Query 016599
Match_columns 386
No_of_seqs 284 out of 3082
Neff 8.6
Searched_HMMs 29240
Date Mon Mar 25 16:16:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016599.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016599hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t7v_A Methylornithine synthas 100.0 2.1E-47 7.2E-52 369.0 29.6 318 37-370 10-348 (350)
2 1r30_A Biotin synthase; SAM ra 100.0 3.8E-46 1.3E-50 362.6 37.2 318 46-365 23-340 (369)
3 3iix_A Biotin synthetase, puta 100.0 2.1E-41 7.1E-46 326.8 35.0 314 37-363 3-337 (348)
4 2qgq_A Protein TM_1862; alpha- 99.9 2.3E-23 8E-28 196.7 19.0 198 90-294 6-216 (304)
5 1tv8_A MOAA, molybdenum cofact 99.9 1.6E-20 5.3E-25 180.2 22.8 204 82-296 9-221 (340)
6 1olt_A Oxygen-independent copr 99.9 3E-21 1E-25 192.2 15.3 203 91-302 56-277 (457)
7 2yx0_A Radical SAM enzyme; pre 99.8 5.5E-19 1.9E-23 169.5 18.4 201 96-304 77-308 (342)
8 3c8f_A Pyruvate formate-lyase 99.8 1.9E-18 6.4E-23 157.2 19.4 194 96-300 26-238 (245)
9 2z2u_A UPF0026 protein MJ0257; 99.7 6.1E-18 2.1E-22 160.1 11.9 197 90-300 53-282 (311)
10 3rfa_A Ribosomal RNA large sub 99.7 3.3E-15 1.1E-19 144.7 20.9 189 96-302 122-338 (404)
11 2a5h_A L-lysine 2,3-aminomutas 99.5 7.3E-14 2.5E-18 137.0 15.9 187 90-301 117-318 (416)
12 3can_A Pyruvate-formate lyase- 99.3 3.3E-11 1.1E-15 104.6 15.9 151 141-301 6-174 (182)
13 2cw6_A Hydroxymethylglutaryl-C 98.5 9.7E-06 3.3E-10 75.6 20.2 222 122-360 24-265 (298)
14 1ydn_A Hydroxymethylglutaryl-C 98.4 4.6E-05 1.6E-09 70.9 20.6 222 121-360 22-264 (295)
15 4fhd_A Spore photoproduct lyas 98.3 8E-07 2.7E-11 84.6 7.6 160 92-259 111-282 (368)
16 2ftp_A Hydroxymethylglutaryl-C 98.2 0.00036 1.2E-08 65.0 22.4 224 121-360 26-268 (302)
17 1ydo_A HMG-COA lyase; TIM-barr 98.2 0.00028 9.7E-09 65.8 21.2 224 121-360 24-266 (307)
18 3ble_A Citramalate synthase fr 98.1 0.00041 1.4E-08 65.6 20.2 221 121-360 37-273 (337)
19 3ewb_X 2-isopropylmalate synth 97.8 0.0016 5.5E-08 60.2 18.3 221 121-360 23-260 (293)
20 1nvm_A HOA, 4-hydroxy-2-oxoval 97.7 0.0023 8E-08 60.6 19.0 214 121-360 26-253 (345)
21 3ivs_A Homocitrate synthase, m 97.6 0.0077 2.6E-07 58.3 20.3 209 121-353 57-275 (423)
22 3rmj_A 2-isopropylmalate synth 97.5 0.015 5.2E-07 55.4 20.7 218 121-360 30-267 (370)
23 3eeg_A 2-isopropylmalate synth 97.4 0.009 3.1E-07 56.0 17.8 220 121-360 24-261 (325)
24 2ztj_A Homocitrate synthase; ( 97.2 0.02 6.8E-07 54.9 18.4 209 121-354 21-242 (382)
25 1rqb_A Transcarboxylase 5S sub 97.2 0.0047 1.6E-07 61.6 14.2 215 121-360 43-279 (539)
26 2nx9_A Oxaloacetate decarboxyl 97.2 0.025 8.6E-07 55.5 18.5 213 122-360 27-260 (464)
27 3bg3_A Pyruvate carboxylase, m 97.1 0.042 1.4E-06 56.8 20.1 214 122-360 122-364 (718)
28 3qja_A IGPS, indole-3-glycerol 96.8 0.19 6.6E-06 45.6 20.4 196 126-364 73-269 (272)
29 3inp_A D-ribulose-phosphate 3- 96.7 0.027 9.3E-07 50.5 13.1 199 122-355 37-241 (246)
30 1h5y_A HISF; histidine biosynt 96.4 0.11 3.7E-06 46.1 15.6 204 125-360 33-251 (253)
31 1eye_A DHPS 1, dihydropteroate 95.7 0.18 6.2E-06 46.0 13.4 97 85-199 5-105 (280)
32 3ovp_A Ribulose-phosphate 3-ep 95.6 0.15 5E-06 45.1 12.3 193 123-354 15-214 (228)
33 3ctl_A D-allulose-6-phosphate 95.5 0.45 1.5E-05 42.0 15.0 193 125-355 13-215 (231)
34 1x7f_A Outer surface protein; 95.5 0.34 1.2E-05 46.0 14.8 147 122-301 38-196 (385)
35 3k13_A 5-methyltetrahydrofolat 95.3 1.6 5.3E-05 40.1 18.2 195 122-335 34-254 (300)
36 1thf_D HISF protein; thermophI 95.2 0.94 3.2E-05 40.1 16.5 205 127-360 32-248 (253)
37 3dxi_A Putative aldolase; TIM 95.2 0.34 1.2E-05 45.0 13.6 210 121-355 20-240 (320)
38 2qf7_A Pyruvate carboxylase pr 95.2 0.95 3.2E-05 49.5 19.1 213 122-360 570-811 (1165)
39 3hq1_A 2-isopropylmalate synth 95.1 0.55 1.9E-05 47.6 15.9 226 120-360 88-338 (644)
40 2ekc_A AQ_1548, tryptophan syn 94.8 2.1 7.3E-05 38.3 20.3 186 123-338 29-237 (262)
41 3tr9_A Dihydropteroate synthas 94.7 0.82 2.8E-05 42.2 14.6 76 122-199 46-130 (314)
42 3tsm_A IGPS, indole-3-glycerol 94.5 1.9 6.5E-05 39.0 16.4 172 128-340 82-254 (272)
43 2dqw_A Dihydropteroate synthas 94.4 0.57 1.9E-05 42.9 12.9 76 122-199 49-128 (294)
44 2y5s_A DHPS, dihydropteroate s 94.4 0.72 2.5E-05 42.2 13.4 97 85-199 22-122 (294)
45 4hb7_A Dihydropteroate synthas 94.3 1.5 5.2E-05 39.4 15.1 76 122-199 27-106 (270)
46 2p0o_A Hypothetical protein DU 94.2 1.6 5.4E-05 41.3 15.5 77 123-201 15-99 (372)
47 1aj0_A DHPS, dihydropteroate s 94.0 0.77 2.6E-05 41.8 12.8 137 122-260 35-207 (282)
48 3vnd_A TSA, tryptophan synthas 93.9 2.4 8.2E-05 38.2 15.8 185 123-337 30-237 (267)
49 1ka9_F Imidazole glycerol phos 93.5 1.4 4.8E-05 39.0 13.5 206 126-360 32-249 (252)
50 2p10_A MLL9387 protein; putati 93.2 4.7 0.00016 36.4 17.6 186 159-360 79-285 (286)
51 1tqj_A Ribulose-phosphate 3-ep 93.2 0.55 1.9E-05 41.4 10.1 199 124-355 16-219 (230)
52 2yci_X 5-methyltetrahydrofolat 93.1 2.8 9.4E-05 37.9 14.7 129 122-270 31-169 (271)
53 3hbl_A Pyruvate carboxylase; T 92.9 5.9 0.0002 43.3 19.5 214 122-360 552-794 (1150)
54 1tx2_A DHPS, dihydropteroate s 92.7 1.7 5.8E-05 39.8 12.8 76 122-199 60-140 (297)
55 3f4w_A Putative hexulose 6 pho 92.5 3.1 0.0001 35.6 13.9 190 122-353 10-203 (211)
56 3no5_A Uncharacterized protein 92.5 5.9 0.0002 35.7 17.9 225 121-363 26-265 (275)
57 2bdq_A Copper homeostasis prot 92.5 0.83 2.8E-05 39.9 9.9 139 123-282 74-219 (224)
58 1qop_A Tryptophan synthase alp 92.4 2.1 7.1E-05 38.5 13.1 186 123-338 29-237 (268)
59 1vzw_A Phosphoribosyl isomeras 92.2 1.5 5E-05 38.7 11.6 198 126-353 33-239 (244)
60 2y88_A Phosphoribosyl isomeras 91.9 4 0.00014 35.7 14.1 75 126-205 32-107 (244)
61 2vef_A Dihydropteroate synthas 91.8 3.9 0.00013 37.7 14.3 98 84-199 8-110 (314)
62 3cu2_A Ribulose-5-phosphate 3- 91.6 0.46 1.6E-05 42.1 7.5 189 126-355 27-234 (237)
63 1m5w_A Pyridoxal phosphate bio 91.4 0.83 2.8E-05 40.1 8.6 117 125-253 77-203 (243)
64 3e49_A Uncharacterized protein 91.4 8.6 0.00029 35.3 20.2 227 121-363 28-294 (311)
65 3mcm_A 2-amino-4-hydroxy-6-hyd 90.9 2.5 8.6E-05 40.9 12.3 97 83-199 188-297 (442)
66 1vli_A Spore coat polysacchari 90.5 12 0.00041 35.4 17.5 203 123-355 42-275 (385)
67 2y7e_A 3-keto-5-aminohexanoate 90.4 10 0.00034 34.4 17.2 224 122-363 31-271 (282)
68 2bmb_A Folic acid synthesis pr 90.3 7.4 0.00025 38.6 15.4 77 123-199 247-336 (545)
69 2w6r_A Imidazole glycerol phos 90.3 5.4 0.00019 35.4 13.6 204 128-360 33-253 (266)
70 2vp8_A Dihydropteroate synthas 90.3 2.1 7.1E-05 39.6 10.8 76 122-199 62-142 (318)
71 1qwg_A PSL synthase;, (2R)-pho 90.2 9 0.00031 33.9 14.3 130 122-270 23-168 (251)
72 3e02_A Uncharacterized protein 90.1 11 0.00039 34.5 21.8 228 121-363 28-294 (311)
73 3c6c_A 3-keto-5-aminohexanoate 89.9 12 0.0004 34.5 18.3 222 122-363 45-303 (316)
74 4e38_A Keto-hydroxyglutarate-a 89.7 8.3 0.00028 33.8 13.7 160 122-336 43-203 (232)
75 3nav_A Tryptophan synthase alp 89.6 11 0.00039 33.8 17.2 186 123-338 32-240 (271)
76 3gk0_A PNP synthase, pyridoxin 89.4 1.2 4.2E-05 39.7 8.0 118 124-253 104-231 (278)
77 3lot_A Uncharacterized protein 89.4 13 0.00044 34.2 21.1 227 121-363 28-297 (314)
78 2wqp_A Polysialic acid capsule 89.2 4.7 0.00016 37.7 12.3 120 123-261 33-174 (349)
79 2fli_A Ribulose-phosphate 3-ep 89.0 2.1 7.3E-05 36.9 9.5 196 123-355 14-216 (220)
80 3ajx_A 3-hexulose-6-phosphate 88.8 10 0.00034 32.1 17.2 189 122-355 10-204 (207)
81 1tqx_A D-ribulose-5-phosphate 88.6 4.5 0.00015 35.4 11.3 200 123-355 16-219 (227)
82 3oa3_A Aldolase; structural ge 88.0 15 0.00051 33.2 18.7 180 121-332 70-260 (288)
83 1f6y_A 5-methyltetrahydrofolat 87.3 15 0.00052 32.7 14.2 157 122-304 22-190 (262)
84 3chv_A Prokaryotic domain of u 87.1 17 0.00058 32.9 16.9 223 122-363 31-269 (284)
85 2h9a_B CO dehydrogenase/acetyl 86.5 12 0.0004 34.4 13.1 72 125-196 74-149 (310)
86 3lab_A Putative KDPG (2-keto-3 86.1 12 0.00041 32.4 12.3 183 121-355 21-210 (217)
87 3o6c_A PNP synthase, pyridoxin 85.8 3.7 0.00013 36.3 8.9 121 124-252 75-222 (260)
88 4djd_D C/Fe-SP, corrinoid/iron 85.6 9.3 0.00032 35.3 11.9 135 125-259 80-236 (323)
89 1h1y_A D-ribulose-5-phosphate 85.4 13 0.00044 32.2 12.5 195 124-355 18-219 (228)
90 1twd_A Copper homeostasis prot 85.4 7.7 0.00026 34.5 10.9 125 123-272 71-200 (256)
91 1z41_A YQJM, probable NADH-dep 83.5 4 0.00014 38.0 8.7 80 122-201 226-307 (338)
92 3tdn_A FLR symmetric alpha-bet 83.2 6 0.0002 34.8 9.4 75 127-205 37-112 (247)
93 4af0_A Inosine-5'-monophosphat 83.0 12 0.0004 37.1 11.9 125 125-271 280-414 (556)
94 3g8r_A Probable spore coat pol 82.8 12 0.00041 34.9 11.5 203 123-355 19-251 (350)
95 3tha_A Tryptophan synthase alp 82.4 26 0.00088 31.0 14.8 202 123-355 26-248 (252)
96 3gr7_A NADPH dehydrogenase; fl 82.3 3.3 0.00011 38.6 7.6 75 123-201 227-307 (340)
97 1f76_A Dihydroorotate dehydrog 82.3 8.4 0.00029 35.6 10.5 79 122-201 222-318 (336)
98 3apt_A Methylenetetrahydrofola 81.9 9.1 0.00031 35.1 10.3 108 122-243 83-208 (310)
99 3ndo_A Deoxyribose-phosphate a 81.9 26 0.00088 30.6 16.8 176 121-332 25-216 (231)
100 1vcv_A Probable deoxyribose-ph 81.8 26 0.00087 30.5 13.6 184 122-330 14-211 (226)
101 4gj1_A 1-(5-phosphoribosyl)-5- 81.6 27 0.00091 30.6 15.9 194 128-353 34-241 (243)
102 2eja_A URO-D, UPD, uroporphyri 81.4 27 0.00092 32.1 13.6 69 130-201 184-259 (338)
103 1thf_D HISF protein; thermophI 81.2 9.9 0.00034 33.3 10.1 94 130-237 156-250 (253)
104 1jvn_A Glutamine, bifunctional 80.9 42 0.0014 33.3 15.6 219 125-359 280-549 (555)
105 1ka9_F Imidazole glycerol phos 80.8 18 0.00062 31.5 11.7 92 131-236 158-250 (252)
106 3b0p_A TRNA-dihydrouridine syn 80.4 25 0.00086 32.7 13.0 86 184-271 73-165 (350)
107 3gnh_A L-lysine, L-arginine ca 79.8 25 0.00085 32.6 13.1 79 122-202 164-248 (403)
108 1ydn_A Hydroxymethylglutaryl-C 79.8 11 0.00037 34.2 10.1 122 122-260 152-281 (295)
109 3hgj_A Chromate reductase; TIM 78.7 7.4 0.00025 36.3 8.7 80 122-201 236-318 (349)
110 1h5y_A HISF; histidine biosynt 77.8 25 0.00086 30.3 11.7 92 131-236 160-252 (253)
111 3lmz_A Putative sugar isomeras 77.8 17 0.00059 31.6 10.6 171 161-359 32-225 (257)
112 1vc4_A Indole-3-glycerol phosp 77.7 37 0.0013 30.0 17.1 174 126-339 66-240 (254)
113 3ngj_A Deoxyribose-phosphate a 76.9 38 0.0013 29.7 18.1 176 121-332 39-226 (239)
114 1zco_A 2-dehydro-3-deoxyphosph 76.7 37 0.0013 30.2 12.4 119 123-261 35-157 (262)
115 1hg3_A Triosephosphate isomera 76.1 38 0.0013 29.3 16.5 128 187-340 81-210 (225)
116 1vp8_A Hypothetical protein AF 76.1 17 0.00058 30.8 9.1 93 123-226 27-133 (201)
117 3fst_A 5,10-methylenetetrahydr 76.0 46 0.0016 30.3 13.3 118 122-254 94-224 (304)
118 3zwt_A Dihydroorotate dehydrog 76.0 15 0.00051 34.5 10.0 80 122-201 231-327 (367)
119 1w0m_A TIM, triosephosphate is 75.9 39 0.0013 29.3 13.3 129 187-341 78-208 (226)
120 2ftp_A Hydroxymethylglutaryl-C 75.7 26 0.0009 31.7 11.4 123 122-260 156-285 (302)
121 1ur4_A Galactanase; hydrolase, 75.2 28 0.00097 33.0 11.8 134 132-272 55-234 (399)
122 4i6k_A Amidohydrolase family p 74.9 46 0.0016 29.7 16.8 207 122-360 53-274 (294)
123 1rpx_A Protein (ribulose-phosp 74.7 40 0.0014 28.9 12.8 197 123-355 21-225 (230)
124 1r3s_A URO-D, uroporphyrinogen 74.6 41 0.0014 31.3 12.8 69 130-201 202-283 (367)
125 3ffs_A Inosine-5-monophosphate 74.5 25 0.00084 33.5 11.1 124 128-269 146-274 (400)
126 3nvt_A 3-deoxy-D-arabino-heptu 74.2 23 0.00077 33.5 10.8 206 123-356 154-374 (385)
127 2inf_A URO-D, UPD, uroporphyri 73.1 48 0.0016 30.7 12.8 69 130-201 198-272 (359)
128 1tv5_A Dhodehase, dihydroorota 73.0 24 0.00082 34.1 10.8 80 122-201 308-402 (443)
129 2v82_A 2-dehydro-3-deoxy-6-pho 72.7 42 0.0014 28.3 16.3 162 122-339 16-180 (212)
130 4gxw_A Adenosine deaminase; am 71.9 37 0.0013 32.0 11.7 97 122-237 162-264 (380)
131 3kts_A Glycerol uptake operon 71.7 45 0.0015 28.2 13.5 153 136-341 27-185 (192)
132 2p10_A MLL9387 protein; putati 71.5 28 0.00097 31.3 10.0 124 122-258 108-251 (286)
133 1q7z_A 5-methyltetrahydrofolat 71.1 81 0.0028 31.4 14.5 186 122-336 337-539 (566)
134 1j93_A UROD, uroporphyrinogen 70.5 61 0.0021 29.8 12.9 71 130-202 198-275 (353)
135 3r12_A Deoxyribose-phosphate a 70.4 31 0.0011 30.7 10.0 75 122-200 170-244 (260)
136 2rdx_A Mandelate racemase/muco 70.3 55 0.0019 30.5 12.6 126 123-261 171-314 (379)
137 4avf_A Inosine-5'-monophosphat 70.3 42 0.0014 32.7 12.1 119 126-256 229-353 (490)
138 1jub_A Dihydroorotate dehydrog 70.2 36 0.0012 30.7 11.0 169 184-360 109-300 (311)
139 3khj_A Inosine-5-monophosphate 69.9 43 0.0015 31.3 11.6 116 128-256 107-228 (361)
140 3l5l_A Xenobiotic reductase A; 69.8 11 0.00038 35.3 7.5 76 122-201 243-325 (363)
141 3r12_A Deoxyribose-phosphate a 69.6 60 0.0021 28.8 20.1 176 122-332 56-242 (260)
142 3i4k_A Muconate lactonizing en 69.5 29 0.00099 32.6 10.5 43 216-261 280-322 (383)
143 2r8c_A Putative amidohydrolase 69.4 23 0.00078 33.3 9.9 78 122-201 172-255 (426)
144 3ngj_A Deoxyribose-phosphate a 69.4 24 0.00082 31.0 9.0 75 122-200 154-228 (239)
145 3i65_A Dihydroorotate dehydrog 69.3 25 0.00084 33.6 9.8 79 122-201 280-374 (415)
146 3eoo_A Methylisocitrate lyase; 69.2 67 0.0023 29.1 15.2 170 178-357 26-207 (298)
147 1vhn_A Putative flavin oxidore 69.2 12 0.0004 34.4 7.4 70 128-202 143-214 (318)
148 3oa3_A Aldolase; structural ge 69.1 35 0.0012 30.8 10.3 75 122-200 185-262 (288)
149 3ewb_X 2-isopropylmalate synth 68.9 21 0.00073 32.3 9.0 23 122-144 147-169 (293)
150 3sr7_A Isopentenyl-diphosphate 68.8 76 0.0026 29.6 13.5 137 184-339 158-311 (365)
151 3ndo_A Deoxyribose-phosphate a 68.8 39 0.0013 29.5 10.2 75 123-200 144-218 (231)
152 2pgw_A Muconate cycloisomerase 68.7 24 0.00083 33.1 9.8 100 157-261 202-318 (384)
153 2w6r_A Imidazole glycerol phos 68.5 25 0.00087 30.8 9.4 67 131-201 162-229 (266)
154 2ovl_A Putative racemase; stru 68.5 23 0.00077 33.1 9.4 84 157-240 203-301 (371)
155 1hjs_A Beta-1,4-galactanase; 4 68.3 73 0.0025 29.2 17.3 139 133-272 35-214 (332)
156 3p6l_A Sugar phosphate isomera 68.0 19 0.00064 31.4 8.4 18 342-359 212-229 (262)
157 3qtp_A Enolase 1; glycolysis, 67.4 62 0.0021 31.1 12.1 114 121-257 278-396 (441)
158 2qgy_A Enolase from the enviro 67.4 23 0.00079 33.4 9.3 98 157-260 206-321 (391)
159 1u83_A Phosphosulfolactate syn 67.1 61 0.0021 28.9 11.2 120 122-261 50-185 (276)
160 4dwd_A Mandelate racemase/muco 66.9 21 0.00071 33.8 8.9 127 123-261 173-317 (393)
161 1rvg_A Fructose-1,6-bisphospha 66.6 76 0.0026 28.8 13.5 133 122-269 25-172 (305)
162 3o0f_A Putative metal-dependen 66.3 23 0.00077 32.3 8.6 36 224-261 218-253 (301)
163 3iwp_A Copper homeostasis prot 66.3 60 0.0021 29.2 11.2 116 123-256 109-229 (287)
164 3fa4_A 2,3-dimethylmalate lyas 66.3 57 0.0019 29.6 11.2 154 179-335 23-190 (302)
165 3vzx_A Heptaprenylglyceryl pho 65.8 50 0.0017 28.7 10.3 70 122-201 137-208 (228)
166 1jub_A Dihydroorotate dehydrog 65.7 37 0.0013 30.6 10.1 79 122-201 169-271 (311)
167 1ydo_A HMG-COA lyase; TIM-barr 65.3 22 0.00074 32.5 8.3 113 122-245 115-239 (307)
168 3kru_A NADH:flavin oxidoreduct 64.3 20 0.0007 33.3 8.0 80 122-202 227-308 (343)
169 3cyv_A URO-D, UPD, uroporphyri 64.1 54 0.0018 30.2 11.1 70 130-201 192-270 (354)
170 3ble_A Citramalate synthase fr 64.0 45 0.0015 30.8 10.3 36 157-192 167-205 (337)
171 1mzh_A Deoxyribose-phosphate a 64.0 45 0.0015 28.7 9.8 75 122-200 129-203 (225)
172 4fxs_A Inosine-5'-monophosphat 63.9 72 0.0024 31.1 12.3 124 128-270 233-363 (496)
173 1mxs_A KDPG aldolase; 2-keto-3 63.9 71 0.0024 27.5 15.2 155 123-336 36-195 (225)
174 1eep_A Inosine 5'-monophosphat 63.7 94 0.0032 29.2 12.9 70 127-204 154-225 (404)
175 3b0p_A TRNA-dihydrouridine syn 63.7 28 0.00095 32.4 8.9 78 123-201 142-225 (350)
176 1geq_A Tryptophan synthase alp 63.3 49 0.0017 28.6 10.1 184 123-337 17-222 (248)
177 3bjs_A Mandelate racemase/muco 62.9 43 0.0015 32.0 10.3 100 157-261 241-357 (428)
178 4a29_A Engineered retro-aldol 62.1 84 0.0029 27.8 13.9 174 123-341 65-239 (258)
179 2d73_A Alpha-glucosidase SUSB; 61.9 51 0.0017 33.8 10.9 113 122-239 368-508 (738)
180 2e6f_A Dihydroorotate dehydrog 61.8 32 0.0011 31.2 8.8 79 122-201 171-273 (314)
181 3feq_A Putative amidohydrolase 61.7 20 0.0007 33.5 7.8 78 122-201 169-252 (423)
182 1y0e_A Putative N-acetylmannos 61.6 38 0.0013 28.7 8.9 76 122-201 127-204 (223)
183 1to3_A Putative aldolase YIHT; 61.4 76 0.0026 28.7 11.2 125 132-270 115-254 (304)
184 2y88_A Phosphoribosyl isomeras 61.4 16 0.00056 31.6 6.6 70 128-201 152-225 (244)
185 3otr_A Enolase; structural gen 61.3 25 0.00084 33.9 8.1 115 121-257 280-399 (452)
186 4fo4_A Inosine 5'-monophosphat 61.3 82 0.0028 29.4 11.7 123 129-269 111-239 (366)
187 3lye_A Oxaloacetate acetyl hyd 60.9 43 0.0015 30.6 9.3 67 121-193 139-212 (307)
188 3qn3_A Enolase; structural gen 60.7 29 0.001 33.2 8.6 116 122-257 261-379 (417)
189 3a24_A Alpha-galactosidase; gl 60.6 37 0.0013 34.3 9.6 108 122-238 306-424 (641)
190 1qwg_A PSL synthase;, (2R)-pho 60.6 46 0.0016 29.3 9.1 103 122-234 52-163 (251)
191 1ub3_A Aldolase protein; schif 60.4 59 0.002 28.0 9.8 75 122-200 130-204 (220)
192 1tzz_A Hypothetical protein L1 60.4 31 0.0011 32.5 8.7 24 216-239 300-326 (392)
193 3iar_A Adenosine deaminase; pu 60.4 42 0.0015 31.4 9.5 13 224-236 245-257 (367)
194 3vk5_A MOEO5; TIM barrel, tran 60.1 47 0.0016 29.9 9.2 70 124-202 185-257 (286)
195 4exq_A UPD, URO-D, uroporphyri 60.1 59 0.002 30.3 10.5 68 132-201 204-280 (368)
196 1vr6_A Phospho-2-dehydro-3-deo 59.7 1.1E+02 0.0038 28.3 12.2 120 123-261 118-240 (350)
197 3ozy_A Putative mandelate race 59.7 43 0.0015 31.5 9.6 127 123-261 177-323 (389)
198 1mdl_A Mandelate racemase; iso 59.6 29 0.00098 32.2 8.3 94 157-261 201-311 (359)
199 1vhc_A Putative KHG/KDPG aldol 59.4 86 0.0029 27.0 15.5 109 122-269 26-136 (224)
200 4fxs_A Inosine-5'-monophosphat 59.1 33 0.0011 33.5 8.9 70 131-201 286-363 (496)
201 3paj_A Nicotinate-nucleotide p 59.0 38 0.0013 31.1 8.6 58 133-201 246-303 (320)
202 1nu5_A Chloromuconate cycloiso 59.0 35 0.0012 31.8 8.7 99 157-260 200-315 (370)
203 1rd5_A Tryptophan synthase alp 58.8 93 0.0032 27.2 17.7 185 123-338 30-233 (262)
204 3qja_A IGPS, indole-3-glycerol 58.7 19 0.00066 32.2 6.6 30 172-201 213-242 (272)
205 2dsk_A Chitinase; catalytic do 58.7 35 0.0012 31.2 8.4 75 187-272 104-181 (311)
206 3n9r_A Fructose-bisphosphate a 58.6 1.1E+02 0.0037 27.9 12.1 158 122-294 25-199 (307)
207 1mzh_A Deoxyribose-phosphate a 58.6 88 0.003 26.8 13.1 127 122-270 17-152 (225)
208 1vrd_A Inosine-5'-monophosphat 58.5 95 0.0032 30.1 12.2 127 125-269 236-368 (494)
209 1fob_A Beta-1,4-galactanase; B 58.4 32 0.0011 31.7 8.2 65 171-241 18-82 (334)
210 3civ_A Endo-beta-1,4-mannanase 58.3 22 0.00075 33.0 7.1 25 217-241 95-119 (343)
211 1qap_A Quinolinic acid phospho 58.2 27 0.00092 31.7 7.5 42 158-201 239-280 (296)
212 3q58_A N-acetylmannosamine-6-p 58.0 25 0.00085 30.6 7.0 39 163-201 172-210 (229)
213 3a5v_A Alpha-galactosidase; be 58.0 26 0.00089 33.2 7.7 81 122-202 23-130 (397)
214 3tsm_A IGPS, indole-3-glycerol 58.0 27 0.00091 31.3 7.3 44 157-201 206-249 (272)
215 2cw6_A Hydroxymethylglutaryl-C 57.4 1.1E+02 0.0037 27.5 12.6 122 122-260 153-282 (298)
216 3l0g_A Nicotinate-nucleotide p 57.4 25 0.00085 32.0 7.0 58 133-201 222-279 (300)
217 1rvk_A Isomerase/lactonizing e 57.3 35 0.0012 31.9 8.5 80 157-238 212-309 (382)
218 1ep3_A Dihydroorotate dehydrog 57.2 32 0.0011 30.9 8.0 75 127-201 178-270 (311)
219 1h7n_A 5-aminolaevulinic acid 57.1 48 0.0016 30.4 8.8 50 122-171 66-122 (342)
220 4h3d_A 3-dehydroquinate dehydr 57.0 1E+02 0.0035 27.1 15.4 149 122-299 29-193 (258)
221 2qde_A Mandelate racemase/muco 56.9 20 0.00067 33.9 6.7 99 157-260 201-316 (397)
222 1qpo_A Quinolinate acid phosph 56.9 25 0.00085 31.7 7.0 43 158-201 225-269 (284)
223 3noy_A 4-hydroxy-3-methylbut-2 56.9 1.3E+02 0.0043 28.1 15.3 120 121-261 42-176 (366)
224 1vzw_A Phosphoribosyl isomeras 56.8 20 0.00069 31.1 6.3 68 130-201 151-222 (244)
225 3usb_A Inosine-5'-monophosphat 56.7 65 0.0022 31.6 10.6 126 126-270 256-388 (511)
226 3ddm_A Putative mandelate race 56.2 41 0.0014 31.7 8.7 129 123-261 181-327 (392)
227 2gou_A Oxidoreductase, FMN-bin 56.1 53 0.0018 30.7 9.4 73 123-201 248-322 (365)
228 1i4n_A Indole-3-glycerol phosp 56.0 1.1E+02 0.0036 27.0 12.6 135 171-340 100-235 (251)
229 3lye_A Oxaloacetate acetyl hyd 56.0 1.2E+02 0.0041 27.6 11.7 154 179-335 30-198 (307)
230 3igs_A N-acetylmannosamine-6-p 55.9 1E+02 0.0034 26.6 16.1 171 121-338 32-213 (232)
231 2poz_A Putative dehydratase; o 55.7 26 0.00088 33.0 7.3 99 157-261 211-326 (392)
232 3eeg_A 2-isopropylmalate synth 55.7 34 0.0012 31.4 7.9 22 123-144 149-170 (325)
233 2yw3_A 4-hydroxy-2-oxoglutarat 55.6 94 0.0032 26.3 18.1 171 123-352 23-193 (207)
234 2bdq_A Copper homeostasis prot 55.6 57 0.002 28.2 8.7 71 128-201 136-207 (224)
235 3fa4_A 2,3-dimethylmalate lyas 55.6 37 0.0013 30.9 7.9 67 121-193 131-204 (302)
236 3mqt_A Mandelate racemase/muco 55.5 31 0.001 32.6 7.8 127 123-261 182-328 (394)
237 3jr2_A Hexulose-6-phosphate sy 55.4 95 0.0033 26.3 14.8 176 122-337 16-196 (218)
238 3toy_A Mandelate racemase/muco 55.1 27 0.00091 32.9 7.2 110 123-240 195-323 (383)
239 4eiv_A Deoxyribose-phosphate a 55.0 84 0.0029 28.4 10.0 75 122-200 97-185 (297)
240 4avf_A Inosine-5'-monophosphat 55.0 54 0.0019 32.0 9.6 70 131-201 284-361 (490)
241 3igs_A N-acetylmannosamine-6-p 54.9 22 0.00077 30.9 6.2 39 163-201 172-210 (232)
242 2nql_A AGR_PAT_674P, isomerase 54.7 14 0.00048 34.9 5.2 98 157-260 220-334 (388)
243 2og9_A Mandelate racemase/muco 54.6 26 0.00088 33.1 7.1 81 157-239 219-316 (393)
244 3gka_A N-ethylmaleimide reduct 54.5 28 0.00097 32.5 7.2 17 158-174 249-265 (361)
245 1tkk_A Similar to chloromucona 54.5 77 0.0026 29.3 10.3 100 157-261 197-315 (366)
246 1chr_A Chloromuconate cycloiso 54.3 35 0.0012 31.8 7.9 97 159-260 202-315 (370)
247 3tqv_A Nicotinate-nucleotide p 54.2 31 0.0011 31.2 7.1 59 132-201 212-270 (287)
248 2zad_A Muconate cycloisomerase 54.1 34 0.0012 31.5 7.7 126 123-260 165-310 (345)
249 4e5t_A Mandelate racemase / mu 53.8 48 0.0016 31.4 8.8 99 156-260 219-334 (404)
250 1tqx_A D-ribulose-5-phosphate 53.8 39 0.0013 29.3 7.5 42 159-201 158-201 (227)
251 3tqk_A Phospho-2-dehydro-3-deo 53.7 1.1E+02 0.0038 28.2 10.7 184 51-261 12-255 (346)
252 1vyr_A Pentaerythritol tetrani 53.4 62 0.0021 30.1 9.4 73 123-201 249-323 (364)
253 3zwt_A Dihydroorotate dehydrog 53.3 78 0.0027 29.6 10.0 162 172-338 146-330 (367)
254 3q45_A Mandelate racemase/muco 53.1 39 0.0013 31.5 8.0 43 216-261 270-312 (368)
255 1jvn_A Glutamine, bifunctional 53.0 1.1E+02 0.0039 30.1 11.8 94 128-236 455-551 (555)
256 2oz8_A MLL7089 protein; struct 52.9 93 0.0032 29.1 10.7 23 216-238 274-296 (389)
257 2pp0_A L-talarate/galactarate 52.7 28 0.00096 32.9 7.0 80 157-238 232-328 (398)
258 4ab4_A Xenobiotic reductase B; 52.5 32 0.0011 32.2 7.2 35 158-192 241-276 (362)
259 3eoo_A Methylisocitrate lyase; 52.1 43 0.0015 30.4 7.7 68 121-193 134-205 (298)
260 1sfl_A 3-dehydroquinate dehydr 52.0 1.2E+02 0.004 26.3 13.4 152 122-301 14-181 (238)
261 3dip_A Enolase; structural gen 52.0 65 0.0022 30.5 9.4 99 156-261 224-340 (410)
262 1w8s_A FBP aldolase, fructose- 51.9 1.1E+02 0.0038 26.9 10.4 72 130-202 97-180 (263)
263 1vcv_A Probable deoxyribose-ph 51.8 1E+02 0.0034 26.7 9.8 73 122-196 125-211 (226)
264 1uas_A Alpha-galactosidase; TI 51.5 48 0.0016 30.8 8.3 81 122-202 23-131 (362)
265 2nli_A Lactate oxidase; flavoe 51.5 65 0.0022 30.1 9.2 70 131-201 243-313 (368)
266 2hzg_A Mandelate racemase/muco 51.4 34 0.0011 32.3 7.3 41 217-261 283-323 (401)
267 2p3z_A L-rhamnonate dehydratas 51.3 39 0.0013 32.2 7.8 82 157-238 234-331 (415)
268 1qo2_A Molecule: N-((5-phospho 51.2 17 0.0006 31.5 4.9 73 127-203 32-104 (241)
269 3s5o_A 4-hydroxy-2-oxoglutarat 51.2 75 0.0026 28.8 9.4 97 155-260 31-140 (307)
270 2fym_A Enolase; RNA degradosom 50.9 74 0.0025 30.3 9.7 116 122-257 267-385 (431)
271 2ekc_A AQ_1548, tryptophan syn 50.7 68 0.0023 28.2 8.9 79 122-201 131-234 (262)
272 3jva_A Dipeptide epimerase; en 50.7 73 0.0025 29.4 9.4 101 157-261 195-312 (354)
273 2o56_A Putative mandelate race 50.7 29 0.00098 32.9 6.7 99 157-261 227-342 (407)
274 2gl5_A Putative dehydratase pr 50.6 31 0.0011 32.6 7.0 99 157-261 230-345 (410)
275 3mkc_A Racemase; metabolic pro 50.3 32 0.0011 32.5 6.9 127 123-261 187-333 (394)
276 1ps9_A 2,4-dienoyl-COA reducta 50.2 37 0.0013 34.4 7.9 81 122-202 225-311 (671)
277 2gdq_A YITF; mandelate racemas 50.2 55 0.0019 30.6 8.6 99 157-261 196-312 (382)
278 1wv2_A Thiazole moeity, thiazo 50.0 1.4E+02 0.0046 26.5 10.3 79 119-201 116-216 (265)
279 3vnd_A TSA, tryptophan synthas 50.0 41 0.0014 30.0 7.2 43 159-201 192-235 (267)
280 4e4u_A Mandalate racemase/muco 50.0 52 0.0018 31.3 8.4 99 156-260 212-327 (412)
281 1vs1_A 3-deoxy-7-phosphoheptul 49.9 1.4E+02 0.0048 26.6 19.6 207 123-356 50-270 (276)
282 2nzl_A Hydroxyacid oxidase 1; 49.6 82 0.0028 29.7 9.6 70 131-201 266-336 (392)
283 3sgz_A Hydroxyacid oxidase 2; 49.4 99 0.0034 28.7 10.0 70 131-201 231-301 (352)
284 2b7n_A Probable nicotinate-nuc 49.4 30 0.001 31.0 6.2 65 123-201 191-257 (273)
285 1x1o_A Nicotinate-nucleotide p 49.2 62 0.0021 29.1 8.3 41 159-201 228-268 (286)
286 3r0u_A Enzyme of enolase super 49.1 45 0.0015 31.3 7.7 124 123-257 168-312 (379)
287 3gnn_A Nicotinate-nucleotide p 49.1 45 0.0015 30.2 7.3 61 131-202 222-282 (298)
288 3m6y_A 4-hydroxy-2-oxoglutarat 48.9 1.4E+02 0.0047 26.2 13.9 157 122-303 70-272 (275)
289 1rd5_A Tryptophan synthase alp 48.9 43 0.0015 29.4 7.2 43 159-201 187-230 (262)
290 3gr7_A NADPH dehydrogenase; fl 48.6 97 0.0033 28.5 9.8 83 119-201 131-249 (340)
291 2nx9_A Oxaloacetate decarboxyl 48.4 91 0.0031 30.2 9.9 115 123-259 156-276 (464)
292 3dx5_A Uncharacterized protein 48.4 1.1E+02 0.0036 26.7 9.9 125 127-257 17-162 (286)
293 2jbm_A Nicotinate-nucleotide p 48.4 24 0.00084 32.0 5.5 65 123-201 206-272 (299)
294 2ze3_A DFA0005; organic waste 48.3 1.5E+02 0.0051 26.4 11.9 118 176-301 18-138 (275)
295 3r2g_A Inosine 5'-monophosphat 48.3 49 0.0017 30.9 7.7 125 125-270 99-228 (361)
296 3fcp_A L-Ala-D/L-Glu epimerase 48.1 42 0.0014 31.5 7.3 127 123-260 175-320 (381)
297 3aty_A Tcoye, prostaglandin F2 48.1 61 0.0021 30.4 8.4 23 157-179 264-287 (379)
298 3q58_A N-acetylmannosamine-6-p 47.9 67 0.0023 27.8 8.1 104 132-254 95-200 (229)
299 3tj4_A Mandelate racemase; eno 47.8 46 0.0016 31.1 7.6 109 123-239 179-306 (372)
300 3usb_A Inosine-5'-monophosphat 47.7 67 0.0023 31.5 9.0 70 131-201 311-388 (511)
301 2ps2_A Putative mandelate race 47.6 41 0.0014 31.3 7.2 126 123-261 172-316 (371)
302 4a35_A Mitochondrial enolase s 47.6 1.5E+02 0.0053 28.2 11.4 22 217-238 335-356 (441)
303 3tha_A Tryptophan synthase alp 47.4 1.5E+02 0.005 26.1 11.2 65 158-228 184-249 (252)
304 2yxb_A Coenzyme B12-dependent 47.2 1.1E+02 0.0038 24.6 11.3 68 122-199 56-126 (161)
305 1kko_A 3-methylaspartate ammon 47.0 1.9E+02 0.0065 27.2 12.2 44 216-261 336-379 (413)
306 2r91_A 2-keto-3-deoxy-(6-phosp 47.0 84 0.0029 28.1 8.9 95 155-260 15-120 (286)
307 2hsa_B 12-oxophytodienoate red 46.9 74 0.0025 30.1 8.9 78 123-201 258-348 (402)
308 3l21_A DHDPS, dihydrodipicolin 46.8 1.1E+02 0.0037 27.6 9.8 120 122-253 33-165 (304)
309 3cyj_A Mandelate racemase/muco 46.5 62 0.0021 30.1 8.3 84 157-240 200-299 (372)
310 1sjd_A N-acylamino acid racema 46.4 1.1E+02 0.0037 28.3 10.0 41 216-260 268-308 (368)
311 3rr1_A GALD, putative D-galact 46.3 35 0.0012 32.4 6.6 40 217-260 265-304 (405)
312 1w3i_A EDA, 2-keto-3-deoxy glu 46.3 94 0.0032 27.9 9.2 95 155-260 16-121 (293)
313 3my9_A Muconate cycloisomerase 46.2 33 0.0011 32.1 6.3 42 217-261 278-319 (377)
314 1hjs_A Beta-1,4-galactanase; 4 46.2 21 0.00073 32.9 4.9 67 169-241 16-82 (332)
315 2wkj_A N-acetylneuraminate lya 46.1 1.4E+02 0.0049 26.8 10.5 120 122-253 29-162 (303)
316 3rys_A Adenosine deaminase 1; 46.0 1.7E+02 0.0059 26.8 11.1 97 122-237 146-246 (343)
317 3p3b_A Mandelate racemase/muco 46.0 83 0.0028 29.5 9.1 41 217-261 290-330 (392)
318 3vav_A 3-methyl-2-oxobutanoate 45.7 55 0.0019 29.3 7.2 67 123-200 104-192 (275)
319 3q94_A Fructose-bisphosphate a 45.6 1.7E+02 0.0058 26.3 10.9 117 128-255 93-227 (288)
320 1gvf_A Tagatose-bisphosphate a 45.6 1.7E+02 0.0057 26.3 12.3 188 122-332 26-229 (286)
321 3t6c_A RSPA, putative MAND fam 45.5 53 0.0018 31.5 7.7 43 216-260 326-368 (440)
322 2r14_A Morphinone reductase; H 45.5 49 0.0017 31.0 7.3 20 125-144 255-274 (377)
323 3cpr_A Dihydrodipicolinate syn 45.4 1.7E+02 0.0058 26.3 11.2 120 122-253 34-166 (304)
324 1xn7_A Hypothetical protein YH 45.0 78 0.0027 22.3 6.7 64 36-109 3-67 (78)
325 1yxy_A Putative N-acetylmannos 45.0 1.4E+02 0.0049 25.3 13.5 186 120-356 29-231 (234)
326 3nav_A Tryptophan synthase alp 45.0 54 0.0019 29.2 7.2 42 160-201 195-237 (271)
327 1n7k_A Deoxyribose-phosphate a 44.9 66 0.0023 28.0 7.5 75 122-200 145-220 (234)
328 3ugv_A Enolase; enzyme functio 44.8 31 0.0011 32.6 5.8 110 123-240 201-329 (390)
329 2nuw_A 2-keto-3-deoxygluconate 44.8 91 0.0031 27.9 8.8 95 155-260 16-121 (288)
330 1nvm_A HOA, 4-hydroxy-2-oxoval 44.7 76 0.0026 29.3 8.5 22 123-144 147-168 (345)
331 3sjn_A Mandelate racemase/muco 44.7 47 0.0016 31.0 7.1 127 123-261 175-321 (374)
332 3pm6_A Putative fructose-bisph 44.7 1.8E+02 0.0062 26.3 10.6 65 138-205 113-195 (306)
333 3dgb_A Muconate cycloisomerase 44.5 48 0.0016 31.1 7.1 99 157-260 206-321 (382)
334 3ijd_A Uncharacterized protein 44.5 80 0.0027 28.9 8.3 115 122-250 101-227 (315)
335 2qr6_A IMP dehydrogenase/GMP r 44.5 1.4E+02 0.0048 27.8 10.5 167 159-343 142-314 (393)
336 3eez_A Putative mandelate race 44.5 47 0.0016 31.1 7.0 41 217-260 273-313 (378)
337 1gvf_A Tagatose-bisphosphate a 44.4 1.5E+02 0.0051 26.6 10.0 113 132-254 91-222 (286)
338 1rqb_A Transcarboxylase 5S sub 44.4 1.4E+02 0.0047 29.5 10.5 116 123-260 173-296 (539)
339 4hty_A Cellulase; (alpha/beta) 44.3 1.5E+02 0.0051 27.2 10.5 128 180-310 84-228 (359)
340 3ik4_A Mandelate racemase/muco 44.2 45 0.0015 31.1 6.8 126 123-260 170-315 (365)
341 3khj_A Inosine-5-monophosphate 44.2 1.1E+02 0.0039 28.3 9.6 75 122-201 154-236 (361)
342 2qq6_A Mandelate racemase/muco 43.9 31 0.0011 32.7 5.8 99 157-261 222-337 (410)
343 1gox_A (S)-2-hydroxy-acid oxid 43.6 1E+02 0.0036 28.6 9.3 70 131-201 239-309 (370)
344 1o4u_A Type II quinolic acid p 43.2 21 0.00071 32.3 4.1 61 131-201 206-268 (285)
345 3o63_A Probable thiamine-phosp 43.2 1.7E+02 0.0056 25.5 15.1 180 127-353 45-235 (243)
346 3tva_A Xylose isomerase domain 43.1 1.4E+02 0.0047 26.0 9.8 83 122-205 99-186 (290)
347 3tqp_A Enolase; energy metabol 43.1 87 0.003 29.9 8.7 116 122-257 263-381 (428)
348 1xky_A Dihydrodipicolinate syn 43.1 1.5E+02 0.0053 26.5 10.1 120 122-253 30-162 (301)
349 3stp_A Galactonate dehydratase 43.0 40 0.0014 32.1 6.3 81 157-239 242-339 (412)
350 1o66_A 3-methyl-2-oxobutanoate 42.8 57 0.0019 29.2 6.8 67 123-200 93-180 (275)
351 3dg3_A Muconate cycloisomerase 42.8 33 0.0011 32.0 5.7 24 217-240 271-294 (367)
352 3tml_A 2-dehydro-3-deoxyphosph 42.7 1.3E+02 0.0046 26.9 9.4 120 123-261 29-158 (288)
353 2ox4_A Putative mandelate race 42.6 26 0.00089 33.1 5.0 99 157-261 221-336 (403)
354 4h83_A Mandelate racemase/muco 42.6 70 0.0024 30.0 8.0 22 216-237 296-317 (388)
355 3b8i_A PA4872 oxaloacetate dec 42.5 1.9E+02 0.0064 25.9 11.8 134 164-302 12-149 (287)
356 3v3w_A Starvation sensing prot 42.5 39 0.0013 32.2 6.2 103 156-260 237-354 (424)
357 1qo2_A Molecule: N-((5-phospho 42.5 54 0.0019 28.2 6.8 71 122-201 144-223 (241)
358 4ay7_A Methylcobalamin\: coenz 42.5 2E+02 0.0068 26.2 16.3 70 131-201 196-269 (348)
359 3hg3_A Alpha-galactosidase A; 42.3 61 0.0021 30.8 7.4 79 122-200 33-138 (404)
360 3r4e_A Mandelate racemase/muco 42.3 36 0.0012 32.5 5.9 102 157-260 232-348 (418)
361 1f76_A Dihydroorotate dehydrog 42.2 1.3E+02 0.0043 27.4 9.6 137 194-338 165-321 (336)
362 3vcn_A Mannonate dehydratase; 42.2 30 0.001 33.1 5.3 103 157-261 239-356 (425)
363 2hxt_A L-fuconate dehydratase; 42.1 1.1E+02 0.0037 29.2 9.4 82 157-238 254-351 (441)
364 3flu_A DHDPS, dihydrodipicolin 42.1 1.3E+02 0.0043 27.0 9.4 107 122-240 25-141 (297)
365 4fo4_A Inosine 5'-monophosphat 42.0 1.3E+02 0.0045 28.0 9.6 75 122-201 158-240 (366)
366 2yxg_A DHDPS, dihydrodipicolin 42.0 1.6E+02 0.0055 26.2 10.0 121 122-254 18-151 (289)
367 3sbf_A Mandelate racemase / mu 41.9 48 0.0017 31.3 6.7 43 216-260 287-329 (401)
368 3cwo_X Beta/alpha-barrel prote 41.6 1.5E+02 0.0051 24.5 12.6 99 128-241 133-233 (237)
369 3a5f_A Dihydrodipicolinate syn 41.3 1.7E+02 0.0057 26.1 10.0 107 122-240 19-135 (291)
370 1szn_A Alpha-galactosidase; (b 41.3 74 0.0025 30.2 8.0 82 122-203 26-134 (417)
371 1zlp_A PSR132, petal death pro 41.2 82 0.0028 28.8 7.8 89 124-232 188-279 (318)
372 3daq_A DHDPS, dihydrodipicolin 41.1 1.2E+02 0.0042 27.0 9.1 121 121-253 19-152 (292)
373 3i6e_A Muconate cycloisomerase 40.9 41 0.0014 31.6 6.0 42 217-261 279-320 (385)
374 1f6k_A N-acetylneuraminate lya 40.8 2E+02 0.0067 25.7 10.6 120 122-253 21-154 (293)
375 3qze_A DHDPS, dihydrodipicolin 40.7 1.2E+02 0.0042 27.5 9.1 120 122-253 41-173 (314)
376 2p8b_A Mandelate racemase/muco 40.6 60 0.0021 30.1 7.2 99 158-261 198-314 (369)
377 1ht6_A AMY1, alpha-amylase iso 40.4 22 0.00075 33.7 4.1 72 157-243 19-93 (405)
378 3tcs_A Racemase, putative; PSI 40.2 81 0.0028 29.6 8.0 81 157-239 211-308 (388)
379 3rr1_A GALD, putative D-galact 40.2 1.5E+02 0.005 28.0 9.8 78 122-199 124-210 (405)
380 1i60_A IOLI protein; beta barr 40.1 1.8E+02 0.006 24.9 10.1 83 123-205 82-176 (278)
381 1wuf_A Hypothetical protein LI 40.1 38 0.0013 31.9 5.7 39 216-257 287-325 (393)
382 3n9r_A Fructose-bisphosphate a 40.1 2.1E+02 0.0073 25.9 11.6 70 133-205 92-179 (307)
383 4dxk_A Mandelate racemase / mu 40.1 58 0.002 30.7 7.0 99 156-260 221-336 (400)
384 2ze3_A DFA0005; organic waste 40.1 1.1E+02 0.0036 27.4 8.3 68 124-205 167-236 (275)
385 2htm_A Thiazole biosynthesis p 40.1 1.6E+02 0.0055 26.1 9.2 29 173-201 179-207 (268)
386 1eep_A Inosine 5'-monophosphat 40.0 1.1E+02 0.0038 28.7 9.0 71 130-201 207-285 (404)
387 2f6u_A GGGPS, (S)-3-O-geranylg 40.0 1.6E+02 0.0056 25.5 9.3 69 123-201 147-218 (234)
388 2r8w_A AGR_C_1641P; APC7498, d 39.9 1.6E+02 0.0056 26.8 9.9 120 122-253 52-184 (332)
389 1viz_A PCRB protein homolog; s 39.9 1.4E+02 0.0049 25.9 9.0 69 123-201 140-210 (240)
390 2ztj_A Homocitrate synthase; ( 39.7 67 0.0023 30.2 7.3 33 157-190 143-178 (382)
391 2dh2_A 4F2 cell-surface antige 39.7 20 0.00067 34.3 3.6 54 216-271 79-143 (424)
392 3e96_A Dihydrodipicolinate syn 39.7 2.1E+02 0.0073 25.8 12.8 115 122-249 30-153 (316)
393 2ojp_A DHDPS, dihydrodipicolin 39.6 1.3E+02 0.0045 26.8 9.0 120 122-253 19-151 (292)
394 4hpn_A Putative uncharacterize 39.5 71 0.0024 29.7 7.5 127 123-261 170-315 (378)
395 4hnl_A Mandelate racemase/muco 39.5 46 0.0016 31.6 6.2 43 216-260 307-349 (421)
396 1kbi_A Cytochrome B2, L-LCR; f 39.4 1.5E+02 0.0051 29.0 10.0 72 131-202 357-433 (511)
397 3tak_A DHDPS, dihydrodipicolin 39.3 1.3E+02 0.0045 26.8 9.0 107 122-240 19-135 (291)
398 3ivs_A Homocitrate synthase, m 39.3 1.1E+02 0.0039 29.1 8.8 106 125-245 151-261 (423)
399 1o5k_A DHDPS, dihydrodipicolin 39.3 1.7E+02 0.0058 26.3 9.8 121 122-254 30-163 (306)
400 3fkr_A L-2-keto-3-deoxyarabona 39.2 1.3E+02 0.0043 27.3 8.9 107 122-237 26-142 (309)
401 4fnq_A Alpha-galactosidase AGA 39.2 59 0.002 33.5 7.3 53 122-174 343-407 (729)
402 2agk_A 1-(5-phosphoribosyl)-5- 39.1 80 0.0028 27.8 7.4 200 128-357 41-260 (260)
403 1vrd_A Inosine-5'-monophosphat 39.1 1.2E+02 0.0041 29.3 9.3 69 132-201 293-369 (494)
404 3l21_A DHDPS, dihydrodipicolin 39.0 1.9E+02 0.0064 26.0 10.0 106 155-273 32-148 (304)
405 2q02_A Putative cytoplasmic pr 39.0 1E+02 0.0036 26.4 8.2 81 124-205 84-172 (272)
406 3tji_A Mandelate racemase/muco 38.9 52 0.0018 31.4 6.5 100 157-260 234-350 (422)
407 3dz1_A Dihydrodipicolinate syn 38.9 75 0.0026 28.9 7.3 96 155-260 25-130 (313)
408 3m5v_A DHDPS, dihydrodipicolin 38.9 95 0.0033 27.9 8.0 97 155-260 24-132 (301)
409 4ef8_A Dihydroorotate dehydrog 38.8 1.5E+02 0.0052 27.4 9.5 79 122-201 204-306 (354)
410 3s83_A Ggdef family protein; s 38.8 1.9E+02 0.0064 24.8 10.1 93 157-261 137-230 (259)
411 1ub3_A Aldolase protein; schif 38.8 1.9E+02 0.0063 24.8 18.5 178 121-332 15-202 (220)
412 2ehh_A DHDPS, dihydrodipicolin 38.6 1.8E+02 0.0061 26.0 9.8 121 122-254 18-151 (294)
413 3pao_A Adenosine deaminase; st 38.5 1.9E+02 0.0064 26.4 10.0 43 162-204 180-224 (326)
414 2qdd_A Mandelate racemase/muco 38.4 1.3E+02 0.0046 27.8 9.2 43 216-261 272-314 (378)
415 1lwj_A 4-alpha-glucanotransfer 38.4 23 0.00079 33.8 3.9 75 157-246 21-98 (441)
416 2vc6_A MOSA, dihydrodipicolina 38.2 2.2E+02 0.0074 25.4 10.4 97 184-298 24-121 (292)
417 1gcy_A Glucan 1,4-alpha-maltot 38.1 45 0.0015 32.7 6.1 77 159-243 37-117 (527)
418 1yad_A Regulatory protein TENI 38.0 86 0.003 26.5 7.3 74 122-201 118-192 (221)
419 1s2w_A Phosphoenolpyruvate pho 37.9 1.5E+02 0.0051 26.7 9.0 21 124-144 169-189 (295)
420 2v9d_A YAGE; dihydrodipicolini 37.8 1.7E+02 0.0057 26.9 9.6 121 122-254 49-182 (343)
421 3uj2_A Enolase 1; enzyme funct 37.7 89 0.0031 30.1 7.9 116 122-257 289-407 (449)
422 3bw2_A 2-nitropropane dioxygen 37.7 88 0.003 29.0 7.8 70 131-201 158-237 (369)
423 3b4u_A Dihydrodipicolinate syn 37.6 1.2E+02 0.0042 27.1 8.5 97 155-260 20-128 (294)
424 1p0k_A Isopentenyl-diphosphate 37.5 1.4E+02 0.0046 27.4 9.0 30 172-201 251-280 (349)
425 1vcf_A Isopentenyl-diphosphate 37.5 2.3E+02 0.008 25.6 11.6 140 184-340 135-290 (332)
426 2o9p_A Beta-glucosidase B; fam 37.5 46 0.0016 32.1 5.8 56 183-240 69-127 (454)
427 3mwc_A Mandelate racemase/muco 37.4 45 0.0015 31.5 5.7 39 217-258 291-329 (400)
428 3dz1_A Dihydrodipicolinate syn 37.4 1.6E+02 0.0055 26.6 9.3 107 122-241 26-143 (313)
429 3m5v_A DHDPS, dihydrodipicolin 37.3 1.4E+02 0.0046 26.9 8.8 121 122-254 25-159 (301)
430 3i65_A Dihydroorotate dehydrog 37.1 2.8E+02 0.0094 26.3 13.5 200 158-362 159-405 (415)
431 3si9_A DHDPS, dihydrodipicolin 37.1 1.2E+02 0.0042 27.5 8.5 120 122-253 40-172 (315)
432 2v9d_A YAGE; dihydrodipicolini 37.1 1.9E+02 0.0065 26.5 9.9 97 155-260 48-155 (343)
433 4dye_A Isomerase; enolase fami 37.0 1.1E+02 0.0038 28.8 8.4 98 157-260 224-337 (398)
434 1ug6_A Beta-glycosidase; gluco 37.0 60 0.002 31.1 6.5 57 183-240 59-118 (431)
435 3d0c_A Dihydrodipicolinate syn 37.0 1.1E+02 0.0037 27.8 8.1 119 122-253 30-157 (314)
436 3n9k_A Glucan 1,3-beta-glucosi 36.9 1.4E+02 0.0047 28.2 9.0 56 182-240 74-134 (399)
437 1xg4_A Probable methylisocitra 36.8 98 0.0033 27.9 7.6 89 124-232 166-257 (295)
438 3w01_A Heptaprenylglyceryl pho 36.8 2.1E+02 0.0071 24.8 9.9 70 122-201 142-214 (235)
439 1twd_A Copper homeostasis prot 36.8 75 0.0026 28.1 6.6 67 130-202 133-199 (256)
440 3qfe_A Putative dihydrodipicol 36.8 1.4E+02 0.0047 27.2 8.8 99 184-298 35-134 (318)
441 2k02_A Ferrous iron transport 36.8 72 0.0025 23.1 5.4 64 36-109 3-67 (87)
442 3o63_A Probable thiamine-phosp 36.7 49 0.0017 29.0 5.4 74 122-201 143-219 (243)
443 2wkj_A N-acetylneuraminate lya 36.6 2.1E+02 0.0072 25.6 10.0 97 155-260 28-135 (303)
444 3ffs_A Inosine-5-monophosphate 36.6 1.4E+02 0.0047 28.3 8.9 75 122-201 193-275 (400)
445 3o1n_A 3-dehydroquinate dehydr 36.6 2.3E+02 0.0078 25.2 21.7 149 122-299 49-213 (276)
446 3ahy_A Beta-glucosidase; cellu 36.4 61 0.0021 31.5 6.5 58 182-240 63-125 (473)
447 3aty_A Tcoye, prostaglandin F2 36.4 1.5E+02 0.0052 27.6 9.2 84 119-202 160-287 (379)
448 3fs2_A 2-dehydro-3-deoxyphosph 36.3 1.5E+02 0.0053 26.7 8.8 120 123-261 53-182 (298)
449 1u83_A Phosphosulfolactate syn 36.3 1.5E+02 0.0051 26.4 8.4 98 127-234 82-187 (276)
450 4dpp_A DHDPS 2, dihydrodipicol 36.1 2E+02 0.0068 26.7 9.8 98 122-231 77-183 (360)
451 1ur4_A Galactanase; hydrolase, 36.1 41 0.0014 31.9 5.1 58 184-241 51-111 (399)
452 1icp_A OPR1, 12-oxophytodienoa 36.1 38 0.0013 31.8 4.9 24 157-180 254-278 (376)
453 4af0_A Inosine-5'-monophosphat 36.1 2.1E+02 0.0073 28.2 10.2 128 183-336 282-414 (556)
454 3cpr_A Dihydrodipicolinate syn 36.1 1.4E+02 0.0048 26.8 8.7 97 155-260 33-140 (304)
455 1r0m_A N-acylamino acid racema 36.0 53 0.0018 30.6 6.0 41 216-260 274-314 (375)
456 3gd6_A Muconate cycloisomerase 36.0 71 0.0024 30.0 6.9 127 123-260 168-314 (391)
457 3rcy_A Mandelate racemase/muco 36.0 60 0.0021 31.1 6.4 99 156-260 214-329 (433)
458 3ahx_A Beta-glucosidase A; cel 35.9 66 0.0023 31.0 6.7 57 183-240 61-120 (453)
459 3s5s_A Mandelate racemase/muco 35.9 49 0.0017 31.1 5.7 99 157-260 200-316 (389)
460 3b4u_A Dihydrodipicolinate syn 35.9 1.2E+02 0.0042 27.1 8.2 122 122-254 21-158 (294)
461 2z1k_A (NEO)pullulanase; hydro 35.9 21 0.00073 34.4 3.3 80 158-252 49-131 (475)
462 3lmz_A Putative sugar isomeras 35.8 2E+02 0.007 24.4 10.7 114 122-255 30-152 (257)
463 3f4w_A Putative hexulose 6 pho 35.8 1.6E+02 0.0056 24.3 8.7 63 131-201 70-134 (211)
464 1v08_A Beta-glucosidase; glyco 35.6 69 0.0024 31.4 6.8 57 183-240 80-141 (512)
465 2rfg_A Dihydrodipicolinate syn 35.5 1.6E+02 0.0053 26.4 8.9 120 122-253 18-150 (297)
466 1yx1_A Hypothetical protein PA 35.5 62 0.0021 28.0 6.1 93 162-261 26-125 (264)
467 2qv5_A AGR_C_5032P, uncharacte 35.4 1.5E+02 0.005 26.3 8.4 136 122-274 107-249 (261)
468 3c2e_A Nicotinate-nucleotide p 35.4 19 0.00065 32.7 2.6 42 159-201 231-277 (294)
469 3qc0_A Sugar isomerase; TIM ba 35.4 79 0.0027 27.2 6.8 74 184-271 21-104 (275)
470 3sz8_A 2-dehydro-3-deoxyphosph 35.3 1.4E+02 0.0047 26.9 8.2 120 123-261 32-161 (285)
471 1jcn_A Inosine monophosphate d 35.3 1E+02 0.0036 30.0 8.2 69 126-202 255-325 (514)
472 1s2w_A Phosphoenolpyruvate pho 35.0 2.5E+02 0.0085 25.2 10.6 122 177-302 22-149 (295)
473 1m3u_A 3-methyl-2-oxobutanoate 35.0 78 0.0027 28.1 6.5 109 122-234 60-176 (264)
474 1ea9_C Cyclomaltodextrinase; h 35.0 32 0.0011 34.3 4.5 32 216-247 216-248 (583)
475 3s5o_A 4-hydroxy-2-oxoglutarat 34.9 1.4E+02 0.0046 27.0 8.4 122 122-253 32-166 (307)
476 4aie_A Glucan 1,6-alpha-glucos 34.8 21 0.00071 35.0 3.0 30 216-245 77-107 (549)
477 4do4_A Alpha-N-acetylgalactosa 34.7 78 0.0027 29.5 7.0 100 98-201 13-139 (400)
478 1yad_A Regulatory protein TENI 34.7 2E+02 0.0069 24.0 14.9 167 123-340 28-197 (221)
479 1vcf_A Isopentenyl-diphosphate 34.6 1.1E+02 0.0037 27.9 7.7 72 122-202 193-286 (332)
480 3l5a_A NADH/flavin oxidoreduct 34.6 77 0.0026 30.2 6.8 24 123-146 262-286 (419)
481 2dga_A Beta-glucosidase; alpha 34.5 70 0.0024 31.8 6.7 56 183-239 130-188 (565)
482 3ro6_B Putative chloromuconate 34.4 29 0.00099 32.2 3.8 42 217-261 272-313 (356)
483 2qul_A D-tagatose 3-epimerase; 34.4 2.2E+02 0.0077 24.4 10.1 18 342-359 223-240 (290)
484 2e3z_A Beta-glucosidase; TIM b 34.4 71 0.0024 30.9 6.6 57 182-239 63-124 (465)
485 1z41_A YQJM, probable NADH-dep 34.3 1.5E+02 0.0052 27.0 8.8 83 120-202 132-250 (338)
486 1qop_A Tryptophan synthase alp 34.3 98 0.0033 27.3 7.2 42 160-201 192-234 (268)
487 3glc_A Aldolase LSRF; TIM barr 34.3 2.6E+02 0.0088 25.1 11.6 70 131-201 131-209 (295)
488 3bo9_A Putative nitroalkan dio 34.3 1.2E+02 0.0041 27.6 7.9 66 132-201 138-205 (326)
489 1lt8_A Betaine-homocysteine me 34.2 1.1E+02 0.0036 29.1 7.7 12 247-258 221-232 (406)
490 2chr_A Chloromuconate cycloiso 34.1 63 0.0021 30.0 6.1 128 122-260 169-315 (370)
491 1e4i_A Beta-glucosidase; hydro 34.1 77 0.0026 30.5 6.8 57 183-240 60-119 (447)
492 1v02_A Dhurrinase, dhurrinase- 33.8 76 0.0026 31.6 6.8 56 183-239 132-192 (565)
493 3jr2_A Hexulose-6-phosphate sy 33.8 14 0.00049 31.6 1.4 40 161-201 155-194 (218)
494 3na8_A Putative dihydrodipicol 33.7 2.7E+02 0.0091 25.1 13.3 108 122-241 42-159 (315)
495 2c6q_A GMP reductase 2; TIM ba 33.6 2.2E+02 0.0076 26.1 9.8 75 122-201 170-252 (351)
496 3a5f_A Dihydrodipicolinate syn 33.6 1.2E+02 0.0042 27.0 7.8 96 156-260 19-125 (291)
497 3bg3_A Pyruvate carboxylase, m 33.6 1.5E+02 0.0051 30.4 9.1 116 122-259 258-380 (718)
498 3e96_A Dihydrodipicolinate syn 33.4 77 0.0026 28.8 6.4 96 155-260 29-135 (316)
499 3iwp_A Copper homeostasis prot 33.4 1.5E+02 0.0053 26.5 8.2 71 129-204 170-241 (287)
500 2qw5_A Xylose isomerase-like T 33.3 2.6E+02 0.0089 24.9 14.0 47 126-174 32-80 (335)
No 1
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=100.00 E-value=2.1e-47 Score=369.01 Aligned_cols=318 Identities=18% Similarity=0.309 Sum_probs=276.9
Q ss_pred HHHHHHHHhhcCCCCCCCHHHHHHhcCCC---hHHHHHHHHHHHHhhcCCCeeEEEEeeeecCCCCCcCCCCCCCCCCCC
Q 016599 37 AAIEAERTIREGPRHDWSKDDIKSIYDSP---VLDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYD 113 (386)
Q Consensus 37 ~~~~~~~~~~~~~~~~ls~ee~~~l~~~~---~~~~l~~aa~~~r~~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~ 113 (386)
+.+|.+|+.+ +++||++|++.||+.+ ..+.+..+|+..|++++|+.++++.++++ |++|+.+|.||+++...
T Consensus 10 ~~~i~~k~~~---~~~l~~~e~~~l~~~~~~~~~~~L~~~A~~~r~~~~g~~v~~~~~i~~-t~~C~~~C~fC~~~~~~- 84 (350)
T 3t7v_A 10 FDSLGDKVIE---GYQLTDNDLRTLLSLESKEGLERLYSAARKVRDHYFGNRVFLNCFIYF-STYCKNQCSFCYYNCRN- 84 (350)
T ss_dssp --CHHHHHHT---TCCCCHHHHHHHHTCCSHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEE-ECCCCCCCTTCTTCTTS-
T ss_pred HHHHHHHHHc---CCCCCHHHHHHHhcCCChhHHHHHHHHHHHHHHHHCCCEEEEEEeeec-CCCcCCCCCcCCCcCcC-
Confidence 4678999999 9999999999999853 45667777777888888999999999998 99999999999997543
Q ss_pred CCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhh---HHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHH
Q 016599 114 TGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTN---FNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIE 189 (386)
Q Consensus 114 ~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~---~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~ 189 (386)
...++. ++++||++.++.+.+.|++.|+++||.. |.. .+++.++++.+++ .++.+++++|.++++.++.
T Consensus 85 -~~~~~~-ls~eei~~~~~~~~~~G~~~i~l~gGe~-----p~~~~~~~~~~~l~~~ik~~~~i~i~~s~g~~~~e~l~~ 157 (350)
T 3t7v_A 85 -EINRYR-LTMEEIKETCKTLKGAGFHMVDLTMGED-----PYYYEDPNRFVELVQIVKEELGLPIMISPGLMDNATLLK 157 (350)
T ss_dssp -CCCCCB-CCHHHHHHHHHHHTTSCCSEEEEEECCC-----HHHHHSTHHHHHHHHHHHHHHCSCEEEECSSCCHHHHHH
T ss_pred -CCCcee-CCHHHHHHHHHHHHHCCCCEEEEeeCCC-----CccccCHHHHHHHHHHHHhhcCceEEEeCCCCCHHHHHH
Confidence 334455 8999999999999999999999977542 332 4788999999984 5788888999999999999
Q ss_pred HHHhccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEe
Q 016599 190 LKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVP 268 (386)
Q Consensus 190 Lk~aG~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~ 268 (386)
|+++|++++.+++|++ +++|+.+++++++++++++++.++++|+.+++++|+|+|||.+|+.++++++++++ +++++
T Consensus 158 L~~aG~~~i~i~lEt~~~~~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e~~~~~l~~l~~l~--~~~v~ 235 (350)
T 3t7v_A 158 AREKGANFLALYQETYDTELYRKLRVGQSFDGRVNARRFAKQQGYCVEDGILTGVGNDIESTILSLRGMSTND--PDMVR 235 (350)
T ss_dssp HHHTTEEEEECCCBCSCHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEEEESSSCCHHHHHHHHHHHHHTC--CSEEE
T ss_pred HHHcCCCEEEEeeecCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCeEccceEeecCCCHHHHHHHHHHHHhCC--CCEEE
Confidence 9999999999999999 99999999999999999999999999999999999999999999999999999996 88999
Q ss_pred eeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccc---cCCc----cccC
Q 016599 269 INALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIF---TGEK----LLTT 341 (386)
Q Consensus 269 ~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~---~g~~----~~t~ 341 (386)
+++|+|.|||++.+.++++.++++++++++|+++|+. +|++.|...+.+..+.+|.+|||+++ ..+. ....
T Consensus 236 ~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~--~I~a~~~~~g~~~~~~~l~~Gan~~~~~~~~~~~~ag~~~~ 313 (350)
T 3t7v_A 236 VMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKR--LIPASLDLEGIDGMVLRLNAGANIVTSILPPDSQLEGVANY 313 (350)
T ss_dssp EEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTS--BCEEEHHHHHHHHHHHHHHTTCCEEEEECCSSCCCCCSSCT
T ss_pred ecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCc--CccccccccChhHHHHHHhcCCceecCCCCCCCCCCCCCCC
Confidence 9999999999999988899999999999999999995 56667877766778999999999983 3331 1111
Q ss_pred ------CCCChhHHHHHHHHcCCCcCCCCCccccc
Q 016599 342 ------PNNDFDADQLMFKVLGLTPKAPSFHEGEA 370 (386)
Q Consensus 342 ------~~~~~~~~~~~i~~~G~~p~~~~~~~~~~ 370 (386)
..++.+++.++|+++||+|++|++.|+..
T Consensus 314 ~~~~~~~~~~~~~~~~~i~~~G~~~~~r~~~y~~~ 348 (350)
T 3t7v_A 314 DRDLEERDRDIKSVVRRLEIMGMKPARQADFEAVL 348 (350)
T ss_dssp TTTCSSCCCCHHHHHHHHHHHTCEECCHHHHHTTC
T ss_pred cccchhccCCHHHHHHHHHHcCCccccHHHHHHHh
Confidence 24789999999999999999999999875
No 2
>1r30_A Biotin synthase; SAM radical protein, TIM barrel, FES cluster, transferase; HET: SAM DTB; 3.40A {Escherichia coli} SCOP: c.1.28.1
Probab=100.00 E-value=3.8e-46 Score=362.61 Aligned_cols=318 Identities=55% Similarity=0.946 Sum_probs=281.7
Q ss_pred hcCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHhhcCCCeeEEEEeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHH
Q 016599 46 REGPRHDWSKDDIKSIYDSPVLDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKD 125 (386)
Q Consensus 46 ~~~~~~~ls~ee~~~l~~~~~~~~l~~aa~~~r~~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~e 125 (386)
.+.+.++||.+|+..|++.|..+++..|..++++++.|+++.++.++++.|++|+++|.||+++.....+..+++.++++
T Consensus 23 ~~~~~~~ls~~e~~~l~~~~~~~L~~~A~~~~~~~~~~~~v~~~~~i~i~t~~C~~~C~yC~~~~~~~~~~~~~~~~s~e 102 (369)
T 1r30_A 23 GSAHRPRWTLSQVTELFEKPLLDLLFEAQQVHRQHFDPRQVQVSTLLSIKTGACPEDCKYCPQSSRYKTGLEAERLMEVE 102 (369)
T ss_dssp ----CCCCCSTTTHHHHHSCHHHHHHHHHHHHHHHSCTTCCEEEEEEEEECSCBSSCCSSCSCBTTSCTTCCCCCCCCHH
T ss_pred cccccCCCCHHHHHHHHhccHHHHHHHHHHHHHHhcCCCEEEEEEEEEEECCCCcccCccCCCCCcCCCCCcccccCCHH
Confidence 34457889999999999988888887777776666657889888888866999999999999886432233345668999
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecccCch
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 205 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~ 205 (386)
+|++.++.+.+.|++.|+++||+.. +.+..++++.++++.+++.++++++++|.++++.++.|+++|++++++++|+.
T Consensus 103 ei~~~~~~~~~~g~~~i~~~gg~~~--p~~~~~~~l~~ll~~ik~~g~~i~~t~G~l~~e~l~~L~~aGvd~v~i~les~ 180 (369)
T 1r30_A 103 QVLESARKAKAAGSTRFCMGAAWKN--PHERDMPYLEQMVQGVKAMGLEACMTLGTLSESQAQRLANAGLDYYNHNLDTS 180 (369)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECCSS--CCTTTHHHHHHHHHHHHHTTSEEEEECSSCCHHHHHHHHHHCCCEEECCCBSC
T ss_pred HHHHHHHHHHHcCCcEEEEEeCCCC--CCcCCHHHHHHHHHHHHHcCCeEEEecCCCCHHHHHHHHHCCCCEEeecCcCC
Confidence 9999999998899999999876522 22356789999999999889998889999999999999999999999999998
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCC
Q 016599 206 REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKP 285 (386)
Q Consensus 206 ~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~ 285 (386)
++.|+++++++++++++++++.++++|+.+++++|+|+|||.+++.++++++++++.++++++++.|+|.|||++.+.++
T Consensus 181 ~e~~~~i~~~~~~~~~l~~i~~a~~~Gi~v~~~~I~Gl~et~ed~~~~l~~l~~l~~~~~~i~~~~l~p~~gT~l~~~~~ 260 (369)
T 1r30_A 181 PEFYGNIITTRTYQERLDTLEKVRDAGIKVCSGGIVGLGETVKDRAGLLLQLANLPTPPESVPINMLVKVKGTPLADNDD 260 (369)
T ss_dssp HHHHHHHCCSSCHHHHHHHHHHHHHHHCEEECCEEECSSCCHHHHHHHHHHHHSSSSCCSEEEEEECCCCTTSTTSSCCC
T ss_pred HHHHHHhCCCCCHHHHHHHHHHHHHcCCeeeeeeEeeCCCCHHHHHHHHHHHHhhcCCCCEEEeeeeeecCCCcCCCCCC
Confidence 88999999989999999999999999999999999999999999999999999996447899999999999999998888
Q ss_pred CCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHHcCCCcCCCCC
Q 016599 286 VEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLTPKAPSF 365 (386)
Q Consensus 286 ~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~~G~~p~~~~~ 365 (386)
++.++++++++++|.++|+..++++++|.++++..++.+|.+|||+++.|+++.++.+++++++.++|+++|+.|.+|..
T Consensus 261 ~~~~~~~~~~~~~r~~l~~~~i~i~~~~~~l~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~~g~~~~~~~~ 340 (369)
T 1r30_A 261 VDAFDFIRTIAVARIMMPTSYVRLSAGREQMNEQTQAMCFMAGANSIFYGCKLLTTPNPEEDKDLQLFRKLGLNPQQTAV 340 (369)
T ss_dssp CCHHHHHHHHHHHHHHCTTSEEEEESSGGGSCHHHHHHHHHHTCCEEECSSBSSSSBCCCHHHHHHHHHHTTCCSCCCC-
T ss_pred CCHHHHHHHHHHHHHhCCCCceEeecchhhcChHHHHHHhhCCCceEEeCCeeeCCCCCCHHHHHHHHHHcCCCeecccc
Confidence 99999999999999999998899999999988888899999999999999989999999999999999999999999975
No 3
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=100.00 E-value=2.1e-41 Score=326.75 Aligned_cols=314 Identities=22% Similarity=0.314 Sum_probs=271.3
Q ss_pred HHHHHHHHhhcCCCCCCCHHHHHHhcCCCh---HHHHHHHHHHHHhhcCCCeeEEEEeeeecCCCCCcCCCCCCCCCCCC
Q 016599 37 AAIEAERTIREGPRHDWSKDDIKSIYDSPV---LDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYD 113 (386)
Q Consensus 37 ~~~~~~~~~~~~~~~~ls~ee~~~l~~~~~---~~~l~~aa~~~r~~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~ 113 (386)
+.++.+|+.+ ++||++|+..|++.++ .+.+..+|+..|++++|++++++.++++ |++||++|.||+++...
T Consensus 3 ~~~i~~k~~~----~~l~~~e~~~ll~~~~~~~~~~l~~~A~~ir~~~~g~~v~~~~~i~~-t~~C~~~C~fC~~~~~~- 76 (348)
T 3iix_A 3 GREILEKLER----REFTREVLKEALSINDRGFNEALFKLADEIRRKYVGDEVHIRAIIEF-SNVCRKNCLYCGLRRDN- 76 (348)
T ss_dssp HHHHHHHHHT----TCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCSEEEEEEEEEE-ECCCSCCCTTCTTCTTC-
T ss_pred HHHHHHHHHh----CCCCHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHcCCEEEEEEEeEe-cCCcCCcCccCCCCCCC-
Confidence 4677888776 5799999999997643 4456777777777778999999999999 99999999999987542
Q ss_pred CCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHh
Q 016599 114 TGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 114 ~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
....++. +++++|++.++.+.+.|++.|+++||..+. ...+++.++++.+++.++.+.+++|.++++.++.|+++
T Consensus 77 ~~~~~~~-ls~eei~~~i~~~~~~g~~~i~~~gGe~p~----~~~~~~~~li~~i~~~~~~i~~s~g~l~~e~l~~L~~a 151 (348)
T 3iix_A 77 KNLKRYR-MTPEEIVERARLAVQFGAKTIVLQSGEDPY----XMPDVISDIVKEIKKMGVAVTLSLGEWPREYYEKWKEA 151 (348)
T ss_dssp CSSCCCB-CCHHHHHHHHHHHHHTTCSEEEEEESCCGG----GTTHHHHHHHHHHHTTSCEEEEECCCCCHHHHHHHHHH
T ss_pred CCcCcee-CCHHHHHHHHHHHHHCCCCEEEEEeCCCCC----ccHHHHHHHHHHHHhcCceEEEecCCCCHHHHHHHHHh
Confidence 2334444 899999999999999999999998754221 23388999999999778888889999999999999999
Q ss_pred ccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeeee
Q 016599 194 GLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 194 G~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~ 271 (386)
|++++.+++|+. +++|+.+++++++++++++++.++++|+.+++++|+|+ |+|.+++.++++++++++ ++.+.+++
T Consensus 152 g~~~v~i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~~~l~~l~--~~~i~i~~ 229 (348)
T 3iix_A 152 GADRYLLRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDLLFLKEHD--FDMVGIGP 229 (348)
T ss_dssp TCCEEECCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHHHHHHHHT--CSEECCEE
T ss_pred CCCEEeeeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHHHHHHhcC--CCEEeeee
Confidence 999999999999 99999999989999999999999999999999999999 999999999999999996 88999999
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccC----C----------c
Q 016599 272 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTG----E----------K 337 (386)
Q Consensus 272 f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g----~----------~ 337 (386)
|+|.|||++.+.++++.++++++++++|+++|+..|+++++|..+++..+..+|.+|||++++. . +
T Consensus 230 ~~p~~gt~l~~~~~~~~~e~~~~~a~~R~~lp~~~i~~~~~~~~~~~~~~~~~l~~Gan~i~~~~~~~~~~~~~~~~~~~ 309 (348)
T 3iix_A 230 FIPHPDTPLANEKKGDFTLTLKMVALTRILLPDSNIPATTAMGTIVPGGREITLRCGANVIMPNWTPSPYRQLYQLYPGK 309 (348)
T ss_dssp CCCCTTSTTTTSCCCCHHHHHHHHHHHHHHSTTSBCBCCHHHHHHSTTHHHHHHTTTCCEECCBCCCTTTGGGCCSSSCC
T ss_pred eecCCCCCcccCCCCCHHHHHHHHHHHHHHCCCCCchhcchhhhcCHHHHHHHHhcCCcEEeCCCCchhcccccccCCCC
Confidence 9999999999988999999999999999999998888888898888888999999999999732 0 1
Q ss_pred ccc--CCCCChhHHHHHHHHcCCCcCCC
Q 016599 338 LLT--TPNNDFDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 338 ~~t--~~~~~~~~~~~~i~~~G~~p~~~ 363 (386)
..+ ....+.++...+|+++|++|...
T Consensus 310 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 337 (348)
T 3iix_A 310 ICVFEKDTACIPCVMKMIELLGRKPGRD 337 (348)
T ss_dssp TTTTSCTTCHHHHHHHHHHHTTCEECSS
T ss_pred cccCCCchhhHHHHHHHHHHcCCEeCCC
Confidence 111 12346788999999999999875
No 4
>2qgq_A Protein TM_1862; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; HET: CXS; 2.00A {Thermotoga maritima MSB8}
Probab=99.91 E-value=2.3e-23 Score=196.73 Aligned_cols=198 Identities=16% Similarity=0.231 Sum_probs=140.7
Q ss_pred EeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChh-hHHHHHHHHHHH
Q 016599 90 TLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKT-NFNQILEYVKDI 168 (386)
Q Consensus 90 ~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~-~~~~l~~~i~~i 168 (386)
..+++ +++||++|.||.++... + +.+.+++++|+++++.+.+.|++.+.+++.....+|.+. ..+.+.++++.+
T Consensus 6 ~~v~i-s~GC~~~C~fC~~~~~~--g--~~r~r~~e~i~~ei~~l~~~G~~ei~l~g~~~~~yG~~~~~~~~l~~Ll~~l 80 (304)
T 2qgq_A 6 AYVKI-SDGCDRGCTFCSIPSFK--G--SLRSRSIEDITREVEDLLKEGKKEIILVAQDTTSYGIDLYRKQALPDLLRRL 80 (304)
T ss_dssp EEEES-BCCC---------------C--CCCBCCHHHHHHHHHHHHHTTCCEEEEECTTGGGTTHHHHSSCCHHHHHHHH
T ss_pred EEEEE-CCCCCCcCccCCccccC--C--CceeeCHHHHHHHHHHHHHCCCcEEEEEeEcccccCCCCCcHHHHHHHHHHH
Confidence 34566 89999999999887432 2 234579999999999999999999998875333333211 124567777777
Q ss_pred hhc-CcE-EE---EecCCCCHHHHHHHHHhc--cCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHH--cCCeeeEe
Q 016599 169 RDM-GME-VC---CTLGMLEKHQAIELKKAG--LTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVRE--AGINVCSG 238 (386)
Q Consensus 169 k~~-g~~-i~---~t~g~l~~e~l~~Lk~aG--~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~--~Gi~v~~~ 238 (386)
++. ++. +. +++..++++.++.|+++| ++++.+++|+. +++++.+++++++++++++++.+++ .|+.+.++
T Consensus 81 ~~~~gi~~ir~~~~~p~~l~~e~l~~l~~~g~~~~~l~i~lqs~s~~vl~~m~r~~t~e~~~~~i~~l~~~~~gi~i~~~ 160 (304)
T 2qgq_A 81 NSLNGEFWIRVMYLHPDHLTEEIISAMLELDKVVKYFDVPVQHGSDKILKLMGRTKSSEELKKMLSSIRERFPDAVLRTS 160 (304)
T ss_dssp HTSSSSCEEEECCCCGGGCCHHHHHHHHHCTTBCCEEECCCBCSCHHHHHHTTCCSCHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HhcCCCcEEEEeeeecccCCHHHHHHHHhCCCCccEEEEecccCCHHHHHHhCCCCCHHHHHHHHHHHHhhCCCCEEEEE
Confidence 654 553 32 234568999999999999 99999999999 9999999999999999999999999 69999999
Q ss_pred EEeec-CCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCC-CCCHHHHHHH
Q 016599 239 GIIGL-GEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQK-PVEIWEMIRM 294 (386)
Q Consensus 239 ~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~-~~s~~e~~~~ 294 (386)
+|+|+ |||.+++.++++++++++ ++.+.++.|.|.|||++...+ .++.+...+.
T Consensus 161 ~IvG~PgEt~ed~~~t~~~l~~l~--~~~v~~~~~~p~pgT~~~~~~~~v~~~~~~~r 216 (304)
T 2qgq_A 161 IIVGFPGETEEDFEELKQFVEEIQ--FDKLGAFVYSDEEGTVAFNLKEKVDPEMAKRR 216 (304)
T ss_dssp EEECCTTCCHHHHHHHHHHHHHHC--CSEEEEEECCC-----------CCCHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHHHHcC--CCEEEEEEeeCCCCChhHhCcCCCCHHHHHHH
Confidence 99999 999999999999999996 889999999999999987665 4565544433
No 5
>1tv8_A MOAA, molybdenum cofactor biosynthesis protein A; TIM barrel, ligand binding protein; HET: SAM; 2.20A {Staphylococcus aureus} SCOP: c.1.28.3 PDB: 1tv7_A* 2fb3_A* 2fb2_A*
Probab=99.87 E-value=1.6e-20 Score=180.15 Aligned_cols=204 Identities=21% Similarity=0.274 Sum_probs=162.2
Q ss_pred CCCeeEEEEeeeecCCCCCcCCCCCCCCCCC---CCCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhH
Q 016599 82 NFREVQQCTLLSIKTGGCSEDCSYCPQSSRY---DTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNF 158 (386)
Q Consensus 82 ~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~---~~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~ 158 (386)
+|..+.. ..+++ |++||++|.||...... .........++.+++.+.++.+.+.|++.|.++| |||+..
T Consensus 9 ~gr~~~~-l~i~~-T~~CNl~C~yC~~~~~~~~~~~~~~~~~~ls~e~i~~~i~~~~~~g~~~i~~tG------GEPll~ 80 (340)
T 1tv8_A 9 LGRPIRD-LRLSV-TDRCNFRCDYCMPKEVFGDDFVFLPKNELLTFDEMARIAKVYAELGVKKIRITG------GEPLMR 80 (340)
T ss_dssp TSCBCCE-EEEEC-CSCCSCCCTTTSCTTTSSTTCCCCCGGGSCCHHHHHHHHHHHHHTTCCEEEEES------SCGGGS
T ss_pred CCCccCe-EEEEe-CCCcCCcCCCCCcCcccCCCcccCCccCCCCHHHHHHHHHHHHHCCCCEEEEeC------CCccch
Confidence 3555543 23566 99999999999875411 0111233459999999999999999999998876 467666
Q ss_pred HHHHHHHHHHhhcCc--EE-EEecCCCCHHHHHHHHHhccCeeecccCch-HHHHhhhCCCC-CHHHHHHHHHHHHHcCC
Q 016599 159 NQILEYVKDIRDMGM--EV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTR-SYDERLETLKHVREAGI 233 (386)
Q Consensus 159 ~~l~~~i~~ik~~g~--~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~-s~~~~l~~i~~a~~~Gi 233 (386)
+++.++++.+++.+. .+ .+|||.+..+.++.|+++|++.|.+++|+. ++.|+.+++.+ ++++++++|+.++++|+
T Consensus 81 ~~l~~li~~~~~~~~~~~i~i~TNG~ll~~~~~~L~~~g~~~v~iSld~~~~~~~~~i~~~~~~~~~v~~~i~~l~~~g~ 160 (340)
T 1tv8_A 81 RDLDVLIAKLNQIDGIEDIGLTTNGLLLKKHGQKLYDAGLRRINVSLDAIDDTLFQSINNRNIKATTILEQIDYATSIGL 160 (340)
T ss_dssp TTHHHHHHHHTTCTTCCEEEEEECSTTHHHHHHHHHHHTCCEEEEECCCSSHHHHHHHHSSCCCHHHHHHHHHHHHHTTC
T ss_pred hhHHHHHHHHHhCCCCCeEEEEeCccchHHHHHHHHHCCCCEEEEecCCCCHHHHHHhhCCCCCHHHHHHHHHHHHHCCC
Confidence 778899999887643 43 568898777899999999999999999999 89999998877 99999999999999999
Q ss_pred eeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCC-CCCCCCCHHHHHHHHH
Q 016599 234 NVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL-QDQKPVEIWEMIRMIA 296 (386)
Q Consensus 234 ~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l-~~~~~~s~~e~~~~~a 296 (386)
.+.+++++..++|.+++.++++++++++ ++ +.+..|+|.++++. .....++.+++++.+.
T Consensus 161 ~v~i~~vv~~g~n~~ei~~~~~~~~~~g--~~-~~~i~~~p~~~~~~~~~~~~~~~~e~~~~l~ 221 (340)
T 1tv8_A 161 NVKVNVVIQKGINDDQIIPMLEYFKDKH--IE-IRFIEFMDVGNDNGWDFSKVVTKDEMLTMIE 221 (340)
T ss_dssp EEEEEEEECTTTTGGGHHHHHHHHHHTT--CC-EEEEECCCBCSSSSBCCSSCCCHHHHHHHHH
T ss_pred CEEEEEEEeCCCCHHHHHHHHHHHHhcC--Ce-EEEEEeeEcCCCccchhhcCCCHHHHHHHHH
Confidence 9888888855889999999999999997 54 77888999987753 2234567777766654
No 6
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=99.86 E-value=3e-21 Score=192.17 Aligned_cols=203 Identities=15% Similarity=0.157 Sum_probs=155.4
Q ss_pred eeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHc----CCcEEEEecccCCCCCChhhHHHHHHHHH
Q 016599 91 LLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEA----GSTRFCMGAAWRDTIGRKTNFNQILEYVK 166 (386)
Q Consensus 91 ~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~~----G~~~v~l~~g~~~~~ge~~~~~~l~~~i~ 166 (386)
.+++ ++|+.+|.||.+....... ........+.+.++++.+.+. ++..++++|| +++.. ..+.+.++++
T Consensus 56 YihI--pfC~~~C~yC~~~~~~~~~-~~~~~~~~~~l~~Ei~~~~~~~~~~~i~~i~fgGG-tpt~l---~~~~l~~ll~ 128 (457)
T 1olt_A 56 YVHI--PFCHKLCYFCGCNKIVTRQ-QHKADQYLDALEQEIVHRAPLFAGRHVSQLHWGGG-TPTYL---NKAQISRLMK 128 (457)
T ss_dssp EEEE--CEESSCCTTCCSSCEECSC-THHHHHHHHHHHHHHHHHGGGGTTCCEEEEEEEES-CGGGS---CHHHHHHHHH
T ss_pred EEEc--CCCCCCCCCCCCceeccCC-cchHHHHHHHHHHHHHHHHHhcCCCceEEEEEeCC-CcccC---CHHHHHHHHH
Confidence 3455 4799999999987532111 111112467777777766543 3566777664 44332 2355666666
Q ss_pred HHhhc-------CcEEEEecCCCCHHHHHHHHHhccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCe-eeE
Q 016599 167 DIRDM-------GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGIN-VCS 237 (386)
Q Consensus 167 ~ik~~-------g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~-v~~ 237 (386)
.+++. .+.+.++++.++++.++.|+++|++++++++|++ +++++.+++.+++++++++++.++++|+. +++
T Consensus 129 ~i~~~~~~~~~~eitie~~p~~l~~e~l~~L~~~G~~rislGvQS~~~~~l~~i~R~~~~~~~~~ai~~~r~~G~~~v~~ 208 (457)
T 1olt_A 129 LLRENFQFNADAEISIEVDPREIELDVLDHLRAEGFNRLSMGVQDFNKEVQRLVNREQDEEFIFALLNHAREIGFTSTNI 208 (457)
T ss_dssp HHHHHSCEEEEEEEEEEECSSSCCTHHHHHHHHTTCCEEEEEEECCCHHHHHHHTCCCCHHHHHHHHHHHHHTTCCSCEE
T ss_pred HHHHhCCCCCCcEEEEEEccCcCCHHHHHHHHHcCCCEEEEeeccCCHHHHHHhCCCCCHHHHHHHHHHHHHcCCCcEEE
Confidence 66541 2335566778999999999999999999999999 99999999999999999999999999998 999
Q ss_pred eEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCC-----CCCCCHHHHHHHHHHHHHhC
Q 016599 238 GGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQD-----QKPVEIWEMIRMIATARIVM 302 (386)
Q Consensus 238 ~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~-----~~~~s~~e~~~~~a~~R~~l 302 (386)
++|+|+ |||.+++.++++++.+++ ++++.++.|.|.|+|+... ...++.++..+++..+...+
T Consensus 209 dlI~GlPget~e~~~~tl~~~~~l~--~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L 277 (457)
T 1olt_A 209 DLIYGLPKQTPESFAFTLKRVAELN--PDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFL 277 (457)
T ss_dssp EEEESCTTCCHHHHHHHHHHHHHHC--CSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHH
T ss_pred EEEcCCCCCCHHHHHHHHHHHHhcC--cCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHH
Confidence 999999 999999999999999996 8999999999999987542 23467788777777665544
No 7
>2yx0_A Radical SAM enzyme; predicted tRNA modification enzyme, metal binding protein, structural genomics, NPPSFA; 2.21A {Pyrococcus horikoshii}
Probab=99.81 E-value=5.5e-19 Score=169.49 Aligned_cols=201 Identities=15% Similarity=0.177 Sum_probs=154.3
Q ss_pred C-CCCCcCCCCCCCCCCCCCC-CcccCCCCHHHHHHHHHHHHHc------C--------------CcEEEEecccCCCCC
Q 016599 96 T-GGCSEDCSYCPQSSRYDTG-VKGQKLMTKDAVMQAAQKAKEA------G--------------STRFCMGAAWRDTIG 153 (386)
Q Consensus 96 t-~~C~~~C~fC~~~~~~~~~-~~~~~~~s~eeI~~~~~~~~~~------G--------------~~~v~l~~g~~~~~g 153 (386)
+ ++||++|.||........+ ....+.+++++|++.+..+... | ++.|.+.+| |
T Consensus 77 ~~~gCnl~C~fC~~~~~~~~~~~~~~~~~~~eei~~~i~~~~~~~~~~~~g~~~v~~~~~~e~~~~~~v~~sgg-----G 151 (342)
T 2yx0_A 77 VLAWCTHNCIFCWRPMENFLGTELPQPWDDPAFIVEESIKAQRKLLIGYKGNPKVDKKKFEEAWNPTHAAISLS-----G 151 (342)
T ss_dssp CSSCCSBCCTTCCCSSSSCSCSSCCSSCCCHHHHHHHHHHHHHHHHTTCC--CCSCHHHHHHHTSCCEEEECSS-----S
T ss_pred ChhhhhCcCcccCCCCCCCcccccccCcCCHHHHHHHHHHHHHHHhhccCCCcccchhhhhhccCCCEEEEcCC-----C
Confidence 5 6999999999876321110 1133458999999877665321 2 456777644 4
Q ss_pred ChhhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhc--cCeeecccCch-HHHHhhhCC---CCCHHHHHHHHH
Q 016599 154 RKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAG--LTAYNHNLDTS-REFYSKIIT---TRSYDERLETLK 226 (386)
Q Consensus 154 e~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG--~~~v~i~le~~-~~~~~~i~~---~~s~~~~l~~i~ 226 (386)
||+..+++.++++.+++.|+.+ ..|||.+ ++.++.|+++| ++.+.+++|+. ++.|+.+++ +.++++++++++
T Consensus 152 EPll~~~l~~ll~~~~~~g~~i~l~TNG~~-~e~l~~L~~~g~~~~~l~isld~~~~e~~~~i~~~~~~~~~~~~~~~i~ 230 (342)
T 2yx0_A 152 EPMLYPYMGDLVEEFHKRGFTTFIVTNGTI-PERLEEMIKEDKLPTQLYVSITAPDIETYNSVNIPMIPDGWERILRFLE 230 (342)
T ss_dssp CGGGSTTHHHHHHHHHHTTCEEEEEECSCC-HHHHHHHHHTTCCCSEEEEEECCSSHHHHHHHHCBSSSCHHHHHHHHHH
T ss_pred cccchhhHHHHHHHHHHCCCcEEEEcCCCc-HHHHHHHHhcCCCCCEEEEEccCCCHHHHHHHhCCCcccHHHHHHHHHH
Confidence 5655567888888888888875 4578887 88999999988 99999999999 899999986 457999999999
Q ss_pred HHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCC--CCCCCCCCCCHHHHHHHHHHHHHhCCC
Q 016599 227 HVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKG--TPLQDQKPVEIWEMIRMIATARIVMPK 304 (386)
Q Consensus 227 ~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~g--T~l~~~~~~s~~e~~~~~a~~R~~lp~ 304 (386)
.+++.|+.+.+.+++..|+|.+++.++++++++++ ++.+.+.+|.|.+. +++.....++.+++.++...++..+|.
T Consensus 231 ~l~~~g~~v~i~~~l~~g~n~~~~~~l~~~l~~~~--~~~i~l~~~~~~~~~~~~l~~~~~~~~e~~~~~~~~l~~~l~~ 308 (342)
T 2yx0_A 231 LMRDLPTRTVVRLTLVKGENMHSPEKYAKLILKAR--PMFVEAKAYMFVGYSRNRLTINNMPSHQDIREFAEALVKHLPG 308 (342)
T ss_dssp HHTTCSSEEEEEEEECTTTTCCCHHHHHHHHHHHC--CSEEEEEECC------CCCCGGGSCCHHHHHHHHHHHHTTCTT
T ss_pred HHHhCCCCEEEEEEEECCccHHHHHHHHHHHHHcC--CCEEEEEeeeecCCCcccccccCCCCHHHHHHHHHHHHHhccC
Confidence 99999999998888866888888999999999986 88999888888764 344444577889999988888887765
No 8
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=99.80 E-value=1.9e-18 Score=157.24 Aligned_cols=194 Identities=16% Similarity=0.223 Sum_probs=148.8
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHc---CCcEEEEecccCCCCCChhhHHH-HHHHHHHHhhc
Q 016599 96 TGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEA---GSTRFCMGAAWRDTIGRKTNFNQ-ILEYVKDIRDM 171 (386)
Q Consensus 96 t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~~---G~~~v~l~~g~~~~~ge~~~~~~-l~~~i~~ik~~ 171 (386)
|++||++|.||........ ...+.++++++.+.++.+.+. +...|.++| |||....+ +.++++.+++.
T Consensus 26 t~~Cn~~C~~C~~~~~~~~--~~~~~~~~~~i~~~i~~~~~~~~~~~~~i~~~G------GEP~l~~~~l~~l~~~~~~~ 97 (245)
T 3c8f_A 26 FQGCLMRCLYCHNRDTWDT--HGGKEVTVEDLMKEVVTYRHFMNASGGGVTASG------GEAILQAEFVRDWFRACKKE 97 (245)
T ss_dssp ESCCSCCCTTCSCGGGCCT--TCSEEECHHHHHHHHGGGHHHHTSTTCEEEEEE------SCGGGGHHHHHHHHHHHHTT
T ss_pred eCCCCCCCCCCCCchhccc--ccCccCCHHHHHHHHHHhhhhhcCCCCeEEEEC------CCcCCCHHHHHHHHHHHHHc
Confidence 7899999999987642211 123347999999998876653 357788877 35655555 68999999887
Q ss_pred CcEE-EEecCCC--CHHHHHHHHHhccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEe--ecCC
Q 016599 172 GMEV-CCTLGML--EKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGII--GLGE 245 (386)
Q Consensus 172 g~~i-~~t~g~l--~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~--Glge 245 (386)
|+.+ ..|||.+ +.+.++.|.++ ++.+.+++|+. ++.++.+++. ++++++++++.++++|+.+.+.+++ |.++
T Consensus 98 ~~~i~i~Tng~~~~~~~~~~~l~~~-~~~v~isld~~~~~~~~~~~~~-~~~~~~~~i~~l~~~g~~v~i~~~~~~g~~~ 175 (245)
T 3c8f_A 98 GIHTCLDTNGFVRRYDPVIDELLEV-TDLVMLDLKQMNDEIHQNLVGV-SNHRTLEFAKYLANKNVKVWIRYVVVPGWSD 175 (245)
T ss_dssp TCCEEEEECCCCCCCCHHHHHHHHT-CSEEEEECCCSSHHHHHHHHSS-CSHHHHHHHHHHHHHTCCEEEEEEECTTTTC
T ss_pred CCcEEEEeCCCcCcCHHHHHHHHHh-CCEEEEeCCCCCHHHhhhccCC-CHHHHHHHHHHHHhcCCEEEEEEeecCCCCC
Confidence 8775 4578987 88999999988 89999999999 8999999764 4699999999999999987766555 3457
Q ss_pred CHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCC---------CCCCCCCCCHHHHHHHHHHHHH
Q 016599 246 AEEDRVGLLHTLATLPTHPESVPINALLAVKGT---------PLQDQKPVEIWEMIRMIATARI 300 (386)
Q Consensus 246 t~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT---------~l~~~~~~s~~e~~~~~a~~R~ 300 (386)
+.+++.++++++++++. +..+.+.+|.|.+++ ++.+.++++.+++.++...++.
T Consensus 176 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (245)
T 3c8f_A 176 DDDSAHRLGEFTRDMGN-VEKIELLPYHELGKHKWVAMGEEYKLDGVKPPKKETMERVKGILEQ 238 (245)
T ss_dssp CHHHHHHHHHHHHHHCC-EEEEEEEECCCCSHHHHHHTTCCCTTTTCCCCCHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHhcCC-CceeEEEeccccChhHHHhhCcccccccCCCCCHHHHHHHHHHHHh
Confidence 88999999999999962 377888888886643 3344567788887777766653
No 9
>2z2u_A UPF0026 protein MJ0257; metal binding protein; 2.40A {Methanocaldococcus jannaschii}
Probab=99.74 E-value=6.1e-18 Score=160.06 Aligned_cols=197 Identities=16% Similarity=0.243 Sum_probs=129.7
Q ss_pred EeeeecC-CCCCcCCCCCCCCCCCCCC-----CcccCCCCHHHHHHHHHHHHH------cC---------------CcEE
Q 016599 90 TLLSIKT-GGCSEDCSYCPQSSRYDTG-----VKGQKLMTKDAVMQAAQKAKE------AG---------------STRF 142 (386)
Q Consensus 90 ~~i~i~t-~~C~~~C~fC~~~~~~~~~-----~~~~~~~s~eeI~~~~~~~~~------~G---------------~~~v 142 (386)
..+++ | .+||++|.||........+ ....+.++++++++.+..... .| .+.+
T Consensus 53 l~i~~-t~~~Cn~~C~fC~~~~~~~~~~~~~~~~~~~~~~~eei~~~~~~~~~~~~~~~~g~~~v~~~~r~~~~~~~~~i 131 (311)
T 2z2u_A 53 IQCTP-SVIWCQQNCIFCWRVLPRDIGIDISQIKEPKWEEPEVVYEKILAMHKRIIMGYAGVLDRVGEKKFKEALEPKHV 131 (311)
T ss_dssp EEEES-CSSCCSCC----------------CCSCCCCCCCHHHHHHHHHHHHHHHHHGGGGGHHHHCHHHHHHHTSCCEE
T ss_pred EEecc-ChhHHhCcCcccCCCCCCcccccccccCccccCCHHHHHHHHHHHHHHHhhccCCCcCcchhhhhhhccCCCEE
Confidence 44566 7 7999999999865311111 112345899999987654422 12 3457
Q ss_pred EEecccCCCCCChhhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeecccCch-HHHHhhhCCC--CCH
Q 016599 143 CMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITT--RSY 218 (386)
Q Consensus 143 ~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~--~s~ 218 (386)
.+.+| |||+.++++.++++.+++.|+.+ ..|||.+ ++.++.| |++.+.+++|+. ++.|+.+++. .++
T Consensus 132 ~~s~g-----GEPll~~~l~~li~~~~~~g~~~~l~TNG~~-~~~l~~L---~~~~v~isld~~~~~~~~~i~~~~~~~~ 202 (311)
T 2z2u_A 132 AISLS-----GEPTLYPYLDELIKIFHKNGFTTFVVSNGIL-TDVIEKI---EPTQLYISLDAYDLDSYRRICGGKKEYW 202 (311)
T ss_dssp EECSS-----SCGGGSTTHHHHHHHHHHTTCEEEEEECSCC-HHHHHHC---CCSEEEEECCCSSTTTC----CCCHHHH
T ss_pred EEeCC-----cCccchhhHHHHHHHHHHCCCcEEEECCCCC-HHHHHhC---CCCEEEEEeecCCHHHHHHHhCCccchH
Confidence 77643 46766677899999998888875 5678887 5655555 899999999999 8999999876 589
Q ss_pred HHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCC--CCCCCCCHHHHHHHHH
Q 016599 219 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL--QDQKPVEIWEMIRMIA 296 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l--~~~~~~s~~e~~~~~a 296 (386)
++++++++.+++.| .+.+.+++..|.+. ++.++++++++++ ++.+.+.+|+|.++++. .....++.+++.+...
T Consensus 203 ~~v~~~i~~l~~~g-~v~i~~~~~~g~n~-~~~~~~~~~~~~~--~~~i~l~~~~p~g~~~~~~~~~~~~~~~e~~~~~~ 278 (311)
T 2z2u_A 203 ESILNTLDILKEKK-RTCIRTTLIRGYND-DILKFVELYERAD--VHFIELKSYMHVGYSQKRLKKEDMLQHDEILKLAK 278 (311)
T ss_dssp HHHHHHHHHHTTSS-SEEEEEEECTTTTC-CGGGTHHHHHHHT--CSEEEEEECC------------CCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcC-CEEEEEEEECCcch-hHHHHHHHHHHcC--CCEEEEEeeEEccccccccccccCCCHHHHHHHHH
Confidence 99999999999999 77777666556666 8899999999986 88999999999987763 2345678888888777
Q ss_pred HHHH
Q 016599 297 TARI 300 (386)
Q Consensus 297 ~~R~ 300 (386)
.++.
T Consensus 279 ~l~~ 282 (311)
T 2z2u_A 279 MLDE 282 (311)
T ss_dssp HHHT
T ss_pred HHHH
Confidence 6654
No 10
>3rfa_A Ribosomal RNA large subunit methyltransferase N; radical SAM, S-adenosylmethionine, iron sulfur cluster, oxidoreductase; HET: SAM; 2.05A {Escherichia coli} PDB: 3rf9_A*
Probab=99.67 E-value=3.3e-15 Score=144.67 Aligned_cols=189 Identities=16% Similarity=0.220 Sum_probs=142.3
Q ss_pred CCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHH----------cCCcEEEEecccCCCCCChh-hHHHHHHH
Q 016599 96 TGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKE----------AGSTRFCMGAAWRDTIGRKT-NFNQILEY 164 (386)
Q Consensus 96 t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~----------~G~~~v~l~~g~~~~~ge~~-~~~~l~~~ 164 (386)
+.+||++|.||..... + ..+.++++||++.+..+.. .+++.|+|.|+ |||+ .++.+.++
T Consensus 122 q~GCnl~C~fC~tg~~---g--~~r~Lt~eEIv~qv~~~~~~~~~~g~~gg~~i~~Ivf~Gg-----GEPLln~d~v~~~ 191 (404)
T 3rfa_A 122 QVGCALECKFCSTAQQ---G--FNRNLRVSEIIGQVWRAAKIVGAAKVTGQRPITNVVMMGM-----GEPLLNLNNVVPA 191 (404)
T ss_dssp EEECSSCCTTCGGGTT---C--EEEECCHHHHHHHHHHHHHHHCCHHHHSSCSCSEEEECSS-----SCGGGCHHHHHHH
T ss_pred CCCCCCcCCCCCCCCC---C--CCCcCCHHHHHHHHHHHHHHhhhcccccCCCccEEEEeCC-----CCcccCHHHHHHH
Confidence 5689999999986532 2 1345899999998876653 24677888864 4664 45889999
Q ss_pred HHHHhh-cCc-----EE-EEecCCCCHHHHHHHHHhccCeeecccCch-HHHHhhhCC---CCCHHHHHHHHHH-HHHcC
Q 016599 165 VKDIRD-MGM-----EV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIIT---TRSYDERLETLKH-VREAG 232 (386)
Q Consensus 165 i~~ik~-~g~-----~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~---~~s~~~~l~~i~~-a~~~G 232 (386)
++.+++ .|+ .+ ..|+|.+ +.+++|.+.+...+.+++++. ++.|+++.+ ..++++++++++. +.+.|
T Consensus 192 i~~lk~~~Gl~~s~r~itlsTnG~~--p~i~~L~~~~d~~LaiSLka~d~e~~~~i~pv~~~~~le~vl~ai~~~~~~~g 269 (404)
T 3rfa_A 192 MEIMLDDFGFGLSKRRVTLSTSGVV--PALDKLGDMIDVALAISLHAPNDEIRDEIVPINKKYNIETFLAAVRRYLEKSN 269 (404)
T ss_dssp HHHHHSTTTTCCCGGGEEEEESCCH--HHHHHHHHHCCCEEEEECCCSSHHHHHHHSGGGGTSCHHHHHHHHHHHHHHCT
T ss_pred HHHHHhhcCcCcCCCceEEECCCcH--HHHHHHHHhhcceEEecccCCCHHHHHHhcCCccCCCHHHHHHHHHHHHHHhC
Confidence 999986 476 44 4578976 457888888655678999999 899999885 4589999999954 56667
Q ss_pred C---eeeE--eEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhC
Q 016599 233 I---NVCS--GGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVM 302 (386)
Q Consensus 233 i---~v~~--~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~l 302 (386)
. .+.+ .+|-|++++.+++.+++++++.++ ..+.+.+|+|+++.. .++++.+++.+...+++..-
T Consensus 270 ~~~~~V~ie~vLI~GvNDs~e~~~~La~ll~~l~---~~VnLIpynP~~~~~---~~~ps~e~i~~f~~iL~~~G 338 (404)
T 3rfa_A 270 ANQGRVTIEYVMLDHVNDGTEHAHQLAELLKDTP---CKINLIPWNPFPGAP---YGRSSNSRIDRFSKVLMSYG 338 (404)
T ss_dssp TTTTCEEEEEEEBTTTTCSHHHHHHHHHHTTTSC---EEEEEEECCCCTTCC---CCBCCHHHHHHHHHHHHHTT
T ss_pred CCcccEEEEEEEecCCCCCHHHHHHHHHHHHcCC---CcEEEEeccCCCCCC---CCCCCHHHHHHHHHHHHHcC
Confidence 6 5554 455577899999999999999884 368888999987665 35678888777777666543
No 11
>2a5h_A L-lysine 2,3-aminomutase; radical SAM, four-iron-four-sulfur cluster, 4Fe4S, FS4, SAM, adenosylmethionine, alpha-beta channel; HET: SAM LYS PLP; 2.10A {Clostridium subterminale}
Probab=99.54 E-value=7.3e-14 Score=136.96 Aligned_cols=187 Identities=16% Similarity=0.178 Sum_probs=131.3
Q ss_pred EeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHH-cCCcEEEEecccCCCCCChhhHH--HHHHHHH
Q 016599 90 TLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFN--QILEYVK 166 (386)
Q Consensus 90 ~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~-~G~~~v~l~~g~~~~~ge~~~~~--~l~~~i~ 166 (386)
..+++ |++||.+|.||...... + .....++.+++.+.++.+.+ .|+..|.++|| +|+... .+.++++
T Consensus 117 v~l~v-T~~Cnl~C~yC~~~~~~--~-~~~~~ls~eei~~~i~~i~~~~gi~~V~ltGG------EPll~~d~~L~~il~ 186 (416)
T 2a5h_A 117 VLLLI-TDMCSMYCRHCTRRRFA--G-QSDDSMPMERIDKAIDYIRNTPQVRDVLLSGG------DALLVSDETLEYIIA 186 (416)
T ss_dssp EEEEE-ESCCSSCCTTCTTTTTT--T-SSSSBCCHHHHHHHHHHHHTCTTCCEEEEEES------CTTSSCHHHHHHHHH
T ss_pred EEEec-CCCccccCcCCCCcccC--C-CccCCCCHHHHHHHHHHHHhcCCCcEEEEECC------CCCCCCHHHHHHHHH
Confidence 34666 99999999999765322 1 12235899999999998887 68989988874 343333 3777777
Q ss_pred HHhhc-CcE-E-EEecC------CCCHHHHHHHHHhccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 016599 167 DIRDM-GME-V-CCTLG------MLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVC 236 (386)
Q Consensus 167 ~ik~~-g~~-i-~~t~g------~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~ 236 (386)
.+++. ++. + ..|+| .++++.++.|+++ +.+.+++++. + +.+. ++++++++.++++|+.+.
T Consensus 187 ~l~~~~~v~~i~i~Tng~~~~p~~it~e~l~~L~~~--~~v~Isl~~~~~---~ei~-----~~v~~ai~~L~~aGi~v~ 256 (416)
T 2a5h_A 187 KLREIPHVEIVRIGSRTPVVLPQRITPELVNMLKKY--HPVWLNTHFNHP---NEIT-----EESTRACQLLADAGVPLG 256 (416)
T ss_dssp HHHTSTTCCEEEEECSHHHHCGGGCCHHHHHHHGGG--CSEEEEECCCSG---GGCC-----HHHHHHHHHHHHTTCCEE
T ss_pred HHHhcCCccEEEEEecccccccccCCHHHHHHHHhc--CcEEEEEecCCH---HHHh-----HHHHHHHHHHHHcCCEEE
Confidence 77765 442 3 35566 4679999999988 7788888876 4 2332 899999999999999876
Q ss_pred EeEEe--ecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 016599 237 SGGII--GLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIV 301 (386)
Q Consensus 237 ~~~i~--Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~ 301 (386)
...++ |++++.+++.++++++.+++ +....++.+.+.+|+++.. .+..+..+++..++..
T Consensus 257 i~~vll~GvNd~~e~l~~l~~~l~~lg--v~~~~i~~~~~~~g~~~~~---~~~~~~~eil~~l~~~ 318 (416)
T 2a5h_A 257 NQSVLLRGVNDCVHVMKELVNKLVKIR--VRPYYIYQCDLSLGLEHFR---TPVSKGIEIIEGLRGH 318 (416)
T ss_dssp EEEECCTTTTCSHHHHHHHHHHHHHTT--EEEEEEECCCCBTTCGGGC---CCHHHHHHHHHTTBTT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHHHcC--CceEEEeecCCCCCccccc---CCcccHHHHHHHHHHH
Confidence 66555 67888889999999999996 4444444333356776432 3455555555555443
No 12
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.33 E-value=3.3e-11 Score=104.56 Aligned_cols=151 Identities=13% Similarity=0.056 Sum_probs=115.0
Q ss_pred EEEEecccCCCCCChhhHHHH-HHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeecccCch-HHHHhhhCCCCC
Q 016599 141 RFCMGAAWRDTIGRKTNFNQI-LEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRS 217 (386)
Q Consensus 141 ~v~l~~g~~~~~ge~~~~~~l-~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~s 217 (386)
.|.++| |||+...++ .++++.+++.|+.+ ..|||.++++.++.|.++ ++.+.+++++. ++.|+++++ .+
T Consensus 6 ~v~~tG------GEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g-~~ 77 (182)
T 3can_A 6 GVTFCG------GEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRN-CELLLIDLKSMDSTVHQTFCD-VP 77 (182)
T ss_dssp CEEECS------STGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHS-SC
T ss_pred EEEEEc------ccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhC-CC
Confidence 455655 578777666 59999999888875 567999999999999988 89999999999 899999875 45
Q ss_pred HHHHHHHHHHHHHcCCeeeEeEEe--ecCCCHHHHHHHHHHHhcC-CCCC-CeEeeeeeeecCCCC---------CCCCC
Q 016599 218 YDERLETLKHVREAGINVCSGGII--GLGEAEEDRVGLLHTLATL-PTHP-ESVPINALLAVKGTP---------LQDQK 284 (386)
Q Consensus 218 ~~~~l~~i~~a~~~Gi~v~~~~i~--Glget~ed~~~~l~~l~~l-~~~~-~~v~~~~f~P~~gT~---------l~~~~ 284 (386)
++.++++++.+.+.|+.+.+.+++ |++++.+++.++++++.++ + + ..+.+.+|.|.+... +.+.+
T Consensus 78 ~~~i~~~i~~l~~~g~~v~i~~~v~~~~n~n~~~~~~~~~~~~~~~g--~~~~~~l~~~~p~g~~~~~~l~~~y~~~~~~ 155 (182)
T 3can_A 78 NELILKNIRRVAEADFPYYIRIPLIEGVNADEKNIKLSAEFLASLPR--HPEIINLLPYHDIGKGKHAKLGSIYNPKGYK 155 (182)
T ss_dssp SHHHHHHHHHHHHTTCCEEEEEEECBTTTCSHHHHHHHHHHHHHSSS--CCSEEEEEECCC------------------C
T ss_pred HHHHHHHHHHHHhCCCeEEEEEEEECCCCCCHHHHHHHHHHHHhCcC--ccceEEEecCcccCHHHHHHhCCcCcccCCC
Confidence 799999999999999886665544 4468899999999999998 6 6 789999999977443 33345
Q ss_pred CCCHHH--HHHHHHHHHHh
Q 016599 285 PVEIWE--MIRMIATARIV 301 (386)
Q Consensus 285 ~~s~~e--~~~~~a~~R~~ 301 (386)
+++.++ +.+....++..
T Consensus 156 ~~~~e~~~l~~~~~~~~~~ 174 (182)
T 3can_A 156 MQTPSEEVQQQCIQILTDY 174 (182)
T ss_dssp CBCCCHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHHHc
Confidence 566666 77777777654
No 13
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=98.52 E-value=9.7e-06 Score=75.58 Aligned_cols=222 Identities=13% Similarity=0.057 Sum_probs=148.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
++.++.++.++.+.+.|++.+-++++..+ ...|.. .+..+.++.+++. +..+..-. .+.+.++...++|++.+.+
T Consensus 24 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~-~~~p~~-~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~ag~~~v~i 99 (298)
T 2cw6_A 24 VSTPVKIKLIDMLSEAGLSVIETTSFVSP-KWVPQM-GDHTEVLKGIQKFPGINYPVLT--PNLKGFEAAVAAGAKEVVI 99 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEECCEECCCT-TTCGGG-TTHHHHHHHSCCCTTCBCCEEC--CSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCcCEEEECCCcCc-cccccc-CCHHHHHHHHhhCCCCEEEEEc--CCHHhHHHHHHCCCCEEEE
Confidence 89999999999999999998877653222 111311 2334555555543 44432211 3578899999999999998
Q ss_pred ccCchH-HHHhhhCCCC--CHHHHHHHHHHHHHcCCeeeEeEEeec------CCCHHHHHHHHHHHhcCCCCCCeEeeee
Q 016599 201 NLDTSR-EFYSKIITTR--SYDERLETLKHVREAGINVCSGGIIGL------GEAEEDRVGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 201 ~le~~~-~~~~~i~~~~--s~~~~l~~i~~a~~~Gi~v~~~~i~Gl------get~ed~~~~l~~l~~l~~~~~~v~~~~ 271 (386)
...+.+ ....+++.+. .++...+.++.+++.|+.+..++++.+ ..+.+.+.+.++.+.++| ++.+.+.
T Consensus 100 ~~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l~- 176 (298)
T 2cw6_A 100 FGAASELFTKKNINCSIEESFQRFDAILKAAQSANISVRGYVSCALGCPYEGKISPAKVAEVTKKFYSMG--CYEISLG- 176 (298)
T ss_dssp EEESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEEEEEETTTCBTTTBSCCHHHHHHHHHHHHHTT--CSEEEEE-
T ss_pred EecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC--CCEEEec-
Confidence 765553 3445555432 567788889999999999888877543 137899999999999997 6665543
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccC--hhHHHhhhhcCcccc---ccC--C-ccc--cC
Q 016599 272 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS--MPEQALCFLAGANSI---FTG--E-KLL--TT 341 (386)
Q Consensus 272 f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~--~~~~~~~l~~Gan~~---~~g--~-~~~--t~ 341 (386)
+|- ...++.++.+++...+..+|+..+.+.+ ...++ -.....++.+||+.+ +.| + .|. .+
T Consensus 177 -----DT~----G~~~P~~~~~lv~~l~~~~~~~~i~~H~-Hn~~Gla~An~laA~~aGa~~vd~tv~GlG~cp~a~g~a 246 (298)
T 2cw6_A 177 -----DTI----GVGTPGIMKDMLSAVMQEVPLAALAVHC-HDTYGQALANTLMALQMGVSVVDSSVAGLGGCPYAQGAS 246 (298)
T ss_dssp -----ETT----SCCCHHHHHHHHHHHHHHSCGGGEEEEE-BCTTSCHHHHHHHHHHTTCCEEEEBTTSCCCCTTSCSSC
T ss_pred -----CCC----CCcCHHHHHHHHHHHHHhCCCCeEEEEE-CCCCchHHHHHHHHHHhCCCEEEeecccccCCCCCCCCc
Confidence 231 2357888899998888878754343321 11222 122467889999977 222 2 111 35
Q ss_pred CCCChhHHHHHHHHcCCCc
Q 016599 342 PNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 342 ~~~~~~~~~~~i~~~G~~p 360 (386)
++...++++.+++..|+.+
T Consensus 247 GN~~~E~lv~~l~~~g~~~ 265 (298)
T 2cw6_A 247 GNLATEDLVYMLEGLGIHT 265 (298)
T ss_dssp CBCBHHHHHHHHHHHTCBC
T ss_pred CChhHHHHHHHHHhcCCCC
Confidence 6688999999999988753
No 14
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=98.37 E-value=4.6e-05 Score=70.89 Aligned_cols=222 Identities=12% Similarity=0.077 Sum_probs=144.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.++.++.++.++.+.+.|++.+.+++...+..- | .+....+.++.+++. +.++..-. .+.+.+++..++|++.|.
T Consensus 22 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~-p-~~~~~~e~~~~i~~~~~~~v~~l~--~n~~~i~~a~~~G~~~V~ 97 (295)
T 1ydn_A 22 FVPTADKIALINRLSDCGYARIEATSFVSPKWV-P-QLADSREVMAGIRRADGVRYSVLV--PNMKGYEAAAAAHADEIA 97 (295)
T ss_dssp CCCHHHHHHHHHHHTTTTCSEEEEEECSCTTTC-G-GGTTHHHHHHHSCCCSSSEEEEEC--SSHHHHHHHHHTTCSEEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEccCcCcccc-c-cccCHHHHHHHHHhCCCCEEEEEe--CCHHHHHHHHHCCCCEEE
Confidence 389999999999999999998877542211100 2 122456777777654 66653332 468889999999999998
Q ss_pred cccCchHHHHhh--hCCC--CCHHHHHHHHHHHHHcCCeeeEeEE--eec----CCCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 200 HNLDTSREFYSK--IITT--RSYDERLETLKHVREAGINVCSGGI--IGL----GEAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 200 i~le~~~~~~~~--i~~~--~s~~~~l~~i~~a~~~Gi~v~~~~i--~Gl----get~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
+.+.+.+ .+.+ ++.+ .+++...++++.+++.|+.+...+. +|. ..+.+++.+.++.+.+.| ++.+.+
T Consensus 98 i~~~~S~-~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G--~d~i~l 174 (295)
T 1ydn_A 98 VFISASE-GFSKANINCTIAESIERLSPVIGAAINDGLAIRGYVSCVVECPYDGPVTPQAVASVTEQLFSLG--CHEVSL 174 (295)
T ss_dssp EEEESCH-HHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECSSEETTTEECCHHHHHHHHHHHHHHT--CSEEEE
T ss_pred EEEecCH-HHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC--CCEEEe
Confidence 8664542 2332 3322 1455666778999999999875554 432 247899999999999997 776666
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcce--eecCcccccChhHHHhhhhcCcccc---ccC---Cccc--
Q 016599 270 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMV--RLSAGRVRFSMPEQALCFLAGANSI---FTG---EKLL-- 339 (386)
Q Consensus 270 ~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i--~i~~g~~~~~~~~~~~~l~~Gan~~---~~g---~~~~-- 339 (386)
.- .-| ..++.+..+++...+...|...+ +.-.. .++.......++.+||+.+ +.| -.|.
T Consensus 175 ~D---t~G-------~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~-~Gla~an~l~Ai~aG~~~vd~sv~GlG~cp~a~g 243 (295)
T 1ydn_A 175 GD---TIG-------RGTPDTVAAMLDAVLAIAPAHSLAGHYHDT-GGRALDNIRVSLEKGLRVFDASVGGLGGCPFAPG 243 (295)
T ss_dssp EE---TTS-------CCCHHHHHHHHHHHHTTSCGGGEEEEEBCT-TSCHHHHHHHHHHHTCCEEEEBTTCCSCBTTBTT
T ss_pred cC---CCC-------CcCHHHHHHHHHHHHHhCCCCeEEEEECCC-cchHHHHHHHHHHhCCCEEEeccccCCCCCCCCC
Confidence 51 112 24688888888888877764223 22111 1222233467888999987 222 1122
Q ss_pred cCCCCChhHHHHHHHHcCCCc
Q 016599 340 TTPNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 340 t~~~~~~~~~~~~i~~~G~~p 360 (386)
.+++...++++.+++..|+.+
T Consensus 244 ~~GN~~~e~lv~~l~~~g~~~ 264 (295)
T 1ydn_A 244 AKGNVDTVAVVEMLHEMGFET 264 (295)
T ss_dssp SCCBCBHHHHHHHHHHTTCBC
T ss_pred CcCChhHHHHHHHHHhcCCCC
Confidence 356678999999999988754
No 15
>4fhd_A Spore photoproduct lyase; partial TIM-barrel, DNA repair, damaged DNA; HET: EEM 0TT; 2.00A {Geobacillus thermodenitrificans} PDB: 4fhc_A* 4fhg_A* 4fhe_A* 4fhf_A*
Probab=98.33 E-value=8e-07 Score=84.56 Aligned_cols=160 Identities=18% Similarity=0.225 Sum_probs=93.1
Q ss_pred eeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHH-HHHcCCc--EEEEecccCCCCCChhhHHH----HHHH
Q 016599 92 LSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQK-AKEAGST--RFCMGAAWRDTIGRKTNFNQ----ILEY 164 (386)
Q Consensus 92 i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~-~~~~G~~--~v~l~~g~~~~~ge~~~~~~----l~~~ 164 (386)
++. ..+|.+.|.||+.....+....-.-..+.+|+++.++. +.+.+.. .|.+++ .. +|...+. ..++
T Consensus 111 ln~-y~GC~~~C~YCYl~~~~~~~~~I~v~vN~~eiL~~l~~~l~~~~~~~~~i~~g~-~T----Dpyp~E~~~~ltr~~ 184 (368)
T 4fhd_A 111 IPL-ATGCMGHCHYCYLQTTLGSKPYIRVYVNLDDIFAQAQKYINERAPEITRFEAAC-TS----DIVGIDHLTHSLKKA 184 (368)
T ss_dssp CCS-EEBCSCCCTTCTHHHHTTTCCSEEEECCHHHHHHHHHHHHHHHTTSCEEEESCS-SB----CHHHHHTTTCHHHHH
T ss_pred eCC-ccCCCCCCceEeccccCCCCCeEEEecCHHHHHHHHHHHHhhcCCCceEEEEEc-CC----CcchhhHHHhHHHHH
Confidence 455 67999999999754332111100112678999988765 3333333 333332 22 2333333 3344
Q ss_pred HHHHhhc-CcEEE-EecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCC-CCHHHHHHHHHHHHHcCCeeeEeEEe
Q 016599 165 VKDIRDM-GMEVC-CTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITT-RSYDERLETLKHVREAGINVCSGGII 241 (386)
Q Consensus 165 i~~ik~~-g~~i~-~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~-~s~~~~l~~i~~a~~~Gi~v~~~~i~ 241 (386)
++.+.+. +..+. .|=+.+. +.+..+...|...|.+++.+ +++.+.+-++ .+.++++++++.+.++|+++.+.+..
T Consensus 185 le~l~~~~~~~v~i~TKs~li-d~L~~l~~~~~v~V~~Sitt-~~l~r~~EP~aps~~~RL~Ai~~l~~aGipv~v~iaP 262 (368)
T 4fhd_A 185 IEFIGATDYGRLRFVTKYEHV-DHLLDARHNGKTRFRFSINS-RYVINHFEPGTSSFDGRLAAARKVAGAGYKLGFVVAP 262 (368)
T ss_dssp HHHHHHCSSEEEEEEESCCCC-GGGTTCCCTTCEEEEEEECC-HHHHHHHCTTSCCHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred HHHHHhCCCceEEEEeCCcCH-HHHHhcCcCCceEEEEEEcC-HHHHHHcCCCCCCHHHHHHHHHHHHHCCCeEEEEEeC
Confidence 4445544 33332 2322222 23444444455566667755 6667777664 48999999999999999998887765
Q ss_pred ec-CCCH-HHHHHHHHHHhc
Q 016599 242 GL-GEAE-EDRVGLLHTLAT 259 (386)
Q Consensus 242 Gl-get~-ed~~~~l~~l~~ 259 (386)
-+ ++++ ++..++++.+.+
T Consensus 263 IiP~~~~~e~y~~lle~l~~ 282 (368)
T 4fhd_A 263 IYRHEGWERGYFELFQELAR 282 (368)
T ss_dssp ECCCTTHHHHHHHHHHHHHH
T ss_pred cCCCCCCHHHHHHHHHHHHH
Confidence 45 5555 677777776644
No 16
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=98.19 E-value=0.00036 Score=64.96 Aligned_cols=224 Identities=13% Similarity=0.043 Sum_probs=143.8
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.++.++.++.++.+.+.|++.+-.++...+. .-| .+.+..+.++.+.+ .+..+.... .+.+.+++..++|++.|.
T Consensus 26 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~~-~~~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~aG~~~v~ 101 (302)
T 2ftp_A 26 PIEVADKIRLVDDLSAAGLDYIEVGSFVSPK-WVP-QMAGSAEVFAGIRQRPGVTYAALA--PNLKGFEAALESGVKEVA 101 (302)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEEEEEECSCTT-TCG-GGTTHHHHHHHSCCCTTSEEEEEC--CSHHHHHHHHHTTCCEEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECCCcCcc-ccc-cccCHHHHHHHhhhcCCCEEEEEe--CCHHHHHHHHhCCcCEEE
Confidence 4899999999999999999988765432221 112 11233345555543 255554333 378889999999999988
Q ss_pred cccCchH-HHHhhhCCCC--CHHHHHHHHHHHHHcCCeeeEeEEeecC------CCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 200 HNLDTSR-EFYSKIITTR--SYDERLETLKHVREAGINVCSGGIIGLG------EAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 200 i~le~~~-~~~~~i~~~~--s~~~~l~~i~~a~~~Gi~v~~~~i~Glg------et~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
+..-+.+ ....+++.+. +.+...+.++.+++.|+.+...+.+-++ -+.+.+.+.++.+.+.| ++.+.+-
T Consensus 102 i~~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~~~l~~~~~~e~~~~~~~~~~~~~~~~~~~~G--~d~i~l~ 179 (302)
T 2ftp_A 102 VFAAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVRGYISCVLGCPYDGDVDPRQVAWVARELQQMG--CYEVSLG 179 (302)
T ss_dssp EEEESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHTT--CSEEEEE
T ss_pred EEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEEEEEEEEeeCCcCCCCCHHHHHHHHHHHHHcC--CCEEEEe
Confidence 7654432 2334454322 4566677788899999998776655332 36788899999898997 6665554
Q ss_pred eeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---ccC--C-ccc--cC
Q 016599 271 ALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTG--E-KLL--TT 341 (386)
Q Consensus 271 ~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g--~-~~~--t~ 341 (386)
+|- + ..++.+..+++...+..+|+..+.+.+ .-.++.......++.+||+.+ +.| + .|- .+
T Consensus 180 ------DT~-G---~~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~~vd~tv~GlG~cp~a~gr~ 249 (302)
T 2ftp_A 180 ------DTI-G---VGTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIAVFDSSVAGLGGCPYAKGAT 249 (302)
T ss_dssp ------ESS-S---CCCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCCBCGGGTTCB
T ss_pred ------CCC-C---CcCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEecccccCCCCCCCCCC
Confidence 221 1 146788888888777767653332221 011222333467889999987 332 2 111 25
Q ss_pred CCCChhHHHHHHHHcCCCc
Q 016599 342 PNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 342 ~~~~~~~~~~~i~~~G~~p 360 (386)
++.+.++++.+++..|+.+
T Consensus 250 GN~~~E~lv~~l~~~g~~~ 268 (302)
T 2ftp_A 250 GNVASEDVLYLLNGLEIHT 268 (302)
T ss_dssp CBCBHHHHHHHHHHTTCBC
T ss_pred CChhHHHHHHHHHhcCCCC
Confidence 6788999999999988754
No 17
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=98.18 E-value=0.00028 Score=65.78 Aligned_cols=224 Identities=9% Similarity=0.064 Sum_probs=144.2
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.++.++.++.++.+.+.|++.+-+++...+. .-| .+.+..+.++.+++. +..+..-. .+.+.++...++|++.+.
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~-~~p-~~~d~~~~~~~~~~~~~~~~~~l~--~~~~~i~~a~~~g~~~v~ 99 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITSFVHPK-WIP-ALRDAIDVAKGIDREKGVTYAALV--PNQRGLENALEGGINEAC 99 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEECSCTT-TCG-GGTTHHHHHHHSCCCTTCEEEEEC--CSHHHHHHHHHHTCSEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECCCcCcc-ccc-ccCCHHHHHHHhhhcCCCeEEEEe--CCHHhHHHHHhCCcCEEE
Confidence 4899999999999999999988776532221 112 112223445555432 44433222 257789999999999998
Q ss_pred cccCchH-HHHhhhCCCC--CHHHHHHHHHHHHHcCCeeeEeEEeecC------CCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 200 HNLDTSR-EFYSKIITTR--SYDERLETLKHVREAGINVCSGGIIGLG------EAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 200 i~le~~~-~~~~~i~~~~--s~~~~l~~i~~a~~~Gi~v~~~~i~Glg------et~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
+.+-+.+ -...+++.+. .++...+.++.+++.|+.+...+.+.++ -+.+.+.+.++.+.++| ++.+.+-
T Consensus 100 i~~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l~ 177 (307)
T 1ydo_A 100 VFMSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEKDVPIEQVIRLSEALFEFG--ISELSLG 177 (307)
T ss_dssp EEEESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTBCCCHHHHHHHHHHHHHHT--CSCEEEE
T ss_pred EEeecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCCCCCHHHHHHHHHHHHhcC--CCEEEEc
Confidence 8765543 2233343221 3456677888999999998877766442 36789999999999997 6554432
Q ss_pred eeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---ccC--C-cc--ccC
Q 016599 271 ALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTG--E-KL--LTT 341 (386)
Q Consensus 271 ~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g--~-~~--~t~ 341 (386)
+|- ...++.++.+++...+..+|+..+.+-+ .-.++.-.....++.+||+.+ +.| + .| -.+
T Consensus 178 ------DT~----G~~~P~~v~~lv~~l~~~~~~~~l~~H~Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGecp~a~gra 247 (307)
T 1ydo_A 178 ------DTI----GAANPAQVETVLEALLARFPANQIALHFHDTRGTALANMVTALQMGITVFDGSAGGLGGCPYAPGSS 247 (307)
T ss_dssp ------CSS----CCCCHHHHHHHHHHHHTTSCGGGEEEECBGGGSCHHHHHHHHHHHTCCEEEEBGGGCCEETTEEEEE
T ss_pred ------CCC----CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEcccccCCCCCCCCCC
Confidence 332 2357888889888888777754343321 111222233467889999987 332 2 11 135
Q ss_pred CCCChhHHHHHHHHcCCCc
Q 016599 342 PNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 342 ~~~~~~~~~~~i~~~G~~p 360 (386)
++.+.++++.+++..|+.+
T Consensus 248 GN~~~E~lv~~L~~~g~~t 266 (307)
T 1ydo_A 248 GNAATEDIVYMLEQMDIKT 266 (307)
T ss_dssp CBCBHHHHHHHHHHTTCBC
T ss_pred CChhHHHHHHHHHhcCCCC
Confidence 6788999999999988764
No 18
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=98.07 E-value=0.00041 Score=65.63 Aligned_cols=221 Identities=11% Similarity=0.063 Sum_probs=141.1
Q ss_pred CCCHHHHHHHHH-HHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh---hc-CcEEEEecCCCCHHHHHHHHHhcc
Q 016599 121 LMTKDAVMQAAQ-KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DM-GMEVCCTLGMLEKHQAIELKKAGL 195 (386)
Q Consensus 121 ~~s~eeI~~~~~-~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik---~~-g~~i~~t~g~l~~e~l~~Lk~aG~ 195 (386)
.++.++.++.++ .+.+.|++.+-+++... .|..++.+..+.+... .. +..+..-.- ..+.++...++|+
T Consensus 37 ~~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~----~~~~~~~v~~~~~~~~~~~~~~~~~i~~l~~--~~~~i~~a~~~g~ 110 (337)
T 3ble_A 37 SFSTSEKLNIAKFLLQKLNVDRVEIASARV----SKGELETVQKIMEWAATEQLTERIEILGFVD--GNKTVDWIKDSGA 110 (337)
T ss_dssp CCCHHHHHHHHHHHHHTTCCSEEEEEETTS----CTTHHHHHHHHHHHHHHTTCGGGEEEEEESS--TTHHHHHHHHHTC
T ss_pred CcCHHHHHHHHHHHHHHcCCCEEEEeCCCC----ChhHHHHHHHHHhhhhhhccCCCCeEEEEcc--chhhHHHHHHCCC
Confidence 389999999999 99999999887765321 1333444444333211 11 223322111 1227888899999
Q ss_pred CeeecccCchH-HHHhhhCCCC--CHHHHHHHHHHHHHcCCeeeEeEEe---ecCCCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 196 TAYNHNLDTSR-EFYSKIITTR--SYDERLETLKHVREAGINVCSGGII---GLGEAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 196 ~~v~i~le~~~-~~~~~i~~~~--s~~~~l~~i~~a~~~Gi~v~~~~i~---Glget~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
+.+.+.+.+.+ ....+++.+. .++...+.++.+++.|+.+..++.. +...+.+.+.+.++.+.++| ++.+.+
T Consensus 111 ~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~G--a~~i~l 188 (337)
T 3ble_A 111 KVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKINVYLEDWSNGFRNSPDYVKSLVEHLSKEH--IERIFL 188 (337)
T ss_dssp CEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEEEEEETHHHHHHHCHHHHHHHHHHHHTSC--CSEEEE
T ss_pred CEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCcCCHHHHHHHHHHHHHcC--CCEEEE
Confidence 99998766653 3444554322 4566677888889999998877665 44446788899999999997 554433
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---ccCCccccCCCCC
Q 016599 270 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNND 345 (386)
Q Consensus 270 ~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~~ 345 (386)
++|- ...++.+..+++...+..+|+..+.+-+ .-.++.-.....++.+||+.+ +.|-. ..+++.+
T Consensus 189 ------~DT~----G~~~P~~v~~lv~~l~~~~p~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~tv~GlG-~~aGN~~ 257 (337)
T 3ble_A 189 ------PDTL----GVLSPEETFQGVDSLIQKYPDIHFEFHGHNDYDLSVANSLQAIRAGVKGLHASINGLG-ERAGNTP 257 (337)
T ss_dssp ------ECTT----CCCCHHHHHHHHHHHHHHCTTSCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCS-STTCBCB
T ss_pred ------ecCC----CCcCHHHHHHHHHHHHHhcCCCeEEEEecCCcchHHHHHHHHHHhCCCEEEEeccccc-ccccchh
Confidence 2332 2357888899998888888764443321 111222233467889999987 23210 1366788
Q ss_pred hhHHHHHHHHc-CCCc
Q 016599 346 FDADQLMFKVL-GLTP 360 (386)
Q Consensus 346 ~~~~~~~i~~~-G~~p 360 (386)
.++++.+++.. |+.+
T Consensus 258 ~E~lv~~L~~~~g~~t 273 (337)
T 3ble_A 258 LEALVTTIHDKSNSKT 273 (337)
T ss_dssp HHHHHHHHHHHSSCCC
T ss_pred HHHHHHHHHHhcCCCC
Confidence 99999999887 8643
No 19
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=97.78 E-value=0.0016 Score=60.24 Aligned_cols=221 Identities=12% Similarity=0.028 Sum_probs=134.1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE--EEecCC-CCHHHHHHHHHhccCe
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV--CCTLGM-LEKHQAIELKKAGLTA 197 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i--~~t~g~-l~~e~l~~Lk~aG~~~ 197 (386)
.++.++.++.++.+.+.|++.|-+++.. . .|..++.+..+.+..+ +..+ .+.+.. --+..++.++++|++.
T Consensus 23 ~~~~~~K~~i~~~L~~~Gv~~IE~g~p~---~-~~~d~e~v~~i~~~~~--~~~i~~l~~~~~~di~~a~~~~~~ag~~~ 96 (293)
T 3ewb_X 23 NFDVKEKIQIALQLEKLGIDVIEAGFPI---S-SPGDFECVKAIAKAIK--HCSVTGLARCVEGDIDRAEEALKDAVSPQ 96 (293)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEECGG---G-CHHHHHHHHHHHHHCC--SSEEEEEEESSHHHHHHHHHHHTTCSSEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeCCC---C-CccHHHHHHHHHHhcC--CCEEEEEecCCHHHHHHHHHHHhhcCCCE
Confidence 4899999999999999999988765321 1 2334444444433332 3333 332211 0122334444579998
Q ss_pred eecccCchH-HHHhhhCCCC--CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeee
Q 016599 198 YNHNLDTSR-EFYSKIITTR--SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLA 274 (386)
Q Consensus 198 v~i~le~~~-~~~~~i~~~~--s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P 274 (386)
|.+.+-+.+ ....+++.+. ..+...+.++.+++.|+.+..+...+..-+.+.+.+.++.+.++| ++.+.+
T Consensus 97 v~i~~~~Sd~~~~~nl~~s~~e~l~~~~~~v~~a~~~g~~v~~~~~d~~~~~~~~~~~~~~~~~~~G--~~~i~l----- 169 (293)
T 3ewb_X 97 IHIFLATSDVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDAG--ATVINI----- 169 (293)
T ss_dssp EEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHHTTCSCEEEEEETGGGSCHHHHHHHHHHHHHTT--CCEEEE-----
T ss_pred EEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHhCCCEEEEEeccCCCCCHHHHHHHHHHHHHcC--CCEEEe-----
Confidence 887665543 2223333221 344555667778889998887776655567888999999999997 554432
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCc---ceeec-CcccccChhHHHhhhhcCcccc---ccCCccccCCCCChh
Q 016599 275 VKGTPLQDQKPVEIWEMIRMIATARIVMPKA---MVRLS-AGRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNNDFD 347 (386)
Q Consensus 275 ~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~---~i~i~-~g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~~~~ 347 (386)
++|- ...++.++.+++...+..+|+. .+.+- ..-.++.-.....++.+||+.+ +.|-. ..+++...+
T Consensus 170 -~DT~----G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~~vd~sv~GlG-eraGN~~~E 243 (293)
T 3ewb_X 170 -PDTV----GYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGARRVEGTINGIG-ERAGNTALE 243 (293)
T ss_dssp -ECSS----SCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCC-TTTCBCBHH
T ss_pred -cCCC----CCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCCEEEeeccccc-cccccHhHH
Confidence 2332 2357888888998888888852 22221 1111222233467889999987 22211 135678889
Q ss_pred HHHHHHHH----cCCCc
Q 016599 348 ADQLMFKV----LGLTP 360 (386)
Q Consensus 348 ~~~~~i~~----~G~~p 360 (386)
+++.+++. +|+.+
T Consensus 244 ~vv~~L~~~~~~~g~~t 260 (293)
T 3ewb_X 244 EVAVALHIRKDFYQAET 260 (293)
T ss_dssp HHHHHHHHTHHHHCEEE
T ss_pred HHHHHHHhhhhhcCCCC
Confidence 99999985 67643
No 20
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=97.73 E-value=0.0023 Score=60.60 Aligned_cols=214 Identities=12% Similarity=0.113 Sum_probs=139.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEe-----cccCCCCCChhhHHHHHHHHHHHhhc--CcEE--EEecCCCCHHHHHHHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMG-----AAWRDTIGRKTNFNQILEYVKDIRDM--GMEV--CCTLGMLEKHQAIELK 191 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~-----~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i--~~t~g~l~~e~l~~Lk 191 (386)
.++.++.++.++.+.+.|++.+-++ ++..+..|.+ ...-.+.++.+++. +..+ ...++....+.+++..
T Consensus 26 ~~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~--~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~ 103 (345)
T 1nvm_A 26 QYTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFG--RHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAY 103 (345)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCC--SSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCC--CCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHH
Confidence 3899999999999999999998874 1111111211 12234455555432 4443 2244555788999999
Q ss_pred HhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeee
Q 016599 192 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 192 ~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~ 271 (386)
++|++.+.+.+ .. ...+...+.++.+++.|+.+...+.-...-+.+.+.+.++.+.+.| ++.+.+
T Consensus 104 ~aGvd~v~I~~-~~----------s~~~~~~~~i~~ak~~G~~v~~~~~~a~~~~~e~~~~ia~~~~~~G--a~~i~l-- 168 (345)
T 1nvm_A 104 QAGARVVRVAT-HC----------TEADVSKQHIEYARNLGMDTVGFLMMSHMIPAEKLAEQGKLMESYG--ATCIYM-- 168 (345)
T ss_dssp HHTCCEEEEEE-ET----------TCGGGGHHHHHHHHHHTCEEEEEEESTTSSCHHHHHHHHHHHHHHT--CSEEEE--
T ss_pred hCCcCEEEEEE-ec----------cHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCHHHHHHHHHHHHHCC--CCEEEE--
Confidence 99999988753 11 1124556788899999999887776556667889999999999886 554333
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCC-CcceeecC-cccccChhHHHhhhhcCcccc---ccCCccccCCCCCh
Q 016599 272 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMP-KAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNNDF 346 (386)
Q Consensus 272 f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp-~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~~~ 346 (386)
++|- ...++.++.+++...|..+| +..+.+.+ .-.++.-.....++.+||+.+ +.|-. ..+.+.+.
T Consensus 169 ----~DT~----G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~avAn~laA~~aGa~~vd~tv~GlG-~~aGN~~l 239 (345)
T 1nvm_A 169 ----ADSG----GAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLGVANSIVAVEEGCDRVDASLAGMG-AGAGNAPL 239 (345)
T ss_dssp ----ECTT----CCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-STTCBCBH
T ss_pred ----CCCc----CccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHHHHHHHHHHHcCCCEEEecchhcc-CCccCcCH
Confidence 2442 12357888899998888886 44333321 111222233467888999877 32211 13677888
Q ss_pred hHHHHHHHHcCCCc
Q 016599 347 DADQLMFKVLGLTP 360 (386)
Q Consensus 347 ~~~~~~i~~~G~~p 360 (386)
++.+.+++..|+.+
T Consensus 240 e~lv~~L~~~g~~~ 253 (345)
T 1nvm_A 240 EVFIAVAERLGWNH 253 (345)
T ss_dssp HHHHHHHHHHTCBC
T ss_pred HHHHHHHHhcCCCC
Confidence 99999999888753
No 21
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=97.57 E-value=0.0077 Score=58.32 Aligned_cols=209 Identities=15% Similarity=0.118 Sum_probs=127.1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCc--EEEEecCCCCHHHHHHHHHhccCee
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGM--EVCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~--~i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
.++.++-++.++.+.+.|++.|-++. |. .-+...+.++.+.+.+. .++. ....+.+-++...++|++.|
T Consensus 57 ~~s~eeKl~Ia~~L~~~Gv~~IEvG~---P~-----asp~d~~~~~~i~~~~~~~~v~~-~~r~~~~di~~A~~aG~~~V 127 (423)
T 3ivs_A 57 FFDTEKKIQIAKALDNFGVDYIELTS---PV-----ASEQSRQDCEAICKLGLKCKILT-HIRCHMDDARVAVETGVDGV 127 (423)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC---TT-----SCHHHHHHHHHHHTSCCSSEEEE-EEESCHHHHHHHHHTTCSEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEee---cc-----cCHHHHHHHHHHHhcCCCCEEEE-eeccChhhHHHHHHcCCCEE
Confidence 48999999999999999999887643 21 12334445555554433 3322 12245667888899999999
Q ss_pred ecccCchHHHHh--hhCCCC--CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeee
Q 016599 199 NHNLDTSREFYS--KIITTR--SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLA 274 (386)
Q Consensus 199 ~i~le~~~~~~~--~i~~~~--s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P 274 (386)
.+.+-+.+ .+. +++.+. ..+...+.++.+++.|+.+.....-+...+.+.+.+.++.+.+.| ++.+.+
T Consensus 128 ~i~~s~Sd-~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~V~~~~eda~r~d~~~~~~v~~~~~~~G--a~~i~l----- 199 (423)
T 3ivs_A 128 DVVIGTSQ-YLRKYSHGKDMTYIIDSATEVINFVKSKGIEVRFSSEDSFRSDLVDLLSLYKAVDKIG--VNRVGI----- 199 (423)
T ss_dssp EEEEEC--------------CHHHHHHHHHHHHHHTTTCEEEEEEESGGGSCHHHHHHHHHHHHHHC--CSEEEE-----
T ss_pred EEEeeccH-HHHHHHcCCCHHHHHHHHHHHHHHHHHCCCEEEEEEccCcCCCHHHHHHHHHHHHHhC--CCcccc-----
Confidence 88765552 222 222221 356777889999999999888777666778899999999999987 554322
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---ccCCccccCCCCChhHHH
Q 016599 275 VKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNNDFDADQ 350 (386)
Q Consensus 275 ~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~~~~~~~ 350 (386)
++|- ...++.++.+++...+...+ ..+.+.+ .-.++.-.....++.+||+.+ +.|-. ..+++.+.+++.
T Consensus 200 -~DTv----G~~~P~~v~~lv~~l~~~~~-~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlG-ERaGNa~Le~vv 272 (423)
T 3ivs_A 200 -ADTV----GCATPRQVYDLIRTLRGVVS-CDIECHFHNDTGMAIANAYCALEAGATHIDTSILGIG-ERNGITPLGALL 272 (423)
T ss_dssp -EETT----SCCCHHHHHHHHHHHHHHCS-SEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-STTCBCBHHHHH
T ss_pred -CCcc----CcCCHHHHHHHHHHHHhhcC-CeEEEEECCCCchHHHHHHHHHHhCCCEEEEeccccc-CcccchhHHHHH
Confidence 2332 23467777788777666553 2232211 111222223467888999987 33210 124455666655
Q ss_pred HHH
Q 016599 351 LMF 353 (386)
Q Consensus 351 ~~i 353 (386)
..+
T Consensus 273 ~~L 275 (423)
T 3ivs_A 273 ARM 275 (423)
T ss_dssp HHH
T ss_pred HHH
Confidence 443
No 22
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=97.48 E-value=0.015 Score=55.42 Aligned_cols=218 Identities=14% Similarity=0.117 Sum_probs=134.2
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE--EEecCCCCHHHHH----HHHHhc
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV--CCTLGMLEKHQAI----ELKKAG 194 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i--~~t~g~l~~e~l~----~Lk~aG 194 (386)
.++.++.++.++.+.+.|++.+-.+. +. ..|..++.+..+.+.++ +..+ .+.. ..+.++ .++.+|
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~---p~-~~~~d~e~v~~i~~~~~--~~~i~~l~r~---~~~di~~a~~al~~ag 100 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGF---AA-ASPGDFEAVNAIAKTIT--KSTVCSLSRA---IERDIRQAGEAVAPAP 100 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEE---GG-GCHHHHHHHHHHHTTCS--SSEEEEEEES---SHHHHHHHHHHHTTSS
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeC---CC-CCHHHHHHHHHHHHhCC--CCeEEEEecC---CHHHHHHHHHHHhhCC
Confidence 48999999999999999999876643 11 12334444444433322 2332 2221 233334 444589
Q ss_pred cCeeecccCchH-HHHhhhCCCC--CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeee
Q 016599 195 LTAYNHNLDTSR-EFYSKIITTR--SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 195 ~~~v~i~le~~~-~~~~~i~~~~--s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~ 271 (386)
++.|.+.+-+.+ ....+++.+. ..+...+.++.+++.|..+..+...+...+.+.+.+.++.+.+.| ++.+.+
T Consensus 101 ~~~v~if~~~Sd~h~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~~~~ed~~r~~~~~~~~~~~~~~~~G--a~~i~l-- 176 (370)
T 3rmj_A 101 KKRIHTFIATSPIHMEYKLKMKPKQVIEAAVKAVKIAREYTDDVEFSCEDALRSEIDFLAEICGAVIEAG--ATTINI-- 176 (370)
T ss_dssp SEEEEEEEECSHHHHHHTTCCCHHHHHHHHHHHHHHHTTTCSCEEEEEETGGGSCHHHHHHHHHHHHHHT--CCEEEE--
T ss_pred CCEEEEEecCcHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCCEEEEecCCCCccCHHHHHHHHHHHHHcC--CCEEEe--
Confidence 999988776653 3333443321 344455567788889998877777766678889999999999997 554332
Q ss_pred eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC---cceeecC-cccccChhHHHhhhhcCcccc---ccCCccccCCCC
Q 016599 272 LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPK---AMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNN 344 (386)
Q Consensus 272 f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~---~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~ 344 (386)
++|- ...++.++.+++...+..+|+ ..+.+-+ .-.++.-.....++.+||+.+ +.|-. ..+++.
T Consensus 177 ----~DT~----G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlG-eraGN~ 247 (370)
T 3rmj_A 177 ----PDTV----GYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGARQVECTVNGLG-ERAGNA 247 (370)
T ss_dssp ----ECSS----SCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-STTCBC
T ss_pred ----cCcc----CCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccC-cccccc
Confidence 3442 235688888888888888875 3333221 111222223467889999987 33311 135667
Q ss_pred ChhHHHHHHHH----cCCCc
Q 016599 345 DFDADQLMFKV----LGLTP 360 (386)
Q Consensus 345 ~~~~~~~~i~~----~G~~p 360 (386)
+.++++.+++. +|+.+
T Consensus 248 ~lE~vv~~L~~~~~~~g~~t 267 (370)
T 3rmj_A 248 SVEEIVMALKVRHDLFGLET 267 (370)
T ss_dssp BHHHHHHHHHHTHHHHCCBC
T ss_pred cHHHHHHHHHhhhhccCCCC
Confidence 88888877763 46644
No 23
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=97.40 E-value=0.009 Score=56.02 Aligned_cols=220 Identities=12% Similarity=0.129 Sum_probs=136.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHh----ccC
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA----GLT 196 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~a----G~~ 196 (386)
.++.++.++.++.+.+.|++.+-++. +.. .|..++.+..+.+.++ +..+..- .....+.++.-.++ |++
T Consensus 24 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~---p~~-~~~d~e~v~~i~~~~~--~~~i~~l-~r~~~~~i~~a~~al~~ag~~ 96 (325)
T 3eeg_A 24 QLNTEEKIIVAKALDELGVDVIEAGF---PVS-SPGDFNSVVEITKAVT--RPTICAL-TRAKEADINIAGEALRFAKRS 96 (325)
T ss_dssp -CCTTHHHHHHHHHHHHTCSEEEEEC---TTS-CHHHHHHHHHHHHHCC--SSEEEEE-CCSCHHHHHHHHHHHTTCSSE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEeC---CCC-CHhHHHHHHHHHHhCC--CCEEEEe-ecCCHHHHHHHHHhhcccCCC
Confidence 48899999999999999999886643 221 2334444443333322 3343221 11234445544444 999
Q ss_pred eeecccCchH-HHHhhhCC--CCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeee
Q 016599 197 AYNHNLDTSR-EFYSKIIT--TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALL 273 (386)
Q Consensus 197 ~v~i~le~~~-~~~~~i~~--~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~ 273 (386)
.|.+.+-+.+ ....+++. ...++...+.++.+++.|+.+..+...+..-+.+.+.+.++.+.+.| ++.+.
T Consensus 97 ~v~i~~s~Sd~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~f~~~d~~~~~~~~~~~~~~~~~~~G--~~~i~----- 169 (325)
T 3eeg_A 97 RIHTGIGSSDIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVEFFCEDAGRADQAFLARMVEAVIEAG--ADVVN----- 169 (325)
T ss_dssp EEEEEEECSHHHHC----CCCTTGGGTTHHHHHHHHTTSSEEEEEEETGGGSCHHHHHHHHHHHHHHT--CSEEE-----
T ss_pred EEEEEecccHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEEEEccccccchHHHHHHHHHHHHhcC--CCEEE-----
Confidence 9887655553 22233433 33577788899999999999887777766667888899999999887 55432
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC---cceeecC-cccccChhHHHhhhhcCcccc---ccCCccccCCCCCh
Q 016599 274 AVKGTPLQDQKPVEIWEMIRMIATARIVMPK---AMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNNDF 346 (386)
Q Consensus 274 P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~---~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~~~ 346 (386)
.++|- ...++.++.+++...+..+|+ ..+.+-+ .-.++.-.....++.+||+.+ +.|-. ..+++.+.
T Consensus 170 -l~DT~----G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~aGa~~vd~tv~GlG-er~GN~~l 243 (325)
T 3eeg_A 170 -IPDTT----GYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQNGARQVECTINGIG-ERAGNTAL 243 (325)
T ss_dssp -CCBSS----SCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHHTCCEEEEBGGGCC-STTCCCBH
T ss_pred -ecCcc----CCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHhCCCEEEEeccccc-ccccchhH
Confidence 23442 235778888999888888885 3333321 111222223466888999987 32211 13567888
Q ss_pred hHHHHHHHH----cCCCc
Q 016599 347 DADQLMFKV----LGLTP 360 (386)
Q Consensus 347 ~~~~~~i~~----~G~~p 360 (386)
++++.+++. +|+.+
T Consensus 244 E~vv~~L~~~~~~~g~~t 261 (325)
T 3eeg_A 244 EEVVMAMECHKETLGLET 261 (325)
T ss_dssp HHHHHHHHHTHHHHCEEC
T ss_pred HHHHHHHHhhhhccCCCC
Confidence 998888884 56643
No 24
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=97.22 E-value=0.02 Score=54.93 Aligned_cols=209 Identities=14% Similarity=0.154 Sum_probs=126.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCc--EEEEecCCCCHHHHHHHHHhccCee
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGM--EVCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~--~i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
.++.++.++.++.+.+.|++.+-+++ | ...+...+.++.+++.+. .++.-+ ....+.++...++|++.+
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~---p-----~~~~~~~~~~~~i~~~~~~~~v~~~~-r~~~~di~~a~~~g~~~v 91 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTT---P-----VASPQSRKDAEVLASLGLKAKVVTHI-QCRLDAAKVAVETGVQGI 91 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECC---T-----TSCHHHHHHHHHHHTSCCSSEEEEEE-ESCHHHHHHHHHTTCSEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcC---C-----cCCHHHHHHHHHHHhcCCCcEEEEEc-ccChhhHHHHHHcCCCEE
Confidence 48999999999999999999887743 1 122344566666665443 333221 124666889999999998
Q ss_pred ecccCchHHHHhhhCCCCC----HHHHHHHHHHHHHcC--CeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeee
Q 016599 199 NHNLDTSREFYSKIITTRS----YDERLETLKHVREAG--INVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINAL 272 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s----~~~~l~~i~~a~~~G--i~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f 272 (386)
.+.+-+.+ .+.. .-+.+ ++...++++.+++.| +.+...+.-+...+.+.+.+.++.+.+. ++.+.+
T Consensus 92 ~i~~~~s~-~~~~-~~~~s~~e~l~~~~~~v~~ak~~g~~~~v~~~~ed~~~~~~~~~~~~~~~~~~~---a~~i~l--- 163 (382)
T 2ztj_A 92 DLLFGTSK-YLRA-PHGRDIPRIIEEAKEVIAYIREAAPHVEVRFSAEDTFRSEEQDLLAVYEAVAPY---VDRVGL--- 163 (382)
T ss_dssp EEEECC----------CCCHHHHHHHHHHHHHHHHHHCTTSEEEEEETTTTTSCHHHHHHHHHHHGGG---CSEEEE---
T ss_pred EEEeccCH-HHHH-HhCCCHHHHHHHHHHHHHHHHHcCCCEEEEEEEEeCCCCCHHHHHHHHHHHHHh---cCEEEe---
Confidence 87664443 2222 22344 455677888999999 8887776665566788888888888766 233222
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhC-CCcceeecC-cccccChhHHHhhhhcCcccc---ccCCccccCCCCChh
Q 016599 273 LAVKGTPLQDQKPVEIWEMIRMIATARIVM-PKAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNNDFD 347 (386)
Q Consensus 273 ~P~~gT~l~~~~~~s~~e~~~~~a~~R~~l-p~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~~~~ 347 (386)
++|- ....+.++.+++...+..+ ++..+.+-+ .-.++.-.....++.+||+.+ +.|-. ..+++.+.+
T Consensus 164 ---~DT~----G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~tv~GlG-eraGN~~lE 235 (382)
T 2ztj_A 164 ---ADTV----GVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDTTILGIG-ERNGITPLG 235 (382)
T ss_dssp ---EETT----SCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCS-STTCBCBHH
T ss_pred ---cCCC----CCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEEcccccc-ccccchhHH
Confidence 2332 2246788888887777654 443333321 111222233467889999987 33210 134556666
Q ss_pred HHHHHHH
Q 016599 348 ADQLMFK 354 (386)
Q Consensus 348 ~~~~~i~ 354 (386)
+++..++
T Consensus 236 ~vv~~L~ 242 (382)
T 2ztj_A 236 GFLARMY 242 (382)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6664443
No 25
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=97.21 E-value=0.0047 Score=61.62 Aligned_cols=215 Identities=13% Similarity=0.109 Sum_probs=136.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCC-----CCCChhhHHHHHHHHHHHhhcCcEEEEe--c--CC------CCHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRD-----TIGRKTNFNQILEYVKDIRDMGMEVCCT--L--GM------LEKH 185 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~-----~~ge~~~~~~l~~~i~~ik~~g~~i~~t--~--g~------l~~e 185 (386)
.++.++.++.++.+.+.|+..+-++++... ..+ +..++.+..+.+.++...+...+. | |. +.+.
T Consensus 43 ~~~tedKl~Ia~~L~~~Gv~~IE~G~patF~~~~rfl~-~d~~e~lr~l~~~~~~~~l~~L~R~~N~~G~~~ypddv~~~ 121 (539)
T 1rqb_A 43 RMAMEDMVGACADIDAAGYWSVECWGGATYDSCIRFLN-EDPWERLRTFRKLMPNSRLQMLLRGQNLLGYRHYNDEVVDR 121 (539)
T ss_dssp CCCGGGTGGGHHHHHHTTCSEEEEEETTHHHHHHHTSC-CCHHHHHHHHHHHCTTSCEEEEECGGGTTSSSCCCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCcccccccchhccC-CCHHHHHHHHHHhCCCCEEEEEeccccccCcccCcccccHH
Confidence 378999999999999999999988764320 001 223333333333333333333332 1 32 1366
Q ss_pred HHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeE--EeecCCCHHHHHHHHHHHhcCCCC
Q 016599 186 QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGG--IIGLGEAEEDRVGLLHTLATLPTH 263 (386)
Q Consensus 186 ~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~--i~Glget~ed~~~~l~~l~~l~~~ 263 (386)
.++...++|++.+.+..-. .+.+...++++.+++.|..+...+ ..|...+.+.+.+.++.+.+.|
T Consensus 122 ~ve~a~~aGvd~vrIf~s~-----------sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G-- 188 (539)
T 1rqb_A 122 FVDKSAENGMDVFRVFDAM-----------NDPRNMAHAMAAVKKAGKHAQGTICYTISPVHTVEGYVKLAGQLLDMG-- 188 (539)
T ss_dssp HHHHHHHTTCCEEEECCTT-----------CCTHHHHHHHHHHHHTTCEEEEEEECCCSTTCCHHHHHHHHHHHHHTT--
T ss_pred HHHHHHhCCCCEEEEEEeh-----------hHHHHHHHHHHHHHHCCCeEEEEEEeeeCCCCCHHHHHHHHHHHHHcC--
Confidence 7888999999988874322 223566789999999999876555 4566678999999999999997
Q ss_pred CCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCC-CcceeecC-cccccChhHHHhhhhcCcccc---ccCCcc
Q 016599 264 PESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMP-KAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKL 338 (386)
Q Consensus 264 ~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp-~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~ 338 (386)
++.+.+ ++|- ....+.++.+++...+..+| +..+.+-+ .-.++.-.....++.+||+.+ +.|-.
T Consensus 189 ad~I~L------~DT~----G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ti~g~G- 257 (539)
T 1rqb_A 189 ADSIAL------KDMA----ALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDTAISSMS- 257 (539)
T ss_dssp CSEEEE------EETT----CCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEEBCGGGC-
T ss_pred CCEEEe------CCCC----CCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEEeccccC-
Confidence 554433 2332 22467888888888877776 44343321 111222223467889999987 22211
Q ss_pred ccCCCCChhHHHHHHHHcCCCc
Q 016599 339 LTTPNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 339 ~t~~~~~~~~~~~~i~~~G~~p 360 (386)
..+++.+.++++.+++..|+.+
T Consensus 258 ertGN~~lE~lv~~L~~~g~~t 279 (539)
T 1rqb_A 258 LGPGHNPTESVAEMLEGTGYTT 279 (539)
T ss_dssp STTSBCBHHHHHHHTTTSSEEC
T ss_pred CCccChhHHHHHHHHHhcCCCc
Confidence 1266788888888888877654
No 26
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=97.15 E-value=0.025 Score=55.47 Aligned_cols=213 Identities=10% Similarity=0.087 Sum_probs=133.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC-----CCCChhhHHHHHHHHHHHhhcCcEEEEe--c--CCC------CHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD-----TIGRKTNFNQILEYVKDIRDMGMEVCCT--L--GML------EKHQ 186 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~-----~~ge~~~~~~l~~~i~~ik~~g~~i~~t--~--g~l------~~e~ 186 (386)
++.++.++.++.+.+.|+..+-.+++... ..+ +..++.+..+.+.++...+...+. | |.. .+..
T Consensus 27 ~~~~dkl~Ia~~L~~~Gv~~IE~g~~atF~~~~r~~~-~d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~ 105 (464)
T 2nx9_A 27 LRIDDMLPIAQQLDQIGYWSLECWGGATFDSCIRFLG-EDPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTF 105 (464)
T ss_dssp CCGGGTGGGHHHHHTSCCSEEEEEETTHHHHHHHTTC-CCHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCcCccccchhhccC-CCHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHH
Confidence 78899999999999999999887654310 001 223333333332222223333332 1 322 2566
Q ss_pred HHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeE--EeecCCCHHHHHHHHHHHhcCCCCC
Q 016599 187 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGG--IIGLGEAEEDRVGLLHTLATLPTHP 264 (386)
Q Consensus 187 l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~--i~Glget~ed~~~~l~~l~~l~~~~ 264 (386)
++...++|++.+.+..-. .+.+...++++.+++.|..+...+ ..|...+.+.+.+.++.+.+.| +
T Consensus 106 v~~a~~~Gvd~i~if~~~-----------sd~~ni~~~i~~ak~~G~~v~~~i~~~~~~~~~~e~~~~~a~~l~~~G--a 172 (464)
T 2nx9_A 106 VERAVKNGMDVFRVFDAM-----------NDVRNMQQALQAVKKMGAHAQGTLCYTTSPVHNLQTWVDVAQQLAELG--V 172 (464)
T ss_dssp HHHHHHTTCCEEEECCTT-----------CCTHHHHHHHHHHHHTTCEEEEEEECCCCTTCCHHHHHHHHHHHHHTT--C
T ss_pred HHHHHhCCcCEEEEEEec-----------CHHHHHHHHHHHHHHCCCEEEEEEEeeeCCCCCHHHHHHHHHHHHHCC--C
Confidence 788889999988874322 223566788999999999876555 4455668999999999999997 6
Q ss_pred CeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---ccCCcccc
Q 016599 265 ESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLT 340 (386)
Q Consensus 265 ~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t 340 (386)
+.+.+- +|- ....+.+..+++...+..+ +..+.+-+ .-.++.-.....++.+||+.+ +.|-. ..
T Consensus 173 d~I~l~------DT~----G~~~P~~v~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ti~g~g-er 240 (464)
T 2nx9_A 173 DSIALK------DMA----GILTPYAAEELVSTLKKQV-DVELHLHCHSTAGLADMTLLKAIEAGVDRVDTAISSMS-GT 240 (464)
T ss_dssp SEEEEE------ETT----SCCCHHHHHHHHHHHHHHC-CSCEEEEECCTTSCHHHHHHHHHHTTCSEEEEBCGGGC-ST
T ss_pred CEEEEc------CCC----CCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCChHHHHHHHHHHhCCCEEEEeccccC-CC
Confidence 544332 222 2246788888888777666 33333221 111222223467889999987 22211 12
Q ss_pred CCCCChhHHHHHHHHcCCCc
Q 016599 341 TPNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 341 ~~~~~~~~~~~~i~~~G~~p 360 (386)
+++.+.++++.+++..|+.+
T Consensus 241 tGN~~lE~lv~~L~~~g~~t 260 (464)
T 2nx9_A 241 YGHPATESLVATLQGTGYDT 260 (464)
T ss_dssp TSCCBHHHHHHHHTTSTTCC
T ss_pred CcCHHHHHHHHHHHhcCCCc
Confidence 67789999999999888764
No 27
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=97.08 E-value=0.042 Score=56.80 Aligned_cols=214 Identities=11% Similarity=0.017 Sum_probs=138.4
Q ss_pred CCHHHHHHHHHHHHHc--CCcEEEEecccCC-----CCCChhhHHHHHHHHHHHhhcCcEEEEe--c--CC------CCH
Q 016599 122 MTKDAVMQAAQKAKEA--GSTRFCMGAAWRD-----TIGRKTNFNQILEYVKDIRDMGMEVCCT--L--GM------LEK 184 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~--G~~~v~l~~g~~~-----~~ge~~~~~~l~~~i~~ik~~g~~i~~t--~--g~------l~~ 184 (386)
++.++.++.++.+.+. |+..+-++||... ..++ ..++.+.++.+.+++..+..... + |. +..
T Consensus 122 ~~~edkl~Ia~~Ld~~Gvg~~~IE~gGGatfd~~~~f~~e-~p~e~l~~l~~~~~~~~l~~l~R~~n~vgy~~~p~~~~~ 200 (718)
T 3bg3_A 122 VRTHDLKKIAPYVAHNFSKLFSMENWGGATFDVAMRFLYE-CPWRRLQELRELIPNIPFQMLLRGANAVGYTNYPDNVVF 200 (718)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHTSCC-CHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCcEEEecCCcchhhccccCCC-CHHHHHHHHHHHcccchHHHHhcccccccccccCCcchH
Confidence 7899999999999987 5666776644320 1121 34555555555555443333332 1 21 135
Q ss_pred HHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEee---c-----CCCHHHHHHHHHH
Q 016599 185 HQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIG---L-----GEAEEDRVGLLHT 256 (386)
Q Consensus 185 e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~G---l-----get~ed~~~~l~~ 256 (386)
+.++...++|++.+.+.. +. ...+....+++.+++.|..+...+.+. . ..+.+.+.+.++.
T Consensus 201 ~~i~~a~~~Gvd~irIf~-s~----------n~l~~l~~~i~~ak~~G~~v~~~i~~~~d~~dp~r~~~~~e~~~~~a~~ 269 (718)
T 3bg3_A 201 KFCEVAKENGMDVFRVFD-SL----------NYLPNMLLGMEAAGSAGGVVEAAISYTGDVADPSRTKYSLQYYMGLAEE 269 (718)
T ss_dssp HHHHHHHHHTCCEEEEEC-SS----------CCHHHHHHHHHHHHTTTSEEEEEEECCSCTTCTTCCTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCcCEEEEEe-cH----------HHHHHHHHHHHHHHHcCCeEEEEEEeeccccCCCCCCCCHHHHHHHHHH
Confidence 778888999999987743 11 245677788999999998877766665 1 1267888999999
Q ss_pred HhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---
Q 016599 257 LATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI--- 332 (386)
Q Consensus 257 l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~--- 332 (386)
+.+.| ++.+.+ ++|- ....+.++.+++...+..+|+..+.+.+ .-.++.-.....++.+||+.+
T Consensus 270 l~~~G--a~~I~l------~DT~----G~~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~t 337 (718)
T 3bg3_A 270 LVRAG--THILCI------KDMA----GLLKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACAQAGADVVDVA 337 (718)
T ss_dssp HHHHT--CSEEEE------ECTT----SCCCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred HHHcC--CCEEEE------cCcC----CCcCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHHHhCCCEEEec
Confidence 99887 554433 2332 2356888889999888888765454432 112222233467889999987
Q ss_pred ccCCccccCCCCChhHHHHHHHHcCCCc
Q 016599 333 FTGEKLLTTPNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 333 ~~g~~~~t~~~~~~~~~~~~i~~~G~~p 360 (386)
+.|- =..+.+.+.++++.+++..|+.+
T Consensus 338 i~Gl-GertGN~~lE~vv~~L~~~g~~t 364 (718)
T 3bg3_A 338 ADSM-SGMTSQPSMGALVACTRGTPLDT 364 (718)
T ss_dssp CGGG-CSTTSCCBHHHHHHHHTTSTTCC
T ss_pred Cccc-ccccCchhHHHHHHHHHhcCCCc
Confidence 2221 01367788999999999887653
No 28
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=96.84 E-value=0.19 Score=45.59 Aligned_cols=196 Identities=18% Similarity=0.215 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCc
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 204 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~ 204 (386)
...+.++.+.+.|+..+.+.+ ++..|.--++.++.+++ .++++......+++..+...+.+|.|.|.+....
T Consensus 73 ~p~~~A~~y~~~GA~~isvlt-------d~~~f~Gs~~~l~~ir~~v~lPvl~kdfiid~~qv~~A~~~GAD~VlLi~a~ 145 (272)
T 3qja_A 73 DPAKLAQAYQDGGARIVSVVT-------EQRRFQGSLDDLDAVRASVSIPVLRKDFVVQPYQIHEARAHGADMLLLIVAA 145 (272)
T ss_dssp CHHHHHHHHHHTTCSEEEEEC-------CGGGHHHHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEEGGG
T ss_pred CHHHHHHHHHHcCCCEEEEec-------ChhhcCCCHHHHHHHHHhCCCCEEECccccCHHHHHHHHHcCCCEEEEeccc
Confidence 334556677778999887764 23455555566666663 5777766666788888999999999999986544
Q ss_pred hHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCC
Q 016599 205 SREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQK 284 (386)
Q Consensus 205 ~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~ 284 (386)
+ +.++..+.++.+++.|+.+-.. . .|.+++...+ ++| ++.++++.. ..+.+
T Consensus 146 l-----------~~~~l~~l~~~a~~lGl~~lve----v-~t~ee~~~A~----~~G--ad~IGv~~r---~l~~~---- 196 (272)
T 3qja_A 146 L-----------EQSVLVSMLDRTESLGMTALVE----V-HTEQEADRAL----KAG--AKVIGVNAR---DLMTL---- 196 (272)
T ss_dssp S-----------CHHHHHHHHHHHHHTTCEEEEE----E-SSHHHHHHHH----HHT--CSEEEEESB---CTTTC----
T ss_pred C-----------CHHHHHHHHHHHHHCCCcEEEE----c-CCHHHHHHHH----HCC--CCEEEECCC---ccccc----
Confidence 3 1334445567788889874321 1 3566654433 455 788888732 11111
Q ss_pred CCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHHcCCCcCCCC
Q 016599 285 PVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKVLGLTPKAPS 364 (386)
Q Consensus 285 ~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~~G~~p~~~~ 364 (386)
.++.+.+.++ +...|....-+..|-++ +++.-.....+||+.+..|+.+... .++.+..+.+.++|..|..|.
T Consensus 197 ~~dl~~~~~l----~~~v~~~~pvVaegGI~-t~edv~~l~~~GadgvlVGsal~~a--~dp~~~~~~l~~~~~~~~~~~ 269 (272)
T 3qja_A 197 DVDRDCFARI----APGLPSSVIRIAESGVR-GTADLLAYAGAGADAVLVGEGLVTS--GDPRAAVADLVTAGTHPSCPK 269 (272)
T ss_dssp CBCTTHHHHH----GGGSCTTSEEEEESCCC-SHHHHHHHHHTTCSEEEECHHHHTC--SCHHHHHHHHHTTTTCSCCCC
T ss_pred ccCHHHHHHH----HHhCcccCEEEEECCCC-CHHHHHHHHHcCCCEEEEcHHHhCC--CCHHHHHHHHHhhhcCCcCCc
Confidence 1233332222 22345322333322222 1333355677899999999866544 478888888889988776654
No 29
>3inp_A D-ribulose-phosphate 3-epimerase; IDP02542, isomerase, struc genomics, center for structural genomics of infectious DISE csgid; 2.05A {Francisella tularensis subsp}
Probab=96.67 E-value=0.027 Score=50.46 Aligned_cols=199 Identities=14% Similarity=0.092 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEE-ecccC----CCCCChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCM-GAAWR----DTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l-~~g~~----~~~ge~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~aG~ 195 (386)
.+...+.++++.+.+.|++-+.+ +..+. .+.| ..+.+.++... +..+.+..... -....++.+.++|+
T Consensus 37 aD~~~L~~~i~~l~~~G~d~lHvDVmDg~FVpnit~G-----~~~v~~lr~~~p~~~ldvHLmv~-~p~~~i~~~~~aGA 110 (246)
T 3inp_A 37 ADLARLGDDVKAVLAAGADNIHFDVMDNHYVPNLTFG-----PMVLKALRDYGITAGMDVHLMVK-PVDALIESFAKAGA 110 (246)
T ss_dssp SCGGGHHHHHHHHHHTTCCCEEEEEEBSSSSSCBCCC-----HHHHHHHHHHTCCSCEEEEEECS-SCHHHHHHHHHHTC
T ss_pred CChhhHHHHHHHHHHcCCCEEEEEecCCCcCcchhcC-----HHHHHHHHHhCCCCeEEEEEeeC-CHHHHHHHHHHcCC
Confidence 34455666677777788876655 22222 1223 23444444433 33333322211 23668999999999
Q ss_pred CeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeec
Q 016599 196 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 275 (386)
Q Consensus 196 ~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~ 275 (386)
|.+.+..|+.+ .. .++++.++++|+++...+- .+...+.+...+ .. ++.+-+....
T Consensus 111 d~itvH~Ea~~----------~~---~~~i~~ir~~G~k~Gvaln--p~Tp~e~l~~~l---~~----vD~VlvMsV~-- 166 (246)
T 3inp_A 111 TSIVFHPEASE----------HI---DRSLQLIKSFGIQAGLALN--PATGIDCLKYVE---SN----IDRVLIMSVN-- 166 (246)
T ss_dssp SEEEECGGGCS----------CH---HHHHHHHHTTTSEEEEEEC--TTCCSGGGTTTG---GG----CSEEEEECSC--
T ss_pred CEEEEccccch----------hH---HHHHHHHHHcCCeEEEEec--CCCCHHHHHHHH---hc----CCEEEEeeec--
Confidence 99999877631 22 3666777889987655432 233333332222 21 4566555443
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHH
Q 016599 276 KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 355 (386)
Q Consensus 276 ~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~ 355 (386)
||..-+...+.+.+++.++.+.....-.+..+.+.+| ++++....+..+|||.++.|. ..... .++.+..+.+++
T Consensus 167 PGfgGQ~fi~~~l~KI~~lr~~~~~~~~~~~I~VDGG---I~~~ti~~~~~aGAD~~V~GS-aIf~a-~dp~~~i~~l~~ 241 (246)
T 3inp_A 167 PGFGGQKFIPAMLDKAKEISKWISSTDRDILLEIDGG---VNPYNIAEIAVCGVNAFVAGS-AIFNS-DSYKQTIDKMRD 241 (246)
T ss_dssp TTC--CCCCTTHHHHHHHHHHHHHHHTSCCEEEEESS---CCTTTHHHHHTTTCCEEEESH-HHHTS-SCHHHHHHHHHH
T ss_pred CCCCCcccchHHHHHHHHHHHHHHhcCCCeeEEEECC---cCHHHHHHHHHcCCCEEEEeh-HHhCC-CCHHHHHHHHHH
Confidence 3542222222233333332222222222334555553 333445678899999999886 33322 355555555543
No 30
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=96.41 E-value=0.11 Score=46.09 Aligned_cols=204 Identities=16% Similarity=0.118 Sum_probs=113.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccC
Q 016599 125 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 203 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le 203 (386)
++..+.++.+.+.|++.+.+...... + .......+.++.+++ .++++..+.+..+.+.++.+.++|++.+.++-.
T Consensus 33 ~~~~~~a~~~~~~G~d~i~v~~~~~~--~--~~~~~~~~~i~~i~~~~~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~~ 108 (253)
T 1h5y_A 33 GDPVEMAVRYEEEGADEIAILDITAA--P--EGRATFIDSVKRVAEAVSIPVLVGGGVRSLEDATTLFRAGADKVSVNTA 108 (253)
T ss_dssp ECHHHHHHHHHHTTCSCEEEEECCCC--T--TTHHHHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEESHH
T ss_pred ccHHHHHHHHHHcCCCEEEEEeCCcc--c--cCCcccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEChH
Confidence 35666777778889988877532111 1 123345667777764 477888888888899999999999999998743
Q ss_pred chHHHHhhhCCCCCHHHHHHHHHHHHHcCC---eeeEeE-------Eeec-CC---CHHHHHHHHHHHhcCCCCCCeEee
Q 016599 204 TSREFYSKIITTRSYDERLETLKHVREAGI---NVCSGG-------IIGL-GE---AEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 204 ~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi---~v~~~~-------i~Gl-ge---t~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
... +.+...+ .+++.|. .+..++ .+-. +. +..+..+.++.+.+++ ++.+.+
T Consensus 109 ~~~----------~~~~~~~---~~~~~g~~~i~~~~~~~~~~g~~~v~~~~~~~~~~~~~~e~~~~~~~~G--~d~i~~ 173 (253)
T 1h5y_A 109 AVR----------NPQLVAL---LAREFGSQSTVVAIDAKWNGEYYEVYVKGGREATGLDAVKWAKEVEELG--AGEILL 173 (253)
T ss_dssp HHH----------CTHHHHH---HHHHHCGGGEEEEEEEEECSSSEEEEETTTTEEEEEEHHHHHHHHHHHT--CSEEEE
T ss_pred Hhh----------CcHHHHH---HHHHcCCCcEEEEEEeecCCCcEEEEEeCCeecCCCCHHHHHHHHHhCC--CCEEEE
Confidence 321 1111122 2233342 222221 2211 21 1123344456666665 677777
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHH
Q 016599 270 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDAD 349 (386)
Q Consensus 270 ~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~ 349 (386)
+...| .++. ..++.+.+.+ .+... +..+-..+| ++- .+.-...+.+||+.++.|..+ .....+.++.
T Consensus 174 ~~~~~-~g~~----~~~~~~~i~~----l~~~~-~~pvia~GG-i~~-~~~~~~~~~~Ga~~v~vgsal-~~~~~~~~~~ 240 (253)
T 1h5y_A 174 TSIDR-DGTG----LGYDVELIRR----VADSV-RIPVIASGG-AGR-VEHFYEAAAAGADAVLAASLF-HFRVLSIAQV 240 (253)
T ss_dssp EETTT-TTTC----SCCCHHHHHH----HHHHC-SSCEEEESC-CCS-HHHHHHHHHTTCSEEEESHHH-HTTSSCHHHH
T ss_pred ecccC-CCCc----CcCCHHHHHH----HHHhc-CCCEEEeCC-CCC-HHHHHHHHHcCCcHHHHHHHH-HcCCCCHHHH
Confidence 65433 1222 1123333222 22222 222223332 221 122244567899999988744 3444678999
Q ss_pred HHHHHHcCCCc
Q 016599 350 QLMFKVLGLTP 360 (386)
Q Consensus 350 ~~~i~~~G~~p 360 (386)
.+++++.||.+
T Consensus 241 ~~~l~~~g~~~ 251 (253)
T 1h5y_A 241 KRYLKERGVEV 251 (253)
T ss_dssp HHHHHHTTCBC
T ss_pred HHHHHHcCCCC
Confidence 99999999864
No 31
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=95.71 E-value=0.18 Score=45.98 Aligned_cols=97 Identities=18% Similarity=0.205 Sum_probs=59.9
Q ss_pred eeEEEEeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCC----CChhhHHH
Q 016599 85 EVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQ 160 (386)
Q Consensus 85 ~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~----ge~~~~~~ 160 (386)
+..+.+++|+ |+- +|+. + .+..+++++++.+++..+.|.+-+-+.+..+-++ .+...+++
T Consensus 5 ~~~imgilN~-TpD--------SFsd----g---g~~~~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~R 68 (280)
T 1eye_A 5 PVQVMGVLNV-TDD--------SFSD----G---GCYLDLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSR 68 (280)
T ss_dssp CCEEEEEEEC-SCC--------TTCS----S---CCCCSHHHHHHHHHHHHHTTCSEEEEECC--------------HHH
T ss_pred CcEEEEEEeC-CCC--------CcCC----C---cccCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHH
Confidence 3456677887 543 3332 1 1236899999999999999998887765222121 22345677
Q ss_pred HHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 161 ILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 161 l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+...++.+++.++.+++ .....+.++.-.++|.+.|+
T Consensus 69 v~pvi~~l~~~~~piSI--DT~~~~va~aAl~aGa~iIN 105 (280)
T 1eye_A 69 VIPVVKELAAQGITVSI--DTMRADVARAALQNGAQMVN 105 (280)
T ss_dssp HHHHHHHHHHTTCCEEE--ECSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHhhcCCCEEEE--eCCCHHHHHHHHHcCCCEEE
Confidence 88888888754555443 34567777777777777665
No 32
>3ovp_A Ribulose-phosphate 3-epimerase; iron binding, isomerase; HET: XPE; 1.70A {Homo sapiens} SCOP: c.1.2.0 PDB: 3ovq_A* 3ovr_A* 3qc3_A
Probab=95.64 E-value=0.15 Score=45.13 Aligned_cols=193 Identities=16% Similarity=0.169 Sum_probs=101.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE-ecccC----CCCCChhhHHHHHHHHHHH--hhcCcEEEEecCCCCHHHHHHHHHhcc
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCM-GAAWR----DTIGRKTNFNQILEYVKDI--RDMGMEVCCTLGMLEKHQAIELKKAGL 195 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l-~~g~~----~~~ge~~~~~~l~~~i~~i--k~~g~~i~~t~g~l~~e~l~~Lk~aG~ 195 (386)
+...+.++++.+.+.|++-+++ ++.+. .+.| ..+.+.++.. .+..+.+..-.. -....++.+.++|+
T Consensus 15 D~~~l~~~i~~l~~~g~d~~h~DVmDg~Fvpn~~~G-----~~~v~~ir~~~~~~~~~dvhLmv~-~p~~~i~~~~~aGa 88 (228)
T 3ovp_A 15 DLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFG-----HPVVESLRKQLGQDPFFDMHMMVS-KPEQWVKPMAVAGA 88 (228)
T ss_dssp CGGGHHHHHHHHHHTTCSCEEEEEEBSSSSSCBCBC-----HHHHHHHHHHHCSSSCEEEEEECS-CGGGGHHHHHHHTC
T ss_pred CchhHHHHHHHHHHcCCCEEEEEecCCCcCcccccC-----HHHHHHHHHhhCCCCcEEEEEEeC-CHHHHHHHHHHcCC
Confidence 3444556666677788876655 33222 1222 2344444444 222233322211 12457889999999
Q ss_pred CeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeec
Q 016599 196 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 275 (386)
Q Consensus 196 ~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~ 275 (386)
|.+.+..|+.+ . ..+.++.+++.|+.+...+- .+...+.+...+ .. ++.+-+....
T Consensus 89 d~itvH~Ea~~----------~---~~~~i~~i~~~G~k~gval~--p~t~~e~l~~~l----~~---~D~Vl~msv~-- 144 (228)
T 3ovp_A 89 NQYTFHLEATE----------N---PGALIKDIRENGMKVGLAIK--PGTSVEYLAPWA----NQ---IDMALVMTVE-- 144 (228)
T ss_dssp SEEEEEGGGCS----------C---HHHHHHHHHHTTCEEEEEEC--TTSCGGGTGGGG----GG---CSEEEEESSC--
T ss_pred CEEEEccCCch----------h---HHHHHHHHHHcCCCEEEEEc--CCCCHHHHHHHh----cc---CCeEEEeeec--
Confidence 99999776631 2 23667778889987655432 233333322222 22 4555554443
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHH
Q 016599 276 KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK 354 (386)
Q Consensus 276 ~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~ 354 (386)
||.. .+.. .+. .+..+...|.+.++..+.+.+|- +++.-..+..+|||.++.|. .... ..++.+..+.++
T Consensus 145 pGf~--Gq~f-~~~-~l~ki~~lr~~~~~~~I~VdGGI---~~~t~~~~~~aGAd~~VvGs-aIf~-a~dp~~~~~~l~ 214 (228)
T 3ovp_A 145 PGFG--GQKF-MED-MMPKVHWLRTQFPSLDIEVDGGV---GPDTVHKCAEAGANMIVSGS-AIMR-SEDPRSVINLLR 214 (228)
T ss_dssp TTTC--SCCC-CGG-GHHHHHHHHHHCTTCEEEEESSC---STTTHHHHHHHTCCEEEESH-HHHT-CSCHHHHHHHHH
T ss_pred CCCC--Cccc-CHH-HHHHHHHHHHhcCCCCEEEeCCc---CHHHHHHHHHcCCCEEEEeH-HHhC-CCCHHHHHHHHH
Confidence 3442 2221 111 12334455556665556666542 33444667889999999886 3332 234555555444
No 33
>3ctl_A D-allulose-6-phosphate 3-epimerase; D-glucitol 6-phosphate, (beta/alpha)8 barrel, carbohydrate metabolism, isomerase; HET: S6P; 2.20A {Escherichia coli} PDB: 3ct7_A*
Probab=95.51 E-value=0.45 Score=42.04 Aligned_cols=193 Identities=11% Similarity=0.105 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHcCCcEEEE-ecccCCCCCChhhHHHHHHHHHHHhhc-Cc--EEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 125 DAVMQAAQKAKEAGSTRFCM-GAAWRDTIGRKTNFNQILEYVKDIRDM-GM--EVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l-~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~--~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
-.+.++++.+ +.|++.+++ +..++.. | ++..-...++.+++. .. .+..-.- -....++.+.++|.|.+.+
T Consensus 13 ~~l~~~i~~~-~~gad~lHvDvmDG~fv---p-n~t~G~~~v~~lr~~~~~~~dvhLmv~-dp~~~i~~~~~aGAd~itv 86 (231)
T 3ctl_A 13 LKFKEQIEFI-DSHADYFHIDIMDGHFV---P-NLTLSPFFVSQVKKLATKPLDCHLMVT-RPQDYIAQLARAGADFITL 86 (231)
T ss_dssp GGHHHHHHHH-HTTCSCEEEEEECSSSS---S-CCCBCHHHHHHHHTTCCSCEEEEEESS-CGGGTHHHHHHHTCSEEEE
T ss_pred hhHHHHHHHH-HcCCCEEEEEEEeCccC---c-cchhcHHHHHHHHhccCCcEEEEEEec-CHHHHHHHHHHcCCCEEEE
Confidence 3445556666 778776543 1122210 1 111122355555543 23 3322111 1244689999999999998
Q ss_pred ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCC
Q 016599 201 NLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL 280 (386)
Q Consensus 201 ~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l 280 (386)
..|+. ..+. .+.++.+++.|+++...+ ..+...+.+...+ . .++.+-+....| |..-
T Consensus 87 h~Ea~---------~~~~---~~~i~~i~~~G~k~gv~l--np~tp~~~~~~~l----~---~~D~VlvmsV~p--Gfgg 143 (231)
T 3ctl_A 87 HPETI---------NGQA---FRLIDEIRRHDMKVGLIL--NPETPVEAMKYYI----H---KADKITVMTVDP--GFAG 143 (231)
T ss_dssp CGGGC---------TTTH---HHHHHHHHHTTCEEEEEE--CTTCCGGGGTTTG----G---GCSEEEEESSCT--TCSS
T ss_pred CcccC---------CccH---HHHHHHHHHcCCeEEEEE--ECCCcHHHHHHHH----h---cCCEEEEeeecc--CcCC
Confidence 77662 0122 366788889998866644 2333322222222 2 156666666555 4332
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCC----CcceeecCcccccChhHHHhhhhcCccccccC-CccccCCCCC-hhHHHHHHH
Q 016599 281 QDQKPVEIWEMIRMIATARIVMP----KAMVRLSAGRVRFSMPEQALCFLAGANSIFTG-EKLLTTPNND-FDADQLMFK 354 (386)
Q Consensus 281 ~~~~~~s~~e~~~~~a~~R~~lp----~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g-~~~~t~~~~~-~~~~~~~i~ 354 (386)
+...+ +..+ .+...|.+.+ +..+.+.+| +..+.......+|||.++.| ..+... .+ +.+.++.++
T Consensus 144 Q~f~~-~~l~---kI~~lr~~~~~~~~~~~I~VdGG---I~~~~~~~~~~aGAd~~V~G~saif~~--~d~~~~~~~~l~ 214 (231)
T 3ctl_A 144 QPFIP-EMLD---KLAELKAWREREGLEYEIEVDGS---CNQATYEKLMAAGADVFIVGTSGLFNH--AENIDEAWRIMT 214 (231)
T ss_dssp CCCCT-THHH---HHHHHHHHHHHHTCCCEEEEESC---CSTTTHHHHHHHTCCEEEECTTTTGGG--CSSHHHHHHHHH
T ss_pred ccccH-HHHH---HHHHHHHHHhccCCCceEEEECC---cCHHHHHHHHHcCCCEEEEccHHHhCC--CCcHHHHHHHHH
Confidence 12222 2222 2233333322 333445543 33344466788999999999 643322 23 555555554
Q ss_pred H
Q 016599 355 V 355 (386)
Q Consensus 355 ~ 355 (386)
+
T Consensus 215 ~ 215 (231)
T 3ctl_A 215 A 215 (231)
T ss_dssp H
T ss_pred H
Confidence 4
No 34
>1x7f_A Outer surface protein; structural genomics, unknown function, MCSG, PSI, midwest center for struct genomics; 2.30A {Bacillus cereus atcc 14579} SCOP: b.62.1.2 c.1.8.12
Probab=95.49 E-value=0.34 Score=46.00 Aligned_cols=147 Identities=14% Similarity=0.048 Sum_probs=83.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC-hhhHHHHHHHHHHHhhcCcEEEE--ecCCC-----CHHHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR-KTNFNQILEYVKDIRDMGMEVCC--TLGML-----EKHQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge-~~~~~~l~~~i~~ik~~g~~i~~--t~g~l-----~~e~l~~Lk~a 193 (386)
-+.++..+.++.+.+.|+++|+.+- ..+.+. ....+.+.++++.+++.|+++.+ ++..+ +.+.++.|++.
T Consensus 38 ~~~~~~~~Yi~~a~~~Gf~~IFTSL--~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DVsp~~~~~Lg~s~~dl~~f~~l 115 (385)
T 1x7f_A 38 STKEKDMAYISAAARHGFSRIFTCL--LSVNRPKEEIVAEFKEIINHAKDNNMEVILDVAPAVFDQLGISYSDLSFFAEL 115 (385)
T ss_dssp SCHHHHHHHHHHHHTTTEEEEEEEE--CCC--------HHHHHHHHHHHHTTCEEEEEECTTCC------CCCTHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEccC--CccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHc
Confidence 3677888999999999999885432 111122 24567888888989999999643 44443 33678899999
Q ss_pred ccCeeecc--cCchHHHHhhhCCCCCHHHHHHHHHHHH-HcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCC-eEee
Q 016599 194 GLTAYNHN--LDTSREFYSKIITTRSYDERLETLKHVR-EAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPE-SVPI 269 (386)
Q Consensus 194 G~~~v~i~--le~~~~~~~~i~~~~s~~~~l~~i~~a~-~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~-~v~~ 269 (386)
|++.+-+. +..- + ..+..+ ..|+++..+.-. +.+++..+ .+.+.+.+ ....
T Consensus 116 Gi~gLRLD~Gf~~~-e----------------ia~ls~n~~glkIeLNASt----~~~~l~~l----~~~~~n~~~l~ac 170 (385)
T 1x7f_A 116 GADGIRLDVGFDGL-T----------------EAKMTNNPYGLKIELNVSN----DIAYLENI----LSHQANKSALIGC 170 (385)
T ss_dssp TCSEEEESSCCSSH-H----------------HHHHTTCTTCCEEEEETTS----CSSHHHHH----TTSSCCGGGEEEE
T ss_pred CCCEEEEcCCCCHH-H----------------HHHHhcCCCCCEEEEeCcC----CHHHHHHH----HHcCCChHHeEEe
Confidence 99988763 3221 1 111111 235655444322 22333333 33332222 3467
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 016599 270 NALLAVKGTPLQDQKPVEIWEMIRMIATARIV 301 (386)
Q Consensus 270 ~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~ 301 (386)
+.|.|.|.|-+ +.+.+.+.-+..+.+
T Consensus 171 HNFYPr~~TGL------s~~~f~~~n~~~k~~ 196 (385)
T 1x7f_A 171 HNFYPQKFTGL------PYDYFIRCSERFKKH 196 (385)
T ss_dssp CCCBCSTTCSB------CHHHHHHHHHHHHHT
T ss_pred eccCCCCCCCC------CHHHHHHHHHHHHHC
Confidence 77878776654 556666655555543
No 35
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=95.28 E-value=1.6 Score=40.13 Aligned_cols=195 Identities=12% Similarity=0.108 Sum_probs=111.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHH--hccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKK--AGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~--aG~~~v 198 (386)
.+.+++++.+++..+.|.+-+-+.+|. ....+...+.++...++.+++ .++++++. ....+.++.-.+ +|.+-|
T Consensus 34 ~~~~~a~~~A~~~v~~GAdiIDIg~g~-~~v~~~eem~rvv~~i~~~~~~~~vpisID--T~~~~V~eaaL~~~~Ga~iI 110 (300)
T 3k13_A 34 KKYDEALSIARQQVEDGALVIDVNMDD-GLLDARTEMTTFLNLIMSEPEIARVPVMID--SSKWEVIEAGLKCLQGKSIV 110 (300)
T ss_dssp TCHHHHHHHHHHHHHTTCSEEEEECCC-TTSCHHHHHHHHHHHHHTCHHHHTSCEEEE--CSCHHHHHHHHHHCSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCC-CCCCHHHHHHHHHHHHHHhhhcCCCeEEEe--CCCHHHHHHHHHhcCCCCEE
Confidence 578999999999999999877776643 222333455667776665543 35565543 356788887777 687766
Q ss_pred e-cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEE--eecCCCHHHHHHHHHHH-----hcCCCCCCeEeee
Q 016599 199 N-HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI--IGLGEAEEDRVGLLHTL-----ATLPTHPESVPIN 270 (386)
Q Consensus 199 ~-i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i--~Glget~ed~~~~l~~l-----~~l~~~~~~v~~~ 270 (386)
+ ++.+.. -++..+.+..+.++|..+..-.+ -|...|.++..++.+.+ .+.|..++.+.+-
T Consensus 111 NdIs~~~~------------d~~~~~~~~l~a~~ga~vV~mh~d~~G~p~t~~~~~~i~~r~~~~~~~~~Gi~~~~IilD 178 (300)
T 3k13_A 111 NSISLKEG------------EEVFLEHARIIKQYGAATVVMAFDEKGQADTAARKIEVCERAYRLLVDKVGFNPHDIIFD 178 (300)
T ss_dssp EEECSTTC------------HHHHHHHHHHHHHHTCEEEEESEETTEECCSHHHHHHHHHHHHHHHHHHTCCCGGGEEEE
T ss_pred EeCCcccC------------ChhHHHHHHHHHHhCCeEEEEeeCCCCCCCCHHHHHHHHHHHHHHHHHHcCCCHHHEEEe
Confidence 5 333221 11223556778889987555334 46666777765555333 4455333445554
Q ss_pred eeeecCCCCCCCCCC---CCHHHHHHHHHHHHHhCCCcceeecCcccccChh------------HHHhhhhcCccccccC
Q 016599 271 ALLAVKGTPLQDQKP---VEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMP------------EQALCFLAGANSIFTG 335 (386)
Q Consensus 271 ~f~P~~gT~l~~~~~---~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~------------~~~~~l~~Gan~~~~g 335 (386)
+.+- ++..... -...++++.+...+..+|...+-+..++.+++-+ .-.++..+|.+..+.+
T Consensus 179 Pgig----~~gk~~~~~~~~~~~~l~~l~~lk~~lPg~pvl~G~SnkSfglp~~~~~R~~~n~~fl~~ai~~Gld~~Ivn 254 (300)
T 3k13_A 179 PNVL----AVATGIEEHNNYAVDFIEATGWIRKNLPGAHVSGGVSNLSFSFRGNNYIREAMHAVFLYHAIQQGMDMGIVN 254 (300)
T ss_dssp CCCC----CCSSSCGGGTTHHHHHHHHHHHHHHHSTTCEECCBGGGGGGGGTTCHHHHHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCCC----ccCCChHHhhHHHHHHHHHHHHHHHhCCCCCEEEEECcccccCCCCcchhHHHHHHHHHHHHHcCCCEEecC
Confidence 4331 2322111 1145566666666756766433333333333321 3355677888877544
No 36
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=95.22 E-value=0.94 Score=40.14 Aligned_cols=205 Identities=12% Similarity=0.062 Sum_probs=109.4
Q ss_pred HHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCch
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 205 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~ 205 (386)
..+.++.+.+.|++.+.+..... .+ .......+.++.+++ .++++.+..|..+.+.++.+.++|+|.+.++-...
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~--~~--~~~~~~~~~i~~i~~~~~ipvi~~ggI~~~~~~~~~~~~Gad~V~lg~~~l 107 (253)
T 1thf_D 32 PVELGKFYSEIGIDELVFLDITA--SV--EKRKTMLELVEKVAEQIDIPFTVGGGIHDFETASELILRGADKVSINTAAV 107 (253)
T ss_dssp HHHHHHHHHHTTCCEEEEEESSC--SS--SHHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHTTCSEEEESHHHH
T ss_pred HHHHHHHHHHcCCCEEEEECCch--hh--cCCcccHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCEEEEChHHH
Confidence 34455666778998887764211 11 133456777788874 47888888888889999999999999998865443
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHH--cCCeeeEe------EEeecCCCH---HHHHHHHHHHhcCCCCCCeEeeeeeee
Q 016599 206 REFYSKIITTRSYDERLETLKHVRE--AGINVCSG------GIIGLGEAE---EDRVGLLHTLATLPTHPESVPINALLA 274 (386)
Q Consensus 206 ~~~~~~i~~~~s~~~~l~~i~~a~~--~Gi~v~~~------~i~Glget~---ed~~~~l~~l~~l~~~~~~v~~~~f~P 274 (386)
+ +++...+.++.+.. ..+.+.+. .+.-.|... .+..+.++.+.+++ ++.+.++...+
T Consensus 108 ~----------~p~~~~~~~~~~g~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~~ 175 (253)
T 1thf_D 108 E----------NPSLITQIAQTFGSQAVVVAIDAKRVDGEFMVFTYSGKKNTGILLRDWVVEVEKRG--AGEILLTSIDR 175 (253)
T ss_dssp H----------CTHHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTT--CSEEEEEETTT
T ss_pred h----------ChHHHHHHHHHcCCCcEEEEEEEEccCCcEEEEECCCccccCCCHHHHHHHHHHCC--CCEEEEEeccC
Confidence 1 11222233333221 11222321 111123211 12445555556665 55555543222
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHH
Q 016599 275 VKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK 354 (386)
Q Consensus 275 ~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~ 354 (386)
. ++. ..++.+.+.++ +... +..+-..+| ++- ++.-...+.+||+.++.|..+. ....++++.++.++
T Consensus 176 ~-g~~----~g~~~~~~~~l----~~~~-~ipvia~GG-I~~-~~d~~~~~~~Gadgv~vGsal~-~~~~~~~~~~~~l~ 242 (253)
T 1thf_D 176 D-GTK----SGYDTEMIRFV----RPLT-TLPIIASGG-AGK-MEHFLEAFLAGADAALAASVFH-FREIDVRELKEYLK 242 (253)
T ss_dssp T-TSC----SCCCHHHHHHH----GGGC-CSCEEEESC-CCS-HHHHHHHHHTTCSEEEESHHHH-TTCSCHHHHHHHHH
T ss_pred C-CCC----CCCCHHHHHHH----HHhc-CCCEEEECC-CCC-HHHHHHHHHcCChHHHHHHHHH-cCCCCHHHHHHHHH
Confidence 1 221 22333332222 2222 211222222 221 1223445578999999887444 33337999999999
Q ss_pred HcCCCc
Q 016599 355 VLGLTP 360 (386)
Q Consensus 355 ~~G~~p 360 (386)
+.|+..
T Consensus 243 ~~g~~~ 248 (253)
T 1thf_D 243 KHGVNV 248 (253)
T ss_dssp HTTCCC
T ss_pred HcCCcc
Confidence 999643
No 37
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=95.17 E-value=0.34 Score=45.01 Aligned_cols=210 Identities=12% Similarity=0.075 Sum_probs=113.6
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCC--C-CCChhhH-HHHHHHHHHHhhcCcEEEEecCCCCHHHHHHH---HHh
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRD--T-IGRKTNF-NQILEYVKDIRDMGMEVCCTLGMLEKHQAIEL---KKA 193 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~--~-~ge~~~~-~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~L---k~a 193 (386)
.++.++.++.++.+.+.|++.+-++....+ + .+.+... .+.++.++..+...+...+.+....++.++.+ ..+
T Consensus 20 ~~~~~~k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 20 DFNSKIVDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp CCCHHHHHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTT
T ss_pred cCCHHHHHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhc
Confidence 389999999999999999998877632110 0 0001110 12223333322222223333322222334444 346
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeee
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALL 273 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~ 273 (386)
|++.+.+..+ .+..++..+.++.+++.|+.+...+.+.-+.+..+ ..+..+.++..+++.+.
T Consensus 100 Gvd~~ri~~~-----------~~nle~~~~~v~~ak~~G~~v~~~~~~~~~~~~~~--~~l~~~~~~~~G~~~i~----- 161 (320)
T 3dxi_A 100 LVDMIRIAID-----------PQNIDRAIVLAKAIKTMGFEVGFNVMYMSKWAEMN--GFLSKLKAIDKIADLFC----- 161 (320)
T ss_dssp TCSEEEEEEC-----------GGGHHHHHHHHHHHHTTTCEEEEEECCTTTGGGST--TSGGGGGGGTTTCSEEE-----
T ss_pred CCCEEEEEec-----------HHHHHHHHHHHHHHHHCCCEEEEEEEeCCCCCCHH--HHHHHHHHhhCCCCEEE-----
Confidence 8887776431 12478888999999999999877776532222111 22223332211133332
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---ccCCccccCCCCChhHH
Q 016599 274 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI---FTGEKLLTTPNNDFDAD 349 (386)
Q Consensus 274 P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~g~~~~t~~~~~~~~~ 349 (386)
.++|- ...++.+..+++...+..++- .+.+-+ .-.++.-.....++.+||+.+ +.|-. ..+.+.+.+++
T Consensus 162 -l~Dt~----G~~~P~~~~~lv~~l~~~~~~-~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG-~~~GN~~~E~l 234 (320)
T 3dxi_A 162 -MVDSF----GGITPKEVKNLLKEVRKYTHV-PVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMG-RGAGNLKMELL 234 (320)
T ss_dssp -EECTT----SCCCHHHHHHHHHHHHHHCCS-CEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCS-STTCBCBHHHH
T ss_pred -ECccc----CCCCHHHHHHHHHHHHHhCCC-eEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccC-CcccchhHHHH
Confidence 22332 224678888888888877752 232221 111222233466888999987 22210 12566889999
Q ss_pred HHHHHH
Q 016599 350 QLMFKV 355 (386)
Q Consensus 350 ~~~i~~ 355 (386)
+.+++.
T Consensus 235 v~~L~~ 240 (320)
T 3dxi_A 235 LTYLNK 240 (320)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999987
No 38
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=95.15 E-value=0.95 Score=49.54 Aligned_cols=213 Identities=8% Similarity=-0.011 Sum_probs=130.5
Q ss_pred CCHHHHHHHHHHHHHcC--CcEEEEecccCCC-----CCChhhHHHHHHHHHHHhhcCcEEEEe----cCC------CCH
Q 016599 122 MTKDAVMQAAQKAKEAG--STRFCMGAAWRDT-----IGRKTNFNQILEYVKDIRDMGMEVCCT----LGM------LEK 184 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G--~~~v~l~~g~~~~-----~ge~~~~~~l~~~i~~ik~~g~~i~~t----~g~------l~~ 184 (386)
++.++.++.++.+.+.| +..+-+.||...+ .+ ...++.+.++.+.+++.-+..... .|. ...
T Consensus 570 ~~~~dkl~ia~~L~~~gv~~~~iE~~gga~f~~~~~f~~-~~p~e~l~~~~~~~~~~~~~~l~R~~n~vg~~~~~~~~~~ 648 (1165)
T 2qf7_A 570 MRTYDIARIAGTYSHALPNLLSLECWGGATFDVSMRFLT-EDPWERLALIREGAPNLLLQMLLRGANGVGYTNYPDNVVK 648 (1165)
T ss_dssp CCHHHHHHHHHHHHHHCTTCSEEEEEETTHHHHHHHHHC-CCHHHHHHHHHHHCTTSEEEEEEETTTBTCSSCCCHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCCceEEEeCCCCccHHHHhhcC-CCHHHHHHHHHHHchhhHHHHHhccccccccccCCchhHH
Confidence 89999999999999985 5456554432211 01 123445555555554432333332 132 234
Q ss_pred HHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec--------CCCHHHHHHHHHH
Q 016599 185 HQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--------GEAEEDRVGLLHT 256 (386)
Q Consensus 185 e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl--------get~ed~~~~l~~ 256 (386)
+.++...++|++.+.+. .+. .+.+....+++.+++.|..+...+.+.. ..+.+.+.++++.
T Consensus 649 ~~i~~a~~~g~d~irif-~sl----------~~~~~~~~~i~~~~~~g~~v~~~i~~~~~~~d~~r~~~~~~~~~~~~~~ 717 (1165)
T 2qf7_A 649 YFVRQAAKGGIDLFRVF-DCL----------NWVENMRVSMDAIAEENKLCEAAICYTGDILNSARPKYDLKYYTNLAVE 717 (1165)
T ss_dssp HHHHHHHHHTCCEEEEE-CTT----------CCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTSGGGCHHHHHHHHHH
T ss_pred HHHHHHHhcCcCEEEEE-eeH----------HHHHHHHHHHHHHHhccceEEEEEEEeccccCCCCCCCCHHHHHHHHHH
Confidence 67888899999998773 221 2345666888999999988777665541 1467888999999
Q ss_pred HhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---
Q 016599 257 LATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI--- 332 (386)
Q Consensus 257 l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~--- 332 (386)
+.+.| ++.+.+ ++|- ....+.++.+++...+..+ +..+.+.+ .-.++.-.....++.+||+.+
T Consensus 718 ~~~~G--a~~i~l------~DT~----G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~t 784 (1165)
T 2qf7_A 718 LEKAG--AHIIAV------KDMA----GLLKPAAAKVLFKALREAT-GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDAA 784 (1165)
T ss_dssp HHHTT--CSEEEE------EETT----CCCCHHHHHHHHHHHHHHC-SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred HHHcC--CCEEEE------eCcc----CCcCHHHHHHHHHHHHHhc-CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEec
Confidence 99997 554433 2332 2346788888888777666 33333321 111222233467889999987
Q ss_pred ccCCccccCCCCChhHHHHHHHHcCCCc
Q 016599 333 FTGEKLLTTPNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 333 ~~g~~~~t~~~~~~~~~~~~i~~~G~~p 360 (386)
+.|-. ..+.+.+.++++.+++..|+.+
T Consensus 785 i~GlG-e~~Gn~~le~vv~~L~~~g~~t 811 (1165)
T 2qf7_A 785 MDALS-GNTSQPCLGSIVEALSGSERDP 811 (1165)
T ss_dssp CGGGC-SBTSCCBHHHHHHHHTTSTTCC
T ss_pred ccccC-CCccchhHHHHHHHHHhcCCCc
Confidence 22210 1256778899999998887653
No 39
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=95.15 E-value=0.55 Score=47.60 Aligned_cols=226 Identities=14% Similarity=0.050 Sum_probs=125.8
Q ss_pred CCCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh-hcCcEE--EEecCC-CCHHHHHHHHHhcc
Q 016599 120 KLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEV--CCTLGM-LEKHQAIELKKAGL 195 (386)
Q Consensus 120 ~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik-~~g~~i--~~t~g~-l~~e~l~~Lk~aG~ 195 (386)
..++.++-++.++.+.+.|++.|-.+. |.. .|..++.+..+++... ..+..+ ++.+-. .-+..++.++.+|.
T Consensus 88 ~~~s~eeKl~Ia~~L~~lGVd~IEaGf---P~a-sp~D~e~v~~i~~~~l~~~~~~i~aL~r~~~~did~a~eal~~a~~ 163 (644)
T 3hq1_A 88 DPMSPARKRRMFDLLVRMGYKEIEVGF---PSA-SQTDFDFVREIIEQGAIPDDVTIQVLTQCRPELIERTFQACSGAPR 163 (644)
T ss_dssp SCCCHHHHHHHHHHHHHHTCSEEEEEC---TTT-CHHHHHHHHHHHHTTCSCTTCEEEEEEESCHHHHHHHHHHHTTCSE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeC---CCC-ChhHHHHHHHHHhcCCCCCCeEEEEEecCCHhhHHHHHHHHhcCCC
Confidence 348999999999999999999886543 222 2444444433333211 013343 222211 11344556677888
Q ss_pred CeeecccCchH-HHHhhhCCCCCHHHHHH----HHHHHHHcCC---eeeEeEEeec----CCCHHHHHHHHHHHhcCCC-
Q 016599 196 TAYNHNLDTSR-EFYSKIITTRSYDERLE----TLKHVREAGI---NVCSGGIIGL----GEAEEDRVGLLHTLATLPT- 262 (386)
Q Consensus 196 ~~v~i~le~~~-~~~~~i~~~~s~~~~l~----~i~~a~~~Gi---~v~~~~i~Gl----get~ed~~~~l~~l~~l~~- 262 (386)
+.|.+.+-+.+ -...++ +.+.++.++ .++.+++.+- .+...+.|+. .-+.+-+.+.++.+.+.+.
T Consensus 164 ~~Vhif~stSd~h~~~~l--~~s~eevle~~~~~v~~a~~~~~~~~~~~~~v~fs~Edasrtd~dfl~ev~~aa~eaG~~ 241 (644)
T 3hq1_A 164 AIVHFYNSTSILQRRVVF--RANRAEVQAIATDGARKCVEQAAKYPGTQWRFEYSPESYTGTELEYAKQVCDAVGEVIAP 241 (644)
T ss_dssp EEEEEEEECCHHHHHHTT--CCCHHHHHHHHHHHHHHHHHHHHHSCSSEEEEEEEEETGGGSCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEEecCCHHHHHHHh--CCCHHHHHHHHHHHHHHHHHHhhhccCceEEEEEcCcccCCCCHHHHHHHHHHHHHhcCC
Confidence 88888777763 233333 456666655 4445555542 2233444543 2366777788888876531
Q ss_pred CCCe-EeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC---cceeecC-cccccChhHHHhhhhcCcccc---cc
Q 016599 263 HPES-VPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPK---AMVRLSA-GRVRFSMPEQALCFLAGANSI---FT 334 (386)
Q Consensus 263 ~~~~-v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~---~~i~i~~-g~~~~~~~~~~~~l~~Gan~~---~~ 334 (386)
.++. +.++ .|.|- ...++.++.+++...+..+|+ ..+.+.+ .-.++.-.....++.+||+.+ +.
T Consensus 242 Gad~~~~I~----LpDTv----G~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~AGA~~Vdgti~ 313 (644)
T 3hq1_A 242 TPERPIIFN----LPATV----EMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFAAGADRIEGCLF 313 (644)
T ss_dssp CSSSCEEEE----EEESS----CCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBGG
T ss_pred CCCceeEEE----ecCCC----cccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHHhCCCEEEecCC
Confidence 1332 1121 23442 235678888888877777764 2222211 111222223467889999987 22
Q ss_pred CCccccCCCCChhHHHHHHHHcCCCc
Q 016599 335 GEKLLTTPNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 335 g~~~~t~~~~~~~~~~~~i~~~G~~p 360 (386)
|- =..+++.+.++++.+++..|+.+
T Consensus 314 G~-GERaGNa~LE~lv~~L~~~Gi~t 338 (644)
T 3hq1_A 314 GN-GERTGNVCLVTLGLNLFSRGVDP 338 (644)
T ss_dssp GC-SSTTCBCBHHHHHHHHHTTTCCC
T ss_pred CC-CccccCccHHHHHHHHHhcccCC
Confidence 21 01256678888888888888764
No 40
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=94.82 E-value=2.1 Score=38.34 Aligned_cols=186 Identities=11% Similarity=0.123 Sum_probs=101.2
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCC-CCh-------------hhHHHHHHHHHHHhhc--CcEEEEecCCCC---
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRK-------------TNFNQILEYVKDIRDM--GMEVCCTLGMLE--- 183 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~-ge~-------------~~~~~l~~~i~~ik~~--g~~i~~t~g~l~--- 183 (386)
+.++.++.++.+.+.|++.+.++.-..++. ..| ...+.++++++++++. .+++..- +..+
T Consensus 29 ~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pi~~m-~y~n~v~ 107 (262)
T 2ekc_A 29 DYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFPDIPFLLM-TYYNPIF 107 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEE-CCHHHHH
T ss_pred ChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcCCCCEEEE-ecCcHHH
Confidence 457788888899999999887753221111 011 1224677888988854 5665331 2221
Q ss_pred ----HHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhc
Q 016599 184 ----KHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLAT 259 (386)
Q Consensus 184 ----~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~ 259 (386)
+..++.++++|++.+.+. .-.+++..+.++.+++.|+.+- .++....+.+.+........
T Consensus 108 ~~g~~~f~~~~~~aG~dgvii~-------------dl~~ee~~~~~~~~~~~gl~~i--~l~~p~t~~~rl~~ia~~a~- 171 (262)
T 2ekc_A 108 RIGLEKFCRLSREKGIDGFIVP-------------DLPPEEAEELKAVMKKYVLSFV--PLGAPTSTRKRIKLICEAAD- 171 (262)
T ss_dssp HHCHHHHHHHHHHTTCCEEECT-------------TCCHHHHHHHHHHHHHTTCEEC--CEECTTCCHHHHHHHHHHCS-
T ss_pred HhhHHHHHHHHHHcCCCEEEEC-------------CCCHHHHHHHHHHHHHcCCcEE--EEeCCCCCHHHHHHHHHhCC-
Confidence 577888999999987762 1234677778888999998641 22222334444444443321
Q ss_pred CCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCcc
Q 016599 260 LPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKL 338 (386)
Q Consensus 260 l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~ 338 (386)
..+........-|.. .+.+..+..++++..|... +..+-+. .++....+...+.+||+.++.|..+
T Consensus 172 -----gfiy~vs~~g~TG~~----~~~~~~~~~~~v~~vr~~~-~~pv~vG---~GI~t~e~~~~~~~gADgvIVGSai 237 (262)
T 2ekc_A 172 -----EMTYFVSVTGTTGAR----EKLPYERIKKKVEEYRELC-DKPVVVG---FGVSKKEHAREIGSFADGVVVGSAL 237 (262)
T ss_dssp -----SCEEEESSCC-------------CHHHHHHHHHHHHHC-CSCEEEE---SSCCSHHHHHHHHTTSSEEEECHHH
T ss_pred -----CCEEEEecCCccCCC----CCcCcccHHHHHHHHHhhc-CCCEEEe---CCCCCHHHHHHHHcCCCEEEECHHH
Confidence 122121211122222 1122134456666666655 2222222 2334233455688999999988643
No 41
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=94.71 E-value=0.82 Score=42.17 Aligned_cols=76 Identities=12% Similarity=0.215 Sum_probs=53.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC--------hhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR--------KTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge--------~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~ 192 (386)
.+++++++.+++..+.|.+-+-+++-.+-++.+ ....+++...|+.+++. ++.+++ .....+.++.-.+
T Consensus 46 ~~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~vpISI--DT~~~~Va~aAl~ 123 (314)
T 3tr9_A 46 LDLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFPQLISV--DTSRPRVMREAVN 123 (314)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCCSEEEE--ECSCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCCCeEEE--eCCCHHHHHHHHH
Confidence 689999999999999999877776533333222 23445677788887753 555544 4467888888888
Q ss_pred hccCeee
Q 016599 193 AGLTAYN 199 (386)
Q Consensus 193 aG~~~v~ 199 (386)
+|.+.|+
T Consensus 124 aGa~iIN 130 (314)
T 3tr9_A 124 TGADMIN 130 (314)
T ss_dssp HTCCEEE
T ss_pred cCCCEEE
Confidence 8888776
No 42
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=94.52 E-value=1.9 Score=38.96 Aligned_cols=172 Identities=12% Similarity=0.072 Sum_probs=101.1
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHHhccCeeecccCchH
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSR 206 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~ 206 (386)
.+.++.+.+.|...+.+.+......|. .+++ +.++ ..++++....+..++.++.+.+.+|.|.|.+....+
T Consensus 82 ~~~A~~y~~~GA~~IsVltd~~~f~Gs---~~~L----~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L- 153 (272)
T 3tsm_A 82 PALAKAYEEGGAACLSVLTDTPSFQGA---PEFL----TAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASV- 153 (272)
T ss_dssp HHHHHHHHHTTCSEEEEECCSTTTCCC---HHHH----HHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS-
T ss_pred HHHHHHHHHCCCCEEEEeccccccCCC---HHHH----HHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEccccc-
Confidence 444566677899888776532222232 2322 3444 346777766677888899999999999999865433
Q ss_pred HHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCC
Q 016599 207 EFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPV 286 (386)
Q Consensus 207 ~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~ 286 (386)
+.++..+.++.+++.|+.+-+.+ .|.+|+ +.+.+++ ++.++++.-.. +.+ .+
T Consensus 154 ----------~~~~l~~l~~~a~~lGl~~lvev-----h~~eEl----~~A~~~g--a~iIGinnr~l---~t~----~~ 205 (272)
T 3tsm_A 154 ----------DDDLAKELEDTAFALGMDALIEV-----HDEAEM----ERALKLS--SRLLGVNNRNL---RSF----EV 205 (272)
T ss_dssp ----------CHHHHHHHHHHHHHTTCEEEEEE-----CSHHHH----HHHTTSC--CSEEEEECBCT---TTC----CB
T ss_pred ----------CHHHHHHHHHHHHHcCCeEEEEe-----CCHHHH----HHHHhcC--CCEEEECCCCC---ccC----CC
Confidence 23445566778888998633222 366664 3444675 78888875321 111 23
Q ss_pred CHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCcccc
Q 016599 287 EIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLT 340 (386)
Q Consensus 287 s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t 340 (386)
+.+...++. ..+|...+-++.+-+. .++.......+||+.++.|+.+..
T Consensus 206 dl~~~~~L~----~~ip~~~~vIaesGI~-t~edv~~l~~~Ga~gvLVG~almr 254 (272)
T 3tsm_A 206 NLAVSERLA----KMAPSDRLLVGESGIF-THEDCLRLEKSGIGTFLIGESLMR 254 (272)
T ss_dssp CTHHHHHHH----HHSCTTSEEEEESSCC-SHHHHHHHHTTTCCEEEECHHHHT
T ss_pred ChHHHHHHH----HhCCCCCcEEEECCCC-CHHHHHHHHHcCCCEEEEcHHHcC
Confidence 334333333 2345433444432232 234345667889999999985543
No 43
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=94.45 E-value=0.57 Score=42.91 Aligned_cols=76 Identities=16% Similarity=0.201 Sum_probs=46.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCC----CChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCe
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTA 197 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~----ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~ 197 (386)
.+.+.+++.+++..+.|.+-+-+++-.+-++ .+....+++...|+.+++.++.+++ .....+.++.-.++|.+.
T Consensus 49 ~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~vpiSI--DT~~~~Va~aAl~aGa~i 126 (294)
T 2dqw_A 49 LDPERALERAREMVAEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGVPVSV--DTRKPEVAEEALKLGAHL 126 (294)
T ss_dssp ----CCHHHHHHHHHHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCSCEEE--ECSCHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCCeEEE--ECCCHHHHHHHHHhCCCE
Confidence 6788999999999999998877766222221 2235667888888888754555443 334566666666667665
Q ss_pred ee
Q 016599 198 YN 199 (386)
Q Consensus 198 v~ 199 (386)
|+
T Consensus 127 IN 128 (294)
T 2dqw_A 127 LN 128 (294)
T ss_dssp EE
T ss_pred EE
Confidence 54
No 44
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=94.38 E-value=0.72 Score=42.25 Aligned_cols=97 Identities=13% Similarity=0.205 Sum_probs=61.4
Q ss_pred eeEEEEeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCC----CChhhHHH
Q 016599 85 EVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQ 160 (386)
Q Consensus 85 ~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~----ge~~~~~~ 160 (386)
+..+.+++|+ |+- +|+. + .+..+.+.+++.+++..+.|.+-+-+++-.+-++ .+...+++
T Consensus 22 ~~~iMgilNv-TPD--------SFsd----g---g~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~R 85 (294)
T 2y5s_A 22 RPLVMGILNA-TPD--------SFSD----G---GRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELAR 85 (294)
T ss_dssp SCEEEEEEEC-CC-------------------------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHH
T ss_pred CceEEEEEeC-CCC--------CCCC----C---CCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHH
Confidence 3456778887 543 3331 1 1236789999999999999998887766222222 22355677
Q ss_pred HHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 161 ILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 161 l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+...|+.+++.++.+++ .....+.++.-.++|.+-|+
T Consensus 86 v~pvi~~l~~~~vpiSI--DT~~~~Va~aAl~aGa~iIN 122 (294)
T 2y5s_A 86 VIPLVEALRPLNVPLSI--DTYKPAVMRAALAAGADLIN 122 (294)
T ss_dssp HHHHHHHHGGGCSCEEE--ECCCHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHHhhCCCeEEE--ECCCHHHHHHHHHcCCCEEE
Confidence 88888888755555544 34668888888888887776
No 45
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=94.33 E-value=1.5 Score=39.41 Aligned_cols=76 Identities=13% Similarity=0.208 Sum_probs=54.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC----hhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCe
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR----KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTA 197 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge----~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~ 197 (386)
.+.+.+++.++++.+.|++-+-++|-.+-|+.+ ...++++...|+.+++.++.++ ..+...+.++.-.++|++.
T Consensus 27 ~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~l~~~~v~iS--IDT~~~~Va~~al~aGa~i 104 (270)
T 4hb7_A 27 NNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEAIVGFDVKIS--VDTFRSEVAEACLKLGVDM 104 (270)
T ss_dssp CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHHHTTSSSEEE--EECSCHHHHHHHHHHTCCE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHHhhcCCCeEE--EECCCHHHHHHHHHhccce
Confidence 688999999999999999877776543333322 2445678888888876555543 3456788888888888887
Q ss_pred ee
Q 016599 198 YN 199 (386)
Q Consensus 198 v~ 199 (386)
|+
T Consensus 105 IN 106 (270)
T 4hb7_A 105 IN 106 (270)
T ss_dssp EE
T ss_pred ec
Confidence 77
No 46
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=94.16 E-value=1.6 Score=41.25 Aligned_cols=77 Identities=9% Similarity=0.025 Sum_probs=52.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh-hhHHHHHHHHHHHhhcCcEEEEe--cCC-----CCHHHHHHHHHhc
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDMGMEVCCT--LGM-----LEKHQAIELKKAG 194 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~-~~~~~l~~~i~~ik~~g~~i~~t--~g~-----l~~e~l~~Lk~aG 194 (386)
+.++..+.++.+.+.|+++|+..- ..+.+++ ...+.+.++++.+++.|+++.+. +.. .+.+.++.|++.|
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL--~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DIsp~~l~~Lg~s~~dl~~~~~lG 92 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSL--HIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDISGEALKRAGFSFDELEPLIELG 92 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEE--CCC-----CHHHHHHHHHHHHHHHTCEEEEEECHHHHHTTTCBTTBCHHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEccC--CccCCChHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHcCCCHHHHHHHHHcC
Confidence 456777889999999999886432 2222222 45678888999999999996543 211 2456677888999
Q ss_pred cCeeecc
Q 016599 195 LTAYNHN 201 (386)
Q Consensus 195 ~~~v~i~ 201 (386)
++.+-+.
T Consensus 93 i~glRLD 99 (372)
T 2p0o_A 93 VTGLRMD 99 (372)
T ss_dssp CCEEEEC
T ss_pred CCEEEEc
Confidence 9887763
No 47
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=94.01 E-value=0.77 Score=41.81 Aligned_cols=137 Identities=15% Similarity=0.131 Sum_probs=80.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC----hhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccC
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR----KTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLT 196 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge----~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~ 196 (386)
.+++++++.+++..+.|.+-+-+.+..+-++.+ ....+.+...++.+++. ++.+++ .....+.++.-.++|.+
T Consensus 35 ~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~piSI--DT~~~~va~aAl~aGa~ 112 (282)
T 1aj0_A 35 NSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEVWISV--DTSKPEVIRESAKVGAH 112 (282)
T ss_dssp THHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCCEEEE--ECCCHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCCeEEE--eCCCHHHHHHHHHcCCC
Confidence 688999999999999999888787633322211 24556778888888743 666544 33557777777777777
Q ss_pred eee-cccCchHHHHhh---hC--------C--CCC--------------HHHHHHHHHHHHHcCCe---eeEeEEeecCC
Q 016599 197 AYN-HNLDTSREFYSK---II--------T--TRS--------------YDERLETLKHVREAGIN---VCSGGIIGLGE 245 (386)
Q Consensus 197 ~v~-i~le~~~~~~~~---i~--------~--~~s--------------~~~~l~~i~~a~~~Gi~---v~~~~i~Glge 245 (386)
.|+ ++-...++.++. .. + +.+ .+...+.++.+.++|+. +-.+--+|++.
T Consensus 113 iINdvsg~~d~~~~~~~a~~~~~vVlmh~~G~p~tm~~~~~y~d~~~ev~~~l~~~i~~a~~~Gi~~~~IilDPg~gf~k 192 (282)
T 1aj0_A 113 IINDIRSLSEPGALEAAAETGLPVCLMHMQGNPKTMQEAPKYDDVFAEVNRYFIEQIARCEQAGIAKEKLLLDPGFGFGK 192 (282)
T ss_dssp EEEETTTTCSTTHHHHHHHHTCCEEEECCSSCTTCCSCCCCCSCHHHHHHHHHHHHHHHHHHTTCCGGGEEEECCTTSSC
T ss_pred EEEECCCCCCHHHHHHHHHhCCeEEEEccCCCCccccccCccchHHHHHHHHHHHHHHHHHHcCCChhhEEEeCCCCccc
Confidence 665 222111111111 00 0 011 34445566667777775 56665556666
Q ss_pred CHHHHHHHHHHHhcC
Q 016599 246 AEEDRVGLLHTLATL 260 (386)
Q Consensus 246 t~ed~~~~l~~l~~l 260 (386)
+.++-.++++.+..+
T Consensus 193 ~~~~n~~ll~~l~~~ 207 (282)
T 1aj0_A 193 NLSHNYSLLARLAEF 207 (282)
T ss_dssp CHHHHHHHHHTGGGG
T ss_pred CHHHHHHHHHHHHHH
Confidence 666666666555544
No 48
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=93.91 E-value=2.4 Score=38.17 Aligned_cols=185 Identities=13% Similarity=0.092 Sum_probs=98.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCC-CChh-------------hHHHHHHHHHHHhhc--CcEEEEe---cCC--
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKT-------------NFNQILEYVKDIRDM--GMEVCCT---LGM-- 181 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~-ge~~-------------~~~~l~~~i~~ik~~--g~~i~~t---~g~-- 181 (386)
+++...+.++.+.+.|++-+.++--..+|. ..|. ..+.++++++++++. .+++..- |-.
T Consensus 30 ~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~ 109 (267)
T 3vnd_A 30 SPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCFDIITKVRAQHPDMPIGLLLYANLVFA 109 (267)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTCCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 567788888888889998877753221111 1121 123678899998853 4554221 111
Q ss_pred -CCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 182 -LEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 182 -l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
-.+..++.++++|+|.+.+.- -.+++..+.++.+++.|+.. .+++...-+.+.+....+..
T Consensus 110 ~g~e~f~~~~~~aGvdgvii~D-------------lp~ee~~~~~~~~~~~gl~~--i~liaP~t~~eri~~i~~~~--- 171 (267)
T 3vnd_A 110 NGIDEFYTKAQAAGVDSVLIAD-------------VPVEESAPFSKAAKAHGIAP--IFIAPPNADADTLKMVSEQG--- 171 (267)
T ss_dssp HCHHHHHHHHHHHTCCEEEETT-------------SCGGGCHHHHHHHHHTTCEE--ECEECTTCCHHHHHHHHHHC---
T ss_pred hhHHHHHHHHHHcCCCEEEeCC-------------CCHhhHHHHHHHHHHcCCeE--EEEECCCCCHHHHHHHHHhC---
Confidence 137789999999999987731 12234456677889999874 22332333444333333222
Q ss_pred CCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHh-hhhcCccccccCCc
Q 016599 261 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQAL-CFLAGANSIFTGEK 337 (386)
Q Consensus 261 ~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~-~l~~Gan~~~~g~~ 337 (386)
..++......+.-|.. .....+ ....+...|...+ +++..| .++....+.. .+.+||+.++.|..
T Consensus 172 ---~gfvY~vS~~GvTG~~--~~~~~~---~~~~v~~vr~~~~---~pv~vG-fGI~~~e~~~~~~~~gADgvVVGSa 237 (267)
T 3vnd_A 172 ---EGYTYLLSRAGVTGTE--SKAGEP---IENILTQLAEFNA---PPPLLG-FGIAEPEQVRAAIKAGAAGAISGSA 237 (267)
T ss_dssp ---CSCEEESCCCCCC----------C---HHHHHHHHHTTTC---CCEEEC-SSCCSHHHHHHHHHTTCSEEEECHH
T ss_pred ---CCcEEEEecCCCCCCc--cCCcHH---HHHHHHHHHHhcC---CCEEEE-CCcCCHHHHHHHHHcCCCEEEECHH
Confidence 2244444444433433 111122 3444555555432 122211 2343333444 78899999999863
No 49
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=93.48 E-value=1.4 Score=38.96 Aligned_cols=206 Identities=13% Similarity=0.067 Sum_probs=106.4
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCc
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 204 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~ 204 (386)
+..+.++.+.+.|++.+.+..... .+ ......++.++.+++ .++++....|..+.+.++.+.++|++.+.++-..
T Consensus 32 d~~~~a~~~~~~Gad~i~v~d~~~--~~--~~~~~~~~~i~~i~~~~~iPvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~~ 107 (252)
T 1ka9_F 32 DPVEAARAYDEAGADELVFLDISA--TH--EERAILLDVVARVAERVFIPLTVGGGVRSLEDARKLLLSGADKVSVNSAA 107 (252)
T ss_dssp CHHHHHHHHHHHTCSCEEEEECCS--ST--TCHHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHHHHTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCCc--cc--cCccccHHHHHHHHHhCCCCEEEECCcCCHHHHHHHHHcCCCEEEEChHH
Confidence 345555666677988887763211 11 123445677777774 4788888888889999999999999999886543
Q ss_pred hHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeE--------EeecCCCH---HHHHHHHHHHhcCCCCCCeEeeeeee
Q 016599 205 SREFYSKIITTRSYDERLETLKHVREAGINVCSGG--------IIGLGEAE---EDRVGLLHTLATLPTHPESVPINALL 273 (386)
Q Consensus 205 ~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~--------i~Glget~---ed~~~~l~~l~~l~~~~~~v~~~~f~ 273 (386)
+++ .+...+..+.+....+.+.+.+ +.-.|... .+..+.++.+.+++ +..+.++...
T Consensus 108 l~~----------p~~~~~~~~~~~~~~i~~~~~~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~ 175 (252)
T 1ka9_F 108 VRR----------PELIRELADHFGAQAVVLAIDARWRGDFPEVHVAGGRVPTGLHAVEWAVKGVELG--AGEILLTSMD 175 (252)
T ss_dssp HHC----------THHHHHHHHHHCGGGEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHHT--CCEEEEEETT
T ss_pred HhC----------cHHHHHHHHHcCCCcEEEEEEEecCCCCEEEEECCCccccCCcHHHHHHHHHHcC--CCEEEEeccc
Confidence 310 1112222222211112222222 11123211 12344445555555 5444443211
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHH
Q 016599 274 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 353 (386)
Q Consensus 274 P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i 353 (386)
..|+. ..++.+.+ ...+...+- .+ +..|-++-..+. ...+..||+.++.|..+. ....++++..+.+
T Consensus 176 -~~g~~----~g~~~~~i----~~l~~~~~i-pv-ia~GGI~~~~d~-~~~~~~Gadgv~vgsal~-~~~~~~~~~~~~l 242 (252)
T 1ka9_F 176 -RDGTK----EGYDLRLT----RMVAEAVGV-PV-IASGGAGRMEHF-LEAFQAGAEAALAASVFH-FGEIPIPKLKRYL 242 (252)
T ss_dssp -TTTTC----SCCCHHHH----HHHHHHCSS-CE-EEESCCCSHHHH-HHHHHTTCSEEEESHHHH-TTSSCHHHHHHHH
T ss_pred -CCCCc----CCCCHHHH----HHHHHHcCC-CE-EEeCCCCCHHHH-HHHHHCCCHHHHHHHHHH-cCCCCHHHHHHHH
Confidence 11221 22333332 222222221 11 222212211232 345567999998887433 3445899999999
Q ss_pred HHcCCCc
Q 016599 354 KVLGLTP 360 (386)
Q Consensus 354 ~~~G~~p 360 (386)
++.|...
T Consensus 243 ~~~~~~~ 249 (252)
T 1ka9_F 243 AEKGVHV 249 (252)
T ss_dssp HHTTCCB
T ss_pred HHCCCCc
Confidence 9999643
No 50
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=93.18 E-value=4.7 Score=36.39 Aligned_cols=186 Identities=15% Similarity=0.212 Sum_probs=105.3
Q ss_pred HHHHHHHHHHhhc--CcEEEE-----ecCCCCHHHHHHHHHhccCeeeccc------Cch-HHHHhhhCCCCCHHHHHHH
Q 016599 159 NQILEYVKDIRDM--GMEVCC-----TLGMLEKHQAIELKKAGLTAYNHNL------DTS-REFYSKIITTRSYDERLET 224 (386)
Q Consensus 159 ~~l~~~i~~ik~~--g~~i~~-----t~g~l~~e~l~~Lk~aG~~~v~i~l------e~~-~~~~~~i~~~~s~~~~l~~ 224 (386)
+..+++.+++-.. ++++.. .++......++.||++|+..+ ++. |+. ++.++. .+-++++-.+.
T Consensus 79 ~iv~e~~~evlp~v~~iPV~Agv~~~DP~~~~g~~Le~lk~~Gf~Gv-~N~ptvglidG~fr~~LEE--~gm~~~~eve~ 155 (286)
T 2p10_A 79 QIVVDMAREVLPVVRHTPVLAGVNGTDPFMVMSTFLRELKEIGFAGV-QNFPTVGLIDGLFRQNLEE--TGMSYAQEVEM 155 (286)
T ss_dssp HHHHHHHHHHGGGCSSSCEEEEECTTCTTCCHHHHHHHHHHHTCCEE-EECSCGGGCCHHHHHHHHH--TTCCHHHHHHH
T ss_pred HHHHHHHHhhhccCCCCCEEEEECCcCCCcCHHHHHHHHHHhCCceE-EECCCcccccchhhhhHhh--cCCCHHHHHHH
Confidence 4566666665422 445422 245567888999999998887 443 332 333332 35689999999
Q ss_pred HHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHH----HHHHHHHHHH
Q 016599 225 LKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWE----MIRMIATARI 300 (386)
Q Consensus 225 i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e----~~~~~a~~R~ 300 (386)
|+.+++.|+.+.. + -.|.++...+. +++ +|.+-+++=.-.. -.+......+.++ ..+++..++.
T Consensus 156 I~~A~~~gL~Ti~-~----v~~~eeA~amA----~ag--pDiI~~h~glT~g-glIG~~~avs~~~~~e~i~~i~~a~~~ 223 (286)
T 2p10_A 156 IAEAHKLDLLTTP-Y----VFSPEDAVAMA----KAG--ADILVCHMGLTTG-GAIGARSGKSMDDCVSLINECIEAART 223 (286)
T ss_dssp HHHHHHTTCEECC-E----ECSHHHHHHHH----HHT--CSEEEEECSCC----------CCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCeEEE-e----cCCHHHHHHHH----HcC--CCEEEECCCCCCC-CcccCCCcccHHHhHHHHHHHHHHHHH
Confidence 9999999995322 2 24777776654 443 6666554311011 1122223345544 4445667788
Q ss_pred hCCCcceeecCcccccChhHHHhhhhc--CccccccCCccccCC-CCChhHHHHHHHHcCCCc
Q 016599 301 VMPKAMVRLSAGRVRFSMPEQALCFLA--GANSIFTGEKLLTTP-NNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 301 ~lp~~~i~i~~g~~~~~~~~~~~~l~~--Gan~~~~g~~~~t~~-~~~~~~~~~~i~~~G~~p 360 (386)
..|+.++-..+|=+.- ++..+..+.. |++.++..+.+.... .....+..+-++...+.|
T Consensus 224 vnpdvivLc~gGpIst-peDv~~~l~~t~G~~G~~gASsier~p~e~ai~~~~~~fk~~~~~~ 285 (286)
T 2p10_A 224 IRDDIIILSHGGPIAN-PEDARFILDSCQGCHGFYGASSMERLPAEEAIRSQTLAFKAIRRQP 285 (286)
T ss_dssp HCSCCEEEEESTTCCS-HHHHHHHHHHCTTCCEEEESHHHHHHHHHHHHHHHHHHHHTCCCCC
T ss_pred hCCCcEEEecCCCCCC-HHHHHHHHhcCCCccEEEeehhhhcCCHHHHHHHHHHHHHhcccCC
Confidence 8888644333333332 3334566666 899987775443322 234455566666666665
No 51
>1tqj_A Ribulose-phosphate 3-epimerase; beta-alpha barrel epimerase, isomerase; 1.60A {Synechocystis SP} SCOP: c.1.2.2
Probab=93.17 E-value=0.55 Score=41.37 Aligned_cols=199 Identities=15% Similarity=0.105 Sum_probs=98.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEec-ccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecC-CCCHHHHHHHHHhccCeeec
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGA-AWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLG-MLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~-g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g-~l~~e~l~~Lk~aG~~~v~i 200 (386)
...+.+.++.+.+.|++-+.+.- .++.. | ....-.+.++.+++. ..++.+..= .-.++.++.+.++|+|.+.+
T Consensus 16 ~~~l~~~i~~~~~~Gad~ihldi~DG~fv---p-~~~~g~~~v~~lr~~~~~~~~vhlmv~dp~~~i~~~~~aGadgv~v 91 (230)
T 1tqj_A 16 FSRLGEEIKAVDEAGADWIHVDVMDGRFV---P-NITIGPLIVDAIRPLTKKTLDVHLMIVEPEKYVEDFAKAGADIISV 91 (230)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSSS---S-CBCBCHHHHHHHGGGCCSEEEEEEESSSGGGTHHHHHHHTCSEEEE
T ss_pred HhHHHHHHHHHHHcCCCEEEEEEEecCCC---c-chhhhHHHHHHHHhhcCCcEEEEEEccCHHHHHHHHHHcCCCEEEE
Confidence 34455566666778888765521 11110 0 111123666666653 333211110 11245789999999999999
Q ss_pred ccC--chHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCC
Q 016599 201 NLD--TSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGT 278 (386)
Q Consensus 201 ~le--~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT 278 (386)
..+ .. +...+.++.+++.|+.+...+ ... |..+.. +.+.. .++.+.+....|..+.
T Consensus 92 h~e~~~~-------------~~~~~~~~~i~~~g~~~gv~~--~p~-t~~e~~---~~~~~---~~D~v~~msv~pg~gg 149 (230)
T 1tqj_A 92 HVEHNAS-------------PHLHRTLCQIRELGKKAGAVL--NPS-TPLDFL---EYVLP---VCDLILIMSVNPGFGG 149 (230)
T ss_dssp ECSTTTC-------------TTHHHHHHHHHHTTCEEEEEE--CTT-CCGGGG---TTTGG---GCSEEEEESSCC----
T ss_pred Ccccccc-------------hhHHHHHHHHHHcCCcEEEEE--eCC-CcHHHH---HHHHh---cCCEEEEEEeccccCC
Confidence 876 42 122356677788898765543 222 333322 22222 2567777776664332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHH
Q 016599 279 PLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 355 (386)
Q Consensus 279 ~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~ 355 (386)
....+...+.+.++.+.....-.+..+.+.+| ++ .+.......+|||.++.|..+... .++++..+.+++
T Consensus 150 --q~~~~~~~~~i~~lr~~~~~~~~~~~I~v~GG-I~--~~~~~~~~~aGad~vvvGSai~~a--~d~~~~~~~l~~ 219 (230)
T 1tqj_A 150 --QSFIPEVLPKIRALRQMCDERGLDPWIEVDGG-LK--PNNTWQVLEAGANAIVAGSAVFNA--PNYAEAIAGVRN 219 (230)
T ss_dssp --CCCCGGGHHHHHHHHHHHHHHTCCCEEEEESS-CC--TTTTHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHHT
T ss_pred --ccCcHHHHHHHHHHHHHHHhcCCCCcEEEECC-cC--HHHHHHHHHcCCCEEEECHHHHCC--CCHHHHHHHHHH
Confidence 22222233333222222221111222333333 22 233345677899999888744322 356666666654
No 52
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=93.07 E-value=2.8 Score=37.87 Aligned_cols=129 Identities=12% Similarity=0.081 Sum_probs=82.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHh--ccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKA--GLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~a--G~~~v 198 (386)
.+.+.+++.+++..+.|.+-+-+.+.. ......+.+..+++.+++. ++.+++ .....+.++.-.++ |.+-|
T Consensus 31 ~~~~~a~~~a~~~v~~GAdiIDIg~~s----~~~eE~~rv~~vi~~l~~~~~~pisI--DT~~~~v~~aal~a~~Ga~iI 104 (271)
T 2yci_X 31 KDPRPIQEWARRQAEKGAHYLDVNTGP----TADDPVRVMEWLVKTIQEVVDLPCCL--DSTNPDAIEAGLKVHRGHAMI 104 (271)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECCS----CSSCHHHHHHHHHHHHHHHCCCCEEE--ECSCHHHHHHHHHHCCSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCc----CchhHHHHHHHHHHHHHHhCCCeEEE--eCCCHHHHHHHHHhCCCCCEE
Confidence 567999999999999999888776643 1234678888888888754 666554 34578999888888 98877
Q ss_pred e-cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEE--eecCCCHHH----HHHHHHHHhcCCCCCCeEeee
Q 016599 199 N-HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI--IGLGEAEED----RVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 199 ~-i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i--~Glget~ed----~~~~l~~l~~l~~~~~~v~~~ 270 (386)
+ ++.+ -+++-+.+..+.++|..+..--+ -|...|.++ +.+.++.+.+.|...+.+.+-
T Consensus 105 Ndvs~~--------------~d~~~~~~~~~a~~~~~vv~m~~d~~G~p~t~~~~~~~l~~~~~~a~~~Gi~~~~IilD 169 (271)
T 2yci_X 105 NSTSAD--------------QWKMDIFFPMAKKYEAAIIGLTMNEKGVPKDANDRSQLAMELVANADAHGIPMTELYID 169 (271)
T ss_dssp EEECSC--------------HHHHHHHHHHHHHHTCEEEEESCBTTBCCCSHHHHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred EECCCC--------------ccccHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEe
Confidence 6 4332 12223455667788886544333 344456444 445556666665322334443
No 53
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=92.89 E-value=5.9 Score=43.27 Aligned_cols=214 Identities=13% Similarity=0.018 Sum_probs=124.4
Q ss_pred CCHHHHHHHHHHHHHc--CCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcE--EEEe--c--CC------CCHH
Q 016599 122 MTKDAVMQAAQKAKEA--GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GME--VCCT--L--GM------LEKH 185 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~--G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~--i~~t--~--g~------l~~e 185 (386)
++.++.++.++.+.+. |+..+-..|+.....+-+...+.=.+.++.+++. +.. ..+. | |. +.++
T Consensus 552 ~~~~~kl~ia~~L~~~~~G~~~lE~~Gga~~e~~~~~~~e~~~e~l~~l~~~~~~~~~~~l~R~~n~vgy~~~pd~v~~~ 631 (1150)
T 3hbl_A 552 VRTKDMINIASKTADVFKDGFSLEMWGGATFDVAYNFLKENPWERLERLRKAIPNVLFQMLLRASNAVGYKNYPDNVIHK 631 (1150)
T ss_dssp CCHHHHHHHHHHHHHHTTTCSEEEEEETTHHHHHHHTSCCCHHHHHHHHHHHCCSSEEEEEEETTTBTCSSCCCHHHHHH
T ss_pred CCHHHHHHHHHHHHHhhCCCcEEeecCCceEEecccccCCCHHHHHHHHHHhCCCCeEEEEeccccccccccCCchhHHH
Confidence 8899999999998887 8888876554321101000001223344444432 222 3332 1 21 1355
Q ss_pred HHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEee---c------CCCHHHHHHHHHH
Q 016599 186 QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIG---L------GEAEEDRVGLLHT 256 (386)
Q Consensus 186 ~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~G---l------get~ed~~~~l~~ 256 (386)
.++...++|++.+.+..-. .........++.+++.|..+...+.+- + ..+.+.+.+.++.
T Consensus 632 ~v~~a~~~Gvd~irif~~~-----------sd~~~~~~~~~~~~e~g~~~~~~i~~~~~~~~pe~~~~~~~~~~~~~a~~ 700 (1150)
T 3hbl_A 632 FVQESAKAGIDVFRIFDSL-----------NWVDQMKVANEAVQEAGKISEGTICYTGDILNPERSNIYTLEYYVKLAKE 700 (1150)
T ss_dssp HHHHHHHTTCCEEEEECTT-----------CCGGGGHHHHHHHHHTTCEEEEEEECCSCTTCTTTCSSSSHHHHHHHHHH
T ss_pred HHHHHHhCCcCEEEEEeeC-----------CHHHHHHHHHHHHHHHhhheeEEEeecccccChhhcCCCCHHHHHHHHHH
Confidence 6788888999998874322 122233456777888897766666654 2 1457888999999
Q ss_pred HhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC-cccccChhHHHhhhhcCcccc---
Q 016599 257 LATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA-GRVRFSMPEQALCFLAGANSI--- 332 (386)
Q Consensus 257 l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~-g~~~~~~~~~~~~l~~Gan~~--- 332 (386)
+.+.| ++.+.+ ++|- ...++.+..+++...+..+ +..+.+.+ .-.++.-.....++.+||+.+
T Consensus 701 ~~~~G--a~~i~l------~Dt~----G~~~P~~~~~lv~~l~~~~-~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~a 767 (1150)
T 3hbl_A 701 LEREG--FHILAI------KDMA----GLLKPKAAYELIGELKSAV-DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDTA 767 (1150)
T ss_dssp HHHTT--CSEEEE------EETT----CCCCHHHHHHHHHHHHHHC-CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEEB
T ss_pred HHHcC--CCeeeE------cCcc----CCCCHHHHHHHHHHHHHhc-CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEEe
Confidence 99997 554433 2232 2346778888888777665 33333321 111222233467888999987
Q ss_pred ccCCccccCCCCChhHHHHHHHHcCCCc
Q 016599 333 FTGEKLLTTPNNDFDADQLMFKVLGLTP 360 (386)
Q Consensus 333 ~~g~~~~t~~~~~~~~~~~~i~~~G~~p 360 (386)
+.|-. ..+..++.++++.+++..|+.+
T Consensus 768 i~GlG-~~~gn~~lE~lv~~L~~~g~~t 794 (1150)
T 3hbl_A 768 VASMS-GLTSQPSANSLYYALNGFPRHL 794 (1150)
T ss_dssp CGGGC-SBTSCCBHHHHHHHTTTSSCCB
T ss_pred ccccC-CCCCCccHHHHHHHHHhcCCCc
Confidence 22210 1245568888888888877653
No 54
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=92.67 E-value=1.7 Score=39.81 Aligned_cols=76 Identities=12% Similarity=0.197 Sum_probs=51.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC----hhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccC
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR----KTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLT 196 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge----~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~ 196 (386)
.+.+++++.+++..+.|.+-+-+.+-.+-++.. ....+++...|+.+++ .++.+++. ....+.++.-.++|.+
T Consensus 60 ~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~vpiSID--T~~~~V~~aAl~aGa~ 137 (297)
T 1tx2_A 60 NEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKLPISID--TYKAEVAKQAIEAGAH 137 (297)
T ss_dssp HHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCSCEEEE--CSCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCceEEEe--CCCHHHHHHHHHcCCC
Confidence 578999999999999999888787533222211 2445667777788774 36665443 3567777777777877
Q ss_pred eee
Q 016599 197 AYN 199 (386)
Q Consensus 197 ~v~ 199 (386)
.|+
T Consensus 138 iIN 140 (297)
T 1tx2_A 138 IIN 140 (297)
T ss_dssp EEE
T ss_pred EEE
Confidence 775
No 55
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=92.55 E-value=3.1 Score=35.61 Aligned_cols=190 Identities=15% Similarity=0.076 Sum_probs=100.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCC-CHHH-HHHHHHhccCe
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGML-EKHQ-AIELKKAGLTA 197 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l-~~e~-l~~Lk~aG~~~ 197 (386)
.+.++.++.++.+. .|++-+-+ | -|.....-.+.++.+++. ++++..+.-.. ..+. ++.++++|++.
T Consensus 10 ~~~~~~~~~~~~~~-~~~diie~-G-------~p~~~~~g~~~i~~ir~~~~~~~i~~~~~~~~~~~~~~~~~~~~Gad~ 80 (211)
T 3f4w_A 10 LTLPEAMVFMDKVV-DDVDIIEV-G-------TPFLIREGVNAIKAIKEKYPHKEVLADAKIMDGGHFESQLLFDAGADY 80 (211)
T ss_dssp CCHHHHHHHHHHHG-GGCSEEEE-C-------HHHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHhh-cCccEEEe-C-------cHHHHhccHHHHHHHHHhCCCCEEEEEEEeccchHHHHHHHHhcCCCE
Confidence 46788888888774 46553322 2 132244445677777754 56654443221 2344 89999999999
Q ss_pred eecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCC
Q 016599 198 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKG 277 (386)
Q Consensus 198 v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~g 277 (386)
+.+..... .+...+.++.+++.|+.+...+ .+ .++. .+.++.+.+.+ .+.+.+++- ..|
T Consensus 81 v~v~~~~~------------~~~~~~~~~~~~~~g~~~~v~~-~~-~~t~---~~~~~~~~~~g--~d~i~v~~g--~~g 139 (211)
T 3f4w_A 81 VTVLGVTD------------VLTIQSCIRAAKEAGKQVVVDM-IC-VDDL---PARVRLLEEAG--ADMLAVHTG--TDQ 139 (211)
T ss_dssp EEEETTSC------------HHHHHHHHHHHHHHTCEEEEEC-TT-CSSH---HHHHHHHHHHT--CCEEEEECC--HHH
T ss_pred EEEeCCCC------------hhHHHHHHHHHHHcCCeEEEEe-cC-CCCH---HHHHHHHHHcC--CCEEEEcCC--Ccc
Confidence 98854332 2233466677888898754321 11 2333 33445555555 566654311 112
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHH
Q 016599 278 TPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 353 (386)
Q Consensus 278 T~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i 353 (386)
..+ .....+ .+...+...++..+-+.+| ++ ++.-...+.+||+.++.|..+... .++.+..+.+
T Consensus 140 ~~~---~~~~~~----~i~~l~~~~~~~~i~~~gG-I~--~~~~~~~~~~Gad~vvvGsai~~~--~d~~~~~~~l 203 (211)
T 3f4w_A 140 QAA---GRKPID----DLITMLKVRRKARIAVAGG-IS--SQTVKDYALLGPDVVIVGSAITHA--ADPAGEARKI 203 (211)
T ss_dssp HHT---TCCSHH----HHHHHHHHCSSCEEEEESS-CC--TTTHHHHHTTCCSEEEECHHHHTC--SSHHHHHHHH
T ss_pred ccc---CCCCHH----HHHHHHHHcCCCcEEEECC-CC--HHHHHHHHHcCCCEEEECHHHcCC--CCHHHHHHHH
Confidence 221 111222 2334445555533434443 23 333356678899999888744332 3444443333
No 56
>3no5_A Uncharacterized protein; PFAM DUF849 domain containing protein, structural genomics, center for structural genomics, JCSG; HET: MSE; 1.90A {Ralstonia eutropha}
Probab=92.48 E-value=5.9 Score=35.74 Aligned_cols=225 Identities=13% Similarity=0.070 Sum_probs=120.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh-hhHHHHHHHHHHHhhc--CcEEEEecCC---CCHHHHHHHHHhc
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDM--GMEVCCTLGM---LEKHQAIELKKAG 194 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~-~~~~~l~~~i~~ik~~--g~~i~~t~g~---l~~e~l~~Lk~aG 194 (386)
..+++||.+.+.++.+.|..-+++-- +++.|.| ...+.+.+++..+++. ++-+.+|.|- ..++. ..+.+..
T Consensus 26 PvTpeEia~~A~~~~~AGAaivHlHv--Rd~~G~~s~d~~~~~e~~~~IR~~~pd~ii~~Ttg~~~~~~e~R-~~~~~~~ 102 (275)
T 3no5_A 26 PITVSEQVESTQAAFEAGATLVHLHV--RNDDETPTSNPDRFALVLEGIRKHAPGMITQVSTGGRSGAGNER-GAMLSLR 102 (275)
T ss_dssp CCSHHHHHHHHHHHHHHTCCEEEECE--ECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCCCTTCCGGG-GTTGGGC
T ss_pred CCCHHHHHHHHHHHHHccCcEEEEee--cCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHH-hhHhhcC
Confidence 38999999999999999998887733 3333444 4557788888888753 5556555542 12222 2222334
Q ss_pred cCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeee
Q 016599 195 LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLA 274 (386)
Q Consensus 195 ~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P 274 (386)
.+..+++.-+.. ..+.+. ..+++...+.++.+.+.|+.....+ | +..++.....++++ |.-...+.+ .|+-
T Consensus 103 Pe~aSl~~gs~N-f~~~v~-~N~~~~~~~~~~~~~e~Gi~pE~e~-f----d~g~l~~~~~l~~~-Gl~~~p~~~-~~vl 173 (275)
T 3no5_A 103 PDMASLATGSVN-FPTRVY-DNPPELVDWLAAEMKTYGIKPEVEA-F----DLSMIFQAAAMQAA-GAIVGPLHI-QFVM 173 (275)
T ss_dssp CSEEEEECSCEE-CSSSEE-CCCHHHHHHHHHHHHHTTCEEEEEE-S----STHHHHHHHHHHHH-TSSCSSCEE-EEEE
T ss_pred CCEEEecCcccc-cccccc-cCCHHHHHHHHHHHHHcCCeeEEEE-E----cHHHHHHHHHHHHC-CCCCCCeeE-EEEe
Confidence 555554443321 001111 2467888888999999999876632 2 34455555455533 210112222 2322
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeec-CcccccChhHHHhhhhcCccccc-cCCccccCCCC-------C
Q 016599 275 VKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLS-AGRVRFSMPEQALCFLAGANSIF-TGEKLLTTPNN-------D 345 (386)
Q Consensus 275 ~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~-~g~~~~~~~~~~~~l~~Gan~~~-~g~~~~t~~~~-------~ 345 (386)
|-+. . .+.+++.+..++...+.+-++....+. -|+.. -.....++..|.+.=+ .++++...++. -
T Consensus 174 --Gv~~-g-~~~~~~~l~~~~~~l~~~~~~~~w~v~g~Gr~~--~p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sNa~l 247 (275)
T 3no5_A 174 --GIKN-A-MPVDREVLEFYVQTLKRLSPDATWTGAGIGRHQ--LTMARWSLELGGHCRTGLEDNVRLDKNTLAPSNAAL 247 (275)
T ss_dssp --CCTT-S-CCCCHHHHHHHHHHHHHHCTTCEEEEEECGGGH--HHHHHHHHHHTCEEEESTTTCCBSSSSCBCSCHHHH
T ss_pred --CCCC-C-CCCCHHHHHHHHHHHHhCCCCCeEEEEecCHhh--HHHHHHHHHhCCCeEEcCCcceeCCCCCCCCCHHHH
Confidence 3221 1 235677766666555443333221221 12211 1334556667776322 12333222331 3
Q ss_pred hhHHHHHHHHcCCCcCCC
Q 016599 346 FDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 346 ~~~~~~~i~~~G~~p~~~ 363 (386)
++..+++++++|+.+...
T Consensus 248 V~~~~~i~~~~gr~vAtp 265 (275)
T 3no5_A 248 VRQVAELCEEYGRPVATA 265 (275)
T ss_dssp HHHHHHHHHHTTCCBCCH
T ss_pred HHHHHHHHHHcCCCCCCH
Confidence 566788999999988754
No 57
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=92.46 E-value=0.83 Score=39.90 Aligned_cols=139 Identities=14% Similarity=0.130 Sum_probs=78.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC------CCCHHHHHHHHHhccC
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG------MLEKHQAIELKKAGLT 196 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g------~l~~e~l~~Lk~aG~~ 196 (386)
..+.+.+.++.+++.|++.|+|+.= ++ .| ....+.+.++++..+. +++..+-. .-..+.++.|.+.|++
T Consensus 74 E~~~M~~Di~~~~~~GadGvV~G~L-t~-dg-~iD~~~~~~Li~~a~~--~~vTFHRAFD~~~~~d~~~ale~L~~lGv~ 148 (224)
T 2bdq_A 74 ELRIMEEDILRAVELESDALVLGIL-TS-NN-HIDTEAIEQLLPATQG--LPLVFHMAFDVIPKSDQKKSIDQLVALGFT 148 (224)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCB-CT-TS-SBCHHHHHHHHHHHTT--CCEEECGGGGGSCTTTHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeE-CC-CC-CcCHHHHHHHHHHhCC--CeEEEECchhccCCcCHHHHHHHHHHcCCC
Confidence 3566677778889999999988542 11 12 3567788888877664 44433311 1226679999999999
Q ss_pred eeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeec
Q 016599 197 AYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV 275 (386)
Q Consensus 197 ~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~ 275 (386)
+|.-+=.. ++.+..+-++.++.+.+ ++- .+.+|.|-|-+.+.+.++++.. + +..+....+.-.
T Consensus 149 rILTSG~~---------~~~~a~~g~~~L~~Lv~~a~~--ri~Im~GgGV~~~Ni~~l~~~t---G--v~e~H~s~i~~~ 212 (224)
T 2bdq_A 149 RILLHGSS---------NGEPIIENIKHIKALVEYANN--RIEIMVGGGVTAENYQYICQET---G--VKQAHGTRITQM 212 (224)
T ss_dssp EEEECSCS---------SCCCGGGGHHHHHHHHHHHTT--SSEEEECSSCCTTTHHHHHHHH---T--CCEEEETTCC--
T ss_pred EEECCCCC---------CCCcHHHHHHHHHHHHHhhCC--CeEEEeCCCCCHHHHHHHHHhh---C--CCEEccccccCC
Confidence 99753111 01112233344444433 232 3567888777777777665443 3 667777777777
Q ss_pred CCCCCCC
Q 016599 276 KGTPLQD 282 (386)
Q Consensus 276 ~gT~l~~ 282 (386)
+|.|++.
T Consensus 213 ~~~~~~~ 219 (224)
T 2bdq_A 213 AGDPLEH 219 (224)
T ss_dssp -------
T ss_pred CCCcchh
Confidence 7888764
No 58
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=92.44 E-value=2.1 Score=38.52 Aligned_cols=186 Identities=12% Similarity=0.032 Sum_probs=96.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCC-CCChhh-------------HHHHHHHHHHHhhc--CcEEEE-e--cCC--
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRKTN-------------FNQILEYVKDIRDM--GMEVCC-T--LGM-- 181 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~-~ge~~~-------------~~~l~~~i~~ik~~--g~~i~~-t--~g~-- 181 (386)
+.++..+.++.+.+.|++-+.++.-..++ ...|.. .+..++.++++++. .+++.. . +..
T Consensus 29 ~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~~~Pv~lm~y~n~v~~ 108 (268)
T 1qop_A 29 GIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHPTIPIGLLMYANLVFN 108 (268)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCSSSCEEEEECHHHHHT
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEEcccHHHH
Confidence 45778888888889999988775321111 111111 34567888888854 455432 1 211
Q ss_pred -CCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 182 -LEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 182 -l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
-.++.++.++++|++.+.+.-.. .++..+.++.+++.|+... .++....+.+.+........
T Consensus 109 ~g~~~~~~~~~~aGadgii~~d~~-------------~e~~~~~~~~~~~~g~~~i--~l~~p~t~~~~i~~i~~~~~-- 171 (268)
T 1qop_A 109 NGIDAFYARCEQVGVDSVLVADVP-------------VEESAPFRQAALRHNIAPI--FICPPNADDDLLRQVASYGR-- 171 (268)
T ss_dssp TCHHHHHHHHHHHTCCEEEETTCC-------------GGGCHHHHHHHHHTTCEEE--CEECTTCCHHHHHHHHHHCC--
T ss_pred hhHHHHHHHHHHcCCCEEEEcCCC-------------HHHHHHHHHHHHHcCCcEE--EEECCCCCHHHHHHHHhhCC--
Confidence 12688999999999987763211 2334466678889998652 23323444454444443322
Q ss_pred CCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccC-hhHHHhhhhcCccccccCCcc
Q 016599 261 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKL 338 (386)
Q Consensus 261 ~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~-~~~~~~~l~~Gan~~~~g~~~ 338 (386)
..+.+....-..|.. .. ......+.++..|... +..+-+. .++. ++....++.+||+.++.|..+
T Consensus 172 ----g~v~~~s~~G~tG~~----~~-~~~~~~~~i~~lr~~~-~~pi~vg---gGI~t~e~~~~~~~agAD~vVVGSai 237 (268)
T 1qop_A 172 ----GYTYLLSRSGVTGAE----NR-GALPLHHLIEKLKEYH-AAPALQG---FGISSPEQVSAAVRAGAAGAISGSAI 237 (268)
T ss_dssp ----SCEEEESSSSCCCSS----SC-C--CCHHHHHHHHHTT-CCCEEEE---SSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred ----CcEEEEecCCcCCCc----cC-CCchHHHHHHHHHhcc-CCcEEEE---CCCCCHHHHHHHHHcCCCEEEEChHH
Confidence 122222211111221 01 1112223344444443 2222222 2333 443344588999999988743
No 59
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=92.16 E-value=1.5 Score=38.70 Aligned_cols=198 Identities=11% Similarity=0.062 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCc
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 204 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~ 204 (386)
+..+.++.+.+.|++.+.+..-.....+.. .. +.++.+++ .++++.+..+..+++.++.+.++|++.|.++.+.
T Consensus 33 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~----~~-~~i~~i~~~~~ipv~v~ggI~~~~~~~~~l~~Gad~V~lg~~~ 107 (244)
T 1vzw_A 33 SPLEAALAWQRSGAEWLHLVDLDAAFGTGD----NR-ALIAEVAQAMDIKVELSGGIRDDDTLAAALATGCTRVNLGTAA 107 (244)
T ss_dssp CHHHHHHHHHHTTCSEEEEEEHHHHHTSCC----CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecCchhhcCCC----hH-HHHHHHHHhcCCcEEEECCcCCHHHHHHHHHcCCCEEEECchH
Confidence 445556777788999988753111001111 12 56666663 5788888888889999999999999999987655
Q ss_pred hHHHHhhhCCCCCHHHHHHHHHHHH-HcCCeeeEe--EEeecCCC--HHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCC
Q 016599 205 SREFYSKIITTRSYDERLETLKHVR-EAGINVCSG--GIIGLGEA--EEDRVGLLHTLATLPTHPESVPINALLAVKGTP 279 (386)
Q Consensus 205 ~~~~~~~i~~~~s~~~~l~~i~~a~-~~Gi~v~~~--~i~Glget--~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~ 279 (386)
.+ +++...+.++.+. +..+.+.+. .+.-.|.. ..+..+.++.+.++| ++.+.++...+. ++.
T Consensus 108 l~----------~p~~~~~~~~~~g~~~~~~l~~~~g~v~~~g~~~~~~~~~e~~~~~~~~G--~~~i~~~~~~~~-~~~ 174 (244)
T 1vzw_A 108 LE----------TPEWVAKVIAEHGDKIAVGLDVRGTTLRGRGWTRDGGDLYETLDRLNKEG--CARYVVTDIAKD-GTL 174 (244)
T ss_dssp HH----------CHHHHHHHHHHHGGGEEEEEEEETTEECCSSSCCCCCBHHHHHHHHHHTT--CCCEEEEEC-------
T ss_pred hh----------CHHHHHHHHHHcCCcEEEEEEccCCEEEEcCcccCCCCHHHHHHHHHhCC--CCEEEEeccCcc-ccc
Confidence 41 1222333333322 111122221 12212221 013455556666675 666766654432 211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhc---CccccccCCccccCCCCChhHHHHHH
Q 016599 280 LQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLA---GANSIFTGEKLLTTPNNDFDADQLMF 353 (386)
Q Consensus 280 l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~---Gan~~~~g~~~~t~~~~~~~~~~~~i 353 (386)
..++.+.+.++. ... +..+ +..|-++- ++.....+.+ ||+.++.|..+.. ...++.+.+..+
T Consensus 175 ----~g~~~~~~~~i~----~~~-~ipv-ia~GGI~~-~~d~~~~~~~~~~Gadgv~vG~al~~-~~~~~~~~~~~~ 239 (244)
T 1vzw_A 175 ----QGPNLELLKNVC----AAT-DRPV-VASGGVSS-LDDLRAIAGLVPAGVEGAIVGKALYA-KAFTLEEALEAT 239 (244)
T ss_dssp -----CCCHHHHHHHH----HTC-SSCE-EEESCCCS-HHHHHHHHTTGGGTEEEEEECHHHHT-TSSCHHHHHHHH
T ss_pred ----CCCCHHHHHHHH----Hhc-CCCE-EEECCCCC-HHHHHHHHhhccCCCceeeeeHHHHc-CCCCHHHHHHHh
Confidence 123333332222 222 2112 22222221 2333556667 9999988874442 233566655544
No 60
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=91.86 E-value=4 Score=35.73 Aligned_cols=75 Identities=11% Similarity=0.052 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCc
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 204 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~ 204 (386)
+..+.++.+.+.|++.+.+..-.....+.+ .. +.++.+++ .++++.+..|..+++.++.+.++|++.+.++.+.
T Consensus 32 d~~~~a~~~~~~Gad~i~v~~~d~~~~~~~----~~-~~i~~i~~~~~ipv~v~ggi~~~~~~~~~l~~Gad~V~lg~~~ 106 (244)
T 2y88_A 32 SAVDAALGWQRDGAEWIHLVDLDAAFGRGS----NH-ELLAEVVGKLDVQVELSGGIRDDESLAAALATGCARVNVGTAA 106 (244)
T ss_dssp EHHHHHHHHHHTTCSEEEEEEHHHHTTSCC----CH-HHHHHHHHHCSSEEEEESSCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CHHHHHHHHHHcCCCEEEEEcCcccccCCC----hH-HHHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEECchH
Confidence 445556677778999988753211111211 12 66666663 5788888888889999999999999999987655
Q ss_pred h
Q 016599 205 S 205 (386)
Q Consensus 205 ~ 205 (386)
.
T Consensus 107 l 107 (244)
T 2y88_A 107 L 107 (244)
T ss_dssp H
T ss_pred h
Confidence 4
No 61
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=91.84 E-value=3.9 Score=37.70 Aligned_cols=98 Identities=16% Similarity=0.258 Sum_probs=60.9
Q ss_pred CeeEEEEeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC----hhhHH
Q 016599 84 REVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR----KTNFN 159 (386)
Q Consensus 84 ~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge----~~~~~ 159 (386)
.+..+.+++|+ |+- +|+. + .+..+++.+++.+++..+.|.+-+-+++-.+-++.+ ....+
T Consensus 8 ~~~~iMGIlNv-TPD--------SFsd----g---g~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~ 71 (314)
T 2vef_A 8 AKTVICGIINV-TPD--------SFSD----G---GQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQ 71 (314)
T ss_dssp CCCEEEEEEEC-CC------------------------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHH
T ss_pred CCceEEEEEeC-CCC--------CCCC----C---CCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHH
Confidence 44567788888 543 3432 1 223689999999999999999877776632222211 14567
Q ss_pred HHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 160 QILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 160 ~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
++...|+.+++. ++.+++ .....+.++.-.++|.+.|+
T Consensus 72 Rv~pvI~~l~~~~~vpiSI--DT~~~~Va~aAl~aGa~iIN 110 (314)
T 2vef_A 72 RVVPVIKAIRKESDVLISI--DTWKSQVAEAALAAGADLVN 110 (314)
T ss_dssp HHHHHHHHHHHHCCCEEEE--ECSCHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHhhCCceEEE--eCCCHHHHHHHHHcCCCEEE
Confidence 788888888753 555543 44567777777777877776
No 62
>3cu2_A Ribulose-5-phosphate 3-epimerase; YP_718263.1, ribulose-PHOS epimerase family, structural genomics, joint center for STR genomics, JCSG; 1.91A {Haemophilus somnus}
Probab=91.65 E-value=0.46 Score=42.15 Aligned_cols=189 Identities=9% Similarity=0.077 Sum_probs=100.4
Q ss_pred HHHHHHHHHHHcCCcEEEEe-cccCCCCCChhhHHHHHHHHHHHhhc---CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 126 AVMQAAQKAKEAGSTRFCMG-AAWRDTIGRKTNFNQILEYVKDIRDM---GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~-~g~~~~~ge~~~~~~l~~~i~~ik~~---g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.+.+.++.+.+.|++-+++- ..++.. | ++..=.+.++.+++. .+.+.+++ .+..++.+.++|.|.+.+.
T Consensus 27 ~l~~~i~~~~~~gad~lhvDvmDG~fv---p-n~t~G~~~v~~lr~~~~~DvhLMv~~---p~~~i~~~~~aGAd~itvH 99 (237)
T 3cu2_A 27 QLNEEVTTLLENQINVLHFDIADGQFS---S-LFTVGAIGIKYFPTHCFKDVHLMVRN---QLEVAKAVVANGANLVTLQ 99 (237)
T ss_dssp GHHHHHHHHHHTTCCEEEEEEEBSSSS---S-CBCBCTHHHHTSCTTSEEEEEEECSC---HHHHHHHHHHTTCSEEEEE
T ss_pred cHHHHHHHHHHcCCCEEEEEEecCccc---c-chhhhHHHHHHHhhhCCCCeEEEEEC---HHHHHHHHHHcCCCEEEEe
Confidence 44555666667888766542 111110 1 111112455555542 22233232 2678999999999999887
Q ss_pred cCchHHHHhhhCCCCCHHHHHHHHHHHHHc---------CCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeee
Q 016599 202 LDTSREFYSKIITTRSYDERLETLKHVREA---------GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINAL 272 (386)
Q Consensus 202 le~~~~~~~~i~~~~s~~~~l~~i~~a~~~---------Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f 272 (386)
.++. ... .+.++.+++. |..+...+ .. .|..+. ++.+.+ .++.+.+...
T Consensus 100 ~ea~----------~~~---~~~i~~i~~~~~~~~~~~~g~~~gv~l--~p-~Tp~~~---l~~~l~---~~D~vlvMsv 157 (237)
T 3cu2_A 100 LEQY----------HDF---ALTIEWLAKQKTTYANQVYPVLIGACL--CP-ETPISE---LEPYLD---QIDVIQLLTL 157 (237)
T ss_dssp TTCT----------TSH---HHHHHHHTTCEEEETTEEEECEEEEEE--CT-TSCGGG---GTTTTT---TCSEEEEESE
T ss_pred cCCc----------ccH---HHHHHHHHhcccccccccCCceEEEEE--eC-CChHHH---HHHHhh---cCceeeeeee
Confidence 7663 112 3566777877 66554433 22 233221 111112 2677777776
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhCCC----cceeecCcccccChhHHHhhhh--cCccccccCCccccCCCCCh
Q 016599 273 LAVKGTPLQDQKPVEIWEMIRMIATARIVMPK----AMVRLSAGRVRFSMPEQALCFL--AGANSIFTGEKLLTTPNNDF 346 (386)
Q Consensus 273 ~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~----~~i~i~~g~~~~~~~~~~~~l~--~Gan~~~~g~~~~t~~~~~~ 346 (386)
.|.-|+. .. ....++.+...|.+.++ ..+.+.+ ++..+....... +|||.++.|..+. .. ++
T Consensus 158 ~pgfggq----~f--~~~~l~ki~~lr~~~~~~~~~~~I~vdG---GI~~~~~~~~~~~~aGad~~VvGSaIf-~~--d~ 225 (237)
T 3cu2_A 158 DPRNGTK----YP--SELILDRVIQVEKRLGNRRVEKLINIDG---SMTLELAKYFKQGTHQIDWLVSGSALF-SG--EL 225 (237)
T ss_dssp ETTTTEE----CC--HHHHHHHHHHHHHHHGGGGGGCEEEEES---SCCHHHHHHHHHSSSCCCCEEECGGGG-SS--CH
T ss_pred ccCcCCe----ec--ChhHHHHHHHHHHHHHhcCCCceEEEEC---CcCHHHHHHHHHhCCCCcEEEEeeHHh-CC--CH
Confidence 6633322 11 33445555555555542 2233443 344455566788 9999999997433 32 56
Q ss_pred hHHHHHHHH
Q 016599 347 DADQLMFKV 355 (386)
Q Consensus 347 ~~~~~~i~~ 355 (386)
.+..+.+++
T Consensus 226 ~~~~~~l~~ 234 (237)
T 3cu2_A 226 KTNLKVWKS 234 (237)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 666665554
No 63
>1m5w_A Pyridoxal phosphate biosynthetic protein PDXJ; TIM barrel, protein-substrate complex, multi-binding states; HET: DXP; 1.96A {Escherichia coli} SCOP: c.1.24.1 PDB: 1ho1_A 1ho4_A* 1ixn_A* 1ixo_A* 1ixp_A 1ixq_A 3f4n_A*
Probab=91.38 E-value=0.83 Score=40.14 Aligned_cols=117 Identities=11% Similarity=0.162 Sum_probs=78.3
Q ss_pred HHHHHHHHHHHHcCCcEEEEe----------cccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhc
Q 016599 125 DAVMQAAQKAKEAGSTRFCMG----------AAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAG 194 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~----------~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG 194 (386)
+|+++.+...+ ...++++ ||+.. ....+.+.+.++.+++.|+.++.-.. -+.+.++.-++.|
T Consensus 77 ~emi~ia~~~k---P~~vtLVPE~r~e~TTegGldv----~~~~~~l~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~G 148 (243)
T 1m5w_A 77 EEMLAIAVETK---PHFCCLVPEKRQEVTTEGGLDV----AGQRDKMRDACKRLADAGIQVSLFID-ADEEQIKAAAEVG 148 (243)
T ss_dssp HHHHHHHHHHC---CSEEEECCCCSSCSSCCSCCCS----GGGHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTT
T ss_pred HHHHHHHHHcC---CCEEEECCCCCCCcCCCcchhH----HhhHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhC
Confidence 46676655543 4677776 22211 23678999999999999999755443 4689999999999
Q ss_pred cCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHH
Q 016599 195 LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGL 253 (386)
Q Consensus 195 ~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~ 253 (386)
.++|-+.-..+.+.+........++...++.+.+++.|+.|+. |+|-|.+.+..+
T Consensus 149 A~~IELhTG~Ya~a~~~~~~~~el~~i~~aa~~A~~lGL~VnA----GHgL~y~Nv~~i 203 (243)
T 1m5w_A 149 APFIEIHTGCYADAKTDAEQAQELARIAKAATFAASLGLKVNA----GHGLTYHNVKAI 203 (243)
T ss_dssp CSEEEEECHHHHHCCSHHHHHHHHHHHHHHHHHHHHTTCEEEE----ESSCCTTTHHHH
T ss_pred cCEEEEechhhhcCCCchhHHHHHHHHHHHHHHHHHcCCEEec----CCCCCHHHHHHH
Confidence 9999875544411111000112467777888889999999887 677776665544
No 64
>3e49_A Uncharacterized protein DUF849 with A TIM barrel; structural genomics, joint center for structural genomics; HET: MSE; 1.75A {Burkholderia xenovorans LB400}
Probab=91.37 E-value=8.6 Score=35.31 Aligned_cols=227 Identities=18% Similarity=0.164 Sum_probs=125.1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCC-CCCCh-hhHHHHHHHHHHHhhc-CcEEEEecC-C---CCHHHHHHHHHh
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRD-TIGRK-TNFNQILEYVKDIRDM-GMEVCCTLG-M---LEKHQAIELKKA 193 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~-~~ge~-~~~~~l~~~i~~ik~~-g~~i~~t~g-~---l~~e~l~~Lk~a 193 (386)
..+++||.+.+.++.+.|..-+++-. ++ ..|.| ...+.+.+++..|++. .+-+..|.| . -.++.+..+.+.
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHv--Rdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~~~~~~eerla~~~~~ 105 (311)
T 3e49_A 28 PVTPDEVAQASIGAAEAGAAVIHLHA--RDPRDGRPTQDPAAFAEFLPRIKSNTDAVINLTTGGSPHMTVEERLRPATHY 105 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHTTHHHHHHHHCCCEEEECSCSCTTSCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCCCCCCHHHHHHHHHhc
Confidence 38999999999999999998888733 22 12433 4556777777777743 444444433 2 235566666665
Q ss_pred ccCeeecccCch------------------HH-HH----hhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHH
Q 016599 194 GLTAYNHNLDTS------------------RE-FY----SKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDR 250 (386)
Q Consensus 194 G~~~v~i~le~~------------------~~-~~----~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~ 250 (386)
..+..+++.-+. +. .+ +.+- ..+++...+.++.+.+.|+.....+ | +..++
T Consensus 106 ~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~-~n~~~~i~~~~~~~~e~Gi~pE~e~-f----d~g~l 179 (311)
T 3e49_A 106 MPELASLNMGSMNFGLYPMLERFKEFAHGWEREHLERSRDLVF-KNTFADIEFILKTCGGNGTRFEFEC-Y----DTSHL 179 (311)
T ss_dssp CCSEEEEECSCEECCCGGGGGTCCCCSSHHHHHHHHGGGGCEE-CCCHHHHHHHHHHHHTTTCEEEEEE-C----SHHHH
T ss_pred CCCeeeecCCCcccccccchhhccccccccchhhcccCCCcee-cCCHHHHHHHHHHHHHcCCeeEEEE-E----CHHHH
Confidence 566555443321 10 11 1111 2367788888999999999876633 2 45566
Q ss_pred HHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcce-ee-cCcccccChhHHHhhhhcC
Q 016599 251 VGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMV-RL-SAGRVRFSMPEQALCFLAG 328 (386)
Q Consensus 251 ~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i-~i-~~g~~~~~~~~~~~~l~~G 328 (386)
.....++++ |.-...+.+ .|+- |-+. . .+.+++.+..++..+..++|.... .+ ..|+.. -.....++..|
T Consensus 180 ~~~~~l~~~-Gl~~~p~~~-~~vl--Gv~~-g-~~~~~~~L~~~~~~~~~~~~~~~~wsv~~~Gr~~--~p~~~~A~~~G 251 (311)
T 3e49_A 180 YNLAHFVDR-KLATPPFFV-QTVF--GLLG-G-IGPHPEDLAHMRRTADRLFGADYVWSILGAGRHQ--IPLASIGAAQG 251 (311)
T ss_dssp HHHHHHHHT-TCSCSSEEE-EEEE--SCTT-S-CCCCHHHHHHHHHHHHHHHGGGEEEEEEECGGGH--HHHHHHHHTTT
T ss_pred HHHHHHHHc-CCCCCCeEE-EEEe--cCCC-C-CCCCHHHHHHHHHHHHhhCCCCCeEEEEeeChhh--HHHHHHHHHcC
Confidence 665555544 311112222 3332 3221 2 245777777776665444553221 11 122222 23345666777
Q ss_pred ccccc-cCCccccCCC-------CChhHHHHHHHHcCCCcCCC
Q 016599 329 ANSIF-TGEKLLTTPN-------NDFDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 329 an~~~-~g~~~~t~~~-------~~~~~~~~~i~~~G~~p~~~ 363 (386)
.|.=+ .++++...++ .-++..+++++++|+.+...
T Consensus 252 GhvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lgr~vATp 294 (311)
T 3e49_A 252 ANVRVGLEDSLWIAPGELAETNAAQVRKIRQVIEGLSLEVASP 294 (311)
T ss_dssp CEEEECTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCCBCCH
T ss_pred CCeEEcCCcceecCCCCCCCCHHHHHHHHHHHHHHcCCCCCCH
Confidence 76322 1232222222 24566788999999988654
No 65
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=90.90 E-value=2.5 Score=40.87 Aligned_cols=97 Identities=9% Similarity=0.126 Sum_probs=62.1
Q ss_pred CCeeEEEEeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHHcCCcEEEEecccCCCCC----ChhhH
Q 016599 83 FREVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG----RKTNF 158 (386)
Q Consensus 83 g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~g----e~~~~ 158 (386)
+.+..+.+++|+ |+- +|+. .+ .+.+++++.+++..+.|++-+-++|-.+-++. +....
T Consensus 188 ~~~~~vMGIlNv-TPD--------SFsD---gg------~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~ 249 (442)
T 3mcm_A 188 LANTIRMGIVNL-SNQ--------SFSD---GN------FDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEF 249 (442)
T ss_dssp CCSSEEEEEEEC-SSC--------C-CC---CS------SCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHH
T ss_pred CCCceEEEEEeC-CCC--------CCCC---CC------CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHH
Confidence 345666777887 543 3431 11 46788999999999999987777653332221 12345
Q ss_pred HHHHHHHHHHhh------cCcEEEEecCCCCHHHHHHHHH--hccCe-ee
Q 016599 159 NQILEYVKDIRD------MGMEVCCTLGMLEKHQAIELKK--AGLTA-YN 199 (386)
Q Consensus 159 ~~l~~~i~~ik~------~g~~i~~t~g~l~~e~l~~Lk~--aG~~~-v~ 199 (386)
+++...|+.+++ .++.++ ..+...+.++.-.+ +|.+. |+
T Consensus 250 ~Rv~pvI~~l~~~~~~~~~~vpIS--IDT~~~~VaeaAL~~~aGa~i~IN 297 (442)
T 3mcm_A 250 NKLNEFLEYFKSQLANLIYKPLVS--IDTRKLEVMQKILAKHHDIIWMIN 297 (442)
T ss_dssp HHHHHHHHHHHHHTTTCSSCCEEE--EECCCHHHHHHHHHHHGGGCCEEE
T ss_pred HHHHHHHHHHHhhccccCCCCeEE--EeCCCHHHHHHHHhhCCCCCEEEE
Confidence 677777888875 144444 44567888888887 89887 65
No 66
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=90.48 E-value=12 Score=35.41 Aligned_cols=203 Identities=16% Similarity=0.099 Sum_probs=115.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCC--------------CC---------hhhHHHHHHHHHHHhhcCcEEEEec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI--------------GR---------KTNFNQILEYVKDIRDMGMEVCCTL 179 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~--------------ge---------~~~~~~l~~~i~~ik~~g~~i~~t~ 179 (386)
+.|...+.++.+++.|++-+-++.-...+. +. .+..+++..+.+..++.|+.+.+++
T Consensus 42 sle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e~~~~L~~~~~~~Gi~~~stp 121 (385)
T 1vli_A 42 KLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAEWILPLLDYCREKQVIFLSTV 121 (385)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGGGHHHHHHHHHHTTCEEECBC
T ss_pred cHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHHHHHHHHHHHHHcCCcEEEcc
Confidence 788999999999999999887764321110 00 0223555666666667888876654
Q ss_pred CCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhc
Q 016599 180 GMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLAT 259 (386)
Q Consensus 180 g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~ 259 (386)
.+.+.++.|.+.|++.+.|+---. .+ +.-++.+.+.|.+|-. =-|+. |.+|+...++.+..
T Consensus 122 --fD~~svd~l~~~~vd~~KIgS~~~----------~N----~pLL~~va~~gKPViL--StGma-Tl~Ei~~Ave~i~~ 182 (385)
T 1vli_A 122 --CDEGSADLLQSTSPSAFKIASYEI----------NH----LPLLKYVARLNRPMIF--STAGA-EISDVHEAWRTIRA 182 (385)
T ss_dssp --CSHHHHHHHHTTCCSCEEECGGGT----------TC----HHHHHHHHTTCSCEEE--ECTTC-CHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHhcCCCEEEECcccc----------cC----HHHHHHHHhcCCeEEE--ECCCC-CHHHHHHHHHHHHH
Confidence 678999999998998888742111 11 2345555666766211 12333 89999999999998
Q ss_pred CCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccC-hhHHHhhhhcCcccc---ccC
Q 016599 260 LPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSI---FTG 335 (386)
Q Consensus 260 l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~-~~~~~~~l~~Gan~~---~~g 335 (386)
.| +.+.+-++...-+|. +. .+--++.+...+..+|...+-.+ +. +.+ ......++..||+-+ ++-
T Consensus 183 ~G-n~~iiLlhc~s~YPt-p~-------~~~nL~aI~~Lk~~f~~lpVG~S-dH-t~G~~~~~~AAvAlGA~iIEkHftl 251 (385)
T 1vli_A 183 EG-NNQIAIMHCVAKYPA-PP-------EYSNLSVIPMLAAAFPEAVIGFS-DH-SEHPTEAPCAAVRLGAKLIEKHFTI 251 (385)
T ss_dssp TT-CCCEEEEEECSSSSC-CG-------GGCCTTHHHHHHHHSTTSEEEEE-EC-CSSSSHHHHHHHHTTCSEEEEEBCS
T ss_pred CC-CCcEEEEeccCCCCC-Ch-------hhcCHHHHHHHHHHcCCCCEEeC-CC-CCCchHHHHHHHHcCCCEEEeCCCc
Confidence 86 223333332222221 11 11113445566666643223222 11 223 556677888899954 222
Q ss_pred Cc-c---ccCCCCChhHHHHHHHH
Q 016599 336 EK-L---LTTPNNDFDADQLMFKV 355 (386)
Q Consensus 336 ~~-~---~t~~~~~~~~~~~~i~~ 355 (386)
++ . ......++++..+|+++
T Consensus 252 dra~~G~D~~~SL~P~ef~~lv~~ 275 (385)
T 1vli_A 252 DKNLPGADHSFALNPDELKEMVDG 275 (385)
T ss_dssp CTTSSCSSCTTSBCHHHHHHHHHH
T ss_pred cccCCCCchhhhCCHHHHHHHHHH
Confidence 21 1 12234566666666543
No 67
>2y7e_A 3-keto-5-aminohexanoate cleavage enzyme; lyase, aldolase; 1.28A {Candidatus cloacamonas acidaminovoransorganism_taxid} PDB: 2y7d_A 2y7f_A* 2y7g_A
Probab=90.39 E-value=10 Score=34.36 Aligned_cols=224 Identities=13% Similarity=0.136 Sum_probs=121.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh-hhHHHHHHHHHHHhhc--CcEEEEecCCC---C-HHHHHHHHHhc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDM--GMEVCCTLGML---E-KHQAIELKKAG 194 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~-~~~~~l~~~i~~ik~~--g~~i~~t~g~l---~-~e~l~~Lk~aG 194 (386)
.+++||.+.+.++.+.|..-+++=. ++..|.| ...+.+.+++..+++. ++-+.+|.|.. + ++.+.-+ +..
T Consensus 31 vTpeEia~~A~~a~~AGAaivHlHv--Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTg~~~~~~~eeR~~~~-~~~ 107 (282)
T 2y7e_A 31 ITPEEQAKEAKACFEAGARVIHLHI--REDDGRPSQRLDRFQEAISAIREVVPEIIIQISTGGAVGESFDKRLAPL-ALK 107 (282)
T ss_dssp CSHHHHHHHHHHHHHHTEEEEEECE--ECTTSCEECCHHHHHHHHHHHHHHCTTSEEEECSSCSTTCCHHHHHGGG-GGC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCCCCCCCHHHHHHHh-hcC
Confidence 8999999999999999998887733 2222333 4567778888888754 55565555432 2 3344444 455
Q ss_pred cCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCC-CeEeeeeee
Q 016599 195 LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHP-ESVPINALL 273 (386)
Q Consensus 195 ~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~-~~v~~~~f~ 273 (386)
.+..++++-+.. .-+.+ -..+++...+.++.+++.|+.....+ | +..++.....++++ |. . +.-.+..|+
T Consensus 108 Pe~asl~~gs~N-f~~~v-~~n~~~~~~~~~~~~~e~Gv~pE~e~-f----d~g~l~~~~~l~~~-Gl-~p~~p~~~~~V 178 (282)
T 2y7e_A 108 PEMATLNAGTLN-FGDDI-FINHPADIIRLAEAFKQYNVVPEVEV-Y----ESGMVDAVARLIKK-GI-ITQNPLHIQFV 178 (282)
T ss_dssp CSEEEEECCCEE-ETTEE-ECCCHHHHHHHHHHHHHTTCEEEEEE-C----SHHHHHHHHHHHHT-TS-CCCSSCEEEEE
T ss_pred CCEEEecccccc-ccccc-ccCCHHHHHHHHHHHHHcCCeEEEEE-E----CHHHHHHHHHHHHc-CC-CCCCCeEEEEE
Confidence 666665554431 00011 13578888889999999999876633 2 35566655555543 31 2 111122222
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeec-CcccccChhHHHhhhhcCccccc-cCCccccCCC-------C
Q 016599 274 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLS-AGRVRFSMPEQALCFLAGANSIF-TGEKLLTTPN-------N 344 (386)
Q Consensus 274 P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~-~g~~~~~~~~~~~~l~~Gan~~~-~g~~~~t~~~-------~ 344 (386)
- |-+. . -+.+++.+..++.....-.|+....+. -|+..+ .....++..|.+.=+ .++++...++ .
T Consensus 179 l--Gv~~-g-~~~~~~~L~~~~~~lp~~~~~~~wsv~g~Gr~q~--p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sNa~ 252 (282)
T 2y7e_A 179 L--GVPG-G-MSGKPKNLMYMMEHLKEEIPTATWAVAGIGRWHI--PTSLIAMVTGGHIRCGFEDNIFYHKGVIAESNAQ 252 (282)
T ss_dssp E--CCTT-S-CCCCHHHHHHHHHHHHHHSTTCEEEEEECGGGHH--HHHHHHHTTTCEEEESTTTCCEEETTEECSCHHH
T ss_pred E--ecCC-C-CCCCHHHHHHHHHhcccccCCCeEEEEecCcchH--HHHHHHHHcCCCeEEccccccCCCCCCCCCCHHH
Confidence 1 2211 1 235777777666542211113221111 121111 234556667776322 1222222222 2
Q ss_pred ChhHHHHHHHHcCCCcCCC
Q 016599 345 DFDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 345 ~~~~~~~~i~~~G~~p~~~ 363 (386)
-++...++++++|+.+...
T Consensus 253 lV~~~~~i~~~lgr~vAtp 271 (282)
T 2y7e_A 253 LVARLARIAKEIGRPLATP 271 (282)
T ss_dssp HHHHHHHHHHHHTCCBCCH
T ss_pred HHHHHHHHHHHcCCCCCCH
Confidence 4566788899999988653
No 68
>2bmb_A Folic acid synthesis protein FOL1; folate biosynthesis, transferase, ligase, multifunctional enzyme; HET: PMM; 2.3A {Saccharomyces cerevisiae}
Probab=90.35 E-value=7.4 Score=38.64 Aligned_cols=77 Identities=16% Similarity=0.176 Sum_probs=50.7
Q ss_pred CHHHHHHHHHHHHHcC-----CcEEEEecccCCCC----CChhhHHHHHHHHHHHhhc----CcEEEEecCCCCHHHHHH
Q 016599 123 TKDAVMQAAQKAKEAG-----STRFCMGAAWRDTI----GRKTNFNQILEYVKDIRDM----GMEVCCTLGMLEKHQAIE 189 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G-----~~~v~l~~g~~~~~----ge~~~~~~l~~~i~~ik~~----g~~i~~t~g~l~~e~l~~ 189 (386)
+.+++++.++++.+.| +.-+-++|-.+-++ .+...++++..+|+.+++. ...+.++..+...+.++.
T Consensus 247 ~~~~al~~a~~mv~~G~~~~~AdIIDIGgeSTRPGa~~vs~eEEl~RvvpvI~~i~~~~~~~~~~vpISIDT~~a~Vaea 326 (545)
T 2bmb_A 247 DIESQLNDIIKLCKDALYLHESVIIDVGGCSTRPNSIQASEEEEIRRSIPLIKAIRESTELPQDKVILSIDTYRSNVAKE 326 (545)
T ss_dssp CHHHHHHHHHHHHHHHHTTCSCEEEEEECSCCSTTCCCCCHHHHHHHHHHHHHHHHHCSSSCGGGEEEEEECCCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCCCCceEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCcHHHHHH
Confidence 8999999999999999 87776765332222 2234567778888888651 012333444566777777
Q ss_pred HHHhccCeee
Q 016599 190 LKKAGLTAYN 199 (386)
Q Consensus 190 Lk~aG~~~v~ 199 (386)
-.++|.+-|+
T Consensus 327 Al~aGadIIN 336 (545)
T 2bmb_A 327 AIKVGVDIIN 336 (545)
T ss_dssp HHHTTCCEEE
T ss_pred HHHcCCCEEE
Confidence 7777777776
No 69
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=90.32 E-value=5.4 Score=35.38 Aligned_cols=204 Identities=14% Similarity=0.061 Sum_probs=86.5
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCchH
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSR 206 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~ 206 (386)
.+.++.+.+.|++.+.+..-.....+.. ..++.++.+++ .++++.+..|..+.+.++.+.++|++.+.++-...+
T Consensus 33 ~~~a~~~~~~Ga~~i~v~d~~~~~~~~g----~~~~~i~~i~~~~~iPvi~~ggi~~~~~i~~~~~~Gad~v~lg~~~~~ 108 (266)
T 2w6r_A 33 RDWVVEVEKRGAGEILLTSIDRDGTKSG----YDTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADKALAASVFHF 108 (266)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTSSCSSC----CCHHHHHHHGGGCCSCEEEESCCCSTHHHHHHHHHTCSEEECCCCC--
T ss_pred HHHHHHHHHCCCCEEEEEecCcccCCCc----ccHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCcHhhhhHHHHh
Confidence 4455566678999888854221111111 13456666664 478888887877888899999999999988643321
Q ss_pred HHHhhhCCCCCHHHHHHHHHHHHHcC--C---eeeEeE--------EeecCCCH---HHHHHHHHHHhcCCCCCCeEeee
Q 016599 207 EFYSKIITTRSYDERLETLKHVREAG--I---NVCSGG--------IIGLGEAE---EDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 207 ~~~~~i~~~~s~~~~l~~i~~a~~~G--i---~v~~~~--------i~Glget~---ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
. ..+++...+. +...| . -+.+.+ +.-.|... .+..+.++.+.+++ +..+.++
T Consensus 109 ~-------~~~~~~~~~~---~~~~g~~~~~i~~~~d~~~~~g~~~v~~~g~~~~~~~~~~e~~~~~~~~G--~~~i~~t 176 (266)
T 2w6r_A 109 R-------EIDMRELKEY---LKKHGGSGQAVVVAIDAKRVDGEFMVFTHSGKKNTGILLRDWVVEVEKRG--AGEILLT 176 (266)
T ss_dssp -----------CHHHHHH---CC----CCCEEEEEEEEEEETTEEEEEETTTTEEEEEEHHHHHHHHHHTT--CSEEEEE
T ss_pred C-------CCCHHHHHHH---HHHcCCCCCEEEEEEEEEecCCCEEEEECCCceecchhHHHHHHHHHHcC--CCEEEEE
Confidence 0 0012222222 22333 1 122222 22123210 12344445556675 5555543
Q ss_pred eeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHH
Q 016599 271 ALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQ 350 (386)
Q Consensus 271 ~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~ 350 (386)
.... .|+. ..++.+. +...+... +..+-..+| ++- ++.....+.+||+.++.|..+. ....+.++..
T Consensus 177 ~~~~-~g~~----~g~~~~~----i~~l~~~~-~ipvia~GG-I~~-~ed~~~~~~~Gadgv~vgsal~-~~~~~~~~~~ 243 (266)
T 2w6r_A 177 SIDR-DGTK----SGYDTEM----IRFVRPLT-TLPIIASGG-AGK-MEHFLEAFLAGADAALAASVFH-FREIDMRELK 243 (266)
T ss_dssp ETTT-TTTC----SCCCHHH----HHHHGGGC-CSCEEEESC-CCS-HHHHHHHHHHTCSEEEESTTTC-----------
T ss_pred eecC-CCCc----CCCCHHH----HHHHHHHc-CCCEEEeCC-CCC-HHHHHHHHHcCCHHHHccHHHH-cCCCCHHHHH
Confidence 2211 1222 1233222 22222222 211112222 221 2222345568999999887443 3334678888
Q ss_pred HHHHHcCCCc
Q 016599 351 LMFKVLGLTP 360 (386)
Q Consensus 351 ~~i~~~G~~p 360 (386)
+.+++.|+..
T Consensus 244 ~~l~~~g~~~ 253 (266)
T 2w6r_A 244 EYLKKHGVNV 253 (266)
T ss_dssp ----------
T ss_pred HHHHHCCCcc
Confidence 8899999844
No 70
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=90.30 E-value=2.1 Score=39.60 Aligned_cols=76 Identities=14% Similarity=0.175 Sum_probs=47.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCC---CChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccC
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI---GRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLT 196 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~---ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~ 196 (386)
.+.+++++.+++..+.|.+-+-++|..+-++ .+....+++...|+.+++. ++.+++ .....+.++.-.++|.+
T Consensus 62 ~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~vpISI--DT~~~~VaeaAl~aGa~ 139 (318)
T 2vp8_A 62 FSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQLISV--DTWRAQVAKAACAAGAD 139 (318)
T ss_dssp --CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTCEEEE--ECSCHHHHHHHHHHTCC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCeEEE--eCCCHHHHHHHHHhCCC
Confidence 6789999999999999998777765322222 1234456677778888743 555543 34567777777777777
Q ss_pred eee
Q 016599 197 AYN 199 (386)
Q Consensus 197 ~v~ 199 (386)
.|+
T Consensus 140 iIN 142 (318)
T 2vp8_A 140 LIN 142 (318)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 71
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=90.21 E-value=9 Score=33.91 Aligned_cols=130 Identities=18% Similarity=0.157 Sum_probs=90.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe---------cCCCCHHHHHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT---------LGMLEKHQAIELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t---------~g~l~~e~l~~Lk~ 192 (386)
+++..+.+.++.+.+. ++.+-+.+|.... ...+.+.+.|+..++.|+.++.- .| .-++.++..++
T Consensus 23 lg~~~~~d~Le~~g~y-ID~lKfg~Gt~~l----~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg-~~~~yl~~~k~ 96 (251)
T 1qwg_A 23 LPPKFVEDYLKVCGDY-IDFVKFGWGTSAV----IDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKG-KFDEFLNECEK 96 (251)
T ss_dssp CCHHHHHHHHHHHGGG-CSEEEECTTGGGG----SCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTT-CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCceeee----cCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcC-cHHHHHHHHHH
Confidence 7888877777665544 6777776653221 12355888888888888886532 23 45889999999
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-------CCCHHHHHHHHHHHhcCCCCCC
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-------GEAEEDRVGLLHTLATLPTHPE 265 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-------get~ed~~~~l~~l~~l~~~~~ 265 (386)
.|++.|-+|--+. .-+.+++.+.|+.+++.|+.+-+.+ |. -.+.+++++.++.-.+.| .+
T Consensus 97 lGf~~iEiS~G~i---------~l~~~~~~~~I~~~~~~G~~v~~Ev--G~k~~~~~~~~~~~~~I~~~~~~LeAG--A~ 163 (251)
T 1qwg_A 97 LGFEAVEISDGSS---------DISLEERNNAIKRAKDNGFMVLTEV--GKKMPDKDKQLTIDDRIKLINFDLDAG--AD 163 (251)
T ss_dssp HTCCEEEECCSSS---------CCCHHHHHHHHHHHHHTTCEEEEEE--CCSSHHHHTTCCHHHHHHHHHHHHHHT--CS
T ss_pred cCCCEEEECCCcc---------cCCHHHHHHHHHHHHHCCCEEeeec--cccCCcccCCCCHHHHHHHHHHHHHCC--Cc
Confidence 9999999875442 3468889999999999999864433 32 236688888887777776 55
Q ss_pred eEeee
Q 016599 266 SVPIN 270 (386)
Q Consensus 266 ~v~~~ 270 (386)
.|.+-
T Consensus 164 ~ViiE 168 (251)
T 1qwg_A 164 YVIIE 168 (251)
T ss_dssp EEEEC
T ss_pred EEEEe
Confidence 55443
No 72
>3e02_A Uncharacterized protein DUF849; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.90A {Burkholderia xenovorans LB400}
Probab=90.09 E-value=11 Score=34.52 Aligned_cols=228 Identities=14% Similarity=0.173 Sum_probs=125.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCC-CCCCh-hhHHHHHHHHHHHhhc-CcEEEEecC-C---CCHHHHHHHHHh
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRD-TIGRK-TNFNQILEYVKDIRDM-GMEVCCTLG-M---LEKHQAIELKKA 193 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~-~~ge~-~~~~~l~~~i~~ik~~-g~~i~~t~g-~---l~~e~l~~Lk~a 193 (386)
..+++||.+.+.++.+.|..-+++-. ++ ..|.| ...+.+.+++..|++. .+-+..|.| . -.++.+..+.+.
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHv--Rdp~dG~ps~d~~~~~e~~~~IR~~~d~iI~~TTgg~~~~~~eerla~~~~~ 105 (311)
T 3e02_A 28 PITPEEIVKEGVAAAEAGAAMLHLHA--RDPLNGRPSQDPDLFMRFLPQLKERTDAILNITTGGGLGMSLDERLAPARAA 105 (311)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHTTTHHHHHHHCCCEEEECSSCSTTCCHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCCcCCCHHHHHHHHHHHHHhCCcEEEECCCCCCCCCHHHHHHHHHhc
Confidence 38999999999999999998888733 22 22433 4556777777777743 444444433 2 235566666665
Q ss_pred ccCeeecccCch------------------H-HHHhhhCC---CCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHH
Q 016599 194 GLTAYNHNLDTS------------------R-EFYSKIIT---TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRV 251 (386)
Q Consensus 194 G~~~v~i~le~~------------------~-~~~~~i~~---~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~ 251 (386)
..+..+++.-+. + ..+..-.. ..+++...+.++.+.+.|+.....+ | +..++.
T Consensus 106 ~Pe~aSln~gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~d~v~~n~~~~i~~~~~~~~e~Gi~pE~e~-f----d~g~l~ 180 (311)
T 3e02_A 106 RPEVASMNMGSLNFNISQAAAKFDTFKFDWERPYLAGTRDFILSNTFSQIERGMTELGASGTRFEFEC-Y----DVGHLY 180 (311)
T ss_dssp CCSEEEEECSCEECBCGGGGGGCSCCSSTTHHHHHHHGGGCEECCCHHHHHHHHHHHHTTTCEEEEEE-C----SHHHHH
T ss_pred CCCeeeecCCCceeccccchhhccccccccchhhcccCCCceecCCHHHHHHHHHHHHHcCCeEEEEE-E----cHHHHH
Confidence 566555443222 1 11111011 3467788888999999999876633 2 455666
Q ss_pred HHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcce-ee-cCcccccChhHHHhhhhcCc
Q 016599 252 GLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMV-RL-SAGRVRFSMPEQALCFLAGA 329 (386)
Q Consensus 252 ~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i-~i-~~g~~~~~~~~~~~~l~~Ga 329 (386)
....++++ |.-...+.+ .|+- |-+. . .+.+++.+..++..+..++|.... .+ ..|+.. -.....++..|.
T Consensus 181 ~~~~l~~~-Gl~~~p~~~-~~vl--Gv~~-g-~~~~~~~L~~~~~~~~~~~~~~~~wsv~~~Gr~~--~p~~~~A~~~GG 252 (311)
T 3e02_A 181 NLAHFVDR-KLVEPPFFL-QCVF--GILG-G-IGADPENLLHMRTIADRLFGQDYYLSVLAAGRHQ--MPFVTMSAILGG 252 (311)
T ss_dssp HHHHHHHT-TSSCSCEEE-EEEE--CCBT-S-CCSCHHHHHHHHHHHHHHHTTSEEEEEEECGGGH--HHHHHHHHHTTC
T ss_pred HHHHHHHc-CCCCCCeEE-EEEe--cCCC-C-CCCCHHHHHHHHHHHHhhCCCCCceEEEeeChhh--HHHHHHHHHcCC
Confidence 65555544 311112222 2332 3221 2 245777777777666455554221 11 122222 233456667777
Q ss_pred cccc-cCCccccCCC-------CChhHHHHHHHHcCCCcCCC
Q 016599 330 NSIF-TGEKLLTTPN-------NDFDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 330 n~~~-~g~~~~t~~~-------~~~~~~~~~i~~~G~~p~~~ 363 (386)
|.=+ .++++...++ .-++..+++++++|+.+...
T Consensus 253 hvRVGlEDnl~~~~G~lA~sNaelV~~~~~i~~~lgr~vATp 294 (311)
T 3e02_A 253 NVRVGLEDSLYSGKGQLATSNAEQVRKIRRIIEELSLDIATP 294 (311)
T ss_dssp EEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCCBCCH
T ss_pred CeEEccCcceecCCCCCCCCHHHHHHHHHHHHHHcCCCCCCH
Confidence 6322 1232222222 24566788999999988764
No 73
>3c6c_A 3-keto-5-aminohexanoate cleavage enzyme; DUF849 family protein, TIM beta/alpha-barrel fold, structura genomics; HET: MSE; 1.72A {Ralstonia eutropha}
Probab=89.93 E-value=12 Score=34.47 Aligned_cols=222 Identities=17% Similarity=0.168 Sum_probs=120.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCC-CCCh-hhHHHHHHHHHHHhhc--CcEEEEecC------C----------
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRK-TNFNQILEYVKDIRDM--GMEVCCTLG------M---------- 181 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~-~ge~-~~~~~l~~~i~~ik~~--g~~i~~t~g------~---------- 181 (386)
.+++||.+.+.++.+.|..-+++=. +++ .|.| ...+.+.+++..|++. ++-+.+|.| -
T Consensus 45 vTpeEIa~~A~~a~~AGAaivHlHv--Rd~~~G~ps~d~~~y~e~~~~IR~~~~d~ii~~TTg~gg~~~g~~~~p~~~~~ 122 (316)
T 3c6c_A 45 ITPAQIADACVEAAKAGASVAHIHV--RDPKTGGGSRDPVLFKEVVDRVRSSGTDIVLNLTCGLGAFLLPDPEDESKALP 122 (316)
T ss_dssp CSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHHHHHHHHHTTTCCCEEEEECCCSEEECEETTEEEEECT
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEee--cCCCCCCcCCCHHHHHHHHHHHHHHCCCeEEEeCCCccccccCcccCcccccc
Confidence 8999999999999999998888733 222 2334 4567788888888864 455555554 1
Q ss_pred -----CCHHHHHHHHHhccCeeecccCchH---HHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHH
Q 016599 182 -----LEKHQAIELKKAGLTAYNHNLDTSR---EFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGL 253 (386)
Q Consensus 182 -----l~~e~l~~Lk~aG~~~v~i~le~~~---~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~ 253 (386)
-.++.+.-+.+...+..++++-+.. ..-+.+. ..+++...+.++.+++.|+.....+ | +..++...
T Consensus 123 ~~~l~~~eeR~~~~~~~~Pe~aSl~~Gs~Nf~~~~~~~v~-~n~~~~i~~~~~~~~e~Gv~pE~e~-f----d~g~l~~~ 196 (316)
T 3c6c_A 123 ESDVVPVAERVKHLEDCLPEIASLDITTGNQVEGKLEFVY-LNTTRTLRAMARRFQELGIKPELEV-F----SPGDILFG 196 (316)
T ss_dssp TCEECCHHHHTHHHHHHCCSEEEEECCCEEEEETTEEEEE-CCCHHHHHHHHHHHHHHTCEEEEEE-S----SHHHHHHH
T ss_pred ccccCCHHHHHHHHHhcCCCeEEeccccccccCCCCceee-cCCHHHHHHHHHHHHHcCCeEEEEE-E----CHHHHHHH
Confidence 1344555555556677665544431 0001111 3578888888999999999876632 2 35555554
Q ss_pred HHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcce-eec-CcccccChhHHHhhhhcCccc
Q 016599 254 LHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMV-RLS-AGRVRFSMPEQALCFLAGANS 331 (386)
Q Consensus 254 l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i-~i~-~g~~~~~~~~~~~~l~~Gan~ 331 (386)
..++++ |. ++.-.+..|+- |-+. . -+.+++.+..++. .+|.... .+. -|+..+ .....++..|.+.
T Consensus 197 ~~l~~~-Gl-l~~p~~~~~vl--Gv~~-g-~p~~p~~L~~~~~----~lp~~~~wsv~g~Gr~q~--p~~~~A~~~GGhv 264 (316)
T 3c6c_A 197 KQLIEE-GL-IDGVPLFQMVL--GVLW-G-APASTETMIYQRN----LIPANAQWAAFGIGRDQM--PMMAQAALLGGNV 264 (316)
T ss_dssp HHHHHT-TC-SCSSCEEEEEC--SCTT-S-CCSCHHHHHHHHT----TSCTTSEEEEECCGGGHH--HHHHHHHHHTCBE
T ss_pred HHHHHc-CC-CCCCceEEEEE--ecCC-C-CCCCHHHHHHHHH----hcCCCCeEEEEecCcchH--HHHHHHHHcCCCe
Confidence 444433 31 22111222221 3222 1 2356777665543 2444221 111 121111 2345566677663
Q ss_pred cc-cCCccccCCC------CChhHHHHHHHHcCCCcCCC
Q 016599 332 IF-TGEKLLTTPN------NDFDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 332 ~~-~g~~~~t~~~------~~~~~~~~~i~~~G~~p~~~ 363 (386)
=+ .++++...++ .-++..+++++++|+.+...
T Consensus 265 RVGlEDnl~~~~G~~AsNa~lV~~a~~i~~~lGr~vATp 303 (316)
T 3c6c_A 265 RVGLEDNLYLSRGVFATNGQLVERARTVIEHLGMSVATP 303 (316)
T ss_dssp EESTTTCCEEETTEECCHHHHHHHHHHHHHHTTCEECCH
T ss_pred EEccccccCCCCCcCCCHHHHHHHHHHHHHHcCCCCCCH
Confidence 21 1222211111 24566688889999887653
No 74
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=89.67 E-value=8.3 Score=33.82 Aligned_cols=160 Identities=14% Similarity=0.113 Sum_probs=92.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC-CCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG-MLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g-~l~~e~l~~Lk~aG~~~v~i 200 (386)
.++++..+.++.+.+.|++-+-+.- + .|. -.+.|+.+++.--.+++-.| .++.+.++...++|.+.+..
T Consensus 43 ~~~~~a~~~a~al~~gGi~~iEvt~--~----t~~----a~e~I~~l~~~~~~~~iGaGTVlt~~~a~~Ai~AGA~fIvs 112 (232)
T 4e38_A 43 DNAEDIIPLGKVLAENGLPAAEITF--R----SDA----AVEAIRLLRQAQPEMLIGAGTILNGEQALAAKEAGATFVVS 112 (232)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--T----STT----HHHHHHHHHHHCTTCEEEEECCCSHHHHHHHHHHTCSEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeC--C----CCC----HHHHHHHHHHhCCCCEEeECCcCCHHHHHHHHHcCCCEEEe
Confidence 4678899999999999999886643 1 122 23445555432111222222 47899999999999998753
Q ss_pred ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCC
Q 016599 201 NLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL 280 (386)
Q Consensus 201 ~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l 280 (386)
. ..+ .+.++.+++.|+.+-.++. |..|+..- .++| .+.+.++ | ...+
T Consensus 113 P-------------~~~----~~vi~~~~~~gi~~ipGv~-----TptEi~~A----~~~G--ad~vK~F---P--a~~~ 159 (232)
T 4e38_A 113 P-------------GFN----PNTVRACQEIGIDIVPGVN-----NPSTVEAA----LEMG--LTTLKFF---P--AEAS 159 (232)
T ss_dssp S-------------SCC----HHHHHHHHHHTCEEECEEC-----SHHHHHHH----HHTT--CCEEEEC---S--TTTT
T ss_pred C-------------CCC----HHHHHHHHHcCCCEEcCCC-----CHHHHHHH----HHcC--CCEEEEC---c--Cccc
Confidence 1 112 2556678888887544322 77776655 3565 6777662 2 2211
Q ss_pred CCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCC
Q 016599 281 QDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGE 336 (386)
Q Consensus 281 ~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~ 336 (386)
..- ..+...+--+|+.-+ +..|-++ ++.....|.+|+..+..|.
T Consensus 160 ------gG~---~~lkal~~p~p~ip~-~ptGGI~--~~n~~~~l~aGa~~~vgGs 203 (232)
T 4e38_A 160 ------GGI---SMVKSLVGPYGDIRL-MPTGGIT--PSNIDNYLAIPQVLACGGT 203 (232)
T ss_dssp ------THH---HHHHHHHTTCTTCEE-EEBSSCC--TTTHHHHHTSTTBCCEEEC
T ss_pred ------cCH---HHHHHHHHHhcCCCe-eeEcCCC--HHHHHHHHHCCCeEEEECc
Confidence 111 333444445565322 2333344 3334667788988776665
No 75
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=89.55 E-value=11 Score=33.77 Aligned_cols=186 Identities=15% Similarity=0.107 Sum_probs=99.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCC-CChh-------------hHHHHHHHHHHHhhc--CcEEE-Ee--cC---
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKT-------------NFNQILEYVKDIRDM--GMEVC-CT--LG--- 180 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~-ge~~-------------~~~~l~~~i~~ik~~--g~~i~-~t--~g--- 180 (386)
+++...+.++.+.+.|++-+-++--..+|. ..|. ..+.++++++++++. .+++. .+ |-
T Consensus 32 ~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~~~v~~~r~~~~~~Pivlm~Y~n~v~~ 111 (271)
T 3nav_A 32 NPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICFELIAQIRARNPETPIGLLMYANLVYA 111 (271)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCTTSCEEEEECHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCCEEEEecCcHHHH
Confidence 567788888888888988777653221111 1111 124778899999853 45542 22 11
Q ss_pred CCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 181 MLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 181 ~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.-.+..++.++++|+|.+.+. .-.+++..+..+.+++.|+.. -+++...-+.+.+....+.
T Consensus 112 ~g~~~f~~~~~~aGvdGvIip-------------Dlp~ee~~~~~~~~~~~gl~~--I~lvap~t~~eri~~i~~~---- 172 (271)
T 3nav_A 112 RGIDDFYQRCQKAGVDSVLIA-------------DVPTNESQPFVAAAEKFGIQP--IFIAPPTASDETLRAVAQL---- 172 (271)
T ss_dssp TCHHHHHHHHHHHTCCEEEET-------------TSCGGGCHHHHHHHHHTTCEE--EEEECTTCCHHHHHHHHHH----
T ss_pred HhHHHHHHHHHHCCCCEEEEC-------------CCCHHHHHHHHHHHHHcCCeE--EEEECCCCCHHHHHHHHHH----
Confidence 123778999999999997762 112344556677889999873 2233223333333333322
Q ss_pred CCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHh-hhhcCccccccCCcc
Q 016599 261 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQAL-CFLAGANSIFTGEKL 338 (386)
Q Consensus 261 ~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~-~l~~Gan~~~~g~~~ 338 (386)
. ..++......-.-|.. ...+ .+...++...|...+. ++..| +++....+.. .+..||+.++.|..+
T Consensus 173 ~--~gfiY~vs~~GvTG~~----~~~~-~~~~~~v~~vr~~~~~---Pv~vG-fGIst~e~~~~~~~~gADgvIVGSAi 240 (271)
T 3nav_A 173 G--KGYTYLLSRAGVTGAE----TKAN-MPVHALLERLQQFDAP---PALLG-FGISEPAQVKQAIEAGAAGAISGSAV 240 (271)
T ss_dssp C--CSCEEECCCC------------CC-HHHHHHHHHHHHTTCC---CEEEC-SSCCSHHHHHHHHHTTCSEEEESHHH
T ss_pred C--CCeEEEEeccCCCCcc----cCCc-hhHHHHHHHHHHhcCC---CEEEE-CCCCCHHHHHHHHHcCCCEEEECHHH
Confidence 2 2233332222222332 1112 3445666666665521 22221 2343333455 788999999999743
No 76
>3gk0_A PNP synthase, pyridoxine 5'-phosphate synthase; decode, ssgcid, niaid, SBRI, cytoplasm, pyridoxine biosynthesis, transferase; HET: DXP; 2.28A {Burkholderia pseudomallei}
Probab=89.43 E-value=1.2 Score=39.73 Aligned_cols=118 Identities=12% Similarity=0.181 Sum_probs=76.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEe----------cccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHh
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMG----------AAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~----------~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
.+|+++.+...+ ...++++ ||+. . ....+.+.+.++.+++.|+.+++-.. -+.+.++.-++.
T Consensus 104 t~emi~ial~~k---P~~vtLVPEkreE~TTegGlD-v---~~~~~~L~~~i~~L~~~GIrVSLFID-pd~~qI~aA~~~ 175 (278)
T 3gk0_A 104 TPEMLDIACEIR---PHDACLVPEKRSELTTEGGLD-V---VGHFDAVRAACKQLADAGVRVSLFID-PDEAQIRAAHET 175 (278)
T ss_dssp SHHHHHHHHHHC---CSEEEECCCSGGGBCSSSSBC-T---TTTHHHHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHH
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCCcCCCcchh-h---hccHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHh
Confidence 457776665543 4677776 2221 1 23568899999999999998654332 468899999999
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHH
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGL 253 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~ 253 (386)
|.++|-+.-..+.+.+..-.....+++..++.+.+++.|+.|++ |+|-+.+.+..+
T Consensus 176 GAd~IELhTG~YA~a~~~~~~~~el~rl~~aA~~A~~lGL~VnA----GHGL~y~Nv~~i 231 (278)
T 3gk0_A 176 GAPVIELHTGRYADAHDAAEQQREFERIATGVDAGIALGLKVNA----GHGLHYTNVQAI 231 (278)
T ss_dssp TCSEEEECCHHHHTCSSHHHHHHHHHHHHHHHHHHHHTTCEEEE----CTTCCTTTHHHH
T ss_pred CcCEEEEecchhhccCCchhHHHHHHHHHHHHHHHHHcCCEEec----CCCCCHHHHHHH
Confidence 99999875433311010000112466777788888999998887 566666665533
No 77
>3lot_A Uncharacterized protein; protein of unknown function, structural genomics, joint CENT structural genomics, JCSG; HET: MSE; 1.89A {Archaeoglobus fulgidus}
Probab=89.41 E-value=13 Score=34.19 Aligned_cols=227 Identities=18% Similarity=0.200 Sum_probs=124.8
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCC-CCCh-hhHHHHHHHHHHHhhc-CcEEEEecC-C--C---CHHHHHHHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRK-TNFNQILEYVKDIRDM-GMEVCCTLG-M--L---EKHQAIELK 191 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~-~ge~-~~~~~l~~~i~~ik~~-g~~i~~t~g-~--l---~~e~l~~Lk 191 (386)
..+++||.+.+.++.+.|..-+++-. +++ .|.| ...+.+.+++..|++. ++-+.+|.| . . .++.+..+.
T Consensus 28 PvTpeEia~~A~~~~~AGAaivHlHv--Rdp~dG~ps~d~~~y~e~i~~IR~~~d~iI~~TTgg~~~~~~~~eeR~~~~~ 105 (314)
T 3lot_A 28 PVTPDQIVEEAVKAAEAGAGMVHIHA--RDPKDGRPTTDVEVFRYICREIKKQSDVVINVTTGGGGTLGIPVEERAKVVP 105 (314)
T ss_dssp CCSHHHHHHHHHHHHHHTCSEEEECE--ECTTTCCEECCHHHHHHHHHHHHHHCCCEEEECSSTTGGGTCCHHHHTTHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEEee--cCCCCCCcCCCHHHHHHHHHHHHhcCCeEEEeCCCCcCCCCCCHHHHHHHHH
Confidence 38999999999999999998887733 222 2433 4556777777777743 444555543 2 2 344555555
Q ss_pred HhccCeeecccCch------------------HHHH-----hhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHH
Q 016599 192 KAGLTAYNHNLDTS------------------REFY-----SKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEE 248 (386)
Q Consensus 192 ~aG~~~v~i~le~~------------------~~~~-----~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~e 248 (386)
+...+..+++.-+. +..| +.+- ..+++...+.++.+.+.|++...-+ | +..
T Consensus 106 ~~~Pe~aSln~Gs~Nf~~~~~~~~~~~~~~~~e~~~~~~~~~~v~-~N~~~~i~~~~~~~~e~Gi~pE~e~-f----d~g 179 (314)
T 3lot_A 106 ALKPEIATFNMGSMNFAIHPLLKKYKEFKYDWEPEYLEMTRDIVF-RNTFKDLEALSRIFKENDTKPELEC-Y----DIG 179 (314)
T ss_dssp HHCCSEEEEECCCEECBCTTHHHHCCCCSSTHHHHHHHHGGGCEE-CCCHHHHHHHHHHHHHHTCEEEEEE-C----SHH
T ss_pred hcCCceeeecCCCcccccccccccccccccccchhhcccCCCcee-cCCHHHHHHHHHHHHHcCCEEEEEE-E----CHH
Confidence 55555555444221 1111 1121 2378888888999999999866532 3 455
Q ss_pred HHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCC--Ccceeec-CcccccChhHHHhhh
Q 016599 249 DRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMP--KAMVRLS-AGRVRFSMPEQALCF 325 (386)
Q Consensus 249 d~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp--~~~i~i~-~g~~~~~~~~~~~~l 325 (386)
++.....++++ |.-.....+ .|+- |-+. . -+.+++.+..++..+..+++ +....+. .|+.. -.....++
T Consensus 180 ~l~~~~~l~~~-Gll~~p~~~-~~Vl--Gv~~-G-~~~~p~~L~~~~~~~~~l~~~~~~~Wsv~g~Gr~q--~p~~~~A~ 251 (314)
T 3lot_A 180 QIYNTAFMFHE-GYLEPPLRL-QFIH--GILG-G-IGTAVEDVLFMKQTADRLIGRENYTWSLVGAGRFQ--MPLGTLAV 251 (314)
T ss_dssp HHHHHHHHHHT-TCSCSSEEE-EEEE--CCBT-S-CCCCHHHHHHHHHHHHHHTCGGGEEEEEEECGGGH--HHHHHHHH
T ss_pred HHHHHHHHHHC-CCCCCCceE-EEEe--cCCC-C-CCCCHHHHHHHHHHhhhccCCCCCeEEEEecChhh--HHHHHHHH
Confidence 66555555543 311112222 2221 3221 1 24577877777776655555 3211111 12221 23445667
Q ss_pred hcCccccc-cCCccccCCC-------CChhHHHHHHHHcCCCcCCC
Q 016599 326 LAGANSIF-TGEKLLTTPN-------NDFDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 326 ~~Gan~~~-~g~~~~t~~~-------~~~~~~~~~i~~~G~~p~~~ 363 (386)
..|.|.=+ .++++...++ .-++..+++++++|+.+...
T Consensus 252 ~~GGhvRVGlEDnl~~~~G~lA~sNa~lV~~~~~i~~~lGr~vATp 297 (314)
T 3lot_A 252 IMGGDVRVGLEDSLYIERGKLAKSNAEQVEKMVRIVKELGKRPATP 297 (314)
T ss_dssp HTTCEEEESTTTCSEEETTEECSCHHHHHHHHHHHHHHTTCEECCH
T ss_pred HcCCceEEccCcccccCCCCCCCCHHHHHHHHHHHHHHcCCCCCCH
Confidence 77777322 1232222222 24567788999999988654
No 78
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=89.16 E-value=4.7 Score=37.69 Aligned_cols=120 Identities=14% Similarity=0.171 Sum_probs=74.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCC--------C-----CC---------hhhHHHHHHHHHHHhhcCcEEEEecC
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDT--------I-----GR---------KTNFNQILEYVKDIRDMGMEVCCTLG 180 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~--------~-----ge---------~~~~~~l~~~i~~ik~~g~~i~~t~g 180 (386)
+.|...+.++.+++.|++-+-++.-...+ + +. .+..+++..+.+..++.|+.+.+++
T Consensus 33 s~e~a~~li~~ak~aGadavKfq~~k~~tl~s~~~~~fq~~~~~~~~y~~~~~~~l~~e~~~~L~~~~~~~Gi~~~st~- 111 (349)
T 2wqp_A 33 SLKTAFEMVDAAYNAGAEVVKHQTHIVEDEMSDEAKQVIPGNADVSIYEIMERCALNEEDEIKLKEYVESKGMIFISTL- 111 (349)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEECCHHHHCCGGGGGCCCTTCSSCHHHHHHHHCCCHHHHHHHHHHHHHTTCEEEEEE-
T ss_pred CHHHHHHHHHHHHHhCCCEEeeeecccccccCcchhccccCCCCccHHHHHHHhCCCHHHHHHHHHHHHHhCCeEEEee-
Confidence 68899999999999999988776211000 0 00 0234666666677778899987765
Q ss_pred CCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 181 MLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 181 ~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.+.++.|.+.|++.+.|+---. .+ +.-++.+.+.|.++-. =-|+. |.+|+...++.+..-
T Consensus 112 -~d~~svd~l~~~~v~~~KI~S~~~----------~n----~~LL~~va~~gkPviL--stGma-t~~Ei~~Ave~i~~~ 173 (349)
T 2wqp_A 112 -FSRAAALRLQRMDIPAYKIGSGEC----------NN----YPLIKLVASFGKPIIL--STGMN-SIESIKKSVEIIREA 173 (349)
T ss_dssp -CSHHHHHHHHHHTCSCEEECGGGT----------TC----HHHHHHHHTTCSCEEE--ECTTC-CHHHHHHHHHHHHHH
T ss_pred -CCHHHHHHHHhcCCCEEEECcccc----------cC----HHHHHHHHhcCCeEEE--ECCCC-CHHHHHHHHHHHHHc
Confidence 679999999999999998843111 01 1233444444544211 11222 666776666666655
Q ss_pred C
Q 016599 261 P 261 (386)
Q Consensus 261 ~ 261 (386)
|
T Consensus 174 G 174 (349)
T 2wqp_A 174 G 174 (349)
T ss_dssp T
T ss_pred C
Confidence 4
No 79
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=89.02 E-value=2.1 Score=36.87 Aligned_cols=196 Identities=16% Similarity=0.190 Sum_probs=91.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecc-cCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCC-HHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLE-KHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g-~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~-~e~l~~Lk~aG~~~v~ 199 (386)
++..+.+.++.+.+.|++.+.+.-- +.. +.....-.+.++++++. +..+.+.....+ ++.++.+.++|++.+.
T Consensus 14 D~~~~~~~~~~~~~~G~~~i~~~~~dg~~----~~~~~~g~~~i~~i~~~~~~~~~v~l~v~d~~~~i~~~~~~gad~v~ 89 (220)
T 2fli_A 14 DYANFASELARIEETDAEYVHIDIMDGQF----VPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFAQAGADIMT 89 (220)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEEEEBSSS----SSCBCBCHHHHHHHHTTCCSEEEEEEESSSGGGGHHHHHHHTCSEEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeecCCC----CCccccCHHHHHHHHHhCCCCEEEEEeecCHHHHHHHHHHcCCCEEE
Confidence 3345566666777788887655321 110 11111124556666643 445433333223 3357999999999998
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTP 279 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~ 279 (386)
+..+.. .... +.++.+++.|..+...+ ... |..+. ++.+.. ..+.+-+....| |..
T Consensus 90 vh~~~~----------~~~~---~~~~~~~~~g~~i~~~~--~~~-t~~e~---~~~~~~---~~d~vl~~~~~~--g~~ 145 (220)
T 2fli_A 90 IHTEST----------RHIH---GALQKIKAAGMKAGVVI--NPG-TPATA---LEPLLD---LVDQVLIMTVNP--GFG 145 (220)
T ss_dssp EEGGGC----------SCHH---HHHHHHHHTTSEEEEEE--CTT-SCGGG---GGGGTT---TCSEEEEESSCT--TCS
T ss_pred EccCcc----------ccHH---HHHHHHHHcCCcEEEEE--cCC-CCHHH---HHHHHh---hCCEEEEEEECC--CCc
Confidence 754331 2222 44555666786644333 112 22222 111122 245554433333 222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCC----CcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHH
Q 016599 280 LQDQKPVEIWEMIRMIATARIVMP----KAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 355 (386)
Q Consensus 280 l~~~~~~s~~e~~~~~a~~R~~lp----~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~ 355 (386)
-....+...++ +...|.+.+ +..+-+.+| ++ ++.-.....+||+.+..|..+... .++.+..+.+++
T Consensus 146 g~~~~~~~~~~----i~~~~~~~~~~~~~~~i~v~GG-I~--~~~~~~~~~~Gad~vvvGsai~~~--~d~~~a~~~~~~ 216 (220)
T 2fli_A 146 GQAFIPECLEK----VATVAKWRDEKGLSFDIEVDGG-VD--NKTIRACYEAGANVFVAGSYLFKA--SDLVSQVQTLRT 216 (220)
T ss_dssp SCCCCGGGHHH----HHHHHHHHHHTTCCCEEEEESS-CC--TTTHHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHHH
T ss_pred ccccCHHHHHH----HHHHHHHHHhcCCCceEEEECc-CC--HHHHHHHHHcCCCEEEEChHHhCC--CCHHHHHHHHHH
Confidence 11111111222 222222221 222233333 22 222234667799999888744332 456666555543
No 80
>3ajx_A 3-hexulose-6-phosphate synthase; HPS, OMPDC suprafamily, LYA; 1.60A {Mycobacterium gastri}
Probab=88.80 E-value=10 Score=32.14 Aligned_cols=189 Identities=15% Similarity=0.112 Sum_probs=97.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCC-H-HHHHHHHHhccCe
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLE-K-HQAIELKKAGLTA 197 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~-~-e~l~~Lk~aG~~~ 197 (386)
.+.++.++.++.+.. |+.-+.+.- +.....=.+.++.+++. +..+.+.....+ . ..++.+.++|+|.
T Consensus 10 ~~~~~~~~~~~~~~~-~v~~iev~~--------~~~~~~g~~~i~~l~~~~~~~~i~~~l~~~di~~~~~~~a~~~Gad~ 80 (207)
T 3ajx_A 10 LSTEAALELAGKVAE-YVDIIELGT--------PLIKAEGLSVITAVKKAHPDKIVFADMKTMDAGELEADIAFKAGADL 80 (207)
T ss_dssp SCHHHHHHHHHHHGG-GCSEEEECH--------HHHHHHCTHHHHHHHHHSTTSEEEEEEEECSCHHHHHHHHHHTTCSE
T ss_pred CCHHHHHHHHHHhhc-cCCEEEECc--------HHHHhhCHHHHHHHHHhCCCCeEEEEEEecCccHHHHHHHHhCCCCE
Confidence 478888888888876 777666632 22233334566666644 556543332233 3 4488999999999
Q ss_pred eecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeE-eeeeeeec-
Q 016599 198 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESV-PINALLAV- 275 (386)
Q Consensus 198 v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v-~~~~f~P~- 275 (386)
+.+.....+ +..-++++.+++.|+.+.+.+ .. -.|.++..+. +.+++ ++.+ .+..+.|.
T Consensus 81 v~vh~~~~~------------~~~~~~~~~~~~~g~~~gv~~-~s-~~~p~~~~~~---~~~~g--~d~v~~~~~~~~~~ 141 (207)
T 3ajx_A 81 VTVLGSADD------------STIAGAVKAAQAHNKGVVVDL-IG-IEDKATRAQE---VRALG--AKFVEMHAGLDEQA 141 (207)
T ss_dssp EEEETTSCH------------HHHHHHHHHHHHHTCEEEEEC-TT-CSSHHHHHHH---HHHTT--CSEEEEECCHHHHT
T ss_pred EEEeccCCh------------HHHHHHHHHHHHcCCceEEEE-ec-CCChHHHHHH---HHHhC--CCEEEEEecccccc
Confidence 986544321 122345566777788753222 11 2255553333 23444 6666 33333332
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHH
Q 016599 276 KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 355 (386)
Q Consensus 276 ~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~ 355 (386)
+|. .+.. +.++ ..... +..+-+.+| .+++.....+.+||+.+..|..+... .++.+..+.+++
T Consensus 142 ~g~-----~~~~--~~i~--~~~~~---~~pi~v~GG---I~~~~~~~~~~aGad~vvvGsaI~~~--~dp~~~~~~~~~ 204 (207)
T 3ajx_A 142 KPG-----FDLN--GLLA--AGEKA---RVPFSVAGG---VKVATIPAVQKAGAEVAVAGGAIYGA--ADPAAAAKELRA 204 (207)
T ss_dssp STT-----CCTH--HHHH--HHHHH---TSCEEEESS---CCGGGHHHHHHTTCSEEEESHHHHTS--SSHHHHHHHHHH
T ss_pred cCC-----CchH--HHHH--HhhCC---CCCEEEECC---cCHHHHHHHHHcCCCEEEEeeeccCC--CCHHHHHHHHHH
Confidence 122 1211 2222 11111 222333332 22333455688999999888644322 245555555543
No 81
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=88.57 E-value=4.5 Score=35.39 Aligned_cols=200 Identities=11% Similarity=0.093 Sum_probs=98.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE-ecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCC-HHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCM-GAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLE-KHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l-~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~-~e~l~~Lk~aG~~~v 198 (386)
+.-.+.++++.+.+.|++.+++ +..++.. | ++..=...++.+++. ...+-+..-..+ ...++.+.+ .|.+
T Consensus 16 D~~~l~~~i~~~~~~g~d~iHvDvmDg~fv---p-n~t~G~~~v~~lr~~~p~~~~dvhLmv~dp~~~i~~~~~--Ad~i 89 (227)
T 1tqx_A 16 NISKLAEETQRMESLGAEWIHLDVMDMHFV---P-NLSFGPPVINNLKKYTKSIFFDVHLMVEYPEKYVPLLKT--SNQL 89 (227)
T ss_dssp CGGGHHHHHHHHHHTTCSEEEEEEEBSSSS---S-CBCCCHHHHHHHGGGCSSCEEEEEEESSCGGGGGGGCTT--SSEE
T ss_pred ChhhHHHHHHHHHHcCCCEEEEEEEeCCcC---c-chhcCHHHHHHHHHhCCCCcEEEEEEEcCHHHHHHHHHh--CCEE
Confidence 3344555666666778876544 1111210 1 111112455666643 233322221122 234455555 7888
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCC
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGT 278 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT 278 (386)
.+..++.+ .+..+.++..+.+++.|+++...+ ..+...+. ++.+..++ .++.+-+....| |.
T Consensus 90 tvH~ea~~---------~~~~~~i~~~~~i~~~G~k~gval--np~tp~~~----~~~~l~~g-~~D~VlvmsV~p--Gf 151 (227)
T 1tqx_A 90 TFHFEALN---------EDTERCIQLAKEIRDNNLWCGISI--KPKTDVQK----LVPILDTN-LINTVLVMTVEP--GF 151 (227)
T ss_dssp EEEGGGGT---------TCHHHHHHHHHHHHTTTCEEEEEE--CTTSCGGG----GHHHHTTT-CCSEEEEESSCT--TC
T ss_pred EEeecCCc---------cCHHHHHHHHHHHHHcCCeEEEEe--CCCCcHHH----HHHHhhcC-CcCEEEEeeecc--CC
Confidence 87776631 123333332228889998876654 23333222 23333432 267777777665 33
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHH
Q 016599 279 PLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 355 (386)
Q Consensus 279 ~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~ 355 (386)
.-....+ ..+..+...|.+.++..+.+.+| ++.+.......+|||.++.|.. ... ..++.+..+.+++
T Consensus 152 ~gq~f~~----~~l~ki~~lr~~~~~~~I~VdGG---I~~~ti~~~~~aGAd~~V~Gsa-If~-~~d~~~~i~~l~~ 219 (227)
T 1tqx_A 152 GGQSFMH----DMMGKVSFLRKKYKNLNIQVDGG---LNIETTEISASHGANIIVAGTS-IFN-AEDPKYVIDTMRV 219 (227)
T ss_dssp SSCCCCG----GGHHHHHHHHHHCTTCEEEEESS---CCHHHHHHHHHHTCCEEEESHH-HHT-CSSHHHHHHHHHH
T ss_pred CCcccch----HHHHHHHHHHHhccCCeEEEECC---CCHHHHHHHHHcCCCEEEEeHH-HhC-CCCHHHHHHHHHH
Confidence 2111112 22333444555555444555543 4455556788899999998863 332 2346665555543
No 82
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=88.00 E-value=15 Score=33.23 Aligned_cols=180 Identities=14% Similarity=0.177 Sum_probs=107.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec----CCCC-HH---HHHHHHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GMLE-KH---QAIELKK 192 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~----g~l~-~e---~l~~Lk~ 192 (386)
..+.++|.+.++++.+.|+..||+. |.+.+...+ .++..++.+++-. |..+ .. ..+...+
T Consensus 70 ~~T~~dI~~lc~eA~~~g~aaVCV~---------P~~V~~a~~---~L~~s~V~V~tVigFP~G~~~~~~Kv~Ea~~Ai~ 137 (288)
T 3oa3_A 70 SATGSQIDVLCAEAKEYGFATVCVR---------PDYVSRAVQ---YLQGTQVGVTCVIGFHEGTYSTDQKVSEAKRAMQ 137 (288)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHHH---HTTTSSCEEEEEESTTTSCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHH---HcCCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHH
Confidence 3789999999999999999999884 333333333 3455567765433 3222 22 2334456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc-CCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA-GINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~-Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
.|.|.|.+-++.. .+ ..++++.+.+-|+.++++ +-. ..-+|+=. --+.+++....+...+.| .++|.-.
T Consensus 138 ~GAdEIDmVINig-----~l-k~g~~~~v~~eI~~V~~a~~~~-~lKVIlEt~~Lt~eei~~A~~ia~eaG--ADfVKTS 208 (288)
T 3oa3_A 138 NGASELDMVMNYP-----WL-SEKRYTDVFQDIRAVRLAAKDA-ILKVILETSQLTADEIIAGCVLSSLAG--ADYVKTS 208 (288)
T ss_dssp TTCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTS-EEEEECCGGGCCHHHHHHHHHHHHHTT--CSEEECC
T ss_pred cCCCEEEEEeehh-----hh-cCCcHHHHHHHHHHHHHHhcCC-CceEEEECCCCCHHHHHHHHHHHHHcC--CCEEEcC
Confidence 6999988644332 01 245788888888877775 322 24455433 247888988889999997 7777664
Q ss_pred e-eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCcccc
Q 016599 271 A-LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 332 (386)
Q Consensus 271 ~-f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~ 332 (386)
. |.+ ...+.++..-|....+..-++.-+..++|--++ +.....+.+||+++
T Consensus 209 TGf~~---------~GAT~edv~lmr~~v~~~g~~v~VKAAGGIrt~--edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 209 TGFNG---------PGASIENVSLMSAVCDSLQSETRVKASGGIRTI--EDCVKMVRAGAERL 260 (288)
T ss_dssp CSSSS---------CCCCHHHHHHHHHHHHHSSSCCEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred CCCCC---------CCCCHHHHHHHHHHHHHhCCCceEEEeCCCCCH--HHHHHHHHcCCcee
Confidence 2 221 234556543333333322344445555543222 34566778999977
No 83
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=87.32 E-value=15 Score=32.70 Aligned_cols=157 Identities=11% Similarity=0.125 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHh--ccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKA--GLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~a--G~~~v 198 (386)
.+.+.+++.+++..+.|.+-+-+.+|.. .. ..-+.+..++..+++. ++.+++ .....+.++.-.++ |.+-|
T Consensus 22 ~~~~~a~~~a~~~v~~GAdiIDIg~g~~-~v---~~~ee~~rvv~~i~~~~~~pisI--DT~~~~v~~aAl~a~~Ga~iI 95 (262)
T 1f6y_A 22 RDPAPVQEWARRQEEGGARALDLNVGPA-VQ---DKVSAMEWLVEVTQEVSNLTLCL--DSTNIKAIEAGLKKCKNRAMI 95 (262)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEBCC--------CHHHHHHHHHHHHHTTCCSEEEE--ECSCHHHHHHHHHHCSSCEEE
T ss_pred CCHHHHHHHHHHHHHCCCcEEEECCCCC-CC---ChHHHHHHHHHHHHHhCCCeEEE--eCCCHHHHHHHHhhCCCCCEE
Confidence 6899999999999999998887766422 11 2345555556656543 555544 44678888888887 87776
Q ss_pred e-cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEE--eecCCCHHHH----HHHHHHHhcCCCCCCeEeeee
Q 016599 199 N-HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI--IGLGEAEEDR----VGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 199 ~-i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i--~Glget~ed~----~~~l~~l~~l~~~~~~v~~~~ 271 (386)
+ ++.. .+..-+.+..+.+.|..+..--+ -|..+|.++. .+.++.+.+.|...+.+.+-
T Consensus 96 Ndvs~~--------------~d~~~~~~~~~a~~~~~vvlmh~~~~G~p~t~~~~~~~~~~~~~~a~~~Gi~~~~IilD- 160 (262)
T 1f6y_A 96 NSTNAE--------------REKVEKLFPLAVEHGAALIGLTMNKTGIPKDSDTRLAFAMELVAAADEFGLPMEDLYID- 160 (262)
T ss_dssp EEECSC--------------HHHHHHHHHHHHHTTCEEEEESCCSSCSCSSHHHHHHHHHHHHHHHHHHTCCGGGEEEE-
T ss_pred EECCCC--------------cccHHHHHHHHHHhCCcEEEEcCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCcccEEEe-
Confidence 6 3321 22223556677888987444333 3444555555 44455555665322344443
Q ss_pred eeecCCCC-CCCCCCCCHHHHHHHHHHHHHhC-CC
Q 016599 272 LLAVKGTP-LQDQKPVEIWEMIRMIATARIVM-PK 304 (386)
Q Consensus 272 f~P~~gT~-l~~~~~~s~~e~~~~~a~~R~~l-p~ 304 (386)
||.- +.. ..-...+.++.+...+..+ |.
T Consensus 161 ----Pg~g~~g~-~~~~~~~~l~~l~~l~~~~~pg 190 (262)
T 1f6y_A 161 ----PLILPANV-AQDHAPEVLKTLQQIKMLADPA 190 (262)
T ss_dssp ----CCCCCTTT-CTTHHHHHHHHHHHHHTCCSSC
T ss_pred ----CCCCcCCC-ChHHHHHHHHHHHHHHHHhCCC
Confidence 3331 221 1113345566666666544 44
No 84
>3chv_A Prokaryotic domain of unknown function (DUF849) W barrel fold; TIM barrel fold, structural genomics, joint center for struc genomics; HET: MSE; 1.45A {Silicibacter pomeroyi dss-3} PDB: 3fa5_A
Probab=87.12 E-value=17 Score=32.86 Aligned_cols=223 Identities=11% Similarity=0.029 Sum_probs=119.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh-hhHHHHHHHHHHHhhc--CcEEEEecCCC---CHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDM--GMEVCCTLGML---EKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~-~~~~~l~~~i~~ik~~--g~~i~~t~g~l---~~e~l~~Lk~aG~ 195 (386)
.+++||.+.+.++.+.|..-+++-. +++.|.| ...+.+.+++..+++. ++-+.+|.|-. .++.+..+ +...
T Consensus 31 vTpeEia~~A~~~~~AGAaivHlH~--Rd~~G~ps~d~~~~~e~~~~IR~~~pd~ii~~TTgg~~~~~eeR~~~~-~~~P 107 (284)
T 3chv_A 31 ITVSEQVESTQEAFEAGAAIAHCHV--RNDDGTPSSDPDRFARLTEGLHTHCPGMIVQFSTGGRSGAGQARGGML-PLKP 107 (284)
T ss_dssp CSHHHHHHHHHHHHHHTCCEEEECE--ECTTSCEECCHHHHHHHHHHHHHHSTTCEEEECCCTTTCCGGGGGTTG-GGCC
T ss_pred CCHHHHHHHHHHHHHcCCcEEEeee--cCCCCCcCCCHHHHHHHHHHHHHhCCCeEEEeCCCCCCCCHHHHHHhh-hcCC
Confidence 8999999999999999998888743 2322444 4567778888888754 45565554322 23334444 4455
Q ss_pred CeeecccCchH-HHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeee
Q 016599 196 TAYNHNLDTSR-EFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLA 274 (386)
Q Consensus 196 ~~v~i~le~~~-~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P 274 (386)
+..++++-+.. . +.+- ..+++...+.++.+++.|+.....+ | +..++.....++++ |. ++.-.+..|+-
T Consensus 108 e~aSl~~Gs~Nf~--~~v~-~n~~~~~~~~~~~~~e~Gv~pE~e~-f----d~g~l~~~~~l~~~-Gl-l~~p~~~~~vl 177 (284)
T 3chv_A 108 DMASLSVGSNNFP--SRVY-ENPPDLVDWLAAQMRSYRVTPEIEA-F----DLSHILRAIDMHGR-GL-LYGKLYVQFVM 177 (284)
T ss_dssp SEEEECCSCEECS--SSEE-CCCHHHHHHHHHHHHHHTCEEEEEE-S----SHHHHHHHHHHHHT-TC-SCSSCEEEEEE
T ss_pred CEEEecCcccccC--Cccc-cCCHHHHHHHHHHHHHcCCEEEEEE-E----CHHHHHHHHHHHHc-CC-CCCCceEEEEE
Confidence 66665554431 0 1111 2468888888999999999876632 2 34555555444433 31 11111122221
Q ss_pred cCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeec-CcccccChhHHHhhhhcCccccc-cCCccccCCC-------CC
Q 016599 275 VKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLS-AGRVRFSMPEQALCFLAGANSIF-TGEKLLTTPN-------ND 345 (386)
Q Consensus 275 ~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~-~g~~~~~~~~~~~~l~~Gan~~~-~g~~~~t~~~-------~~ 345 (386)
|-+. . -+.+++.+..++.....-.|.....+. -|+..+ .....++..|.+.=+ .++++...++ .-
T Consensus 178 --Gv~~-g-~~~~~~~L~~~~~~~p~~~~~~~ws~~g~Gr~q~--p~~~~A~~~GGhvRVGlEDnl~~~~G~~A~sNa~l 251 (284)
T 3chv_A 178 --GVKN-A-MPADREVFDFYVRMMRTRAPQAEWCAAGIGANQL--TVNEWAIAAGGHTRTGLEDNIRLDRQTLAPSNAAL 251 (284)
T ss_dssp --CCTT-S-CCCCHHHHHHHHHHHHHHCTTSEEEEEECTTHHH--HHHHHHHHTTCEEEESTTTCCBSSSSCBCCCHHHH
T ss_pred --ecCC-C-CCCCHHHHHHHHHhccCCCCCceEEEEecCcchh--HHHHHHHHcCCCeEEecccccCCCCCCCCCCHHHH
Confidence 2211 1 245777777666543221111211111 111111 234556677777322 1232222222 13
Q ss_pred hhHHHHHHHHcCCCcCCC
Q 016599 346 FDADQLMFKVLGLTPKAP 363 (386)
Q Consensus 346 ~~~~~~~i~~~G~~p~~~ 363 (386)
++...++++++|+.+...
T Consensus 252 V~~~~~i~~~lgr~vAtp 269 (284)
T 3chv_A 252 VRRSVELCDKYQRPVASW 269 (284)
T ss_dssp HHHHHHHHHHTTCCBCCH
T ss_pred HHHHHHHHHHcCCCCCCH
Confidence 566678888999988653
No 85
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=86.49 E-value=12 Score=34.41 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=51.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEE-ecCC--CCHHHHHHHHHhccC
Q 016599 125 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCC-TLGM--LEKHQAIELKKAGLT 196 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~-t~g~--l~~e~l~~Lk~aG~~ 196 (386)
+.+.+.++...+.|.+-+.+.+....+...+...++..+.++.+.+ .++++++ ..|. .+.+.++.-.++|.+
T Consensus 74 ~~~~~~A~~~v~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vplsI~DT~~~~~~~~V~eaal~aga~ 149 (310)
T 2h9a_B 74 NDPVAWAKKCVEYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVPLMIIGCGVEEKDAEIFPVIGEALSG 149 (310)
T ss_dssp TCHHHHHHHHHHTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCceEEEECCCCCCCCHHHHHHHHHhCCC
Confidence 7888888888899999888877544444444566777778888874 3666654 3222 678888888888876
No 86
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=86.14 E-value=12 Score=32.44 Aligned_cols=183 Identities=10% Similarity=0.019 Sum_probs=101.4
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC-CCCHHHHHHHHHhccCeee
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG-MLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g-~l~~e~l~~Lk~aG~~~v~ 199 (386)
..++++....++.+.+-|++-+-++. + .| .-++.|+.+++.--+..+-.| .++.+.++...++|.+.+-
T Consensus 21 ~~~~~~a~~~a~al~~gGi~~iEvt~--~----t~----~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fiv 90 (217)
T 3lab_A 21 IDDLVHAIPMAKALVAGGVHLLEVTL--R----TE----AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIV 90 (217)
T ss_dssp CSCGGGHHHHHHHHHHTTCCEEEEET--T----ST----THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEeC--C----Cc----cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEE
Confidence 36789999999999999998876643 1 12 234555555532112222233 4799999999999998774
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCC--eeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGI--NVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKG 277 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi--~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~g 277 (386)
. |.-+. +.++.+++.|+ .-..-++.|. -|.+|+..- .++| .+.+.++ |.
T Consensus 91 s-------------P~~~~----evi~~~~~~~v~~~~~~~~~PG~-~TptE~~~A----~~~G--ad~vK~F-----Pa 141 (217)
T 3lab_A 91 S-------------PGLTP----ELIEKAKQVKLDGQWQGVFLPGV-ATASEVMIA----AQAG--ITQLKCF-----PA 141 (217)
T ss_dssp E-------------SSCCH----HHHHHHHHHHHHCSCCCEEEEEE-CSHHHHHHH----HHTT--CCEEEET-----TT
T ss_pred e-------------CCCcH----HHHHHHHHcCCCccCCCeEeCCC-CCHHHHHHH----HHcC--CCEEEEC-----cc
Confidence 3 22222 55677777776 1111234444 477776654 4565 6667552 22
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCC----CCChhHHHHHH
Q 016599 278 TPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTP----NNDFDADQLMF 353 (386)
Q Consensus 278 T~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~----~~~~~~~~~~i 353 (386)
..+. . ...+...+-.+|+..+ +..|-++. +.....+.+|+..+..|. .++.. ..+.+++.+..
T Consensus 142 ~~~g------G---~~~lkal~~p~p~i~~-~ptGGI~~--~N~~~~l~aGa~~~vgGs-~l~~~~~i~~~~~~~i~~~a 208 (217)
T 3lab_A 142 SAIG------G---AKLLKAWSGPFPDIQF-CPTGGISK--DNYKEYLGLPNVICAGGS-WLTESKLLIEGDWNEVTRRA 208 (217)
T ss_dssp TTTT------H---HHHHHHHHTTCTTCEE-EEBSSCCT--TTHHHHHHSTTBCCEEES-GGGCHHHHHHTCHHHHHHHH
T ss_pred cccc------C---HHHHHHHHhhhcCceE-EEeCCCCH--HHHHHHHHCCCEEEEECh-hhcChhHHhcCCHHHHHHHH
Confidence 2211 1 2334455556665322 23333443 334566778876665554 44321 23555555544
Q ss_pred HH
Q 016599 354 KV 355 (386)
Q Consensus 354 ~~ 355 (386)
++
T Consensus 209 ~~ 210 (217)
T 3lab_A 209 SE 210 (217)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 87
>3o6c_A PNP synthase, pyridoxine 5'-phosphate synthase; structural genomics, IDP90671, center for structural genomic infectious diseases; HET: MSE; 1.87A {Campylobacter jejuni subsp} SCOP: c.1.24.0 PDB: 3o6d_A*
Probab=85.80 E-value=3.7 Score=36.34 Aligned_cols=121 Identities=14% Similarity=0.115 Sum_probs=75.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeccc----CCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGAAW----RDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~g~----~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.+|+++.+...+ ...++++=-. +..+|=+...+.+.+.++.+++.|+.++.-.. -+.+.++.-++.|.++|-
T Consensus 75 t~emi~ial~~k---P~~vtLVPEkreE~TTegGldv~~~~L~~~i~~L~~~GIrVSLFID-pd~~qi~aA~~~GAd~IE 150 (260)
T 3o6c_A 75 NDEILNLALKLK---PHRVTLVPEKREELTTEGGLCLNHAKLKQSIEKLQNANIEVSLFIN-PSLEDIEKSKILKAQFIE 150 (260)
T ss_dssp CHHHHHHHHHHC---CSEEEECCCSGGGBCTTSSBCTTCTTHHHHHHHHHHTTCEEEEEEC-SCHHHHHHHHHTTCSEEE
T ss_pred CHHHHHHHHHcC---CCEEEECCCCCCccCCCCChhhCHHHHHHHHHHHHHCCCEEEEEeC-CCHHHHHHHHHhCCCEEE
Confidence 357776655543 4577776110 00111112557899999999999998654332 468899999999999998
Q ss_pred cccCchHHHHh----hhCC-------------------CCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHH
Q 016599 200 HNLDTSREFYS----KIIT-------------------TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVG 252 (386)
Q Consensus 200 i~le~~~~~~~----~i~~-------------------~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~ 252 (386)
+.-..+.+.+. .+.+ ...++...++.+.+++.|+.|++ |+|-+.+.+..
T Consensus 151 LhTG~YA~a~~~~~sn~~~~~~~~~~l~~~~~~~~~~~~~el~~l~~aA~~A~~lGL~VnA----GHGL~y~Nv~~ 222 (260)
T 3o6c_A 151 LHTGHYANLHNALFSNISHTAFALKELDQDKKTLQAQFEKELQNLELCAKKGLELGLKVAA----GHGLNYKNVKP 222 (260)
T ss_dssp ECCHHHHHHHHHHHSSGGGSTTCCGGGCSCHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEE----CTTCCTTTTHH
T ss_pred EechHhhhhhhccccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHcCCEEec----CCCCCHHHHHH
Confidence 86655522222 1111 11344555667777888988876 57766666553
No 88
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=85.57 E-value=9.3 Score=35.29 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=75.4
Q ss_pred HHHHHHHHHHH-HcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEe-cC--CCCHHHHHHHHHhccCe--
Q 016599 125 DAVMQAAQKAK-EAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCT-LG--MLEKHQAIELKKAGLTA-- 197 (386)
Q Consensus 125 eeI~~~~~~~~-~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t-~g--~l~~e~l~~Lk~aG~~~-- 197 (386)
+++.+.++... +.|.+-+.+.+..+.+.+.+...+...+.++.+.+ .++++++. .| ..+.+.++.-.++|.+.
T Consensus 80 ~~~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~vPlsIDg~~~~T~~~eV~eaAleagag~~~ 159 (323)
T 4djd_D 80 NEPGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGVPLVVVGCGDVEKDHEVLEAVAEAAAGENL 159 (323)
T ss_dssp TCHHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCSCEEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HhHHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCceEEEECCCCCCCCHHHHHHHHHhcCCCCC
Confidence 45777777777 88999888865444454445556677777888764 46666554 22 35678888888888552
Q ss_pred -ee-cccCchHHHHhhhC---------CCCCHHHHHHHHHHHHHcCCe---eeEeEEee-cCCCHHHHHHHHHHHhc
Q 016599 198 -YN-HNLDTSREFYSKII---------TTRSYDERLETLKHVREAGIN---VCSGGIIG-LGEAEEDRVGLLHTLAT 259 (386)
Q Consensus 198 -v~-i~le~~~~~~~~i~---------~~~s~~~~l~~i~~a~~~Gi~---v~~~~i~G-lget~ed~~~~l~~l~~ 259 (386)
|+ ++.+..++..+.+. ...+.+...+.++.+.++|+. +-.+-.+| +|-+.++-.++++.++.
T Consensus 160 lINsv~~~~~~~m~~laa~~g~~vVlmh~~d~~~~~~l~~~a~~~GI~~e~IIlDPg~g~fgk~~e~~l~~l~~ir~ 236 (323)
T 4djd_D 160 LLGNAEQENYKSLTAACMVHKHNIIARSPLDINICKQLNILINEMNLPLDHIVIDPSIGGLGYGIEYSFSIMERIRL 236 (323)
T ss_dssp EEEEEBTTBCHHHHHHHHHHTCEEEEECSSCHHHHHHHHHHHHTTTCCGGGEEEECCCCCTTTTHHHHHHHHHHHHH
T ss_pred eEEECCcccHHHHHHHHHHhCCeEEEEccchHHHHHHHHHHHHHcCCCHHHEEEeCCCccccCCHHHHHHHHHHHHH
Confidence 22 22221122222111 111333344444556666662 44454555 35566665555555543
No 89
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=85.45 E-value=13 Score=32.24 Aligned_cols=195 Identities=16% Similarity=0.229 Sum_probs=96.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcE----EEEecCCCCHHHHHHHHHhccCee
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GME----VCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~----i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
...+.+.++.+.+.|++-+.+.--+.+.. | ....-.+.++.+++. ... +.+ +. ..+.++.+.++|+|.+
T Consensus 18 ~~~l~~~i~~~~~~Gad~i~l~i~Dg~fv--~-~~~~~~~~~~~lr~~~~~~~~v~lmv-~d--~~~~i~~~~~agad~v 91 (228)
T 1h1y_A 18 FANLAAEADRMVRLGADWLHMDIMDGHFV--P-NLTIGAPVIQSLRKHTKAYLDCHLMV-TN--PSDYVEPLAKAGASGF 91 (228)
T ss_dssp GGGHHHHHHHHHHTTCSEEEEEEEBSSSS--S-CBCBCHHHHHHHHTTCCSEEEEEEES-SC--GGGGHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCcC--c-chhhCHHHHHHHHhhcCCcEEEEEEe-cC--HHHHHHHHHHcCCCEE
Confidence 34455566677778988765531110100 1 001122555556543 222 222 21 2456888889999999
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC--CCCCCeEeeeeeeecC
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL--PTHPESVPINALLAVK 276 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l--~~~~~~v~~~~f~P~~ 276 (386)
.+..+..+ ..+ .+.++.+++.|+.+.. .+... |..+. ++.+... + ++.+.+....|
T Consensus 92 ~vH~~~~~---------~~~---~~~~~~i~~~g~~igv--~~~p~-t~~e~---~~~~~~~~~~--~d~vl~~sv~p-- 149 (228)
T 1h1y_A 92 TFHIEVSR---------DNW---QELIQSIKAKGMRPGV--SLRPG-TPVEE---VFPLVEAENP--VELVLVMTVEP-- 149 (228)
T ss_dssp EEEGGGCT---------TTH---HHHHHHHHHTTCEEEE--EECTT-SCGGG---GHHHHHSSSC--CSEEEEESSCT--
T ss_pred EECCCCcc---------cHH---HHHHHHHHHcCCCEEE--EEeCC-CCHHH---HHHHHhcCCC--CCEEEEEeecC--
Confidence 87654421 111 2555667778877652 22222 32222 2222231 2 56777766655
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHHH
Q 016599 277 GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFKV 355 (386)
Q Consensus 277 gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~ 355 (386)
|+--....+ ..++.+...|.+.++..+-+.+| ++++.......+|||.++.|..+... .++++..+.+++
T Consensus 150 g~~g~~~~~----~~l~~i~~~~~~~~~~pi~v~GG---I~~~ni~~~~~aGaD~vvvGsai~~~--~d~~~~~~~l~~ 219 (228)
T 1h1y_A 150 GFGGQKFMP----EMMEKVRALRKKYPSLDIEVDGG---LGPSTIDVAASAGANCIVAGSSIFGA--AEPGEVISALRK 219 (228)
T ss_dssp TCSSCCCCG----GGHHHHHHHHHHCTTSEEEEESS---CSTTTHHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHHH
T ss_pred CCCcccCCH----HHHHHHHHHHHhcCCCCEEEECC---cCHHHHHHHHHcCCCEEEECHHHHCC--CCHHHHHHHHHH
Confidence 322111111 22333444555554433333443 22333345667799999888644322 345555555543
No 90
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=85.43 E-value=7.7 Score=34.47 Aligned_cols=125 Identities=12% Similarity=0.066 Sum_probs=75.6
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC----CCCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG----MLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g----~l~~e~l~~Lk~aG~~~v 198 (386)
..+.+.+.++.+++.|++.|+|+.= ++ .| ....+.+.++++..+ ++++..+-. .-..+.++.|.+.|+++|
T Consensus 71 E~~~M~~Di~~~~~~GadGvV~G~L-t~-dg-~iD~~~~~~Li~~a~--~~~vTFHRAfD~~~d~~~ale~L~~lG~~rI 145 (256)
T 1twd_A 71 EFAAILEDVRTVRELGFPGLVTGVL-DV-DG-NVDMPRMEKIMAAAG--PLAVTFHRAFDMCANPLYTLNNLAELGIARV 145 (256)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCB-CT-TS-SBCHHHHHHHHHHHT--TSEEEECGGGGGCSCHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeeE-CC-CC-CcCHHHHHHHHHHhC--CCcEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 3566677778888999999988542 11 23 356777888887665 445433311 123667999999999999
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeee
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINAL 272 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f 272 (386)
.-+=.. .+..+-++.++.+.+ ++ .+.+|.|-|-+.+.+.+++ ..| +..+.+..-
T Consensus 146 LTSG~~-----------~~a~~g~~~L~~Lv~~a~---~i~Im~GgGv~~~Ni~~l~----~tG--v~e~H~Sa~ 200 (256)
T 1twd_A 146 LTSGQK-----------SDALQGLSKIMELIAHRD---APIIMAGAGVRAENLHHFL----DAG--VLEVHSSAG 200 (256)
T ss_dssp EECTTS-----------SSTTTTHHHHHHHHTSSS---CCEEEEESSCCTTTHHHHH----HHT--CSEEEECCE
T ss_pred ECCCCC-----------CCHHHHHHHHHHHHHhhC---CcEEEecCCcCHHHHHHHH----HcC--CCeEeECCc
Confidence 753111 112222344455444 34 6778888887777777664 233 455555433
No 91
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=83.49 E-value=4 Score=38.00 Aligned_cols=80 Identities=13% Similarity=0.021 Sum_probs=51.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-cCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-LTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG-~~~v~ 199 (386)
.+.++..+.++.+.+.|+..+.+.++.......+.......+.++.+++ .++++..+.|..+.+.++++.+.| +|.|.
T Consensus 226 ~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~G~aD~V~ 305 (338)
T 1z41_A 226 LDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQNGRADLIF 305 (338)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHTTSCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHcCCceEEe
Confidence 4678888888888888998888866532100000000112445555653 467777766766888888888888 88888
Q ss_pred cc
Q 016599 200 HN 201 (386)
Q Consensus 200 i~ 201 (386)
++
T Consensus 306 iG 307 (338)
T 1z41_A 306 IG 307 (338)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 92
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=83.20 E-value=6 Score=34.79 Aligned_cols=75 Identities=12% Similarity=0.077 Sum_probs=52.1
Q ss_pred HHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCch
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 205 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~ 205 (386)
..+.++.+.+.|++.+.+........+... -.++++.+++ .++++....|..+.+.++.+.++|++.+.++-..+
T Consensus 37 ~~~~a~~~~~~G~~~i~v~d~~~~~~~~~~----~~~~i~~i~~~~~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ig~~~l 112 (247)
T 3tdn_A 37 LRDWVVEVEKRGAGEILLTSIDRDGTKSGY----DTEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLRGADKVSINTAAV 112 (247)
T ss_dssp HHHHHHHHHHTTCSEEEEEETTTTTCSSCC----CHHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEECCSHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEecCcccCCCcc----cHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHHHcCCCeeehhhHHh
Confidence 345566667789999987643211111111 2456677764 57888888899999999999999999999875443
No 93
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=83.00 E-value=12 Score=37.11 Aligned_cols=125 Identities=18% Similarity=0.192 Sum_probs=80.4
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 125 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
++-.+.++.+.+.|++-+++-+.. | .-+..++.++.+|+. .+.+..- +..+.+..+.|.++|+|.+-+++
T Consensus 280 ~d~~eR~~aLv~AGvD~iviD~ah----G---hs~~v~~~i~~ik~~~p~~~viaG-NVaT~e~a~~Li~aGAD~vkVGi 351 (556)
T 4af0_A 280 PGDKDRLKLLAEAGLDVVVLDSSQ----G---NSVYQIEFIKWIKQTYPKIDVIAG-NVVTREQAAQLIAAGADGLRIGM 351 (556)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCSC----C---CSHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHHTCSEEEECS
T ss_pred ccHHHHHHHHHhcCCcEEEEeccc----c---ccHHHHHHHHHHHhhCCcceEEec-cccCHHHHHHHHHcCCCEEeecC
Confidence 345667788889999988885432 2 225678888888865 3444332 23689999999999999998877
Q ss_pred CchHHHHhhhCCC--------CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeee
Q 016599 203 DTSREFYSKIITT--------RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 203 e~~~~~~~~i~~~--------~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~ 271 (386)
-.. .+|.+ .....++++.+.+++.|+++.++-=+ .+.-|+.+-+. .| .+.|-+..
T Consensus 352 GpG-----SiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~vpvIADGGI---~~sGDi~KAla----aG--Ad~VMlGs 414 (556)
T 4af0_A 352 GSG-----SICITQEVMAVGRPQGTAVYAVAEFASRFGIPCIADGGI---GNIGHIAKALA----LG--ASAVMMGG 414 (556)
T ss_dssp SCS-----TTBCCTTTCCSCCCHHHHHHHHHHHHGGGTCCEEEESCC---CSHHHHHHHHH----TT--CSEEEEST
T ss_pred CCC-----cccccccccCCCCcHHHHHHHHHHHHHHcCCCEEecCCc---CcchHHHHHhh----cC--CCEEEEch
Confidence 443 12221 13567778888889999885553211 24556555442 32 45555543
No 94
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=82.76 E-value=12 Score=34.90 Aligned_cols=203 Identities=11% Similarity=0.055 Sum_probs=107.7
Q ss_pred CHHHHHHHHHHHHHcCCc-----EEEEecccCCC---------CCCh---------hhHHHHHHHHHHHhhcCcEEEEec
Q 016599 123 TKDAVMQAAQKAKEAGST-----RFCMGAAWRDT---------IGRK---------TNFNQILEYVKDIRDMGMEVCCTL 179 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~-----~v~l~~g~~~~---------~ge~---------~~~~~l~~~i~~ik~~g~~i~~t~ 179 (386)
+.+-..+.++.+++.|.. .|-||.-...+ .... +..+++..+.+..++.|+.+.+++
T Consensus 19 dle~Ak~lI~~A~~aGad~~~d~avKfQt~~~d~l~~~~~~~~~~~~~~~~~~~~el~~e~~~~L~~~~~~~Gi~~~st~ 98 (350)
T 3g8r_A 19 NVEHGVALIRAIRESCQGFDFDFGFKLQYRNLDTFIHSSFKGRDDVKYVKRFEETRLQPEQMQKLVAEMKANGFKAICTP 98 (350)
T ss_dssp CSHHHHHHHHHHHHHTTTCCSEEEEEEEECCHHHHBCGGGTTCCSSSSHHHHHHTCCCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred cHHHHHHHHHHHHHhCCcccCCeeEEccccchhhhcChhccCccHHHHHHHHHHhcCCHHHHHHHHHHHHHcCCcEEecc
Confidence 456666667777777766 77777421100 0000 233556666666678899987765
Q ss_pred CCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhc
Q 016599 180 GMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLAT 259 (386)
Q Consensus 180 g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~ 259 (386)
.+.+.++.|.+.|++.+.|+---. .++ .-++.+.+.|.++- +=-|+. |.+|+...++++..
T Consensus 99 --fD~~svd~l~~~~v~~~KI~S~~~----------~N~----pLL~~va~~gKPvi--LstGms-tl~Ei~~Ave~i~~ 159 (350)
T 3g8r_A 99 --FDEESVDLIEAHGIEIIKIASCSF----------TDW----PLLERIARSDKPVV--ASTAGA-RREDIDKVVSFMLH 159 (350)
T ss_dssp --CSHHHHHHHHHTTCCEEEECSSST----------TCH----HHHHHHHTSCSCEE--EECTTC-CHHHHHHHHHHHHT
T ss_pred --CCHHHHHHHHHcCCCEEEECcccc----------cCH----HHHHHHHhhCCcEE--EECCCC-CHHHHHHHHHHHHH
Confidence 678999999999999998842111 112 33455555666521 112333 89999999999987
Q ss_pred CCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCccc-ccChhHHHhhhhcCcccc---ccC
Q 016599 260 LPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRV-RFSMPEQALCFLAGANSI---FTG 335 (386)
Q Consensus 260 l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~-~~~~~~~~~~l~~Gan~~---~~g 335 (386)
-+ .+.+-++...-+| .+...--++.+...+..+|...+-.+. .. .-.......++..||.-| ++-
T Consensus 160 ~g--~~viLlhC~s~YP--------t~~~~~nL~aI~~Lk~~fp~lpVG~Sd-Ht~g~~~~~~~AAvAlGA~vIEkH~tl 228 (350)
T 3g8r_A 160 RG--KDLTIMHCVAEYP--------TPDDHLHLARIKTLRQQYAGVRIGYST-HEDPDLMEPIMLAVAQGATVFEKHVGL 228 (350)
T ss_dssp TT--CCEEEEECCCCSS--------CCGGGCCTTHHHHHHHHCTTSEEEEEE-CCCSSCCHHHHHHHHTTCCEEEEEBCC
T ss_pred cC--CCEEEEecCCCCC--------CCcccCCHHHHHHHHHHCCCCCEEcCC-CCCCCccHHHHHHHHcCCCEEEEecCc
Confidence 75 2322222211111 111111234456667777654333320 00 000122346777888744 222
Q ss_pred Ccccc---CCCCChhHHHHHHHH
Q 016599 336 EKLLT---TPNNDFDADQLMFKV 355 (386)
Q Consensus 336 ~~~~t---~~~~~~~~~~~~i~~ 355 (386)
++-.. ....++++..+|+++
T Consensus 229 dr~~g~D~~~Sl~P~ef~~lv~~ 251 (350)
T 3g8r_A 229 PTDQYGINNYSANPEQVRRWLAA 251 (350)
T ss_dssp CBTTBCCCTTCBCHHHHHHHHHH
T ss_pred ccCCCCcccccCCHHHHHHHHHH
Confidence 22111 233577777666654
No 95
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=82.44 E-value=26 Score=31.04 Aligned_cols=202 Identities=14% Similarity=0.149 Sum_probs=108.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCC-CChh-------------hHHHHHHHHHHHhhcCcEEE-Ee--cC---CC
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-GRKT-------------NFNQILEYVKDIRDMGMEVC-CT--LG---ML 182 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~-ge~~-------------~~~~l~~~i~~ik~~g~~i~-~t--~g---~l 182 (386)
+++.-.+.++.+.+.|++-+-++--..++. ..|. ..+.++++++++++. +++. .+ |- .-
T Consensus 26 ~~~~t~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~g~~~~~~~~~~~~~r~~-~Pivlm~Y~N~i~~~G 104 (252)
T 3tha_A 26 NLQTSEAFLQRLDQSPIDILELGVAYSDPIADGEIIADAAKIALDQGVDIHSVFELLARIKTK-KALVFMVYYNLIFSYG 104 (252)
T ss_dssp CHHHHHHHHHTGGGSSCSEEEEECCCSCCCSCCCHHHHHHHHHHHTTCCHHHHHHHHHHCCCS-SEEEEECCHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCcHHHHHHHHHHHHCCCCHHHHHHHHHHHhcC-CCEEEEeccCHHHHhh
Confidence 678888888888889998777753222221 1121 236788888888743 5532 22 10 12
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCC
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPT 262 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~ 262 (386)
.+..++.++++|++.+-+. .-.+++..+..+.++++|+.. -+++...-+. ++. +.+.+..
T Consensus 105 ~e~F~~~~~~aGvdG~Iip-------------DLP~eE~~~~~~~~~~~Gl~~--I~lvaP~t~~-eRi---~~ia~~a- 164 (252)
T 3tha_A 105 LEKFVKKAKSLGICALIVP-------------ELSFEESDDLIKECERYNIAL--ITLVSVTTPK-ERV---KKLVKHA- 164 (252)
T ss_dssp HHHHHHHHHHTTEEEEECT-------------TCCGGGCHHHHHHHHHTTCEE--CEEEETTSCH-HHH---HHHHTTC-
T ss_pred HHHHHHHHHHcCCCEEEeC-------------CCCHHHHHHHHHHHHHcCCeE--EEEeCCCCcH-HHH---HHHHHhC-
Confidence 4778999999999998762 223444456667788999874 2333333333 333 2333332
Q ss_pred CCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccC-
Q 016599 263 HPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTT- 341 (386)
Q Consensus 263 ~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~- 341 (386)
..++.. +...|+-=. ......+...++...|...+ +++..| ++++...+...+..+|+.++.|..+...
T Consensus 165 -~gFiY~---Vs~~GvTG~--~~~~~~~~~~~v~~vr~~~~---~Pv~vG-fGIst~e~a~~~~~~ADGVIVGSAiVk~i 234 (252)
T 3tha_A 165 -KGFIYL---LASIGITGT--KSVEEAILQDKVKEIRSFTN---LPIFVG-FGIQNNQDVKRMRKVADGVIVGTSIVKCF 234 (252)
T ss_dssp -CSCEEE---ECCSCSSSC--SHHHHHHHHHHHHHHHTTCC---SCEEEE-SSCCSHHHHHHHTTTSSEEEECHHHHHHT
T ss_pred -CCeEEE---EecCCCCCc--ccCCCHHHHHHHHHHHHhcC---CcEEEE-cCcCCHHHHHHHHhcCCEEEECHHHHHHH
Confidence 223322 333332211 11112344556666665542 122221 2343444556666789999999754322
Q ss_pred CCCChhHHHHHHHH
Q 016599 342 PNNDFDADQLMFKV 355 (386)
Q Consensus 342 ~~~~~~~~~~~i~~ 355 (386)
...+.++....+++
T Consensus 235 ~~~~~~~~~~~~~~ 248 (252)
T 3tha_A 235 KQGNLDIIMKDIEE 248 (252)
T ss_dssp TSSCHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHH
Confidence 12245555555544
No 96
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=82.32 E-value=3.3 Score=38.65 Aligned_cols=75 Identities=15% Similarity=0.050 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCC----CCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-cC
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDT----IGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-LT 196 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~----~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG-~~ 196 (386)
+.++..+.++.+.+.|++.+.+..|.... .++. ...++++.+++ .++++..+.|..+.+.++++.+.| +|
T Consensus 227 ~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~----~~~~~~~~ik~~~~iPVi~~GgI~s~e~a~~~L~~G~aD 302 (340)
T 3gr7_A 227 TAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPG----YQVPFAELIRREADIPTGAVGLITSGWQAEEILQNGRAD 302 (340)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTT----TTHHHHHHHHHHTTCCEEEESSCCCHHHHHHHHHTTSCS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCcc----ccHHHHHHHHHHcCCcEEeeCCCCCHHHHHHHHHCCCee
Confidence 45667777777777777777665432111 0111 12344455553 356666666666777777777776 77
Q ss_pred eeecc
Q 016599 197 AYNHN 201 (386)
Q Consensus 197 ~v~i~ 201 (386)
.|.++
T Consensus 303 ~V~iG 307 (340)
T 3gr7_A 303 LVFLG 307 (340)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 77764
No 97
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=82.28 E-value=8.4 Score=35.61 Aligned_cols=79 Identities=14% Similarity=0.088 Sum_probs=57.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC------------C---CCChhhHHHHHHHHHHHhh-c--CcEEEEecCCCC
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD------------T---IGRKTNFNQILEYVKDIRD-M--GMEVCCTLGMLE 183 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~------------~---~ge~~~~~~l~~~i~~ik~-~--g~~i~~t~g~l~ 183 (386)
++.+++.+.++.+.+.|++.|.+.+++.. . .| +......++.++.+++ . ++++..+.|..+
T Consensus 222 ~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g-~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~~ 300 (336)
T 1f76_A 222 LSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSG-RPLQLKSTEIIRRLSLELNGRLPIIGVGGIDS 300 (336)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEE-GGGHHHHHHHHHHHHHHHTTSSCEEEESSCCS
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCC-chhHHHHHHHHHHHHHHhCCCCCEEEECCCCC
Confidence 56778888899999999999887654210 0 12 1123455677777764 3 688888889889
Q ss_pred HHHHHHHHHhccCeeecc
Q 016599 184 KHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~ 201 (386)
.+.+.++.++|+|.|.++
T Consensus 301 ~~da~~~l~~GAd~V~ig 318 (336)
T 1f76_A 301 VIAAREKIAAGASLVQIY 318 (336)
T ss_dssp HHHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHHCCCCEEEee
Confidence 888888888999999875
No 98
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=81.92 E-value=9.1 Score=35.13 Aligned_cols=108 Identities=18% Similarity=0.122 Sum_probs=61.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCC-C----ChhhHHHHHHHHHHHhhc-C--cEE--EEec----CCCCH-HH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI-G----RKTNFNQILEYVKDIRDM-G--MEV--CCTL----GMLEK-HQ 186 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~-g----e~~~~~~l~~~i~~ik~~-g--~~i--~~t~----g~l~~-e~ 186 (386)
.+.+++...+..+...|++.|....|+.+.. | .|..+++-.++++.+++. | +.+ ...+ ..-+. ..
T Consensus 83 ~~~~~l~~~L~~~~~~GI~niLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d 162 (310)
T 3apt_A 83 QSRKEVAEVLHRFVESGVENLLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEAD 162 (310)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHH
Confidence 4778999999999999999998777665543 3 122255667777777654 3 333 2322 11222 23
Q ss_pred HHHH---HHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec
Q 016599 187 AIEL---KKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL 243 (386)
Q Consensus 187 l~~L---k~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl 243 (386)
++.| .++|.+.+--- .-.+.+...+-++.++++|+. +-++.|+
T Consensus 163 ~~~Lk~Kv~aGAdf~iTQ------------~ffD~~~~~~f~~~~r~~Gi~--vPIi~GI 208 (310)
T 3apt_A 163 LRHFKAKVEAGLDFAITQ------------LFFNNAHYFGFLERARRAGIG--IPILPGI 208 (310)
T ss_dssp HHHHHHHHHHHCSEEEEC------------CCSCHHHHHHHHHHHHHTTCC--SCEECEE
T ss_pred HHHHHHHHHcCCCEEEec------------ccCCHHHHHHHHHHHHHcCCC--CeEEEEe
Confidence 4444 35787754320 012455555666677777864 3344444
No 99
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=81.90 E-value=26 Score=30.63 Aligned_cols=176 Identities=16% Similarity=0.125 Sum_probs=103.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe----cCCCC-HHH---HHHHHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT----LGMLE-KHQ---AIELKK 192 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t----~g~l~-~e~---l~~Lk~ 192 (386)
..+.++|.+.++++.+.|+..||+. |.+.+... .++..++.+++- .|..+ +.. .+...+
T Consensus 25 ~~t~~~i~~lc~eA~~~~~~aVcV~---------p~~v~~a~----~l~~~~v~v~tVigFP~G~~~~~~K~~E~~~Ai~ 91 (231)
T 3ndo_A 25 EATPSDVTALVDEAADLGVFAVCVS---------PPLVSVAA----GVAPSGLAIAAVAGFPSGKHVPGIKATEAELAVA 91 (231)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHH----HHCCTTCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCcEEEEC---------HHHHHHHH----HhcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 3689999999999999999999883 33333332 344456665443 23322 222 333345
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc--CCeeeEeEEe--ecC---CCHHHHHHHHHHHhcCCCCCC
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA--GINVCSGGII--GLG---EAEEDRVGLLHTLATLPTHPE 265 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~--Gi~v~~~~i~--Glg---et~ed~~~~l~~l~~l~~~~~ 265 (386)
.|.|.|.+-+.-. .+ ..++|+.+.+-|..++++ |..+ -+|+ |.- .|++++....+...+.| .+
T Consensus 92 ~GAdEIDmVinig-----~l-k~g~~~~v~~ei~~v~~a~~~~~l--KvIiEt~~L~~~~t~eei~~a~~ia~~aG--AD 161 (231)
T 3ndo_A 92 AGATEIDMVIDVG-----AA-LAGDLDAVSADITAVRKAVRAATL--KVIVESAALLEFSGEPLLADVCRVARDAG--AD 161 (231)
T ss_dssp TTCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTSEE--EEECCHHHHHHHTCHHHHHHHHHHHHHTT--CS
T ss_pred cCCCEEEEEeehH-----hh-hcccHHHHHHHHHHHHHHccCCce--EEEEECcccCCCCCHHHHHHHHHHHHHHC--cC
Confidence 6999887644332 11 135788888877777765 4433 3444 222 27889999999999997 77
Q ss_pred eEeeee-eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCcccc
Q 016599 266 SVPINA-LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 332 (386)
Q Consensus 266 ~v~~~~-f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~ 332 (386)
+|.... |.|. ...+.++..-+... .-++.-+..++|--++ +.....+.+||+++
T Consensus 162 fVKTSTGf~~~--------~gAt~edv~lm~~~---v~~~v~VKaaGGIrt~--~~a~~~i~aGa~Ri 216 (231)
T 3ndo_A 162 FVKTSTGFHPS--------GGASVQAVEIMART---VGERLGVKASGGIRTA--EQAAAMLDAGATRL 216 (231)
T ss_dssp EEECCCSCCTT--------CSCCHHHHHHHHHH---HTTTSEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred EEEcCCCCCCC--------CCCCHHHHHHHHHH---hCCCceEEEeCCCCCH--HHHHHHHHhcchhc
Confidence 776643 3321 22344443322222 2244455556553322 33456678999977
No 100
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=81.76 E-value=26 Score=30.52 Aligned_cols=184 Identities=14% Similarity=0.106 Sum_probs=104.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec----CCCCH----HHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GMLEK----HQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~----g~l~~----e~l~~Lk~a 193 (386)
.+.++|.+.++++.+.|+..||+. |...+...+.++ . +.+++.. |..+. ...+. .+.
T Consensus 14 ~t~~~i~~l~~~A~~~~~~aVcv~---------p~~v~~a~~~l~---g--v~v~tvigFP~G~~~~~~k~~E~~~-i~~ 78 (226)
T 1vcv_A 14 LTVDEAVAGARKAEELGVAAYCVN---------PIYAPVVRPLLR---K--VKLCVVADFPFGALPTASRIALVSR-LAE 78 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHGGGCS---S--SEEEEEESTTTCCSCHHHHHHHHHH-HTT
T ss_pred CCHHHHHHHHHHHHHhCCCEEEEC---------HHHHHHHHHHhC---C--CeEEEEeCCCCCCCchHHHHHHHHH-HHC
Confidence 689999999999999999999874 333333333322 2 5554332 32222 23455 678
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeeee-
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINA- 271 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~- 271 (386)
|.+.|.+-+.-. .+ ..+.|+.+.+-|+.++++--....-+|+-. --+++++....+...+.| .++|..+.
T Consensus 79 GAdEID~Vinig-----~~-~~g~~~~v~~ei~~v~~a~~~~~lKvIlEt~~Lt~eei~~a~~ia~eaG--ADfVKTSTG 150 (226)
T 1vcv_A 79 VADEIDVVAPIG-----LV-KSRRWAEVRRDLISVVGAAGGRVVKVITEEPYLRDEERYTLYDIIAEAG--AHFIKSSTG 150 (226)
T ss_dssp TCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTSEEEEECCGGGCCHHHHHHHHHHHHHHT--CSEEECCCS
T ss_pred CCCEEEEecchh-----hh-cCCCHHHHHHHHHHHHHHHcCCCceEEEeccCCCHHHHHHHHHHHHHcC--CCEEEeCCC
Confidence 999887655332 11 245788888888777775211234444434 237889999999999997 77776642
Q ss_pred eeec-CCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhc---Ccc
Q 016599 272 LLAV-KGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLA---GAN 330 (386)
Q Consensus 272 f~P~-~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~---Gan 330 (386)
|.|. ..++.++....+.++..-|....+..-++.-+..++|--+ .+.....+.+ ||+
T Consensus 151 f~~~~~~~~~~~~~gAt~~dv~lm~~~i~~~g~~v~vKaaGGirt--~~~al~~i~a~~~Ga~ 211 (226)
T 1vcv_A 151 FAEEAYAARQGNPVHSTPERAAAIARYIKEKGYRLGVKMAGGIRT--REQAKAIVDAIGWGED 211 (226)
T ss_dssp CCCHHHHHHTTCCSSCCHHHHHHHHHHHHHHTCCCEEEEESSCCS--HHHHHHHHHHHCSCSC
T ss_pred CCccccccccCCCCCCCHHHHHHHHHHHHHhCCCceEEEeCCCCC--HHHHHHHHHHHHCCCC
Confidence 3211 0112222344566665444444444444555555554322 1222334455 776
No 101
>4gj1_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; HISA, csgid, niaid,; 2.15A {Campylobacter jejuni subsp}
Probab=81.58 E-value=27 Score=30.62 Aligned_cols=194 Identities=11% Similarity=0.153 Sum_probs=102.2
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHHhccCeeecccCchH
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSR 206 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~ 206 (386)
++.++.+.+.|++++++.--.....+.+. ..++++.+. +..+++.+--|..+.+.++.+.++|++++.++-..+
T Consensus 34 ~~~a~~~~~~gad~lhvvDld~a~~~~~~----~~~~i~~i~~~~~~pl~vGGGIrs~e~~~~~l~~GadkVii~t~a~- 108 (243)
T 4gj1_A 34 LKKFKEYEKAGAKELHLVDLTGAKDPSKR----QFALIEKLAKEVSVNLQVGGGIRSKEEVKALLDCGVKRVVIGSMAI- 108 (243)
T ss_dssp HHHHHHHHHHTCCEEEEEEHHHHHCGGGC----CHHHHHHHHHHCCSEEEEESSCCCHHHHHHHHHTTCSEEEECTTTT-
T ss_pred HHHHHHHHHCCCCEEEEEecCcccccchh----HHHHHHHHHHhcCCCeEeccccccHHHHHHHHHcCCCEEEEccccc-
Confidence 34456677789999887531111112222 335555554 457888888999999999999999999999876554
Q ss_pred HHHhhhCCCCCHHHHHHHHHHHHHcC---CeeeEeEE------eec-C---CCHHHHHHHHHHHhcCCCCCCeEeeeeee
Q 016599 207 EFYSKIITTRSYDERLETLKHVREAG---INVCSGGI------IGL-G---EAEEDRVGLLHTLATLPTHPESVPINALL 273 (386)
Q Consensus 207 ~~~~~i~~~~s~~~~l~~i~~a~~~G---i~v~~~~i------~Gl-g---et~ed~~~~l~~l~~l~~~~~~v~~~~f~ 273 (386)
.+++-..+. +.+.| +-+..+.. +.. | .+.-++.+.++.+.+++ +..+-++..
T Consensus 109 ---------~~p~li~e~---~~~~g~q~iv~~iD~~~~~~~~v~~~gw~~~~~~~~~~~~~~~~~~g--~~eil~t~I- 173 (243)
T 4gj1_A 109 ---------KDATLCLEI---LKEFGSEAIVLALDTILKEDYVVAVNAWQEASDKKLMEVLDFYSNKG--LKHILCTDI- 173 (243)
T ss_dssp ---------TCHHHHHHH---HHHHCTTTEEEEEEEEESSSEEEC--------CCBHHHHHHHHHTTT--CCEEEEEET-
T ss_pred ---------cCCchHHHH---HhcccCceEEEEEEEEeCCCCEEEecCceecccchHHHHHHHHhhcC--CcEEEeeee-
Confidence 122222222 23344 22333332 111 2 12234566777777775 555544432
Q ss_pred ecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHH
Q 016599 274 AVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 353 (386)
Q Consensus 274 P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i 353 (386)
-..||. ..++.+. + ...+...++..+-.++|--++ .+...+..+++.++.|..+ -....+.+|.++.+
T Consensus 174 d~DGt~----~G~d~~l-~---~~l~~~~~~ipviasGGv~~~---~Dl~~l~~~~~gvivg~Al-~~g~i~l~ea~~~l 241 (243)
T 4gj1_A 174 SKDGTM----QGVNVRL-Y---KLIHEIFPNICIQASGGVASL---KDLENLKGICSGVIVGKAL-LDGVFSVEEGIRCL 241 (243)
T ss_dssp TC---------CCCHHH-H---HHHHHHCTTSEEEEESCCCSH---HHHHHTTTTCSEEEECHHH-HTTSSCHHHHHHHH
T ss_pred cccccc----cCCCHHH-H---HHHHHhcCCCCEEEEcCCCCH---HHHHHHHccCchhehHHHH-HCCCCCHHHHHHHh
Confidence 233553 2234443 2 223334555334445443332 2344456677777667533 34456777776654
No 102
>2eja_A URO-D, UPD, uroporphyrinogen decarboxylase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 1.90A {Aquifex aeolicus}
Probab=81.39 E-value=27 Score=32.09 Aligned_cols=69 Identities=10% Similarity=0.126 Sum_probs=42.3
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhhH-----HHHHHHHHHHhhc-CcEE-EEecCCCCHHHHHHHHHhccCeeecc
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTNF-----NQILEYVKDIRDM-GMEV-CCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~~-----~~l~~~i~~ik~~-g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.++...+.|+..+.+...+.... .|..+ +++.++++.+++. |+.+ ....|. ...+..|++.|++.+++.
T Consensus 184 ~~~~~~~aGad~i~i~d~~~~~l-sp~~f~ef~~p~~k~i~~~i~~~~g~~~i~~~~g~--~~~l~~l~~~g~d~~~~d 259 (338)
T 2eja_A 184 YLKEQIKAGADVVQIFDSWVNNL-SLEDYGEYVYPYVNYLISELKDFSDTPVIYFFRGS--SSFIDLAVDYRADALSVD 259 (338)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGS-CHHHHHHHTHHHHHHHHHHHHHHCCCCEEEEESSH--HHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHhCCCEEEEecCccccC-CHHHHHHHhHHHHHHHHHHHhhcCCCCEEEEcCCc--HHHHHHHHHcCCCEEEeC
Confidence 34445577988776643332222 23222 5566666777765 6664 334554 778999999999988764
No 103
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=81.18 E-value=9.9 Score=33.30 Aligned_cols=94 Identities=16% Similarity=0.140 Sum_probs=57.1
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHH
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREF 208 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~ 208 (386)
.++.+.+.|+..|.+.+....-...... ++.++.+++ .++++...-|..+.+.+..+.++|++.+.++ ..+
T Consensus 156 ~~~~~~~~G~~~i~~~~~~~~g~~~g~~----~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vG----sal 227 (253)
T 1thf_D 156 WVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA----SVF 227 (253)
T ss_dssp HHHHHHHTTCSEEEEEETTTTTSCSCCC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHTTCSEEEES----HHH
T ss_pred HHHHHHHCCCCEEEEEeccCCCCCCCCC----HHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCChHHHHH----HHH
Confidence 3445556898888775422111011112 445555653 4678888888888899999999999998875 112
Q ss_pred HhhhCCCCCHHHHHHHHHHHHHcCCeeeE
Q 016599 209 YSKIITTRSYDERLETLKHVREAGINVCS 237 (386)
Q Consensus 209 ~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~ 237 (386)
+ ....+++ ++++.+++.|+.+..
T Consensus 228 ~---~~~~~~~---~~~~~l~~~g~~~~~ 250 (253)
T 1thf_D 228 H---FREIDVR---ELKEYLKKHGVNVRL 250 (253)
T ss_dssp H---TTCSCHH---HHHHHHHHTTCCCCC
T ss_pred H---cCCCCHH---HHHHHHHHcCCcccc
Confidence 2 1222555 445566788887653
No 104
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=80.91 E-value=42 Score=33.31 Aligned_cols=219 Identities=13% Similarity=0.043 Sum_probs=115.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCH-----------HHHHHHHH
Q 016599 125 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEK-----------HQAIELKK 192 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~-----------e~l~~Lk~ 192 (386)
.+.++.++.+.+.|++.+++.--.....+ +.......+.++++++ ..+++.+--|..+. +.++.+.+
T Consensus 280 ~dp~~~A~~~~~~Ga~~l~~~dl~~~~~~-~~~~~~~~~~i~~i~~~~~ipi~vgGGIr~~~d~~~~~~~~~~~a~~~l~ 358 (555)
T 1jvn_A 280 GKPVQLAQKYYQQGADEVTFLNITSFRDC-PLKDTPMLEVLKQAAKTVFVPLTVGGGIKDIVDVDGTKIPALEVASLYFR 358 (555)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEC---CC-CGGGCHHHHHHHHHTTTCCSCEEEESSCSCEECTTCCEECHHHHHHHHHH
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccc-cCCCchHHHHHHHHHhhCCCcEEEeCccccchhcccccchHHHHHHHHHH
Confidence 47788888888899998876421111111 2223345677777764 56777777776554 77999999
Q ss_pred hccCeeecccCchHH---HHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEE-----------------------------
Q 016599 193 AGLTAYNHNLDTSRE---FYSKIITTRSYDERLETLKHVREAGINVCSGGI----------------------------- 240 (386)
Q Consensus 193 aG~~~v~i~le~~~~---~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i----------------------------- 240 (386)
+|++.|.++-....+ .++.=....+.+-+.+..+..-+.-+-+.++.-
T Consensus 359 aGad~V~igt~~~~~~~~~~~~~~~~~~~~~i~~~~~~~g~~~ivv~iD~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 438 (555)
T 1jvn_A 359 SGADKVSIGTDAVYAAEKYYELGNRGDGTSPIETISKAYGAQAVVISVDPKRVYVNSQADTKNKVFETEYPGPNGEKYCW 438 (555)
T ss_dssp HTCSEEEECHHHHHHHHHHHHTTSCCCSCSHHHHHHHHHCGGGEEEEECEEEEEESSGGGCSSCCEECSSCCTTCCCEEE
T ss_pred cCCCEEEECCHHhhCchhhccccccccCHHHHHHHHHHhCCCcEEEEEEccccccccccccccccccccccCCCCCccee
Confidence 999999987665522 222111111232222222222111132333321
Q ss_pred ---eecCC---CHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCccc
Q 016599 241 ---IGLGE---AEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRV 314 (386)
Q Consensus 241 ---~Glge---t~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~ 314 (386)
+-.|- +.-+..+.++.+.++| ++.+-++... ..|+. ..++.+. ++.+. ... +.-+-.++|-.
T Consensus 439 ~~v~~~Gw~~~~~~~~~e~a~~~~~~G--a~~il~t~~~-~dG~~----~G~d~~l-i~~l~---~~~-~iPVIasGGi~ 506 (555)
T 1jvn_A 439 YQCTIKGGRESRDLGVWELTRACEALG--AGEILLNCID-KDGSN----SGYDLEL-IEHVK---DAV-KIPVIASSGAG 506 (555)
T ss_dssp EEEEETTTTEEEEEEHHHHHHHHHHTT--CCEEEECCGG-GTTTC----SCCCHHH-HHHHH---HHC-SSCEEECSCCC
T ss_pred EEEEEecCccCCCCCHHHHHHHHHHcC--CCEEEEeCCC-CCCCC----CCCCHHH-HHHHH---HhC-CccEEEECCCC
Confidence 11121 1123567778888886 6666433221 12332 2234333 22222 222 11122233222
Q ss_pred ccChhHHHhhhh-cCccccccCCccccCCCCChhHHHHHHHHcCCC
Q 016599 315 RFSMPEQALCFL-AGANSIFTGEKLLTTPNNDFDADQLMFKVLGLT 359 (386)
Q Consensus 315 ~~~~~~~~~~l~-~Gan~~~~g~~~~t~~~~~~~~~~~~i~~~G~~ 359 (386)
+ .+.-...+. .||+.++.|. .......++.+.++.+++.|..
T Consensus 507 s--~~d~~~~~~~~G~~gvivg~-a~~~~~~~~~e~~~~l~~~gi~ 549 (555)
T 1jvn_A 507 V--PEHFEEAFLKTRADACLGAG-MFHRGEFTVNDVKEYLLEHGLK 549 (555)
T ss_dssp S--HHHHHHHHHHSCCSEEEESH-HHHTTSCCHHHHHHHHHHTTCC
T ss_pred C--HHHHHHHHHhcCChHHHHHH-HHHcCCCCHHHHHHHHHHCCCc
Confidence 2 222234444 6999998887 3445567899999999999953
No 105
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=80.84 E-value=18 Score=31.53 Aligned_cols=92 Identities=22% Similarity=0.262 Sum_probs=55.6
Q ss_pred HHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHHH
Q 016599 131 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFY 209 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~ 209 (386)
++.+.+.|+..|++.+-... |.....+ ++.++++++ .++++...-|..+.+.++.++++|++.+.++= .+
T Consensus 158 ~~~~~~~G~~~i~~~~~~~~--g~~~g~~--~~~i~~l~~~~~ipvia~GGI~~~~d~~~~~~~Gadgv~vgs----al- 228 (252)
T 1ka9_F 158 AVKGVELGAGEILLTSMDRD--GTKEGYD--LRLTRMVAEAVGVPVIASGGAGRMEHFLEAFQAGAEAALAAS----VF- 228 (252)
T ss_dssp HHHHHHHTCCEEEEEETTTT--TTCSCCC--HHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESH----HH-
T ss_pred HHHHHHcCCCEEEEecccCC--CCcCCCC--HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHCCCHHHHHHH----HH-
Confidence 34455578888877532211 1111111 455555553 47788888888888999999999999988741 11
Q ss_pred hhhCCCCCHHHHHHHHHHHHHcCCeee
Q 016599 210 SKIITTRSYDERLETLKHVREAGINVC 236 (386)
Q Consensus 210 ~~i~~~~s~~~~l~~i~~a~~~Gi~v~ 236 (386)
+....++.+. .+.+.+.|+.+.
T Consensus 229 --~~~~~~~~~~---~~~l~~~~~~~~ 250 (252)
T 1ka9_F 229 --HFGEIPIPKL---KRYLAEKGVHVR 250 (252)
T ss_dssp --HTTSSCHHHH---HHHHHHTTCCBC
T ss_pred --HcCCCCHHHH---HHHHHHCCCCcC
Confidence 1223366644 455677888764
No 106
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=80.36 E-value=25 Score=32.67 Aligned_cols=86 Identities=19% Similarity=0.080 Sum_probs=55.5
Q ss_pred HHHHHHHHHhccCeeecccCch-HHHHhhhCC---CCCHHHHHHHHHHHHHc-CCeeeEeEEeecC--CCHHHHHHHHHH
Q 016599 184 KHQAIELKKAGLTAYNHNLDTS-REFYSKIIT---TRSYDERLETLKHVREA-GINVCSGGIIGLG--EAEEDRVGLLHT 256 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~---~~s~~~~l~~i~~a~~~-Gi~v~~~~i~Glg--et~ed~~~~l~~ 256 (386)
.+.++.+.++|+|.|.++.-.. ......-.+ ..+.+...+.++.+++. ++++.+-+=.|.. .+.++..+.++.
T Consensus 73 ~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v~~PV~vKiR~g~~~~~~~~~~~~~a~~ 152 (350)
T 3b0p_A 73 AEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAVRVPVTVKMRLGLEGKETYRGLAQSVEA 152 (350)
T ss_dssp HHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHCSSCEEEEEESCBTTCCCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHhCCceEEEEecCcCccccHHHHHHHHHH
Confidence 3445666778999998877554 433322111 13566777777777763 7777665555652 355678888899
Q ss_pred HhcCCCCCCeEeeee
Q 016599 257 LATLPTHPESVPINA 271 (386)
Q Consensus 257 l~~l~~~~~~v~~~~ 271 (386)
+.+.| ++.+.++.
T Consensus 153 l~~aG--~d~I~V~~ 165 (350)
T 3b0p_A 153 MAEAG--VKVFVVHA 165 (350)
T ss_dssp HHHTT--CCEEEEEC
T ss_pred HHHcC--CCEEEEec
Confidence 99887 77777754
No 107
>3gnh_A L-lysine, L-arginine carboxypeptidase CC2672; N-methyl phosphonate derivative of L- arginine, hydrolase; HET: KCX M3R; 1.70A {Caulobacter crescentus CB15} PDB: 3mtw_A*
Probab=79.84 E-value=25 Score=32.61 Aligned_cols=79 Identities=15% Similarity=0.206 Sum_probs=51.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe--cccCC---CCCC-hhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMG--AAWRD---TIGR-KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~--~g~~~---~~ge-~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~ 195 (386)
-+++++.+.+++..+.|...+-+. |+... ..+. ....+.+.++++..++.|+.+.++.. ..+.++...++|+
T Consensus 164 ~~~~~~~~~~~~~~~~g~~~ik~~~~G~~~~~~~~~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~~~~~g~ 241 (403)
T 3gnh_A 164 DSPDEARKAVRTLKKYGAQVIKICATGGVFSRGNEPGQQQLTYEEMKAVVDEAHMAGIKVAAHAH--GASGIREAVRAGV 241 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEEECBCCSSSSSCCTTCBCSCHHHHHHHHHHHHHTTCEEEEEEC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeecCCcCCCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEeC--CHHHHHHHHHhCC
Confidence 578999999999888888766543 22100 0111 13457788888888888888765532 2345666667787
Q ss_pred Ceeeccc
Q 016599 196 TAYNHNL 202 (386)
Q Consensus 196 ~~v~i~l 202 (386)
+.+.+..
T Consensus 242 ~~i~H~~ 248 (403)
T 3gnh_A 242 DTIEHAS 248 (403)
T ss_dssp SEEEECT
T ss_pred CEEecCC
Confidence 7776644
No 108
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=79.82 E-value=11 Score=34.19 Aligned_cols=122 Identities=15% Similarity=0.125 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cC---cEEEEec--CCCCHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MG---MEVCCTL--GMLEKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g---~~i~~t~--g~l~~e~l~~Lk~aG~ 195 (386)
.+++++.+.++.+.+.|++.+.+.. +.|- .....+.++++.+++ .. +.+..+| |.-... ...-.++|+
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~D----t~G~-~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~an-~l~Ai~aG~ 225 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLGD----TIGR-GTPDTVAAMLDAVLAIAPAHSLAGHYHDTGGRALDN-IRVSLEKGL 225 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEE----TTSC-CCHHHHHHHHHHHHTTSCGGGEEEEEBCTTSCHHHH-HHHHHHHTC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEecC----CCCC-cCHHHHHHHHHHHHHhCCCCeEEEEECCCcchHHHH-HHHHHHhCC
Confidence 5789999999988899999888752 1221 223456666666653 22 3345544 433333 444457899
Q ss_pred CeeecccCch-HHHHhhhCCCC-CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 196 TAYNHNLDTS-REFYSKIITTR-SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 196 ~~v~i~le~~-~~~~~~i~~~~-s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.+..++-++ +--|..-+.+. ..++.+..+ ++.|+.+ |-+.+.+.+..+++.++
T Consensus 226 ~~vd~sv~GlG~cp~a~g~~GN~~~e~lv~~l---~~~g~~~--------~id~~~l~~~~~~~~~~ 281 (295)
T 1ydn_A 226 RVFDASVGGLGGCPFAPGAKGNVDTVAVVEML---HEMGFET--------GLDLDRLRSAGLFTQAL 281 (295)
T ss_dssp CEEEEBTTCCSCBTTBTTSCCBCBHHHHHHHH---HHTTCBC--------CCCHHHHHHHHHHHHHH
T ss_pred CEEEeccccCCCCCCCCCCcCChhHHHHHHHH---HhcCCCC--------CcCHHHHHHHHHHHHHH
Confidence 9999887664 21121112222 566666554 3566653 33566777776666544
No 109
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=78.67 E-value=7.4 Score=36.35 Aligned_cols=80 Identities=14% Similarity=0.047 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCC-ChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-cCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG-RKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-LTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~g-e~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG-~~~v 198 (386)
.+.++..+.++.+.+.|+.-+.+..|...... .+..-....+.++.+++ .++++..+.|..+.+.++.+.+.| +|.|
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~G~aD~V 315 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQAGSADLV 315 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHTTSCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHCCCceEE
Confidence 46777788888888888887777633211100 00000112344555553 366666665566788888877777 7877
Q ss_pred ecc
Q 016599 199 NHN 201 (386)
Q Consensus 199 ~i~ 201 (386)
.++
T Consensus 316 ~iG 318 (349)
T 3hgj_A 316 LLG 318 (349)
T ss_dssp EES
T ss_pred Eec
Confidence 765
No 110
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=77.84 E-value=25 Score=30.29 Aligned_cols=92 Identities=21% Similarity=0.244 Sum_probs=53.7
Q ss_pred HHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHHH
Q 016599 131 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFY 209 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~ 209 (386)
++.+.+.|++.+.+.+-.....+..... +.++.+++ .++++..+-|..+.+.+.++.++|++.+.++= .++
T Consensus 160 ~~~~~~~G~d~i~~~~~~~~g~~~~~~~----~~i~~l~~~~~~pvia~GGi~~~~~~~~~~~~Ga~~v~vgs----al~ 231 (253)
T 1h5y_A 160 AKEVEELGAGEILLTSIDRDGTGLGYDV----ELIRRVADSVRIPVIASGGAGRVEHFYEAAAAGADAVLAAS----LFH 231 (253)
T ss_dssp HHHHHHHTCSEEEEEETTTTTTCSCCCH----HHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEESH----HHH
T ss_pred HHHHHhCCCCEEEEecccCCCCcCcCCH----HHHHHHHHhcCCCEEEeCCCCCHHHHHHHHHcCCcHHHHHH----HHH
Confidence 4455567888887654221111111122 33444443 36778888888777888888899999988751 222
Q ss_pred hhhCCCCCHHHHHHHHHHHHHcCCeee
Q 016599 210 SKIITTRSYDERLETLKHVREAGINVC 236 (386)
Q Consensus 210 ~~i~~~~s~~~~l~~i~~a~~~Gi~v~ 236 (386)
....+++ +..+.+.+.|+.+.
T Consensus 232 ---~~~~~~~---~~~~~l~~~g~~~~ 252 (253)
T 1h5y_A 232 ---FRVLSIA---QVKRYLKERGVEVR 252 (253)
T ss_dssp ---TTSSCHH---HHHHHHHHTTCBCC
T ss_pred ---cCCCCHH---HHHHHHHHcCCCCC
Confidence 1233454 44455677887653
No 111
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=77.78 E-value=17 Score=31.64 Aligned_cols=171 Identities=11% Similarity=-0.006 Sum_probs=85.0
Q ss_pred HHHHHHHHhhcCcE-EEEecC----CCCH----HHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc
Q 016599 161 ILEYVKDIRDMGME-VCCTLG----MLEK----HQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA 231 (386)
Q Consensus 161 l~~~i~~ik~~g~~-i~~t~g----~l~~----e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~ 231 (386)
+.+.++.+++.|+. +.+... ..++ +..+.++++|+....+..... .+.+...+.++.+.+.
T Consensus 32 ~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~----------~~~~~~~~~i~~A~~l 101 (257)
T 3lmz_A 32 LDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYM----------KSEEEIDRAFDYAKRV 101 (257)
T ss_dssp HHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEE----------CSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEecccc----------CCHHHHHHHHHHHHHh
Confidence 55666666766665 333322 1233 445556677876655533211 4577778889999999
Q ss_pred CCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecC
Q 016599 232 GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSA 311 (386)
Q Consensus 232 Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~ 311 (386)
|.+.-.. .. + .+.+.++.+.+++.| + .+.+....| .++ ...+.+++.+++. ..-|+..+.+..
T Consensus 102 Ga~~v~~-~p--~--~~~l~~l~~~a~~~g--v-~l~lEn~~~-~~~-----~~~~~~~~~~ll~---~~~p~vg~~~D~ 164 (257)
T 3lmz_A 102 GVKLIVG-VP--N--YELLPYVDKKVKEYD--F-HYAIHLHGP-DIK-----TYPDATDVWVHTK---DLDPRIGMCLDV 164 (257)
T ss_dssp TCSEEEE-EE--C--GGGHHHHHHHHHHHT--C-EEEEECCCT-TCS-----SSCSHHHHHHHHT---TSCTTEEEEEEH
T ss_pred CCCEEEe-cC--C--HHHHHHHHHHHHHcC--C-EEEEecCCC-ccc-----ccCCHHHHHHHHH---hCCCCccEEEch
Confidence 9873221 12 2 345666666676665 2 233332211 122 1235666666554 223543333433
Q ss_pred ccccc-ChhHHHhhhhcCcccc--------ccC---Ccc--ccCCCCChhHHHHHHHHcCCC
Q 016599 312 GRVRF-SMPEQALCFLAGANSI--------FTG---EKL--LTTPNNDFDADQLMFKVLGLT 359 (386)
Q Consensus 312 g~~~~-~~~~~~~~l~~Gan~~--------~~g---~~~--~t~~~~~~~~~~~~i~~~G~~ 359 (386)
++... +.+. ...+..-.+.+ ..+ ... .-.+..+..+..+.+++.||.
T Consensus 165 ~h~~~~g~d~-~~~l~~~~~~i~~vHl~D~~~~~~~~~~~~~G~G~id~~~~~~~L~~~gy~ 225 (257)
T 3lmz_A 165 GHDLRNGCDP-VADLKKYHTRVFDMHIKDVTDSSKAGVGIEIGRGKIDFPALIRMMREVNYT 225 (257)
T ss_dssp HHHHHTTCCH-HHHHHHHGGGEEEEEECEESCSSTTCCEECTTSSSCCHHHHHHHHHHTTCC
T ss_pred hhHHHcCCCH-HHHHHHhhcceeEEeecccccccCCCCccccCCCccCHHHHHHHHHHcCCC
Confidence 33211 1111 11111111222 110 001 112447899999999999996
No 112
>1vc4_A Indole-3-glycerol phosphate synthase; lyase, tryptophan biosynthesis, riken structural genomics/PR initiative, RSGI, structural genomics; 1.80A {Thermus thermophilus} SCOP: c.1.2.4
Probab=77.72 E-value=37 Score=29.97 Aligned_cols=174 Identities=14% Similarity=0.016 Sum_probs=95.5
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHHhccCeeecccCc
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 204 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~ 204 (386)
...+.++.+.+.|+..+.+.+......|.+ + .++.++ ..++++....+..++..+...+.+|+|.|.++...
T Consensus 66 ~p~~~A~~~~~~GA~~isvlt~~~~f~G~~---~----~l~~i~~~v~lPvl~kdfI~d~~qi~~a~~~GAD~VlL~~~~ 138 (254)
T 1vc4_A 66 DPVEAALAYARGGARAVSVLTEPHRFGGSL---L----DLKRVREAVDLPLLRKDFVVDPFMLEEARAFGASAALLIVAL 138 (254)
T ss_dssp CHHHHHHHHHHTTCSEEEEECCCSSSCCCH---H----HHHHHHHHCCSCEEEESCCCSHHHHHHHHHTTCSEEEEEHHH
T ss_pred CHHHHHHHHHHcCCCEEEEecchhhhccCH---H----HHHHHHHhcCCCEEECCcCCCHHHHHHHHHcCCCEEEECccc
Confidence 445666777788999888765322222322 2 222233 35777777777788989999999999999986543
Q ss_pred hHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCC
Q 016599 205 SREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQK 284 (386)
Q Consensus 205 ~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~ 284 (386)
++ +...+.++.+++.|+.+- +- -.+++|.. .+.+++ .+.++++..... .+
T Consensus 139 l~------------~~l~~l~~~a~~lGl~~l----ve-v~~~~E~~----~a~~~g--ad~IGvn~~~l~---~~---- 188 (254)
T 1vc4_A 139 LG------------ELTGAYLEEARRLGLEAL----VE-VHTERELE----IALEAG--AEVLGINNRDLA---TL---- 188 (254)
T ss_dssp HG------------GGHHHHHHHHHHHTCEEE----EE-ECSHHHHH----HHHHHT--CSEEEEESBCTT---TC----
T ss_pred hH------------HHHHHHHHHHHHCCCeEE----EE-ECCHHHHH----HHHHcC--CCEEEEccccCc---CC----
Confidence 21 223355566777887643 11 23556654 333444 678888775431 11
Q ss_pred CCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccc
Q 016599 285 PVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLL 339 (386)
Q Consensus 285 ~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~ 339 (386)
.++.+.+.++.........+ ..-++.|-++- ++.-..... |++.++.|+.+.
T Consensus 189 ~~dl~~~~~L~~~i~~~~~~-~~vIAegGI~s-~~dv~~l~~-Ga~gvlVGsAl~ 240 (254)
T 1vc4_A 189 HINLETAPRLGRLARKRGFG-GVLVAESGYSR-KEELKALEG-LFDAVLIGTSLM 240 (254)
T ss_dssp CBCTTHHHHHHHHHHHTTCC-SEEEEESCCCS-HHHHHTTTT-TCSEEEECHHHH
T ss_pred CCCHHHHHHHHHhCccccCC-CeEEEEcCCCC-HHHHHHHHc-CCCEEEEeHHHc
Confidence 22333333333322111112 22233222221 333345556 999998887544
No 113
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=76.87 E-value=38 Score=29.69 Aligned_cols=176 Identities=19% Similarity=0.226 Sum_probs=103.1
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec----CCCC-HH---HHHHHHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GMLE-KH---QAIELKK 192 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~----g~l~-~e---~l~~Lk~ 192 (386)
..+.++|.+.++++.+.|+..||+. |.+.+...+.+ +..++.+++-. |..+ +. ..+.-.+
T Consensus 39 ~~t~~~i~~lc~eA~~~~~~aVcV~---------p~~v~~a~~~L---~~s~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~ 106 (239)
T 3ngj_A 39 DATEEQIRKLCSEAAEYKFASVCVN---------PTWVPLCAELL---KGTGVKVCTVIGFPLGATPSEVKAYETKVAVE 106 (239)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEC---------GGGHHHHHHHH---TTSSCEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHHh---CCCCCeEEEEeccCCCCCchHHHHHHHHHHHH
Confidence 3689999999999999999999883 33444444433 44566654432 3333 22 2333345
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc--CCeeeEeEEeecC-CCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA--GINVCSGGIIGLG-EAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~--Gi~v~~~~i~Glg-et~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
.|.|.|.+-+... . + ..++|+.+.+-|+.++++ +. ..-+|+=.+ -+++++....+...+.| +++|..
T Consensus 107 ~GAdEIDmViNig-~----l-k~g~~~~v~~eI~~v~~a~~~~--~lKVIlEt~~Lt~eei~~a~~ia~~aG--ADfVKT 176 (239)
T 3ngj_A 107 QGAEEVDMVINIG-M----V-KAKKYDDVEKDVKAVVDASGKA--LTKVIIECCYLTNEEKVEVCKRCVAAG--AEYVKT 176 (239)
T ss_dssp TTCSEEEEECCHH-H----H-HTTCHHHHHHHHHHHHHHHTTS--EEEEECCGGGSCHHHHHHHHHHHHHHT--CSEEEC
T ss_pred cCCCEEEEEeehH-H----h-ccccHHHHHHHHHHHHHHhcCC--ceEEEEecCCCCHHHHHHHHHHHHHHC--cCEEEC
Confidence 5999888655432 1 1 145788788777777765 43 223344222 37888999989999997 777766
Q ss_pred ee-eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCcccc
Q 016599 270 NA-LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 332 (386)
Q Consensus 270 ~~-f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~ 332 (386)
+. |.+ ...+.++...+... .-++.-+..++|--+. +.....+.+||+.+
T Consensus 177 STGf~~---------ggAt~~dv~lmr~~---vg~~v~VKasGGIrt~--~da~~~i~aGA~ri 226 (239)
T 3ngj_A 177 STGFGT---------HGATPEDVKLMKDT---VGDKALVKAAGGIRTF--DDAMKMINNGASRI 226 (239)
T ss_dssp CCSSSS---------CCCCHHHHHHHHHH---HGGGSEEEEESSCCSH--HHHHHHHHTTEEEE
T ss_pred CCCCCC---------CCCCHHHHHHHHHh---hCCCceEEEeCCCCCH--HHHHHHHHhcccce
Confidence 52 322 12344443222222 2233345555543222 33466778999976
No 114
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=76.67 E-value=37 Score=30.17 Aligned_cols=119 Identities=14% Similarity=0.136 Sum_probs=74.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCC-C--CCC-hhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRD-T--IGR-KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~-~--~ge-~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
+.+..++.++.+++.|+.-|.++.- .+ + ++- ....+.+..+.+..++.|+++.++. .+.+.++.+.+. ++.+
T Consensus 35 ~~e~a~~~a~~l~~~Ga~~vk~~~f-kprts~~~~~g~~~egl~~l~~~~~~~Gl~~~te~--~d~~~~~~l~~~-vd~~ 110 (262)
T 1zco_A 35 SREQIMKVAEFLAEVGIKVLRGGAF-KPRTSPYSFQGYGEKALRWMREAADEYGLVTVTEV--MDTRHVELVAKY-SDIL 110 (262)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSS-CCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC--CCGGGHHHHHHH-CSEE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEec-ccCCCcccccCccHHHHHHHHHHHHHcCCcEEEee--CCHHhHHHHHhh-CCEE
Confidence 6899999999999999976655532 21 1 000 0123444444444457899987764 566778888888 8999
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
.|+--.. .++ ..++.+.+.|.+|.. =-|..-|.+++...++.+..-|
T Consensus 111 kIga~~~----------~n~----~ll~~~a~~~kPV~l--k~G~~~t~~e~~~Av~~i~~~G 157 (262)
T 1zco_A 111 QIGARNS----------QNF----ELLKEVGKVENPVLL--KRGMGNTIQELLYSAEYIMAQG 157 (262)
T ss_dssp EECGGGT----------TCH----HHHHHHTTSSSCEEE--ECCTTCCHHHHHHHHHHHHTTT
T ss_pred EECcccc----------cCH----HHHHHHHhcCCcEEE--ecCCCCCHHHHHHHHHHHHHCC
Confidence 8864332 111 223344445555332 2333347999999999998887
No 115
>1hg3_A Triosephosphate isomerase; thermostability, tetrameric; 2.7A {Pyrococcus woesei} SCOP: c.1.1.1
Probab=76.13 E-value=38 Score=29.35 Aligned_cols=128 Identities=13% Similarity=0.143 Sum_probs=76.2
Q ss_pred HHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCe
Q 016599 187 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPES 266 (386)
Q Consensus 187 l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~ 266 (386)
+..++++|++.+.++.-- +...+.+.-+-++.+.+.|+. .++-.||+.|. +.+..++ +.
T Consensus 81 ~~~l~~~Ga~~Vllghse---------RR~~~~e~~~k~~~A~~~GL~----~ivcVge~~e~-----~~~~~~~--~~- 139 (225)
T 1hg3_A 81 PEAVKEAGAVGTLLNHSE---------NRMILADLEAAIRRAEEVGLM----TMVCSNNPAVS-----AAVAALN--PD- 139 (225)
T ss_dssp HHHHHHTTCCEEEESCGG---------GCCBHHHHHHHHHHHHHHTCE----EEEEESSHHHH-----HHHHTTC--CS-
T ss_pred HHHHHHcCCCEEEECcch---------hcCCHHHHHHHHHHHHHCCCE----EEEEeCCHHHH-----HHHhcCC--CC-
Confidence 788899999999886422 123455566778889999986 23324776554 2334553 43
Q ss_pred EeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCcccc
Q 016599 267 VPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLT 340 (386)
Q Consensus 267 v~~~~f~P~~--gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t 340 (386)
+..|.|.- ||-.. ....++++.....+..|.+.++. .-+..|-++- ++........|+|.++.|+..+.
T Consensus 140 --iIayep~waiGtG~~-v~t~~~d~~~~~~~~ir~~~~~~-~ilyggsV~~-~n~~~~~~~~~vDG~LVG~a~l~ 210 (225)
T 1hg3_A 140 --YVAVEPPELIGTGIP-VSKAKPEVITNTVELVKKVNPEV-KVLCGAGIST-GEDVKKAIELGTVGVLLASGVTK 210 (225)
T ss_dssp --EEEECCTTTTTTSCC-TTTSCTHHHHHHHHHHHHHCTTS-EEEEESSCCS-HHHHHHHHHTTCSEEEESHHHHT
T ss_pred --EEEEeChhhhccCCC-CCCCChhHHHHHHHHHHhccCCC-EEEEeCCCCc-HHHHHHHHhCCCCEEEeCHHHHC
Confidence 44454532 44311 12356676777788888876553 3344333332 23335556789999988875443
No 116
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=76.09 E-value=17 Score=30.75 Aligned_cols=93 Identities=25% Similarity=0.335 Sum_probs=54.8
Q ss_pred CHHHHHHHH-HHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcE-EEEe-------cC--CCCHHHHHHHH
Q 016599 123 TKDAVMQAA-QKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCT-------LG--MLEKHQAIELK 191 (386)
Q Consensus 123 s~eeI~~~~-~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~-i~~t-------~g--~l~~e~l~~Lk 191 (386)
+.++.++.+ +.+.+.|++.|++-+. .|+ .-..+++. + .++. ++++ +| .++++..+.|.
T Consensus 27 NT~~tl~la~era~e~~Ik~iVVAS~----sG~--TA~k~~e~---~--~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 95 (201)
T 1vp8_A 27 NTEETLRLAVERAKELGIKHLVVASS----YGD--TAMKALEM---A--EGLEVVVVTYHTGFVREGENTMPPEVEEELR 95 (201)
T ss_dssp GHHHHHHHHHHHHHHHTCCEEEEECS----SSH--HHHHHHHH---C--TTCEEEEEECCTTSSSTTCCSSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHcCCCEEEEEeC----CCh--HHHHHHHH---h--cCCeEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 455555554 5566789999988542 242 12233332 3 3455 3444 33 26899999999
Q ss_pred HhccCeee--cccCch-HHHHhhhCCCCCHHHHHHHHH
Q 016599 192 KAGLTAYN--HNLDTS-REFYSKIITTRSYDERLETLK 226 (386)
Q Consensus 192 ~aG~~~v~--i~le~~-~~~~~~i~~~~s~~~~l~~i~ 226 (386)
+.|+..+. +-+.+. +.+.++..+-...+-.-++++
T Consensus 96 ~~G~~V~t~tH~lsgveR~is~kfGG~~p~eiiA~tLR 133 (201)
T 1vp8_A 96 KRGAKIVRQSHILSGLERSISRKLGGVSRTEAIAEALR 133 (201)
T ss_dssp HTTCEEEECCCTTTTTHHHHHHHTCCCCHHHHHHHHHH
T ss_pred hCCCEEEEEeccccchhHHHHHhcCCCCHHHHHHHHHH
Confidence 99988776 355666 445555544334444445666
No 117
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=76.02 E-value=46 Score=30.25 Aligned_cols=118 Identities=14% Similarity=0.043 Sum_probs=67.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEE--Ee----cCCCC-HHHHHHHH--
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVC--CT----LGMLE-KHQAIELK-- 191 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~--~t----~g~l~-~e~l~~Lk-- 191 (386)
.+.+++...+..+...|++.|....|+.+..+ +..+.+-.++++.+++. ++.+. .. +..-+ +..++.|+
T Consensus 94 ~~~~~l~~~L~~~~~~GI~nILaLrGDpp~~~-~~~~~~A~dLv~~ir~~~~f~IgvA~yPE~Hp~a~~~~~d~~~Lk~K 172 (304)
T 3fst_A 94 ATPDELRTIARDYWNNGIRHIVALRGDLPPGS-GKPEMYASDLVTLLKEVADFDISVAAYPEVHPEAKSAQADLLNLKRK 172 (304)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEECCCCC-------CCCHHHHHHHHHHHCCCEEEEEECTTCCTTCSCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEecCCCCCCC-CCCCCCHHHHHHHHHHcCCCeEEEEeCCCcCCCCCCHHHHHHHHHHH
Confidence 47789999999999999999987776554433 22344566666666643 44432 22 12222 23444443
Q ss_pred -HhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec--CCCHHHHHHHH
Q 016599 192 -KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLL 254 (386)
Q Consensus 192 -~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l 254 (386)
++|.+.+--- .-.+.+...+-++.++++|+. +-++.|+ -.+...+..+.
T Consensus 173 vdAGAdf~iTQ------------~ffD~~~~~~f~~~~r~~Gi~--vPIi~GImPi~s~~~~~~~~ 224 (304)
T 3fst_A 173 VDAGANRAITQ------------FFFDVESYLRFRDRCVSAGID--VEIIPGILPVSNFKQAKKLA 224 (304)
T ss_dssp HHHTCCEEEEC------------CCSCHHHHHHHHHHHHHTTCC--SCEECEECCCSCHHHHHHHH
T ss_pred HHcCCCEEEeC------------ccCCHHHHHHHHHHHHhcCCC--CcEEEEecccCCHHHHHHHH
Confidence 5788865420 113455566667778888874 3455555 34566655553
No 118
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=75.96 E-value=15 Score=34.54 Aligned_cols=80 Identities=16% Similarity=0.129 Sum_probs=58.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC------------CCC--ChhhHHHHHHHHHHHhh-c--CcEEEEecCCCCH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD------------TIG--RKTNFNQILEYVKDIRD-M--GMEVCCTLGMLEK 184 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~------------~~g--e~~~~~~l~~~i~~ik~-~--g~~i~~t~g~l~~ 184 (386)
.+.+++.+.++.+.+.|++.+.+.+.... .+| .+...+.-++.++.+++ . .+++..+.|..+.
T Consensus 231 ~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipvI~~GGI~s~ 310 (367)
T 3zwt_A 231 LTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPIIGVGGVSSG 310 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEESSCCSH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceEEEECCCCCH
Confidence 56788999999999999998887532210 011 12234556788888874 3 5788888899898
Q ss_pred HHHHHHHHhccCeeecc
Q 016599 185 HQAIELKKAGLTAYNHN 201 (386)
Q Consensus 185 e~l~~Lk~aG~~~v~i~ 201 (386)
+.+.++.++|++.|.++
T Consensus 311 ~da~~~l~~GAd~V~vg 327 (367)
T 3zwt_A 311 QDALEKIRAGASLVQLY 327 (367)
T ss_dssp HHHHHHHHHTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEC
Confidence 88888888999999875
No 119
>1w0m_A TIM, triosephosphate isomerase; glycolysis, gluconeogenesis; 2.5A {Thermoproteus tenax} SCOP: c.1.1.1
Probab=75.93 E-value=39 Score=29.33 Aligned_cols=129 Identities=11% Similarity=0.144 Sum_probs=76.2
Q ss_pred HHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCe
Q 016599 187 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPES 266 (386)
Q Consensus 187 l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~ 266 (386)
+..++++|++.+.++.-- +...+.+.-+-++.+.+.|+. .++-.||+.+. +.+..++ +.
T Consensus 78 ~~~l~~~Ga~~Vllghse---------RR~~~~e~~~k~~~A~~~GL~----~ivcVge~~e~-----~~~~~~~--~~- 136 (226)
T 1w0m_A 78 LENIKEAGGSGVILNHSE---------APLKLNDLARLVAKAKSLGLD----VVVCAPDPRTS-----LAAAALG--PH- 136 (226)
T ss_dssp HHHHHHHTCCEEEECCTT---------SCCBHHHHHHHHHHHHHTTCE----EEEEESSHHHH-----HHHHHTC--CS-
T ss_pred HHHHHHcCCCEEEEeeee---------ccCCHHHHHHHHHHHHHCCCE----EEEEeCCHHHH-----HHHhcCC--CC-
Confidence 788889999999886422 123455566778889999986 22324776554 2334454 43
Q ss_pred EeeeeeeecC--CCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccC
Q 016599 267 VPINALLAVK--GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTT 341 (386)
Q Consensus 267 v~~~~f~P~~--gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~ 341 (386)
+..|.|.- ||-.. ....++++.....+..|.+.++. .-+..|-++- .+........|++.++.|+..+..
T Consensus 137 --iIayep~waiGtG~~-v~t~~~d~~~~~~~~ir~~~~~~-~ilyggsV~~-~n~~~~~~~~giDG~LVG~a~l~a 208 (226)
T 1w0m_A 137 --AVAVEPPELIGTGRA-VSRYKPEAIVETVGLVSRHFPEV-SVITGAGIES-GDDVAAALRLGTRGVLLASAAVKA 208 (226)
T ss_dssp --EEEECCGGGTTTSCC-HHHHCHHHHHHHHHHHHHHCTTS-EEEEESSCCS-HHHHHHHHHTTCSEEEECHHHHTC
T ss_pred --EEEEcChhhhccCCC-CCCCChhHHHHHHHHHHhccCCC-EEEEeCCCCc-HHHHHHHHhCCCCEEEECHHHHCC
Confidence 34444432 44210 01346777777888888876553 3344333332 233355567899999888755433
No 120
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=75.66 E-value=26 Score=31.74 Aligned_cols=123 Identities=12% Similarity=0.105 Sum_probs=73.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c-Cc--EEEEecCC-CCHHHHHHHHHhccC
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GM--EVCCTLGM-LEKHQAIELKKAGLT 196 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~-g~--~i~~t~g~-l~~e~l~~Lk~aG~~ 196 (386)
.+++++.+.++.+.+.|++.+.+.. +.|- ..-..+.++++.+++ . ++ .++.+|+. +-......-.++|++
T Consensus 156 ~~~~~~~~~~~~~~~~G~d~i~l~D----T~G~-~~P~~~~~lv~~l~~~~~~~~l~~H~Hn~~Gla~An~laAv~aGa~ 230 (302)
T 2ftp_A 156 VDPRQVAWVARELQQMGCYEVSLGD----TIGV-GTAGATRRLIEAVASEVPRERLAGHFHDTYGQALANIYASLLEGIA 230 (302)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEE----SSSC-CCHHHHHHHHHHHTTTSCGGGEEEEEBCTTSCHHHHHHHHHHTTCC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC----CCCC-cCHHHHHHHHHHHHHhCCCCeEEEEeCCCccHHHHHHHHHHHhCCC
Confidence 5789999999999999999988852 1221 223566677777763 2 23 35554433 333344444578999
Q ss_pred eeecccCch-HHHHhhhC-CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 197 AYNHNLDTS-REFYSKII-TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 197 ~v~i~le~~-~~~~~~i~-~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.|..++-++ +--|..=+ +.-+.++.+..++ ..|+.+ +-+.+.+.+..+++.+.
T Consensus 231 ~vd~tv~GlG~cp~a~gr~GN~~~E~lv~~l~---~~g~~~--------~idl~~l~~~~~~~~~~ 285 (302)
T 2ftp_A 231 VFDSSVAGLGGCPYAKGATGNVASEDVLYLLN---GLEIHT--------GVDMHALVDAGQRICAV 285 (302)
T ss_dssp EEEEBGGGCCBCGGGTTCBCBCBHHHHHHHHH---HTTCBC--------CCCHHHHHHHHHHHHHH
T ss_pred EEEecccccCCCCCCCCCCCChhHHHHHHHHH---hcCCCC--------CcCHHHHHHHHHHHHHH
Confidence 999888765 31222111 1235776665554 456543 34667777777777544
No 121
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=75.16 E-value=28 Score=33.03 Aligned_cols=134 Identities=17% Similarity=0.180 Sum_probs=73.3
Q ss_pred HHHHHcCCcEEEEecccCCCC--------CChhhHHHHHHHHHHHhhcCcEEEEe---------cCC-------------
Q 016599 132 QKAKEAGSTRFCMGAAWRDTI--------GRKTNFNQILEYVKDIRDMGMEVCCT---------LGM------------- 181 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~~~--------ge~~~~~~l~~~i~~ik~~g~~i~~t---------~g~------------- 181 (386)
+.+++.|+..|.+-- +..+. +.....++++.+++++++.|+.+++. ++.
T Consensus 55 ~ilk~~G~N~VRlrv-wv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHysD~WadPg~Q~~P~aW~~~~~~ 133 (399)
T 1ur4_A 55 KTLKEAGVNYVRVRI-WNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHYSDFWADPAKQKAPKAWANLNFE 133 (399)
T ss_dssp HHHHHTTCCEEEEEE-CSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECSSSSCCSSSCCCCCGGGTTCCHH
T ss_pred HHHHHCCCCEEEEee-ecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEeccCCccCCcccccCccccccCCHH
Confidence 344568988887621 11111 11135789999999999999997655 221
Q ss_pred --------CCHHHHHHHHHhcc--CeeecccCchHHHHhhhCCCCCHHHHH----HHHHHHHHcC--CeeeEeEEeecCC
Q 016599 182 --------LEKHQAIELKKAGL--TAYNHNLDTSREFYSKIITTRSYDERL----ETLKHVREAG--INVCSGGIIGLGE 245 (386)
Q Consensus 182 --------l~~e~l~~Lk~aG~--~~v~i~le~~~~~~~~i~~~~s~~~~l----~~i~~a~~~G--i~v~~~~i~Glge 245 (386)
.+.+.++.|++.|. +.|.++=|.. ..+.+...+++.. ++++.+++.. ..|.+++.- +.
T Consensus 134 ~l~~~~~~yt~~~l~~l~~~g~~~~~vqvGNEi~----~g~~~~~~~~~la~ll~ag~~aVR~v~p~~~V~ih~~~--~~ 207 (399)
T 1ur4_A 134 DKKTALYQYTKQSLKAMKAAGIDIGMVQVGNETN----GGLAGETDWAKMSQLFNAGSQAVRETDSNILVALHFTN--PE 207 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCEEEEEESSSCS----SCBTTBCCHHHHHHHHHHHHHHHHHHCTTSEEEEEECC--TT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCCCcEEEEccccc----cccCCcccHHHHHHHHHHHHHHHHHhCCCCeEEEEeCC--Cc
Confidence 12355667777764 4555554432 1122233455433 3344455553 344333322 33
Q ss_pred CHHHHHHHHHHHhcCCCCCCeEeeeee
Q 016599 246 AEEDRVGLLHTLATLPTHPESVPINAL 272 (386)
Q Consensus 246 t~ed~~~~l~~l~~l~~~~~~v~~~~f 272 (386)
+.+.+...++.+...+.+.|.|+++.|
T Consensus 208 ~~~~~~~~~d~l~~~g~d~DvIG~syY 234 (399)
T 1ur4_A 208 TSGRYAWIAETLHRHHVDYDVFASSYY 234 (399)
T ss_dssp STTHHHHHHHHHHHTTCCCSEEEEEEC
T ss_pred chHHHHHHHHHHHHcCCCcCeEeEecC
Confidence 334455556666667667888888843
No 122
>4i6k_A Amidohydrolase family protein; enzyme function initiative, isomerase, structural; HET: CIT; 2.28A {Acinetobacter baumannii}
Probab=74.90 E-value=46 Score=29.68 Aligned_cols=207 Identities=14% Similarity=0.091 Sum_probs=106.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcE--EEEecCCCCHHHHHHHHHhccCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME--VCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~--i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.+++++++.+ .+.|+...++++... .+ ..-+++.+++++.... +. +.+.+. ...+.++++.+.|+..|-
T Consensus 53 ~~~e~~l~~~---~~~GV~~~V~v~~~~--~~--~~n~~~~~~~~~~p~r-~~g~~~v~P~-~~~~eL~~l~~~gv~Gi~ 123 (294)
T 4i6k_A 53 ATVQSFISHL---DEHNFTHGVLVQPSF--LG--TNNQAMLNAIQQYPDR-LKGIAVVQHT-TTFNELVNLKAQGIVGVR 123 (294)
T ss_dssp BCHHHHHHHH---HHTTCCEEEEECCGG--GT--TCCHHHHHHHHHSTTT-EEEEECCCTT-CCHHHHHHHHTTTEEEEE
T ss_pred CCHHHHHHHH---HHcCCCeEEEecCcc--cc--cchHHHHHHHHHCCCe-EEEEEEeCCc-ccHHHHHHHHHCCCcEEE
Confidence 4677776554 468998887765321 11 1225567766654321 11 112232 356788888888877666
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTP 279 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~ 279 (386)
+...... .+.-.-+.+...++.+.+.|+.+.+++ ...++.++.+.+++.+ . .+.+. +-|.+
T Consensus 124 l~~~~~~------~~~~~~~~~~~~~~~a~~~glpv~iH~------~~~~l~~~~~~l~~~p--~-~~Vi~----H~g~p 184 (294)
T 4i6k_A 124 LNLFGLN------LPALNTPDWQKFLRNVESLNWQVELHA------PPKYLVQLLPQLNEYS--F-DVVID----HFGRV 184 (294)
T ss_dssp EECTTSC------CCCSSSHHHHHHHHHHHHTTCEEEEEC------CHHHHHHHHHHHTTSS--S-CEEES----GGGCC
T ss_pred eccCCCC------CCCcccHHHHHHHHHHHHcCCEEEEee------CcchHHHHHHHHHHCC--C-CEEEE----CCCCC
Confidence 5332100 011123566778889999999876543 1345666777777663 2 22221 11222
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccC----------hhHHHhhhhcCccccccCCcc--ccCC-CCCh
Q 016599 280 LQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS----------MPEQALCFLAGANSIFTGEKL--LTTP-NNDF 346 (386)
Q Consensus 280 l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~----------~~~~~~~l~~Gan~~~~g~~~--~t~~-~~~~ 346 (386)
...... .......+.++++ .|+.++.+++- ..+. +......-..|.+.++.|..+ .... .++.
T Consensus 185 ~~~~g~-~~~~~~~~~~l~~--~~nv~~k~Sg~-~~~~~~~~~~~~~~~~l~~~~~~~g~dRll~gSD~P~~~~~~~~~y 260 (294)
T 4i6k_A 185 DPVKGI-EDPDYQKFLSLLN--VKQHWIKVSGF-YRLGATPSNINIAQQAYNIFKEKGFLHKLIWGSDWPHTQHESLITY 260 (294)
T ss_dssp CTTTCT-TCHHHHHHHHHCC--TTTEEEECCCG-GGSSSTTHHHHHHHHHHHHHHHHTCGGGEECCCCBTCTTCTTTCCH
T ss_pred CCCCCC-CCHHHHHHHHHHh--CCCEEEEeccc-ccccccCCCchhhHHHHHHHHHHhCcccEEEeCCCCCCCCcCCCCH
Confidence 211111 1112222223222 46777777642 2222 122222334689999877532 2222 2466
Q ss_pred hHHHHHHHHcCCCc
Q 016599 347 DADQLMFKVLGLTP 360 (386)
Q Consensus 347 ~~~~~~i~~~G~~p 360 (386)
.+.++.+.++++.+
T Consensus 261 ~~~~~~l~~~~~~~ 274 (294)
T 4i6k_A 261 EDAIKAFKQIVFDK 274 (294)
T ss_dssp HHHHHHHHHHCCCH
T ss_pred HHHHHHHHHHCCCH
Confidence 66778888887544
No 123
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=74.67 E-value=40 Score=28.87 Aligned_cols=197 Identities=14% Similarity=0.132 Sum_probs=93.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCC-CHHHHHHHHHhccCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGML-EKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l-~~e~l~~Lk~aG~~~v~i 200 (386)
+++...+.++.+.+.|++-+.+.-.+.+.. + ....-.+.++++++. +..+.+..-.. ..+.++.+.++|+|.+.+
T Consensus 21 d~~~~~~~i~~~~~~G~d~i~l~~~dg~f~--~-~~~~~~~~i~~l~~~~~~~~~v~l~vnd~~~~v~~~~~~Gad~v~v 97 (230)
T 1rpx_A 21 NFSKLGEQVKAIEQAGCDWIHVDVMDGRFV--P-NITIGPLVVDSLRPITDLPLDVHLMIVEPDQRVPDFIKAGADIVSV 97 (230)
T ss_dssp CGGGHHHHHHHHHHTTCCCEEEEEEBSSSS--S-CBCCCHHHHHHHGGGCCSCEEEEEESSSHHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeeccCCcc--c-ccccCHHHHHHHHhccCCcEEEEEEecCHHHHHHHHHHcCCCEEEE
Confidence 344556666777778887666532111110 0 011124666666643 33322211111 345788899999999987
Q ss_pred ccC--chHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCC
Q 016599 201 NLD--TSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGT 278 (386)
Q Consensus 201 ~le--~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT 278 (386)
..+ .. ... .+.++.+++.|+.+...+. .+ |..+.. +.+....+.+-+..+.| |.
T Consensus 98 h~~~~~~----------~~~---~~~~~~~~~~g~~ig~~~~--p~-t~~e~~------~~~~~~~d~vl~~~~~p--g~ 153 (230)
T 1rpx_A 98 HCEQSST----------IHL---HRTINQIKSLGAKAGVVLN--PG-TPLTAI------EYVLDAVDLVLIMSVNP--GF 153 (230)
T ss_dssp ECSTTTC----------SCH---HHHHHHHHHTTSEEEEEEC--TT-CCGGGG------TTTTTTCSEEEEESSCT--TC
T ss_pred EecCccc----------hhH---HHHHHHHHHcCCcEEEEeC--CC-CCHHHH------HHHHhhCCEEEEEEEcC--CC
Confidence 655 31 122 2455666777876544433 22 322221 11111256664444444 32
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCC----CcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHHH
Q 016599 279 PLQDQKPVEIWEMIRMIATARIVMP----KAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMFK 354 (386)
Q Consensus 279 ~l~~~~~~s~~e~~~~~a~~R~~lp----~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i~ 354 (386)
.-.... ....+ .+...|...+ +..+-+.+| + +++.....+.+||+.+..|..+... .++.+..+.++
T Consensus 154 ~g~~~~-~~~~~---~i~~l~~~~~~~~~~~pi~v~GG-I--~~~n~~~~~~aGad~vvvgSaI~~a--~dp~~a~~~l~ 224 (230)
T 1rpx_A 154 GGQSFI-ESQVK---KISDLRKICAERGLNPWIEVDGG-V--GPKNAYKVIEAGANALVAGSAVFGA--PDYAEAIKGIK 224 (230)
T ss_dssp SSCCCC-TTHHH---HHHHHHHHHHHHTCCCEEEEESS-C--CTTTHHHHHHHTCCEEEESHHHHTS--SCHHHHHHHHH
T ss_pred CCcccc-HHHHH---HHHHHHHHHHhcCCCceEEEECC-C--CHHHHHHHHHcCCCEEEEChhhhCC--CCHHHHHHHHH
Confidence 211111 22222 2233333322 222223332 2 2333344677899999888744322 34666666555
Q ss_pred H
Q 016599 355 V 355 (386)
Q Consensus 355 ~ 355 (386)
+
T Consensus 225 ~ 225 (230)
T 1rpx_A 225 T 225 (230)
T ss_dssp T
T ss_pred H
Confidence 4
No 124
>1r3s_A URO-D, uroporphyrinogen decarboxylase, UPD; uroporphyrinogen decarboxylase coproporphyrinogen, X-RAY crystallography, lyase; HET: 1CP; 1.65A {Homo sapiens} SCOP: c.1.22.1 PDB: 1r3t_A* 1r3r_A 1r3q_A* 1r3y_A* 1uro_A 3gvq_A 3gvr_A 1r3v_A* 3gvv_A 3gvw_A 1jph_A 1r3w_A* 3gw3_A 1jpi_A 1jpk_A 3gw0_A 2q71_A* 2q6z_A*
Probab=74.63 E-value=41 Score=31.27 Aligned_cols=69 Identities=13% Similarity=0.125 Sum_probs=42.1
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhh-----HHHHHHHHHHHh-hc------CcEE-EEecCCCCHHHHHHHHHhccC
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTN-----FNQILEYVKDIR-DM------GMEV-CCTLGMLEKHQAIELKKAGLT 196 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~-----~~~l~~~i~~ik-~~------g~~i-~~t~g~l~~e~l~~Lk~aG~~ 196 (386)
.++...+.|++.|.+...+..... |.. .+++.++++.++ +. ++.+ ....|. ...+..|++.|++
T Consensus 202 ~~~~~i~aGad~i~i~D~~~~~ls-p~~f~ef~~p~~k~i~~~i~~~~~~~g~~~~p~i~~~~G~--~~~l~~l~~~g~d 278 (367)
T 1r3s_A 202 YLVGQVVAGAQALQLFESHAGHLG-PQLFNKFALPYIRDVAKQVKARLREAGLAPVPMIIFAKDG--HFALEELAQAGYE 278 (367)
T ss_dssp HHHHHHHTTCSEEEEEETTGGGSC-HHHHHHHTHHHHHHHHHHHHHHHHHTTCCCCCEEEEETTC--GGGHHHHTTSSCS
T ss_pred HHHHHHHhCCCEEEEecCccccCC-HHHHHHHhHHHHHHHHHHHhhhhccccCCCCCeEEEcCCc--HHHHHHHHhcCCC
Confidence 344455779887766433332222 322 255666677777 54 4553 445554 5678899999999
Q ss_pred eeecc
Q 016599 197 AYNHN 201 (386)
Q Consensus 197 ~v~i~ 201 (386)
.+++.
T Consensus 279 ~i~~d 283 (367)
T 1r3s_A 279 VVGLD 283 (367)
T ss_dssp EEECC
T ss_pred EEEeC
Confidence 88764
No 125
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=74.48 E-value=25 Score=33.48 Aligned_cols=124 Identities=19% Similarity=0.212 Sum_probs=68.3
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeeecccCch-
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS- 205 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~- 205 (386)
.+.++.+.+.|++-|++.+. .|.+ +.+.+.++.+++. ++.+... +..+.+.++.+.++|+|.|.++.+..
T Consensus 146 ~e~~~~lveaGvdvIvldta----~G~~---~~~~e~I~~ik~~~~i~Vi~g-~V~t~e~A~~a~~aGAD~I~vG~g~Gs 217 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSA----HGHS---LNIIRTLKEIKSKMNIDVIVG-NVVTEEATKELIENGADGIKVGIGPGS 217 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCS----CCSB---HHHHHHHHHHHTTCCCEEEEE-EECSHHHHHHHHHTTCSEEEECC----
T ss_pred HHHHHHHHHcCCCEEEEeCC----CCCc---ccHHHHHHHHHhcCCCeEEEe-ecCCHHHHHHHHHcCCCEEEEeCCCCc
Confidence 45566777789988877432 1222 4567788888764 7776542 23678999999999999999866432
Q ss_pred HHHHhhhCC-C-CCHHHHHHHHHHHHHcCCeeeE-eEEeecCCCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 206 REFYSKIIT-T-RSYDERLETLKHVREAGINVCS-GGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 206 ~~~~~~i~~-~-~s~~~~l~~i~~a~~~Gi~v~~-~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
....+.... + ..+..+.+..+.+++.++++-. +-| -+.+|+.+.+. +| .+.+.+
T Consensus 218 ~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI----~~~~di~kala----lG--Ad~V~v 274 (400)
T 3ffs_A 218 ICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGI----RYSGDIGKALA----VG--ASSVMI 274 (400)
T ss_dssp -----CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCC----CSHHHHHHHHT----TT--CSEEEE
T ss_pred CcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCC----CCHHHHHHHHH----cC--CCEEEE
Confidence 111111111 1 1233333444444445665322 222 25677766653 44 555555
No 126
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=74.23 E-value=23 Score=33.55 Aligned_cols=206 Identities=12% Similarity=0.129 Sum_probs=112.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCC---ChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG---RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~g---e~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+.+.+.+.++.+++.|+.-+.++.-...+.. ..+..+.+..+.+..++.|+++.++. .+.+.++.+.+. ++.+.
T Consensus 154 s~e~a~~~a~~~k~aGa~~vk~q~fkprts~~~f~gl~~egl~~L~~~~~~~Gl~~~te~--~d~~~~~~l~~~-vd~lk 230 (385)
T 3nvt_A 154 SYEQVAAVAESIKAKGLKLIRGGAFKPRTSPYDFQGLGLEGLKILKRVSDEYGLGVISEI--VTPADIEVALDY-VDVIQ 230 (385)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC--CSGGGHHHHTTT-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeEEcccccCCCChHhhcCCCHHHHHHHHHHHHHcCCEEEEec--CCHHHHHHHHhh-CCEEE
Confidence 7899999999999999986665542111100 00223555444444457899987764 567778888777 88888
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeee-eeecCCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINA-LLAVKGT 278 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~-f~P~~gT 278 (386)
|+--.. .++ .-++.+.+.|.+|. +=-|..-|.+|+...++.+..-| +.+.+-... ..-+|..
T Consensus 231 Igs~~~----------~n~----~LL~~~a~~gkPVi--lk~G~~~t~~e~~~Ave~i~~~G-n~~i~L~~rG~s~yp~~ 293 (385)
T 3nvt_A 231 IGARNM----------QNF----ELLKAAGRVDKPIL--LKRGLSATIEEFIGAAEYIMSQG-NGKIILCERGIRTYEKA 293 (385)
T ss_dssp ECGGGT----------TCH----HHHHHHHTSSSCEE--EECCTTCCHHHHHHHHHHHHTTT-CCCEEEEECCBCCSCCS
T ss_pred ECcccc----------cCH----HHHHHHHccCCcEE--EecCCCCCHHHHHHHHHHHHHcC-CCeEEEEECCCCCCCCC
Confidence 854221 122 34455566676532 22244458999999999999887 333333332 2222221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCC-cceeec--CcccccChhHHHhhhhcCccccccCC-----ccccC---CCCChh
Q 016599 279 PLQDQKPVEIWEMIRMIATARIVMPK-AMVRLS--AGRVRFSMPEQALCFLAGANSIFTGE-----KLLTT---PNNDFD 347 (386)
Q Consensus 279 ~l~~~~~~s~~e~~~~~a~~R~~lp~-~~i~i~--~g~~~~~~~~~~~~l~~Gan~~~~g~-----~~~t~---~~~~~~ 347 (386)
+... ++ ++.+...+..+.- .+.-.+ .|.-.+-+.....+...||+.++.+. +-. + ...+++
T Consensus 294 ~~~~---ld----l~~i~~lk~~~~lpV~~D~th~~G~r~~v~~~a~AAvA~GA~gl~iE~H~~pd~a~-~D~~~sl~p~ 365 (385)
T 3nvt_A 294 TRNT---LD----ISAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVAL-SDSAQQMDIP 365 (385)
T ss_dssp SSSB---CC----TTHHHHHHHHBSSCEEEEHHHHHCCGGGHHHHHHHHHHTTCSEEEEEBCSCGGGCS-SCTTTSBCHH
T ss_pred Cccc---cC----HHHHHHHHHhcCCCEEEcCCCCCCccchHHHHHHHHHHhCCCEEEEEecCChhhcC-CcccccCCHH
Confidence 2211 11 2223334443221 111111 22222323445668889999876442 111 2 235777
Q ss_pred HHHHHHHHc
Q 016599 348 ADQLMFKVL 356 (386)
Q Consensus 348 ~~~~~i~~~ 356 (386)
+...|+++.
T Consensus 366 el~~lv~~i 374 (385)
T 3nvt_A 366 EFEEFWNAI 374 (385)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 777776653
No 127
>2inf_A URO-D, UPD, uroporphyrinogen decarboxylase; (alpha-beta)8 barrel, eight parallel beta strands surrounded by eight alpha helices, lyase; 2.30A {Bacillus subtilis}
Probab=73.08 E-value=48 Score=30.67 Aligned_cols=69 Identities=10% Similarity=0.177 Sum_probs=41.6
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhh-----HHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeecc
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTN-----FNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~-----~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.++...+.|++.+.+...+..... |.. .+++.++++.+++.+..+ ....|. ...+..|.+.|++.+++.
T Consensus 198 ~~~~~~~aGad~i~i~D~~~~~ls-p~~f~ef~~p~~~~i~~~i~~~g~~~i~~~~G~--~~~l~~l~~~g~d~~~~d 272 (359)
T 2inf_A 198 YVKAQIKAGAKAIQIFDSWVGALN-QADYRTYIKPVMNRIFSELAKENVPLIMFGVGA--SHLAGDWHDLPLDVVGLD 272 (359)
T ss_dssp HHHHHHHTTCSEEEEECTTGGGSC-HHHHHHHTHHHHHHHHHHHGGGCSCEEEECTTC--GGGHHHHHTSSCSEEECC
T ss_pred HHHHHHHhCCCEEEEeCCccccCC-HHHHHHHhHHHHHHHHHHHHHcCCcEEEEcCCc--HHHHHHHHHhCCCEEEeC
Confidence 444455789887766433322222 322 245556666676656553 444554 558888999999988763
No 128
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=73.00 E-value=24 Score=34.07 Aligned_cols=80 Identities=10% Similarity=0.130 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCC----------CC--ChhhHHHHHHHHHHHhh-c--CcEEEEecCCCCHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT----------IG--RKTNFNQILEYVKDIRD-M--GMEVCCTLGMLEKHQ 186 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~----------~g--e~~~~~~l~~~i~~ik~-~--g~~i~~t~g~l~~e~ 186 (386)
++.+++.+.++.+.+.|++.+.+.+..... +| .+...+.-+++++.+++ . .+++..+.|..+.+.
T Consensus 308 ~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~GGI~s~~D 387 (443)
T 1tv5_A 308 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFSGLD 387 (443)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEESSCCSHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEECCCCCHHH
Confidence 567799999999999999999886643210 11 01124456778888874 3 688888889999999
Q ss_pred HHHHHHhccCeeecc
Q 016599 187 AIELKKAGLTAYNHN 201 (386)
Q Consensus 187 l~~Lk~aG~~~v~i~ 201 (386)
+.++..+|++.|.++
T Consensus 388 A~e~l~aGAd~Vqig 402 (443)
T 1tv5_A 388 ALEKIEAGASVCQLY 402 (443)
T ss_dssp HHHHHHTTEEEEEES
T ss_pred HHHHHHcCCCEEEEc
Confidence 888889999998874
No 129
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=72.74 E-value=42 Score=28.26 Aligned_cols=162 Identities=16% Similarity=0.136 Sum_probs=89.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh-hcCcEEEEe-cCCCCHHHHHHHHHhccCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCT-LGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik-~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.+++++.+.++.+.+.|++.+.+... .+... +.++.++ ..+..+.+. .+..+.+.++...++|++.+.
T Consensus 16 ~d~~~~~~~~~~~~~~G~~~i~l~~~------~~~~~----~~i~~i~~~~~~~l~vg~g~~~~~~~i~~a~~~Gad~V~ 85 (212)
T 2v82_A 16 ITPDEALAHVGAVIDAGFDAVEIPLN------SPQWE----QSIPAIVDAYGDKALIGAGTVLKPEQVDALARMGCQLIV 85 (212)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEETT------STTHH----HHHHHHHHHHTTTSEEEEECCCSHHHHHHHHHTTCCEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEeCC------ChhHH----HHHHHHHHhCCCCeEEEeccccCHHHHHHHHHcCCCEEE
Confidence 57889999999998899988877431 12222 3444443 234443332 234678899999999999997
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTP 279 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~ 279 (386)
++.. + .+.++.+++.|..+ ++|. .|.+++.. ..+.+ ++.+.++ | . .
T Consensus 86 ~~~~-------------~----~~~~~~~~~~g~~~----~~g~-~t~~e~~~----a~~~G--~d~v~v~---~--t-~ 131 (212)
T 2v82_A 86 TPNI-------------H----SEVIRRAVGYGMTV----CPGC-ATATEAFT----ALEAG--AQALKIF---P--S-S 131 (212)
T ss_dssp CSSC-------------C----HHHHHHHHHTTCEE----ECEE-CSHHHHHH----HHHTT--CSEEEET---T--H-H
T ss_pred eCCC-------------C----HHHHHHHHHcCCCE----Eeec-CCHHHHHH----HHHCC--CCEEEEe---c--C-C
Confidence 4321 1 12345667788764 3342 46666532 23454 6666641 1 1 0
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCC-CcceeecCcccccChhHHHhhhhcCccccccCCccc
Q 016599 280 LQDQKPVEIWEMIRMIATARIVMP-KAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLL 339 (386)
Q Consensus 280 l~~~~~~s~~e~~~~~a~~R~~lp-~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~ 339 (386)
.... ..+...+...+ +..+ +..|-++ .+.-...+.+||+.+..|..+.
T Consensus 132 -----~~g~----~~~~~l~~~~~~~ipv-ia~GGI~--~~~i~~~~~~Ga~gv~vGsai~ 180 (212)
T 2v82_A 132 -----AFGP----QYIKALKAVLPSDIAV-FAVGGVT--PENLAQWIDAGCAGAGLGSDLY 180 (212)
T ss_dssp -----HHCH----HHHHHHHTTSCTTCEE-EEESSCC--TTTHHHHHHHTCSEEEECTTTC
T ss_pred -----CCCH----HHHHHHHHhccCCCeE-EEeCCCC--HHHHHHHHHcCCCEEEEChHHh
Confidence 1122 22333333444 2222 2223234 2223456678999998887443
No 130
>4gxw_A Adenosine deaminase; amidohydrolase, COG1816, EFI, structural genomics, hydrolase; 1.30A {Burkholderia ambifaria}
Probab=71.86 E-value=37 Score=32.00 Aligned_cols=97 Identities=11% Similarity=0.073 Sum_probs=55.9
Q ss_pred CCHHHHHHHHHHHHHc---CCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCC--CHHH-HHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEA---GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML--EKHQ-AIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~---G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l--~~e~-l~~Lk~aG~ 195 (386)
.++++..+.++.+.+. ++-.|-+.|.. ..+.| ..+.+.++.+++.|+.+.+..|.. ..+. .+.+...|+
T Consensus 162 ~~~e~a~~~~~~a~~~~~~~VvG~dL~g~E--~~~p~---~~f~~~f~~ar~~Gl~~t~HAGE~~~p~~~i~~al~~lga 236 (380)
T 4gxw_A 162 QDPDEAVAIVDWMKANRADEVAGIGIDYRE--NDRPP---ELFWKAYRDARAAGFRTTAHAGEFGMPWRNVETAVDLLHV 236 (380)
T ss_dssp SCHHHHHHHHHHHHHTCCTTBCEEEEESCC--TTCCG---GGGHHHHHHHHHTTCEEEEEESCTTCCHHHHHHHHHTSCC
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeecCCC--CCCCH---HHHHHHHHHHHHcCCCeeeeccccCCchHHHHHHHHHcCC
Confidence 5677777766665543 44455555532 22223 335556666777788877777753 2333 344445688
Q ss_pred CeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE
Q 016599 196 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCS 237 (386)
Q Consensus 196 ~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~ 237 (386)
++|.+|+...+ + -+.++.+++.||.+.+
T Consensus 237 ~RIgHG~~~~~----------d----~~L~~~l~~~~I~lEv 264 (380)
T 4gxw_A 237 DRVDHGYTIVD----------N----PELCARYAERGIVFTV 264 (380)
T ss_dssp SEEEECGGGGG----------C----HHHHHHHHHHTCEEEE
T ss_pred cccccceeecc----------C----hHHHHHHHHhCceeEE
Confidence 88888876651 0 1235566677776443
No 131
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=71.73 E-value=45 Score=28.16 Aligned_cols=153 Identities=15% Similarity=0.104 Sum_probs=87.3
Q ss_pred HcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec----CC-CCHHHHHHHHHh-ccCeeecccCchHHHH
Q 016599 136 EAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GM-LEKHQAIELKKA-GLTAYNHNLDTSREFY 209 (386)
Q Consensus 136 ~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~----g~-l~~e~l~~Lk~a-G~~~v~i~le~~~~~~ 209 (386)
+...+.+++.+|. ...+.++++.+|+.+-.+.++. |. -++..++.|++. +++.+--
T Consensus 27 ~s~~~~ifll~g~---------i~~l~~~v~~lk~~~K~v~Vh~Dli~Gls~d~~ai~fL~~~~~pdGIIs--------- 88 (192)
T 3kts_A 27 ELDLTYMVMLETH---------VAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIIS--------- 88 (192)
T ss_dssp TSSCCEEEECSEE---------TTTHHHHHHHHHHTTCEEEEEGGGEETCCCSHHHHHHHHHTTCCSEEEE---------
T ss_pred cCCCCEEEEecCc---------HHHHHHHHHHHHHcCCeEEEecCchhccCCcHHHHHHHHhCCCCCEEEe---------
Confidence 3455556555432 2356777777887776655554 33 367778888763 5544321
Q ss_pred hhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHH
Q 016599 210 SKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIW 289 (386)
Q Consensus 210 ~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~ 289 (386)
++ ...++.+++.|+.+--.+ | +-+ -..+...++.+...+ |+.+- +.| | +-+
T Consensus 89 -----Tk-----~~~i~~Ak~~gL~tIqR~-F-liD-S~al~~~~~~i~~~~--PD~iE---iLP--G--------i~p- 139 (192)
T 3kts_A 89 -----TR-----GNAIMKAKQHKMLAIQRL-F-MID-SSAYNKGVALIQKVQ--PDCIE---LLP--G--------IIP- 139 (192)
T ss_dssp -----SC-----HHHHHHHHHTTCEEEEEE-E-CCS-HHHHHHHHHHHHHHC--CSEEE---EEC--T--------TCH-
T ss_pred -----Cc-----HHHHHHHHHCCCeEEEEE-E-EEE-cchHHHHHHHHhhcC--CCEEE---ECC--c--------hhH-
Confidence 11 367889999999743332 2 222 344566777777764 77663 333 4 123
Q ss_pred HHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccC
Q 016599 290 EMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTT 341 (386)
Q Consensus 290 e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~ 341 (386)
+++ ...+....- .-+.+|.+.- .+.-..++.+||+.+.++..-++.
T Consensus 140 ~iI---~~i~~~~~~--PiIaGGlI~~-~edv~~al~aGA~aVsTs~~~LW~ 185 (192)
T 3kts_A 140 EQV---QKMTQKLHI--PVIAGGLIET-SEQVNQVIASGAIAVTTSNKHLWE 185 (192)
T ss_dssp HHH---HHHHHHHCC--CEEEESSCCS-HHHHHHHHTTTEEEEEECCGGGGT
T ss_pred HHH---HHHHHhcCC--CEEEECCcCC-HHHHHHHHHcCCeEEEeCCHHHhC
Confidence 233 333333221 2244555543 344577899999999888765553
No 132
>2p10_A MLL9387 protein; putative phosphonopyruvate hydrolase, structural genomics, J center for structural genomics, JCSG; HET: MSE; 2.15A {Mesorhizobium loti} SCOP: c.1.12.9
Probab=71.48 E-value=28 Score=31.30 Aligned_cols=124 Identities=15% Similarity=0.161 Sum_probs=69.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCC------------CChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI------------GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIE 189 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~------------ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~ 189 (386)
...+.+++ .+++.|+..+ +- ++|. -....++...++|+..++.++.... -..+++..+.
T Consensus 108 ~~~g~~Le---~lk~~Gf~Gv-~N---~ptvglidG~fr~~LEE~gm~~~~eve~I~~A~~~gL~Ti~--~v~~~eeA~a 178 (286)
T 2p10_A 108 MVMSTFLR---ELKEIGFAGV-QN---FPTVGLIDGLFRQNLEETGMSYAQEVEMIAEAHKLDLLTTP--YVFSPEDAVA 178 (286)
T ss_dssp CCHHHHHH---HHHHHTCCEE-EE---CSCGGGCCHHHHHHHHHTTCCHHHHHHHHHHHHHTTCEECC--EECSHHHHHH
T ss_pred cCHHHHHH---HHHHhCCceE-EE---CCCcccccchhhhhHhhcCCCHHHHHHHHHHHHHCCCeEEE--ecCCHHHHHH
Confidence 35666664 4556687777 21 1211 1125678899999999999886321 1257999999
Q ss_pred HHHhccCeeecccCch-HHHHhhhC--CCCCHHHHHHHH----HHHHHcCCeeeEeEEee-cCCCHHHHHHHHHHHh
Q 016599 190 LKKAGLTAYNHNLDTS-REFYSKII--TTRSYDERLETL----KHVREAGINVCSGGIIG-LGEAEEDRVGLLHTLA 258 (386)
Q Consensus 190 Lk~aG~~~v~i~le~~-~~~~~~i~--~~~s~~~~l~~i----~~a~~~Gi~v~~~~i~G-lget~ed~~~~l~~l~ 258 (386)
+.++|.|.|.+.+--- -+ .|. ...+.++..+.+ +.+++..-.+ ..+..| .-.+.+|+...++...
T Consensus 179 mA~agpDiI~~h~glT~gg---lIG~~~avs~~~~~e~i~~i~~a~~~vnpdv-ivLc~gGpIstpeDv~~~l~~t~ 251 (286)
T 2p10_A 179 MAKAGADILVCHMGLTTGG---AIGARSGKSMDDCVSLINECIEAARTIRDDI-IILSHGGPIANPEDARFILDSCQ 251 (286)
T ss_dssp HHHHTCSEEEEECSCC------------CCCHHHHHHHHHHHHHHHHHHCSCC-EEEEESTTCCSHHHHHHHHHHCT
T ss_pred HHHcCCCEEEECCCCCCCC---cccCCCcccHHHhHHHHHHHHHHHHHhCCCc-EEEecCCCCCCHHHHHHHHhcCC
Confidence 9999999987644311 01 111 123555533333 3344433222 112222 2368899888886643
No 133
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=71.10 E-value=81 Score=31.38 Aligned_cols=186 Identities=12% Similarity=0.087 Sum_probs=96.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHh--ccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKA--GLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~a--G~~~v 198 (386)
.+.+++++.+++..+.|.+-+-+.-|. ....++ +.+..++..+++ .++++++ ...+.+.++.-.++ |.+-|
T Consensus 337 ~~~~~a~~~A~~~v~~GAdiIDIgpg~-~~v~~~---ee~~rvv~~i~~~~~vpisI--DT~~~~v~eaal~~~~G~~iI 410 (566)
T 1q7z_A 337 GNEEIVIKEAKTQVEKGAEVLDVNFGI-ESQIDV---RYVEKIVQTLPYVSNVPLSL--DIQNVDLTERALRAYPGRSLF 410 (566)
T ss_dssp TCCHHHHHHHHHHHHTTCSEEEEECSS-GGGSCH---HHHHHHHHHHHHHTCSCEEE--ECCCHHHHHHHHHHCSSCCEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCC-CCCCHH---HHHHHHHHHHHhhCCceEEE--eCCCHHHHHHHHHhcCCCCEE
Confidence 467999999999999999877775221 111223 444444444443 3555544 34578888888888 87765
Q ss_pred e-cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEee-cCCCHHH----HHHHHHHHhcCCCCCCeEeeeee
Q 016599 199 N-HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIG-LGEAEED----RVGLLHTLATLPTHPESVPINAL 272 (386)
Q Consensus 199 ~-i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~G-lget~ed----~~~~l~~l~~l~~~~~~v~~~~f 272 (386)
+ ++.+ . ++.-+.++.+.++|..+..--+-| ...|.++ +.+.++.+.+.|.. +.+.+-+.
T Consensus 411 Ndis~~-------------~-~~~~~~~~~~~~~g~~vV~m~~~~~~p~t~~~~~~~l~~~~~~a~~~Gi~-~~IilDPg 475 (566)
T 1q7z_A 411 NSAKVD-------------E-EELEMKINLLKKYGGTLIVLLMGKDVPKSFEERKEYFEKALKILERHDFS-DRVIFDPG 475 (566)
T ss_dssp EEEESC-------------H-HHHHHHHHHHHHHCCEEEEESCSSSCCCSHHHHHHHHHHHHHHHHHTTCG-GGEEEECC
T ss_pred EECCcc-------------h-hhHHHHHHHHHHhCCeEEEEeCCCCCcCCHHHHHHHHHHHHHHHHHCCCC-CcEEEeCC
Confidence 5 2211 1 222345567788887644322222 2234443 44555666666622 44444332
Q ss_pred eecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccC--------hhHHHhhhhcCccccccCC
Q 016599 273 LAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS--------MPEQALCFLAGANSIFTGE 336 (386)
Q Consensus 273 ~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~--------~~~~~~~l~~Gan~~~~g~ 336 (386)
+-..| +.. ...++++.+...+.+ ..-+-+..++.++. .-....++..|++-+..++
T Consensus 476 ~~~ig--fgk----~~~~~l~~~~~~~~~--g~p~l~G~Snksf~~~~~~~l~~t~a~~a~~~G~~i~rvh~ 539 (566)
T 1q7z_A 476 VLPLG--AEG----KPVEVLKTIEFISSK--GFNTTVGLSNLSFGLPDRSYYNTAFLVLGISKGLSSAIMNP 539 (566)
T ss_dssp CCCTT--TTC----CHHHHHHHHHHHHHT--TCEECCBGGGGSTTSTTHHHHHHHHHHHHHHTTCCEEEECT
T ss_pred CCccc--CcH----HHHHHHHHHHHHHhC--CCCEEEEeCcccccCCHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 21112 222 445556666655544 21111122222221 1122455667887775553
No 134
>1j93_A UROD, uroporphyrinogen decarboxylase; beta barrel, plastidial enzyme, crystallographic dimer, lyase; 2.30A {Nicotiana tabacum} SCOP: c.1.22.1
Probab=70.51 E-value=61 Score=29.83 Aligned_cols=71 Identities=7% Similarity=0.120 Sum_probs=38.9
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhh-----HHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTN-----FNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~-----~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
.++...+.|++.+.+...+.... .|.. .+++.++++.+++. ++.+....+- ....+..|.+.|++.+++.-
T Consensus 198 ~~~~~~~aGad~iqi~D~~~~~l-sp~~f~ef~~p~~~~i~~~i~~~~~~~~~ih~c~g-~~~~l~~l~~~g~d~~~~d~ 275 (353)
T 1j93_A 198 YIRYQADSGAQAVQIFDSWATEL-SPVDFEEFSLPYLKQIVDSVKLTHPNLPLILYASG-SGGLLERLPLTGVDVVSLDW 275 (353)
T ss_dssp HHHHHHHTTCSEEEEECGGGGGS-CHHHHHHHTHHHHHHHHHHHHHHSTTCCEEEECSS-CTTTGGGGGGGCCSEEECCT
T ss_pred HHHHHHHhCCCEEEEeCcccccC-CHHHHHHHhHHHHHHHHHHHHHhCCCCCEEEECCC-hHHHHHHHHhcCCCEEEeCC
Confidence 34445578988776643332112 2322 24555666666654 4553222222 23467788889999887643
No 135
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=70.38 E-value=31 Score=30.69 Aligned_cols=75 Identities=17% Similarity=0.132 Sum_probs=49.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
++.+++...++.+.+.|.+-|--.+|.. +.|. ..+++.- +++.-.-.+.+-..-|..+.+.+..|.++|.+++-.
T Consensus 170 Lt~eei~~A~~ia~eaGADfVKTSTGf~-~~GA--T~edV~l-m~~~vg~~v~VKaAGGIrt~~~al~mi~aGA~RiGt 244 (260)
T 3r12_A 170 LDTEEKIAACVISKLAGAHFVKTSTGFG-TGGA--TAEDVHL-MKWIVGDEMGVKASGGIRTFEDAVKMIMYGADRIGT 244 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSS-SCCC--CHHHHHH-HHHHHCTTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCcCEEEcCCCCC-CCCC--CHHHHHH-HHHHhCCCceEEEeCCCCCHHHHHHHHHcCCceeec
Confidence 5788998888888889987665555432 2231 2333222 222222345566777888889999999999998764
No 136
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=70.29 E-value=55 Score=30.54 Aligned_cols=126 Identities=10% Similarity=0.089 Sum_probs=67.0
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
+++..++.++.+++ .|-+ .+.+-. + .+ ...++..++++.+.+.++ ..-.+-. +.+.++++++.- .+++
T Consensus 171 ~~~~~~e~v~avr~a~g~d~~l~vDa--n--~~--~~~~~a~~~~~~l~~~~i-~iE~P~~-~~~~~~~l~~~~--~iPI 240 (379)
T 2rdx_A 171 DWQSDIDRIRACLPLLEPGEKAMADA--N--QG--WRVDNAIRLARATRDLDY-ILEQPCR-SYEECQQVRRVA--DQPM 240 (379)
T ss_dssp CHHHHHHHHHHHGGGSCTTCEEEEEC--T--TC--SCHHHHHHHHHHTTTSCC-EEECCSS-SHHHHHHHHTTC--CSCE
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEC--C--CC--CCHHHHHHHHHHHHhCCe-EEeCCcC-CHHHHHHHHhhC--CCCE
Confidence 45555666666554 3422 232211 1 11 234666667766666665 3212212 566666666531 2332
Q ss_pred c----cCchH---HHHh---------hhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 201 N----LDTSR---EFYS---------KIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 201 ~----le~~~---~~~~---------~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
. +.+.. +..+ ++.+-....+.++.++.+++.|+.+..+. ..++.--+...+.+...++
T Consensus 241 ~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~---~~es~i~~~a~~~laaa~~ 314 (379)
T 2rdx_A 241 KLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRTRDFLIDNRMPVVAED---SWGGEIASAAVAHFAASTP 314 (379)
T ss_dssp EECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHHHHHHHHTTCCEEEEC---SBCSHHHHHHHHHHHHTSC
T ss_pred EEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHHHHHHHHcCCeEEEee---ccCcHHHHHHHHHHHHcCC
Confidence 1 11111 1111 11223468899999999999999966653 2466666777777777764
No 137
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=70.27 E-value=42 Score=32.72 Aligned_cols=119 Identities=14% Similarity=0.146 Sum_probs=70.6
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecccC
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 203 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le 203 (386)
+..+.++.+.+.|++.+.+.+.. +. .+.+.+.++.+++. ++.+... +..+.+.++.+.++|+|.+.++..
T Consensus 229 ~~~~~a~~l~~aG~d~I~id~a~----g~---~~~~~~~v~~i~~~~p~~~Vi~g-~v~t~e~a~~l~~aGaD~I~vg~g 300 (490)
T 4avf_A 229 DTGERVAALVAAGVDVVVVDTAH----GH---SKGVIERVRWVKQTFPDVQVIGG-NIATAEAAKALAEAGADAVKVGIG 300 (490)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC----CS---BHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHTTCSEEEECSS
T ss_pred chHHHHHHHhhcccceEEecccC----Cc---chhHHHHHHHHHHHCCCceEEEe-eeCcHHHHHHHHHcCCCEEEECCC
Confidence 44556677778899988775432 21 24677888888754 5555442 246789999999999999988543
Q ss_pred ch-H-HHHhhhCC-CCCHHHHHHHHHHHHHcCCeeeE-eEEeecCCCHHHHHHHHHH
Q 016599 204 TS-R-EFYSKIIT-TRSYDERLETLKHVREAGINVCS-GGIIGLGEAEEDRVGLLHT 256 (386)
Q Consensus 204 ~~-~-~~~~~i~~-~~s~~~~l~~i~~a~~~Gi~v~~-~~i~Glget~ed~~~~l~~ 256 (386)
.. . .......- ...++.+.+..+.+++.++++-+ +-| .+.+|+.+.+..
T Consensus 301 ~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI----~~~~di~kal~~ 353 (490)
T 4avf_A 301 PGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGI----RFSGDLAKAMVA 353 (490)
T ss_dssp CSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCC----CSHHHHHHHHHH
T ss_pred CCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCC----CCHHHHHHHHHc
Confidence 22 1 11111111 22455555555555566766322 222 267888777653
No 138
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=70.17 E-value=36 Score=30.73 Aligned_cols=169 Identities=9% Similarity=-0.015 Sum_probs=86.7
Q ss_pred HHHHHHHHHhccC-eeecccCchHHHHhhhCC-CCCHHHHHHHHHHHHHc-CCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 184 KHQAIELKKAGLT-AYNHNLDTSREFYSKIIT-TRSYDERLETLKHVREA-GINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 184 ~e~l~~Lk~aG~~-~v~i~le~~~~~~~~i~~-~~s~~~~l~~i~~a~~~-Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.++.+.++|+| .|.+++-.. .. +.-.. +.+++...+.++.+++. ++++.+-+- .+-+.+++.++++.+.+.
T Consensus 109 ~~~a~~~~~~g~d~~iein~~~P-~~-~g~~~~g~~~e~~~~iv~~vr~~~~~Pv~vKi~--~~~~~~~~~~~a~~~~~~ 184 (311)
T 1jub_A 109 IAMLKKIQESDFSGITELNLSCP-NV-PGEPQLAYDFEATEKLLKEVFTFFTKPLGVKLP--PYFDLVHFDIMAEILNQF 184 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEESCCC-CS-SSCCCGGGCHHHHHHHHHHHTTTCCSCEEEEEC--CCCSHHHHHHHHHHHTTS
T ss_pred HHHHHHHHhcCCCeEEEEeccCC-CC-CCcccccCCHHHHHHHHHHHHHhcCCCEEEEEC--CCCCHHHHHHHHHHHHHc
Confidence 3445556667777 777665322 11 10000 23677778888888876 565544332 234778888889999888
Q ss_pred CCCCCeEeeeeeee-----c--CCCCCC-------CC-CCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhh
Q 016599 261 PTHPESVPINALLA-----V--KGTPLQ-------DQ-KPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCF 325 (386)
Q Consensus 261 ~~~~~~v~~~~f~P-----~--~gT~l~-------~~-~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l 325 (386)
| ++.+.+..... . ...+.. .. .+......++.+...+...+..+.-+..|-+. ........+
T Consensus 185 G--~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~~~~ipvi~~GGI~-~~~da~~~l 261 (311)
T 1jub_A 185 P--LTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRLKPEIQIIGTGGIE-TGQDAFEHL 261 (311)
T ss_dssp C--CCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTSCTTSEEEEESSCC-SHHHHHHHH
T ss_pred C--CcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhcCCCCCEEEECCCC-CHHHHHHHH
Confidence 7 67776654321 0 011100 00 01111122344554454443222222333232 233345567
Q ss_pred hcCccccccCCccccCCCC-----ChhHHHHHHHHcCCCc
Q 016599 326 LAGANSIFTGEKLLTTPNN-----DFDADQLMFKVLGLTP 360 (386)
Q Consensus 326 ~~Gan~~~~g~~~~t~~~~-----~~~~~~~~i~~~G~~p 360 (386)
.+||+.++.|..++. .++ =.++...++.+.|+.-
T Consensus 262 ~~GAd~V~vg~~~l~-~~p~~~~~i~~~l~~~l~~~g~~s 300 (311)
T 1jub_A 262 LCGATMLQIGTALHK-EGPAIFDRIIKELEEIMNQKGYQS 300 (311)
T ss_dssp HHTCSEEEECHHHHH-HCTHHHHHHHHHHHHHHHHHTCCS
T ss_pred HcCCCEEEEchHHHh-cCcHHHHHHHHHHHHHHHHcCCCC
Confidence 899999977764443 111 1234456677777753
No 139
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=69.90 E-value=43 Score=31.26 Aligned_cols=116 Identities=16% Similarity=0.182 Sum_probs=66.6
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeeecccCch-
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS- 205 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~- 205 (386)
.+.++.+.+.|++.+++..+ .|.+ +.+.+.++.+++. ++++...+ ..+.+.++.+.++|+|.|.++....
T Consensus 107 ~e~a~~l~eaGad~I~ld~a----~G~~---~~~~~~i~~i~~~~~~~Vivg~-v~t~e~A~~l~~aGaD~I~VG~~~Gs 178 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSA----HGHS---LNIIRTLKEIKSKMNIDVIVGN-VVTEEATKELIENGADGIKVGIGPGS 178 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCS----CCSB---HHHHHHHHHHHHHCCCEEEEEE-ECSHHHHHHHHHTTCSEEEECSSCCT
T ss_pred HHHHHHHHHcCcCeEEEeCC----CCCc---HHHHHHHHHHHHhcCCcEEEcc-CCCHHHHHHHHHcCcCEEEEecCCCc
Confidence 34455667789988877432 1322 4567778888754 77765422 2578999999999999999865332
Q ss_pred ---HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecC-CCHHHHHHHHHH
Q 016599 206 ---REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLG-EAEEDRVGLLHT 256 (386)
Q Consensus 206 ---~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glg-et~ed~~~~l~~ 256 (386)
.+...... ..+++.+.+..+.+++.++++-+ .=| .+.+|+.+.+..
T Consensus 179 ~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIA----~GGI~~~~di~kala~ 228 (361)
T 3khj_A 179 ICTTRIVAGVG-VPQITAIEKCSSVASKFGIPIIA----DGGIRYSGDIGKALAV 228 (361)
T ss_dssp TCCHHHHTCBC-CCHHHHHHHHHHHHHHHTCCEEE----ESCCCSHHHHHHHHHH
T ss_pred CCCcccccCCC-CCcHHHHHHHHHHHhhcCCeEEE----ECCCCCHHHHHHHHHc
Confidence 11111111 12344444444444555766322 112 267777776653
No 140
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=69.76 E-value=11 Score=35.31 Aligned_cols=76 Identities=14% Similarity=0.146 Sum_probs=48.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCC-----CCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT-----IGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG- 194 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~-----~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG- 194 (386)
.+.++..+.++.+.+.|+..+.+.++.... .++. ...+.++.+++ .++++..+.|..+.+.++.+.+.|
T Consensus 243 ~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~----~~~~~~~~ir~~~~iPVi~~GgI~s~e~a~~~l~~G~ 318 (363)
T 3l5l_A 243 QTLEESIELARRFKAGGLDLLSVSVGFTIPDTNIPWGPA----FMGPIAERVRREAKLPVTSAWGFGTPQLAEAALQANQ 318 (363)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTT----TTHHHHHHHHHHHTCCEEECSSTTSHHHHHHHHHTTS
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCccccccccCCCcc----hhHHHHHHHHHHcCCcEEEeCCCCCHHHHHHHHHCCC
Confidence 356777888888888888888776543111 1111 12344555553 366776666666788888888887
Q ss_pred cCeeecc
Q 016599 195 LTAYNHN 201 (386)
Q Consensus 195 ~~~v~i~ 201 (386)
+|.|.++
T Consensus 319 aD~V~iG 325 (363)
T 3l5l_A 319 LDLVSVG 325 (363)
T ss_dssp CSEEECC
T ss_pred ccEEEec
Confidence 8888765
No 141
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=69.59 E-value=60 Score=28.77 Aligned_cols=176 Identities=17% Similarity=0.174 Sum_probs=104.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe----cCCCC-HHH---HHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT----LGMLE-KHQ---AIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t----~g~l~-~e~---l~~Lk~a 193 (386)
.+.++|.+.++++.+.|+..||+. |.+.+...+. ++..++.+++- .|..+ +.. .+...+.
T Consensus 56 ~t~~~I~~lc~eA~~~~~aaVCV~---------p~~V~~a~~~---L~gs~v~v~tVigFP~G~~~~~~Kv~Ea~~Ai~~ 123 (260)
T 3r12_A 56 ATPDDIKKLCLEARENRFHGVCVN---------PCYVKLAREE---LEGTDVKVVTVVGFPLGANETRTKAHEAIFAVES 123 (260)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEC---------GGGHHHHHHH---HTTSCCEEEEEESTTTCCSCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCcEEEEC---------HHHHHHHHHH---hcCCCCeEEEEecCCCCCCcHHHHHHHHHHHHHc
Confidence 689999999999999999999883 3344444443 34556665443 23322 222 2333456
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc--CCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA--GINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~--Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
|.+.|.+-+.-. .+ ..++|+.+.+-|..++++ |.. .-+|+=. --|++++....+...+.| +++|..+
T Consensus 124 GAdEIDmViNig-----~l-k~g~~~~v~~eI~~v~~a~~~~~--lKVIlEt~~Lt~eei~~A~~ia~eaG--ADfVKTS 193 (260)
T 3r12_A 124 GADEIDMVINVG-----ML-KAKEWEYVYEDIRSVVESVKGKV--VKVIIETCYLDTEEKIAACVISKLAG--AHFVKTS 193 (260)
T ss_dssp TCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHTTTSE--EEEECCGGGCCHHHHHHHHHHHHHTT--CSEEECC
T ss_pred CCCEEEEEeehh-----hh-ccccHHHHHHHHHHHHHhcCCCc--EEEEEeCCCCCHHHHHHHHHHHHHhC--cCEEEcC
Confidence 999887654332 11 135788888877777766 333 3455433 237889999999999997 7777664
Q ss_pred eeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCcccc
Q 016599 271 ALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 332 (386)
Q Consensus 271 ~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~ 332 (386)
. -+. ....+.++..-+... .-++.-+..++|--++ +.....+.+||+++
T Consensus 194 T-------Gf~-~~GAT~edV~lm~~~---vg~~v~VKaAGGIrt~--~~al~mi~aGA~Ri 242 (260)
T 3r12_A 194 T-------GFG-TGGATAEDVHLMKWI---VGDEMGVKASGGIRTF--EDAVKMIMYGADRI 242 (260)
T ss_dssp C-------SSS-SCCCCHHHHHHHHHH---HCTTSEEEEESSCCSH--HHHHHHHHTTCSEE
T ss_pred C-------CCC-CCCCCHHHHHHHHHH---hCCCceEEEeCCCCCH--HHHHHHHHcCCcee
Confidence 2 111 122455553332222 2344455556553332 33455688999977
No 142
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=69.51 E-value=29 Score=32.62 Aligned_cols=43 Identities=12% Similarity=0.051 Sum_probs=29.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
....+.++....+.+.|+.+..+.++ ++.=-+...+.+...++
T Consensus 280 GGit~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~p 322 (383)
T 3i4k_A 280 GGLLESKKIAAIAEAGGLACHGATSL---EGPIGTAASLQFAASTK 322 (383)
T ss_dssp TSHHHHHHHHHHHHHTTCEEEECCSC---CCHHHHHHHHHHHHHCT
T ss_pred CCHHHHHHHHHHHHHcCCeEEeCCCC---ccHHHHHHHHHHHHcCC
Confidence 46888889999999999987554433 44444556666666663
No 143
>2r8c_A Putative amidohydrolase; unknown source, sargasso SEA, structural genomics, protein structure initiative, PSI; 2.31A {Unidentified} PDB: 3mkv_A*
Probab=69.42 E-value=23 Score=33.34 Aligned_cols=78 Identities=14% Similarity=0.154 Sum_probs=47.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEe--cccCCC---CCC-hhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMG--AAWRDT---IGR-KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~--~g~~~~---~ge-~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~ 195 (386)
-+.+++.+.+++..+.|...+-+. |+.... .+. ....+.+.++++.+++.|+.+.+... ..+.++...++|+
T Consensus 172 ~~~~~~~~~v~~~~~~g~~~ik~~~~G~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~al~~G~ 249 (426)
T 2r8c_A 172 DGVDEVRRAVREELQMGADQIKIMASGGVASPTDPVGVFGYSEDEIRAIVAEAQGRGTYVLAHAY--TPAAIARAVRCGV 249 (426)
T ss_dssp CSHHHHHHHHHHHHHHTCSSEEEECBCCSSSSSCCSSCBCSCHHHHHHHHHHHHHTTCCEEEEEC--SHHHHHHHHHTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEecCCCCCCCCCcccccCCHHHHHHHHHHHHHcCCEEEEEeC--ChHHHHHHHHcCC
Confidence 468899988888877777665443 221111 111 13456788888888888877655543 3445566666777
Q ss_pred Ceeecc
Q 016599 196 TAYNHN 201 (386)
Q Consensus 196 ~~v~i~ 201 (386)
+.+.+.
T Consensus 250 ~~i~H~ 255 (426)
T 2r8c_A 250 RTIEHG 255 (426)
T ss_dssp SEEEEC
T ss_pred CEEecC
Confidence 766654
No 144
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=69.38 E-value=24 Score=30.99 Aligned_cols=75 Identities=12% Similarity=0.162 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
++.+++...++.+.+.|.+-|-..+|.. +.| ..++++.-+-+.+ .-.+.+-.+-|..+.+.+..|.++|.+++-.
T Consensus 154 Lt~eei~~a~~ia~~aGADfVKTSTGf~-~gg--At~~dv~lmr~~v-g~~v~VKasGGIrt~~da~~~i~aGA~riGt 228 (239)
T 3ngj_A 154 LTNEEKVEVCKRCVAAGAEYVKTSTGFG-THG--ATPEDVKLMKDTV-GDKALVKAAGGIRTFDDAMKMINNGASRIGA 228 (239)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSSS-SCC--CCHHHHHHHHHHH-GGGSEEEEESSCCSHHHHHHHHHTTEEEEEE
T ss_pred CCHHHHHHHHHHHHHHCcCEEECCCCCC-CCC--CCHHHHHHHHHhh-CCCceEEEeCCCCCHHHHHHHHHhcccceec
Confidence 5778888888888888988766554432 222 2333333222222 2345566777888888899999999987754
No 145
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=69.29 E-value=25 Score=33.65 Aligned_cols=79 Identities=10% Similarity=0.139 Sum_probs=58.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC----------CC---CChhhHHHHHHHHHHHhh-c--CcEEEEecCCCCHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD----------TI---GRKTNFNQILEYVKDIRD-M--GMEVCCTLGMLEKH 185 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~----------~~---ge~~~~~~l~~~i~~ik~-~--g~~i~~t~g~l~~e 185 (386)
++.+++.+.++.+.+.|++.|.+...... .+ | +...+.-+++++.+++ . .+++....|..+.+
T Consensus 280 ~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG-~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s~e 358 (415)
T 3i65_A 280 LNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSG-AKLKDISTKFICEMYNYTNKQIPIIASGGIFSGL 358 (415)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEE-GGGHHHHHHHHHHHHHHTTTCSCEEECSSCCSHH
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCC-ccchHHHHHHHHHHHHHhCCCCCEEEECCCCCHH
Confidence 56778999999999999999887542210 11 2 2345667788888874 3 47888888998988
Q ss_pred HHHHHHHhccCeeecc
Q 016599 186 QAIELKKAGLTAYNHN 201 (386)
Q Consensus 186 ~l~~Lk~aG~~~v~i~ 201 (386)
.+.++..+|.+.|.++
T Consensus 359 Da~e~l~aGAd~VqIg 374 (415)
T 3i65_A 359 DALEKIEAGASVCQLY 374 (415)
T ss_dssp HHHHHHHHTEEEEEES
T ss_pred HHHHHHHcCCCEEEEc
Confidence 8888888999998875
No 146
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=69.24 E-value=67 Score=29.12 Aligned_cols=170 Identities=14% Similarity=0.111 Sum_probs=100.7
Q ss_pred ecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCC--CCCHHHHHHHHHHHHH-cCCeeeEeEEeecCCCHHHHHHHH
Q 016599 178 TLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIIT--TRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGLL 254 (386)
Q Consensus 178 t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~--~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~l 254 (386)
.++..+.-..+.+.++|++.+.++=-+........-. .-++++.+..++.+.+ ..+++.+++=.|.| +.+++.+++
T Consensus 26 ~~~a~D~~sA~l~e~aGf~ai~vs~~s~a~~~~G~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d~Gyg-~~~~v~~~v 104 (298)
T 3eoo_A 26 VVGAITAYAAKMAEAVGFKAVYLSGGGVAANSLGIPDLGISTMDDVLVDANRITNATNLPLLVDIDTGWG-GAFNIARTI 104 (298)
T ss_dssp EEECSSHHHHHHHHHHTCSCEEECHHHHHHHTTCCCSSSCCCHHHHHHHHHHHHHHCCSCEEEECTTCSS-SHHHHHHHH
T ss_pred EecCCCHHHHHHHHHcCCCEEEECcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhhcCCeEEEECCCCCC-CHHHHHHHH
Confidence 3455678888888899999988752122111111111 2378999988887654 57788888888887 788999999
Q ss_pred HHHhcCCCCCCeEeeeeee-ecC-CCCCCCCCCCCHHHHHHHHHHHHHhC--CCcceee--cCccc-ccCh--hHHHhhh
Q 016599 255 HTLATLPTHPESVPINALL-AVK-GTPLQDQKPVEIWEMIRMIATARIVM--PKAMVRL--SAGRV-RFSM--PEQALCF 325 (386)
Q Consensus 255 ~~l~~l~~~~~~v~~~~f~-P~~-gT~l~~~~~~s~~e~~~~~a~~R~~l--p~~~i~i--~~g~~-~~~~--~~~~~~l 325 (386)
+.+.+.| +.-+.+---. |.. |. +......+.+++...+..++..- ++..|.. .+... .+.. .-...-.
T Consensus 105 ~~l~~aG--aagv~iEDq~~~k~cGh-~~gk~l~~~~e~~~ri~Aa~~A~~~~~~~I~ARTDa~~~~gldeai~Ra~ay~ 181 (298)
T 3eoo_A 105 RSFIKAG--VGAVHLEDQVGQKRCGH-RPGKECVPAGEMVDRIKAAVDARTDETFVIMARTDAAAAEGIDAAIERAIAYV 181 (298)
T ss_dssp HHHHHTT--CSEEEEECBCCCCCTTC-CCCCCBCCHHHHHHHHHHHHHHCSSTTSEEEEEECTHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhC--CeEEEECCCCCCcccCC-CCCCeecCHHHHHHHHHHHHHhccCCCeEEEEeehhhhhcCHHHHHHHHHhhH
Confidence 9888886 6666663221 211 22 23445678888888888777665 3333322 21110 1111 1112234
Q ss_pred hcCccccccCCccccCCCCChhHHHHHHHHcC
Q 016599 326 LAGANSIFTGEKLLTTPNNDFDADQLMFKVLG 357 (386)
Q Consensus 326 ~~Gan~~~~g~~~~t~~~~~~~~~~~~i~~~G 357 (386)
.+||+.+|... . .+.++..+..++..
T Consensus 182 ~AGAD~if~~~-~-----~~~ee~~~~~~~~~ 207 (298)
T 3eoo_A 182 EAGADMIFPEA-M-----KTLDDYRRFKEAVK 207 (298)
T ss_dssp HTTCSEEEECC-C-----CSHHHHHHHHHHHC
T ss_pred hcCCCEEEeCC-C-----CCHHHHHHHHHHcC
Confidence 68999997543 1 24555555555554
No 147
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=69.20 E-value=12 Score=34.37 Aligned_cols=70 Identities=6% Similarity=0.006 Sum_probs=47.3
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCC-CChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHH-hccCeeeccc
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTI-GRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKK-AGLTAYNHNL 202 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~-ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~-aG~~~v~i~l 202 (386)
.+.++.+.+.|++.+.+.++..... ..+..+ +.++.+++ .+++..+.|..+.+.+.++.+ .|+|.|.++=
T Consensus 143 ~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~----~~i~~i~~-~ipVi~~GgI~s~~da~~~l~~~gad~V~iGR 214 (318)
T 1vhn_A 143 EEIYRILVEEGVDEVFIHTRTVVQSFTGRAEW----KALSVLEK-RIPTFVSGDIFTPEDAKRALEESGCDGLLVAR 214 (318)
T ss_dssp HHHHHHHHHTTCCEEEEESSCTTTTTSSCCCG----GGGGGSCC-SSCEEEESSCCSHHHHHHHHHHHCCSEEEESG
T ss_pred HHHHHHHHHhCCCEEEEcCCCccccCCCCcCH----HHHHHHHc-CCeEEEECCcCCHHHHHHHHHcCCCCEEEECH
Confidence 3666777788999888876532211 111122 45666666 788888888878887777776 7999998863
No 148
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=69.14 E-value=35 Score=30.80 Aligned_cols=75 Identities=12% Similarity=0.232 Sum_probs=48.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh---hcCcEEEEecCCCCHHHHHHHHHhccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik---~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
++.+++...++.+.+.|.+-|--.+|.. +.| ...+++ ++++++. ...+.+-..-|..+.+.+..|.++|.+++
T Consensus 185 Lt~eei~~A~~ia~eaGADfVKTSTGf~-~~G--AT~edv-~lmr~~v~~~g~~v~VKAAGGIrt~edAl~mi~aGA~Ri 260 (288)
T 3oa3_A 185 LTADEIIAGCVLSSLAGADYVKTSTGFN-GPG--ASIENV-SLMSAVCDSLQSETRVKASGGIRTIEDCVKMVRAGAERL 260 (288)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEECCCSSS-SCC--CCHHHH-HHHHHHHHHSSSCCEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEcCCCCC-CCC--CCHHHH-HHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHcCCcee
Confidence 5788888888888888987665554432 222 123332 3334332 12456667778888888999999999876
Q ss_pred ec
Q 016599 199 NH 200 (386)
Q Consensus 199 ~i 200 (386)
-.
T Consensus 261 Gt 262 (288)
T 3oa3_A 261 GA 262 (288)
T ss_dssp EE
T ss_pred eh
Confidence 54
No 149
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=68.86 E-value=21 Score=32.28 Aligned_cols=23 Identities=26% Similarity=0.368 Sum_probs=14.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEE
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCM 144 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l 144 (386)
.+++.+++.++.+.+.|+..|.+
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~i~l 169 (293)
T 3ewb_X 147 SDRAFLIEAVQTAIDAGATVINI 169 (293)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEe
Confidence 35566666666666666666655
No 150
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=68.78 E-value=76 Score=29.62 Aligned_cols=137 Identities=15% Similarity=0.206 Sum_probs=76.9
Q ss_pred HHHHHHHHHhccCeeecccCchHHHHhhhCC--CCCHHHHHHHHHHHHHc-CCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 184 KHQAIELKKAGLTAYNHNLDTSREFYSKIIT--TRSYDERLETLKHVREA-GINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~--~~s~~~~l~~i~~a~~~-Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
++..+....+|.|.+.+.+....+. +.+ ..++..+++.++.+++. +++|.+.. +|.|.+.++. ..+.+.
T Consensus 158 e~~~~~ve~~~adal~ihln~~qe~---~~p~Gd~~~~~~~~~I~~l~~~~~~PVivK~-vg~g~s~e~A----~~l~~a 229 (365)
T 3sr7_A 158 QAGLQAVRDLQPLFLQVHINLMQEL---LMPEGEREFRSWKKHLSDYAKKLQLPFILKE-VGFGMDVKTI----QTAIDL 229 (365)
T ss_dssp HHHHHHHHHHCCSCEEEEECHHHHH---TSSSSCCCCHHHHHHHHHHHHHCCSCEEEEE-CSSCCCHHHH----HHHHHH
T ss_pred HHHHHHHHhcCCCEEEEeccccccc---cCCCCCCcHHHHHHHHHHHHHhhCCCEEEEE-CCCCCCHHHH----HHHHHc
Confidence 3456666688999999988876432 333 34677888888888875 77776664 4666776654 444555
Q ss_pred CCCCCeEeeeeeeecCCCCCC--------------CCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhh
Q 016599 261 PTHPESVPINALLAVKGTPLQ--------------DQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFL 326 (386)
Q Consensus 261 ~~~~~~v~~~~f~P~~gT~l~--------------~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~ 326 (386)
| ++.|.+... +||.+. +... +..+.+.. .+.+.++..+-.++| +.-..+ ...++.
T Consensus 230 G--ad~I~V~g~---GGt~~a~ie~~r~~~~~~~~~~g~-pt~~~L~~---v~~~~~~ipvia~GG-I~~g~D-v~KaLa 298 (365)
T 3sr7_A 230 G--VKTVDISGR---GGTSFAYIENRRGGNRSYLNQWGQ-TTAQVLLN---AQPLMDKVEILASGG-IRHPLD-IIKALV 298 (365)
T ss_dssp T--CCEEECCCB---C--------------CGGGTTCSC-BHHHHHHH---HGGGTTTSEEEECSS-CCSHHH-HHHHHH
T ss_pred C--CCEEEEeCC---CCcccchhhccccccccccccccc-cHHHHHHH---HHHhcCCCeEEEeCC-CCCHHH-HHHHHH
Confidence 5 677766432 444331 1122 22232222 233333322323333 322233 467888
Q ss_pred cCccccccCCccc
Q 016599 327 AGANSIFTGEKLL 339 (386)
Q Consensus 327 ~Gan~~~~g~~~~ 339 (386)
.||+.++.|..++
T Consensus 299 lGAdaV~ig~~~l 311 (365)
T 3sr7_A 299 LGAKAVGLSRTML 311 (365)
T ss_dssp HTCSEEEESHHHH
T ss_pred cCCCEEEECHHHH
Confidence 9999997776544
No 151
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=68.76 E-value=39 Score=29.45 Aligned_cols=75 Identities=15% Similarity=0.186 Sum_probs=51.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
+.+++...++.+.+.|.+-|--.+|..++.|. ..+++.-+-+.+. -.+.+-..-|..+.+.+..|.++|.+++-.
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~~~~gA--t~edv~lm~~~v~-~~v~VKaaGGIrt~~~a~~~i~aGa~RiGt 218 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFHPSGGA--SVQAVEIMARTVG-ERLGVKASGGIRTAEQAAAMLDAGATRLGL 218 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCCTTCSC--CHHHHHHHHHHHT-TTSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCCCCCCC--CHHHHHHHHHHhC-CCceEEEeCCCCCHHHHHHHHHhcchhccc
Confidence 78999999999999999877665554323332 2333332222222 345666778888999999999999998764
No 152
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=68.70 E-value=24 Score=33.10 Aligned_cols=100 Identities=8% Similarity=0.074 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-C---chHHHHhhhC------------CCCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-D---TSREFYSKII------------TTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e---~~~~~~~~i~------------~~~s~~ 219 (386)
..++..++++.+.+.++.. .-....-+.+.++++++.- .+++.. | +..+..+.+. +-....
T Consensus 202 ~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit 279 (384)
T 2pgw_A 202 SVHDAINMCRKLEKYDIEFIEQPTVSWSIPAMAHVREKV--GIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQ 279 (384)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHC--SSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred CHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHH
Confidence 3466667777776666542 1111223556666666541 233211 1 1112222121 113578
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.+++.|+.+..+.+ .++.=-+...+.+...++
T Consensus 280 ~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hlaaa~~ 318 (384)
T 2pgw_A 280 PMMKAAAVAEAAGLKICIHSS---FTTGITTCAEHHIGLAIP 318 (384)
T ss_dssp HHHHHHHHHHHTTCCEEECCC---SCCHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHCCCeEeeccC---cCCHHHHHHHHHHHHhCC
Confidence 888999999999998776643 466555666667766653
No 153
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=68.54 E-value=25 Score=30.84 Aligned_cols=67 Identities=15% Similarity=0.130 Sum_probs=44.7
Q ss_pred HHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|+..+++.+....-...... ++.++.+++ .++++....|..+.+.+.++.++|++.+.++
T Consensus 162 ~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~~ipvia~GGI~~~ed~~~~~~~Gadgv~vg 229 (266)
T 2w6r_A 162 VVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAA 229 (266)
T ss_dssp HHHHHHTTCSEEEEEETTTTTTCSCCC----HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHHcCCCEEEEEeecCCCCcCCCC----HHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHcCCHHHHcc
Confidence 345556899888775422110000112 456666664 4778888889988899999999999998875
No 154
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=68.52 E-value=23 Score=33.14 Aligned_cols=84 Identities=10% Similarity=0.047 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHh-ccCeeec-ccCchH---HHHh---------hhCCCCCHHHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKA-GLTAYNH-NLDTSR---EFYS---------KIITTRSYDER 221 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~a-G~~~v~i-~le~~~---~~~~---------~i~~~~s~~~~ 221 (386)
..++..++++.+.+.++.. .-....-+.+.++++++. ++-.+.- ++.+.. +..+ ++.+-....+.
T Consensus 203 ~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 282 (371)
T 2ovl_A 203 TVDGAIRAARALAPFDLHWIEEPTIPDDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTF 282 (371)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHH
Confidence 3466777777777666542 111122345666666654 2211111 121211 1111 11122368889
Q ss_pred HHHHHHHHHcCCeeeEeEE
Q 016599 222 LETLKHVREAGINVCSGGI 240 (386)
Q Consensus 222 l~~i~~a~~~Gi~v~~~~i 240 (386)
++.++.+++.|+.+..+.+
T Consensus 283 ~~i~~~A~~~gi~~~~h~~ 301 (371)
T 2ovl_A 283 RKVAALAEANNMLLTSHGV 301 (371)
T ss_dssp HHHHHHHHHTTCCEEECSC
T ss_pred HHHHHHHHHcCCeEccccH
Confidence 9999999999998776543
No 155
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=68.26 E-value=73 Score=29.20 Aligned_cols=139 Identities=11% Similarity=0.065 Sum_probs=76.7
Q ss_pred HHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe---------cCC-------C-------------C
Q 016599 133 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT---------LGM-------L-------------E 183 (386)
Q Consensus 133 ~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t---------~g~-------l-------------~ 183 (386)
.+++.|+..|-+.- +..+.+.-...+++.++++.+++.|+.+.+. +|. . +
T Consensus 35 ilk~~G~N~VRi~~-w~~P~~g~~~~~~~~~~~~~A~~~GlkV~ld~Hysd~WadPg~Q~~p~~W~~~~~~~~~~~~~yt 113 (332)
T 1hjs_A 35 ILAANGVNTVRQRV-WVNPADGNYNLDYNIAIAKRAKAAGLGVYIDFHYSDTWADPAHQTMPAGWPSDIDNLSWKLYNYT 113 (332)
T ss_dssp HHHHTTCCEEEEEE-CSSCTTCTTSHHHHHHHHHHHHHTTCEEEEEECCSSSCCBTTBCBCCTTCCCSHHHHHHHHHHHH
T ss_pred HHHHCCCCEEEEee-eeCCCCCcCCHHHHHHHHHHHHHCCCEEEEEeccCCCcCCccccCCccccccchHHHHHHHHHHH
Confidence 34568998887631 2222222346789999999999999997654 211 1 1
Q ss_pred HHHHHHHHHhc--cCeeecccCchHHHHhhhCCCCCHHHHHH----HHHHHHHcCCeeeEeEEeec--CCCHHHHHHHHH
Q 016599 184 KHQAIELKKAG--LTAYNHNLDTSREFYSKIITTRSYDERLE----TLKHVREAGINVCSGGIIGL--GEAEEDRVGLLH 255 (386)
Q Consensus 184 ~e~l~~Lk~aG--~~~v~i~le~~~~~~~~i~~~~s~~~~l~----~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~ 255 (386)
.+.++.|++.| ++.+.++-|.....+--.....+++...+ +++.+++....-.+.+++.. +.+.+.....++
T Consensus 114 ~~vl~~l~~~g~~~~~v~vGNEi~~g~~w~~g~~~~~~~~~~l~~~~~~avR~~~~~p~~~v~ih~~~~~~~~~~~~~~d 193 (332)
T 1hjs_A 114 LDAANKLQNAGIQPTIVSIGNEIRAGLLWPTGRTENWANIARLLHSAAWGIKDSSLSPKPKIMIHLDNGWDWGTQNWWYT 193 (332)
T ss_dssp HHHHHHHHHTTCCCSEEEESSSGGGEETBTTEETTCHHHHHHHHHHHHHHHHTSCCSSCCEEEEEESCTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCEEEEeecccccccCcCCCccCHHHHHHHHHHHHHHHHHhccCCCCeEEEEeCCccchHHHHHHHH
Confidence 36778888877 56666777653211000000113443332 34445544310122233333 456666666667
Q ss_pred HHhcCC-C---CCCeEeeeee
Q 016599 256 TLATLP-T---HPESVPINAL 272 (386)
Q Consensus 256 ~l~~l~-~---~~~~v~~~~f 272 (386)
.+.+.+ . ..|.|+++.|
T Consensus 194 ~~~~~g~~~~~~~DvIG~syY 214 (332)
T 1hjs_A 194 NVLKQGTLELSDFDMMGVSFY 214 (332)
T ss_dssp HHHTTSSSCGGGCCEEEEECC
T ss_pred HHHhcCCCCCCCcCEEEEecC
Confidence 777666 4 4788888843
No 156
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=68.01 E-value=19 Score=31.43 Aligned_cols=18 Identities=11% Similarity=-0.093 Sum_probs=15.8
Q ss_pred CCCChhHHHHHHHHcCCC
Q 016599 342 PNNDFDADQLMFKVLGLT 359 (386)
Q Consensus 342 ~~~~~~~~~~~i~~~G~~ 359 (386)
+..+..+..+.+++.||.
T Consensus 212 G~id~~~~~~~l~~~gy~ 229 (262)
T 3p6l_A 212 GILDVKGMLKELKSQNFK 229 (262)
T ss_dssp SSSCHHHHHHHHHHTTCC
T ss_pred CccCHHHHHHHHHHCCCC
Confidence 446899999999999997
No 157
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=67.42 E-value=62 Score=31.09 Aligned_cols=114 Identities=10% Similarity=0.085 Sum_probs=70.3
Q ss_pred CCCHHHHHHHHHHHHH-cCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCC-CCHHHHHHHHHhc-cCe
Q 016599 121 LMTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM-LEKHQAIELKKAG-LTA 197 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~-~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~-l~~e~l~~Lk~aG-~~~ 197 (386)
.++++|.++..+.+.+ .++ +.| ..+.. +..++.+..+-+.+. .++++...-. .+.+.++.+.+.+ ++.
T Consensus 278 ~~t~~elid~y~~lle~ypI--~~I----EDPl~-~dD~eg~a~Lt~~lg--~i~IvGDEl~vTn~~~i~~~Ie~~a~n~ 348 (441)
T 3qtp_A 278 VKDVDGLIAEYVDYGKHYPI--ASI----EDPFA-EDDWAAWNKFTVEHG--NFQIVGDDLLVTNPARVQMAMDKNACNS 348 (441)
T ss_dssp EECHHHHHHHHHHHHHHSCE--EEE----ESCSC-TTCHHHHHHHHHHTT--TSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred ccCHHHHHHHHHHHhhhcce--eee----cCCCC-hHHHHHHHHHHHhcC--CceEEeccccccCHHHHHHHHHcCCCCE
Confidence 4799999998887554 542 223 22222 234555555444432 2665443322 3577777776554 777
Q ss_pred eecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec--CCCHHHHHHHHHHH
Q 016599 198 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLLHTL 257 (386)
Q Consensus 198 v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~~l 257 (386)
+.+.+ ..-.+..+.+++++.++++|+. +|+|+ |||.+.+...+...
T Consensus 349 IlIKv----------nqiGGITEalkaa~lA~~~G~~----vmvsHrsgETeDt~iAdLAVa 396 (441)
T 3qtp_A 349 VLIKV----------NQIGTLTETFKTIKMAQEKGWG----VMASHRSGETEDTFIADLVVG 396 (441)
T ss_dssp EEECG----------GGTCCHHHHHHHHHHHHHTTCE----EEEECCSSCCSCCHHHHHHHH
T ss_pred EEecc----------cccccHHHHHHHHHHHHHcCCe----EEEeCCCCCccHhHHHHHHHH
Confidence 77743 3456788999999999999986 34445 89987776555444
No 158
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=67.42 E-value=23 Score=33.38 Aligned_cols=98 Identities=11% Similarity=0.094 Sum_probs=52.7
Q ss_pred hHHHHHHHHHHHhhcCcEEEEe-cCCCCHHHHHHHHHhccCeeecc----cCchHHHHhhh------------CCCCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEVCCT-LGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKI------------ITTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~----le~~~~~~~~i------------~~~~s~~ 219 (386)
..++..++++.+.+.++...-. ...-+.+.++++++.- .+++. +.+.....+.+ .+-....
T Consensus 206 ~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 283 (391)
T 2qgy_A 206 DLDQTKSFLKEVSSFNPYWIEEPVDGENISLLTEIKNTF--NMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLI 283 (391)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECSSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHH
T ss_pred CHHHHHHHHHHHHhcCCCeEeCCCChhhHHHHHHHHhhC--CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHH
Confidence 4567777787777776652211 1223566677776641 23331 11211111111 1123688
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCC-HHHHHHHHHHHhcC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEA-EEDRVGLLHTLATL 260 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget-~ed~~~~l~~l~~l 260 (386)
+.++.++.+++.|+.+..+.+ ++ .=-+...+.+...+
T Consensus 284 ~~~~i~~~A~~~gi~~~~~~~----~~~~i~~aa~~hlaaa~ 321 (391)
T 2qgy_A 284 DIIEISNEASNNGIFISPHCW----NSMSVSASAMLHVCSSI 321 (391)
T ss_dssp HHHHHHHHHHHTTCEECCBCC----SCTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEeccCC----CCcHHHHHHHHHHHHhC
Confidence 888999999999998666543 22 22344455555555
No 159
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=67.10 E-value=61 Score=28.94 Aligned_cols=120 Identities=9% Similarity=-0.025 Sum_probs=77.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe---------cCCCCHHHHHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT---------LGMLEKHQAIELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t---------~g~l~~e~l~~Lk~ 192 (386)
+++..+.+.++.+.+. ++-+-+.+|.. ..++.+.+.|+..++.++.++.- -| .-++.++.+++
T Consensus 50 lg~~~~~DlLe~ag~y-ID~lKfg~GTs------~l~~~l~ekI~l~~~~gV~v~~GGTlfE~~l~qg-~~~~yl~~~k~ 121 (276)
T 1u83_A 50 YPLQFFKDAIAGASDY-IDFVKFGWGTS------LLTKDLEEKISTLKEHDITFFFGGTLFEKYVSQK-KVNEFHRYCTY 121 (276)
T ss_dssp CCHHHHHHHHHHHGGG-CCEEEECTTGG------GGCTTHHHHHHHHHHTTCEEEECHHHHHHHHHTT-CHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhh-cceEEecCcch------hhhHHHHHHHHHHHHcCCeEeCCcHHHHHHHHcC-cHHHHHHHHHH
Confidence 7888888777765544 66677765532 22333888888888888876532 23 45888999999
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-------CCCHHHHHHHHHHHhcCC
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-------GEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-------get~ed~~~~l~~l~~l~ 261 (386)
.|++.|-++--+. .-+.+++.+.|+.+++. +.|-+.+ |. -.+.+++++.++.-.+.|
T Consensus 122 lGF~~IEISdGti---------~l~~~~~~~lI~~a~~~-f~Vl~Ev--G~K~~~~~~~~~~~~~I~~~~~dLeAG 185 (276)
T 1u83_A 122 FGCEYIEISNGTL---------PMTNKEKAAYIADFSDE-FLVLSEV--GSKDAELASRQSSEEWLEYIVEDMEAG 185 (276)
T ss_dssp TTCSEEEECCSSS---------CCCHHHHHHHHHHHTTT-SEEEEEC--SCCC------CCSTHHHHHHHHHHHHT
T ss_pred cCCCEEEECCCcc---------cCCHHHHHHHHHHHHhh-cEEeeec--cccCccccCCCCHHHHHHHHHHHHHCC
Confidence 9999998865332 23567777888887777 6544322 22 124466666666555554
No 160
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=66.92 E-value=21 Score=33.83 Aligned_cols=127 Identities=10% Similarity=0.101 Sum_probs=63.3
Q ss_pred CHHHHHHHHHHHHHc-CCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~~-G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
++++-++.++.+++. |-. .+.+-. + .....++..++++.+.+.++.. .-....-+.+.+.+|++.- .++
T Consensus 173 ~~~~d~~~v~avR~a~g~~~~l~vDa--N----~~~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iP 244 (393)
T 4dwd_A 173 DIPGDIAKARAVRELLGPDAVIGFDA--N----NGYSVGGAIRVGRALEDLGYSWFEEPVQHYHVGAMGEVAQRL--DIT 244 (393)
T ss_dssp CHHHHHHHHHHHHHHHCTTCCEEEEC--T----TCCCHHHHHHHHHHHHHTTCSEEECCSCTTCHHHHHHHHHHC--SSE
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEC--C----CCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHhhC--CCC
Confidence 566666666665553 432 232211 1 1123466667777776666542 2111122456666666541 233
Q ss_pred ccc-C---chHHHHh-------hh----CCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 200 HNL-D---TSREFYS-------KI----ITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 200 i~l-e---~~~~~~~-------~i----~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.. | +..+..+ .+ .+-....+.++....+.+.|+.+..+.+ + +.=-+...+.+...++
T Consensus 245 Ia~dE~~~~~~~~~~~i~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~-~---~~i~~aa~~hlaaa~p 317 (393)
T 4dwd_A 245 VSAGEQTYTLQALKDLILSGVRMVQPDIVKMGGITGMMQCAALAHAHGVEFVPHQT-Q---PGVGHFANIHVLSTLM 317 (393)
T ss_dssp EEBCTTCCSHHHHHHHHHHTCCEECCCTTTTTHHHHHHHHHHHHHHHTCEECCCCC-C---SSHHHHHHHHHHHTCT
T ss_pred EEecCCcCCHHHHHHHHHcCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCC-C---cHHHHHHHHHHHHhCC
Confidence 322 1 1111111 11 1123477888888899999998776655 2 2223455666666663
No 161
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=66.64 E-value=76 Score=28.83 Aligned_cols=133 Identities=13% Similarity=0.113 Sum_probs=76.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh-hhHHHHHHHHHHHhhcCcEEEEecCC-CCHHHHHHHHHhccCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIRDMGMEVCCTLGM-LEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~-~~~~~l~~~i~~ik~~g~~i~~t~g~-l~~e~l~~Lk~aG~~~v~ 199 (386)
.+.|.+...++.+.+.+.. +.++... +... ...+.+..+++.+.+.+++++++... -+.+.+++-.++|++++-
T Consensus 25 ~n~e~~~Ail~AAee~~sP-vIlq~s~---g~~~y~g~~~~~~~v~~~a~~~VPValHlDHg~~~e~~~~ai~~GFtSVM 100 (305)
T 1rvg_A 25 NNMEFLQAVLEAAEEQRSP-VILALSE---GAMKYGGRALTLMAVELAKEARVPVAVHLDHGSSYESVLRALRAGFTSVM 100 (305)
T ss_dssp CSHHHHHHHHHHHHHTTCC-EEEEEEH---HHHHHHHHHHHHHHHHHHHHCSSCEEEEEEEECSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHHHHHHHHHHhCCC-EEEECCh---hHHhhCCHHHHHHHHHHHHhCCCcEEEECCCCCCHHHHHHHHHcCCCeee
Confidence 4677888888888888764 4454321 0000 12345566666654566776655433 367888888899999887
Q ss_pred cccCch--HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE--eEEeecCCC---------HHHHHHHHHHHhcCCCCCCe
Q 016599 200 HNLDTS--REFYSKIITTRSYDERLETLKHVREAGINVCS--GGIIGLGEA---------EEDRVGLLHTLATLPTHPES 266 (386)
Q Consensus 200 i~le~~--~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~--~~i~Glget---------~ed~~~~l~~l~~l~~~~~~ 266 (386)
++.-.. ++ +.+...+..+.+++.|+.|.. +.+-|..+. .-+-.+..+|+++.+ ++.
T Consensus 101 iDgS~~p~eE---------Ni~~Tk~vv~~ah~~gvsVEaELG~vgg~Ed~~~~~~~~~~yT~Peea~~Fv~~Tg--vD~ 169 (305)
T 1rvg_A 101 IDKSHEDFET---------NVRETRRVVEAAHAVGVTVEAELGRLAGIEEHVAVDEKDALLTNPEEARIFMERTG--ADY 169 (305)
T ss_dssp ECCTTSCHHH---------HHHHHHHHHHHHHHTTCEEEEEESCCCCSCC------CCTTCCCHHHHHHHHHHHC--CSE
T ss_pred eCCCCCCHHH---------HHHHHHHHHHHHHHcCCEEEEEEeeccCccCCccccccccccCCHHHHHHHHHHHC--CCE
Confidence 743322 11 233445677888999987654 444442111 022355566777675 555
Q ss_pred Eee
Q 016599 267 VPI 269 (386)
Q Consensus 267 v~~ 269 (386)
+-+
T Consensus 170 LAv 172 (305)
T 1rvg_A 170 LAV 172 (305)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 162
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=66.28 E-value=23 Score=32.32 Aligned_cols=36 Identities=22% Similarity=0.177 Sum_probs=19.5
Q ss_pred HHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 224 TLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 224 ~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
.++.+.++|+. .+.+.+ .+.+.++.....+++++.+
T Consensus 218 ~l~~l~~~Gld-gIEv~~-~~~~~~~~~~~~~lA~~~g 253 (301)
T 3o0f_A 218 QLDAMIADGLD-GLEVWH-RGNPPEQRERLLTIAARHD 253 (301)
T ss_dssp HHHHHHHHTCC-EEEEES-TTSCHHHHHHHHHHHHHHT
T ss_pred HHHHHHHCCCC-EEEEeC-CCCCHHHHHHHHHHHHHcC
Confidence 34555666662 333333 2446666666666666654
No 163
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=66.28 E-value=60 Score=29.22 Aligned_cols=116 Identities=17% Similarity=0.077 Sum_probs=69.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCC----CCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM----LEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~----l~~e~l~~Lk~aG~~~v 198 (386)
..+.+.+.++.+++.|++.|+|+.= ++ .| ....+.+.++++..+.. .+..+... -..+.++.|.+.|+++|
T Consensus 109 E~~~M~~dI~~~~~~GAdGvVfG~L-~~-dg-~iD~~~~~~Li~~a~~l--~vTFHRAFD~~~d~~~Ale~Li~lGvdrI 183 (287)
T 3iwp_A 109 EIEVMKADIRLAKLYGADGLVFGAL-TE-DG-HIDKELCMSLMAICRPL--PVTFHRAFDMVHDPMAALETLLTLGFERV 183 (287)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEECCB-CT-TS-CBCHHHHHHHHHHHTTS--CEEECGGGGGCSCHHHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeee-CC-CC-CcCHHHHHHHHHHcCCC--cEEEECchhccCCHHHHHHHHHHcCCCEE
Confidence 3566667778888999999988531 11 12 25667888888877654 44333321 24678899999999999
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeecCCCHHHHHHHHHH
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGLLHT 256 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~l~~ 256 (386)
..+=... +..+-++.++.+.+ ++- .+.++.|=|-+.+.+.++++.
T Consensus 184 LTSG~~~-----------~a~~Gl~~Lk~Lv~~a~~--rI~ImaGGGV~~~Ni~~l~~~ 229 (287)
T 3iwp_A 184 LTSGCDS-----------SALEGLPLIKRLIEQAKG--RIVVMPGGGITDRNLQRILEG 229 (287)
T ss_dssp EECTTSS-----------STTTTHHHHHHHHHHHTT--SSEEEECTTCCTTTHHHHHHH
T ss_pred ECCCCCC-----------ChHHhHHHHHHHHHHhCC--CCEEEECCCcCHHHHHHHHHh
Confidence 8632210 11112233333332 332 245677767777777766654
No 164
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=66.25 E-value=57 Score=29.64 Aligned_cols=154 Identities=12% Similarity=0.019 Sum_probs=91.2
Q ss_pred cCCCCHHHHHHHHHhccCeeecccCch-HHHHhhhCC-CCCHHHHHHHHHHHHHc--CCeeeEeEEeecCCCHHHHHHHH
Q 016599 179 LGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIIT-TRSYDERLETLKHVREA--GINVCSGGIIGLGEAEEDRVGLL 254 (386)
Q Consensus 179 ~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~-~~s~~~~l~~i~~a~~~--Gi~v~~~~i~Glget~ed~~~~l 254 (386)
++..+.-..+.+.++|++.+.++=.+. ...+-.=.. .-++++.+...+.+.+. .+++.+++=.|.|. .+++.+++
T Consensus 23 ~~a~D~~sA~l~e~aGf~ai~vsG~~~a~~~~G~pD~~~vt~~em~~~~~~I~~~~~~~PviaD~d~Gyg~-~~~v~~tv 101 (302)
T 3fa4_A 23 PGVYDGLSARVALSAGFDALYMTGAGTAASVHGQADLGICTLNDMRANAEMISNISPSTPVIADADTGYGG-PIMVARTT 101 (302)
T ss_dssp EEECSHHHHHHHHTTTCSCEEECHHHHHHHHHSCCSSSCCCHHHHHHHHHHHHTTSTTSCEEEECTTTTSS-HHHHHHHH
T ss_pred ecCcCHHHHHHHHHcCCCEEEeCcHHHHHHHcCCCCCCcCCHHHHHHHHHHHHhhccCCCEEEECCCCCCC-HHHHHHHH
Confidence 344677788888889999988743333 221211111 23789998888887764 67888888888874 77889999
Q ss_pred HHHhcCCCCCCeEeeeeee-ecCCCCCCCCCCCCHHHHHHHHHHHHHh----CCCcceee--cCccc-ccCh--hHHHhh
Q 016599 255 HTLATLPTHPESVPINALL-AVKGTPLQDQKPVEIWEMIRMIATARIV----MPKAMVRL--SAGRV-RFSM--PEQALC 324 (386)
Q Consensus 255 ~~l~~l~~~~~~v~~~~f~-P~~gT~l~~~~~~s~~e~~~~~a~~R~~----lp~~~i~i--~~g~~-~~~~--~~~~~~ 324 (386)
+.+.+.| +.-+.+---. |.....+...+..+.+++...+..++.. -++..|.. .+-.. .+.. .-....
T Consensus 102 ~~l~~aG--aagv~iEDq~~~Krcgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~ay 179 (302)
T 3fa4_A 102 EQYSRSG--VAAFHIEDQVQTKRCGHLAGKILVDTDTYVTRIRAAVQARQRIGSDIVVIARTDSLQTHGYEESVARLRAA 179 (302)
T ss_dssp HHHHHTT--CCEEEECSBCCC-------CCCBCCHHHHHHHHHHHHHHHHHHTCCCEEEEEECCHHHHCHHHHHHHHHHH
T ss_pred HHHHHcC--CcEEEECCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCEEEEEEecccccCCHHHHHHHHHHH
Confidence 9888886 5666653221 2221122334567888888887766543 35544432 22110 1111 112234
Q ss_pred hhcCccccccC
Q 016599 325 FLAGANSIFTG 335 (386)
Q Consensus 325 l~~Gan~~~~g 335 (386)
..+||+.+|..
T Consensus 180 ~eAGAD~ifi~ 190 (302)
T 3fa4_A 180 RDAGADVGFLE 190 (302)
T ss_dssp HTTTCSEEEET
T ss_pred HHcCCCEEeec
Confidence 56899998654
No 165
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=65.81 E-value=50 Score=28.66 Aligned_cols=70 Identities=13% Similarity=0.142 Sum_probs=52.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c-CcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.+++++.+.+..+.-.|..-|++.+.+. .+ . .++++++++ . .+++.+--|..++|.++++. +|+|.+.
T Consensus 137 ~~~e~~~~~a~~a~~~g~~~VYld~sG~--~~---~----~~~i~~i~~~~~~~Pv~vGGGI~t~e~a~~~~-~gAD~VV 206 (228)
T 3vzx_A 137 LNMDDIVAYARVSELLQLPIFYLEYSGV--LG---D----IEAVKKTKAVLETSTLFYGGGIKDAETAKQYA-EHADVIV 206 (228)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECTTS--CC---C----HHHHHHHHHHCSSSEEEEESSCCSHHHHHHHH-TTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecCCCC--cC---C----HHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHH-hCCCEEE
Confidence 4688998888877777887777765321 12 1 455666664 3 57888889999999999998 7999998
Q ss_pred cc
Q 016599 200 HN 201 (386)
Q Consensus 200 i~ 201 (386)
+|
T Consensus 207 VG 208 (228)
T 3vzx_A 207 VG 208 (228)
T ss_dssp EC
T ss_pred EC
Confidence 85
No 166
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=65.67 E-value=37 Score=30.64 Aligned_cols=79 Identities=14% Similarity=-0.013 Sum_probs=56.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeccc------C-----CC-------C---CChhhHHHHHHHHHHHhh-c--CcEEEE
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAW------R-----DT-------I---GRKTNFNQILEYVKDIRD-M--GMEVCC 177 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~------~-----~~-------~---ge~~~~~~l~~~i~~ik~-~--g~~i~~ 177 (386)
.+.+++.+.++.+.+.|++.+.+.+.. . +. + | +...+..++.++.+++ . .+++..
T Consensus 169 ~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg-~~~~~~~~~~i~~v~~~~~~~ipvi~ 247 (311)
T 1jub_A 169 FDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGG-AYIKPTALANVRAFYTRLKPEIQIIG 247 (311)
T ss_dssp CSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEES-GGGHHHHHHHHHHHHTTSCTTSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCcccc-ccccHHHHHHHHHHHHhcCCCCCEEE
Confidence 477788888888888999888764421 0 00 0 2 2234455778888874 4 688888
Q ss_pred ecCCCCHHHHHHHHHhccCeeecc
Q 016599 178 TLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 178 t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+-|..+.+.+.++..+|++.|.++
T Consensus 248 ~GGI~~~~da~~~l~~GAd~V~vg 271 (311)
T 1jub_A 248 TGGIETGQDAFEHLLCGATMLQIG 271 (311)
T ss_dssp ESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 889889888888778999999875
No 167
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=65.33 E-value=22 Score=32.50 Aligned_cols=113 Identities=18% Similarity=0.230 Sum_probs=60.1
Q ss_pred CCHHHHH----HHHHHHHHcCCcE-EEEeccc-CCCCCChhhHHHHHHHHHHHhhcCcE---EEEecCCCCHHHHHHHHH
Q 016599 122 MTKDAVM----QAAQKAKEAGSTR-FCMGAAW-RDTIGRKTNFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIELKK 192 (386)
Q Consensus 122 ~s~eeI~----~~~~~~~~~G~~~-v~l~~g~-~~~~ge~~~~~~l~~~i~~ik~~g~~---i~~t~g~l~~e~l~~Lk~ 192 (386)
++.+|++ +.++.+++.|..- +.+.... .+..+ ....+++.++++.+.+.|.. +.-|.|..+++.+..+.+
T Consensus 115 ~s~~e~l~~~~~~v~~ak~~G~~v~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~ 193 (307)
T 1ydo_A 115 KSTSESLHILKQVNNDAQKANLTTRAYLSTVFGCPYEK-DVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLE 193 (307)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCEEEEEEECTTCBTTTB-CCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHCCCEEEEEEEEEecCCcCC-CCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHH
Confidence 4556554 4455566778642 1222211 12112 34568899999988887765 455789888888776654
Q ss_pred hc---cCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCC
Q 016599 193 AG---LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGE 245 (386)
Q Consensus 193 aG---~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glge 245 (386)
+= +..+.+++-. ..++.-.+...-.+.++|...--+.+.|+|+
T Consensus 194 ~l~~~~~~~~l~~H~----------Hnd~Gla~AN~laAv~aGa~~vd~tv~GlGe 239 (307)
T 1ydo_A 194 ALLARFPANQIALHF----------HDTRGTALANMVTALQMGITVFDGSAGGLGG 239 (307)
T ss_dssp HHHTTSCGGGEEEEC----------BGGGSCHHHHHHHHHHHTCCEEEEBGGGCCE
T ss_pred HHHHhCCCCeEEEEE----------CCCCchHHHHHHHHHHhCCCEEEEcccccCC
Confidence 31 2112232211 1122222333445566798744445566655
No 168
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=64.27 E-value=20 Score=33.26 Aligned_cols=80 Identities=8% Similarity=0.012 Sum_probs=47.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-cCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-LTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG-~~~v~ 199 (386)
.+.++..+.++.+.+. +.-+.+..|.......+..-....+.++.+|+ .++++..+.+..+.+.++.+.+.| +|.|.
T Consensus 227 ~~~~~~~~~a~~l~~~-vd~i~vs~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~Ae~~l~~G~aD~V~ 305 (343)
T 3kru_A 227 INIDMMVEYINMIKDK-VDLIDVSSGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAVGLITTQELAEEILSNERADLVA 305 (343)
T ss_dssp CCHHHHHHHHHHHTTT-CSEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEESSCCCHHHHHHHHHTTSCSEEE
T ss_pred ccHHHHHHHHHHhhcc-ccEEeccCCceEeeeecccCceeehHHHHHHHhcCcccceeeeeeHHHHHHHHHhchhhHHHH
Confidence 4577888888877777 77777743322110000000113345555553 366776666666788888877777 88887
Q ss_pred ccc
Q 016599 200 HNL 202 (386)
Q Consensus 200 i~l 202 (386)
++=
T Consensus 306 iGR 308 (343)
T 3kru_A 306 LGR 308 (343)
T ss_dssp ESH
T ss_pred HHH
Confidence 753
No 169
>3cyv_A URO-D, UPD, uroporphyrinogen decarboxylase; alpha/beta barrel, cytoplasm, lyase, porphyrin biosynthesis; 2.80A {Shigella flexneri}
Probab=64.15 E-value=54 Score=30.20 Aligned_cols=70 Identities=10% Similarity=0.089 Sum_probs=39.4
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhhH-----HHHHHHHHHHhhc----CcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTNF-----NQILEYVKDIRDM----GMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~~-----~~l~~~i~~ik~~----g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
.++...+.|++.+.+.-.+..... |..+ +++.++++.+++. ++.+....+-. ...+..|.+.|++.+++
T Consensus 192 ~~~~~~~aGad~i~i~d~~~~~ls-p~~f~ef~~p~~k~i~~~i~~~~~~~~~~ii~~~~g~-~~~l~~l~~~g~d~i~~ 269 (354)
T 3cyv_A 192 YLNAQIKAGAQAVMIFDTWGGVLT-GRDYQQFSLYYMHKIVDGLLRENDGRRVPVTLFTKGG-GQWLEAMAETGCDALGL 269 (354)
T ss_dssp HHHHHHHTTCSEEEEECTTGGGSC-HHHHHHHTHHHHHHHHHHSCSEETTEECCEEEECTTT-TTTHHHHHTTSCSEEEC
T ss_pred HHHHHHHhCCCEEEEeCCccccCC-HHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEECCCH-HHHHHHHHhcCCCEEEe
Confidence 334455778887766433322222 3222 4455555666644 25543333322 56788999999999986
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
.
T Consensus 270 d 270 (354)
T 3cyv_A 270 D 270 (354)
T ss_dssp C
T ss_pred C
Confidence 3
No 170
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=64.00 E-value=45 Score=30.78 Aligned_cols=36 Identities=17% Similarity=0.229 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHhhcCcE-E--EEecCCCCHHHHHHHHH
Q 016599 157 NFNQILEYVKDIRDMGME-V--CCTLGMLEKHQAIELKK 192 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i--~~t~g~l~~e~l~~Lk~ 192 (386)
..+++.++++.+.+.|.. + +-|.|..+++.+..+.+
T Consensus 167 ~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~ 205 (337)
T 3ble_A 167 SPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVD 205 (337)
T ss_dssp CHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHH
Confidence 456677777777776654 2 33567776666555533
No 171
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=63.98 E-value=45 Score=28.75 Aligned_cols=75 Identities=16% Similarity=0.233 Sum_probs=49.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
++.+++.+.++.+.+.|++-+...+|. .++| ...+.+..+.+.+ .-.+++..+-|..+.+.+.++.++|.+++..
T Consensus 129 l~~~~~~~~a~~a~eaGad~I~tstg~-~~gg--a~~~~i~~v~~~v-~~~ipVia~GGI~t~~da~~~l~aGA~~iG~ 203 (225)
T 1mzh_A 129 LNEEEIKKAVEICIEAGADFIKTSTGF-APRG--TTLEEVRLIKSSA-KGRIKVKASGGIRDLETAISMIEAGADRIGT 203 (225)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSC-SSSC--CCHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEECCCC-CCCC--CCHHHHHHHHHHh-CCCCcEEEECCCCCHHHHHHHHHhCchHHHH
Confidence 567889999999999999888544332 1222 1233333222222 1257888888888888888888899997654
No 172
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=63.93 E-value=72 Score=31.14 Aligned_cols=124 Identities=17% Similarity=0.227 Sum_probs=74.1
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecccCch
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 205 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~ 205 (386)
.+.++.+.+.|++.+.+.... + ..+.+.+.++.+++. ++.+... +..+.+.++.+.++|+|.+.++.-..
T Consensus 233 ~~~a~~l~~aG~d~I~id~a~----g---~~~~~~~~i~~ir~~~p~~~Vi~g-~v~t~e~a~~l~~aGaD~I~Vg~g~G 304 (496)
T 4fxs_A 233 EERVKALVEAGVDVLLIDSSH----G---HSEGVLQRIRETRAAYPHLEIIGG-NVATAEGARALIEAGVSAVKVGIGPG 304 (496)
T ss_dssp HHHHHHHHHTTCSEEEEECSC----T---TSHHHHHHHHHHHHHCTTCCEEEE-EECSHHHHHHHHHHTCSEEEECSSCC
T ss_pred HHHHHHHHhccCceEEecccc----c---cchHHHHHHHHHHHHCCCceEEEc-ccCcHHHHHHHHHhCCCEEEECCCCC
Confidence 455666777899988876532 1 125677888888754 4555442 24678999999999999998753111
Q ss_pred ----HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE-eEEeecCCCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 206 ----REFYSKIITTRSYDERLETLKHVREAGINVCS-GGIIGLGEAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 206 ----~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~-~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
.+...... ...+..+.+..+.+++.++++-+ +-| -+.+|+.+.+. +| .+.+.+.
T Consensus 305 s~~~tr~~~g~g-~p~~~~i~~v~~~~~~~~iPVIa~GGI----~~~~di~kala----~G--Ad~V~iG 363 (496)
T 4fxs_A 305 SICTTRIVTGVG-VPQITAIADAAGVANEYGIPVIADGGI----RFSGDISKAIA----AG--ASCVMVG 363 (496)
T ss_dssp TTBCHHHHHCCC-CCHHHHHHHHHHHHGGGTCCEEEESCC----CSHHHHHHHHH----TT--CSEEEES
T ss_pred cCcccccccCCC-ccHHHHHHHHHHHhccCCCeEEEeCCC----CCHHHHHHHHH----cC--CCeEEec
Confidence 12222221 22455556666666677776332 122 36777777654 34 5555553
No 173
>1mxs_A KDPG aldolase; 2-keto-3-deoxy-6-phosphogluconate aldolase, sulfate, beta-BA lyase; 2.20A {Pseudomonas putida} SCOP: c.1.10.1
Probab=63.91 E-value=71 Score=27.52 Aligned_cols=155 Identities=10% Similarity=0.030 Sum_probs=86.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c-CcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
+.++.++.++.+.+.|++-+-+.- . .+ .-.+.++.+++ . .+.+-... .++.+.++...++|.+.+..
T Consensus 36 ~~~~~~~~~~al~~gGv~~iel~~--k----~~----~~~~~i~~l~~~~~~~~igagt-vl~~d~~~~A~~aGAd~v~~ 104 (225)
T 1mxs_A 36 REEDILPLADALAAGGIRTLEVTL--R----SQ----HGLKAIQVLREQRPELCVGAGT-VLDRSMFAAVEAAGAQFVVT 104 (225)
T ss_dssp CGGGHHHHHHHHHHTTCCEEEEES--S----ST----HHHHHHHHHHHHCTTSEEEEEC-CCSHHHHHHHHHHTCSSEEC
T ss_pred CHHHHHHHHHHHHHCCCCEEEEec--C----Cc----cHHHHHHHHHHhCcccEEeeCe-EeeHHHHHHHHHCCCCEEEe
Confidence 566778888888999998776642 1 11 22334554442 2 23322222 46889999999999998875
Q ss_pred ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCC
Q 016599 201 NLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPL 280 (386)
Q Consensus 201 ~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l 280 (386)
+-. + .+.++.+++.|+. ++.|. .|.+|+.. ..+.| .+.+.++ |
T Consensus 105 p~~-------------d----~~v~~~~~~~g~~----~i~G~-~t~~e~~~----A~~~G--ad~vk~F-----P---- 147 (225)
T 1mxs_A 105 PGI-------------T----EDILEAGVDSEIP----LLPGI-STPSEIMM----GYALG--YRRFKLF-----P---- 147 (225)
T ss_dssp SSC-------------C----HHHHHHHHHCSSC----EECEE-CSHHHHHH----HHTTT--CCEEEET-----T----
T ss_pred CCC-------------C----HHHHHHHHHhCCC----EEEee-CCHHHHHH----HHHCC--CCEEEEc-----c----
Confidence 421 1 2455667777864 34453 46666543 34565 7777772 2
Q ss_pred CCCCCCCHHHH--HHHHHHHHHhCCCcceeecCcccccChhHHHhhhh-cCccccccCC
Q 016599 281 QDQKPVEIWEM--IRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFL-AGANSIFTGE 336 (386)
Q Consensus 281 ~~~~~~s~~e~--~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~-~Gan~~~~g~ 336 (386)
.... ...+...+..+|+.-+ +..|=++. +.....+. +|++.+. +.
T Consensus 148 -------a~~~~G~~~lk~i~~~~~~ipv-vaiGGI~~--~N~~~~l~~~Ga~~v~-gS 195 (225)
T 1mxs_A 148 -------AEISGGVAAIKAFGGPFGDIRF-CPTGGVNP--ANVRNYMALPNVMCVG-TT 195 (225)
T ss_dssp -------HHHHTHHHHHHHHHTTTTTCEE-EEBSSCCT--TTHHHHHHSTTBCCEE-EC
T ss_pred -------CccccCHHHHHHHHhhCCCCeE-EEECCCCH--HHHHHHHhccCCEEEE-Ec
Confidence 1111 2334445555654222 22222333 22344566 6888886 55
No 174
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=63.70 E-value=94 Score=29.22 Aligned_cols=70 Identities=16% Similarity=0.346 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecccCc
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDT 204 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~ 204 (386)
..+.++.+.+.|++.+.+..+ .+.+ +.+.+.++.+++. ++++.+. +..+.+.++.+.++|+|.|.++...
T Consensus 154 ~~~~a~~~~~~G~d~i~i~~~----~g~~---~~~~e~i~~ir~~~~~~pviv~-~v~~~~~a~~a~~~Gad~I~vg~~~ 225 (404)
T 1eep_A 154 TIERVEELVKAHVDILVIDSA----HGHS---TRIIELIKKIKTKYPNLDLIAG-NIVTKEAALDLISVGADCLKVGIGP 225 (404)
T ss_dssp HHHHHHHHHHTTCSEEEECCS----CCSS---HHHHHHHHHHHHHCTTCEEEEE-EECSHHHHHHHHTTTCSEEEECSSC
T ss_pred HHHHHHHHHHCCCCEEEEeCC----CCCh---HHHHHHHHHHHHHCCCCeEEEc-CCCcHHHHHHHHhcCCCEEEECCCC
Confidence 344556667789888776221 1333 5677788888754 6776542 2356899999999999999886543
No 175
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=63.68 E-value=28 Score=32.37 Aligned_cols=78 Identities=14% Similarity=0.089 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCC--CCCCh--hhHHHHHHHHHHHhh-c-CcEEEEecCCCCHHHHHHHHHhccC
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRD--TIGRK--TNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLT 196 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~--~~ge~--~~~~~l~~~i~~ik~-~-g~~i~~t~g~l~~e~l~~Lk~aG~~ 196 (386)
+.++..+.++.+.+.|++.+.+.+.... ..|.. .....-.+.++.+++ . .+++..+.|..+.+.+.++.+ |+|
T Consensus 142 ~~~~~~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~~iPVianGgI~s~eda~~~l~-GaD 220 (350)
T 3b0p_A 142 TYRGLAQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFPQLTFVTNGGIRSLEEALFHLK-RVD 220 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCTTSEEEEESSCCSHHHHHHHHT-TSS
T ss_pred cHHHHHHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCCCCeEEEECCcCCHHHHHHHHh-CCC
Confidence 4567788888888899998888653211 00100 000012455666663 4 678888888888888888877 999
Q ss_pred eeecc
Q 016599 197 AYNHN 201 (386)
Q Consensus 197 ~v~i~ 201 (386)
.|.++
T Consensus 221 ~V~iG 225 (350)
T 3b0p_A 221 GVMLG 225 (350)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 98875
No 176
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=63.26 E-value=49 Score=28.61 Aligned_cols=184 Identities=15% Similarity=0.153 Sum_probs=91.6
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeccc-CCCCCChh-------------hHHHHHHHHHHHhhc-CcEEEEecCCCC----
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAW-RDTIGRKT-------------NFNQILEYVKDIRDM-GMEVCCTLGMLE---- 183 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~-~~~~ge~~-------------~~~~l~~~i~~ik~~-g~~i~~t~g~l~---- 183 (386)
+.++..+.++.+.+. ++.+.++.-. .|....+. ..+...+.++.+++. .+++.+-.+.-.
T Consensus 17 ~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~~~pv~~~~~~~~~~~~ 95 (248)
T 1geq_A 17 DKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHSSTPIVLMTYYNPIYRA 95 (248)
T ss_dssp CHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTCCCCEEEEECHHHHHHH
T ss_pred CHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhCCCCEEEEeccchhhhc
Confidence 457888888888777 8878776210 11111111 345668888888854 455433221112
Q ss_pred --HHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcC
Q 016599 184 --KHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATL 260 (386)
Q Consensus 184 --~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l 260 (386)
++.++.+.++|++.+.++-... ++..+.++.+++.|+.+.. ++ ..|..+..+.+... .
T Consensus 96 ~~~~~~~~~~~~Gad~v~~~~~~~-------------~~~~~~~~~~~~~g~~~~~----~i~~~t~~e~~~~~~~~--~ 156 (248)
T 1geq_A 96 GVRNFLAEAKASGVDGILVVDLPV-------------FHAKEFTEIAREEGIKTVF----LAAPNTPDERLKVIDDM--T 156 (248)
T ss_dssp CHHHHHHHHHHHTCCEEEETTCCG-------------GGHHHHHHHHHHHTCEEEE----EECTTCCHHHHHHHHHH--C
T ss_pred CHHHHHHHHHHCCCCEEEECCCCh-------------hhHHHHHHHHHHhCCCeEE----EECCCCHHHHHHHHHhc--C
Confidence 5889999999999999864332 1123456667788876433 34 33444443332221 1
Q ss_pred CCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCc
Q 016599 261 PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEK 337 (386)
Q Consensus 261 ~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~ 337 (386)
...+.+ +..+|+.-.. ....+ ..++.+...+... +..+-..+| ++.. +.-...+.+||+.++.|..
T Consensus 157 ---d~~i~~---~~~~G~~g~~-~~~~~-~~~~~i~~l~~~~-~~pi~~~GG-I~~~-e~i~~~~~~Gad~vivGsa 222 (248)
T 1geq_A 157 ---TGFVYL---VSLYGTTGAR-EEIPK-TAYDLLRRAKRIC-RNKVAVGFG-VSKR-EHVVSLLKEGANGVVVGSA 222 (248)
T ss_dssp ---SSEEEE---ECCC--------CCCH-HHHHHHHHHHHHC-SSCEEEESC-CCSH-HHHHHHHHTTCSEEEECHH
T ss_pred ---CCeEEE---EECCccCCCC-CCCCh-hHHHHHHHHHhhc-CCCEEEEee-cCCH-HHHHHHHHcCCCEEEEcHH
Confidence 113333 2334422111 11122 2233444444443 222222222 2221 3234455889999988863
No 177
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=62.95 E-value=43 Score=32.01 Aligned_cols=100 Identities=9% Similarity=0.026 Sum_probs=58.2
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhhh------------CCCCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSKI------------ITTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~i------------~~~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.++++++. ++.+++.. |+ .....+.+ .+-....
T Consensus 241 ~~~eai~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~-~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 319 (428)
T 3bjs_A 241 TMADARRVLPVLAEIQAGWLEEPFACNDFASYREVAKI-TPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGIT 319 (428)
T ss_dssp CHHHHHHHHHHHHHTTCSCEECCSCTTCHHHHHHHTTT-CSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCCccCHHHHHHHHHh-CCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHH
Confidence 456777777777776654 2211122356666666653 11133321 22 22222222 1223688
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.++++|+.+..+ ..++.--+...+++...++
T Consensus 320 ea~~ia~~A~~~gi~~~~~----~~es~i~~~a~~hlaaa~~ 357 (428)
T 3bjs_A 320 EGIRIAAMASAYRIPINAH----SSATGLNHAATIHFLAATE 357 (428)
T ss_dssp HHHHHHHHHHHTTCCBCCB----CCSSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEEec----CCCcHHHHHHHHHHHHhCC
Confidence 9999999999999987666 3467666777777777764
No 178
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=62.14 E-value=84 Score=27.77 Aligned_cols=174 Identities=11% Similarity=0.045 Sum_probs=102.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.++. + ..+.|+..+.+.+......|. +++ ++.++ ...+++..-.-.+++-++.+-+.+|.|.|.+-
T Consensus 65 dp~~iA---~-~~~~GA~aiSVLTd~~~F~Gs---~~~----L~~vr~~v~lPvLrKDFiid~yQI~eAr~~GADaILLI 133 (258)
T 4a29_A 65 DPIEYA---K-FMERYAVGLSITTEEKYFNGS---YET----LRKIASSVSIPILMSDFIVKESQIDDAYNLGADTVLLI 133 (258)
T ss_dssp CHHHHH---H-HHTTTCSEEEEECCSTTTCCC---HHH----HHHHHTTCSSCEEEESCCCSHHHHHHHHHHTCSEEEEE
T ss_pred CHHHHH---H-HHhCCCeEEEEeCCCCCCCCC---HHH----HHHHHHhcCCCEeeccccccHHHHHHHHHcCCCeeehH
Confidence 455554 2 345788888766533323332 233 34445 34677777777889999999999999999875
Q ss_pred cCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCC
Q 016599 202 LDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQ 281 (386)
Q Consensus 202 le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~ 281 (386)
+..+ +.++..+-++.+++.|+.+-+- -.+.+|+...+ +++ ++.++++.-.. .| |
T Consensus 134 ~a~L-----------~~~~l~~l~~~A~~lGl~~LvE-----Vh~~~El~rAl----~~~--a~iIGINNRnL--~t-f- 187 (258)
T 4a29_A 134 VKIL-----------TERELESLLEYARSYGMEPLIL-----INDENDLDIAL----RIG--ARFIGIMSRDF--ET-G- 187 (258)
T ss_dssp GGGS-----------CHHHHHHHHHHHHHTTCCCEEE-----ESSHHHHHHHH----HTT--CSEEEECSBCT--TT-C-
T ss_pred Hhhc-----------CHHHHHHHHHHHHHHhHHHHHh-----cchHHHHHHHh----cCC--CcEEEEeCCCc--cc-c-
Confidence 5444 2334446668889999974221 13666655443 454 77888876432 11 1
Q ss_pred CCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccC
Q 016599 282 DQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTT 341 (386)
Q Consensus 282 ~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~ 341 (386)
..+.+...++ .-.+|+..+.++-+-+. .++.-.....+|++.++.|+.+..+
T Consensus 188 ---~vdl~~t~~L----~~~ip~~~~~VsESGI~-t~~dv~~l~~~G~~a~LVGealmr~ 239 (258)
T 4a29_A 188 ---EINKENQRKL----ISMIPSNVVKVAKLGIS-ERNEIEELRKLGVNAFLISSSLMRN 239 (258)
T ss_dssp ---CBCHHHHHHH----HTTSCTTSEEEEEESSC-CHHHHHHHHHTTCCEEEECHHHHHC
T ss_pred ---ccCHHHHHHH----HhhCCCCCEEEEcCCCC-CHHHHHHHHHCCCCEEEECHHHhCC
Confidence 2344443333 23566655555432222 2232344567899999999876654
No 179
>2d73_A Alpha-glucosidase SUSB; glycoside hydrolase family 97, TIM barrel; 1.60A {Bacteroides thetaiotaomicron vpi-5482} PDB: 2zq0_A* 2jke_A* 2jka_A* 2jkp_A*
Probab=61.87 E-value=51 Score=33.84 Aligned_cols=113 Identities=13% Similarity=0.119 Sum_probs=73.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEE---ecccCCCCC--ChhhH--------HHHHHHHHHHhhcCcEEEE--e-cCC---C
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCM---GAAWRDTIG--RKTNF--------NQILEYVKDIRDMGMEVCC--T-LGM---L 182 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l---~~g~~~~~g--e~~~~--------~~l~~~i~~ik~~g~~i~~--t-~g~---l 182 (386)
.+.+...+.++.+.+.|+..+.+ -.||....| +...| -++.++++..++.|+.+.. + .+. .
T Consensus 368 ~nte~~K~YIDFAA~~G~eyvLveGwD~GW~~~~~~~~~~~fd~~~p~pd~Dl~eL~~YA~sKGV~iilw~~t~~~~~n~ 447 (738)
T 2d73_A 368 ANTANVKRYIDFAAAHGFDAVLVEGWNEGWEDWFGNSKDYVFDFVTPYPDFDVKEIHRYAARKGIKMMMHHETSASVRNY 447 (738)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEECSCBTTGGGCSSSCCSSCCCSSCBCTTCCHHHHHHHHHHTTCEEEEEEECTTBHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEeccCCcccccCccccccccccccCCCCCHHHHHHHHHhCCCEEEEEEcCCCchhhH
Confidence 68999999999999999998887 555532211 10001 1378888888888888533 2 331 1
Q ss_pred ---CHHHHHHHHHhccCeeecccCchHHHHhhhCCC--C----CHHHHHHHHHHHHHcCCeeeEeE
Q 016599 183 ---EKHQAIELKKAGLTAYNHNLDTSREFYSKIITT--R----SYDERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 183 ---~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~--~----s~~~~l~~i~~a~~~Gi~v~~~~ 239 (386)
-++.++.+++.|+..|-++.=+- .|.+. | ...-..++++.|.+.++-|+.+-
T Consensus 448 e~~~d~~f~~~~~~Gv~GVKvdF~g~-----~~~r~~~h~~Q~~v~~Y~~i~~~AA~~~LmVnfHg 508 (738)
T 2d73_A 448 ERHMDKAYQFMADNGYNSVKSGYVGN-----IIPRGEHHYGQWMNNHYLYAVKKAADYKIMVNAHE 508 (738)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEECCSS-----CBSTTCCTTSHHHHHHHHHHHHHHHHTTCEEEETT
T ss_pred HHHHHHHHHHHHHcCCCEEEeCcccc-----CcCCcccccchHHHHHHHHHHHHHHHcCcEEEccC
Confidence 24577888999999998754320 11111 1 24455678888999999887763
No 180
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=61.78 E-value=32 Score=31.20 Aligned_cols=79 Identities=16% Similarity=-0.013 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHHHcC-CcEEEEecccC-----C----------------CCCChhhHHHHHHHHHHHhh-c-CcEEEE
Q 016599 122 MTKDAVMQAAQKAKEAG-STRFCMGAAWR-----D----------------TIGRKTNFNQILEYVKDIRD-M-GMEVCC 177 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G-~~~v~l~~g~~-----~----------------~~ge~~~~~~l~~~i~~ik~-~-g~~i~~ 177 (386)
.+.+++.+.++.+.+.| ++.+.+.+... . ..| +...+..++.++.+++ . .+++..
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg-~~~~p~~~~~i~~v~~~~~~ipvi~ 249 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGG-KYILPTALANVNAFYRRCPDKLVFG 249 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEES-GGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCc-ccccHHHHHHHHHHHHhcCCCCEEE
Confidence 46778888888888899 88776543210 0 001 1223455677777774 4 788888
Q ss_pred ecCCCCHHHHHHHHHhccCeeecc
Q 016599 178 TLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 178 t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+.|..+.+.+.++..+|++.|.++
T Consensus 250 ~GGI~~~~da~~~l~~GAd~V~ig 273 (314)
T 2e6f_A 250 CGGVYSGEDAFLHILAGASMVQVG 273 (314)
T ss_dssp ESSCCSHHHHHHHHHHTCSSEEEC
T ss_pred ECCCCCHHHHHHHHHcCCCEEEEc
Confidence 888888888888778999998875
No 181
>3feq_A Putative amidohydrolase; unknown source, sargasso SEA, structural GEN protein structure initiative, PSI; 2.63A {Unidentified} PDB: 3lwy_A* 3n2c_A*
Probab=61.72 E-value=20 Score=33.46 Aligned_cols=78 Identities=14% Similarity=0.135 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEec--ccCCC---CCC-hhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGA--AWRDT---IGR-KTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~--g~~~~---~ge-~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~ 195 (386)
-+.+++.+.+++..+.|...+.+.. +.... .+. ....+.+.++++.+++.|+.+.+... ..+.++...++|+
T Consensus 169 ~~~~~~~~~v~~~~~~g~~~ik~~~~g~~~~~~~p~~~~~~~~e~l~~~~~~A~~~g~~v~~H~~--~~~~i~~~l~~g~ 246 (423)
T 3feq_A 169 DGVEGVRLAVREEIQKGATQIKIMASGGVASPTDPIANTQYSEDEIRAIVDEAEAANTYVMAHAY--TGRAIARAVRCGV 246 (423)
T ss_dssp CSHHHHHHHHHHHHHTTCSSEEEECBCCSSSSSCCTTSBCSCHHHHHHHHHHHHHTTCCEEEEEE--EHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccCCcCCCCCCcccccCCHHHHHHHHHHHHHCCCeEEEEeC--ChHHHHHHHHcCC
Confidence 4678999999888888876654432 11111 111 13447788888888888877654432 2344555556777
Q ss_pred Ceeecc
Q 016599 196 TAYNHN 201 (386)
Q Consensus 196 ~~v~i~ 201 (386)
+.+.+.
T Consensus 247 ~~i~H~ 252 (423)
T 3feq_A 247 RTIEHG 252 (423)
T ss_dssp CEEEEE
T ss_pred CEEecc
Confidence 766653
No 182
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=61.64 E-value=38 Score=28.75 Aligned_cols=76 Identities=9% Similarity=0.080 Sum_probs=45.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChh-hHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKT-NFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~-~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.+++++. .+.+.|++.+.++..+........ ....-++.++++++ .++++...-|..+.+.+..+.++|++.+.
T Consensus 127 ~t~~e~~----~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~~ipvia~GGI~~~~~~~~~~~~Gad~v~ 202 (223)
T 1y0e_A 127 ATVEEAK----NAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSVDAKVIAEGNVITPDMYKRVMDLGVHCSV 202 (223)
T ss_dssp SSHHHHH----HHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHCCSEEEEESSCCSHHHHHHHHHTTCSEEE
T ss_pred CCHHHHH----HHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhCCCCEEEecCCCCHHHHHHHHHcCCCEEE
Confidence 3555543 356678876644221111000000 01223456666653 47888888887799999999999999998
Q ss_pred cc
Q 016599 200 HN 201 (386)
Q Consensus 200 i~ 201 (386)
++
T Consensus 203 vG 204 (223)
T 1y0e_A 203 VG 204 (223)
T ss_dssp EC
T ss_pred EC
Confidence 86
No 183
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=61.39 E-value=76 Score=28.74 Aligned_cols=125 Identities=14% Similarity=0.137 Sum_probs=68.5
Q ss_pred HHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec---CC-C----CH-----HHHHHHHHhccCee
Q 016599 132 QKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL---GM-L----EK-----HQAIELKKAGLTAY 198 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~---g~-l----~~-----e~l~~Lk~aG~~~v 198 (386)
+.+.+.|++-|.+..-..+...+...++.+.++.+..++.|+++.+.. |. + ++ +.++.+.+.|+|.+
T Consensus 115 e~a~~~GAdaV~vlv~~~~d~~~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~i 194 (304)
T 1to3_A 115 QAVKRDGAKALKLLVLWRSDEDAQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLY 194 (304)
T ss_dssp HHHHHTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEE
T ss_pred HHHHHcCCCEEEEEEEcCCCccHHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEE
Confidence 344567888775432212211123455666677777777888854332 11 1 22 23555556688887
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc-CCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREA-GINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~-Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
-+..-.. +..+++...+.++....+ +++ +++.. |.+.+++.+.+..+.+.+ ..-+.+.
T Consensus 195 Kv~~~~~--------~~g~~~~~~~vv~~~~~~~~~P----~Vv~aGG~~~~~~~~~~~~a~~aG--a~Gv~vG 254 (304)
T 1to3_A 195 KVEMPLY--------GKGARSDLLTASQRLNGHINMP----WVILSSGVDEKLFPRAVRVAMEAG--ASGFLAG 254 (304)
T ss_dssp EECCGGG--------GCSCHHHHHHHHHHHHHTCCSC----EEECCTTSCTTTHHHHHHHHHHTT--CCEEEES
T ss_pred EeCCCcC--------CCCCHHHHHHHHHhccccCCCC----eEEEecCCCHHHHHHHHHHHHHcC--CeEEEEe
Confidence 6643110 112666666666654442 443 23334 667888888888888876 5555443
No 184
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=61.39 E-value=16 Score=31.62 Aligned_cols=70 Identities=14% Similarity=0.195 Sum_probs=45.1
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHh---ccCeeecc
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKA---GLTAYNHN 201 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~a---G~~~v~i~ 201 (386)
.+.++.+.+.|+..+.+.+......+.... ++.++++++ .++++..+-|..+.+.+.++.++ |++.+.++
T Consensus 152 ~e~~~~~~~~G~~~i~~~~~~~~~~~~g~~----~~~~~~l~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~vG 225 (244)
T 2y88_A 152 WDVLERLDSEGCSRFVVTDITKDGTLGGPN----LDLLAGVADRTDAPVIASGGVSSLDDLRAIATLTHRGVEGAIVG 225 (244)
T ss_dssp HHHHHHHHHTTCCCEEEEETTTTTTTSCCC----HHHHHHHHTTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHHHhCCCCEEEEEecCCccccCCCC----HHHHHHHHHhCCCCEEEECCCCCHHHHHHHHhhccCCCCEEEEc
Confidence 444555666799888776532211111123 334444543 46778888888888999999998 99988875
No 185
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=61.34 E-value=25 Score=33.95 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=71.0
Q ss_pred CCCHHHHHHHHHHHH-HcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC-CCCHHHHHHHHHh-ccCe
Q 016599 121 LMTKDAVMQAAQKAK-EAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG-MLEKHQAIELKKA-GLTA 197 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~-~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g-~l~~e~l~~Lk~a-G~~~ 197 (386)
.++++|.++..+.+. +.++ +.| ..+.. +..++.+..+-+.+.. .++++...- ..+.+.+++..+. -++.
T Consensus 280 ~~t~~Elid~y~~lle~ypI--v~I----EDPl~-~dD~eg~a~Lt~~lg~-~iqIvGDDl~vTn~~~i~~~Ie~~a~n~ 351 (452)
T 3otr_A 280 HLTGEKLKEVYEGWLKKYPI--ISV----EDPFD-QDDFASFSAFTKDVGE-KTQVIGDDILVTNILRIEKALKDKACNC 351 (452)
T ss_dssp EECHHHHHHHHHHHHHHSCE--EEE----ECCSC-TTCHHHHHHHHHHHTT-TSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred cccHHHHHHHHHHHHhhhCc--eEE----ecCCC-hhhHHHHHHHHHhhCC-CeEEEeCccccCCHHHHHHHHhcCCCCE
Confidence 379999999987754 4553 223 22222 2345555555444421 266644322 2356667666554 4777
Q ss_pred eecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec--CCCHHHHHHHHHHH
Q 016599 198 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAEEDRVGLLHTL 257 (386)
Q Consensus 198 v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~ed~~~~l~~l 257 (386)
+.+.+ ..-.+..+.+++++.++++|+. +|+|+ |||.+.+...+...
T Consensus 352 IlIKv----------nQIGgITEalka~~lA~~~G~~----vmvshrSGETeD~~iAdLaVg 399 (452)
T 3otr_A 352 LLLKV----------NQIGSVTEAIEACLLAQKSGWG----VQVSHRSGETEDSFIADLVVG 399 (452)
T ss_dssp EEECH----------HHHCCHHHHHHHHHHHHHTTCE----EEEECCSSCCSCCHHHHHHHH
T ss_pred EEeec----------cccccHHHHHHHHHHHHHcCCe----EEEeCCCCCCchhHHHHHHHH
Confidence 77743 2235788999999999999986 45566 89988877665544
No 186
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=61.33 E-value=82 Score=29.41 Aligned_cols=123 Identities=17% Similarity=0.189 Sum_probs=67.7
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecccCch-
Q 016599 129 QAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS- 205 (386)
Q Consensus 129 ~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~- 205 (386)
+.++.+.+.|++-|++.+.. |.+ +.+.+.++.+++. ++.+..-+ ..+.+.++.+.++|+|.|.++....
T Consensus 111 ~~~~~lieaGvd~I~idta~----G~~---~~~~~~I~~ik~~~p~v~Vi~G~-v~t~e~A~~a~~aGAD~I~vG~gpGs 182 (366)
T 4fo4_A 111 ERVKALVEAGVDVLLIDSSH----GHS---EGVLQRIRETRAAYPHLEIIGGN-VATAEGARALIEAGVSAVKVGIGPGS 182 (366)
T ss_dssp HHHHHHHHTTCSEEEEECSC----TTS---HHHHHHHHHHHHHCTTCEEEEEE-ECSHHHHHHHHHHTCSEEEECSSCST
T ss_pred HHHHHHHhCCCCEEEEeCCC----CCC---HHHHHHHHHHHHhcCCCceEeee-eCCHHHHHHHHHcCCCEEEEecCCCC
Confidence 34556677899888774321 222 4677788888754 55543321 3578999999999999999865432
Q ss_pred H-HHHhhhCCC-CCHHHHHHHHHHHHHcCCeeeE-eEEeecCCCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 206 R-EFYSKIITT-RSYDERLETLKHVREAGINVCS-GGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 206 ~-~~~~~i~~~-~s~~~~l~~i~~a~~~Gi~v~~-~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
. .....-..+ ..+..+.+..+.+++.++++-. +-| -+.+++.+.+. +| .+.+.+
T Consensus 183 ~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI----~~~~di~kala----~G--Ad~V~v 239 (366)
T 4fo4_A 183 ICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGI----RFSGDISKAIA----AG--ASCVMV 239 (366)
T ss_dssp TBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCC----CSHHHHHHHHH----TT--CSEEEE
T ss_pred CCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCC----CCHHHHHHHHH----cC--CCEEEE
Confidence 1 111111111 1333334444444556766322 111 25666665553 34 555555
No 187
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=60.94 E-value=43 Score=30.56 Aligned_cols=67 Identities=24% Similarity=0.228 Sum_probs=35.1
Q ss_pred CCCHHHHHHHHHHHHH----cCCcEEEEecccCCCCCChhhHHHHHHHHHHHh---hcCcEEEEecCCCCHHHHHHHHHh
Q 016599 121 LMTKDAVMQAAQKAKE----AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~----~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik---~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
..+.+|..+.++.+++ .|. .+++.+=. +. .....+-+.|++.+ +.|..+..-.|..+.+.++++.++
T Consensus 139 l~~~~e~~~rI~Aa~~A~~~~~~-d~~I~ART-Da----~~~~gldeAi~Ra~ay~eAGAD~ifi~~~~~~~~~~~i~~~ 212 (307)
T 3lye_A 139 VVSRDEYLVRIRAAVATKRRLRS-DFVLIART-DA----LQSLGYEECIERLRAARDEGADVGLLEGFRSKEQAAAAVAA 212 (307)
T ss_dssp BCCHHHHHHHHHHHHHHHHHTTC-CCEEEEEE-CC----HHHHCHHHHHHHHHHHHHTTCSEEEECCCSCHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHHHhcCC-CeEEEEec-hh----hhccCHHHHHHHHHHHHHCCCCEEEecCCCCHHHHHHHHHH
Confidence 4677777666665543 243 34443311 11 11122344444444 557775555566777777777665
No 188
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=60.66 E-value=29 Score=33.16 Aligned_cols=116 Identities=8% Similarity=0.081 Sum_probs=68.8
Q ss_pred CCHHHHHHHHHH-HHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCC-HHHHHHHHHhc-cCee
Q 016599 122 MTKDAVMQAAQK-AKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLE-KHQAIELKKAG-LTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~-~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~-~e~l~~Lk~aG-~~~v 198 (386)
++.++.++..+. +.++++. .+ ..+.. +..++.+..+-+.+. ..++++..--..+ .+.++.+.+.| ++.+
T Consensus 261 ~t~~eai~~~~~ll~~y~i~--~I----EdPl~-~dD~e~~~~L~~~~g-~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i 332 (417)
T 3qn3_A 261 FSSEALIERYVELCAKYPIC--SI----EDGLA-ENDFEGWIKLTEKLG-NKIQLVGDDLFVTNEDILREGIIKKMANAV 332 (417)
T ss_dssp ECHHHHHHHHHHHHHHSCEE--EE----ESSSC-TTCHHHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHHhhccee--EE----ecCCC-cccHHHHHHHHHhhC-CCCceecCCcccCCHHHHHHHHHhCCCCEE
Confidence 578999988887 5666532 22 22222 233444444333321 1366655443444 77777776554 7777
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHH
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTL 257 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l 257 (386)
.+.+ .+-.+.-+.+++++.++.+|+.+-+.... |||.+.+...+...
T Consensus 333 ~iKv----------~qiGGiTea~kia~lA~~~G~~v~vsh~s--gEt~d~~iadlava 379 (417)
T 3qn3_A 333 LIKP----------NQIGTITQTMRTVRLAQRNNYKCVMSHRS--GESEDAFIADFAVA 379 (417)
T ss_dssp EECH----------HHHCSHHHHHHHHHHHHHTTCEEEEECCS--SCCSCCHHHHHHHH
T ss_pred EecC----------CCCCCHHHHHHHHHHHHHcCCeEEEeCCC--CCchHHHHHHHHHH
Confidence 7643 22357888999999999999974332222 78877766555444
No 189
>3a24_A Alpha-galactosidase; glycoside hydrolase family 97, retaining glycosidase; HET: MES; 2.30A {Bacteroides thetaiotaomicron}
Probab=60.63 E-value=37 Score=34.34 Aligned_cols=108 Identities=7% Similarity=0.068 Sum_probs=74.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCC----ChhhHHHHHHHHHHHhhcCcEEEE--ec-CC--CCHHHHHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG----RKTNFNQILEYVKDIRDMGMEVCC--TL-GM--LEKHQAIELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~g----e~~~~~~l~~~i~~ik~~g~~i~~--t~-g~--l~~e~l~~Lk~ 192 (386)
.+.+...+.++.+.+.|+..+.+-.||..... .|..-.++.++++..++.|+.+.+ +. +. --++.++.+++
T Consensus 306 ~n~~~~k~yIDfAa~~G~~yvlvD~gW~~~~~~d~~~~~p~~di~~l~~Ya~~kgV~i~lw~~~~~~~~~~~~~~~~~~~ 385 (641)
T 3a24_A 306 VNNPTYKAYIDFASANGIEYVILDEGWAVNLQADLMQVVKEIDLKELVDYAASKNVGIILWAGYHAFERDMENVCRHYAE 385 (641)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEECTTSBCTTSCCTTCBCTTCCHHHHHHHHHHTTCEEEEEEEHHHHHTSHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccCCCCCccccCCcCCHHHHHHHHHhcCCEEEEEeeCcchHHHHHHHHHHHHH
Confidence 68999999999999999999988777642111 111114688888999988888533 22 21 12568899999
Q ss_pred hccCeeeccc-Cch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEe
Q 016599 193 AGLTAYNHNL-DTS-REFYSKIITTRSYDERLETLKHVREAGINVCSG 238 (386)
Q Consensus 193 aG~~~v~i~l-e~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~ 238 (386)
.|++.|-++. +.. .+ ..+...+.++.|.+.++-|+.+
T Consensus 386 ~Gv~gvK~Df~~~~~Q~---------~v~~y~~i~~~aA~~~l~V~fH 424 (641)
T 3a24_A 386 MGVKGFKVDFMDRDDQE---------MTAFNYRAAEMCAKYKLILDLH 424 (641)
T ss_dssp HTCCEEEEECCCCCSHH---------HHHHHHHHHHHHHHTTCEEEEC
T ss_pred cCCCEEEECCCCCCcHH---------HHHHHHHHHHHHHHcCCEEEcC
Confidence 9999998753 322 11 2344456778888999887765
No 190
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=60.59 E-value=46 Score=29.34 Aligned_cols=103 Identities=16% Similarity=0.202 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhh-HHHHHHHHHHHhhcCcE-EEEecCCC--CHH----HHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTN-FNQILEYVKDIRDMGME-VCCTLGML--EKH----QAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~-~~~l~~~i~~ik~~g~~-i~~t~g~l--~~e----~l~~Lk~a 193 (386)
++.+.+.+.++.+.+.|+. ++.+|-+ -|-.. ...+-+.++.+++.|+. +.++.|.+ +.+ .++.+++.
T Consensus 52 ~~~~~l~eki~l~~~~gV~-v~~GGTl----~E~~~~qg~~~~yl~~~k~lGf~~iEiS~G~i~l~~~~~~~~I~~~~~~ 126 (251)
T 1qwg_A 52 IDRDVVKEKINYYKDWGIK-VYPGGTL----FEYAYSKGKFDEFLNECEKLGFEAVEISDGSSDISLEERNNAIKRAKDN 126 (251)
T ss_dssp SCHHHHHHHHHHHHTTTCE-EEECHHH----HHHHHHTTCHHHHHHHHHHHTCCEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHcCCe-EECCcHH----HHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHC
Confidence 5666777777777888873 4443311 11111 13466677778888888 68888874 333 44555677
Q ss_pred ccCeee-cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCe
Q 016599 194 GLTAYN-HNLDTSREFYSKIITTRSYDERLETLKHVREAGIN 234 (386)
Q Consensus 194 G~~~v~-i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~ 234 (386)
|+..++ ++.+..+. ....+.+++++.++..-++|-.
T Consensus 127 G~~v~~EvG~k~~~~-----~~~~~~~~~I~~~~~~LeAGA~ 163 (251)
T 1qwg_A 127 GFMVLTEVGKKMPDK-----DKQLTIDDRIKLINFDLDAGAD 163 (251)
T ss_dssp TCEEEEEECCSSHHH-----HTTCCHHHHHHHHHHHHHHTCS
T ss_pred CCEEeeeccccCCcc-----cCCCCHHHHHHHHHHHHHCCCc
Confidence 876655 45444311 1345899999999999999975
No 191
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=60.42 E-value=59 Score=28.02 Aligned_cols=75 Identities=15% Similarity=0.249 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
++.+++...++.+.+.|.+-|--.+|.. +.|- ..+++..+.+.+ ...+.+-..-|..+.+.+..|.++|.+++-.
T Consensus 130 l~~e~i~~a~~ia~eaGADfVKTsTGf~-~~ga--t~~dv~~m~~~v-g~~v~VkaaGGirt~~~al~~i~aGa~RiG~ 204 (220)
T 1ub3_A 130 FSPEEIARLAEAAIRGGADFLKTSTGFG-PRGA--SLEDVALLVRVA-QGRAQVKAAGGIRDRETALRMLKAGASRLGT 204 (220)
T ss_dssp SCHHHHHHHHHHHHHHTCSEEECCCSSS-SCCC--CHHHHHHHHHHH-TTSSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCCCC-CCCC--CHHHHHHHHHhh-CCCCeEEEECCCCCHHHHHHHHHCCCcccch
Confidence 4688999999999999998776554432 2221 223332222222 3346677778888888888888999997654
No 192
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=60.40 E-value=31 Score=32.50 Aligned_cols=24 Identities=21% Similarity=0.217 Sum_probs=19.5
Q ss_pred CCHHHHHHHHHHHHHcCCe---eeEeE
Q 016599 216 RSYDERLETLKHVREAGIN---VCSGG 239 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~---v~~~~ 239 (386)
....+.++.++.++++|+. +..+.
T Consensus 300 GGit~~~~i~~~A~~~gi~~~~~~~~~ 326 (392)
T 1tzz_A 300 YGLCEYQRTLEVLKTHGWSPSRCIPHG 326 (392)
T ss_dssp TCHHHHHHHHHHHHHTTCCGGGBCCSC
T ss_pred CCHHHHHHHHHHHHHCCCCCceEeecH
Confidence 3678888999999999998 77763
No 193
>3iar_A Adenosine deaminase; purine metabolism structural genomics, structural genomics consortium, SGC, D mutation, hereditary hemolytic anemia, hydrolase; HET: 3D1; 1.52A {Homo sapiens} SCOP: c.1.9.1 PDB: 2bgn_E* 1w1i_E* 1qxl_A* 1krm_A* 1vfl_A 1ndv_A* 1ndy_A* 1ndz_A* 1o5r_A* 1uml_A* 1v79_A* 1v7a_A* 1ndw_A 1wxy_A* 1wxz_A* 2e1w_A* 2z7g_A* 2ada_A* 3mvi_A 1a4l_A* ...
Probab=60.36 E-value=42 Score=31.39 Aligned_cols=13 Identities=8% Similarity=0.245 Sum_probs=7.7
Q ss_pred HHHHHHHcCCeee
Q 016599 224 TLKHVREAGINVC 236 (386)
Q Consensus 224 ~i~~a~~~Gi~v~ 236 (386)
.++.+++.|+.+.
T Consensus 245 l~~~l~~~~i~le 257 (367)
T 3iar_A 245 LYNRLRQENMHFE 257 (367)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHhCCcEEE
Confidence 4556666776543
No 194
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=60.12 E-value=47 Score=29.90 Aligned_cols=70 Identities=11% Similarity=0.062 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c--CcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M--GMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
..++...+......|..-|.+-++. .+... ++++++++ . .+++.+--|..+.+.++++.++|+|.|.+
T Consensus 185 ~A~~~aYa~~gad~G~~lV~LD~~~-----~~v~~----e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVV 255 (286)
T 3vk5_A 185 TEEIDRYLHVARAFGFHMVYLYSRN-----EHVPP----EVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGF 255 (286)
T ss_dssp SHHHHHHHHHHHHTTCSEEEEECSS-----SCCCH----HHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcCCC-----CcCCH----HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE
Confidence 3344677777778888777775432 22222 44555553 4 57888888999999999999999999998
Q ss_pred cc
Q 016599 201 NL 202 (386)
Q Consensus 201 ~l 202 (386)
+=
T Consensus 256 GS 257 (286)
T 3vk5_A 256 AG 257 (286)
T ss_dssp SG
T ss_pred Cc
Confidence 63
No 195
>4exq_A UPD, URO-D, uroporphyrinogen decarboxylase; ssgcid, NIH, SBRI, heme biosynthesis, structural GENO niaid; 1.65A {Burkholderia thailandensis}
Probab=60.10 E-value=59 Score=30.31 Aligned_cols=68 Identities=16% Similarity=0.219 Sum_probs=38.6
Q ss_pred HHHHHcCCcEEEEecccCCCCCChhh----HHHHHHHHHHHhhc----CcEE-EEecCCCCHHHHHHHHHhccCeeecc
Q 016599 132 QKAKEAGSTRFCMGAAWRDTIGRKTN----FNQILEYVKDIRDM----GMEV-CCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~~~ge~~~----~~~l~~~i~~ik~~----g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+...+.|++.|.+...+......... .+++.++++.+++. ++.+ ....|. ...++.|++.|++.+++.
T Consensus 204 ~~qi~aGad~i~ifDs~~~~Lsp~~f~ef~~Py~k~i~~~l~~~~~g~~~pvi~f~~g~--~~~l~~l~~~g~d~i~~d 280 (368)
T 4exq_A 204 NAQIEAGAQAVMIFDTWGGALADGAYQRFSLDYIRRVVAQLKREHDGARVPAIAFTKGG--GLWLEDLAATGVDAVGLD 280 (368)
T ss_dssp HHHHHHTCSEEEEEETTGGGSCTTHHHHHTHHHHHHHHHTSCCEETTEECCEEEEETTC--GGGHHHHHTSSCSEEECC
T ss_pred HHHHHhCCCEEEEeCCccccCCHHHHHHHhHHHHHHHHHHHHHhcCCCCCcEEEEcCCc--HHHHHHHHHhCCCEEeeC
Confidence 33456798887664333322222222 24455555556643 3553 334443 467888999999988763
No 196
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=59.73 E-value=1.1e+02 Score=28.35 Aligned_cols=120 Identities=13% Similarity=0.051 Sum_probs=72.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCC--C-ChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTI--G-RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~--g-e~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+.+.+++.++.+++.|.+-+-++.--..+. + .....+.+..+.+..++.|+++.++. ++.+.++.+.+. ++.+.
T Consensus 118 s~e~a~~~a~~~k~aGa~~vr~q~fKprTs~~~f~glg~egl~~l~~~~~e~Gl~~~te~--~d~~~~~~l~~~-vd~lk 194 (350)
T 1vr6_A 118 GREMLMETAHFLSELGVKVLRGGAYKPRTSPYSFQGLGEKGLEYLREAADKYGMYVVTEA--LGEDDLPKVAEY-ADIIQ 194 (350)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECBSCCCCCSTTSCCCCTHHHHHHHHHHHHHHTCEEEEEC--SSGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHcCCCeeeeeEEeCCCChHhhcCCCHHHHHHHHHHHHHcCCcEEEEe--CCHHHHHHHHHh-CCEEE
Confidence 789999999999999987654432111110 0 00122333333333447899987764 567888888888 89988
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
|+--.. .++ ..++.+.+.|.+|. +=-|..-|.+|+...++.+..-|
T Consensus 195 IgAr~~----------~n~----~LL~~va~~~kPVi--lk~G~~~tl~ei~~Ave~i~~~G 240 (350)
T 1vr6_A 195 IGARNA----------QNF----RLLSKAGSYNKPVL--LKRGFMNTIEEFLLSAEYIANSG 240 (350)
T ss_dssp ECGGGT----------TCH----HHHHHHHTTCSCEE--EECCTTCCHHHHHHHHHHHHHTT
T ss_pred ECcccc----------cCH----HHHHHHHccCCcEE--EcCCCCCCHHHHHHHHHHHHHCC
Confidence 864332 111 22334444555432 22233348899999999998887
No 197
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=59.69 E-value=43 Score=31.53 Aligned_cols=127 Identities=12% Similarity=0.084 Sum_probs=64.0
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHH-HhccCee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELK-KAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk-~aG~~~v 198 (386)
++++-++.++.+++ .|-+ .+.+-. + .-...++..++++.+.+.++.. .-....-+.+.+++++ +. + .+
T Consensus 177 ~~~~d~~~v~avR~a~g~d~~l~vDa--n----~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~-~-~i 248 (389)
T 3ozy_A 177 APRKDAANLRAMRQRVGADVEILVDA--N----QSLGRHDALAMLRILDEAGCYWFEEPLSIDDIEGHRILRAQG-T-PV 248 (389)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEEC--T----TCCCHHHHHHHHHHHHHTTCSEEESCSCTTCHHHHHHHHTTC-C-SS
T ss_pred CHHHHHHHHHHHHHHcCCCceEEEEC--C----CCcCHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhcC-C-CC
Confidence 45555665655554 2422 232211 1 1123466666777776666542 1111123456666666 43 1 23
Q ss_pred eccc-Cch---HHHHhhh------------CCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 199 NHNL-DTS---REFYSKI------------ITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 199 ~i~l-e~~---~~~~~~i------------~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
++.. |+. .+..+.+ .+-....+.++....++++|+.+..+.+ ++.=-+...+++...++
T Consensus 249 PIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~----~~~i~~aa~~hlaaa~~ 323 (389)
T 3ozy_A 249 RIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALAISASAASAHLAWNPHTF----NDIITVAANLHLVAASP 323 (389)
T ss_dssp EEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHHHHHHHHHTTCEECCCCT----TSHHHHHHHHHHHHHCC
T ss_pred CEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC----CcHHHHHHHHHHHHhCC
Confidence 3322 221 1111111 1223588888999999999998776632 34334455666666664
No 198
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=59.60 E-value=29 Score=32.20 Aligned_cols=94 Identities=10% Similarity=0.094 Sum_probs=49.5
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeecc----cCchHHHHhhh------------CCCCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKI------------ITTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~----le~~~~~~~~i------------~~~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.++++++.- .+++. +.+..+..+.+ .+-....
T Consensus 201 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~ 278 (359)
T 1mdl_A 201 DVPAAIKRSQALQQEGVTWIEEPTLQHDYEGHQRIQSKL--NVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVT 278 (359)
T ss_dssp CHHHHHHHHHHHHHHTCSCEECCSCTTCHHHHHHHHHTC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEECCCChhhHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHH
Confidence 346666777777665554 22111223556666666541 23321 11211111111 1123578
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.++++|+.+..+.+ ++ ..+.+...++
T Consensus 279 ~~~~i~~~A~~~g~~~~~~~~-------~~--a~~~laaa~~ 311 (359)
T 1mdl_A 279 GWIRASALAQQFGIPMSSHLF-------QE--ISAHLLAATP 311 (359)
T ss_dssp HHHHHHHHHHHTTCCBCCBSC-------HH--HHHHHHHTCT
T ss_pred HHHHHHHHHHHcCCeEeeccH-------HH--HHHHHHHhCC
Confidence 888999999999998766632 11 5556666553
No 199
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=59.41 E-value=86 Score=26.97 Aligned_cols=109 Identities=11% Similarity=0.091 Sum_probs=67.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c-CcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.+.++.++.++.+.+.|++-+-+.- .. +. -.+.++.+++ . .+.+-... .++.+.++...++|.|.+.
T Consensus 26 ~~~~~~~~~~~al~~gGv~~iel~~--k~----~~----~~~~i~~l~~~~~~l~vgaGt-vl~~d~~~~A~~aGAd~v~ 94 (224)
T 1vhc_A 26 DNADDILPLADTLAKNGLSVAEITF--RS----EA----AADAIRLLRANRPDFLIAAGT-VLTAEQVVLAKSSGADFVV 94 (224)
T ss_dssp SSGGGHHHHHHHHHHTTCCEEEEET--TS----TT----HHHHHHHHHHHCTTCEEEEES-CCSHHHHHHHHHHTCSEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec--cC----ch----HHHHHHHHHHhCcCcEEeeCc-EeeHHHHHHHHHCCCCEEE
Confidence 4667888889999999998776642 11 11 2334554442 2 22222222 4588999999999999886
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
.+- . + .+.++.+++.|..+ +.|. .|.+++.. +.+.| .+.+.+
T Consensus 95 ~p~-~------------d----~~v~~~ar~~g~~~----i~Gv-~t~~e~~~----A~~~G--ad~vk~ 136 (224)
T 1vhc_A 95 TPG-L------------N----PKIVKLCQDLNFPI----TPGV-NNPMAIEI----ALEMG--ISAVKF 136 (224)
T ss_dssp CSS-C------------C----HHHHHHHHHTTCCE----ECEE-CSHHHHHH----HHHTT--CCEEEE
T ss_pred ECC-C------------C----HHHHHHHHHhCCCE----Eecc-CCHHHHHH----HHHCC--CCEEEE
Confidence 532 1 1 24567778888764 3353 46677544 34565 777777
No 200
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=59.07 E-value=33 Score=33.54 Aligned_cols=70 Identities=17% Similarity=0.156 Sum_probs=48.3
Q ss_pred HHHHHHcCCcEEEEecccCCC--------CCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRDT--------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~--------~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.+.+++|.... .|. ..+..+.++.+.+++.++++...-|..+.+.+.+...+|++.+.++
T Consensus 286 a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~-p~~~~i~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GAd~V~iG 363 (496)
T 4fxs_A 286 ARALIEAGVSAVKVGIGPGSICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMVG 363 (496)
T ss_dssp HHHHHHHTCSEEEECSSCCTTBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhCCCEEEECCCCCcCcccccccCCCc-cHHHHHHHHHHHhccCCCeEEEeCCCCCHHHHHHHHHcCCCeEEec
Confidence 345566788888765322111 011 2445566666667677889988899999999888889999998874
No 201
>3paj_A Nicotinate-nucleotide pyrophosphorylase, carboxyl; TIM barrel, pyridin dicarboxylate, 5-phospho-alpha-D-ribose 1-diphosphate; 2.00A {Vibrio cholerae o1 biovar el tor}
Probab=59.04 E-value=38 Score=31.08 Aligned_cols=58 Identities=14% Similarity=0.079 Sum_probs=37.6
Q ss_pred HHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 133 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 133 ~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.|.+.|.+-. ...+.+.+.++.++. .+.+..+.| ++.+.++.+.+.|+|.+++|
T Consensus 246 eAl~aGaD~I~LDn---------~~~~~l~~av~~l~~-~v~ieaSGG-It~~~I~~~a~tGVD~isvG 303 (320)
T 3paj_A 246 EAISAGADIIMLDN---------FSLEMMREAVKINAG-RAALENSGN-ITLDNLKECAETGVDYISVG 303 (320)
T ss_dssp HHHHTTCSEEEEES---------CCHHHHHHHHHHHTT-SSEEEEESS-CCHHHHHHHHTTTCSEEECT
T ss_pred HHHHcCCCEEEECC---------CCHHHHHHHHHHhCC-CCeEEEECC-CCHHHHHHHHHcCCCEEEEC
Confidence 34445776555532 123556666655542 355656544 78999999999999999875
No 202
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=58.97 E-value=35 Score=31.79 Aligned_cols=99 Identities=13% Similarity=0.139 Sum_probs=54.2
Q ss_pred hHHHHHHHHHHHhhcCcEEEEe-cCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhhhCC------------CCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEVCCT-LGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSKIIT------------TRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~i~~------------~~s~~ 219 (386)
..++..++++.+.+.++...-. ...-+.+.++.+++.- .+++.. |+ ..+..+.+.. -....
T Consensus 200 ~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 277 (370)
T 1nu5_A 200 DEQTASIWIPRLEEAGVELVEQPVPRANFGALRRLTEQN--GVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIA 277 (370)
T ss_dssp CHHHHHHHHHHHHHHTCCEEECCSCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHH
T ss_pred CHHHHHHHHHHHHhcCcceEeCCCCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHH
Confidence 3466677777776666552211 1223566667776541 233311 21 1122222211 13577
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.++.++.++++|+.+..+.+ .|+.=-+...+++...+
T Consensus 278 ~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hlaaa~ 315 (370)
T 1nu5_A 278 NTLKVAAVAEAAGISSYGGTM---LDSTVGTAAALHVYATL 315 (370)
T ss_dssp HHHHHHHHHHHHTCEEEECCS---SCCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCcEEecCC---cchHHHHHHHHHHHhcC
Confidence 888888999999998655432 46655566666776655
No 203
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=58.76 E-value=93 Score=27.16 Aligned_cols=185 Identities=14% Similarity=0.136 Sum_probs=92.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCC-CCCh-------------hhHHHHHHHHHHHhhc-CcEEEEecCCCCHH--
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRK-------------TNFNQILEYVKDIRDM-GMEVCCTLGMLEKH-- 185 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~-~ge~-------------~~~~~l~~~i~~ik~~-g~~i~~t~g~l~~e-- 185 (386)
+.++..+.++.+.+.|++.+.+.....++ ...| ...+..++.++++++. ++++.+. ...+..
T Consensus 30 ~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~~~~Pv~~m-~~~~~~~~ 108 (262)
T 1rd5_A 30 DLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLL-SYYKPIMF 108 (262)
T ss_dssp CHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGGCSSCEEEE-CCSHHHHS
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCCCCEEEE-ecCcHHHH
Confidence 34778888888888999988775321111 0001 1346678888888854 5665432 111111
Q ss_pred -HHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCC
Q 016599 186 -QAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHP 264 (386)
Q Consensus 186 -~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~ 264 (386)
.++.++++|++.+.+.-.. .++..+.++.+++.|+... +.+....+.+.+....... .
T Consensus 109 ~~~~~a~~aGadgv~v~d~~-------------~~~~~~~~~~~~~~g~~~i--~~~a~~t~~e~~~~~~~~~------~ 167 (262)
T 1rd5_A 109 RSLAKMKEAGVHGLIVPDLP-------------YVAAHSLWSEAKNNNLELV--LLTTPAIPEDRMKEITKAS------E 167 (262)
T ss_dssp CCTHHHHHTTCCEEECTTCB-------------TTTHHHHHHHHHHTTCEEC--EEECTTSCHHHHHHHHHHC------C
T ss_pred HHHHHHHHcCCCEEEEcCCC-------------hhhHHHHHHHHHHcCCceE--EEECCCCCHHHHHHHHhcC------C
Confidence 1344889999988873211 1233455667888998732 2222233333333333222 2
Q ss_pred CeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccC-hhHHHhhhhcCccccccCCcc
Q 016599 265 ESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKL 338 (386)
Q Consensus 265 ~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~-~~~~~~~l~~Gan~~~~g~~~ 338 (386)
..+.+. +.+|+.=.... .. ....+.+...|...+ ..+-+.. ++. ++.....+.+||+.++.|..+
T Consensus 168 g~v~~~---s~~G~tG~~~~-~~-~~~~~~i~~v~~~~~-~pI~vgG---GI~~~e~~~~~~~~GAdgvvVGSai 233 (262)
T 1rd5_A 168 GFVYLV---SVNGVTGPRAN-VN-PRVESLIQEVKKVTN-KPVAVGF---GISKPEHVKQIAQWGADGVIIGSAM 233 (262)
T ss_dssp SCEEEE---CSSCCBCTTSC-BC-THHHHHHHHHHHHCS-SCEEEES---CCCSHHHHHHHHHTTCSEEEECHHH
T ss_pred CeEEEe---cCCCCCCCCcC-CC-chHHHHHHHHHhhcC-CeEEEEC---CcCCHHHHHHHHHcCCCEEEEChHH
Confidence 233332 23332101111 11 223344444454432 1122222 333 344455667899999888643
No 204
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=58.70 E-value=19 Score=32.22 Aligned_cols=30 Identities=13% Similarity=0.052 Sum_probs=23.0
Q ss_pred CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 172 GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 172 g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+....|..+.+.++.++++|++.+.++
T Consensus 213 ~~pvVaegGI~t~edv~~l~~~GadgvlVG 242 (272)
T 3qja_A 213 SVIRIAESGVRGTADLLAYAGAGADAVLVG 242 (272)
T ss_dssp TSEEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred cCEEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 456666677777888888888888888775
No 205
>2dsk_A Chitinase; catalytic domain, active domain, crystalline CHIT barrel, hydrolase; 1.50A {Pyrococcus furiosus} PDB: 3a4w_A* 3a4x_A* 3afb_A
Probab=58.70 E-value=35 Score=31.21 Aligned_cols=75 Identities=11% Similarity=0.039 Sum_probs=44.3
Q ss_pred HHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc--CCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCC
Q 016599 187 AIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA--GINVCSGGIIGL-GEAEEDRVGLLHTLATLPTH 263 (386)
Q Consensus 187 l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~--Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~ 263 (386)
...+.++|+|.|-+.+|.. ...+++.++++.+++. ++.+..++-... +-+.+ =...++.++..+..
T Consensus 104 ~~~i~~ygldGIDfDiE~~----------~~~d~~~~aL~~l~~~~p~~~vs~TL~~~p~gl~~~-g~~~l~~a~~~g~~ 172 (311)
T 2dsk_A 104 IKVIDTYNATYLDFDIEAG----------IDADKLADALLIVQRERPWVKFSFTLPSDPGIGLAG-GYGIIETMAKKGVR 172 (311)
T ss_dssp HHHHHHHTCSEEEEEECSC----------CCHHHHHHHHHHHHHHSTTCEEEEEEEEETTTEEST-HHHHHHHHHHHTCC
T ss_pred HHHHHHhCCCcEEEeccCC----------ccHHHHHHHHHHHHhhCCCcEEEEEeccCCCCCCcc-hHHHHHHHHHcCcc
Confidence 3455678999999999885 1224666778877765 667776655543 22221 12344445554433
Q ss_pred CCeEeeeee
Q 016599 264 PESVPINAL 272 (386)
Q Consensus 264 ~~~v~~~~f 272 (386)
++.|.++.+
T Consensus 173 ld~VniM~~ 181 (311)
T 2dsk_A 173 VDRVNPMTM 181 (311)
T ss_dssp CCEEEEECC
T ss_pred ccEEEEEee
Confidence 567776544
No 206
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=58.64 E-value=1.1e+02 Score=27.87 Aligned_cols=158 Identities=11% Similarity=0.105 Sum_probs=84.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecc-cCCCCCChhhHHHHHHHHHHHhh--cCcEEEEecCC-CCHHHHHHHHHhccCe
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRD--MGMEVCCTLGM-LEKHQAIELKKAGLTA 197 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g-~~~~~ge~~~~~~l~~~i~~ik~--~g~~i~~t~g~-l~~e~l~~Lk~aG~~~ 197 (386)
.+.|.+...++.+.+.+.. +.|+.. +...+ ...+.+..+++.+.+ .+++++++... -+.+.+++..++|+++
T Consensus 25 ~n~e~~~avi~AAee~~sP-vIlq~s~g~~~y---~g~~~~~~~v~~aa~~~~~VPValHLDHg~~~e~~~~ai~~GFtS 100 (307)
T 3n9r_A 25 VNFEMLNAIFEAGNEENSP-LFIQASEGAIKY---MGIDMAVGMVKIMCERYPHIPVALHLDHGTTFESCEKAVKAGFTS 100 (307)
T ss_dssp SSHHHHHHHHHHHHHHTCC-EEEEEEHHHHHH---HCHHHHHHHHHHHHHHSTTSCEEEEEEEECSHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHHHHhCCC-EEEEcChhhhhh---CCHHHHHHHHHHHHHhcCCCcEEEECCCCCCHHHHHHHHHhCCCc
Confidence 4667778888887777754 445432 11000 122456666666543 56776655432 3678888888999988
Q ss_pred eecccCch--HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE--eEEeecCCC---------HHHHHHHHHHHhcCCCCC
Q 016599 198 YNHNLDTS--REFYSKIITTRSYDERLETLKHVREAGINVCS--GGIIGLGEA---------EEDRVGLLHTLATLPTHP 264 (386)
Q Consensus 198 v~i~le~~--~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~--~~i~Glget---------~ed~~~~l~~l~~l~~~~ 264 (386)
+-++.-.. ++ +.+...+..+.+++.|+.|.. +.+-|..+. .-+..+..+|+++.+ +
T Consensus 101 VMiDgS~~p~ee---------Ni~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~Tg--v 169 (307)
T 3n9r_A 101 VMIDASHHAFEE---------NLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQ--V 169 (307)
T ss_dssp EEECCTTSCHHH---------HHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHC--C
T ss_pred EEEECCCCCHHH---------HHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHC--C
Confidence 87743222 22 233445778889999987654 444333110 012345556666665 5
Q ss_pred CeEeeeeeeecCCCCCCCCCCCCHHHHHHH
Q 016599 265 ESVPINALLAVKGTPLQDQKPVEIWEMIRM 294 (386)
Q Consensus 265 ~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~ 294 (386)
+.+-+..=+-+...+....+.++.+.+.++
T Consensus 170 D~LAvaiGt~HG~Yk~~~~p~Ld~~~L~~I 199 (307)
T 3n9r_A 170 DYLAPAIGTSHGAFKFKGEPKLDFERLQEV 199 (307)
T ss_dssp SEEEECSSCCSSSBCCSSSCCCCHHHHHHH
T ss_pred CEEEEecCCcccccCCCCCCccCHHHHHHH
Confidence 555443211111111112345666665444
No 207
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=58.58 E-value=88 Score=26.82 Aligned_cols=127 Identities=17% Similarity=0.258 Sum_probs=78.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec----CCCC-H---HHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL----GMLE-K---HQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~----g~l~-~---e~l~~Lk~a 193 (386)
.+.+++.+.++++.+.|+..+++. |...+...+.+. ++.++... |... . ...+...++
T Consensus 17 ~t~~~i~~l~~~a~~~g~~~v~v~---------~~~v~~~~~~l~-----~v~v~~v~~~P~g~~~~~~k~~~~~~A~~~ 82 (225)
T 1mzh_A 17 LSEKEIEEFVLKSEELGIYAVCVN---------PYHVKLASSIAK-----KVKVCCVIGFPLGLNKTSVKVKEAVEAVRD 82 (225)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEC---------GGGHHHHHHHCS-----SSEEEEEESTTTCCSCHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHhCCeEEEEC---------HHHHHHHHHHhc-----CCceeeEecCCCCccchhhhHHHHHHHHHc
Confidence 689999999999999999988764 223333333322 44543222 3221 2 334456678
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
|.+.+.+-+.... + +...++.+.+-++.++++.-++..-+++-. +-+.+++.+..+.+.+.| ++.+..+
T Consensus 83 Gad~Id~viN~g~-----~-~~~~~~~~~~~i~~v~~a~~pv~vKvi~e~~~l~~~~~~~~a~~a~eaG--ad~I~ts 152 (225)
T 1mzh_A 83 GAQELDIVWNLSA-----F-KSEKYDFVVEELKEIFRETPSAVHKVIVETPYLNEEEIKKAVEICIEAG--ADFIKTS 152 (225)
T ss_dssp TCSEEEEECCHHH-----H-HTTCHHHHHHHHHHHHHTCTTSEEEEECCGGGCCHHHHHHHHHHHHHHT--CSEEECC
T ss_pred CCCEEEEEecHHH-----H-hcCChHHHHHHHHHHHHHhcCceEEEEEeCCCCCHHHHHHHHHHHHHhC--CCEEEEC
Confidence 9998884333221 1 234567777777777775324444444433 457888999999999987 7777443
No 208
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=58.55 E-value=95 Score=30.06 Aligned_cols=127 Identities=18% Similarity=0.191 Sum_probs=72.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 125 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
++..+.++.+.+.|++.+.+... .|. ....++.++.+++. ++++..- +..+.+.++.+.++|+|.|.++.
T Consensus 236 ~~~~~~a~~l~~aGvd~v~i~~~----~G~---~~~~~e~i~~i~~~~p~~pvi~g-~~~t~e~a~~l~~~G~d~I~v~~ 307 (494)
T 1vrd_A 236 PETMERVEKLVKAGVDVIVIDTA----HGH---SRRVIETLEMIKADYPDLPVVAG-NVATPEGTEALIKAGADAVKVGV 307 (494)
T ss_dssp TTHHHHHHHHHHTTCSEEEECCS----CCS---SHHHHHHHHHHHHHCTTSCEEEE-EECSHHHHHHHHHTTCSEEEECS
T ss_pred HhHHHHHHHHHHhCCCEEEEEec----CCc---hHHHHHHHHHHHHHCCCceEEeC-CcCCHHHHHHHHHcCCCEEEEcC
Confidence 44566777888899988877432 132 24566777887754 5665443 34678889999999999999866
Q ss_pred Cch--H--HHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 203 DTS--R--EFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 203 e~~--~--~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
... . ...... .........+..+.+.+.++++-+. |=--+.+|+.+.+. +| .+.+.+
T Consensus 308 ~~G~~~~~~~~~~~-g~p~~~~l~~v~~~~~~~~ipvia~---GGI~~~~di~kala----~G--Ad~V~i 368 (494)
T 1vrd_A 308 GPGSICTTRVVAGV-GVPQLTAVMECSEVARKYDVPIIAD---GGIRYSGDIVKALA----AG--AESVMV 368 (494)
T ss_dssp SCSTTCHHHHHHCC-CCCHHHHHHHHHHHHHTTTCCEEEE---SCCCSHHHHHHHHH----TT--CSEEEE
T ss_pred CCCccccccccCCC-CccHHHHHHHHHHHHhhcCCCEEEE---CCcCCHHHHHHHHH----cC--CCEEEE
Confidence 542 1 112221 1112333333333333346653221 11236677776664 44 556665
No 209
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=58.43 E-value=32 Score=31.68 Aligned_cols=65 Identities=18% Similarity=0.159 Sum_probs=44.7
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEe
Q 016599 171 MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGII 241 (386)
Q Consensus 171 ~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~ 241 (386)
.|......+|.. .+.++.|++.|++.|-+.+..-+. ....+++..++.++.++++|+++-.++-+
T Consensus 18 ~g~~~~~~~G~~-~~~~~ilk~~G~n~vRlri~v~P~-----~g~~d~~~~~~~~~~ak~~Gl~v~ld~hy 82 (334)
T 1fob_A 18 EGYSYKNLNGQT-QALETILADAGINSIRQRVWVNPS-----DGSYDLDYNLELAKRVKAAGMSLYLDLHL 82 (334)
T ss_dssp TTCCCBCTTSCB-CCHHHHHHHHTCCEEEEEECSCCT-----TCTTCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred cCCEEECCCCCC-chHHHHHHHcCCCEEEEEEEECCC-----CCccCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 344432224542 466899999999999885531111 11247899999999999999998888755
No 210
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius}
Probab=58.35 E-value=22 Score=33.03 Aligned_cols=25 Identities=24% Similarity=0.323 Sum_probs=21.0
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEe
Q 016599 217 SYDERLETLKHVREAGINVCSGGII 241 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~ 241 (386)
+.+.+++.++.|++.|+.|.....+
T Consensus 95 ~~~~v~~~~~~Ak~~GL~V~l~p~i 119 (343)
T 3civ_A 95 SDDEIASMAELAHALGLKVCLKPTV 119 (343)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEEEEe
Confidence 7889999999999999998765444
No 211
>1qap_A Quinolinic acid phosphoribosyltransferase; glycosyltransferase, NAD biosynthesis; HET: NTM; 2.80A {Salmonella typhimurium} SCOP: c.1.17.1 d.41.2.1
Probab=58.16 E-value=27 Score=31.71 Aligned_cols=42 Identities=14% Similarity=0.151 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 158 FNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 158 ~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.+.+.+.++.+.. .+.+..+.|. +.+.+..+.+.|+|.+.++
T Consensus 239 ~e~l~~~v~~~~~-~~~I~ASGGI-t~~~i~~~a~~GvD~isvG 280 (296)
T 1qap_A 239 TDQMREAVKRVNG-QARLEVSGNV-TAETLREFAETGVDFISVG 280 (296)
T ss_dssp HHHHHHHHHTTCT-TCCEEECCCS-CHHHHHHHHHTTCSEEECS
T ss_pred HHHHHHHHHHhCC-CCeEEEECCC-CHHHHHHHHHcCCCEEEEe
Confidence 3555555554432 3556666665 9999999999999998875
No 212
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=58.02 E-value=25 Score=30.55 Aligned_cols=39 Identities=15% Similarity=0.048 Sum_probs=31.6
Q ss_pred HHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 163 EYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 163 ~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++++.+++.++++...-|..+.+.+.++.++|++.+.++
T Consensus 172 ~li~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (229)
T 3q58_A 172 AMVTQLSHAGCRVIAEGRYNTPALAANAIEHGAWAVTVG 210 (229)
T ss_dssp HHHHHHHTTTCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 455555544778878888889999999999999999987
No 213
>3a5v_A Alpha-galactosidase; beta/alpha barrel, N-glycosylation, hydrolase; HET: MAN NAG BMA 1PG; 2.00A {Umbelopsis vinacea}
Probab=57.99 E-value=26 Score=33.20 Aligned_cols=81 Identities=20% Similarity=0.367 Sum_probs=55.5
Q ss_pred CCHHHHHHHHHHHHH-----cCCcEEEEecccCC----CCCC----hhhHHH-HHHHHHHHhhcCcE--EEEecCC----
Q 016599 122 MTKDAVMQAAQKAKE-----AGSTRFCMGAAWRD----TIGR----KTNFNQ-ILEYVKDIRDMGME--VCCTLGM---- 181 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~-----~G~~~v~l~~g~~~----~~ge----~~~~~~-l~~~i~~ik~~g~~--i~~t~g~---- 181 (386)
.+.+.|++.++.+.+ .|+..|+|-.||.. ..|. +..|+. +..+++.+++.|+. +...+|.
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~r~~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~pg~~tc~ 102 (397)
T 3a5v_A 23 VDEQLILDAAKAIASSGLKDLGYNYVIIDDCWQKNERESSKTLLADPTKFPRGIKPLVDDIHNLGLKAGIYSSAGTLTCG 102 (397)
T ss_dssp CCHHHHHHHHHHHHHHTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCCcccCceEEEECCCcCCCCCCCCCCeEEChhcCCcCHHHHHHHHHHcCCEEEEEecCCCCccC
Confidence 578889999888877 78888877555542 1221 222443 78888888888887 3444442
Q ss_pred -------CCHHHHHHHHHhccCeeeccc
Q 016599 182 -------LEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 182 -------l~~e~l~~Lk~aG~~~v~i~l 202 (386)
.....++.+++.|+|.|-++.
T Consensus 103 ~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 130 (397)
T 3a5v_A 103 GHIASLGYEDIDAKTWAKWGIDYLKYDN 130 (397)
T ss_dssp SCBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHHHHcCCCEEEECC
Confidence 345668889999999988643
No 214
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=57.97 E-value=27 Score=31.32 Aligned_cols=44 Identities=14% Similarity=0.209 Sum_probs=32.7
Q ss_pred hHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 157 NFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.++...++++.+.. ++.+..-.|..+++.++.++++|++.+.++
T Consensus 206 dl~~~~~L~~~ip~-~~~vIaesGI~t~edv~~l~~~Ga~gvLVG 249 (272)
T 3tsm_A 206 NLAVSERLAKMAPS-DRLLVGESGIFTHEDCLRLEKSGIGTFLIG 249 (272)
T ss_dssp CTHHHHHHHHHSCT-TSEEEEESSCCSHHHHHHHHTTTCCEEEEC
T ss_pred ChHHHHHHHHhCCC-CCcEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 34556666655542 456666778889999999999999999885
No 215
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=57.39 E-value=1.1e+02 Score=27.47 Aligned_cols=122 Identities=14% Similarity=0.213 Sum_probs=72.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c---CcEEEEec--CCCCHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M---GMEVCCTL--GMLEKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~---g~~i~~t~--g~l~~e~l~~Lk~aG~ 195 (386)
.+++.+.+.++.+.+.|++.|.+.- +.|- .....+.++++.+++ . .+.++.+| |.-....+..+ ++|+
T Consensus 153 ~~~~~~~~~~~~~~~~Ga~~i~l~D----T~G~-~~P~~~~~lv~~l~~~~~~~~i~~H~Hn~~Gla~An~laA~-~aGa 226 (298)
T 2cw6_A 153 ISPAKVAEVTKKFYSMGCYEISLGD----TIGV-GTPGIMKDMLSAVMQEVPLAALAVHCHDTYGQALANTLMAL-QMGV 226 (298)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEE----TTSC-CCHHHHHHHHHHHHHHSCGGGEEEEEBCTTSCHHHHHHHHH-HTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEecC----CCCC-cCHHHHHHHHHHHHHhCCCCeEEEEECCCCchHHHHHHHHH-HhCC
Confidence 4789999999999999999988842 1221 223455556666553 2 23455544 44344444444 6899
Q ss_pred CeeecccCch-HHHHhhhCCC-CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 196 TAYNHNLDTS-REFYSKIITT-RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 196 ~~v~i~le~~-~~~~~~i~~~-~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.+..++-++ +=-|..-+.+ -..++.+..++ ..|+.. |-+.+.+.+..+++.+.
T Consensus 227 ~~vd~tv~GlG~cp~a~g~aGN~~~E~lv~~l~---~~g~~~--------~idl~~l~~~~~~~~~~ 282 (298)
T 2cw6_A 227 SVVDSSVAGLGGCPYAQGASGNLATEDLVYMLE---GLGIHT--------GVNLQKLLEAGNFICQA 282 (298)
T ss_dssp CEEEEBTTSCCCCTTSCSSCCBCBHHHHHHHHH---HHTCBC--------CCCHHHHHHHHHHHHHH
T ss_pred CEEEeecccccCCCCCCCCcCChhHHHHHHHHH---hcCCCC--------CcCHHHHHHHHHHHHHH
Confidence 9998877765 3111111112 25676666654 456542 44677777777777654
No 216
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=57.36 E-value=25 Score=31.99 Aligned_cols=58 Identities=7% Similarity=0.094 Sum_probs=38.4
Q ss_pred HHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 133 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 133 ~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.|.+.|.+-. ...+.+.+.++.++. .+.+..+ |-++.+.++.+.+.|+|.|+++
T Consensus 222 eAl~aGaDiImLDn---------~s~~~l~~av~~~~~-~v~leaS-GGIt~~~i~~~A~tGVD~IsvG 279 (300)
T 3l0g_A 222 ESLSNNVDMILLDN---------MSISEIKKAVDIVNG-KSVLEVS-GCVNIRNVRNIALTGVDYISIG 279 (300)
T ss_dssp HHHHTTCSEEEEES---------CCHHHHHHHHHHHTT-SSEEEEE-SSCCTTTHHHHHTTTCSEEECG
T ss_pred HHHHcCCCEEEECC---------CCHHHHHHHHHhhcC-ceEEEEE-CCCCHHHHHHHHHcCCCEEEeC
Confidence 44446776554421 233666667766653 3455555 4468899999999999999975
No 217
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=57.31 E-value=35 Score=31.88 Aligned_cols=80 Identities=9% Similarity=-0.017 Sum_probs=44.6
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeec----ccCc-hHHHHhhhC------------CCCCH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNH----NLDT-SREFYSKII------------TTRSY 218 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i----~le~-~~~~~~~i~------------~~~s~ 218 (386)
..++..++++.+.+.++.. .-....-+.+.++.|++.- .+++ ++.+ ..+..+.+. +-...
T Consensus 212 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 289 (382)
T 1rvk_A 212 SRTDALALGRGLEKLGFDWIEEPMDEQSLSSYKWLSDNL--DIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVGGI 289 (382)
T ss_dssp CHHHHHHHHHHHHTTTCSEEECCSCTTCHHHHHHHHHHC--SSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHTSH
T ss_pred CHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHhhC--CCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcCCH
Confidence 3566777777777666542 1111223566677776641 2332 2223 211222111 11357
Q ss_pred HHHHHHHHHHHHcCCeeeEe
Q 016599 219 DERLETLKHVREAGINVCSG 238 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~ 238 (386)
.+.++.++.++++|+.+..+
T Consensus 290 t~~~~i~~~A~~~g~~~~~~ 309 (382)
T 1rvk_A 290 TPALKTMHLAEAFGMECEVH 309 (382)
T ss_dssp HHHHHHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHHHHcCCeEeec
Confidence 78889999999999987777
No 218
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=57.17 E-value=32 Score=30.94 Aligned_cols=75 Identities=15% Similarity=0.205 Sum_probs=49.9
Q ss_pred HHHHHHHHHHcCCcEEEEeccc-----CC-C-----------CCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHH
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAW-----RD-T-----------IGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAI 188 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~-----~~-~-----------~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~ 188 (386)
+.+.++.+.+.|++.+.+++.. +. + ...+......++.++.+++ ..+++..+-|..+.+.+.
T Consensus 178 ~~~~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~~d~~ 257 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANAQDVL 257 (311)
T ss_dssp SHHHHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCHHHHH
Confidence 3444566677899988875411 00 0 0012233345677877774 477888888888899999
Q ss_pred HHHHhccCeeecc
Q 016599 189 ELKKAGLTAYNHN 201 (386)
Q Consensus 189 ~Lk~aG~~~v~i~ 201 (386)
++.++|++.|.++
T Consensus 258 ~~l~~GAd~V~vg 270 (311)
T 1ep3_A 258 EMYMAGASAVAVG 270 (311)
T ss_dssp HHHHHTCSEEEEC
T ss_pred HHHHcCCCEEEEC
Confidence 9888999999875
No 219
>1h7n_A 5-aminolaevulinic acid dehydratase; lyase, aldolase, TIM barrel, tetrapyrrole synthesis; HET: SHF; 1.6A {Saccharomyces cerevisiae} SCOP: c.1.10.3 PDB: 1h7p_A* 1h7r_A* 1ohl_A* 1qml_A 1qnv_A 1w31_A* 1h7o_A* 1eb3_A* 1gjp_A* 1ylv_A* 1aw5_A
Probab=57.15 E-value=48 Score=30.42 Aligned_cols=50 Identities=12% Similarity=0.129 Sum_probs=33.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccC-----CCCCChh--hHHHHHHHHHHHhhc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWR-----DTIGRKT--NFNQILEYVKDIRDM 171 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~-----~~~ge~~--~~~~l~~~i~~ik~~ 171 (386)
++.+.++++++++.+.|++.|.+.|... +..|... .-.-+...|+.+|+.
T Consensus 66 ~sid~l~~~~~~~~~lGi~~v~LFgv~~~~~~KD~~gs~A~~~~g~v~rair~iK~~ 122 (342)
T 1h7n_A 66 IGVNRLKDYLKPLVAKGLRSVILFGVPLIPGTKDPVGTAADDPAGPVIQGIKFIREY 122 (342)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEEEEECCSTTCCBTTCGGGGCTTSHHHHHHHHHHHH
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEecccCccCCCCccccccCCCCChHHHHHHHHHHH
Confidence 7999999999999999999998866421 1112111 112366777777753
No 220
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=57.03 E-value=1e+02 Score=27.12 Aligned_cols=149 Identities=14% Similarity=0.188 Sum_probs=86.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEec------CC--CCHH-HHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTL------GM--LEKH-QAIEL 190 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~------g~--l~~e-~l~~L 190 (386)
.+.+++++.++.+...|++-|-+=-.. +.+....+++.+.+..+++. ++++..|. |. .+++ .+..+
T Consensus 29 ~t~~e~l~~a~~~~~~~aD~vElR~D~---l~~~~~~~~v~~~l~~lr~~~~~lPiI~T~Rt~~EGG~~~~~~~~~~~ll 105 (258)
T 4h3d_A 29 KNKKDIIKEAKELKDACLDIIEWRVDF---FENVENIKEVKEVLYELRSYIHDIPLLFTFRSVVEGGEKLISRDYYTTLN 105 (258)
T ss_dssp SSHHHHHHHHHHHTTSSCSEEEEEGGG---CTTTTCHHHHHHHHHHHHHHCTTSCEEEECCCGGGTCSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeecc---ccccCCHHHHHHHHHHHHHhcCCCCEEEEEechhhCCCCCCCHHHHHHHH
Confidence 478999999999888888777653221 12234567888888888753 56765552 32 3443 34433
Q ss_pred HH---hc-cCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeee-EeEEeecCCCHHHHHHHHHHHhcCCCCCC
Q 016599 191 KK---AG-LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVC-SGGIIGLGEAEEDRVGLLHTLATLPTHPE 265 (386)
Q Consensus 191 k~---aG-~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~-~~~i~Glget~ed~~~~l~~l~~l~~~~~ 265 (386)
+. .| ++.+-+-+...++ ..-+.++.+++.|.++- +.--+----+.+++...+..+.++| ++
T Consensus 106 ~~~~~~~~~d~iDvEl~~~~~------------~~~~l~~~a~~~~~kiI~S~Hdf~~TP~~~el~~~~~~~~~~g--aD 171 (258)
T 4h3d_A 106 KEISNTGLVDLIDVELFMGDE------------VIDEVVNFAHKKEVKVIISNHDFNKTPKKEEIVSRLCRMQELG--AD 171 (258)
T ss_dssp HHHHHTTCCSEEEEEGGGCHH------------HHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTT--CS
T ss_pred HHHHhcCCchhhHHhhhccHH------------HHHHHHHHHHhCCCEEEEEEecCCCCCCHHHHHHHHHHHHHhC--CC
Confidence 33 34 6666654433222 12234556778887632 2211111124588999999999986 56
Q ss_pred eEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHH
Q 016599 266 SVPINALLAVKGTPLQDQKPVEIWEMIRMIATAR 299 (386)
Q Consensus 266 ~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R 299 (386)
.+.+-. +| -+.++.++++...+
T Consensus 172 IvKia~-~~-----------~~~~D~l~Ll~~~~ 193 (258)
T 4h3d_A 172 LPKIAV-MP-----------QNEKDVLVLLEATN 193 (258)
T ss_dssp EEEEEE-CC-----------SSHHHHHHHHHHHH
T ss_pred EEEEEE-cc-----------CCHHHHHHHHHHHH
Confidence 555432 12 24566666665543
No 221
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=56.92 E-value=20 Score=33.94 Aligned_cols=99 Identities=14% Similarity=0.147 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhhh------------CCCCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSKI------------ITTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~i------------~~~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.++++++.- .+++.. |+ .....+.+ .+-....
T Consensus 201 ~~~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 278 (397)
T 2qde_A 201 TYDQALTTIRALEKYNLSKIEQPLPAWDLDGMARLRGKV--ATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLL 278 (397)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTTC--SSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred CHHHHHHHHHHHHhCCCCEEECCCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHH
Confidence 456677777777766654 22111223456666666531 233321 11 11111111 1123577
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.++.++.+++.|+.+..+.++ ++.=-+...+.+...+
T Consensus 279 ~~~~i~~~A~~~g~~~~~~~~~---es~ig~aa~~hlaa~~ 316 (397)
T 2qde_A 279 KAQRWLTLARLANLPVICGCMV---GSGLEASPAAHLLAAN 316 (397)
T ss_dssp HHHHHHHHHHHHTCCEEECCCS---CCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCeEEEecCc---ccHHHHHHHHHHHHhC
Confidence 8888889999999987666443 3433444455555544
No 222
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=56.87 E-value=25 Score=31.74 Aligned_cols=43 Identities=14% Similarity=0.057 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 158 FNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 158 ~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.+.+.+.++.++.. ++.+.++-| ++.+.++.+.+.|+|.+.+|
T Consensus 225 ~~~~~~~v~~l~~~~~~v~ieaSGG-It~~~i~~~a~tGVD~isvG 269 (284)
T 1qpo_A 225 VWQTQTAVQRRDSRAPTVMLESSGG-LSLQTAATYAETGVDYLAVG 269 (284)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEESS-CCTTTHHHHHHTTCSEEECG
T ss_pred HHHHHHHHHHhhccCCCeEEEEECC-CCHHHHHHHHhcCCCEEEEC
Confidence 35666677766653 455666644 68999999999999999875
No 223
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=56.86 E-value=1.3e+02 Score=28.07 Aligned_cols=120 Identities=15% Similarity=0.115 Sum_probs=80.2
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
..+.+..++.++.+.+.|+.-|-+.- |. ++-.+.++.+++ ..+++... -.++...+..-.++|++.+.
T Consensus 42 T~D~~atv~Qi~~l~~aG~diVRvav--------p~--~~~a~al~~I~~~~~vPlvaD-iHf~~~lal~a~e~G~dklR 110 (366)
T 3noy_A 42 THDVEATLNQIKRLYEAGCEIVRVAV--------PH--KEDVEALEEIVKKSPMPVIAD-IHFAPSYAFLSMEKGVHGIR 110 (366)
T ss_dssp TTCHHHHHHHHHHHHHTTCCEEEEEC--------CS--HHHHHHHHHHHHHCSSCEEEE-CCSCHHHHHHHHHTTCSEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCC--------CC--hHHHHHHHHHHhcCCCCEEEe-CCCCHHHHHHHHHhCCCeEE
Confidence 37889999999999999998775542 11 233566777764 45665433 23678888888889999877
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec----------CCCHHHH----HHHHHHHhcCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL----------GEAEEDR----VGLLHTLATLP 261 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl----------get~ed~----~~~l~~l~~l~ 261 (386)
++-- .+ .+-+++.+.++.+++.|+.+.+++=-|- +.|.+.+ .++++.+.+++
T Consensus 111 INPG-------Ni---g~~~~~~~vv~~ak~~~~piRIGvN~GSL~~~ll~~yg~~~~eamVeSAl~~~~~~e~~g 176 (366)
T 3noy_A 111 INPG-------NI---GKEEIVREIVEEAKRRGVAVRIGVNSGSLEKDLLEKYGYPSAEALAESALRWSEKFEKWG 176 (366)
T ss_dssp ECHH-------HH---SCHHHHHHHHHHHHHHTCEEEEEEEGGGCCHHHHHHHSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred ECCc-------cc---CchhHHHHHHHHHHHcCCCEEEecCCcCCCHHHHHhcCCCCHHHHHHHHHHHHHHHHhCC
Confidence 6531 11 1345666788999999999887755552 2455444 55567777775
No 224
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=56.79 E-value=20 Score=31.11 Aligned_cols=68 Identities=13% Similarity=0.167 Sum_probs=42.7
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHh---ccCeeecc
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKA---GLTAYNHN 201 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~a---G~~~v~i~ 201 (386)
.++.+.+.|+..+.+.+....-.+... -++.++++++ .++++...-|..+.+.+.++.++ |++.+.++
T Consensus 151 ~~~~~~~~G~~~i~~~~~~~~~~~~g~----~~~~~~~i~~~~~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~vG 222 (244)
T 1vzw_A 151 TLDRLNKEGCARYVVTDIAKDGTLQGP----NLELLKNVCAATDRPVVASGGVSSLDDLRAIAGLVPAGVEGAIVG 222 (244)
T ss_dssp HHHHHHHTTCCCEEEEEC-------CC----CHHHHHHHHHTCSSCEEEESCCCSHHHHHHHHTTGGGTEEEEEEC
T ss_pred HHHHHHhCCCCEEEEeccCcccccCCC----CHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHhhccCCCceeeee
Confidence 344555689888877653211101111 2445555553 46788888888888999999999 99988875
No 225
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=56.66 E-value=65 Score=31.57 Aligned_cols=126 Identities=17% Similarity=0.245 Sum_probs=75.6
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecccC
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 203 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le 203 (386)
+..+.++.+.+.|++.+.+.+.. + ....+.+.++.+++. ++.+..- +..+.+.++.+.++|+|.+.++..
T Consensus 256 d~~era~aLveaGvd~I~Id~a~----g---~~~~v~~~i~~i~~~~~~~~vi~g-~v~t~e~a~~~~~aGad~i~vg~g 327 (511)
T 3usb_A 256 DAMTRIDALVKASVDAIVLDTAH----G---HSQGVIDKVKEVRAKYPSLNIIAG-NVATAEATKALIEAGANVVKVGIG 327 (511)
T ss_dssp THHHHHHHHHHTTCSEEEEECSC----T---TSHHHHHHHHHHHHHCTTSEEEEE-EECSHHHHHHHHHHTCSEEEECSS
T ss_pred chHHHHHHHHhhccceEEecccc----c---chhhhhhHHHHHHHhCCCceEEee-eeccHHHHHHHHHhCCCEEEECCC
Confidence 34555677788899988886532 1 235677888888754 3554331 235789999999999999987654
Q ss_pred ch----HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE-eEEeecCCCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 204 TS----REFYSKIITTRSYDERLETLKHVREAGINVCS-GGIIGLGEAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 204 ~~----~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~-~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
.. ........ ..++....+..+.+++.++++-+ +-| -+.+|+.+.+. +| .+.+.+.
T Consensus 328 ~gsi~~~~~~~g~g-~p~~~~l~~v~~~~~~~~iPVIa~GGI----~~~~di~kala----~G--A~~V~vG 388 (511)
T 3usb_A 328 PGSICTTRVVAGVG-VPQLTAVYDCATEARKHGIPVIADGGI----KYSGDMVKALA----AG--AHVVMLG 388 (511)
T ss_dssp CSTTCCHHHHHCCC-CCHHHHHHHHHHHHHTTTCCEEEESCC----CSHHHHHHHHH----TT--CSEEEES
T ss_pred CccccccccccCCC-CCcHHHHHHHHHHHHhCCCcEEEeCCC----CCHHHHHHHHH----hC--chhheec
Confidence 32 12222211 22455555556666667776332 222 26677776653 44 5555554
No 226
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=56.17 E-value=41 Score=31.74 Aligned_cols=129 Identities=16% Similarity=0.150 Sum_probs=65.9
Q ss_pred CHHHHHHHHHHHHHc-CCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE-EEecCCCC-HHHHHHHHHh-ccCe
Q 016599 123 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLE-KHQAIELKKA-GLTA 197 (386)
Q Consensus 123 s~eeI~~~~~~~~~~-G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~-~e~l~~Lk~a-G~~~ 197 (386)
++++-++.++.+++. |-. .+.+-. + .....++..++++.+.+.++.. .-....-+ .+.++++++. ++..
T Consensus 181 ~~~~d~~~v~avR~a~g~~~~l~vDa--N----~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~~l~~~~~iPI 254 (392)
T 3ddm_A 181 DDARDVRNALHVRELLGAATPLMADA--N----QGWDLPRARQMAQRLGPAQLDWLEEPLRADRPAAEWAELAQAAPMPL 254 (392)
T ss_dssp CHHHHHHHHHHHHHHHCSSSCEEEEC--T----TCCCHHHHHHHHHHHGGGCCSEEECCSCTTSCHHHHHHHHHHCSSCE
T ss_pred CHHHHHHHHHHHHHhcCCCceEEEeC--C----CCCCHHHHHHHHHHHHHhCCCEEECCCCccchHHHHHHHHHhcCCCE
Confidence 456656666665553 432 232311 1 1134566777777777766642 21112234 5667777664 2211
Q ss_pred eec-ccCchHHHHhh--------hC----CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 198 YNH-NLDTSREFYSK--------II----TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 198 v~i-~le~~~~~~~~--------i~----~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
..- ++.+..+..+. +. +-....+.++....+.+.|+.+..+. .++.=-+...+.+...++
T Consensus 255 a~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~----~~~~i~~aa~~hl~aa~p 327 (392)
T 3ddm_A 255 AGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVARAVVAAGLRYCPHY----LGAGIGLQASAHLLAAVP 327 (392)
T ss_dssp EECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHHHHHHTTCEECCEE----CSCHHHHHHHHHHHHHSC
T ss_pred EeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHHHHHHcCCEEEecC----CchHHHHHHHHHHHHhCC
Confidence 111 12222111111 11 12357888999999999999875443 244444556666666664
No 227
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=56.10 E-value=53 Score=30.65 Aligned_cols=73 Identities=8% Similarity=0.004 Sum_probs=37.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-cCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-LTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG-~~~v~i 200 (386)
+.++..+.++.+.+.|+..+.+.++... +.+. +. .+.++.+++ ..+++..+.|. +.+.++++.+.| +|.|.+
T Consensus 248 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~--~~~~-~~--~~~~~~i~~~~~iPvi~~Ggi-~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 248 PILTYTAAAALLNKHRIVYLHIAEVDWD--DAPD-TP--VSFKRALREAYQGVLIYAGRY-NAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTT--BCCC-CC--HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCcC--CCCC-cc--HHHHHHHHHHCCCcEEEeCCC-CHHHHHHHHHCCCcceehh
Confidence 4556666666666667666666543211 1110 00 133444442 34555555444 666666666665 666665
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
+
T Consensus 322 g 322 (365)
T 2gou_A 322 G 322 (365)
T ss_dssp C
T ss_pred c
Confidence 4
No 228
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=56.01 E-value=1.1e+02 Score=26.98 Aligned_cols=135 Identities=13% Similarity=0.118 Sum_probs=78.0
Q ss_pred cCcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHH
Q 016599 171 MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDR 250 (386)
Q Consensus 171 ~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~ 250 (386)
.++++..-....++-++.+.+.+|.|.+.+..-.. +.++..+.++.+++.|+.+-+.+ .|.+|
T Consensus 100 v~lPvLrKDfi~~~~qi~ea~~~GAD~ilLi~a~l-----------~~~~l~~l~~~a~~lGl~~lvEv-----~~~eE- 162 (251)
T 1i4n_A 100 TCRPILAKDFYIDTVQVKLASSVGADAILIIARIL-----------TAEQIKEIYEAAEELGMDSLVEV-----HSRED- 162 (251)
T ss_dssp CCSCEEEECCCCSTHHHHHHHHTTCSEEEEEGGGS-----------CHHHHHHHHHHHHTTTCEEEEEE-----CSHHH-
T ss_pred CCCCEEEeeCCCCHHHHHHHHHcCCCEEEEecccC-----------CHHHHHHHHHHHHHcCCeEEEEe-----CCHHH-
Confidence 46776554444666678889999999998754332 22455567788888888643322 25666
Q ss_pred HHHHHHHhcC-CCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCc
Q 016599 251 VGLLHTLATL-PTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGA 329 (386)
Q Consensus 251 ~~~l~~l~~l-~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Ga 329 (386)
++.+.++ | ++.++++.... .| + .++.+...++. ..+|...+.++.+-++- ++........ +
T Consensus 163 ---~~~A~~l~g--~~iIGinnr~l--~t-~----~~d~~~~~~l~----~~ip~~~~vIaEsGI~t-~edv~~~~~~-a 224 (251)
T 1i4n_A 163 ---LEKVFSVIR--PKIIGINTRDL--DT-F----EIKKNVLWELL----PLVPDDTVVVAESGIKD-PRELKDLRGK-V 224 (251)
T ss_dssp ---HHHHHTTCC--CSEEEEECBCT--TT-C----CBCTTHHHHHG----GGSCTTSEEEEESCCCC-GGGHHHHTTT-C
T ss_pred ---HHHHHhcCC--CCEEEEeCccc--cc-C----CCCHHHHHHHH----HhCCCCCEEEEeCCCCC-HHHHHHHHHh-C
Confidence 4455566 6 78888887421 11 1 12323322222 23455444555433332 3334556677 9
Q ss_pred cccccCCcccc
Q 016599 330 NSIFTGEKLLT 340 (386)
Q Consensus 330 n~~~~g~~~~t 340 (386)
+.++.|+.+..
T Consensus 225 ~avLVG~aimr 235 (251)
T 1i4n_A 225 NAVLVGTSIMK 235 (251)
T ss_dssp SEEEECHHHHH
T ss_pred CEEEEcHHHcC
Confidence 99988885543
No 229
>3lye_A Oxaloacetate acetyl hydrolase; (alpha/beta)8 barrel; 1.30A {Cryphonectria parasitica} PDB: 3m0j_A* 3m0k_A
Probab=56.00 E-value=1.2e+02 Score=27.56 Aligned_cols=154 Identities=10% Similarity=-0.001 Sum_probs=89.0
Q ss_pred cCCCCHHHHHHHHHhccCeeecccCch-HHHHhhhCC-CCCHHHHHHHHHHHHHc---CCeeeEeEEeecCCCHHHHHHH
Q 016599 179 LGMLEKHQAIELKKAGLTAYNHNLDTS-REFYSKIIT-TRSYDERLETLKHVREA---GINVCSGGIIGLGEAEEDRVGL 253 (386)
Q Consensus 179 ~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~-~~s~~~~l~~i~~a~~~---Gi~v~~~~i~Glget~ed~~~~ 253 (386)
++..+.-..+.+.++|++.+.++=++. ...+-.=.. .-++++.+..++.+.+. .+++.+++=.|.| +.+++.++
T Consensus 30 ~~a~D~~sA~l~e~aGf~ai~vsG~~~a~s~~G~pD~~~vt~~em~~~~~~i~r~~~~~~PviaD~d~Gyg-~~~~v~~~ 108 (307)
T 3lye_A 30 PGVYDGLSARTAMELGFKSLYMTGAGTTASRLGQPDLAIAQLHDMRDNADMIANLDPFGPPLIADMDTGYG-GPIMVART 108 (307)
T ss_dssp EEECSHHHHHHHHHTTCSCEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHTSSTTSCCEEEECTTCSS-SHHHHHHH
T ss_pred ecCcCHHHHHHHHHcCCCEEEeccHHHHHHhcCCCCCCCCCHHHHHHHHHhhhccCCCCCcEEEECCCCCC-CHHHHHHH
Confidence 345678888888999999998743333 221111111 23799998888887764 3788888888887 47888999
Q ss_pred HHHHhcCCCCCCeEeeeeee-ecCCCCCCCCCCCCHHHHHHHHHHHHHh----CCCcceee--cCccc-ccCh--hHHHh
Q 016599 254 LHTLATLPTHPESVPINALL-AVKGTPLQDQKPVEIWEMIRMIATARIV----MPKAMVRL--SAGRV-RFSM--PEQAL 323 (386)
Q Consensus 254 l~~l~~l~~~~~~v~~~~f~-P~~gT~l~~~~~~s~~e~~~~~a~~R~~----lp~~~i~i--~~g~~-~~~~--~~~~~ 323 (386)
++.+.+.| +.-+.+---. |..-.-+...+..+.+++...+..++.. -++..|.. .+... .+.. .-...
T Consensus 109 v~~l~~aG--aagv~iEDq~~~k~cgh~~gk~l~~~~e~~~rI~Aa~~A~~~~~~d~~I~ARTDa~~~~gldeAi~Ra~a 186 (307)
T 3lye_A 109 VEHYIRSG--VAGAHLEDQILTKRCGHLSGKKVVSRDEYLVRIRAAVATKRRLRSDFVLIARTDALQSLGYEECIERLRA 186 (307)
T ss_dssp HHHHHHTT--CCEEEECCBCCCC--------CBCCHHHHHHHHHHHHHHHHHTTCCCEEEEEECCHHHHCHHHHHHHHHH
T ss_pred HHHHHHcC--CeEEEEcCCCCCcccCCCCCCeecCHHHHHHHHHHHHHHHHhcCCCeEEEEechhhhccCHHHHHHHHHH
Confidence 99888886 5556552211 2111112234456788877777666543 24444422 22110 1111 11122
Q ss_pred hhhcCccccccC
Q 016599 324 CFLAGANSIFTG 335 (386)
Q Consensus 324 ~l~~Gan~~~~g 335 (386)
...+||+.+|..
T Consensus 187 y~eAGAD~ifi~ 198 (307)
T 3lye_A 187 ARDEGADVGLLE 198 (307)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHCCCCEEEec
Confidence 356899998654
No 230
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=55.89 E-value=1e+02 Score=26.65 Aligned_cols=171 Identities=12% Similarity=0.081 Sum_probs=91.5
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEE-e----cC---CC--CHHHHHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCC-T----LG---ML--EKHQAIE 189 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~-t----~g---~l--~~e~l~~ 189 (386)
..+++.+.+.++.+.+.|...+...+ .+.++.+++ .++++.. + .| .+ +.+.++.
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~~~~---------------~~~i~~ir~~v~~Pvig~~k~d~~~~~~~I~~~~~~i~~ 96 (232)
T 3igs_A 32 LDKPEIVAAMALAAEQAGAVAVRIEG---------------IDNLRMTRSLVSVPIIGIIKRDLDESPVRITPFLDDVDA 96 (232)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEEEES---------------HHHHHHHHTTCCSCEEEECBCCCSSCCCCBSCSHHHHHH
T ss_pred CCCcchHHHHHHHHHHCCCeEEEECC---------------HHHHHHHHHhcCCCEEEEEeecCCCcceEeCccHHHHHH
Confidence 45788999999999999988764421 133555663 3556431 1 11 22 4567889
Q ss_pred HHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEee
Q 016599 190 LKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPI 269 (386)
Q Consensus 190 Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~ 269 (386)
++++|+|.|.++.-.. .++.... +.++.+++.|+.+...+ .|.++. ..+.+.| ++.+.+
T Consensus 97 ~~~~Gad~V~l~~~~~-------~~p~~l~---~~i~~~~~~g~~v~~~v-----~t~eea----~~a~~~G--ad~Ig~ 155 (232)
T 3igs_A 97 LAQAGAAIIAVDGTAR-------QRPVAVE---ALLARIHHHHLLTMADC-----SSVDDG----LACQRLG--ADIIGT 155 (232)
T ss_dssp HHHHTCSEEEEECCSS-------CCSSCHH---HHHHHHHHTTCEEEEEC-----CSHHHH----HHHHHTT--CSEEEC
T ss_pred HHHcCCCEEEECcccc-------CCHHHHH---HHHHHHHHCCCEEEEeC-----CCHHHH----HHHHhCC--CCEEEE
Confidence 9999999987643221 1122333 45566677777644332 355554 3445665 777765
Q ss_pred eeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCcc
Q 016599 270 NALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKL 338 (386)
Q Consensus 270 ~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~ 338 (386)
+.+-..+++. ...++.+.+.+ + +.. + ..-+..|-+. .++.-...+.+||+.++.|..+
T Consensus 156 ~~~g~t~~~~---~~~~~~~~i~~-l---~~~--~-ipvIA~GGI~-t~~d~~~~~~~GadgV~VGsal 213 (232)
T 3igs_A 156 TMSGYTTPDT---PEEPDLPLVKA-L---HDA--G-CRVIAEGRYN-SPALAAEAIRYGAWAVTVGSAI 213 (232)
T ss_dssp TTTTSSSSSC---CSSCCHHHHHH-H---HHT--T-CCEEEESCCC-SHHHHHHHHHTTCSEEEECHHH
T ss_pred cCccCCCCCC---CCCCCHHHHHH-H---Hhc--C-CcEEEECCCC-CHHHHHHHHHcCCCEEEEehHh
Confidence 3321111221 12234333222 2 221 2 2223322222 2333456778899999988744
No 231
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=55.68 E-value=26 Score=33.01 Aligned_cols=99 Identities=8% Similarity=0.047 Sum_probs=56.2
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhhhC------------CCCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKII------------TTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~i~------------~~~s~~ 219 (386)
..++..++++.+.+.++.. .-....-+.+.++++++.- .+++.. |.. ....+.+. +-....
T Consensus 211 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 288 (392)
T 2poz_A 211 TTDETIRFCRKIGELDICFVEEPCDPFDNGALKVISEQI--PLPIAVGERVYTRFGFRKIFELQACGIIQPDIGTAGGLM 288 (392)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECCSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHTTTCCSEECCCTTTSSCHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4577788888887777653 2112224567777777652 234322 222 12222221 123688
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.+++.|+.+..+.+ + +.=-+...+.+...++
T Consensus 289 ~~~~i~~~A~~~g~~~~~h~~---~-s~i~~aa~~hlaaa~~ 326 (392)
T 2poz_A 289 ETKKICAMAEAYNMRVAPHVC---G-SSLIETATLQLEANIT 326 (392)
T ss_dssp HHHHHHHHHHTTTCEECCCCC---S-SHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEecCCC---C-CHHHHHHHHHHHHhCC
Confidence 889999999999998666543 2 3334455556665553
No 232
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=55.67 E-value=34 Score=31.42 Aligned_cols=22 Identities=14% Similarity=0.194 Sum_probs=11.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCM 144 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l 144 (386)
+++.+++.++.+.+.|+..|.+
T Consensus 149 ~~~~~~~~~~~~~~~G~~~i~l 170 (325)
T 3eeg_A 149 DQAFLARMVEAVIEAGADVVNI 170 (325)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEC
T ss_pred hHHHHHHHHHHHHhcCCCEEEe
Confidence 4555555555555555555444
No 233
>2yw3_A 4-hydroxy-2-oxoglutarate aldolase/2-deydro-3- deoxyphosphogluconate aldolase; structural genomics, NPPSFA; 1.67A {Thermus thermophilus} PDB: 2yw4_A
Probab=55.63 E-value=94 Score=26.25 Aligned_cols=171 Identities=15% Similarity=0.124 Sum_probs=94.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
+.++.++.++.+.+.|++-+-+.- . .+ .-.+.++.+++..+.+-... .++.+.++...++|.+.+..+-
T Consensus 23 ~~~~~~~~~~~l~~gGv~~iel~~--k----~~----~~~~~i~~~~~~~~~~gag~-vl~~d~~~~A~~~GAd~v~~~~ 91 (207)
T 2yw3_A 23 GGEDLLGLARVLEEEGVGALEITL--R----TE----KGLEALKALRKSGLLLGAGT-VRSPKEAEAALEAGAAFLVSPG 91 (207)
T ss_dssp SCCCHHHHHHHHHHTTCCEEEEEC--S----ST----HHHHHHHHHTTSSCEEEEES-CCSHHHHHHHHHHTCSEEEESS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeC--C----Ch----HHHHHHHHHhCCCCEEEeCe-EeeHHHHHHHHHcCCCEEEcCC
Confidence 455677778888888998775542 1 11 22355555555222222222 5688999999999999886531
Q ss_pred CchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCC
Q 016599 203 DTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQD 282 (386)
Q Consensus 203 e~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~ 282 (386)
. + .+.++.+++.|+. ++.|. .|.+++..- .+.| .+.+.++ |...
T Consensus 92 -~------------d----~~v~~~~~~~g~~----~i~G~-~t~~e~~~A----~~~G--ad~v~~f-----pa~~--- 135 (207)
T 2yw3_A 92 -L------------L----EEVAALAQARGVP----YLPGV-LTPTEVERA----LALG--LSALKFF-----PAEP--- 135 (207)
T ss_dssp -C------------C----HHHHHHHHHHTCC----EEEEE-CSHHHHHHH----HHTT--CCEEEET-----TTTT---
T ss_pred -C------------C----HHHHHHHHHhCCC----EEecC-CCHHHHHHH----HHCC--CCEEEEe-----cCcc---
Confidence 1 1 1455666777865 34453 366665443 3455 7777772 2111
Q ss_pred CCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHH
Q 016599 283 QKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLM 352 (386)
Q Consensus 283 ~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~ 352 (386)
....+ .+...+..+|+.-+ +..|=++ .+.....+.+|++.+..+..+.. .++++..+.
T Consensus 136 ---~gG~~---~lk~l~~~~~~ipv-vaiGGI~--~~n~~~~l~aGa~~vavgSai~~---~d~~~i~~~ 193 (207)
T 2yw3_A 136 ---FQGVR---VLRAYAEVFPEVRF-LPTGGIK--EEHLPHYAALPNLLAVGGSWLLQ---GNLEAVRAK 193 (207)
T ss_dssp ---TTHHH---HHHHHHHHCTTCEE-EEBSSCC--GGGHHHHHTCSSBSCEEESGGGS---SCHHHHHHH
T ss_pred ---ccCHH---HHHHHHhhCCCCcE-EEeCCCC--HHHHHHHHhCCCcEEEEehhhhC---CCHHHHHHH
Confidence 11122 23445556665322 2222233 33346677899999977764433 454444333
No 234
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=55.62 E-value=57 Score=28.23 Aligned_cols=71 Identities=13% Similarity=0.085 Sum_probs=42.8
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHH-HhccCeeecc
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELK-KAGLTAYNHN 201 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk-~aG~~~v~i~ 201 (386)
.+.++.+.+.|+++|. ++|+.++..-....+.+.++++.... .+++..-.| ++.+.+..+. ..|++.+..+
T Consensus 136 ~~ale~L~~lGv~rIL-TSG~~~~~~a~~g~~~L~~Lv~~a~~-ri~Im~GgG-V~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 136 KKSIDQLVALGFTRIL-LHGSSNGEPIIENIKHIKALVEYANN-RIEIMVGGG-VTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHHTTCCEEE-ECSCSSCCCGGGGHHHHHHHHHHHTT-SSEEEECSS-CCTTTHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHcCCCEEE-CCCCCCCCcHHHHHHHHHHHHHhhCC-CeEEEeCCC-CCHHHHHHHHHhhCCCEEccc
Confidence 4446677788999985 44443331123456777777765332 456655445 4555566665 6799988863
No 235
>3fa4_A 2,3-dimethylmalate lyase; alpha/beta barrel, helix swapping; 2.18A {Aspergillus niger} PDB: 3fa3_A
Probab=55.56 E-value=37 Score=30.89 Aligned_cols=67 Identities=24% Similarity=0.290 Sum_probs=39.7
Q ss_pred CCCHHHHHHHHHHHHHc----CCcEEEEecccCCCCCChhhHHHHHHHHHHHh---hcCcEEEEecCCCCHHHHHHHHHh
Q 016599 121 LMTKDAVMQAAQKAKEA----GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~----G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik---~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
..+.+|..+.++.+++. +. .+++..= ++. .....+-+.|++++ +.|..+..-.|..+.+.++++.++
T Consensus 131 l~~~~e~~~rI~Aa~~A~~~~~~-d~~I~AR-TDa----~~~~gldeAi~Ra~ay~eAGAD~ifi~g~~~~~ei~~~~~~ 204 (302)
T 3fa4_A 131 LVDTDTYVTRIRAAVQARQRIGS-DIVVIAR-TDS----LQTHGYEESVARLRAARDAGADVGFLEGITSREMARQVIQD 204 (302)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHTC-CCEEEEE-ECC----HHHHCHHHHHHHHHHHHTTTCSEEEETTCCCHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHHHHhcCC-CEEEEEE-ecc----cccCCHHHHHHHHHHHHHcCCCEEeecCCCCHHHHHHHHHH
Confidence 46888888877776542 43 3444331 111 11223445555554 568776666777788888888765
No 236
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=55.55 E-value=31 Score=32.62 Aligned_cols=127 Identities=8% Similarity=0.011 Sum_probs=65.4
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChh-hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKT-NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~-~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
++++-++.++.+++ .|-+ .+.+-. + ... ..++..++++.+.+.++.. .-....-+.+.++++++.- .+
T Consensus 182 ~~~~d~~~v~avR~a~G~d~~l~vDa--n----~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~--~i 253 (394)
T 3mqt_A 182 SDKEIVAYLRELREVIGWDMDMMVDC--L----YRWTDWQKARWTFRQLEDIDLYFIEACLQHDDLIGHQKLAAAI--NT 253 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEEC--T----TCCSCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHS--SS
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEC--C----CCCCCHHHHHHHHHHHhhcCCeEEECCCCcccHHHHHHHHhhC--CC
Confidence 46666666665554 3432 233311 1 113 4566777777777666542 1111122456666666641 23
Q ss_pred eccc-Cc---hH---HHHh---------hhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 199 NHNL-DT---SR---EFYS---------KIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 199 ~i~l-e~---~~---~~~~---------~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
++.. |+ .. +..+ ++.+-....+.++....+...|+.+..+.+ ++.=-....+.+...++
T Consensus 254 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~p 328 (394)
T 3mqt_A 254 RLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELLRIMDICEHHNAQLMPHNW----KTGITAAAARHFGIVCH 328 (394)
T ss_dssp EEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHHHHHHHHHHHTCEECCCCC----SCHHHHHHHHHHHHHCT
T ss_pred CEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeccCC----CchHHHHHHHHHHHhCC
Confidence 3321 11 11 1111 111223688889999999999998766542 34434455666665553
No 237
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=55.37 E-value=95 Score=26.26 Aligned_cols=176 Identities=10% Similarity=-0.038 Sum_probs=90.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEE--EecCCCCHHHHHHHHHhccCe
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVC--CTLGMLEKHQAIELKKAGLTA 197 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~--~t~g~l~~e~l~~Lk~aG~~~ 197 (386)
.+.++.++.++.+ ..|++-+-++. +..+..=.+.++.+++. +..+. +..-......++.+.++|++.
T Consensus 16 ~~~~~~~~~~~~~-~~~vd~ie~g~--------~~~~~~G~~~i~~lr~~~~~~~i~ld~~l~d~p~~~~~~~~~aGad~ 86 (218)
T 3jr2_A 16 TNLTDAVAVASNV-ASYVDVIEVGT--------ILAFAEGMKAVSTLRHNHPNHILVCDMKTTDGGAILSRMAFEAGADW 86 (218)
T ss_dssp SSHHHHHHHHHHH-GGGCSEEEECH--------HHHHHHTTHHHHHHHHHCTTSEEEEEEEECSCHHHHHHHHHHHTCSE
T ss_pred CCHHHHHHHHHHh-cCCceEEEeCc--------HHHHhcCHHHHHHHHHhCCCCcEEEEEeecccHHHHHHHHHhcCCCE
Confidence 4678888888875 44565443321 33444456677777754 44432 221122345688999999999
Q ss_pred eecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEee-eeeeecC
Q 016599 198 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPI-NALLAVK 276 (386)
Q Consensus 198 v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~-~~f~P~~ 276 (386)
+.+..++.+ +...+.++.+++.|+..... ++|. .|.++.... .+++ .+.+.+ ..+.|
T Consensus 87 i~vh~~~~~------------~~~~~~~~~~~~~g~~~~~d-~l~~-~T~~~~~~~----~~~g--~d~v~~~~~~~~-- 144 (218)
T 3jr2_A 87 ITVSAAAHI------------ATIAACKKVADELNGEIQIE-IYGN-WTMQDAKAW----VDLG--ITQAIYHRSRDA-- 144 (218)
T ss_dssp EEEETTSCH------------HHHHHHHHHHHHHTCEEEEE-CCSS-CCHHHHHHH----HHTT--CCEEEEECCHHH--
T ss_pred EEEecCCCH------------HHHHHHHHHHHHhCCcccee-eeec-CCHHHHHHH----HHcC--ccceeeeecccc--
Confidence 987554421 12235566677888764321 3444 365544443 2334 555444 11112
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCc
Q 016599 277 GTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEK 337 (386)
Q Consensus 277 gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~ 337 (386)
+. .. .....+++.++-+ .+. ++..+-+.+| ++++.....+.+||+.+..|..
T Consensus 145 ~~--~g-~~~~~~~l~~i~~-~~~--~~~pi~v~GG---I~~~~~~~~~~aGAd~vvvGsa 196 (218)
T 3jr2_A 145 EL--AG-IGWTTDDLDKMRQ-LSA--LGIELSITGG---IVPEDIYLFEGIKTKTFIAGRA 196 (218)
T ss_dssp HH--HT-CCSCHHHHHHHHH-HHH--TTCEEEEESS---CCGGGGGGGTTSCEEEEEESGG
T ss_pred cc--CC-CcCCHHHHHHHHH-HhC--CCCCEEEECC---CCHHHHHHHHHcCCCEEEEchh
Confidence 11 11 1124444333322 221 2322333332 2344445688899999988863
No 238
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=55.09 E-value=27 Score=32.93 Aligned_cols=110 Identities=8% Similarity=0.062 Sum_probs=57.1
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
++++-++.++.+++ .|-. .+.+-. + .-...++..++++.+.+.++.. .-....-+.+.+.+|++.- .++
T Consensus 195 ~~~~d~~~v~avR~a~G~~~~l~vDa--N----~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iP 266 (383)
T 3toy_A 195 DLATDEAMIKGLRALLGPDIALMLDF--N----QSLDPAEATRRIARLADYDLTWIEEPVPQENLSGHAAVRERS--EIP 266 (383)
T ss_dssp CHHHHHHHHHHHHHHHCTTSEEEEEC--T----TCSCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHC--SSC
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeC--C----CCCCHHHHHHHHHHHHhhCCCEEECCCCcchHHHHHHHHhhc--CCC
Confidence 45555566666555 3432 333321 1 1134567777777777766542 2111223456667776641 233
Q ss_pred ccc-Cc---hHHHHhhh------------CCCCCHHHHHHHHHHHHHcCCeeeEeEE
Q 016599 200 HNL-DT---SREFYSKI------------ITTRSYDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 200 i~l-e~---~~~~~~~i------------~~~~s~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
+.. |+ ..+..+.+ .+-....+.++....+++.|+.+..+.+
T Consensus 267 Ia~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~~h~~ 323 (383)
T 3toy_A 267 IQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLNVAGQADAASIPMSSHIL 323 (383)
T ss_dssp EEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHHHHHHHHHHTCCBCCCSC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCH
Confidence 322 12 11111111 1123578889999999999998766543
No 239
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=55.00 E-value=84 Score=28.37 Aligned_cols=75 Identities=17% Similarity=0.152 Sum_probs=49.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC--h---hhHHHHHHHHHHHhhc----CcEEEEecCCCC-HHHH----
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR--K---TNFNQILEYVKDIRDM----GMEVCCTLGMLE-KHQA---- 187 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge--~---~~~~~l~~~i~~ik~~----g~~i~~t~g~l~-~e~l---- 187 (386)
.+.+..+.+++.+.+.|.++|-++-- .|. . ..++.+.+.|+.+++. .+.+.+..+.++ ++.+
T Consensus 97 ~~~e~K~~Ea~~Av~~GAdEIDmVin----ig~lk~~~~g~~~~V~~eI~~v~~a~~~~~lKVIlEt~~Lt~~e~i~~A~ 172 (297)
T 4eiv_A 97 GTPDTVSLEAVGALKDGADEIECLID----WRRMNENVADGESRIRLLVSEVKKVVGPKTLKVVLSGGELQGGDIISRAA 172 (297)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEECC----THHHHHCHHHHHHHHHHHHHHHHHHHTTSEEEEECCSSCCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeeee----HHHHhcccCCcHHHHHHHHHHHHHHhcCCceEEEEecccCCcHHHHHHHH
Confidence 57788888999999999999977531 111 1 2456777777777643 245667777775 4423
Q ss_pred HHHHHhccCeeec
Q 016599 188 IELKKAGLTAYNH 200 (386)
Q Consensus 188 ~~Lk~aG~~~v~i 200 (386)
+...++|.|.|--
T Consensus 173 ~ia~~AGADFVKT 185 (297)
T 4eiv_A 173 VAALEGGADFLQT 185 (297)
T ss_dssp HHHHHHTCSEEEC
T ss_pred HHHHHhCCCEEEc
Confidence 2335789998864
No 240
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=54.98 E-value=54 Score=31.95 Aligned_cols=70 Identities=16% Similarity=0.160 Sum_probs=47.9
Q ss_pred HHHHHHcCCcEEEEecccCCC--------CCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRDT--------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~--------~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.+.++.+.... .|. ..+..+.++.+.+++.++++...-|..+.+.+.++..+|++.+.++
T Consensus 284 a~~l~~aGaD~I~vg~g~Gs~~~t~~~~g~g~-p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V~vG 361 (490)
T 4avf_A 284 AKALAEAGADAVKVGIGPGSICTTRIVAGVGV-PQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCVMMG 361 (490)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHTCBCC-CHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEECCCCCcCCCccccCCCCc-cHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCeeeec
Confidence 345667899888774221110 111 2445566666666666889888889988888888889999998874
No 241
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=54.86 E-value=22 Score=30.91 Aligned_cols=39 Identities=23% Similarity=0.131 Sum_probs=31.1
Q ss_pred HHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 163 EYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 163 ~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++++++++.++++...-|..+.+.+.++.++|++.+.++
T Consensus 172 ~~i~~l~~~~ipvIA~GGI~t~~d~~~~~~~GadgV~VG 210 (232)
T 3igs_A 172 PLVKALHDAGCRVIAEGRYNSPALAAEAIRYGAWAVTVG 210 (232)
T ss_dssp HHHHHHHHTTCCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHhcCCcEEEECCCCCHHHHHHHHHcCCCEEEEe
Confidence 444455533778878888889999999999999999987
No 242
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=54.65 E-value=14 Score=34.86 Aligned_cols=98 Identities=12% Similarity=0.042 Sum_probs=51.9
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhhh------------CCCCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKI------------ITTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~i------------~~~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.++++++. + .+++.. |.. .+..+.+ .+ ....
T Consensus 220 ~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~-~-~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit 296 (388)
T 2nql_A 220 TPERALELIAEMQPFDPWFAEAPVWTEDIAGLEKVSKN-T-DVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH-KGIT 296 (388)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHTS-C-CSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH-HCHH
T ss_pred CHHHHHHHHHHHhhcCCCEEECCCChhhHHHHHHHHhh-C-CCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC-CCHH
Confidence 456777777777766654 2211222355666666653 1 233321 221 1222222 12 3577
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.++.++.++++|+.+..+.+ .|+.=-+...+++...+
T Consensus 297 ~~~~i~~~A~~~g~~~~~h~~---~es~i~~aa~~hlaa~~ 334 (388)
T 2nql_A 297 NFIRIGALAAEHGIDVIPHAT---VGAGIFLAASLQASSTL 334 (388)
T ss_dssp HHHHHHHHHHHHTCEECCCCC---SSCSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcCCeEEeecC---CCcHHHHHHHHHHHHhC
Confidence 778888888888887655433 34443455556666555
No 243
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=54.63 E-value=26 Score=33.08 Aligned_cols=81 Identities=9% Similarity=-0.021 Sum_probs=45.1
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhhhCC------------CCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSKIIT------------TRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~i~~------------~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.++.+++.- .+++.. |. ..+..+.+.. -....
T Consensus 219 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 296 (393)
T 2og9_A 219 DRPTAQRMCRIFEPFNLVWIEEPLDAYDHEGHAALALQF--DTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGIT 296 (393)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred CHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHH
Confidence 457777888887776654 22112223566777776642 233321 22 1122221111 12577
Q ss_pred HHHHHHHHHHHcCCeeeEeE
Q 016599 220 ERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~ 239 (386)
+.++.++.++++|+.+..+.
T Consensus 297 ~~~~i~~~A~~~gi~~~~h~ 316 (393)
T 2og9_A 297 PFLKIASLAEHAGLMLAPHF 316 (393)
T ss_dssp HHHHHHHHHHHTTCEECCCS
T ss_pred HHHHHHHHHHHcCCEEeccC
Confidence 88899999999999866543
No 244
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=54.53 E-value=28 Score=32.53 Aligned_cols=17 Identities=0% Similarity=0.005 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHhhcCcE
Q 016599 158 FNQILEYVKDIRDMGME 174 (386)
Q Consensus 158 ~~~l~~~i~~ik~~g~~ 174 (386)
.+...++++.+.+.|+.
T Consensus 249 ~~~~~~la~~l~~~Gvd 265 (361)
T 3gka_A 249 AATFGHVARELGRRRIA 265 (361)
T ss_dssp HHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHcCCC
Confidence 34555555555555554
No 245
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=54.49 E-value=77 Score=29.30 Aligned_cols=100 Identities=11% Similarity=0.105 Sum_probs=58.0
Q ss_pred hHHHHHHHHHHHhh--cCcEEEEe-cCCCCHHHHHHHHHhccCeeecc----cCchHHHHhhhC------------CCCC
Q 016599 157 NFNQILEYVKDIRD--MGMEVCCT-LGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKII------------TTRS 217 (386)
Q Consensus 157 ~~~~l~~~i~~ik~--~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~----le~~~~~~~~i~------------~~~s 217 (386)
..++..++++.+.+ .++...-. ...-+.+.++.+++.- .+++. +.+..+..+.+. +-..
T Consensus 197 ~~~~a~~~~~~l~~~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GG 274 (366)
T 1tkk_A 197 RPKEAVTAIRKMEDAGLGIELVEQPVHKDDLAGLKKVTDAT--DTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGG 274 (366)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTS
T ss_pred CHHHHHHHHHHHhhcCCCceEEECCCCcccHHHHHHHHhhC--CCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcC
Confidence 45667777777777 66542211 1223566677776642 23331 112122222221 1135
Q ss_pred HHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 218 YDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 218 ~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
..+.++.++.++++|+.+..+.+ .|+.--+...+.+...++
T Consensus 275 it~~~~i~~~A~~~g~~~~~~~~---~es~i~~~a~~~laaa~~ 315 (366)
T 1tkk_A 275 ISGAEKINAMAEACGVECMVGSM---IETKLGITAAAHFAASKR 315 (366)
T ss_dssp HHHHHHHHHHHHHHTCCEEECCS---SCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCcEEecCc---cccHHHHHHHHHHHHcCC
Confidence 78888999999999998755543 577777777788877764
No 246
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=54.28 E-value=35 Score=31.82 Aligned_cols=97 Identities=11% Similarity=0.144 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc----CchHHHHhhh------------CCCCCHHHH
Q 016599 159 NQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL----DTSREFYSKI------------ITTRSYDER 221 (386)
Q Consensus 159 ~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l----e~~~~~~~~i------------~~~~s~~~~ 221 (386)
++..++++.+.+.++.. .-....-+.+.+..+++.- .+++.. .+..+..+.+ .+-....+.
T Consensus 202 ~~a~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~ 279 (370)
T 1chr_A 202 QVASVYIPELEALGVELIEQPVGRENTQALRRLSDNN--RVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSAT 279 (370)
T ss_dssp THHHHHTHHHHTTTEEEEECCSCTTCHHHHHHHHHHS--CSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHH
T ss_pred HHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHH
Confidence 45666666666666542 1111223455666666541 233321 1222222222 122358889
Q ss_pred HHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 222 LETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 222 l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
++....+.+.|+.+..+.++ ++.=-+...++++..+
T Consensus 280 ~~i~~~A~~~g~~~~~~~~~---es~i~~aa~~hlaaa~ 315 (370)
T 1chr_A 280 QKIAAVAEASGIASYGGTML---DSTIGTSVALQLYSTV 315 (370)
T ss_dssp HHHHHHHHHHTCEEEECCSC---CTTHHHHHHHHHHTTS
T ss_pred HHHHHHHHHcCCeEEecCCC---ccHHHHHHHHHHHHhC
Confidence 99999999999987655443 3333345556666555
No 247
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=54.18 E-value=31 Score=31.15 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=37.9
Q ss_pred HHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 132 QKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+++.+.|.+.|.+-. ...+.+.+.++.++. .+.+..+-| ++.+.++.+.+.|+|.+++|
T Consensus 212 ~eAl~aGaD~I~LDn---------~~~~~l~~av~~~~~-~v~ieaSGG-It~~~i~~~a~tGVD~IsvG 270 (287)
T 3tqv_A 212 NQAIAAKADIVMLDN---------FSGEDIDIAVSIARG-KVALEVSGN-IDRNSIVAIAKTGVDFISVG 270 (287)
T ss_dssp HHHHHTTCSEEEEES---------CCHHHHHHHHHHHTT-TCEEEEESS-CCTTTHHHHHTTTCSEEECS
T ss_pred HHHHHcCCCEEEEcC---------CCHHHHHHHHHhhcC-CceEEEECC-CCHHHHHHHHHcCCCEEEEC
Confidence 344456776555421 123556666666553 355555544 68899999999999999875
No 248
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=54.06 E-value=34 Score=31.47 Aligned_cols=126 Identities=9% Similarity=0.148 Sum_probs=63.0
Q ss_pred CHHHHHHHHHHHHHcCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcE--EEEec-CCCCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKEAGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME--VCCTL-GMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~--i~~t~-g~l~~e~l~~Lk~aG~~~v 198 (386)
++++-++.++.+++.|-+ .+.+-. + .....++..++++.+.+.++. ..-.+ ..-+.+.+++|++.- .+
T Consensus 165 ~~~~d~~~v~avr~~g~~~~l~vDa--n----~~~~~~~a~~~~~~l~~~~i~~~~iE~P~~~~~~~~~~~l~~~~--~i 236 (345)
T 2zad_A 165 NLKEDIEAVEEIAKVTRGAKYIVDA--N----MGYTQKEAVEFARAVYQKGIDIAVYEQPVRREDIEGLKFVRFHS--PF 236 (345)
T ss_dssp CHHHHHHHHHHHHHHSTTCEEEEEC--T----TCSCHHHHHHHHHHHHHTTCCCSEEECCSCTTCHHHHHHHHHHS--SS
T ss_pred CHHHHHHHHHHHHhhCCCCeEEEEC--C----CCCCHHHHHHHHHHHHhcCCCeeeeeCCCCcccHHHHHHHHHhC--CC
Confidence 455555555655554432 233321 1 113456677777777776665 32211 123456677776642 23
Q ss_pred eccc-Cc---hHHHHhhh------------CCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 199 NHNL-DT---SREFYSKI------------ITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 199 ~i~l-e~---~~~~~~~i------------~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
++.. |+ ..+..+.+ .+ ....+.++.++.++++|+.+..+.+ .|+.=-+...+.+...+
T Consensus 237 pia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~-GGit~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hlaa~~ 310 (345)
T 2zad_A 237 PVAADESARTKFDVMRLVKEEAVDYVNIKLMK-SGISDALAIVEIAESSGLKLMIGCM---GESSLGINQSVHFALGT 310 (345)
T ss_dssp CEEESTTCCSHHHHHHHHHHTCCSEEEECHHH-HHHHHHHHHHHHHHTTTCEEEECCS---SCCHHHHHHHHHHHHHH
T ss_pred CEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc-ccHHHHHHHHHHHHHcCCeEEEecC---cccHHHHHHHHHHHHcC
Confidence 3322 22 11111111 12 2456667777778888887554432 45655555566665555
No 249
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=53.80 E-value=48 Score=31.39 Aligned_cols=99 Identities=4% Similarity=-0.113 Sum_probs=52.1
Q ss_pred hhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhh--------h----CCCCCH
Q 016599 156 TNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSK--------I----ITTRSY 218 (386)
Q Consensus 156 ~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~--------i----~~~~s~ 218 (386)
...++..++++.+.+.++.. .-....-+.+.++++++.- .+++.. |+. .+..+. + .+-...
T Consensus 219 ~~~~~A~~~~~~l~~~~i~~iEeP~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGi 296 (404)
T 4e5t_A 219 FTVSGAKRLARRLEAYDPLWFEEPIPPEKPEDMAEVARYT--SIPVATGERLCTKYEFSRVLETGAASILQMNLGRVGGL 296 (404)
T ss_dssp BCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHC--SSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTSSCH
T ss_pred cCHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHhCCCCEEecCccccCCH
Confidence 34577777888887776542 2111223566677776641 233322 111 111111 1 112357
Q ss_pred HHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 219 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.++....+...|+.+..+.. ++.=-....+++...+
T Consensus 297 t~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~ 334 (404)
T 4e5t_A 297 LEAKKIAAMAECHSAQIAPHLY----CGPLVALANIQLATCS 334 (404)
T ss_dssp HHHHHHHHHHHHTTCEECCCCS----SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCEEeecCC----CcHHHHHHHHHHHHhC
Confidence 7888888888888888765532 2333345555666555
No 250
>1tqx_A D-ribulose-5-phosphate 3-epimerase, putative; structural genomics, protein structure initiative, PSI; 2.00A {Plasmodium falciparum} SCOP: c.1.2.2
Probab=53.76 E-value=39 Score=29.27 Aligned_cols=42 Identities=12% Similarity=0.114 Sum_probs=27.3
Q ss_pred HHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 159 NQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 159 ~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+..++.++++++. ++.+.+..| ++.+.+..+.++|+|.+-.+
T Consensus 158 ~~~l~ki~~lr~~~~~~~I~VdGG-I~~~ti~~~~~aGAd~~V~G 201 (227)
T 1tqx_A 158 HDMMGKVSFLRKKYKNLNIQVDGG-LNIETTEISASHGANIIVAG 201 (227)
T ss_dssp GGGHHHHHHHHHHCTTCEEEEESS-CCHHHHHHHHHHTCCEEEES
T ss_pred hHHHHHHHHHHHhccCCeEEEECC-CCHHHHHHHHHcCCCEEEEe
Confidence 4445555555543 555655555 56788888888888877765
No 251
>3tqk_A Phospho-2-dehydro-3-deoxyheptonate aldolase; transferase; 2.30A {Francisella tularensis}
Probab=53.66 E-value=1.1e+02 Score=28.22 Aligned_cols=184 Identities=12% Similarity=0.075 Sum_probs=94.5
Q ss_pred CCCCHHHHHHhcCCC--hHHHHHHHHHHHHhhcCCCeeEEEEeeeecCCCCCcCCCCCCCCCCCCCCCcccCCCCHHHHH
Q 016599 51 HDWSKDDIKSIYDSP--VLDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCSEDCSYCPQSSRYDTGVKGQKLMTKDAVM 128 (386)
Q Consensus 51 ~~ls~ee~~~l~~~~--~~~~l~~aa~~~r~~~~g~~v~~~~~i~i~t~~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~ 128 (386)
.=.++++++..|-.+ ..+.+....+.++.-+.|..-.+..++- - |+.. +++.++
T Consensus 12 ~l~~P~~l~~~~Pls~~~~~~v~~~R~~i~~Il~G~d~rllVIaG----P-------CSie-------------d~eq~l 67 (346)
T 3tqk_A 12 VLIPAEVLIQDIPLLKTSFETVRKSRKEIANIIHGNDDRVAVVVG----P-------CSIH-------------DPAAAI 67 (346)
T ss_dssp CCCCHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHTSSCSEEEEEE----C-------SSCS-------------CHHHHH
T ss_pred cCCCHHHHHHhCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEe----c-------CccC-------------CHHHHH
Confidence 346678887765432 2344444445555555554433333222 2 5432 577888
Q ss_pred HHHHHHHHcCCc-----EEEEecc-cCC--CCC------Ch---------hhHHHHHHHHHHHhhcCcEEEEecCCCCHH
Q 016599 129 QAAQKAKEAGST-----RFCMGAA-WRD--TIG------RK---------TNFNQILEYVKDIRDMGMEVCCTLGMLEKH 185 (386)
Q Consensus 129 ~~~~~~~~~G~~-----~v~l~~g-~~~--~~g------e~---------~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e 185 (386)
+.++.++..+.+ .+++-++ +.| +.| .| ..++.+.+++..+.+.|+++.+.. ++..
T Consensus 68 eyA~~Lk~~~~~~~d~l~~vmR~y~~KPRTs~g~kGL~nDP~ld~s~~i~~GL~~~R~ll~~~~e~GLpiatE~--ld~~ 145 (346)
T 3tqk_A 68 EYATKLKEQVKKFHKDILIIMRVYFEKPRTTIGWKGFINDPDLDNSYNINKGLRLARNLLSDLTNMGLPCATEF--LDVI 145 (346)
T ss_dssp HHHHHHHHHHHHHTTTEEEEEECCCCCCCSSCSCCCTTTCTTSSSCCCHHHHHHHHHHHHHHHHHTTCCEEEEC--CSSS
T ss_pred HHHHHHHHHHhhhcccceEEeeecccCCCCCcCccccccCCCCCCCccHHHHHHHHHHHHHHHHhcCCCEEEEe--cCcC
Confidence 888877765421 2233222 111 011 11 123334444445567888875542 3333
Q ss_pred HHHHHHHhccCeeecccCch-HHHHhhhC------------CCCCHHHHHHHHHHHHHcCCee-----------------
Q 016599 186 QAIELKKAGLTAYNHNLDTS-REFYSKII------------TTRSYDERLETLKHVREAGINV----------------- 235 (386)
Q Consensus 186 ~l~~Lk~aG~~~v~i~le~~-~~~~~~i~------------~~~s~~~~l~~i~~a~~~Gi~v----------------- 235 (386)
..+.+.+. +++..|+..+. ...+..+. ...+.+.++++|..+..-.-.+
T Consensus 146 ~~qyv~dl-vs~~aIGARt~enq~hre~asg~s~PVg~Kngt~gti~~ai~Ai~aa~~pH~Fl~~~~~G~~aiv~T~GN~ 224 (346)
T 3tqk_A 146 TPQYFAEL-ITWGAIGARTVESQVHRELASGLSASIGFKNATNGDVQVAVDAVKSATYPHHFLSTTKSGSTAIFATKGNQ 224 (346)
T ss_dssp GGGGTGGG-CSEEEECGGGTTCHHHHHHHTTCSSEEEEECCTTCCSHHHHHHHHHHTSCCEEEEECTTSCEEEEECCCCS
T ss_pred CHHHHHHH-hheeeeCcccccCHHHHHHhcCCCCceEEeCCCCCchHHHhhHHHHHhCCceEEeeCCCCcEEEEECCCCC
Confidence 34444443 67777776665 33343332 1336888999988876532111
Q ss_pred eEeEEe-----ecCCCHHHHHHHHHHHhcCC
Q 016599 236 CSGGII-----GLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 236 ~~~~i~-----Glget~ed~~~~l~~l~~l~ 261 (386)
.+++|+ |.+.+.+++......+.+.+
T Consensus 225 ~~HvILRGg~~gpNY~~~~v~~a~~~l~k~~ 255 (346)
T 3tqk_A 225 NGHVILRGGASGPNFSKEHVDDCIAKLKKAD 255 (346)
T ss_dssp CEEEEECCCTTCCCCSHHHHHHHHHHHHHTT
T ss_pred CEEEEecCCCCCCCCCHHHHHHHHHHHHhCC
Confidence 222333 12335688888888887765
No 252
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=53.38 E-value=62 Score=30.12 Aligned_cols=73 Identities=11% Similarity=0.135 Sum_probs=34.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-cCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-LTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG-~~~v~i 200 (386)
+.++..+.++.+.+.|+.-+.+.++.... ..+.. .+.++.+++ ..+++..+.|. +.+.++.+.+.| +|.|.+
T Consensus 249 ~~~~~~~~a~~l~~~G~d~i~v~~~~~~~-~~~~~----~~~~~~v~~~~~iPvi~~Ggi-t~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 249 EEADALYLIEELAKRGIAYLHMSETDLAG-GKPYS----EAFRQKVRERFHGVIIGAGAY-TAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCBTTB-CCCCC----HHHHHHHHHHCCSEEEEESSC-CHHHHHHHHHTTSCSEEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEEecCcccC-CCccc----HHHHHHHHHHCCCCEEEECCc-CHHHHHHHHHCCCccEEEE
Confidence 44555555566656666655554321110 00111 123344442 34455444444 566666665555 666555
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
+
T Consensus 323 g 323 (364)
T 1vyr_A 323 G 323 (364)
T ss_dssp S
T ss_pred C
Confidence 3
No 253
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=53.31 E-value=78 Score=29.56 Aligned_cols=162 Identities=12% Similarity=0.034 Sum_probs=80.5
Q ss_pred CcEEEEecCC------CCHHHHHHHHHhc--cCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHH-----cCCeeeE
Q 016599 172 GMEVCCTLGM------LEKHQAIELKKAG--LTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVRE-----AGINVCS 237 (386)
Q Consensus 172 g~~i~~t~g~------l~~e~l~~Lk~aG--~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~-----~Gi~v~~ 237 (386)
+..+.++.|- ..++.++.++..+ +|.+.+++-.. ..-+..+.......+.+++++.+++ ..+++.+
T Consensus 146 ~~pv~vniggn~~t~~~~~dy~~~~~~~~~~ad~ielNisCPn~~G~~~l~~~~~l~~ll~av~~~~~~~~~~~~~Pv~v 225 (367)
T 3zwt_A 146 GLPLGVNLGKNKTSVDAAEDYAEGVRVLGPLADYLVVNVSSPNTAGLRSLQGKAELRRLLTKVLQERDGLRRVHRPAVLV 225 (367)
T ss_dssp TCCEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTSTTGGGGGSHHHHHHHHHHHHHHHHTSCGGGCCEEEE
T ss_pred CceEEEEEecCCCCCcCHHHHHHHHHHHhhhCCEEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHhhccccCCceEEE
Confidence 5555555443 1245555455543 78888777543 2111111111123344455544432 3455554
Q ss_pred eEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeee-cCCCC---C----CCCC-CCCHHHHHHHHHHHHHhCCCccee
Q 016599 238 GGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLA-VKGTP---L----QDQK-PVEIWEMIRMIATARIVMPKAMVR 308 (386)
Q Consensus 238 ~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P-~~gT~---l----~~~~-~~s~~e~~~~~a~~R~~lp~~~i~ 308 (386)
-+- .+.+.+++.++++.+.+.| ++.+.++.-.. .+++. + .... ++.....++++...+..++..+.-
T Consensus 226 Ki~--p~~~~~~~~~ia~~~~~aG--adgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ipv 301 (367)
T 3zwt_A 226 KIA--PDLTSQDKEDIASVVKELG--IDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVPI 301 (367)
T ss_dssp EEC--SCCCHHHHHHHHHHHHHHT--CCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSCE
T ss_pred EeC--CCCCHHHHHHHHHHHHHcC--CCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCceE
Confidence 443 3567789999999999887 77776643221 11110 1 1111 111222345566666666532222
Q ss_pred ecCcccccChhHHHhhhhcCccccccCCcc
Q 016599 309 LSAGRVRFSMPEQALCFLAGANSIFTGEKL 338 (386)
Q Consensus 309 i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~ 338 (386)
+..|-+. ..+.....+.+||+.++.|..+
T Consensus 302 I~~GGI~-s~~da~~~l~~GAd~V~vgra~ 330 (367)
T 3zwt_A 302 IGVGGVS-SGQDALEKIRAGASLVQLYTAL 330 (367)
T ss_dssp EEESSCC-SHHHHHHHHHHTCSEEEESHHH
T ss_pred EEECCCC-CHHHHHHHHHcCCCEEEECHHH
Confidence 3322222 2334466778999999777543
No 254
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=53.13 E-value=39 Score=31.52 Aligned_cols=43 Identities=16% Similarity=0.213 Sum_probs=30.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
....+.++.++.+++.|+.+..+.++ |+.=-+...+++...++
T Consensus 270 GGit~~~~i~~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~p 312 (368)
T 3q45_A 270 AGITNALNIIRLAEQAHMPVQVGGFL---ESRLGFTAAAHVALVSK 312 (368)
T ss_dssp TSHHHHHHHHHHHHHTTCCEEECCSS---CCHHHHHHHHHHHTTCT
T ss_pred CCHHHHHHHHHHHHHcCCcEEecCcc---ccHHHHHHHHHHHHcCC
Confidence 46888899999999999987665443 45445566667776653
No 255
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=52.98 E-value=1.1e+02 Score=30.14 Aligned_cols=94 Identities=14% Similarity=0.118 Sum_probs=60.0
Q ss_pred HHHHHHHHHcCCcEEEEecccCC-CCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHH-hccCeeecccCc
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRD-TIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKK-AGLTAYNHNLDT 204 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~-~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~-aG~~~v~i~le~ 204 (386)
.+.++.+.+.|+..+.+.+-... +...+ . +++++.+++ ..+++..+-|..+.+.++++.+ .|++.+.++=
T Consensus 455 ~e~a~~~~~~Ga~~il~t~~~~dG~~~G~-d----~~li~~l~~~~~iPVIasGGi~s~~d~~~~~~~~G~~gvivg~-- 527 (555)
T 1jvn_A 455 WELTRACEALGAGEILLNCIDKDGSNSGY-D----LELIEHVKDAVKIPVIASSGAGVPEHFEEAFLKTRADACLGAG-- 527 (555)
T ss_dssp HHHHHHHHHTTCCEEEECCGGGTTTCSCC-C----HHHHHHHHHHCSSCEEECSCCCSHHHHHHHHHHSCCSEEEESH--
T ss_pred HHHHHHHHHcCCCEEEEeCCCCCCCCCCC-C----HHHHHHHHHhCCccEEEECCCCCHHHHHHHHHhcCChHHHHHH--
Confidence 45566777899999987543211 11112 2 455555553 4788888888889999999987 7999887641
Q ss_pred hHHHHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 016599 205 SREFYSKIITTRSYDERLETLKHVREAGINVC 236 (386)
Q Consensus 205 ~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~ 236 (386)
.. ..+.-++.+.. +.+.+.|+.+.
T Consensus 528 --a~---~~~~~~~~e~~---~~l~~~gi~~r 551 (555)
T 1jvn_A 528 --MF---HRGEFTVNDVK---EYLLEHGLKVR 551 (555)
T ss_dssp --HH---HTTSCCHHHHH---HHHHHTTCCCC
T ss_pred --HH---HcCCCCHHHHH---HHHHHCCCccc
Confidence 11 22344666554 45677888754
No 256
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=52.85 E-value=93 Score=29.08 Aligned_cols=23 Identities=17% Similarity=0.164 Sum_probs=18.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEe
Q 016599 216 RSYDERLETLKHVREAGINVCSG 238 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~ 238 (386)
....+.++.++.+++.|+.+..+
T Consensus 274 GGit~a~~i~~~A~~~gi~~~~~ 296 (389)
T 2oz8_A 274 GQVTDVMRIGWLAAELGIPISIG 296 (389)
T ss_dssp SCHHHHHHHHHHHHHHTCCEEEC
T ss_pred cCHHHHHHHHHHHHHcCCeEeec
Confidence 56888888888888999886665
No 257
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=52.66 E-value=28 Score=32.88 Aligned_cols=80 Identities=10% Similarity=0.085 Sum_probs=44.7
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhhhCC------------CCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKIIT------------TRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~i~~------------~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.++.+++.- .+++.. |.. .+..+.+.. -....
T Consensus 232 ~~~~ai~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 309 (398)
T 2pp0_A 232 DRETAIRMGRKMEQFNLIWIEEPLDAYDIEGHAQLAAAL--DTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGIS 309 (398)
T ss_dssp CHHHHHHHHHHHGGGTCSCEECCSCTTCHHHHHHHHHHC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHH
T ss_pred CHHHHHHHHHHHHHcCCceeeCCCChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 456777788877776654 22112223566777776642 233321 221 122221111 13577
Q ss_pred HHHHHHHHHHHcCCeeeEe
Q 016599 220 ERLETLKHVREAGINVCSG 238 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~ 238 (386)
+.++.++.++++|+.+..+
T Consensus 310 e~~~i~~~A~~~gi~~~~h 328 (398)
T 2pp0_A 310 PFLKIMDLAAKHGRKLAPH 328 (398)
T ss_dssp HHHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHHcCCeEeec
Confidence 8889999999999986654
No 258
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=52.50 E-value=32 Score=32.21 Aligned_cols=35 Identities=9% Similarity=0.198 Sum_probs=17.2
Q ss_pred HHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHH
Q 016599 158 FNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKK 192 (386)
Q Consensus 158 ~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~ 192 (386)
.+...++++.+.+.|+. +.++.+....+.++.+++
T Consensus 241 ~~~~~~la~~l~~~Gvd~i~v~~~~~~~~~~~~ik~ 276 (362)
T 4ab4_A 241 AETFTYVARELGKRGIAFICSREREADDSIGPLIKE 276 (362)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCCCTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEECCCCCCHHHHHHHHH
Confidence 45566666666666655 344443322233444444
No 259
>3eoo_A Methylisocitrate lyase; seattle structural genomics center for infectious disease, ssgcid; 2.90A {Burkholderia pseudomallei 1655} SCOP: c.1.12.7
Probab=52.11 E-value=43 Score=30.43 Aligned_cols=68 Identities=15% Similarity=0.138 Sum_probs=37.3
Q ss_pred CCCHHHHHHHHHHHHHcC-CcEEEEecccCCCCCChhhHHHHHHHHHHHh---hcCcEEEEecCCCCHHHHHHHHHh
Q 016599 121 LMTKDAVMQAAQKAKEAG-STRFCMGAAWRDTIGRKTNFNQILEYVKDIR---DMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G-~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik---~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
..+.+|..+.++.+++.- -..+++.+=. + ....+.+-+.|++.+ +.|..+..-.+..+.+.++++.++
T Consensus 134 l~~~~e~~~ri~Aa~~A~~~~~~~I~ART-D----a~~~~gldeai~Ra~ay~~AGAD~if~~~~~~~ee~~~~~~~ 205 (298)
T 3eoo_A 134 CVPAGEMVDRIKAAVDARTDETFVIMART-D----AAAAEGIDAAIERAIAYVEAGADMIFPEAMKTLDDYRRFKEA 205 (298)
T ss_dssp BCCHHHHHHHHHHHHHHCSSTTSEEEEEE-C----THHHHHHHHHHHHHHHHHHTTCSEEEECCCCSHHHHHHHHHH
T ss_pred ecCHHHHHHHHHHHHHhccCCCeEEEEee-h----hhhhcCHHHHHHHHHhhHhcCCCEEEeCCCCCHHHHHHHHHH
Confidence 467888887777666531 1234443311 1 112233555555554 557775555566677777777664
No 260
>1sfl_A 3-dehydroquinate dehydratase; 3-dehydroquinase, enzyme turnover, shikimate pathway, lyase; 1.90A {Staphylococcus aureus subsp} SCOP: c.1.10.1 PDB: 1sfj_A*
Probab=51.98 E-value=1.2e+02 Score=26.31 Aligned_cols=152 Identities=8% Similarity=0.157 Sum_probs=84.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEec------CC--CCHH-HHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTL------GM--LEKH-QAIEL 190 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~------g~--l~~e-~l~~L 190 (386)
.+.+++++.++.+.+.|++-|-+--.. . +....+.+.+.++.+++. .+++..|. |. .+++ .++.+
T Consensus 14 ~~~~e~~~~~~~~~~~~~D~vElRvD~---l-~~~~~~~v~~~~~~lr~~~~~~PiI~T~R~~~eGG~~~~~~~~~~~ll 89 (238)
T 1sfl_A 14 LSIEETLIQKINHRIDAIDVLELRIDQ---F-ENVTVDQVAEMITKLKVMQDSFKLLVTYRTKLQGGYGQFTNDSYLNLI 89 (238)
T ss_dssp C---CHHHHHHHHTTTTCSEEEEECTT---S-TTCCHHHHHHHHHHHC---CCSEEEEECCBGGGTSCBCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHhhhcCCCEEEEEecc---c-ccCCHHHHHHHHHHHHHhccCCCEEEEeeccccCCCCCCCHHHHHHHH
Confidence 367888888888888888777653211 1 122467788888888753 56765553 32 3444 44444
Q ss_pred HHh----ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCee-eEeEEeecCCCHHHHHHHHHHHhcCCCCCC
Q 016599 191 KKA----GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINV-CSGGIIGLGEAEEDRVGLLHTLATLPTHPE 265 (386)
Q Consensus 191 k~a----G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v-~~~~i~Glget~ed~~~~l~~l~~l~~~~~ 265 (386)
+.+ +++.|-+-+... ..-+...+.++.+++.|.++ .+.--+.---+.+++...+..+.++| ++
T Consensus 90 ~~~~~~~~~d~iDvEl~~~----------~~~~~~~~l~~~~~~~~~kvI~S~Hdf~~tp~~~el~~~~~~~~~~g--aD 157 (238)
T 1sfl_A 90 SDLANINGIDMIDIEWQAD----------IDIEKHQRIITHLQQYNKEVIISHHNFESTPPLDELQFIFFKMQKFN--PE 157 (238)
T ss_dssp HHGGGCTTCCEEEEECCTT----------SCHHHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHTTC--CS
T ss_pred HHHHHhCCCCEEEEEccCC----------CChHHHHHHHHHHHhcCCEEEEEecCCCCCcCHHHHHHHHHHHHHcC--CC
Confidence 433 356666554331 01222335567778888873 33222211124589999999999997 66
Q ss_pred eEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 016599 266 SVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIV 301 (386)
Q Consensus 266 ~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~ 301 (386)
.+.+-.. + -+.++.+++......+
T Consensus 158 ivKia~~---a---------~~~~D~l~ll~~~~~~ 181 (238)
T 1sfl_A 158 YVKLAVM---P---------HNKNDVLNLLQAMSTF 181 (238)
T ss_dssp EEEEEEC---C---------SSHHHHHHHHHHHHHH
T ss_pred EEEEEec---C---------CCHHHHHHHHHHHHHH
Confidence 6655431 1 2466667776655443
No 261
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=51.96 E-value=65 Score=30.53 Aligned_cols=99 Identities=12% Similarity=0.043 Sum_probs=54.9
Q ss_pred hhHHHHHHHHHHHhhcCcE-EEEe-cCCCCHHHHHHHHHhccCeeecc----cCchHHHHhhh------------CCCCC
Q 016599 156 TNFNQILEYVKDIRDMGME-VCCT-LGMLEKHQAIELKKAGLTAYNHN----LDTSREFYSKI------------ITTRS 217 (386)
Q Consensus 156 ~~~~~l~~~i~~ik~~g~~-i~~t-~g~l~~e~l~~Lk~aG~~~v~i~----le~~~~~~~~i------------~~~~s 217 (386)
...++..++++.+.+.++. +.-. ...-+.+.++++++.- .+++. +.+..+..+.+ .+-..
T Consensus 224 ~~~~~A~~~~~~L~~~~i~~iEqP~~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GG 301 (410)
T 3dip_A 224 WGTHAAARICNALADYGVLWVEDPIAKMDNIPAVADLRRQT--RAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGG 301 (410)
T ss_dssp BCHHHHHHHHHHGGGGTCSEEECCBSCTTCHHHHHHHHHHH--CCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSC
T ss_pred CCHHHHHHHHHHHHhcCCCEEECCCCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccCC
Confidence 3457777788888777665 2222 1223567777776641 23332 22221211111 11235
Q ss_pred HHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 218 YDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 218 ~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
..+.++....+.+.|+.+..+.. +.=-+...+.+...++
T Consensus 302 it~~~~ia~~A~~~gi~~~~h~~-----s~i~~aa~~hlaaa~p 340 (410)
T 3dip_A 302 LSEGRKIAALAETHARPLAPHXT-----GPVALMAGLHLALHAP 340 (410)
T ss_dssp HHHHHHHHHHHHHTTCCEEECSS-----CHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHHcCCEEeeeCc-----cHHHHHHHHHHHHhCC
Confidence 88889999999999998766543 2223445566666553
No 262
>1w8s_A FBP aldolase, fructose-bisphosphate aldolase class I; TIM barrel, glycolytic, archaeal, catalytic mechanism, reaction intermediate, lyase; HET: FBP; 1.85A {Thermoproteus tenax} SCOP: c.1.10.1 PDB: 1w8r_A* 2yce_A* 1ojx_A 1ok4_A 1ok6_A
Probab=51.93 E-value=1.1e+02 Score=26.94 Aligned_cols=72 Identities=8% Similarity=-0.025 Sum_probs=37.0
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCC--------CCHHHHH----HHHHhccCe
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM--------LEKHQAI----ELKKAGLTA 197 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~--------l~~e~l~----~Lk~aG~~~ 197 (386)
.++++.+.|++.+-+.--.. .......++++.++.+..++.++.+.++... .+.+.+. ...++|.|.
T Consensus 97 ~ve~Ai~~Ga~~v~~~~nig-~~~~~~~~~~~~~v~~~~~~~~~~vIi~~~~~G~~~~~~~s~~~i~~a~~~a~~~GAD~ 175 (263)
T 1w8s_A 97 SVEEAVSLGASAVGYTIYPG-SGFEWKMFEELARIKRDAVKFDLPLVVESFPRGGKVVNETAPEIVAYAARIALELGADA 175 (263)
T ss_dssp CHHHHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHHHTCCEEEEECCCSTTCCCTTCHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHCCCCEEEEEEecC-CcCHHHHHHHHHHHHHHHHHcCCeEEEEeeCCCCccccCCCHHHHHHHHHHHHHcCCCE
Confidence 34455678999887653100 0011123334444444444567775444322 1444443 346779999
Q ss_pred eeccc
Q 016599 198 YNHNL 202 (386)
Q Consensus 198 v~i~l 202 (386)
|-.+.
T Consensus 176 vkt~~ 180 (263)
T 1w8s_A 176 MKIKY 180 (263)
T ss_dssp EEEEC
T ss_pred EEEcC
Confidence 88763
No 263
>1vcv_A Probable deoxyribose-phosphate aldolase; DERA, hyperthermophIle, archaea, lyase; 2.00A {Pyrobaculum aerophilum} SCOP: c.1.10.1
Probab=51.82 E-value=1e+02 Score=26.68 Aligned_cols=73 Identities=15% Similarity=0.207 Sum_probs=48.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC---------CCCChhhHHHHHHHHHHHhhcC--cEEEEecCCCCHHHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD---------TIGRKTNFNQILEYVKDIRDMG--MEVCCTLGMLEKHQAIEL 190 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~---------~~ge~~~~~~l~~~i~~ik~~g--~~i~~t~g~l~~e~l~~L 190 (386)
++.+++...++.+.+.|.+-|--.+|..+ +.| ...+++.-+-+.+++.+ +.+-..-|..+.+.+..|
T Consensus 125 Lt~eei~~a~~ia~eaGADfVKTSTGf~~~~~~~~~~~~~g--At~~dv~lm~~~i~~~g~~v~vKaaGGirt~~~al~~ 202 (226)
T 1vcv_A 125 LRDEERYTLYDIIAEAGAHFIKSSTGFAEEAYAARQGNPVH--STPERAAAIARYIKEKGYRLGVKMAGGIRTREQAKAI 202 (226)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECCCSCCCHHHHHHTTCCSS--CCHHHHHHHHHHHHHHTCCCEEEEESSCCSHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCccccccccCCCCC--CCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHH
Confidence 46889999999999999987766555430 222 22333322223333333 566677888889999999
Q ss_pred HHh---ccC
Q 016599 191 KKA---GLT 196 (386)
Q Consensus 191 k~a---G~~ 196 (386)
.++ |.+
T Consensus 203 i~a~~~Ga~ 211 (226)
T 1vcv_A 203 VDAIGWGED 211 (226)
T ss_dssp HHHHCSCSC
T ss_pred HHHHHCCCC
Confidence 999 988
No 264
>1uas_A Alpha-galactosidase; TIM-barrel, beta-alpha-barrel, greek KEY motif, hydrolase; HET: GLA; 1.50A {Oryza sativa} SCOP: b.71.1.1 c.1.8.1
Probab=51.54 E-value=48 Score=30.81 Aligned_cols=81 Identities=14% Similarity=0.312 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHH-----HHcCCcEEEEecccCC----CCCC----hhhHHH-HHHHHHHHhhcCcE--EEEecCC----
Q 016599 122 MTKDAVMQAAQKA-----KEAGSTRFCMGAAWRD----TIGR----KTNFNQ-ILEYVKDIRDMGME--VCCTLGM---- 181 (386)
Q Consensus 122 ~s~eeI~~~~~~~-----~~~G~~~v~l~~g~~~----~~ge----~~~~~~-l~~~i~~ik~~g~~--i~~t~g~---- 181 (386)
.+.+.+.+.++.+ .+.|+..|+|-.||.. ..|. +..|+. +..+++.+++.|+. +....|.
T Consensus 23 ~~e~~i~~~ad~~~~~gl~~~G~~~v~iDdgW~~~~rd~~G~~~~~~~~FP~Gl~~l~~~ih~~Glk~Giw~~~~~~~~~ 102 (362)
T 1uas_A 23 INEQIIRETADALVNTGLAKLGYQYVNIDDCWAEYSRDSQGNFVPNRQTFPSGIKALADYVHAKGLKLGIYSDAGSQTCS 102 (362)
T ss_dssp CCHHHHHHHHHHHHHTSHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTCTTCHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCchhcCCcEEEECCCcCCCCCCCCCCeeEChhccCccHHHHHHHHHHCCCEeEEEeeCCCcccc
Confidence 5788999999988 7778888877655532 1121 122333 78888888888877 3444432
Q ss_pred ------C--CHHHHHHHHHhccCeeeccc
Q 016599 182 ------L--EKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 182 ------l--~~e~l~~Lk~aG~~~v~i~l 202 (386)
. .+..++.+++.|+|.|-+..
T Consensus 103 ~~~pg~~~~~~~~~~~~~~wGvdyvK~D~ 131 (362)
T 1uas_A 103 NKMPGSLDHEEQDVKTFASWGVDYLKYDN 131 (362)
T ss_dssp SSSBCCTTCHHHHHHHHHHHTCCEEEEEC
T ss_pred CCCCCchhHHHHHHHHHHHcCCCEEEECc
Confidence 1 25678888999999988754
No 265
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=51.50 E-value=65 Score=30.06 Aligned_cols=70 Identities=10% Similarity=0.149 Sum_probs=44.2
Q ss_pred HHHHHHcCCcEEEEeccc-CCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAW-RDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~-~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.|.+.+++ +...+.+..++.+.++.+.+.. .+++..+-|..+.+.+.+....|++.|.++
T Consensus 243 a~~a~~~Gad~I~vs~~ggr~~~~g~~~~~~l~~v~~~v~~-~ipVia~GGI~~g~D~~kalalGAd~V~iG 313 (368)
T 2nli_A 243 ADMAIKRGASGIWVSNHGARQLYEAPGSFDTLPAIAERVNK-RVPIVFDSGVRRGEHVAKALASGADVVALG 313 (368)
T ss_dssp HHHHHHTTCSEEEECCGGGTSCSSCCCHHHHHHHHHHHHTT-SSCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEEcCCCcCCCCCCCChHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 345567788888885432 2222223344444444444321 478888888888777777777999999886
No 266
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=51.39 E-value=34 Score=32.34 Aligned_cols=41 Identities=12% Similarity=0.050 Sum_probs=30.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
...+.++.++.+++.|+.+..+ ..++.-.+...+.+...++
T Consensus 283 Git~~~~i~~~A~~~g~~~~~h----~~es~i~~~a~~hlaaa~~ 323 (401)
T 2hzg_A 283 GLGPAKRVADAAQARGITYVNH----TFTSHLALSASLQPFAGLE 323 (401)
T ss_dssp SHHHHHHHHHHHHHHTCEEEEC----CCSCHHHHHHHHGGGTTCT
T ss_pred CHHHHHHHHHHHHHcCCEEecC----CCCcHHHHHHHHHHHHhCC
Confidence 5788889999999999986655 3467666666677766664
No 267
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=51.32 E-value=39 Score=32.20 Aligned_cols=82 Identities=11% Similarity=0.041 Sum_probs=44.9
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhh-------hCC----CCCHHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSK-------IIT----TRSYDE 220 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~-------i~~----~~s~~~ 220 (386)
..++..++++.+.+.++.. .-....-+.+.++.|++.--..+.+.. |+ ..+..+. +.. -....+
T Consensus 234 ~~~~Ai~~~~~l~~~~i~~iEqPl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~~d~i~ik~~~~GGite 313 (415)
T 2p3z_A 234 DVNYATKLAHACAPFNLKWIEECLPPQQYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETGIDIMQPDVGWCGGLTT 313 (415)
T ss_dssp CHHHHHHHHHHHGGGTCCEEECCSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTTCSEECCCHHHHTCHHH
T ss_pred CHHHHHHHHHHHhhcCCceEeCCCCcchHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcCCCEEEeCccccCCHHH
Confidence 4577777888877766642 211222356667777654111134322 21 1122211 111 135788
Q ss_pred HHHHHHHHHHcCCeeeEe
Q 016599 221 RLETLKHVREAGINVCSG 238 (386)
Q Consensus 221 ~l~~i~~a~~~Gi~v~~~ 238 (386)
.++.++.++++|+.+..+
T Consensus 314 a~~ia~lA~~~gi~v~~h 331 (415)
T 2p3z_A 314 LVEIAALAKSRGQLVVPH 331 (415)
T ss_dssp HHHHHHHHHHTTCCBCCC
T ss_pred HHHHHHHHHHcCCEEEec
Confidence 889999999999986554
No 268
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=51.23 E-value=17 Score=31.51 Aligned_cols=73 Identities=14% Similarity=0.072 Sum_probs=47.8
Q ss_pred HHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecccC
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLD 203 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le 203 (386)
..+.++.+.+.|++.+.+..-.....+.. ..++.++.+++.++++....|..+.+.++.+.++|++.+.++-.
T Consensus 32 ~~~~a~~~~~~Gad~i~v~d~~~~~~~~~----~~~~~i~~i~~~~ipvi~~Ggi~~~~~~~~~~~~Gad~V~lg~~ 104 (241)
T 1qo2_A 32 PVELVEKLIEEGFTLIHVVDLSNAIENSG----ENLPVLEKLSEFAEHIQIGGGIRSLDYAEKLRKLGYRRQIVSSK 104 (241)
T ss_dssp HHHHHHHHHHTTCCCEEEEEHHHHHHCCC----TTHHHHHHGGGGGGGEEEESSCCSHHHHHHHHHTTCCEEEECHH
T ss_pred HHHHHHHHHHcCCCEEEEecccccccCCc----hhHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHCCCCEEEECch
Confidence 34555666778998887753110000111 12455666653467788888889999999999999999987543
No 269
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=51.22 E-value=75 Score=28.77 Aligned_cols=97 Identities=9% Similarity=0.026 Sum_probs=58.0
Q ss_pred hhhHHHHHHHHHHHhhcCcEE---EEecCC---CCHHHHHHHHHhccC----eeecccCchHHHHhhhCCCCCHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEV---CCTLGM---LEKHQAIELKKAGLT----AYNHNLDTSREFYSKIITTRSYDERLET 224 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i---~~t~g~---l~~e~l~~Lk~aG~~----~v~i~le~~~~~~~~i~~~~s~~~~l~~ 224 (386)
..+++.+.++++.+-+.|+.- +-|.|. ++.+.-+++.+.-++ ++.+=+ . ....+.++.++.
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia--------G-vg~~~t~~ai~l 101 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA--------G-SGCESTQATVEM 101 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE--------E-CCCSSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE--------e-cCCCCHHHHHHH
Confidence 367788888888887777763 233442 565555544443222 222100 0 023478888888
Q ss_pred HHHHHHcCCeeeEeE-Eeec--CCCHHHHHHHHHHHhcC
Q 016599 225 LKHVREAGINVCSGG-IIGL--GEAEEDRVGLLHTLATL 260 (386)
Q Consensus 225 i~~a~~~Gi~v~~~~-i~Gl--get~ed~~~~l~~l~~l 260 (386)
.+.+.++|..--.-+ -+-. .-+.+++.++++.+.+-
T Consensus 102 a~~A~~~Gadavlv~~P~y~~~~~s~~~l~~~f~~ia~a 140 (307)
T 3s5o_A 102 TVSMAQVGADAAMVVTPCYYRGRMSSAALIHHYTKVADL 140 (307)
T ss_dssp HHHHHHTTCSEEEEECCCTTGGGCCHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCCEEEEcCCCcCCCCCCHHHHHHHHHHHHhh
Confidence 999999998632222 2211 15889999999888654
No 270
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=50.95 E-value=74 Score=30.35 Aligned_cols=116 Identities=13% Similarity=0.118 Sum_probs=70.7
Q ss_pred CCHHHHHHHHHHHHH-cCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec-CCCCHHHHHHHHHhc-cCee
Q 016599 122 MTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL-GMLEKHQAIELKKAG-LTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~-~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~-g~l~~e~l~~Lk~aG-~~~v 198 (386)
.++++.++.++.+.+ .++. .+ ..|.. +..++.+.++-+.+. ..++++..- -..+.+.++.+.+.| ++.+
T Consensus 267 ~t~~~ai~~~~~L~~~~~i~--~i----EePl~-~~d~~~~~~l~~~~~-~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i 338 (431)
T 2fym_A 267 FTSEEFTHFLEELTKQYPIV--SI----EDGLD-ESDWDGFAYQTKVLG-DKIQLVGDDLFVTNTKILKEGIEKGIANSI 338 (431)
T ss_dssp ECHHHHHHHHHHHHHHSCEE--EE----ESCSC-TTCHHHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CCHHHHHHHHHHHHHhCCce--EE----ECCCC-cccHHHHHHHHHHhC-CCCeEEeCCcccCCHHHHHHHHHhCCCCEE
Confidence 578999998888877 6642 22 22221 223444433333221 156776544 446778888887765 6777
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHH
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTL 257 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l 257 (386)
.+.+ .+-....+.++.++.++++|+.+.++-+. |||......++...
T Consensus 339 ~ik~----------~~~GGite~~~i~~~A~~~g~~~~~~h~~--get~~~~~a~la~a 385 (431)
T 2fym_A 339 LIKF----------NQIGSLTETLAAIKMAKDAGYTAVISHRS--GETEDATIADLAVG 385 (431)
T ss_dssp EECG----------GGTCSHHHHHHHHHHHHHTTCEEEEECCS--SCCSCCHHHHHHHH
T ss_pred EECc----------cccCCHHHHHHHHHHHHHCCCeEEEeCCC--CCchHHHHHHHHHh
Confidence 7743 34567889999999999999987554443 35544444454444
No 271
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=50.72 E-value=68 Score=28.24 Aligned_cols=79 Identities=16% Similarity=0.167 Sum_probs=46.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC----------------------CCCChhh-H-HHHHHHHHHHhhc-CcEEE
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD----------------------TIGRKTN-F-NQILEYVKDIRDM-GMEVC 176 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~----------------------~~ge~~~-~-~~l~~~i~~ik~~-g~~i~ 176 (386)
++.+++.+.++.+.+.|...+.+.....+ ..|.... - +.+.+.++.+++. ++++.
T Consensus 131 l~~ee~~~~~~~~~~~gl~~i~l~~p~t~~~rl~~ia~~a~gfiy~vs~~g~TG~~~~~~~~~~~~~v~~vr~~~~~pv~ 210 (262)
T 2ekc_A 131 LPPEEAEELKAVMKKYVLSFVPLGAPTSTRKRIKLICEAADEMTYFVSVTGTTGAREKLPYERIKKKVEEYRELCDKPVV 210 (262)
T ss_dssp CCHHHHHHHHHHHHHTTCEECCEECTTCCHHHHHHHHHHCSSCEEEESSCC---------CHHHHHHHHHHHHHCCSCEE
T ss_pred CCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHhCCCCEEEEecCCccCCCCCcCcccHHHHHHHHHhhcCCCEE
Confidence 56778777777777777654444331100 1111111 1 3455777777753 56677
Q ss_pred EecCCCCHHHHHHHHHhccCeeecc
Q 016599 177 CTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 177 ~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+..|..+.+.++.+ .+|.|.+-++
T Consensus 211 vG~GI~t~e~~~~~-~~gADgvIVG 234 (262)
T 2ekc_A 211 VGFGVSKKEHAREI-GSFADGVVVG 234 (262)
T ss_dssp EESSCCSHHHHHHH-HTTSSEEEEC
T ss_pred EeCCCCCHHHHHHH-HcCCCEEEEC
Confidence 77787788888884 5678887765
No 272
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=50.67 E-value=73 Score=29.40 Aligned_cols=101 Identities=11% Similarity=0.049 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHhhcCcEEEEe-cCCCCHHHHHHHHHhccCeeeccc----CchHHHHhhhC------------CCCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEVCCT-LGMLEKHQAIELKKAGLTAYNHNL----DTSREFYSKII------------TTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~l----e~~~~~~~~i~------------~~~s~~ 219 (386)
..++..++++.+.+.++...-. ...-+.+.+++|++.- .+++.. .+..+..+.+. +-....
T Consensus 195 ~~~~a~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit 272 (354)
T 3jva_A 195 TPKDAVKAIQALADYQIELVEQPVKRRDLEGLKYVTSQV--NTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIH 272 (354)
T ss_dssp CHHHHHHHHHHTTTSCEEEEECCSCTTCHHHHHHHHHHC--SSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHHhC--CCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHH
Confidence 4466677777777666542111 1122456666666541 233322 12212222111 113578
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++..+.++++|+.+..+.++ ||+.--+...+.+...++
T Consensus 273 ~~~~i~~~A~~~gi~~~~~~~~--~es~i~~~a~~hlaaa~~ 312 (354)
T 3jva_A 273 EALKINQICETAGIECMIGCMA--EETTIGITAAAHLAAAQK 312 (354)
T ss_dssp HHHHHHHHHHHTTCEEEECCCT--TCCHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEEecCCC--cccHHHHHHHHHHHhcCC
Confidence 8899999999999997665543 367666777777777664
No 273
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=50.66 E-value=29 Score=32.85 Aligned_cols=99 Identities=10% Similarity=0.010 Sum_probs=54.5
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhhh------------CCCCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKI------------ITTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~i------------~~~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.++++++.- .+++.. |.. .+..+.+ .+-....
T Consensus 227 ~~~~a~~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 304 (407)
T 2o56_A 227 DTTSAIQFGRMIEELGIFYYEEPVMPLNPAQMKQVADKV--NIPLAAGERIYWRWGYRPFLENGSLSVIQPDICTCGGIT 304 (407)
T ss_dssp CHHHHHHHHHHHGGGCCSCEECSSCSSSHHHHHHHHHHC--CSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEeCCCChhhHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 457777888888777664 22112223567777777652 233322 222 1122111 1123577
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.+++.|+.+..+.+. +.=-....+.+...++
T Consensus 305 e~~~i~~~A~~~g~~~~~h~~~----s~i~~aa~~hlaaa~~ 342 (407)
T 2o56_A 305 EVKKICDMAHVYDKTVQIHVCG----GPISTAVALHMETAIP 342 (407)
T ss_dssp HHHHHHHHHHTTTCEECCCCCS----CHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEeecCCC----CHHHHHHHHHHHHhCC
Confidence 8888889999999986665442 3333455556665553
No 274
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=50.56 E-value=31 Score=32.62 Aligned_cols=99 Identities=10% Similarity=0.080 Sum_probs=55.2
Q ss_pred hHHHHHHHHHHHhhcCcEEEEe-cCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhhh--------C----CCCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEVCCT-LGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSKI--------I----TTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~i--------~----~~~s~~ 219 (386)
..++..++++.+.+.++...-. ...-+.+.++++++.- .+++.. |. ..+..+.+ . +-....
T Consensus 230 ~~~~ai~~~~~l~~~~i~~iE~P~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 307 (410)
T 2gl5_A 230 GTNSAIQFAKAIEKYRIFLYEEPIHPLNSDNMQKVSRST--TIPIATGERSYTRWGYRELLEKQSIAVAQPDLCLCGGIT 307 (410)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECSSCSSCHHHHHHHHHHC--SSCEEECTTCCTTHHHHHHHHTTCCSEECCCTTTTTHHH
T ss_pred CHHHHHHHHHHHHhcCCCeEECCCChhhHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4577778888887777653211 2224567777777652 233311 21 11222111 1 122578
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.+++.|+.+..+.+ ++.=-....+.+...++
T Consensus 308 ~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~~ 345 (410)
T 2gl5_A 308 EGKKICDYANIYDTTVQVHVC----GGPVSTVAALHMETAIP 345 (410)
T ss_dssp HHHHHHHHHHTTTCEECCCCC----SSHHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHcCCeEeecCC----CCHHHHHHHHHHHHhCC
Confidence 888999999999998666544 24334455566666663
No 275
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=50.33 E-value=32 Score=32.53 Aligned_cols=127 Identities=10% Similarity=0.047 Sum_probs=66.8
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChh-hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKT-NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~-~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
++++-++.++.+++ .|-. .+.+-. + ... ..++..++++.+.+.++.. .-....-+.+.++.+++.- .+
T Consensus 187 ~~~~d~e~v~avR~a~G~d~~l~vDa--N----~~~~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~--~i 258 (394)
T 3mkc_A 187 STKEVAYYLRELRGILGHDTDMMVDY--L----YRFTDWYEVARLLNSIEDLELYFAEATLQHDDLSGHAKLVENT--RS 258 (394)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEEC--T----TCCCCHHHHHHHHHHTGGGCCSEEESCSCTTCHHHHHHHHHHC--SS
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEeC--C----CCCCCHHHHHHHHHHhhhcCCeEEECCCCchhHHHHHHHHhhC--CC
Confidence 56666666666554 3432 233311 1 113 4577778888887776652 2111223566677776641 23
Q ss_pred eccc-Cch---HHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 199 NHNL-DTS---REFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 199 ~i~l-e~~---~~~~~~i~------------~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
++.. |+. .+..+.+. +-....+.++....+...|+.+..+.+ ++.=-....+.+...++
T Consensus 259 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~----~s~i~~aa~~hlaaa~p 333 (394)
T 3mkc_A 259 RICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRRITEMATANNVQVMPHNW----KTGITSAAAIHYQFAVG 333 (394)
T ss_dssp CBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEECCCCC----SCHHHHHHHHHHHHHTC
T ss_pred CEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEeecCC----CcHHHHHHHHHHHHhCC
Confidence 3322 221 11111111 112478888889999999998766542 34434455566665553
No 276
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=50.23 E-value=37 Score=34.40 Aligned_cols=81 Identities=14% Similarity=0.163 Sum_probs=55.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCC----CChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhc-c
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTI----GRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAG-L 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~----ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG-~ 195 (386)
.+.++..+.++.+.+.|+..+.+.+++.... ..........+.++.+++ ..+++..+.|..+.+.++.+.+.| +
T Consensus 225 ~~~~~~~~~a~~l~~~g~d~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~a~~~l~~g~a 304 (671)
T 1ps9_A 225 GTFAETVELAQAIEAAGATIINTGIGWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQVADDILSRGDA 304 (671)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEEECBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHHHHHHHHTTSC
T ss_pred CCHHHHHHHHHHHHhcCCCEEEcCCCccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHHHHHHHHcCCC
Confidence 4778888889999899999888765432110 000001123566777774 467777766667899999998888 9
Q ss_pred Ceeeccc
Q 016599 196 TAYNHNL 202 (386)
Q Consensus 196 ~~v~i~l 202 (386)
|.|.++=
T Consensus 305 D~V~~gR 311 (671)
T 1ps9_A 305 DMVSMAR 311 (671)
T ss_dssp SEEEEST
T ss_pred CEEEeCH
Confidence 9988753
No 277
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=50.15 E-value=55 Score=30.61 Aligned_cols=99 Identities=12% Similarity=0.125 Sum_probs=55.5
Q ss_pred hHHHHHHHHHHHhhc-CcEEEEe-cCCCCHHHHHHHHHhccCeeeccc-C---chHHHHhhh------------CCCCCH
Q 016599 157 NFNQILEYVKDIRDM-GMEVCCT-LGMLEKHQAIELKKAGLTAYNHNL-D---TSREFYSKI------------ITTRSY 218 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~-g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~l-e---~~~~~~~~i------------~~~~s~ 218 (386)
..++..++++.+.+. ++...-. ...-+.+.++++++.- .+++.. | +.....+.+ .+-...
T Consensus 196 ~~~~a~~~~~~l~~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 273 (382)
T 2gdq_A 196 DAAAAFKWERYFSEWTNIGWLEEPLPFDQPQDYAMLRSRL--SVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGI 273 (382)
T ss_dssp CHHHHHTTHHHHTTCSCEEEEECCSCSSCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHH
T ss_pred CHHHHHHHHHHHhhccCCeEEECCCCcccHHHHHHHHhhC--CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCH
Confidence 456677777777777 6652211 1223566666666541 233311 2 211111111 112357
Q ss_pred HHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 219 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
.+.++.++.+++.|+.+..+ + .++.--+...+.+...++
T Consensus 274 t~~~~i~~~A~~~g~~~~~~-~---~es~i~~~a~l~laa~~~ 312 (382)
T 2gdq_A 274 DEFRDCLQLARYFGVRASAH-A---YDGSLSRLYALFAQACLP 312 (382)
T ss_dssp HHHHHHHHHHHHHTCEECCC-C---SSCSHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHHcCCEEeec-C---CCcHHHHHHHHHHHHhCc
Confidence 88899999999999987776 3 345445566667766653
No 278
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=50.03 E-value=1.4e+02 Score=26.53 Aligned_cols=79 Identities=15% Similarity=0.021 Sum_probs=48.0
Q ss_pred cCCCCHHHHHHHHHHHHHcCCcEEEEecc-------------------cCCCC-CCh-hhHHHHHHHHHHHhh-cCcEEE
Q 016599 119 QKLMTKDAVMQAAQKAKEAGSTRFCMGAA-------------------WRDTI-GRK-TNFNQILEYVKDIRD-MGMEVC 176 (386)
Q Consensus 119 ~~~~s~eeI~~~~~~~~~~G~~~v~l~~g-------------------~~~~~-ge~-~~~~~l~~~i~~ik~-~g~~i~ 176 (386)
+..-++.+.++.++.+.+.|++.+..... +.+.+ |.. .. .++|+.+++ .++++.
T Consensus 116 ~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~pIGsG~Gi~~----~~lI~~I~e~~~vPVI 191 (265)
T 1wv2_A 116 TLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAGLIGSGLGICN----PYNLRIILEEAKVPVL 191 (265)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSSSTTCCCCCSC----HHHHHHHHHHCSSCBE
T ss_pred ccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCccCCCCCCcCC----HHHHHHHHhcCCCCEE
Confidence 33457788888888888888866532210 01111 101 12 233344443 356776
Q ss_pred EecCCCCHHHHHHHHHhccCeeecc
Q 016599 177 CTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 177 ~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+..|.-+++.+....+.|++.|.++
T Consensus 192 ~eGGI~TPsDAa~AmeLGAdgVlVg 216 (265)
T 1wv2_A 192 VDAGVGTASDAAIAMELGCEAVLMN 216 (265)
T ss_dssp EESCCCSHHHHHHHHHHTCSEEEES
T ss_pred EeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 7778888888888888898888774
No 279
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=50.00 E-value=41 Score=29.98 Aligned_cols=43 Identities=16% Similarity=0.163 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 159 NQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 159 ~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+.+.++++++|+. .+++.+-.|..+++.++....+|.|.+-++
T Consensus 192 ~~~~~~v~~vr~~~~~pv~vGfGI~~~e~~~~~~~~gADgvVVG 235 (267)
T 3vnd_A 192 EPIENILTQLAEFNAPPPLLGFGIAEPEQVRAAIKAGAAGAISG 235 (267)
T ss_dssp -CHHHHHHHHHTTTCCCEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHHHhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 4466777777754 556777777778888887777788887775
No 280
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=50.00 E-value=52 Score=31.27 Aligned_cols=99 Identities=5% Similarity=-0.070 Sum_probs=53.4
Q ss_pred hhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-Cch--H-HHHhhh------------CCCCCH
Q 016599 156 TNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-DTS--R-EFYSKI------------ITTRSY 218 (386)
Q Consensus 156 ~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~--~-~~~~~i------------~~~~s~ 218 (386)
...++..++++.+.+.++.. .-....-+.+.++++++.- .+++.. |+. . +..+.+ .+-...
T Consensus 212 ~~~~~A~~~~~~L~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGi 289 (412)
T 4e4u_A 212 MVPSSAIRLAKRLEKYDPLWFEEPVPPGQEEAIAQVAKHT--SIPIATGERLTTKYEFHKLLQAGGASILQLNVARVGGL 289 (412)
T ss_dssp BCHHHHHHHHHHHGGGCCSEEECCSCSSCHHHHHHHHHTC--SSCEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTSH
T ss_pred CCHHHHHHHHHHhhhcCCcEEECCCChhhHHHHHHHHhhC--CCCEEecCccCCHHHHHHHHHcCCCCEEEeCccccCCH
Confidence 34577778888887776542 2111223567777777641 233322 221 1 111111 112357
Q ss_pred HHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 219 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.++....+...|+.+..+.. ++.=-+...+++...+
T Consensus 290 t~~~kia~~A~~~gi~v~~h~~----~s~i~~aa~~hlaaa~ 327 (412)
T 4e4u_A 290 LEAKKIATLAEVHYAQIAPHLY----NGPVGAAASIQLATCT 327 (412)
T ss_dssp HHHHHHHHHHHHTTCEECCCCC----SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCEEEecCC----CcHHHHHHHHHHHHhC
Confidence 7888888888889988766532 2333344555666555
No 281
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=49.91 E-value=1.4e+02 Score=26.58 Aligned_cols=207 Identities=15% Similarity=0.139 Sum_probs=108.7
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCC---ChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIG---RKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~g---e~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+.+...+.++.+++.|.+-+.++.--..+.. .....+.+..+.+..++.|+++.++. .+.+.++.+.+. ++.+.
T Consensus 50 ~~e~a~~~a~~~k~~ga~~~k~~~~kprts~~~f~g~g~~gl~~l~~~~~~~Gl~~~te~--~d~~~~~~l~~~-vd~~k 126 (276)
T 1vs1_A 50 SWEQVREAALAVKEAGAHMLRGGAFKPRTSPYSFQGLGLEGLKLLRRAGDEAGLPVVTEV--LDPRHVETVSRY-ADMLQ 126 (276)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECBSSCCCSSTTSCCCCTHHHHHHHHHHHHHHTCCEEEEC--CCGGGHHHHHHH-CSEEE
T ss_pred CHHHHHHHHHHHHHhCCCEEEeEEEeCCCChhhhcCCCHHHHHHHHHHHHHcCCcEEEec--CCHHHHHHHHHh-CCeEE
Confidence 7889999999999999876654421111100 00123344333333457899987764 567888888888 89988
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeee-eeeecCCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPIN-ALLAVKGT 278 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~-~f~P~~gT 278 (386)
|+--.. .++ ..++.+.+.|.+|.. =-|..-|.+|+...++.+..-| +.+.+-+. -..-+|+.
T Consensus 127 Igs~~~----------~n~----~ll~~~a~~~kPV~l--k~G~~~t~~ei~~Ave~i~~~G-n~~i~L~~Rg~~~yp~y 189 (276)
T 1vs1_A 127 IGARNM----------QNF----PLLREVGRSGKPVLL--KRGFGNTVEELLAAAEYILLEG-NWQVVLVERGIRTFEPS 189 (276)
T ss_dssp ECGGGT----------TCH----HHHHHHHHHTCCEEE--ECCTTCCHHHHHHHHHHHHHTT-CCCEEEEECCBCCSCCS
T ss_pred ECcccc----------cCH----HHHHHHHccCCeEEE--cCCCCCCHHHHHHHHHHHHHcC-CCeEEEEeCCcCCCCCc
Confidence 864332 111 233444455665332 2233348899999999998887 33322222 11112221
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhCCCccee-ec--CcccccChhHHHhhhhcCccccccCCcc-----c--cCCCCChhH
Q 016599 279 PLQDQKPVEIWEMIRMIATARIVMPKAMVR-LS--AGRVRFSMPEQALCFLAGANSIFTGEKL-----L--TTPNNDFDA 348 (386)
Q Consensus 279 ~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~-i~--~g~~~~~~~~~~~~l~~Gan~~~~g~~~-----~--t~~~~~~~~ 348 (386)
+. ..++ ++.+...+..+.-..+- .+ .|.-.+.......+...||+.+|.+.-+ + .....++++
T Consensus 190 ~~---~~vd----l~~i~~lk~~~~lpVi~dssH~~g~~~~~~~~~~aAva~Ga~Gl~IE~H~~~d~a~~D~~~sl~p~~ 262 (276)
T 1vs1_A 190 TR---FTLD----VAAVAVLKEATHLPVIVDPSHPAGRRSLVPALAKAGLAAGADGLIVEVHPNPEEALSDAKQQLTPGE 262 (276)
T ss_dssp SS---SBCB----HHHHHHHHHHBSSCEEECCHHHHCSGGGHHHHHHHHHHTTCSEEEEEBCSSGGGCSSCGGGCBCHHH
T ss_pred Cc---chhC----HHHHHHHHHHhCCCEEEeCCCCCCccchHHHHHHHHHHcCCCEEEEEecCCcccCCCchhcCCCHHH
Confidence 11 1122 22233344432111211 11 1211222445566778899988654311 1 123357788
Q ss_pred HHHHHHHc
Q 016599 349 DQLMFKVL 356 (386)
Q Consensus 349 ~~~~i~~~ 356 (386)
..+|+++.
T Consensus 263 ~~~lv~~i 270 (276)
T 1vs1_A 263 FARLMGEL 270 (276)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777653
No 282
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=49.58 E-value=82 Score=29.68 Aligned_cols=70 Identities=17% Similarity=0.164 Sum_probs=45.1
Q ss_pred HHHHHHcCCcEEEEeccc-CCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAW-RDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~-~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.|.+.+.+ ....+.+..++.+.++.+.++. .+++..+-|..+.+.+.+....|++.|.++
T Consensus 266 A~~a~~aGad~I~vs~~ggr~~~~g~~~~~~l~~v~~av~~-~ipVia~GGI~~g~Dv~kalalGAd~V~iG 336 (392)
T 2nzl_A 266 AREAVKHGLNGILVSNHGARQLDGVPATIDVLPEIVEAVEG-KVEVFLDGGVRKGTDVLKALALGAKAVFVG 336 (392)
T ss_dssp HHHHHHTTCCEEEECCGGGTSSTTCCCHHHHHHHHHHHHTT-SSEEEECSSCCSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCCEEEeCCCCCCcCCCCcChHHHHHHHHHHcCC-CCEEEEECCCCCHHHHHHHHHhCCCeeEEC
Confidence 456667899988885433 1112223344455554444432 478888888888777777777999999875
No 283
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=49.39 E-value=99 Score=28.69 Aligned_cols=70 Identities=13% Similarity=0.104 Sum_probs=46.1
Q ss_pred HHHHHHcCCcEEEEeccc-CCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAW-RDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~-~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.|.+++.+ +...+.+..++.+.++.+.++. .+++..+-|..+.+.+.+...+|.+.+.++
T Consensus 231 A~~a~~~GaD~I~vsn~GG~~~d~~~~~~~~L~~i~~av~~-~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 231 AELAMKHNVQGIVVSNHGGRQLDEVSASIDALREVVAAVKG-KIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHTTCSEEEECCGGGTSSCSSCCHHHHHHHHHHHHTT-SSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHcCCCEEEEeCCCCCccCCCccHHHHHHHHHHHhCC-CCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 455667899988885432 2222334455556565554432 478888888887766666667999999885
No 284
>2b7n_A Probable nicotinate-nucleotide pyrophosphorylase; quinolinate phosphoribosyltransferase, quinolinic acid, HELI pylori, transferase; HET: NTM; 2.30A {Helicobacter pylori} PDB: 2b7p_A* 2b7q_A*
Probab=49.36 E-value=30 Score=30.99 Aligned_cols=65 Identities=11% Similarity=-0.011 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
+++|+.+. .+.|++.|.+.. . ..+.+.+.++.++.. ++.+..+.|. +.+.+..+.++|+|.+.+
T Consensus 191 tlee~~~A----~~aGaD~I~ld~------~---~~~~l~~~v~~l~~~~~~~~i~AsGGI-~~~ni~~~~~aGaD~i~v 256 (273)
T 2b7n_A 191 SFEEAKNA----MNAGADIVMCDN------L---SVLETKEIAAYRDAHYPFVLLEASGNI-SLESINAYAKSGVDAISV 256 (273)
T ss_dssp SHHHHHHH----HHHTCSEEEEET------C---CHHHHHHHHHHHHHHCTTCEEEEESSC-CTTTHHHHHTTTCSEEEC
T ss_pred CHHHHHHH----HHcCCCEEEECC------C---CHHHHHHHHHHhhccCCCcEEEEECCC-CHHHHHHHHHcCCcEEEE
Confidence 45555433 345877665532 1 235555555555532 3667777765 899999999999999987
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
+
T Consensus 257 G 257 (273)
T 2b7n_A 257 G 257 (273)
T ss_dssp T
T ss_pred c
Confidence 5
No 285
>1x1o_A Nicotinate-nucleotide pyrophosphorylase; transferase, structural genomics, NPPSFA, national project O structural and functional analyses; 1.90A {Thermus thermophilus}
Probab=49.15 E-value=62 Score=29.11 Aligned_cols=41 Identities=15% Similarity=0.207 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 159 NQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 159 ~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+.+.+.++.++. .+++..+ |-++.+.+..+.++|+|.|.++
T Consensus 228 ~~~k~av~~v~~-~ipi~As-GGIt~eni~~~a~tGvD~IsVg 268 (286)
T 1x1o_A 228 EALREAVRRVGG-RVPLEAS-GNMTLERAKAAAEAGVDYVSVG 268 (286)
T ss_dssp HHHHHHHHHHTT-SSCEEEE-SSCCHHHHHHHHHHTCSEEECT
T ss_pred HHHHHHHHHhCC-CCeEEEE-cCCCHHHHHHHHHcCCCEEEEc
Confidence 444455555542 3555555 4478999999999999999874
No 286
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=49.13 E-value=45 Score=31.30 Aligned_cols=124 Identities=15% Similarity=0.159 Sum_probs=62.2
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhh--cCcEE-EEecCCCCHHHHHHHHHhccCe
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRD--MGMEV-CCTLGMLEKHQAIELKKAGLTA 197 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~--~g~~i-~~t~g~l~~e~l~~Lk~aG~~~ 197 (386)
++++-++.++.+.+ .|-. .+.+-. + .-...++..++++.+.+ .++.. .-....-+.+.+.+|++.- .
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~L~vDa--N----~~w~~~~A~~~~~~l~~~~~~l~~iEeP~~~~d~~~~~~l~~~~--~ 239 (379)
T 3r0u_A 168 DFNRDIQLLKALDNEFSKNIKFRFDA--N----QGWNLAQTKQFIEEINKYSLNVEIIEQPVKYYDIKAMAEITKFS--N 239 (379)
T ss_dssp CHHHHHHHHHHHHHHCCTTSEEEEEC--T----TCCCHHHHHHHHHHHHTSCCCEEEEECCSCTTCHHHHHHHHHHC--S
T ss_pred CHHHHHHHHHHHHHhcCCCCeEEEeC--C----CCcCHHHHHHHHHHHhhcCCCcEEEECCCCcccHHHHHHHHhcC--C
Confidence 45666666666665 3432 343321 1 11345677777777777 55542 2112223566777776641 2
Q ss_pred eeccc-C---chHHHHhhhCC------------CCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHH
Q 016599 198 YNHNL-D---TSREFYSKIIT------------TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTL 257 (386)
Q Consensus 198 v~i~l-e---~~~~~~~~i~~------------~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l 257 (386)
+++.. | +..+..+.+.. -....+.++....+++.|+.+..+.++ ++.=-+...+.+.
T Consensus 240 iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hla 312 (379)
T 3r0u_A 240 IPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKIKKLADSAGISCMVGCMM---ESPAGILATASFA 312 (379)
T ss_dssp SCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCS---CCHHHHHHHHHHH
T ss_pred CCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEEEeCCC---ccHHHHHHHHHHH
Confidence 33322 1 21222222211 124677778888888888886655443 3433344444443
No 287
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=49.07 E-value=45 Score=30.25 Aligned_cols=61 Identities=8% Similarity=0.113 Sum_probs=38.9
Q ss_pred HHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 131 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
++++.+.|++.|.+-. ...+.+.+.++.+.. .+.+..+ |-++.+.++.+.+.|+|.++++-
T Consensus 222 ~~eAl~aGaD~I~LDn---------~~~~~l~~av~~i~~-~v~ieaS-GGI~~~~i~~~a~tGVD~isvG~ 282 (298)
T 3gnn_A 222 LRTALAHGARSVLLDN---------FTLDMMRDAVRVTEG-RAVLEVS-GGVNFDTVRAIAETGVDRISIGA 282 (298)
T ss_dssp HHHHHHTTCEEEEEES---------CCHHHHHHHHHHHTT-SEEEEEE-SSCSTTTHHHHHHTTCSEEECGG
T ss_pred HHHHHHcCCCEEEECC---------CCHHHHHHHHHHhCC-CCeEEEE-cCCCHHHHHHHHHcCCCEEEECC
Confidence 3344456876665532 123556666665532 3445555 44689999999999999998753
No 288
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=48.91 E-value=1.4e+02 Score=26.23 Aligned_cols=157 Identities=14% Similarity=0.138 Sum_probs=90.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc----------------C-----cE------
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM----------------G-----ME------ 174 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~----------------g-----~~------ 174 (386)
-+.|+.++.++++.+.....+.++=| .|+|..+....++.+..... + +.
T Consensus 70 ~tve~AV~~mk~y~~~~~~avSVGLG----aGDP~Q~~~Va~IA~~~~P~HVNQVFtgag~trg~L~~~~T~VNaLVSPT 145 (275)
T 3m6y_A 70 PTVEEAVTAMKAYGKEIDDAVSIGLG----AGDNRQAAVVAEIAKHYPGSHINQVFPSVGATRANLGEKDSWINSLVSPT 145 (275)
T ss_dssp SSHHHHHHHHHHHHHHTTTCEEEECC----TTCGGGHHHHHHHTTTCCCSEECCBGGGHHHHHHHHTTCCCEEEEEEBCC
T ss_pred CCHHHHHHHHHHHHHhCCCceEEecC----CCCHHHHHHHHHHHHhcCCCcccccccchHHHHhhcCCCccEEEEEEcCC
Confidence 58999999999888765443444221 14566666666655443210 1 00
Q ss_pred -----EEEecCCCC-----------HHHHHHHHHhccCeeec-ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE
Q 016599 175 -----VCCTLGMLE-----------KHQAIELKKAGLTAYNH-NLDTSREFYSKIITTRSYDERLETLKHVREAGINVCS 237 (386)
Q Consensus 175 -----i~~t~g~l~-----------~e~l~~Lk~aG~~~v~i-~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~ 237 (386)
+-++.|.++ +..+..|++.|.+++-+ .+. +....++.....+.+.+.|+.+..
T Consensus 146 G~~G~VkISTGp~Sas~~~~~~V~vetAiaml~dmG~~SvKffPM~----------Gl~~leEl~avAkAca~~g~~lEP 215 (275)
T 3m6y_A 146 GKVGYVNISTGPISAAGEEKAIVPIKTAIALVRDMGGNSLKYFPMK----------GLAHEEEYRAVAKACAEEGFALEP 215 (275)
T ss_dssp SSTTEEECCCSTTGGGSSSCCEEEHHHHHHHHHHHTCCEEEECCCT----------TTTTHHHHHHHHHHHHHHTCEEEE
T ss_pred CCcceEEeccCCCccccCCCceeeHHHHHHHHHHcCCCeeeEeecC----------CcccHHHHHHHHHHHHHcCceECC
Confidence 122334322 56688889999888764 332 234677777888888999984333
Q ss_pred eEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeec--CCCCCCCCCCCCHHHHHHHHHHHHHhCC
Q 016599 238 GGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAV--KGTPLQDQKPVEIWEMIRMIATARIVMP 303 (386)
Q Consensus 238 ~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~--~gT~l~~~~~~s~~e~~~~~a~~R~~lp 303 (386)
+ = |-+.+.+.++++.+.+.| +..+.-+.|.-+ +.|- ...+++..++++..+.++.
T Consensus 216 T--G--GIdl~Nf~~I~~i~l~aG--v~~viPHIYsSIIDk~TG-----~TrpedV~~ll~~~K~l~~ 272 (275)
T 3m6y_A 216 T--G--GIDKENFETIVRIALEAN--VEQVIPHVYSSIIDKETG-----NTKVEAVRELLAVVKKLVD 272 (275)
T ss_dssp B--S--SCCTTTHHHHHHHHHHTT--CSCBCCEECGGGBCTTTC-----CBCHHHHHHHHHHHHHHHT
T ss_pred C--C--CccHhHHHHHHHHHHHcC--CCeecccccceeccCCCC-----CCCHHHHHHHHHHHHHHHh
Confidence 1 1 345556666777777776 444444444322 2222 2346777777777665543
No 289
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=48.90 E-value=43 Score=29.39 Aligned_cols=43 Identities=7% Similarity=0.210 Sum_probs=34.0
Q ss_pred HHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 159 NQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 159 ~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+...+.++.+++ .++++.+.-|..+.+.+..+.++|.|.+.++
T Consensus 187 ~~~~~~i~~v~~~~~~pI~vgGGI~~~e~~~~~~~~GAdgvvVG 230 (262)
T 1rd5_A 187 PRVESLIQEVKKVTNKPVAVGFGISKPEHVKQIAQWGADGVIIG 230 (262)
T ss_dssp THHHHHHHHHHHHCSSCEEEESCCCSHHHHHHHHHTTCSEEEEC
T ss_pred chHHHHHHHHHhhcCCeEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 456667777774 3677888888877999999999999998875
No 290
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=48.63 E-value=97 Score=28.48 Aligned_cols=83 Identities=24% Similarity=0.258 Sum_probs=49.1
Q ss_pred cCCCCHHHHHHHHHH-------HHHcCCcEEEEeccc---------------CCC-CCChhh-HHHHHHHHHHHhhc-Cc
Q 016599 119 QKLMTKDAVMQAAQK-------AKEAGSTRFCMGAAW---------------RDT-IGRKTN-FNQILEYVKDIRDM-GM 173 (386)
Q Consensus 119 ~~~~s~eeI~~~~~~-------~~~~G~~~v~l~~g~---------------~~~-~ge~~~-~~~l~~~i~~ik~~-g~ 173 (386)
.+.|+.+||.+.++. +.+.|++.|-|-++. ++. +|.... ...++++++++++. .+
T Consensus 131 p~~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~avr~~v~~ 210 (340)
T 3gr7_A 131 PKEMTKADIEETVQAFQNGARRAKEAGFDVIEIHAAHGYLINEFLSPLSNRRQDEYGGSPENRYRFLGEVIDAVREVWDG 210 (340)
T ss_dssp CEECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCS
T ss_pred CccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHcCCCccCcCCCcccCCHHHHHHHHHHHHHHHHHhcCC
Confidence 345899998776654 345799988876541 111 232222 24567888888743 44
Q ss_pred EE--EEecC------C---CCHHHHHHHHHhccCeeecc
Q 016599 174 EV--CCTLG------M---LEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 174 ~i--~~t~g------~---l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.+ -++.. . ...+.++.|.++|+|.+.++
T Consensus 211 pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 211 PLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp CEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred ceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 43 23322 1 12466777888888888774
No 291
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=48.44 E-value=91 Score=30.16 Aligned_cols=115 Identities=14% Similarity=0.207 Sum_probs=65.2
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcE--EEEec--CCCCHHHHHHHHHhccCe
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGME--VCCTL--GMLEKHQAIELKKAGLTA 197 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~--i~~t~--g~l~~e~l~~Lk~aG~~~ 197 (386)
+++.+++.++++.+.|++.|++.- +.|- ..-..+.++++.+++ .+++ +++++ |.-....+..+ ++|++.
T Consensus 156 ~~e~~~~~a~~l~~~Gad~I~l~D----T~G~-~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv-~AGa~~ 229 (464)
T 2nx9_A 156 NLQTWVDVAQQLAELGVDSIALKD----MAGI-LTPYAAEELVSTLKKQVDVELHLHCHSTAGLADMTLLKAI-EAGVDR 229 (464)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEE----TTSC-CCHHHHHHHHHHHHHHCCSCEEEEECCTTSCHHHHHHHHH-HTTCSE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEcC----CCCC-cCHHHHHHHHHHHHHhcCCeEEEEECCCCChHHHHHHHHH-HhCCCE
Confidence 678889999999999998888731 1121 122455666666653 2333 44443 44444445444 689999
Q ss_pred eecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhc
Q 016599 198 YNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLAT 259 (386)
Q Consensus 198 v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~ 259 (386)
|..++.++ +. ...-+.+.++..++ ..|+.+ |-+.+.+.++.+++.+
T Consensus 230 VD~ti~g~ger-----tGN~~lE~lv~~L~---~~g~~t--------gidl~~L~~is~~v~~ 276 (464)
T 2nx9_A 230 VDTAISSMSGT-----YGHPATESLVATLQ---GTGYDT--------GLDIAKLEQIAAYFRD 276 (464)
T ss_dssp EEEBCGGGCST-----TSCCBHHHHHHHHT---TSTTCC--------CCCHHHHHHHHHHHHH
T ss_pred EEEeccccCCC-----CcCHHHHHHHHHHH---hcCCCc--------ccCHHHHHHHHHHHHH
Confidence 88877765 31 12235665554443 345442 3345555555555543
No 292
>3dx5_A Uncharacterized protein ASBF; beta-alpha barrel, petrobactin synthesis, ASB locus, structu genomics, PSI-2, protein structure initiative; HET: MSE DHB TRS; 2.12A {Bacillus anthracis}
Probab=48.44 E-value=1.1e+02 Score=26.71 Aligned_cols=125 Identities=11% Similarity=0.018 Sum_probs=0.0
Q ss_pred HHHHHHHHHHcCCcEEEEecccCCCCCChhhH-----HHHHHHHHHHhhcCcEEEEecCCCC--------------HHHH
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNF-----NQILEYVKDIRDMGMEVCCTLGMLE--------------KHQA 187 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~-----~~l~~~i~~ik~~g~~i~~t~g~l~--------------~e~l 187 (386)
+.+.++.+.+.|++.|-+.+.. ...+ ..+.++-+.+++.|+.+........ .+.+
T Consensus 17 ~~~~l~~~~~~G~~~vEl~~~~------~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~~~i 90 (286)
T 3dx5_A 17 FTDIVQFAYENGFEGIELWGTH------AQNLYMQEYETTERELNCLKDKTLEITMISDYLDISLSADFEKTIEKCEQLA 90 (286)
T ss_dssp HHHHHHHHHHTTCCEEEEEHHH------HHHHHHHCHHHHHHHHHHTGGGTCCEEEEECCCCCSTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEcccc------cccccccCHHHHHHHHHHHHHcCCeEEEEecCCCCCCchhHHHHHHHHHHHH
Q ss_pred HHHHHhccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHH
Q 016599 188 IELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTL 257 (386)
Q Consensus 188 ~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l 257 (386)
+..++.|+..|.+..-.. ......-......+..-+..+.+.+.|+.+......+. ..+.+++.++++.+
T Consensus 91 ~~A~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~~~~~l~~~~ 162 (286)
T 3dx5_A 91 ILANWFKTNKIRTFAGQKGSADFSQQERQEYVNRIRMICELFAQHNMYVLLETHPNTLTDTLPSTLELLGEV 162 (286)
T ss_dssp HHHHHHTCCEEEECSCSSCGGGSCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCTTSTTSSHHHHHHHHHHH
T ss_pred HHHHHhCCCEEEEcCCCCCcccCcHHHHHHHHHHHHHHHHHHHHhCCEEEEecCCCcCcCCHHHHHHHHHhc
No 293
>2jbm_A Nicotinate-nucleotide pyrophosphorylase; NAD, enzyme, metabolism, transferase, polymorphism, glycosyltransferase, pyridine nucleotide biosynthesis; HET: SRT; 2.0A {Homo sapiens} PDB: 3lar_A
Probab=48.42 E-value=24 Score=32.04 Aligned_cols=65 Identities=11% Similarity=0.099 Sum_probs=42.3
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
+++|+.+ +.+.|++.|.+.. . ..+.+.++++.++.. .+.+..+.|. +.+.+..+.++|+|.+.+
T Consensus 206 tlee~~~----A~~aGaD~I~ld~------~---~~~~l~~~v~~l~~~~~~~~I~ASGGI-t~~ni~~~~~aGaD~i~v 271 (299)
T 2jbm_A 206 SLQEAVQ----AAEAGADLVLLDN------F---KPEELHPTATVLKAQFPSVAVEASGGI-TLDNLPQFCGPHIDVISM 271 (299)
T ss_dssp SHHHHHH----HHHTTCSEEEEES------C---CHHHHHHHHHHHHHHCTTSEEEEESSC-CTTTHHHHCCTTCCEEEC
T ss_pred CHHHHHH----HHHcCCCEEEECC------C---CHHHHHHHHHHhhccCCCeeEEEECCC-CHHHHHHHHHCCCCEEEE
Confidence 3455443 3346877665532 1 235555656655532 3667777665 899999999999999987
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
+
T Consensus 272 G 272 (299)
T 2jbm_A 272 G 272 (299)
T ss_dssp T
T ss_pred C
Confidence 5
No 294
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=48.31 E-value=1.5e+02 Score=26.40 Aligned_cols=118 Identities=19% Similarity=0.139 Sum_probs=81.8
Q ss_pred EEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCC--CCCHHHHHHHHHHHHH-cCCeeeEeEEeecCCCHHHHHH
Q 016599 176 CCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIIT--TRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVG 252 (386)
Q Consensus 176 ~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~--~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~ 252 (386)
.+-++..+.-..+.+.++|++.+.++=.+.... ...-. .-++++.+..++.+.+ ..+++.+++=.|+|.+.++..+
T Consensus 18 i~~~~a~D~~sA~~~~~aG~~ai~vsg~s~a~~-~G~pD~~~vt~~em~~~~~~I~~~~~~pviaD~d~Gyg~~~~~~~~ 96 (275)
T 2ze3_A 18 FLLPNAWDVASARLLEAAGFTAIGTTSAGIAHA-RGRTDGQTLTRDEMGREVEAIVRAVAIPVNADIEAGYGHAPEDVRR 96 (275)
T ss_dssp EEECEESSHHHHHHHHHHTCSCEEECHHHHHHH-SCCCSSSSSCHHHHHHHHHHHHHHCSSCEEEECTTCSSSSHHHHHH
T ss_pred eeEecccCHHHHHHHHHcCCCEEEECcHHHHHh-CCCCCCCCCCHHHHHHHHHHHHhhcCCCEEeecCCCCCCCHHHHHH
Confidence 344666788889999999999998864333211 11111 2379999988888665 4678999999998889999999
Q ss_pred HHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHh
Q 016599 253 LLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIV 301 (386)
Q Consensus 253 ~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~ 301 (386)
++..+.+.| ..-+.+---... ......+.+++...+..++..
T Consensus 97 ~v~~l~~aG--aagv~iED~~~~-----~~k~l~~~~e~~~~I~aa~~a 138 (275)
T 2ze3_A 97 TVEHFAALG--VAGVNLEDATGL-----TPTELYDLDSQLRRIEAARAA 138 (275)
T ss_dssp HHHHHHHTT--CSEEEEECBCSS-----SSSCBCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcC--CcEEEECCCcCC-----CCCccCCHHHHHHHHHHHHHh
Confidence 998888876 555555221111 233557888888888777655
No 295
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=48.29 E-value=49 Score=30.89 Aligned_cols=125 Identities=17% Similarity=0.156 Sum_probs=70.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 125 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
+...+.++.+.+.|++-+.+-.. .|.+ +.+.+.++.+|+. ++.+..- +..+.+.++.+.++|+|.|.++.
T Consensus 99 ~~~~e~~~~a~~aGvdvI~id~a----~G~~---~~~~e~I~~ir~~~~~~~Vi~G-~V~T~e~A~~a~~aGaD~I~Vg~ 170 (361)
T 3r2g_A 99 ENELQRAEALRDAGADFFCVDVA----HAHA---KYVGKTLKSLRQLLGSRCIMAG-NVATYAGADYLASCGADIIKAGI 170 (361)
T ss_dssp HHHHHHHHHHHHTTCCEEEEECS----CCSS---HHHHHHHHHHHHHHTTCEEEEE-EECSHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHHHcCCCEEEEeCC----CCCc---HhHHHHHHHHHHhcCCCeEEEc-CcCCHHHHHHHHHcCCCEEEEcC
Confidence 34566677888889986666321 1222 3567778888864 5665441 14678999999999999999876
Q ss_pred Cch--HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEe-ecCCCHHHHHHHHHHHhcCCCCCCeEeee
Q 016599 203 DTS--REFYSKIITTRSYDERLETLKHVREAGINVCSGGII-GLGEAEEDRVGLLHTLATLPTHPESVPIN 270 (386)
Q Consensus 203 e~~--~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~-Glget~ed~~~~l~~l~~l~~~~~~v~~~ 270 (386)
... -........+.. .+..+..+.++-. -+|. |=--+.+|+.+.+. +| .+.+.+-
T Consensus 171 g~G~~~~tr~~~g~g~p---~l~aI~~~~~~~~----PVIAdGGI~~~~di~kALa----~G--Ad~V~iG 228 (361)
T 3r2g_A 171 GGGSVCSTRIKTGFGVP---MLTCIQDCSRADR----SIVADGGIKTSGDIVKALA----FG--ADFVMIG 228 (361)
T ss_dssp SSSSCHHHHHHHCCCCC---HHHHHHHHTTSSS----EEEEESCCCSHHHHHHHHH----TT--CSEEEES
T ss_pred CCCcCccccccCCccHH---HHHHHHHHHHhCC----CEEEECCCCCHHHHHHHHH----cC--CCEEEEC
Confidence 542 121111111112 3445555544322 2222 21235677776654 44 5566553
No 296
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=48.07 E-value=42 Score=31.49 Aligned_cols=127 Identities=14% Similarity=0.171 Sum_probs=63.8
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEE-ecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCC-TLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~-t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
++++-++.++.+.+ .|-. .+.+-. + .....++..++++.+.+.++...- ....-+.+.+..|++.- .++
T Consensus 175 ~~~~d~~~v~avR~a~g~~~~l~vDa--N----~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ip 246 (381)
T 3fcp_A 175 ELATDLRHTRAIVEALGDRASIRVDV--N----QAWDAATGAKGCRELAAMGVDLIEQPVSAHDNAALVRLSQQI--ETA 246 (381)
T ss_dssp CHHHHHHHHHHHHHHTCTTCEEEEEC--T----TCBCHHHHHHHHHHHHHTTCSEEECCBCTTCHHHHHHHHHHS--SSE
T ss_pred ChHHHHHHHHHHHHHcCCCCeEEEEC--C----CCCCHHHHHHHHHHHhhcCccceeCCCCcccHHHHHHHHHhC--CCC
Confidence 45555666666655 4532 333321 1 113456667777777766654211 11123456666666642 233
Q ss_pred ccc----CchHHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 200 HNL----DTSREFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 200 i~l----e~~~~~~~~i~------------~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.. .+..+..+.+. +-....+.++.+..+.+.|+.+..+.++ ++.=-+...+.+...+
T Consensus 247 Ia~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~ 320 (381)
T 3fcp_A 247 ILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLALARVAQAAGIGLYGGTML---EGTVGTVASLHAWSTL 320 (381)
T ss_dssp EEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHHHHHHHHHHTCEEEECCSC---CCHHHHHHHHHHHTTS
T ss_pred EEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHHHHHHHHcCCceecCCCC---ccHHHHHHHHHHHHhC
Confidence 322 12222222221 1124567788888899999987554433 4444455556665544
No 297
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=48.07 E-value=61 Score=30.45 Aligned_cols=23 Identities=9% Similarity=0.016 Sum_probs=13.0
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEec
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTL 179 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~ 179 (386)
..+...++++.+.+.|+. +.++.
T Consensus 264 ~~~~~~~la~~l~~~Gvd~i~v~~ 287 (379)
T 3aty_A 264 PEALTKHLCKKIEPLSLAYLHYLR 287 (379)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred CHHHHHHHHHHHHHhCCCEEEEcC
Confidence 345666666666666655 33443
No 298
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=47.92 E-value=67 Score=27.75 Aligned_cols=104 Identities=14% Similarity=0.151 Sum_probs=58.9
Q ss_pred HHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecccCch-HHHHh
Q 016599 132 QKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS-REFYS 210 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~ 210 (386)
+++.+.|++.|.+.+... ..| +.+.++++.+++.|+.+.... .+.+.++.+.++|+|.+.+++..+ ...
T Consensus 95 ~~~~~aGad~I~l~~~~~---~~p---~~l~~~i~~~~~~g~~v~~~v--~t~eea~~a~~~Gad~Ig~~~~g~t~~~-- 164 (229)
T 3q58_A 95 DALAQAGADIIAFDASFR---SRP---VDIDSLLTRIRLHGLLAMADC--STVNEGISCHQKGIEFIGTTLSGYTGPI-- 164 (229)
T ss_dssp HHHHHHTCSEEEEECCSS---CCS---SCHHHHHHHHHHTTCEEEEEC--SSHHHHHHHHHTTCSEEECTTTTSSSSC--
T ss_pred HHHHHcCCCEEEECcccc---CCh---HHHHHHHHHHHHCCCEEEEec--CCHHHHHHHHhCCCCEEEecCccCCCCC--
Confidence 345667999887654321 123 345666666777788765543 468889999999999996544332 111
Q ss_pred hhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCC-CHHHHHHHH
Q 016599 211 KIITTRSYDERLETLKHVREAGINVCSGGIIGLGE-AEEDRVGLL 254 (386)
Q Consensus 211 ~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glge-t~ed~~~~l 254 (386)
+ ....++ +.++.+++.+++ ++..=|- |.+++.+.+
T Consensus 165 ~-~~~~~~----~li~~l~~~~ip----vIA~GGI~t~~d~~~~~ 200 (229)
T 3q58_A 165 T-PVEPDL----AMVTQLSHAGCR----VIAEGRYNTPALAANAI 200 (229)
T ss_dssp C-CSSCCH----HHHHHHHTTTCC----EEEESSCCSHHHHHHHH
T ss_pred c-CCCCCH----HHHHHHHHcCCC----EEEECCCCCHHHHHHHH
Confidence 1 112244 444555554444 2221132 677776664
No 299
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=47.84 E-value=46 Score=31.09 Aligned_cols=109 Identities=13% Similarity=0.103 Sum_probs=54.4
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe-cCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT-LGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
++++-++.++.+.+ .|.. .+.+-. + .-...++..++++.+.+.++...-- ...-+.+.+..|++.- .++
T Consensus 179 ~~~~d~~~v~avR~~~g~~~~l~vDa--n----~~~~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iP 250 (372)
T 3tj4_A 179 DPNIDIARLTAVRERVDSAVRIAIDG--N----GKWDLPTCQRFCAAAKDLDIYWFEEPLWYDDVTSHARLARNT--SIP 250 (372)
T ss_dssp SHHHHHHHHHHHHHHSCTTCEEEEEC--T----TCCCHHHHHHHHHHTTTSCEEEEESCSCTTCHHHHHHHHHHC--SSC
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEeeC--C----CCCCHHHHHHHHHHHhhcCCCEEECCCCchhHHHHHHHHhhc--CCC
Confidence 45565666666655 3433 232211 1 1134566777777777666542111 1123456666666541 123
Q ss_pred cc----cCchHHHHhhh------------CCCCCHHHHHHHHHHHHHcCCeeeEeE
Q 016599 200 HN----LDTSREFYSKI------------ITTRSYDERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 200 i~----le~~~~~~~~i------------~~~~s~~~~l~~i~~a~~~Gi~v~~~~ 239 (386)
+. +.+..+..+.+ .+-....+.++....++++|+.+..+.
T Consensus 251 Ia~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~ 306 (372)
T 3tj4_A 251 IALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQVADLALAHRLPVVPHA 306 (372)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCCBCCCC
T ss_pred EEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecC
Confidence 21 22221111111 112247788888888888888866543
No 300
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=47.67 E-value=67 Score=31.48 Aligned_cols=70 Identities=16% Similarity=0.216 Sum_probs=46.8
Q ss_pred HHHHHHcCCcEEEEecccCC--------CCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRD--------TIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~--------~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.+.++.+... -.|. ..+..+.++.+.+++.++++...-|..+.+.+.+...+|.+.+.++
T Consensus 311 a~~~~~aGad~i~vg~g~gsi~~~~~~~g~g~-p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kala~GA~~V~vG 388 (511)
T 3usb_A 311 TKALIEAGANVVKVGIGPGSICTTRVVAGVGV-PQLTAVYDCATEARKHGIPVIADGGIKYSGDMVKALAAGAHVVMLG 388 (511)
T ss_dssp HHHHHHHTCSEEEECSSCSTTCCHHHHHCCCC-CHHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHhCCCEEEECCCCccccccccccCCCC-CcHHHHHHHHHHHHhCCCcEEEeCCCCCHHHHHHHHHhCchhheec
Confidence 34455678887766322111 0111 2345566666666677899989999989888888888999998874
No 301
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=47.65 E-value=41 Score=31.31 Aligned_cols=126 Identities=10% Similarity=0.076 Sum_probs=64.7
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHH-hhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDI-RDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~i-k~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+++..++.++.+++ .|-+ .+.+-. + . -...++..++++.+ .+.++ . +.-...+.+.++++++.- .++
T Consensus 172 ~~~~~~e~v~avr~a~g~~~~l~vDa--n--~--~~~~~~a~~~~~~l~~~~~i-~-iE~P~~~~~~~~~l~~~~--~iP 241 (371)
T 2ps2_A 172 EPVTDAKRITAALANQQPDEFFIVDA--N--G--KLSVETALRLLRLLPHGLDF-A-LEAPCATWRECISLRRKT--DIP 241 (371)
T ss_dssp CHHHHHHHHHHHTTTCCTTCEEEEEC--T--T--BCCHHHHHHHHHHSCTTCCC-E-EECCBSSHHHHHHHHTTC--CSC
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEEEC--C--C--CcCHHHHHHHHHHHHhhcCC-c-CcCCcCCHHHHHHHHhhC--CCC
Confidence 45655666666555 3422 232221 1 1 12356677777777 66665 2 221112566666666541 233
Q ss_pred ccc-Cch---HHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 200 HNL-DTS---REFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 200 i~l-e~~---~~~~~~i~------------~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.. |+. .+..+.+. +-....+.++.++.++++|+.+..+.++ ++.=-....+.+...++
T Consensus 242 I~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~~~~~~---es~i~~aa~~hlaa~~~ 316 (371)
T 2ps2_A 242 IIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRRQRDICLAAGYSVSVQETC---GSDIAFAAIVHLAQTIP 316 (371)
T ss_dssp EEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHHHHHHHHHHTCEEEEECSS---CCHHHHHHHHHHHTTSC
T ss_pred EEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHHHHHHHHHcCCeEEecCCC---cCHHHHHHHHHHHHhCC
Confidence 311 221 11111111 1235778888889999999987655443 45444555666665553
No 302
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=47.63 E-value=1.5e+02 Score=28.23 Aligned_cols=22 Identities=32% Similarity=0.454 Sum_probs=17.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEe
Q 016599 217 SYDERLETLKHVREAGINVCSG 238 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~ 238 (386)
...+.++....+.++|+.+..+
T Consensus 335 Git~~~kia~lA~~~gv~v~~H 356 (441)
T 4a35_A 335 SVNENLSVLLMAKKFEIPVCPH 356 (441)
T ss_dssp HHHHHHHHHHHHHHTTCCBCCC
T ss_pred CHHHHHHHHHHHHHcCCEEEEe
Confidence 4777888888888889887654
No 303
>3tha_A Tryptophan synthase alpha chain; structural genomics, center for structural genomics of infec diseases, csgid, lyase; 2.37A {Campylobacter jejuni}
Probab=47.37 E-value=1.5e+02 Score=26.09 Aligned_cols=65 Identities=11% Similarity=0.195 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHH
Q 016599 158 FNQILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHV 228 (386)
Q Consensus 158 ~~~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a 228 (386)
.+.+.++++++|+. +.++++-.|..+++.++.+.+ +.|.+-++ ..+.+.+. .++.++.++.++.+
T Consensus 184 ~~~~~~~v~~vr~~~~~Pv~vGfGIst~e~a~~~~~-~ADGVIVG----SAiVk~i~-~~~~~~~~~~~~~~ 249 (252)
T 3tha_A 184 EAILQDKVKEIRSFTNLPIFVGFGIQNNQDVKRMRK-VADGVIVG----TSIVKCFK-QGNLDIIMKDIEEI 249 (252)
T ss_dssp HHHHHHHHHHHHTTCCSCEEEESSCCSHHHHHHHTT-TSSEEEEC----HHHHHHTT-SSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCcEEEEcCcCCHHHHHHHHh-cCCEEEEC----HHHHHHHH-hcCHHHHHHHHHHH
Confidence 35677888888864 567788888888998888865 47777664 22333332 23566666555544
No 304
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=47.15 E-value=1.1e+02 Score=24.62 Aligned_cols=68 Identities=15% Similarity=0.194 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcC---cEEEEecCCCCHHHHHHHHHhccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMG---MEVCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g---~~i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
.+++++++.++ +.+.+-|.+++-. ....+.+.++++.+++.+ +.+.+ .|....+....+++.|+|.+
T Consensus 56 ~p~e~lv~aa~---~~~~diV~lS~~~------~~~~~~~~~~i~~L~~~g~~~i~v~v-GG~~~~~~~~~l~~~G~d~v 125 (161)
T 2yxb_A 56 QTPEQVAMAAV---QEDVDVIGVSILN------GAHLHLMKRLMAKLRELGADDIPVVL-GGTIPIPDLEPLRSLGIREI 125 (161)
T ss_dssp CCHHHHHHHHH---HTTCSEEEEEESS------SCHHHHHHHHHHHHHHTTCTTSCEEE-EECCCHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHH---hcCCCEEEEEeec------hhhHHHHHHHHHHHHhcCCCCCEEEE-eCCCchhcHHHHHHCCCcEE
Confidence 68888886555 4567777775521 134567777777777654 34443 35566667778999999975
Q ss_pred e
Q 016599 199 N 199 (386)
Q Consensus 199 ~ 199 (386)
.
T Consensus 126 ~ 126 (161)
T 2yxb_A 126 F 126 (161)
T ss_dssp E
T ss_pred E
Confidence 4
No 305
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=47.03 E-value=1.9e+02 Score=27.25 Aligned_cols=44 Identities=14% Similarity=0.206 Sum_probs=32.2
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
....+.++.++.+++.|+.+..+.+. +||.--+...+++...++
T Consensus 336 GGitea~~i~~~A~~~gi~~~~~~~~--~et~i~~aa~~hlaaa~~ 379 (413)
T 1kko_A 336 GGIHNIVDAVLYCNKHGMEAYQGGTC--NETEISARTCVHVALAAR 379 (413)
T ss_dssp SSTHHHHHHHHHHHHHTCEEEECCCT--TSCHHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCeEEecCCC--CCCHHHHHHHHHHHHcCC
Confidence 35788899999999999986655432 478766677777776653
No 306
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=47.03 E-value=84 Score=28.06 Aligned_cols=95 Identities=21% Similarity=0.232 Sum_probs=56.0
Q ss_pred hhhHHHHHHHHHHHhhcCcEEEE---ecCC---CCHHHHHHHHHhccCe---eecccCchHHHHhhhCCCCCHHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVCC---TLGM---LEKHQAIELKKAGLTA---YNHNLDTSREFYSKIITTRSYDERLETL 225 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~~---t~g~---l~~e~l~~Lk~aG~~~---v~i~le~~~~~~~~i~~~~s~~~~l~~i 225 (386)
..+++.+.++++.+-+.|+...+ |.|. ++.+.-+++.+.-++. |-.++ ...+.++.++..
T Consensus 15 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~gvi~Gv-----------g~~~t~~ai~la 83 (286)
T 2r91_A 15 RLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAARRVIVQV-----------ASLNADEAIALA 83 (286)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCSSEEEEC-----------CCSSHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCEEEee-----------CCCCHHHHHHHH
Confidence 35677888888887767766332 3342 5555444443321211 22222 234678888888
Q ss_pred HHHHHcCCe-eeEeEEeecC-CCHHHHHHHHHHHhcC
Q 016599 226 KHVREAGIN-VCSGGIIGLG-EAEEDRVGLLHTLATL 260 (386)
Q Consensus 226 ~~a~~~Gi~-v~~~~i~Glg-et~ed~~~~l~~l~~l 260 (386)
+.+.++|.. +-+...+-.. -+.+++.++++.+.+-
T Consensus 84 ~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 120 (286)
T 2r91_A 84 KYAESRGAEAVASLPPYYFPRLSERQIAKYFRDLCSA 120 (286)
T ss_dssp HHHHHTTCSEEEECCSCSSTTCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 888889986 2222222224 5888999888887653
No 307
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=46.93 E-value=74 Score=30.12 Aligned_cols=78 Identities=8% Similarity=0.074 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHcC------CcEEEEecccCCC-CCChh---hHH-HHHHHHHHHhh-cCcEEEEecCCCCHHHHHHH
Q 016599 123 TKDAVMQAAQKAKEAG------STRFCMGAAWRDT-IGRKT---NFN-QILEYVKDIRD-MGMEVCCTLGMLEKHQAIEL 190 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G------~~~v~l~~g~~~~-~ge~~---~~~-~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~L 190 (386)
+.++..+.++.+.+.| +.-+.+.++.... ...+. ... .-.+.++.+|+ .++++..+.+. +.+.++++
T Consensus 258 ~~~~~~~la~~le~~G~~gg~~vd~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPvi~~G~i-~~~~a~~~ 336 (402)
T 2hsa_B 258 PLSLGLAVVERLNKIQLHSGSKLAYLHVTQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTFICSGGY-TRELGIEA 336 (402)
T ss_dssp HHHHHHHHHHHHHHHHHHHTSCCSEEEEECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCEEEESSC-CHHHHHHH
T ss_pred CHHHHHHHHHHHHhcCCccCCceEEEEEecCccccccCCccccccCCcchHHHHHHHHHHCCCCEEEeCCC-CHHHHHHH
Confidence 5677888888888888 8888876653211 00110 001 13566677764 46677666666 88888888
Q ss_pred HHhc-cCeeecc
Q 016599 191 KKAG-LTAYNHN 201 (386)
Q Consensus 191 k~aG-~~~v~i~ 201 (386)
.+.| +|.|.++
T Consensus 337 l~~g~aD~V~ig 348 (402)
T 2hsa_B 337 VAQGDADLVSYG 348 (402)
T ss_dssp HHTTSCSEEEES
T ss_pred HHCCCCceeeec
Confidence 8887 8888875
No 308
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=46.83 E-value=1.1e+02 Score=27.61 Aligned_cols=120 Identities=11% Similarity=0.062 Sum_probs=71.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 33 iD~~~l~~lv~~li~~Gv~gi~v~Gtt----GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 108 (304)
T 3l21_A 33 LDTATAARLANHLVDQGCDGLVVSGTT----GESPTTTDGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAA 108 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHH
Confidence 789999999999999999998775532 332 344555566655543 24676665554 4454444 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc-CCeeeEeEEe---ecCCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA-GINVCSGGII---GLGEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~-Gi~v~~~~i~---Glget~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.++ ++++-..-+. |..-+.+.+.++
T Consensus 109 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 165 (304)
T 3l21_A 109 EGAHGLLVVTPYY-------S-KPPQRGLQAHFTAVADATELPMLLYDIPGRSAVPIEPDTIRAL 165 (304)
T ss_dssp HTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHTSCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 6999887632111 1 12566677777665553 6765544333 334455555444
No 309
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=46.54 E-value=62 Score=30.08 Aligned_cols=84 Identities=11% Similarity=0.033 Sum_probs=46.1
Q ss_pred hHHHHHHHHHHHhhc-CcEE-EEecCCCCHHHHHHHHHhccCeeeccc-C---chHHHHh----------hhCCCCCHHH
Q 016599 157 NFNQILEYVKDIRDM-GMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-D---TSREFYS----------KIITTRSYDE 220 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~-g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e---~~~~~~~----------~i~~~~s~~~ 220 (386)
..++..++++.+.+. ++.. .-....-+.+.+..|++.--..+.+.. | +..+..+ ++.+-....+
T Consensus 200 ~~~~a~~~~~~l~~~~~i~~iEqP~~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~~a~d~i~ik~~~~GGit~ 279 (372)
T 3cyj_A 200 TRKQALYWAGAFAREAGISYLEEPVSSEDREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDLAGCVDILQADVTRCGGITG 279 (372)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEECSSCTTCHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHTTCSEEEECTTTTTHHHH
T ss_pred CHHHHHHHHHHHHhhcCCcEEECCCCcccHHHHHHHHHhCCCCCCEECCCCccCHHHHHHHhCCCCEEecCchhhCCHHH
Confidence 456677777777776 6552 211222356667777654211134322 2 2222211 1112235788
Q ss_pred HHHHHHHHHHcCCeeeEeEE
Q 016599 221 RLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 221 ~l~~i~~a~~~Gi~v~~~~i 240 (386)
.++.++.++++|+.+..+.+
T Consensus 280 ~~~i~~~A~~~gi~~~~~~~ 299 (372)
T 3cyj_A 280 LLRVDGICRGHQIPFSAHCA 299 (372)
T ss_dssp HTTHHHHHHHHTCCEEECSC
T ss_pred HHHHHHHHHHcCCeecccch
Confidence 89999999999998766654
No 310
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=46.36 E-value=1.1e+02 Score=28.25 Aligned_cols=41 Identities=24% Similarity=0.246 Sum_probs=27.6
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
....+.++.++.++++|+.+.+.-+ .++.=-....+.+. .+
T Consensus 268 GGit~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hla-a~ 308 (368)
T 1sjd_A 268 GGYLEARRVHDVCAAHGIPVWCGGM---IETGLGRAANVALA-SL 308 (368)
T ss_dssp TSHHHHHHHHHHHHHTTCCEEECCC---CCCHHHHHHHHHHH-TS
T ss_pred CCHHHHHHHHHHHHHcCCcEEeCCc---cccHHHHHHHHHHH-cC
Confidence 4688999999999999998532222 35544455566666 55
No 311
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=46.34 E-value=35 Score=32.37 Aligned_cols=40 Identities=8% Similarity=-0.071 Sum_probs=27.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
...+.++....+...|+.+..+.+ ++.=-+...+.+...+
T Consensus 265 Gitea~kia~lA~~~gi~v~~h~~----~s~i~~aa~~hlaaa~ 304 (405)
T 3rr1_A 265 GITECVKIAAMAEAYDVALAPHCP----LGPIALAACLHVDFVS 304 (405)
T ss_dssp HHHHHHHHHHHHHTTTCEECCBCC----SCHHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCC----CcHHHHHHHHHHHHhC
Confidence 478888888999999998777643 2333445556666555
No 312
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=46.27 E-value=94 Score=27.86 Aligned_cols=95 Identities=15% Similarity=0.123 Sum_probs=57.9
Q ss_pred hhhHHHHHHHHHHHhhcCcEEE---EecCC---CCHHHHHHHHHhccCee---ecccCchHHHHhhhCCCCCHHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVC---CTLGM---LEKHQAIELKKAGLTAY---NHNLDTSREFYSKIITTRSYDERLETL 225 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~---~t~g~---l~~e~l~~Lk~aG~~~v---~i~le~~~~~~~~i~~~~s~~~~l~~i 225 (386)
..+++.+.++++.+-+.|+... -|.|. ++.+.-+++.+.-++.+ -.++ ...+.++.++..
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~gviaGv-----------g~~~t~~ai~la 84 (293)
T 1w3i_A 16 RIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNKIIFQV-----------GGLNLDDAIRLA 84 (293)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSCEEEEC-----------CCSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCCEEEec-----------CCCCHHHHHHHH
Confidence 3677888888888877777632 23443 56655555544322222 2221 234778888888
Q ss_pred HHHHHcCCeeeEeE-EeecC-CCHHHHHHHHHHHhcC
Q 016599 226 KHVREAGINVCSGG-IIGLG-EAEEDRVGLLHTLATL 260 (386)
Q Consensus 226 ~~a~~~Gi~v~~~~-i~Glg-et~ed~~~~l~~l~~l 260 (386)
+.+.++|..--.-+ .+-.. -+.+++.++++.+.+-
T Consensus 85 ~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (293)
T 1w3i_A 85 KLSKDFDIVGIASYAPYYYPRMSEKHLVKYFKTLCEV 121 (293)
T ss_dssp HHGGGSCCSEEEEECCCSCSSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCCCCCCCCHHHHHHHHHHHHhh
Confidence 88888898632222 22124 5889999999887653
No 313
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=46.22 E-value=33 Score=32.13 Aligned_cols=42 Identities=14% Similarity=0.115 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
...+.++.+..+++.|+.+..+.++ ++.=-+...++++..++
T Consensus 278 Git~~~~i~~~a~~~gi~~~~~~~~---es~i~~aa~~hlaaa~~ 319 (377)
T 3my9_A 278 GLMKAQSLMAIADTAGLPGYGGTLW---EGGIALAAGTQLIAATP 319 (377)
T ss_dssp SHHHHHHHHHHHHHHTCCEECCEEC---CSHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHHcCCeEecCCCC---CcHHHHHHHHHHHHhCC
Confidence 5788888999999999987655544 44444556666666663
No 314
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=46.20 E-value=21 Score=32.87 Aligned_cols=67 Identities=15% Similarity=0.090 Sum_probs=45.2
Q ss_pred hhcCcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEe
Q 016599 169 RDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGII 241 (386)
Q Consensus 169 k~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~ 241 (386)
.+.|......+|.. .+.++.|+++|++.|-+.+-.-+. ....+++..+++++.++++|++|-.++-+
T Consensus 16 e~~g~~~~~~~G~~-~d~~~ilk~~G~N~VRi~~w~~P~-----~g~~~~~~~~~~~~~A~~~GlkV~ld~Hy 82 (332)
T 1hjs_A 16 ERAGVSYKNTNGNA-QPLENILAANGVNTVRQRVWVNPA-----DGNYNLDYNIAIAKRAKAAGLGVYIDFHY 82 (332)
T ss_dssp HHTTCCCBCTTSCB-CCHHHHHHHTTCCEEEEEECSSCT-----TCTTSHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred HHcCCEEECCCCCc-ccHHHHHHHCCCCEEEEeeeeCCC-----CCcCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 33444332223432 467889999999999886521121 12337899999999999999998888654
No 315
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=46.13 E-value=1.4e+02 Score=26.76 Aligned_cols=120 Identities=13% Similarity=0.173 Sum_probs=70.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .++
T Consensus 29 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~ 104 (303)
T 2wkj_A 29 LDKASLRRLVQFNIQQGIDGLYVGGST----GEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVGCVSTAESQQLAASAKR 104 (303)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECeec----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 788999999999999999998875532 332 344555555555542 24676665554 44555544 456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cC-CeeeEeEEeec-C--CCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AG-INVCSGGIIGL-G--EAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~G-i~v~~~~i~Gl-g--et~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .+ +++-..-+.+. | -+.+.+.++
T Consensus 105 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~~lPiilYn~P~~tg~~l~~~~~~~L 162 (303)
T 2wkj_A 105 YGFDAVSAVTPFY-------Y-PFSFEEHCDHYRAIIDSADGLPMVVYNIPALSGVKLTLDQINTL 162 (303)
T ss_dssp HTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHHTTCCEEEEECHHHHCCCCCHHHHHHH
T ss_pred CCCCEEEecCCCC-------C-CCCHHHHHHHHHHHHHhCCCCCEEEEeCccccCCCCCHHHHHHH
Confidence 6999887632211 1 1255666666665544 35 77554333333 3 355554444
No 316
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=46.02 E-value=1.7e+02 Score=26.83 Aligned_cols=97 Identities=7% Similarity=0.125 Sum_probs=53.7
Q ss_pred CCHHHHHHHHHHHHHc--CCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCC-CHHHHH-HHHHhccCe
Q 016599 122 MTKDAVMQAAQKAKEA--GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML-EKHQAI-ELKKAGLTA 197 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~--G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l-~~e~l~-~Lk~aG~~~ 197 (386)
.++++..+.++.+.+. ++..|-+.|. .....+ +.+.+.++..++.|+.+.++.|.. +++.+. .+...|.++
T Consensus 146 ~~~~~a~~~l~~a~~~~~~vvG~dL~g~--E~~~~~---~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~r 220 (343)
T 3rys_A 146 MSEDSALEVLDQLLAMHAPIAGIGLDSA--EVGNPP---SKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVER 220 (343)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCEEEEESC--CTTCCG---GGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSE
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEecCCc--ccCCCH---HHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCcce
Confidence 5666666666665543 3444545442 222222 334455556667787776666642 344443 344478888
Q ss_pred eecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE
Q 016599 198 YNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCS 237 (386)
Q Consensus 198 v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~ 237 (386)
+.+++...+ + -+.++.+++.|+.+..
T Consensus 221 IgHgv~l~~----------d----~~l~~~l~~~~i~le~ 246 (343)
T 3rys_A 221 IDHGIRCME----------D----TDVVQRLVAEQVPLTV 246 (343)
T ss_dssp EEECGGGGG----------C----HHHHHHHHHHTCCEEE
T ss_pred eeeeeeecC----------C----hHHHHHHHhcCCCeeE
Confidence 887765541 0 1346677777776543
No 317
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=45.96 E-value=83 Score=29.48 Aligned_cols=41 Identities=10% Similarity=0.034 Sum_probs=30.9
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
...+.++.++.+++.|+.+..+ + .++.--+...+.+...++
T Consensus 290 Git~~~~i~~~A~~~gi~~~~h-~---~es~i~~~a~l~laa~~~ 330 (392)
T 3p3b_A 290 GFTHWMELGEKLDAHGLRSAPH-C---YGNAYGIYASGHLSAAVR 330 (392)
T ss_dssp CHHHHHHHHHHHHHTTCEECCB-C---CSCTHHHHHHHHHGGGCT
T ss_pred CHHHHHHHHHHHHHcCCEEEec-C---CCCHHHHHHHHHHHHhCC
Confidence 6888899999999999987665 3 456556666777776664
No 318
>3vav_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics, seattle structural genomics center for infectious disease; 1.80A {Burkholderia thailandensis} SCOP: c.1.12.8 PDB: 3ez4_A
Probab=45.71 E-value=55 Score=29.31 Aligned_cols=67 Identities=19% Similarity=0.238 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCC--------------------
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML-------------------- 182 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l-------------------- 182 (386)
+++++.+-+..+.+.|+..|.|-++ .+..+.|+.+.+.|++++.+.|..
T Consensus 104 s~~~a~~~a~rl~kaGa~aVklEdg-----------~~~~~~i~~l~~~GIpv~gHlgltPq~~~~~gg~~vqgrt~~~a 172 (275)
T 3vav_A 104 TPADAFASAVKLMRAGAQMVKFEGG-----------EWLAETVRFLVERAVPVCAHVGLTPQSVHAFGGFKVQGKTEAGA 172 (275)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC-----------GGGHHHHHHHHHTTCCEEEEEESCGGGHHHHC---CCCCSHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCc-----------hhHHHHHHHHHHCCCCEEEecCCCceEEeccCCeEEEcCCHHHH
Q ss_pred --CHHHHHHHHHhccCeeec
Q 016599 183 --EKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 183 --~~e~l~~Lk~aG~~~v~i 200 (386)
.-+.++.+.+||++.+.+
T Consensus 173 ~~~i~rA~a~~eAGA~~ivl 192 (275)
T 3vav_A 173 AQLLRDARAVEEAGAQLIVL 192 (275)
T ss_dssp HHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEe
No 319
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=45.65 E-value=1.7e+02 Score=26.28 Aligned_cols=117 Identities=15% Similarity=0.158 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCC----------------CHHHHHHHH
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML----------------EKHQAIELK 191 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l----------------~~e~l~~Lk 191 (386)
.+.++.+.+.|++.+-+-+...+. ..+.....++++..+..|+.+....|.+ .++..+..+
T Consensus 93 ~e~i~~ai~~GFtSVMiDgS~~p~---eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~ 169 (288)
T 3q94_A 93 FEKCKEAIDAGFTSVMIDASHHPF---EENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVE 169 (288)
T ss_dssp HHHHHHHHHHTCSEEEECCTTSCH---HHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCeEEEeCCCCCH---HHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHH
Q ss_pred HhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEe--ecCCCHHHHHHHHH
Q 016599 192 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGII--GLGEAEEDRVGLLH 255 (386)
Q Consensus 192 ~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~--Glget~ed~~~~l~ 255 (386)
+.|+|.+.+++=+.--.|+. .+.-+++..-+.-+.+ .+.+++ |.|-.++++.+.+.
T Consensus 170 ~TgvD~LAvaiGt~HG~Y~~-~p~Ld~~~L~~I~~~v-------~vpLVlHGgSG~~~e~i~~ai~ 227 (288)
T 3q94_A 170 ATGIDCLAPALGSVHGPYKG-EPNLGFAEMEQVRDFT-------GVPLVLHGGTGIPTADIEKAIS 227 (288)
T ss_dssp HHCCSEEEECSSCBSSCCSS-SCCCCHHHHHHHHHHH-------CSCEEECCCTTCCHHHHHHHHH
T ss_pred HHCCCEEEEEcCcccCCcCC-CCccCHHHHHHHHHhc-------CCCEEEeCCCCCCHHHHHHHHH
No 320
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=45.63 E-value=1.7e+02 Score=26.26 Aligned_cols=188 Identities=10% Similarity=0.026 Sum_probs=98.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh-hhHHHHHHHHHHHh-hcCcEEEEecCC-CCHHHHHHHHHhccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK-TNFNQILEYVKDIR-DMGMEVCCTLGM-LEKHQAIELKKAGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~-~~~~~l~~~i~~ik-~~g~~i~~t~g~-l~~e~l~~Lk~aG~~~v 198 (386)
.+.|.+...++.+.+.+.. +.++... +.-. ..++.+..+++.+. +.+++++++... -+.+.+++..++|++++
T Consensus 26 ~n~e~~~avl~AAe~~~sP-vIlq~s~---~~~~y~g~~~~~~~v~~~a~~~~VPValHlDHg~~~e~i~~ai~~GFtSV 101 (286)
T 1gvf_A 26 HNAETIQAILEVCSEMRSP-VILAGTP---GTFKHIALEEIYALCSAYSTTYNMPLALHLDHHESLDDIRRKVHAGVRSA 101 (286)
T ss_dssp CSHHHHHHHHHHHHHHTCC-CEEEECT---THHHHSCHHHHHHHHHHHHHHTTSCBEEEEEEECCHHHHHHHHHTTCCEE
T ss_pred CCHHHHHHHHHHHHHhCCC-EEEECCh---hHHhhcCHHHHHHHHHHHHHhCCCcEEEEcCCCCCHHHHHHHHHcCCCeE
Confidence 4567777777777777654 4454321 0000 12466677776654 457776555332 36888888889999888
Q ss_pred ecccCch--HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeE--eEEeecCCCH---------HHHHHHHHHHhcCCCCCC
Q 016599 199 NHNLDTS--REFYSKIITTRSYDERLETLKHVREAGINVCS--GGIIGLGEAE---------EDRVGLLHTLATLPTHPE 265 (386)
Q Consensus 199 ~i~le~~--~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~--~~i~Glget~---------ed~~~~l~~l~~l~~~~~ 265 (386)
-++.-.. ++ +.+...+.++.+++.|+.|.. +.+-|..+.. -+..+..+|+++.+ ++
T Consensus 102 MiDgS~lp~ee---------Ni~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~Tg--vD 170 (286)
T 1gvf_A 102 MIDGSHFPFAE---------NVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTG--VD 170 (286)
T ss_dssp EECCTTSCHHH---------HHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHC--CS
T ss_pred EECCCCCCHHH---------HHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHC--CC
Confidence 7644322 11 233445677888999987654 4443321100 12355566777775 56
Q ss_pred eEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCcccc
Q 016599 266 SVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 332 (386)
Q Consensus 266 ~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~ 332 (386)
.+-+..=+-+.-.+ ..+.++.+.+.++-. ..+ ..+-+-+| -+...+.-..++..|+.-+
T Consensus 171 ~LAvaiGt~HG~Y~--~~p~Ld~~~L~~I~~----~~~-vpLVlHGg-SG~~~e~i~~ai~~Gv~Ki 229 (286)
T 1gvf_A 171 SLAVAIGTAHGLYS--KTPKIDFQRLAEIRE----VVD-VPLVLHGA-SDVPDEFVRRTIELGVTKV 229 (286)
T ss_dssp EEEECSSCCSSCCS--SCCCCCHHHHHHHHH----HCC-SCEEECCC-TTCCHHHHHHHHHTTEEEE
T ss_pred EEEeecCccccCcC--CCCccCHHHHHHHHH----hcC-CCEEEECC-CCCCHHHHHHHHHCCCeEE
Confidence 54443211111111 234556655433322 232 11212221 2333444466788888776
No 321
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=45.53 E-value=53 Score=31.50 Aligned_cols=43 Identities=5% Similarity=-0.163 Sum_probs=27.1
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
....+.++....+.+.|+.+..+... .++.=-+...+.+...+
T Consensus 326 GGit~~~~ia~~A~~~gi~~~~h~~~--~~s~Ig~aa~~hlaaa~ 368 (440)
T 3t6c_A 326 GGITPAKKIAIYSELNGVRTAWHSPG--DISPIGVCANMHLDLSS 368 (440)
T ss_dssp TSHHHHHHHHHHHHHTTCEECCCCSS--SSCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHcCCEEEeccCC--CccHHHHHHHHHHHHhC
Confidence 35778888888899999886554331 13433444556666555
No 322
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=45.45 E-value=49 Score=31.04 Aligned_cols=20 Identities=10% Similarity=0.087 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHcCCcEEEE
Q 016599 125 DAVMQAAQKAKEAGSTRFCM 144 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l 144 (386)
++..+.++.+.+.|+.-+.+
T Consensus 255 ~~~~~la~~le~~Gvd~i~v 274 (377)
T 2r14_A 255 AMAFYLAGELDRRGLAYLHF 274 (377)
T ss_dssp HHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEE
Confidence 34444444444444444444
No 323
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=45.35 E-value=1.7e+02 Score=26.27 Aligned_cols=120 Identities=15% Similarity=0.145 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHHH---HH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIEL---KK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~L---k~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++.. ++
T Consensus 34 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~st~~ai~la~~A~~ 109 (304)
T 3cpr_A 34 IDIAAGREVAAYLVDKGLDSLVLAGTT----GESPTTTAAEKLELLKAVREEVGDRAKLIAGVGTNNTRTSVELAEAAAS 109 (304)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHh
Confidence 788999999999999999998775532 232 334555555555442 24666665554 445554444 55
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEee---cCCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIG---LGEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~G---lget~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-.--+.+ ..-+.+.+.++
T Consensus 110 ~Gadavlv~~P~y-------~-~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 166 (304)
T 3cpr_A 110 AGADGLLVVTPYY-------S-KPSQEGLLAHFGAIAAATEVPICLYDIPGRSGIPIESDTMRRL 166 (304)
T ss_dssp TTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 6999887632111 1 1245666666666444 467754433332 23354444443
No 324
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=45.04 E-value=78 Score=22.27 Aligned_cols=64 Identities=14% Similarity=0.241 Sum_probs=40.8
Q ss_pred hHHHHHHHHhhcCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHhhcCCCeeEEEEeeeecCCCCC-cCCCCCCCC
Q 016599 36 AAAIEAERTIREGPRHDWSKDDIKSIYDSPVLDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCS-EDCSYCPQS 109 (386)
Q Consensus 36 ~~~~~~~~~~~~~~~~~ls~ee~~~l~~~~~~~~l~~aa~~~r~~~~g~~v~~~~~i~i~t~~C~-~~C~fC~~~ 109 (386)
.+.+|++.+.. ....+.+|+...|+.+..-.-.-.....++.+ +.- +......|. -.|..|+..
T Consensus 3 ~L~~Il~~L~~---~g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~----l~R---~~~~GgaC~~g~C~~C~~~ 67 (78)
T 1xn7_A 3 SLIQVRDLLAL---RGRMEAAQISQTLNTPQPMINAMLQQLESMGK----AVR---IQEEPDGCLSGSCKSCPEG 67 (78)
T ss_dssp CHHHHHHHHHH---SCSBCHHHHHHHTTCCHHHHHHHHHHHHHHTS----EEE---ECCCCCCCCCSSCCCCCCC
T ss_pred hHHHHHHHHHH---cCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCC----EEE---ecCcCCCCCCCCCCCCCCC
Confidence 46789999988 88999999999998654333333333333332 211 100156886 579999865
No 325
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=45.04 E-value=1.4e+02 Score=25.26 Aligned_cols=186 Identities=10% Similarity=0.031 Sum_probs=0.0
Q ss_pred CCCCHH--HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCC--------CCHHHHHH
Q 016599 120 KLMTKD--AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM--------LEKHQAIE 189 (386)
Q Consensus 120 ~~~s~e--eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~--------l~~e~l~~ 189 (386)
+..+++ ++.+.++.+.+.|+..+.+.+ ...++.++..-...+-.....+. .+.+.++.
T Consensus 29 p~~~~~~~~~~~~a~~~~~~G~~~i~~~~------------~~~i~~i~~~~~~p~i~~~~~~~~~~~~~i~~~~~~i~~ 96 (234)
T 1yxy_A 29 PLYSETGGIMPLMAKAAQEAGAVGIRANS------------VRDIKEIQAITDLPIIGIIKKDYPPQEPFITATMTEVDQ 96 (234)
T ss_dssp TTCCTTCCSHHHHHHHHHHHTCSEEEEES------------HHHHHHHHTTCCSCEEEECBCCCTTSCCCBSCSHHHHHH
T ss_pred CCcCCccchHHHHHHHHHHCCCcEeecCC------------HHHHHHHHHhCCCCEEeeEcCCCCccccccCChHHHHHH
Q ss_pred HHHhccCeeecccCchHHHHhhhCCCCCH--HHHHHHHHHHHHc--CCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCC
Q 016599 190 LKKAGLTAYNHNLDTSREFYSKIITTRSY--DERLETLKHVREA--GINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPE 265 (386)
Q Consensus 190 Lk~aG~~~v~i~le~~~~~~~~i~~~~s~--~~~l~~i~~a~~~--Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~ 265 (386)
+.++|++.+.++.+. ...+ +...+.++.+++. +..+..++ .|.++ +..+.+.+ ++
T Consensus 97 ~~~~Gad~V~l~~~~----------~~~~~~~~~~~~i~~i~~~~~~~~v~~~~-----~t~~e----a~~a~~~G--ad 155 (234)
T 1yxy_A 97 LAALNIAVIAMDCTK----------RDRHDGLDIASFIRQVKEKYPNQLLMADI-----STFDE----GLVAHQAG--ID 155 (234)
T ss_dssp HHTTTCSEEEEECCS----------SCCTTCCCHHHHHHHHHHHCTTCEEEEEC-----SSHHH----HHHHHHTT--CS
T ss_pred HHHcCCCEEEEcccc----------cCCCCCccHHHHHHHHHHhCCCCeEEEeC-----CCHHH----HHHHHHcC--CC
Q ss_pred eE--eeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccC-hhHHHhhhhcCccccccCCccccCC
Q 016599 266 SV--PINALLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFS-MPEQALCFLAGANSIFTGEKLLTTP 342 (386)
Q Consensus 266 ~v--~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~-~~~~~~~l~~Gan~~~~g~~~~t~~ 342 (386)
.+ .+..+.| ++ .....+..+.+.++... +..+-..+ ++. .+.....+.+||+.++.|..+..
T Consensus 156 ~i~~~v~g~~~--~~--~~~~~~~~~~i~~~~~~------~ipvia~G---GI~s~~~~~~~~~~Gad~v~vGsal~~-- 220 (234)
T 1yxy_A 156 FVGTTLSGYTP--YS--RQEAGPDVALIEALCKA------GIAVIAEG---KIHSPEEAKKINDLGVAGIVVGGAITR-- 220 (234)
T ss_dssp EEECTTTTSST--TS--CCSSSCCHHHHHHHHHT------TCCEEEES---CCCSHHHHHHHHTTCCSEEEECHHHHC--
T ss_pred EEeeeccccCC--CC--cCCCCCCHHHHHHHHhC------CCCEEEEC---CCCCHHHHHHHHHCCCCEEEEchHHhC--
Q ss_pred CCChhHHHHHHHHc
Q 016599 343 NNDFDADQLMFKVL 356 (386)
Q Consensus 343 ~~~~~~~~~~i~~~ 356 (386)
+.+..+.+.++
T Consensus 221 ---p~~~~~~l~~~ 231 (234)
T 1yxy_A 221 ---PKEIAERFIEA 231 (234)
T ss_dssp ---HHHHHHHHHHH
T ss_pred ---hHHHHHHHHHH
No 326
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=45.00 E-value=54 Score=29.23 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=24.8
Q ss_pred HHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 160 QILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 160 ~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.+.++++.+|+. ..++++-.|..+++.++....+|.|.+-++
T Consensus 195 ~~~~~v~~vr~~~~~Pv~vGfGIst~e~~~~~~~~gADgvIVG 237 (271)
T 3nav_A 195 PVHALLERLQQFDAPPALLGFGISEPAQVKQAIEAGAAGAISG 237 (271)
T ss_dssp HHHHHHHHHHHTTCCCEEECSSCCSHHHHHHHHHTTCSEEEES
T ss_pred hHHHHHHHHHHhcCCCEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 455555565543 445556566666666665556666666654
No 327
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=44.94 E-value=66 Score=28.02 Aligned_cols=75 Identities=13% Similarity=0.066 Sum_probs=44.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHH-HHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILE-YVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~-~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
++.+++...++.+.+.|.+-|--.+|..+..|- ..+++.- .++++- ++.+-..-|..+.+.+..|.++|.+++-.
T Consensus 145 L~~e~i~~a~ria~eaGADfVKTsTG~~~~~gA--t~~dv~l~~m~~~v--~v~VKaaGGirt~~~al~~i~aGa~RiG~ 220 (234)
T 1n7k_A 145 WDDKTLSLLVDSSRRAGADIVKTSTGVYTKGGD--PVTVFRLASLAKPL--GMGVKASGGIRSGIDAVLAVGAGADIIGT 220 (234)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEESCCSSSCCCCS--HHHHHHHHHHHGGG--TCEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCC--CHHHHHHHHHHHHH--CCCEEEecCCCCHHHHHHHHHcCccccch
Confidence 456888888888888888766555443221221 2222111 022221 25666677777788888888899886654
No 328
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=44.80 E-value=31 Score=32.57 Aligned_cols=110 Identities=10% Similarity=0.078 Sum_probs=56.6
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
++++-++.++.+++ .|-. .+.+-. + .-...++..++++.+.+.++.. .-....-+.+.+++|++.- .++
T Consensus 201 ~~~~d~~~v~avR~a~G~~~~l~vDa--N----~~~~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iP 272 (390)
T 3ugv_A 201 DPAVDIETAEAVWDAVGRDTALMVDF--N----QGLDMAEAMHRTRQIDDLGLEWIEEPVVYDNFDGYAQLRHDL--KTP 272 (390)
T ss_dssp SHHHHHHHHHHHHHHHCTTSEEEEEC--T----TCCCHHHHHHHHHHHTTSCCSEEECCSCTTCHHHHHHHHHHC--SSC
T ss_pred CHHHHHHHHHHHHHHhCCCCEEEEEC--C----CCCCHHHHHHHHHHHHhhCCCEEECCCCcccHHHHHHHHHhc--CCC
Confidence 45555555665554 3432 333321 1 1134566777777777766542 2111223566677776641 233
Q ss_pred cc----cCchHHHHhhhCC------------CCCHHHHHHHHHHHHHcCCeeeEeEE
Q 016599 200 HN----LDTSREFYSKIIT------------TRSYDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 200 i~----le~~~~~~~~i~~------------~~s~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
+. +.+..+..+.+.. -....+.++....+++.|+.+..+.+
T Consensus 273 Ia~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i~~~A~~~gi~~~~h~~ 329 (390)
T 3ugv_A 273 LMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGWMRAAGVAGAWGIPMSTHLY 329 (390)
T ss_dssp EEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHHHHHHHHHHHHTCCBCCBSC
T ss_pred EEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEeecCH
Confidence 32 2222222222211 12367888888899999998765543
No 329
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=44.78 E-value=91 Score=27.88 Aligned_cols=95 Identities=18% Similarity=0.191 Sum_probs=58.2
Q ss_pred hhhHHHHHHHHHHHhhcCcEEE---EecCC---CCHHHHHHHHHhccCeee---cccCchHHHHhhhCCCCCHHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVC---CTLGM---LEKHQAIELKKAGLTAYN---HNLDTSREFYSKIITTRSYDERLETL 225 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~---~t~g~---l~~e~l~~Lk~aG~~~v~---i~le~~~~~~~~i~~~~s~~~~l~~i 225 (386)
..+++.+.++++.+-+.|+... -|.|. ++.+.-+++.+.-++.+. .++ ...+.++.++..
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~gViaGv-----------g~~~t~~ai~la 84 (288)
T 2nuw_A 16 KVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTHKLIFQV-----------GSLNLNDVMELV 84 (288)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCSCEEEEC-----------CCSCHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCeEEee-----------CCCCHHHHHHHH
Confidence 3677888888888777777632 23443 566555555444333221 121 234778888888
Q ss_pred HHHHHcCCe-eeEeEEeecC-CCHHHHHHHHHHHhcC
Q 016599 226 KHVREAGIN-VCSGGIIGLG-EAEEDRVGLLHTLATL 260 (386)
Q Consensus 226 ~~a~~~Gi~-v~~~~i~Glg-et~ed~~~~l~~l~~l 260 (386)
+.+.++|.. +-+...+-.. -+.+++.++++.+.+-
T Consensus 85 ~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 121 (288)
T 2nuw_A 85 KFSNEMDILGVSSHSPYYFPRLPEKFLAKYYEEIARI 121 (288)
T ss_dssp HHHHTSCCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 888888876 3222222224 5889999998887653
No 330
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=44.73 E-value=76 Score=29.25 Aligned_cols=22 Identities=14% Similarity=0.241 Sum_probs=11.5
Q ss_pred CHHHHHHHHHHHHHcCCcEEEE
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCM 144 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l 144 (386)
+++.+.+.++.+.+.|+..|.+
T Consensus 147 ~~e~~~~ia~~~~~~Ga~~i~l 168 (345)
T 1nvm_A 147 PAEKLAEQGKLMESYGATCIYM 168 (345)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEE
Confidence 4455555555555555555544
No 331
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=44.67 E-value=47 Score=31.05 Aligned_cols=127 Identities=12% Similarity=0.049 Sum_probs=67.9
Q ss_pred CHHHHHHHHHHHHHc-CCc-EEEEecccCCCCCChhh-HHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKEA-GST-RFCMGAAWRDTIGRKTN-FNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~~-G~~-~v~l~~g~~~~~ge~~~-~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
++++-++.++.+++. |-. .+.+-. + .... .++..++++.+.+.++.. .-....-+.+.++.+++.- .+
T Consensus 175 ~~~~d~~~v~avR~a~g~~~~l~vDa--n----~~~~d~~~A~~~~~~l~~~~i~~iEqP~~~~~~~~~~~l~~~~--~i 246 (374)
T 3sjn_A 175 DPDTDYAIVKAVREAAGPEMEVQIDL--A----SKWHTCGHSAMMAKRLEEFNLNWIEEPVLADSLISYEKLSRQV--SQ 246 (374)
T ss_dssp CHHHHHHHHHHHHHHHCSSSEEEEEC--T----TTTCSHHHHHHHHHHSGGGCCSEEECSSCTTCHHHHHHHHHHC--SS
T ss_pred CHHHHHHHHHHHHHHhCCCCeEEEEC--C----CCCCCHHHHHHHHHHhhhcCceEEECCCCcccHHHHHHHHhhC--CC
Confidence 466666666666653 533 333321 1 1134 567777777777766542 2111223566677776641 23
Q ss_pred eccc-Cc---hHHHHhh--------hC----CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 199 NHNL-DT---SREFYSK--------II----TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 199 ~i~l-e~---~~~~~~~--------i~----~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
++.. |+ ..+..+. +. +-....+.++....+.+.|+.+..+.+ ++.=-+...+++...++
T Consensus 247 PIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~h~~----~~~i~~aa~~hlaaa~~ 321 (374)
T 3sjn_A 247 KIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEMKKIYDIAQMNGTQLIPHGF----STGILLHASVHFLAACE 321 (374)
T ss_dssp EEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHHHHHHHHHHHHTCEECCBCC----SCHHHHHHHHHHHHTCT
T ss_pred CEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHHHHHHHHHcCCEEEecCC----CcHHHHHHHHHHHHhCC
Confidence 3322 22 1111111 11 123578889999999999998766554 24334555666666664
No 332
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=44.66 E-value=1.8e+02 Score=26.35 Aligned_cols=65 Identities=12% Similarity=0.143 Sum_probs=42.4
Q ss_pred CCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC------------------CCCHHHHHHHHHhccCeee
Q 016599 138 GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG------------------MLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 138 G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g------------------~l~~e~l~~Lk~aG~~~v~ 199 (386)
|++.+-+-+... ++ ..++....++++..+..|+.+....| .-+++.+.++.+.|+|.+.
T Consensus 113 GFtSVMiDgS~~-p~--eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv~TgvD~LA 189 (306)
T 3pm6_A 113 GFDSIMVDMSHF-SK--EENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFVATGINWLA 189 (306)
T ss_dssp CCSEEEECCTTS-CH--HHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHHTTTCSEEC
T ss_pred CCCEEEEeCCCC-CH--HHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHHHcCCCEEE
Confidence 888887755432 11 24566677777777766665432211 2367888888889999988
Q ss_pred cccCch
Q 016599 200 HNLDTS 205 (386)
Q Consensus 200 i~le~~ 205 (386)
+++=+.
T Consensus 190 vaiGt~ 195 (306)
T 3pm6_A 190 PAFGNV 195 (306)
T ss_dssp CCSSCC
T ss_pred EEcCcc
Confidence 877554
No 333
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=44.52 E-value=48 Score=31.08 Aligned_cols=99 Identities=13% Similarity=0.166 Sum_probs=53.0
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc----CchHHHHhhhC------------CCCCHH
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL----DTSREFYSKII------------TTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l----e~~~~~~~~i~------------~~~s~~ 219 (386)
..++..++++.+.+.++. +.-....-+.+.+..|++.- .+++.. .+..+..+.+. +-....
T Consensus 206 ~~~~A~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit 283 (382)
T 3dgb_A 206 DEAVALRACRILGGNGIDLIEQPISRNNRAGMVRLNASS--PAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPR 283 (382)
T ss_dssp CHHHHHHHHHHHHTTTCCCEECCBCTTCHHHHHHHHHHC--SSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred CHHHHHHHHHHHhhcCcCeeeCCCCccCHHHHHHHHHhC--CCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHH
Confidence 456677777777766654 22111223566677776641 233322 22212222111 113577
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.++....+.+.|+.+..+.++ ++.=-+...+.++..+
T Consensus 284 ~~~~i~~~A~~~gi~~~~~~~~---es~ig~aa~~hlaaa~ 321 (382)
T 3dgb_A 284 ATLRTAAIAEAAGIGLYGGTML---EGGIGTLASAHAFLTL 321 (382)
T ss_dssp HHHHHHHHHHHHTCEEEECCSC---CCHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHcCCeEeecCCC---ccHHHHHHHHHHHHcC
Confidence 8888888999999987554333 4444455566666555
No 334
>3ijd_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; HET: C2F; 2.00A {Clostridium thermocellum atcc 27405}
Probab=44.50 E-value=80 Score=28.85 Aligned_cols=115 Identities=9% Similarity=0.037 Sum_probs=59.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCC--hhhHHHHHHHHHHHhh-cCcEEEEecCC-----CCHHHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGR--KTNFNQILEYVKDIRD-MGMEVCCTLGM-----LEKHQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge--~~~~~~l~~~i~~ik~-~g~~i~~t~g~-----l~~e~l~~Lk~a 193 (386)
++.+++.+.+..+...|+..+ |.| .++.+. +..+.+..++++.... ..+-+..++.. .+-+.+++=.++
T Consensus 101 ~t~~ei~~~L~~~~~~GI~ni-LRG--Dpp~~~~~~~~~~~A~~l~~~~~~~F~IGvA~yPe~H~~~~~d~~~Lk~KvdA 177 (315)
T 3ijd_A 101 YTPDEFRRLTRPVSGQDAFSV-FVG--AASRNQSVLLKLSDAYKIRQDVNPDLLLGGVAIPERHMKNTDEHLRIIDKINK 177 (315)
T ss_dssp SCHHHHHHHHSCCTTCCCEEE-EEC--CCC----CCSCHHHHHHHHHHHCTTSEEEEEECGGGHHHHSCHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCcEE-ecC--CCCCCCCCCcCHHHHHHHHHhcCCCEEEEEEECCCCCCCHHHHHHHHHHHHHC
Confidence 578999999999999999876 444 233332 2346677777654432 22233333321 233344444568
Q ss_pred ccCeeecccCch-HHHHhhhCCCCCHHHHHHHH-HHHHHcCCeeeEeEEeec--CCCHHHH
Q 016599 194 GLTAYNHNLDTS-REFYSKIITTRSYDERLETL-KHVREAGINVCSGGIIGL--GEAEEDR 250 (386)
Q Consensus 194 G~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i-~~a~~~Gi~v~~~~i~Gl--get~ed~ 250 (386)
|++.+---+ -+ .+ .+.++++.+ +.++++|+. .+-++.|+ -.+...+
T Consensus 178 GAdf~ITQ~-ffD~e---------~~~~f~~~~~~~~r~~Gi~-~vPIipGImPi~s~k~~ 227 (315)
T 3ijd_A 178 GCKYFITQA-VYNVE---------AAKDFLSDYYYYSKNNNLK-MVPIIFTLTPCGSTKTL 227 (315)
T ss_dssp TCCEEEESC-CCCHH---------HHHHHHHHHHHHHHHTTBC-CCCEEEEECCCCSHHHH
T ss_pred CCCEEEccc-cCCHH---------HHHHHHHHHHHHHHHCCCC-CCcEEEEeeecCCHHHH
Confidence 988654210 01 11 122333333 467888882 23344444 3455554
No 335
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=44.49 E-value=1.4e+02 Score=27.85 Aligned_cols=167 Identities=13% Similarity=0.039 Sum_probs=0.0
Q ss_pred HHHHHHHHHHhhcCcEEEEecCC-CCHHHHHHHHHhccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeee
Q 016599 159 NQILEYVKDIRDMGMEVCCTLGM-LEKHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVC 236 (386)
Q Consensus 159 ~~l~~~i~~ik~~g~~i~~t~g~-l~~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~ 236 (386)
+.+.++++++++.++.+.+..+. ...+..+.+.++|++.+.+..... .+ ...+..+|+++.+..+.. ++++-
T Consensus 142 ~~~~~~i~~~~~~g~~v~~~v~~~~~~e~a~~~~~agad~i~i~~~~~~~~---~~~~~~~~~~i~~l~~~~---~~pvi 215 (393)
T 2qr6_A 142 ELLSERIAQVRDSGEIVAVRVSPQNVREIAPIVIKAGADLLVIQGTLISAE---HVNTGGEALNLKEFIGSL---DVPVI 215 (393)
T ss_dssp HHHHHHHHHHHHTTSCCEEEECTTTHHHHHHHHHHTTCSEEEEECSSCCSS---CCCC-----CHHHHHHHC---SSCEE
T ss_pred HHHHHHHHHHhhcCCeEEEEeCCccHHHHHHHHHHCCCCEEEEeCCccccc---cCCCcccHHHHHHHHHhc---CCCEE
Q ss_pred EeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHHHh---CCCc-ceeecCc
Q 016599 237 SGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATARIV---MPKA-MVRLSAG 312 (386)
Q Consensus 237 ~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~---lp~~-~i~i~~g 312 (386)
. |-..+.++ +..+.+.| ++.+.+ ..-+..+..+.....++...+.++....+.+ .... +.-+..|
T Consensus 216 ~----ggi~t~e~----a~~~~~~G--ad~i~v-g~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~G 284 (393)
T 2qr6_A 216 A----GGVNDYTT----ALHMMRTG--AVGIIV-GGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADG 284 (393)
T ss_dssp E----ECCCSHHH----HHHHHTTT--CSEEEE-SCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECS
T ss_pred E----CCcCCHHH----HHHHHHcC--CCEEEE-CCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEEC
Q ss_pred ccccChhHHHhhhhcCccccccCCccccCCC
Q 016599 313 RVRFSMPEQALCFLAGANSIFTGEKLLTTPN 343 (386)
Q Consensus 313 ~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~ 343 (386)
-+.-..+. ..++..||+.++.|..++.+..
T Consensus 285 GI~~~~dv-~kalalGA~~V~iG~~~l~~~e 314 (393)
T 2qr6_A 285 SIENSGDV-VKAIACGADAVVLGSPLARAEE 314 (393)
T ss_dssp SCCSHHHH-HHHHHHTCSEEEECGGGGGSTT
T ss_pred CCCCHHHH-HHHHHcCCCEEEECHHHHcCCC
No 336
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=44.47 E-value=47 Score=31.11 Aligned_cols=41 Identities=15% Similarity=0.041 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
...+.++....+.+.|+.+..+.++ ++.=-+...+.+...+
T Consensus 273 Git~~~~ia~~A~~~g~~~~~~~~~---es~i~~aa~~hlaaa~ 313 (378)
T 3eez_A 273 GLTRAARMRDIALTHGIDMFVMATG---GSVLADAEALHLAATI 313 (378)
T ss_dssp SHHHHHHHHHHHHHTTCEEEEECSS---CSHHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHHcCCEEEcCCCC---CCHHHHHHHHHHHHhC
Confidence 5778888899999999987765554 3433445556666655
No 337
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=44.44 E-value=1.5e+02 Score=26.60 Aligned_cols=113 Identities=16% Similarity=0.237 Sum_probs=59.4
Q ss_pred HHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC-----------------CCCHHHHHHHH-Hh
Q 016599 132 QKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG-----------------MLEKHQAIELK-KA 193 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g-----------------~l~~e~l~~Lk-~a 193 (386)
+.+.+.|++.+-+-++.. ++ ..+.+...++++..+..|+.+....| .-+++.+.++. +.
T Consensus 91 ~~ai~~GFtSVMiDgS~l-p~--eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~T 167 (286)
T 1gvf_A 91 RRKVHAGVRSAMIDGSHF-PF--AENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELT 167 (286)
T ss_dssp HHHHHTTCCEEEECCTTS-CH--HHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHH
T ss_pred HHHHHcCCCeEEECCCCC-CH--HHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHH
Confidence 344567999987755422 21 24566677777777766654321111 13466666664 68
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHH
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLL 254 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l 254 (386)
|+|.+.+++=+.--.|+. .+.-+++ +++.|+.. .++++ ++-|- |-.++++.+.+
T Consensus 168 gvD~LAvaiGt~HG~Y~~-~p~Ld~~-~L~~I~~~--~~vpL---VlHGgSG~~~e~i~~ai 222 (286)
T 1gvf_A 168 GVDSLAVAIGTAHGLYSK-TPKIDFQ-RLAEIREV--VDVPL---VLHGASDVPDEFVRRTI 222 (286)
T ss_dssp CCSEEEECSSCCSSCCSS-CCCCCHH-HHHHHHHH--CCSCE---EECCCTTCCHHHHHHHH
T ss_pred CCCEEEeecCccccCcCC-CCccCHH-HHHHHHHh--cCCCE---EEECCCCCCHHHHHHHH
Confidence 999998877665222321 2233554 33333332 23332 22233 55667665553
No 338
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=44.36 E-value=1.4e+02 Score=29.55 Aligned_cols=116 Identities=12% Similarity=0.215 Sum_probs=57.9
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c----CcEEEEec--CCCCHHHHHHHHHhcc
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M----GMEVCCTL--GMLEKHQAIELKKAGL 195 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~----g~~i~~t~--g~l~~e~l~~Lk~aG~ 195 (386)
+++.+++.++.+.+.|++.|+|.-- .=...| ..+.++++.+++ . .+.+++++ |.-....+..+ ++|+
T Consensus 173 ~~e~~~~~a~~l~~~Gad~I~L~DT--~G~~~P---~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAv-eAGa 246 (539)
T 1rqb_A 173 TVEGYVKLAGQLLDMGADSIALKDM--AALLKP---QPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAI-EAGV 246 (539)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEET--TCCCCH---HHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHH-HTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCC--CCCcCH---HHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHH-HhCC
Confidence 6777788888888888877776310 001223 334444444432 2 23344443 43334444433 5788
Q ss_pred CeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 196 TAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 196 ~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.|..++.++ +. .+.-+.+.++..++ ..|+.+ |-+.+.+.++.+++.++
T Consensus 247 ~~VD~ti~g~Ger-----tGN~~lE~lv~~L~---~~g~~t--------gidl~~L~~is~~v~~~ 296 (539)
T 1rqb_A 247 DVVDTAISSMSLG-----PGHNPTESVAEMLE---GTGYTT--------NLDYDRLHKIRDHFKAI 296 (539)
T ss_dssp SEEEEBCGGGCST-----TSBCBHHHHHHHTT---TSSEEC--------CCCHHHHHHHHHHHHHH
T ss_pred CEEEEeccccCCC-----ccChhHHHHHHHHH---hcCCCc--------hhhHHHHHHHHHHHHHH
Confidence 8887766554 21 11224554443332 233322 33556666666555443
No 339
>4hty_A Cellulase; (alpha/beta)8 barrel, family 5 endoglucanase, hydrolase; 2.00A {Uncultured bacterium} PDB: 4hu0_A*
Probab=44.26 E-value=1.5e+02 Score=27.17 Aligned_cols=128 Identities=8% Similarity=-0.065 Sum_probs=67.8
Q ss_pred CCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEE--eecC----------CCH
Q 016599 180 GMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGI--IGLG----------EAE 247 (386)
Q Consensus 180 g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i--~Glg----------et~ 247 (386)
|...++.++.|++.|++.|-+.+.-. .+........++.+-+.++.|.+.||.|-.++- -|.. .+.
T Consensus 84 g~~~~~di~~ik~~G~N~VRi~~~~~--~~~~~~~~~~l~~ld~~v~~a~~~Gi~Vild~H~~~~~~~~~~~~~~~~~~~ 161 (359)
T 4hty_A 84 KRFSKKHFEVIRSWGANVVRVPVHPR--AWKERGVKGYLELLDQVVAWNNELGIYTILDWHSIGNLKSEMFQNNSYHTTK 161 (359)
T ss_dssp TCCSHHHHHHHHHTTCSEEEEEECHH--HHHHHHHHHHHHHHHHHHHHHHHTTCEEEEEECCEEETTTTEESSGGGCCCH
T ss_pred CCcCHHHHHHHHhcCCCEEEEeccHH--HhhccCCHHHHHHHHHHHHHHHHCCCEEEEEcCCCCCCCcccccCCcchhHH
Confidence 33457889999999999887754321 111110112345556788999999998655432 2210 245
Q ss_pred HHHHHHHHHH-hcCCCCCCeEeeeeeeecCCCCCCCCCCCCHH----HHHHHHHHHHHhCCCcceeec
Q 016599 248 EDRVGLLHTL-ATLPTHPESVPINALLAVKGTPLQDQKPVEIW----EMIRMIATARIVMPKAMVRLS 310 (386)
Q Consensus 248 ed~~~~l~~l-~~l~~~~~~v~~~~f~P~~gT~l~~~~~~s~~----e~~~~~a~~R~~lp~~~i~i~ 310 (386)
+...+.++.+ .+++.++..+.+..+. .|...-......+.. -+.+++...|..-|+..+.+.
T Consensus 162 ~~~~~~~~~la~ryk~~p~Vi~~el~N-EP~~~~~~~~~~~~~~~~~~~~~~~~~IR~~dp~~~I~v~ 228 (359)
T 4hty_A 162 GETFDFWRRVSERYNGINSVAFYEIFN-EPTVFNGRLGIATWAEWKAINEEAITIIQAHNPKAIALVA 228 (359)
T ss_dssp HHHHHHHHHHHHHTTTCTTEEEEESCS-EECCGGGTTCCCCHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEecc-CCCCCCCCcCCCCHHHHHHHHHHHHHHHHHhCCCcEEEEc
Confidence 6666666655 4454334333444333 121110011122322 233456677888887655554
No 340
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=44.18 E-value=45 Score=31.07 Aligned_cols=126 Identities=10% Similarity=0.095 Sum_probs=64.9
Q ss_pred CHHHHHHHHHHHHHc-CCcEEEEecccCCCCCChhhHHHHHHHHHHH--hhcCcEE-EEecCCCCHHHHHHHHHhccCee
Q 016599 123 TKDAVMQAAQKAKEA-GSTRFCMGAAWRDTIGRKTNFNQILEYVKDI--RDMGMEV-CCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 123 s~eeI~~~~~~~~~~-G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~i--k~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
++++-++.++.+.+. +-..+.+-. +.....++..++++.+ .+.++.. .-....-+.+.+.+|++.- .+
T Consensus 170 ~~~~d~~~v~avr~~~~~~~l~vDa------N~~~~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~--~i 241 (365)
T 3ik4_A 170 DVAYDLARLRAIHQAAPTAPLIVDG------NCGYDVERALAFCAACKAESIPMVLFEQPLPREDWAGMAQVTAQS--GF 241 (365)
T ss_dssp CHHHHHHHHHHHHHHSSSCCEEEEC------TTCCCHHHHHHHHHHHHHTTCCEEEEECCSCTTCHHHHHHHHHHS--SS
T ss_pred CHHHHHHHHHHHHHhCCCCeEEEEC------CCCCCHHHHHHHHHHHhhCCCCceEEECCCCcccHHHHHHHHhhC--CC
Confidence 355555556555542 322333321 1113456677777777 5555542 2112223566677776642 23
Q ss_pred eccc----CchHHHHhhh------------CCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 199 NHNL----DTSREFYSKI------------ITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 199 ~i~l----e~~~~~~~~i------------~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
++.. .+..+..+.+ .+ ....+.++.++.+++.|+.+..+.++ |+.=-+...+.+...+
T Consensus 242 pIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~-GGit~~~~i~~~A~~~gi~~~~~~~~---es~ig~aa~~hlaaa~ 315 (365)
T 3ik4_A 242 AVAADESARSAHDVLRIAREGTASVINIKLMK-AGVAEGLKMIAIAQAAGLGLMIGGMV---ESILAMSFSANLAAGN 315 (365)
T ss_dssp CEEESTTCSSHHHHHHHHHHTCCSEEEECHHH-HCHHHHHHHHHHHHHHTCEEEECCSS---CCHHHHHHHHHHHHHH
T ss_pred CEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc-cCHHHHHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHHHHHhC
Confidence 3322 1222222211 12 45788888889999999987766554 4443445556666555
No 341
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=44.18 E-value=1.1e+02 Score=28.31 Aligned_cols=75 Identities=15% Similarity=0.166 Sum_probs=47.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC--C------CCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD--T------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~--~------~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
.+++++ +.+.+.|++.+.++.+... + .|.| .+..+.++.+..++.++++...-|..+.+.+.+...+
T Consensus 154 ~t~e~A----~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p-~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~ 228 (361)
T 3khj_A 154 VTEEAT----KELIENGADGIKVGIGPGSICTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV 228 (361)
T ss_dssp CSHHHH----HHHHHTTCSEEEECSSCCTTCCHHHHTCBCCC-HHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHH
T ss_pred CCHHHH----HHHHHcCcCEEEEecCCCcCCCcccccCCCCC-cHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHc
Confidence 455543 4556789988877321110 0 0112 3344444444444568888888898888888888889
Q ss_pred ccCeeecc
Q 016599 194 GLTAYNHN 201 (386)
Q Consensus 194 G~~~v~i~ 201 (386)
|.+.+.++
T Consensus 229 GAd~V~vG 236 (361)
T 3khj_A 229 GASSVMIG 236 (361)
T ss_dssp TCSEEEES
T ss_pred CCCEEEEC
Confidence 99998864
No 342
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=43.89 E-value=31 Score=32.67 Aligned_cols=99 Identities=8% Similarity=0.057 Sum_probs=53.1
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhhhCC------------CCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKIIT------------TRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~i~~------------~~s~~ 219 (386)
..++..++++.+.+.++.. .-....-+.+.+++|++.- .+++.. |.. .+..+.+.. -....
T Consensus 222 ~~~~a~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 299 (410)
T 2qq6_A 222 DIPSSIRFARAMEPFGLLWLEEPTPPENLDALAEVRRST--STPICAGENVYTRFDFRELFAKRAVDYVMPDVAKCGGLA 299 (410)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHTTC--SSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHH
T ss_pred CHHHHHHHHHHHhhcCCCeEECCCChhhHHHHHHHHhhC--CCCEEeCCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4567777777777776652 2111223566677776541 233321 221 222222211 12467
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.+++.|+.+..+.+. +.=-+...+.+...++
T Consensus 300 e~~~ia~~A~~~g~~~~~h~~~----s~i~~aa~~hlaaa~~ 337 (410)
T 2qq6_A 300 EAKRIANLAELDYIPFAPHNVS----SPVGTVAAAHVCAAVS 337 (410)
T ss_dssp HHHHHHHHHHTTTCCBCCBCCS----CHHHHHHHHHHHHSCT
T ss_pred HHHHHHHHHHHcCCeEeecCCC----cHHHHHHHHHHHHhCC
Confidence 7788888888999886665442 3334455566666553
No 343
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=43.63 E-value=1e+02 Score=28.59 Aligned_cols=70 Identities=14% Similarity=0.061 Sum_probs=42.3
Q ss_pred HHHHHHcCCcEEEEeccc-CCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAW-RDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~-~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.|.+.+.+ ....+.+...+.+.++.+.+.. .+++..+-|..+.+.+.++..+|++.+.++
T Consensus 239 a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~-~ipvia~GGI~~~~D~~k~l~~GAdaV~iG 309 (370)
T 1gox_A 239 ARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQG-RIPVFLDGGVRRGTDVFKALALGAAGVFIG 309 (370)
T ss_dssp HHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTT-SSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCC-CCEEEEECCCCCHHHHHHHHHcCCCEEeec
Confidence 345567788888774422 2111212233334443333321 477888888888877777777999999885
No 344
>1o4u_A Type II quinolic acid phosphoribosyltransferase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.50A {Thermotoga maritima} SCOP: c.1.17.1 d.41.2.1
Probab=43.24 E-value=21 Score=32.30 Aligned_cols=61 Identities=15% Similarity=0.203 Sum_probs=40.9
Q ss_pred HHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++++.+.|++.+.+-. ...+.+.+.++.++.. .+.+..+-| ++.+.++.+.+.|+|.|.++
T Consensus 206 a~eA~~aGaD~I~LDn---------~~~e~l~~av~~l~~~~~~v~ieASGG-It~eni~~~a~tGVD~IsvG 268 (285)
T 1o4u_A 206 ALRAVEAGADIVMLDN---------LSPEEVKDISRRIKDINPNVIVEVSGG-ITEENVSLYDFETVDVISSS 268 (285)
T ss_dssp HHHHHHTTCSEEEEES---------CCHHHHHHHHHHHHHHCTTSEEEEEEC-CCTTTGGGGCCTTCCEEEEG
T ss_pred HHHHHHcCCCEEEECC---------CCHHHHHHHHHHhhccCCCceEEEECC-CCHHHHHHHHHcCCCEEEEe
Confidence 3344557887665532 2345666666666542 456666655 67899999999999999875
No 345
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=43.24 E-value=1.7e+02 Score=25.49 Aligned_cols=180 Identities=12% Similarity=0.063 Sum_probs=85.7
Q ss_pred HHHHHHHHHHcCCcEEEEecccCCC---CCChhhHHHHHHHHHHH----hhcCcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAWRDT---IGRKTNFNQILEYVKDI----RDMGMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~~~~---~ge~~~~~~l~~~i~~i----k~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+.+.++.+.+.|++-|.+---..+. .| .....++.++++.+ ++.+..+.++.- ++..++.|.|.|.
T Consensus 45 ~~~~~~~al~~Gv~~vqlR~K~~~~~~~~~-~l~~~~~~~~a~~l~~l~~~~~~~liInd~------~~lA~~~gAdGVH 117 (243)
T 3o63_A 45 LAQFAEAALAGGVDIIQLRDKGSPGELRFG-PLQARDELAACEILADAAHRYGALFAVNDR------ADIARAAGADVLH 117 (243)
T ss_dssp HHHHHHHHHHTTCSEEEECCTTCHHHHHHC-SCCHHHHHHHHHHHHHHHHHTTCEEEEESC------HHHHHHHTCSEEE
T ss_pred HHHHHHHHHHCCCCEEEEccCCCCcccccc-CCCHHHHHHHHHHHHHHHHhhCCEEEEeCH------HHHHHHhCCCEEE
Confidence 4555556677899877663210000 00 01133444444444 356777766632 2335567999999
Q ss_pred cccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCC
Q 016599 200 HNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINALLAVKG 277 (386)
Q Consensus 200 i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~g 277 (386)
++.+.. ... ++.+...+ .++|. -.|.+|+... .+.+ ++.+.+.++.|.+.
T Consensus 118 Lg~~dl~~~~----------------~r~~~~~~------~~iG~S~ht~~Ea~~A----~~~G--aDyI~vgpvf~T~t 169 (243)
T 3o63_A 118 LGQRDLPVNV----------------ARQILAPD------TLIGRSTHDPDQVAAA----AAGD--ADYFCVGPCWPTPT 169 (243)
T ss_dssp ECTTSSCHHH----------------HHHHSCTT------CEEEEEECSHHHHHHH----HHSS--CSEEEECCSSCCCC
T ss_pred ecCCcCCHHH----------------HHHhhCCC------CEEEEeCCCHHHHHHH----hhCC--CCEEEEcCccCCCC
Confidence 876554 211 11111122 33343 3566665433 3354 88999887666442
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHhCC-Cc-ceeecCcccccChhHHHhhhhcCccccccCCccccCCCCChhHHHHHH
Q 016599 278 TPLQDQKPVEIWEMIRMIATARIVMP-KA-MVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTPNNDFDADQLMF 353 (386)
Q Consensus 278 T~l~~~~~~s~~e~~~~~a~~R~~lp-~~-~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~~~~~~~~~~~i 353 (386)
.+. .++...+.+.++.. ..+ +. .+-+ +| + .++.....+.+||+.+..+..+... .++.+..+.+
T Consensus 170 K~~--~~~~gl~~l~~~~~----~~~~~iPvvAi-GG-I--~~~ni~~~~~aGa~gvav~sai~~a--~dp~~a~~~l 235 (243)
T 3o63_A 170 KPG--RAAPGLGLVRVAAE----LGGDDKPWFAI-GG-I--NAQRLPAVLDAGARRIVVVRAITSA--DDPRAAAEQL 235 (243)
T ss_dssp -------CCCHHHHHHHHT----C---CCCEEEE-SS-C--CTTTHHHHHHTTCCCEEESHHHHTC--SSHHHHHHHH
T ss_pred CCC--cchhhHHHHHHHHH----hccCCCCEEEe-cC-C--CHHHHHHHHHcCCCEEEEeHHHhCC--CCHHHHHHHH
Confidence 221 13344443332221 111 21 1222 22 2 3333456778999999777644432 3444444433
No 346
>3tva_A Xylose isomerase domain protein TIM barrel; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.15A {Planctomyces limnophilus}
Probab=43.09 E-value=1.4e+02 Score=26.02 Aligned_cols=83 Identities=10% Similarity=0.158 Sum_probs=51.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHH----hhcCcEEEEecCCCCHHHH-HHHHHhccC
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDI----RDMGMEVCCTLGMLEKHQA-IELKKAGLT 196 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~i----k~~g~~i~~t~g~l~~e~l-~~Lk~aG~~ 196 (386)
...+.+.+.++.+...|++.+.+..|..+. +....++.+.+.++.+ ++.|+.+.+.|-.-+.+.+ +.+++.+-.
T Consensus 99 ~~~~~~~~~i~~a~~lG~~~v~~~~G~~~~-~~~~~~~~~~~~l~~l~~~a~~~Gv~l~lE~~~~~~~~~~~l~~~~~~~ 177 (290)
T 3tva_A 99 SRVAEMKEISDFASWVGCPAIGLHIGFVPE-SSSPDYSELVRVTQDLLTHAANHGQAVHLETGQESADHLLEFIEDVNRP 177 (290)
T ss_dssp HHHHHHHHHHHHHHHHTCSEEEECCCCCCC-TTSHHHHHHHHHHHHHHHHHHTTTCEEEEECCSSCHHHHHHHHHHHCCT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEcCCCCcc-cchHHHHHHHHHHHHHHHHHHHcCCEEEEecCCCCHHHHHHHHHhcCCC
Confidence 356778888888889999988875443322 1223445555555444 4568888777655454444 445555666
Q ss_pred eeecccCch
Q 016599 197 AYNHNLDTS 205 (386)
Q Consensus 197 ~v~i~le~~ 205 (386)
.+.+-+|+.
T Consensus 178 ~~g~~~D~~ 186 (290)
T 3tva_A 178 NLGINFDPA 186 (290)
T ss_dssp TEEEEECHH
T ss_pred CEEEEeccH
Confidence 677777775
No 347
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=43.08 E-value=87 Score=29.95 Aligned_cols=116 Identities=12% Similarity=0.091 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHH-HHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec-CCCCHHHHHHHHHhc-cCee
Q 016599 122 MTKDAVMQAAQK-AKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL-GMLEKHQAIELKKAG-LTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~-~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~-g~l~~e~l~~Lk~aG-~~~v 198 (386)
.++++.++.++. +.+.++. .+ ..+.. +..++.+..+-+.+. ..+.++... ...+.+.++.+.+.| ++.+
T Consensus 263 ~t~~eai~~~~~ll~~y~i~--~I----EdPl~-~dD~eg~~~L~~~~~-~pI~ivGDel~vt~~~~~~~~i~~~a~d~i 334 (428)
T 3tqp_A 263 LTSEEMIDRLTEWTKKYPVI--SI----EDGLS-ENDWAGWKLLTERLE-NKVQLVGDDIFVTNPDILEKGIKKNIANAI 334 (428)
T ss_dssp BCHHHHHHHHHHHHHHSCEE--EE----ECCSC-TTCHHHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred cCHHHHHHHHHHHHhhcccc--eE----eCCCC-cccHHHHHHHHHhcC-CCcceeccccccCCHHHHHHHHHhCCCCEE
Confidence 689999999887 6666642 22 22222 233444444333221 124443332 223677777776655 6777
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHH
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTL 257 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l 257 (386)
++.+ .+-.+.-+.+++++.++++|+.+-+.-.. |||.+.+...+...
T Consensus 335 ~iKv----------~~iGGiTealkia~lA~~~G~~~~v~H~s--GEted~~iadLaVa 381 (428)
T 3tqp_A 335 LVKL----------NQIGTLTETLATVGLAKSNKYGVIISHRS--GETEDTTIADLAVA 381 (428)
T ss_dssp EECH----------HHHCCHHHHHHHHHHHHHTTCEEEEECCS--BCCSCCHHHHHHHH
T ss_pred Eecc----------cccCCHHHHHHHHHHHHHcCCeEEEeCCC--CCchHHHHHHHHHH
Confidence 7643 23357888999999999999974332222 78876665554443
No 348
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=43.05 E-value=1.5e+02 Score=26.52 Aligned_cols=120 Identities=13% Similarity=0.091 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~ 105 (301)
T 1xky_A 30 IDFAKTTKLVNYLIDNGTTAIVVGGTT----GESPTLTSEEKVALYRHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATE 105 (301)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHh
Confidence 788999999999999999998875532 332 344555555555542 23566555554 44555444 456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEee---cCCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIG---LGEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~G---lget~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-..-+.+ ..-+.+.+.++
T Consensus 106 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 162 (301)
T 1xky_A 106 VGVDAVMLVAPYY-------N-KPSQEGMYQHFKAIAESTPLPVMLYNVPGRSIVQISVDTVVRL 162 (301)
T ss_dssp TTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHH
T ss_pred cCCCEEEEcCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 6999887632211 1 1255666666666555 366654433332 23355554444
No 349
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=43.05 E-value=40 Score=32.12 Aligned_cols=81 Identities=9% Similarity=-0.089 Sum_probs=45.5
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-C---chHHHHhhhCC------------CCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-D---TSREFYSKIIT------------TRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e---~~~~~~~~i~~------------~~s~~ 219 (386)
..++..++++.+.+.++.. .-....-+.+.+++|++. ..+++.. | +..+..+.+.. -....
T Consensus 242 ~~~~Ai~~~~~Le~~~i~~iEeP~~~~d~~~~~~l~~~--~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGit 319 (412)
T 3stp_A 242 NLDYAKRMLPKLAPYEPRWLEEPVIADDVAGYAELNAM--NIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGIT 319 (412)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHT--CSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCCcccHHHHHHHHhC--CCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCHH
Confidence 4567777778777776642 211222356777777765 1233322 2 22222222211 12367
Q ss_pred HHHHHHHHHHHcCCeeeEeE
Q 016599 220 ERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~ 239 (386)
+.++....+.+.|+.+..+.
T Consensus 320 ~a~kia~~A~a~gi~v~~h~ 339 (412)
T 3stp_A 320 AAQKINAIAEAAQIPVIPHA 339 (412)
T ss_dssp HHHHHHHHHHHHTCCBCCSS
T ss_pred HHHHHHHHHHHcCCEEEecc
Confidence 78888889999999876654
No 350
>1o66_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; structural genomics; HET: MSE; 1.75A {Neisseria meningitidis serogroup B} SCOP: c.1.12.8 PDB: 1o68_A*
Probab=42.81 E-value=57 Score=29.22 Aligned_cols=67 Identities=19% Similarity=0.268 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHH-----------------
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKH----------------- 185 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e----------------- 185 (386)
++++.++-+..+.+.|+..|.|-++ +++.+.|+.+.+.|++++.+.|+....
T Consensus 93 s~~~a~~na~rl~kaGa~aVklEdg-----------~e~~~~I~al~~agIpV~gHiGLtPQs~~~~ggf~v~grt~~a~ 161 (275)
T 1o66_A 93 SKEQAFAAAAELMAAGAHMVKLEGG-----------VWMAETTEFLQMRGIPVCAHIGLTPQSVFAFGGYKVQGRGGKAQ 161 (275)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECS-----------GGGHHHHHHHHHTTCCEEEEEESCGGGTTC-----------CHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEECCc-----------HHHHHHHHHHHHcCCCeEeeeccCceeecccCCeEEEeChHHHH
Q ss_pred ----HHHHHHHhccCeeec
Q 016599 186 ----QAIELKKAGLTAYNH 200 (386)
Q Consensus 186 ----~l~~Lk~aG~~~v~i 200 (386)
.++.+.+||++.+.+
T Consensus 162 ~~i~rA~a~~eAGA~~ivl 180 (275)
T 1o66_A 162 ALLNDAKAHDDAGAAVVLM 180 (275)
T ss_dssp HHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCcEEEE
No 351
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=42.80 E-value=33 Score=31.96 Aligned_cols=24 Identities=8% Similarity=0.221 Sum_probs=16.2
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEE
Q 016599 217 SYDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
...+.++....+++.|+.+..+.+
T Consensus 271 Git~~~~ia~~A~~~gi~~~~~~~ 294 (367)
T 3dg3_A 271 GFTGSTRVHHLAEGLGLDMVMGNQ 294 (367)
T ss_dssp TTHHHHHHHHHHHHHTCEEEECCS
T ss_pred hHHHHHHHHHHHHHcCCeEEECCc
Confidence 355667777778888887655443
No 352
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=42.69 E-value=1.3e+02 Score=26.94 Aligned_cols=120 Identities=13% Similarity=0.153 Sum_probs=62.8
Q ss_pred CHHHHHHHHHHHHHc----CCcEEEEecccC-C-CCC---ChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHH
Q 016599 123 TKDAVMQAAQKAKEA----GSTRFCMGAAWR-D-TIG---RKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKK 192 (386)
Q Consensus 123 s~eeI~~~~~~~~~~----G~~~v~l~~g~~-~-~~g---e~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~ 192 (386)
+.+.+++.++.+++. |+..++-.+-+. | |.. .....+.=++++++++ +.|+.+.++. ++.+.++.+.+
T Consensus 29 ~~~~~~e~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~Glp~~tev--~d~~~v~~l~~ 106 (288)
T 3tml_A 29 SEQMTIDTAGRLKEICEKLNVPFIYKSSYDKANRSSGKSFRGLGMDEGLRILSEVKRQLGLPVLTDV--HSIDEIEQVAS 106 (288)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBC--------------CHHHHHHHHHHHHHHHCCCEEEEC--CSGGGHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHcCCCEEEecccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEe--CCHHHHHHHHH
Confidence 567777777776654 654443322111 1 100 0012344455555555 6799887664 56788888888
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
. ++.+.++---. .+++ .++.+.+.|.+|.. =-|..-|.+|+...++.+.+-|
T Consensus 107 ~-vd~lkIgA~~~----------~n~~----LLr~~a~~gkPVil--K~G~~~t~~e~~~ave~i~~~G 158 (288)
T 3tml_A 107 V-VDVLQTPAFLC----------RQTD----FIHACARSGKPVNI--KKGQFLAPHDMKNVIDKARDAA 158 (288)
T ss_dssp H-CSEEEECGGGT----------TCHH----HHHHHHTSSSCEEE--ECCTTCCTTHHHHHHHHHHHHH
T ss_pred h-CCEEEECcccc----------cCHH----HHHHHHccCCcEEE--eCCCCCCHHHHHHHHHHHHHcC
Confidence 8 99998854211 1121 23334444544221 1122236777777777776543
No 353
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=42.61 E-value=26 Score=33.11 Aligned_cols=99 Identities=12% Similarity=0.063 Sum_probs=56.0
Q ss_pred hHHHHHHHHHHHhhcCcEEEEe-cCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhhhCC------------CCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEVCCT-LGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKIIT------------TRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~i~~------------~~s~~ 219 (386)
..++..++++.+.+.++...-. ...-+.+.++++++.- .+++.. |.. .+..+.+.. -....
T Consensus 221 ~~~~ai~~~~~l~~~~i~~iE~P~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 298 (403)
T 2ox4_A 221 DLVSAIQFAKAIEEFNIFFYEEINTPLNPRLLKEAKKKI--DIPLASGERIYSRWGFLPFLEDRSIDVIQPDLGTCGGFT 298 (403)
T ss_dssp CHHHHHHHHHHHGGGCEEEEECCSCTTSTHHHHHHHHTC--CSCEEECTTCCHHHHHHHHHHTTCCSEECCCHHHHTHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEeCCCChhhHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHH
Confidence 4577788888887777653211 2223566777777652 344422 222 222222211 12467
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.+++.|+.+..+.+. +.=-....+.+...++
T Consensus 299 e~~~i~~~A~~~g~~~~~h~~~----s~i~~aa~~hlaaa~~ 336 (403)
T 2ox4_A 299 EFKKIADMAHIFEVTVQAHVAG----TGVAEAASLHAEIAIP 336 (403)
T ss_dssp HHHHHHHHHHHTTCEECCCCCS----CHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHHHcCCEEeecCCC----CHHHHHHHHHHHHhCC
Confidence 7788899999999986665442 4434555566666663
No 354
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=42.61 E-value=70 Score=29.99 Aligned_cols=22 Identities=9% Similarity=-0.012 Sum_probs=16.3
Q ss_pred CCHHHHHHHHHHHHHcCCeeeE
Q 016599 216 RSYDERLETLKHVREAGINVCS 237 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~ 237 (386)
....+.++....+..+|+.+..
T Consensus 296 GGit~~~kia~~A~~~gv~v~~ 317 (388)
T 4h83_A 296 GGPTAWLRTAAIATSYDVQMGH 317 (388)
T ss_dssp TCHHHHHHHHHHHHHTTCEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEe
Confidence 3577788888888888886543
No 355
>3b8i_A PA4872 oxaloacetate decarboxylase; alpha/beta barrel, helix swapping, lyase; 1.90A {Pseudomonas aeruginosa}
Probab=42.53 E-value=1.9e+02 Score=25.93 Aligned_cols=134 Identities=11% Similarity=0.040 Sum_probs=85.3
Q ss_pred HHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecccCchH-HHHhhhC-CCCCHHHHHHHHHHHHHc-CCeeeEeEE
Q 016599 164 YVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSR-EFYSKII-TTRSYDERLETLKHVREA-GINVCSGGI 240 (386)
Q Consensus 164 ~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~-~~~~~i~-~~~s~~~~l~~i~~a~~~-Gi~v~~~~i 240 (386)
.++.+++.+ +..+-++..+.-..+.+.++|++.+.++=-+.. ..+-.=. ..-++++.+..++.+.+. .+++.+++=
T Consensus 12 ~lr~l~~~~-~~i~~~~a~D~~sA~i~e~aGf~ai~vs~s~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~~PviaD~d 90 (287)
T 3b8i_A 12 MFRALLDSS-RCYHTASVFDPMSARIAADLGFECGILGGSVASLQVLAAPDFALITLSEFVEQATRIGRVARLPVIADAD 90 (287)
T ss_dssp HHHHHHHSS-CCEECEECCSHHHHHHHHHTTCSCEEECHHHHHHHHHSCCSSSCSCHHHHHHHHHHHHTTCSSCEEEECT
T ss_pred HHHHHHhCC-CcEEEecCCCHHHHHHHHHcCCCEEEeCcHHHHHHhcCCCCCCCCCHHHHHHHHHHHHhcCCCCEEEECC
Confidence 344444333 222334567888888899999999887532221 1111111 123899999988887654 677888888
Q ss_pred eecCCCHHHHHHHHHHHhcCCCCCCeEeeeee-eecCCCCCCCCCCCCHHHHHHHHHHHHHhC
Q 016599 241 IGLGEAEEDRVGLLHTLATLPTHPESVPINAL-LAVKGTPLQDQKPVEIWEMIRMIATARIVM 302 (386)
Q Consensus 241 ~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f-~P~~gT~l~~~~~~s~~e~~~~~a~~R~~l 302 (386)
.|+| +.++..+++..+.+.| +.-+.+--- .|...-.+... ..+.+++...+..++..-
T Consensus 91 ~Gyg-~~~~~~~~v~~l~~aG--a~gv~iED~~~pKrcgh~~gk-l~~~~e~~~~I~aa~~a~ 149 (287)
T 3b8i_A 91 HGYG-NALNVMRTVVELERAG--IAALTIEDTLLPAQFGRKSTD-LICVEEGVGKIRAALEAR 149 (287)
T ss_dssp TCSS-SHHHHHHHHHHHHHHT--CSEEEEECBCCSCCTTTCTTC-BCCHHHHHHHHHHHHHHC
T ss_pred CCCC-CHHHHHHHHHHHHHhC--CeEEEEcCCCCccccCCCCCC-ccCHHHHHHHHHHHHHcC
Confidence 8887 8899999998887776 666666322 13221112334 678888888888777654
No 356
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=42.50 E-value=39 Score=32.25 Aligned_cols=103 Identities=7% Similarity=-0.100 Sum_probs=54.9
Q ss_pred hhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHh-ccCeeec-ccCc---hHHHHhh-----hC----CCCCHHH
Q 016599 156 TNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKA-GLTAYNH-NLDT---SREFYSK-----II----TTRSYDE 220 (386)
Q Consensus 156 ~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~a-G~~~v~i-~le~---~~~~~~~-----i~----~~~s~~~ 220 (386)
...++..++++.+.+.++.. .-....-+.+.+++|++. ++-.+.- ++.+ +.+..+. +. +-....+
T Consensus 237 ~~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k~~~~GGit~ 316 (424)
T 3v3w_A 237 LTPIEAARLGKALEPYHLFWMEDAVPAENQESFKLIRQHTTTPLAVGEVFNSIHDCRELIQNQWIDYIRTTIVHAGGISQ 316 (424)
T ss_dssp CCHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHH
T ss_pred CCHHHHHHHHHHHHhcCCCEEECCCChHhHHHHHHHHhhCCCCEEEccCcCCHHHHHHHHHcCCCCeEeecchhcCCHHH
Confidence 34577778888887776652 211122245566777664 2211111 1222 2222221 11 1224788
Q ss_pred HHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 221 RLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 221 ~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.++....+.+.|+.+..+.+. .++.=-+...+++...+
T Consensus 317 ~~~ia~~A~~~gi~~~~h~~~--~~s~ig~aA~~hlaaa~ 354 (424)
T 3v3w_A 317 MRRIADFASLFHVRTGFHGAT--DLSPVCMGAALHFDYWV 354 (424)
T ss_dssp HHHHHHHHHTTTCEEEECCCT--TSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHcCCEEEecCCC--cccHHHHHHHHHHHHhC
Confidence 888899999999987665442 13444455566666666
No 357
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=42.48 E-value=54 Score=28.23 Aligned_cols=71 Identities=15% Similarity=0.176 Sum_probs=45.7
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC--CCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHh-----
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD--TIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKA----- 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~--~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~a----- 193 (386)
.+..|+.+ .+.+.|+..+++.+-... ..| .. ++.++.+++ ..+++..+-|..+.+.++.+++.
T Consensus 144 ~~~~e~~~---~~~~~G~~~i~~t~~~~~g~~~g--~~----~~~i~~l~~~~~iPvia~GGI~~~~d~~~~~~~~~~~~ 214 (241)
T 1qo2_A 144 IDPVSLLK---RLKEYGLEEIVHTEIEKDGTLQE--HD----FSLTKKIAIEAEVKVLAAGGISSENSLKTAQKVHTETN 214 (241)
T ss_dssp CCHHHHHH---HHHTTTCCEEEEEETTHHHHTCC--CC----HHHHHHHHHHHTCEEEEESSCCSHHHHHHHHHHHHHTT
T ss_pred CCHHHHHH---HHHhCCCCEEEEEeecccccCCc--CC----HHHHHHHHHhcCCcEEEECCCCCHHHHHHHHhcccccC
Confidence 45555543 445578888877542110 011 12 444555543 37888888888899999999998
Q ss_pred c-cCeeecc
Q 016599 194 G-LTAYNHN 201 (386)
Q Consensus 194 G-~~~v~i~ 201 (386)
| ++.+.++
T Consensus 215 G~adgv~vg 223 (241)
T 1qo2_A 215 GLLKGVIVG 223 (241)
T ss_dssp TSEEEEEEC
T ss_pred CeEeEEEee
Confidence 9 9988774
No 358
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=42.46 E-value=2e+02 Score=26.20 Aligned_cols=70 Identities=11% Similarity=0.175 Sum_probs=38.5
Q ss_pred HHHHHHcCCcEEEEecccCC-CCCChhhH-HHHHHHHHHHh-hc-CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRD-TIGRKTNF-NQILEYVKDIR-DM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~-~~ge~~~~-~~l~~~i~~ik-~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
++...+.|++.|.+...+.. ..-.|..+ +.++..++++. .. +..+....|. ....++.+.+.|++.+++.
T Consensus 196 ~~~qi~aGad~i~i~D~~a~~~~lsp~~f~~f~~p~~k~i~~~~~~~~iih~~g~-~~~~l~~~~~~g~d~i~~d 269 (348)
T 4ay7_A 196 ANAMVEAGADVIAIADPVASPDLMSPDSFRQFLKSRLQKFASSVNSVTVLHICGN-VNPILSDMADCGFEGLSVE 269 (348)
T ss_dssp HHHHHHHTCSEEEEECGGGSTTTSCHHHHHHHHHHHHHHHHHHSSSEEEEECCSC-CHHHHHHHHTSCCSEEECC
T ss_pred HHHHHhcCCCcceeeccccccccCCHHHHHHHhhHHHHHHHhhccCCcEEEecCC-cHHHHHHHHHhcccccccc
Confidence 34445679988877533321 11224333 34444455443 22 2333333443 4678999999999988763
No 359
>3hg3_A Alpha-galactosidase A; glycoprotein, carbohydrate-binding protein, glycosidase, Lys enzyme, (beta/alpha)8 barrel, disease mutation; HET: NAG BMA MAN GLA GLC 2PE; 1.90A {Homo sapiens} PDB: 3tv8_A* 3lx9_A* 3lxa_A* 3lxb_A* 3lxc_A* 3s5z_A* 1r47_A* 1r46_A* 3gxn_A* 3gxt_A* 3hg2_A* 3hg4_A* 3hg5_A* 3gxp_A* 3s5y_A*
Probab=42.33 E-value=61 Score=30.77 Aligned_cols=79 Identities=16% Similarity=0.374 Sum_probs=52.1
Q ss_pred CCHHHHHHHHHHHH-----HcCCcEEEEecccCC----CCC----ChhhHHH-HHHHHHHHhhcCcE--EEEecC-----
Q 016599 122 MTKDAVMQAAQKAK-----EAGSTRFCMGAAWRD----TIG----RKTNFNQ-ILEYVKDIRDMGME--VCCTLG----- 180 (386)
Q Consensus 122 ~s~eeI~~~~~~~~-----~~G~~~v~l~~g~~~----~~g----e~~~~~~-l~~~i~~ik~~g~~--i~~t~g----- 180 (386)
.+.+.|++.++.+. +.|+..|+|--|+.. ..| .+..|+. +..+++.+++.|+. +....|
T Consensus 33 i~e~~i~~~ad~~~~~Gl~~~G~~~~~iDDgW~~~~rd~~G~~~~~~~kFP~Gl~~l~~~ih~~Glk~Giw~~~g~~tC~ 112 (404)
T 3hg3_A 33 ISEKLFMEMAELMVSEGWKDAGYEYLCIDDCWMAPQRDSEGRLQADPQRFPHGIRQLANYVHSKGLKLGIYADVGNKTCA 112 (404)
T ss_dssp SSHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCSSCCTTSCCCBCTTTSTTHHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred cCHHHHHHHHHHHHHCCcHhhCCeEEEECCCcCCCCCCCCCCeeeChhhcCCCHHHHHHHHHHCCCeeEEEecCCccccC
Confidence 68899999998765 567777877655532 112 1233443 78888888888877 344433
Q ss_pred ----CC--CHHHHHHHHHhccCeeec
Q 016599 181 ----ML--EKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 181 ----~l--~~e~l~~Lk~aG~~~v~i 200 (386)
.. .+..++.+++-|+|.+-+
T Consensus 113 ~~pGs~~~~~~da~~fa~WGvDylK~ 138 (404)
T 3hg3_A 113 GFPGSFGYYDIDAQTFADWGVDLLKF 138 (404)
T ss_dssp SSBCCTTCHHHHHHHHHHHTCCEEEE
T ss_pred CCCccHHHHHHHHHHHHHhCCcEEEe
Confidence 22 245577888889999876
No 360
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=42.32 E-value=36 Score=32.47 Aligned_cols=102 Identities=6% Similarity=-0.129 Sum_probs=53.9
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHh-ccCeeec-ccCch---HHHHhh-----hC----CCCCHHHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKA-GLTAYNH-NLDTS---REFYSK-----II----TTRSYDER 221 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~a-G~~~v~i-~le~~---~~~~~~-----i~----~~~s~~~~ 221 (386)
..++..++++.+.+.++.. .-....-+.+.++.+++. ++-.+.- ++.+. .+..+. +. +-....+.
T Consensus 232 ~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~k~~~~GGit~~ 311 (418)
T 3r4e_A 232 TPQEAANLGKMLEPYQLFWLEDCTPAENQEAFRLVRQHTVTPLAVGEIFNTIWDAKDLIQNQLIDYIRATVVGAGGLTHL 311 (418)
T ss_dssp CHHHHHHHHHHHGGGCCSEEESCSCCSSGGGGHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEECCCCccCHHHHHHHHhcCCCCEEEcCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHH
Confidence 4577778888887766542 111111244556666654 2211111 11121 222221 11 12347888
Q ss_pred HHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 222 LETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 222 l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
++....+.+.|+.+..+.+. .++.=-+...+++...+
T Consensus 312 ~~ia~~A~~~gi~~~~h~~~--~~s~ig~aA~~hlaaa~ 348 (418)
T 3r4e_A 312 RRIADLASLYQVRTGCHGPT--DLSPVTMGCALHFDTWV 348 (418)
T ss_dssp HHHHHHHHHTTCEEEECCCT--TSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHcCCEEeecCCC--CccHHHHHHHHHHHHhC
Confidence 89999999999987665542 13444455566666666
No 361
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=42.23 E-value=1.3e+02 Score=27.39 Aligned_cols=137 Identities=9% Similarity=-0.013 Sum_probs=66.6
Q ss_pred ccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHc----------CCeeeEeEEeecCCCHHHHHHHHHHHhcCCC
Q 016599 194 GLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREA----------GINVCSGGIIGLGEAEEDRVGLLHTLATLPT 262 (386)
Q Consensus 194 G~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~----------Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~ 262 (386)
|+|.+.+++-+. ..-... ..+.+...+.++.+++. ++++.+-+- .+.+.+|+.++++.+.+.|
T Consensus 165 g~d~iein~~sP~~~g~~~---~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~--~~~~~~~~~~~a~~l~~~G- 238 (336)
T 1f76_A 165 YAGYIAINISSPNTPGLRT---LQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIA--PDLSEEELIQVADSLVRHN- 238 (336)
T ss_dssp GCSEEEEECCCSSSTTGGG---GGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECC--SCCCHHHHHHHHHHHHHTT-
T ss_pred cCCEEEEEccCCCCCCccc---ccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEec--CCCCHHHHHHHHHHHHHcC-
Confidence 688877765432 110001 11234334444444432 455554432 3567788999999999997
Q ss_pred CCCeEeeeeeeecC-C-------CCCCCCCC-CCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccc
Q 016599 263 HPESVPINALLAVK-G-------TPLQDQKP-VEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIF 333 (386)
Q Consensus 263 ~~~~v~~~~f~P~~-g-------T~l~~~~~-~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~ 333 (386)
++.+.+....... + +....... +.....+..+...+...+..+.-+..|-+. +.......+.+||+.++
T Consensus 239 -vd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipVi~~GGI~-~~~da~~~l~~GAd~V~ 316 (336)
T 1f76_A 239 -IDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPIIGVGGID-SVIAAREKIAAGASLVQ 316 (336)
T ss_dssp -CSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCEEEESSCC-SHHHHHHHHHHTCSEEE
T ss_pred -CcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCEEEECCCC-CHHHHHHHHHCCCCEEE
Confidence 7777775432110 0 00000000 001122344444444444222223333332 23344667788999987
Q ss_pred cCCcc
Q 016599 334 TGEKL 338 (386)
Q Consensus 334 ~g~~~ 338 (386)
.|..+
T Consensus 317 igr~~ 321 (336)
T 1f76_A 317 IYSGF 321 (336)
T ss_dssp ESHHH
T ss_pred eeHHH
Confidence 77533
No 362
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=42.17 E-value=30 Score=33.14 Aligned_cols=103 Identities=5% Similarity=-0.063 Sum_probs=54.8
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHh-ccCeeec-ccCch---HHHHhh-----hC----CCCCHHHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKA-GLTAYNH-NLDTS---REFYSK-----II----TTRSYDER 221 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~a-G~~~v~i-~le~~---~~~~~~-----i~----~~~s~~~~ 221 (386)
..++..++++.+.+.++.. .-....-+.+.++.|++. ++-.+.- ++.+. .+..+. +. +-....+.
T Consensus 239 ~~~~A~~~~~~L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~ 318 (425)
T 3vcn_A 239 TPIEAARLGKDLEPYRLFWLEDSVPAENQAGFRLIRQHTTTPLAVGEIFAHVWDAKQLIEEQLIDYLRATVLHAGGITNL 318 (425)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCCSSTTHHHHHHHHCCSCEEECTTCCSGGGTHHHHHTTCCSEECCCTTTTTHHHHH
T ss_pred CHHHHHHHHHHHHhcCCCEEECCCChhhHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecChhhcCCHHHH
Confidence 4567778888887776652 211122245566777664 2221111 12121 222221 11 12247888
Q ss_pred HHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 222 LETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 222 l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
++....+.+.|+.+..+.+. .++.=-+...+++...++
T Consensus 319 ~~ia~~A~~~gi~~~~h~~~--~~s~ig~aA~~hlaaa~p 356 (425)
T 3vcn_A 319 KKIAAFADLHHVKTGCHGAT--DLSPVTMAAALHFDMSIT 356 (425)
T ss_dssp HHHHHHHGGGTCEECCCCCT--TSCHHHHHHHHHHHHTCS
T ss_pred HHHHHHHHHcCCEEeeccCC--cccHHHHHHHHHHHHhCC
Confidence 88999999999987665442 134444555666666653
No 363
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=42.13 E-value=1.1e+02 Score=29.16 Aligned_cols=82 Identities=7% Similarity=0.114 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHh--ccCeeec-ccCchHHHHhh------------hCCCCCHHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKA--GLTAYNH-NLDTSREFYSK------------IITTRSYDE 220 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~a--G~~~v~i-~le~~~~~~~~------------i~~~~s~~~ 220 (386)
..++..++++.+.+.++.. .-....-+.+.++.+++. ++..+.- ++.+.....+. +.+-....+
T Consensus 254 ~~~~a~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite 333 (441)
T 2hxt_A 254 DVGPAIDWMRQLAEFDIAWIEEPTSPDDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNE 333 (441)
T ss_dssp CHHHHHHHHHTTGGGCCSCEECCSCTTCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHH
T ss_pred CHHHHHHHHHHHHhcCCCeeeCCCCHHHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHH
Confidence 4566777777776666542 211122356667777664 2221111 11111111111 112235788
Q ss_pred HHHHHHHHHHcCCeeeEe
Q 016599 221 RLETLKHVREAGINVCSG 238 (386)
Q Consensus 221 ~l~~i~~a~~~Gi~v~~~ 238 (386)
.++.+..+++.|+.+..+
T Consensus 334 ~~~ia~~A~~~g~~~~~h 351 (441)
T 2hxt_A 334 NLAILLLAAKFGVRVFPH 351 (441)
T ss_dssp HHHHHHHHHHTTCEECCC
T ss_pred HHHHHHHHHHcCCeEEEe
Confidence 888888899999887543
No 364
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=42.13 E-value=1.3e+02 Score=27.02 Aligned_cols=107 Identities=11% Similarity=0.065 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~ 100 (297)
T 3flu_A 25 IHYEQLRDLIDWHIENGTDGIVAVGTT----GESATLSVEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEK 100 (297)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH
Confidence 788999999999999999998875532 332 344555555555542 23566555554 4455444 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEE
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGI 240 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i 240 (386)
+|+|.+.+-.-.+ . ..+-+..++-.+.+.+ .++++-..-+
T Consensus 101 ~Gadavlv~~P~y-------~-~~~~~~l~~~f~~va~a~~lPiilYn~ 141 (297)
T 3flu_A 101 AGADYTLSVVPYY-------N-KPSQEGIYQHFKTIAEATSIPMIIYNV 141 (297)
T ss_dssp TTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhCCCCEEEEEC
Confidence 7999887632111 1 1245666666666544 4777554433
No 365
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=42.02 E-value=1.3e+02 Score=27.98 Aligned_cols=75 Identities=17% Similarity=0.133 Sum_probs=47.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEeccc--CCC------CCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAW--RDT------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~--~~~------~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
.+.+++. .+.+.|++.+.++.+. ..+ .|. ..+..+.++.+..+..++++...-|..+.+.+.+...+
T Consensus 158 ~t~e~A~----~a~~aGAD~I~vG~gpGs~~~tr~~~g~g~-p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~ 232 (366)
T 4fo4_A 158 ATAEGAR----ALIEAGVSAVKVGIGPGSICTTRIVTGVGV-PQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAA 232 (366)
T ss_dssp CSHHHHH----HHHHHTCSEEEECSSCSTTBCHHHHHCCCC-CHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHT
T ss_pred CCHHHHH----HHHHcCCCEEEEecCCCCCCCcccccCccc-chHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHc
Confidence 4666544 4455688888773111 000 011 13344555444445668888888898888888888889
Q ss_pred ccCeeecc
Q 016599 194 GLTAYNHN 201 (386)
Q Consensus 194 G~~~v~i~ 201 (386)
|.+.+.++
T Consensus 233 GAd~V~vG 240 (366)
T 4fo4_A 233 GASCVMVG 240 (366)
T ss_dssp TCSEEEES
T ss_pred CCCEEEEC
Confidence 99998864
No 366
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=41.95 E-value=1.6e+02 Score=26.17 Aligned_cols=121 Identities=10% Similarity=0.014 Sum_probs=70.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~ 93 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTT----GESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAGSNCTEEAIELSVFAED 93 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 788999999999999999998775532 332 334555555555442 23666665554 44555444 456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeec---CCCHHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGLL 254 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~l 254 (386)
+|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .++++-..-+.+. .-+.+.+.++.
T Consensus 94 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (289)
T 2yxg_A 94 VGADAVLSITPYY-------N-KPTQEGLRKHFGKVAESINLPIVLYNVPSRTAVNLEPKTVKLLA 151 (289)
T ss_dssp HTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 7999887632211 1 1255666666666444 4677544333332 34555555553
No 367
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=41.87 E-value=48 Score=31.29 Aligned_cols=43 Identities=9% Similarity=-0.056 Sum_probs=27.5
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
....+.++....+..+|+.+..+... .++.=-+...+++...+
T Consensus 287 GGit~~~kia~~A~~~gi~~~~h~~~--~~s~i~~aA~~hlaaa~ 329 (401)
T 3sbf_A 287 GGITPALKLGHLCQNFGVRIAWHCAP--DMTPIGAAVNTHLNVHL 329 (401)
T ss_dssp TSHHHHHHHHHHHHHHTCEECCCCCT--TSCHHHHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHHcCCEEEecCCc--ccchHHHHHHHHHHHhC
Confidence 35778888888899999886655431 13433445556666555
No 368
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=41.56 E-value=1.5e+02 Score=24.53 Aligned_cols=99 Identities=15% Similarity=0.181 Sum_probs=58.5
Q ss_pred HHHHHHHHHcCCcEEEEecc-cCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeecccCch
Q 016599 128 MQAAQKAKEAGSTRFCMGAA-WRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS 205 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g-~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~ 205 (386)
.+.++.+...+...+.+.+- ..++ +. .+. .+.+++++. ..+++...+|..+.+.+.++.++|++.+.++=
T Consensus 133 ~~~i~~~~~~~~~~vli~~~~~~g~-~~--g~~--~~~i~~~~~~~~~Pvia~~g~~~~~~~~~~~~~G~~~~~vg~--- 204 (237)
T 3cwo_X 133 RDWVVEVEKRGAGEILLTSIDRDGT-KS--GYD--TEMIRFVRPLTTLPIIASGGAGKMEHFLEAFLAGADAALAAS--- 204 (237)
T ss_dssp HHHHHHHHHHTCSEEEEEETTTTTC-CS--CCC--HHHHHHHGGGCCSCEEEESCCCSHHHHHHHHHHTCSEEEESH---
T ss_pred HHHHHHHhhcCCCeEEEEecCCCCc-cc--ccc--HHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCcHHHhhhH---
Confidence 33344555567777776652 2222 21 111 566777764 36777777888888888888889999876541
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEe
Q 016599 206 REFYSKIITTRSYDERLETLKHVREAGINVCSGGII 241 (386)
Q Consensus 206 ~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~ 241 (386)
..+ ..+.++.+.. +.+++.|+.+...++.
T Consensus 205 -a~~---~~~~~~~~~~---~~l~~~~~~~~~~~~~ 233 (237)
T 3cwo_X 205 -VFH---FREIDVRELK---EYLKKHGVNVRLEGLL 233 (237)
T ss_dssp -HHH---TTSSCHHHHH---HHHHTTTCCCCEEEEE
T ss_pred -HHH---cCCCCHHHHH---HHHHHCCCceehhhhh
Confidence 111 2334666544 4556778866555544
No 369
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=41.35 E-value=1.7e+02 Score=26.12 Aligned_cols=107 Identities=9% Similarity=0.017 Sum_probs=61.4
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTT----GEATTMTETERKETIKFVIDKVNKRIPVIAGTGSNNTAASIAMSKWAES 94 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHh
Confidence 688899999999999999998775532 332 334555555555442 23566555554 44555444 456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEE
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGI 240 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i 240 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-..-+
T Consensus 95 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~ia~a~~lPiilYn~ 135 (291)
T 3a5f_A 95 IGVDGLLVITPYY-------N-KTTQKGLVKHFKAVSDAVSTPIIIYNV 135 (291)
T ss_dssp TTCSEEEEECCCS-------S-CCCHHHHHHHC-CTGGGCCSCEEEEEC
T ss_pred cCCCEEEEcCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 6999887632111 1 1255555555555443 4666544333
No 370
>1szn_A Alpha-galactosidase; (beta/alpha)8 barrel,TWO domains, glycoprotein, hydrolase; HET: NAG BMA MAN; 1.54A {Hypocrea jecorina} SCOP: b.71.1.1 c.1.8.1 PDB: 1t0o_A*
Probab=41.32 E-value=74 Score=30.24 Aligned_cols=82 Identities=20% Similarity=0.312 Sum_probs=53.9
Q ss_pred CCHHHHHHHHHHH-----HHcCCcEEEEecccCCC----CCC----hhhHH-HHHHHHHHHhhcCcE--EEEecCC----
Q 016599 122 MTKDAVMQAAQKA-----KEAGSTRFCMGAAWRDT----IGR----KTNFN-QILEYVKDIRDMGME--VCCTLGM---- 181 (386)
Q Consensus 122 ~s~eeI~~~~~~~-----~~~G~~~v~l~~g~~~~----~ge----~~~~~-~l~~~i~~ik~~g~~--i~~t~g~---- 181 (386)
.+.+.|++.++.+ .+.|+..|+|-.||... .|. +..|+ -+..+++.+++.|++ +....|.
T Consensus 26 ~~e~~i~~~ad~~~~~gl~~~G~~~~~iDdgW~~~~~d~~G~~~~~~~kFP~Gl~~l~~~i~~~Glk~Giw~~~g~~~c~ 105 (417)
T 1szn_A 26 IDESKFLSAAELIVSSGLLDAGYNYVNIDDCWSMKDGRVDGHIAPNATRFPDGIDGLAKKVHALGLKLGIYSTAGTATCA 105 (417)
T ss_dssp CCHHHHHHHHHHHHHTTHHHHTCCEEECCSSCBCTTCCBTTBCCBCTTTCTTHHHHHHHHHHHTTCEEEEEEESSSBCTT
T ss_pred CCHHHHHHHHHHHHHcCchhhCCCEEEECCCccCCCCCCCCCEEECcccCCcCHHHHHHHHHHcCCEEEEEeCCCCchhc
Confidence 5788999999988 77888888875555321 121 22233 388888888888887 3444332
Q ss_pred -------CCHHHHHHHHHhccCeeecccC
Q 016599 182 -------LEKHQAIELKKAGLTAYNHNLD 203 (386)
Q Consensus 182 -------l~~e~l~~Lk~aG~~~v~i~le 203 (386)
.....++.+++.|++.|-+..-
T Consensus 106 ~~Pgs~~~~~~d~~~~~~wGvdylK~D~~ 134 (417)
T 1szn_A 106 GYPASLGYEDVDAADFADWGVDYLKYDNC 134 (417)
T ss_dssp SCBCCTTCHHHHHHHHHHTTCCEEEEECC
T ss_pred cCcchHhHHHHHHHHHHHcCCCEEEECCC
Confidence 1234477788899999876543
No 371
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=41.15 E-value=82 Score=28.82 Aligned_cols=89 Identities=20% Similarity=0.267 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEec---CCCCHHHHHHHHHhccCeeec
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTL---GMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~---g~l~~e~l~~Lk~aG~~~v~i 200 (386)
.+++++.++.+.+.|...+++-+ ....+.+.++.+.++ +++..+. |.-..-..++|++.|+.++.+
T Consensus 188 l~~ai~Ra~Ay~eAGAd~i~~e~--------~~~~e~~~~i~~~l~---~P~lan~~~~g~~~~~~~~eL~~lGv~~v~~ 256 (318)
T 1zlp_A 188 LEEGIRRANLYKEAGADATFVEA--------PANVDELKEVSAKTK---GLRIANMIEGGKTPLHTPEEFKEMGFHLIAH 256 (318)
T ss_dssp HHHHHHHHHHHHHTTCSEEEECC--------CCSHHHHHHHHHHSC---SEEEEEECTTSSSCCCCHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEcC--------CCCHHHHHHHHHhcC---CCEEEEeccCCCCCCCCHHHHHHcCCeEEEE
Q ss_pred ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcC
Q 016599 201 NLDTSREFYSKIITTRSYDERLETLKHVREAG 232 (386)
Q Consensus 201 ~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~G 232 (386)
+.-.+...+..+. ++.+.+++.|
T Consensus 257 ~~~~~raa~~a~~---------~~~~~l~~~g 279 (318)
T 1zlp_A 257 SLTAVYATARALV---------NIMKILKEKG 279 (318)
T ss_dssp CSHHHHHHHHHHH---------HHHHHHHHHS
T ss_pred chHHHHHHHHHHH---------HHHHHHHHcC
No 372
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=41.06 E-value=1.2e+02 Score=27.03 Aligned_cols=121 Identities=10% Similarity=0.007 Sum_probs=70.0
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELK 191 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk 191 (386)
.++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..+
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 94 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTT----AESPTLTTDEKELILKTVIDLVDKRVPVIAGTGTNDTEKSIQASIQAK 94 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccc----cccccCCHHHHHHHHHHHHHHhCCCCcEEEeCCcccHHHHHHHHHHHH
Confidence 3788999999999999999998875532 332 334555555555442 24566555554 4455444 445
Q ss_pred HhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEe---ecCCCHHHHHHH
Q 016599 192 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGL 253 (386)
Q Consensus 192 ~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~ 253 (386)
++|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-.--+. |..-+.+.+.++
T Consensus 95 ~~Gadavlv~~P~y-------~-~~~~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 152 (292)
T 3daq_A 95 ALGADAIMLITPYY-------N-KTNQRGLVKHFEAIADAVKLPVVLYNVPSRTNMTIEPETVEIL 152 (292)
T ss_dssp HHTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHHCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred HcCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhCCCCEEEEecccccCCCCCHHHHHHH
Confidence 66999887632211 1 1245566666655444 37775544333 334455554443
No 373
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=40.93 E-value=41 Score=31.62 Aligned_cols=42 Identities=17% Similarity=0.196 Sum_probs=29.1
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
...+.++.+..+.+.|+.+..+.+ .++.=-+...+.++..++
T Consensus 279 Git~~~~i~~~A~~~gi~~~~~~~---~es~i~~aa~~hlaaa~~ 320 (385)
T 3i6e_A 279 GLTRAQTVARIAAAHGLMAYGGDM---FEAGLAHLAGTHMIAATP 320 (385)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCC---SCCHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHHcCCEEEeCCC---CccHHHHHHHHHHHHhCC
Confidence 578888899999999998754433 345445566667776663
No 374
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=40.84 E-value=2e+02 Score=25.66 Aligned_cols=120 Identities=13% Similarity=0.073 Sum_probs=69.3
Q ss_pred CCHHHHHHHHHHHHH-cCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HH
Q 016599 122 MTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LK 191 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~-~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk 191 (386)
++.+.+.+.++.+.+ .|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .+
T Consensus 21 iD~~~l~~lv~~li~~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~ 96 (293)
T 1f6k_A 21 INEKGLRQIIRHNIDKMKVDGLYVGGST----GENFMLSTEEKKEIFRIAKDEAKDQIALIAQVGSVNLKEAVELGKYAT 96 (293)
T ss_dssp BCHHHHHHHHHHHHHTSCCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHhhCCCcEEEeCccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHH
Confidence 788999999999999 999998775532 332 344555555555542 24666665554 44555444 45
Q ss_pred HhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeec---CCCHHHHHHH
Q 016599 192 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGL 253 (386)
Q Consensus 192 ~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~ 253 (386)
++|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .++++-..-+.+. .-+.+.+.++
T Consensus 97 ~~Gadavlv~~P~y-------~-~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 154 (293)
T 1f6k_A 97 ELGYDCLSAVTPFY-------Y-KFSFPEIKHYYDTIIAETGSNMIVYSIPFLTGVNMGIEQFGEL 154 (293)
T ss_dssp HHTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHHCCCEEEEECHHHHCCCCCHHHHHHH
T ss_pred hcCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhCCCCEEEEECccccCcCCCHHHHHHH
Confidence 56999887632211 1 1245666666655444 4676544333322 3355554444
No 375
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=40.74 E-value=1.2e+02 Score=27.45 Aligned_cols=120 Identities=12% Similarity=0.108 Sum_probs=69.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 41 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~ 116 (314)
T 3qze_A 41 LDWDSLAKLVDFHLQEGTNAIVAVGTT----GESATLDVEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKS 116 (314)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSGG----GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHH
Confidence 789999999999999999998875432 332 334555555555432 23566555554 4455544 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEe---ecCCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-..-+. |..-+.+.+.++
T Consensus 117 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 173 (314)
T 3qze_A 117 GGADACLLVTPYY-------N-KPTQEGMYQHFRHIAEAVAIPQILYNVPGRTSCDMLPETVERL 173 (314)
T ss_dssp TTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHSCSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred cCCCEEEEcCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 7999887632111 1 1245666666666544 47775544333 334455554443
No 376
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=40.65 E-value=60 Score=30.07 Aligned_cols=99 Identities=10% Similarity=0.061 Sum_probs=55.7
Q ss_pred HHHHH-HHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhhhC------------CCCCHH
Q 016599 158 FNQIL-EYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSKII------------TTRSYD 219 (386)
Q Consensus 158 ~~~l~-~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~i~------------~~~s~~ 219 (386)
.++.. ++++.+.+.++.. .-....-+.+.++++++.- .+++.. |. .....+.+. +-....
T Consensus 198 ~~~a~~~~~~~l~~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit 275 (369)
T 2p8b_A 198 NSANTLTALRSLGHLNIDWIEQPVIADDIDAMAHIRSKT--DLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIY 275 (369)
T ss_dssp SHHHHHHHHHTSTTSCCSCEECCBCTTCHHHHHHHHHTC--CSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHH
T ss_pred HHHHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHHhC--CCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHH
Confidence 35555 7777776666542 2111223556677776642 233311 21 112222111 113577
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.++.++.++++|+.+..+.+ .|+.--+...+.+...++
T Consensus 276 ~~~~i~~~A~~~g~~~~~~~~---~es~i~~~a~~~laa~~~ 314 (369)
T 2p8b_A 276 PAVKLAHQAEMAGIECQVGSM---VESSVASSAGFHVAFSKK 314 (369)
T ss_dssp HHHHHHHHHHHTTCEEEECCS---SCCHHHHHHHHHHHTTCT
T ss_pred HHHHHHHHHHHcCCcEEecCC---CccHHHHHHHHHHHHcCC
Confidence 888999999999998755432 577767777777776663
No 377
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=40.42 E-value=22 Score=33.66 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhC-C-CCCHHHHHHHHHHHHHcCC
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKII-T-TRSYDERLETLKHVREAGI 233 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~-~-~~s~~~~l~~i~~a~~~Gi 233 (386)
.+..+.+.+..+++.|+. +.+++-.-.. ...|-+... |..+. + -.+.++..+.++.||+.||
T Consensus 19 ~~~gi~~~ldyl~~lGv~~i~l~Pi~~~~------~~~gY~~~d---------~~~id~~~~Gt~~d~~~lv~~~h~~Gi 83 (405)
T 1ht6_A 19 WYNMMMGKVDDIAAAGVTHVWLPPPSHSV------SNEGYMPGR---------LYDIDASKYGNAAELKSLIGALHGKGV 83 (405)
T ss_dssp HHHHHHTTHHHHHHTTCCEEEECCCSCBS------STTSSSBCC---------TTCGGGCTTCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHcCCCEEEeCCCccCC------CCCCCCccc---------cccCCCccCCCHHHHHHHHHHHHHCCC
Confidence 466777777778888876 4554422111 012222111 22233 3 2478899999999999999
Q ss_pred eeeEeEEeec
Q 016599 234 NVCSGGIIGL 243 (386)
Q Consensus 234 ~v~~~~i~Gl 243 (386)
+|-.++++.+
T Consensus 84 ~VilD~V~NH 93 (405)
T 1ht6_A 84 QAIADIVINH 93 (405)
T ss_dssp EEEEEECCSB
T ss_pred EEEEEECcCc
Confidence 9999999988
No 378
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=40.20 E-value=81 Score=29.62 Aligned_cols=81 Identities=15% Similarity=0.083 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHhhcCcEEEEe-cCCCCHHHHHHHHHhccCeeeccc-C---chHHHHhhh--------CC----CCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEVCCT-LGMLEKHQAIELKKAGLTAYNHNL-D---TSREFYSKI--------IT----TRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t-~g~l~~e~l~~Lk~aG~~~v~i~l-e---~~~~~~~~i--------~~----~~s~~ 219 (386)
..++..++++.+.+.++...-. ...-+.+.+++|++.- .+++.. | +..+..+.+ .. -....
T Consensus 211 ~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GGit 288 (388)
T 3tcs_A 211 TPDRAIEVGHMLQDHGFCHFEEPCPYWELAQTKQVTDAL--DIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGGIC 288 (388)
T ss_dssp CHHHHHHHHHHHHHTTCCEEECCSCTTCHHHHHHHHHHC--SSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTSHH
T ss_pred CHHHHHHHHHHHhhcCCeEEECCCCccCHHHHHHHHHhc--CCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCCHH
Confidence 3466677777777666542111 1223456666666541 123211 1 111111111 11 12466
Q ss_pred HHHHHHHHHHHcCCeeeEeE
Q 016599 220 ERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~ 239 (386)
+.++....+...|+.+..+.
T Consensus 289 ~a~kia~~A~~~gv~~~~h~ 308 (388)
T 3tcs_A 289 RTLRVVEMARAAGLPVTPHC 308 (388)
T ss_dssp HHHHHHHHHHHTTCCBCCCC
T ss_pred HHHHHHHHHHHcCCEEEecC
Confidence 77777777888888766554
No 379
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=40.15 E-value=1.5e+02 Score=27.99 Aligned_cols=78 Identities=14% Similarity=0.115 Sum_probs=47.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCC-CCChhhHHHHHHHHHHHhhc---CcEEEEe-cCCCCHHH----HHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRKTNFNQILEYVKDIRDM---GMEVCCT-LGMLEKHQ----AIELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~-~ge~~~~~~l~~~i~~ik~~---g~~i~~t-~g~l~~e~----l~~Lk~ 192 (386)
.+++++.+.++.+.+.|.+.|-+.|..... ...+...+.-.+.++++++. ++.+.+. |+-.+.+. ++.|.+
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~~~~~~~A~~~~~~L~~ 203 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKLNGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHGRVSAPMAKVLIKELEP 203 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEEESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCSCBCHHHHHHHHHHHGG
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCCCCCHHHHHHHHHHHHh
Confidence 478999999999999999999884421100 00122456677788888753 3444443 44445443 455566
Q ss_pred hccCeee
Q 016599 193 AGLTAYN 199 (386)
Q Consensus 193 aG~~~v~ 199 (386)
+|+..+-
T Consensus 204 ~~i~~iE 210 (405)
T 3rr1_A 204 YRPLFIE 210 (405)
T ss_dssp GCCSCEE
T ss_pred cCCCEEE
Confidence 6777665
No 380
>1i60_A IOLI protein; beta barrel, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: c.1.15.4 PDB: 1i6n_A
Probab=40.15 E-value=1.8e+02 Score=24.90 Aligned_cols=83 Identities=7% Similarity=0.027 Sum_probs=47.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCC-CCChhhHHHHHHHHHHH----hhcCcEEEEecCC------CC-HHHHHHH
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDT-IGRKTNFNQILEYVKDI----RDMGMEVCCTLGM------LE-KHQAIEL 190 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~-~ge~~~~~~l~~~i~~i----k~~g~~i~~t~g~------l~-~e~l~~L 190 (386)
..+.+.+.++.+...|++.+.+..+..+. ......++.+.+.++.+ ++.|+.+.+.|-. .+ .+..+.+
T Consensus 82 ~~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~l~ 161 (278)
T 1i60_A 82 IITEFKGMMETCKTLGVKYVVAVPLVTEQKIVKEEIKKSSVDVLTELSDIAEPYGVKIALEFVGHPQCTVNTFEQAYEIV 161 (278)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECCBCSSCCCHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCCTTBSSCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEecCCccchhcCHHHHHHHH
Confidence 46777788888888999988775443221 11123344555555443 4568887665321 23 4444555
Q ss_pred HHhccCeeecccCch
Q 016599 191 KKAGLTAYNHNLDTS 205 (386)
Q Consensus 191 k~aG~~~v~i~le~~ 205 (386)
++.+-..+.+-+|+.
T Consensus 162 ~~~~~~~~g~~~D~~ 176 (278)
T 1i60_A 162 NTVNRDNVGLVLDSF 176 (278)
T ss_dssp HHHCCTTEEEEEEHH
T ss_pred HHhCCCCeeEEEEeE
Confidence 555655676666665
No 381
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=40.15 E-value=38 Score=31.91 Aligned_cols=39 Identities=21% Similarity=0.194 Sum_probs=24.8
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHH
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTL 257 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l 257 (386)
....+.++.++.+++.|+.+..+.++ |+.=-....+.+.
T Consensus 287 GGit~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hla 325 (393)
T 1wuf_A 287 GGMSSALKIAEYCALNEILVWCGGML---EAGVGRAHNIALA 325 (393)
T ss_dssp TSHHHHHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHHHH
Confidence 46888889999999999987554333 3432334444443
No 382
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=40.11 E-value=2.1e+02 Score=25.88 Aligned_cols=70 Identities=24% Similarity=0.331 Sum_probs=43.6
Q ss_pred HHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC-----------------CCCHHHHHHH-HHhc
Q 016599 133 KAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG-----------------MLEKHQAIEL-KKAG 194 (386)
Q Consensus 133 ~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g-----------------~l~~e~l~~L-k~aG 194 (386)
.+.+.|++.+-+-++.. ++ ..+.+...++++..+..|+.+....| .-+++.+.++ ++.|
T Consensus 92 ~ai~~GFtSVMiDgS~~-p~--eeNi~~Tk~vv~~ah~~gvsVEaELG~igG~Ed~~~~~~~~~~yT~Peea~~Fv~~Tg 168 (307)
T 3n9r_A 92 KAVKAGFTSVMIDASHH-AF--EENLELTSKVVKMAHNAGVSVEAELGRLMGIEDNISVDEKDAVLVNPKEAEQFVKESQ 168 (307)
T ss_dssp HHHHHTCSEEEECCTTS-CH--HHHHHHHHHHHHHHHHTTCEEEEEESCCCCC----------CCSCCHHHHHHHHHHHC
T ss_pred HHHHhCCCcEEEECCCC-CH--HHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcccccccccCCCHHHHHHHHHHHC
Confidence 44567999987755432 21 24566677777777776665432221 1356666665 5689
Q ss_pred cCeeecccCch
Q 016599 195 LTAYNHNLDTS 205 (386)
Q Consensus 195 ~~~v~i~le~~ 205 (386)
+|.+.+++=+.
T Consensus 169 vD~LAvaiGt~ 179 (307)
T 3n9r_A 169 VDYLAPAIGTS 179 (307)
T ss_dssp CSEEEECSSCC
T ss_pred CCEEEEecCCc
Confidence 99998877654
No 383
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=40.10 E-value=58 Score=30.71 Aligned_cols=99 Identities=7% Similarity=-0.089 Sum_probs=51.5
Q ss_pred hhHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeeccc-Cch---HHHHhhh------------CCCCCH
Q 016599 156 TNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNL-DTS---REFYSKI------------ITTRSY 218 (386)
Q Consensus 156 ~~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~~---~~~~~~i------------~~~~s~ 218 (386)
...++..++++.+.+.++. +.-....-+.+.++++++.- .+++.. |+. .+..+.+ .+-...
T Consensus 221 ~~~~~A~~~~~~L~~~~i~~iEeP~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGi 298 (400)
T 4dxk_A 221 WQLLPAMQIAKALTPYQTFWHEDPIKMDSLSSLTRYAAVS--PAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGL 298 (400)
T ss_dssp BCHHHHHHHHHHTGGGCCSEEECCBCTTSGGGHHHHHHHC--SSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHH
T ss_pred CCHHHHHHHHHHHhhcCCCEEEcCCCcccHHHHHHHHHhC--CCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCH
Confidence 3457777777877776654 22111222445566666541 233322 221 1111111 112247
Q ss_pred HHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 219 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.++....+..+|+.+..+... +.=-+...+++...+
T Consensus 299 t~~~kia~~A~~~gi~~~~h~~~----s~i~~aa~~hlaaa~ 336 (400)
T 4dxk_A 299 SEARKIASMAEAWHLPVAPHXCT----GPVVLCASTHLSLNA 336 (400)
T ss_dssp HHHHHHHHHHHHTTCCEEEC-CC----CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCEEEecCCC----ChHHHHHHHHHHHhC
Confidence 78888888899999987765432 222344555666555
No 384
>2ze3_A DFA0005; organic waste LEFT-OVER decomposition, alkaliphilic, ICL/PEPM superfamily, alpha-ketoglutarate LIG isomerase; HET: AKG; 1.65A {Deinococcus ficus}
Probab=40.10 E-value=1.1e+02 Score=27.40 Aligned_cols=68 Identities=15% Similarity=0.124 Sum_probs=42.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe--cCCCCHHHHHHHHHhccCeeecc
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT--LGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t--~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.+++++.++.+.+.|...+++-+- ...+.+.++.+.++ +++.++ ++.++ .++|++.|+.++.++
T Consensus 167 ~~~ai~Ra~ay~eAGAd~i~~e~~--------~~~~~~~~i~~~~~---~P~n~~~~~~~~~---~~eL~~lGv~~v~~~ 232 (275)
T 2ze3_A 167 LAETVRRGQAYADAGADGIFVPLA--------LQSQDIRALADALR---VPLNVMAFPGSPV---PRALLDAGAARVSFG 232 (275)
T ss_dssp HHHHHHHHHHHHHTTCSEEECTTC--------CCHHHHHHHHHHCS---SCEEEECCTTSCC---HHHHHHTTCSEEECT
T ss_pred HHHHHHHHHHHHHCCCCEEEECCC--------CCHHHHHHHHHhcC---CCEEEecCCCCCC---HHHHHHcCCcEEEEC
Confidence 688888888888889887766431 12234444444442 343333 23344 478888899999887
Q ss_pred cCch
Q 016599 202 LDTS 205 (386)
Q Consensus 202 le~~ 205 (386)
.-.+
T Consensus 233 ~~~~ 236 (275)
T 2ze3_A 233 QSLM 236 (275)
T ss_dssp THHH
T ss_pred hHHH
Confidence 6544
No 385
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=40.09 E-value=1.6e+02 Score=26.12 Aligned_cols=29 Identities=28% Similarity=0.211 Sum_probs=24.2
Q ss_pred cEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 173 MEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 173 ~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+++.+-.|.-+++.+....+.|++.|.++
T Consensus 179 vPVI~~GGI~tpsDAa~AmeLGAdgVlVg 207 (268)
T 2htm_A 179 PPVVVDAGLGLPSHAAEVMELGLDAVLVN 207 (268)
T ss_dssp SCBEEESCCCSHHHHHHHHHTTCCEEEES
T ss_pred CeEEEeCCCCCHHHHHHHHHcCCCEEEEC
Confidence 67767788888999999999999988875
No 386
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=39.99 E-value=1.1e+02 Score=28.75 Aligned_cols=71 Identities=13% Similarity=0.119 Sum_probs=42.4
Q ss_pred HHHHHHHcCCcEEEEecccC--------CCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 130 AAQKAKEAGSTRFCMGAAWR--------DTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~--------~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.++.+.+.|++.|.+++++. ...|.| .++.+.++.+.++..++++...-|..+.+.+.++..+|++.+.++
T Consensus 207 ~a~~a~~~Gad~I~vg~~~G~~~~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~V~iG 285 (404)
T 1eep_A 207 AALDLISVGADCLKVGIGPGSICTTRIVAGVGVP-QITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADSVMIG 285 (404)
T ss_dssp HHHHHHTTTCSEEEECSSCSTTSHHHHHHCCCCC-HHHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHhcCCCEEEECCCCCcCcCccccCCCCcc-hHHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCHHhhC
Confidence 34455667888887732110 001222 223333333323345788888889888888888888999998874
No 387
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=39.96 E-value=1.6e+02 Score=25.46 Aligned_cols=69 Identities=10% Similarity=0.029 Sum_probs=46.8
Q ss_pred CHHHHHHHHHHHHH-cCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c-CcEEEEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+++.+.+.++...+ .|..-|++.+.+ .+. ..++++++++ . ++++.+--|..+.+.++.+.+ |+|.+.
T Consensus 147 ~~e~~~~~a~~g~~~l~~~~Vyl~~~G-----~~~----~~~~i~~i~~~~~~~Pv~vGgGI~s~e~a~~~~~-gAd~VI 216 (234)
T 2f6u_A 147 DKELAASYALVGEKLFNLPIIYIEYSG-----TYG----NPELVAEVKKVLDKARLFYGGGIDSREKAREMLR-YADTII 216 (234)
T ss_dssp CHHHHHHHHHHHHHTTCCSEEEEECTT-----SCC----CHHHHHHHHHHCSSSEEEEESCCCSHHHHHHHHH-HSSEEE
T ss_pred CHHHHHHHHHhhhhhcCCCEEEEeCCC-----Ccc----hHHHHHHHHHhCCCCCEEEEecCCCHHHHHHHHh-CCCEEE
Confidence 56666666666553 444556665522 111 3455666653 3 678888899999999999999 999998
Q ss_pred cc
Q 016599 200 HN 201 (386)
Q Consensus 200 i~ 201 (386)
++
T Consensus 217 VG 218 (234)
T 2f6u_A 217 VG 218 (234)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 388
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=39.87 E-value=1.6e+02 Score=26.84 Aligned_cols=120 Identities=10% Similarity=-0.012 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .++
T Consensus 52 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~ 127 (332)
T 2r8w_A 52 VDIEAFSALIARLDAAEVDSVGILGST----GIYMYLTREERRRAIEAAATILRGRRTLMAGIGALRTDEAVALAKDAEA 127 (332)
T ss_dssp BCHHHHHHHHHHHHHHTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 789999999999999999998875532 332 344555566655543 23666555454 44555444 456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEe---ecCCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .++++-..-+. |..-+.+.+.++
T Consensus 128 ~Gadavlv~~P~Y-------~-~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~L 184 (332)
T 2r8w_A 128 AGADALLLAPVSY-------T-PLTQEEAYHHFAAVAGATALPLAIYNNPTTTRFTFSDELLVRL 184 (332)
T ss_dssp HTCSEEEECCCCS-------S-CCCHHHHHHHHHHHHHHCSSCEEEECCHHHHCCCCCHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCcCCCHHHHHHH
Confidence 7999887633221 1 1255666666666444 46665443332 223455554444
No 389
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=39.86 E-value=1.4e+02 Score=25.89 Aligned_cols=69 Identities=13% Similarity=0.097 Sum_probs=44.9
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c-CcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
+++.+.+.++...-.+..-+++.+. |.+. ..++++++++ . ++++.+--|..+++.++.+.+ |+|.+.+
T Consensus 140 ~~~~~~~~a~~g~~~~~~~VYl~s~-----G~~~----~~~~i~~i~~~~~~~Pv~vGgGI~t~e~a~~~~~-gAd~VIV 209 (240)
T 1viz_A 140 NMDDIVAYARVSELLQLPIFYLEYS-----GVLG----DIEAVKKTKAVLETSTLFYGGGIKDAETAKQYAE-HADVIVV 209 (240)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECT-----TSCC----CHHHHHHHHHTCSSSEEEEESSCCSHHHHHHHHT-TCSEEEE
T ss_pred CHHHHHHHHHhCcccCCCEEEEeCC-----CccC----hHHHHHHHHHhcCCCCEEEEeccCCHHHHHHHHh-CCCEEEE
Confidence 3555555544432234445666552 2111 3456666664 3 678888899999999999998 9999987
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
+
T Consensus 210 G 210 (240)
T 1viz_A 210 G 210 (240)
T ss_dssp C
T ss_pred C
Confidence 5
No 390
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=39.74 E-value=67 Score=30.16 Aligned_cols=33 Identities=15% Similarity=0.268 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHhhcCcE---EEEecCCCCHHHHHHH
Q 016599 157 NFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIEL 190 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~---i~~t~g~l~~e~l~~L 190 (386)
..+++.++++.+.+. .. ++-|.|..++..+..+
T Consensus 143 ~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~l 178 (382)
T 2ztj_A 143 EEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYAL 178 (382)
T ss_dssp CHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHH
T ss_pred CHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHH
Confidence 345666666666655 43 3345666665554444
No 391
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=39.69 E-value=20 Score=34.31 Aligned_cols=54 Identities=13% Similarity=0.065 Sum_probs=40.1
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeec-CCC----------HHHHHHHHHHHhcCCCCCCeEeeee
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGL-GEA----------EEDRVGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get----------~ed~~~~l~~l~~l~~~~~~v~~~~ 271 (386)
.+.++..+.++.||+.||+|-.++++.+ ++. .+.+.+.+.+-.+.| ++-+.+-.
T Consensus 79 Gt~~d~~~lv~~ah~~Gi~vilD~V~NH~s~~~wF~~q~~~Vr~~~~~~~~~Wl~~g--vDGfRlD~ 143 (424)
T 2dh2_A 79 GSKEDFDSLLQSAKKKSIRVILDLTPNYRGENSWFSTQVDTVATKVKDALEFWLQAG--VDGFQVRD 143 (424)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEECCTTTTSSSTTCSSCHHHHHHHHHHHHHHHHHHT--CCEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECCCcCCCcccccccCHHHHHHHHHHHHHHHHcC--CCEEEEec
Confidence 4688888999999999999999999987 532 245666666655564 67766643
No 392
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=39.69 E-value=2.1e+02 Score=25.77 Aligned_cols=115 Identities=9% Similarity=-0.045 Sum_probs=67.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCCCCHHHHHHH---HHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGMLEKHQAIEL---KKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~l~~e~l~~L---k~a 193 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|..+.+.++.. +++
T Consensus 30 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg~~t~~ai~la~~A~~~ 105 (316)
T 3e96_A 30 IDWHHYKETVDRIVDNGIDVIVPCGNT----SEFYALSLEEAKEEVRRTVEYVHGRALVVAGIGYATSTAIELGNAAKAA 105 (316)
T ss_dssp BCHHHHHHHHHHHHTTTCCEECTTSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCccc----cCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeCcCHHHHHHHHHHHHhc
Confidence 788999999999999999998764421 332 334555555555542 24666555555556655544 556
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeecCCCHHH
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEED 249 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed 249 (386)
|+|.+.+-.-- | ...+.+..++-.+.+.+ .++++-.--+ |..-+.+.
T Consensus 106 Gadavlv~~P~----y----~~~s~~~l~~~f~~va~a~~lPiilYn~-g~~l~~~~ 153 (316)
T 3e96_A 106 GADAVMIHMPI----H----PYVTAGGVYAYFRDIIEALDFPSLVYFK-DPEISDRV 153 (316)
T ss_dssp TCSEEEECCCC----C----SCCCHHHHHHHHHHHHHHHTSCEEEEEC-CTTSCTHH
T ss_pred CCCEEEEcCCC----C----CCCCHHHHHHHHHHHHHhCCCCEEEEeC-CCCCCHHH
Confidence 99988763211 1 12256666666666544 3676433222 44445443
No 393
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=39.60 E-value=1.3e+02 Score=26.83 Aligned_cols=120 Identities=11% Similarity=0.044 Sum_probs=69.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHHHHH---
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIELKK--- 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~Lk~--- 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++..+.
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~ 94 (292)
T 2ojp_A 19 VCRASLKKLIDYHVASGTSAIVSVGTT----GESATLNHDEHADVVMMTLDLADGRIPVIAGTGANATAEAISLTQRFND 94 (292)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTT
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCccHHHHHHHHHHHHh
Confidence 788999999999999999998775532 332 344555555555442 23566555554 45666666554
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEee---cCCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIG---LGEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~G---lget~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-..-+.+ ..-+.+.+.++
T Consensus 95 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 151 (292)
T 2ojp_A 95 SGIVGCLTVTPYY-------N-RPSQEGLYQHFKAIAEHTDLPQILYNVPSRTGCDLLPETVGRL 151 (292)
T ss_dssp SSCSEEEEECCCS-------S-CCCHHHHHHHHHHHHTTCSSCEEEECCHHHHSCCCCHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCcchhccCCCHHHHHHH
Confidence 4888876532111 1 1256666666666554 366654333322 23354544444
No 394
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=39.46 E-value=71 Score=29.72 Aligned_cols=127 Identities=7% Similarity=0.079 Sum_probs=65.4
Q ss_pred CHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
++++-++.++.+.+ .|-+ .+.+-. +.....+...++++.+.+.++. +.-....-+.+.+++|++.- .+.
T Consensus 170 ~~~~di~~v~avr~~~g~~~~l~vDa------N~~~~~~~A~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~--~ip 241 (378)
T 4hpn_A 170 GVEEDLRVIAAVREAIGPDMRLMIDA------NHGYTVTEAITLGDRAAGFGIDWFEEPVVPEQLDAYARVRAGQ--PIP 241 (378)
T ss_dssp CHHHHHHHHHHHHHHHTTTSEEEEEC------TTCCCHHHHHHHHHHHGGGCCSCEECCSCTTCHHHHHHHHHHS--SSC
T ss_pred ChHHHHHHHHHHHHhcCCcEEEEEec------CcccCHHHHHHHHhhhhhcccchhhcCCCccchhhhHHHHhhC--Cce
Confidence 55655555555554 3432 333321 1123457777788888777665 22222234566677776542 233
Q ss_pred ccc-C---chHHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 200 HNL-D---TSREFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 200 i~l-e---~~~~~~~~i~------------~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
+.. | +..+..+.+. +-....+.++....+.++|+.+..++ .++.=.....++++..+.
T Consensus 242 Ia~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~v~~h~----~~~~i~~aa~~h~~aa~~ 315 (378)
T 4hpn_A 242 VAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEIQKIATLATLHGVRIVPHV----WGTGVQIAAALQFMAAMT 315 (378)
T ss_dssp EEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHHHHHHHHHHHHTCEECCBC----CSSHHHHHHHHHHHHHCC
T ss_pred eeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHHHHHHHHHHHcCCeEEeCC----CCcHHHHHHHHHHHHHcC
Confidence 322 1 1122222221 12347888888899999999864432 233334455566665553
No 395
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=39.46 E-value=46 Score=31.63 Aligned_cols=43 Identities=9% Similarity=-0.042 Sum_probs=27.2
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
....+.++....+.++|+.+..+.+.. .+.=-....+.+...+
T Consensus 307 GGite~~~ia~~A~~~gi~v~~h~~~~--~s~i~~aa~~hl~aa~ 349 (421)
T 4hnl_A 307 GGITPALKLAHFCDAMGVRIAWHTPSD--ISPVGLAVNTHLNIHL 349 (421)
T ss_dssp TSHHHHHHHHHHHHHTTCEECCCCCSS--SCHHHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHCCCeEEEeCCcc--hhHHHHHHHHHHHHhC
Confidence 357888888889999998877655431 1323344455555555
No 396
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=39.43 E-value=1.5e+02 Score=29.01 Aligned_cols=72 Identities=14% Similarity=0.085 Sum_probs=46.0
Q ss_pred HHHHHHcCCcEEEEeccc-CCCCCChhhHHHHHHHHHHHhh----cCcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 131 AQKAKEAGSTRFCMGAAW-RDTIGRKTNFNQILEYVKDIRD----MGMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~-~~~~ge~~~~~~l~~~i~~ik~----~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
++.+.+.|++.|.+.+.+ +...+.+..++.+.++.+.+++ ..+++..+-|..+.+.+.+...+|++.|.++=
T Consensus 357 A~~a~~aGad~I~vs~hgG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iGr 433 (511)
T 1kbi_A 357 VIKAAEIGVSGVVLSNHGGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLGR 433 (511)
T ss_dssp HHHHHHTTCSEEEECCTTTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEECH
T ss_pred HHHHHHcCCCEEEEcCCCCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 445667888888885432 1111223345556565555542 25788888888887776666679999998863
No 397
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=39.33 E-value=1.3e+02 Score=26.78 Aligned_cols=107 Identities=10% Similarity=0.069 Sum_probs=64.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~ 94 (291)
T 3tak_A 19 VDWKSLEKLVEWHIEQGTNSIVAVGTT----GEASTLSMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKD 94 (291)
T ss_dssp BCHHHHHHHHHHHHHHTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----cccccCCHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHh
Confidence 788999999999999999998775532 332 344555566655543 23566555554 4455444 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEE
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGI 240 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i 240 (386)
+|+|.+.+-.-.+ . +.+-+..++-.+.+.+ .++++-..-+
T Consensus 95 ~Gadavlv~~P~y-------~-~~~~~~l~~~f~~ia~a~~lPiilYn~ 135 (291)
T 3tak_A 95 LGADAALLVTPYY-------N-KPTQEGLYQHYKAIAEAVELPLILYNV 135 (291)
T ss_dssp HTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred cCCCEEEEcCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEec
Confidence 7999887632111 1 1245666666666544 4777554433
No 398
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=39.33 E-value=1.1e+02 Score=29.08 Aligned_cols=106 Identities=16% Similarity=0.249 Sum_probs=59.2
Q ss_pred HHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcE---EEEecCCCCHHHHHHHHHhccCe--ee
Q 016599 125 DAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME---VCCTLGMLEKHQAIELKKAGLTA--YN 199 (386)
Q Consensus 125 eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~---i~~t~g~l~~e~l~~Lk~aG~~~--v~ 199 (386)
+.+.+.++.+++.|.. +.+... .. . ....++++++++.+.+.|.. ++-|.|..++..+..+.+.=... +.
T Consensus 151 ~~~~~~v~~ak~~G~~-V~~~~e-da-~--r~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~~ 225 (423)
T 3ivs_A 151 DSATEVINFVKSKGIE-VRFSSE-DS-F--RSDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCD 225 (423)
T ss_dssp HHHHHHHHHHHTTTCE-EEEEEE-SG-G--GSCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSSE
T ss_pred HHHHHHHHHHHHCCCE-EEEEEc-cC-c--CCCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcCCe
Confidence 4444456666777763 444321 11 1 13456788888888877754 45678988887766664431111 22
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGE 245 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glge 245 (386)
+++ +...++.-.+...-.+.++|...--+.+.|+||
T Consensus 226 i~~----------H~Hnd~GlAvAN~laAv~aGa~~vd~ti~GlGE 261 (423)
T 3ivs_A 226 IEC----------HFHNDTGMAIANAYCALEAGATHIDTSILGIGE 261 (423)
T ss_dssp EEE----------EEBCTTSCHHHHHHHHHHTTCCEEEEBGGGCSS
T ss_pred EEE----------EECCCCchHHHHHHHHHHhCCCEEEEecccccC
Confidence 222 212233333444456667898855556778876
No 399
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=39.31 E-value=1.7e+02 Score=26.31 Aligned_cols=121 Identities=11% Similarity=0.050 Sum_probs=69.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~~st~~ai~la~~A~~ 105 (306)
T 1o5k_A 30 LDLESYERLVRYQLENGVNALIVLGTT----GESPTVNEDEREKLVSRTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEK 105 (306)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEESSGG----GTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHh
Confidence 688899999999999999998775432 332 334555555555442 23566555554 44555444 456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeec---CCCHHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGLL 254 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~l 254 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-..-+.+. .-+.+.+.++.
T Consensus 106 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 163 (306)
T 1o5k_A 106 LGANGVLVVTPYY-------N-KPTQEGLYQHYKYISERTDLGIVVYNVPGRTGVNVLPETAARIA 163 (306)
T ss_dssp HTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHTTCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhCCCCEEEEeCccccCcCCCHHHHHHHH
Confidence 6999887632211 1 1255666666666554 3666544333332 34555555553
No 400
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=39.22 E-value=1.3e+02 Score=27.26 Aligned_cols=107 Identities=13% Similarity=0.071 Sum_probs=62.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 26 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~ 101 (309)
T 3fkr_A 26 LDLASQKRAVDFMIDAGSDGLCILANF----SEQFAITDDERDVLTRTILEHVAGRVPVIVTTSHYSTQVCAARSLRAQQ 101 (309)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cCcccCCHHHHHHHHHHHHHHhCCCCcEEEecCCchHHHHHHHHHHHHH
Confidence 789999999999999999998875532 332 334555555555443 24566655554 4455544 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeE
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCS 237 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~ 237 (386)
+|+|.+.+-.-- |... .+.+.+..++-.+.+.+ .++++-.
T Consensus 102 ~Gadavlv~~Py----y~~~-~~~s~~~l~~~f~~va~a~~lPiil 142 (309)
T 3fkr_A 102 LGAAMVMAMPPY----HGAT-FRVPEAQIFEFYARVSDAIAIPIMV 142 (309)
T ss_dssp TTCSEEEECCSC----BTTT-BCCCHHHHHHHHHHHHHHCSSCEEE
T ss_pred cCCCEEEEcCCC----CccC-CCCCHHHHHHHHHHHHHhcCCCEEE
Confidence 699888763211 1100 01256666666666544 4776543
No 401
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=39.19 E-value=59 Score=33.50 Aligned_cols=53 Identities=19% Similarity=0.510 Sum_probs=37.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC-------CCCC----hhhH-HHHHHHHHHHhhcCcE
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD-------TIGR----KTNF-NQILEYVKDIRDMGME 174 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~-------~~ge----~~~~-~~l~~~i~~ik~~g~~ 174 (386)
.+.+.|++.++.+++.|+..|+|-.||.. ..|+ +..+ .-+..+++.+++.|++
T Consensus 343 ~~e~~i~~~ad~aa~lG~e~fviDDGWf~~r~~d~~~lGdW~~d~~kFP~Glk~Lad~vh~~Gmk 407 (729)
T 4fnq_A 343 FNEEKLVNIAKTEAELGIELFVLDDGWFGKRDDDRRSLGDWIVNRRKLPNGLDGLAKQVNELGMQ 407 (729)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECSCCBTTCCSTTSCTTCCSBCTTTCTTHHHHHHHHHHHTTCE
T ss_pred CCHHHHHHHHHHHHhcCccEEEEcceeecCCCCCcccCCcEEEChhhcCccHHHHHHHHHHCCCE
Confidence 56889999999999999999998766522 1111 1122 3477888888888877
No 402
>2agk_A 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide...; TIM alpha/beta barrel; HET: CIT; 1.30A {Saccharomyces cerevisiae}
Probab=39.07 E-value=80 Score=27.81 Aligned_cols=200 Identities=11% Similarity=-0.074 Sum_probs=0.0
Q ss_pred HHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHHhccCeeecccCch-
Q 016599 128 MQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTS- 205 (386)
Q Consensus 128 ~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~- 205 (386)
++.++.+.+.|++.+++.--.. .-.+.++++. +..+++.+--|.-+. .++.+. +|++.|.++-..+
T Consensus 41 ~~~A~~~~~~Ga~~l~vvDL~~----------~n~~~i~~i~~~~~~pv~vgGGir~~-~~~~~l-~Ga~~Viigs~a~~ 108 (260)
T 2agk_A 41 SYYAKLYKDRDVQGCHVIKLGP----------NNDDAAREALQESPQFLQVGGGINDT-NCLEWL-KWASKVIVTSWLFT 108 (260)
T ss_dssp HHHHHHHHHTTCTTCEEEEESS----------SCHHHHHHHHHHSTTTSEEESSCCTT-THHHHT-TTCSCEEECGGGBC
T ss_pred HHHHHHHHHcCCCEEEEEeCCC----------CCHHHHHHHHhcCCceEEEeCCCCHH-HHHHHh-cCCCEEEECcHHHh
Q ss_pred HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEe---------EEeecCCCHHHHHHHH-HHHhcCCCCCCeEeeeeeeec
Q 016599 206 REFYSKIITTRSYDERLETLKHVREAGINVCSG---------GIIGLGEAEEDRVGLL-HTLATLPTHPESVPINALLAV 275 (386)
Q Consensus 206 ~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~---------~i~Glget~ed~~~~l-~~l~~l~~~~~~v~~~~f~P~ 275 (386)
++ ....++...+.++...+..+-+..+ .+...|.....-.+.. ++++.+ .+. +..++-+
T Consensus 109 ~~------g~~~p~~~~~~~~~~g~~~ivv~iD~k~~~~~g~~V~~~gw~~~t~~~~~~e~a~~~---~~~--a~~il~t 177 (260)
T 2agk_A 109 KE------GHFQLKRLERLTELCGKDRIVVDLSCRKTQDGRWIVAMNKWQTLTDLELNADTFREL---RKY--TNEFLIH 177 (260)
T ss_dssp TT------CCBCHHHHHHHHHHHCGGGEEEEEEEEEEETTEEEEEETTTTEEEEEEESHHHHHHH---TTT--CSEEEEE
T ss_pred hc------CCCCHHHHHHHHHHhCcCcEEEEEEeeecCCCceEEEEcCCccccCccHHHHHHHHH---HHh--cCEEEEE
Q ss_pred CCCCCCCCCCCCHHHHHHHHHHH----HHhCCCcceeecCcccccChhHHHhhhhc--CccccccCCcc-ccCCC-CChh
Q 016599 276 KGTPLQDQKPVEIWEMIRMIATA----RIVMPKAMVRLSAGRVRFSMPEQALCFLA--GANSIFTGEKL-LTTPN-NDFD 347 (386)
Q Consensus 276 ~gT~l~~~~~~s~~e~~~~~a~~----R~~lp~~~i~i~~g~~~~~~~~~~~~l~~--Gan~~~~g~~~-~t~~~-~~~~ 347 (386)
.-+.-.....++.+-+.++.... . +.-+..|-+.--.+. ...+.. ||+.++.|..+ +-... .+++
T Consensus 178 ~i~~dG~~~G~d~eli~~l~~~~~~~~~------iPVIasGGi~s~ed~-~~l~~~~~G~~gvivg~al~l~~g~~~~~~ 250 (260)
T 2agk_A 178 AADVEGLCGGIDELLVSKLFEWTKDYDD------LKIVYAGGAKSVDDL-KLVDELSHGKVDLTFGSSLDIFGGNLVKFE 250 (260)
T ss_dssp C-------CCCCHHHHHHHHHHHTTCSS------CEEEEESCCCCTHHH-HHHHHHHTTCEEEECCTTBGGGTCSSBCHH
T ss_pred eeccccCcCCCCHHHHHHHHHhhcccCC------ceEEEeCCCCCHHHH-HHHHHhcCCCCEEEeeCCHHHcCCCCCCHH
Q ss_pred HHHHHHHHcC
Q 016599 348 ADQLMFKVLG 357 (386)
Q Consensus 348 ~~~~~i~~~G 357 (386)
+.++.+++.|
T Consensus 251 ~~~~~~~~~~ 260 (260)
T 2agk_A 251 DCCRWNEKQG 260 (260)
T ss_dssp HHHHHHHHHC
T ss_pred HHHHHHHhcC
No 403
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=39.06 E-value=1.2e+02 Score=29.28 Aligned_cols=69 Identities=13% Similarity=0.174 Sum_probs=44.1
Q ss_pred HHHHHcCCcEEEEecccCC--------CCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 132 QKAKEAGSTRFCMGAAWRD--------TIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~--------~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+.+.+.|++.|.+++++.. ..+.| ....+.++.+.+++.++++...-|..+.+.+.+...+|++.+.++
T Consensus 293 ~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p-~~~~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~iG 369 (494)
T 1vrd_A 293 EALIKAGADAVKVGVGPGSICTTRVVAGVGVP-QLTAVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMVG 369 (494)
T ss_dssp HHHHHTTCSEEEECSSCSTTCHHHHHHCCCCC-HHHHHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHcCCCEEEEcCCCCccccccccCCCCcc-HHHHHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEEC
Confidence 4555678888877432210 00112 233344444444455788888889988888888888999999875
No 404
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=39.05 E-value=1.9e+02 Score=26.03 Aligned_cols=106 Identities=13% Similarity=0.029 Sum_probs=63.0
Q ss_pred hhhHHHHHHHHHHHhhcCcEEE---EecCC---CCHHHHHHHHHhcc----CeeecccCchHHHHhhhCCCCCHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVC---CTLGM---LEKHQAIELKKAGL----TAYNHNLDTSREFYSKIITTRSYDERLET 224 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~---~t~g~---l~~e~l~~Lk~aG~----~~v~i~le~~~~~~~~i~~~~s~~~~l~~ 224 (386)
..+++.+.++++.+-+.|+... -+.|. ++.+.-+++.+.-+ .++.+-+- ....+.++.++.
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaG---------vg~~~t~~ai~l 102 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAG---------AGTYDTAHSIRL 102 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE---------CCCSCHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEe---------CCCCCHHHHHHH
Confidence 3678888899888877777632 23443 55555444433311 22222110 023478888999
Q ss_pred HHHHHHcCCee-eEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeee
Q 016599 225 LKHVREAGINV-CSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALL 273 (386)
Q Consensus 225 i~~a~~~Gi~v-~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~ 273 (386)
.+.+.++|..- -+...+-..-+.+++.++++.+.+- . .+++..|.
T Consensus 103 a~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a---~-~lPiilYn 148 (304)
T 3l21_A 103 AKACAAEGAHGLLVVTPYYSKPPQRGLQAHFTAVADA---T-ELPMLLYD 148 (304)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHTS---C-SSCEEEEE
T ss_pred HHHHHHcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh---c-CCCEEEEe
Confidence 99999999862 2222222345889999999888764 2 34555554
No 405
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=38.99 E-value=1e+02 Score=26.40 Aligned_cols=81 Identities=12% Similarity=0.042 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccCCCCCChhh-HHHHHHHHHHHhhcCcEEEEecC-----C-CC-HHHHHHHHHhcc
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTN-FNQILEYVKDIRDMGMEVCCTLG-----M-LE-KHQAIELKKAGL 195 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~-~~~l~~~i~~ik~~g~~i~~t~g-----~-l~-~e~l~~Lk~aG~ 195 (386)
.+.+.+.++.+...|++.+.+..+......-... .+.+.++.+.+++.|+.+.+.|- . .+ ++.++.+++.+
T Consensus 84 ~~~~~~~i~~a~~lG~~~v~~~~g~~~~~~~~~~~~~~l~~l~~~a~~~gv~l~~E~~~~~~~~~~~~~~~~~l~~~v~- 162 (272)
T 2q02_A 84 VKKTEGLLRDAQGVGARALVLCPLNDGTIVPPEVTVEAIKRLSDLFARYDIQGLVEPLGFRVSSLRSAVWAQQLIREAG- 162 (272)
T ss_dssp HHHHHHHHHHHHHHTCSEEEECCCCSSBCCCHHHHHHHHHHHHHHHHTTTCEEEECCCCSTTCSCCCHHHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHhCCCEEEEccCCCchhHHHHHHHHHHHHHHHHHHHcCCEEEEEecCCCcccccCHHHHHHHHHHhC-
Confidence 3556666677777888877764432211000112 33334444444556777655431 1 12 34444445556
Q ss_pred CeeecccCch
Q 016599 196 TAYNHNLDTS 205 (386)
Q Consensus 196 ~~v~i~le~~ 205 (386)
..+.+-+|+.
T Consensus 163 ~~~g~~~D~~ 172 (272)
T 2q02_A 163 SPFKVLLDTF 172 (272)
T ss_dssp CCCEEEEEHH
T ss_pred cCeEEEEEch
Confidence 5565556654
No 406
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=38.92 E-value=52 Score=31.38 Aligned_cols=100 Identities=9% Similarity=-0.003 Sum_probs=50.9
Q ss_pred hHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeecc----cCch---HHHHhh-----hC----CCCCHH
Q 016599 157 NFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHN----LDTS---REFYSK-----II----TTRSYD 219 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~----le~~---~~~~~~-----i~----~~~s~~ 219 (386)
..++..++++.+.+.++.. .-....-+.+.+++|++.- .+++. +.+. .+..+. +. +-....
T Consensus 234 ~~~~A~~~~~~Le~~~i~~iEqP~~~~d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~ll~~ga~d~v~~k~~~~GGit 311 (422)
T 3tji_A 234 FPQQAVQLAKQLEPFQPYFIEDILPPQQSAWLEQVRQQS--CVPLALGELFNNPAEWHDLIVNRRIDFIRCHVSQIGGIT 311 (422)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSCGGGGGGHHHHHHHC--CCCEEECTTCCSGGGTHHHHHTTCCSEECCCGGGGTSHH
T ss_pred CHHHHHHHHHHHHhhCCCeEECCCChhhHHHHHHHHhhC--CCCEEEeCCcCCHHHHHHHHhcCCCCEEecCccccCCHH
Confidence 4567777777777766542 1111112344556665531 12221 1111 122211 11 123577
Q ss_pred HHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 220 ERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 220 ~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.++....+...|+.+..+... .++.=-+...+.+...+
T Consensus 312 ~~~kia~lA~a~gv~v~~h~~~--~~s~Ig~aA~~hlaaa~ 350 (422)
T 3tji_A 312 PALKLAHLCQAFGVRLAWHGPG--DMTPIGVAVNTHLNIHL 350 (422)
T ss_dssp HHHHHHHHHHHTTCEECCCCCS--SSCHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHcCCEEEecCCC--CccHHHHHHHHHHHHhC
Confidence 8888888899999886655432 13433445556666555
No 407
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=38.90 E-value=75 Score=28.87 Aligned_cols=96 Identities=13% Similarity=0.064 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHHhhcCcEEEE---ecCC---CCHHHHHHHHHhcc---CeeecccCchHHHHhhhCCCCCHHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVCC---TLGM---LEKHQAIELKKAGL---TAYNHNLDTSREFYSKIITTRSYDERLETL 225 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~~---t~g~---l~~e~l~~Lk~aG~---~~v~i~le~~~~~~~~i~~~~s~~~~l~~i 225 (386)
..+++.+.++++.+-+.|+.-.+ |.|. ++.+.-+++.+.-+ .++.+=+-+ ...+.++.++..
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGv---------g~~~t~~ai~la 95 (313)
T 3dz1_A 25 KIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGV---------SAPGFAAMRRLA 95 (313)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEEC---------CCSSHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEec---------CCCCHHHHHHHH
Confidence 36788888998888777776322 3442 56554444433212 333321100 234788889999
Q ss_pred HHHHHcCCe-eeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 226 KHVREAGIN-VCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 226 ~~a~~~Gi~-v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.+.++|.. +-+.-.+ ..-+.+++.++++.+.+-
T Consensus 96 ~~A~~~Gadavlv~~P~-~~~s~~~l~~~f~~va~a 130 (313)
T 3dz1_A 96 RLSMDAGAAGVMIAPPP-SLRTDEQITTYFRQATEA 130 (313)
T ss_dssp HHHHHHTCSEEEECCCT-TCCSHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCEEEECCCC-CCCCHHHHHHHHHHHHHh
Confidence 999999986 3222223 335789999998888654
No 408
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=38.88 E-value=95 Score=27.95 Aligned_cols=97 Identities=11% Similarity=0.051 Sum_probs=58.1
Q ss_pred hhhHHHHHHHHHHHhhcCcEEEE---ecCC---CCHHHHHHHHHhcc----C-eeecccCchHHHHhhhCCCCCHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVCC---TLGM---LEKHQAIELKKAGL----T-AYNHNLDTSREFYSKIITTRSYDERLE 223 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~~---t~g~---l~~e~l~~Lk~aG~----~-~v~i~le~~~~~~~~i~~~~s~~~~l~ 223 (386)
..+++.+.++++.+-+.|+...+ |.|. ++.+.-+++.+.-+ . ++.+=+- ....+.++.++
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaG---------vg~~~t~~ai~ 94 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAG---------AGSNATHEAVG 94 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEE---------CCCSSHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEe---------CCCCCHHHHHH
Confidence 36778888888888777776333 3442 55554444433211 1 2322110 02347888899
Q ss_pred HHHHHHHcCCeeeEeE-EeecCCCHHHHHHHHHHHhcC
Q 016599 224 TLKHVREAGINVCSGG-IIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 224 ~i~~a~~~Gi~v~~~~-i~Glget~ed~~~~l~~l~~l 260 (386)
..+.+.++|..--.-+ .+-..-+.+++.++++.+.+-
T Consensus 95 la~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 132 (301)
T 3m5v_A 95 LAKFAKEHGADGILSVAPYYNKPTQQGLYEHYKAIAQS 132 (301)
T ss_dssp HHHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 9999999998632222 222255889999999888654
No 409
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=38.84 E-value=1.5e+02 Score=27.40 Aligned_cols=79 Identities=13% Similarity=-0.017 Sum_probs=54.1
Q ss_pred CCHHHHHHHHHHHHHcC-CcEEEEeccc-----------CC----------CCCChhhHHHHHHHHHHHhhc--CcEEEE
Q 016599 122 MTKDAVMQAAQKAKEAG-STRFCMGAAW-----------RD----------TIGRKTNFNQILEYVKDIRDM--GMEVCC 177 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G-~~~v~l~~g~-----------~~----------~~ge~~~~~~l~~~i~~ik~~--g~~i~~ 177 (386)
.+.+++.+.++.+.+.| ++.|.+.... .+ ..| +...+.-++.++++++. .+++..
T Consensus 204 ~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG-~~i~p~a~~~i~~v~~~~~~ipII~ 282 (354)
T 4ef8_A 204 FDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGG-RYVLPTALANINAFYRRCPGKLIFG 282 (354)
T ss_dssp CSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEG-GGGHHHHHHHHHHHHHHCTTSEEEE
T ss_pred CCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCC-CCCchHHHHHHHHHHHhCCCCCEEE
Confidence 46778877777777787 7776542100 00 012 23345667788888754 578888
Q ss_pred ecCCCCHHHHHHHHHhccCeeecc
Q 016599 178 TLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 178 t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+-|..+.+.+.++..+|++.|.++
T Consensus 283 ~GGI~s~~da~~~l~aGAd~V~vg 306 (354)
T 4ef8_A 283 CGGVYTGEDAFLHVLAGASMVQVG 306 (354)
T ss_dssp ESCCCSHHHHHHHHHHTEEEEEEC
T ss_pred ECCcCCHHHHHHHHHcCCCEEEEh
Confidence 889988888888888999998875
No 410
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=38.77 E-value=1.9e+02 Score=24.84 Aligned_cols=93 Identities=15% Similarity=0.120 Sum_probs=57.2
Q ss_pred hHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHH-HHHHHHcCCee
Q 016599 157 NFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLET-LKHVREAGINV 235 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~-i~~a~~~Gi~v 235 (386)
..+.+.+.++.+++.|+.+.+..--.....+..|....+|.|-++- .....+.........+++ +..+++.|+.+
T Consensus 137 ~~~~~~~~l~~l~~~G~~ialDdfG~g~ssl~~L~~l~~d~iKiD~----~~v~~~~~~~~~~~~~~~i~~~a~~~g~~v 212 (259)
T 3s83_A 137 DPERAAVILKTLRDAGAGLALDDFGTGFSSLSYLTRLPFDTLKIDR----YFVRTMGNNAGSAKIVRSVVKLGQDLDLEV 212 (259)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECC---CHHHHHHHHSCCCEEEECH----HHHHHTTTCHHHHHHHHHHHHHHHHTTCEE
T ss_pred CHHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHhCCCCEEEECH----HHHhhhhcCchHHHHHHHHHHHHHHCCCeE
Confidence 3467888889999999998776432345668888888888887753 222333333233444544 45677889875
Q ss_pred eEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 236 CSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 236 ~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
-+.. -||.++ ++.++++|
T Consensus 213 iaeG----VEt~~~----~~~l~~lG 230 (259)
T 3s83_A 213 VAEG----VENAEM----AHALQSLG 230 (259)
T ss_dssp EECC----CCSHHH----HHHHHHHT
T ss_pred EEEe----CCCHHH----HHHHHhcC
Confidence 4422 367554 45566775
No 411
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=38.77 E-value=1.9e+02 Score=24.78 Aligned_cols=178 Identities=16% Similarity=0.130 Sum_probs=102.3
Q ss_pred CCCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCC----CCH----HHHHHHHH
Q 016599 121 LMTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM----LEK----HQAIELKK 192 (386)
Q Consensus 121 ~~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~----l~~----e~l~~Lk~ 192 (386)
..+.++|.+.++++.+.|+..|++. |...+...+ .++..++.+++..|. .+. ...+.-.+
T Consensus 15 ~~t~~~i~~l~~~a~~~~~~aVcv~---------p~~v~~~~~---~l~~~~v~v~~vigFP~G~~~~~~k~~e~~~Ai~ 82 (220)
T 1ub3_A 15 TATLEEVAKAAEEALEYGFYGLCIP---------PSYVAWVRA---RYPHAPFRLVTVVGFPLGYQEKEVKALEAALACA 82 (220)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEECC---------GGGHHHHHH---HCTTCSSEEEEEESTTTCCSCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEEC---------HHHHHHHHH---HhCCCCceEEEEecCCCCCCchHHHHHHHHHHHH
Confidence 3689999999999999999999863 223333333 334445665443332 222 22344445
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcCCCCCCeEeeee
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPTHPESVPINA 271 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~~~~~v~~~~ 271 (386)
.|.|.|.+-+.-. .+ ..++++..++-|..++++--....-+|+-. --+++++....+...++| .++|..+.
T Consensus 83 ~GAdevd~vinig-----~~-~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaG--ADfVKTsT 154 (220)
T 1ub3_A 83 RGADEVDMVLHLG-----RA-KAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGG--ADFLKTST 154 (220)
T ss_dssp TTCSEEEEECCHH-----HH-HTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHT--CSEEECCC
T ss_pred cCCCEEEecccch-----hh-hCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC--CCEEEeCC
Confidence 6999887655432 01 135678888878777775222233344433 236888999999999997 77777654
Q ss_pred -eeecCCCCCCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCcccc
Q 016599 272 -LLAVKGTPLQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSI 332 (386)
Q Consensus 272 -f~P~~gT~l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~ 332 (386)
|.| ...+.++...+... .-+..-+.+++|--+ .+.....+.+||+++
T Consensus 155 Gf~~---------~gat~~dv~~m~~~---vg~~v~VkaaGGirt--~~~al~~i~aGa~Ri 202 (220)
T 1ub3_A 155 GFGP---------RGASLEDVALLVRV---AQGRAQVKAAGGIRD--RETALRMLKAGASRL 202 (220)
T ss_dssp SSSS---------CCCCHHHHHHHHHH---HTTSSEEEEESSCCS--HHHHHHHHHTTCSEE
T ss_pred CCCC---------CCCCHHHHHHHHHh---hCCCCeEEEECCCCC--HHHHHHHHHCCCccc
Confidence 432 12344443333322 233444555554322 223344566898865
No 412
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=38.60 E-value=1.8e+02 Score=25.97 Aligned_cols=121 Identities=12% Similarity=0.031 Sum_probs=70.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHHH---HH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIEL---KK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~L---k~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++.. ++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~ 93 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTT----GESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKE 93 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 788899999999999999998875532 332 344555555555543 23666665554 445555444 56
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeec---CCCHHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGLL 254 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~l 254 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-..-+.+. .-+.+.+.++.
T Consensus 94 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 151 (294)
T 2ehh_A 94 VGADGALVVVPYY-------N-KPTQRGLYEHFKTVAQEVDIPIIIYNIPSRTCVEISVDTMFKLA 151 (294)
T ss_dssp TTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHCCSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCcCCCHHHHHHHH
Confidence 6999887632111 1 1255666666666444 4676554333332 34555555554
No 413
>3pao_A Adenosine deaminase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; HET: ADE; 2.49A {Pseudomonas aeruginosa} PDB: 3pan_A* 3ou8_A* 3pbm_A*
Probab=38.54 E-value=1.9e+02 Score=26.37 Aligned_cols=43 Identities=12% Similarity=0.095 Sum_probs=19.6
Q ss_pred HHHHHHHhhcCcEEEEecCCC-CHHHH-HHHHHhccCeeecccCc
Q 016599 162 LEYVKDIRDMGMEVCCTLGML-EKHQA-IELKKAGLTAYNHNLDT 204 (386)
Q Consensus 162 ~~~i~~ik~~g~~i~~t~g~l-~~e~l-~~Lk~aG~~~v~i~le~ 204 (386)
.+.++.+++.|+.+.+..|.. +++.+ +.+...|.+++.+++..
T Consensus 180 ~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rigHgv~l 224 (326)
T 3pao_A 180 QRVFDRARSEGFLTVAHAGEEGPPEYIWEALDLLKVERIDHGVRA 224 (326)
T ss_dssp HHHHHHHHHTTCEECEEESSSSCHHHHHHHHHTTCCSSEEECGGG
T ss_pred HHHHHHHHHcCCceeeecCCCCCHHHHHHHHhcCCCceeeeeeee
Confidence 334444455555554444432 23333 23333566666555443
No 414
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=38.41 E-value=1.3e+02 Score=27.80 Aligned_cols=43 Identities=14% Similarity=0.129 Sum_probs=31.0
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
....+.++.++.+++.|+.+..+. ..++.=-+...+.+...++
T Consensus 272 GGi~~~~~i~~~A~~~g~~~~~~~---~~es~i~~aa~~hlaaa~~ 314 (378)
T 2qdd_A 272 GGLTRARQIRDFGVSVGWQMHIED---VGGTALADTAALHLAASTP 314 (378)
T ss_dssp TSHHHHHHHHHHHHHHTCEEEECC---SSCCHHHHHHHHHHHHTSC
T ss_pred CCHHHHHHHHHHHHHcCCeEEecC---CCCcHHHHHHHHHHHHcCC
Confidence 357888899999999999876663 3466555666677776664
No 415
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=38.38 E-value=23 Score=33.83 Aligned_cols=75 Identities=17% Similarity=0.196 Sum_probs=46.4
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhCC-CCCHHHHHHHHHHHHHcCCe
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKIIT-TRSYDERLETLKHVREAGIN 234 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~-~~s~~~~l~~i~~a~~~Gi~ 234 (386)
.+..+.+.+..++++|+. +.+++-.-.. ...|-+... |..+.+ -.+.++..+.++.||+.||+
T Consensus 21 d~~gi~~~LdyL~~LGv~~I~L~Pi~~~~------~~~GY~~~d---------y~~idp~~Gt~~df~~lv~~aH~~Gi~ 85 (441)
T 1lwj_A 21 DFRGLKNAVSYLKELGIDFVWLMPVFSSI------SFHGYDVVD---------FYSFKAEYGSEREFKEMIEAFHDSGIK 85 (441)
T ss_dssp CHHHHHHTHHHHHHTTCCEEEECCCEECS------SSSCCSCSE---------EEEECTTTCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHhhHHHHHcCCCEEEeCCCcCCC------CCCCCCccc---------ccccCcccCCHHHHHHHHHHHHHCCCE
Confidence 456666777777777776 4444322111 012322221 112333 24788999999999999999
Q ss_pred eeEeEEeec-CCC
Q 016599 235 VCSGGIIGL-GEA 246 (386)
Q Consensus 235 v~~~~i~Gl-get 246 (386)
|-.++++.+ +..
T Consensus 86 VilD~V~NH~~~~ 98 (441)
T 1lwj_A 86 VVLDLPIHHTGFL 98 (441)
T ss_dssp EEEEECTTBCCTT
T ss_pred EEEEeCCCcccCc
Confidence 999999988 543
No 416
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=38.18 E-value=2.2e+02 Score=25.37 Aligned_cols=97 Identities=10% Similarity=0.029 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcCCC
Q 016599 184 KHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPT 262 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~ 262 (386)
...++.+.+.|++.+.+.=-+.+ ...-+.+++.+.++.+.+.--. ..-+|.|. +.+.++..+..+.+.++|
T Consensus 24 ~~lv~~li~~Gv~gl~~~GttGE------~~~Ls~~Er~~v~~~~~~~~~g-r~pviaGvg~~~t~~ai~la~~A~~~G- 95 (292)
T 2vc6_A 24 HDLVEWQIEEGSFGLVPCGTTGE------SPTLSKSEHEQVVEITIKTANG-RVPVIAGAGSNSTAEAIAFVRHAQNAG- 95 (292)
T ss_dssp HHHHHHHHHTTCSEEETTSGGGT------GGGSCHHHHHHHHHHHHHHHTT-SSCBEEECCCSSHHHHHHHHHHHHHTT-
T ss_pred HHHHHHHHHcCCCEEEECccccC------hhhCCHHHHHHHHHHHHHHhCC-CCcEEEecCCccHHHHHHHHHHHHHcC-
Q ss_pred CCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHH
Q 016599 263 HPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 298 (386)
Q Consensus 263 ~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~ 298 (386)
.+.+-+.+ |+...+ +.+++.+.+...
T Consensus 96 -adavlv~~-------P~y~~~--s~~~l~~~f~~i 121 (292)
T 2vc6_A 96 -ADGVLIVS-------PYYNKP--TQEGIYQHFKAI 121 (292)
T ss_dssp -CSEEEEEC-------CCSSCC--CHHHHHHHHHHH
T ss_pred -CCEEEEcC-------CCCCCC--CHHHHHHHHHHH
No 417
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=38.09 E-value=45 Score=32.72 Aligned_cols=77 Identities=9% Similarity=0.015 Sum_probs=46.1
Q ss_pred HHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhC--CC-CCHHHHHHHHHHHHHcCCe
Q 016599 159 NQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKII--TT-RSYDERLETLKHVREAGIN 234 (386)
Q Consensus 159 ~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~--~~-~s~~~~l~~i~~a~~~Gi~ 234 (386)
.-+.+.+..++++|+. |.+++-.-...... +.|-.....+-+ |..+. +. .+.++..+.++.||+.||+
T Consensus 37 ~gi~~~LdyLk~LGvt~IwL~Pi~e~~~~~~---~~~~~~~~~GY~-----~~~id~~p~~Gt~~dfk~Lv~~aH~~GI~ 108 (527)
T 1gcy_A 37 NILRQQAATIAADGFSAIWMPVPWRDFSSWS---DGSKSGGGEGYF-----WHDFNKNGRYGSDAQLRQAASALGGAGVK 108 (527)
T ss_dssp HHHHHHHHHHHHTTCSEEEECCCSCCCCCBC------CCBCCSSTT-----CSSSCSCSSSCCHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHHHHHhcCCCEEEeCCccccccccc---cCCCCCCCCCcc-----cccCCCCCCCCCHHHHHHHHHHHHHCCCE
Confidence 6777778888888876 55554220000000 001111111111 23344 32 4789999999999999999
Q ss_pred eeEeEEeec
Q 016599 235 VCSGGIIGL 243 (386)
Q Consensus 235 v~~~~i~Gl 243 (386)
|-.++++.+
T Consensus 109 VilD~V~NH 117 (527)
T 1gcy_A 109 VLYDVVPNH 117 (527)
T ss_dssp EEEEECCSB
T ss_pred EEEEEeecC
Confidence 999999988
No 418
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=37.97 E-value=86 Score=26.46 Aligned_cols=74 Identities=16% Similarity=0.193 Sum_probs=42.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
.+++++ ..+...|++.+.+... .++...+.....-++.++.+++ .++++...-|. +.+.+..+.++|++.+.+
T Consensus 118 ~t~~~~----~~a~~~gaD~i~~~~~-f~~~~~~g~~~~~~~~l~~~~~~~~~pvia~GGI-~~~nv~~~~~~Ga~gv~v 191 (221)
T 1yad_A 118 HSLEEA----VQAEKEDADYVLFGHV-FETDCKKGLEGRGVSLLSDIKQRISIPVIAIGGM-TPDRLRDVKQAGADGIAV 191 (221)
T ss_dssp CSHHHH----HHHHHTTCSEEEEECC-C----------CHHHHHHHHHHHCCSCEEEESSC-CGGGHHHHHHTTCSEEEE
T ss_pred CCHHHH----HHHHhCCCCEEEECCc-cccCCCCCCCCCCHHHHHHHHHhCCCCEEEECCC-CHHHHHHHHHcCCCEEEE
Confidence 355554 3445678887766431 1110000000112355555553 36777777776 899999999999998887
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
+
T Consensus 192 g 192 (221)
T 1yad_A 192 M 192 (221)
T ss_dssp S
T ss_pred h
Confidence 5
No 419
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=37.85 E-value=1.5e+02 Score=26.72 Aligned_cols=21 Identities=24% Similarity=0.395 Sum_probs=12.4
Q ss_pred HHHHHHHHHHHHHcCCcEEEE
Q 016599 124 KDAVMQAAQKAKEAGSTRFCM 144 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l 144 (386)
.+++++.++.+.+.|...+++
T Consensus 169 ~~~ai~Ra~ay~eAGAd~i~~ 189 (295)
T 1s2w_A 169 LDEALKRAEAYRNAGADAILM 189 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEE
Confidence 456666666666666655554
No 420
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.79 E-value=1.7e+02 Score=26.94 Aligned_cols=121 Identities=12% Similarity=-0.027 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHH---HHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIE---LKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~---Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++. .++
T Consensus 49 ID~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~ 124 (343)
T 2v9d_A 49 LDKPGTAALIDDLIKAGVDGLFFLGSG----GEFSQLGAEERKAIARFAIDHVDRRVPVLIGTGGTNARETIELSQHAQQ 124 (343)
T ss_dssp BCHHHHHHHHHHHHHTTCSCEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECCSSCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 788999999999999999998775532 332 344555555555542 23566555554 44555544 456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEe---ecCCCHHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGLL 254 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~l 254 (386)
+|+|.+.+-.-.+ . ..+.+..++-.+.+.+ .++++-..-+. |..-+.+.+.++.
T Consensus 125 ~Gadavlv~~P~Y-------~-~~s~~~l~~~f~~VA~a~~lPiilYn~P~~tg~~l~~e~~~~La 182 (343)
T 2v9d_A 125 AGADGIVVINPYY-------W-KVSEANLIRYFEQVADSVTLPVMLYNFPALTGQDLTPALVKTLA 182 (343)
T ss_dssp HTCSEEEEECCSS-------S-CCCHHHHHHHHHHHHHTCSSCEEEEECHHHHSSCCCHHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCchhcCcCCCHHHHHHHH
Confidence 7999887632111 1 1255666666666544 36665443332 2234555555443
No 421
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=37.69 E-value=89 Score=30.07 Aligned_cols=116 Identities=11% Similarity=0.121 Sum_probs=67.6
Q ss_pred CCHHHHHHHHHH-HHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCC-CHHHHHHHHHhc-cCee
Q 016599 122 MTKDAVMQAAQK-AKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGML-EKHQAIELKKAG-LTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~-~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l-~~e~l~~Lk~aG-~~~v 198 (386)
+++++.++.++. +.+.++. .+ ..+.. +..++.+..+-+.+. ..++++...-.. +...++.+.+.| ++.+
T Consensus 289 ~t~~eai~~~~~lle~y~i~--~I----EdPl~-~dD~eg~~~L~~~~~-~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i 360 (449)
T 3uj2_A 289 FASEELVAHWKSLCERYPIV--SI----EDGLD-EEDWEGWQYMTRELG-DKIQLVGDDLFVTNTERLNKGIKERCGNSI 360 (449)
T ss_dssp EEHHHHHHHHHHHHHHSCEE--EE----ESCSC-TTCHHHHHHHHHHHT-TTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred cCHHHHHHHHHHHHHhcCce--EE----ECCCC-cchHHHHHHHHHHhC-CCceEECCcceeCCHHHHHHHHHcCCCCEE
Confidence 588999988876 5666532 22 22221 234444444433331 145555433333 477787777665 6777
Q ss_pred ecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHH
Q 016599 199 NHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTL 257 (386)
Q Consensus 199 ~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l 257 (386)
.+.+ .+-...-+.+++++.+.++|+.+-+.-. .|||.+.+...+...
T Consensus 361 ~iKv----------~~iGGiTea~kia~lA~~~Gi~~~v~H~--sgET~d~~iadLaVa 407 (449)
T 3uj2_A 361 LIKL----------NQIGTVSETLEAIKMAHKAGYTAVVSHR--SGETEDTTIADLAVA 407 (449)
T ss_dssp EECH----------HHHCSHHHHHHHHHHHHHTTCEEEEECC--SBCCSCCHHHHHHHH
T ss_pred EECc----------cccCCHHHHHHHHHHHHHcCCeEEEeCC--CCCchHHHHHHHHHH
Confidence 7643 2235688889999999999997332222 278876665554443
No 422
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=37.68 E-value=88 Score=29.00 Aligned_cols=70 Identities=17% Similarity=0.241 Sum_probs=44.5
Q ss_pred HHHHHHcCCcEEEEec---ccC-CCCCC---hhh--HHHHHHHHHHHhh-cCcEEEEecCCCCHHHHHHHHHhccCeeec
Q 016599 131 AQKAKEAGSTRFCMGA---AWR-DTIGR---KTN--FNQILEYVKDIRD-MGMEVCCTLGMLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~---g~~-~~~ge---~~~--~~~l~~~i~~ik~-~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i 200 (386)
++.+.+.|++.|.+.+ |++ .+.-. +.. + ..+++++.+++ .++++....|..+.+.+..+.++|++.|.+
T Consensus 158 a~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~-~~~~~l~~i~~~~~iPViaaGGI~~~~~~~~~l~~GAd~V~v 236 (369)
T 3bw2_A 158 ARAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGI-GLLSLLAQVREAVDIPVVAAGGIMRGGQIAAVLAAGADAAQL 236 (369)
T ss_dssp HHHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCC-CHHHHHHHHHHHCSSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEEeCCCcCCcCCCcccccccccccc-cHHHHHHHHHHhcCceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 3455678999888854 221 11100 000 1 13555666653 467887888877999999998999999887
Q ss_pred c
Q 016599 201 N 201 (386)
Q Consensus 201 ~ 201 (386)
+
T Consensus 237 G 237 (369)
T 3bw2_A 237 G 237 (369)
T ss_dssp S
T ss_pred C
Confidence 5
No 423
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=37.61 E-value=1.2e+02 Score=27.11 Aligned_cols=97 Identities=6% Similarity=0.068 Sum_probs=58.1
Q ss_pred hhhHHHHHHHHHHHhhcCcEEE---EecCC---CCHHHHHHHHHhccC----eeecccCchHHHHhhhCCCCCHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVC---CTLGM---LEKHQAIELKKAGLT----AYNHNLDTSREFYSKIITTRSYDERLET 224 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~---~t~g~---l~~e~l~~Lk~aG~~----~v~i~le~~~~~~~~i~~~~s~~~~l~~ 224 (386)
..+++.+.++++.+-+.|+... -+.|. ++.+.-+++.+.-++ ++.+-+ . ....+.++.++.
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia--------G-vg~~~t~~ai~l 90 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVT--------G-VLVDSIEDAADQ 90 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEE--------E-ECCSSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE--------e-CCCccHHHHHHH
Confidence 3677888888888877777633 33443 565555444433221 222100 0 023478888888
Q ss_pred HHHHHHcCCe-eeEeEEeecC-CCHHHHHHHHHHHhcC
Q 016599 225 LKHVREAGIN-VCSGGIIGLG-EAEEDRVGLLHTLATL 260 (386)
Q Consensus 225 i~~a~~~Gi~-v~~~~i~Glg-et~ed~~~~l~~l~~l 260 (386)
.+.+.++|.. +-+..-+-.. -+.+++.++++.+.+-
T Consensus 91 a~~A~~~Gadavlv~~P~y~~~~s~~~l~~~f~~va~a 128 (294)
T 3b4u_A 91 SAEALNAGARNILLAPPSYFKNVSDDGLFAWFSAVFSK 128 (294)
T ss_dssp HHHHHHTTCSEEEECCCCSSCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCcCCCCCCHHHHHHHHHHHHHh
Confidence 8999999986 3222222224 5889999999887653
No 424
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=37.54 E-value=1.4e+02 Score=27.41 Aligned_cols=30 Identities=7% Similarity=0.070 Sum_probs=26.0
Q ss_pred CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 172 GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 172 g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.+++..+-|..+.+.+.++..+|++.|.++
T Consensus 251 ~ipvia~GGI~~~~d~~k~l~~GAd~V~iG 280 (349)
T 1p0k_A 251 ASTMIASGGLQDALDVAKAIALGASCTGMA 280 (349)
T ss_dssp TSEEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 678888899988888888888999999875
No 425
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=37.48 E-value=2.3e+02 Score=25.58 Aligned_cols=140 Identities=19% Similarity=0.167 Sum_probs=71.6
Q ss_pred HHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCC
Q 016599 184 KHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTH 263 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~ 263 (386)
+...+.++..|.+.+.+.+....+... .+..++..+++.++.+++.++++.+-. +|.|.+.++ ...+.+.|
T Consensus 135 ~~~~~a~~~~~~~a~~i~~n~~~~~~~--~~~~~~~~~~~~i~~vr~~~~Pv~vK~-v~~g~~~e~----a~~~~~~G-- 205 (332)
T 1vcf_A 135 DDLLRLVEMLEADALAFHVNPLQEAVQ--RGDTDFRGLVERLAELLPLPFPVMVKE-VGHGLSREA----ALALRDLP-- 205 (332)
T ss_dssp HHHHHHHHHHTCSEEEEECCHHHHHHT--TSCCCCTTHHHHHHHHCSCSSCEEEEC-SSSCCCHHH----HHHHTTSC--
T ss_pred HHHHHHHhhcCCCceeeccchHHHHhc--CCCccHHHHHHHHHHHHcCCCCEEEEe-cCCCCCHHH----HHHHHHcC--
Confidence 333444455577776666654433332 334455556677777777566655543 355667665 45667776
Q ss_pred CCeEeeeeeeecCCC--------CC--------CCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhc
Q 016599 264 PESVPINALLAVKGT--------PL--------QDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLA 327 (386)
Q Consensus 264 ~~~v~~~~f~P~~gT--------~l--------~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~ 327 (386)
++.+.+..- .|| .- .....++..+. +...+...++.-+-..+| +.- ......++..
T Consensus 206 ~d~I~vs~~---ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~---l~~v~~~~~~ipvia~GG-I~~-~~d~~kal~~ 277 (332)
T 1vcf_A 206 LAAVDVAGA---GGTSWARVEEWVRFGEVRHPELCEIGIPTARA---ILEVREVLPHLPLVASGG-VYT-GTDGAKALAL 277 (332)
T ss_dssp CSEEECCCB---TSCCHHHHHHTC--------CCTTCSCBHHHH---HHHHHHHCSSSCEEEESS-CCS-HHHHHHHHHH
T ss_pred CCEEEeCCC---CCCcchhHHHhhccccchhhhHhhccccHHHH---HHHHHHhcCCCeEEEECC-CCC-HHHHHHHHHh
Confidence 677766431 222 10 01111233332 233333444322222332 222 2334667788
Q ss_pred CccccccCCcccc
Q 016599 328 GANSIFTGEKLLT 340 (386)
Q Consensus 328 Gan~~~~g~~~~t 340 (386)
||+.++.|..++.
T Consensus 278 GAd~V~igr~~l~ 290 (332)
T 1vcf_A 278 GADLLAVARPLLR 290 (332)
T ss_dssp TCSEEEECGGGHH
T ss_pred CCChHhhhHHHHH
Confidence 9999988865553
No 426
>2o9p_A Beta-glucosidase B; family 1 glycoside hydrolase; 2.10A {Paenibacillus polymyxa} PDB: 2o9t_A* 2z1s_A* 2jie_A* 2o9r_A*
Probab=37.47 E-value=46 Score=32.15 Aligned_cols=56 Identities=13% Similarity=0.006 Sum_probs=41.6
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCH---HHHHHHHHHHHHcCCeeeEeEE
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSY---DERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~---~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
.+|.++.|+++|++.+-+++ +-.++... ...-+. +-.-+.|+.+++.||.+-+++.
T Consensus 69 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~-~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~ 127 (454)
T 2o9p_A 69 FKEDVQLMKQLGFLHYRFSV-AWPRIMPA-AGIINEEGLLFYEHLLDEIELAGLIPMLTLY 127 (454)
T ss_dssp HHHHHHHHHTTTCCEEEEEC-CHHHHCSS-TTCCCHHHHHHHHHHHHHHHHHTCEEEEEEE
T ss_pred HHHHHHHHHhcCCceEEecc-cHHhhCCC-CCCcCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 47889999999999999998 33666555 222344 5566788999999999766654
No 427
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=37.44 E-value=45 Score=31.53 Aligned_cols=39 Identities=18% Similarity=0.204 Sum_probs=25.4
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHh
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLA 258 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~ 258 (386)
...+.++.+..+.+.|+.+..+.+ .|+.=-+...+.+..
T Consensus 291 Git~~~~ia~~A~~~gi~~~~~~~---~es~i~~aa~~hlaa 329 (400)
T 3mwc_A 291 GLLEAIKIYKIATDNGIKLWGGTM---PESGLGARFLISLAS 329 (400)
T ss_dssp SHHHHHHHHHHHHHTTCEEEECCS---CCCHHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHcCCEEEecCC---CCCHHHHHHHHHHHc
Confidence 577888889999999998755443 344434444555543
No 428
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=37.41 E-value=1.6e+02 Score=26.56 Aligned_cols=107 Identities=9% Similarity=-0.003 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhhc--CcEEEEecCC-CCHHHHH---HHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM--GMEVCCTLGM-LEKHQAI---ELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~~--g~~i~~t~g~-l~~e~l~---~Lk~a 193 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+. .+++....|. .+.+.++ ..+++
T Consensus 26 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~ 101 (313)
T 3dz1_A 26 IDDVSIDRLTDFYAEVGCEGVTVLGIL----GEAPKLDAAEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDA 101 (313)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESTGG----GTGGGSCHHHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHCCCCEEEeCccC----cChhhCCHHHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHc
Confidence 789999999999999999998875532 332 3345555555554432 4666665554 4455544 44566
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cC--CeeeEeEEe
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AG--INVCSGGII 241 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~G--i~v~~~~i~ 241 (386)
|+|.+.+-. +- + . .+.+..++-.+.+.+ .+ +++-.--+.
T Consensus 102 Gadavlv~~---P~-~----~-~s~~~l~~~f~~va~a~~~~lPiilYn~P 143 (313)
T 3dz1_A 102 GAAGVMIAP---PP-S----L-RTDEQITTYFRQATEAIGDDVPWVLQDYP 143 (313)
T ss_dssp TCSEEEECC---CT-T----C-CSHHHHHHHHHHHHHHHCTTSCEEEEECH
T ss_pred CCCEEEECC---CC-C----C-CCHHHHHHHHHHHHHhCCCCCcEEEEeCc
Confidence 999887621 11 1 1 256666666666554 35 776544443
No 429
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=37.30 E-value=1.4e+02 Score=26.89 Aligned_cols=121 Identities=11% Similarity=0.045 Sum_probs=72.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---c-CcEEEEecCC-CCHHHHHH---HH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---M-GMEVCCTLGM-LEKHQAIE---LK 191 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~-g~~i~~t~g~-l~~e~l~~---Lk 191 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ - .+++....|. .+.+.++. .+
T Consensus 25 iD~~~l~~lv~~li~~Gv~gl~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~ 100 (301)
T 3m5v_A 25 VDEQSYARLIKRQIENGIDAVVPVGTT----GESATLTHEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAK 100 (301)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEECSSTT----TTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHH
Confidence 788999999999999999998775432 332 334555555555442 2 4676666554 45555544 45
Q ss_pred HhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEe---ecCCCHHHHHHHH
Q 016599 192 KAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII---GLGEAEEDRVGLL 254 (386)
Q Consensus 192 ~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~---Glget~ed~~~~l 254 (386)
++|+|.+.+-.-.+ . +.+-+..++-.+.+.+ .++++-..-+. |..-+.+.+.++.
T Consensus 101 ~~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~La 159 (301)
T 3m5v_A 101 EHGADGILSVAPYY-------N-KPTQQGLYEHYKAIAQSVDIPVLLYNVPGRTGCEISTDTIIKLF 159 (301)
T ss_dssp HTTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred HcCCCEEEEcCCCC-------C-CCCHHHHHHHHHHHHHhCCCCEEEEeCchhhCcCCCHHHHHHHH
Confidence 66999887632211 1 1255666666666544 47775543333 3344666655554
No 430
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=37.11 E-value=2.8e+02 Score=26.31 Aligned_cols=200 Identities=10% Similarity=-0.057 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHhh-c-------CcEEEEecCCCC------HHHHHHHHHh--ccCeeecccCch-HHHHhhhCCCCCHHH
Q 016599 158 FNQILEYVKDIRD-M-------GMEVCCTLGMLE------KHQAIELKKA--GLTAYNHNLDTS-REFYSKIITTRSYDE 220 (386)
Q Consensus 158 ~~~l~~~i~~ik~-~-------g~~i~~t~g~l~------~e~l~~Lk~a--G~~~v~i~le~~-~~~~~~i~~~~s~~~ 220 (386)
.+.+++.++..++ . ...+.++.|-.. ++.++.++.. -+|.+.+++-.. ..-+..+.......+
T Consensus 159 ~d~~~~~l~~~~~~~~~~~~~~~~~vgvnIg~nk~t~~~~~Dy~~~a~~l~~~ad~ieiNiScPNt~Gl~~lq~~~~l~~ 238 (415)
T 3i65_A 159 CDKVTENLILFRKRQEEDKLLSKHIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTPGLRDNQEAGKLKN 238 (415)
T ss_dssp HHHHHHHHHHHHHHHTTCGGGTTCEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCCC--------CCHHHHH
T ss_pred HHHHHHHHHHHHhhccccccccCceEEEEeccccCccccHHHHHHHHHHHHhhCCEEEEECCCCCCCCcccccCHHHHHH
Confidence 4566666655432 1 223445544322 3443333332 278888877554 221211211223455
Q ss_pred HHHHHHHHHH------------------cCCe-eeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecC-C---
Q 016599 221 RLETLKHVRE------------------AGIN-VCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVK-G--- 277 (386)
Q Consensus 221 ~l~~i~~a~~------------------~Gi~-v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~-g--- 277 (386)
.+++++.+.+ ..++ +.+-+ ..+.+.+++.++++.+.+.| ++.+.+..-.... +
T Consensus 239 ll~aV~~~~~~~~~~~~~~~~~~~~~~~~~~P~V~VKi--~pd~~~~~i~~iA~~a~~aG--aDgIiv~Ntt~~r~dl~~ 314 (415)
T 3i65_A 239 IILSVKEEIDNLEKNNIMNDEFLWFNTTKKKPLVFVKL--APDLNQEQKKEIADVLLETN--IDGMIISNTTTQINDIKS 314 (415)
T ss_dssp HHHHHHHHHHHHHHHCCSCHHHHCCSSSSSCCEEEEEE--CSCCCHHHHHHHHHHHHHHT--CSEEEECCCBSCCCCCGG
T ss_pred HHHHHHHHHHhhcccccccccccccccCCCCCeEEEEe--cCCCCHHHHHHHHHHHHHcC--CcEEEEeCCCcccccccc
Confidence 5555555432 0233 33322 33667889999999999987 6766654322110 0
Q ss_pred --CCCCCCC-CCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCccccCC----CCChhHHH
Q 016599 278 --TPLQDQK-PVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLTTP----NNDFDADQ 350 (386)
Q Consensus 278 --T~l~~~~-~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t~~----~~~~~~~~ 350 (386)
....... ++.....++++...+..++..+.-+..|-+.- .......+.+||+.++.+..+.... ..=.+++.
T Consensus 315 ~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~GGI~s-~eDa~e~l~aGAd~VqIgra~l~~GP~~~~~i~~~L~ 393 (415)
T 3i65_A 315 FENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIASGGIFS-GLDALEKIEAGASVCQLYSCLVFNGMKSAVQIKRELN 393 (415)
T ss_dssp GTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEECSSCCS-HHHHHHHHHHTEEEEEESHHHHHHGGGHHHHHHHHHH
T ss_pred cccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEECCCCC-HHHHHHHHHcCCCEEEEcHHHHhcCHHHHHHHHHHHH
Confidence 0000000 11123334556655555543222233332322 3334677889999987665332110 01124455
Q ss_pred HHHHHcCCCcCC
Q 016599 351 LMFKVLGLTPKA 362 (386)
Q Consensus 351 ~~i~~~G~~p~~ 362 (386)
+.+++.|+.-+.
T Consensus 394 ~~l~~~G~~si~ 405 (415)
T 3i65_A 394 HLLYQRGYYNLK 405 (415)
T ss_dssp HHHHHTTCSSST
T ss_pred HHHHHcCCCCHH
Confidence 677778886543
No 431
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=37.06 E-value=1.2e+02 Score=27.45 Aligned_cols=120 Identities=12% Similarity=0.024 Sum_probs=69.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|. .||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 40 iD~~~l~~li~~li~~Gv~Gl~v~Gt----TGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~ 115 (315)
T 3si9_A 40 IDEKAFCNFVEWQITQGINGVSPVGT----TGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEK 115 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSST----TTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEeCcc----ccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHh
Confidence 78999999999999999999876542 2332 334555555555543 24565555554 4455544 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEee---cCCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIG---LGEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~G---lget~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . ..+-+..++-.+.+.+ .++++-..-+.+ ..-+.+.+.++
T Consensus 116 ~Gadavlv~~P~y-------~-~~~~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 172 (315)
T 3si9_A 116 AGADAVLVVTPYY-------N-RPNQRGLYTHFSSIAKAISIPIIIYNIPSRSVIDMAVETMRDL 172 (315)
T ss_dssp TTCSEEEEECCCS-------S-CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHcCCCCEEEEeCchhhCCCCCHHHHHHH
Confidence 7999887632111 1 1245666666666544 477755444333 33454544433
No 432
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=37.05 E-value=1.9e+02 Score=26.52 Aligned_cols=97 Identities=11% Similarity=0.107 Sum_probs=58.5
Q ss_pred hhhHHHHHHHHHHHhhcCcE---EEEecCC---CCHHHHHHHHHhccC----eeecccCchHHHHhhhCCCCCHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGME---VCCTLGM---LEKHQAIELKKAGLT----AYNHNLDTSREFYSKIITTRSYDERLET 224 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~---i~~t~g~---l~~e~l~~Lk~aG~~----~v~i~le~~~~~~~~i~~~~s~~~~l~~ 224 (386)
..+++.+.++++.+-+.|+. ++-|+|. ++.+.-+++.+.-++ ++.+=+- ....+.++.++.
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaG---------vg~~st~eai~l 118 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIG---------TGGTNARETIEL 118 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE---------CCSSCHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe---------cCCCCHHHHHHH
Confidence 36778888888887766665 2334443 565555444333221 2222000 023478888899
Q ss_pred HHHHHHcCCeee-EeEEeecCCCHHHHHHHHHHHhcC
Q 016599 225 LKHVREAGINVC-SGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 225 i~~a~~~Gi~v~-~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.+.++|..-- +..-+-..-+.+++.++++.+.+-
T Consensus 119 a~~A~~~Gadavlv~~P~Y~~~s~~~l~~~f~~VA~a 155 (343)
T 2v9d_A 119 SQHAQQAGADGIVVINPYYWKVSEANLIRYFEQVADS 155 (343)
T ss_dssp HHHHHHHTCSEEEEECCSSSCCCHHHHHHHHHHHHHT
T ss_pred HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 999999998632 222222245889999999888764
No 433
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=37.02 E-value=1.1e+02 Score=28.79 Aligned_cols=98 Identities=8% Similarity=-0.002 Sum_probs=54.3
Q ss_pred hHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeeccc----CchHHHHhhhC------------CCCCHHH
Q 016599 157 NFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNL----DTSREFYSKII------------TTRSYDE 220 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l----e~~~~~~~~i~------------~~~s~~~ 220 (386)
..++..++++.+.+.++...=-+-. +.+.+..|++.- .+++.. .+..+..+.+. +-....+
T Consensus 224 ~~~~A~~~~~~l~~~~i~~iEqP~~-d~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~ 300 (398)
T 4dye_A 224 SVPDSVRAGIALEELDLEYLEDPCV-GIEGMAQVKAKV--RIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAA 300 (398)
T ss_dssp CHHHHHHHHHHHGGGCCSEEECCSS-HHHHHHHHHHHC--CSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHH
T ss_pred CHHHHHHHHHHHhhcCCCEEcCCCC-CHHHHHHHHhhC--CCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHH
Confidence 4567777777777776652212211 566677776641 233321 12212222211 1135788
Q ss_pred HHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 221 RLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 221 ~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.++....+.+.|+.+..+.+ +++.-....++.+...+
T Consensus 301 ~~~ia~~A~~~gi~~~~h~~---~e~~i~~aa~l~laaa~ 337 (398)
T 4dye_A 301 TKALAAHCETFGLGMNLHSG---GELGIATAAHLAVVSST 337 (398)
T ss_dssp HHHHHHHHHHHTCEEEECCS---CCCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCCeEEEcCC---cchHHHHHHHHHHHhcC
Confidence 88899999999999877653 34433445566666555
No 434
>1ug6_A Beta-glycosidase; glucosidase, atomic resolution, riken structural genomics/PR initiative, RSGI, structural genomics, hydrolase; 0.99A {Thermus thermophilus} SCOP: c.1.8.4 PDB: 1np2_A
Probab=37.01 E-value=60 Score=31.11 Aligned_cols=57 Identities=9% Similarity=0.017 Sum_probs=41.1
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeEeEE
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s---~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
.++.++.|+++|++.+-+++ +-.++...-...-+ ++-.-+.|+.+++.||.+-+++.
T Consensus 59 ~~eDi~lm~~~G~~~~R~si-~W~Ri~P~g~g~~n~~gl~~y~~~id~l~~~GI~p~vtL~ 118 (431)
T 1ug6_A 59 YEEDIALMQSLGVRAYRFSV-AWPRILPEGRGRINPKGLAFYDRLVDRLLASGITPFLTLY 118 (431)
T ss_dssp HHHHHHHHHHHTCCEEEEEC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred hHHHHHHHHHcCCCEEEccc-CHHHcccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 37889999999999999988 22555443211123 67777889999999998666554
No 435
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=37.01 E-value=1.1e+02 Score=27.77 Aligned_cols=119 Identities=7% Similarity=-0.072 Sum_probs=66.8
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCCCCHHHHHHH---HHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGMLEKHQAIEL---KKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~l~~e~l~~L---k~a 193 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|..+.+.++.. +++
T Consensus 30 iD~~~l~~lv~~li~~Gv~gl~v~GtT----GE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~st~~ai~la~~A~~~ 105 (314)
T 3d0c_A 30 IDWKGLDDNVEFLLQNGIEVIVPNGNT----GEFYALTIEEAKQVATRVTELVNGRATVVAGIGYSVDTAIELGKSAIDS 105 (314)
T ss_dssp BCHHHHHHHHHHHHHTTCSEECTTSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECSSHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHcCCCEEEECccc----CChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCcCHHHHHHHHHHHHHc
Confidence 788999999999999999988764421 332 344555555555442 24666555454445555444 556
Q ss_pred ccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeecCCCHHHHHHH
Q 016599 194 GLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGLGEAEEDRVGL 253 (386)
Q Consensus 194 G~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Glget~ed~~~~ 253 (386)
|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .++++-..-..|. -+.+.+.++
T Consensus 106 Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~tg~-l~~~~~~~L 157 (314)
T 3d0c_A 106 GADCVMIHQPVH-------P-YITDAGAVEYYRNIIEALDAPSIIYFKDAH-LSDDVIKEL 157 (314)
T ss_dssp TCSEEEECCCCC-------S-CCCHHHHHHHHHHHHHHSSSCEEEEECCTT-SCTHHHHHH
T ss_pred CCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhCCCCEEEEeCCCC-cCHHHHHHH
Confidence 999887633211 1 1245666666655444 4666432113344 444444433
No 436
>3n9k_A Glucan 1,3-beta-glucosidase; aromatic entranceway/clamp, exoglucanase, glycoside hydrolas protein-carbohydrate interaction; HET: BGC; 1.70A {Candida albicans} SCOP: c.1.8.3 PDB: 2pc8_A* 2pb1_A* 2pbo_A 3o6a_A 2pf0_A 1cz1_A 1eqc_A* 1eqp_A
Probab=36.94 E-value=1.4e+02 Score=28.17 Aligned_cols=56 Identities=11% Similarity=-0.012 Sum_probs=39.1
Q ss_pred CCHHHHHHHHHhccCeeecccCc--h-HHHHhhhCC--CCCHHHHHHHHHHHHHcCCeeeEeEE
Q 016599 182 LEKHQAIELKKAGLTAYNHNLDT--S-REFYSKIIT--TRSYDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 182 l~~e~l~~Lk~aG~~~v~i~le~--~-~~~~~~i~~--~~s~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
++++.++.|+++|++.|-+.+.- + +. + -.+ ...++..-++|+.|.+.||.|-+++-
T Consensus 74 ite~D~~~ik~~G~N~VRipi~~~~~~~~--~-~~py~~~~~~~ld~vV~~a~~~Gl~VILDlH 134 (399)
T 3n9k_A 74 ITEQDFKQISNLGLNFVRIPIGYWAFQLL--D-NDPYVQGQVQYLEKALGWARKNNIRVWIDLH 134 (399)
T ss_dssp SCHHHHHHHHHTTCCEEEEEEEGGGTCCC--T-TCCCCCCHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CcHHHHHHHHHcCCCEEEEcccHHHccCC--C-CCccchhHHHHHHHHHHHHHHCCCEEEEEec
Confidence 57899999999999988775532 1 10 0 001 12477777889999999999766653
No 437
>1xg4_A Probable methylisocitrate lyase; 2-methylisocitrate lyase/inhibitor complex, isocitrate lyase superfamily; HET: ICT; 1.60A {Escherichia coli} PDB: 1xg3_A* 1mum_A 1oqf_A 1ujq_A 1o5q_A
Probab=36.84 E-value=98 Score=27.94 Aligned_cols=89 Identities=18% Similarity=0.197 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecC---CCCHHHHHHHHHhccCeeec
Q 016599 124 KDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLG---MLEKHQAIELKKAGLTAYNH 200 (386)
Q Consensus 124 ~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g---~l~~e~l~~Lk~aG~~~v~i 200 (386)
.+++++.++.+.+.|...+++-+ ....+.+.++.+.++ +++..|.- ....-..++|.+.|++++.+
T Consensus 166 l~~ai~ra~ay~eAGAd~i~~e~--------~~~~~~~~~i~~~~~---iP~~~N~~~~g~~p~~~~~eL~~~G~~~v~~ 234 (295)
T 1xg4_A 166 LDAAIERAQAYVEAGAEMLFPEA--------ITELAMYRQFADAVQ---VPILANITEFGATPLFTTDELRSAHVAMALY 234 (295)
T ss_dssp HHHHHHHHHHHHHTTCSEEEETT--------CCSHHHHHHHHHHHC---SCBEEECCSSSSSCCCCHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEeC--------CCCHHHHHHHHHHcC---CCEEEEecccCCCCCCCHHHHHHcCCCEEEE
Q ss_pred ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcC
Q 016599 201 NLDTSREFYSKIITTRSYDERLETLKHVREAG 232 (386)
Q Consensus 201 ~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~G 232 (386)
+.-.+...+..+. ++.+.+++.|
T Consensus 235 ~~~~~~aa~~a~~---------~~~~~i~~~g 257 (295)
T 1xg4_A 235 PLSAFRAMNRAAE---------HVYNVLRQEG 257 (295)
T ss_dssp SSHHHHHHHHHHH---------HHHHHHHHHS
T ss_pred ChHHHHHHHHHHH---------HHHHHHHHhC
No 438
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=36.84 E-value=2.1e+02 Score=24.82 Aligned_cols=70 Identities=13% Similarity=0.069 Sum_probs=50.5
Q ss_pred CCHHHHHHHHHHHHH-cCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCee
Q 016599 122 MTKDAVMQAAQKAKE-AGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~-~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
.+++++.+.+..+.+ +|..-|++.+.+. .| -.++++++++. ..++.+--|..+++.++.+.+ |.|.+
T Consensus 142 ~~~e~iaa~A~~a~~~~g~~~vY~e~sG~--~g-------~~~~v~~ir~~~~~~pv~vGfGI~~~e~a~~~~~-gAD~V 211 (235)
T 3w01_A 142 LTTEDLEAYAQMVNHMYRLPVMYIEYSGI--YG-------DVSKVQAVSEHLTETQLFYGGGISSEQQATEMAA-IADTI 211 (235)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEECTTS--CC-------CHHHHHHHHTTCSSSEEEEESCCCSHHHHHHHHT-TSSEE
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEecCCC--cC-------CHHHHHHHHHhcCCCCEEEECCcCCHHHHHHHHc-CCCEE
Confidence 368888888774444 5777777755321 22 15666677753 567888899999999999987 99999
Q ss_pred ecc
Q 016599 199 NHN 201 (386)
Q Consensus 199 ~i~ 201 (386)
-++
T Consensus 212 VVG 214 (235)
T 3w01_A 212 IVG 214 (235)
T ss_dssp EEC
T ss_pred EEC
Confidence 875
No 439
>1twd_A Copper homeostasis protein CUTC; TIM-like protein, structural genomics, PSI, protein structure initiative; 1.70A {Shigella flexneri} SCOP: c.1.30.1 PDB: 1x7i_A 1x8c_A
Probab=36.84 E-value=75 Score=28.08 Aligned_cols=67 Identities=12% Similarity=0.181 Sum_probs=40.7
Q ss_pred HHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 130 AAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 130 ~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
.++.+.++|+++|. ++|+.++. ....+.|.++++... .+++..-.| ++.+.+..|.+.|++.+..+-
T Consensus 133 ale~L~~lG~~rIL-TSG~~~~a--~~g~~~L~~Lv~~a~--~i~Im~GgG-v~~~Ni~~l~~tGv~e~H~Sa 199 (256)
T 1twd_A 133 TLNNLAELGIARVL-TSGQKSDA--LQGLSKIMELIAHRD--APIIMAGAG-VRAENLHHFLDAGVLEVHSSA 199 (256)
T ss_dssp HHHHHHHHTCCEEE-ECTTSSST--TTTHHHHHHHHTSSS--CCEEEEESS-CCTTTHHHHHHHTCSEEEECC
T ss_pred HHHHHHHcCCCEEE-CCCCCCCH--HHHHHHHHHHHHhhC--CcEEEecCC-cCHHHHHHHHHcCCCeEeECC
Confidence 35566677999885 44433322 235566666665433 566655555 455566666688999988763
No 440
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=36.77 E-value=1.4e+02 Score=27.15 Aligned_cols=99 Identities=12% Similarity=0.038 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCHHHHHHHHHHHhcCCC
Q 016599 184 KHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL-GEAEEDRVGLLHTLATLPT 262 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ed~~~~l~~l~~l~~ 262 (386)
.+.++.+.+.|++.+.+.=-+.+ ...-+.+++.+.++.+.+.- .-.+-+|.|. ..+.++..++.+.++++|
T Consensus 35 ~~lv~~li~~Gv~gl~v~GtTGE------~~~Ls~~Er~~v~~~~~~~~-~grvpviaGvg~~~t~~ai~la~~a~~~G- 106 (318)
T 3qfe_A 35 ERYYAYLARSGLTGLVILGTNAE------AFLLTREERAQLIATARKAV-GPDFPIMAGVGAHSTRQVLEHINDASVAG- 106 (318)
T ss_dssp HHHHHHHHTTTCSEEEESSGGGT------GGGSCHHHHHHHHHHHHHHH-CTTSCEEEECCCSSHHHHHHHHHHHHHHT-
T ss_pred HHHHHHHHHcCCCEEEeCccccC------hhhCCHHHHHHHHHHHHHHh-CCCCcEEEeCCCCCHHHHHHHHHHHHHcC-
Q ss_pred CCCeEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHH
Q 016599 263 HPESVPINALLAVKGTPLQDQKPVEIWEMIRMIATA 298 (386)
Q Consensus 263 ~~~~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~ 298 (386)
.+.+-+.+ |+....+.+.+++.+.+...
T Consensus 107 -adavlv~~-------P~y~~kp~~~~~l~~~f~~i 134 (318)
T 3qfe_A 107 -ANYVLVLP-------PAYFGKATTPPVIKSFFDDV 134 (318)
T ss_dssp -CSEEEECC-------CCC---CCCHHHHHHHHHHH
T ss_pred -CCEEEEeC-------CcccCCCCCHHHHHHHHHHH
No 441
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=36.75 E-value=72 Score=23.08 Aligned_cols=64 Identities=11% Similarity=0.190 Sum_probs=40.7
Q ss_pred hHHHHHHHHhhcCCCCCCCHHHHHHhcCCChHHHHHHHHHHHHhhcCCCeeEEEEeeeecCCCCC-cCCCCCCCC
Q 016599 36 AAAIEAERTIREGPRHDWSKDDIKSIYDSPVLDLLFHGAQVHRHAHNFREVQQCTLLSIKTGGCS-EDCSYCPQS 109 (386)
Q Consensus 36 ~~~~~~~~~~~~~~~~~ls~ee~~~l~~~~~~~~l~~aa~~~r~~~~g~~v~~~~~i~i~t~~C~-~~C~fC~~~ 109 (386)
.+.+|++.+.. ....+..|+...|+.+..-.-.-.....++.+ -.... .. ..+|. -.|..|+-.
T Consensus 3 ~L~~Il~~L~~---~g~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~---l~R~~---~~-~~~C~sgsC~sC~~~ 67 (87)
T 2k02_A 3 SLMEVRDMLAL---QGRMEAKQLSARLQTPQPLIDAMLERMEAMGK---VVRIS---ET-SEGCLSGSCKSCPEG 67 (87)
T ss_dssp CTHHHHHHHHH---SCSEEHHHHHHHTTCCHHHHHHHHHHHHTTCC---SEEEE---EE-CCSSCSSSSSSCSSC
T ss_pred hHHHHHHHHHH---cCCCcHHHHHHHHCcCHHHHHHHHHHHHHCCC---EEEEe---cC-CCCCCCCCCCCCCCc
Confidence 46788898888 78899999999998654433333333333322 11111 12 56886 789999765
No 442
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=36.66 E-value=49 Score=28.98 Aligned_cols=74 Identities=16% Similarity=0.156 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc---CcEEEEecCCCCHHHHHHHHHhccCee
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM---GMEVCCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~---g~~i~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
.+++|+. .+.+.|++.+.++.. .++...+.....=++.++.+++. .+++..--|. +.+.+..+.++|++.+
T Consensus 143 ht~~Ea~----~A~~~GaDyI~vgpv-f~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gv 216 (243)
T 3o63_A 143 HDPDQVA----AAAAGDADYFCVGPC-WPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRI 216 (243)
T ss_dssp CSHHHHH----HHHHSSCSEEEECCS-SCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCE
T ss_pred CCHHHHH----HHhhCCCCEEEEcCc-cCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEE
Confidence 4666644 344578887766432 22222111111123445555543 5666555565 8899999999999998
Q ss_pred ecc
Q 016599 199 NHN 201 (386)
Q Consensus 199 ~i~ 201 (386)
.++
T Consensus 217 av~ 219 (243)
T 3o63_A 217 VVV 219 (243)
T ss_dssp EES
T ss_pred EEe
Confidence 863
No 443
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=36.64 E-value=2.1e+02 Score=25.64 Aligned_cols=97 Identities=7% Similarity=-0.035 Sum_probs=57.2
Q ss_pred hhhHHHHHHHHHHHhhcCcEEE---EecCC---CCHHHHHHHHHhccC----eeecccCchHHHHhhhCCCCCHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVC---CTLGM---LEKHQAIELKKAGLT----AYNHNLDTSREFYSKIITTRSYDERLET 224 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~---~t~g~---l~~e~l~~Lk~aG~~----~v~i~le~~~~~~~~i~~~~s~~~~l~~ 224 (386)
..+++.+.++++.+-+.|+... -|.|. ++.+.-+++.+.-++ ++.+=+- ....+.++.++.
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaG---------vg~~~t~~ai~l 98 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAH---------VGCVSTAESQQL 98 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEE---------CCCSSHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe---------cCCCCHHHHHHH
Confidence 3677888888888877776632 33442 565554444333121 2222100 023467888888
Q ss_pred HHHHHHcCCeee-EeEEeecCCCHHHHHHHHHHHhcC
Q 016599 225 LKHVREAGINVC-SGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 225 i~~a~~~Gi~v~-~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.+.++|..-- +...+-..-+.+++.++++.+.+-
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 135 (303)
T 2wkj_A 99 AASAKRYGFDAVSAVTPFYYPFSFEEHCDHYRAIIDS 135 (303)
T ss_dssp HHHHHHHTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEecCCCCCCCCHHHHHHHHHHHHHh
Confidence 899999998632 222222245889999998887653
No 444
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=36.60 E-value=1.4e+02 Score=28.28 Aligned_cols=75 Identities=15% Similarity=0.155 Sum_probs=47.6
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecc-cCC--C-----CCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAA-WRD--T-----IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g-~~~--~-----~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
.+.+++ +.+.+.|++.|.+..+ +.. + .+.| .+..+.++.+.+++.++++...-|..+.+.+.++..+
T Consensus 193 ~t~e~A----~~a~~aGAD~I~vG~g~Gs~~~tr~~~g~g~p-~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalal 267 (400)
T 3ffs_A 193 VTEEAT----KELIENGADGIKVGIGPGSICTTRIVAGVGVP-QITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAV 267 (400)
T ss_dssp CSHHHH----HHHHHTTCSEEEECC---------CCSCBCCC-HHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTT
T ss_pred CCHHHH----HHHHHcCCCEEEEeCCCCcCcccccccccchh-HHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHc
Confidence 455544 4556679988877311 100 0 1112 3444555555555568888888899888888888899
Q ss_pred ccCeeecc
Q 016599 194 GLTAYNHN 201 (386)
Q Consensus 194 G~~~v~i~ 201 (386)
|.+.+.++
T Consensus 268 GAd~V~vG 275 (400)
T 3ffs_A 268 GASSVMIG 275 (400)
T ss_dssp TCSEEEEC
T ss_pred CCCEEEEC
Confidence 99998864
No 445
>3o1n_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, lyase; 1.03A {Salmonella enterica subsp} PDB: 3s42_A 3l2i_A* 3lb0_A 4guf_A 4gug_A* 4guh_A* 3nnt_A* 4guj_A* 3m7w_A 3oex_A 4gfs_A* 4gui_A* 1gqn_A 1l9w_A* 1qfe_A*
Probab=36.56 E-value=2.3e+02 Score=25.15 Aligned_cols=149 Identities=18% Similarity=0.154 Sum_probs=88.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEec------CC--CCH-HHHHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTL------GM--LEK-HQAIEL 190 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~------g~--l~~-e~l~~L 190 (386)
.+.+++.+.++.+...|++-|-+--.. ..++...+.+.+.++.+++. ++++..|. |. .++ +.++.+
T Consensus 49 ~~~~e~~~~~~~~~~~gaD~VElRvD~---l~~~~~~~~v~~~l~~lr~~~~~~PiI~T~Rt~~eGG~~~~~~~~~~~ll 125 (276)
T 3o1n_A 49 KTITDVKSEALAYREADFDILEWRVDH---FANVTTAESVLEAAGAIREIITDKPLLFTFRSAKEGGEQALTTGQYIDLN 125 (276)
T ss_dssp SSHHHHHHHHHHHTTSCCSEEEEEGGG---CTTTTCHHHHHHHHHHHHHHCCSSCEEEECCBGGGTCSBCCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHhhCCCCEEEEEecc---ccccCcHHHHHHHHHHHHHhcCCCCEEEEEEEhhhCCCCCCCHHHHHHHH
Confidence 478999999988887888877663321 11223446788888888753 56765552 32 233 334444
Q ss_pred H---Hhc-cCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCee-eEeEEeecCCCHHHHHHHHHHHhcCCCCCC
Q 016599 191 K---KAG-LTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINV-CSGGIIGLGEAEEDRVGLLHTLATLPTHPE 265 (386)
Q Consensus 191 k---~aG-~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v-~~~~i~Glget~ed~~~~l~~l~~l~~~~~ 265 (386)
+ +.| ++.|-+-+...+ +.+-+.++.+++.|.++ .+.--+.---+.+++...++.+.++| ++
T Consensus 126 ~~~l~~g~~dyIDvEl~~~~------------~~~~~l~~~a~~~~~kvI~S~Hdf~~tP~~~el~~~~~~~~~~G--aD 191 (276)
T 3o1n_A 126 RAAVDSGLVDMIDLELFTGD------------DEVKATVGYAHQHNVAVIMSNHDFHKTPAAEEIVQRLRKMQELG--AD 191 (276)
T ss_dssp HHHHHHTCCSEEEEEGGGCH------------HHHHHHHHHHHHTTCEEEEEEEESSCCCCHHHHHHHHHHHHHTT--CS
T ss_pred HHHHhcCCCCEEEEECcCCH------------HHHHHHHHHHHhCCCEEEEEeecCCCCcCHHHHHHHHHHHHHcC--CC
Confidence 3 447 777776553322 22234456678888874 33222222224688999999999997 66
Q ss_pred eEeeeeeeecCCCCCCCCCCCCHHHHHHHHHHHH
Q 016599 266 SVPINALLAVKGTPLQDQKPVEIWEMIRMIATAR 299 (386)
Q Consensus 266 ~v~~~~f~P~~gT~l~~~~~~s~~e~~~~~a~~R 299 (386)
.+.+-.. + -+.++.+++.....
T Consensus 192 IvKia~~---a---------~s~~Dvl~Ll~~~~ 213 (276)
T 3o1n_A 192 IPKIAVM---P---------QTKADVLTLLTATV 213 (276)
T ss_dssp EEEEEEC---C---------SSHHHHHHHHHHHH
T ss_pred EEEEEec---C---------CChHHHHHHHHHHH
Confidence 6655431 1 24566666665543
No 446
>3ahy_A Beta-glucosidase; cellulases, glycosyl hydrolase, manganese enhancement, hydro; 1.63A {Trichoderma reesei}
Probab=36.41 E-value=61 Score=31.48 Aligned_cols=58 Identities=14% Similarity=0.131 Sum_probs=43.0
Q ss_pred CCHHHHHHHHHhccCeeecccCchHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeEeEE
Q 016599 182 LEKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 182 l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~--~~~s---~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
.-+|.++.|+++|++.+.+++ +-.++...=. ..-+ ++-.-+.|+.+++.||.+-+++.
T Consensus 63 ~y~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~ 125 (473)
T 3ahy_A 63 RTAEDIALLKSLGAKSYRFSI-SWSRIIPEGGRGDAVNQAGIDHYVKFVDDLLDAGITPFITLF 125 (473)
T ss_dssp CHHHHHHHHHHHTCSEEEEEC-CHHHHSSSCSTTSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHHhCCCeEEccc-cHHhhcCCCCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 458889999999999999998 4355554321 1224 67777889999999999666654
No 447
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=36.37 E-value=1.5e+02 Score=27.64 Aligned_cols=84 Identities=19% Similarity=0.158 Sum_probs=47.1
Q ss_pred cCCCCHHHHH-H-------HHHHHH-HcCCcEEEEeccc----------------CCCCCC-h-h-hHHHHHHHHHHHhh
Q 016599 119 QKLMTKDAVM-Q-------AAQKAK-EAGSTRFCMGAAW----------------RDTIGR-K-T-NFNQILEYVKDIRD 170 (386)
Q Consensus 119 ~~~~s~eeI~-~-------~~~~~~-~~G~~~v~l~~g~----------------~~~~ge-~-~-~~~~l~~~i~~ik~ 170 (386)
.+.|+.+||. + .++.+. +.|++.|-|-++. .+.+|. . . ....++++++++++
T Consensus 160 pr~lt~~eI~~~~i~~f~~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~ 239 (379)
T 3aty_A 160 PEELTDDEVRDGIIPLFVEGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCD 239 (379)
T ss_dssp CEECCHHHHHHTHHHHHHHHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHH
T ss_pred CccCCHHHHhHHHHHHHHHHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHH
Confidence 3458999998 4 444556 7899998875442 122232 2 1 23457777777774
Q ss_pred -cCc-EEEE--ec-C-------CC----CHHHHHHHHHhccCeeeccc
Q 016599 171 -MGM-EVCC--TL-G-------ML----EKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 171 -~g~-~i~~--t~-g-------~l----~~e~l~~Lk~aG~~~v~i~l 202 (386)
.|- .+.+ +. + -. ..+.++.|.++|++.+.++.
T Consensus 240 avg~~~v~vRis~~~~~~~~~~~~~~~~~~~la~~l~~~Gvd~i~v~~ 287 (379)
T 3aty_A 240 AVGSDRVGLRISPLNGVHGMIDSNPEALTKHLCKKIEPLSLAYLHYLR 287 (379)
T ss_dssp HHCGGGEEEEECTTCCGGGCCCSCHHHHHHHHHHHHGGGCCSEEEEEC
T ss_pred hcCCCeEEEEECcccccccCCCCCCHHHHHHHHHHHHHhCCCEEEEcC
Confidence 332 1322 22 1 01 13445666677888887754
No 448
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=36.30 E-value=1.5e+02 Score=26.68 Aligned_cols=120 Identities=19% Similarity=0.160 Sum_probs=68.9
Q ss_pred CHHHHHHHHHHHHHc----CCcEEEEecccC-C-CCC---ChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHH
Q 016599 123 TKDAVMQAAQKAKEA----GSTRFCMGAAWR-D-TIG---RKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKK 192 (386)
Q Consensus 123 s~eeI~~~~~~~~~~----G~~~v~l~~g~~-~-~~g---e~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~ 192 (386)
+.|.+++.++.+++. ++..++-.+-+. | |.. .-...+.=++++++++ +.|+.+.++. ++.+.++.+.+
T Consensus 53 s~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~Glg~~~GL~~L~~~~~e~GLpv~Tev--~D~~~v~~l~~ 130 (298)
T 3fs2_A 53 TRDHAFEMAGRLKEMTDKLGIGLVYKSSFDKANRTSLKAARGIGLEKALEVFSDLKKEYGFPVLTDI--HTEEQCAAVAP 130 (298)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEECBCCCCC---------CCHHHHHHHHHHHHHHHCCCEEEEC--CSHHHHHHHTT
T ss_pred CHHHHHHHHHHHHHHHHHcCCcEEEEcccccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEe--CCHHHHHHHHh
Confidence 577888887777654 443333222111 0 100 0012344555566655 6799887664 68999999988
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
. +|.+.|+--.. .+++ .++.+.+.|.+|.. =-|..-|.+|+...++.+.+-|
T Consensus 131 ~-vd~lkIgA~~~----------~n~~----LLr~va~~gkPVil--K~Gms~t~~ei~~ave~i~~~G 182 (298)
T 3fs2_A 131 V-VDVLQIPAFLC----------RQTD----LLIAAARTGRVVNV--KKGQFLAPWDMKNVLAKITESG 182 (298)
T ss_dssp T-CSEEEECGGGT----------TCHH----HHHHHHHTTSEEEE--ECCTTCCGGGHHHHHHHHHTTT
T ss_pred h-CCEEEECcccc----------CCHH----HHHHHHccCCcEEE--eCCCCCCHHHHHHHHHHHHHcC
Confidence 7 99988854211 1222 33445556665322 1122247889999999998876
No 449
>1u83_A Phosphosulfolactate synthase; structural genomics, phosphosulfolactate PSI, protein structure initiative, midwest center for struc genomics; 2.20A {Bacillus subtilis} SCOP: c.1.27.1
Probab=36.27 E-value=1.5e+02 Score=26.42 Aligned_cols=98 Identities=17% Similarity=0.160 Sum_probs=55.8
Q ss_pred HHHHHHHHHHcCCcEEEEecccCCCCCChhh-HHHHHHHHHHHhhcCcE-EEEecCC--CCHHHHHHHHHhccCeeec--
Q 016599 127 VMQAAQKAKEAGSTRFCMGAAWRDTIGRKTN-FNQILEYVKDIRDMGME-VCCTLGM--LEKHQAIELKKAGLTAYNH-- 200 (386)
Q Consensus 127 I~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~-~~~l~~~i~~ik~~g~~-i~~t~g~--l~~e~l~~Lk~aG~~~v~i-- 200 (386)
+.+.++.+.+.|+. ++.+|.+ -|-.. ...+-+.++.+++.|+. +.++.|. ++.+...++.+.-.+.+.+
T Consensus 82 l~ekI~l~~~~gV~-v~~GGTl----fE~~l~qg~~~~yl~~~k~lGF~~IEISdGti~l~~~~~~~lI~~a~~~f~Vl~ 156 (276)
T 1u83_A 82 LEEKISTLKEHDIT-FFFGGTL----FEKYVSQKKVNEFHRYCTYFGCEYIEISNGTLPMTNKEKAAYIADFSDEFLVLS 156 (276)
T ss_dssp HHHHHHHHHHTTCE-EEECHHH----HHHHHHTTCHHHHHHHHHHTTCSEEEECCSSSCCCHHHHHHHHHHHTTTSEEEE
T ss_pred HHHHHHHHHHcCCe-EeCCcHH----HHHHHHcCcHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHhhcEEee
Confidence 66667777788873 4443311 11111 13466777888888988 6888887 4555544443321222332
Q ss_pred --ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCe
Q 016599 201 --NLDTSREFYSKIITTRSYDERLETLKHVREAGIN 234 (386)
Q Consensus 201 --~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~ 234 (386)
+.+..+. ....+.+++++.++..-++|-.
T Consensus 157 EvG~K~~~~-----~~~~~~~~~I~~~~~dLeAGA~ 187 (276)
T 1u83_A 157 EVGSKDAEL-----ASRQSSEEWLEYIVEDMEAGAE 187 (276)
T ss_dssp ECSCCC-----------CCSTHHHHHHHHHHHHTEE
T ss_pred eccccCccc-----cCCCCHHHHHHHHHHHHHCCCc
Confidence 2222210 1234778999999999999965
No 450
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=36.15 E-value=2e+02 Score=26.71 Aligned_cols=98 Identities=12% Similarity=0.127 Sum_probs=59.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHHHH---HH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAIEL---KK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~~L---k~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++.. ++
T Consensus 77 ID~~al~~lv~~li~~Gv~Gl~v~GTT----GE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg~~st~eai~la~~A~~ 152 (360)
T 4dpp_A 77 FDLEAYDDLVNIQIQNGAEGVIVGGTT----GEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTGSNSTREAIHATEQGFA 152 (360)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSTT----TTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEecccc----cChhhCCHHHHHHHHHHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHH
Confidence 788999999999999999998875532 332 334555555555442 24666665554 455555444 45
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHc
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREA 231 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~ 231 (386)
+|+|.+.+-.-- | . ..+.+..++-.+.+.++
T Consensus 153 ~Gadavlvv~Py----Y---~-k~sq~gl~~hf~~IA~a 183 (360)
T 4dpp_A 153 VGMHAALHINPY----Y---G-KTSIEGLIAHFQSVLHM 183 (360)
T ss_dssp TTCSEEEEECCC----S---S-CCCHHHHHHHHHTTGGG
T ss_pred cCCCEEEEcCCC----C---C-CCCHHHHHHHHHHHHHh
Confidence 688887753211 1 1 12556666666665555
No 451
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=36.13 E-value=41 Score=31.92 Aligned_cols=58 Identities=10% Similarity=0.020 Sum_probs=39.9
Q ss_pred HHHHHHHHHhccCeeecccCchHHHHhh--hCC-CCCHHHHHHHHHHHHHcCCeeeEeEEe
Q 016599 184 KHQAIELKKAGLTAYNHNLDTSREFYSK--IIT-TRSYDERLETLKHVREAGINVCSGGII 241 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~le~~~~~~~~--i~~-~~s~~~~l~~i~~a~~~Gi~v~~~~i~ 241 (386)
.+.++.|+++|++.|-+.+=.-+..-.. ..+ ..+.+..++.++.++++|++|-.++-+
T Consensus 51 ~d~~~ilk~~G~N~VRlrvwv~p~~~~g~~y~~g~~d~~~~~~~a~~Ak~~GLkVlldfHy 111 (399)
T 1ur4_A 51 QDIFKTLKEAGVNYVRVRIWNDPYDANGNGYGGGNNDLEKAIQIGKRATANGMKLLADFHY 111 (399)
T ss_dssp CCHHHHHHHTTCCEEEEEECSCCBCTTCCBCSTTCCCHHHHHHHHHHHHHTTCEEEEEECS
T ss_pred chHHHHHHHCCCCEEEEeeecCCcccccCccCCCCCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 5679999999999988643110100000 011 147899999999999999998888765
No 452
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=36.11 E-value=38 Score=31.78 Aligned_cols=24 Identities=8% Similarity=-0.035 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHhhcCcE-EEEecC
Q 016599 157 NFNQILEYVKDIRDMGME-VCCTLG 180 (386)
Q Consensus 157 ~~~~l~~~i~~ik~~g~~-i~~t~g 180 (386)
..+...++++.+.+.|+. +.++.+
T Consensus 254 ~~~~~~~la~~le~~Gvd~i~v~~~ 278 (376)
T 1icp_A 254 PTALGLYMVESLNKYDLAYCHVVEP 278 (376)
T ss_dssp HHHHHHHHHHHHGGGCCSEEEEECC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCC
Confidence 455677777777777765 444444
No 453
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=36.09 E-value=2.1e+02 Score=28.17 Aligned_cols=128 Identities=15% Similarity=0.089 Sum_probs=70.0
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCC
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPT 262 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~ 262 (386)
+.+.++.|.++|+|.+.+..-. ++ -+..++.++.+++.-- ...+|.|---|.+...++++. |
T Consensus 282 ~~eR~~aLv~AGvD~iviD~ah----------Gh-s~~v~~~i~~ik~~~p--~~~viaGNVaT~e~a~~Li~a----G- 343 (556)
T 4af0_A 282 DKDRLKLLAEAGLDVVVLDSSQ----------GN-SVYQIEFIKWIKQTYP--KIDVIAGNVVTREQAAQLIAA----G- 343 (556)
T ss_dssp HHHHHHHHHHTTCCEEEECCSC----------CC-SHHHHHHHHHHHHHCT--TSEEEEEEECSHHHHHHHHHH----T-
T ss_pred HHHHHHHHHhcCCcEEEEeccc----------cc-cHHHHHHHHHHHhhCC--cceEEeccccCHHHHHHHHHc----C-
Confidence 5788999999999998874321 22 3456788888887632 234566655577776666553 3
Q ss_pred CCCeEeeeeeeecCCC----CC-CCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCC
Q 016599 263 HPESVPINALLAVKGT----PL-QDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGE 336 (386)
Q Consensus 263 ~~~~v~~~~f~P~~gT----~l-~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~ 336 (386)
.+.+.+.. -||+ +. .....|..-.+.+....++.+- ..-|.-|-+....+. ..+|.+||+.+|.|.
T Consensus 344 -AD~vkVGi---GpGSiCtTr~v~GvG~PQ~tAi~~~a~~a~~~~---vpvIADGGI~~sGDi-~KAlaaGAd~VMlGs 414 (556)
T 4af0_A 344 -ADGLRIGM---GSGSICITQEVMAVGRPQGTAVYAVAEFASRFG---IPCIADGGIGNIGHI-AKALALGASAVMMGG 414 (556)
T ss_dssp -CSEEEECS---SCSTTBCCTTTCCSCCCHHHHHHHHHHHHGGGT---CCEEEESCCCSHHHH-HHHHHTTCSEEEEST
T ss_pred -CCEEeecC---CCCcccccccccCCCCcHHHHHHHHHHHHHHcC---CCEEecCCcCcchHH-HHHhhcCCCEEEEch
Confidence 44444322 2232 21 1112222233333333333321 112333334444454 789999999997664
No 454
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=36.08 E-value=1.4e+02 Score=26.83 Aligned_cols=97 Identities=15% Similarity=0.093 Sum_probs=58.5
Q ss_pred hhhHHHHHHHHHHHhhcCcEEEE---ecC---CCCHHHHHHHHHhcc----CeeecccCchHHHHhhhCCCCCHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVCC---TLG---MLEKHQAIELKKAGL----TAYNHNLDTSREFYSKIITTRSYDERLET 224 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~~---t~g---~l~~e~l~~Lk~aG~----~~v~i~le~~~~~~~~i~~~~s~~~~l~~ 224 (386)
..+++.+.++++.+-+.|+...+ +.| .++.+.-+++.+.-+ .++.+=+- ....+.++.++.
T Consensus 33 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaG---------vg~~st~~ai~l 103 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAG---------VGTNNTRTSVEL 103 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEE---------CCCSCHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEec---------CCCCCHHHHHHH
Confidence 36788888998888777776332 344 256555444433322 12222000 023478888999
Q ss_pred HHHHHHcCCe-eeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 225 LKHVREAGIN-VCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 225 i~~a~~~Gi~-v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.+.++|.. +-+...+-..-+.+++.++++.+.+-
T Consensus 104 a~~A~~~Gadavlv~~P~y~~~~~~~l~~~f~~ia~a 140 (304)
T 3cpr_A 104 AEAAASAGADGLLVVTPYYSKPSQEGLLAHFGAIAAA 140 (304)
T ss_dssp HHHHHHTTCSEEEEECCCSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEECCCCCCCCCHHHHHHHHHHHHHh
Confidence 9999999986 22222222245789999999887653
No 455
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=36.05 E-value=53 Score=30.55 Aligned_cols=41 Identities=24% Similarity=0.220 Sum_probs=26.3
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
....+.++.++.++++|+.+.+.-+ .++.=-....+.+. .+
T Consensus 274 GGit~~~~i~~~A~~~g~~~~~~~~---~es~i~~aa~~hla-a~ 314 (375)
T 1r0m_A 274 GGHAESRRVHDVAQSFGAPVWCGGM---LESGIGRAHNIHLS-TL 314 (375)
T ss_dssp TSHHHHHHHHHHHHHTTCCEEECCC---CCCHHHHHHHHHHT-TS
T ss_pred cCHHHHHHHHHHHHHcCCcEEecCc---cccHHHHHHHHHHH-cC
Confidence 4688888999999999998522222 34544445555555 44
No 456
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=36.01 E-value=71 Score=29.99 Aligned_cols=127 Identities=15% Similarity=0.097 Sum_probs=67.1
Q ss_pred CHHHHHHHHHHHHHc-CCc-EEE-EecccCCCCCChhhHHHHHHHHHHHhhcCc--EE-EEecCCCCHHHHHHHHHhccC
Q 016599 123 TKDAVMQAAQKAKEA-GST-RFC-MGAAWRDTIGRKTNFNQILEYVKDIRDMGM--EV-CCTLGMLEKHQAIELKKAGLT 196 (386)
Q Consensus 123 s~eeI~~~~~~~~~~-G~~-~v~-l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~--~i-~~t~g~l~~e~l~~Lk~aG~~ 196 (386)
++++-++.++.+.+. |-. .+. +-. + .....++..++++.+.+.++ .. .-....-+.+.++.+++.-
T Consensus 168 ~~~~d~~~v~avR~a~g~~~~l~~vDa--n----~~~~~~~A~~~~~~l~~~~i~~~~iEqP~~~~d~~~~~~l~~~~-- 239 (391)
T 3gd6_A 168 NLDADEEFLSRVKEEFGSRVRIKSYDF--S----HLLNWKDAHRAIKRLTKYDLGLEMIESPAPRNDFDGLYQLRLKT-- 239 (391)
T ss_dssp CHHHHHHHHHHHHHHHGGGCEEEEEEC--T----TCSCHHHHHHHHHHHTTCCSSCCEEECCSCTTCHHHHHHHHHHC--
T ss_pred CHHHHHHHHHHHHHHcCCCCcEEEecC--C----CCcCHHHHHHHHHHHHhcCCCcceecCCCChhhHHHHHHHHHHc--
Confidence 456666666665543 432 333 311 1 11345777788888887777 42 2111223567777777642
Q ss_pred eeec--ccCchHHHHhhhC------------CCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 197 AYNH--NLDTSREFYSKII------------TTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 197 ~v~i--~le~~~~~~~~i~------------~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+++ ++.+..+..+.+. +-....+.++....+.++|+.+..+.++ ++.=-+...+++...+
T Consensus 240 ~iPIdE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~~~~~~---es~i~~aa~~hlaaa~ 314 (391)
T 3gd6_A 240 DYPISEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKAAYAAEVASKDVVLGTTQ---ELSVGTAAMAHLGCSL 314 (391)
T ss_dssp SSCEEEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHHHHHHHHTTCEEEECCCC---CCHHHHHHHHHHHTTC
T ss_pred CCCcCCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHHHHHHHHcCCEEEecCCC---ccHHHHHHHHHHHHhC
Confidence 2333 2222222222221 1124778888888889999887665443 3443445556666555
No 457
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=35.97 E-value=60 Score=31.06 Aligned_cols=99 Identities=8% Similarity=-0.076 Sum_probs=53.0
Q ss_pred hhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc----CchHHHHhhhCC------------CCCH
Q 016599 156 TNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL----DTSREFYSKIIT------------TRSY 218 (386)
Q Consensus 156 ~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l----e~~~~~~~~i~~------------~~s~ 218 (386)
...++..++++.+.+.++.. .-....-+.+.++.+++.- .+++.. .+..+..+.+.. -...
T Consensus 214 ~t~~~A~~~~~~Le~~~i~~iEeP~~~~~~~~~~~l~~~~--~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~~~~GGi 291 (433)
T 3rcy_A 214 FTTAGAIRLGQAIEPYSPLWYEEPVPPDNVGAMAQVARAV--RIPVATGERLTTKAEFAPVLREGAAAILQPALGRAGGI 291 (433)
T ss_dssp BCHHHHHHHHHHHGGGCCSEEECCSCTTCHHHHHHHHHHS--SSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred CCHHHHHHHHHHhhhcCCCEEECCCChhhHHHHHHHHhcc--CCCEEecCCCCCHHHHHHHHHcCCCCEEEeCchhcCCH
Confidence 34567777777777766542 2111223566677777651 233322 222122222211 1235
Q ss_pred HHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 219 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.++....+...|+.+..+.. ++.=.+...+.+...+
T Consensus 292 t~~~kia~lA~~~gv~~~~h~~----~s~i~~aa~lhlaaa~ 329 (433)
T 3rcy_A 292 WEMKKVAAMAEVYNAQMAPHLY----AGPVEWAANVHFAASI 329 (433)
T ss_dssp HHHHHHHHHHHTTTCEECCCCS----SCHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCEEEecCC----CCHHHHHHHHHHHHHh
Confidence 6777788888888988776642 3444445566666555
No 458
>3ahx_A Beta-glucosidase A; cellulases, glycosyl hydrolase, manganese enhancement, hydro; HET: 7PE; 1.90A {Clostridium cellulovorans}
Probab=35.93 E-value=66 Score=31.04 Aligned_cols=57 Identities=12% Similarity=0.114 Sum_probs=41.7
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeEeEE
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s---~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
-++.++.|+++|++.+-+++ +-.++...=...-+ ++-.-+.|+.+++.||.+-+++.
T Consensus 61 ~~eDi~lm~~~G~~~~R~si-~Wsri~P~G~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~ 120 (453)
T 3ahx_A 61 YKEDVQLLKSLGIKSYRFSI-AWPRIFPKGFGEINQKGIQFYRDLIDELIKNDIEPAITIY 120 (453)
T ss_dssp HHHHHHHHHHTTCCEEEEEC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEeccc-CHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEec
Confidence 37889999999999999998 33555543111124 67777889999999998666553
No 459
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=35.93 E-value=49 Score=31.15 Aligned_cols=99 Identities=13% Similarity=0.128 Sum_probs=52.0
Q ss_pred hHHHHHHHHHHH--hhcCcEE-EEecCCCCHHHHHHHHHhccCeeeccc-Cc---hHHHHhhhCCC-----------CCH
Q 016599 157 NFNQILEYVKDI--RDMGMEV-CCTLGMLEKHQAIELKKAGLTAYNHNL-DT---SREFYSKIITT-----------RSY 218 (386)
Q Consensus 157 ~~~~l~~~i~~i--k~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v~i~l-e~---~~~~~~~i~~~-----------~s~ 218 (386)
..++..++++.+ .+.++.. .-....-+.+.+..|++.- .+.+.. |+ ..+..+.+..+ ...
T Consensus 200 ~~~~A~~~~~~L~~~~~~i~~iEeP~~~~d~~~~~~l~~~~--~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~GGi 277 (389)
T 3s5s_A 200 TAGEALALVAHARRLGADVALLEQPVPRDDWDGMKEVTRRA--GVDVAADESAASAEDVLRVAAERAATVVNIKLMKGGI 277 (389)
T ss_dssp CHHHHHHHHHHHHHTTCEEEEEECCSCTTCHHHHHHHHHHS--SSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHHH
T ss_pred CHHHHHHHHHHHhhCCCCeEEEECCCCcccHHHHHHHHhhC--CCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCCCCH
Confidence 456677777777 4444332 1111223566677776642 233322 12 12222222110 346
Q ss_pred HHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 219 DERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 219 ~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.++.++.+.+.|+.+..+.++ |+.=-+...+.+...+
T Consensus 278 t~~~~i~~~A~~~gi~~~~~~~~---es~ig~aa~~hlaaa~ 316 (389)
T 3s5s_A 278 AEALDIAAVARAAGLGLMIGGMV---ESVLAMTASACFAAGL 316 (389)
T ss_dssp HHHHHHHHHHHHTTCEEEECCSS---CCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCeEEecCCc---ccHHHHHHHHHHHhhC
Confidence 77788888889999987766554 3433445556666555
No 460
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=35.92 E-value=1.2e+02 Score=27.10 Aligned_cols=122 Identities=11% Similarity=-0.004 Sum_probs=72.5
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhhc---CcEEEEecCC-CCHHHHHHH---HH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM---GMEVCCTLGM-LEKHQAIEL---KK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~~---g~~i~~t~g~-l~~e~l~~L---k~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+. .+++....|. .+.+.++.. ++
T Consensus 21 iD~~~l~~lv~~li~~Gv~gl~~~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 21 VDIDAMIAHARRCLSNGCDSVTLFGTT----GEGCSVGSRERQAILSSFIAAGIAPSRIVTGVLVDSIEDAADQSAEALN 96 (294)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEEESSTT----TTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEECCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCCCccHHHHHHHHHHHHh
Confidence 788999999999999999998875532 332 4456666666665532 2455554444 445554444 55
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-c---CCeeeEeEEeec---CCCHHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-A---GINVCSGGIIGL---GEAEEDRVGLL 254 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~---Gi~v~~~~i~Gl---get~ed~~~~l 254 (386)
+|+|.+.+-.-.+ .+..+.+..++-.+.+.+ . ++++-..-+.+. .-+.+.+.++.
T Consensus 97 ~Gadavlv~~P~y-------~~~~s~~~l~~~f~~va~a~p~~~lPiilYn~P~~tg~~l~~~~~~~La 158 (294)
T 3b4u_A 97 AGARNILLAPPSY-------FKNVSDDGLFAWFSAVFSKIGKDARDILVYNIPSVTMVTLSVELVGRLK 158 (294)
T ss_dssp TTCSEEEECCCCS-------SCSCCHHHHHHHHHHHHHHHCTTCCCEEEEECHHHHSCCCCHHHHHHHH
T ss_pred cCCCEEEEcCCcC-------CCCCCHHHHHHHHHHHHHhcCCCCCcEEEEECcchhCcCCCHHHHHHHH
Confidence 6999887643221 111356666766666554 3 677654433332 34555555553
No 461
>2z1k_A (NEO)pullulanase; hydrolase, structural genomics, NPPSFA, national project on structural and functional analyses; HET: GLC; 2.30A {Thermus thermophilus}
Probab=35.89 E-value=21 Score=34.41 Aligned_cols=80 Identities=13% Similarity=0.122 Sum_probs=48.9
Q ss_pred HHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeeec-ccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCee
Q 016599 158 FNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYNH-NLDTSREFYSKIITTRSYDERLETLKHVREAGINV 235 (386)
Q Consensus 158 ~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~i-~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v 235 (386)
+..+.+.+..+++.|+. |.+++-.-.. ...|-+.... .++. . -.+.++..+.++.+|+.||+|
T Consensus 49 ~~gi~~~LdyL~~LGv~~I~l~Pi~~~~------~~~gY~~~dy~~idp------~---~Gt~~df~~lv~~~h~~Gi~V 113 (475)
T 2z1k_A 49 LWGVAEKLPYLLDLGVEAIYLNPVFAST------ANHRYHTVDYFQVDP------I---LGGNEALRHLLEVAHAHGVRV 113 (475)
T ss_dssp HHHHHHTHHHHHHHTCCEEEECCCEEES------STTCCSEEEEEEECG------G---GTCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHHHHhHHHHHcCCCEEEECCCcCCC------CCCCcCCCCcCccCc------c---cCCHHHHHHHHHHHHHCCCEE
Confidence 55677777888888876 4444321100 0124333321 2221 1 246888889999999999999
Q ss_pred eEeEEeec-CCCHHHHHH
Q 016599 236 CSGGIIGL-GEAEEDRVG 252 (386)
Q Consensus 236 ~~~~i~Gl-get~ed~~~ 252 (386)
-.++++.+ +....-+.+
T Consensus 114 ilD~V~NH~~~~~~~f~~ 131 (475)
T 2z1k_A 114 ILDGVFNHTGRGFFAFQH 131 (475)
T ss_dssp EEEECCSBCCTTSHHHHH
T ss_pred EEEEecccccCCCHHHHH
Confidence 99999988 544333333
No 462
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=35.84 E-value=2e+02 Score=24.41 Aligned_cols=114 Identities=10% Similarity=-0.053 Sum_probs=62.9
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEE-EecCC-C----CHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVC-CTLGM-L----EKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~-~t~g~-l----~~e~l~~Lk~aG~ 195 (386)
+++++.++ .+.+.|++.|-+..... +.+ ..-+.+.++.+.+++.|+++. ++... . ..+.++..++.|+
T Consensus 30 ~~~~~~l~---~~~~~G~~~vEl~~~~~-~~~--~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~~~i~~A~~lGa 103 (257)
T 3lmz_A 30 FDLDTTLK---TLERLDIHYLCIKDFHL-PLN--STDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEIDRAFDYAKRVGV 103 (257)
T ss_dssp SCHHHHHH---HHHHTTCCEEEECTTTS-CTT--CCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHHHHHHHHHHHTC
T ss_pred CCHHHHHH---HHHHhCCCEEEEecccC-CCC--CCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHHHHHHHHHHhCC
Confidence 46666655 45568999988765311 111 123445555556667788743 22111 1 2444555567798
Q ss_pred CeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEe--e-cCCCHHHHHHHHH
Q 016599 196 TAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGII--G-LGEAEEDRVGLLH 255 (386)
Q Consensus 196 ~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~--G-lget~ed~~~~l~ 255 (386)
..|.+... .+.+-+..+.+.+.|+.+.....- + .-.+.+++.++++
T Consensus 104 ~~v~~~p~--------------~~~l~~l~~~a~~~gv~l~lEn~~~~~~~~~~~~~~~~ll~ 152 (257)
T 3lmz_A 104 KLIVGVPN--------------YELLPYVDKKVKEYDFHYAIHLHGPDIKTYPDATDVWVHTK 152 (257)
T ss_dssp SEEEEEEC--------------GGGHHHHHHHHHHHTCEEEEECCCTTCSSSCSHHHHHHHHT
T ss_pred CEEEecCC--------------HHHHHHHHHHHHHcCCEEEEecCCCcccccCCHHHHHHHHH
Confidence 88876311 122334566778889987766552 2 1346666555543
No 463
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=35.80 E-value=1.6e+02 Score=24.31 Aligned_cols=63 Identities=14% Similarity=0.189 Sum_probs=41.7
Q ss_pred HHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEe-cCCCC-HHHHHHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCT-LGMLE-KHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t-~g~l~-~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+.+.|++.+.+... + ..+.+.++++.+++.|+.+.+. .+.-+ .+.++.+.++|++.+.++
T Consensus 70 ~~~~~~~Gad~v~v~~~-------~-~~~~~~~~~~~~~~~g~~~~v~~~~~~t~~~~~~~~~~~g~d~i~v~ 134 (211)
T 3f4w_A 70 SQLLFDAGADYVTVLGV-------T-DVLTIQSCIRAAKEAGKQVVVDMICVDDLPARVRLLEEAGADMLAVH 134 (211)
T ss_dssp HHHHHHTTCSEEEEETT-------S-CHHHHHHHHHHHHHHTCEEEEECTTCSSHHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHhcCCCEEEEeCC-------C-ChhHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHcCCCEEEEc
Confidence 56677789988877431 1 1245667777777778876543 22223 477888999999988764
No 464
>1v08_A Beta-glucosidase; glycoside hydrolase, dimboa-glucoside, inhibitor, PEST defense, family GH1, hydrolase, chloroplast, transit peptide, 3D-structure; HET: NTZ; 1.9A {Zea mays} SCOP: c.1.8.4 PDB: 1e4l_A* 1e4n_A* 1e56_A* 1e55_A* 1e1e_A 1e1f_A* 1h49_A* 1hxj_A
Probab=35.62 E-value=69 Score=31.44 Aligned_cols=57 Identities=18% Similarity=0.128 Sum_probs=42.6
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeEeEE
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~--~~~s---~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
-+|.++.|+++|++.+.+++ +-.++...=. ..-+ ++-.-+.|+.+++.||.+-+++.
T Consensus 80 ~~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL~ 141 (512)
T 1v08_A 80 YKTDVRLLKEMGMDAYRFSI-SWPRILPKGTKEGGINPDGIKYYRNLINLLLENGIEPYVTIF 141 (512)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-CHHHHSTTSSTTTCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCeEeccc-CHhhhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 47889999999999999998 4355555421 1224 77777889999999999766654
No 465
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=35.54 E-value=1.6e+02 Score=26.44 Aligned_cols=120 Identities=13% Similarity=0.021 Sum_probs=69.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 18 iD~~~l~~lv~~li~~Gv~gi~v~Gtt----GE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 18 VDEKALAGLVDWQIKHGAHGLVPVGTT----GESPTLTEEEHKRVVALVAEQAQGRVPVIAGAGSNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEECSSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHhCCCCeEEEccCCCCHHHHHHHHHHHHh
Confidence 788999999999999999998775432 332 334555555555442 13565555554 4455544 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeec---CCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .++++-..-+.+. .-+.+.+.++
T Consensus 94 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P~~tg~~l~~~~~~~L 150 (297)
T 2rfg_A 94 AGADAVLCVAGYY-------N-RPSQEGLYQHFKMVHDAIDIPIIVYNIPPRAVVDIKPETMARL 150 (297)
T ss_dssp HTCSEEEECCCTT-------T-CCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred cCCCEEEEcCCCC-------C-CCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCCCCHHHHHHH
Confidence 7999887643211 1 1255666666666444 4676544333332 3355554444
No 466
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=35.47 E-value=62 Score=28.01 Aligned_cols=93 Identities=15% Similarity=0.061 Sum_probs=46.6
Q ss_pred HHHHHHHhhcCcE-EEEecCC-----CCHHHHHHHHHhccCeeecccCchHHHHhhhCCCCCH-HHHHHHHHHHHHcCCe
Q 016599 162 LEYVKDIRDMGME-VCCTLGM-----LEKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRSY-DERLETLKHVREAGIN 234 (386)
Q Consensus 162 ~~~i~~ik~~g~~-i~~t~g~-----l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s~-~~~l~~i~~a~~~Gi~ 234 (386)
.+.++.+++.|+. +.+.... ...+..+.++++|+..+.+..... .....+. +...+.++.+.+.|.+
T Consensus 26 ~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~------~~~~~~~~~~~~~~i~~A~~lGa~ 99 (264)
T 1yx1_A 26 ASFLPLLAMAGAQRVELREELFAGPPDTEALTAAIQLQGLECVFSSPLEL------WREDGQLNPELEPTLRRAEACGAG 99 (264)
T ss_dssp GGGHHHHHHHTCSEEEEEGGGCSSCCCHHHHHHHHHHTTCEEEEEEEEEE------ECTTSSBCTTHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHcCCCEEEEEHHhcCCCHHHHHHHHHHHHcCCEEEEecchhh------cCCchhHHHHHHHHHHHHHHcCCC
Confidence 4566666666655 3332211 224555667778886544321111 0111133 5566788888888986
Q ss_pred eeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 235 VCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 235 v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
.-. +..|.......+..+.+.+++.+
T Consensus 100 ~v~-~~~g~~~~~~~l~~l~~~a~~~G 125 (264)
T 1yx1_A 100 WLK-VSLGLLPEQPDLAALGRRLARHG 125 (264)
T ss_dssp EEE-EEEECCCSSCCHHHHHHHHTTSS
T ss_pred EEE-EecCCCCcHHHHHHHHHHHHhcC
Confidence 322 22333111124555666666664
No 467
>2qv5_A AGR_C_5032P, uncharacterized protein ATU2773; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Agrobacterium tumefaciens str}
Probab=35.44 E-value=1.5e+02 Score=26.25 Aligned_cols=136 Identities=13% Similarity=0.024 Sum_probs=68.9
Q ss_pred CCHHHHHHHHHHHHHc--CCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHH-HHHHHHhccCee
Q 016599 122 MTKDAVMQAAQKAKEA--GSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQ-AIELKKAGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~--G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~-l~~Lk~aG~~~v 198 (386)
++.+||.+.++.+.+. ++..+.--.|...+. ..+.+-.+++.+++.|+-.. ..++..... .+.-++.|+..+
T Consensus 107 ~s~~ei~~~l~~al~~vP~a~GvnNHmGS~~T~----~~~~M~~vm~~L~~~gL~Fl-DS~Ts~~S~a~~~A~~~gvp~~ 181 (261)
T 2qv5_A 107 DPAKVNIDRLHRSMAKITNYTGVMNYLGGRFLA----EQSALEPVMRDIGKRGLLFL-DDGSSAQSLSGGIAKAISAPQG 181 (261)
T ss_dssp SCHHHHHHHHHHHHTTCCCCSEEEEEECTTGGG----CHHHHHHHHHHHHHTTCEEE-ECSCCTTCCHHHHHHHHTCCEE
T ss_pred CCHHHHHHHHHHHHHHCCCcEEEecccccchhc----CHHHHHHHHHHHHHCCCEEE-cCCCCcccHHHHHHHHcCCCeE
Confidence 8999999999887764 344443222223322 23445555566777776543 223222222 233355688776
Q ss_pred e--cccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCC-CCCeEeeeeeee
Q 016599 199 N--HNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPT-HPESVPINALLA 274 (386)
Q Consensus 199 ~--i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~-~~~~v~~~~f~P 274 (386)
. +-+|.. .. ..| -.+..++++.+++.|.-|. +|+- ..+.+..+.+++..+.. ++..+++..+..
T Consensus 182 ~rdvFLD~~~~~--~~I-----~~qL~~a~~~Ar~~G~AIa----IGhp-~p~Ti~aL~~~~~~l~~~gi~LVpvS~ll~ 249 (261)
T 2qv5_A 182 FADVLLDGEVTE--ASI-----LRKLDDLERIARRNGQAIG----VASA-FDESIAAISKWSREAGGRGIEIVGVSALVS 249 (261)
T ss_dssp ECSEETTSSCSH--HHH-----HHHHHHHHHHHHHHSEEEE----EEEC-CHHHHHHHHHHHHHGGGGTEEECCHHHHC-
T ss_pred EeeeecCCCCCH--HHH-----HHHHHHHHHHHHhcCcEEE----EeCC-CHHHHHHHHHHhhhhhhCCeEEEEHHHHhh
Confidence 6 444432 10 011 1233466778888886544 4441 23445555555555421 245555555543
No 468
>3c2e_A Nicotinate-nucleotide pyrophosphorylase; qprtase, prtase, BNA6, mechanism, cytoplasm, glycosyltransferase, nucleus; 1.90A {Saccharomyces cerevisiae} PDB: 3c2f_A* 3c2o_A* 3c2v_A* 3c2r_A*
Probab=35.42 E-value=19 Score=32.70 Aligned_cols=42 Identities=10% Similarity=0.202 Sum_probs=17.7
Q ss_pred HHHHHHHHHHhhcC-----cEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 159 NQILEYVKDIRDMG-----MEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 159 ~~l~~~i~~ik~~g-----~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+.+.+.++.++..+ +.+..+.|. +.+.+..+.++|+|.+.++
T Consensus 231 ~~l~~~v~~l~~~~~g~~~v~I~ASGGI-t~~ni~~~~~~GvD~i~vG 277 (294)
T 3c2e_A 231 DGLKMCAQSLKNKWNGKKHFLLECSGGL-NLDNLEEYLCDDIDIYSTS 277 (294)
T ss_dssp ------------------CCEEEEECCC-CC------CCCSCSEEECG
T ss_pred HHHHHHHHHhcccccCCCCeEEEEECCC-CHHHHHHHHHcCCCEEEEe
Confidence 45555555555432 567777665 8999999999999999875
No 469
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=35.36 E-value=79 Score=27.24 Aligned_cols=74 Identities=18% Similarity=0.095 Sum_probs=0.0
Q ss_pred HHHHHHHHHhccCeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeec--CCCH-------HHHHHH
Q 016599 184 KHQAIELKKAGLTAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGL--GEAE-------EDRVGL 253 (386)
Q Consensus 184 ~e~l~~Lk~aG~~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl--get~-------ed~~~~ 253 (386)
++.++.++++|++.|-+..... +...+.++ +.+.+.|+.+.+....+. ..+. +.+.+.
T Consensus 21 ~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~------------~~l~~~gl~~~~~~~~~~~~~~d~~~r~~~~~~~~~~ 88 (275)
T 3qc0_A 21 AEAVDICLKHGITAIAPWRDQVAAIGLGEAG------------RIVRANGLKLTGLCRGGFFPAPDASGREKAIDDNRRA 88 (275)
T ss_dssp HHHHHHHHHTTCCEEECBHHHHHHHCHHHHH------------HHHHHHTCEESCEEEEECCCCSSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEeccccccccCHHHHH------------HHHHHcCCceEEeecCCCcCCCCHHHHHHHHHHHHHH
Q ss_pred HHHHhcCCCCCCeEeeee
Q 016599 254 LHTLATLPTHPESVPINA 271 (386)
Q Consensus 254 l~~l~~l~~~~~~v~~~~ 271 (386)
++.+..+| +..+.+..
T Consensus 89 i~~a~~lG--~~~v~~~~ 104 (275)
T 3qc0_A 89 VDEAAELG--ADCLVLVA 104 (275)
T ss_dssp HHHHHHTT--CSCEEEEC
T ss_pred HHHHHHhC--CCEEEEee
No 470
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=35.31 E-value=1.4e+02 Score=26.85 Aligned_cols=120 Identities=12% Similarity=0.065 Sum_probs=68.1
Q ss_pred CHHHHHHHHHHHHHc----CCcEEEEecccC--CCCC---ChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHH
Q 016599 123 TKDAVMQAAQKAKEA----GSTRFCMGAAWR--DTIG---RKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKK 192 (386)
Q Consensus 123 s~eeI~~~~~~~~~~----G~~~v~l~~g~~--~~~g---e~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~ 192 (386)
+.|.+++.++.+++. ++..++-.+-+. -|.. .-...+.=++++++++ +.|+.+.++. ++.+.++.+.+
T Consensus 32 ~~e~~~~~A~~lk~~~~~~~~~~v~k~~f~KapRTs~~sf~G~g~~~GL~~L~~~~~e~Glp~~Tev--~d~~~v~~l~~ 109 (285)
T 3sz8_A 32 SLDFTLDVCGEYVAVTRKLGIPFVFKASFDKANRSSIHSYRGVGLDEGLKIFAEVKARFGVPVITDV--HEAEQAAPVAE 109 (285)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCCEEEEEESCCTTCSSTTSCCCSCHHHHHHHHHHHHHHHCCCEEEEC--CSGGGHHHHHT
T ss_pred CHHHHHHHHHHHHHHHHhheeeeEEEeecccCCCCCCCCcCCcCHHHHHHHHHHHHHhcCCeEEEEe--CCHHHHHHHHH
Confidence 577888877777654 443333332211 0110 0122445555666665 6799887664 57788888888
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
. ++.+.++--.. .+++ .++.+.+.|.+|.. =-|..-+.+|+...++.+.+-|
T Consensus 110 ~-vd~lqIgA~~~----------~n~~----LLr~va~~gkPVil--K~G~~~t~~ei~~ave~i~~~G 161 (285)
T 3sz8_A 110 I-ADVLQVPAFLA----------RQTD----LVVAIAKAGKPVNV--KKPQFMSPTQLKHVVSKCGEVG 161 (285)
T ss_dssp T-CSEEEECGGGT----------TCHH----HHHHHHHTSSCEEE--ECCTTSCGGGTHHHHHHHHHTT
T ss_pred h-CCEEEECcccc----------CCHH----HHHHHHccCCcEEE--eCCCCCCHHHHHHHHHHHHHcC
Confidence 7 99988854111 1222 33444555655322 1122237788888888888776
No 471
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=35.30 E-value=1e+02 Score=29.97 Aligned_cols=69 Identities=14% Similarity=0.138 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhc--CcEEEEecCCCCHHHHHHHHHhccCeeeccc
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDM--GMEVCCTLGMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~--g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
+..+.++.+.+.|++.+.+.++...+ +...+.++.+++. ++.+.. .+..+.+.++.+.++|+|.+.++.
T Consensus 255 ~~~~~a~~~~~aG~d~v~i~~~~G~~-------~~~~~~i~~i~~~~~~~pvi~-~~v~t~~~a~~l~~aGad~I~vg~ 325 (514)
T 1jcn_A 255 DDKYRLDLLTQAGVDVIVLDSSQGNS-------VYQIAMVHYIKQKYPHLQVIG-GNVVTAAQAKNLIDAGVDGLRVGM 325 (514)
T ss_dssp THHHHHHHHHHTTCSEEEECCSCCCS-------HHHHHHHHHHHHHCTTCEEEE-EEECSHHHHHHHHHHTCSEEEECS
T ss_pred hhHHHHHHHHHcCCCEEEeeccCCcc-------hhHHHHHHHHHHhCCCCceEe-cccchHHHHHHHHHcCCCEEEECC
No 472
>1s2w_A Phosphoenolpyruvate phosphomutase; phosphonopyruvate, phosphonate biosynthesis pathway, isomera; 1.69A {Mytilus edulis} SCOP: c.1.12.7 PDB: 1m1b_A 1s2t_A 1s2v_A 1pym_A 1s2u_A
Probab=35.04 E-value=2.5e+02 Score=25.19 Aligned_cols=122 Identities=12% Similarity=0.068 Sum_probs=74.8
Q ss_pred EecCCCCHHHHHHHHHhccCeeecccCchHHHHhhhC-CCCCHHHHHHHHHHHHHc-CCeeeEeEEeecCCCHHHHHHHH
Q 016599 177 CTLGMLEKHQAIELKKAGLTAYNHNLDTSREFYSKII-TTRSYDERLETLKHVREA-GINVCSGGIIGLGEAEEDRVGLL 254 (386)
Q Consensus 177 ~t~g~l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~-~~~s~~~~l~~i~~a~~~-Gi~v~~~~i~Glget~ed~~~~l 254 (386)
+.++..+.-..+.+.++|++.+.++=.+....+-.=. ..-++++.+..++.+.+. .+++.+++=.|+| +.+++.+++
T Consensus 22 ~~~~a~D~~sA~~~~~aG~~ai~vsg~~~a~~lG~pD~~~vt~~em~~~~~~I~~~~~~PviaD~d~Gyg-~~~~v~~~v 100 (295)
T 1s2w_A 22 FIMEAHNGLSARIVQEAGFKGIWGSGLSVSAQLGVRDSNEASWTQVVEVLEFMSDASDVPILLDADTGYG-NFNNARRLV 100 (295)
T ss_dssp EEEEECSHHHHHHHHHHTCSCEEECCHHHHHTC---------CHHHHHHHHHHHHTCSSCEEEECCSSCS-SHHHHHHHH
T ss_pred EEecCCCHHHHHHHHHcCCCEEEeChHHHHHhCCCCCCCCCCHHHHHHHHHHHHhcCCCCEEecCCCCCC-CHHHHHHHH
Confidence 3345578888888899999999886333211110000 123788888888886654 6778899888877 467888888
Q ss_pred HHHhcCCCCCCeEeeee--eeecCCCCCC--CCCCCCHHHHHHHHHHHHHhC
Q 016599 255 HTLATLPTHPESVPINA--LLAVKGTPLQ--DQKPVEIWEMIRMIATARIVM 302 (386)
Q Consensus 255 ~~l~~l~~~~~~v~~~~--f~P~~gT~l~--~~~~~s~~e~~~~~a~~R~~l 302 (386)
..+.+.| +.-+.+-- +.|.-|. +. .....+.+++...+..++...
T Consensus 101 ~~l~~aG--aagv~iED~~~~k~cgH-~gg~~k~l~p~~e~~~rI~Aa~~a~ 149 (295)
T 1s2w_A 101 RKLEDRG--VAGACLEDKLFPKTNSL-HDGRAQPLADIEEFALKIKACKDSQ 149 (295)
T ss_dssp HHHHHTT--CCEEEEECBCC---------CTTCCBCCHHHHHHHHHHHHHHC
T ss_pred HHHHHcC--CcEEEECCCCCCccccc-cCCCCCcccCHHHHHHHHHHHHHhc
Confidence 8888886 55665522 2222221 11 234567888888877777654
No 473
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=35.04 E-value=78 Score=28.11 Aligned_cols=109 Identities=13% Similarity=0.052 Sum_probs=53.3
Q ss_pred CCHHHHHHHHHHHHHcCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcE-EEEecCCCCHHHHHHHHHhccCeee
Q 016599 122 MTKDAVMQAAQKAKEAGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGME-VCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~-i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
.+.+|++..++...+. .+ .+++ . +.+.++.. ..++..+.+.++-+.|.. +.+.-|.--.+.++.+.++|+..+.
T Consensus 60 vtldemi~h~~aV~r~-~~~~~vv-a-D~pfgsy~-~~~~a~~~a~rl~kaGa~aVklEgg~e~~~~I~al~~agipV~g 135 (264)
T 1m3u_A 60 VTVADIAYHTAAVRRG-APNCLLL-A-DLPFMAYA-TPEQAFENAATVMRAGANMVKIEGGEWLVETVQMLTERAVPVCG 135 (264)
T ss_dssp CCHHHHHHHHHHHHHH-CTTSEEE-E-ECCTTSSS-SHHHHHHHHHHHHHTTCSEEECCCSGGGHHHHHHHHHTTCCEEE
T ss_pred cCHHHHHHHHHHHHhh-CCCCcEE-E-ECCCCCcC-CHHHHHHHHHHHHHcCCCEEEECCcHHHHHHHHHHHHCCCCeEe
Confidence 6777777776665542 22 2222 1 12221111 234444444444334544 2233343446677777777765543
Q ss_pred -ccc--CchHH--HHhhhCCCC-CHHHHHHHHHHHHHcCCe
Q 016599 200 -HNL--DTSRE--FYSKIITTR-SYDERLETLKHVREAGIN 234 (386)
Q Consensus 200 -i~l--e~~~~--~~~~i~~~~-s~~~~l~~i~~a~~~Gi~ 234 (386)
+++ ++... -|....++. ..++.++-.+.+.++|-.
T Consensus 136 HiGLtPq~v~~~ggf~v~grt~~~a~~~i~rA~a~~eAGA~ 176 (264)
T 1m3u_A 136 HLGLTPQSVNIFGGYKVQGRGDEAGDQLLSDALALEAAGAQ 176 (264)
T ss_dssp EEESCGGGHHHHTSSCCCCCSHHHHHHHHHHHHHHHHHTCC
T ss_pred eecCCceeecccCCeEEEeCCHHHHHHHHHHHHHHHHCCCc
Confidence 233 22211 111111211 357888989999999975
No 474
>1ea9_C Cyclomaltodextrinase; hydrolase, glycosidase; 3.2A {Bacillus SP} SCOP: b.1.18.2 b.71.1.1 c.1.8.1
Probab=34.96 E-value=32 Score=34.31 Aligned_cols=32 Identities=19% Similarity=0.202 Sum_probs=27.9
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeec-CCCH
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGL-GEAE 247 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-get~ 247 (386)
.+.++..+.++.+|+.||.|-.++++.+ +...
T Consensus 216 Gt~~df~~lv~~~H~~Gi~VilD~V~NH~~~~~ 248 (583)
T 1ea9_C 216 GDKDTLKKLVDLCHERGIRVLLDAVFNHSGRTF 248 (583)
T ss_dssp CCHHHHHHHHHHHTTTTCEEEEECCCSBCCTTT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEEccccCCCcc
Confidence 3789999999999999999999999998 5543
No 475
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=34.92 E-value=1.4e+02 Score=27.00 Aligned_cols=122 Identities=13% Similarity=0.033 Sum_probs=71.1
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhhc---CcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRDM---GMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~~---g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+. .+++....|. .+.+.++ ..++
T Consensus 32 iD~~~l~~lv~~li~~Gv~Gl~v~GtT----GE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~A~~ 107 (307)
T 3s5o_A 32 VDYGKLEENLHKLGTFPFRGFVVQGSN----GEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSGCESTQATVEMTVSMAQ 107 (307)
T ss_dssp BCHHHHHHHHHHHTTSCCSEEEESSGG----GTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cchhhCCHHHHHHHHHHHHHHcCCCCcEEEecCCCCHHHHHHHHHHHHH
Confidence 788999999999999999999875532 332 3445666666665532 4566555554 4555544 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEeec---CCCHHHHHHH
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGIIGL---GEAEEDRVGL 253 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~Gl---get~ed~~~~ 253 (386)
+|+|.+.+-.-.+ . .+..+.+..++-.+.+.+ .++++-.--+.+. .-+.+.+.++
T Consensus 108 ~Gadavlv~~P~y----~--~~~~s~~~l~~~f~~ia~a~~lPiilYn~P~~tg~~l~~~~~~~L 166 (307)
T 3s5o_A 108 VGADAAMVVTPCY----Y--RGRMSSAALIHHYTKVADLSPIPVVLYSVPANTGLDLPVDAVVTL 166 (307)
T ss_dssp TTCSEEEEECCCT----T--GGGCCHHHHHHHHHHHHHHCSSCEEEEECHHHHSCCCCHHHHHHH
T ss_pred cCCCEEEEcCCCc----C--CCCCCHHHHHHHHHHHHhhcCCCEEEEeCCcccCCCCCHHHHHHH
Confidence 7999887632111 0 011255666666666544 4677554433332 3455554443
No 476
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=34.81 E-value=21 Score=35.03 Aligned_cols=30 Identities=10% Similarity=0.191 Sum_probs=27.0
Q ss_pred CCHHHHHHHHHHHHHcCCeeeEeEEeec-CC
Q 016599 216 RSYDERLETLKHVREAGINVCSGGIIGL-GE 245 (386)
Q Consensus 216 ~s~~~~l~~i~~a~~~Gi~v~~~~i~Gl-ge 245 (386)
.+.++..+.++.||+.||+|-.++++.+ +.
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~VilD~V~NHts~ 107 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVMDLVVNHTSD 107 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECCSBCCT
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECccCCcC
Confidence 4788999999999999999999999988 54
No 477
>4do4_A Alpha-N-acetylgalactosaminidase; pharmacological chaperone, (beta/alpha)8 barrel, glycosidase carbohydrate-binding protein, glycoprotein, lysosome; HET: NAG BMA MAN DJN CIT FUC; 1.40A {Homo sapiens} PDB: 3h54_A* 3h53_A* 3igu_A* 3h55_A* 4do5_A* 4do6_A* 1ktb_A* 1ktc_A*
Probab=34.74 E-value=78 Score=29.55 Aligned_cols=100 Identities=14% Similarity=0.237 Sum_probs=59.2
Q ss_pred CCCcCCCCCCCCCCCCCCCcccCCCCHHHHHHHHHHHHH-----cCCcEEEEecccCC---CCCC----hhhHHH-HHHH
Q 016599 98 GCSEDCSYCPQSSRYDTGVKGQKLMTKDAVMQAAQKAKE-----AGSTRFCMGAAWRD---TIGR----KTNFNQ-ILEY 164 (386)
Q Consensus 98 ~C~~~C~fC~~~~~~~~~~~~~~~~s~eeI~~~~~~~~~-----~G~~~v~l~~g~~~---~~ge----~~~~~~-l~~~ 164 (386)
.|.-+|.+|.+.... . ....++.+.|.+.++.+.+ .|...|.|-.||.. ..|. +..|+. +..+
T Consensus 13 WnSW~~~~~~i~~~~---~-~~~~~se~~i~~~ad~~~~~gl~~~Gy~yv~iDdgW~~~rd~~G~~~~d~~rFP~G~k~l 88 (400)
T 4do4_A 13 WLAWERFRCNINCDE---D-PKNCISEQLFMEMADRMAQDGWRDMGYTYLNIDDCWIGGRDASGRLMPDPKRFPHGIPFL 88 (400)
T ss_dssp EESHHHHTTCCCTTT---C-TTTSSSHHHHHHHHHHHHHSSHHHHTCCEEECCSSCEEEECTTCCEEECTTTSTTCHHHH
T ss_pred ccchHhhccccCccc---c-ccccccHHHHHHHHHHHHHCcchhhCCeEEEECCCcccCCCCCCCEeECcccCCcccHHH
Confidence 466667777654221 1 1123678889988888654 46667777544421 1121 122222 7778
Q ss_pred HHHHhhcCcE--EEEecCC----------C--CHHHHHHHHHhccCeeecc
Q 016599 165 VKDIRDMGME--VCCTLGM----------L--EKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 165 i~~ik~~g~~--i~~t~g~----------l--~~e~l~~Lk~aG~~~v~i~ 201 (386)
++.+++.|+. +....|. . ....++.+++-|++.+-+.
T Consensus 89 adyih~~Glk~Giy~~~~~~~c~g~~~~~~~~~~~da~~~a~wGvdylK~D 139 (400)
T 4do4_A 89 ADYVHSLGLKLGIYADMGNFTCMGYPGTTLDKVVQDAQTFAEWKVDMLKLD 139 (400)
T ss_dssp HHHHHHTTCEEEEEEEBSSBCTTSCBCBCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHCCceEEEecCCCCcccCCCCchhHhHHHHHHHHHHHhCCceEeec
Confidence 8888888877 3333332 1 2445778888999998764
No 478
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=34.72 E-value=2e+02 Score=24.03 Aligned_cols=167 Identities=8% Similarity=0.023 Sum_probs=80.9
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCc---EEEEecCCCCHHHHHHHHHhccCeee
Q 016599 123 TKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGM---EVCCTLGMLEKHQAIELKKAGLTAYN 199 (386)
Q Consensus 123 s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~---~i~~t~g~l~~e~l~~Lk~aG~~~v~ 199 (386)
+.+++.+ +..+.+.|++-+.+- .. ....+.+.++++.+++.+. .+.++ +.++.+.++|++.+.
T Consensus 28 ~~~~l~~-~~~~~~~G~~~v~lr----~~---~~~~~~~~~~~~~l~~~~~~~~~l~v~------~~~~~a~~~gad~v~ 93 (221)
T 1yad_A 28 PVEELAR-IIITIQNEVDFIHIR----ER---SKSAADILKLLDLIFEGGIDKRKLVMN------GRVDIALFSTIHRVQ 93 (221)
T ss_dssp CHHHHHH-HHHHHGGGCSEEEEC----CT---TSCHHHHHHHHHHHHHTTCCGGGEEEE------SCHHHHHTTTCCEEE
T ss_pred CcchHHH-HHHHHHCCCCEEEEc----cC---CCCHHHHHHHHHHHHHhcCcCCeEEEe------ChHHHHHHcCCCEEE
Confidence 4455533 566667788866552 11 1345667777777765432 24443 245778889999998
Q ss_pred cccCchHHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCCCCCCeEeeeeeeecCCCC
Q 016599 200 HNLDTSREFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLPTHPESVPINALLAVKGTP 279 (386)
Q Consensus 200 i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~~~~~~v~~~~f~P~~gT~ 279 (386)
++.+.. .. +.++.+.. |+.+... -.|.++... +...+ ++.+.+..+.+.+.
T Consensus 94 l~~~~~-----------~~----~~~~~~~~-~~~ig~s-----v~t~~~~~~----a~~~g--aD~i~~~~~f~~~~-- 144 (221)
T 1yad_A 94 LPSGSF-----------SP----KQIRARFP-HLHIGRS-----VHSLEEAVQ----AEKED--ADYVLFGHVFETDC-- 144 (221)
T ss_dssp ECTTSC-----------CH----HHHHHHCT-TCEEEEE-----ECSHHHHHH----HHHTT--CSEEEEECCC------
T ss_pred eCCCcc-----------CH----HHHHHHCC-CCEEEEE-----cCCHHHHHH----HHhCC--CCEEEECCccccCC--
Confidence 864321 11 22233332 4443332 135565433 33454 77777765433211
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhCCCcceeecCcccccChhHHHhhhhcCccccccCCcccc
Q 016599 280 LQDQKPVEIWEMIRMIATARIVMPKAMVRLSAGRVRFSMPEQALCFLAGANSIFTGEKLLT 340 (386)
Q Consensus 280 l~~~~~~s~~e~~~~~a~~R~~lp~~~i~i~~g~~~~~~~~~~~~l~~Gan~~~~g~~~~t 340 (386)
....++. ..+. +...+... +..+-..+| + .++.-...+.+||+.+..|..+..
T Consensus 145 ~~g~~~~-~~~~---l~~~~~~~-~~pvia~GG-I--~~~nv~~~~~~Ga~gv~vgs~i~~ 197 (221)
T 1yad_A 145 KKGLEGR-GVSL---LSDIKQRI-SIPVIAIGG-M--TPDRLRDVKQAGADGIAVMSGIFS 197 (221)
T ss_dssp ------C-HHHH---HHHHHHHC-CSCEEEESS-C--CGGGHHHHHHTTCSEEEESHHHHT
T ss_pred CCCCCCC-CHHH---HHHHHHhC-CCCEEEECC-C--CHHHHHHHHHcCCCEEEEhHHhhC
Confidence 1111112 2222 22222222 222222333 2 334445667799999988875544
No 479
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=34.61 E-value=1.1e+02 Score=27.94 Aligned_cols=72 Identities=11% Similarity=0.149 Sum_probs=46.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccC--------------------CCCCChhhHHHHHHHHHHHhh-c-CcEEEEec
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWR--------------------DTIGRKTNFNQILEYVKDIRD-M-GMEVCCTL 179 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~--------------------~~~ge~~~~~~l~~~i~~ik~-~-g~~i~~t~ 179 (386)
+++++ ++.+.+.|++.|.+++++. ...| +.. .+.+.++++ . ++++..+-
T Consensus 193 ~~~e~----a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g-~~~----~~~l~~v~~~~~~ipvia~G 263 (332)
T 1vcf_A 193 LSREA----ALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIG-IPT----ARAILEVREVLPHLPLVASG 263 (332)
T ss_dssp CCHHH----HHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCS-CBH----HHHHHHHHHHCSSSCEEEES
T ss_pred CCHHH----HHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhcc-ccH----HHHHHHHHHhcCCCeEEEEC
Confidence 45655 4466778999988865432 1112 112 334444442 3 57888888
Q ss_pred CCCCHHHHHHHHHhccCeeeccc
Q 016599 180 GMLEKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 180 g~l~~e~l~~Lk~aG~~~v~i~l 202 (386)
|..+.+.+.+...+|++.|.++=
T Consensus 264 GI~~~~d~~kal~~GAd~V~igr 286 (332)
T 1vcf_A 264 GVYTGTDGAKALALGADLLAVAR 286 (332)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECG
T ss_pred CCCCHHHHHHHHHhCCChHhhhH
Confidence 98887777777778999998864
No 480
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=34.55 E-value=77 Score=30.20 Aligned_cols=24 Identities=13% Similarity=0.100 Sum_probs=13.1
Q ss_pred CHHHHHHHHHHHHH-cCCcEEEEec
Q 016599 123 TKDAVMQAAQKAKE-AGSTRFCMGA 146 (386)
Q Consensus 123 s~eeI~~~~~~~~~-~G~~~v~l~~ 146 (386)
+.++..+.++.+.+ .|+..+.+.+
T Consensus 262 ~~ed~~~la~~L~~~~Gvd~I~vs~ 286 (419)
T 3l5a_A 262 TIDEFNQLIDWVMDVSNIQYLAIAS 286 (419)
T ss_dssp CHHHHHHHHHHHHHHSCCCCEEECC
T ss_pred CHHHHHHHHHHHHhhcCCcEEEEee
Confidence 44555555555555 5555555544
No 481
>2dga_A Beta-glucosidase; alpha/beta barrel, hydrolase; 1.80A {Triticum aestivum} PDB: 3aiq_A* 3air_A* 3ais_A* 3aiu_A 3aiv_A* 3aiw_A*
Probab=34.49 E-value=70 Score=31.82 Aligned_cols=56 Identities=11% Similarity=0.084 Sum_probs=41.7
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeEeE
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s---~~~~l~~i~~a~~~Gi~v~~~~ 239 (386)
-+|.++.|+++|++.+-+++ +-.+++..=...-+ ++-.-+.|+.+++.||.+-+++
T Consensus 130 y~eDi~lm~~lG~~~~RfsI-sWsRI~P~g~g~~n~~Gl~~Y~~lid~l~~~GI~p~vtL 188 (565)
T 2dga_A 130 YEEDVKALKDMGMKVYRFSI-SWSRILPDGTGKVNQAGIDYYNKLINSLIDNDIVPYVTI 188 (565)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHCTTSSSSCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEecc-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 48889999999999999998 43555543211224 7777788999999999866654
No 482
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=34.37 E-value=29 Score=32.25 Aligned_cols=42 Identities=19% Similarity=0.228 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcCC
Q 016599 217 SYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATLP 261 (386)
Q Consensus 217 s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l~ 261 (386)
...+.++.+..++++|+.+..+.+ .|+.=-+...+++...++
T Consensus 272 Git~~~~i~~~a~~~gi~~~~~~~---~es~i~~aa~~hlaaa~p 313 (356)
T 3ro6_B 272 GLAPARRIATIAETAGIDLMWGCM---DESRISIAAALHAALACP 313 (356)
T ss_dssp SHHHHHHHHHHHHHHTCEEEECCC---SCCHHHHHHHHHHHHTCT
T ss_pred CHHHHHHHHHHHHHcCCEEEecCC---cccHHHHHHHHHHHhcCC
Confidence 578888999999999998766544 355545566677776663
No 483
>2qul_A D-tagatose 3-epimerase; beta/alpha barrel, isomerase; 1.79A {Pseudomonas cichorii} PDB: 2ou4_A 2qum_A* 2qun_A*
Probab=34.37 E-value=2.2e+02 Score=24.45 Aligned_cols=18 Identities=17% Similarity=0.086 Sum_probs=14.9
Q ss_pred CCCChhHHHHHHHHcCCC
Q 016599 342 PNNDFDADQLMFKVLGLT 359 (386)
Q Consensus 342 ~~~~~~~~~~~i~~~G~~ 359 (386)
+..+..+..+.+++.||.
T Consensus 223 G~id~~~~~~~L~~~gy~ 240 (290)
T 2qul_A 223 GRLPWDEIFGALKEIGYD 240 (290)
T ss_dssp SCSCHHHHHHHHHHTTCC
T ss_pred CCcCHHHHHHHHHHhCCC
Confidence 335889999999999985
No 484
>2e3z_A Beta-glucosidase; TIM barrel, glycoside hydrolase family 1, CLAN GH-A, structural genomics, NPPSFA; 1.50A {Phanerochaete chrysosporium} PDB: 2e40_A*
Probab=34.36 E-value=71 Score=30.93 Aligned_cols=57 Identities=16% Similarity=0.098 Sum_probs=42.2
Q ss_pred CCHHHHHHHHHhccCeeecccCchHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeEeE
Q 016599 182 LEKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 182 l~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~--~~~s---~~~~l~~i~~a~~~Gi~v~~~~ 239 (386)
.-+|.++.|+++|++.+.+++ +-.++...=. ..-+ ++-.-+.|+.+++.||.+-+++
T Consensus 63 ~y~eDi~lm~~~G~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~y~~lid~l~~~GI~p~vtL 124 (465)
T 2e3z_A 63 RWREDVQLLKSYGVKAYRFSL-SWSRIIPKGGRSDPVNGAGIKHYRTLIEELVKEGITPFVTL 124 (465)
T ss_dssp THHHHHHHHHHTTCSEEEEEC-CHHHHSTTCSTTSCCCHHHHHHHHHHHHHHHHHTCEEEEEE
T ss_pred HhHHHHHHHHHhCCCceeccc-chHHhcCCCCcCCCcCHHHHHHHHHHHHHHHHcCCEEEEEe
Confidence 358889999999999999998 4355555421 1224 6677788999999999866554
No 485
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=34.31 E-value=1.5e+02 Score=26.98 Aligned_cols=83 Identities=19% Similarity=0.259 Sum_probs=47.9
Q ss_pred CCCCHHHHHHHH-------HHHHHcCCcEEEEeccc---------------CCCCCCh--hhHHHHHHHHHHHhhc-CcE
Q 016599 120 KLMTKDAVMQAA-------QKAKEAGSTRFCMGAAW---------------RDTIGRK--TNFNQILEYVKDIRDM-GME 174 (386)
Q Consensus 120 ~~~s~eeI~~~~-------~~~~~~G~~~v~l~~g~---------------~~~~ge~--~~~~~l~~~i~~ik~~-g~~ 174 (386)
+.|+.+||.+.+ +.+.+.|++.|-|-++. .+-+|.. .....++++++++++. .+.
T Consensus 132 ~~mt~~eI~~~i~~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGGslenr~r~~~eiv~avr~~v~~p 211 (338)
T 1z41_A 132 VEMSAEKVKETVQEFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGGSPENRYRFLREIIDEVKQVWDGP 211 (338)
T ss_dssp EECCHHHHHHHHHHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHCCSC
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCcchhhhHHHHHHHHHHHHHHcCCc
Confidence 458888875544 34456799988775431 0112221 1234578888888743 444
Q ss_pred EE--Eec------CCC---CHHHHHHHHHhccCeeeccc
Q 016599 175 VC--CTL------GML---EKHQAIELKKAGLTAYNHNL 202 (386)
Q Consensus 175 i~--~t~------g~l---~~e~l~~Lk~aG~~~v~i~l 202 (386)
+. ++. |.- ..+.++.|.++|++.+.++-
T Consensus 212 v~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 212 LFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp EEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 32 232 221 23567778888999988753
No 486
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=34.27 E-value=98 Score=27.27 Aligned_cols=42 Identities=10% Similarity=0.178 Sum_probs=28.9
Q ss_pred HHHHHHHHHhhc-CcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 160 QILEYVKDIRDM-GMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 160 ~l~~~i~~ik~~-g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
...+.++.+++. ++++.+..|..+.+.+.....+|.|.+-++
T Consensus 192 ~~~~~i~~lr~~~~~pi~vggGI~t~e~~~~~~~agAD~vVVG 234 (268)
T 1qop_A 192 PLHHLIEKLKEYHAAPALQGFGISSPEQVSAAVRAGAAGAISG 234 (268)
T ss_dssp CCHHHHHHHHHTTCCCEEEESSCCSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHhccCCcEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 345566666643 566777777777888888777788877765
No 487
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=34.27 E-value=2.6e+02 Score=25.11 Aligned_cols=70 Identities=11% Similarity=0.077 Sum_probs=38.3
Q ss_pred HHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCC-----CCHHHH----HHHHHhccCeeecc
Q 016599 131 AQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGM-----LEKHQA----IELKKAGLTAYNHN 201 (386)
Q Consensus 131 ~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~-----l~~e~l----~~Lk~aG~~~v~i~ 201 (386)
++++.+.|++.|.+..-.. ...+...++++.++++..++.|+.+.+.... .+++.+ +.-.++|.|.|-.+
T Consensus 131 ve~Av~~GAdaV~~~i~~G-s~~~~~~l~~i~~v~~~a~~~GlpvIie~~~G~~~~~d~e~i~~aariA~elGAD~VKt~ 209 (295)
T 3glc_A 131 MDDAVRLNSCAVAAQVYIG-SEYEHQSIKNIIQLVDAGMKVGMPTMAVTGVGKDMVRDQRYFSLATRIAAEMGAQIIKTY 209 (295)
T ss_dssp HHHHHHTTCSEEEEEECTT-STTHHHHHHHHHHHHHHHHTTTCCEEEEECC----CCSHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHCCCCEEEEEEECC-CCcHHHHHHHHHHHHHHHHHcCCEEEEECCCCCccCCCHHHHHHHHHHHHHhCCCEEEeC
Confidence 3445568988886643111 1112234455666666666778775443221 355533 33357799987765
No 488
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=34.25 E-value=1.2e+02 Score=27.59 Aligned_cols=66 Identities=17% Similarity=0.205 Sum_probs=41.6
Q ss_pred HHHHHcCCcEEEEecccCC-CCCChhhHHHHHHHHHHHh-hcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 132 QKAKEAGSTRFCMGAAWRD-TIGRKTNFNQILEYVKDIR-DMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 132 ~~~~~~G~~~v~l~~g~~~-~~ge~~~~~~l~~~i~~ik-~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
+.+.+.|++.|.+.+.... ..|....+ +++..++ ..++++...-|..+.+.+..+..+|.+.+.++
T Consensus 138 ~~a~~~GaD~i~v~g~~~GG~~G~~~~~----~ll~~i~~~~~iPviaaGGI~~~~dv~~al~~GA~gV~vG 205 (326)
T 3bo9_A 138 RMVERAGADAVIAEGMESGGHIGEVTTF----VLVNKVSRSVNIPVIAAGGIADGRGMAAAFALGAEAVQMG 205 (326)
T ss_dssp HHHHHTTCSCEEEECTTSSEECCSSCHH----HHHHHHHHHCSSCEEEESSCCSHHHHHHHHHHTCSEEEES
T ss_pred HHHHHcCCCEEEEECCCCCccCCCccHH----HHHHHHHHHcCCCEEEECCCCCHHHHHHHHHhCCCEEEec
Confidence 3455678888888652110 01222222 4444444 34678888888887888888888999988875
No 489
>1lt8_A Betaine-homocysteine methyltransferase; homocysteine metabolism, homocysteinemia, zinc, thiol alkyl transfer; HET: CBH CIT; 2.05A {Homo sapiens} SCOP: c.1.26.1 PDB: 1lt7_A* 1umy_A
Probab=34.17 E-value=1.1e+02 Score=29.14 Aligned_cols=12 Identities=0% Similarity=-0.044 Sum_probs=6.7
Q ss_pred HHHHHHHHHHHh
Q 016599 247 EEDRVGLLHTLA 258 (386)
Q Consensus 247 ~ed~~~~l~~l~ 258 (386)
.+++..+++.+.
T Consensus 221 P~~~~~~l~~l~ 232 (406)
T 1lt8_A 221 PTISLKTVKLMK 232 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 555555555554
No 490
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=34.14 E-value=63 Score=29.96 Aligned_cols=128 Identities=10% Similarity=0.113 Sum_probs=67.0
Q ss_pred CCHHHHHHHHHHHHH-cCCc-EEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEE-EEecCCCCHHHHHHHHHhccCee
Q 016599 122 MTKDAVMQAAQKAKE-AGST-RFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEV-CCTLGMLEKHQAIELKKAGLTAY 198 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~-~G~~-~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i-~~t~g~l~~e~l~~Lk~aG~~~v 198 (386)
.++++-++.++.+.+ .|-+ .+.+-. + .....+...++++.+.+.++.. .-....-+.+.+++|++.- .+
T Consensus 169 ~~~~~d~~~v~avr~~~g~~~~l~vDa--N----~~~~~~~A~~~~~~l~~~~~~~iEeP~~~~d~~~~~~l~~~~--~i 240 (370)
T 2chr_A 169 RSPQDDLIHMEALSNSLGSKAYLRVDV--N----QAWDEQVASVYIPELEALGVELIEQPVGRENTQALRRLSDNN--RV 240 (370)
T ss_dssp SCHHHHHHHHHHHHHHTTTTSEEEEEC--T----TCCCTHHHHHHHHHHHTTTCCEEECCSCSSCHHHHHHHHHHC--SS
T ss_pred CChHHHHHHHHHHHHhcCCCcEEEecC--C----CCCCHHHHHHHHHHHHhcCCceecCCCChhhhhhhhHHhhhc--cC
Confidence 356665666666554 3433 232321 1 1133466777777777776652 2222334567777777653 23
Q ss_pred eccc-C---chHHHHhhhCC------------CCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 199 NHNL-D---TSREFYSKIIT------------TRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 199 ~i~l-e---~~~~~~~~i~~------------~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
++.. | +..+..+.+.. -....+.++..+.+.+.|+.+..+.++ ++.=-....+++...+
T Consensus 241 pIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~~ia~~A~~~gi~~~~~~~~---~~~i~~aa~~hlaa~~ 315 (370)
T 2chr_A 241 AIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGIASYGGTML---DSTIGTSVALQLYSTV 315 (370)
T ss_dssp EEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHHHHHHHHHHHTCEECCCCCS---CCHHHHHHHHHHHTTS
T ss_pred CccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHHHHHHHHHHcCCeEEeCCCc---ccHHHHHHHHHHHHhC
Confidence 3322 2 22233333321 124677888888899999876544333 3433344555665554
No 491
>1e4i_A Beta-glucosidase; hydrolase, family 1 glycosyl hydrolase, covalent enzyme-GLYC intermediate, alpha/beta barrel; HET: G2F NFG; 2.00A {Bacillus polymyxa} SCOP: c.1.8.4 PDB: 1tr1_A 1bgg_A* 1bga_A 1uyq_A*
Probab=34.11 E-value=77 Score=30.49 Aligned_cols=57 Identities=11% Similarity=0.125 Sum_probs=41.8
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhCCCCC---HHHHHHHHHHHHHcCCeeeEeEE
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKIITTRS---YDERLETLKHVREAGINVCSGGI 240 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~~~~s---~~~~l~~i~~a~~~Gi~v~~~~i 240 (386)
-+|.++.|+++|++.+-+++ +-.++...=...-+ ++-.-+.|+.+++.||.+-+++.
T Consensus 60 y~eDi~lm~~~G~~~~R~si-~W~Ri~P~G~g~~n~~Gl~~y~~lid~l~~~GI~p~vtL~ 119 (447)
T 1e4i_A 60 YEEDIRLMKELGIRTYRFSV-SWPRIFPNGDGEVNQKGLDYYHRVVDLLNDNGIEPFCTLY 119 (447)
T ss_dssp HHHHHHHHHHHTCSEEEEEC-CHHHHSTTSSSCCCHHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred cHHHHHHHHHcCCCeEEecC-cHHHhccCCCCCcCHHHHHHHHHHHHHHHHcCCEEEEEeC
Confidence 47889999999999999998 33555543111224 66777889999999998766654
No 492
>1v02_A Dhurrinase, dhurrinase-1; beta-glucosidase, dhurrin hydrolysis, PEST defense, family GH1, hydrolase; 1.9A {Sorghum bicolor} SCOP: c.1.8.4 PDB: 1v02_E 1v03_A*
Probab=33.83 E-value=76 Score=31.57 Aligned_cols=56 Identities=16% Similarity=0.109 Sum_probs=42.1
Q ss_pred CHHHHHHHHHhccCeeecccCchHHHHhhhC--CCCC---HHHHHHHHHHHHHcCCeeeEeE
Q 016599 183 EKHQAIELKKAGLTAYNHNLDTSREFYSKII--TTRS---YDERLETLKHVREAGINVCSGG 239 (386)
Q Consensus 183 ~~e~l~~Lk~aG~~~v~i~le~~~~~~~~i~--~~~s---~~~~l~~i~~a~~~Gi~v~~~~ 239 (386)
-+|.++.|+++|++.+-+++ +-.+++..=. ..-+ ++-.-+.|+.+++.||..-+++
T Consensus 132 y~eDi~lm~~lG~~~~R~si-sWsRi~P~g~~~g~~n~~G~~~Y~~lid~l~~~GI~p~vtL 192 (565)
T 1v02_A 132 YAEDVRLLKEMGMDAYRFSI-SWPRILPKGTLAGGINEKRVEYYNKLIDLLLENGIEPYITI 192 (565)
T ss_dssp HHHHHHHHHHTTCSEEEEEC-CHHHHSTTSSSTTCCCHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHhCCCeEEccc-CHHHhCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 48889999999999999998 4365555421 1224 7777788999999999866554
No 493
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=33.81 E-value=14 Score=31.64 Aligned_cols=40 Identities=13% Similarity=0.233 Sum_probs=24.7
Q ss_pred HHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHhccCeeecc
Q 016599 161 ILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKAGLTAYNHN 201 (386)
Q Consensus 161 l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~aG~~~v~i~ 201 (386)
.++.+++++..++++.+..|. +.+.+..+.++|.+.+-++
T Consensus 155 ~l~~i~~~~~~~~pi~v~GGI-~~~~~~~~~~aGAd~vvvG 194 (218)
T 3jr2_A 155 DLDKMRQLSALGIELSITGGI-VPEDIYLFEGIKTKTFIAG 194 (218)
T ss_dssp HHHHHHHHHHTTCEEEEESSC-CGGGGGGGTTSCEEEEEES
T ss_pred HHHHHHHHhCCCCCEEEECCC-CHHHHHHHHHcCCCEEEEc
Confidence 344444444445666666665 5666777777777777664
No 494
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=33.68 E-value=2.7e+02 Score=25.12 Aligned_cols=108 Identities=11% Similarity=-0.031 Sum_probs=65.3
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCCh--hhHHHHHHHHHHHhh---cCcEEEEecCC-CCHHHHH---HHHH
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRK--TNFNQILEYVKDIRD---MGMEVCCTLGM-LEKHQAI---ELKK 192 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~--~~~~~l~~~i~~ik~---~g~~i~~t~g~-l~~e~l~---~Lk~ 192 (386)
++.+.+.+.++.+.+.|++.+++.|.. ||- +..++-.++++.+.+ -.+++....|. .+.+.++ ..++
T Consensus 42 iD~~~l~~lv~~li~~Gv~Gi~v~GtT----GE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg~~~t~~ai~la~~A~~ 117 (315)
T 3na8_A 42 LDLPALGRSIERLIDGGVHAIAPLGST----GEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVSDLTTAKTVRRAQFAES 117 (315)
T ss_dssp BCHHHHHHHHHHHHHTTCSEEECSSGG----GTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccc----cChhhCCHHHHHHHHHHHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHh
Confidence 789999999999999999998775432 332 334555555555543 23565555553 4455544 4456
Q ss_pred hccCeeecccCchHHHHhhhCCCCCHHHHHHHHHHHHH-cCCeeeEeEEe
Q 016599 193 AGLTAYNHNLDTSREFYSKIITTRSYDERLETLKHVRE-AGINVCSGGII 241 (386)
Q Consensus 193 aG~~~v~i~le~~~~~~~~i~~~~s~~~~l~~i~~a~~-~Gi~v~~~~i~ 241 (386)
+|+|.+.+-.-.+ . +.+.+..++-.+.+.+ .++++-..-+.
T Consensus 118 ~Gadavlv~~P~y-------~-~~s~~~l~~~f~~va~a~~lPiilYn~P 159 (315)
T 3na8_A 118 LGAEAVMVLPISY-------W-KLNEAEVFQHYRAVGEAIGVPVMLYNNP 159 (315)
T ss_dssp TTCSEEEECCCCS-------S-CCCHHHHHHHHHHHHHHCSSCEEEEECH
T ss_pred cCCCEEEECCCCC-------C-CCCHHHHHHHHHHHHHhCCCcEEEEeCc
Confidence 6999887633221 1 1255666666666554 47775544433
No 495
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=33.65 E-value=2.2e+02 Score=26.14 Aligned_cols=75 Identities=12% Similarity=0.103 Sum_probs=48.0
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCC--C------CCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHHHh
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRD--T------IGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELKKA 193 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~--~------~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk~a 193 (386)
.+.++ ++.+.+.|++-|.++.++.. + .+.| ...-+.++.+..+..++++...-|..+...+.+...+
T Consensus 170 ~t~e~----A~~a~~aGaD~I~v~~g~G~~~~~r~~~g~~~p-~~~~l~~v~~~~~~~~ipvIa~GGI~~g~di~kAlal 244 (351)
T 2c6q_A 170 VTGEM----VEELILSGADIIKVGIGPGSVCTTRKKTGVGYP-QLSAVMECADAAHGLKGHIISDGGCSCPGDVAKAFGA 244 (351)
T ss_dssp CSHHH----HHHHHHTTCSEEEECSSCSTTBCHHHHHCBCCC-HHHHHHHHHHHHHHTTCEEEEESCCCSHHHHHHHHHT
T ss_pred CCHHH----HHHHHHhCCCEEEECCCCCcCcCccccCCCCcc-HHHHHHHHHHHHhhcCCcEEEeCCCCCHHHHHHHHHc
Confidence 45544 34566789988866432110 0 0111 2344555555545567888888899988888888889
Q ss_pred ccCeeecc
Q 016599 194 GLTAYNHN 201 (386)
Q Consensus 194 G~~~v~i~ 201 (386)
|.+.+.++
T Consensus 245 GA~~V~vG 252 (351)
T 2c6q_A 245 GADFVMLG 252 (351)
T ss_dssp TCSEEEES
T ss_pred CCCceecc
Confidence 99999875
No 496
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=33.61 E-value=1.2e+02 Score=26.99 Aligned_cols=96 Identities=9% Similarity=0.033 Sum_probs=55.1
Q ss_pred hhHHHHHHHHHHHhhcCcEEEE---ecC---CCCHHHHHHHHHhcc----CeeecccCchHHHHhhhCCCCCHHHHHHHH
Q 016599 156 TNFNQILEYVKDIRDMGMEVCC---TLG---MLEKHQAIELKKAGL----TAYNHNLDTSREFYSKIITTRSYDERLETL 225 (386)
Q Consensus 156 ~~~~~l~~~i~~ik~~g~~i~~---t~g---~l~~e~l~~Lk~aG~----~~v~i~le~~~~~~~~i~~~~s~~~~l~~i 225 (386)
.+++.+.++++.+-+.|+...+ |.| .++.+.-+++.+.-+ .++.+=+- ....+.++.++..
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~G---------vg~~~t~~ai~la 89 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAG---------TGSNNTAASIAMS 89 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE---------CCCSSHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEe---------CCcccHHHHHHHH
Confidence 6778888888887777776333 333 256554444433211 12221000 0234778888888
Q ss_pred HHHHHcCCeee-EeEEeecCCCHHHHHHHHHHHhcC
Q 016599 226 KHVREAGINVC-SGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 226 ~~a~~~Gi~v~-~~~i~Glget~ed~~~~l~~l~~l 260 (386)
+.+.++|..-- +...+-..-+.+++.++++.+.+-
T Consensus 90 ~~a~~~Gadavlv~~P~y~~~s~~~l~~~f~~ia~a 125 (291)
T 3a5f_A 90 KWAESIGVDGLLVITPYYNKTTQKGLVKHFKAVSDA 125 (291)
T ss_dssp HHHHHTTCSEEEEECCCSSCCCHHHHHHHC-CTGGG
T ss_pred HHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 99999998622 222222245888888888777553
No 497
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=33.61 E-value=1.5e+02 Score=30.43 Aligned_cols=116 Identities=13% Similarity=0.098 Sum_probs=64.2
Q ss_pred CCHHHHHHHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhh-c-CcE--EEEec--CCCCHHHHHHHHHhcc
Q 016599 122 MTKDAVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRD-M-GME--VCCTL--GMLEKHQAIELKKAGL 195 (386)
Q Consensus 122 ~s~eeI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~-~-g~~--i~~t~--g~l~~e~l~~Lk~aG~ 195 (386)
.+++.+++.++.+.+.|+..|+|.- +.|- ..-..+.++++.+++ . ++. ++++| |+-....+..+ ++|+
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~D----T~G~-~~P~~v~~lV~~lk~~~p~~~I~~H~Hnd~GlAvANslaAv-eAGa 331 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKD----MAGL-LKPTACTMLVSSLRDRFPDLPLHIHTHDTSGAGVAAMLACA-QAGA 331 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEEC----TTSC-CCHHHHHHHHHHHHHHSTTCCEEEECCCTTSCHHHHHHHHH-HTTC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcC----cCCC-cCHHHHHHHHHHHHHhCCCCeEEEEECCCccHHHHHHHHHH-HhCC
Confidence 3688888888888888988888741 2221 222455666666653 2 233 34433 44444445444 6899
Q ss_pred CeeecccCch-HHHHhhhCCCCCHHHHHHHHHHHHHcCCeeeEeEEeecCCCHHHHHHHHHHHhc
Q 016599 196 TAYNHNLDTS-REFYSKIITTRSYDERLETLKHVREAGINVCSGGIIGLGEAEEDRVGLLHTLAT 259 (386)
Q Consensus 196 ~~v~i~le~~-~~~~~~i~~~~s~~~~l~~i~~a~~~Gi~v~~~~i~Glget~ed~~~~l~~l~~ 259 (386)
+.|..++.++ .. ...-+.+.++.+++ ..|+.+ |-+.+.+.+..+++.+
T Consensus 332 ~~VD~ti~GlGer-----tGN~~lE~vv~~L~---~~g~~t--------gidl~~L~~~s~~v~~ 380 (718)
T 3bg3_A 332 DVVDVAADSMSGM-----TSQPSMGALVACTR---GTPLDT--------EVPMERVFDYSEYWEG 380 (718)
T ss_dssp SEEEEBCGGGCST-----TSCCBHHHHHHHHT---TSTTCC--------CCCHHHHHHHHHHHHH
T ss_pred CEEEecCcccccc-----cCchhHHHHHHHHH---hcCCCc--------ccCHHHHHHHHHHHHH
Confidence 9888877765 31 11225665554443 335432 3345555555554443
No 498
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=33.42 E-value=77 Score=28.82 Aligned_cols=96 Identities=16% Similarity=0.070 Sum_probs=57.4
Q ss_pred hhhHHHHHHHHHHHhhcCcEEE---EecCC---CCHHHHHHHHHhcc----CeeecccCchHHHHhhhCCCCCHHHHHHH
Q 016599 155 KTNFNQILEYVKDIRDMGMEVC---CTLGM---LEKHQAIELKKAGL----TAYNHNLDTSREFYSKIITTRSYDERLET 224 (386)
Q Consensus 155 ~~~~~~l~~~i~~ik~~g~~i~---~t~g~---l~~e~l~~Lk~aG~----~~v~i~le~~~~~~~~i~~~~s~~~~l~~ 224 (386)
..+++.+.++++.+-+.|+... -|.|. ++.+.-+++.+.-+ .++.+=+ .+ +.+.++.++.
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpVia--------Gv--g~~t~~ai~l 98 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVA--------GI--GYATSTAIEL 98 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE--------EE--CSSHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEE--------Ee--CcCHHHHHHH
Confidence 3678888888888877777633 23332 55554444433211 2232211 11 2378888888
Q ss_pred HHHHHHcCCe-eeEeEEeecCCCHHHHHHHHHHHhcC
Q 016599 225 LKHVREAGIN-VCSGGIIGLGEAEEDRVGLLHTLATL 260 (386)
Q Consensus 225 i~~a~~~Gi~-v~~~~i~Glget~ed~~~~l~~l~~l 260 (386)
.+.+.++|.. +-+..-+-..-+.+++.++++.+.+-
T Consensus 99 a~~A~~~Gadavlv~~P~y~~~s~~~l~~~f~~va~a 135 (316)
T 3e96_A 99 GNAAKAAGADAVMIHMPIHPYVTAGGVYAYFRDIIEA 135 (316)
T ss_dssp HHHHHHHTCSEEEECCCCCSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCEEEEcCCCCCCCCHHHHHHHHHHHHHh
Confidence 8899999986 22222222245889999998888653
No 499
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=33.39 E-value=1.5e+02 Score=26.54 Aligned_cols=71 Identities=11% Similarity=0.145 Sum_probs=43.6
Q ss_pred HHHHHHHHcCCcEEEEecccCCCCCChhhHHHHHHHHHHHhhcCcEEEEecCCCCHHHHHHHH-HhccCeeecccCc
Q 016599 129 QAAQKAKEAGSTRFCMGAAWRDTIGRKTNFNQILEYVKDIRDMGMEVCCTLGMLEKHQAIELK-KAGLTAYNHNLDT 204 (386)
Q Consensus 129 ~~~~~~~~~G~~~v~l~~g~~~~~ge~~~~~~l~~~i~~ik~~g~~i~~t~g~l~~e~l~~Lk-~aG~~~v~i~le~ 204 (386)
+.++.+.++|+++|...|+ .++. +...+.+.++++.... .+++..-.| ++.+.+..+. .+|++.+..+...
T Consensus 170 ~Ale~Li~lGvdrILTSG~-~~~a--~~Gl~~Lk~Lv~~a~~-rI~ImaGGG-V~~~Ni~~l~~~tG~~~~H~S~~~ 241 (287)
T 3iwp_A 170 AALETLLTLGFERVLTSGC-DSSA--LEGLPLIKRLIEQAKG-RIVVMPGGG-ITDRNLQRILEGSGATEFHCSARS 241 (287)
T ss_dssp HHHHHHHHHTCSEEEECTT-SSST--TTTHHHHHHHHHHHTT-SSEEEECTT-CCTTTHHHHHHHHCCSEEEECCEE
T ss_pred HHHHHHHHcCCCEEECCCC-CCCh--HHhHHHHHHHHHHhCC-CCEEEECCC-cCHHHHHHHHHhhCCCEEeECcCc
Confidence 3445556669988865543 3322 3456677777665433 366655555 5566666665 4899999887644
No 500
>2qw5_A Xylose isomerase-like TIM barrel; putative sugar phosphate isomerase/epimerase; 1.78A {Anabaena variabilis atcc 29413}
Probab=33.26 E-value=2.6e+02 Score=24.88 Aligned_cols=47 Identities=15% Similarity=0.164 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCcEEEEecccCCCCCChhh--HHHHHHHHHHHhhcCcE
Q 016599 126 AVMQAAQKAKEAGSTRFCMGAAWRDTIGRKTN--FNQILEYVKDIRDMGME 174 (386)
Q Consensus 126 eI~~~~~~~~~~G~~~v~l~~g~~~~~ge~~~--~~~l~~~i~~ik~~g~~ 174 (386)
.+.+.++.+.+.|++.|-+..... ...+.. ...+.++-+.+++.|+.
T Consensus 32 ~~~~~l~~~~~~G~~~vEl~~~~~--~~~~~~~~~~~~~~l~~~l~~~gL~ 80 (335)
T 2qw5_A 32 IVVAHIKKLQRFGYSGFEFPIAPG--LPENYAQDLENYTNLRHYLDSEGLE 80 (335)
T ss_dssp HHHHHHHHHHHTTCCEEEEECCCC--CGGGHHHHHHHHHHHHHHHHHTTCT
T ss_pred hHHHHHHHHHHhCCCEEEEecCCC--cccccccchHHHHHHHHHHHHCCCC
Confidence 444566677788999988864321 111111 13344444455677887
Done!