGGEEE
T ss_pred CchHhhChHHHHHHHHHcCCCEEE
Confidence 643 23 56677778765443
No 236
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=56.53 E-value=62 Score=27.38 Aligned_cols=120 Identities=12% Similarity=0.072 Sum_probs=61.9
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC--
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW-- 308 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~-- 308 (386)
.++..+++|+|++.+.. .. .++++.+++. |.+++.- |.+..-+....+.|+|.+.+..
T Consensus 72 ~i~~a~~~Gad~V~~~~-----~~------------~~~~~~~~~~--g~~~~~g-~~t~~e~~~a~~~G~d~v~v~~t~ 131 (212)
T 2v82_A 72 QVDALARMGCQLIVTPN-----IH------------SEVIRRAVGY--GMTVCPG-CATATEAFTALEAGAQALKIFPSS 131 (212)
T ss_dssp HHHHHHHTTCCEEECSS-----CC------------HHHHHHHHHT--TCEEECE-ECSHHHHHHHHHTTCSEEEETTHH
T ss_pred HHHHHHHcCCCEEEeCC-----CC------------HHHHHHHHHc--CCCEEee-cCCHHHHHHHHHCCCCEEEEecCC
Confidence 45667789999986321 11 2345566665 3443322 4333223444678999886532
Q ss_pred CCCHH---HHHHHhC--CCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCC----CCcHHHHHHHHH
Q 016596 309 TVDMA---EGRRRLG--PDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKV----GTPEENVAHFFE 379 (386)
Q Consensus 309 ~~dl~---e~~~~~g--~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~----~tp~Eni~a~~~ 379 (386)
..++. ++++.++ -.+...|||++ +++ +++++. |-.++++++.- +.. +-|.+.++++.+
T Consensus 132 ~~g~~~~~~l~~~~~~~ipvia~GGI~~-------~~i----~~~~~~-Ga~gv~vGsai-~~~~~~~~d~~~~~~~l~~ 198 (212)
T 2v82_A 132 AFGPQYIKALKAVLPSDIAVFAVGGVTP-------ENL----AQWIDA-GCAGAGLGSDL-YRAGQSVERTAQQAAAFVK 198 (212)
T ss_dssp HHCHHHHHHHHTTSCTTCEEEEESSCCT-------TTH----HHHHHH-TCSEEEECTTT-CCTTCCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHhccCCCeEEEeCCCCH-------HHH----HHHHHc-CCCEEEEChHH-hCCCCCHHHHHHHHHHHHH
Confidence 12444 4444444 23555788854 222 333443 43356655431 111 235677777777
Q ss_pred HHHh
Q 016596 380 VAKA 383 (386)
Q Consensus 380 a~~~ 383 (386)
.+++
T Consensus 199 ~~~~ 202 (212)
T 2v82_A 199 AYRE 202 (212)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6665
No 237
>2ob3_A Parathion hydrolase; metalloenzyme, TIM barrel, nerve agents; HET: KCX BTB; 1.04A {Brevundimonas diminuta} PDB: 1psc_A* 1jgm_A* 3cak_A* 1ez2_A* 1eyw_A* 1hzy_A 1i0b_A 1i0d_A 1p6b_A* 1p6c_A* 2oql_A* 2o4q_A* 3cs2_A* 3e3h_A* 1qw7_A* 1dpm_A* 2o4m_A* 1pta_A 3c86_A* 2d2j_A ...
Probab=55.73 E-value=56 Score=30.04 Aligned_cols=100 Identities=12% Similarity=0.004 Sum_probs=58.4
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEec--CCcc--hHHHHHhcCCC-----EEEcCCCCCHHHHHHHh--CCCeeEEe-cCCc
Q 016596 264 PYLKQIVDTVKQTHPDLSLILYAS--GSGG--LLERLALTGVD-----VVSLDWTVDMAEGRRRL--GPDVAVQG-NVDP 331 (386)
Q Consensus 264 P~~k~l~~~i~~~~~~~~~~~H~c--G~~~--~l~~l~e~g~d-----~l~~d~~~dl~e~~~~~--g~~~~l~G-~vd~ 331 (386)
..++..++..++. |.|+++|+. |... .++.+.+.|++ +.|.....|.+.+++.+ |-.+.+-+ ++-+
T Consensus 148 ~~f~~q~~lA~~~--glPv~iH~~~~~r~a~e~l~iL~~~g~~~~~~~i~H~f~~~~~e~a~~~~~~G~~i~~~~~G~~t 225 (330)
T 2ob3_A 148 LVLKAAARASLAT--GVPVTTHTAASQRDGEQQAAIFESEGLSPSRVCIGHSDDTDDLSYLTALAARGYLIGLDHIPYSA 225 (330)
T ss_dssp HHHHHHHHHHHHH--CCCEEEECCGGGTHHHHHHHHHHHTTCCGGGEEECSGGGCCCHHHHHHHHHTTCEEEECCTTCCC
T ss_pred HHHHHHHHHHHHh--CCeEEEECCCCCCCHHHHHHHHHHcCcCcccEEEeCCCCCCCHHHHHHHHhCCCEEEeCCCcccc
Confidence 3456667777776 689999984 2322 35667777764 23555345787777754 44334431 2211
Q ss_pred Ccc-----------CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 332 GAL-----------FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 332 ~~l-----------~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
... ..+.+.-.+.++++++.+....++|++++..
T Consensus 226 f~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~drilleTD~p~ 270 (330)
T 2ob3_A 226 IGLEDNASASALLGIRSWQTRALLIKALIDQGYMKQILVSNDWTF 270 (330)
T ss_dssp TTCTTCHHHHHHHCSSCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred ccccccccccccccCCCHHHHHHHHHHHHHhCCCCeEEEeCCCCC
Confidence 100 0343444556777777655468899999864
No 238
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=55.72 E-value=43 Score=30.51 Aligned_cols=60 Identities=25% Similarity=0.299 Sum_probs=41.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d 307 (386)
+.++..+++|+|+|.+ |. +||+..++ .++.++. .+.+-..|+.+ .+..++++|+|++++.
T Consensus 209 ~ea~eAl~aGaD~I~L-Dn----~~~~~l~~--------av~~~~~-----~v~ieaSGGIt~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 209 DELNQAIAAKADIVML-DN----FSGEDIDI--------AVSIARG-----KVALEVSGNIDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHHHHTTCSEEEE-ES----CCHHHHHH--------HHHHHTT-----TCEEEEESSCCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHHHHcCCCEEEE-cC----CCHHHHHH--------HHHhhcC-----CceEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 4445566789999886 43 67755444 4444442 24566778776 4899999999999875
No 239
>3ngf_A AP endonuclease, family 2; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 1.80A {Brucella melitensis biovar abortus} SCOP: c.1.15.0
Probab=55.18 E-value=70 Score=27.95 Aligned_cols=91 Identities=18% Similarity=0.142 Sum_probs=48.5
Q ss_pred HHHHHhcCCCEEEcC--CCCCHHHHHHHhCCC-eeEEe-cCCcCc-------c---CCCHHHHHHHHHHHHHHcC--CCC
Q 016596 293 LERLALTGVDVVSLD--WTVDMAEGRRRLGPD-VAVQG-NVDPGA-------L---FGSKDFITNRINDTVRKAG--RWK 356 (386)
Q Consensus 293 l~~l~e~g~d~l~~d--~~~dl~e~~~~~g~~-~~l~G-~vd~~~-------l---~gt~eev~~~v~~~i~~~~--~~g 356 (386)
++.++++|++.+.+. ...+++++++.+.+. +.+.+ +.+... + ....++..+..++.++.+. |..
T Consensus 29 l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~i~~A~~lGa~ 108 (269)
T 3ngf_A 29 FRLAAEAGFGGVEFLFPYDFDADVIARELKQHNLTQVLFNMPPGDWAAGERGMAAISGREQEFRDNVDIALHYALALDCR 108 (269)
T ss_dssp HHHHHHTTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCSCTTTTCCBCTTCTTCHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHcCCCEEEecCCccCCHHHHHHHHHHcCCcEEEEecCCCccccCCCCcCCCccHHHHHHHHHHHHHHHHHHcCCC
Confidence 566678999998763 234677776665422 33322 222111 1 1334566777888887765 444
Q ss_pred -eEEecCCCCCCCCc-H-------HHHHHHHHHHHhhc
Q 016596 357 -HILNLGHGIKVGTP-E-------ENVAHFFEVAKAIR 385 (386)
Q Consensus 357 -~Ils~gc~i~~~tp-~-------Eni~a~~~a~~~yg 385 (386)
.++.+| .+.+.+ . ++++.+.+.++++|
T Consensus 109 ~v~~~~g--~~~~~~~~~~~~~~~~~l~~l~~~a~~~G 144 (269)
T 3ngf_A 109 TLHAMSG--ITEGLDRKACEETFIENFRYAADKLAPHG 144 (269)
T ss_dssp EEECCBC--BCTTSCHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred EEEEccC--CCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 445466 444433 3 33444444555554
No 240
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=55.17 E-value=84 Score=29.23 Aligned_cols=105 Identities=14% Similarity=0.197 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHhCCCEEEEecC----------CcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-cCCc----
Q 016596 227 SMAKYVQYQADNGAQAVQIFDS----------WAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-SGSG---- 290 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~----------~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-cG~~---- 290 (386)
...+.++.+.++|+|+|-+.-. +++ ++. =.....++++++++.. +.|+.+-+ -|..
T Consensus 71 ~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~-------~~~~~~eiv~av~~~v-~~PV~vKiR~g~~~~~~ 142 (350)
T 3b0p_A 71 SLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLL-------DLARVREILKAMGEAV-RVPVTVKMRLGLEGKET 142 (350)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGG-------CHHHHHHHHHHHHHHC-SSCEEEEEESCBTTCCC
T ss_pred HHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHh-------CHHHHHHHHHHHHHHh-CCceEEEEecCcCcccc
Confidence 3444556667889999887532 111 111 1234455666666643 56877732 1211
Q ss_pred --c---hHHHHHhcCCCEEEcCCC----------------CC---HHHHHHHhC-CCeeEEecCCcCccCCCHHHHHHHH
Q 016596 291 --G---LLERLALTGVDVVSLDWT----------------VD---MAEGRRRLG-PDVAVQGNVDPGALFGSKDFITNRI 345 (386)
Q Consensus 291 --~---~l~~l~e~g~d~l~~d~~----------------~d---l~e~~~~~g-~~~~l~G~vd~~~l~gt~eev~~~v 345 (386)
. +...+.+.|++.+.+... .+ +.++++.++ -.+...|+| .|++++.+..
T Consensus 143 ~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI------~s~eda~~~l 216 (350)
T 3b0p_A 143 YRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGI------RSLEEALFHL 216 (350)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSC------CSHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCc------CCHHHHHHHH
Confidence 1 236667899998876431 13 346666663 223445555 4577776654
No 241
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=55.16 E-value=1.3e+02 Score=27.64 Aligned_cols=64 Identities=19% Similarity=0.278 Sum_probs=37.5
Q ss_pred HHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEc
Q 016596 235 QADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSL 306 (386)
Q Consensus 235 ~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~ 306 (386)
..+.|+..|.+...- .|..+. -.+++.++++.+++.. +..+.+ +.|... .+..|.+.|++.+++
T Consensus 103 ~~~~G~~~i~l~gGe----~p~~~~--~~~~~~~l~~~ik~~~-~i~i~~-s~g~~~~e~l~~L~~aG~~~i~i 168 (350)
T 3t7v_A 103 LKGAGFHMVDLTMGE----DPYYYE--DPNRFVELVQIVKEEL-GLPIMI-SPGLMDNATLLKAREKGANFLAL 168 (350)
T ss_dssp HTTSCCSEEEEEECC----CHHHHH--STHHHHHHHHHHHHHH-CSCEEE-ECSSCCHHHHHHHHHTTEEEEEC
T ss_pred HHHCCCCEEEEeeCC----CCcccc--CHHHHHHHHHHHHhhc-CceEEE-eCCCCCHHHHHHHHHcCCCEEEE
Confidence 345788887763211 343220 1345677788887653 344322 345444 489999999987765
No 242
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=54.92 E-value=1.3e+02 Score=27.54 Aligned_cols=137 Identities=15% Similarity=0.107 Sum_probs=79.5
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-cCCcch--H----HHHHhcCCCE
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-SGSGGL--L----ERLALTGVDV 303 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-cG~~~~--l----~~l~e~g~d~ 303 (386)
.++.+.+.++++|.+.+..++- +.+ .-..+...+++. |.+++.|. |.+.+. + ..+.+.|++-
T Consensus 34 ~~~~L~~~~pd~vsVT~~~~g~--~r~-------~t~~~a~~i~~~--g~~~i~Hltc~~~~~~~l~~~L~~~~~~GI~n 102 (310)
T 3apt_A 34 TLEELKAFRPAFVSITYGAMGS--TRE-------RSVAWAQRIQSL--GLNPLAHLTVAGQSRKEVAEVLHRFVESGVEN 102 (310)
T ss_dssp HHHHHGGGCCSEEEECCCSTTC--SHH-------HHHHHHHHHHHT--TCCBCEEEECTTSCHHHHHHHHHHHHHTTCCE
T ss_pred HHHHHhcCCCCEEEEecCCCCC--cch-------hHHHHHHHHHHh--CCCeEEEeecCCCCHHHHHHHHHHHHHCCCCE
Confidence 3444556689999988755442 111 123456666654 56778885 655431 3 3445679873
Q ss_pred -EEc--CC----------------CCCH-HHHHHHhCCCeeEEecCCcCc-c-CCCHHHHHHHHHHHHHHcCCCCeEEec
Q 016596 304 -VSL--DW----------------TVDM-AEGRRRLGPDVAVQGNVDPGA-L-FGSKDFITNRINDTVRKAGRWKHILNL 361 (386)
Q Consensus 304 -l~~--d~----------------~~dl-~e~~~~~g~~~~l~G~vd~~~-l-~gt~eev~~~v~~~i~~~~~~g~Ils~ 361 (386)
+-+ |. ..++ +.+++..|++.++.+...|.. . ..+.+.-.++.++-++.+. -|+++
T Consensus 103 iLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGA--df~iT- 179 (310)
T 3apt_A 103 LLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGL--DFAIT- 179 (310)
T ss_dssp EEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHC--SEEEE-
T ss_pred EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCC--CEEEe-
Confidence 322 11 0122 234444475578877777754 3 4566655555666666653 47776
Q ss_pred CCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 362 GHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 362 gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
+.--..+.+..+++.+++-|
T Consensus 180 ----Q~ffD~~~~~~f~~~~r~~G 199 (310)
T 3apt_A 180 ----QLFFNNAHYFGFLERARRAG 199 (310)
T ss_dssp ----CCCSCHHHHHHHHHHHHHTT
T ss_pred ----cccCCHHHHHHHHHHHHHcC
Confidence 34457788888888887654
No 243
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=54.84 E-value=1e+02 Score=26.57 Aligned_cols=164 Identities=15% Similarity=0.172 Sum_probs=92.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCC-c-CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC--
Q 016596 213 QPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSW-A-TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG-- 288 (386)
Q Consensus 213 ~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~-~-~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG-- 288 (386)
+|+...+.++ .+.+.++...+.|++.+.+.-.. . +-.+.+.-.+.+...++++.+.++++ |+.+.+|...
T Consensus 74 d~~~r~~~~~----~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lE~~~~~ 147 (275)
T 3qc0_A 74 DASGREKAID----DNRRAVDEAAELGADCLVLVAGGLPGGSKNIDAARRMVVEGIAAVLPHARAA--GVPLAIEPLHPM 147 (275)
T ss_dssp SHHHHHHHHH----HHHHHHHHHHHTTCSCEEEECBCCCTTCCCHHHHHHHHHHHHHHHHHHHHHH--TCCEEECCCCGG
T ss_pred CHHHHHHHHH----HHHHHHHHHHHhCCCEEEEeeCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEeECCCc
Confidence 4444444443 44455666777899988765321 1 12455666677888999999999887 5788888632
Q ss_pred -----C---c-c-hHHHHHhcCCC-EEEcC-----CCCCHHHHHHHhC--CCeeEE--ec-CCc------C--cc-CCCH
Q 016596 289 -----S---G-G-LLERLALTGVD-VVSLD-----WTVDMAEGRRRLG--PDVAVQ--GN-VDP------G--AL-FGSK 338 (386)
Q Consensus 289 -----~---~-~-~l~~l~e~g~d-~l~~d-----~~~dl~e~~~~~g--~~~~l~--G~-vd~------~--~l-~gt~ 338 (386)
. + . ..+.+.+++-. .+.+| ...|+.+.-+.++ +++..+ -+ ..+ . .+ .|..
T Consensus 148 ~~~~~~~~~~~~~~~~l~~~~~~~vg~~~D~~h~~~~~d~~~~l~~~~~~~~i~~vH~~D~~~~~~~~~~~r~~~G~G~i 227 (275)
T 3qc0_A 148 YAADRACVNTLGQALDICETLGPGVGVAIDVYHVWWDPDLANQIARAGKMKAILAHHICDWLVPTKDMLTDRGMMGDGVI 227 (275)
T ss_dssp GTTTTBSCCCHHHHHHHHHHHCTTEEEEEEHHHHTTCTTHHHHHHHHHHTTCEEEEEECBCCSSCCCSSSBCBCTTSSCC
T ss_pred ccCCccccCCHHHHHHHHHHhCcccEEEEEhhhheeCCCHHHHHHHcCccceEEEEEecCCCCCcccccCCCcCCCCCcc
Confidence 1 1 1 13444444531 12232 2357877777776 564432 11 111 1 12 3443
Q ss_pred HHHHHHHHHHHHHcC-CCCeEEecCCC--CCCCCcHHHHHHHHHHHHhh
Q 016596 339 DFITNRINDTVRKAG-RWKHILNLGHG--IKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 339 eev~~~v~~~i~~~~-~~g~Ils~gc~--i~~~tp~Eni~a~~~a~~~y 384 (386)
+ -+.+.+.++..+ .|.+++=.-.. .....|.|.++.-++..+++
T Consensus 228 d--~~~~~~~L~~~gy~g~~~~E~~~~~~~~~~~~~~~~~~~~~~l~~~ 274 (275)
T 3qc0_A 228 D--LKGIRRRIEAAGFHGAQEVEIFSADNWWKRPADEVIATCVERYRNC 274 (275)
T ss_dssp C--HHHHHHHHHHTTCCCCEEECCCBTTTGGGSCHHHHHHHHHHHHHHH
T ss_pred C--HHHHHHHHHHcCCCceEEEEecCccccccCCHHHHHHHHHHHhcCC
Confidence 2 345556666666 55555532211 11246888888888888765
No 244
>3rcm_A TATD family hydrolase; HET: CIT; 2.05A {Pseudomonas putida}
Probab=53.91 E-value=54 Score=29.66 Aligned_cols=94 Identities=16% Similarity=0.054 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCC---C-EEEcCCCCCHHHHHHHhCCCeeEEecCCcCccC-C
Q 016596 263 LPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGV---D-VVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALF-G 336 (386)
Q Consensus 263 ~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~---d-~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~-g 336 (386)
...+++.++.+++. +.|+++|+-.... .++.+.+.+. . +++. ...+.+++++.+.-.+-+ | +.....+ .
T Consensus 113 ~~~F~~ql~lA~e~--~lPv~iH~r~a~~~~l~il~~~~~~~~~~V~H~-fsG~~e~a~~~l~~G~yi-s-~~g~i~~~k 187 (287)
T 3rcm_A 113 EKALEAQLTLAAQL--RLPVFLHERDASERLLAILKDYRDHLTGAVVHC-FTGEREALFAYLDLDLHI-G-ITGWICDER 187 (287)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHTTGGGCSCEEECS-CCCCHHHHHHHHHTTCEE-E-ECGGGGCTT
T ss_pred HHHHHHHHHHHHHh--CCCEEEEcCCcHHHHHHHHHHcCCCCCeEEEEe-CCCCHHHHHHHHHCCcEE-E-ECchhcccc
Confidence 45667777878877 6899999977665 5788877754 2 4444 235788887766432222 1 2221112 2
Q ss_pred CHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 337 SKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 337 t~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
..++ ++++++...-.++++.+++..
T Consensus 188 ~~~~----l~~~v~~ip~drlLlETD~P~ 212 (287)
T 3rcm_A 188 RGTH----LHPLVGNIPEGRLMLESDAPY 212 (287)
T ss_dssp TCGG----GHHHHTTSCTTSEEECCCTTS
T ss_pred CHHH----HHHHHHhcCCccEEEeccCCc
Confidence 2233 345555556568999999864
No 245
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=53.51 E-value=1.1e+02 Score=26.62 Aligned_cols=78 Identities=21% Similarity=0.212 Sum_probs=46.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEE
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVV 304 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l 304 (386)
.++++.+.++|++.|.+.|..+. ..+. . ..+++..+.+.. ++|+++ .|... .++.+.+.|++.+
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~~~g-----~----~~~~i~~i~~~~-~iPvi~--~ggi~~~~~i~~~~~~Gad~v 100 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGTKSG-----Y----DTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLAGADKA 100 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSCSSC-----C----CHHHHHHHGGGC-CSCEEE--ESCCCSTHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHCCCCEEEEEecCcccCCCc-----c----cHHHHHHHHHhc-CCCEEE--ECCCCCHHHHHHHHHcCCcHh
Confidence 45667778899999999885432 1111 1 223344444443 577655 34432 3677788999998
Q ss_pred EcCCC-C----CHHHHHHH
Q 016596 305 SLDWT-V----DMAEGRRR 318 (386)
Q Consensus 305 ~~d~~-~----dl~e~~~~ 318 (386)
.+... . ++..+++.
T Consensus 101 ~lg~~~~~~~~~~~~~~~~ 119 (266)
T 2w6r_A 101 LAASVFHFREIDMRELKEY 119 (266)
T ss_dssp ECCCCC------CHHHHHH
T ss_pred hhhHHHHhCCCCHHHHHHH
Confidence 77542 2 66666664
No 246
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=53.22 E-value=79 Score=28.12 Aligned_cols=80 Identities=6% Similarity=0.112 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHhCCCEEEEe----cCCcC--CCCHHHHHHhhH-HHHHHHHHHHHhhCCCCcEEEEecCC-------cch
Q 016596 227 SMAKYVQYQADNGAQAVQIF----DSWAT--ELSPVDFEEFSL-PYLKQIVDTVKQTHPDLSLILYASGS-------GGL 292 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~----d~~~~--~iSp~~f~ef~~-P~~k~l~~~i~~~~~~~~~~~H~cG~-------~~~ 292 (386)
...+.++.+.++|+|.|=++ ||.+. .|-...-+-+-. -..+++++.+++....+|+++..--| ..+
T Consensus 29 ~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~~Pivlm~Y~N~i~~~G~e~F 108 (252)
T 3tha_A 29 TSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTKKALVFMVYYNLIFSYGLEKF 108 (252)
T ss_dssp HHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCSSEEEEECCHHHHHHHCHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcCCCEEEEeccCHHHHhhHHHH
Confidence 34456667888999988765 45442 222111111110 01234444444422135777755433 224
Q ss_pred HHHHHhcCCCEEEc
Q 016596 293 LERLALTGVDVVSL 306 (386)
Q Consensus 293 l~~l~e~g~d~l~~ 306 (386)
+...++.|+|.+-+
T Consensus 109 ~~~~~~aGvdG~Ii 122 (252)
T 3tha_A 109 VKKAKSLGICALIV 122 (252)
T ss_dssp HHHHHHTTEEEEEC
T ss_pred HHHHHHcCCCEEEe
Confidence 56677889998754
No 247
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=53.14 E-value=1.6e+02 Score=28.31 Aligned_cols=61 Identities=11% Similarity=0.202 Sum_probs=35.8
Q ss_pred CCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCC---CCcEEEEecCCc-c--hHHHHHhcCCCEEEcC
Q 016596 239 GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP---DLSLILYASGSG-G--LLERLALTGVDVVSLD 307 (386)
Q Consensus 239 G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~---~~~~~~H~cG~~-~--~l~~l~e~g~d~l~~d 307 (386)
+...|++.+...++++++.+ .++++.+++..+ +..+.+-+.++. + .++.|.+.|++-+++.
T Consensus 104 ~i~~i~fgGGtpt~l~~~~l--------~~ll~~i~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislG 170 (457)
T 1olt_A 104 HVSQLHWGGGTPTYLNKAQI--------SRLMKLLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMG 170 (457)
T ss_dssp CEEEEEEEESCGGGSCHHHH--------HHHHHHHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEE
T ss_pred ceEEEEEeCCCcccCCHHHH--------HHHHHHHHHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEe
Confidence 35567776655567777654 445555555311 122334444442 2 5899999999987663
No 248
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=52.78 E-value=39 Score=34.94 Aligned_cols=126 Identities=19% Similarity=0.348 Sum_probs=75.4
Q ss_pred HHHHHHHHHHHHHHhCCCEEEE---ecCCcCCC-CHHHH-HHhhHHH----HHHHHHHHHhhCCCCcEEEEecCCc----
Q 016596 224 FTTSMAKYVQYQADNGAQAVQI---FDSWATEL-SPVDF-EEFSLPY----LKQIVDTVKQTHPDLSLILYASGSG---- 290 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i---~d~~~~~i-Sp~~f-~ef~~P~----~k~l~~~i~~~~~~~~~~~H~cG~~---- 290 (386)
-++..++|++-..+.|-+.+.+ -..|.+.+ +.+.+ =.|..|| +++|++..+++ |+.+++|..-..
T Consensus 369 nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sK--GV~iilw~~t~~~~~n 446 (738)
T 2d73_A 369 NTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARK--GIKMMMHHETSASVRN 446 (738)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHT--TCEEEEEEECTTBHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhC--CCEEEEEEcCCCchhh
Confidence 4566677888888899999987 44553221 01100 0133444 89999999998 678888876432
Q ss_pred --c----hHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEE-ecCC
Q 016596 291 --G----LLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHIL-NLGH 363 (386)
Q Consensus 291 --~----~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Il-s~gc 363 (386)
. .+..+.+.|+..+-+|.-.| .+|... ....++..+.-.++++.++..+..+ .=||
T Consensus 447 ~e~~~d~~f~~~~~~Gv~GVKvdF~g~----------------~~~r~~-~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg~ 509 (738)
T 2d73_A 447 YERHMDKAYQFMADNGYNSVKSGYVGN----------------IIPRGE-HHYGQWMNNHYLYAVKKAADYKIMVNAHEA 509 (738)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECCSS----------------CBSTTC-CTTSHHHHHHHHHHHHHHHHTTCEEEETTS
T ss_pred HHHHHHHHHHHHHHcCCCEEEeCcccc----------------CcCCcc-cccchHHHHHHHHHHHHHHHcCcEEEccCC
Confidence 1 24667788998887776433 121111 1123666677778888776434333 3366
Q ss_pred CCCCC
Q 016596 364 GIKVG 368 (386)
Q Consensus 364 ~i~~~ 368 (386)
..|.+
T Consensus 510 ~kPtG 514 (738)
T 2d73_A 510 TRPTG 514 (738)
T ss_dssp CCCCS
T ss_pred cCCCc
Confidence 55543
No 249
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=52.29 E-value=35 Score=31.24 Aligned_cols=61 Identities=26% Similarity=0.366 Sum_probs=43.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d 307 (386)
+.++..+++|+|.|++ |. +||++.++.+ +.++. .+.+-..|+.+ .+..++++|+|.+++.
T Consensus 218 ~e~~eAl~aGaDiImL-Dn----~s~~~l~~av--------~~~~~-----~v~leaSGGIt~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 218 SQVEESLSNNVDMILL-DN----MSISEIKKAV--------DIVNG-----KSVLEVSGCVNIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp HHHHHHHHTTCSEEEE-ES----CCHHHHHHHH--------HHHTT-----SSEEEEESSCCTTTHHHHHTTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEE-CC----CCHHHHHHHH--------HhhcC-----ceEEEEECCCCHHHHHHHHHcCCCEEEeC
Confidence 4455667789999885 43 6787666544 34432 24667788876 4899999999999875
Q ss_pred C
Q 016596 308 W 308 (386)
Q Consensus 308 ~ 308 (386)
.
T Consensus 280 a 280 (300)
T 3l0g_A 280 C 280 (300)
T ss_dssp G
T ss_pred c
Confidence 3
No 250
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=52.17 E-value=66 Score=30.41 Aligned_cols=70 Identities=13% Similarity=0.156 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCCC
Q 016596 227 SMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGVD 302 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~d 302 (386)
+..+.++++.++ ++.|.++|..+ .+.|..+.+++.- +.+.+. ++.++-+|++-+... + ..+ .+.|++
T Consensus 146 ~~~~~~~~~~~~-a~~i~l~DT~G-~~~P~~~~~lv~~----l~~~~~---~~~~i~~H~Hnd~GlAvAN~laAv~aGa~ 216 (382)
T 2ztj_A 146 DLLAVYEAVAPY-VDRVGLADTVG-VATPRQVYALVRE----VRRVVG---PRVDIEFHGHNDTGCAIANAYEAIEAGAT 216 (382)
T ss_dssp HHHHHHHHHGGG-CSEEEEEETTS-CCCHHHHHHHHHH----HHHHHT---TTSEEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHh-cCEEEecCCCC-CCCHHHHHHHHHH----HHHhcC---CCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 344445556678 99999988866 4778887776542 222210 146889999887652 2 333 467999
Q ss_pred EEE
Q 016596 303 VVS 305 (386)
Q Consensus 303 ~l~ 305 (386)
.+.
T Consensus 217 ~vd 219 (382)
T 2ztj_A 217 HVD 219 (382)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 251
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=51.99 E-value=1e+02 Score=25.94 Aligned_cols=79 Identities=19% Similarity=0.083 Sum_probs=43.8
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc--chHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG--GLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~--~~l~~l~e~g~d~l~~ 306 (386)
.+.++.+.+.|++.|.+.+.. +... ...+++.+.+ +.++++=..+.. ..++...+.|+|.+++
T Consensus 22 ~~~~~~~~~~G~~~i~l~~~~-----~~~~-----~~i~~i~~~~-----~~~l~vg~g~~~~~~~i~~a~~~Gad~V~~ 86 (212)
T 2v82_A 22 LAHVGAVIDAGFDAVEIPLNS-----PQWE-----QSIPAIVDAY-----GDKALIGAGTVLKPEQVDALARMGCQLIVT 86 (212)
T ss_dssp HHHHHHHHHHTCCEEEEETTS-----TTHH-----HHHHHHHHHH-----TTTSEEEEECCCSHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHCCCCEEEEeCCC-----hhHH-----HHHHHHHHhC-----CCCeEEEeccccCHHHHHHHHHcCCCEEEe
Confidence 445666778899999885543 2111 2223333322 334444111111 2478888999999886
Q ss_pred CCC-CCHHHHHHHhCCC
Q 016596 307 DWT-VDMAEGRRRLGPD 322 (386)
Q Consensus 307 d~~-~dl~e~~~~~g~~ 322 (386)
... .++.+.++.+|.+
T Consensus 87 ~~~~~~~~~~~~~~g~~ 103 (212)
T 2v82_A 87 PNIHSEVIRRAVGYGMT 103 (212)
T ss_dssp SSCCHHHHHHHHHTTCE
T ss_pred CCCCHHHHHHHHHcCCC
Confidence 543 2455566667654
No 252
>1wdp_A Beta-amylase; (beta/alpha)8 barrel, hydrolase; 1.27A {Glycine max} SCOP: c.1.8.1 PDB: 1bfn_A* 1q6c_A 1wdr_A* 1v3i_A* 1v3h_A* 1q6d_A* 1q6g_A* 1wdq_A* 1wds_A* 1q6e_A* 1q6f_A* 2dqx_A 1byb_A* 1bya_A* 1byc_A* 1byd_A* 1uko_A 1ukp_A 1btc_A*
Probab=51.72 E-value=3.4 Score=40.43 Aligned_cols=56 Identities=13% Similarity=0.232 Sum_probs=37.4
Q ss_pred HHHHHHHhCCCEEEEecCCc--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCC--cEEEEecCC
Q 016596 231 YVQYQADNGAQAVQIFDSWA--TELSPVDFEEFSLPYLKQIVDTVKQTHPDL--SLILYASGS 289 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~--~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~--~~~~H~cG~ 289 (386)
.++++..+|+++|.+--=|+ .--+| .+|-|-+++++++.+++.|-.+ ...+|-||.
T Consensus 38 ~L~~LK~~GVdGVmvDVWWGiVE~~~P---~~YdWsgY~~l~~mv~~~GLKlq~vmSFHqCGg 97 (495)
T 1wdp_A 38 QLLQLRAAGVDGVMVDVWWGIIELKGP---KQYDWRAYRSLLQLVQECGLTLQAIMSFHQCGG 97 (495)
T ss_dssp HHHHHHHTTCCEEEEEEEHHHHTCSST---TCCCCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHcCCCEEEEEeEeeeeccCCC---CccCcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 34567789999998632233 12334 4578999999999999984222 123699975
No 253
>1fa2_A Beta-amylase; TIM barrel, hydrolase; HET: DOM; 2.30A {Ipomoea batatas} SCOP: c.1.8.1
Probab=51.71 E-value=3.2 Score=40.57 Aligned_cols=56 Identities=13% Similarity=0.278 Sum_probs=37.3
Q ss_pred HHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCC--cEEEEecCC
Q 016596 231 YVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDL--SLILYASGS 289 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~--~~~~H~cG~ 289 (386)
.++++..+|+++|.+--=|+- --+| .+|-|-+++++++.+++.|-.+ ...+|-||.
T Consensus 39 ~L~~LK~~GVdGVmvDVWWGiVE~~~P---~~YdWsgY~~L~~mv~~~GLKlq~vmSFHqCGg 98 (498)
T 1fa2_A 39 ELKQVKAGGCDGVMVDVWWGIIEAKGP---KQYDWSAYRELFQLVKKCGLKIQAIMSFHQCGG 98 (498)
T ss_dssp HHHHHHHTTCCEEEEEEEHHHHTCSBT---TBCCCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHcCCCEEEEEeEeeeeccCCC---CccCcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 345677899999986322331 2234 4578999999999999984222 123699975
No 254
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=51.67 E-value=55 Score=29.76 Aligned_cols=110 Identities=13% Similarity=0.141 Sum_probs=56.9
Q ss_pred HHHHHHHHhCCCEEEEecCCc-CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCc-chHHHHHhcCCCEEEc
Q 016596 230 KYVQYQADNGAQAVQIFDSWA-TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSG-GLLERLALTGVDVVSL 306 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~-~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~-~~l~~l~e~g~d~l~~ 306 (386)
..+++..+.+..+|.-..+.+ .+.+ .+++..++..+.+.. ++|+.+|.+ |.. ..+..-++.|+..+.+
T Consensus 33 avl~AAe~~~sPvIlq~s~~~~~y~g--------~~~~~~~v~~~a~~~-~VPValHlDHg~~~e~i~~ai~~GFtSVMi 103 (286)
T 1gvf_A 33 AILEVCSEMRSPVILAGTPGTFKHIA--------LEEIYALCSAYSTTY-NMPLALHLDHHESLDDIRRKVHAGVRSAMI 103 (286)
T ss_dssp HHHHHHHHHTCCCEEEECTTHHHHSC--------HHHHHHHHHHHHHHT-TSCBEEEEEEECCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhCCCEEEECChhHHhhcC--------HHHHHHHHHHHHHhC-CCcEEEEcCCCCCHHHHHHHHHcCCCeEEE
Confidence 334455566777665322221 1222 233333443333332 689999986 333 2466677899999988
Q ss_pred CCC-C----CHHHHHHHhC----CCeeE------EecCC------c-CccCCCHHHHHHHHHHH
Q 016596 307 DWT-V----DMAEGRRRLG----PDVAV------QGNVD------P-GALFGSKDFITNRINDT 348 (386)
Q Consensus 307 d~~-~----dl~e~~~~~g----~~~~l------~G~vd------~-~~l~gt~eev~~~v~~~ 348 (386)
|.. . +++..++... ..+.+ .|+.. . ..++-+|||+.+.+++.
T Consensus 104 DgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~T 167 (286)
T 1gvf_A 104 DGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELT 167 (286)
T ss_dssp CCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHH
Confidence 754 2 3333333221 11333 12211 1 12468899999888753
No 255
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=51.25 E-value=43 Score=30.73 Aligned_cols=68 Identities=12% Similarity=0.087 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEE--EecCCcc-h-HHHHHhcC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLIL--YASGSGG-L-LERLALTG 300 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~--H~cG~~~-~-l~~l~e~g 300 (386)
.+-.++.++++.++|||+|| ..+.-|++++++++.-. +++|+.+ -.-|... + .+.|.++|
T Consensus 169 ldeAi~Ra~ay~eAGAD~if----i~g~~~~~ei~~~~~~~------------~~~Pl~~n~~~~g~~p~~~~~eL~~lG 232 (302)
T 3fa4_A 169 YEESVARLRAARDAGADVGF----LEGITSREMARQVIQDL------------AGWPLLLNMVEHGATPSISAAEAKEMG 232 (302)
T ss_dssp HHHHHHHHHHHHTTTCSEEE----ETTCCCHHHHHHHHHHT------------TTSCEEEECCTTSSSCCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEe----ecCCCCHHHHHHHHHHh------------cCCceeEEEecCCCCCCCCHHHHHHcC
Q ss_pred CCEEEcCC
Q 016596 301 VDVVSLDW 308 (386)
Q Consensus 301 ~d~l~~d~ 308 (386)
+..+++..
T Consensus 233 v~~v~~~~ 240 (302)
T 3fa4_A 233 FRIIIFPF 240 (302)
T ss_dssp CSEEEETT
T ss_pred CCEEEEch
No 256
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=51.20 E-value=48 Score=30.31 Aligned_cols=67 Identities=16% Similarity=0.164 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEE-ecC-Ccc-h-HHHHHhcC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILY-ASG-SGG-L-LERLALTG 300 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H-~cG-~~~-~-l~~l~e~g 300 (386)
.+-.++-++++.++|||+||+.- .-+++.+++|. +.++ +|+..- .++ ... + .+.|.++|
T Consensus 170 ldeai~Ra~ay~~AGAD~if~~~----~~~~ee~~~~~--------~~~~-----~Pl~~n~~~~g~tp~~~~~eL~~lG 232 (298)
T 3eoo_A 170 IDAAIERAIAYVEAGADMIFPEA----MKTLDDYRRFK--------EAVK-----VPILANLTEFGSTPLFTLDELKGAN 232 (298)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECC----CCSHHHHHHHH--------HHHC-----SCBEEECCTTSSSCCCCHHHHHHTT
T ss_pred HHHHHHHHHhhHhcCCCEEEeCC----CCCHHHHHHHH--------HHcC-----CCeEEEeccCCCCCCCCHHHHHHcC
Confidence 45566778889999999998632 23677766654 3442 365433 343 333 3 79999999
Q ss_pred CCEEEcCC
Q 016596 301 VDVVSLDW 308 (386)
Q Consensus 301 ~d~l~~d~ 308 (386)
+..+++..
T Consensus 233 v~~v~~~~ 240 (298)
T 3eoo_A 233 VDIALYCC 240 (298)
T ss_dssp CCEEEECS
T ss_pred CeEEEEch
Confidence 99998764
No 257
>1q6o_A Humps, 3-keto-L-gulonate 6-phosphate decarboxylase, D-; beta barrel, lyase; HET: LG6; 1.20A {Escherichia coli} SCOP: c.1.2.3 PDB: 1kw1_A* 1q6l_A* 1kv8_A* 1q6q_A* 1q6r_A* 1xbv_A* 1so5_A* 1so4_A* 1xby_A* 1so3_A* 1so6_A* 1xbz_A* 1xbx_A*
Probab=51.19 E-value=68 Score=27.35 Aligned_cols=122 Identities=14% Similarity=0.042 Sum_probs=65.2
Q ss_pred HHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcc-hHHHHHhcCCCEEEc-----
Q 016596 234 YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGG-LLERLALTGVDVVSL----- 306 (386)
Q Consensus 234 ~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~-~l~~l~e~g~d~l~~----- 306 (386)
.+.++|+|.+.+.-..+ ++ .++++++.+++. |.+..+-+. +-+. ..+.+.+.|.+-+-+
T Consensus 75 ~~~~~Gad~itvh~~~g----~~--------~l~~~~~~~~~~--g~~~~~~ll~~~t~~~~~~l~~~~~~~~vl~~a~~ 140 (216)
T 1q6o_A 75 MCFEANADWVTVICCAD----IN--------TAKGALDVAKEF--NGDVQIELTGYWTWEQAQQWRDAGIGQVVYHRSRD 140 (216)
T ss_dssp HHHHTTCSEEEEETTSC----HH--------HHHHHHHHHHHT--TCEEEEEECSCCCHHHHHHHHHTTCCEEEEECCHH
T ss_pred HHHhCCCCEEEEeccCC----HH--------HHHHHHHHHHHc--CCCceeeeeeCCChhhHHHHHhcCcHHHHHHHHHH
Confidence 56789999988643322 22 244556777775 455433233 3212 356666666543222
Q ss_pred ----CCC---CCHHHHHHHhCCC--eeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCC-CCCcHHHHHH
Q 016596 307 ----DWT---VDMAEGRRRLGPD--VAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIK-VGTPEENVAH 376 (386)
Q Consensus 307 ----d~~---~dl~e~~~~~g~~--~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~-~~tp~Eni~a 376 (386)
... ..+.++++..+.. +.+.|||.+.. ++++++. |-..++++. .+- ..-|.+.+++
T Consensus 141 ~~~~G~~g~~~~i~~lr~~~~~~~~i~v~GGI~~~~-----------~~~~~~a-Gad~ivvG~--~I~~a~dp~~~~~~ 206 (216)
T 1q6o_A 141 AQAAGVAWGEADITAIKRLSDMGFKVTVTGGLALED-----------LPLFKGI-PIHVFIAGR--SIRDAASPVEAARQ 206 (216)
T ss_dssp HHHTTCCCCHHHHHHHHHHHHTTCEEEEESSCCGGG-----------GGGGTTS-CCSEEEESH--HHHTSSCHHHHHHH
T ss_pred HHhcCCCCCHHHHHHHHHhcCCCCcEEEECCcChhh-----------HHHHHHc-CCCEEEEee--hhcCCCCHHHHHHH
Confidence 111 1345666767533 57899998743 2333332 222444433 232 2237788888
Q ss_pred HHHHHHh
Q 016596 377 FFEVAKA 383 (386)
Q Consensus 377 ~~~a~~~ 383 (386)
+.+..++
T Consensus 207 ~~~~i~~ 213 (216)
T 1q6o_A 207 FKRSIAE 213 (216)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877665
No 258
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=51.10 E-value=1.7e+02 Score=27.89 Aligned_cols=142 Identities=9% Similarity=0.028 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-c-------CCcc--
Q 016596 222 RKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-S-------GSGG-- 291 (386)
Q Consensus 222 ~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-c-------G~~~-- 291 (386)
+.+.++..+.++.+++.|+|.+.+ +.. .+...- +-+++.+++. +.|+++-. + |...
T Consensus 135 eel~~~~~eqi~~L~~~GvDlll~-ETi---~~~~Ea--------kaa~~a~~~~--~lPv~iS~T~~~~G~l~G~~~~~ 200 (406)
T 1lt8_A 135 TEVKKVFLQQLEVFMKKNVDFLIA-EYF---EHVEEA--------VWAVETLIAS--GKPVAATMAIGPEGDLHGVPPGE 200 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCSEEEE-CCC---SCHHHH--------HHHHHHHGGG--TSCEEEEECCBTTBCTTCCCHHH
T ss_pred HHHHHHHHHHHHHHhhCCCCEEEE-ccc---CCHHHH--------HHHHHHHHHh--CCcEEEEEEECCCCCcCCCcHHH
Confidence 446667777788888999998763 444 333222 2334566654 46766643 3 2221
Q ss_pred hHHHHHhcCCCEEEcCCCCCH-------HHHHHHh---CCCeeEE--ecC----C--cCcc--------CCCHH-----H
Q 016596 292 LLERLALTGVDVVSLDWTVDM-------AEGRRRL---GPDVAVQ--GNV----D--PGAL--------FGSKD-----F 340 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d~~~dl-------~e~~~~~---g~~~~l~--G~v----d--~~~l--------~gt~e-----e 340 (386)
.+..+.+.+++++.+.=...+ +.+++.. |.++.++ -|- + +... ..+|+ +
T Consensus 201 ~~~~l~~~~~~avGvNC~~gP~~~~~~l~~l~~~~~~~g~~~pl~vyPNag~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 280 (406)
T 1lt8_A 201 AAVRLVKAGASIIGVNCHFDPTISLKTVKLMKEGLEAAQLKAHLMSQPLAYHTPDANKQGFIDLPEFPFGLEPRVATRWD 280 (406)
T ss_dssp HHHHHHTTTCSEEEEESSSCHHHHHHHHHHHHHHHHTTTCCCEEEEECCSBCCTTCCTTCGGGSTTTTTSCGGGBCCHHH
T ss_pred HHHHhhcCCCCEEEecCCCCHHHHHHHHHHHHHhhhhcCCCccEEEecCCCCCCcCCcccccCCccccccCCHHHHHHHH
Confidence 245556778888766422222 3333332 1123332 221 1 0101 12333 5
Q ss_pred HHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhh
Q 016596 341 ITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 341 v~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
+.+.+++..+.+ --|++ ||- +|.|+.|+++.++++.+
T Consensus 281 ~~~~a~~w~~~G---a~iIG-GCC---GTtPeHI~aia~~l~~~ 317 (406)
T 1lt8_A 281 IQKYAREAYNLG---VRYIG-GCC---GFEPYHIRAIAEELAPE 317 (406)
T ss_dssp HHHHHHHHHHHT---EEEEC-CCT---TCCHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHhCC---CeEEE-Eec---CCCHHHHHHHHHHHhcc
Confidence 777777765543 34565 443 47899999999988765
No 259
>1zzm_A Putative deoxyribonuclease YJJV; hydrolaze, zinc, PEG, structural genomics, PSI; HET: P33; 1.80A {Escherichia coli} SCOP: c.1.9.12
Probab=50.74 E-value=93 Score=26.92 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=54.1
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCC--CE-EEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCH
Q 016596 263 LPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGV--DV-VSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSK 338 (386)
Q Consensus 263 ~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~--d~-l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~ 338 (386)
.+.+++.++.+.+. +.|+++|+-.... .++.+.+.|. .+ ++.. ..+...+++.+...+-+ + ++....+...
T Consensus 113 ~~~f~~~~~~a~~~--~~Pv~iH~~~a~~~~~~il~~~~~~~~~i~H~~-~g~~~~~~~~~~~g~~i-~-~~g~~~~~~~ 187 (259)
T 1zzm_A 113 QWLLDEQLKLAKRY--DLPVILHSRRTHDKLAMHLKRHDLPRTGVVHGF-SGSLQQAERFVQLGYKI-G-VGGTITYPRA 187 (259)
T ss_dssp HHHHHHHHHHHHHT--TCCEEEEEESCHHHHHHHHHHHCCTTCEEETTC-CSCHHHHHHHHHTTCEE-E-ECGGGGCTTT
T ss_pred HHHHHHHHHHHHHh--CCcEEEEecccHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHCCCEE-E-ECceeecccc
Confidence 45667778888886 6899999865544 4677777764 33 3432 34666666654322222 1 2221112222
Q ss_pred HHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 339 DFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 339 eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
+ .++++++.....++++++++..
T Consensus 188 ~----~~~~~~~~~~~dril~eTD~P~ 210 (259)
T 1zzm_A 188 S----KTRDVIAKLPLASLLLETDAPD 210 (259)
T ss_dssp C----SHHHHHHHSCGGGEEECCCBTS
T ss_pred H----HHHHHHHhCCHHHEEEecCCCC
Confidence 2 3455556555568999998753
No 260
>2ffi_A 2-pyrone-4,6-dicarboxylic acid hydrolase, putativ; TIM-barrel protein., structural genomics, PSI, protein struc initiative; 2.61A {Pseudomonas putida} SCOP: c.1.9.15
Probab=50.60 E-value=77 Score=27.91 Aligned_cols=122 Identities=15% Similarity=0.100 Sum_probs=66.6
Q ss_pred HHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-c-hHHHHHhcCCCEE--EcCCCC
Q 016596 235 QADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-G-LLERLALTGVDVV--SLDWTV 310 (386)
Q Consensus 235 ~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~-~l~~l~e~g~d~l--~~d~~~ 310 (386)
+.+.|+.+|-+.-...+.. .+-.|.+.++++.+.++ |.|+.+|+-... . ..+.+.++|..++ +.....
T Consensus 101 ~~~~g~~Gi~~~~~~~~~~------~~~~~~~~~~~~~a~~~--~lpv~iH~~~~~~~~~~~~~~~~pl~~vi~H~g~~~ 172 (288)
T 2ffi_A 101 MARLGVRGVRLNLMGQDMP------DLTGAQWRPLLERIGEQ--GWHVELHRQVADIPVLVRALQPYGLDIVIDHFGRPD 172 (288)
T ss_dssp HHTTTCCEEECCCSSSCCC------CTTSTTTHHHHHHHHHH--TCEEEECSCTTTHHHHHHHHTTTTCCEEESGGGSCC
T ss_pred HHHCCCeEEEEecccCCCC------CcccHHHHHHHHHHHHC--CCeEEEeechhhHHHHHHHHHHCCCCEEEECCCCCC
Confidence 3346888886543332111 12235566677888887 689999875442 2 3466667785544 332211
Q ss_pred --------CHHHHHHHhCC-CeeEEecCCcCccC-C----CHHHHHHHHHHHHHHcCCCCeEEecCCCCC
Q 016596 311 --------DMAEGRRRLGP-DVAVQGNVDPGALF-G----SKDFITNRINDTVRKAGRWKHILNLGHGIK 366 (386)
Q Consensus 311 --------dl~e~~~~~g~-~~~l~G~vd~~~l~-g----t~eev~~~v~~~i~~~~~~g~Ils~gc~i~ 366 (386)
..+.+++.... ++-+ .+...... . +.++....++++++..+..+++++++....
T Consensus 173 ~~~~~~~~~~~~~~~l~~~~n~y~--~~sg~~~~~~~~~~~~~~~~~~~~~~~~~~g~drll~gSD~P~~ 240 (288)
T 2ffi_A 173 ARRGLGQPGFAELLTLSGRGKVWV--KVSGIYRLQGSPEENLAFARQALCALEAHYGAERLMWGSDWPHT 240 (288)
T ss_dssp TTSCTTCTTHHHHTTCCCCSCEEE--EEECGGGSSSCHHHHHHHHHHHHHHHHHHTCGGGEEEECCTTCT
T ss_pred CCCCCCChhHHHHHHHHhCCCEEE--EeCcchhhccccCCCHHHHHHHHHHHHHHhCCCceEEecCCCCC
Confidence 14444443221 1111 11111111 1 224566788899999886799999987654
No 261
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=50.52 E-value=57 Score=28.79 Aligned_cols=40 Identities=20% Similarity=0.302 Sum_probs=21.3
Q ss_pred HHHHHHHHhhCCCCcEE-EEecCCcc---h---HHHHHhcCCCEEEcC
Q 016596 267 KQIVDTVKQTHPDLSLI-LYASGSGG---L---LERLALTGVDVVSLD 307 (386)
Q Consensus 267 k~l~~~i~~~~~~~~~~-~H~cG~~~---~---l~~l~e~g~d~l~~d 307 (386)
++.+..+++.+ ....+ +-.+|+.. . +..+.+.|+|.+.++
T Consensus 6 ~~~~~~~~~~~-~~~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg 52 (262)
T 1rd5_A 6 SDTMAALMAKG-KTAFIPYITAGDPDLATTAEALRLLDGCGADVIELG 52 (262)
T ss_dssp HHHHHHHHHTT-CCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEE
T ss_pred HHHHHHHHhcC-CceEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEEC
Confidence 44455555432 22233 33577652 2 345567789988775
No 262
>2xfr_A Beta-amylase; hydrolase, carbohydrate metabolism, glycosyl hydrolase famil starch degradation, germination; 0.97A {Hordeum vulgare} PDB: 2xff_A 2xfy_A* 2xg9_A* 2xgb_A* 2xgi_A* 1b1y_A*
Probab=50.40 E-value=3.6 Score=40.49 Aligned_cols=56 Identities=16% Similarity=0.299 Sum_probs=37.6
Q ss_pred HHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCC--cEEEEecCC
Q 016596 231 YVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDL--SLILYASGS 289 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~--~~~~H~cG~ 289 (386)
.++++..+|+++|.+--=|+- --+| .+|-|-+++++++.+++.|-.+ ...+|-||.
T Consensus 36 ~L~~LK~~GVdGVmvDVWWGiVE~~~P---~~YdWsgY~~L~~mvr~~GLKlq~vmSFHqCGg 95 (535)
T 2xfr_A 36 QLRKLVEAGVDGVMVDVWWGLVEGKGP---KAYDWSAYKQLFELVQKAGLKLQAIMSFHQCGG 95 (535)
T ss_dssp HHHHHHHTTCCEEEEEEEHHHHTCSST---TCCCCHHHHHHHHHHHHTTCEEEEEEECSCBCC
T ss_pred HHHHHHHcCCCEEEEEeEeeeeccCCC---CccCcHHHHHHHHHHHHcCCeEEEEEEeeecCC
Confidence 345677899999986323331 2345 4578999999999999984222 123699975
No 263
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=50.35 E-value=1e+02 Score=28.28 Aligned_cols=110 Identities=16% Similarity=0.149 Sum_probs=63.1
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcc-hHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGG-LLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~-~l~~l~e~g~d~l~~d 307 (386)
..+++..+.+..+|.- +|+...+-...+++..++..+.+ . ++|+.+|.+ |..- .+..-++.|+..+.+|
T Consensus 32 Ail~AAee~~sPvIlq-------~s~g~~~y~g~~~~~~~v~~~a~-~-~VPValHlDHg~~~e~~~~ai~~GFtSVMiD 102 (305)
T 1rvg_A 32 AVLEAAEEQRSPVILA-------LSEGAMKYGGRALTLMAVELAKE-A-RVPVAVHLDHGSSYESVLRALRAGFTSVMID 102 (305)
T ss_dssp HHHHHHHHTTCCEEEE-------EEHHHHHHHHHHHHHHHHHHHHH-C-SSCEEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhCCCEEEE-------CChhHHhhCCHHHHHHHHHHHHh-C-CCcEEEECCCCCCHHHHHHHHHcCCCeeeeC
Confidence 3344555677877652 44443322334566666666665 3 699999986 4332 4555668899999887
Q ss_pred CC-C----CHHHHHHHhC----CCeeE------EecCCc-------CccCCCHHHHHHHHHHH
Q 016596 308 WT-V----DMAEGRRRLG----PDVAV------QGNVDP-------GALFGSKDFITNRINDT 348 (386)
Q Consensus 308 ~~-~----dl~e~~~~~g----~~~~l------~G~vd~-------~~l~gt~eev~~~v~~~ 348 (386)
.. . +++..|+... ..+++ .|+..- ..++-+|||+.+.+++.
T Consensus 103 gS~~p~eENi~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~T 165 (305)
T 1rvg_A 103 KSHEDFETNVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERT 165 (305)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHH
Confidence 54 2 3333333221 11333 233221 12468899999998765
No 264
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=49.89 E-value=1.1e+02 Score=25.50 Aligned_cols=77 Identities=14% Similarity=0.105 Sum_probs=46.3
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW 308 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~ 308 (386)
.+.++.+.+.|++.|.+.++. .+++.+.+. .+++.+..+.. +++++++ ..++...+.|++.+++..
T Consensus 29 ~~~~~~~~~~G~~~i~l~~~~---~~~~~~~~~----~~~l~~~~~~~--~v~v~v~-----~~~~~a~~~gad~v~l~~ 94 (215)
T 1xi3_A 29 VESVREALEGGATAIQMRIKN---APTREMYEI----GKTLRQLTREY--DALFFVD-----DRVDVALAVDADGVQLGP 94 (215)
T ss_dssp HHHHHHHHHTTCSEEEECCCS---CCHHHHHHH----HHHHHHHHHHT--TCEEEEE-----SCHHHHHHHTCSEEEECT
T ss_pred HHHHHHHHHCCCCEEEECCCC---CCHHHHHHH----HHHHHHHHHHc--CCeEEEc-----ChHHHHHHcCCCEEEECC
Confidence 455667888999999876543 455544333 23333333333 4566653 346778888999887753
Q ss_pred -CCCHHHHHHHh
Q 016596 309 -TVDMAEGRRRL 319 (386)
Q Consensus 309 -~~dl~e~~~~~ 319 (386)
..+..++++..
T Consensus 95 ~~~~~~~~~~~~ 106 (215)
T 1xi3_A 95 EDMPIEVAKEIA 106 (215)
T ss_dssp TSCCHHHHHHHC
T ss_pred ccCCHHHHHHhC
Confidence 24566665543
No 265
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=49.74 E-value=87 Score=29.44 Aligned_cols=91 Identities=13% Similarity=0.078 Sum_probs=54.8
Q ss_pred hhCHHHHHHHHHHHHH------------------------HHHHHHHHHHHhCCCEEEEecCCcC--------------C
Q 016596 211 FSQPKVLHALLRKFTT------------------------SMAKYVQYQADNGAQAVQIFDSWAT--------------E 252 (386)
Q Consensus 211 ~~~Pe~v~~ll~~~~~------------------------~~~~~~~~~~e~G~d~i~i~d~~~~--------------~ 252 (386)
..+|+.+.++++.+.+ -+.+.++.+.++|+|+|.+.....+ -
T Consensus 195 l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gG 274 (367)
T 3zwt_A 195 LQGKAELRRLLTKVLQERDGLRRVHRPAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGG 274 (367)
T ss_dssp GGSHHHHHHHHHHHHHHHHTSCGGGCCEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSE
T ss_pred cCCHHHHHHHHHHHHHHHhhccccCCceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCC
Confidence 4679988888887754 3456778888999999987654311 1
Q ss_pred CCHHHHHHhhHHHHHHHHHHHHhhCC-CCcEEEEecCCcc---hHHHHHhcCCCEEEcC
Q 016596 253 LSPVDFEEFSLPYLKQIVDTVKQTHP-DLSLILYASGSGG---LLERLALTGVDVVSLD 307 (386)
Q Consensus 253 iSp~~f~ef~~P~~k~l~~~i~~~~~-~~~~~~H~cG~~~---~l~~l~e~g~d~l~~d 307 (386)
+|.. -++|...+++..+++..+ .+| +-.+|.+. ....+.+.|++.+.+.
T Consensus 275 lSG~----~i~p~a~~~v~~i~~~v~~~ip--vI~~GGI~s~~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 275 LSGK----PLRDLSTQTIREMYALTQGRVP--IIGVGGVSSGQDALEKIRAGASLVQLY 327 (367)
T ss_dssp EEEG----GGHHHHHHHHHHHHHHTTTCSC--EEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred cCCc----ccchhHHHHHHHHHHHcCCCce--EEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3332 234444455555555422 344 33455543 2444455788888765
No 266
>1j6o_A TATD-related deoxyribonuclease; structural genomics, TM0667, JCSG, PSI, protein structure initiative, joint center for structural genomics; 1.80A {Thermotoga maritima} SCOP: c.1.9.12
Probab=48.80 E-value=1.1e+02 Score=26.86 Aligned_cols=97 Identities=10% Similarity=0.153 Sum_probs=56.6
Q ss_pred HhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCC---C-EEEcCCCCCHHHHHHHhCCCeeEEecCCcCcc
Q 016596 260 EFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGV---D-VVSLDWTVDMAEGRRRLGPDVAVQGNVDPGAL 334 (386)
Q Consensus 260 ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~---d-~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l 334 (386)
+.-.+.+.++++.+.+. +.|+++|+-.... .++.+.+.|. . +++.. ..+...+++.+...+-+ .++....
T Consensus 116 ~~q~~~f~~~~~~a~~~--~lPv~iH~~~~~~~~~~il~~~p~~~~~~I~H~~-~g~~~~~~~~~~~g~y~--~~sg~~~ 190 (268)
T 1j6o_A 116 EVQKRVFVEQIELAGKL--NLPLVVHIRDAYSEAYEILRTESLPEKRGVIHAF-SSDYEWAKKFIDLGFLL--GIGGPVT 190 (268)
T ss_dssp HHHHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHHSCCCSSCEEETTC-CSCHHHHHHHHHHTEEE--EECGGGG
T ss_pred HHHHHHHHHHHHHHHHh--CCCEEEEeCchHHHHHHHHHhcCCCCCCEEEEcC-CCCHHHHHHHHHCCCeE--Eeccccc
Confidence 34457777788888887 6899999754444 4677777773 3 33432 24566665554322221 1221111
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 335 FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
+..++ .++++++..+..++++++++..
T Consensus 191 ~~~~~----~l~~~i~~~~~driL~eTD~P~ 217 (268)
T 1j6o_A 191 YPKNE----ALREVVKRVGLEYIVLETDCPF 217 (268)
T ss_dssp CTTCH----HHHHHHHHHCGGGEEECCCBTS
T ss_pred ccchH----HHHHHHHhCChhhEEEecCCCC
Confidence 22223 3556677776568999998753
No 267
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=48.56 E-value=59 Score=31.05 Aligned_cols=85 Identities=13% Similarity=0.183 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEe
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYA 286 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~ 286 (386)
++.+.+...+.++...++|.|+|-|.-.-+ .|+||.. +++ =..+..++++++++..+..++.+-+
T Consensus 166 I~~ii~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGGslen-R~rf~~Eiv~aVr~avg~~~V~vRl 244 (402)
T 2hsa_B 166 ISQVVEDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGGSLAN-RCKFITQVVQAVVSAIGADRVGVRV 244 (402)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCcChhh-hhHHHHHHHHHHHHHhCCCcEEEEe
Confidence 344455555666677889999998764321 1344431 111 1234556677666643212666665
Q ss_pred cCC---------c----c--hHHHHHhcC------CCEEEc
Q 016596 287 SGS---------G----G--LLERLALTG------VDVVSL 306 (386)
Q Consensus 287 cG~---------~----~--~l~~l~e~g------~d~l~~ 306 (386)
... . . +...+.+.| ++.+++
T Consensus 245 s~~~~~~g~~~~~~~~~~~~la~~le~~G~~gg~~vd~i~v 285 (402)
T 2hsa_B 245 SPAIDHLDAMDSNPLSLGLAVVERLNKIQLHSGSKLAYLHV 285 (402)
T ss_dssp CSSCCSTTCCCSCHHHHHHHHHHHHHHHHHHHTSCCSEEEE
T ss_pred ccccccCCCCCCCCHHHHHHHHHHHHhcCCccCCceEEEEE
Confidence 432 1 1 135566788 998876
No 268
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=48.30 E-value=83 Score=32.05 Aligned_cols=80 Identities=23% Similarity=0.412 Sum_probs=53.9
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhH----HHHHHHHHHHHhhCCCCcEEEEecCCc-----c-hH
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSL----PYLKQIVDTVKQTHPDLSLILYASGSG-----G-LL 293 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~----P~~k~l~~~i~~~~~~~~~~~H~cG~~-----~-~l 293 (386)
-++..++|++...+.|-+.+.+-+.|.+-..- .|.. .-+++|++.+|++ |+.+++|..-.. . .+
T Consensus 307 n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~----d~~~~~p~~di~~l~~Ya~~k--gV~i~lw~~~~~~~~~~~~~~ 380 (641)
T 3a24_A 307 NNPTYKAYIDFASANGIEYVILDEGWAVNLQA----DLMQVVKEIDLKELVDYAASK--NVGIILWAGYHAFERDMENVC 380 (641)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEECTTSBCTTSC----CTTCBCTTCCHHHHHHHHHHT--TCEEEEEEEHHHHHTSHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccccCCCC----CccccCCcCCHHHHHHHHHhc--CCEEEEEeeCcchHHHHHHHH
Confidence 34556677777788999999986666531110 0101 2478999999998 678888876431 1 25
Q ss_pred HHHHhcCCCEEEcCCC
Q 016596 294 ERLALTGVDVVSLDWT 309 (386)
Q Consensus 294 ~~l~e~g~d~l~~d~~ 309 (386)
..+.+.|++.+-+|..
T Consensus 381 ~~~~~~Gv~gvK~Df~ 396 (641)
T 3a24_A 381 RHYAEMGVKGFKVDFM 396 (641)
T ss_dssp HHHHHHTCCEEEEECC
T ss_pred HHHHHcCCCEEEECCC
Confidence 7778889999877654
No 269
>3iyg_B T-complex protein 1 subunit beta; TRIC/CCT, asymmetric, cryo-EM, subunit arrangement, acetylation, ATP-binding, chaperone, cytoplasm, isopeptide bond; 4.00A {Bos taurus} PDB: 3ktt_B 4a0o_A 4a0v_A 4a0w_A 4a13_A
Probab=48.23 E-value=74 Score=31.41 Aligned_cols=108 Identities=13% Similarity=0.095 Sum_probs=57.6
Q ss_pred CHHHHHHhh---HHHHHHHHHHHHhhCCCCcEEEEecCCcc-h-HHHHHhcCCCEEEcCCCCCHHHHHHHhC--------
Q 016596 254 SPVDFEEFS---LPYLKQIVDTVKQTHPDLSLILYASGSGG-L-LERLALTGVDVVSLDWTVDMAEGRRRLG-------- 320 (386)
Q Consensus 254 Sp~~f~ef~---~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~-l~~l~e~g~d~l~~d~~~dl~e~~~~~g-------- 320 (386)
|++.+..|. +.+++++++.+.+. |.++ +-+.+... . +..|.+.|+-++..-...+++.+.+..|
T Consensus 247 s~~~l~~~~~~E~~~l~~~le~I~~~--g~~v-vi~~~~I~~~al~~L~~~~I~av~~~~~~~le~ia~~tGa~ii~~l~ 323 (513)
T 3iyg_B 247 STAKVAEIEHAEKEKMKEKVERILKH--GINC-FINRQLIYNYPEQLFGAAGVMAIEHADFVGVERLALVTGGEIASTFD 323 (513)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHhc--CCCE-EEEcCCccHHHHHHHHHcCceEEecCCHHHHHHHHHHhCCEEecccc
Confidence 455665543 56777888888886 4454 44444443 3 6777776665553322223333333222
Q ss_pred --------------------CCeeEEecCC-cC----ccCCCHHHHHHHHHHHHHHc----C----CCCeEEecCCC
Q 016596 321 --------------------PDVAVQGNVD-PG----ALFGSKDFITNRINDTVRKA----G----RWKHILNLGHG 364 (386)
Q Consensus 321 --------------------~~~~l~G~vd-~~----~l~gt~eev~~~v~~~i~~~----~----~~g~Ils~gc~ 364 (386)
+++++.-+.. +. .+.|.-+.+.++.++.++.+ . +++++.+.|+.
T Consensus 324 ~l~~~~LG~a~~v~~~~ig~~~~~~~~g~~~~~~~tI~lrG~t~~~l~E~kr~l~DAl~~~r~av~~~~iVpGGGa~ 400 (513)
T 3iyg_B 324 HPELVKLGSCKLIEEVMIGEDKLIHFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCS 400 (513)
T ss_pred cCCHhHCCcccEEEEEEECCeEEEEEecCCCCceEEEEecCCCHHHHHHHHHHHHHHHHHHHHHHhCCcEEeCCcHH
Confidence 2233333332 21 23677666666677666553 1 45777776654
No 270
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=48.20 E-value=1.3e+02 Score=29.94 Aligned_cols=89 Identities=21% Similarity=0.243 Sum_probs=53.7
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEE
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVV 304 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l 304 (386)
..+.+++++++|+|+|++ |..-+ -|.. ..+.++.+++.+++.++ +.||.. -...|.+.|+|++
T Consensus 282 ~~eR~~aLv~AGvD~ivi-D~ahG-hs~~---------v~~~i~~ik~~~p~~~v---iaGNVaT~e~a~~Li~aGAD~v 347 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVL-DSSQG-NSVY---------QIEFIKWIKQTYPKIDV---IAGNVVTREQAAQLIAAGADGL 347 (556)
T ss_dssp HHHHHHHHHHTTCCEEEE-CCSCC-CSHH---------HHHHHHHHHHHCTTSEE---EEEEECSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHhcCCcEEEE-ecccc-ccHH---------HHHHHHHHHhhCCcceE---EeccccCHHHHHHHHHcCCCEE
Confidence 456778899999999886 43222 2322 24455666666545554 556653 3678889999988
Q ss_pred EcC--CC-------------------CCHHHHHHHhCCCeeEEecCC
Q 016596 305 SLD--WT-------------------VDMAEGRRRLGPDVAVQGNVD 330 (386)
Q Consensus 305 ~~d--~~-------------------~dl~e~~~~~g~~~~l~G~vd 330 (386)
-+. .. .+..++.+.++-.++-=|||-
T Consensus 348 kVGiGpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI~ 394 (556)
T 4af0_A 348 RIGMGSGSICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGIG 394 (556)
T ss_dssp EECSSCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCCC
T ss_pred eecCCCCcccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCcC
Confidence 542 10 134566666665555566663
No 271
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=48.05 E-value=1.2e+02 Score=25.84 Aligned_cols=89 Identities=9% Similarity=0.078 Sum_probs=52.9
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEc--
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSL-- 306 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~-- 306 (386)
+++.+.++|+|.+.+.+... + ...+++++.++++ |....+..-|-.+ ....+.+.|+|.+.+
T Consensus 75 ~~~~~~~aGad~i~vh~~~~----~--------~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~~~ 140 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAH----I--------ATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDLGITQAIYHR 140 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSC----H--------HHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHhcCCCEEEEecCCC----H--------HHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHcCccceeeee
Confidence 55778899999998765332 1 2346677778876 4555543333222 355666779995422
Q ss_pred C-------CCC---CHHHHHHHhCC--CeeEEecCCcCc
Q 016596 307 D-------WTV---DMAEGRRRLGP--DVAVQGNVDPGA 333 (386)
Q Consensus 307 d-------~~~---dl~e~~~~~g~--~~~l~G~vd~~~ 333 (386)
. ... .++.+++..+. .+++.|||++..
T Consensus 141 ~~~~~~~g~~~~~~~l~~i~~~~~~~~pi~v~GGI~~~~ 179 (218)
T 3jr2_A 141 SRDAELAGIGWTTDDLDKMRQLSALGIELSITGGIVPED 179 (218)
T ss_dssp CHHHHHHTCCSCHHHHHHHHHHHHTTCEEEEESSCCGGG
T ss_pred ccccccCCCcCCHHHHHHHHHHhCCCCCEEEECCCCHHH
Confidence 1 111 34566666532 267789998754
No 272
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=47.88 E-value=1.2e+02 Score=28.45 Aligned_cols=66 Identities=9% Similarity=0.169 Sum_probs=41.4
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.++.++++|+|+|.+.-..+ .+ ....+.++.+++.. +.+++...+........+.+.|+|.+.+
T Consensus 107 ~e~a~~l~eaGad~I~ld~a~G---~~--------~~~~~~i~~i~~~~-~~~Vivg~v~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSAHG---HS--------LNIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCSCC---SB--------HHHHHHHHHHHHHC-CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCCCC---Cc--------HHHHHHHHHHHHhc-CCcEEEccCCCHHHHHHHHHcCcCEEEE
Confidence 5678888999999887632221 12 12234455555543 4677765554434567888999998866
No 273
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=47.44 E-value=16 Score=33.35 Aligned_cols=120 Identities=16% Similarity=0.205 Sum_probs=71.5
Q ss_pred HhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCC-cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-
Q 016596 210 AFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSW-ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS- 287 (386)
Q Consensus 210 l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~-~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c- 287 (386)
+|.+||.+.++.+ +.|+|.+-++-.. -+....+ -++=..-+++|-+.+ ++|.++|-.
T Consensus 157 ~yT~Peea~~Fv~--------------~TgvD~LAvaiGt~HG~Y~~~--p~Ld~~~L~~I~~~v-----~vpLVlHGgS 215 (288)
T 3q94_A 157 IYADPAECKHLVE--------------ATGIDCLAPALGSVHGPYKGE--PNLGFAEMEQVRDFT-----GVPLVLHGGT 215 (288)
T ss_dssp BCCCHHHHHHHHH--------------HHCCSEEEECSSCBSSCCSSS--CCCCHHHHHHHHHHH-----CSCEEECCCT
T ss_pred cCCCHHHHHHHHH--------------HHCCCEEEEEcCcccCCcCCC--CccCHHHHHHHHHhc-----CCCEEEeCCC
Confidence 6899998888766 4588877654321 1222110 112222234444444 479999964
Q ss_pred CCcc-hHHHHHhcCCCEEEcCCCCC---HHHHHHHhCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcC
Q 016596 288 GSGG-LLERLALTGVDVVSLDWTVD---MAEGRRRLGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAG 353 (386)
Q Consensus 288 G~~~-~l~~l~e~g~d~l~~d~~~d---l~e~~~~~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~ 353 (386)
|... .+...+++|+.=+|++...- ...+++.+..+- ...||..+ ....+.+++.+++.++.++
T Consensus 216 G~~~e~i~~ai~~Gv~KiNi~Tdl~~a~~~~~r~~~~~~~---~~~dpr~~~~~~~~a~~~~v~~~~~~~g 283 (288)
T 3q94_A 216 GIPTADIEKAISLGTSKINVNTENQIEFTKAVREVLNKDQ---EVYDPRKFIGPGRDAIKATVIGKIREFG 283 (288)
T ss_dssp TCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCS---SCCCTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHcCCeEEEEChHHHHHHHHHHHHHHHhCC---CcCCHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3333 47777888988888875321 123444443211 34677654 6667889999999999886
No 274
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=47.30 E-value=1.3e+02 Score=25.44 Aligned_cols=89 Identities=15% Similarity=0.066 Sum_probs=49.2
Q ss_pred EEEecCCcchHHHHHhcCCCEEEc----C--------CCCCH---HHHHHHhC-CCeeEEecCCcCccCCCHHHHHHHHH
Q 016596 283 ILYASGSGGLLERLALTGVDVVSL----D--------WTVDM---AEGRRRLG-PDVAVQGNVDPGALFGSKDFITNRIN 346 (386)
Q Consensus 283 ~~H~cG~~~~l~~l~e~g~d~l~~----d--------~~~dl---~e~~~~~g-~~~~l~G~vd~~~l~gt~eev~~~v~ 346 (386)
+-..|.+..-+....+.|+|.+-+ + ...++ .++++.++ -.+...|||++. ++ .
T Consensus 119 ~~~s~~t~~e~~~a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~~~pvia~GGI~~~-------nv----~ 187 (227)
T 2tps_A 119 LGVSAHTMSEVKQAEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGISIPIVGIGGITID-------NA----A 187 (227)
T ss_dssp EEEEECSHHHHHHHHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTCCCCEEEESSCCTT-------TS----H
T ss_pred EEEecCCHHHHHHHHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCCCCCEEEEcCCCHH-------HH----H
Confidence 334454433344455789998763 2 11233 44555555 457778999753 22 3
Q ss_pred HHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhh
Q 016596 347 DTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 347 ~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
++++ .+-.|++++++---..+ |.+.++++.++++++
T Consensus 188 ~~~~-~Ga~gv~vgs~i~~~~d-~~~~~~~~~~~~~~~ 223 (227)
T 2tps_A 188 PVIQ-AGADGVSMISAISQAED-PESAARKFREEIQTY 223 (227)
T ss_dssp HHHH-TTCSEEEESHHHHTSSC-HHHHHHHHHHHHHHH
T ss_pred HHHH-cCCCEEEEhHHhhcCCC-HHHHHHHHHHHHHhc
Confidence 3333 34346666654211222 458999999888875
No 275
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=47.27 E-value=47 Score=33.82 Aligned_cols=85 Identities=16% Similarity=0.318 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhh-CCCCcEEEE
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQT-HPDLSLILY 285 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~-~~~~~~~~H 285 (386)
++.+.+...+.++...++|.|+|-+.-.-+ .|+||.. ++. =..+..++++++++. +++.++.+-
T Consensus 136 i~~~i~~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGgs~~~-r~r~~~eiv~avr~~vG~~~~v~vr 214 (671)
T 1ps9_A 136 ILQLIDNFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGGDYRN-RMRFAVEVVRAVRERVGNDFIIIYR 214 (671)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSSSHHH-HHHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCCcHHH-HHHHHHHHHHHHHHHcCCCceEEEE
Confidence 333444455566677889999998754322 1444421 111 133456666666654 234565553
Q ss_pred ec-------CCcc-----hHHHHHhcCCCEEEc
Q 016596 286 AS-------GSGG-----LLERLALTGVDVVSL 306 (386)
Q Consensus 286 ~c-------G~~~-----~l~~l~e~g~d~l~~ 306 (386)
+. |... +...+.+.|+|.+++
T Consensus 215 ls~~~~~~~g~~~~~~~~~a~~l~~~g~d~i~v 247 (671)
T 1ps9_A 215 LSMLDLVEDGGTFAETVELAQAIEAAGATIINT 247 (671)
T ss_dssp EEEECCSTTCCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred ECccccCCCCCCHHHHHHHHHHHHhcCCCEEEc
Confidence 32 3221 235667789999975
No 276
>3ixl_A Amdase, arylmalonate decarboxylase; enantioselective decarboxylation, lyase; HET: CME PAC; 1.45A {Bordetella bronchiseptica} PDB: 3ixm_A 2vlb_A 3dg9_A 3ip8_A* 3dtv_A* 3eis_A*
Probab=47.10 E-value=54 Score=28.76 Aligned_cols=130 Identities=12% Similarity=0.073 Sum_probs=71.2
Q ss_pred HHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCC
Q 016596 223 KFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVD 302 (386)
Q Consensus 223 ~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d 302 (386)
.+.+.+.+.++.+.++|+|+|.++=.+++++. ...+.+++.+.+++.. ++| ++|+-.. ..+.+...|+.
T Consensus 50 ~~~~~l~~aa~~L~~ag~d~i~~aCtsas~~~-------G~~~~~~~~~~l~~~~-~iP-v~~~~~A--~~~al~~~g~~ 118 (240)
T 3ixl_A 50 AVIESVVDHARRLQKQGAAVVSLMCTSLSFYR-------GAAFNAALTVAMREAT-GLP-CTTMSTA--VLNGLRALGVR 118 (240)
T ss_dssp HHGGGHHHHHHHHHHTTEEEEEECCHHHHHTT-------CHHHHHHHHHHHHHHH-SSC-EEEHHHH--HHHHHHHTTCS
T ss_pred HHHHHHHHHHHHhccCCCCEEEECCcHHHHhc-------ccchHHHHHHHHHhcc-CCC-EECHHHH--HHHHHHHhCCC
Confidence 34455666777788899999988544444321 2345556666666643 567 4565322 35667777766
Q ss_pred EEEcC--CCCCHHHH-HH---HhCCCeeEEecCCcCc---c-CCCHHHHHHHHHHHH-HHcCCCCeEEecCCCC
Q 016596 303 VVSLD--WTVDMAEG-RR---RLGPDVAVQGNVDPGA---L-FGSKDFITNRINDTV-RKAGRWKHILNLGHGI 365 (386)
Q Consensus 303 ~l~~d--~~~dl~e~-~~---~~g~~~~l~G~vd~~~---l-~gt~eev~~~v~~~i-~~~~~~g~Ils~gc~i 365 (386)
-+.+- +..++.+. ++ ..|=.+....+.+-.. + .-+++++.+.+++++ +.-+-...||+ |.=
T Consensus 119 rvglltpy~~~~~~~~~~~l~~~Giev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~adaivL~--CT~ 190 (240)
T 3ixl_A 119 RVALATAYIDDVNERLAAFLAEESLVPTGCRSLGITGVEAMARVDTATLVDLCVRAFEAAPDSDGILLS--SGG 190 (240)
T ss_dssp EEEEEESSCHHHHHHHHHHHHHTTCEEEEEEECCCCCHHHHHTCCHHHHHHHHHHHHHTSTTCSEEEEE--CTT
T ss_pred EEEEEeCChHHHHHHHHHHHHHCCCEEeccccCCCCCcchhhcCCHHHHHHHHHHHhhcCCCCCEEEEe--CCC
Confidence 54432 22233222 22 2343333344433221 2 457888888888844 33333577776 753
No 277
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=47.10 E-value=96 Score=26.84 Aligned_cols=28 Identities=14% Similarity=0.135 Sum_probs=16.1
Q ss_pred HHHHHhcCCCEEEcC---------CCCCHHHHHHHhC
Q 016596 293 LERLALTGVDVVSLD---------WTVDMAEGRRRLG 320 (386)
Q Consensus 293 l~~l~e~g~d~l~~d---------~~~dl~e~~~~~g 320 (386)
++.+.++|++.+.+. ...++.++++.+.
T Consensus 20 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~ 56 (278)
T 1i60_A 20 LELCEKHGYDYIEIRTMDKLPEYLKDHSLDDLAEYFQ 56 (278)
T ss_dssp HHHHHHTTCSEEEEETTTHHHHHTTSSCHHHHHHHHH
T ss_pred HHHHHHhCCCEEEEccHHHHHHHhccCCHHHHHHHHH
Confidence 566667777766443 1245666666554
No 278
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=46.19 E-value=87 Score=27.46 Aligned_cols=81 Identities=14% Similarity=0.183 Sum_probs=46.4
Q ss_pred HHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcCCC-----CCHHHHHHHhCCCeeE-EecCCcCccCCCHH
Q 016596 268 QIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLDWT-----VDMAEGRRRLGPDVAV-QGNVDPGALFGSKD 339 (386)
Q Consensus 268 ~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d~~-----~dl~e~~~~~g~~~~l-~G~vd~~~l~gt~e 339 (386)
++.+.+.+.+ -++++-....+.. +.+.+.+-|+.++.+... ..++++++.+++ +++ .|.| + |.+
T Consensus 26 ~~~~~l~~~~-vv~Vir~~~~~~a~~~a~al~~gGi~~iEvt~~t~~a~e~I~~l~~~~~~-~~iGaGTV----l--t~~ 97 (232)
T 4e38_A 26 TINNQLKALK-VIPVIAIDNAEDIIPLGKVLAENGLPAAEITFRSDAAVEAIRLLRQAQPE-MLIGAGTI----L--NGE 97 (232)
T ss_dssp HHHHHHHHHC-EEEEECCSSGGGHHHHHHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTT-CEEEEECC----C--SHH
T ss_pred HHHHHHHhCC-EEEEEEcCCHHHHHHHHHHHHHCCCCEEEEeCCCCCHHHHHHHHHHhCCC-CEEeECCc----C--CHH
Confidence 4667777652 2343333333332 357888889999986432 246778888875 333 3433 1 333
Q ss_pred HHHHHHHHHHHHcCCCCeEEecC
Q 016596 340 FITNRINDTVRKAGRWKHILNLG 362 (386)
Q Consensus 340 ev~~~v~~~i~~~~~~g~Ils~g 362 (386)
+++.+++.+ -.||.+|+
T Consensus 98 ----~a~~Ai~AG--A~fIvsP~ 114 (232)
T 4e38_A 98 ----QALAAKEAG--ATFVVSPG 114 (232)
T ss_dssp ----HHHHHHHHT--CSEEECSS
T ss_pred ----HHHHHHHcC--CCEEEeCC
Confidence 455555554 46888765
No 279
>3rhg_A Putative phophotriesterase; hydrolase, amidohydrolase, zinc binding site, enzyme functio initiative, EFI; HET: SO4; 1.53A {Proteus mirabilis}
Probab=46.15 E-value=1.5e+02 Score=27.81 Aligned_cols=100 Identities=14% Similarity=0.047 Sum_probs=60.7
Q ss_pred HHHHHHHHHHhhCCCCcEEEEecC--Ccc--hHHHHHhc-CCC---E-E-EcCCC-CCHHHHHHHh--CCCeeEEecCCc
Q 016596 265 YLKQIVDTVKQTHPDLSLILYASG--SGG--LLERLALT-GVD---V-V-SLDWT-VDMAEGRRRL--GPDVAVQGNVDP 331 (386)
Q Consensus 265 ~~k~l~~~i~~~~~~~~~~~H~cG--~~~--~l~~l~e~-g~d---~-l-~~d~~-~dl~e~~~~~--g~~~~l~G~vd~ 331 (386)
.++..++..++.. |.|+++|+.+ ... .++.+.+. |++ + + +.+.. .|++.+++.+ |-.+.+-|..-.
T Consensus 180 ~f~aq~~~A~~~~-glPV~iH~~r~~~a~~e~l~iL~e~~~~~~~~vvi~H~~rs~~~~e~a~~~l~~G~~I~~~g~g~~ 258 (365)
T 3rhg_A 180 SLRAAALAQNNNP-YASMNIHMPGWQRRGDEVLDILLTEMGCDPAKISLAHSDPSGKDIDYQCKMLDRGVWLEFDMIGLD 258 (365)
T ss_dssp HHHHHHHHHTTCT-TCEEEEECCTTSCCHHHHHHHHTTTTCCCGGGEEESCCGGGTTCHHHHHHHHHTTCEEEECCTTCC
T ss_pred HHHHHHHHHHHhc-CCcEEEECCCCCcCHHHHHHHHHhccCCCCCceEEecCCCCCCCHHHHHHHHhCCCEEEecCCCcc
Confidence 3455566666652 5799999744 333 46888776 765 2 2 55533 6888887754 554555442100
Q ss_pred Ccc-----CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 332 GAL-----FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 332 ~~l-----~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
... ..+.++-.+.++++++.+.....+|++++.-
T Consensus 259 ~tf~~~~~~~~d~~~a~~l~~li~~g~~drilleTD~p~ 297 (365)
T 3rhg_A 259 ISFPKEGAAPSVMDTVEAVATLIERGYGNQIVLSHDVFL 297 (365)
T ss_dssp CBCSSSCBCCCHHHHHHHHHHHHHTTCGGGEEECCCCCS
T ss_pred ccccccccccchHHHHHHHHHHHHhCCCCcEEEeCCCCC
Confidence 011 1245556677888888765568999998864
No 280
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=46.12 E-value=1.6e+02 Score=27.40 Aligned_cols=92 Identities=16% Similarity=0.192 Sum_probs=52.0
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCC-CCHHHHHHhhHHHHHHHHH-HHHhhCCCCcEEEEecC---C-cc--hHHHH-Hhc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATE-LSPVDFEEFSLPYLKQIVD-TVKQTHPDLSLILYASG---S-GG--LLERL-ALT 299 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~-iSp~~f~ef~~P~~k~l~~-~i~~~~~~~~~~~H~cG---~-~~--~l~~l-~e~ 299 (386)
++.++...++|+|++.+.-|...- .|. +=+.-|++.+.+ +. +.|++++..- . .. .+..| .+.
T Consensus 108 i~la~~A~~~Gadavlv~~P~y~~~~s~----~~l~~~f~~IA~aa~-----~lPiilYn~P~tg~~l~~e~~~~L~a~~ 178 (344)
T 2hmc_A 108 VAHAVHAQKVGAKGLMVIPRVLSRGSVI----AAQKAHFKAILSAAP-----EIPAVIYNSPYYGFATRADLFFALRAEH 178 (344)
T ss_dssp HHHHHHHHHHTCSEEEECCCCSSSTTCH----HHHHHHHHHHHHHST-----TSCEEEEEBGGGTBCCCHHHHHHHHHHC
T ss_pred HHHHHHHHhcCCCEEEECCCccCCCCCH----HHHHHHHHHHHhhCC-----CCcEEEEecCccCCCcCHHHHHHHHhcC
Confidence 455556677899999887665433 443 345557777777 33 4688877653 2 12 23444 554
Q ss_pred CCCEEEc-CCCC--CHHHHHHHh---CCCeeEEecCC
Q 016596 300 GVDVVSL-DWTV--DMAEGRRRL---GPDVAVQGNVD 330 (386)
Q Consensus 300 g~d~l~~-d~~~--dl~e~~~~~---g~~~~l~G~vd 330 (386)
+ +++.+ +... |+..+.+.. +++..+..|-|
T Consensus 179 p-nIvGiKdssgp~d~~~~~~~~~~~~~~f~v~~G~D 214 (344)
T 2hmc_A 179 K-NLVGFKEFGGPADMRYAAENITSRDDEVTLMIGVD 214 (344)
T ss_dssp T-TEEEEEECSCHHHHHHHHHHTSCSSSSCEEEECSG
T ss_pred C-CEEEEEcCCCCCCHHHHHHHHHHcCCCEEEEECcH
Confidence 3 56665 4445 666665543 33444444443
No 281
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=45.24 E-value=68 Score=27.83 Aligned_cols=92 Identities=7% Similarity=0.040 Sum_probs=47.3
Q ss_pred HHHHHhcCCCEEEcC--C-------CCCHHHHHHHhCCC-eeEEecCCc-CccCCCHHHHHHHHHHHHHHcC--CCCeEE
Q 016596 293 LERLALTGVDVVSLD--W-------TVDMAEGRRRLGPD-VAVQGNVDP-GALFGSKDFITNRINDTVRKAG--RWKHIL 359 (386)
Q Consensus 293 l~~l~e~g~d~l~~d--~-------~~dl~e~~~~~g~~-~~l~G~vd~-~~l~gt~eev~~~v~~~i~~~~--~~g~Il 359 (386)
++.+.++|++.+.+. . ..++.++++.+.+. +.+.+ +.. ..+....++.++..++.++.+. |..+|.
T Consensus 25 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~-~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~v~ 103 (272)
T 2q02_A 25 FRLVKRLEFNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVT-INAVYPFNQLTEEVVKKTEGLLRDAQGVGARALV 103 (272)
T ss_dssp HHHHHHTTCCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEE-EEEETTTTSCCHHHHHHHHHHHHHHHHHTCSEEE
T ss_pred HHHHHHcCCCEEEeeccccccccccccCHHHHHHHHHHcCCeEEe-chhhhccCCcHHHHHHHHHHHHHHHHHhCCCEEE
Confidence 567778888877542 1 13455555554321 22211 111 1122223566777888888765 544443
Q ss_pred -ecCCCCCC--CCc-HHHHHHHHHHHHhhc
Q 016596 360 -NLGHGIKV--GTP-EENVAHFFEVAKAIR 385 (386)
Q Consensus 360 -s~gc~i~~--~tp-~Eni~a~~~a~~~yg 385 (386)
.+|..-+. ..- .++++.+.+.++++|
T Consensus 104 ~~~g~~~~~~~~~~~~~~l~~l~~~a~~~g 133 (272)
T 2q02_A 104 LCPLNDGTIVPPEVTVEAIKRLSDLFARYD 133 (272)
T ss_dssp ECCCCSSBCCCHHHHHHHHHHHHHHHHTTT
T ss_pred EccCCCchhHHHHHHHHHHHHHHHHHHHcC
Confidence 44432110 111 667777777777776
No 282
>1ass_A Thermosome; chaperonin, HSP60, TCP1, groel, thermoplasma ACI ATP-binding; 2.30A {Thermoplasma acidophilum} SCOP: c.8.5.2 PDB: 1asx_A
Probab=45.18 E-value=39 Score=27.73 Aligned_cols=67 Identities=19% Similarity=0.260 Sum_probs=49.9
Q ss_pred CCHHHHHHhh---HHHHHHHHHHHHhhCCCCcEEEEecCCcc-h-HHHHHhcCCCEEEcCCCCCHHHHHHHhCCC
Q 016596 253 LSPVDFEEFS---LPYLKQIVDTVKQTHPDLSLILYASGSGG-L-LERLALTGVDVVSLDWTVDMAEGRRRLGPD 322 (386)
Q Consensus 253 iSp~~f~ef~---~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~-l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~ 322 (386)
=|++.++++. +.++++.++.+.+.| +.++-+-+... . ++.|.+.|+-++-.-...|++.+.+..|.+
T Consensus 45 ~~~~~~~~~~~~E~~~l~~~v~kI~~~g---~nVVl~~k~I~d~a~~~l~k~gI~~v~~v~~~dleria~atGa~ 116 (159)
T 1ass_A 45 SDPSKIQDFLNQETNTFKQMVEKIKKSG---ANVVLCQKGIDDVAQHYLAKEGIYAVRRVKKSDMEKLAKATGAK 116 (159)
T ss_dssp SCGGGHHHHHHHHHHHHHHHHHHHHHTT---CSEEEESSCBCHHHHHHHHHTTCEEECSCCHHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhhhhCC---CeEEEECCccCHHHHHHHHHCCCEEEccCCHHHHHHHHHHhCCe
Confidence 3555665544 678889999999874 34555656665 4 799999998888666567999999999975
No 283
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=45.00 E-value=44 Score=31.85 Aligned_cols=67 Identities=28% Similarity=0.398 Sum_probs=44.8
Q ss_pred HHhCCCEEEEecCCcC---------CCCHHHHHHhhHHH-HHHHHHHHHhhCCCCcEEEEec-CC-----------cc--
Q 016596 236 ADNGAQAVQIFDSWAT---------ELSPVDFEEFSLPY-LKQIVDTVKQTHPDLSLILYAS-GS-----------GG-- 291 (386)
Q Consensus 236 ~e~G~d~i~i~d~~~~---------~iSp~~f~ef~~P~-~k~l~~~i~~~~~~~~~~~H~c-G~-----------~~-- 291 (386)
.++|.+.+.|-|.|.+ ..+|+. +|. +|.+++.+|++ |....+|.. |. ..
T Consensus 41 ~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~k-----FP~Gl~~l~~~i~~~--Glk~Giw~~pg~~tc~~~pg~~~~~~~ 113 (397)
T 3a5v_A 41 KDLGYNYVIIDDCWQKNERESSKTLLADPTK-----FPRGIKPLVDDIHNL--GLKAGIYSSAGTLTCGGHIASLGYEDI 113 (397)
T ss_dssp HHHTCCEEECCSSCBCSSCCTTSCCCBCTTT-----CTTCHHHHHHHHHHT--TCEEEEEEESSSBCTTSCBCCTTCHHH
T ss_pred cccCceEEEECCCcCCCCCCCCCCeEEChhc-----CCcCHHHHHHHHHHc--CCEEEEEecCCCCccCCCHHHHHHHHH
Confidence 3589999887555532 233332 366 89999999998 567677654 21 11
Q ss_pred hHHHHHhcCCCEEEcCCC
Q 016596 292 LLERLALTGVDVVSLDWT 309 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d~~ 309 (386)
....+.+.|+|.+-+|..
T Consensus 114 ~~~~~~~wGvdyvK~D~~ 131 (397)
T 3a5v_A 114 DAKTWAKWGIDYLKYDNC 131 (397)
T ss_dssp HHHHHHHHTCCEEEEECT
T ss_pred HHHHHHHcCCCEEEECCC
Confidence 246778899999987754
No 284
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=44.81 E-value=59 Score=28.85 Aligned_cols=90 Identities=10% Similarity=0.127 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHhhCCCCcEE-EEecCCcc-hHHHHHhcCCC---EEEcCCCCCHHHHHHHhCC--CeeEEecCCcCccC
Q 016596 263 LPYLKQIVDTVKQTHPDLSLI-LYASGSGG-LLERLALTGVD---VVSLDWTVDMAEGRRRLGP--DVAVQGNVDPGALF 335 (386)
Q Consensus 263 ~P~~k~l~~~i~~~~~~~~~~-~H~cG~~~-~l~~l~e~g~d---~l~~d~~~dl~e~~~~~g~--~~~l~G~vd~~~l~ 335 (386)
...+++.++.+++. +.|++ +|+-.... .++.+.+.+.. +++.- ..+.+++++.+.- .+.+.|.+ +
T Consensus 103 ~~~F~~ql~lA~e~--~lPviSiH~r~a~~~~~~il~~~~~~~~~v~H~f-sG~~e~a~~~l~~G~yis~~g~~----~- 174 (254)
T 3gg7_A 103 FAVFQHILRRCEDH--GGRILSIHSRRAESEVLNCLEANPRSGTPILHWY-SGSVTELRRAISLGCWFSVGPTM----V- 174 (254)
T ss_dssp HHHHHHHHHHHHHT--TCEEEEEECTTCHHHHHHHHHHCGGGEEEEEETC-CSCHHHHHHHHHTTCEEEECHHH----H-
T ss_pred HHHHHHHHHHHHHc--CCCEEEEEcCCcHHHHHHHHHHcCCCCcEEEEeC-CCCHHHHHHHHcCCcEEEECccc----C-
Confidence 44667777777776 67998 99976665 57877776532 45533 3467777766532 23333322 1
Q ss_pred CCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 336 GSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 336 gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
.. +..+++++...-.++++.+++..
T Consensus 175 -~~----~~~~~~v~~ip~drlLlETD~P~ 199 (254)
T 3gg7_A 175 -RT----QKGAALIRSMPRDRVLTETDGPF 199 (254)
T ss_dssp -TS----HHHHHHHHHSCGGGEEECCCTTT
T ss_pred -ch----HHHHHHHHHcCCCeEEEeCCCCc
Confidence 12 23456666666458889888864
No 285
>2d2r_A Undecaprenyl pyrophosphate synthase; prenyltransferase, transferase; 1.88A {Helicobacter pylori} PDB: 2dtn_A
Probab=44.73 E-value=1.6e+02 Score=25.90 Aligned_cols=64 Identities=14% Similarity=0.131 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHhCCCEEEEec-CCcCCCCH----HHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchH
Q 016596 226 TSMAKYVQYQADNGAQAVQIFD-SWATELSP----VDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLL 293 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d-~~~~~iSp----~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l 293 (386)
+.+.+.++...+.|+..+.+.. +..++=.| +..-+.+..++++.++.+++. + +-++..|+...+
T Consensus 46 ~~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~--~--vrl~~iG~~~~l 114 (245)
T 2d2r_A 46 KTLKDITIWCANHKLECLTLYAFSTENWKRPKSEVDFLMKMLKKYLKDERSTYLDN--N--IRFRAIGDLEGF 114 (245)
T ss_dssp HHHHHHHHHHHTTTCSEEEEECC----------CHHHHHHHHHHHHHHHHHHHHHT--T--CEEEEESCGGGS
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc--C--eEEEEecChhhC
Confidence 3444555567788999988766 33232222 333456777777777778775 3 467778987643
No 286
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=44.57 E-value=1.5e+02 Score=25.52 Aligned_cols=107 Identities=12% Similarity=0.023 Sum_probs=0.0
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT 309 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~ 309 (386)
+.++..+++|||++...... ..+++..++. |.+.+.= |.+..-+....+.|+|.+.+.+.
T Consensus 80 d~~~~A~~aGAd~v~~p~~d-----------------~~v~~~ar~~--g~~~i~G-v~t~~e~~~A~~~Gad~vk~Fpa 139 (224)
T 1vhc_A 80 EQVVLAKSSGADFVVTPGLN-----------------PKIVKLCQDL--NFPITPG-VNNPMAIEIALEMGISAVKFFPA 139 (224)
T ss_dssp HHHHHHHHHTCSEEECSSCC-----------------HHHHHHHHHT--TCCEECE-ECSHHHHHHHHHTTCCEEEETTT
T ss_pred HHHHHHHHCCCCEEEECCCC-----------------HHHHHHHHHh--CCCEEec-cCCHHHHHHHHHCCCCEEEEeeC
Q ss_pred CCH------HHHHHHh-CCCeeEEecCCcCc----c-C-------------------CCHHHHHHHHHHHHHHcCCCC
Q 016596 310 VDM------AEGRRRL-GPDVAVQGNVDPGA----L-F-------------------GSKDFITNRINDTVRKAGRWK 356 (386)
Q Consensus 310 ~dl------~e~~~~~-g~~~~l~G~vd~~~----l-~-------------------gt~eev~~~v~~~i~~~~~~g 356 (386)
..+ ++++..+ +-.++-.|||++.. + . ++.+++.+.+++.++....||
T Consensus 140 ~~~gG~~~lk~l~~~~~~ipvvaiGGI~~~N~~~~l~agga~~v~gS~i~~~~~i~~~~~~~i~~~a~~~~~~~~~~~ 217 (224)
T 1vhc_A 140 EASGGVKMIKALLGPYAQLQIMPTGGIGLHNIRDYLAIPNIVACGGSWFVEKKLIQSNNWDEIGRLVREVIDIIKEGG 217 (224)
T ss_dssp TTTTHHHHHHHHHTTTTTCEEEEBSSCCTTTHHHHHTSTTBCCEEECGGGCHHHHHTTCHHHHHHHHHHHHHHHTC--
T ss_pred ccccCHHHHHHHHhhCCCCeEEEECCcCHHHHHHHHhcCCCEEEEEchhcCcchhccCCHHHHHHHHHHHHHHHHhcC
No 287
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=44.54 E-value=1.3e+02 Score=26.20 Aligned_cols=103 Identities=8% Similarity=0.084 Sum_probs=59.6
Q ss_pred HHHHHH---HHHhhCCCCcEEEEecCCcc--hHHHHHhcC-CCEE---EcCCC------C-----CHHHHHHHhC-CCee
Q 016596 266 LKQIVD---TVKQTHPDLSLILYASGSGG--LLERLALTG-VDVV---SLDWT------V-----DMAEGRRRLG-PDVA 324 (386)
Q Consensus 266 ~k~l~~---~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g-~d~l---~~d~~------~-----dl~e~~~~~g-~~~~ 324 (386)
..+.++ .+++. |....+=++..+. .+..+.++| +|.+ +++.. . .++++++..+ -.+.
T Consensus 100 ~~~~i~~~~~i~~~--G~k~gvalnp~tp~~~~~~~l~~g~~D~VlvmsV~pGf~gq~f~~~~l~ki~~lr~~~~~~~I~ 177 (227)
T 1tqx_A 100 TERCIQLAKEIRDN--NLWCGISIKPKTDVQKLVPILDTNLINTVLVMTVEPGFGGQSFMHDMMGKVSFLRKKYKNLNIQ 177 (227)
T ss_dssp HHHHHHHHHHHHTT--TCEEEEEECTTSCGGGGHHHHTTTCCSEEEEESSCTTCSSCCCCGGGHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHHHHHHc--CCeEEEEeCCCCcHHHHHHHhhcCCcCEEEEeeeccCCCCcccchHHHHHHHHHHHhccCCeEE
Confidence 446677 88887 4565665554443 477777876 8876 43321 1 2466777664 2366
Q ss_pred EEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 325 VQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 325 l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
+-|||++ + .++++++.+.+ .+|.+++--=.++ |.++++.+.+..++
T Consensus 178 VdGGI~~-------~----ti~~~~~aGAd-~~V~GsaIf~~~d-~~~~i~~l~~~~~~ 223 (227)
T 1tqx_A 178 VDGGLNI-------E----TTEISASHGAN-IIVAGTSIFNAED-PKYVIDTMRVSVQK 223 (227)
T ss_dssp EESSCCH-------H----HHHHHHHHTCC-EEEESHHHHTCSS-HHHHHHHHHHHHHH
T ss_pred EECCCCH-------H----HHHHHHHcCCC-EEEEeHHHhCCCC-HHHHHHHHHHHHHH
Confidence 6888865 2 34455554433 5555443111123 77888888776654
No 288
>2xio_A Putative deoxyribonuclease tatdn1; hydrolase; 1.19A {Homo sapiens}
Probab=44.40 E-value=1.7e+02 Score=26.07 Aligned_cols=91 Identities=14% Similarity=0.146 Sum_probs=55.4
Q ss_pred hHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCC---C-EEEcCCCCCHHHHHHHhCCC--eeEEecCCcCcc
Q 016596 262 SLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGV---D-VVSLDWTVDMAEGRRRLGPD--VAVQGNVDPGAL 334 (386)
Q Consensus 262 ~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~---d-~l~~d~~~dl~e~~~~~g~~--~~l~G~vd~~~l 334 (386)
-.+.+++.++.+++. +.|+++|+-.... .++.+.+.+. . ++++. ..+.+.+++.+... +.+.| . .
T Consensus 125 Q~~~f~~ql~lA~~~--~lPv~iH~r~a~~~~~~il~~~~~~~~~~i~H~f-~g~~~~~~~~l~~g~yi~~~g-~----~ 196 (301)
T 2xio_A 125 QLKYFEKQFELSEQT--KLPMFLHCRNSHAEFLDITKRNRDRCVGGVVHSF-DGTKEAAAALIDLDLYIGFNG-C----S 196 (301)
T ss_dssp HHHHHHHTHHHHHHH--CCCEEEEEESCHHHHHHHHHHTGGGSSCEEETTC-CCCHHHHHHHHHTTCEEEECG-G----G
T ss_pred HHHHHHHHHHHHHHh--CCcEEEEecCchHHHHHHHHhccCCCCcEEEEcc-CCCHHHHHHHHhcCcEEEEcc-c----c
Confidence 346777788888887 6899999854444 4677777652 3 33443 34777777765322 33322 1 1
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 335 FGSKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
+.+.+ .+++++.....++++.+++..
T Consensus 197 ~~~~~-----~~~~~~~~p~drlLleTD~P~ 222 (301)
T 2xio_A 197 LKTEA-----NLEVLKSIPSEKLMIETDAPW 222 (301)
T ss_dssp SSSHH-----HHHHHHTSCGGGEEECCCTTS
T ss_pred cCChH-----HHHHHHhCChHHEEEecCCCc
Confidence 23332 235666655568999998864
No 289
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=43.86 E-value=98 Score=28.42 Aligned_cols=82 Identities=16% Similarity=0.218 Sum_probs=49.8
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT 309 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~ 309 (386)
+.++...++|+|+|.+.... | .++++.+++. +.+++ +.+........+.+.|+|.+.++..
T Consensus 79 ~~~~~a~~~g~d~V~~~~g~-----p-----------~~~i~~l~~~--g~~v~-~~v~~~~~a~~~~~~GaD~i~v~g~ 139 (332)
T 2z6i_A 79 DIVDLVIEEGVKVVTTGAGN-----P-----------SKYMERFHEA--GIIVI-PVVPSVALAKRMEKIGADAVIAEGM 139 (332)
T ss_dssp HHHHHHHHTTCSEEEECSSC-----G-----------GGTHHHHHHT--TCEEE-EEESSHHHHHHHHHTTCSCEEEECT
T ss_pred HHHHHHHHCCCCEEEECCCC-----h-----------HHHHHHHHHc--CCeEE-EEeCCHHHHHHHHHcCCCEEEEECC
Confidence 45566778999999875431 2 2345666665 46655 4444444456777889998866321
Q ss_pred ---------CC---HHHHHHHhCCCeeEEecCC
Q 016596 310 ---------VD---MAEGRRRLGPDVAVQGNVD 330 (386)
Q Consensus 310 ---------~d---l~e~~~~~g~~~~l~G~vd 330 (386)
.+ +.++++.+.-.+...|||.
T Consensus 140 ~~GG~~g~~~~~~ll~~i~~~~~iPViaaGGI~ 172 (332)
T 2z6i_A 140 EAGGHIGKLTTMTLVRQVATAISIPVIAAGGIA 172 (332)
T ss_dssp TSSEECCSSCHHHHHHHHHHHCSSCEEEESSCC
T ss_pred CCCCCCCCccHHHHHHHHHHhcCCCEEEECCCC
Confidence 12 2455555554566778874
No 290
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=43.84 E-value=75 Score=28.79 Aligned_cols=64 Identities=16% Similarity=0.184 Sum_probs=41.4
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d 307 (386)
+.++..+++|+|.|++ |. ++|++.++.+ +.+++.++. +.+-.-|..+ .+..++++|+|++++.
T Consensus 205 eea~eal~aGaD~I~L-Dn----~~~~~~~~~v--------~~l~~~~~~--v~ieaSGGIt~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 205 EQLDAVLPEKPELILL-DN----FAVWQTQTAV--------QRRDSRAPT--VMLESSGGLSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHHGGGCCSEEEE-ET----CCHHHHHHHH--------HHHHHHCTT--CEEEEESSCCTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHHcCCCEEEE-CC----CCHHHHHHHH--------HHhhccCCC--eEEEEECCCCHHHHHHHHhcCCCEEEEC
Confidence 3445556689998775 44 6776655543 344442212 3456667775 4999999999999875
Q ss_pred C
Q 016596 308 W 308 (386)
Q Consensus 308 ~ 308 (386)
.
T Consensus 270 ~ 270 (284)
T 1qpo_A 270 A 270 (284)
T ss_dssp G
T ss_pred H
Confidence 4
No 291
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=43.74 E-value=1.7e+02 Score=27.40 Aligned_cols=62 Identities=10% Similarity=0.065 Sum_probs=39.5
Q ss_pred HHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC---------CC---HHHHHHHhCCCe--eEEecCC
Q 016596 268 QIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT---------VD---MAEGRRRLGPDV--AVQGNVD 330 (386)
Q Consensus 268 ~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~---------~d---l~e~~~~~g~~~--~l~G~vd 330 (386)
+.+..+++.. +.|+++-.+-.......+.+.|+|.+.+... .+ +.++++.+++++ ...|||.
T Consensus 215 ~~i~~l~~~~-~~pv~vK~~~~~e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~ 290 (370)
T 1gox_A 215 KDVAWLQTIT-SLPILVKGVITAEDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVR 290 (370)
T ss_dssp HHHHHHHHHC-CSCEEEECCCSHHHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCC
T ss_pred HHHHHHHHHh-CCCEEEEecCCHHHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCC
Confidence 5567776665 5788775553333467888999999977431 22 567777776444 4456774
No 292
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=43.05 E-value=84 Score=30.77 Aligned_cols=67 Identities=24% Similarity=0.177 Sum_probs=41.5
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.+++++++|+|.|.+. ...+ - .+...++++.+++..++.+++.-.+........+.+.|+|.+.+
T Consensus 231 ~~~a~~l~~aG~d~I~id-~a~g-~---------~~~~~~~v~~i~~~~p~~~Vi~g~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 231 GERVAALVAAGVDVVVVD-TAHG-H---------SKGVIERVRWVKQTFPDVQVIGGNIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHHTTCSEEEEE-CSCC-S---------BHHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHhhcccceEEec-ccCC-c---------chhHHHHHHHHHHHCCCceEEEeeeCcHHHHHHHHHcCCCEEEE
Confidence 455777889999988763 2222 1 22334556666665445676652222223467788999999875
No 293
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=42.96 E-value=1.1e+02 Score=27.32 Aligned_cols=48 Identities=6% Similarity=-0.042 Sum_probs=29.2
Q ss_pred CCHHHHHHHHHHHHHHcC--CCCeEEecCCCCCCCCcHHH-------HHHHHHHHHhhc
Q 016596 336 GSKDFITNRINDTVRKAG--RWKHILNLGHGIKVGTPEEN-------VAHFFEVAKAIR 385 (386)
Q Consensus 336 gt~eev~~~v~~~i~~~~--~~g~Ils~gc~i~~~tp~En-------i~a~~~a~~~yg 385 (386)
+..++..+.+++.++.+. |..+|..++ .++....+. ++.+.+.++++|
T Consensus 107 ~~~~~~~~~~~~~i~~A~~lG~~~v~~~~--~~~~~~~~~~~~~~~~l~~l~~~a~~~G 163 (305)
T 3obe_A 107 ENMPKFDEFWKKATDIHAELGVSCMVQPS--LPRIENEDDAKVVSEIFNRAGEITKKAG 163 (305)
T ss_dssp GGHHHHHHHHHHHHHHHHHHTCSEEEECC--CCCCSSHHHHHHHHHHHHHHHHHHHTTT
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCEEEeCC--CCCCCCHHHHHHHHHHHHHHHHHHHHcC
Confidence 445777888888888875 666777654 333344444 444445555554
No 294
>3ih1_A Methylisocitrate lyase; alpha-beta structure, TIM-barrel, center for structural GENO infectious diseases, csgid; 2.00A {Bacillus anthracis str} PDB: 3kz2_A
Probab=42.78 E-value=89 Score=28.63 Aligned_cols=67 Identities=18% Similarity=0.147 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-c-CCcc-h-HHHHHhcC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-S-GSGG-L-LERLALTG 300 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-c-G~~~-~-l~~l~e~g 300 (386)
.+-.++-++++.++|||.|++. .. -+++.+++ +.+.+ .+|++.-. - |... + .+.|.++|
T Consensus 174 ~~~ai~Ra~ay~eAGAD~i~~e-~~---~~~~~~~~--------i~~~~-----~~P~~~n~~~~g~tp~~~~~eL~~lG 236 (305)
T 3ih1_A 174 LDEAIERANAYVKAGADAIFPE-AL---QSEEEFRL--------FNSKV-----NAPLLANMTEFGKTPYYSAEEFANMG 236 (305)
T ss_dssp HHHHHHHHHHHHHHTCSEEEET-TC---CSHHHHHH--------HHHHS-----CSCBEEECCTTSSSCCCCHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEc-CC---CCHHHHHH--------HHHHc-----CCCEEEeecCCCCCCCCCHHHHHHcC
Confidence 3455667788999999999862 22 24555444 44444 24765443 2 3333 3 79999999
Q ss_pred CCEEEcCC
Q 016596 301 VDVVSLDW 308 (386)
Q Consensus 301 ~d~l~~d~ 308 (386)
+..+++..
T Consensus 237 v~~v~~~~ 244 (305)
T 3ih1_A 237 FQMVIYPV 244 (305)
T ss_dssp CSEEEECS
T ss_pred CCEEEEch
Confidence 99998764
No 295
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=42.20 E-value=2.1e+02 Score=26.49 Aligned_cols=85 Identities=14% Similarity=0.129 Sum_probs=47.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEecCCc----CCCCHHH----------HHHhhHHHHHHHHHHHHhhCCCCcEEEEe
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFDSWA----TELSPVD----------FEEFSLPYLKQIVDTVKQTHPDLSLILYA 286 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~----------f~ef~~P~~k~l~~~i~~~~~~~~~~~H~ 286 (386)
++.+.+...+.++...++|-|+|-|.-.-+ .|+||.. ++. =.-+..++++++++.-+.-++.+-+
T Consensus 147 I~~ii~~F~~AA~rA~~AGFDgVEIH~ahGYLl~QFLSp~tN~RtDeYGGS~eN-R~Rf~~Eii~avr~~vg~~~v~vRl 225 (358)
T 4a3u_A 147 IPRLLDDYEKAARHALKAGFDGVQIHAANGYLIDEFIRDSTNHRHDEYGGAVEN-RIRLLKDVTERVIATIGKERTAVRL 225 (358)
T ss_dssp HHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHSTTTCCCCSTTSSSHHH-HTHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHHHHHHHHHcCCCeEeecccCCCcHHhceecccCCeeCCCCCCHHH-HHHHHHHHHHHHHHHcCccceEEEe
Confidence 444555566667778899999999865433 2555532 121 1235566677666543223455554
Q ss_pred cCC------cc---------hHHHHHhcCCCEEEc
Q 016596 287 SGS------GG---------LLERLALTGVDVVSL 306 (386)
Q Consensus 287 cG~------~~---------~l~~l~e~g~d~l~~ 306 (386)
... .. ....+.+.+++.+++
T Consensus 226 s~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~ 260 (358)
T 4a3u_A 226 SPNGEIQGTVDSHPEQVFIPAAKMLSDLDIAFLGM 260 (358)
T ss_dssp CCSSCBTTBCCSSTHHHHHHHHHHHHHHTCSEEEE
T ss_pred ccCcccCCCcccchHHHHHHHHHhhhccCcccccc
Confidence 321 10 123455678888875
No 296
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=41.97 E-value=94 Score=28.51 Aligned_cols=65 Identities=14% Similarity=0.129 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCC-CcEEE--EecCCcc-h-HHHHHhc
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPD-LSLIL--YASGSGG-L-LERLALT 299 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~-~~~~~--H~cG~~~-~-l~~l~e~ 299 (386)
.+-.++-++++.++|||.|| .-+.-|++.++++..-. . +|+.+ -.-|... + .+.|.++
T Consensus 177 ldeAi~Ra~ay~eAGAD~if----i~~~~~~~~~~~i~~~~-------------~~~Pv~~n~~~~g~~p~~t~~eL~~l 239 (307)
T 3lye_A 177 YEECIERLRAARDEGADVGL----LEGFRSKEQAAAAVAAL-------------APWPLLLNSVENGHSPLITVEEAKAM 239 (307)
T ss_dssp HHHHHHHHHHHHHTTCSEEE----ECCCSCHHHHHHHHHHH-------------TTSCBEEEEETTSSSCCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCCEEE----ecCCCCHHHHHHHHHHc-------------cCCceeEEeecCCCCCCCCHHHHHHc
Q ss_pred CCCEEEc
Q 016596 300 GVDVVSL 306 (386)
Q Consensus 300 g~d~l~~ 306 (386)
|+..+.+
T Consensus 240 Gv~~v~~ 246 (307)
T 3lye_A 240 GFRIMIF 246 (307)
T ss_dssp TCSEEEE
T ss_pred CCeEEEE
No 297
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=41.88 E-value=1.2e+02 Score=27.30 Aligned_cols=65 Identities=22% Similarity=0.237 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCCCEE
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGVDVV 304 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~d~l 304 (386)
+-.++-++++.++|||.|++ +. .-+++..++| .+.+ .+|+. -.|+... -.+.|.++|+..+
T Consensus 168 ~~ai~Ra~ay~eAGAd~i~~-e~---~~~~~~~~~i--------~~~~-----~~P~n-~~~~~~~~~~~eL~~lGv~~v 229 (275)
T 2ze3_A 168 AETVRRGQAYADAGADGIFV-PL---ALQSQDIRAL--------ADAL-----RVPLN-VMAFPGSPVPRALLDAGAARV 229 (275)
T ss_dssp HHHHHHHHHHHHTTCSEEEC-TT---CCCHHHHHHH--------HHHC-----SSCEE-EECCTTSCCHHHHHHTTCSEE
T ss_pred HHHHHHHHHHHHCCCCEEEE-CC---CCCHHHHHHH--------HHhc-----CCCEE-EecCCCCCCHHHHHHcCCcEE
Confidence 44566677889999999985 22 3445665543 4444 24654 3465433 3799999999998
Q ss_pred EcCC
Q 016596 305 SLDW 308 (386)
Q Consensus 305 ~~d~ 308 (386)
++..
T Consensus 230 ~~~~ 233 (275)
T 2ze3_A 230 SFGQ 233 (275)
T ss_dssp ECTT
T ss_pred EECh
Confidence 8764
No 298
>1yix_A Deoxyribonuclease YCFH; TIM barrel, zinc ION, NEW YORK SGX center for structural genomics, nysgxrc; 1.90A {Escherichia coli} SCOP: c.1.9.12
Probab=41.78 E-value=1.7e+02 Score=25.16 Aligned_cols=95 Identities=11% Similarity=0.055 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcC---CCEE-EcCCCCCHHHHHHHhCCCeeEEecCCcCccCC
Q 016596 262 SLPYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTG---VDVV-SLDWTVDMAEGRRRLGPDVAVQGNVDPGALFG 336 (386)
Q Consensus 262 ~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g---~d~l-~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~g 336 (386)
-.|.+.++++.+.+. +.|+++|+-.... .++.+.+.+ ..++ +.. ..+...+++.+...+-+ .++......
T Consensus 109 q~~~~~~~~~~a~~~--~~pv~iH~~~~~~~~~~~l~~~~~p~~~~v~H~~-~~~~~~~~~~~~~g~~~--~~sg~~~~~ 183 (265)
T 1yix_A 109 QQESFIHHIQIGREL--NKPVIVHTRDARADTLAILREEKVTDCGGVLHCF-TEDRETAGKLLDLGFYI--SFSGIVTFR 183 (265)
T ss_dssp HHHHHHHHHHHHHHH--TCCEEEEEESCHHHHHHHHHHTTGGGTCEEETTC-CSCHHHHHHHHTTTCEE--EECGGGGST
T ss_pred HHHHHHHHHHHHHHh--CCCEEEEecCchHHHHHHHHhcCCCCCCEEEEcC-CCCHHHHHHHHHCCcEE--EECCccccC
Confidence 346677778888887 6899999865544 467777653 2443 332 24677777766543322 122211122
Q ss_pred CHHHHHHHHHHHHHHcCCCCeEEecCCCC
Q 016596 337 SKDFITNRINDTVRKAGRWKHILNLGHGI 365 (386)
Q Consensus 337 t~eev~~~v~~~i~~~~~~g~Ils~gc~i 365 (386)
..+ .++++++..+..+++++++...
T Consensus 184 ~~~----~~~~~~~~~~~drll~~TD~P~ 208 (265)
T 1yix_A 184 NAE----QLRDAARYVPLDRLLVETDSPY 208 (265)
T ss_dssp TCH----HHHHHHHHSCGGGEEECCCBTS
T ss_pred chH----HHHHHHHhCChHHEEEecCCCC
Confidence 223 3456777766568899988753
No 299
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=41.46 E-value=1.2e+02 Score=27.24 Aligned_cols=86 Identities=13% Similarity=0.100 Sum_probs=45.8
Q ss_pred hHHHHHhcCCCEEEcCC-------CCCHHHHHHHhCCC-eeE-EecCCcC--c-----------c-CCCHHHHHHHHHHH
Q 016596 292 LLERLALTGVDVVSLDW-------TVDMAEGRRRLGPD-VAV-QGNVDPG--A-----------L-FGSKDFITNRINDT 348 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d~-------~~dl~e~~~~~g~~-~~l-~G~vd~~--~-----------l-~gt~eev~~~v~~~ 348 (386)
.++.++++|++.+.+-. ..+++++++.+.+. +.+ ..+.+.. . + ....++..+.+++.
T Consensus 34 ~l~~~a~~G~~~VEl~~~~~~~~~~~~~~~~~~~l~~~GL~v~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 113 (303)
T 3l23_A 34 NLRKVKDMGYSKLELAGYGKGAIGGVPMMDFKKMAEDAGLKIISSHVNPVDTSISDPFKAMIFKYSKEVTPKIMEYWKAT 113 (303)
T ss_dssp HHHHHHHTTCCEEEECCEETTEETTEEHHHHHHHHHHTTCEEEEEECCCBCTTCSSTTTTBCCSCCTTTHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEeccccCcccCCCCHHHHHHHHHHcCCeEEEEecccccccccCcccccccccchhhHHHHHHHHHHH
Confidence 35677778888775422 23566665554321 222 1222211 1 1 12347788889999
Q ss_pred HHHcC--CCCeEEecCCCCCCCCcHHHHHHHHH
Q 016596 349 VRKAG--RWKHILNLGHGIKVGTPEENVAHFFE 379 (386)
Q Consensus 349 i~~~~--~~g~Ils~gc~i~~~tp~Eni~a~~~ 379 (386)
++.+. |..+|..++ .+.....+..+.+++
T Consensus 114 i~~A~~lG~~~v~~~~--~~~~~~~~~~~~~~~ 144 (303)
T 3l23_A 114 AADHAKLGCKYLIQPM--MPTITTHDEAKLVCD 144 (303)
T ss_dssp HHHHHHTTCSEEEECS--CCCCCSHHHHHHHHH
T ss_pred HHHHHHcCCCEEEECC--CCCCCCHHHHHHHHH
Confidence 98876 666776654 343344544444433
No 300
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=41.12 E-value=1.2e+02 Score=27.56 Aligned_cols=67 Identities=13% Similarity=0.153 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-c-CCcc-h-HHHHHhcC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-S-GSGG-L-LERLALTG 300 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-c-G~~~-~-l~~l~e~g 300 (386)
.+-.++-++++.++|||.|++. . .-+++.. +++.+.+ .+|++.-. . |... . .+.|.++|
T Consensus 166 l~~ai~ra~ay~eAGAd~i~~e-~---~~~~~~~--------~~i~~~~-----~iP~~~N~~~~g~~p~~~~~eL~~~G 228 (295)
T 1xg4_A 166 LDAAIERAQAYVEAGAEMLFPE-A---ITELAMY--------RQFADAV-----QVPILANITEFGATPLFTTDELRSAH 228 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEET-T---CCSHHHH--------HHHHHHH-----CSCBEEECCSSSSSCCCCHHHHHHTT
T ss_pred HHHHHHHHHHHHHcCCCEEEEe-C---CCCHHHH--------HHHHHHc-----CCCEEEEecccCCCCCCCHHHHHHcC
Confidence 3556677888999999999863 2 2234443 4455555 25765432 2 3333 3 79999999
Q ss_pred CCEEEcCC
Q 016596 301 VDVVSLDW 308 (386)
Q Consensus 301 ~d~l~~d~ 308 (386)
++.+++..
T Consensus 229 ~~~v~~~~ 236 (295)
T 1xg4_A 229 VAMALYPL 236 (295)
T ss_dssp CSEEEESS
T ss_pred CCEEEECh
Confidence 99998764
No 301
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=41.06 E-value=63 Score=28.16 Aligned_cols=82 Identities=21% Similarity=0.279 Sum_probs=49.2
Q ss_pred HHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHHHhcCCCEE
Q 016596 229 AKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERLALTGVDVV 304 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l~e~g~d~l 304 (386)
.++++.+.++|++.|.+.|-.+. .-.+ +..+++..+++.. ++|++. .|... .++.+.+.|+|.+
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~~~~~---------~~~~~i~~i~~~~-~ipvi~--~Ggi~~~~~~~~~l~~Gad~V 105 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDGTKSG---------YDTEMIRFVRPLT-TLPIIA--SGGAGKMEHFLEAFLRGADKV 105 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTCSSC---------CCHHHHHHHGGGC-CSCEEE--ESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHHcCCCEEEEEecCcccCCCc---------ccHHHHHHHHHhC-CCCEEE--eCCCCCHHHHHHHHHcCCCee
Confidence 35667778899999998874332 1111 1223444555443 567433 44443 3677788999998
Q ss_pred EcCCC----CC-HHHHHHHhCCC
Q 016596 305 SLDWT----VD-MAEGRRRLGPD 322 (386)
Q Consensus 305 ~~d~~----~d-l~e~~~~~g~~ 322 (386)
.+... .+ +.++.+.+|..
T Consensus 106 ~ig~~~l~dp~~~~~~~~~~g~~ 128 (247)
T 3tdn_A 106 SINTAAVENPSLITQIAQTFGSQ 128 (247)
T ss_dssp CCSHHHHHCTHHHHHHHHHHC--
T ss_pred ehhhHHhhChHHHHHHHHHhCCC
Confidence 87542 23 67888889854
No 302
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=40.98 E-value=56 Score=29.69 Aligned_cols=66 Identities=20% Similarity=0.237 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-h-HHHHHhcCCCE
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-L-LERLALTGVDV 303 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~-l~~l~e~g~d~ 303 (386)
+-.++-++++.++|||.|++. . .-+++..+++ .+.+ .+|+++-.-|... . .+.|.++|+..
T Consensus 168 ~~ai~Ra~ay~eAGAd~i~~e-~---~~~~~~~~~i--------~~~~-----~~P~ii~~~g~~~~~~~~eL~~lGv~~ 230 (287)
T 3b8i_A 168 DAVIQRTLAYQEAGADGICLV-G---VRDFAHLEAI--------AEHL-----HIPLMLVTYGNPQLRDDARLARLGVRV 230 (287)
T ss_dssp HHHHHHHHHHHHTTCSEEEEE-C---CCSHHHHHHH--------HTTC-----CSCEEEECTTCGGGCCHHHHHHTTEEE
T ss_pred HHHHHHHHHHHHcCCCEEEec-C---CCCHHHHHHH--------HHhC-----CCCEEEeCCCCCCCCCHHHHHHcCCcE
Confidence 446667788999999999863 1 2345555443 3333 3587732224444 3 79999999998
Q ss_pred EEcCC
Q 016596 304 VSLDW 308 (386)
Q Consensus 304 l~~d~ 308 (386)
+++..
T Consensus 231 v~~~~ 235 (287)
T 3b8i_A 231 VVNGH 235 (287)
T ss_dssp EECCC
T ss_pred EEECh
Confidence 88764
No 303
>2vg3_A Undecaprenyl pyrophosphate synthetase; transferase, cell WALL biogenesis/degradation, cell cycle, P transferase; HET: GPP; 1.8A {Mycobacterium tuberculosis} PDB: 2vg2_A* 2vg4_A
Probab=40.92 E-value=1.9e+02 Score=26.14 Aligned_cols=64 Identities=14% Similarity=0.073 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhCCCEEEEec-CCcCCCCH-H---HHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchH
Q 016596 226 TSMAKYVQYQADNGAQAVQIFD-SWATELSP-V---DFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLL 293 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d-~~~~~iSp-~---~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l 293 (386)
+.+.+.++...+.|+..+.+.. +..++=.| + ..-+++..++++.++.+++. + +-++..|+...+
T Consensus 86 ~~l~~iv~~c~~lGI~~LTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~--~--vrvrviG~~~~l 154 (284)
T 2vg3_A 86 AVVIDIACGAIELGIKWLSLYAFSTENWKRSPEEVRFLMGFNRDVVRRRRDTLKKL--G--VRIRWVGSRPRL 154 (284)
T ss_dssp HHHHHHHHHHHHHTCCEEEEEEEETTGGGSCHHHHHHHHHHHHHHHHHHHHHHHHT--T--EEEEEESCCTTS
T ss_pred HHHHHHHHHHHHcCCCEEEEEeccCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHc--C--eEEEEeCChhhC
Confidence 3344455556778999987765 33222222 2 22345666677767777775 3 578888987643
No 304
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=40.63 E-value=2.2e+02 Score=26.24 Aligned_cols=127 Identities=10% Similarity=0.037 Sum_probs=71.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-chHH
Q 016596 216 VLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-GLLE 294 (386)
Q Consensus 216 ~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~~l~ 294 (386)
.+..+++..+..+..+++...+.+++.+.|+.-..+. . -...+++++++.+++..++ |+.++..... ....
T Consensus 142 ~w~~~f~~y~~~i~~~a~~a~~~~V~~~~IGNE~~~~-~------~~~~~~~~Li~~vR~~~~g-~VTya~~~~~~~~~~ 213 (343)
T 3civ_A 142 SWEAWFGSYSDMMAHYAHVAKRTGCEMFCVGCEMTTA-E------PHEAMWRETIARVRTEYDG-LVTYNCNHGREEHVR 213 (343)
T ss_dssp BHHHHHHHHHHHHHHHHHHHHHTTCSEEEEEESCTTT-T------TCHHHHHHHHHHHHHHCCS-EEEEEEETTCTTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHccCCCceEEEECCCCCCC-C------chHHHHHHHHHHHHhhCCC-CEEEEecCccccccc
Confidence 3445566667766666655556688888887533221 1 1244667778888888655 7777654331 1112
Q ss_pred HHHhcCCCEEEcCCCCC----------HHHHHHHhCCCeeE--EecCCcC-cc-----------CCCHHHHHHHHHHHHH
Q 016596 295 RLALTGVDVVSLDWTVD----------MAEGRRRLGPDVAV--QGNVDPG-AL-----------FGSKDFITNRINDTVR 350 (386)
Q Consensus 295 ~l~e~g~d~l~~d~~~d----------l~e~~~~~g~~~~l--~G~vd~~-~l-----------~gt~eev~~~v~~~i~ 350 (386)
+. -.+|+|+++.... +..+.+++++.+.+ .| .+.. .. ..|.+.=.+..+..++
T Consensus 214 -lw-~~~DvIgin~Y~~~~~w~~~~~~l~~~~~~~~KPIiitE~G-~~s~~g~~~~p~~~~~~~~~se~~Qa~~l~~~~~ 290 (343)
T 3civ_A 214 -FW-DAVDLISSSAYYPIDRWRDRVPVLREVAEAHEKPLFFMEVG-CPSRSGSGACPWDYRHPGAVCLDEQARFYEAMFA 290 (343)
T ss_dssp -CG-GGSSEEEEECCCCGGGHHHHHHHHHHHHHHHTCCEEEEEEC-CCSBTTGGGSTTCTTCCCCBCHHHHHHHHHHHHH
T ss_pred -cc-ccCCEEEEeccCCchhHHHHHHHHHHHHHHhCCCEEEEeeC-CCCCCCCCCCCCcccCCCCCCHHHHHHHHHHHHH
Confidence 11 2478888875432 44555667776665 23 2221 11 1345555666667777
Q ss_pred HcC
Q 016596 351 KAG 353 (386)
Q Consensus 351 ~~~ 353 (386)
.+.
T Consensus 291 ~~~ 293 (343)
T 3civ_A 291 AMP 293 (343)
T ss_dssp HSC
T ss_pred HHh
Confidence 765
No 305
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=40.57 E-value=1.9e+02 Score=26.76 Aligned_cols=66 Identities=14% Similarity=0.253 Sum_probs=39.9
Q ss_pred HHHHHHHh--CCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcC
Q 016596 231 YVQYQADN--GAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLD 307 (386)
Q Consensus 231 ~~~~~~e~--G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d 307 (386)
.++.+++. |++++.+.-..+ .+ +...+.++.+++.+++.|+++..+-+......+.+.|+|++.+.
T Consensus 122 ~~~~l~~~~~g~~~i~i~~~~g---~~--------~~~~~~i~~lr~~~~~~~vi~g~v~t~e~A~~a~~aGaD~I~v~ 189 (351)
T 2c6q_A 122 QLEQILEAIPQVKYICLDVANG---YS--------EHFVEFVKDVRKRFPQHTIMAGNVVTGEMVEELILSGADIIKVG 189 (351)
T ss_dssp HHHHHHHHCTTCCEEEEECSCT---TB--------HHHHHHHHHHHHHCTTSEEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHhccCCCCEEEEEecCC---Cc--------HHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHhCCCEEEEC
Confidence 44555666 999877532222 11 22345566676665456777665544334577789999998553
No 306
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=40.13 E-value=73 Score=29.44 Aligned_cols=61 Identities=26% Similarity=0.227 Sum_probs=40.6
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d 307 (386)
+-++..+++|+|+|.+ |. ++|+..++ .++.++. . +.+-..|+.+ .+..++++|+|++++.
T Consensus 242 dea~eAl~aGaD~I~L-Dn----~~~~~l~~--------av~~l~~---~--v~ieaSGGIt~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 242 AELEEAISAGADIIML-DN----FSLEMMRE--------AVKINAG---R--AALENSGNITLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHHHHHTTCSEEEE-ES----CCHHHHHH--------HHHHHTT---S--SEEEEESSCCHHHHHHHHTTTCSEEECT
T ss_pred HHHHHHHHcCCCEEEE-CC----CCHHHHHH--------HHHHhCC---C--CeEEEECCCCHHHHHHHHHcCCCEEEEC
Confidence 3444556789999886 44 46655444 4444432 2 3566778776 4899999999999885
Q ss_pred C
Q 016596 308 W 308 (386)
Q Consensus 308 ~ 308 (386)
.
T Consensus 304 a 304 (320)
T 3paj_A 304 A 304 (320)
T ss_dssp H
T ss_pred c
Confidence 3
No 307
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=40.00 E-value=83 Score=29.50 Aligned_cols=83 Identities=19% Similarity=0.186 Sum_probs=50.7
Q ss_pred HHHHHHhCCCEEEEecCC--c--------CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCC
Q 016596 232 VQYQADNGAQAVQIFDSW--A--------TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGV 301 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~~--~--------~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~ 301 (386)
++.+++.|++.+-+..+. . ..++++. ++++++.++++ |.++.+|+.|... +....+.|+
T Consensus 181 v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~--------l~~~~~~A~~~--g~~v~~H~~~~~~-i~~al~~G~ 249 (426)
T 2r8c_A 181 VREELQMGADQIKIMASGGVASPTDPVGVFGYSEDE--------IRAIVAEAQGR--GTYVLAHAYTPAA-IARAVRCGV 249 (426)
T ss_dssp HHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHH--------HHHHHHHHHHT--TCCEEEEECSHHH-HHHHHHTTC
T ss_pred HHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHH--------HHHHHHHHHHc--CCEEEEEeCChHH-HHHHHHcCC
Confidence 334556788877665321 1 1456555 56788888887 6899999986533 566677898
Q ss_pred CEEEcCCCCCHHHHHHHhCCCeeE
Q 016596 302 DVVSLDWTVDMAEGRRRLGPDVAV 325 (386)
Q Consensus 302 d~l~~d~~~dl~e~~~~~g~~~~l 325 (386)
+.+.--...+.+.++......+.+
T Consensus 250 ~~i~H~~~~~~~~~~~~~~~gv~~ 273 (426)
T 2r8c_A 250 RTIEHGNLIDDETARLVAEHGAYV 273 (426)
T ss_dssp SEEEECTTCCHHHHHHHHHTTCEE
T ss_pred CEEecCCcCCHHHHHHHHHcCCeE
Confidence 876333345555554443334444
No 308
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=39.72 E-value=59 Score=27.32 Aligned_cols=119 Identities=13% Similarity=0.111 Sum_probs=62.8
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC--
Q 016596 232 VQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT-- 309 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~-- 309 (386)
++...++|+|.+ +... ++ .++++.+++. |.+++. -+.+...+....+.|++++.+...
T Consensus 76 ~~~a~~~Gad~i-v~~~----~~------------~~~~~~~~~~--g~~vi~-g~~t~~e~~~a~~~Gad~vk~~~~~~ 135 (205)
T 1wa3_A 76 CRKAVESGAEFI-VSPH----LD------------EEISQFCKEK--GVFYMP-GVMTPTELVKAMKLGHTILKLFPGEV 135 (205)
T ss_dssp HHHHHHHTCSEE-ECSS----CC------------HHHHHHHHHH--TCEEEC-EECSHHHHHHHHHTTCCEEEETTHHH
T ss_pred HHHHHHcCCCEE-EcCC----CC------------HHHHHHHHHc--CCcEEC-CcCCHHHHHHHHHcCCCEEEEcCccc
Confidence 344567899998 4322 22 2456666776 567543 222222456667899999976542
Q ss_pred CCHH---HHHHHhC-CCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCC--CcHHHHHHHHHHHHh
Q 016596 310 VDMA---EGRRRLG-PDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVG--TPEENVAHFFEVAKA 383 (386)
Q Consensus 310 ~dl~---e~~~~~g-~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~--tp~Eni~a~~~a~~~ 383 (386)
..+. ++++.++ -.+...|||++ + .+.++++.+. .++++++.- +..+ .|.+..+++.+.+++
T Consensus 136 ~g~~~~~~l~~~~~~~pvia~GGI~~-------~----~~~~~~~~Ga-~~v~vGs~i-~~~d~~~~~~~~~~~~~~~~~ 202 (205)
T 1wa3_A 136 VGPQFVKAMKGPFPNVKFVPTGGVNL-------D----NVCEWFKAGV-LAVGVGSAL-VKGTPDEVREKAKAFVEKIRG 202 (205)
T ss_dssp HHHHHHHHHHTTCTTCEEEEBSSCCT-------T----THHHHHHHTC-SCEEECHHH-HCSCHHHHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHhCCCCcEEEcCCCCH-------H----HHHHHHHCCC-CEEEECccc-cCCCHHHHHHHHHHHHHHHHh
Confidence 2333 3334342 22555788854 2 2244444432 345554321 0112 156777777776664
No 309
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=39.26 E-value=58 Score=30.44 Aligned_cols=67 Identities=30% Similarity=0.362 Sum_probs=45.1
Q ss_pred HHhCCCEEEEecCCcC---------CCCHHHHHHhhHHH-HHHHHHHHHhhCCCCcEEEEecCC-----------c---c
Q 016596 236 ADNGAQAVQIFDSWAT---------ELSPVDFEEFSLPY-LKQIVDTVKQTHPDLSLILYASGS-----------G---G 291 (386)
Q Consensus 236 ~e~G~d~i~i~d~~~~---------~iSp~~f~ef~~P~-~k~l~~~i~~~~~~~~~~~H~cG~-----------~---~ 291 (386)
.++|.+.+.|-|.|.. ..+|+. +|. +|.+++.+|++ |....+|..-. . .
T Consensus 41 ~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~-----FP~Gl~~l~~~ih~~--Glk~Giw~~~~~~~~~~~~pg~~~~~~ 113 (362)
T 1uas_A 41 AKLGYQYVNIDDCWAEYSRDSQGNFVPNRQT-----FPSGIKALADYVHAK--GLKLGIYSDAGSQTCSNKMPGSLDHEE 113 (362)
T ss_dssp HHHTCCEEECCSSCBCSSCCTTSCCCBCTTT-----CTTCHHHHHHHHHHT--TCEEEEEEESSSBCTTSSSBCCTTCHH
T ss_pred hhcCCcEEEECCCcCCCCCCCCCCeeEChhc-----cCccHHHHHHHHHHC--CCEeEEEeeCCCccccCCCCCchhHHH
Confidence 6789999887555532 223322 255 89999999998 56777766421 1 1
Q ss_pred -hHHHHHhcCCCEEEcCCC
Q 016596 292 -LLERLALTGVDVVSLDWT 309 (386)
Q Consensus 292 -~l~~l~e~g~d~l~~d~~ 309 (386)
....+.+.|+|.+-+|..
T Consensus 114 ~~~~~~~~wGvdyvK~D~~ 132 (362)
T 1uas_A 114 QDVKTFASWGVDYLKYDNC 132 (362)
T ss_dssp HHHHHHHHHTCCEEEEECC
T ss_pred HHHHHHHHcCCCEEEECcc
Confidence 246778899999987764
No 310
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=39.16 E-value=2.2e+02 Score=25.80 Aligned_cols=57 Identities=18% Similarity=0.221 Sum_probs=35.6
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.++.+.+.|+++|.+.-.. | .++++.+++. +.+++ +.+.+........+.|+|.+.+
T Consensus 88 ~~~~~~~~g~d~V~~~~g~-----p-----------~~~~~~l~~~--gi~vi-~~v~t~~~a~~~~~~GaD~i~v 144 (328)
T 2gjl_A 88 YRAAIIEAGIRVVETAGND-----P-----------GEHIAEFRRH--GVKVI-HKCTAVRHALKAERLGVDAVSI 144 (328)
T ss_dssp HHHHHHHTTCCEEEEEESC-----C-----------HHHHHHHHHT--TCEEE-EEESSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhcCCCEEEEcCCC-----c-----------HHHHHHHHHc--CCCEE-eeCCCHHHHHHHHHcCCCEEEE
Confidence 4556678899998875321 2 2445666765 46655 5555443445667789998866
No 311
>1luc_B Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_B 1bsl_A 1xkj_A 3fgc_B*
Probab=39.03 E-value=13 Score=34.24 Aligned_cols=28 Identities=11% Similarity=0.160 Sum_probs=23.2
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCeEEec
Q 016596 334 LFGSKDFITNRINDTVRKAGRWKHILNL 361 (386)
Q Consensus 334 l~gt~eev~~~v~~~i~~~~~~g~Ils~ 361 (386)
+.||||+|.+.+++..+..|-.+|++.+
T Consensus 272 ~vGtpe~v~~~l~~~~~~~G~d~~~l~~ 299 (324)
T 1luc_B 272 AIGTYEESTQAARVAIECCGAADLLMSF 299 (324)
T ss_dssp EEESHHHHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCcCHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 3699999999999888888745888864
No 312
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=38.95 E-value=1e+02 Score=29.47 Aligned_cols=66 Identities=12% Similarity=0.213 Sum_probs=43.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEc
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSL 306 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~ 306 (386)
.+.++.++++|+|+|.+ |...+ .|+ ...++++.+++.. +.+++...+........+.+.|+|++.+
T Consensus 146 ~e~~~~lveaGvdvIvl-dta~G--~~~--------~~~e~I~~ik~~~-~i~Vi~g~V~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVL-DSAHG--HSL--------NIIRTLKEIKSKM-NIDVIVGNVVTEEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEE-CCSCC--SBH--------HHHHHHHHHHTTC-CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE-eCCCC--Ccc--------cHHHHHHHHHhcC-CCeEEEeecCCHHHHHHHHHcCCCEEEE
Confidence 46788889999998865 32222 222 2344556666654 5677776665544567788999998866
No 313
>3nur_A Amidohydrolase; TIM barrel; 1.75A {Staphylococcus aureus}
Probab=38.74 E-value=63 Score=30.17 Aligned_cols=69 Identities=6% Similarity=-0.011 Sum_probs=45.5
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
+.++.+..+++..-.+.||+. .+++..+++++++++.|=.|+-+.+.-+ ......+.+..+++++.++|
T Consensus 118 l~~~~~~~P~Rf~g~a~v~~~----~~~~a~~El~r~~~~~G~~Gv~l~~~~~-~~~~~d~~~~p~~~~~~e~g 186 (357)
T 3nur_A 118 LANYIAQYPNRFVGFATLPIN----EPEAAAREFERCINDLGFKGALIMGRAQ-DGFLDQDKYDIIFKTAENLD 186 (357)
T ss_dssp HHHHHHHSTTTEEECBCCCTT----SHHHHHHHHHHHHHTTCCCCEEEESCBT-TBCTTSGGGHHHHHHHHHHT
T ss_pred HHHHHHhCCCEEEEEEeCCCC----CHHHHHHHHHHHHhhcCceEEEeCCCCC-CCCCCCccHHHHHHHHHhcC
Confidence 456677788887777778763 4677888899998877734666654211 11123345778888888775
No 314
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=38.61 E-value=1.2e+02 Score=26.29 Aligned_cols=58 Identities=14% Similarity=0.244 Sum_probs=37.2
Q ss_pred HHHHHhcCCCEEEcCCC-----CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecC
Q 016596 293 LERLALTGVDVVSLDWT-----VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLG 362 (386)
Q Consensus 293 l~~l~e~g~d~l~~d~~-----~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~g 362 (386)
.+.+.+-|+.++.+... ..++.+++.+++-++-.|.|- |+++ ++++++.+ -.||++|+
T Consensus 31 a~al~~gGi~~iEvt~~t~~a~~~I~~l~~~~p~~~IGAGTVl------t~~~----a~~ai~AG--A~fivsP~ 93 (217)
T 3lab_A 31 AKALVAGGVHLLEVTLRTEAGLAAISAIKKAVPEAIVGAGTVC------TADD----FQKAIDAG--AQFIVSPG 93 (217)
T ss_dssp HHHHHHTTCCEEEEETTSTTHHHHHHHHHHHCTTSEEEEECCC------SHHH----HHHHHHHT--CSEEEESS
T ss_pred HHHHHHcCCCEEEEeCCCccHHHHHHHHHHHCCCCeEeecccc------CHHH----HHHHHHcC--CCEEEeCC
Confidence 47778889999977533 257888888976333244331 4554 45555554 48999876
No 315
>3qas_B Undecaprenyl pyrophosphate synthase; alpha-helix, isoprenoid biosynthesis, transferase; 1.70A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 1x09_A* 1x08_A*
Probab=38.50 E-value=1.5e+02 Score=26.31 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEec-CCcCCCCHH----HHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchH-HHHHhc
Q 016596 226 TSMAKYVQYQADNGAQAVQIFD-SWATELSPV----DFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLL-ERLALT 299 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d-~~~~~iSp~----~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l-~~l~e~ 299 (386)
+.+.+.++...+.|+..+.+.. +.-++=.|+ ..-+.+..++++.++.+++. + +-++..|+...+ +.+.+
T Consensus 48 ~~l~~iv~~c~~~GI~~lTlYaFStENwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~--~--vrlr~iG~~~~lp~~~~~- 122 (253)
T 3qas_B 48 KSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH--N--VRLRIIGDTSRFNSRLQE- 122 (253)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCCC-----------------CTHHHHHHHHHHHT--T--CEEEEESCCTTSCHHHHH-
T ss_pred HHHHHHHHHHHHCCCCEEEEEEecCcccCCCHHHHHHHHHHHHHHHHHHHHHHHHC--C--eEEEEeCChHhCCHHHHH-
Confidence 4444555567788999988765 222221221 11234455666666667765 3 467888987643 33332
Q ss_pred CCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcC-cc-CCCHHHHHHHHHHHHHHc
Q 016596 300 GVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPG-AL-FGSKDFITNRINDTVRKA 352 (386)
Q Consensus 300 g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~-~l-~gt~eev~~~v~~~i~~~ 352 (386)
.+.++.+...++ .++.-. .+ +|+.+||.+.++++.+..
T Consensus 123 -----------~i~~a~~~T~~n----~~l~lnia~~YgGR~EIv~A~r~l~~~v 162 (253)
T 3qas_B 123 -----------RIRKSEALTAGN----TGLTLNIAANYGGRWDIVQGVRQLAEKV 162 (253)
T ss_dssp -----------HHHHHHHHHTTC----CSCEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHHHhcCC----CceEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 122233322211 111111 12 577777777777776643
No 316
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=38.30 E-value=1.5e+02 Score=25.41 Aligned_cols=82 Identities=16% Similarity=0.085 Sum_probs=51.0
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecCCcCCC---CHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 016596 213 QPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDSWATEL---SPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS 289 (386)
Q Consensus 213 ~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~~~~~i---Sp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~ 289 (386)
+|+...+.+ +.+.+.++...+.|+..+.+.-...... +++...+.+...++++.+.+++. |+.+.+|.++.
T Consensus 67 ~~~~r~~~~----~~~~~~i~~A~~lGa~~v~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lEn~~~ 140 (254)
T 3ayv_A 67 DPEVRGLTL----RRLLFGLDRAAELGADRAVFHSGIPHGRTPEEALERALPLAEALGLVVRRARTL--GVRLLLENSHE 140 (254)
T ss_dssp SHHHHHHHH----HHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHHTHHHHHHHTHHHHHHHHHH--TCEEEEECSSC
T ss_pred CHHHHHHHH----HHHHHHHHHHHHhCCCEEEECCCCCcccccccHHHHHHHHHHHHHHHHHHHhhc--CCEEEEcCCCC
Confidence 455444433 4455566667788999887654332222 23444566777889999999887 67888998764
Q ss_pred cc---hHHHHHhcC
Q 016596 290 GG---LLERLALTG 300 (386)
Q Consensus 290 ~~---~l~~l~e~g 300 (386)
.+ ....+.+++
T Consensus 141 ~~~~~~~~l~~~v~ 154 (254)
T 3ayv_A 141 PHPEALRPVLEAHA 154 (254)
T ss_dssp SSGGGTHHHHHHHT
T ss_pred CCHHHHHHHHHhcC
Confidence 32 234445555
No 317
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=38.06 E-value=2.2e+02 Score=25.38 Aligned_cols=121 Identities=16% Similarity=0.186 Sum_probs=64.5
Q ss_pred HHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC-----
Q 016596 234 YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW----- 308 (386)
Q Consensus 234 ~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~----- 308 (386)
...++|||+|.+.... ++++. ++++++.+++. |..+++ .+.+..-++...+.|++.+.+.+
T Consensus 130 ~A~~~GAD~VlLi~a~---l~~~~--------l~~l~~~a~~l--Gl~~lv-ev~t~ee~~~A~~~Gad~IGv~~r~l~~ 195 (272)
T 3qja_A 130 EARAHGADMLLLIVAA---LEQSV--------LVSMLDRTESL--GMTALV-EVHTEQEADRALKAGAKVIGVNARDLMT 195 (272)
T ss_dssp HHHHTTCSEEEEEGGG---SCHHH--------HHHHHHHHHHT--TCEEEE-EESSHHHHHHHHHHTCSEEEEESBCTTT
T ss_pred HHHHcCCCEEEEeccc---CCHHH--------HHHHHHHHHHC--CCcEEE-EcCCHHHHHHHHHCCCCEEEECCCcccc
Confidence 3446899999875543 45544 34456666665 444433 33333345666688999987643
Q ss_pred -CCCHHHHHH---HhCCC--eeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHH
Q 016596 309 -TVDMAEGRR---RLGPD--VAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEV 380 (386)
Q Consensus 309 -~~dl~e~~~---~~g~~--~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a 380 (386)
.+|+...++ .++.+ ++..|||. |+|+++ ++.+. |-.|++++..= +-..-|.+.++.++++
T Consensus 196 ~~~dl~~~~~l~~~v~~~~pvVaegGI~------t~edv~----~l~~~-GadgvlVGsal-~~a~dp~~~~~~l~~~ 261 (272)
T 3qja_A 196 LDVDRDCFARIAPGLPSSVIRIAESGVR------GTADLL----AYAGA-GADAVLVGEGL-VTSGDPRAAVADLVTA 261 (272)
T ss_dssp CCBCTTHHHHHGGGSCTTSEEEEESCCC------SHHHHH----HHHHT-TCSEEEECHHH-HTCSCHHHHHHHHHTT
T ss_pred cccCHHHHHHHHHhCcccCEEEEECCCC------CHHHHH----HHHHc-CCCEEEEcHHH-hCCCCHHHHHHHHHhh
Confidence 235544444 44322 33355663 566654 33333 43467775431 1122355556665544
No 318
>3kws_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 1.68A {Parabacteroides distasonis atcc 8503}
Probab=37.90 E-value=2e+02 Score=25.00 Aligned_cols=94 Identities=14% Similarity=0.054 Sum_probs=49.6
Q ss_pred hHHHHHhcCCCEEEcCCC---CCHHHHHHHhCCC-eeEEe-cCC-cCcc-CCCH---HHHHHHHHHHHHHcC--CC-CeE
Q 016596 292 LLERLALTGVDVVSLDWT---VDMAEGRRRLGPD-VAVQG-NVD-PGAL-FGSK---DFITNRINDTVRKAG--RW-KHI 358 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d~~---~dl~e~~~~~g~~-~~l~G-~vd-~~~l-~gt~---eev~~~v~~~i~~~~--~~-g~I 358 (386)
.++.+.++|++.+.+... .++.++++.+.+. +.+.+ +.+ +..+ ..++ ++..+..++.++.+. |. ..+
T Consensus 43 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~gl~v~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lGa~~v~ 122 (287)
T 3kws_A 43 KLDFMEKLGVVGFEPGGGGLAGRVNEIKQALNGRNIKVSAICAGFKGFILSTDPAIRKECMDTMKEIIAAAGELGSTGVI 122 (287)
T ss_dssp HHHHHHHTTCCEEECBSTTCGGGHHHHHHHHTTSSCEECEEECCCCSCTTBSSHHHHHHHHHHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEecCCchHHHHHHHHHHHHHcCCeEEEEecCCCCcCCCCCHHHHHHHHHHHHHHHHHHHHcCCCEEE
Confidence 367778899998876432 4677887776543 33321 111 1123 2344 334456667776654 43 455
Q ss_pred EecCCCCCC-C--Cc-------HHHHHHHHHHHHhhc
Q 016596 359 LNLGHGIKV-G--TP-------EENVAHFFEVAKAIR 385 (386)
Q Consensus 359 ls~gc~i~~-~--tp-------~Eni~a~~~a~~~yg 385 (386)
+.+|.+-.. . .. .++++.+.+.++++|
T Consensus 123 ~~~g~~~~~~~~p~~~~~~~~~~~~l~~l~~~a~~~G 159 (287)
T 3kws_A 123 IVPAFNGQVPALPHTMETRDFLCEQFNEMGTFAAQHG 159 (287)
T ss_dssp ECSCCTTCCSBCCSSHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EecCcCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHcC
Confidence 555543221 1 23 345555556666655
No 319
>3ayv_A Putative uncharacterized protein TTHB071; structural genomics, riken structural genomics/proteomics in RSGI, TIM barrel, unknown function; 1.85A {Thermus thermophilus} PDB: 3ayt_A
Probab=37.48 E-value=1.5e+02 Score=25.37 Aligned_cols=71 Identities=17% Similarity=0.125 Sum_probs=36.8
Q ss_pred hHHHHHhcCCCEEEcC--C-CC----CHHHHHHHhCCCeeEEecCCcCcc-CCCHH---HHHHHHHHHHHHcC--CC-Ce
Q 016596 292 LLERLALTGVDVVSLD--W-TV----DMAEGRRRLGPDVAVQGNVDPGAL-FGSKD---FITNRINDTVRKAG--RW-KH 357 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d--~-~~----dl~e~~~~~g~~~~l~G~vd~~~l-~gt~e---ev~~~v~~~i~~~~--~~-g~ 357 (386)
.++.+.++|++ +.+. . .. .+.++++.+++.+++.+..-...+ ..+++ +..+.+++.++.+. |. .+
T Consensus 15 ~l~~~~~~G~~-vEl~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~l~~~~~~~r~~~~~~~~~~i~~A~~lGa~~v 93 (254)
T 3ayv_A 15 ALPRLQALGLG-AEVYLDPALLEEDALFQSLRRRFSGKLSVHLPFWNLDLLSPDPEVRGLTLRRLLFGLDRAAELGADRA 93 (254)
T ss_dssp HHHHHHHHTCE-EEEECCGGGTTCHHHHHHHHHHCCSCEEEECCCTTCCTTCSSHHHHHHHHHHHHHHHHHHHHTTCSEE
T ss_pred HHHHHHhcCCC-EEEeccccccCcHHHHHHHHHHhCCCeEEecCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCEE
Confidence 36777778888 6541 1 11 456788888425665553221123 22332 33455666666654 43 44
Q ss_pred EEecCC
Q 016596 358 ILNLGH 363 (386)
Q Consensus 358 Ils~gc 363 (386)
++.+|.
T Consensus 94 ~~~~g~ 99 (254)
T 3ayv_A 94 VFHSGI 99 (254)
T ss_dssp EEECCC
T ss_pred EECCCC
Confidence 465654
No 320
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=37.44 E-value=1.2e+02 Score=27.05 Aligned_cols=89 Identities=10% Similarity=0.177 Sum_probs=54.0
Q ss_pred hHHHHHhcCCCEE-Ec--CC-----C--CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEec
Q 016596 292 LLERLALTGVDVV-SL--DW-----T--VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNL 361 (386)
Q Consensus 292 ~l~~l~e~g~d~l-~~--d~-----~--~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~ 361 (386)
.+..+.+.|++.. .+ +. . -.+.++.+.+++++.-+++|+|.. +++..+++++ ++..+=.|+-+.+
T Consensus 52 ~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~v~p~~----~~~a~~eL~~-~~~~g~~Gi~~~~ 126 (291)
T 3irs_A 52 MFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEAAT----RKEAMAQMQE-ILDLGIRIVNLEP 126 (291)
T ss_dssp HHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEECCCSS----HHHHHHHHHH-HHHTTCCCEEECG
T ss_pred HHHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEecCccC----HHHHHHHHHH-HHhCCCeEEEEeC
Confidence 4677778888733 11 11 1 125677778888877777798853 3555667777 6665523555554
Q ss_pred CCC-CCCCCcHHHHHHHHHHHHhhc
Q 016596 362 GHG-IKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 362 gc~-i~~~tp~Eni~a~~~a~~~yg 385 (386)
+.. .+.....+.+..+++++.++|
T Consensus 127 ~~~~~~~~~~d~~~~~~~~~a~e~g 151 (291)
T 3irs_A 127 GVWATPMHVDDRRLYPLYAFCEDNG 151 (291)
T ss_dssp GGSSSCCCTTCGGGHHHHHHHHHTT
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHcC
Confidence 421 122223456888899988876
No 321
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=37.42 E-value=88 Score=28.74 Aligned_cols=114 Identities=11% Similarity=0.143 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcC
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLD 307 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d 307 (386)
..+.++.+++.|+++|.+.-. .| .++++.+++. +.+ +++.+.+......+.+.|+|.+.++
T Consensus 91 ~~~~~~~~~~~g~d~V~l~~g--------------~p--~~~~~~l~~~--g~~-v~~~v~s~~~a~~a~~~GaD~i~v~ 151 (326)
T 3bo9_A 91 ADDLVKVCIEEKVPVVTFGAG--------------NP--TKYIRELKEN--GTK-VIPVVASDSLARMVERAGADAVIAE 151 (326)
T ss_dssp HHHHHHHHHHTTCSEEEEESS--------------CC--HHHHHHHHHT--TCE-EEEEESSHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHCCCCEEEECCC--------------Cc--HHHHHHHHHc--CCc-EEEEcCCHHHHHHHHHcCCCEEEEE
Q ss_pred CC-----CC-------HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC-CCCeEEecCCCCC
Q 016596 308 WT-----VD-------MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG-RWKHILNLGHGIK 366 (386)
Q Consensus 308 ~~-----~d-------l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~-~~g~Ils~gc~i~ 366 (386)
.. .. +.++++.++-.+...||| .|++++.+...--.+... +.+|+.++.|...
T Consensus 152 g~~~GG~~G~~~~~~ll~~i~~~~~iPviaaGGI------~~~~dv~~al~~GA~gV~vGs~~~~~~e~~~~ 217 (326)
T 3bo9_A 152 GMESGGHIGEVTTFVLVNKVSRSVNIPVIAAGGI------ADGRGMAAAFALGAEAVQMGTRFVASVESDVH 217 (326)
T ss_dssp CTTSSEECCSSCHHHHHHHHHHHCSSCEEEESSC------CSHHHHHHHHHHTCSEEEESHHHHTBSSCCSC
T ss_pred CCCCCccCCCccHHHHHHHHHHHcCCCEEEECCC------CCHHHHHHHHHhCCCEEEechHHHcCcccccc
No 322
>3ig9_A SOC small outer capsid protein; alpha/beta structure, viral protein; 1.90A {Enterobacteria phage RB69} PDB: 3ige_A
Probab=37.39 E-value=4.6 Score=28.52 Aligned_cols=19 Identities=26% Similarity=0.572 Sum_probs=16.6
Q ss_pred ccCccccCCCcCCCccccc
Q 016596 10 SNFPLYSSSHSNSNSRYVR 28 (386)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~ 28 (386)
-+|||||--|-++++.|.-
T Consensus 27 V~F~lYSdvhrIAgahYq~ 45 (78)
T 3ig9_A 27 VPFEIYSNEHRIADAHYQT 45 (78)
T ss_dssp EEHHHHHHSCCCCCSCEEE
T ss_pred eeeeeecchhhhcCceeEe
Confidence 4799999999999998854
No 323
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=37.32 E-value=2.1e+02 Score=24.97 Aligned_cols=99 Identities=9% Similarity=-0.004 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCcC--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHh-cC
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWAT--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLAL-TG 300 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e-~g 300 (386)
+|+.+.+.++.....|.....+.-+.+. +-+...| ....|.+.+.+..+.+. |...++-.|.....++.+.+ ++
T Consensus 15 ~T~~i~~~~~~~~~p~~~i~~~t~~~gp~~i~~~~d~-~~a~~~l~~~~~~l~~~--g~d~iviaCnt~~~l~~lr~~~~ 91 (245)
T 3qvl_A 15 MTETIGAAARAVAAPGTEILAVCPRAGVPSIEGHFDE-AIAAVGVLEQIRAGREQ--GVDGHVIASFGDPGLLAARELAQ 91 (245)
T ss_dssp HHHHHHHHHHHHCCTTEEEEEECCSSSCSSCCSHHHH-HHHHHHHHHHHHHHHHH--TCSEEEEC-CCCTTHHHHHHHCS
T ss_pred HHHHHHHHHHHhcCCCCEEEEEeCCCCchhhcChhHH-HHHHHHHHHHHHHHHHC--CCCEEEEeCCChhHHHHHHHHcC
Confidence 4444444444444345555555545543 4444444 45666666666655554 45677777865554677765 46
Q ss_pred CCEEEcCCCCCHHHHHHHhCCCeeEEe
Q 016596 301 VDVVSLDWTVDMAEGRRRLGPDVAVQG 327 (386)
Q Consensus 301 ~d~l~~d~~~dl~e~~~~~g~~~~l~G 327 (386)
+-++++.+ ..+..+.. .|+++.+++
T Consensus 92 iPvigi~e-~~~~~a~~-~~~rigVla 116 (245)
T 3qvl_A 92 GPVIGIAE-AAMHMATM-VATRFSIVT 116 (245)
T ss_dssp SCEEEHHH-HHHHHHHH-HCSCEEEEE
T ss_pred CCEECccH-HHHHHHHH-cCCEEEEEE
Confidence 66777632 12333333 466666665
No 324
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=36.96 E-value=81 Score=28.66 Aligned_cols=10 Identities=0% Similarity=-0.267 Sum_probs=6.3
Q ss_pred EEeecCcHHH
Q 016596 180 VLGFVGAPFT 189 (386)
Q Consensus 180 v~~~~~gPft 189 (386)
++..+.||..
T Consensus 92 ~v~~i~G~a~ 101 (287)
T 3tqv_A 92 RIFELKGNVR 101 (287)
T ss_dssp EEEEEEEEHH
T ss_pred EEEEEEEcHH
Confidence 4556777765
No 325
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=36.81 E-value=2e+02 Score=24.52 Aligned_cols=130 Identities=9% Similarity=0.037 Sum_probs=76.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCC-cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC------Cc--c--h-H
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSW-ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG------SG--G--L-L 293 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~-~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG------~~--~--~-l 293 (386)
+.+.+.++...+.|+..+.+.-.. ..-.+.+...+.+...++++.+.+.++ |+.+.+|.+. .. + . .
T Consensus 85 ~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~~E~~~~~~~~~~~~~~~~~~~ 162 (260)
T 1k77_A 85 ADIDLALEYALALNCEQVHVMAGVVPAGEDAERYRAVFIDNIRYAADRFAPH--GKRILVEALSPGVKPHYLFSSQYQAL 162 (260)
T ss_dssp HHHHHHHHHHHHTTCSEEECCCCBCCTTSCHHHHHHHHHHHHHHHHHHHGGG--TCEEEECCCCTTTSTTBSCCSHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEeCCccCCCcCccCCHHHHH
Confidence 445556666778899988764222 123466666777888999999999887 6788888873 21 1 1 2
Q ss_pred HHHHhcCCC--EEEcC------CCCCHHHHHHHhCCCeeEEe--cCCcC-cc-CCCHHHHHHHHHHHHHHcC-CCCeEE
Q 016596 294 ERLALTGVD--VVSLD------WTVDMAEGRRRLGPDVAVQG--NVDPG-AL-FGSKDFITNRINDTVRKAG-RWKHIL 359 (386)
Q Consensus 294 ~~l~e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l~G--~vd~~-~l-~gt~eev~~~v~~~i~~~~-~~g~Il 359 (386)
..+.+++.. .+.+| ...|+.+.-+.+++++.-+= +.+.. .+ .|+.+ -+.+.+.++..+ ++-+++
T Consensus 163 ~l~~~~~~~~~g~~~D~~h~~~~~~d~~~~l~~~~~~i~~vH~~D~~~r~~~G~G~id--~~~~~~~L~~~gy~g~i~~ 239 (260)
T 1k77_A 163 AIVEEVARDNVFIQLDTFHAQKVDGNLTHLIRDYAGKYAHVQIAGLPDRHEPDDGEIN--YPWLFRLFDEVGYQGWIGC 239 (260)
T ss_dssp HHHHHHCCTTEEEEEEHHHHHHHTCCHHHHHHHTTTSEEEEEECCTTTCCCSSSSSSC--HHHHHHHHHHTTCCSCEEE
T ss_pred HHHHHhCCCCEEEEeeHHHHHhhCCCHHHHHHHhhhheeEEEECCCCCCCCCCCCccC--HHHHHHHHHHcCCCceEEE
Confidence 344445533 23343 23588888888888754421 12111 22 34432 344556666666 544444
No 326
>3bdk_A D-mannonate dehydratase; xylose isomerase-like TIM barrel, lyase; HET: DNO; 2.50A {Streptococcus suis} PDB: 3ban_A* 3dbn_A* 3fvm_A
Probab=36.70 E-value=2.7e+02 Score=26.16 Aligned_cols=71 Identities=14% Similarity=0.112 Sum_probs=45.9
Q ss_pred CCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-------CC--c---c-hHHHHH-hcCC--CEEEcC-------CC
Q 016596 253 LSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-------GS--G---G-LLERLA-LTGV--DVVSLD-------WT 309 (386)
Q Consensus 253 iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-------G~--~---~-~l~~l~-e~g~--d~l~~d-------~~ 309 (386)
++.+.-.+.+...++++++.+.+. |+.+.+|.. |- . . .+..+. ..+- ..+.+| +.
T Consensus 189 ~~~e~~w~~l~~~L~~i~~~Aee~--GV~Laiep~dpp~~~~Gl~riv~t~e~~~rll~~vdsp~~gl~lDtG~l~~~~~ 266 (386)
T 3bdk_A 189 ISEEDLWANLEYFIKAILPTAEEA--GVKMAIHPDDPPYGIFGLPRIITGQEAVERFLNLYDSEHNGITMCVGSYASDPK 266 (386)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHSS--SCEEEECCCSSSSCCTTCCCCCCSHHHHHHHHHTTCSTTEEEEEEHHHHHTSTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh--CCEEEEeeCCcccccccCCceeCCHHHHHHHHHhcCCCCEEEEEccCchhhcCC
Confidence 354555567777899999999776 688899974 22 1 1 243343 3443 344443 24
Q ss_pred CCHHHHHHHhC--CCeeE
Q 016596 310 VDMAEGRRRLG--PDVAV 325 (386)
Q Consensus 310 ~dl~e~~~~~g--~~~~l 325 (386)
.|+.++-++++ ++|..
T Consensus 267 ~D~~~~i~~~~~~~RI~h 284 (386)
T 3bdk_A 267 NDVLAMTEYALKRNRINF 284 (386)
T ss_dssp CCHHHHHHHHHHTTCEEE
T ss_pred CCHHHHHHHhCCcCeEEE
Confidence 78999999998 77665
No 327
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=36.59 E-value=89 Score=28.52 Aligned_cols=60 Identities=23% Similarity=0.301 Sum_probs=40.8
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcCC
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLDW 308 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d~ 308 (386)
-++..+++|+|+|.+ |. ++|++.++. ++.+.. .+.+-..|+.+ .+..++++|+|.+++..
T Consensus 221 e~~eAl~aGaD~I~L-Dn----~~~~~l~~a--------v~~i~~-----~v~ieaSGGI~~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 221 QLRTALAHGARSVLL-DN----FTLDMMRDA--------VRVTEG-----RAVLEVSGGVNFDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp HHHHHHHTTCEEEEE-ES----CCHHHHHHH--------HHHHTT-----SEEEEEESSCSTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHHcCCCEEEE-CC----CCHHHHHHH--------HHHhCC-----CCeEEEEcCCCHHHHHHHHHcCCCEEEECC
Confidence 345566789998885 44 566554443 333422 35677788876 48999999999998754
No 328
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=36.34 E-value=2.4e+02 Score=25.29 Aligned_cols=69 Identities=7% Similarity=-0.138 Sum_probs=42.7
Q ss_pred HHHHHHHHhCCC-EEEEec--CCc----CCC-CHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--h----HHH
Q 016596 230 KYVQYQADNGAQ-AVQIFD--SWA----TEL-SPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--L----LER 295 (386)
Q Consensus 230 ~~~~~~~e~G~d-~i~i~d--~~~----~~i-Sp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~----l~~ 295 (386)
+.++.+.++|+| +|-+.- |.. .+. +++ ...++++.+++.. +.|+++-+..++. - ...
T Consensus 110 ~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e--------~~~~iv~~vr~~~-~~Pv~vKi~~~~~~~~~~~~a~~ 180 (311)
T 1jub_A 110 AMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFE--------ATEKLLKEVFTFF-TKPLGVKLPPYFDLVHFDIMAEI 180 (311)
T ss_dssp HHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHH--------HHHHHHHHHTTTC-CSCEEEEECCCCSHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHH--------HHHHHHHHHHHhc-CCCEEEEECCCCCHHHHHHHHHH
Confidence 444556678999 887643 221 111 333 2467888888764 5788888776653 1 345
Q ss_pred HHhcCCCEEEcC
Q 016596 296 LALTGVDVVSLD 307 (386)
Q Consensus 296 l~e~g~d~l~~d 307 (386)
+.+.|+|.+.+.
T Consensus 181 ~~~~G~d~i~v~ 192 (311)
T 1jub_A 181 LNQFPLTYVNSV 192 (311)
T ss_dssp HTTSCCCEEEEC
T ss_pred HHHcCCcEEEec
Confidence 567899987653
No 329
>1nfp_A LUXF gene product; flavin mononucleotide, myristate, flavoprotein; HET: FMN MYR; 1.60A {Photobacterium leiognathi} SCOP: c.1.16.2
Probab=36.29 E-value=24 Score=30.50 Aligned_cols=27 Identities=7% Similarity=0.001 Sum_probs=22.5
Q ss_pred CCCHHHHHH-HHHHHHHHcCCCCeEEec
Q 016596 335 FGSKDFITN-RINDTVRKAGRWKHILNL 361 (386)
Q Consensus 335 ~gt~eev~~-~v~~~i~~~~~~g~Ils~ 361 (386)
.||||+|.+ .+++.++..|-..+++..
T Consensus 171 vGtpe~v~~~~l~~~~~~~G~de~~~~~ 198 (228)
T 1nfp_A 171 AGNFDTCLHHVAEMAQGLNNKVDFLFCF 198 (228)
T ss_dssp EECHHHHHHHHHHHHHHTTTCEEEEEEC
T ss_pred CcCHHHHHHHHHHHHHHHhCCCEEEEEe
Confidence 689999999 999999988744777754
No 330
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=36.05 E-value=82 Score=27.60 Aligned_cols=28 Identities=11% Similarity=0.051 Sum_probs=16.3
Q ss_pred CCHHHHHHHHHHHHHHcC--CCCeE-EecCC
Q 016596 336 GSKDFITNRINDTVRKAG--RWKHI-LNLGH 363 (386)
Q Consensus 336 gt~eev~~~v~~~i~~~~--~~g~I-ls~gc 363 (386)
+..++..+..++.++.+. |..+| +.+|.
T Consensus 77 ~~~~~~~~~~~~~i~~A~~lG~~~v~~~~g~ 107 (286)
T 3dx5_A 77 ADFEKTIEKCEQLAILANWFKTNKIRTFAGQ 107 (286)
T ss_dssp SCHHHHHHHHHHHHHHHHHHTCCEEEECSCS
T ss_pred hhHHHHHHHHHHHHHHHHHhCCCEEEEcCCC
Confidence 456666677777776654 44444 44443
No 331
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=35.98 E-value=81 Score=28.30 Aligned_cols=70 Identities=11% Similarity=0.016 Sum_probs=45.6
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCC-----CCCCcHHHHHHHHHHHHhhc
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGI-----KVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i-----~~~tp~Eni~a~~~a~~~yg 385 (386)
+.++.+..++++.-.++|+|. .+++..++++++++..+=.|.-+.+...- +.....+.+..+++++.++|
T Consensus 84 ~~~~~~~~p~r~~~~~~v~p~----~~~~~~~el~~~~~~~g~~gi~i~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 158 (327)
T 2dvt_A 84 LAEECAKRPDRFLAFAALPLQ----DPDAATEELQRCVNDLGFVGALVNGFSQEGDGQTPLYYDLPQYRPFWGEVEKLD 158 (327)
T ss_dssp HHHHHHHCTTTEEEEECCCTT----SHHHHHHHHHHHHHTTCCCEEEEESSBCCTTCCSCBCTTSGGGHHHHHHHHHHT
T ss_pred HHHHHhhCCCceEEEeecCcC----CHHHHHHHHHHHHhcCCceEEEECCCCCCCcccCCCCCCCcchHHHHHHHHHcC
Confidence 455666778777667888874 35667788888887655345566665321 11223456888888888876
No 332
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=35.81 E-value=2.2e+02 Score=24.79 Aligned_cols=140 Identities=9% Similarity=0.083 Sum_probs=81.8
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEE--ecCCc----CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe
Q 016596 213 QPKVLHALLRKFTTSMAKYVQYQADNGAQAVQI--FDSWA----TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA 286 (386)
Q Consensus 213 ~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i--~d~~~----~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~ 286 (386)
+|+...+.+ +.+.+.++...+.|++.+.+ ...++ .-.+.+...+.+...++++.+.++++ |+.+.+|.
T Consensus 79 d~~~r~~~~----~~~~~~i~~a~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lEn 152 (294)
T 3vni_A 79 DPDIRKNAK----AFYTDLLKRLYKLDVHLIGGALYSYWPIDYTKTIDKKGDWERSVESVREVAKVAEAC--GVDFCLEV 152 (294)
T ss_dssp CHHHHHHHH----HHHHHHHHHHHHHTCCEEEESTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHT--TCEEEEEC
T ss_pred CHHHHHHHH----HHHHHHHHHHHHhCCCeeeccccCCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEe
Confidence 555444444 44455566677789998863 22232 13566667777888999999999887 68888998
Q ss_pred cCC-------c-c-hHHHHHhcCCC--EEEcCC------CCCHHHHHHHhCCCeeEEecCCcC--cc-CCCHHHHHHHHH
Q 016596 287 SGS-------G-G-LLERLALTGVD--VVSLDW------TVDMAEGRRRLGPDVAVQGNVDPG--AL-FGSKDFITNRIN 346 (386)
Q Consensus 287 cG~-------~-~-~l~~l~e~g~d--~l~~d~------~~dl~e~~~~~g~~~~l~G~vd~~--~l-~gt~eev~~~v~ 346 (386)
++. . . ....+.+++-. .+.+|. ..|+.+.-+++++++..+=-=|.. .. .|..+ -+.+.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~~r~~pG~G~id--~~~~~ 230 (294)
T 3vni_A 153 LNRFENYLINTAQEGVDFVKQVDHNNVKVMLDTFHMNIEEDSIGGAIRTAGSYLGHLHTGECNRKVPGRGRIP--WVEIG 230 (294)
T ss_dssp CCTTTCSSCCSHHHHHHHHHHHCCTTEEEEEEHHHHHHHCSCHHHHHHHHGGGEEEEEECCTTSCCTTSSSCC--HHHHH
T ss_pred cCcccCcccCCHHHHHHHHHHcCCCCEEEEEEhhhhHHcCCCHHHHHHHhhhhEeEEEeCCCCCCCCCCCCcC--HHHHH
Confidence 741 1 1 23444455533 233342 258888888888775442211221 12 34432 35556
Q ss_pred HHHHHcC-CCCeEEe
Q 016596 347 DTVRKAG-RWKHILN 360 (386)
Q Consensus 347 ~~i~~~~-~~g~Ils 360 (386)
+.++..+ .|.+++=
T Consensus 231 ~~L~~~gy~g~~~lE 245 (294)
T 3vni_A 231 EALADIGYNGSVVME 245 (294)
T ss_dssp HHHHHTTCCSCEEEC
T ss_pred HHHHHhCCCCcEEEE
Confidence 6667767 5555554
No 333
>3txv_A Probable tagatose 6-phosphate kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.80A {Sinorhizobium meliloti}
Probab=35.77 E-value=3.1e+02 Score=26.49 Aligned_cols=122 Identities=16% Similarity=0.108 Sum_probs=68.8
Q ss_pred HHHHhCCCEEEEecCC-----cCC--CCHHHHHHhhHHHHHHHHHHHHhhCCCCc---EEEEec-CCc------------
Q 016596 234 YQADNGAQAVQIFDSW-----ATE--LSPVDFEEFSLPYLKQIVDTVKQTHPDLS---LILYAS-GSG------------ 290 (386)
Q Consensus 234 ~~~e~G~d~i~i~d~~-----~~~--iSp~~f~ef~~P~~k~l~~~i~~~~~~~~---~~~H~c-G~~------------ 290 (386)
+..+.+..+|+-.... ++. +.|+.|..++. ++.+.. ++| +++|.+ |..
T Consensus 40 aAee~~sPVIIe~t~~qv~~~gGYtG~~p~~f~~~V~----~~A~~~-----~vPv~pV~LhlDHg~~~~w~~~~~~~am 110 (450)
T 3txv_A 40 RAHREKAPVLIEATCNQVNQDGGYTGMTPEDFTRFVG----AIADRI-----EFPREKILLGGDHLGPNPWKHLPADEAM 110 (450)
T ss_dssp HHHHSCSCEEEEEETTTSCTTCTTTTCCHHHHHHHHH----HHHHHT-----TCCGGGEEEEEEEESSGGGTTSCHHHHH
T ss_pred HHHHhCCCEEEEcChhhHhhcCCCCCCCHHHHHHHHH----HHHHHc-----CcCcccEEEECCCCCCcccccccHHHHH
Confidence 3445677776543321 332 45666666543 334333 456 689874 432
Q ss_pred ----chHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC---------CCCe
Q 016596 291 ----GLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG---------RWKH 357 (386)
Q Consensus 291 ----~~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~---------~~g~ 357 (386)
..+...++.|+..+.+|..... +++ || .-|.+-|.+.++++++.+. .-++
T Consensus 111 ~~a~e~i~~aI~AGFtSVMiD~S~~p------~ee------Ni-----~lt~evva~rtaeL~~~A~~~~~~~g~~e~~y 173 (450)
T 3txv_A 111 AKAEAMITAYAKAGFTKLHLDTSMGC------AGE------PT-----ALPDATTAARAARLAAVAEDAVGGRGGVLPVY 173 (450)
T ss_dssp HHHHHHHHHHHTTTCCEEEECCCBCC------SSS------CS-----BCCHHHHHHHHHHHHHHHHHTC------CCEE
T ss_pred HHHHHHHHHHHHcCCCEEEECCCCCc------hhh------cc-----chhHHHHHHHHHHHHHHHHHHHhhcCCCCceE
Confidence 2345556778888888864321 111 33 3567777777777776542 1378
Q ss_pred EEecCCCCCC----------CCcHHHHHHHHHHH
Q 016596 358 ILNLGHGIKV----------GTPEENVAHFFEVA 381 (386)
Q Consensus 358 Ils~gc~i~~----------~tp~Eni~a~~~a~ 381 (386)
++++--++|. -|.||..+.++++.
T Consensus 174 viGtEvpvpGGa~~~~~~~~~T~PeeA~~fv~~~ 207 (450)
T 3txv_A 174 IIGTEVPIPGGALEELDTLEVTAPEAAIETVRVH 207 (450)
T ss_dssp EEECC-------------CCCCCHHHHHHHHHHH
T ss_pred EeeeecCCCCccccccccCCCCCHHHHHHHHHHH
Confidence 8887333322 48888888888753
No 334
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=35.72 E-value=2.2e+02 Score=24.77 Aligned_cols=97 Identities=13% Similarity=0.169 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCC-cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-h-HHHHHhcCC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSW-ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-L-LERLALTGV 301 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~-~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~-l~~l~e~g~ 301 (386)
.+.+.+.++...+.|++.+.+.-.. ..- +++.++ .+...++++.+.++++ |+.+.+|...+.. . ...+.+++.
T Consensus 101 ~~~~~~~i~~a~~lG~~~v~~~~G~~~~~-~~~~~~-~~~~~l~~l~~~a~~~--Gv~l~lE~~~~~~~~~~~l~~~~~~ 176 (290)
T 3tva_A 101 VAEMKEISDFASWVGCPAIGLHIGFVPES-SSPDYS-ELVRVTQDLLTHAANH--GQAVHLETGQESADHLLEFIEDVNR 176 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCCCCT-TSHHHH-HHHHHHHHHHHHHHTT--TCEEEEECCSSCHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCCCccc-chHHHH-HHHHHHHHHHHHHHHc--CCEEEEecCCCCHHHHHHHHHhcCC
Confidence 4455566666777899988874321 111 445554 4567889999999887 6888899887543 3 344555553
Q ss_pred C--EEEcC------C-CCCHHHHHHHhCCCeeE
Q 016596 302 D--VVSLD------W-TVDMAEGRRRLGPDVAV 325 (386)
Q Consensus 302 d--~l~~d------~-~~dl~e~~~~~g~~~~l 325 (386)
. .+.+| . ..|+.+.-+++++++..
T Consensus 177 ~~~g~~~D~~h~~~~g~~d~~~~l~~~~~~i~~ 209 (290)
T 3tva_A 177 PNLGINFDPANMILYGTGNPIEALRKVARYVRS 209 (290)
T ss_dssp TTEEEEECHHHHHHTTCSCHHHHHHHHGGGEEE
T ss_pred CCEEEEeccHHHHHhCCCCHHHHHHHHHhhheE
Confidence 2 23333 1 26888888888876543
No 335
>1f75_A Undecaprenyl pyrophosphate synthetase; parallel beta sheet, NEW fold for isoprenoid synthase, peptidoglycan synthesis, transferase; 2.20A {Micrococcus luteus} SCOP: c.101.1.1
Probab=35.43 E-value=1.6e+02 Score=26.00 Aligned_cols=106 Identities=13% Similarity=0.208 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhCCCEEEEec-CCcCCCCHH----HHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchH-HHHHhcC
Q 016596 227 SMAKYVQYQADNGAQAVQIFD-SWATELSPV----DFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLL-ERLALTG 300 (386)
Q Consensus 227 ~~~~~~~~~~e~G~d~i~i~d-~~~~~iSp~----~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l-~~l~e~g 300 (386)
.+.+.++.+.+.|+..+.+.. +..++=.|+ ..-+++..++++.++.+++. + +-++..|+...+ +.+.+.
T Consensus 52 ~l~~iv~~c~~~GI~~lTlYaFSteNwkRp~~EV~~Lm~l~~~~l~~~~~~l~~~--~--vr~~~iG~~~~lp~~~~~~- 126 (249)
T 1f75_A 52 TVRKITRYASDLGVKYLTLYAFSTENWSRPKDEVNYLMKLPGDFLNTFLPELIEK--N--VKVETIGFIDDLPDHTKKA- 126 (249)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEC------------CGGGTHHHHHHHHHHHHHHHT--T--CEEEEESCGGGSCHHHHHH-
T ss_pred HHHHHHHHHHHcCCCEEEEEEecccccCCCHHHHHHHHHHHHHHHHHHHHHHHHc--C--eEEEEeCChhhCCHHHHHH-
Confidence 344455556778999988765 222211121 11134555666666667765 3 467888987644 333321
Q ss_pred CCEEEcCCCCCHHHHHHHhCCCeeEEecCCcC-cc-CCCHHHHHHHHHHHHHHc
Q 016596 301 VDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPG-AL-FGSKDFITNRINDTVRKA 352 (386)
Q Consensus 301 ~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~-~l-~gt~eev~~~v~~~i~~~ 352 (386)
+.++.+...+. .++.-. .+ +|+.+||.+.++++.+..
T Consensus 127 -----------i~~~~~~T~~n----~~l~lnia~~YggR~eIv~A~r~l~~~v 165 (249)
T 1f75_A 127 -----------VLEAKEKTKHN----TGLTLVFALNYGGRKEIISAVQLIAERY 165 (249)
T ss_dssp -----------HHHHHHTTTTC----CSCEEEEECSCCHHHHHHHHHHHHHHHH
T ss_pred -----------HHHHHHhhcCC----CceEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 12222222211 111111 13 577777777777776643
No 336
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=35.37 E-value=2.5e+02 Score=25.29 Aligned_cols=135 Identities=13% Similarity=0.113 Sum_probs=73.2
Q ss_pred HHHHHHHHhCCCEEEEe--cCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc----c-hHHHHHhcCC
Q 016596 230 KYVQYQADNGAQAVQIF--DSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG----G-LLERLALTGV 301 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~--d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~----~-~l~~l~e~g~ 301 (386)
+-+.+..++||..+.+. |+-+. -.+|+.|+|+ ++.+++..++.. +..+.|.. . .+..+ ++..
T Consensus 38 ~~A~~~~~AGAaivHlH~Rd~~G~ps~d~~~~~e~--------~~~IR~~~pd~i-i~~TTgg~~~~~eeR~~~~-~~~P 107 (284)
T 3chv_A 38 ESTQEAFEAGAAIAHCHVRNDDGTPSSDPDRFARL--------TEGLHTHCPGMI-VQFSTGGRSGAGQARGGML-PLKP 107 (284)
T ss_dssp HHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHH--------HHHHHHHSTTCE-EEECCCTTTCCGGGGGTTG-GGCC
T ss_pred HHHHHHHHcCCcEEEeeecCCCCCcCCCHHHHHHH--------HHHHHHhCCCeE-EEeCCCCCCCCHHHHHHhh-hcCC
Confidence 34445779999999886 43332 5788887774 556666544443 33344322 1 23333 4555
Q ss_pred CEEEcCCC----------CC---HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC-CC----CeEEecCC
Q 016596 302 DVVSLDWT----------VD---MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG-RW----KHILNLGH 363 (386)
Q Consensus 302 d~l~~d~~----------~d---l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~-~~----g~Ils~gc 363 (386)
+..+++.. .+ +.+..+.+.. -||-|..---++..++. ++++++.+- ++ .|+|+..-
T Consensus 108 e~aSl~~Gs~Nf~~~v~~n~~~~~~~~~~~~~e-----~Gv~pE~e~fd~g~l~~-~~~l~~~Gll~~p~~~~~vlGv~~ 181 (284)
T 3chv_A 108 DMASLSVGSNNFPSRVYENPPDLVDWLAAQMRS-----YRVTPEIEAFDLSHILR-AIDMHGRGLLYGKLYVQFVMGVKN 181 (284)
T ss_dssp SEEEECCSCEECSSSEECCCHHHHHHHHHHHHH-----HTCEEEEEESSHHHHHH-HHHHHHTTCSCSSCEEEEEECCTT
T ss_pred CEEEecCcccccCCccccCCHHHHHHHHHHHHH-----cCCEEEEEEECHHHHHH-HHHHHHcCCCCCCceEEEEEecCC
Confidence 66555431 12 3333333322 24555543334556655 467777654 32 35555333
Q ss_pred CCCCCCcHHHHHHHHHHHH
Q 016596 364 GIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 364 ~i~~~tp~Eni~a~~~a~~ 382 (386)
++ ...++++.+|++.+-
T Consensus 182 g~--~~~~~~L~~~~~~~p 198 (284)
T 3chv_A 182 AM--PADREVFDFYVRMMR 198 (284)
T ss_dssp SC--CCCHHHHHHHHHHHH
T ss_pred CC--CCCHHHHHHHHHhcc
Confidence 44 356999999998764
No 337
>3i4e_A Isocitrate lyase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.69A {Burkholderia pseudomallei}
Probab=35.36 E-value=3.1e+02 Score=26.38 Aligned_cols=142 Identities=11% Similarity=0.006 Sum_probs=79.3
Q ss_pred HHHHHHHHhCCCEEEEecCCc-----------CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC----------
Q 016596 230 KYVQYQADNGAQAVQIFDSWA-----------TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG---------- 288 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~-----------~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG---------- 288 (386)
+.++.++++|+-+|.|-|... .+++.+.+-+- ++...++....+.+..++--++-
T Consensus 171 ~~vk~~~~aGaaGi~iEDq~~~~KkCGH~~gk~lv~~~e~v~r----I~Aar~A~~~~g~d~~IiARTDa~~a~l~~s~~ 246 (439)
T 3i4e_A 171 ELMKAMIEAGASGVHFEDQLASVKKCGHMGGKVLVPTREAVAK----LTAARLAADVMGTPTVLVARTDAEAADLITSDI 246 (439)
T ss_dssp HHHHHHHHHTCSEEEEESBCGGGCBCSTTCBCCBCCHHHHHHH----HHHHHHHHHHHTCCCEEEEEECTTTCCEESCCC
T ss_pred HHHHHHHHcCCEEEEEeCCCCCccccCCCCCCeecCHHHHHHH----HHHHHHHHHhcCCCeEEEEEcCccccccccccc
Confidence 445668899999999988542 26777666442 23333444433323222223321
Q ss_pred ----------------------Ccc----hHHHHHhcCCCEEEcCC-CCCHHHHHHH-------hCCCeeEEecCCcCc-
Q 016596 289 ----------------------SGG----LLERLALTGVDVVSLDW-TVDMAEGRRR-------LGPDVAVQGNVDPGA- 333 (386)
Q Consensus 289 ----------------------~~~----~l~~l~e~g~d~l~~d~-~~dl~e~~~~-------~g~~~~l~G~vd~~~- 333 (386)
... ....+.+ |+|++-++. ..|++++++. ++.+ .+.+|..|..
T Consensus 247 d~~d~~fi~G~r~~eg~~~~~~gldeAI~Ra~AY~~-GAD~if~E~~~~~~eei~~f~~~v~~~~P~~-~l~~~~sPsfn 324 (439)
T 3i4e_A 247 DDNDKPYLTGERTVEGFFRTKPGLEQAISRGLAYAP-YADLIWCETGKPDLEYAKKFAEAIHKQFPGK-LLSYNCSPSFN 324 (439)
T ss_dssp CTTTGGGEEEEECTTSCEEECCSHHHHHHHHHHHTT-TCSEEEECCSSCCHHHHHHHHHHHHHHSTTC-EEEEECCSSSC
T ss_pred ccccchhhcccCcccccccccCCHHHHHHHHHHHHh-hCCEEEecCCCCCHHHHHHHHHHhcccCCce-EEeeCCCCCCc
Confidence 111 1234567 999998865 3577665443 3444 4556666643
Q ss_pred -c-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhh
Q 016596 334 -L-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 334 -l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
- .-|+++++..+.++-+ + |-.+++-+ ...--....+|.+++++|
T Consensus 325 w~~~~~~~~~~~f~~eL~~-l-Gv~~v~~~-----la~~raa~~A~~~~a~~i 370 (439)
T 3i4e_A 325 WKKNLDDATIAKFQKELGA-M-GYKFQFIT-----LAGFHALNYSMFNLAHGY 370 (439)
T ss_dssp HHHHSCHHHHHTHHHHHHH-H-TCCEEEET-----THHHHHHHHHHHHHHHHH
T ss_pred CcccCCHHHHHHHHHHHHH-c-CCeEEEeC-----hHHHHHHHHHHHHHHHHH
Confidence 1 4578888887777765 3 22444432 222345566777777765
No 338
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=35.26 E-value=2.3e+02 Score=24.86 Aligned_cols=16 Identities=19% Similarity=0.252 Sum_probs=11.1
Q ss_pred HHHHHHHHhCCCEEEE
Q 016596 230 KYVQYQADNGAQAVQI 245 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i 245 (386)
+.++.+.++|+|.+.+
T Consensus 44 ~~i~~l~~~G~d~lHv 59 (246)
T 3inp_A 44 DDVKAVLAAGADNIHF 59 (246)
T ss_dssp HHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHcCCCEEEE
Confidence 3445566789998775
No 339
>4aaj_A N-(5'-phosphoribosyl)anthranilate isomerase; alpha/beta-barrel, hyperthermophilic, phosphoribo isomerase; 1.75A {Pyrococcus furiosus}
Probab=35.24 E-value=71 Score=27.88 Aligned_cols=80 Identities=16% Similarity=0.129 Sum_probs=49.3
Q ss_pred HHHHhcCCCEEEcCCC------CCHHHHHHH-hCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCC
Q 016596 294 ERLALTGVDVVSLDWT------VDMAEGRRR-LGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIK 366 (386)
Q Consensus 294 ~~l~e~g~d~l~~d~~------~dl~e~~~~-~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~ 366 (386)
..+..+.+|.+-+|.. .|..-++.. ....+.|.||++|. .|. ++|+..+.-|.=+|+|-+-|
T Consensus 140 ~~~~~~~~d~~LlDs~GGtG~~fDW~~~~~~~~~~p~iLAGGL~pe-------NV~----~Ai~~~~P~gVDVsSGVEs~ 208 (228)
T 4aaj_A 140 SEISRYNADMVLLDTGAGSGKLHDLRVSSLVARKIPVIVAGGLNAE-------NVE----EVIKVVKPYGVDVSSGVEKY 208 (228)
T ss_dssp HHHHHSCCSEEEEEC-------CCCHHHHHHHHHSCEEEESSCCTT-------THH----HHHHHHCCSEEEESGGGEET
T ss_pred HHHhccCCCEEccCCCCCCcCcCChHHHHHhhhcCCeEEECCCCHH-------HHH----HHHHHhCCCEEEeCCCCCCC
Confidence 3444556777655532 354433332 12347899999873 333 33444454466678887755
Q ss_pred CCCcHHHHHHHHHHHHhh
Q 016596 367 VGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 367 ~~tp~Eni~a~~~a~~~y 384 (386)
.--.++.|+++++++|+.
T Consensus 209 G~KD~~KI~~Fi~~vr~v 226 (228)
T 4aaj_A 209 GIKDPKLVEEFVRRAKNV 226 (228)
T ss_dssp TEECHHHHHHHHHHHHHC
T ss_pred CCcCHHHHHHHHHHHhcc
Confidence 445899999999999974
No 340
>4do7_A Amidohydrolase 2; enzyme function initiative, EFI, structural TIM-barrel fold, putative lactonase; 1.70A {Burkholderia multivorans} PDB: 4dlm_A 4dnm_A* 4dlf_A
Probab=35.00 E-value=1.6e+02 Score=26.35 Aligned_cols=100 Identities=11% Similarity=0.019 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHhhCCCCcEEEEecCCc-c-hHHHHHhcC-CCEE--EcCCCC--------C-H----HHHHHHhC-C
Q 016596 261 FSLPYLKQIVDTVKQTHPDLSLILYASGSG-G-LLERLALTG-VDVV--SLDWTV--------D-M----AEGRRRLG-P 321 (386)
Q Consensus 261 f~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~-~l~~l~e~g-~d~l--~~d~~~--------d-l----~e~~~~~g-~ 321 (386)
.-.|.+.++++.+.+. |+++.+|+-... . ..+.+.++| +.++ ++.... . . ..+.+... .
T Consensus 119 ~~~~~~~~~~~~~~~~--glpv~ih~~~~~l~~l~~ll~~~P~l~iVi~H~G~p~~~~~~~~~~~~~~w~~~l~~la~~~ 196 (303)
T 4do7_A 119 VDDADFARGVAWLQAN--DYVYDVLVFERQLPDVQAFCARHDAHWLVLDHAGKPALAEFDRDDTALARWRAALRELAALP 196 (303)
T ss_dssp HHCHHHHHHHHHHHHT--TCEEEECCCGGGHHHHHHHHHHCCSSCEEEGGGGCCCGGGCC---CHHHHHHHHHHHHHTST
T ss_pred ccCHHHHHHHHHHHHC--CCeEEEecCHHHHHHHHHHHHHCCCCCEEEeCCCCCCccccccccchHHHHHHHHHHHHhCC
Confidence 4457778888888887 689999976543 2 346666776 5555 333211 1 1 12222221 1
Q ss_pred CeeEEecCCcCcc-----------CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCC
Q 016596 322 DVAVQGNVDPGAL-----------FGSKDFITNRINDTVRKAGRWKHILNLGHGIK 366 (386)
Q Consensus 322 ~~~l~G~vd~~~l-----------~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~ 366 (386)
++-+ +.+.+ ..+.++++..++.+++..|..+.+++++....
T Consensus 197 nv~~----klSg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~dri~fgSD~P~~ 248 (303)
T 4do7_A 197 HVVC----KLSGLVTEADWRRGLRASDLRHIEQCLDAALDAFGPQRLMFGSDWPVC 248 (303)
T ss_dssp TEEE----EECSCGGGSCTTTCCCHHHHHHHHHHHHHHHHHHCGGGEEECCCBTGG
T ss_pred CEEE----EeCCccccccccccccCCCHHHHHHHHHHHHHHhCcccEEEeCCCCCC
Confidence 2221 22221 12367888899999999987799999886543
No 341
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=34.91 E-value=1.6e+02 Score=26.64 Aligned_cols=69 Identities=16% Similarity=0.191 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec-CCcchHHHHHhcCCCEE
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS-GSGGLLERLALTGVDVV 304 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c-G~~~~l~~l~e~g~d~l 304 (386)
+-.++-++++.++|||.|++- . ..-+++..++ +.+.++. .+|+++..- +...-.+.|.++|+..+
T Consensus 170 ~~ai~Ra~ay~eAGAd~i~~e-~--~~~~~~~~~~--------i~~~~~~---~~P~i~~~~~~~~~~~~eL~~lGv~~v 235 (295)
T 1s2w_A 170 DEALKRAEAYRNAGADAILMH-S--KKADPSDIEA--------FMKAWNN---QGPVVIVPTKYYKTPTDHFRDMGVSMV 235 (295)
T ss_dssp HHHHHHHHHHHHTTCSEEEEC-C--CSSSSHHHHH--------HHHHHTT---CSCEEECCSTTTTSCHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHcCCCEEEEc-C--CCCCHHHHHH--------HHHHcCC---CCCEEEeCCCCCCCCHHHHHHcCCcEE
Confidence 556677788999999999862 1 1223555544 4555542 257665432 11123788999999988
Q ss_pred EcCC
Q 016596 305 SLDW 308 (386)
Q Consensus 305 ~~d~ 308 (386)
++..
T Consensus 236 ~~~~ 239 (295)
T 1s2w_A 236 IWAN 239 (295)
T ss_dssp EECS
T ss_pred EECh
Confidence 7764
No 342
>3tjl_A NADPH dehydrogenase; OLD yellow enzyme, flavin mononucleotide, TIM barrel, NADPH oxidoreductase, enone reductase; HET: FMN; 1.50A {Scheffersomyces stipitis cbs 6054} PDB: 3upw_A* 4df2_A*
Probab=34.75 E-value=2.9e+02 Score=26.28 Aligned_cols=110 Identities=15% Similarity=0.116 Sum_probs=60.8
Q ss_pred HHHHHH-HHHHHHHHHHhCCCEEEEecCCc----CCCCHHH------H---HHhhHHHHHHHHHHHHhhCCCCcEEEEec
Q 016596 222 RKFTTS-MAKYVQYQADNGAQAVQIFDSWA----TELSPVD------F---EEFSLPYLKQIVDTVKQTHPDLSLILYAS 287 (386)
Q Consensus 222 ~~~~~~-~~~~~~~~~e~G~d~i~i~d~~~----~~iSp~~------f---~ef~~P~~k~l~~~i~~~~~~~~~~~H~c 287 (386)
+.+.+. ..+.++...++|.|+|-|.-.-+ .|+||.. | -|-=..+..++++++++..+.-++.+-+.
T Consensus 163 ~~ii~~~~~~aa~~a~~aGfdgveih~~~GYLl~QFLsp~~N~r~D~YGGs~enr~r~~~ei~~av~~~~~~~~v~~r~~ 242 (407)
T 3tjl_A 163 KDLVYEAYTNAAQKAMDAGFDYIELHAAHGYLLDQFLQPCTNQRTDEYGGSIENRARLILELIDHLSTIVGADKIGIRIS 242 (407)
T ss_dssp HHHHHTHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHSTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHHCGGGEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEECCccchHHHHhcCccccccCCcCCCChhhChHHHHHHHHHHHHHhCCCeEEEEEC
Confidence 333444 55666677889999998864332 1444421 1 01113355566666655432125666655
Q ss_pred C-----------C----c---c-hHHHH---HhcC--CCEEEcCC-C-------------CCHHHHHHHhCCCeeEEecC
Q 016596 288 G-----------S----G---G-LLERL---ALTG--VDVVSLDW-T-------------VDMAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 288 G-----------~----~---~-~l~~l---~e~g--~d~l~~d~-~-------------~dl~e~~~~~g~~~~l~G~v 329 (386)
. + . . ++..+ .+.| ++.+++.. . ..+..+++.+..-+...|++
T Consensus 243 ~~~~~~g~~~~~d~~~~~~~~~~l~~~L~~~~~~G~~l~ylhv~~~~~~~~~~~~~~~~~~~~~~ir~~~~~PvI~~Ggi 322 (407)
T 3tjl_A 243 PWATFQNMKAHKDTVHPLTTFSYLVHELQQRADKGQGIAYISVVEPRVSGNVDVSEEDQAGDNEFVSKIWKGVILKAGNY 322 (407)
T ss_dssp TTCCGGGCCGGGSSSCHHHHHHHHHHHHHHHHHTTCCCSEEEEECTTEETTEECCGGGCCCCSHHHHHHCCSEEEEESCG
T ss_pred cccccCCCcccccccccHHHHHHHHHHHHhHhhcCCceeEEEEEccccCCCCcCCccchhHHHHHHHHHhCCCEEecCCC
Confidence 3 2 0 1 23566 6678 88887631 1 23677888886655666766
Q ss_pred Cc
Q 016596 330 DP 331 (386)
Q Consensus 330 d~ 331 (386)
.+
T Consensus 323 ~~ 324 (407)
T 3tjl_A 323 SY 324 (407)
T ss_dssp GG
T ss_pred CC
Confidence 53
No 343
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=34.27 E-value=1.1e+02 Score=27.92 Aligned_cols=41 Identities=12% Similarity=0.225 Sum_probs=29.7
Q ss_pred HHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcC--CCEE--EcCC
Q 016596 266 LKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTG--VDVV--SLDW 308 (386)
Q Consensus 266 ~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g--~d~l--~~d~ 308 (386)
+.++++.+++. |..+.+.+.|... .++.+.+.| .+.+ +++.
T Consensus 159 l~~ll~~~~~~--g~~i~l~TNG~~~e~l~~L~~~g~~~~~l~isld~ 204 (342)
T 2yx0_A 159 MGDLVEEFHKR--GFTTFIVTNGTIPERLEEMIKEDKLPTQLYVSITA 204 (342)
T ss_dssp HHHHHHHHHHT--TCEEEEEECSCCHHHHHHHHHTTCCCSEEEEEECC
T ss_pred HHHHHHHHHHC--CCcEEEEcCCCcHHHHHHHHhcCCCCCEEEEEccC
Confidence 56677777776 5678889999875 578888876 6655 4554
No 344
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=34.17 E-value=2.3e+02 Score=24.53 Aligned_cols=98 Identities=13% Similarity=0.125 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCc--CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-----ch-HHHH
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWA--TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-----GL-LERL 296 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~--~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-----~~-l~~l 296 (386)
.+.+.+.++...+.|+..+.+.-... ...+++.+ +.+...++++.+.++++ |+.+.+|.+... .. ...+
T Consensus 83 ~~~~~~~i~~A~~lG~~~v~~~~g~~~~~~~~~~~~-~~~~~~l~~l~~~a~~~--Gv~l~lE~~~~~~~~~~~~~~~l~ 159 (286)
T 3dx5_A 83 IEKCEQLAILANWFKTNKIRTFAGQKGSADFSQQER-QEYVNRIRMICELFAQH--NMYVLLETHPNTLTDTLPSTLELL 159 (286)
T ss_dssp HHHHHHHHHHHHHHTCCEEEECSCSSCGGGSCHHHH-HHHHHHHHHHHHHHHHT--TCEEEEECCTTSTTSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEEcCCCCCcccCcHHHH-HHHHHHHHHHHHHHHHh--CCEEEEecCCCcCcCCHHHHHHHH
Confidence 33445556666778999987643221 13445555 56677889999999887 688889987432 11 2444
Q ss_pred HhcCCC--EEEcC------CCCCHHHHHHHhCCCeeE
Q 016596 297 ALTGVD--VVSLD------WTVDMAEGRRRLGPDVAV 325 (386)
Q Consensus 297 ~e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l 325 (386)
.+++-. .+.+| ...|+.+..+++++++..
T Consensus 160 ~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~ 196 (286)
T 3dx5_A 160 GEVDHPNLKINLDFLHIWESGADPVDSFQQLRPWIQH 196 (286)
T ss_dssp HHHCCTTEEEEEEHHHHHHTTCCHHHHHHHHGGGEEE
T ss_pred HhcCCCCeEEEeccccHhhcCCCHHHHHHHHHhHheE
Confidence 455533 23333 235888888888876543
No 345
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=34.16 E-value=2.2e+02 Score=24.34 Aligned_cols=155 Identities=14% Similarity=0.078 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-----c--hH-HH
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-----G--LL-ER 295 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-----~--~l-~~ 295 (386)
.+.+.+.++...+.|++.+.+.-.... -.+.+...+.+...++++.+.++++ |+.+.+|..+.. + .+ ..
T Consensus 83 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lEn~~~~~~~~~~~~~~~~l 160 (278)
T 1i60_A 83 ITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPY--GVKIALEFVGHPQCTVNTFEQAYEI 160 (278)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGG--TCEEEEECCCCTTBSSCSHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhc--CCEEEEEecCCccchhcCHHHHHHH
Confidence 344555666677889998877432221 2565666677788999999999887 688889887643 1 12 33
Q ss_pred HHhcCCC--EEEcC------CCCCHHHHHHHhCCCeeEE---ecCCc---------Cc-c-CCCHHHHHHHHHHHHHHcC
Q 016596 296 LALTGVD--VVSLD------WTVDMAEGRRRLGPDVAVQ---GNVDP---------GA-L-FGSKDFITNRINDTVRKAG 353 (386)
Q Consensus 296 l~e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l~---G~vd~---------~~-l-~gt~eev~~~v~~~i~~~~ 353 (386)
+.+++-. .+.+| ...|+.++.+.+++++..+ .+... .. + .|+.+ -+.+.+.++..+
T Consensus 161 ~~~~~~~~~g~~~D~~h~~~~g~d~~~~~~~~~~~i~~vHl~D~~~~~~g~~~~~~~~~~G~G~id--~~~~~~~L~~~g 238 (278)
T 1i60_A 161 VNTVNRDNVGLVLDSFHFHAMGSNIESLKQADGKKIFIYHIDDTEDFPIGFLTDEDRVWPGQGAID--LDAHLSALKEIG 238 (278)
T ss_dssp HHHHCCTTEEEEEEHHHHHHTTCCHHHHHTSCGGGEEEEEECEECCCCTTTCCGGGEESTTSSSSC--HHHHHHHHHHTT
T ss_pred HHHhCCCCeeEEEEeEEEeecCCCHHHHHhcCcceEEEEEecCCCCCCccchhhccCCCCCCCCCc--HHHHHHHHHHcC
Confidence 4445532 23333 2358888888877665431 11111 01 2 34322 344555666666
Q ss_pred -CCCeEEecCCC-CCCCCcHHHHHHHHHHHHh
Q 016596 354 -RWKHILNLGHG-IKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 354 -~~g~Ils~gc~-i~~~tp~Eni~a~~~a~~~ 383 (386)
.+.+++=.... .+...|.|.++.-++..++
T Consensus 239 y~g~~~lE~~~~~~~~~~~~~~~~~~~~~l~~ 270 (278)
T 1i60_A 239 FSDVVSVELFRPEYYKLTAEEAIQTAKKTTVD 270 (278)
T ss_dssp CCSEEEECCCCGGGGGSCHHHHHHHHHHHHHH
T ss_pred CCceEEEEecCcccccCCHHHHHHHHHHHHHH
Confidence 54444432211 1124577777777776665
No 346
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=33.87 E-value=1.9e+02 Score=26.73 Aligned_cols=130 Identities=18% Similarity=0.138 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHhCCceeEEeecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHH---------------
Q 016596 162 YVGKALTILREEVNNEAAVLGFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTT--------------- 226 (386)
Q Consensus 162 ~~~ea~~~l~~~~g~~~~v~~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~--------------- 226 (386)
...++++++.+ .|-+. |--.++.|.+.... ++.+ ..+..+|+.+.++++.+.+
T Consensus 71 ~~~~aA~~a~~-~G~D~-IeIn~gcP~~~~~~--d~~G--------~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~ 138 (350)
T 3b0p_A 71 SLAEAARIGEA-FGYDE-INLNLGCPSEKAQE--GGYG--------ACLLLDLARVREILKAMGEAVRVPVTVKMRLGLE 138 (350)
T ss_dssp HHHHHHHHHHH-TTCSE-EEEEECCCSHHHHH--TTCG--------GGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBT
T ss_pred HHHHHHHHHHH-cCCCE-EEECCcCCCCcCcC--CCcc--------hhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcC
Confidence 44556666654 44332 22234567653321 1111 1345788888888888765
Q ss_pred ------HHHHHHHHHHHhCCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc---hHHHH
Q 016596 227 ------SMAKYVQYQADNGAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG---LLERL 296 (386)
Q Consensus 227 ------~~~~~~~~~~e~G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~---~l~~l 296 (386)
...++++.+.++|+|.|.+..-... .++++..+ ...|+.-.++..+++..+++|+ -..|.+. ....+
T Consensus 139 ~~~~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~-~~~~~~~~~i~~ik~~~~~iPV--ianGgI~s~eda~~~ 215 (350)
T 3b0p_A 139 GKETYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANR-EIPPLRHDWVHRLKGDFPQLTF--VTNGGIRSLEEALFH 215 (350)
T ss_dssp TCCCHHHHHHHHHHHHHTTCCEEEEECSCBC-----------CCCCCHHHHHHHHHHCTTSEE--EEESSCCSHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHcCCCEEEEecCchhcccCccccc-CCCcccHHHHHHHHHhCCCCeE--EEECCcCCHHHHHHH
Confidence 2466778888999999988653322 34443211 1112222334444443223553 3556653 35555
Q ss_pred HhcCCCEEEcC
Q 016596 297 ALTGVDVVSLD 307 (386)
Q Consensus 297 ~e~g~d~l~~d 307 (386)
.+ |+|.+.+.
T Consensus 216 l~-GaD~V~iG 225 (350)
T 3b0p_A 216 LK-RVDGVMLG 225 (350)
T ss_dssp HT-TSSEEEEC
T ss_pred Hh-CCCEEEEC
Confidence 66 99988775
No 347
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=33.76 E-value=1.9e+02 Score=24.97 Aligned_cols=18 Identities=44% Similarity=0.468 Sum_probs=14.0
Q ss_pred HHHHHHHHHHhCCCEEEE
Q 016596 228 MAKYVQYQADNGAQAVQI 245 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i 245 (386)
..+.++++.++|+.+|.+
T Consensus 38 ~~~~A~a~~~~Ga~~i~~ 55 (229)
T 3q58_A 38 VAAMAQAAASAGAVAVRI 55 (229)
T ss_dssp HHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHCCCcEEEE
Confidence 446677788899999876
No 348
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=33.45 E-value=33 Score=31.15 Aligned_cols=135 Identities=12% Similarity=0.010 Sum_probs=72.3
Q ss_pred HHHHHhCCCEEEEecCCcCCCCHHHHHHh----h--HHHHHHHHHHHHhhCCCCcEEEEecCCc-chHHHHHhcCCCEEE
Q 016596 233 QYQADNGAQAVQIFDSWATELSPVDFEEF----S--LPYLKQIVDTVKQTHPDLSLILYASGSG-GLLERLALTGVDVVS 305 (386)
Q Consensus 233 ~~~~e~G~d~i~i~d~~~~~iSp~~f~ef----~--~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~~l~~l~e~g~d~l~ 305 (386)
+.+.++|+.++ +-=|.-+++. ..|++- - +--.-+++..+++. |..+ -.|=+. .--..+.++|+|++-
T Consensus 115 e~lk~~Gf~Gv-~N~ptvglid-G~fr~~LEE~gm~~~~eve~I~~A~~~--gL~T--i~~v~~~eeA~amA~agpDiI~ 188 (286)
T 2p10_A 115 RELKEIGFAGV-QNFPTVGLID-GLFRQNLEETGMSYAQEVEMIAEAHKL--DLLT--TPYVFSPEDAVAMAKAGADILV 188 (286)
T ss_dssp HHHHHHTCCEE-EECSCGGGCC-HHHHHHHHHTTCCHHHHHHHHHHHHHT--TCEE--CCEECSHHHHHHHHHHTCSEEE
T ss_pred HHHHHhCCceE-EECCCccccc-chhhhhHhhcCCCHHHHHHHHHHHHHC--CCeE--EEecCCHHHHHHHHHcCCCEEE
Confidence 35678999998 4445556676 455533 2 33344667788886 4332 223223 245788999999874
Q ss_pred cCCC------------CCHHH----------HHHHhCCC-eeEEecCCcCccCCCHHHHHHHHHHHHHHcC-CCCeEEec
Q 016596 306 LDWT------------VDMAE----------GRRRLGPD-VAVQGNVDPGALFGSKDFITNRINDTVRKAG-RWKHILNL 361 (386)
Q Consensus 306 ~d~~------------~dl~e----------~~~~~g~~-~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~-~~g~Ils~ 361 (386)
+... .++++ +.+...++ ++++|+= | -.||||++...+ ... -.||+.++
T Consensus 189 ~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gG-p---IstpeDv~~~l~----~t~G~~G~~gAS 260 (286)
T 2p10_A 189 CHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGG-P---IANPEDARFILD----SCQGCHGFYGAS 260 (286)
T ss_dssp EECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEEST-T---CCSHHHHHHHHH----HCTTCCEEEESH
T ss_pred ECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCC-C---CCCHHHHHHHHh----cCCCccEEEeeh
Confidence 3211 24443 22333333 3333210 1 247888766553 322 35888877
Q ss_pred CCCCCCCCcHHHHHHHHHHHHh
Q 016596 362 GHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 362 gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
+-.=.| +..-|+.++++.+.
T Consensus 261 sier~p--~e~ai~~~~~~fk~ 280 (286)
T 2p10_A 261 SMERLP--AEEAIRSQTLAFKA 280 (286)
T ss_dssp HHHHHH--HHHHHHHHHHHHHT
T ss_pred hhhcCC--HHHHHHHHHHHHHh
Confidence 643222 45555555555554
No 349
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=33.38 E-value=2.1e+02 Score=26.00 Aligned_cols=71 Identities=3% Similarity=-0.053 Sum_probs=39.0
Q ss_pred hCCceeEEeecCcH-----HHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEec
Q 016596 174 VNNEAAVLGFVGAP-----FTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFD 247 (386)
Q Consensus 174 ~g~~~~v~~~~~gP-----ft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d 247 (386)
.|-++||+.++..+ +..+..+.|-..-+.+.+.+...-++|+.++ +.-.++..+.++.+++.|++++.+.-
T Consensus 201 ~Gi~vPIi~GImPi~s~~~~~~~~~~~Gv~iP~~l~~~l~~~~dd~~~~~---~~Gi~~a~e~~~~L~~~gv~GiH~yt 276 (304)
T 3fst_A 201 AGIDVEIIPGILPVSNFKQAKKLADMTNVRIPAWMAQMFDGLDDDAETRK---LVGANIAMDMVKILSREGVKDFHFYT 276 (304)
T ss_dssp TTCCSCEECEECCCSCHHHHHHHHHHHTCCCCHHHHHHHTTCTTCHHHHH---HHHHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred cCCCCcEEEEecccCCHHHHHHHHHcCCCcCCHHHHHHHHhcCCCHHHHH---HHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 36578988776533 2223455553333333332222234566533 34445555666667788999998753
No 350
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=33.31 E-value=1.7e+02 Score=26.86 Aligned_cols=67 Identities=12% Similarity=0.093 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEE-ecCCc-c-h-HHHHHhcC
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILY-ASGSG-G-L-LERLALTG 300 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H-~cG~~-~-~-l~~l~e~g 300 (386)
.+-.++-++++.++|||.|++- . .-+++..++ +.+.+ .+|++.- +.+.+ . . .+.|.++|
T Consensus 188 l~~ai~Ra~Ay~eAGAd~i~~e-~---~~~~e~~~~--------i~~~l-----~~P~lan~~~~g~~~~~~~~eL~~lG 250 (318)
T 1zlp_A 188 LEEGIRRANLYKEAGADATFVE-A---PANVDELKE--------VSAKT-----KGLRIANMIEGGKTPLHTPEEFKEMG 250 (318)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEC-C---CCSHHHHHH--------HHHHS-----CSEEEEEECTTSSSCCCCHHHHHHHT
T ss_pred HHHHHHHHHHHHHcCCCEEEEc-C---CCCHHHHHH--------HHHhc-----CCCEEEEeccCCCCCCCCHHHHHHcC
Confidence 3556677888999999999862 2 235555544 44444 3576442 33433 3 3 79999999
Q ss_pred CCEEEcCC
Q 016596 301 VDVVSLDW 308 (386)
Q Consensus 301 ~d~l~~d~ 308 (386)
+..+++..
T Consensus 251 v~~v~~~~ 258 (318)
T 1zlp_A 251 FHLIAHSL 258 (318)
T ss_dssp CCEEEECS
T ss_pred CeEEEEch
Confidence 99988764
No 351
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=33.22 E-value=97 Score=27.33 Aligned_cols=80 Identities=11% Similarity=0.209 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHH
Q 016596 265 YLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNR 344 (386)
Q Consensus 265 ~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~ 344 (386)
.++.+++.+++. |+.+.+++.-+...++.-.++|++.+.+... ...++ .++.+-.++
T Consensus 115 ~l~~~i~~L~~~--GIrVSLFIDpd~~qi~aA~~~GA~~IELhTG-~Ya~a--------------------~~~~~~~~e 171 (243)
T 1m5w_A 115 KMRDACKRLADA--GIQVSLFIDADEEQIKAAAEVGAPFIEIHTG-CYADA--------------------KTDAEQAQE 171 (243)
T ss_dssp HHHHHHHHHHHT--TCEEEEEECSCHHHHHHHHHTTCSEEEEECH-HHHHC--------------------CSHHHHHHH
T ss_pred HHHHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHhCcCEEEEech-hhhcC--------------------CCchhHHHH
Confidence 456667777886 6899999998887889999999999977531 11111 123333455
Q ss_pred HHHHHHHcC---CCCeEEecCCCCCC
Q 016596 345 INDTVRKAG---RWKHILNLGHGIKV 367 (386)
Q Consensus 345 v~~~i~~~~---~~g~Ils~gc~i~~ 367 (386)
..++.+... .-|.-++.||++..
T Consensus 172 l~~i~~aa~~A~~lGL~VnAGHgL~y 197 (243)
T 1m5w_A 172 LARIAKAATFAASLGLKVNAGHGLTY 197 (243)
T ss_dssp HHHHHHHHHHHHHTTCEEEEESSCCT
T ss_pred HHHHHHHHHHHHHcCCEEecCCCCCH
Confidence 555554432 46889999999853
No 352
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=33.14 E-value=1.8e+02 Score=27.21 Aligned_cols=40 Identities=8% Similarity=0.059 Sum_probs=23.1
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHH
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVD 271 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~ 271 (386)
.++.++...++|+|++.+.-|.-.-.|++. +.-|++++.+
T Consensus 143 ai~la~~A~~~Gadavlvv~PyY~k~sq~g----l~~hf~~IA~ 182 (360)
T 4dpp_A 143 AIHATEQGFAVGMHAALHINPYYGKTSIEG----LIAHFQSVLH 182 (360)
T ss_dssp HHHHHHHHHHTTCSEEEEECCCSSCCCHHH----HHHHHHTTGG
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCCCHHH----HHHHHHHHHH
Confidence 345556677789998887666544445432 3334455544
No 353
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=33.11 E-value=68 Score=29.09 Aligned_cols=64 Identities=25% Similarity=0.379 Sum_probs=40.9
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLD 307 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d 307 (386)
+.++..+++|+|.|.+ |. ++|++.++. ++.+++.++. +.+-.-|+.+ .+..++++|+|++++.
T Consensus 204 eea~eA~~aGaD~I~L-Dn----~~~e~l~~a--------v~~l~~~~~~--v~ieASGGIt~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 204 EDALRAVEAGADIVML-DN----LSPEEVKDI--------SRRIKDINPN--VIVEVSGGITEENVSLYDFETVDVISSS 268 (285)
T ss_dssp HHHHHHHHTTCSEEEE-ES----CCHHHHHHH--------HHHHHHHCTT--SEEEEEECCCTTTGGGGCCTTCCEEEEG
T ss_pred HHHHHHHHcCCCEEEE-CC----CCHHHHHHH--------HHHhhccCCC--ceEEEECCCCHHHHHHHHHcCCCEEEEe
Confidence 4455567789998875 44 677665544 3444442222 2345557665 4889999999999875
Q ss_pred C
Q 016596 308 W 308 (386)
Q Consensus 308 ~ 308 (386)
.
T Consensus 269 s 269 (285)
T 1o4u_A 269 R 269 (285)
T ss_dssp G
T ss_pred H
Confidence 4
No 354
>3guw_A Uncharacterized protein AF_1765; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 3.20A {Archaeoglobus fulgidus dsm 4304}
Probab=32.83 E-value=81 Score=28.01 Aligned_cols=90 Identities=22% Similarity=0.308 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHHhhCCCCcEEEEecCC-----cc-hHHHHHhcCCC----E-EEcCCCCCHHHHHHHhCCC--eeEEecC
Q 016596 263 LPYLKQIVDTVKQTHPDLSLILYASGS-----GG-LLERLALTGVD----V-VSLDWTVDMAEGRRRLGPD--VAVQGNV 329 (386)
Q Consensus 263 ~P~~k~l~~~i~~~~~~~~~~~H~cG~-----~~-~l~~l~e~g~d----~-l~~d~~~dl~e~~~~~g~~--~~l~G~v 329 (386)
...+++.++.+++. +.|+++|+-.. .. .++.+.+.+.. + +++ +.+.+++.+... +.+. +
T Consensus 109 ~~~f~~ql~lA~e~--~lPv~iH~r~~~~~~a~~~~~~il~~~~~~~~~~vi~H~----~~~~a~~~l~~G~yis~~--~ 180 (261)
T 3guw_A 109 IEVLKSQLELAKRM--DVPCIIHTPRGNKLKATRKTLEILESLDFPADLAVIDHV----NFETLDMVLETEYWIGLT--V 180 (261)
T ss_dssp HHHHHHHHHHHHHH--TCCEEEECCSSSTTHHHHHHHHHHHHTTCCTTSEEEESC----CTTTHHHHHTSSSEEEEE--C
T ss_pred HHHHHHHHHHHHHh--CCeEEEEcCCCcccchHHHHHHHHHHcCCCCCCEEEEeC----CHHHHHHHHhCCEEEEec--C
Confidence 34666778888887 68999999653 22 46888877643 2 244 555566555432 3333 1
Q ss_pred CcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCC
Q 016596 330 DPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIK 366 (386)
Q Consensus 330 d~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~ 366 (386)
.|..+ |.+ .++++++...-.++++.+++...
T Consensus 181 ~pg~~--t~~----~~~~~v~~ipldrlLlETD~P~~ 211 (261)
T 3guw_A 181 QPGKL--SAE----DAARIVAEHGPERFMLNSDAGYR 211 (261)
T ss_dssp C-------------CCTTGGGGCC-CCEEEECCCCCC
T ss_pred CCCcc--cHH----HHHHHHHhCCcceEEEecCCCCC
Confidence 12222 111 12456666665689999998653
No 355
>2yyu_A Orotidine 5'-phosphate decarboxylase; TIM barrel, structural genomics, NPPSFA, national project on structural and functional analyses; HET: C5P; 2.20A {Geobacillus kaustophilus} PDB: 2yyt_A*
Probab=32.67 E-value=2.5e+02 Score=24.40 Aligned_cols=79 Identities=13% Similarity=0.067 Sum_probs=40.2
Q ss_pred hcCCCEEEcCCCCCHHHHHHHhCCC-eeEEecCCcCccCCCHHHHHH--HHHHHHHHcCCCCeEEecCCCCC-CCCcHHH
Q 016596 298 LTGVDVVSLDWTVDMAEGRRRLGPD-VAVQGNVDPGALFGSKDFITN--RINDTVRKAGRWKHILNLGHGIK-VGTPEEN 373 (386)
Q Consensus 298 e~g~d~l~~d~~~dl~e~~~~~g~~-~~l~G~vd~~~l~gt~eev~~--~v~~~i~~~~~~g~Ils~gc~i~-~~tp~En 373 (386)
+.|.+.+-... .+++++++.++.. +.+.|||.+.. ++.++.++ ..+++++.+.+ .+|.+. .|- ..-|.+.
T Consensus 154 ~~G~~g~V~~~-~ei~~lr~~~~~~~i~V~gGI~~~g--~~~~dq~rv~t~~~a~~aGad-~iVvGr--~I~~a~dp~~a 227 (246)
T 2yyu_A 154 ESGLDGVVCSA-NEAAFIKERCGASFLAVTPGIRFAD--DAAHDQVRVVTPRKARALGSD-YIVIGR--SLTRAADPLRT 227 (246)
T ss_dssp HHTCCEEECCH-HHHHHHHHHHCTTSEEEECCCCCCC---------CCCCHHHHHHHTCS-EEEECH--HHHTSSSHHHH
T ss_pred HhCCCEEEeCH-HHHHHHHHhcCCCCEEEeCCcCCCC--CCcccccccCCHHHHHHcCCC-EEEECH--hhcCCCCHHHH
Confidence 45666653333 3478888888744 68899998752 22222222 23444444322 333332 222 1226777
Q ss_pred HHHHHHHHH
Q 016596 374 VAHFFEVAK 382 (386)
Q Consensus 374 i~a~~~a~~ 382 (386)
++++.+..+
T Consensus 228 ~~~l~~~i~ 236 (246)
T 2yyu_A 228 YARLQHEWN 236 (246)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHHHHH
Confidence 777766543
No 356
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=32.62 E-value=2.3e+02 Score=23.97 Aligned_cols=82 Identities=10% Similarity=0.058 Sum_probs=47.7
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT 309 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~ 309 (386)
+.++..+++|+|++.... .++ .+.+..++. |.+.+ .-|.+..-+....+.|+|.+.+...
T Consensus 74 d~~~~A~~~GAd~v~~~~-----~d~------------~v~~~~~~~--g~~~i-~G~~t~~e~~~A~~~Gad~v~~fpa 133 (207)
T 2yw3_A 74 KEAEAALEAGAAFLVSPG-----LLE------------EVAALAQAR--GVPYL-PGVLTPTEVERALALGLSALKFFPA 133 (207)
T ss_dssp HHHHHHHHHTCSEEEESS-----CCH------------HHHHHHHHH--TCCEE-EEECSHHHHHHHHHTTCCEEEETTT
T ss_pred HHHHHHHHcCCCEEEcCC-----CCH------------HHHHHHHHh--CCCEE-ecCCCHHHHHHHHHCCCCEEEEecC
Confidence 556677889999886321 222 455666665 44533 3344433344556789998876432
Q ss_pred --C-C---HHHHHHHhCC-CeeEEecCCc
Q 016596 310 --V-D---MAEGRRRLGP-DVAVQGNVDP 331 (386)
Q Consensus 310 --~-d---l~e~~~~~g~-~~~l~G~vd~ 331 (386)
. . ++.++..+++ .++-.|||++
T Consensus 134 ~~~gG~~~lk~l~~~~~~ipvvaiGGI~~ 162 (207)
T 2yw3_A 134 EPFQGVRVLRAYAEVFPEVRFLPTGGIKE 162 (207)
T ss_dssp TTTTHHHHHHHHHHHCTTCEEEEBSSCCG
T ss_pred ccccCHHHHHHHHhhCCCCcEEEeCCCCH
Confidence 2 2 3455666642 3555899975
No 357
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=32.04 E-value=2.9e+02 Score=25.07 Aligned_cols=126 Identities=12% Similarity=-0.003 Sum_probs=59.0
Q ss_pred hCCCEEEEec-CCcCCCCHHHHH----HhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC--CC
Q 016596 238 NGAQAVQIFD-SWATELSPVDFE----EFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW--TV 310 (386)
Q Consensus 238 ~G~d~i~i~d-~~~~~iSp~~f~----ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~--~~ 310 (386)
.|..+++-.- .=+..=||.-|+ +-.++.++++. ++. |.+++--.. +...++.+.++ +|++.+.. ..
T Consensus 71 ~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~---~e~--GLpv~Tev~-D~~~v~~l~~~-vd~lkIgA~~~~ 143 (298)
T 3fs2_A 71 LGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLK---KEY--GFPVLTDIH-TEEQCAAVAPV-VDVLQIPAFLCR 143 (298)
T ss_dssp HTCCEEEECBCCCCC---------CCHHHHHHHHHHHH---HHH--CCCEEEECC-SHHHHHHHTTT-CSEEEECGGGTT
T ss_pred cCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHH---Hhc--CCeEEEEeC-CHHHHHHHHhh-CCEEEECccccC
Confidence 3555555321 111345666676 34444444444 444 567543221 22246888888 99998764 24
Q ss_pred CHHHHHHHhCCCeeEEecCCcCcc----CCCHHHHHHHHHHHHHHcCCCCeEEecCCCC--CCCCcHHHHHHHHH
Q 016596 311 DMAEGRRRLGPDVAVQGNVDPGAL----FGSKDFITNRINDTVRKAGRWKHILNLGHGI--KVGTPEENVAHFFE 379 (386)
Q Consensus 311 dl~e~~~~~g~~~~l~G~vd~~~l----~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i--~~~tp~Eni~a~~~ 379 (386)
+..-+++ +++. +. |..| ..|++|+...+..+.+.+ ....+|. -|++ +.+...-|++++-.
T Consensus 144 n~~LLr~-va~~-----gk-PVilK~Gms~t~~ei~~ave~i~~~G-n~~iiL~-erg~~y~~~~~~vdl~~i~~ 209 (298)
T 3fs2_A 144 QTDLLIA-AART-----GR-VVNVKKGQFLAPWDMKNVLAKITESG-NPNVLAT-ERGVSFGYNTLVSDMRALPI 209 (298)
T ss_dssp CHHHHHH-HHHT-----TS-EEEEECCTTCCGGGHHHHHHHHHTTT-CCCEEEE-ECCEECSSSCEECCTTHHHH
T ss_pred CHHHHHH-HHcc-----CC-cEEEeCCCCCCHHHHHHHHHHHHHcC-CCeEEEE-ECCCCCCCCCCccCHHHHHH
Confidence 5554443 2210 11 2223 358999988887776654 3345553 2443 33332234555443
No 358
>3nqb_A Adenine deaminase 2; PSI-II, structural genomics, protein structure initiative, N SGX research center for structural genomics, nysgxrc; 2.21A {Agrobacterium tumefaciens} PDB: 3t81_A 3t8l_A
Probab=32.00 E-value=1.2e+02 Score=30.42 Aligned_cols=89 Identities=13% Similarity=0.004 Sum_probs=52.2
Q ss_pred HHHHHHHHHHHhhCCCCcEEEEecCCcc-hHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcCccCCCHHHHH
Q 016596 264 PYLKQIVDTVKQTHPDLSLILYASGSGG-LLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPGALFGSKDFIT 342 (386)
Q Consensus 264 P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~ 342 (386)
+.+.+.++.+++. +.++..|+.+... .+..+.+.|+...+. ....+++.+.+...+.+.=. .......+.+
T Consensus 202 ~~l~~~l~~A~~~--g~pV~~Ha~~~~~~~L~~~~~aGv~~~H~--~~~~eea~e~l~~G~~i~i~---gs~~~~~~~l- 273 (608)
T 3nqb_A 202 PRMSGIVQAGLAA--EKLVCGHARGLKNADLNAFMAAGVSSDHE--LVSGEDLMAKLRAGLTIELR---GSHDHLLPEF- 273 (608)
T ss_dssp HHHHHHHHHHHHH--TCEEEECCTTCCHHHHHHHHHTTCCEECC--CCSHHHHHHHHHTTCEEEEE---SSSGGGHHHH-
T ss_pred HHHHHHHHHHHHc--CCEEEEcCCCCCHHHHHHHHHcCCCeeec--cCCHHHHHHHHHCCCEEEEe---ccccccHHHH-
Confidence 3456677777776 5799999877665 478888888877322 34557777766433333211 1112223333
Q ss_pred HHHHHHHH--HcCCCCeEEecCC
Q 016596 343 NRINDTVR--KAGRWKHILNLGH 363 (386)
Q Consensus 343 ~~v~~~i~--~~~~~g~Ils~gc 363 (386)
.+.++ ...+..+.|+++.
T Consensus 274 ---~~~i~~~~~~g~~v~lgTD~ 293 (608)
T 3nqb_A 274 ---VAALNTLGHLPQTVTLCTDD 293 (608)
T ss_dssp ---HHHHHHHTSCCTTEEEECBS
T ss_pred ---HHHHHhHhhcCceEEEecCC
Confidence 34444 2236688999885
No 359
>4inf_A Metal-dependent hydrolase; amidohydrolase, metal binding site, enzyme functi initiative, EFI; 1.48A {Novosphingobium aromaticivorans} PDB: 4ing_A*
Probab=31.84 E-value=89 Score=29.34 Aligned_cols=29 Identities=7% Similarity=0.110 Sum_probs=18.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCCEEEEe
Q 016596 218 HALLRKFTTSMAKYVQYQADNGAQAVQIF 246 (386)
Q Consensus 218 ~~ll~~~~~~~~~~~~~~~e~G~d~i~i~ 246 (386)
.++...+.+.-...++.+-+.|++.-.++
T Consensus 82 ~~~~~~~~D~~~~rl~~MD~~GId~~Vl~ 110 (373)
T 4inf_A 82 TQILERLLDLGERRIADMDATGIDKAILA 110 (373)
T ss_dssp HHHHHHHHCCSHHHHHHHHHTTCCEEEEE
T ss_pred cccCccccCchHHHHHHHHHCCCcEEEEc
Confidence 34555555555556677778899976655
No 360
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=31.75 E-value=2.8e+02 Score=24.75 Aligned_cols=120 Identities=11% Similarity=0.056 Sum_probs=67.3
Q ss_pred HHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC-----
Q 016596 234 YQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW----- 308 (386)
Q Consensus 234 ~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~----- 308 (386)
...++|||+|.+.- +.++++. ++++++.+++. |.-+++-+ -+..-++...++|++++.+.+
T Consensus 137 ea~~~GAD~VlLi~---a~L~~~~--------l~~l~~~a~~l--Gl~~lvev-h~~eEl~~A~~~ga~iIGinnr~l~t 202 (272)
T 3tsm_A 137 EARSWGADCILIIM---ASVDDDL--------AKELEDTAFAL--GMDALIEV-HDEAEMERALKLSSRLLGVNNRNLRS 202 (272)
T ss_dssp HHHHTTCSEEEEET---TTSCHHH--------HHHHHHHHHHT--TCEEEEEE-CSHHHHHHHTTSCCSEEEEECBCTTT
T ss_pred HHHHcCCCEEEEcc---cccCHHH--------HHHHHHHHHHc--CCeEEEEe-CCHHHHHHHHhcCCCEEEECCCCCcc
Confidence 45688999988633 2466554 45566667776 44433333 233336677789999997753
Q ss_pred -CCCHHH---HHHHhCCCe--eEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHH
Q 016596 309 -TVDMAE---GRRRLGPDV--AVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFE 379 (386)
Q Consensus 309 -~~dl~e---~~~~~g~~~--~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~ 379 (386)
.+|+.. +.+.++..+ +--||| .|+|++++. . ..|-.+++++.+-- -+.-|.+.++.++.
T Consensus 203 ~~~dl~~~~~L~~~ip~~~~vIaesGI------~t~edv~~l----~-~~Ga~gvLVG~alm-r~~d~~~~~~~l~~ 267 (272)
T 3tsm_A 203 FEVNLAVSERLAKMAPSDRLLVGESGI------FTHEDCLRL----E-KSGIGTFLIGESLM-RQHDVAAATRALLT 267 (272)
T ss_dssp CCBCTHHHHHHHHHSCTTSEEEEESSC------CSHHHHHHH----H-TTTCCEEEECHHHH-TSSCHHHHHHHHHH
T ss_pred CCCChHHHHHHHHhCCCCCcEEEECCC------CCHHHHHHH----H-HcCCCEEEEcHHHc-CCcCHHHHHHHHHh
Confidence 246554 444454322 123333 578877654 2 33434777765422 23345666666654
No 361
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=31.75 E-value=2.9e+02 Score=24.93 Aligned_cols=132 Identities=14% Similarity=0.053 Sum_probs=61.6
Q ss_pred HHhCCCEEEEecCC-cCCCCHHHHHHhh-HHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC--CCC
Q 016596 236 ADNGAQAVQIFDSW-ATELSPVDFEEFS-LPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW--TVD 311 (386)
Q Consensus 236 ~e~G~d~i~i~d~~-~~~iSp~~f~ef~-~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~--~~d 311 (386)
.+.|..+++-..=. +..=||.-|+-.. ..-++.+.+..++. |.+++-=.. +...++.+.++ +|++.+.. ..+
T Consensus 45 ~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~--Glp~~tev~-d~~~v~~l~~~-vd~lkIgA~~~~n 120 (288)
T 3tml_A 45 EKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQL--GLPVLTDVH-SIDEIEQVASV-VDVLQTPAFLCRQ 120 (288)
T ss_dssp HHHTCCEEEECBC--------------CHHHHHHHHHHHHHHH--CCCEEEECC-SGGGHHHHHHH-CSEEEECGGGTTC
T ss_pred HHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhc--CCeEEEEeC-CHHHHHHHHHh-CCEEEECcccccC
Confidence 34577777632100 1234555666322 22333333444454 566442221 22346888888 99998754 345
Q ss_pred HHHHHHHhCCCeeEEecCCcCcc----CCCHHHHHHHHHHHHHHcCC-----CCeEEecCCCC--CCCCcHHHHHHHHH
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGAL----FGSKDFITNRINDTVRKAGR-----WKHILNLGHGI--KVGTPEENVAHFFE 379 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l----~gt~eev~~~v~~~i~~~~~-----~g~Ils~gc~i--~~~tp~Eni~a~~~ 379 (386)
..-+++ .++. +. |..| ..|++|+...+..+.+.+.. ...+|. -|++ +.+...-|++++-.
T Consensus 121 ~~LLr~-~a~~-----gk-PVilK~G~~~t~~e~~~ave~i~~~Gn~~~~~~~~i~L~-erg~~y~~~~~~vdl~~i~~ 191 (288)
T 3tml_A 121 TDFIHA-CARS-----GK-PVNIKKGQFLAPHDMKNVIDKARDAAREAGLSEDRFMAC-ERGVSFGYNNLVSDMRSLAI 191 (288)
T ss_dssp HHHHHH-HHTS-----SS-CEEEECCTTCCTTHHHHHHHHHHHHHHTTTCCSCCEEEE-ECCEECSSSCEECCHHHHHH
T ss_pred HHHHHH-HHcc-----CC-cEEEeCCCCCCHHHHHHHHHHHHHcCCCccCCCCcEEEE-eCCCCCCCCcCcCCHHHHHH
Confidence 554444 3321 11 3333 35899999999988876531 345553 3454 22221125666543
No 362
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=31.15 E-value=31 Score=32.50 Aligned_cols=46 Identities=9% Similarity=0.194 Sum_probs=31.3
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCeEEecCCC-CCCCCcHHHHHHHHH
Q 016596 334 LFGSKDFITNRINDTVRKAGRWKHILNLGHG-IKVGTPEENVAHFFE 379 (386)
Q Consensus 334 l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~-i~~~tp~Eni~a~~~ 379 (386)
+.||||+|.+++++..+..|-.+++|.+..+ ++.+...+.++.+.+
T Consensus 307 lvGtpe~va~~l~~~~~~~G~d~~~l~~~~~~~~~~~~~~~l~~~a~ 353 (376)
T 2i7g_A 307 FLGEPELVAEKIIKAHGVFKNDRFLLQMAIGLMPHDQIMRGIELYGT 353 (376)
T ss_dssp EEESHHHHHHHHHHHHHHHCCSEEEEECCCTTCCHHHHHHHHHHHHH
T ss_pred EEeCHHHHHHHHHHHHHhcCCCeEEEEeCCCCCCHHHHHHHHHHHHH
Confidence 4799999999999998888745888876542 333223444554443
No 363
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=31.02 E-value=68 Score=29.88 Aligned_cols=70 Identities=21% Similarity=0.329 Sum_probs=40.9
Q ss_pred HHHHHHhCCCEEEEecC--CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEE
Q 016596 232 VQYQADNGAQAVQIFDS--WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVV 304 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~--~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l 304 (386)
++.+++.|++.+-+.-+ ..+...|.....+-...++++++.++++ |.++.+|+.+.. -+....+.|++.+
T Consensus 178 v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~--g~~v~~H~~~~~-~i~~~l~~g~~~i 249 (423)
T 3feq_A 178 VREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAA--NTYVMAHAYTGR-AIARAVRCGVRTI 249 (423)
T ss_dssp HHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHT--TCCEEEEEEEHH-HHHHHHHHTCCEE
T ss_pred HHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHC--CCeEEEEeCChH-HHHHHHHcCCCEE
Confidence 34466788887765432 1111111111112223466788888887 689999998543 3566667898876
No 364
>2xn2_A Alpha-galactosidase; hydrolase, glycosidase; HET: SME GLA IMD; 1.58A {Lactobacillus acidophilus ncfm} PDB: 2xn1_A* 2xn0_A*
Probab=30.97 E-value=1e+02 Score=31.86 Aligned_cols=51 Identities=20% Similarity=0.313 Sum_probs=33.8
Q ss_pred HHHHHHHHhCCCEEEEecCCc-----------C-CCCHHHHHHhhHHH-HHHHHHHHHhhCCCCcEEEEec
Q 016596 230 KYVQYQADNGAQAVQIFDSWA-----------T-ELSPVDFEEFSLPY-LKQIVDTVKQTHPDLSLILYAS 287 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~-----------~-~iSp~~f~ef~~P~-~k~l~~~i~~~~~~~~~~~H~c 287 (386)
++++.+.+.|.+.+.+-|.|- . ..+|+. +|- ++.+++.+|++ |..+.++..
T Consensus 354 ~~ad~~~~~G~~~~viDDGW~~~r~~~~~~~Gd~~~d~~k-----FP~Glk~lv~~ih~~--Glk~GlW~~ 417 (732)
T 2xn2_A 354 TIVDKAKKLGLEMFVLDDGWFGHRDDDNSSLGDWKVYKKK-----FPNGLGHFADYVHEQ--GLKFGLWFE 417 (732)
T ss_dssp HHHHHHHHTTCCEEEECSSSBTTCSSTTSCTTCCSBCTTT-----CTTCHHHHHHHHHHT--TCEEEEEEC
T ss_pred HHHHHHHHcCCcEEEEcCcccccCCCCccccCceeeCchh-----cCccHHHHHHHHHHc--CCEEEEEeC
Confidence 344445778999988765553 1 223322 365 89999999998 567777654
No 365
>2xz9_A Phosphoenolpyruvate-protein kinase (PTS system EI component in bacteria); thermophilic, PEP-utilising enzyme, transferase; 1.68A {Thermoanaerobacter tengcongensis} PDB: 2bg5_A 2xz7_A*
Probab=30.82 E-value=1.2e+02 Score=27.90 Aligned_cols=85 Identities=18% Similarity=0.172 Sum_probs=54.8
Q ss_pred hhHHHHHHHHHHHHhhCCCCcEEEEecCCcc----hHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCC---cCc
Q 016596 261 FSLPYLKQIVDTVKQTHPDLSLILYASGSGG----LLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVD---PGA 333 (386)
Q Consensus 261 f~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~----~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd---~~~ 333 (386)
-+....++++++.++. |+++ -+||... ....+.++|++.+++... .+..++..+.. ..+ .... ...
T Consensus 231 ~v~~ai~~vv~aar~a--G~~v--gvcge~~~dp~~~~~l~~lG~~~~si~p~-~i~~~~~~~~~-~~~-~~~~~~~~~~ 303 (324)
T 2xz9_A 231 AILRLVKMVIDAAHKE--GKFA--AMCGEMAGDPLAAVILLGLGLDEFSMSAT-SIPEIKNIIRN-VEY-EKAKEIAEKA 303 (324)
T ss_dssp HHHHHHHHHHHHHHHT--TCEE--EECSGGGGCHHHHHHHHHHTCCEEEECGG-GHHHHHHHHTT-SCH-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH--CCce--eecCccCCCHHHHHHHHHCCCCEEEEChh-HHHHHHHHHHH-cCH-HHHHHHHHHH
Confidence 3555677888888887 5664 5688753 357888999999887642 45556666543 111 0010 112
Q ss_pred c-CCCHHHHHHHHHHHHHHc
Q 016596 334 L-FGSKDFITNRINDTVRKA 352 (386)
Q Consensus 334 l-~gt~eev~~~v~~~i~~~ 352 (386)
| ..|+++|++.+++.+++.
T Consensus 304 l~~~~~~~v~~~~~~~~~~~ 323 (324)
T 2xz9_A 304 LNMSEAREIEKMMKDVIKDI 323 (324)
T ss_dssp HTCSCHHHHHHHHHHHHHHC
T ss_pred HcCCCHHHHHHHHHHHHHhc
Confidence 4 689999999998877653
No 366
>3sgv_B Undecaprenyl pyrophosphate synthase; alpha/beta, transferase; HET: 2BJ; 1.61A {Escherichia coli} PDB: 1jp3_A* 1v7u_A* 1x06_A* 1x07_A* 2e98_A* 2e99_A* 2e9a_A* 2e9c_A* 2e9d_A* 1ueh_A 3sgt_B* 3qas_B* 3sgx_A* 3sh0_B* 3th8_A* 4h2j_A* 4h2m_A* 4h2o_B* 4h38_A* 4h3a_A* ...
Probab=30.71 E-value=2.8e+02 Score=24.51 Aligned_cols=107 Identities=18% Similarity=0.244 Sum_probs=53.0
Q ss_pred HHHHHHHHHHHHhCCCEEEEec-CCcCCCCHH----HHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchH-HHHHhc
Q 016596 226 TSMAKYVQYQADNGAQAVQIFD-SWATELSPV----DFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLL-ERLALT 299 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d-~~~~~iSp~----~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l-~~l~e~ 299 (386)
+.+.+.++.+.+.|+..+.+.- +.-++=.|+ ..-+++..++++.++.++++ + +-++.-|+...| +.+.+.
T Consensus 48 ~~l~~i~~~c~~lGI~~lTlYaFStENwkRp~~EV~~Lm~L~~~~l~~~~~~l~~~--~--vrvr~iGd~~~Lp~~l~~~ 123 (253)
T 3sgv_B 48 KSVRRAVSFAANNGIEALTLYAFSSENWNRPAQEVSALMELFVWALDSEVKSLHRH--N--VRLRIIGDTSRFNSRLQER 123 (253)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECC-----------CHHHHHHHHTTHHHHHHHHHHT--T--CEEEEESCGGGSCHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEEEchhccCCCHHHHHHHHHHHHHHHHHHHHHHHHC--C--eEEEEEeehhhCCHHHHHH
Confidence 3334455567788999887653 111111111 11134455566667777775 3 467888987644 333321
Q ss_pred CCCEEEcCCCCCHHHHHHHhCCCeeEEecCCcC-cc-CCCHHHHHHHHHHHHHHc
Q 016596 300 GVDVVSLDWTVDMAEGRRRLGPDVAVQGNVDPG-AL-FGSKDFITNRINDTVRKA 352 (386)
Q Consensus 300 g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd~~-~l-~gt~eev~~~v~~~i~~~ 352 (386)
+.++.+...+. .++.-. .+ +|+.+||.+.++++.+..
T Consensus 124 ------------i~~ae~~T~~n----~~~~lnia~~YggR~EI~~Avr~ia~~v 162 (253)
T 3sgv_B 124 ------------IRKSEALTAGN----TGLTLNIAANYGGRWDIVQGVRQLAEKV 162 (253)
T ss_dssp ------------HHHHHHHHTTC----CSCEEEEESSCCHHHHHHHHHHHHHHHH
T ss_pred ------------HHHHHHHhccC----CCeEEEEEecCCCHHHHHHHHHHHHHHH
Confidence 23333333221 111111 13 577777777777766543
No 367
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=30.46 E-value=1.5e+02 Score=27.01 Aligned_cols=30 Identities=10% Similarity=0.032 Sum_probs=21.4
Q ss_pred CCcEEEEecCCcc------hHHHHHhcCCCEEEcCC
Q 016596 279 DLSLILYASGSGG------LLERLALTGVDVVSLDW 308 (386)
Q Consensus 279 ~~~~~~H~cG~~~------~l~~l~e~g~d~l~~d~ 308 (386)
+.|+++-+.++++ ....+.+.|+|.+.+..
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 5788888776643 13566788999998754
No 368
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=30.44 E-value=3.1e+02 Score=24.86 Aligned_cols=78 Identities=8% Similarity=0.007 Sum_probs=40.1
Q ss_pred HHHHHHHHHhCCCEEEEecCCcCC---CCHHHHHH-------hhHHHHHHHHHHHHhhC-CCCcEEEEecCCcc---hHH
Q 016596 229 AKYVQYQADNGAQAVQIFDSWATE---LSPVDFEE-------FSLPYLKQIVDTVKQTH-PDLSLILYASGSGG---LLE 294 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~d~~~~~---iSp~~f~e-------f~~P~~k~l~~~i~~~~-~~~~~~~H~cG~~~---~l~ 294 (386)
.+.++.+.++|+|+|.+.....+. -.+....+ -.+|+..+++..+++.- +++|+ -.+|.+. ...
T Consensus 228 ~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipV--i~~GGI~~~~da~ 305 (336)
T 1f76_A 228 IQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPI--IGVGGIDSVIAAR 305 (336)
T ss_dssp HHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCE--EEESSCCSHHHHH
T ss_pred HHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCE--EEECCCCCHHHHH
Confidence 555777888999999876532110 00000000 11334444444444421 13563 3456543 255
Q ss_pred HHHhcCCCEEEcCC
Q 016596 295 RLALTGVDVVSLDW 308 (386)
Q Consensus 295 ~l~e~g~d~l~~d~ 308 (386)
.+.+.|+|.+.+..
T Consensus 306 ~~l~~GAd~V~igr 319 (336)
T 1f76_A 306 EKIAAGASLVQIYS 319 (336)
T ss_dssp HHHHHTCSEEEESH
T ss_pred HHHHCCCCEEEeeH
Confidence 55668999987753
No 369
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=30.09 E-value=3.2e+02 Score=24.92 Aligned_cols=68 Identities=22% Similarity=0.314 Sum_probs=38.9
Q ss_pred HHHHHHHHhCCCEEEEe--cC-Cc-CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-c-----hHHHHHhc
Q 016596 230 KYVQYQADNGAQAVQIF--DS-WA-TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-G-----LLERLALT 299 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~--d~-~~-~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~-----~l~~l~e~ 299 (386)
+-+.+..++||.++.+. |+ -+ .-.+|+.|+++ ++.+++.. +. ++.-+.|.. . .+..+.++
T Consensus 36 ~~A~~~~~AGAaivHlHvRdp~dG~ps~d~~~~~e~--------~~~IR~~~-d~-iI~~TTgg~~~~~~eerla~~~~~ 105 (311)
T 3e49_A 36 QASIGAAEAGAAVIHLHARDPRDGRPTQDPAAFAEF--------LPRIKSNT-DA-VINLTTGGSPHMTVEERLRPATHY 105 (311)
T ss_dssp HHHHHHHHHTCSEEEECEECTTTCCEECCHHHHTTH--------HHHHHHHC-CC-EEEECSCSCTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCcEEEEeecCCCCCCcCCCHHHHHHH--------HHHHHHhC-Cc-EEEECCCCCCCCCHHHHHHHHHhc
Confidence 34445779999999886 43 23 26788888774 55666554 33 333344432 2 23444455
Q ss_pred CCCEEEcC
Q 016596 300 GVDVVSLD 307 (386)
Q Consensus 300 g~d~l~~d 307 (386)
..+..+++
T Consensus 106 ~Pe~aSln 113 (311)
T 3e49_A 106 MPELASLN 113 (311)
T ss_dssp CCSEEEEE
T ss_pred CCCeeeec
Confidence 56655544
No 370
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=29.91 E-value=2.4e+02 Score=25.46 Aligned_cols=80 Identities=6% Similarity=0.008 Sum_probs=46.3
Q ss_pred HHHHHHHHHHhCCCEEEEecCCc--CCCCHHHH--HHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhc--
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWA--TELSPVDF--EEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALT-- 299 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~--~~iSp~~f--~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~-- 299 (386)
..+.++++.++|+|.|.+.-++. ++|.-+.- .+-...+.+++++++++..+++.++.|--|=.+ ....+.+.
T Consensus 172 ~~eeA~amA~agpDiI~~h~glT~gglIG~~~avs~~~~~e~i~~i~~a~~~vnpdvivLc~gGpIstpeDv~~~l~~t~ 251 (286)
T 2p10_A 172 SPEDAVAMAKAGADILVCHMGLTTGGAIGARSGKSMDDCVSLINECIEAARTIRDDIIILSHGGPIANPEDARFILDSCQ 251 (286)
T ss_dssp SHHHHHHHHHHTCSEEEEECSCC---------CCCHHHHHHHHHHHHHHHHHHCSCCEEEEESTTCCSHHHHHHHHHHCT
T ss_pred CHHHHHHHHHcCCCEEEECCCCCCCCcccCCCcccHHHhHHHHHHHHHHHHHhCCCcEEEecCCCCCCHHHHHHHHhcCC
Confidence 44667788899999998765542 23332210 122345778889999987655444334323222 36667776
Q ss_pred CCCEEEcC
Q 016596 300 GVDVVSLD 307 (386)
Q Consensus 300 g~d~l~~d 307 (386)
|++.+...
T Consensus 252 G~~G~~gA 259 (286)
T 2p10_A 252 GCHGFYGA 259 (286)
T ss_dssp TCCEEEES
T ss_pred CccEEEee
Confidence 78887543
No 371
>3ls9_A Triazine hydrolase; atrazine chlorohydrolase TRZN; 1.40A {Arthrobacter aurescens} PDB: 3lsc_A* 3lsb_A*
Probab=29.89 E-value=1.3e+02 Score=28.22 Aligned_cols=57 Identities=11% Similarity=-0.041 Sum_probs=32.9
Q ss_pred CCcCccCCCHHHHHHHHHHHHHHcCC----CCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 329 VDPGALFGSKDFITNRINDTVRKAGR----WKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 329 vd~~~l~gt~eev~~~v~~~i~~~~~----~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
.+|..+..+.++..++++++++...+ +...++.+-.-++..++|.++++++.++++|
T Consensus 172 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~a~~~g 232 (456)
T 3ls9_A 172 FCDDLFVEPVDRVVQHCLGLIDQYHEPEPFGMVRIALGPCGVPYDKPELFEAFAQMAADYD 232 (456)
T ss_dssp SSCGGGCCCHHHHHHHHHHHHHHHCCCSTTCSEEEEECCCCTTTSCHHHHHHHHHHHHHHT
T ss_pred CCccccccCHHHHHHHHHHHHHHhhCcCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCC
Confidence 34444445666666667777766432 2222333322345567777888888888776
No 372
>1tvl_A Protein YTNJ; beta-alpha barrel, structural genomics, PSI, protein structu initiative, NEW YORK SGX research center for structural GEN nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.1.16.4 PDB: 1yw1_A*
Probab=29.34 E-value=41 Score=32.71 Aligned_cols=41 Identities=12% Similarity=0.140 Sum_probs=30.9
Q ss_pred ccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHH
Q 016596 333 ALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEV 380 (386)
Q Consensus 333 ~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a 380 (386)
.+.||||+|.+++++..+..+-.+|+|.+.. ++.+..+.+.
T Consensus 364 ~ivGTpe~Vad~L~~~~~~~g~D~f~l~~~~-------~~~le~fa~~ 404 (454)
T 1tvl_A 364 LFIGTPERVASLIETWFNAEAADGFIVGSDI-------PGTLDAFVEK 404 (454)
T ss_dssp SSEECHHHHHHHHHHHHHTTSCSEEEECCCS-------TTHHHHHHHH
T ss_pred eEEECHHHHHHHHHHHHHhcCCCEEEEcCCC-------hHHHHHHHHH
Confidence 3479999999999999998774579997642 4566655553
No 373
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=29.20 E-value=1.2e+02 Score=26.27 Aligned_cols=81 Identities=17% Similarity=0.183 Sum_probs=45.2
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCC------cEEEEecCCcchHHHHHhcCCCEE
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDL------SLILYASGSGGLLERLALTGVDVV 304 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~------~~~~H~cG~~~~l~~l~e~g~d~l 304 (386)
.++..+++|+++|.. |. ++| ++++.++++ ++ + ++=-|...+-+..-.++|+|.+
T Consensus 77 ~a~~ai~AGA~fivs--P~---~~~------------evi~~~~~~--~v~~~~~~~-~~PG~~TptE~~~A~~~Gad~v 136 (217)
T 3lab_A 77 DFQKAIDAGAQFIVS--PG---LTP------------ELIEKAKQV--KLDGQWQGV-FLPGVATASEVMIAAQAGITQL 136 (217)
T ss_dssp HHHHHHHHTCSEEEE--SS---CCH------------HHHHHHHHH--HHHCSCCCE-EEEEECSHHHHHHHHHTTCCEE
T ss_pred HHHHHHHcCCCEEEe--CC---CcH------------HHHHHHHHc--CCCccCCCe-EeCCCCCHHHHHHHHHcCCCEE
Confidence 345677899998753 22 333 455556654 33 4 2333333333555678999999
Q ss_pred EcCCC--C-CHH---HHHHHhCC-CeeEEecCCc
Q 016596 305 SLDWT--V-DMA---EGRRRLGP-DVAVQGNVDP 331 (386)
Q Consensus 305 ~~d~~--~-dl~---e~~~~~g~-~~~l~G~vd~ 331 (386)
.+... . .+. .++..+++ +++-.|||++
T Consensus 137 K~FPa~~~gG~~~lkal~~p~p~i~~~ptGGI~~ 170 (217)
T 3lab_A 137 KCFPASAIGGAKLLKAWSGPFPDIQFCPTGGISK 170 (217)
T ss_dssp EETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCT
T ss_pred EECccccccCHHHHHHHHhhhcCceEEEeCCCCH
Confidence 76543 2 233 33444543 3555788876
No 374
>2jwk_A Protein TOLR; periplasmic domain, membrane, inner membrane, protein transport, transmembrane, transport, membrane protein; NMR {Haemophilus influenzae} PDB: 2jwl_A
Probab=29.19 E-value=1.3e+02 Score=20.28 Aligned_cols=46 Identities=11% Similarity=0.128 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhcC
Q 016596 337 SKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIRY 386 (386)
Q Consensus 337 t~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg~ 386 (386)
+.+++...+++.........+++..+ .+++.+.+..+++++++-|.
T Consensus 28 ~~~~L~~~l~~~~~~~~~~~V~I~aD----~~~~y~~vv~vmd~l~~aG~ 73 (74)
T 2jwk_A 28 TEEMVTQLSRQEFDKDNNTLFLVGGA----KEVPYEEVIKALNLLHLAGI 73 (74)
T ss_dssp CHHHHHHHHHHHHHHCTTCCEEEEEC----TTSCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHhhCCCceEEEEcC----CCCCHHHHHHHHHHHHHcCC
Confidence 56888888888777655567888776 45678999999999998774
No 375
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=29.11 E-value=3.2e+02 Score=24.61 Aligned_cols=86 Identities=13% Similarity=0.073 Sum_probs=46.0
Q ss_pred hhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCC--CCCHHHHHH--HhCCCeeEEecCCcCccCC
Q 016596 261 FSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDW--TVDMAEGRR--RLGPDVAVQGNVDPGALFG 336 (386)
Q Consensus 261 f~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~--~~dl~e~~~--~~g~~~~l~G~vd~~~l~g 336 (386)
-.+..++++. ++. |.+++-=. =+...++.+.++ +|++.+.. ..+..-+++ .++.-+.+-=|. ..
T Consensus 78 ~GL~~L~~~~---~e~--Glp~~Tev-~d~~~v~~l~~~-vd~lqIgA~~~~n~~LLr~va~~gkPVilK~G~-----~~ 145 (285)
T 3sz8_A 78 EGLKIFAEVK---ARF--GVPVITDV-HEAEQAAPVAEI-ADVLQVPAFLARQTDLVVAIAKAGKPVNVKKPQ-----FM 145 (285)
T ss_dssp HHHHHHHHHH---HHH--CCCEEEEC-CSGGGHHHHHTT-CSEEEECGGGTTCHHHHHHHHHTSSCEEEECCT-----TS
T ss_pred HHHHHHHHHH---Hhc--CCeEEEEe-CCHHHHHHHHHh-CCEEEECccccCCHHHHHHHHccCCcEEEeCCC-----CC
Confidence 3444444444 444 56644222 123357888898 99998754 245543333 233212221111 35
Q ss_pred CHHHHHHHHHHHHHHcCCCCeEE
Q 016596 337 SKDFITNRINDTVRKAGRWKHIL 359 (386)
Q Consensus 337 t~eev~~~v~~~i~~~~~~g~Il 359 (386)
|++|+...+..+.+.+ ....+|
T Consensus 146 t~~ei~~ave~i~~~G-n~~i~L 167 (285)
T 3sz8_A 146 SPTQLKHVVSKCGEVG-NDRVML 167 (285)
T ss_dssp CGGGTHHHHHHHHHTT-CCCEEE
T ss_pred CHHHHHHHHHHHHHcC-CCcEEE
Confidence 8899988888776654 334555
No 376
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=29.07 E-value=1.6e+02 Score=26.89 Aligned_cols=73 Identities=7% Similarity=-0.082 Sum_probs=45.8
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCC-C---CCCCcHHHHHHHHHHHHhhc
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHG-I---KVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~-i---~~~tp~Eni~a~~~a~~~yg 385 (386)
+.++.+.++++..-+|.+++.. ...+++..++++++++..+=.|+-++++.. . ......+.+..+++++.++|
T Consensus 96 ~~~~~~~~p~rf~~~~~~p~~~-~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~~ 172 (350)
T 2gwg_A 96 CYRVSQLFPDNFIGAAMLPQSP-GVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVELE 172 (350)
T ss_dssp HHHHHHHSTTTEEEEEECCCCT-TSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHHT
T ss_pred HHHHHHhCCCcEEEEEeCCCCC-CCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHcC
Confidence 5567777888877788887532 123456667778888766634666766421 0 01233456788888888876
No 377
>3lg3_A Isocitrate lyase; conserved, CD, proteomics evidence (cytopl periplasmic), drug target functions; 1.40A {Yersinia pestis} SCOP: c.1.12.7 PDB: 1igw_A
Probab=28.98 E-value=3.9e+02 Score=25.62 Aligned_cols=141 Identities=14% Similarity=0.015 Sum_probs=79.1
Q ss_pred HHHHHHHhCCCEEEEecCCc---------C--CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC-----------
Q 016596 231 YVQYQADNGAQAVQIFDSWA---------T--ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG----------- 288 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~---------~--~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG----------- 288 (386)
.++.++++|+-+|.|-|... + +++.+.+-+-+ +...++....+.+..++--++-
T Consensus 172 tv~~~~~aGaaGi~IEDq~~~~KkCGh~~gk~lv~~~e~~~rI----~Aa~~A~~~~~~d~~IiARTDa~aa~l~~s~~d 247 (435)
T 3lg3_A 172 LMKAMIEAGAAGVHFEDQLAAVKKCGHMGGKVLVPTQEAIQKL----VAARLAADVLGVPTLLIARTDADAADLLTSDCD 247 (435)
T ss_dssp HHHHHHHHTCSEEEEESBCGGGCBCSTTCBCEECCHHHHHHHH----HHHHHHHHHHTCCCEEEEEECTTTCCEESCCCC
T ss_pred HHHHHHHcCCEEEEEecCCCCccccCCCCCCeecCHHHHHHHH----HHHHHHHHhcCCCeEEEEEcCCccccccccccc
Confidence 34567899999999988542 1 67776664422 2333333333323223333331
Q ss_pred ---------------------Ccc----hHHHHHhcCCCEEEcCCC-CCHHHHHHH-------hCCCeeEEecCCcCc--
Q 016596 289 ---------------------SGG----LLERLALTGVDVVSLDWT-VDMAEGRRR-------LGPDVAVQGNVDPGA-- 333 (386)
Q Consensus 289 ---------------------~~~----~l~~l~e~g~d~l~~d~~-~dl~e~~~~-------~g~~~~l~G~vd~~~-- 333 (386)
... ....+.+ |+|++-++.. .|++++++. ++.+ .+.+|..|..
T Consensus 248 ~rD~~fi~G~r~~eG~y~~~~gld~AI~Ra~AY~~-GAD~if~E~~~~~~~ei~~f~~~v~~~~P~~-~La~~~sPsfnw 325 (435)
T 3lg3_A 248 PYDREFITGDRTAEGFFRTRAGIEQAISRGLAYAP-YADLVWCETSTPDLALAKRFADAVHAQFPGK-LLAYNCSPSFNW 325 (435)
T ss_dssp GGGGGGEEEEECTTCCEEECCSHHHHHHHHHHHGG-GCSEEEECCSSCCHHHHHHHHHHHHHHSTTC-EEEEECCSSSCH
T ss_pred cccchhhcccccccccccccCCHHHHHHHHHHHHc-cCCEEEecCCCCCHHHHHHHHHHhccccCCe-EEEeCCCCCccc
Confidence 111 1234567 9999988654 577655432 4444 4556666643
Q ss_pred c-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhh
Q 016596 334 L-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 334 l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
- .-++++++....++-+ + |-.+++-+ ...--....+|.+++++|
T Consensus 326 ~~~~~d~~~~~f~~eLa~-l-G~~~v~~~-----la~~raa~~a~~~~a~~~ 370 (435)
T 3lg3_A 326 KKNLTDQQIASFQDELSA-M-GYKYQFIT-----LAGIHSMWFNMFDLAHAY 370 (435)
T ss_dssp HHHSCHHHHHHHHHHHHH-T-TEEEEEET-----THHHHHHHHHHHHHHHHH
T ss_pred cccCCHHHHHHHHHHHHH-c-CCcEEEeC-----cHHHHHHHHHHHHHHHHH
Confidence 1 4678888887777655 3 22334432 223355666777777765
No 378
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=28.81 E-value=1.3e+02 Score=27.78 Aligned_cols=100 Identities=17% Similarity=0.187 Sum_probs=57.5
Q ss_pred HhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH--HhcCCCEEEc-----C
Q 016596 237 DNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL--ALTGVDVVSL-----D 307 (386)
Q Consensus 237 e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l--~e~g~d~l~~-----d 307 (386)
++|++.|.+.|..+. +.|....++ ++.+++.. +.++-+|++-+... + ..+ .+.|++.+.. .
T Consensus 154 ~~G~~~i~l~Dt~G~-~~P~~~~~l--------v~~l~~~~-~~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG 223 (320)
T 3dxi_A 154 DKIADLFCMVDSFGG-ITPKEVKNL--------LKEVRKYT-HVPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMG 223 (320)
T ss_dssp TTTCSEEEEECTTSC-CCHHHHHHH--------HHHHHHHC-CSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCS
T ss_pred hCCCCEEEECcccCC-CCHHHHHHH--------HHHHHHhC-CCeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccC
Confidence 679999999887765 577765554 44455443 46889999877652 3 333 4679998853 2
Q ss_pred CC---CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHc
Q 016596 308 WT---VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKA 352 (386)
Q Consensus 308 ~~---~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~ 352 (386)
.. .+++++...+..+ +--++|.. .-+++.+...++....
T Consensus 224 ~~~GN~~~E~lv~~L~~~--~~~~~dl~----~l~~~~~~~~~~~~~~ 265 (320)
T 3dxi_A 224 RGAGNLKMELLLTYLNKH--HGLNVDFN----VLGNIITTFTPLLEKY 265 (320)
T ss_dssp STTCBCBHHHHHHHHHHH--SCCCCCHH----HHHHHHHHHHHHHHHH
T ss_pred CcccchhHHHHHHHHHhc--cCCCcCHH----HHHHHHHHHHHHHHhc
Confidence 22 4566555444221 00123322 2345566666665543
No 379
>2hbv_A 2-amino-3-carboxymuconate 6-semialdehyde decarbox; ACMSD, TIM-barrel, decarboxylase, metaloenzyme, lyase; 1.65A {Pseudomonas fluorescens} SCOP: c.1.9.15 PDB: 2hbx_A
Probab=28.77 E-value=1.3e+02 Score=27.15 Aligned_cols=67 Identities=13% Similarity=0.087 Sum_probs=41.9
Q ss_pred HHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 313 AEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 313 ~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
.++.+..+++..-.+.+++. .+++..+++++++ ..+=.|+-+.+... ......+.+..+++++.++|
T Consensus 105 ~~~~~~~p~r~~~~~~l~~~----~~~~a~~el~~~~-~~g~~Gv~l~~~~~-~~~l~d~~~~p~~~~~~e~~ 171 (334)
T 2hbv_A 105 LEFAAHNPQRIKVLAQVPLQ----DLDLACKEASRAV-AAGHLGIQIGNHLG-DKDLDDATLEAFLTHCANED 171 (334)
T ss_dssp HHHHTTCTTTEEECBCCCTT----SHHHHHHHHHHHH-HHTCCCEEEESCBT-TBCTTSHHHHHHHHHHHHTT
T ss_pred HHHHhhCCCeEEEEEecCcc----CHHHHHHHHHHHH-HcCCeEEEECCCCC-CCCCCcHHHHHHHHHHHHCC
Confidence 34455566666656777764 4567778888888 45534666665321 11223467888999988876
No 380
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=28.68 E-value=2.7e+02 Score=24.12 Aligned_cols=86 Identities=13% Similarity=0.048 Sum_probs=52.7
Q ss_pred HHHHHhcCCCEEEcCC-------C------CCHHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEE
Q 016596 293 LERLALTGVDVVSLDW-------T------VDMAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHIL 359 (386)
Q Consensus 293 l~~l~e~g~d~l~~d~-------~------~dl~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Il 359 (386)
.+. .+.|+|-+.+-- . .++.++++..+++ .+-=-+.+..| |.|+++..++-+++.+.+ | +
T Consensus 73 ~~~-i~~GAdEID~Vinig~~~~g~~~~v~~ei~~v~~a~~~~-~lKvIlEt~~L--t~eei~~a~~ia~eaGAD--f-V 145 (226)
T 1vcv_A 73 VSR-LAEVADEIDVVAPIGLVKSRRWAEVRRDLISVVGAAGGR-VVKVITEEPYL--RDEERYTLYDIIAEAGAH--F-I 145 (226)
T ss_dssp HHH-HTTTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGC--CHHHHHHHHHHHHHHTCS--E-E
T ss_pred HHH-HHCCCCEEEEecchhhhcCCCHHHHHHHHHHHHHHHcCC-CceEEEeccCC--CHHHHHHHHHHHHHcCCC--E-E
Confidence 356 788988764311 1 2566667766542 22112333334 688888888777776532 3 3
Q ss_pred ecCCCC-----------CCCCcHHHHHHHHHHHHhhc
Q 016596 360 NLGHGI-----------KVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 360 s~gc~i-----------~~~tp~Eni~a~~~a~~~yg 385 (386)
-++-+. +.++.+|.++.|.+++++.|
T Consensus 146 KTSTGf~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g 182 (226)
T 1vcv_A 146 KSSTGFAEEAYAARQGNPVHSTPERAAAIARYIKEKG 182 (226)
T ss_dssp ECCCSCCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHT
T ss_pred EeCCCCCccccccccCCCCCCCHHHHHHHHHHHHHhC
Confidence 333333 47899999999999977654
No 381
>3gm8_A Glycoside hydrolase family 2, candidate beta-GLYC; structural genomics, glycosidase, PSI-2, protein initiative; 2.40A {Bacteroides vulgatus}
Probab=28.62 E-value=2.7e+02 Score=29.14 Aligned_cols=46 Identities=11% Similarity=0.319 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHHHcC-CCCeEE-ecCCCCCCCCcHHHHHHHHHHHHhh
Q 016596 338 KDFITNRINDTVRKAG-RWKHIL-NLGHGIKVGTPEENVAHFFEVAKAI 384 (386)
Q Consensus 338 ~eev~~~v~~~i~~~~-~~g~Il-s~gc~i~~~tp~Eni~a~~~a~~~y 384 (386)
++.++++++++++... ..-.|+ +.|++. .+.+.+++++|.+.+|++
T Consensus 368 ~~~~~~~~~~mv~r~rNHPSIi~Ws~gNE~-~g~~~~~~~~l~~~~k~~ 415 (801)
T 3gm8_A 368 DEWWQKDMTDFIKRDRNHPSIIMWSIGNEV-TGATPEIQHNLVSLFHQL 415 (801)
T ss_dssp HHHHHHHHHHHHHHHTTCTTEEEEEEEESC-SSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCeEEEEECccCC-CCcHHHHHHHHHHHHHHH
Confidence 5566778888888876 233443 556665 455678888999888875
No 382
>1fvp_A Flavoprotein 390, FP390; flavin-binding protein; HET: FMA; 2.70A {Photobacterium phosphoreum} SCOP: c.1.16.2
Probab=28.60 E-value=28 Score=29.99 Aligned_cols=28 Identities=14% Similarity=-0.007 Sum_probs=22.4
Q ss_pred cCCCHHHHHH-HHHHHHHHcCCCCeEEec
Q 016596 334 LFGSKDFITN-RINDTVRKAGRWKHILNL 361 (386)
Q Consensus 334 l~gt~eev~~-~v~~~i~~~~~~g~Ils~ 361 (386)
+.||||+|.+ .+++.++..|-..+++..
T Consensus 173 ~vGtpe~v~~~~l~~~~~~~G~de~~~~~ 201 (231)
T 1fvp_A 173 VTGSYKDCLSYVANLAGKFDNTVDFLLCF 201 (231)
T ss_dssp CEESSHHHHHHHHHHHHHTTTCEEEEECC
T ss_pred CccCHHHHHHHHHHHHHHHhCcCeEEEEe
Confidence 3689999999 999999987744677754
No 383
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=28.50 E-value=2.6e+02 Score=23.44 Aligned_cols=73 Identities=15% Similarity=0.184 Sum_probs=43.3
Q ss_pred HHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCC-CCcEEEEecCCcchHHHHHhcCCCEEEcCCC-
Q 016596 232 VQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHP-DLSLILYASGSGGLLERLALTGVDVVSLDWT- 309 (386)
Q Consensus 232 ~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~-~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~- 309 (386)
++..++.|++.+++-.. -++++.+.+. ++.+++.+. ...++++ ..++.+.+.|+|++++...
T Consensus 35 ~~~~~~~G~~~v~lr~~---~~~~~~~~~~--------~~~l~~~~~~~~~l~v~-----~~~~~a~~~gad~v~l~~~~ 98 (221)
T 1yad_A 35 IIITIQNEVDFIHIRER---SKSAADILKL--------LDLIFEGGIDKRKLVMN-----GRVDIALFSTIHRVQLPSGS 98 (221)
T ss_dssp HHHHHGGGCSEEEECCT---TSCHHHHHHH--------HHHHHHTTCCGGGEEEE-----SCHHHHHTTTCCEEEECTTS
T ss_pred HHHHHHCCCCEEEEccC---CCCHHHHHHH--------HHHHHHhcCcCCeEEEe-----ChHHHHHHcCCCEEEeCCCc
Confidence 34566789998876322 2566655443 333333210 0134443 2468888999999988654
Q ss_pred CCHHHHHHHhC
Q 016596 310 VDMAEGRRRLG 320 (386)
Q Consensus 310 ~dl~e~~~~~g 320 (386)
..+.++++..+
T Consensus 99 ~~~~~~~~~~~ 109 (221)
T 1yad_A 99 FSPKQIRARFP 109 (221)
T ss_dssp CCHHHHHHHCT
T ss_pred cCHHHHHHHCC
Confidence 46777777665
No 384
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=28.36 E-value=4.3e+02 Score=25.81 Aligned_cols=95 Identities=18% Similarity=0.147 Sum_probs=54.8
Q ss_pred HHHHHHHHhCCCEEEEecCCc---CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc---c-hHHHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWA---TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG---G-LLERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~---~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~---~-~l~~l~e~g~d 302 (386)
+..+.+.+.+...+.+.|..+ ++++.+...+..... ...++..+...+.. ..|.. . .++.+.+.|++
T Consensus 197 eal~~m~~~~i~~lpVVDe~g~l~GiIT~~Dil~~~~~p-----~a~~D~~~rl~V~a-avg~~~d~~era~aLveaGvd 270 (511)
T 3usb_A 197 EAEKILQKYKIEKLPLVDNNGVLQGLITIKDIEKVIEFP-----NSAKDKQGRLLVGA-AVGVTADAMTRIDALVKASVD 270 (511)
T ss_dssp HHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHHCT-----TCCBCTTSCBCCEE-EECSSTTHHHHHHHHHHTTCS
T ss_pred HHHHHHHHcCCCEEEEEeCCCCEeeeccHHHHHHhhhcc-----cchhhhccceeeee-eeeeccchHHHHHHHHhhccc
Confidence 344455667888888877544 588887765543210 11111111122222 22322 2 36778899999
Q ss_pred EEEcCCCC--------CHHHHHHHhCCCeeEEecCC
Q 016596 303 VVSLDWTV--------DMAEGRRRLGPDVAVQGNVD 330 (386)
Q Consensus 303 ~l~~d~~~--------dl~e~~~~~g~~~~l~G~vd 330 (386)
++.++... -++++++.+++..++.|++.
T Consensus 271 ~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~g~v~ 306 (511)
T 3usb_A 271 AIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIAGNVA 306 (511)
T ss_dssp EEEEECSCTTSHHHHHHHHHHHHHCTTSEEEEEEEC
T ss_pred eEEecccccchhhhhhHHHHHHHhCCCceEEeeeec
Confidence 99875331 35778888876566777764
No 385
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=27.92 E-value=2.9e+02 Score=23.79 Aligned_cols=133 Identities=9% Similarity=0.085 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHhCCCEEEEec--CCc-----CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC-------c
Q 016596 225 TTSMAKYVQYQADNGAQAVQIFD--SWA-----TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS-------G 290 (386)
Q Consensus 225 ~~~~~~~~~~~~e~G~d~i~i~d--~~~-----~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~-------~ 290 (386)
.+.+.+.++...+.|+..+.+.- +++ .-.+.+...+.+...++++.+.++++ |+.+.+|.++. .
T Consensus 87 ~~~~~~~i~~a~~lG~~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lEn~~~~~~~~~~~ 164 (290)
T 2qul_A 87 TEYVKRLLDDCHLLGAPVFAGLTFCAWPQSPPLDMKDKRPYVDRAIESVRRVIKVAEDY--GIIYALEVVNRFEQWLCND 164 (290)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEESSCCCCTTCCCCHHHHHHHHHHHHTTHHHHHHH--TCEEEEECCCTTTCSSCCS
T ss_pred HHHHHHHHHHHHHcCCCEEEeeccccCCcccCCCcccHHHHHHHHHHHHHHHHHHHHHc--CCEEEEEeCccccccccCC
Confidence 34455566667778999876421 112 22344555567788899999999887 67888987652 1
Q ss_pred -c-hHHHHHhcCCC--EEEcCC------CCCHHHHHHHhCCCeeEE--ecCCcCcc-CCCHHHHHHHHHHHHHHcC-CCC
Q 016596 291 -G-LLERLALTGVD--VVSLDW------TVDMAEGRRRLGPDVAVQ--GNVDPGAL-FGSKDFITNRINDTVRKAG-RWK 356 (386)
Q Consensus 291 -~-~l~~l~e~g~d--~l~~d~------~~dl~e~~~~~g~~~~l~--G~vd~~~l-~gt~eev~~~v~~~i~~~~-~~g 356 (386)
. ..+.+.+++.. .+.+|. ..|+.+.-+.+++++..+ -+.+...+ .|+.+ -+.+.+.++..+ .+.
T Consensus 165 ~~~~~~l~~~~~~~~~g~~~D~~h~~~~g~d~~~~l~~~~~~i~~vH~~D~~~~~~G~G~id--~~~~~~~L~~~gy~g~ 242 (290)
T 2qul_A 165 AKEAIAFADAVDSPACKVQLDTFHMNIEETSFRDAILACKGKMGHFHLGEANRLPPGEGRLP--WDEIFGALKEIGYDGT 242 (290)
T ss_dssp HHHHHHHHHHHCCTTEEEEEEHHHHHHHCSCHHHHHHHTTTTEEEEEECCTTSCCTTSSCSC--HHHHHHHHHHTTCCSC
T ss_pred HHHHHHHHHHcCCCCEEEEEEchhhhhcCCCHHHHHHHHHhheeEEEEccCCCCCCCCCCcC--HHHHHHHHHHhCCCce
Confidence 1 23444455532 233442 358888888888875442 11111223 45432 345566666666 555
Q ss_pred eEEec
Q 016596 357 HILNL 361 (386)
Q Consensus 357 ~Ils~ 361 (386)
+++=.
T Consensus 243 ~~lE~ 247 (290)
T 2qul_A 243 IVMEP 247 (290)
T ss_dssp EEECC
T ss_pred EEEEe
Confidence 55543
No 386
>1k77_A EC1530, hypothetical protein YGBM; TIM barrel, structural genomics, PSI, structure initiative; 1.63A {Escherichia coli} SCOP: c.1.15.5
Probab=27.81 E-value=2.7e+02 Score=23.62 Aligned_cols=71 Identities=17% Similarity=0.243 Sum_probs=39.3
Q ss_pred hHHHHHhcCCCEEEcC--CCCCHHHHHHHhCCC-eeEEe-cCCcC-------ccC---CCHHHHHHHHHHHHHHcC--CC
Q 016596 292 LLERLALTGVDVVSLD--WTVDMAEGRRRLGPD-VAVQG-NVDPG-------ALF---GSKDFITNRINDTVRKAG--RW 355 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d--~~~dl~e~~~~~g~~-~~l~G-~vd~~-------~l~---gt~eev~~~v~~~i~~~~--~~ 355 (386)
.++.++++|++.+.+. ...++.++++.+.+. +.+.+ +.+.. .+. ...++..+..++.++.+. |.
T Consensus 20 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~ 99 (260)
T 1k77_A 20 RFAAARKAGFDAVEFLFPYNYSTLQIQKQLEQNHLTLALFNTAPGDINAGEWGLSALPGREHEAHADIDLALEYALALNC 99 (260)
T ss_dssp HHHHHHHHTCSEEECSCCTTSCHHHHHHHHHHTTCEEEEEECCCCCGGGTCSCSTTCTTCHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhCCCEEEecCCCCCCHHHHHHHHHHcCCceEEEecCCcccccccCCCCCChhHHHHHHHHHHHHHHHHHHcCC
Confidence 4788889999988764 234666666655322 33322 22211 111 233566777888887765 44
Q ss_pred CeE-EecC
Q 016596 356 KHI-LNLG 362 (386)
Q Consensus 356 g~I-ls~g 362 (386)
.+| +.+|
T Consensus 100 ~~v~~~~g 107 (260)
T 1k77_A 100 EQVHVMAG 107 (260)
T ss_dssp SEEECCCC
T ss_pred CEEEECcC
Confidence 444 4344
No 387
>1luc_A Bacterial luciferase; monooxygenase, flavoprotein; 1.50A {Vibrio harveyi} SCOP: c.1.16.1 PDB: 1brl_A 3fgc_A*
Probab=27.59 E-value=27 Score=32.44 Aligned_cols=28 Identities=11% Similarity=0.070 Sum_probs=23.5
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCeEEec
Q 016596 334 LFGSKDFITNRINDTVRKAGRWKHILNL 361 (386)
Q Consensus 334 l~gt~eev~~~v~~~i~~~~~~g~Ils~ 361 (386)
+.||||+|.+.+++..+..|-.+|++.+
T Consensus 300 ~vGtpe~va~~l~~~~~~~G~d~~~l~~ 327 (355)
T 1luc_A 300 PVGTPEECIAIIQQDIDATGIDNICCGF 327 (355)
T ss_dssp SEESHHHHHHHHHHHHHHHCCCEEEEEC
T ss_pred cccCHHHHHHHHHHHHHHcCCCEEEEEe
Confidence 4699999999999999987744788865
No 388
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=27.55 E-value=52 Score=30.51 Aligned_cols=121 Identities=16% Similarity=0.177 Sum_probs=62.4
Q ss_pred HHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecC-CcCCCC----HHHHHHhhHHHHHHHHHHHHhhCCCCcEE
Q 016596 209 LAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDS-WATELS----PVDFEEFSLPYLKQIVDTVKQTHPDLSLI 283 (386)
Q Consensus 209 ~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~-~~~~iS----p~~f~ef~~P~~k~l~~~i~~~~~~~~~~ 283 (386)
.+|.+||.+.++.+ +.|+|.+-++-. .-+... |+ ..+-..-++++-+.+ ++|.+
T Consensus 150 ~~yTdPeea~~Fv~--------------~TgvD~LAvaiGt~HG~Yk~~~~p~--~~L~~~~L~~I~~~~-----~vpLV 208 (323)
T 2isw_A 150 VQLTEPQDAKKFVE--------------LTGVDALAVAIGTSHGAYKFKSESD--IRLAIDRVKTISDLT-----GIPLV 208 (323)
T ss_dssp CCCCCHHHHHHHHH--------------HHCCSEEEECSSCCSSSBCCCC------CCCCHHHHHHHHHH-----CSCEE
T ss_pred cccCCHHHHHHHHH--------------HHCCCEEEEecCccccccCCCCCcc--cccCHHHHHHHHHHh-----CCCeE
Confidence 36899998888776 348897665432 112222 22 112223344444443 57999
Q ss_pred EEecC----------------------Ccc-hHHHHHhcCCCEEEcCCCCC---HHHHHHHhCCCeeEEecCCcCc-cCC
Q 016596 284 LYASG----------------------SGG-LLERLALTGVDVVSLDWTVD---MAEGRRRLGPDVAVQGNVDPGA-LFG 336 (386)
Q Consensus 284 ~H~cG----------------------~~~-~l~~l~e~g~d~l~~d~~~d---l~e~~~~~g~~~~l~G~vd~~~-l~g 336 (386)
+|-.- ... .+...+++|+.=+|++...- ...+++.+..+- ...||.. +..
T Consensus 209 lHGgSsvp~~~~~~~~~~gg~~~~~~Gvp~e~i~~ai~~GV~KiNi~Tdl~~A~~~~vr~~~~~~~---~~~dpr~~l~~ 285 (323)
T 2isw_A 209 MHGSSSVPKDVKDMINKYGGKMPDAVGVPIESIVHAIGEGVCKINVDSDSRMAMTGAIRKVFVEHP---EKFDPRDYLGP 285 (323)
T ss_dssp ECSCCCCCHHHHHHHHHTTCCCTTCBCCCHHHHHHHHHTTEEEEEECHHHHHHHHHHHHHHHHHCT---TCCCTHHHHHH
T ss_pred EECCCCCCHHHHHHHHHhccccccCCCCCHHHHHHHHHCCCeEEEEChHHHHHHHHHHHHHHHhcc---ccCChHHHHHH
Confidence 99432 111 23334455655556553211 122333332110 1356653 344
Q ss_pred CHHHHHHHHHHHHHHcC
Q 016596 337 SKDFITNRINDTVRKAG 353 (386)
Q Consensus 337 t~eev~~~v~~~i~~~~ 353 (386)
..+.+++.+++.++.++
T Consensus 286 ~~~a~~~~v~~~~~~~g 302 (323)
T 2isw_A 286 GRDAITEMLIPKIKAFG 302 (323)
T ss_dssp HHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhC
Confidence 45788888888888886
No 389
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=27.46 E-value=3.4e+02 Score=24.35 Aligned_cols=84 Identities=14% Similarity=0.190 Sum_probs=51.8
Q ss_pred HHHHHHHHHhhCCCCcEEEEecC----------Ccc-hHHHHHhcCCCEEEcCCC-C--CH---HHHHHHhCCCeeEEec
Q 016596 266 LKQIVDTVKQTHPDLSLILYASG----------SGG-LLERLALTGVDVVSLDWT-V--DM---AEGRRRLGPDVAVQGN 328 (386)
Q Consensus 266 ~k~l~~~i~~~~~~~~~~~H~cG----------~~~-~l~~l~e~g~d~l~~d~~-~--dl---~e~~~~~g~~~~l~G~ 328 (386)
+++.++.+|++ |++ +..-| ... +++...++|++++.+... + +. .++.++..+...+.-.
T Consensus 82 l~ekI~l~~~~--gV~--v~~GGTlfE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~Vl~E 157 (276)
T 1u83_A 82 LEEKISTLKEH--DIT--FFFGGTLFEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFLVLSE 157 (276)
T ss_dssp HHHHHHHHHHT--TCE--EEECHHHHHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSEEEEE
T ss_pred HHHHHHHHHHc--CCe--EeCCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcEEeee
Confidence 78899999997 554 34444 333 467778899999987543 2 32 2333334344444433
Q ss_pred C---CcCcc-CCCHHHHHHHHHHHHHHcC
Q 016596 329 V---DPGAL-FGSKDFITNRINDTVRKAG 353 (386)
Q Consensus 329 v---d~~~l-~gt~eev~~~v~~~i~~~~ 353 (386)
+ ++..- .-++++..+.+++.|+++.
T Consensus 158 vG~K~~~~~~~~~~~~~I~~~~~dLeAGA 186 (276)
T 1u83_A 158 VGSKDAELASRQSSEEWLEYIVEDMEAGA 186 (276)
T ss_dssp CSCCC------CCSTHHHHHHHHHHHHTE
T ss_pred ccccCccccCCCCHHHHHHHHHHHHHCCC
Confidence 3 33222 5688999999999999863
No 390
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=27.45 E-value=1.8e+02 Score=25.78 Aligned_cols=67 Identities=24% Similarity=0.232 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC--cc-h-HHHHHhcCC
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS--GG-L-LERLALTGV 301 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~--~~-~-l~~l~e~g~ 301 (386)
+-.++-++++.++|||.|++- . .-+++..++ +.+.+ .+|+.+..-+. +. . ++.|.++|+
T Consensus 168 ~~ai~ra~a~~eAGAd~i~~e-~---~~~~~~~~~--------i~~~~-----~~P~n~~~~~~~~~p~~~~~eL~~lGv 230 (255)
T 2qiw_A 168 VEAIKRIKLMEQAGARSVYPV-G---LSTAEQVER--------LVDAV-----SVPVNITAHPVDGHGAGDLATLAGLGV 230 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEEEC-C---CCSHHHHHH--------HHTTC-----SSCBEEECBTTTBBTTBCHHHHHHTTC
T ss_pred HHHHHHHHHHHHcCCcEEEEc-C---CCCHHHHHH--------HHHhC-----CCCEEEEecCCCCCCCCCHHHHHHcCC
Confidence 445566778899999999862 2 233444433 33443 24655442122 12 3 799999999
Q ss_pred CEEEcCCC
Q 016596 302 DVVSLDWT 309 (386)
Q Consensus 302 d~l~~d~~ 309 (386)
..+++...
T Consensus 231 ~~v~~~~~ 238 (255)
T 2qiw_A 231 RRVTFGPL 238 (255)
T ss_dssp CEEECTTH
T ss_pred CEEEEHHH
Confidence 99987654
No 391
>4f0r_A 5-methylthioadenosine/S-adenosylhomocysteine DEAM; structural genomics, PSI-biology; HET: MSE MTA; 1.80A {Chromobacterium violaceum} PDB: 4f0s_A*
Probab=27.36 E-value=1.4e+02 Score=28.03 Aligned_cols=51 Identities=6% Similarity=-0.100 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHHcCC-CCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 335 FGSKDFITNRINDTVRKAGR-WKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~~-~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
..++++..++++++++...+ +..-+..+-.-+...++|.++++++.++++|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g 213 (447)
T 4f0r_A 162 ASNADDYIAKGMAERSQFLGEDLLTFTLAPHAPYTVSDDTFRKVVTLAEQED 213 (447)
T ss_dssp CSSHHHHHHHHHHHHHTTTTCTTEEEEEEECCGGGSCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCCCCHHHHHHHHHHHHHcC
Confidence 45667777777777776542 2222222112244567888888888888876
No 392
>2qiw_A PEP phosphonomutase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: P6G; 1.80A {Corynebacterium glutamicum atcc 13032}
Probab=27.25 E-value=2.9e+02 Score=24.31 Aligned_cols=87 Identities=9% Similarity=0.036 Sum_probs=55.1
Q ss_pred HHHHHHHHhCCCEEEEecCC----cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC----C------cc-hH-
Q 016596 230 KYVQYQADNGAQAVQIFDSW----ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG----S------GG-LL- 293 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~----~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG----~------~~-~l- 293 (386)
+.++.++++|+.+|.+-|.. ..+++.+.+ .+-.+.+.++..+.+....++-|+.- . .. .+
T Consensus 97 ~~~~~l~~aGa~gv~iEd~~~~~~k~l~~~~e~----~~~I~a~~~a~~~~g~~~~v~aRtd~~~~g~~~~~~~~~~ai~ 172 (255)
T 2qiw_A 97 DLIAQILEAGAVGINVEDVVHSEGKRVREAQEH----ADYIAAARQAADVAGVDVVINGRTDAVKLGADVFEDPMVEAIK 172 (255)
T ss_dssp HHHHHHHHTTCCEEEECSEEGGGTTEECCHHHH----HHHHHHHHHHHHHHTCCCEEEEEECHHHHCTTTSSSHHHHHHH
T ss_pred HHHHHHHHcCCcEEEECCCCCCCCCcccCHHHH----HHHHHHHHHHHHhcCCCeEEEEEechhhccCCcchHHHHHHHH
Confidence 44556778999999987643 236776655 34566777776655322226667763 1 11 23
Q ss_pred --HHHHhcCCCEEEcCCCCCHHHHHHHhC
Q 016596 294 --ERLALTGVDVVSLDWTVDMAEGRRRLG 320 (386)
Q Consensus 294 --~~l~e~g~d~l~~d~~~dl~e~~~~~g 320 (386)
..+.+.|+|++-++...+.+++++...
T Consensus 173 ra~a~~eAGAd~i~~e~~~~~~~~~~i~~ 201 (255)
T 2qiw_A 173 RIKLMEQAGARSVYPVGLSTAEQVERLVD 201 (255)
T ss_dssp HHHHHHHHTCSEEEECCCCSHHHHHHHHT
T ss_pred HHHHHHHcCCcEEEEcCCCCHHHHHHHHH
Confidence 345678999998877667777766543
No 393
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=27.13 E-value=1.6e+02 Score=25.15 Aligned_cols=68 Identities=10% Similarity=0.028 Sum_probs=36.8
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEE
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVS 305 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~ 305 (386)
+.++.+.+.|+|.+.+-.--++++... .+.. ++++.+++.. ..+...|.=-+.. +++.+.+.|+|.+.
T Consensus 23 ~~i~~~~~~Gad~i~l~i~Dg~fv~~~---~~~~----~~~~~lr~~~-~~~~~v~lmv~d~~~~i~~~~~agad~v~ 92 (228)
T 1h1y_A 23 AEADRMVRLGADWLHMDIMDGHFVPNL---TIGA----PVIQSLRKHT-KAYLDCHLMVTNPSDYVEPLAKAGASGFT 92 (228)
T ss_dssp HHHHHHHHTTCSEEEEEEEBSSSSSCB---CBCH----HHHHHHHTTC-CSEEEEEEESSCGGGGHHHHHHHTCSEEE
T ss_pred HHHHHHHHcCCCEEEEEEecCCcCcch---hhCH----HHHHHHHhhc-CCcEEEEEEecCHHHHHHHHHHcCCCEEE
Confidence 445566788999877542113322210 1222 3344445433 2355666544443 57888888888883
No 394
>3be7_A Zn-dependent arginine carboxypeptidase; unknown source, amidohydrolase, sargasso SEA, structural GEN protein structure initiative, PSI; HET: ARG; 2.30A {Unidentified} SCOP: b.92.1.9 c.1.9.18 PDB: 3dug_A*
Probab=27.12 E-value=1.7e+02 Score=26.85 Aligned_cols=72 Identities=19% Similarity=0.234 Sum_probs=42.1
Q ss_pred HHHhCCCEEEEecCCc----------CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEE
Q 016596 235 QADNGAQAVQIFDSWA----------TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVV 304 (386)
Q Consensus 235 ~~e~G~d~i~i~d~~~----------~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l 304 (386)
..+.|++.+-++.+.+ ..++++. ++++++.+++. |.++..|+.+... ++...+.|++.+
T Consensus 175 ~~~~g~~~ik~~~~g~~~~~~~~~g~~~~~~~~--------l~~~~~~A~~~--g~~v~~H~~~~~~-i~~~~~~g~~~i 243 (408)
T 3be7_A 175 NRKYGADLIKFCATGGVMSRNTDVNAKQFTLEE--------MKAIVDEAHNH--GMKVAAHAHGLIG-IKAAIKAGVDSV 243 (408)
T ss_dssp HHHTTCSEEEEECBCCSSSSSCCTTSBCSCHHH--------HHHHHHHHHHT--TCEEEEEECSHHH-HHHHHHHTCSEE
T ss_pred HHhcCCCEEEEEecCCcCCCCCCCCCCCCCHHH--------HHHHHHHHHHC--CCEEEEEeCCHHH-HHHHHHcCCCEE
Confidence 3467888775542211 1344444 45677778876 6799999976432 556667888776
Q ss_pred EcCCCCCHHHHHH
Q 016596 305 SLDWTVDMAEGRR 317 (386)
Q Consensus 305 ~~d~~~dl~e~~~ 317 (386)
.=....+.+.++.
T Consensus 244 ~H~~~~~~~~i~~ 256 (408)
T 3be7_A 244 EHASFIDDETIDM 256 (408)
T ss_dssp EECTTCCHHHHHH
T ss_pred EECCCCCHHHHHH
Confidence 3222344444443
No 395
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=27.09 E-value=1.3e+02 Score=27.72 Aligned_cols=54 Identities=17% Similarity=0.100 Sum_probs=25.9
Q ss_pred CHHHHHHHhCCCeeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHH
Q 016596 311 DMAEGRRRLGPDVAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFE 379 (386)
Q Consensus 311 dl~e~~~~~g~~~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~ 379 (386)
+++++++.+.. +.|-..| +.+++++++.++. ++ +.--|..+| +..++|++++.+
T Consensus 240 tldea~eAl~a------GaD~I~LDn~~~~~l~~av~~-l~---~~v~ieaSG-----GIt~~~I~~~a~ 294 (320)
T 3paj_A 240 TLAELEEAISA------GADIIMLDNFSLEMMREAVKI-NA---GRAALENSG-----NITLDNLKECAE 294 (320)
T ss_dssp SHHHHHHHHHT------TCSEEEEESCCHHHHHHHHHH-HT---TSSEEEEES-----SCCHHHHHHHHT
T ss_pred CHHHHHHHHHc------CCCEEEECCCCHHHHHHHHHH-hC---CCCeEEEEC-----CCCHHHHHHHHH
Confidence 34555554421 3444445 5666666655543 22 222333333 335666666554
No 396
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=27.00 E-value=1.4e+02 Score=27.27 Aligned_cols=10 Identities=20% Similarity=-0.296 Sum_probs=6.0
Q ss_pred EEeecCcHHH
Q 016596 180 VLGFVGAPFT 189 (386)
Q Consensus 180 v~~~~~gPft 189 (386)
++..+.||..
T Consensus 101 ~v~~i~G~a~ 110 (300)
T 3l0g_A 101 TLVSGEALAI 110 (300)
T ss_dssp EEEEEEEEHH
T ss_pred EEEEEEECHH
Confidence 4456677754
No 397
>1wzu_A Quinolinate synthetase A; NAD, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: c.145.1.1 PDB: 2qs0_A
Probab=26.89 E-value=2.8e+02 Score=25.21 Aligned_cols=22 Identities=23% Similarity=0.021 Sum_probs=8.9
Q ss_pred CCCEEEEecCCc-----CCCCHHHHHH
Q 016596 239 GAQAVQIFDSWA-----TELSPVDFEE 260 (386)
Q Consensus 239 G~d~i~i~d~~~-----~~iSp~~f~e 260 (386)
+-+.+.+.|..+ ..++++.+++
T Consensus 70 p~k~Vl~pd~~a~C~~a~~~~~e~v~~ 96 (300)
T 1wzu_A 70 PDKVVLIPSREATCAMANMLKVEHILE 96 (300)
T ss_dssp TTSEEECCC------------CHHHHH
T ss_pred CCCEEECCCCCCCcccccCCCHHHHHH
Confidence 445555554222 2677777666
No 398
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=26.66 E-value=3.1e+02 Score=23.57 Aligned_cols=101 Identities=7% Similarity=-0.077 Sum_probs=48.1
Q ss_pred HHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec--CCcc--hHHHHHhcCCCEEEcCCCC--C-HHHHHHH---hCCCeeE
Q 016596 256 VDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS--GSGG--LLERLALTGVDVVSLDWTV--D-MAEGRRR---LGPDVAV 325 (386)
Q Consensus 256 ~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c--G~~~--~l~~l~e~g~d~l~~d~~~--d-l~e~~~~---~g~~~~l 325 (386)
..|..+..+..+++-+. .+..++.=+|.. |++. ..+.+.+.|+|.+.+.... + +..+.+. .|.++.+
T Consensus 46 ~lf~~~G~~~v~~l~~~---~g~~v~lD~Kl~DipnTv~~~~~~~~~~gad~vtvh~~~G~~~l~~~~~~~~~~g~~v~v 122 (228)
T 3m47_A 46 PLVLSEGMDIIAEFRKR---FGCRIIADFKVADIPETNEKICRATFKAGADAIIVHGFPGADSVRACLNVAEEMGREVFL 122 (228)
T ss_dssp HHHHHHCTHHHHHHHHH---HCCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHhcCHHHHHHHHhc---CCCeEEEEEeecccHhHHHHHHHHHHhCCCCEEEEeccCCHHHHHHHHHHHHhcCCCeEE
Confidence 56666666555544332 211233334665 3332 3688889999998775443 2 4444333 4554444
Q ss_pred EecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEE
Q 016596 326 QGNVDPGALFGSKDFITNRINDTVRKAGRWKHIL 359 (386)
Q Consensus 326 ~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Il 359 (386)
.--.++.......+++.+++.++-.+.|-.|+|.
T Consensus 123 Lt~~s~~~~~~~~~~~~~~~a~~a~~~G~~GvV~ 156 (228)
T 3m47_A 123 LTEMSHPGAEMFIQGAADEIARMGVDLGVKNYVG 156 (228)
T ss_dssp ECCCCSGGGGTTHHHHHHHHHHHHHHTTCCEEEC
T ss_pred EEeCCCccHHHHHHHHHHHHHHHHHHhCCcEEEE
Confidence 3333332211112234444444444444335554
No 399
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=26.33 E-value=3e+02 Score=23.32 Aligned_cols=79 Identities=15% Similarity=0.230 Sum_probs=43.3
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEE---------Eec-CCc-chHHHHHh
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLIL---------YAS-GSG-GLLERLAL 298 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~---------H~c-G~~-~~l~~l~e 298 (386)
+.++++.++|++.+.+. +| +.++.+++.. +.|++- |.- +.. ..++.+.+
T Consensus 40 ~~a~~~~~~G~~~i~~~-------~~------------~~i~~i~~~~-~~p~i~~~~~~~~~~~~~i~~~~~~i~~~~~ 99 (234)
T 1yxy_A 40 LMAKAAQEAGAVGIRAN-------SV------------RDIKEIQAIT-DLPIIGIIKKDYPPQEPFITATMTEVDQLAA 99 (234)
T ss_dssp HHHHHHHHHTCSEEEEE-------SH------------HHHHHHHTTC-CSCEEEECBCCCTTSCCCBSCSHHHHHHHHT
T ss_pred HHHHHHHHCCCcEeecC-------CH------------HHHHHHHHhC-CCCEEeeEcCCCCccccccCChHHHHHHHHH
Confidence 44566778899998763 33 2245555543 466531 111 111 14677888
Q ss_pred cCCCEEEcCCC----C---C----HHHHHHHhCCCeeEEecC
Q 016596 299 TGVDVVSLDWT----V---D----MAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 299 ~g~d~l~~d~~----~---d----l~e~~~~~g~~~~l~G~v 329 (386)
.|++.+.++.. . . +.++++.+++ +.+..++
T Consensus 100 ~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~~-~~v~~~~ 140 (234)
T 1yxy_A 100 LNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYPN-QLLMADI 140 (234)
T ss_dssp TTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCTT-CEEEEEC
T ss_pred cCCCEEEEcccccCCCCCccHHHHHHHHHHhCCC-CeEEEeC
Confidence 99998876432 1 1 4566666644 3444433
No 400
>2wm1_A 2-amino-3-carboxymuconate-6-semialdehyde decarboxylase; neurological disorders, metal-dependent amidohydrolase, kynurenine pathway; HET: 13P; 2.01A {Homo sapiens}
Probab=25.71 E-value=87 Score=28.42 Aligned_cols=68 Identities=7% Similarity=0.087 Sum_probs=44.9
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCC-CCCCCCcHHHHHHHHHHHHhhc
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGH-GIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc-~i~~~tp~Eni~a~~~a~~~yg 385 (386)
+.++.+..++++.-.|.++|. .+++..++++++++..+=.|+-+.+.. +... ..+.+..+++++.++|
T Consensus 100 ~~~~~~~~p~r~~~~~~l~~~----~~~~a~~el~~~~~~~g~~Gv~l~~~~~~~~l--~d~~~~~~~~~~~e~~ 168 (336)
T 2wm1_A 100 LASTVVSYPRRFVGLGTLPMQ----APELAVKEMERCVKELGFPGVQIGTHVNEWDL--NAQELFPVYAAAERLK 168 (336)
T ss_dssp HHHHHHHSTTTEEEEECCCTT----SHHHHHHHHHHHHHTSCCSEEEEESEETTEET--TCGGGHHHHHHHHHHT
T ss_pred HHHHHHhccCceeEEEeCCCc----CHHHHHHHHHHHHHccCCeEEEECCcCCCCCC--CCccHHHHHHHHHHcC
Confidence 345667778877777888874 356778888888877663466565532 2212 2345778888888875
No 401
>3ist_A Glutamate racemase; structural genomics, cell WALL biogenesis/degradation, isomerase, peptidoglycan synthesis; HET: MSE; 1.65A {Listeria monocytogenes} PDB: 3hfr_A* 3isv_A*
Probab=25.63 E-value=3.5e+02 Score=23.94 Aligned_cols=62 Identities=10% Similarity=0.143 Sum_probs=40.5
Q ss_pred CCCEEEEecCCc---CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-h-HHHHHh-cCCCEEEc
Q 016596 239 GAQAVQIFDSWA---TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-L-LERLAL-TGVDVVSL 306 (386)
Q Consensus 239 G~d~i~i~d~~~---~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~-l~~l~e-~g~d~l~~ 306 (386)
..+.++++|... +--|++.-.++ ..++++.+.+. |+..++-.|...+ . ++.+.+ +++-++++
T Consensus 30 ~~~~iy~~D~a~~PYG~ks~~~i~~~----~~~~~~~L~~~--g~~~IVIACNTa~~~al~~lr~~~~iPvigi 97 (269)
T 3ist_A 30 HEQVYYLGDTARCPYGPRDKEEVAKF----TWEMTNFLVDR--GIKMLVIACNTATAAALYDIREKLDIPVIGV 97 (269)
T ss_dssp TCCEEEEECGGGCCCTTSCHHHHHHH----HHHHHHHHHHT--TCSEEEECCHHHHHHHHHHHHHHCSSCEEES
T ss_pred CCcEEEEeCCCCCCCCCCCHHHHHHH----HHHHHHHHHHC--CCCEEEEeCCCccHHHHHHHHHhcCCCEEee
Confidence 568899988543 24565555554 44566666665 5677777776555 3 788875 57778874
No 402
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=25.48 E-value=3e+02 Score=23.03 Aligned_cols=76 Identities=20% Similarity=0.183 Sum_probs=41.5
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEE---Ee--cC-----Ccc-hHHHH
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLIL---YA--SG-----SGG-LLERL 296 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~---H~--cG-----~~~-~l~~l 296 (386)
..+.++++.++|++.+.+. ++ +.++.+++.. +.|++- +. .+ ... .++.+
T Consensus 25 ~~~~a~~~~~~Ga~~i~~~-------~~------------~~i~~i~~~~-~~pv~~~~~~~~~~~~~~i~~~~~~i~~~ 84 (223)
T 1y0e_A 25 MSKMALAAYEGGAVGIRAN-------TK------------EDILAIKETV-DLPVIGIVKRDYDHSDVFITATSKEVDEL 84 (223)
T ss_dssp HHHHHHHHHHHTCSEEEEE-------SH------------HHHHHHHHHC-CSCEEEECBCCCTTCCCCBSCSHHHHHHH
T ss_pred HHHHHHHHHHCCCeeeccC-------CH------------HHHHHHHHhc-CCCEEeeeccCCCccccccCCcHHHHHHH
Confidence 3455667778999998752 22 2244444443 456531 10 11 111 36777
Q ss_pred HhcCCCEEEcCCC----C--C----HHHHHHHhCCCe
Q 016596 297 ALTGVDVVSLDWT----V--D----MAEGRRRLGPDV 323 (386)
Q Consensus 297 ~e~g~d~l~~d~~----~--d----l~e~~~~~g~~~ 323 (386)
.+.|++.+.+... . + ++++++.+++..
T Consensus 85 ~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~~~~ 121 (223)
T 1y0e_A 85 IESQCEVIALDATLQQRPKETLDELVSYIRTHAPNVE 121 (223)
T ss_dssp HHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCTTSE
T ss_pred HhCCCCEEEEeeecccCcccCHHHHHHHHHHhCCCce
Confidence 8889998865432 1 2 456677675443
No 403
>3sdo_A Nitrilotriacetate monooxygenase; seattle structural genomics center for infectious disease, S oxidoreductase; 2.00A {Burkholderia pseudomallei} SCOP: c.1.16.0
Probab=25.23 E-value=69 Score=31.12 Aligned_cols=42 Identities=12% Similarity=0.200 Sum_probs=32.9
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHH
Q 016596 334 LFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVA 381 (386)
Q Consensus 334 l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~ 381 (386)
+-||||+|.++..+..+..+-.||+|++. ..++.+..+++.+
T Consensus 371 ~vGtp~~vAd~l~~w~~~~~~DGf~l~~~------~~p~~l~~f~~~v 412 (453)
T 3sdo_A 371 FIGTPEAVASEMIRWVDEGAADGFMLGLP------VTGFGLDDFVDHV 412 (453)
T ss_dssp GEECHHHHHHHHHHHHHTTSCSEEEECCS------SHHHHHHHHHHHH
T ss_pred EeeCHHHHHHHHHHHHhccCCCeEEEcCC------CChhHHHHHHHhh
Confidence 47999999999999999887559999753 3456677766654
No 404
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=25.19 E-value=64 Score=28.32 Aligned_cols=49 Identities=16% Similarity=0.160 Sum_probs=33.2
Q ss_pred HHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCCCCHHHHHH
Q 016596 267 KQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWTVDMAEGRR 317 (386)
Q Consensus 267 k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~~dl~e~~~ 317 (386)
+++++.+|+. |.++......+...+..+.+.|+|.+.-|...-+.++++
T Consensus 194 ~~~v~~~~~~--G~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P~~~~~~~~ 242 (250)
T 3ks6_A 194 AGLMAQVQAA--GLDFGCWAAHTPSQITKALDLGVKVFTTDRPTLAIALRT 242 (250)
T ss_dssp HHHHHHHHHT--TCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHHHHHH
T ss_pred HHHHHHHHHC--CCEEEEEeCCCHHHHHHHHHcCCCEEEcCCHHHHHHHHH
Confidence 3567778886 577777766554467888899999998775333333333
No 405
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=25.09 E-value=3e+02 Score=22.95 Aligned_cols=114 Identities=14% Similarity=0.158 Sum_probs=62.9
Q ss_pred CCCEEEEecCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc--c--hHHHHHhcCCCEEE--cCCCCC
Q 016596 239 GAQAVQIFDSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG--G--LLERLALTGVDVVS--LDWTVD 311 (386)
Q Consensus 239 G~d~i~i~d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~--~--~l~~l~e~g~d~l~--~d~~~d 311 (386)
+...|.+.. +. ++.|+ ++.++++.+++. |..+.+.+.|.. . .++.+.+. ++.++ ++. .+
T Consensus 69 ~~~~i~~~G--GEP~l~~~--------~l~~l~~~~~~~--~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~-~~ 134 (245)
T 3c8f_A 69 SGGGVTASG--GEAILQAE--------FVRDWFRACKKE--GIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQ-MN 134 (245)
T ss_dssp TTCEEEEEE--SCGGGGHH--------HHHHHHHHHHTT--TCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCC-SS
T ss_pred CCCeEEEEC--CCcCCCHH--------HHHHHHHHHHHc--CCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCC-CC
Confidence 456676654 22 34432 356778888876 467888888854 3 46777776 77654 443 24
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCC--CCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGR--WKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~--~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
-+. .+++. | . +.+++.+.++.+.+.+-. -.+++.+|. +-..+.+..+++.+++.|
T Consensus 135 ~~~-~~~~~------~-~-------~~~~~~~~i~~l~~~g~~v~i~~~~~~g~----~~~~~~~~~~~~~~~~~~ 191 (245)
T 3c8f_A 135 DEI-HQNLV------G-V-------SNHRTLEFAKYLANKNVKVWIRYVVVPGW----SDDDDSAHRLGEFTRDMG 191 (245)
T ss_dssp HHH-HHHHH------S-S-------CSHHHHHHHHHHHHHTCCEEEEEEECTTT----TCCHHHHHHHHHHHHHHC
T ss_pred HHH-hhhcc------C-C-------CHHHHHHHHHHHHhcCCEEEEEEeecCCC----CCCHHHHHHHHHHHHhcC
Confidence 333 33331 1 1 125666666666554211 112222221 224678888888888765
No 406
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.07 E-value=1.9e+02 Score=20.70 Aligned_cols=26 Identities=23% Similarity=0.365 Sum_probs=19.7
Q ss_pred cCCcCcc-CCCHHHHHHHHHHHHHHcC
Q 016596 328 NVDPGAL-FGSKDFITNRINDTVRKAG 353 (386)
Q Consensus 328 ~vd~~~l-~gt~eev~~~v~~~i~~~~ 353 (386)
|+.-..| .-.|||+...|++.++..|
T Consensus 77 gvsydvlkstdpeeltqrvreflktag 103 (112)
T 2lnd_A 77 GVSYDVLKSTDPEELTQRVREFLKTAG 103 (112)
T ss_dssp TCEEEEEECCCHHHHHHHHHHHHHHTT
T ss_pred CcchhhhccCCHHHHHHHHHHHHHhcc
Confidence 3444456 6779999999999998875
No 407
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=24.96 E-value=4.3e+02 Score=24.67 Aligned_cols=106 Identities=8% Similarity=-0.034 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHHHH-HhCCCEEEEecCCc----CCCCHHH------------HHHhhHHHHHHHHHHHHhhCCCCcEEEE
Q 016596 223 KFTTSMAKYVQYQA-DNGAQAVQIFDSWA----TELSPVD------------FEEFSLPYLKQIVDTVKQTHPDLSLILY 285 (386)
Q Consensus 223 ~~~~~~~~~~~~~~-e~G~d~i~i~d~~~----~~iSp~~------------f~ef~~P~~k~l~~~i~~~~~~~~~~~H 285 (386)
.+.+...+.++... ++|.|+|-+.-.-+ .|+||.. ++. =..+..++++++++..+..++.+-
T Consensus 171 ~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slen-R~r~~~eiv~aVr~avg~~~v~vR 249 (379)
T 3aty_A 171 GIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDT-RCQLIYDVTKSVCDAVGSDRVGLR 249 (379)
T ss_dssp THHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHH-HHHHHHHHHHHHHHHHCGGGEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhh-hHHHHHHHHHHHHHhcCCCeEEEE
Confidence 33444455666777 89999998754321 1333321 111 123455666666654321256664
Q ss_pred ecCC---------cc------hHHHHHhcCCCEEEcCCC--------CCHHHHHHHhCCCeeEEecC
Q 016596 286 ASGS---------GG------LLERLALTGVDVVSLDWT--------VDMAEGRRRLGPDVAVQGNV 329 (386)
Q Consensus 286 ~cG~---------~~------~l~~l~e~g~d~l~~d~~--------~dl~e~~~~~g~~~~l~G~v 329 (386)
+..+ +. +...+.+.|++.+++... .++.++|+.++.-++..|++
T Consensus 250 is~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~ir~~~~iPvi~~G~i 316 (379)
T 3aty_A 250 ISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLRGDMVNQQIGDVVAWVRGSYSGVKISNLRY 316 (379)
T ss_dssp ECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEECSCTTSCCCCCHHHHHHTTCCSCEEEESSC
T ss_pred ECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcCCCcCCCCccHHHHHHHHHCCCcEEEECCC
Confidence 3321 11 235667889999977431 12566777775545555655
No 408
>3lnp_A Amidohydrolase family protein OLEI01672_1_465; TIM barrel, beta-fold, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Oleispira antarctica}
Probab=24.67 E-value=1.8e+02 Score=27.48 Aligned_cols=51 Identities=6% Similarity=0.014 Sum_probs=31.6
Q ss_pred CCCHHHHHHHHHHHHHHcCC-C-----CeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 335 FGSKDFITNRINDTVRKAGR-W-----KHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~~-~-----g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
..++++..+.++++++...+ + ..-++.+-.-++..++|.++++++.++++|
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g 240 (468)
T 3lnp_A 184 AQNADEYIRKAIECNDRFNNHPMNEQGLVQIGFGPHAPYTVSDEPLKEITMLSDQLD 240 (468)
T ss_dssp CSSHHHHHHHHHHHHHHHHSCGGGTTCCEEEEEEECCTTTSCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHhhcCCcccCceEEEEEEcCCCCCCCHHHHHHHHHHHHHcC
Confidence 45667777777777776432 1 222222223345667888889999888876
No 409
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=24.59 E-value=3.2e+02 Score=23.05 Aligned_cols=139 Identities=22% Similarity=0.344 Sum_probs=74.2
Q ss_pred HHHHHHHHHHHhCCceeEE--eecCcHHHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHH--------------
Q 016596 163 VGKALTILREEVNNEAAVL--GFVGAPFTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTT-------------- 226 (386)
Q Consensus 163 ~~ea~~~l~~~~g~~~~v~--~~~~gPft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~-------------- 226 (386)
..+.++.+++.+ .+|++ +.+..|-+....+.- |.. .. .+-..+..+|+.+.++.+..-.
T Consensus 65 ~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~-Gad-~V-~i~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~g 139 (253)
T 1h5y_A 65 FIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRA-GAD-KV-SVNTAAVRNPQLVALLAREFGSQSTVVAIDAKWNGE 139 (253)
T ss_dssp HHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHH-TCS-EE-EESHHHHHCTHHHHHHHHHHCGGGEEEEEEEEECSS
T ss_pred cHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHc-CCC-EE-EEChHHhhCcHHHHHHHHHcCCCcEEEEEEeecCCC
Confidence 345566677765 35654 344556544322222 111 11 1113456788888777665321
Q ss_pred ---------------HHHHHHHHHHHhCCCEEEEecCC--cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 016596 227 ---------------SMAKYVQYQADNGAQAVQIFDSW--ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS 289 (386)
Q Consensus 227 ---------------~~~~~~~~~~e~G~d~i~i~d~~--~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~ 289 (386)
...+.++.+.+.|++.|.+..-. ++.-. +-+..++++.+.. +.|++ ..|.
T Consensus 140 ~~~v~~~~~~~~~~~~~~e~~~~~~~~G~d~i~~~~~~~~g~~~~------~~~~~i~~l~~~~-----~~pvi--a~GG 206 (253)
T 1h5y_A 140 YYEVYVKGGREATGLDAVKWAKEVEELGAGEILLTSIDRDGTGLG------YDVELIRRVADSV-----RIPVI--ASGG 206 (253)
T ss_dssp SEEEEETTTTEEEEEEHHHHHHHHHHHTCSEEEEEETTTTTTCSC------CCHHHHHHHHHHC-----SSCEE--EESC
T ss_pred cEEEEEeCCeecCCCCHHHHHHHHHhCCCCEEEEecccCCCCcCc------CCHHHHHHHHHhc-----CCCEE--EeCC
Confidence 23566778888999998875422 11111 1233344444432 35643 4454
Q ss_pred cc---hHHHHHhcCCCEEEcC-----CCCCHHHHHHHh
Q 016596 290 GG---LLERLALTGVDVVSLD-----WTVDMAEGRRRL 319 (386)
Q Consensus 290 ~~---~l~~l~e~g~d~l~~d-----~~~dl~e~~~~~ 319 (386)
.. .+..+.+.|++++.+. ...++.++++.+
T Consensus 207 i~~~~~~~~~~~~Ga~~v~vgsal~~~~~~~~~~~~~l 244 (253)
T 1h5y_A 207 AGRVEHFYEAAAAGADAVLAASLFHFRVLSIAQVKRYL 244 (253)
T ss_dssp CCSHHHHHHHHHTTCSEEEESHHHHTTSSCHHHHHHHH
T ss_pred CCCHHHHHHHHHcCCcHHHHHHHHHcCCCCHHHHHHHH
Confidence 43 3666667899988653 234677776655
No 410
>2hk0_A D-psicose 3-epimerase; TIM-barrel, isomerase; 2.00A {Agrobacterium tumefaciens} PDB: 2hk1_A*
Probab=24.59 E-value=1.6e+02 Score=26.08 Aligned_cols=93 Identities=12% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHHHHhcCCCEEEcCCC-------CCHHHHHHHhCCC-eeEEecCC---cCccCCCHHHHH----HHHHHHHHHcC--CC
Q 016596 293 LERLALTGVDVVSLDWT-------VDMAEGRRRLGPD-VAVQGNVD---PGALFGSKDFIT----NRINDTVRKAG--RW 355 (386)
Q Consensus 293 l~~l~e~g~d~l~~d~~-------~dl~e~~~~~g~~-~~l~G~vd---~~~l~gt~eev~----~~v~~~i~~~~--~~ 355 (386)
++.+.++|++.+.+... .++.++++.+.+. +.+.+..+ ...+.+..++.+ +..++.++.+. |.
T Consensus 42 l~~~~~~G~~~vEl~~~~~~~~~~~~~~~l~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~A~~lG~ 121 (309)
T 2hk0_A 42 IEKVAKLGFDIIEVAAHHINEYSDAELATIRKSAKDNGIILTAGIGPSKTKNLSSEDAAVRAAGKAFFERTLSNVAKLDI 121 (309)
T ss_dssp HHHHHHTTCSEEEEEHHHHTTSCHHHHHHHHHHHHHTTCEEEEECCCCSSSCSSCSCHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCEEEeccCCccccchhhHHHHHHHHHHcCCeEEEecCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHcCC
Q ss_pred CeEEecC----CCCCCCC-c--------HHHHHHHHHHHHhhc
Q 016596 356 KHILNLG----HGIKVGT-P--------EENVAHFFEVAKAIR 385 (386)
Q Consensus 356 g~Ils~g----c~i~~~t-p--------~Eni~a~~~a~~~yg 385 (386)
.+|..+. ...+++. + .++++.+.+.++++|
T Consensus 122 ~~v~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~g 164 (309)
T 2hk0_A 122 HTIGGALHSYWPIDYSQPVDKAGDYARGVEGINGIADFANDLG 164 (309)
T ss_dssp CEEEECTTSCSSCCTTSCCCHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CEEEeeccccccccCCCcCChHHHHHHHHHHHHHHHHHHHHcC
No 411
>3hkx_A Amidase; alpha-beta-BETA-alpha:alpha-beta-BETA-alpha dimeric sandwich hydrolase; 1.66A {Nesterenkonia SP}
Probab=24.51 E-value=2.3e+02 Score=24.99 Aligned_cols=46 Identities=9% Similarity=0.081 Sum_probs=28.8
Q ss_pred HHHHHHHhCCCEEEEecCCcCCCCHHHHH-Hh----hHHHHHHHHHHHHhh
Q 016596 231 YVQYQADNGAQAVQIFDSWATELSPVDFE-EF----SLPYLKQIVDTVKQT 276 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~~iSp~~f~-ef----~~P~~k~l~~~i~~~ 276 (386)
+++...+.|+|.|.+.+.+-+-..++.+. ++ ..|..+.+.+.++++
T Consensus 45 ~i~~A~~~gadlvvfPE~~l~gy~~~d~~~~~a~~~~~~~~~~l~~~a~~~ 95 (283)
T 3hkx_A 45 AAARASEQGAQLLLTPELFGFGYVPSQICAQVSAEQVDAARSRLRGIARDR 95 (283)
T ss_dssp HHHHHHHTTCSEEECCTTGGGCSCHHHHHHHCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCCEEEcCCCcccCCChHHHHHHhccccCCHHHHHHHHHHHHh
Confidence 33445567999999888654434444333 33 346777777777775
No 412
>2czd_A Orotidine 5'-phosphate decarboxylase; pyrimidine biosynthesis, orotidine 5'-phosphate decarboxylas (ompdecase), structural genomics; 1.60A {Pyrococcus horikoshii} SCOP: c.1.2.3 PDB: 2cz5_A 2cze_A* 2czf_A*
Probab=24.36 E-value=2.8e+02 Score=23.17 Aligned_cols=70 Identities=9% Similarity=0.090 Sum_probs=39.3
Q ss_pred HHHHHhhHHHHHHHHHHHHhhCCCCcEEEEec--CCcc--hHHHHHhcCCCEEEcCCCCC---HHHHHHHhCCCeeEEec
Q 016596 256 VDFEEFSLPYLKQIVDTVKQTHPDLSLILYAS--GSGG--LLERLALTGVDVVSLDWTVD---MAEGRRRLGPDVAVQGN 328 (386)
Q Consensus 256 ~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~c--G~~~--~l~~l~e~g~d~l~~d~~~d---l~e~~~~~g~~~~l~G~ 328 (386)
..|..|..+..+++-+.. +..++.=+|.. +++. .++.+.++|+|.+.+..... ++.+++. + .+.+.-.
T Consensus 33 ~~f~~~G~~~i~~lr~~~---~~~v~~D~kl~DI~~t~~~~v~~~~~~Gad~vtvh~~~g~~~i~~~~~~-~-gv~vl~~ 107 (208)
T 2czd_A 33 PLILGSGVDIIRRLKEET---GVEIIADLKLADIPNTNRLIARKVFGAGADYVIVHTFVGRDSVMAVKEL-G-EIIMVVE 107 (208)
T ss_dssp HHHHHHCTTHHHHHHHHH---CCEEEEEEEECSCHHHHHHHHHHHHHTTCSEEEEESTTCHHHHHHHHTT-S-EEEEECC
T ss_pred HHHHhhCHHHHHHHHHcC---CCEEEEEeeeCchHHHHHHHHHHHHhcCCCEEEEeccCCHHHHHHHHHh-C-CcEEEEe
Confidence 345666666555544332 11345567887 6654 36888899999887654433 4444432 2 3555544
Q ss_pred CC
Q 016596 329 VD 330 (386)
Q Consensus 329 vd 330 (386)
.+
T Consensus 108 t~ 109 (208)
T 2czd_A 108 MS 109 (208)
T ss_dssp CC
T ss_pred cC
Confidence 43
No 413
>3ivz_A Nitrilase; alpha-beta sandwich, hydrolase; 1.57A {Pyrococcus abyssi} SCOP: d.160.1.2 PDB: 3iw3_A 3ki8_A 3klc_A 1j31_A
Probab=24.28 E-value=2.7e+02 Score=24.12 Aligned_cols=46 Identities=17% Similarity=0.190 Sum_probs=31.1
Q ss_pred HHHHHHHhCCCEEEEecCCcC---CCCHHHHHHhhH-----HHHHHHHHHHHhh
Q 016596 231 YVQYQADNGAQAVQIFDSWAT---ELSPVDFEEFSL-----PYLKQIVDTVKQT 276 (386)
Q Consensus 231 ~~~~~~e~G~d~i~i~d~~~~---~iSp~~f~ef~~-----P~~k~l~~~i~~~ 276 (386)
+++...+.|+|.|.+.+.+-+ +-+.+.+.++.. |..+.+.+..+++
T Consensus 26 ~i~~A~~~gadlvvfPE~~~~gy~~~~~~~~~~~a~~~~~~~~~~~l~~~a~~~ 79 (262)
T 3ivz_A 26 LIKEASKQGAQLVVLPELFDTGYNFETREEVFEIAQKIPEGETTTFLMDVARDT 79 (262)
T ss_dssp HHHHHHHTTCSEEECCTTTTTCSCCSCHHHHHHHCBCTTTSHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCCEEEeCCCcccCCCCCCHHHHHHhcCccCCCHHHHHHHHHHHHc
Confidence 334455679999998886543 234455666655 7788888888776
No 414
>4dnh_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati YORK structural genomics research consortium; 2.50A {Sinorhizobium meliloti}
Probab=24.27 E-value=1.1e+02 Score=28.32 Aligned_cols=60 Identities=13% Similarity=0.268 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCCEEEEec-CCc-CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC
Q 016596 221 LRKFTTSMAKYVQYQADNGAQAVQIFD-SWA-TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS 289 (386)
Q Consensus 221 l~~~~~~~~~~~~~~~e~G~d~i~i~d-~~~-~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~ 289 (386)
++.+.+...+.+....++|+.+|.++. ..+ .-=||+.|.+. +.+++..+. -|+|+|--|.
T Consensus 132 l~~V~~AY~EQ~~~Ve~~G~~~ILMASRaLA~~A~~pdDY~~V----Y~~vL~q~~-----~PVILHWLG~ 193 (396)
T 4dnh_A 132 IDDILAAYESQIEAIEAEGGRIILMASRALAAAAKGPEDYIRV----YDRVLSQVK-----EPVIIHWLGE 193 (396)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCEEECCCHHHHHHCCSHHHHHHH----HHHHHHHCS-----SCEEEEEECT
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEEehhHHHHHHhCCHHHHHHH----HHHHHHhcC-----CCEEEEeccc
Confidence 444555555666666778999887543 121 25789998874 456777764 4899997663
No 415
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=23.95 E-value=2.7e+02 Score=26.94 Aligned_cols=126 Identities=12% Similarity=0.035 Sum_probs=74.5
Q ss_pred HHHHHHHHhCCCEEEEec-CCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-c--hHHHHHhcCCCEEE
Q 016596 230 KYVQYQADNGAQAVQIFD-SWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-G--LLERLALTGVDVVS 305 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d-~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-~--~l~~l~e~g~d~l~ 305 (386)
+-++..++.|++.|-+-. +..++ +++ ....+++...+.. +.+ +-+.|.+ + .+..+.++ ++++-
T Consensus 168 eE~~~A~~lga~iIGinnr~L~t~-~~d------l~~~~~L~~~ip~---~~~--vIaEsGI~t~edv~~~~~~-a~avL 234 (452)
T 1pii_A 168 EEQERAIALGAKVVGINNRDLRDL-SID------LNRTRELAPKLGH---NVT--VISESGINTYAQVRELSHF-ANGFL 234 (452)
T ss_dssp HHHHHHHHTTCSEEEEESEETTTT-EEC------THHHHHHHHHHCT---TSE--EEEESCCCCHHHHHHHTTT-CSEEE
T ss_pred HHHHHHHHCCCCEEEEeCCCCCCC-CCC------HHHHHHHHHhCCC---CCe--EEEECCCCCHHHHHHHHHh-CCEEE
Confidence 344556688999887643 22232 211 3344566666643 333 3334433 3 37788888 99887
Q ss_pred cCCC----CCHHHH-HHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHH
Q 016596 306 LDWT----VDMAEG-RRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEV 380 (386)
Q Consensus 306 ~d~~----~dl~e~-~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a 380 (386)
+.+. .|+.++ ++.+.+++-|+| .-++|++...+.--.+ -.|||+.+ .-|..+++|..+.+.+.
T Consensus 235 VGealmr~~d~~~~~~~l~~~~~KICG-------it~~eda~~a~~~Gad---~iGfIf~~--~SpR~V~~~~a~~i~~~ 302 (452)
T 1pii_A 235 IGSALMAHDDLHAAVRRVLLGENKVCG-------LTRGQDAKAAYDAGAI---YGGLIFVA--TSPRCVNVEQAQEVMAA 302 (452)
T ss_dssp ECHHHHTCSCHHHHHHHHHHCSCEECC-------CCSHHHHHHHHHHTCS---EEEEECCT--TCTTBCCHHHHHHHHHH
T ss_pred EcHHHcCCcCHHHHHHHHHHHhccccC-------CCcHHHHHHHHhcCCC---EEEeecCC--CCCCCCCHHHHHHHHhc
Confidence 7643 577655 444556677777 4567777655443222 25999865 34667888888887654
No 416
>3cny_A Inositol catabolism protein IOLE; xylose isomerase-like TIM barrel, structural genomics, joint for structural genomics, JCSG; 1.85A {Lactobacillus plantarum WCFS1}
Probab=23.93 E-value=3.5e+02 Score=23.38 Aligned_cols=99 Identities=11% Similarity=-0.068 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecC--C--cCC---CC------HHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDS--W--ATE---LS------PVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG 290 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~--~--~~~---iS------p~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~ 290 (386)
..+.+.+.++...+.|++.+.+... + +.. ++ .+.-.+.+...++++.+.++++ |+.+.+|.+...
T Consensus 88 ~~~~~~~~i~~a~~lG~~~v~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--gv~l~lE~~~~~ 165 (301)
T 3cny_A 88 ASEAFEKHCQYLKAINAPVAVVSEQTYTIQRSDTANIFKDKPYFTDKEWDEVCKGLNHYGEIAAKY--GLKVAYHHHMGT 165 (301)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECTTCCTTCSSCCTTTCCCCCCHHHHHHHHHHHHHHHHHHHHT--TCEEEEECCTTS
T ss_pred HHHHHHHHHHHHHHcCCCEEEecCCCccccCcccCCcccccccCcHHHHHHHHHHHHHHHHHHHHc--CCEEEEecCCCc
Confidence 4455556666777889998876531 1 111 11 3344456778899999999987 688889887531
Q ss_pred ---c--hH-HHHHhcCCC--EEEcCC------CCCHHHHHHHhCCCee
Q 016596 291 ---G--LL-ERLALTGVD--VVSLDW------TVDMAEGRRRLGPDVA 324 (386)
Q Consensus 291 ---~--~l-~~l~e~g~d--~l~~d~------~~dl~e~~~~~g~~~~ 324 (386)
+ .+ ..+.+++.. .+.+|. ..|+.+..+++++++.
T Consensus 166 ~~~~~~~~~~l~~~~~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~ 213 (301)
T 3cny_A 166 GIQTKEETDRLMANTDPKLVGLLYDTGHIAVSDGDYMALLNAHIDRVV 213 (301)
T ss_dssp SSCSHHHHHHHHHTSCTTTCEEEEEHHHHHHHHSCSHHHHHHHGGGEE
T ss_pred ccCCHHHHHHHHHhCCccceeEEechHHHHHcCCCHHHHHHHHHhhee
Confidence 1 23 344445532 334442 1477777777877654
No 417
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=23.90 E-value=4.4e+02 Score=24.44 Aligned_cols=62 Identities=15% Similarity=0.093 Sum_probs=39.3
Q ss_pred HHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC--------C-C---HHHHHHHhCCCeeE--EecCC
Q 016596 268 QIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT--------V-D---MAEGRRRLGPDVAV--QGNVD 330 (386)
Q Consensus 268 ~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~--------~-d---l~e~~~~~g~~~~l--~G~vd 330 (386)
+.++.+++.. +.|+++-.+-+........+.|+|++.+.+. . + +.++++.+++++.+ .|||.
T Consensus 207 ~~i~~lr~~~-~~PvivK~v~~~e~A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~~ipVia~GGI~ 282 (352)
T 3sgz_A 207 NDLSLLQSIT-RLPIILKGILTKEDAELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKGKIEVYMDGGVR 282 (352)
T ss_dssp HHHHHHHHHC-CSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTTSSEEEEESSCC
T ss_pred HHHHHHHHhc-CCCEEEEecCcHHHHHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCCCCeEEEECCCC
Confidence 4577777765 5788888774433456778899999876321 1 1 45666667655444 56663
No 418
>3cqj_A L-ribulose-5-phosphate 3-epimerase ULAE; TIM-barrel, isomerase, phosphate-binding motif; 2.04A {Escherichia coli} PDB: 3cqi_A 3cqh_A 3cqk_A
Probab=23.75 E-value=3.6e+02 Score=23.40 Aligned_cols=154 Identities=17% Similarity=0.152 Sum_probs=84.3
Q ss_pred HHHHHHHHHHHHHHhCCCEEEEecCCc-CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCc-----ch-HHHH
Q 016596 224 FTTSMAKYVQYQADNGAQAVQIFDSWA-TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSG-----GL-LERL 296 (386)
Q Consensus 224 ~~~~~~~~~~~~~e~G~d~i~i~d~~~-~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~-----~~-l~~l 296 (386)
..+.+.+.++...+.|++.+.+..... .-.+.+...+.+...++++.+.+++. |+.+.+|.+... .. ...+
T Consensus 106 ~~~~~~~~i~~A~~lG~~~v~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~a~~~--Gv~l~lEn~~~~~~~~~~~~~~l~ 183 (295)
T 3cqj_A 106 GLEIMRKAIQFAQDVGIRVIQLAGYDVYYQEANNETRRRFRDGLKESVEMASRA--QVTLAMEIMDYPLMNSISKALGYA 183 (295)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEECCCSCSSSCCCHHHHHHHHHHHHHHHHHHHHH--TCEEEEECCSSGGGCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCCCCcCcCHHHHHHHHHHHHHHHHHHHHHh--CCEEEEeeCCCcccCCHHHHHHHH
Confidence 334455566667778999887642111 01233444455677889999999887 678889887642 11 2344
Q ss_pred HhcCCC--EEEcC------CCCCHHHHHHHhCCCeeE---EecCCcC---c--c-CCCHHHHHHHHHHHHHHcC-CCCeE
Q 016596 297 ALTGVD--VVSLD------WTVDMAEGRRRLGPDVAV---QGNVDPG---A--L-FGSKDFITNRINDTVRKAG-RWKHI 358 (386)
Q Consensus 297 ~e~g~d--~l~~d------~~~dl~e~~~~~g~~~~l---~G~vd~~---~--l-~gt~eev~~~v~~~i~~~~-~~g~I 358 (386)
.+++.. .+.+| ...|+.+.-+.+++++.. ..+ .+. . + .|+.+ -+.+.+.|+..+ .|.++
T Consensus 184 ~~v~~~~vg~~~D~~h~~~~g~d~~~~l~~~~~~i~~vHl~D~-~~g~~~~~p~G~G~id--~~~~~~~L~~~gy~g~i~ 260 (295)
T 3cqj_A 184 HYLNNPWFQLYPDIGNLSAWDNDVQMELQAGIGHIVAVHVKDT-KPGVFKNVPFGEGVVD--FERCFETLKQSGYCGPYL 260 (295)
T ss_dssp HHHCCTTEEEECBHHHHHSSSCCHHHHHHHTGGGBCCEEECEE-ETTEEEEECTTSSSCC--HHHHHHHHHHTTCCSCEE
T ss_pred HhcCCCCeEEEeccchHhhcCCCHHHHHHHhccceEEEEeecC-CCCccCCcCCCCCccC--HHHHHHHHHHCCCceeEE
Confidence 445432 23334 235777776767766432 221 121 1 2 34432 345556666666 55555
Q ss_pred EecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 359 LNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 359 ls~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
+=.-.. ....|.|.++.-++..++
T Consensus 261 lE~~~~-~~~~~~~~~~~s~~~l~~ 284 (295)
T 3cqj_A 261 IEMWSE-TAEDPAAEVAKARDWVKA 284 (295)
T ss_dssp ECCCGG-GSSCHHHHHHHHHHHHHH
T ss_pred EEecCC-CCCCHHHHHHHHHHHHHH
Confidence 533211 125567777766665554
No 419
>4dyk_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO PSI-biology, NEW YORK structural genomics research consorti hydrolase; 2.00A {Pseudomonas aeruginosa}
Probab=23.41 E-value=1.9e+02 Score=27.02 Aligned_cols=51 Identities=2% Similarity=-0.006 Sum_probs=30.9
Q ss_pred CCCHHHHHHHHHHHHHHcC-CCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 335 FGSKDFITNRINDTVRKAG-RWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~-~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
..+.++..+++.++++... .+..-+..+-.-++..++|.++++++.++++|
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~~A~~~g 215 (451)
T 4dyk_A 164 ARDSAEAIRQGMALFDDLKHHPRIRIAFGPHAPYTVSDDKLEQILVLTEELD 215 (451)
T ss_dssp BSSHHHHHHHHHHHHHHTTTCSSEEEEEEECCGGGSCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHhcCCCceEEEEecCCCCccCHHHHHHHHHHHHHcC
Confidence 3456666677777777654 23332332223344557788888888888876
No 420
>3cjp_A Predicted amidohydrolase, dihydroorotase family; structural genomics, protein structure initiative; 1.85A {Clostridium acetobutylicum atcc 824}
Probab=23.36 E-value=3.2e+02 Score=23.45 Aligned_cols=66 Identities=14% Similarity=0.098 Sum_probs=38.9
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcCCCCe-EEecCCCCCCCCcHHHHHHHHHHHHhh-c
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAGRWKH-ILNLGHGIKVGTPEENVAHFFEVAKAI-R 385 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~~~g~-Ils~gc~i~~~tp~Eni~a~~~a~~~y-g 385 (386)
+.++.++++++..-+|.+|+.. ..++..++++++++..+=.|. .++.+ .+ ..+.+..+++.+.++ |
T Consensus 77 ~~~~~~~~p~~~~~~g~~p~~~---~~~~~~~el~~~~~~~g~~gi~~~g~~----~~-~~~~~~~~~~~a~~~~~ 144 (272)
T 3cjp_A 77 LTNVIQAYPSRYVGFGNVPVGL---SENDTNSYIEENIVNNKLVGIGELTPA----SG-QIKSLKPIFKYSMDSGS 144 (272)
T ss_dssp HHHHHHHSTTTEEEEECCCTTC---CHHHHHHHHHHHTTTTTCSEEEEECCC----TT-CGGGGHHHHHHHHHTTC
T ss_pred HHHHHHhCCCeEEEEEEeCCCC---CcHHHHHHHHHHHHhcCceEEEecCCC----CC-ccHHHHHHHHHHHhccC
Confidence 3455667888777788777642 235566667776654431222 22222 12 445678888888887 5
No 421
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=23.00 E-value=3.6e+02 Score=23.91 Aligned_cols=61 Identities=30% Similarity=0.330 Sum_probs=38.2
Q ss_pred HHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcCCCEEEcCC
Q 016596 233 QYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTGVDVVSLDW 308 (386)
Q Consensus 233 ~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d~ 308 (386)
+...++|+|+|.+ |. ++|+ .++++++.+++..+.+ -+-.-|..+ .+..+.+.|+|.+++..
T Consensus 196 ~~A~~aGaD~I~l-d~----~~~~--------~l~~~v~~l~~~~~~~--~i~AsGGI~~~ni~~~~~aGaD~i~vGs 258 (273)
T 2b7n_A 196 KNAMNAGADIVMC-DN----LSVL--------ETKEIAAYRDAHYPFV--LLEASGNISLESINAYAKSGVDAISVGA 258 (273)
T ss_dssp HHHHHHTCSEEEE-ET----CCHH--------HHHHHHHHHHHHCTTC--EEEEESSCCTTTHHHHHTTTCSEEECTH
T ss_pred HHHHHcCCCEEEE-CC----CCHH--------HHHHHHHHhhccCCCc--EEEEECCCCHHHHHHHHHcCCcEEEEcH
Confidence 3344679999886 33 4554 4445555555432223 344556655 48999999999998753
No 422
>2iw0_A Chitin deacetylase; hydrolase, chitin DE-N-acetylase, family 4 carbohydrate ESTE; 1.81A {Colletotrichum lindemuthianum} SCOP: c.6.2.3
Probab=22.81 E-value=2.3e+02 Score=24.65 Aligned_cols=69 Identities=10% Similarity=-0.047 Sum_probs=35.8
Q ss_pred HHHHHHHHhCCCEEEEecCC-----cCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEE--ecCCcc--hHHHHHhcC
Q 016596 230 KYVQYQADNGAQAVQIFDSW-----ATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILY--ASGSGG--LLERLALTG 300 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~-----~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H--~cG~~~--~l~~l~e~g 300 (386)
+.++.+.+.|-+ |+.+. -.-+|++.+++=+....+.+-+.. |.+..++ -.|..+ .++.+.+.|
T Consensus 89 ~~lr~i~~~Ghe---Ig~Ht~~H~~l~~ls~~~~~~ei~~~~~~l~~~~-----G~~~~~fr~P~G~~~~~~~~~l~~~G 160 (254)
T 2iw0_A 89 DTIRRMRADGHL---VGSHTYAHPDLNTLSSADRISQMRQLEEATRRID-----GFAPKYMRAPYLSCDAGCQGDLGGLG 160 (254)
T ss_dssp HHHHHHHHTTCE---EEECCSSCCCGGGSCHHHHHHHHHHHHHHHHHHH-----SCEESEECCGGGCCCHHHHHHHHHTT
T ss_pred HHHHHHHHCCCE---EEeeccCCCCcccCCHHHHHHHHHHHHHHHHHHh-----CCCCCEEECCCCCCCHHHHHHHHHcC
Confidence 345556677733 23322 125788877665554444433333 2332222 245554 367777888
Q ss_pred CCEEEc
Q 016596 301 VDVVSL 306 (386)
Q Consensus 301 ~d~l~~ 306 (386)
...+.|
T Consensus 161 ~~~v~w 166 (254)
T 2iw0_A 161 YHIIDT 166 (254)
T ss_dssp CEEECC
T ss_pred CeEEEe
Confidence 766543
No 423
>4dzh_A Amidohydrolase; adenosine deaminase, nysgrc, structural GENO YORK structural genomics research consortium; 1.55A {Xanthomonas campestris PV}
Probab=22.68 E-value=2.7e+02 Score=26.34 Aligned_cols=51 Identities=10% Similarity=-0.061 Sum_probs=33.2
Q ss_pred CCCHHHHHHHHHHHHHHcC-CCCeEEecCCCCCCCCcHHHHHHHHHHHHhhc
Q 016596 335 FGSKDFITNRINDTVRKAG-RWKHILNLGHGIKVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~-~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~yg 385 (386)
..++++..++++++++... .+..-++.+-..++..++|.++++++.++++|
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~~A~~~g 222 (472)
T 4dzh_A 171 ASSDDEYFARAGELHDQWRDDPLISTAFAPHAPYTVNDANFERVRMLADQLD 222 (472)
T ss_dssp CSSHHHHHHHHHHHHHHHTTCSSEEEEEEECCTTTSCHHHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHHHHhCCCCceEEEEecCCCCCCCHHHHHHHHHHHHHCC
Confidence 4566777777788877765 22222222223345667888999999998886
No 424
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=22.59 E-value=2.5e+02 Score=26.19 Aligned_cols=62 Identities=6% Similarity=0.052 Sum_probs=37.5
Q ss_pred HHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC---------C---CHHHHHHHhCCC--eeEEecC
Q 016596 267 KQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT---------V---DMAEGRRRLGPD--VAVQGNV 329 (386)
Q Consensus 267 k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~---------~---dl~e~~~~~g~~--~~l~G~v 329 (386)
.+.++.+++.. +.|+++-..-.......+.+.|+|++.+... . -+.++++.++++ +...|||
T Consensus 218 ~~~i~~lr~~~-~~PvivK~v~~~e~a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~~ipVia~GGI 293 (368)
T 2nli_A 218 PRDIEEIAGHS-GLPVFVKGIQHPEDADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNKRVPIVFDSGV 293 (368)
T ss_dssp HHHHHHHHHHS-SSCEEEEEECSHHHHHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTTSSCEEECSSC
T ss_pred HHHHHHHHHHc-CCCEEEEcCCCHHHHHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCCCCeEEEECCC
Confidence 34577777764 5688877442222457778899999877431 1 245667777654 3335555
No 425
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=22.37 E-value=4.2e+02 Score=23.64 Aligned_cols=138 Identities=12% Similarity=0.122 Sum_probs=72.0
Q ss_pred HHHHHHHHHhCCCEEEEe--cCCcC-CCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc-hH---HHHHhcCC
Q 016596 229 AKYVQYQADNGAQAVQIF--DSWAT-ELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG-LL---ERLALTGV 301 (386)
Q Consensus 229 ~~~~~~~~e~G~d~i~i~--d~~~~-~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~-~l---~~l~e~g~ 301 (386)
.+-+.+..++||..+.+. |+-+. -.+|+.|+++ ++.+++..++. ++..+.|... .. ..+.++..
T Consensus 33 a~~A~~~~~AGAaivHlHvRd~~G~~s~d~~~~~e~--------~~~IR~~~pd~-ii~~Ttg~~~~~~e~R~~~~~~~P 103 (275)
T 3no5_A 33 VESTQAAFEAGATLVHLHVRNDDETPTSNPDRFALV--------LEGIRKHAPGM-ITQVSTGGRSGAGNERGAMLSLRP 103 (275)
T ss_dssp HHHHHHHHHHTCCEEEECEECTTSCEECCHHHHHHH--------HHHHHHHSTTC-EEEECCCCCTTCCGGGGTTGGGCC
T ss_pred HHHHHHHHHccCcEEEEeecCCCCCcCCCHHHHHHH--------HHHHHHhCCCe-EEEeCCCCCCCCHHHHhhHhhcCC
Confidence 344455779999999886 43343 5788888774 55666654343 3444444221 11 12234445
Q ss_pred CEEEcCCC----------CC---HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC-CCC----eEEecCC
Q 016596 302 DVVSLDWT----------VD---MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG-RWK----HILNLGH 363 (386)
Q Consensus 302 d~l~~d~~----------~d---l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~-~~g----~Ils~gc 363 (386)
+..+++-. .. +.+..+.+.. -||-|..---++..+.. ++++++.+- .+. |+|+-..
T Consensus 104 e~aSl~~gs~Nf~~~v~~N~~~~~~~~~~~~~e-----~Gi~pE~e~fd~g~l~~-~~~l~~~Gl~~~p~~~~~vlGv~~ 177 (275)
T 3no5_A 104 DMASLATGSVNFPTRVYDNPPELVDWLAAEMKT-----YGIKPEVEAFDLSMIFQ-AAAMQAAGAIVGPLHIQFVMGIKN 177 (275)
T ss_dssp SEEEEECSCEECSSSEECCCHHHHHHHHHHHHH-----TTCEEEEEESSTHHHHH-HHHHHHHTSSCSSCEEEEEECCTT
T ss_pred CEEEecCcccccccccccCCHHHHHHHHHHHHH-----cCCeeEEEEEcHHHHHH-HHHHHHCCCCCCCeeEEEEeCCCC
Confidence 55553211 12 3333333322 24555543223444444 456777654 333 4444333
Q ss_pred CCCCCCcHHHHHHHHHHHHh
Q 016596 364 GIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 364 ~i~~~tp~Eni~a~~~a~~~ 383 (386)
++| ..++++.+|++.+++
T Consensus 178 g~~--~~~~~l~~~~~~l~~ 195 (275)
T 3no5_A 178 AMP--VDREVLEFYVQTLKR 195 (275)
T ss_dssp SCC--CCHHHHHHHHHHHHH
T ss_pred CCC--CCHHHHHHHHHHHHh
Confidence 444 468899999988754
No 426
>2hjp_A Phosphonopyruvate hydrolase; phosporus-Ca cleavage, PEP mutase/isocitrate lyase superfamily; HET: XYS PPR; 1.90A {Variovorax SP} PDB: 2dua_A* 2hrw_A
Probab=21.93 E-value=2.2e+02 Score=25.65 Aligned_cols=69 Identities=17% Similarity=0.168 Sum_probs=42.8
Q ss_pred HHHHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe-cCCcchHHHHHhcC-CCE
Q 016596 226 TSMAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA-SGSGGLLERLALTG-VDV 303 (386)
Q Consensus 226 ~~~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~-cG~~~~l~~l~e~g-~d~ 303 (386)
+-.++-++++.++|||.|++-- ..-+++.. +++.+.++. .+|++..+ .+...-.+.|.++| +..
T Consensus 166 ~~ai~Ra~ay~eAGAd~i~~e~---~~~~~~~~--------~~i~~~~~~---~vP~i~n~~~~~~~~~~eL~~lG~v~~ 231 (290)
T 2hjp_A 166 QEAVRRGQAYEEAGADAILIHS---RQKTPDEI--------LAFVKSWPG---KVPLVLVPTAYPQLTEADIAALSKVGI 231 (290)
T ss_dssp HHHHHHHHHHHHTTCSEEEECC---CCSSSHHH--------HHHHHHCCC---SSCEEECGGGCTTSCHHHHHTCTTEEE
T ss_pred HHHHHHHHHHHHcCCcEEEeCC---CCCCHHHH--------HHHHHHcCC---CCCEEEeccCCCCCCHHHHHhcCCeeE
Confidence 4556677789999999998622 12345554 445555532 26766532 13211368999999 888
Q ss_pred EEcCC
Q 016596 304 VSLDW 308 (386)
Q Consensus 304 l~~d~ 308 (386)
+++..
T Consensus 232 v~~~~ 236 (290)
T 2hjp_A 232 VIYGN 236 (290)
T ss_dssp EEECS
T ss_pred EEech
Confidence 87764
No 427
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.78 E-value=1.3e+02 Score=25.44 Aligned_cols=85 Identities=9% Similarity=-0.008 Sum_probs=51.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcchHHHHHhcCCCEEEcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGLLERLALTGVDVVSLDWT 309 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~l~~l~e~g~d~l~~d~~ 309 (386)
+.+++.++.|++.|.+-+.. ++++.+.+.+ +++. +.. +.+++++ ..++...++|++.+++...
T Consensus 17 ~~~~~a~~~Gv~~v~lr~k~---~~~~~~~~~i----~~l~---~~~--~~~livn-----d~~~~A~~~gadgvhl~~~ 79 (210)
T 3ceu_A 17 KIITALFEEGLDILHLRKPE---TPAMYSERLL----TLIP---EKY--HRRIVTH-----EHFYLKEEFNLMGIHLNAR 79 (210)
T ss_dssp HHHHHHHHTTCCEEEECCSS---CCHHHHHHHH----HHSC---GGG--GGGEEES-----SCTTHHHHTTCSEEECCSS
T ss_pred HHHHHHHHCCCCEEEEccCC---CCHHHHHHHH----HHHH---HHh--CCeEEEe-----CCHHHHHHcCCCEEEECcc
Confidence 45667788999999987543 5676666542 3333 222 4566664 2346677889998887532
Q ss_pred ----------------CCHHHHHHH-hCCCeeEEecCCc
Q 016596 310 ----------------VDMAEGRRR-LGPDVAVQGNVDP 331 (386)
Q Consensus 310 ----------------~dl~e~~~~-~g~~~~l~G~vd~ 331 (386)
.+..++.+. .|-+....|.+-|
T Consensus 80 ~~~~~~~~~~~ig~s~~t~~e~~~A~~GaDyv~~g~vf~ 118 (210)
T 3ceu_A 80 NPSEPHDYAGHVSCSCHSVEEVKNRKHFYDYVFMSPIYD 118 (210)
T ss_dssp SCSCCTTCCSEEEEEECSHHHHHTTGGGSSEEEECCCC-
T ss_pred ccccccccCCEEEEecCCHHHHHHHhhCCCEEEECCcCC
Confidence 255665432 5555666666543
No 428
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=21.75 E-value=40 Score=30.96 Aligned_cols=75 Identities=12% Similarity=0.181 Sum_probs=38.6
Q ss_pred HhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEecC-CcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecC
Q 016596 210 AFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFDS-WATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASG 288 (386)
Q Consensus 210 l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d~-~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG 288 (386)
+|.+||.+.++.+. .|+|.+-++-. .-+...|+---++=. ++++.+++.- .+|.++|-.-
T Consensus 151 ~yT~Peea~~Fv~~--------------TgvD~LAvaiGt~HG~Yk~~g~p~L~~----~~L~~I~~~~-~vpLVlHGgS 211 (305)
T 1rvg_A 151 LLTNPEEARIFMER--------------TGADYLAVAIGTSHGAYKGKGRPFIDH----ARLERIARLV-PAPLVLHGAS 211 (305)
T ss_dssp TCCCHHHHHHHHHH--------------HCCSEEEECSSCCSSSBCSSSSCCCCH----HHHHHHHHHC-CSCEEECSCC
T ss_pred ccCCHHHHHHHHHH--------------HCCCEEEEecCccccccCCCCCCccCH----HHHHHHHHhc-CCCEEEeCCC
Confidence 68999988877665 48897665432 112222110001112 2344444443 4788888644
Q ss_pred Ccc--hHHHHHhcCCCE
Q 016596 289 SGG--LLERLALTGVDV 303 (386)
Q Consensus 289 ~~~--~l~~l~e~g~d~ 303 (386)
... +++.+.++|-++
T Consensus 212 sv~~~~~~~~~~~gg~~ 228 (305)
T 1rvg_A 212 AVPPELVERFRASGGEI 228 (305)
T ss_dssp CCCHHHHHHHHHTTCCC
T ss_pred CCcHHHHHHHHhhcccc
Confidence 222 245555555443
No 429
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=21.71 E-value=5.8e+02 Score=25.86 Aligned_cols=145 Identities=12% Similarity=0.100 Sum_probs=71.6
Q ss_pred HHHHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch----HHHHHhcCCCE
Q 016596 228 MAKYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL----LERLALTGVDV 303 (386)
Q Consensus 228 ~~~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~----l~~l~e~g~d~ 303 (386)
-+++++.+.++|++.|=.+-|. .||..|+. .+++.+.... -.+..+..++-..... ++.+.+.+.+.
T Consensus 95 Kl~Ia~~L~~lGVd~IEaGfP~---asp~D~e~-----v~~i~~~~l~-~~~~~i~aL~r~~~~did~a~eal~~a~~~~ 165 (644)
T 3hq1_A 95 KRRMFDLLVRMGYKEIEVGFPS---ASQTDFDF-----VREIIEQGAI-PDDVTIQVLTQCRPELIERTFQACSGAPRAI 165 (644)
T ss_dssp HHHHHHHHHHHTCSEEEEECTT---TCHHHHHH-----HHHHHHTTCS-CTTCEEEEEEESCHHHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHHHcCCCEEEEeCCC---CChhHHHH-----HHHHHhcCCC-CCCeEEEEEecCCHhhHHHHHHHHhcCCCCE
Confidence 3466777889999998765544 46776653 3444433110 0123333333211112 34555677666
Q ss_pred EEcCC-----------CCCHHHHHHH----------hCCC---eeEEecCCcCcc-CCCHHHHHHHHHHHHHHcCCCCe-
Q 016596 304 VSLDW-----------TVDMAEGRRR----------LGPD---VAVQGNVDPGAL-FGSKDFITNRINDTVRKAGRWKH- 357 (386)
Q Consensus 304 l~~d~-----------~~dl~e~~~~----------~g~~---~~l~G~vd~~~l-~gt~eev~~~v~~~i~~~~~~g~- 357 (386)
+++.. ..+.++..+. ++.. +.+.--+++... ..++|.+.+-++.+++.+..|--
T Consensus 166 Vhif~stSd~h~~~~l~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~eaG~~Gad~ 245 (644)
T 3hq1_A 166 VHFYNSTSILQRRVVFRANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAPTPER 245 (644)
T ss_dssp EEEEEECCHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHHHCCCSSS
T ss_pred EEEEecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHhcCCCCCc
Confidence 65521 2344433332 1111 111112333333 46777777777777776653332
Q ss_pred --EEecCCCCCCCCcHHHHHHHHHHHH
Q 016596 358 --ILNLGHGIKVGTPEENVAHFFEVAK 382 (386)
Q Consensus 358 --Ils~gc~i~~~tp~Eni~a~~~a~~ 382 (386)
+++....+-..+|. .+..+++..+
T Consensus 246 ~~~I~LpDTvG~~tP~-~~~~li~~l~ 271 (644)
T 3hq1_A 246 PIIFNLPATVEMTTPN-VYADSIEWMS 271 (644)
T ss_dssp CEEEEEEESSCCSCHH-HHHHHHHHHH
T ss_pred eeEEEecCCCcccCHH-HHHHHHHHHH
Confidence 56655555444444 4555555554
No 430
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=21.68 E-value=4.5e+02 Score=23.75 Aligned_cols=71 Identities=10% Similarity=0.029 Sum_probs=39.1
Q ss_pred hCCceeEEeecCcH-----HHHHHHHHcCCCchhHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEEEec
Q 016596 174 VNNEAAVLGFVGAP-----FTLASYVVEGGSSKHFSKIKRLAFSQPKVLHALLRKFTTSMAKYVQYQADNGAQAVQIFD 247 (386)
Q Consensus 174 ~g~~~~v~~~~~gP-----ft~a~~l~~g~~~~~~~~~~~~l~~~Pe~v~~ll~~~~~~~~~~~~~~~e~G~d~i~i~d 247 (386)
.|-++||+.++..+ +..+..+.|-...+.+.+.+...-++|+.+++ .-.++..+.++.+.+.|++++.+.-
T Consensus 198 ~Gi~vPIi~GImPi~s~~~~~~~~~~~Gv~iP~~l~~~l~~~~~d~~~~~~---~gi~~a~e~~~~L~~~gv~GiH~yt 273 (310)
T 3apt_A 198 AGIGIPILPGIMPVTSYRQLRRFTEVCGASIPGPLLAKLERHQDDPKAVLE---IGVEHAVRQVAELLEAGVEGVHFYT 273 (310)
T ss_dssp TTCCSCEECEECCCCCTTHHHHHHHTSCCCCCHHHHHHHHHSTTCHHHHHH---HHHHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCCCeEEEEecccCCHHHHHHHHHcCCCCCCHHHHHHHHhccCCHHHHHH---HHHHHHHHHHHHHHHCCCCeEEEeC
Confidence 35568988776633 22333444322223343333333345664433 3445666677778888999998754
No 431
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=21.54 E-value=3.5e+02 Score=23.46 Aligned_cols=18 Identities=22% Similarity=0.222 Sum_probs=8.4
Q ss_pred HHHHHHHHHHcC--CCCeEE
Q 016596 342 TNRINDTVRKAG--RWKHIL 359 (386)
Q Consensus 342 ~~~v~~~i~~~~--~~g~Il 359 (386)
.+.+++.++.+. |-.+|.
T Consensus 112 ~~~~~~~i~~A~~lG~~~v~ 131 (290)
T 2zvr_A 112 IERVVKHTEVAGMFGALVII 131 (290)
T ss_dssp HHHHHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEE
Confidence 344555555443 434444
No 432
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=21.52 E-value=2.7e+02 Score=28.30 Aligned_cols=88 Identities=9% Similarity=0.022 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHh---CCC---EEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcch-H-HHH-
Q 016596 226 TSMAKYVQYQADN---GAQ---AVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGGL-L-ERL- 296 (386)
Q Consensus 226 ~~~~~~~~~~~e~---G~d---~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~~-l-~~l- 296 (386)
++.++.++++.++ |++ .|.+.|..+ .+.|..+.+.+. .+.+.+... .+.++-+|++.+... + ..+
T Consensus 226 dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG-~~tP~~~~~li~----~l~~~v~~~-~~v~l~vH~HND~GlAvANsla 299 (644)
T 3hq1_A 226 EYAKQVCDAVGEVIAPTPERPIIFNLPATVE-MTTPNVYADSIE----WMSRNLANR-ESVILSLHPHNDRGTAVAAAEL 299 (644)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCEEEEEEESSC-CSCHHHHHHHHH----HHHHHSTTG-GGEEEEEEEBCTTSCHHHHHHH
T ss_pred HHHHHHHHHHHHhcCCCCCceeEEEecCCCc-ccCHHHHHHHHH----HHHHhcccc-cCceEEEecCCCCCcHHHHHHH
Confidence 5566667777775 577 577777655 688888777542 233333211 135788999887652 2 333
Q ss_pred -HhcCCCEEEc-----CC---CCCHHHHHHHh
Q 016596 297 -ALTGVDVVSL-----DW---TVDMAEGRRRL 319 (386)
Q Consensus 297 -~e~g~d~l~~-----d~---~~dl~e~~~~~ 319 (386)
.+.|++.+.- .+ ..+++++.-.+
T Consensus 300 Av~AGA~~Vdgti~G~GERaGNa~LE~lv~~L 331 (644)
T 3hq1_A 300 GFAAGADRIEGCLFGNGERTGNVCLVTLGLNL 331 (644)
T ss_dssp HHHTTCCEEEEBGGGCSSTTCBCBHHHHHHHH
T ss_pred HHHhCCCEEEecCCCCCccccCccHHHHHHHH
Confidence 4679988752 22 25777665544
No 433
>3b9o_A Alkane monoxygenase; LADA, alkane hydroxylase, monooxygenase, plasmid, oxidoreductase; HET: FMN; 1.90A {Geobacillus thermodenitrificans} PDB: 3b9n_A*
Probab=21.49 E-value=94 Score=29.88 Aligned_cols=42 Identities=17% Similarity=0.148 Sum_probs=31.3
Q ss_pred cCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHH
Q 016596 334 LFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVA 381 (386)
Q Consensus 334 l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~ 381 (386)
+.||||+|.+.+++..+..+-.+|+|.+.. .++.+..+.+.|
T Consensus 352 ~vGtpe~Vad~L~~~~~~~G~d~~~l~~~~------~~~~l~~fa~~V 393 (440)
T 3b9o_A 352 SVGTPKKVADEMQYLVEEAGIDGFNLVQYV------SPGTFVDFIELV 393 (440)
T ss_dssp EEECHHHHHHHHHHHHHHHCCCEEEEECSS------TTHHHHHHHHHH
T ss_pred EEECHHHHHHHHHHHHHhcCCCEEEEcCCC------CHHHHHHHHHhh
Confidence 479999999999999998774488887532 356666665543
No 434
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=21.44 E-value=4.2e+02 Score=24.60 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=48.3
Q ss_pred CHHHHHHHHHHHHHH------------HHHHHHHHHHhCCCEEEEec-CC-cCCCCHHHHHHhhHHHHHHHHHHHHhhCC
Q 016596 213 QPKVLHALLRKFTTS------------MAKYVQYQADNGAQAVQIFD-SW-ATELSPVDFEEFSLPYLKQIVDTVKQTHP 278 (386)
Q Consensus 213 ~Pe~v~~ll~~~~~~------------~~~~~~~~~e~G~d~i~i~d-~~-~~~iSp~~f~ef~~P~~k~l~~~i~~~~~ 278 (386)
+++.+.++++.+.+. ..+.++.+.++|+|.+.+.. +. ....+|+. .+..++++.+ ..
T Consensus 140 d~~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~~~~~~~----~~~~i~~l~~----~~- 210 (393)
T 2qr6_A 140 DTELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAEHVNTGG----EALNLKEFIG----SL- 210 (393)
T ss_dssp CHHHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSSCCCC---------CHHHHHH----HC-
T ss_pred CHHHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccccCCCcc----cHHHHHHHHH----hc-
Confidence 788888888776642 34556677788999887642 21 22444432 1222233333 22
Q ss_pred CCcEEEEecCCcc--hHHHHHhcCCCEEEcCC
Q 016596 279 DLSLILYASGSGG--LLERLALTGVDVVSLDW 308 (386)
Q Consensus 279 ~~~~~~H~cG~~~--~l~~l~e~g~d~l~~d~ 308 (386)
++|+++ -|-.+ ....+.+.|+|.+.+..
T Consensus 211 ~~pvi~--ggi~t~e~a~~~~~~Gad~i~vg~ 240 (393)
T 2qr6_A 211 DVPVIA--GGVNDYTTALHMMRTGAVGIIVGG 240 (393)
T ss_dssp SSCEEE--ECCCSHHHHHHHHTTTCSEEEESC
T ss_pred CCCEEE--CCcCCHHHHHHHHHcCCCEEEECC
Confidence 578777 22222 35677789999887743
No 435
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=21.30 E-value=1.7e+02 Score=27.00 Aligned_cols=50 Identities=10% Similarity=0.229 Sum_probs=23.7
Q ss_pred CeeEEecC-CcCccCCCHHHHHHHHHHHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHH
Q 016596 322 DVAVQGNV-DPGALFGSKDFITNRINDTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEV 380 (386)
Q Consensus 322 ~~~l~G~v-d~~~l~gt~eev~~~v~~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a 380 (386)
.+++.|+. .|.. .+.+.+.+-++.+.+. + -.+.+++| ....|.++.+.++
T Consensus 118 ~i~~~gg~~~p~~--~~~~~l~~ll~~ik~~-g-~~i~~t~G-----~l~~e~l~~L~~a 168 (369)
T 1r30_A 118 RFCMGAAWKNPHE--RDMPYLEQMVQGVKAM-G-LEACMTLG-----TLSESQAQRLANA 168 (369)
T ss_dssp EEEEEECCSSCCT--TTHHHHHHHHHHHHHT-T-SEEEEECS-----SCCHHHHHHHHHH
T ss_pred EEEEEeCCCCCCc--CCHHHHHHHHHHHHHc-C-CeEEEecC-----CCCHHHHHHHHHC
Confidence 35665654 2322 3445555555544432 1 11223333 2367777777665
No 436
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=21.24 E-value=4.1e+02 Score=23.45 Aligned_cols=93 Identities=17% Similarity=0.218 Sum_probs=58.9
Q ss_pred cEEEEecCCcc--h--HHHHHhcCCCEEEcCCC-CCHHHHHHHhCCCee-EEecCCcCccCCCHHHHHHHHHHHHHHcCC
Q 016596 281 SLILYASGSGG--L--LERLALTGVDVVSLDWT-VDMAEGRRRLGPDVA-VQGNVDPGALFGSKDFITNRINDTVRKAGR 354 (386)
Q Consensus 281 ~~~~H~cG~~~--~--l~~l~e~g~d~l~~d~~-~dl~e~~~~~g~~~~-l~G~vd~~~l~gt~eev~~~v~~~i~~~~~ 354 (386)
++.+=+-|... . -..|++.|.+++-.+-. ..++++.+.+|++.. +.+. ..+++++++-++++.+.+++
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~D------v~~~~~v~~~~~~~~~~~G~ 103 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQAD------SANLAELDRLYEKVKAEAGR 103 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECC------TTCHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEec------CCCHHHHHHHHHHHHHHcCC
Confidence 34555544432 2 38889999998766532 246667777776532 2221 37789999999999998863
Q ss_pred -CCeEEecCCCC---CCCCcHHHHHHHHH
Q 016596 355 -WKHILNLGHGI---KVGTPEENVAHFFE 379 (386)
Q Consensus 355 -~g~Ils~gc~i---~~~tp~Eni~a~~~ 379 (386)
..+|-+.|-.. ..++++|..+.+++
T Consensus 104 iDiLVNNAG~~~~~~~~~~~~e~w~~~~~ 132 (273)
T 4fgs_A 104 IDVLFVNAGGGSMLPLGEVTEEQYDDTFD 132 (273)
T ss_dssp EEEEEECCCCCCCCCTTSCCHHHHHHHHH
T ss_pred CCEEEECCCCCCCCChhhccHHHHHHHHH
Confidence 24444554332 14678888777765
No 437
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=21.18 E-value=7.7e+02 Score=26.27 Aligned_cols=76 Identities=13% Similarity=0.122 Sum_probs=42.4
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHH---HhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc----hHHHHHhcCCC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFE---EFSLPYLKQIVDTVKQTHPDLSLILYASGSGG----LLERLALTGVD 302 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~---ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~----~l~~l~e~g~d 302 (386)
+.++.+.++|+|+|.+.-........+.+= .--.....++++.+++.. ++|+++-+-.+.. ....+.+.|+|
T Consensus 652 ~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~-~~Pv~vK~~~~~~~~~~~a~~~~~~G~d 730 (1025)
T 1gte_A 652 ELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV-QIPFFAKLTPNVTDIVSIARAAKEGGAD 730 (1025)
T ss_dssp HHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC-SSCEEEEECSCSSCHHHHHHHHHHHTCS
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh-CCceEEEeCCChHHHHHHHHHHHHcCCC
Confidence 345555678999998753222112222210 001234456666666654 5788886665543 24666788999
Q ss_pred EEEc
Q 016596 303 VVSL 306 (386)
Q Consensus 303 ~l~~ 306 (386)
.+.+
T Consensus 731 ~i~v 734 (1025)
T 1gte_A 731 GVTA 734 (1025)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8877
No 438
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=21.11 E-value=1.4e+02 Score=27.77 Aligned_cols=51 Identities=12% Similarity=0.163 Sum_probs=33.3
Q ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEecC-CCC------CCCCcHHHHHHHHHHHHhhc
Q 016596 335 FGSKDFITNRINDTVRKAGRWKHILNLG-HGI------KVGTPEENVAHFFEVAKAIR 385 (386)
Q Consensus 335 ~gt~eev~~~v~~~i~~~~~~g~Ils~g-c~i------~~~tp~Eni~a~~~a~~~yg 385 (386)
..+++++++.+++.++.+.+.--++..| .+- .+..++|.++++++.++++|
T Consensus 171 ~~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g 228 (426)
T 2r8c_A 171 ADGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRG 228 (426)
T ss_dssp CCSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcC
Confidence 4678899999998888754322222221 111 12567888999999999887
No 439
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=21.08 E-value=3.9e+02 Score=22.76 Aligned_cols=99 Identities=12% Similarity=0.112 Sum_probs=52.6
Q ss_pred HHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEe---cCCcc-----h-HHHHHhcCCCE
Q 016596 233 QYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYA---SGSGG-----L-LERLALTGVDV 303 (386)
Q Consensus 233 ~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~---cG~~~-----~-l~~l~e~g~d~ 303 (386)
+..++.|+|.|-+.-..+. .+.--++...+.+..+++.. + |+.+-. .+.++ . .....+.|+|.
T Consensus 77 ~~A~~~Gad~Id~viN~g~------~~~~~~~~~~~~i~~v~~a~-~-pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~ 148 (225)
T 1mzh_A 77 VEAVRDGAQELDIVWNLSA------FKSEKYDFVVEELKEIFRET-P-SAVHKVIVETPYLNEEEIKKAVEICIEAGADF 148 (225)
T ss_dssp HHHHHTTCSEEEEECCHHH------HHTTCHHHHHHHHHHHHHTC-T-TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHcCCCEEEEEecHHH------HhcCChHHHHHHHHHHHHHh-c-CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCE
Confidence 4566799999875333332 11111234445566666653 2 444433 33332 1 25556789999
Q ss_pred EEcCCC--------CCHHHHHHHhCCCeeE--EecCCcCccCCCHHHHHHHH
Q 016596 304 VSLDWT--------VDMAEGRRRLGPDVAV--QGNVDPGALFGSKDFITNRI 345 (386)
Q Consensus 304 l~~d~~--------~dl~e~~~~~g~~~~l--~G~vd~~~l~gt~eev~~~v 345 (386)
+..... .++..+++..++++.+ .|||. |++++.+.+
T Consensus 149 I~tstg~~~gga~~~~i~~v~~~v~~~ipVia~GGI~------t~~da~~~l 194 (225)
T 1mzh_A 149 IKTSTGFAPRGTTLEEVRLIKSSAKGRIKVKASGGIR------DLETAISMI 194 (225)
T ss_dssp EECCCSCSSSCCCHHHHHHHHHHHTTSSEEEEESSCC------SHHHHHHHH
T ss_pred EEECCCCCCCCCCHHHHHHHHHHhCCCCcEEEECCCC------CHHHHHHHH
Confidence 854321 1456777777655444 56663 455555444
No 440
>3lm3_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.44A {Parabacteroides distasonis}
Probab=21.06 E-value=78 Score=29.12 Aligned_cols=65 Identities=9% Similarity=0.101 Sum_probs=43.6
Q ss_pred HHHHHHHhCCCeeEEecCCcCccCCCHHHHHHHHHHHHHHcC---CCCeEEecCCCCCCCCcHHHHHHHHH
Q 016596 312 MAEGRRRLGPDVAVQGNVDPGALFGSKDFITNRINDTVRKAG---RWKHILNLGHGIKVGTPEENVAHFFE 379 (386)
Q Consensus 312 l~e~~~~~g~~~~l~G~vd~~~l~gt~eev~~~v~~~i~~~~---~~g~Ils~gc~i~~~tp~Eni~a~~~ 379 (386)
+.+..+++|+.+.++-|..|.+ +++.++|.++.-+.++... +.||--. --+..-..++|++.+-+
T Consensus 95 v~~c~~kyGDEV~~~pGYf~~m-ylPr~eV~ReMSEAi~~lh~m~~~~YrPk--sl~~gflsa~nl~~Lae 162 (449)
T 3lm3_A 95 VVECQKKYGDEVTYFPGYFPAM-YLPRERVNREMSEAIEIISKMVGNGYRPQ--SIMGGFLSADNLRYLAE 162 (449)
T ss_dssp HHHHHHHHCCEEEECCCSCHHH-HSCHHHHHHHHHHHHHHHHHHHCTTCCCS--EEECSSCCHHHHHHHHH
T ss_pred HHHHHHHhCCceeecCCCchhh-cCcHHHHHHHHHHHHHHHHHhccCCcCch--hhhhcccCHHHHhhHHh
Confidence 3466778999999988865554 8999999988887777652 3343321 01123458999987654
No 441
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=20.85 E-value=2.5e+02 Score=24.90 Aligned_cols=56 Identities=13% Similarity=0.141 Sum_probs=31.2
Q ss_pred HHHHHHHHhCCCEEEEecCCcCCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCCcc--hHHHHHhcC
Q 016596 230 KYVQYQADNGAQAVQIFDSWATELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGSGG--LLERLALTG 300 (386)
Q Consensus 230 ~~~~~~~e~G~d~i~i~d~~~~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~--~l~~l~e~g 300 (386)
++++.+.++|+|++.+.|-. ++ -..++.+.++++ |...+.-+..... .++.+.+..
T Consensus 110 ~f~~~~~~aG~dGviv~Dl~-----~e--------e~~~~~~~~~~~--gl~~i~liap~s~~eri~~ia~~~ 167 (271)
T 1ujp_A 110 RFFGLFKQAGATGVILPDLP-----PD--------EDPGLVRLAQEI--GLETVFLLAPTSTDARIATVVRHA 167 (271)
T ss_dssp HHHHHHHHHTCCEEECTTCC-----GG--------GCHHHHHHHHHH--TCEEECEECTTCCHHHHHHHHTTC
T ss_pred HHHHHHHHcCCCEEEecCCC-----HH--------HHHHHHHHHHHc--CCceEEEeCCCCCHHHHHHHHHhC
Confidence 55667788999998876522 11 223444666666 4443433333332 466666553
No 442
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=20.80 E-value=1.3e+02 Score=27.22 Aligned_cols=43 Identities=14% Similarity=0.328 Sum_probs=33.3
Q ss_pred HHHHHHHHHHhhCCCCcEEEEecCCcc----------hHHHHHhcCCCEEEcCCC
Q 016596 265 YLKQIVDTVKQTHPDLSLILYASGSGG----------LLERLALTGVDVVSLDWT 309 (386)
Q Consensus 265 ~~k~l~~~i~~~~~~~~~~~H~cG~~~----------~l~~l~e~g~d~l~~d~~ 309 (386)
..+++++.+|+. |..++....++.. .+..+.+.|+|+|.-|..
T Consensus 216 ~~~~~V~~ah~~--G~~V~vWTv~t~d~~~~~~~~~~~~~~L~~~GVDgIiTD~P 268 (292)
T 3mz2_A 216 EVREVIDMLHER--GVMCMISTAPSDDKLSTPESRAEAYRMIIRQGVDIIESDRP 268 (292)
T ss_dssp HHHHHHHHHHHT--TBCEEEECTTTGGGSSSHHHHHHHHHHHHHTTCCEEEESCH
T ss_pred cCHHHHHHHHHC--CCEEEEEeCCCcchhhhccccHHHHHHHHHcCCCEEEeCCH
Confidence 347889999997 5788888887642 357888999999988853
No 443
>2hwg_A Phosphoenolpyruvate-protein phosphotransferase; enzyme I, phosphoenolpyruvate:sugar phosphotransferase system, PTS; HET: NEP; 2.70A {Escherichia coli} PDB: 2kx9_A 2xdf_A 2l5h_A
Probab=20.76 E-value=2.9e+02 Score=27.61 Aligned_cols=84 Identities=15% Similarity=0.138 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHhhCCCCcEEEEecCCcc----hHHHHHhcCCCEEEcCCCCCHHHHHHHhCCCeeEEecCC---cCcc
Q 016596 262 SLPYLKQIVDTVKQTHPDLSLILYASGSGG----LLERLALTGVDVVSLDWTVDMAEGRRRLGPDVAVQGNVD---PGAL 334 (386)
Q Consensus 262 ~~P~~k~l~~~i~~~~~~~~~~~H~cG~~~----~l~~l~e~g~d~l~~d~~~dl~e~~~~~g~~~~l~G~vd---~~~l 334 (386)
+..-.+++++..++. |+++ -+||... ..+.+..+|++.+++... .+..+|..+.. ..+ .... ...|
T Consensus 481 Vl~li~~vv~aa~~~--g~~v--gvCGe~agdp~~~~~l~~lG~~~~S~~p~-~v~~~~~~~~~-~~~-~~~~~la~~~l 553 (575)
T 2hwg_A 481 VLNLIKQVIDASHAE--GKWT--GMCGELAGDERATLLLLGMGLDEFSMSAI-SIPRIKKIIRN-TNF-EDAKVLAEQAL 553 (575)
T ss_dssp HHHHHHHHHHHHHHT--TCEE--EECSTTTTCTTTHHHHHHTTCCEEEECGG-GHHHHHHHHHT-SCH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh--CCeE--EEeCCCCCCHHHHHHHHHCCCCEEEECcc-HHHHHHHHHHh-cCH-HHHHHHHHHHH
Confidence 444566777777776 5664 5688742 368899999999988752 45555555532 111 0010 1124
Q ss_pred -CCCHHHHHHHHHHHHHHc
Q 016596 335 -FGSKDFITNRINDTVRKA 352 (386)
Q Consensus 335 -~gt~eev~~~v~~~i~~~ 352 (386)
..|+++|++.+++.++..
T Consensus 554 ~~~~~~~v~~~~~~~~~~~ 572 (575)
T 2hwg_A 554 AQPTTDELMTLVNKFIEEK 572 (575)
T ss_dssp HCSSHHHHHHHHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHhc
Confidence 689999999998887654
No 444
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=20.29 E-value=2.7e+02 Score=24.14 Aligned_cols=68 Identities=13% Similarity=0.131 Sum_probs=35.2
Q ss_pred hHHHHHhcCCCEEEcCCC-------CCHHHHHHHhCC-CeeEEecC-CcCc--c-CCCHH---HHHHHHHHHHHHcC--C
Q 016596 292 LLERLALTGVDVVSLDWT-------VDMAEGRRRLGP-DVAVQGNV-DPGA--L-FGSKD---FITNRINDTVRKAG--R 354 (386)
Q Consensus 292 ~l~~l~e~g~d~l~~d~~-------~dl~e~~~~~g~-~~~l~G~v-d~~~--l-~gt~e---ev~~~v~~~i~~~~--~ 354 (386)
.++.+.++|++.+.+... .++.++++.+.+ .+.+.+.. .+.. + ..+++ +..+..++.++.+. |
T Consensus 22 ~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~l~~~d~~~r~~~~~~~~~~i~~a~~lG 101 (294)
T 3vni_A 22 YIEKVAKLGFDILEIAASPLPFYSDIQINELKACAHGNGITLTVGHGPSAEQNLSSPDPDIRKNAKAFYTDLLKRLYKLD 101 (294)
T ss_dssp HHHHHHHHTCSEEEEESTTGGGCCHHHHHHHHHHHHHTTCEEEEEECCCGGGCTTCSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCEEEecCcccCCcCHHHHHHHHHHHHHcCCeEEEeecCCCCcCCCCCCHHHHHHHHHHHHHHHHHHHHhC
Confidence 367788899998865311 134555554431 24444321 2222 3 23343 34456667777665 5
Q ss_pred CCeEE
Q 016596 355 WKHIL 359 (386)
Q Consensus 355 ~g~Il 359 (386)
..+|.
T Consensus 102 ~~~v~ 106 (294)
T 3vni_A 102 VHLIG 106 (294)
T ss_dssp CCEEE
T ss_pred CCeee
Confidence 56664
No 445
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=20.14 E-value=8.6e+02 Score=26.45 Aligned_cols=141 Identities=16% Similarity=0.205 Sum_probs=76.7
Q ss_pred HHHHHHHHHHHHHh--CCCEEEEecCCc--------CCCCHHHHHHhhHHHHHHHHHHHHhhCCCCcEEEEecCC-----
Q 016596 225 TTSMAKYVQYQADN--GAQAVQIFDSWA--------TELSPVDFEEFSLPYLKQIVDTVKQTHPDLSLILYASGS----- 289 (386)
Q Consensus 225 ~~~~~~~~~~~~e~--G~d~i~i~d~~~--------~~iSp~~f~ef~~P~~k~l~~~i~~~~~~~~~~~H~cG~----- 289 (386)
++-.++.++.+.++ |...+- .|+ .+++++.|+. ++++ ++..++.++.+.+-|.
T Consensus 554 ~~~kl~ia~~L~~~~~G~~~lE---~~Gga~~e~~~~~~~e~~~e~-----l~~l----~~~~~~~~~~~l~R~~n~vgy 621 (1150)
T 3hbl_A 554 TKDMINIASKTADVFKDGFSLE---MWGGATFDVAYNFLKENPWER-----LERL----RKAIPNVLFQMLLRASNAVGY 621 (1150)
T ss_dssp HHHHHHHHHHHHHHTTTCSEEE---EEETTHHHHHHHTSCCCHHHH-----HHHH----HHHCCSSEEEEEEETTTBTCS
T ss_pred HHHHHHHHHHHHHhhCCCcEEe---ecCCceEEecccccCCCHHHH-----HHHH----HHhCCCCeEEEEecccccccc
Confidence 56667777777777 544332 222 1555555442 3333 3333355666666441
Q ss_pred ------cc--hHHHHHhcCCCEEEc-CCCCC------HHHHHHHhCCCeeEEecCCcC-------cc-CCCHHHHHHHHH
Q 016596 290 ------GG--LLERLALTGVDVVSL-DWTVD------MAEGRRRLGPDVAVQGNVDPG-------AL-FGSKDFITNRIN 346 (386)
Q Consensus 290 ------~~--~l~~l~e~g~d~l~~-d~~~d------l~e~~~~~g~~~~l~G~vd~~-------~l-~gt~eev~~~v~ 346 (386)
.. .++...+.|++++.+ +...| ..+..+..|.. ..+.+.+. .- .-+++.+.+.++
T Consensus 622 ~~~pd~v~~~~v~~a~~~Gvd~irif~~~sd~~~~~~~~~~~~e~g~~--~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~ 699 (1150)
T 3hbl_A 622 KNYPDNVIHKFVQESAKAGIDVFRIFDSLNWVDQMKVANEAVQEAGKI--SEGTICYTGDILNPERSNIYTLEYYVKLAK 699 (1150)
T ss_dssp SCCCHHHHHHHHHHHHHTTCCEEEEECTTCCGGGGHHHHHHHHHTTCE--EEEEEECCSCTTCTTTCSSSSHHHHHHHHH
T ss_pred ccCCchhHHHHHHHHHhCCcCEEEEEeeCCHHHHHHHHHHHHHHHhhh--eeEEEeecccccChhhcCCCCHHHHHHHHH
Confidence 11 256777899999865 33322 23334445542 33333332 22 367888888888
Q ss_pred HHHHHcCCCCeEEecCCCCCCCCcHHHHHHHHHHHHh
Q 016596 347 DTVRKAGRWKHILNLGHGIKVGTPEENVAHFFEVAKA 383 (386)
Q Consensus 347 ~~i~~~~~~g~Ils~gc~i~~~tp~Eni~a~~~a~~~ 383 (386)
++.+.+ -.+++.. +...-..|+.+..+++++++
T Consensus 700 ~~~~~G---a~~i~l~-Dt~G~~~P~~~~~lv~~l~~ 732 (1150)
T 3hbl_A 700 ELEREG---FHILAIK-DMAGLLKPKAAYELIGELKS 732 (1150)
T ss_dssp HHHHTT---CSEEEEE-ETTCCCCHHHHHHHHHHHHH
T ss_pred HHHHcC---CCeeeEc-CccCCCCHHHHHHHHHHHHH
Confidence 776654 2344443 33334456678888888775
Done!