Query 016600
Match_columns 386
No_of_seqs 230 out of 1303
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 16:17:58 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016600.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016600hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 5.9E-48 2E-52 384.9 19.1 296 12-311 54-410 (413)
2 3aup_A SBG7S, BG, basic 7S glo 100.0 2.7E-45 9.3E-50 364.9 22.3 294 11-313 54-400 (403)
3 1tzs_A Cathepsin E; hydrolase, 100.0 5.8E-45 2E-49 356.2 23.1 264 3-310 61-346 (351)
4 1t6e_X Xylanase inhibitor; two 100.0 4.8E-45 1.6E-49 360.6 22.0 284 15-307 43-374 (381)
5 1mpp_A Pepsin; hydrolase(acid 100.0 1E-44 3.5E-49 355.6 22.9 271 3-311 57-360 (361)
6 3fv3_A SAPP1P-secreted asparti 100.0 3.2E-44 1.1E-48 349.1 21.1 264 3-318 53-339 (339)
7 1j71_A Candidapepsin, aspartic 100.0 2.5E-44 8.4E-49 349.4 19.6 254 3-311 59-329 (334)
8 2x0b_A Renin; hydrolase-hormon 100.0 1.5E-44 5E-49 356.9 17.7 258 4-306 102-383 (383)
9 1am5_A Pepsin, acid proteinase 100.0 4.6E-44 1.6E-48 346.0 20.8 255 4-306 51-324 (324)
10 2qzx_A Candidapepsin-5; aspart 100.0 4.2E-44 1.4E-48 348.8 19.7 264 3-318 59-341 (342)
11 2qp8_A Beta-secretase 1; BACE1 100.0 9.2E-44 3.2E-48 353.0 21.7 285 5-321 57-382 (395)
12 1dpj_A Proteinase A; proteinas 100.0 3.6E-44 1.2E-48 347.5 17.9 256 4-306 52-329 (329)
13 3vf3_A Beta-secretase 1; struc 100.0 1.2E-43 4E-48 352.9 21.8 287 4-321 63-389 (402)
14 2ewy_A Beta-secretase 2; BACE2 100.0 6.5E-44 2.2E-48 352.6 19.0 286 5-321 49-370 (383)
15 3pvk_A Candidapepsin-2; hydrol 100.0 9.7E-44 3.3E-48 346.0 19.6 265 3-318 59-341 (342)
16 2apr_A Rhizopuspepsin; hydrola 100.0 1.1E-43 3.7E-48 343.6 19.7 256 4-306 53-324 (325)
17 1htr_B Gastricsin; aspartyl pr 100.0 5.8E-44 2E-48 346.0 17.7 256 4-306 51-329 (329)
18 3c9x_A Trichoderma reesei aspa 100.0 2.5E-43 8.5E-48 341.7 21.4 260 4-305 54-329 (329)
19 3lpj_A Beta-secretase 1; alzhe 100.0 1.8E-43 6E-48 357.1 20.9 288 4-321 109-435 (455)
20 3psg_A Pepsinogen; hydrolase(a 100.0 1.1E-43 3.6E-48 349.5 18.5 257 3-306 94-370 (370)
21 3cms_A Chymosin B; hydrolase, 100.0 1.4E-43 4.9E-48 342.5 18.8 256 4-306 53-323 (323)
22 4aa9_A Chymosin; hydrolase, as 100.0 1.3E-43 4.5E-48 342.1 16.7 256 4-306 50-320 (320)
23 1ibq_A Aspergillopepsin; aspar 100.0 6.7E-43 2.3E-47 338.1 19.9 259 4-305 51-324 (325)
24 1oew_A Endothiapepsin; hydrola 100.0 4.8E-43 1.6E-47 339.7 18.7 259 5-305 54-329 (329)
25 1yg9_A Aspartic protease BLA G 100.0 2.8E-43 9.6E-48 341.5 17.0 254 4-306 56-329 (330)
26 3k1w_A Renin; protease, altern 100.0 1.8E-43 6.1E-48 344.0 15.3 258 4-306 59-340 (341)
27 1miq_A Plasmepsin; aspartic pr 100.0 9.1E-43 3.1E-47 343.5 18.9 255 3-306 100-374 (375)
28 1qdm_A Prophytepsin; aspartic 100.0 7E-43 2.4E-47 353.9 18.0 270 3-305 91-477 (478)
29 1izd_A Aspartic proteinase; su 100.0 1.7E-42 6E-47 334.9 19.1 256 4-305 52-322 (323)
30 1wkr_A Polyporopepsin; hydrola 100.0 2E-41 6.7E-46 329.7 20.9 247 39-311 56-338 (340)
31 2bju_A Plasmepsin II; aspartic 100.0 3.5E-42 1.2E-46 345.9 15.6 256 3-306 176-450 (453)
32 1bxo_A Protein (penicillopepsi 100.0 3.7E-42 1.3E-46 332.6 14.3 240 38-305 67-322 (323)
33 3qvc_A Histo-aspartic protease 100.0 2.2E-41 7.4E-46 340.3 15.9 255 3-306 175-449 (451)
34 1lya_B Cathepsin D; lysosomal 100.0 1.6E-37 5.3E-42 287.9 19.7 217 75-306 3-241 (241)
35 1b5f_A Protein (cardosin A); h 100.0 8.4E-29 2.9E-33 229.1 15.3 172 4-207 53-237 (239)
36 1b5f_B Protein (cardosin A); h 99.6 8E-17 2.7E-21 125.1 3.8 77 229-306 6-87 (87)
37 1lya_A Cathepsin D; lysosomal 98.1 1.1E-06 3.6E-11 69.0 3.4 43 5-67 55-97 (97)
38 3s8i_A Protein DDI1 homolog 1; 94.3 0.036 1.2E-06 46.4 4.2 38 269-306 99-136 (148)
39 2i1a_A DNA damage-inducible pr 92.9 0.3 1E-05 40.3 7.5 27 277-303 108-134 (148)
40 1lya_A Cathepsin D; lysosomal 49.5 12 0.00041 28.2 3.1 32 160-197 13-44 (97)
41 1ibq_A Aspergillopepsin; aspar 37.0 28 0.00095 32.1 4.1 30 160-197 14-43 (325)
42 1bxo_A Protein (penicillopepsi 34.4 29 0.00099 31.9 3.8 30 160-197 15-44 (323)
43 1izd_A Aspartic proteinase; su 32.2 34 0.0012 31.5 3.9 31 159-197 14-44 (323)
44 3aup_A SBG7S, BG, basic 7S glo 25.6 59 0.002 30.9 4.4 42 149-197 11-52 (403)
45 3c9x_A Trichoderma reesei aspa 24.3 70 0.0024 29.4 4.5 32 160-197 15-46 (329)
46 3vla_A EDGP; extracellular, in 23.9 63 0.0021 31.0 4.2 42 149-197 10-51 (413)
47 1oew_A Endothiapepsin; hydrola 22.8 77 0.0026 29.0 4.5 32 160-197 15-46 (329)
48 2apr_A Rhizopuspepsin; hydrola 22.3 70 0.0024 29.3 4.1 32 160-197 15-46 (325)
49 1b5f_A Protein (cardosin A); h 21.5 57 0.002 28.5 3.1 32 160-197 13-44 (239)
50 1yg9_A Aspartic protease BLA G 20.5 47 0.0016 30.6 2.4 29 161-197 18-46 (330)
51 1t6e_X Xylanase inhibitor; two 20.3 83 0.0028 29.5 4.2 27 159-196 13-39 (381)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=5.9e-48 Score=384.87 Aligned_cols=296 Identities=21% Similarity=0.364 Sum_probs=233.5
Q ss_pred CCCCCCccccCCCcCCCCCC--CC---CC------CCCCCceeeecC-CCCceEeEEEEEEEEEeecCCCCccc-ccccc
Q 016600 12 SASSTSKHLSCSHRLCDLGT--SC---QN------PKQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNALK-NSVQA 78 (386)
Q Consensus 12 ~~SsT~~~~~C~~~~C~~~~--~C---~~------~~~~c~~~i~Y~-~g~s~~~G~~~~D~v~l~~~~~~~~~-~~~~~ 78 (386)
.+|+||+.++|.+..|.... +| .. .++.|.|.+.|+ ++ +.++|++++|+|+|++.+....+ ...+.
T Consensus 54 ~~Sst~~~v~C~s~~C~~~~~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~ 132 (413)
T 3vla_A 54 YVSSTYRPVRCRTSQCSLSGSIACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVP 132 (413)
T ss_dssp CCCTTCEECBTTSHHHHHTTCCEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEE
T ss_pred CCCCCcCccCCCcccccccccCCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeC
Confidence 57999999999999997642 23 11 135699999994 65 78999999999999854221100 13557
Q ss_pred cEEEeeeeeccCCCCCCCCCceEEecCCCCCChHHHHHhcCCCCCeEEEeecCC--CCceEEECCCCCC---------C-
Q 016600 79 SVIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPA---------T- 146 (386)
Q Consensus 79 ~~~fg~~~~~~g~~~~~~~~dGIlGLg~~~~S~~~~L~~~glI~~~FSl~l~~~--~~G~i~fGg~d~~---------~- 146 (386)
++.|||++++.+.... ..+|||||||++.+|++.||+++++|+++||+||.+. ..|+|+||+.|.. .
T Consensus 133 ~~~FGc~~~~~~~g~~-~~~dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~ 211 (413)
T 3vla_A 133 RFIFSCAPTSLLQNLA-SGVVGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKT 211 (413)
T ss_dssp EEEEEEECGGGGTTSC-TTCCEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTT
T ss_pred CEEEECcccccccCcc-cccccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCc
Confidence 8999999987322111 2579999999999999999999988899999999973 4799999999852 3
Q ss_pred CeeeeeeecCCc----------ceeEEEEEeEEEEcCeeecCC----------CceEEEeccccceeeCHHHHHHHHHHH
Q 016600 147 QQSTSFLASNGK----------YITYIIGVETCCIGSSCLKQT----------SFKAIVDSGSSFTFLPKEVYETIAAEF 206 (386)
Q Consensus 147 ~~~~p~v~~~~~----------~~~y~V~l~~i~v~~~~~~~~----------~~~~iiDSGTt~~~lP~~~~~~l~~~i 206 (386)
+.|+|++..+.. ..+|.|+|++|.||++.+... ..++||||||++++||+++|++|.++|
T Consensus 212 l~~tPl~~~~~~~~~~~~~~~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~ 291 (413)
T 3vla_A 212 LTYTPLLTNPVSTSATSTQGEPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAF 291 (413)
T ss_dssp SEEEECBCCSSCCSSSCCTTCCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHH
T ss_pred eeEeecccCCccccccccccCCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHH
Confidence 789999876432 269999999999999988632 357999999999999999999999999
Q ss_pred HHhccccc--ccccccccccccccccCC----CCCCCeEEEEEcC-CceeeecCCeEEEEeecceeeEEEEEEccC---C
Q 016600 207 DRQVNDTI--TSFEGYPWKCCYKSSSQR----LPKLPSVKLMFPQ-NNSFVVNNPVFVIYGTQVVTGFCLAIQPVD---G 276 (386)
Q Consensus 207 ~~~~~~~~--~~~~~~~~~~C~~~~~~~----~~~~P~i~~~f~g-~~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~---~ 276 (386)
.+++.... ......+++.||..++.. +..+|+|+|+|.| +..|+|++++|++.... +.+|++++..+ .
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~lP~i~f~f~g~~~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~ 369 (413)
T 3vla_A 292 IKESAARNITRVASVAPFGACFSTDNILSTRLGPSVPSIDLVLQSESVVWTITGSNSMVYIND--NVVCLGVVDGGSNLR 369 (413)
T ss_dssp HHHHHHTTCCEECCCTTCSCEEECTTCCEETTEECCCCEEEECSSTTCEEEECHHHHEEEEET--TEEEECEEEEESSCS
T ss_pred HHHhcccCCCcCCCCCCCcceeccCCccccccccCCCcEEEEEcCCcEEEEeCccceEEEeCC--CcEEEEEEecCCCcc
Confidence 88764211 111224578999876532 3589999999976 48999999999987654 67899998764 2
Q ss_pred CceEEcceeeeeEEEEEecCCCEEEEEcC------CCCCCC
Q 016600 277 DIGTIGQNFMTGYRVVFDRENLKLGWSHS------NCQDLN 311 (386)
Q Consensus 277 ~~~IlG~~fl~~~yvvFD~e~~rIGfa~~------~C~~~~ 311 (386)
+.||||+.||+++|+|||++|+|||||++ +|.+.+
T Consensus 370 ~~~IlGd~fl~~~~vvfD~~~~riGfa~~~~~~~~~c~~~~ 410 (413)
T 3vla_A 370 TSIVIGGHQLEDNLVQFDLATSRVGFSGTLLGSRTTCANFN 410 (413)
T ss_dssp SSEEECHHHHTTEEEEEETTTTEEEEEEEGGGGTCCGGGSB
T ss_pred cceeEehhhhcCeEEEEECCCCEEEEEEecccCcccccCcC
Confidence 58999999999999999999999999985 566654
No 2
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=2.7e-45 Score=364.92 Aligned_cols=294 Identities=21% Similarity=0.328 Sum_probs=225.7
Q ss_pred CCCCCCCccccCCCcCCCCCC--C---CCCC------CCCCceeeecC-CCCceEeEEEEEEEEEeecCCCCc---cccc
Q 016600 11 PSASSTSKHLSCSHRLCDLGT--S---CQNP------KQPCPYTMDYY-TENTSSSGLLVEDILHLISGGDNA---LKNS 75 (386)
Q Consensus 11 p~~SsT~~~~~C~~~~C~~~~--~---C~~~------~~~c~~~i~Y~-~g~s~~~G~~~~D~v~l~~~~~~~---~~~~ 75 (386)
+.+|+||+.++|.+..|.... . |.++ .+.|.|.+.|+ ++ +.++|.+++|+|+|++..... ....
T Consensus 54 ~~~Sst~~~~~C~s~~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~-~~~~G~~~~Dtv~ig~~~g~~~~~~~~~ 132 (403)
T 3aup_A 54 QYSSKTYQAPFCHSTQCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQ-QTGLGELGEDVLAIHATQGSTQQLGPLV 132 (403)
T ss_dssp CCCCSSCBCCCTTBHHHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTT-EEEEEEEEEEEEEEEECCC----CCCEE
T ss_pred CCCCCCCCccCCCCccccCccccCccccCCCCCCCCCCCcceeEeecCCCC-ceeeEEEEEEEEEecccCCccccccccc
Confidence 468999999999998887532 1 2121 24699999998 55 789999999999999842110 0012
Q ss_pred ccccEEEeeeeeccCC-CCCCCCCceEEecCCCCCChHHHHHhcCCCCCeEEEeecCC--CCceEEECCCCCC-------
Q 016600 76 VQASVIIGCGMKQSGG-YLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKD--DSGRIFFGDQGPA------- 145 (386)
Q Consensus 76 ~~~~~~fg~~~~~~g~-~~~~~~~dGIlGLg~~~~S~~~~L~~~glI~~~FSl~l~~~--~~G~i~fGg~d~~------- 145 (386)
.+.++.|||+..+.+. +.. ..+|||||||+..++++.||++..+.+++||+||.+. ..|.|+||+ |+.
T Consensus 133 ~v~~~~Fg~~~~~~~~~~~~-~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G 210 (403)
T 3aup_A 133 TVPQFLFSCAPSFLVQKGLP-RNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQN 210 (403)
T ss_dssp EEEEEEEEEECGGGGSSSSS-TTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTT
T ss_pred cccCEEEECCcccccccCCC-CCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-Cchhcccccc
Confidence 5678999999987543 322 3569999999999999999976555589999999873 579999999 642
Q ss_pred -----CCeeeeeeecCCcceeEEEEEeEEEEcCeee-cC-C-C--------ceEEEeccccceeeCHHHHHHHHHHHHHh
Q 016600 146 -----TQQSTSFLASNGKYITYIIGVETCCIGSSCL-KQ-T-S--------FKAIVDSGSSFTFLPKEVYETIAAEFDRQ 209 (386)
Q Consensus 146 -----~~~~~p~v~~~~~~~~y~V~l~~i~v~~~~~-~~-~-~--------~~~iiDSGTt~~~lP~~~~~~l~~~i~~~ 209 (386)
.+.|+|++..+ ..+|.|.|++|.||++.+ .. . . ..+||||||++++||+++|++|.++|.++
T Consensus 211 ~~~~~~l~~~Pl~~~~--~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~ 288 (403)
T 3aup_A 211 QDIFHDLAFTPLTITL--QGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQ 288 (403)
T ss_dssp CCTTTTEEEEECEECT--TSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHT
T ss_pred ccccCceeecccccCC--CCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHH
Confidence 45799998754 258999999999999988 42 1 2 24999999999999999999999999877
Q ss_pred cccccccccccccccccccccCCCCCCCeEEEEEcCC--ceeeecCCeEEEEeecceeeEEEEEEccCC---CceEEcce
Q 016600 210 VNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQN--NSFVVNNPVFVIYGTQVVTGFCLAIQPVDG---DIGTIGQN 284 (386)
Q Consensus 210 ~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g~--~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~---~~~IlG~~ 284 (386)
+...........+.+|+..+ ....+|+|+|+|.|+ ..|+|++++|++.... +..|++|+..+. +.||||+.
T Consensus 289 ~~~~~~~~~~~~~~~c~~c~--~~~~~P~i~f~f~g~~~~~~~l~~~~y~~~~~~--~~~C~~~~~~~~~~~~~~ILG~~ 364 (403)
T 3aup_A 289 LPKQAQVKSVAPFGLCFNSN--KINAYPSVDLVMDKPNGPVWRISGEDLMVQAQP--GVTCLGVMNGGMQPRAEITLGAR 364 (403)
T ss_dssp SCGGGEECCCTTCSCEECGG--GCCCCCCEEEEESSTTCCEEEECHHHHEEEC-----CEEECEEECCSCCSSSEEECHH
T ss_pred hccccccCCCCCCCceEECC--CcCcCCcEEEEEcCCCceEEEEcccceEEEcCC--CeEEEEEEcCCCCCCCcEEEChH
Confidence 65422211112345787543 334799999999766 5999999999987642 578999988653 58999999
Q ss_pred eeeeEEEEEecCCCEEEE-------EcCCCCCCCCC
Q 016600 285 FMTGYRVVFDRENLKLGW-------SHSNCQDLNDG 313 (386)
Q Consensus 285 fl~~~yvvFD~e~~rIGf-------a~~~C~~~~~~ 313 (386)
|||++|+|||++|+|||| ++++|.+.++.
T Consensus 365 fl~~~yvvfD~~~~rIGf~A~~~~~~~~~C~~~~~~ 400 (403)
T 3aup_A 365 QLEENLVVFDLARSRVGFSTSSLHSHGVKCADLFNF 400 (403)
T ss_dssp HHTTSCEEEETTTTEEEEESSCGGGGTCCGGGSCCT
T ss_pred HhcCeEEEEECCCCEEEEecccccccCCCccccccc
Confidence 999999999999999999 67788876653
No 3
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=5.8e-45 Score=356.18 Aligned_cols=264 Identities=19% Similarity=0.305 Sum_probs=211.7
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+. ..|.|.+.|++| +++|.+++|+|+|++. ...++.|
T Consensus 61 C~~~~~y~~~~SsT~~~------------------~~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~f 112 (351)
T 1tzs_A 61 CKTHSRFQPSQSSTYSQ------------------PGQSFSIQYGTG--SLSGIIGADQVSVEGL--------TVVGQQF 112 (351)
T ss_dssp GTTSCCBCGGGCTTCBC------------------CSCEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred cCCCCcCCcccCcceEE------------------CCCEEEEEeCCC--CeEEEEEEeEEEECCe--------EECCeEE
Confidence 45577888888888877 348999999998 5899999999999875 5678999
Q ss_pred eeeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCCC----CceEEECCCCCCC----C
Q 016600 83 GCGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQGPAT----Q 147 (386)
Q Consensus 83 g~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~~----~G~i~fGg~d~~~----~ 147 (386)
||+..+.+..+....+|||||||+..++ ++++|+++|+| +++||+||++.. .|.|+||++|+++ +
T Consensus 113 g~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l 192 (351)
T 1tzs_A 113 GESVTEPGQTFVDAEFDGILGLGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSL 192 (351)
T ss_dssp EEECSCCCGGGGGCSCSEEEECSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCC
T ss_pred EEEEeccccccccCCCceEEecCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCce
Confidence 9999877654444467999999998665 77899999999 899999999863 7999999999865 5
Q ss_pred eeeeeeecCCcceeEEEEEeEEEEcCeeec-CCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccc
Q 016600 148 QSTSFLASNGKYITYIIGVETCCIGSSCLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCY 226 (386)
Q Consensus 148 ~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~-~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~ 226 (386)
.|+|+.. ..+|.|.|++|.|+++.+. .....+||||||++++||++++++|.+++.... .. +.+...|+
T Consensus 193 ~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~--g~~~~~C~ 262 (351)
T 1tzs_A 193 NWVPVTK----QAYWQIALDNIQVGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP----VD--GEYAVECA 262 (351)
T ss_dssp EEEECSE----ETTEEEEEEEEEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----CS--SSEEECGG
T ss_pred EEEecCC----CceEEEEeCEEEECCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCCcc----cC--CeEEEeCC
Confidence 6888753 3689999999999998853 456789999999999999999999988874321 11 23345676
Q ss_pred ccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEcc-----CCCceEEcceeeeeEEEEEecCCCEE
Q 016600 227 KSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKL 300 (386)
Q Consensus 227 ~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvvFD~e~~rI 300 (386)
.. ..+|+|+|+| +|..++|++++|++.........|+ +|+.. ..+.||||+.|||++|+|||++++||
T Consensus 263 ~~-----~~~P~i~f~f-~g~~~~i~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~ri 336 (351)
T 1tzs_A 263 NL-----NVMPDVTFTI-NGVPYTLSPTAYTLLDFVDGMQFCSSGFQGLDIHPPAGPLWILGDVFIRQFYSVFDRGNNRV 336 (351)
T ss_dssp GG-----GGSCCEEEEE-TTEEEEECTTTSEECC-----CCEEESEEECCCCTTTCSCEEECHHHHHHEEEEEETTTTEE
T ss_pred CC-----ccCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCCCCeEEEChHHhhheEEEEECCCCEE
Confidence 53 4789999999 7899999999999876532245787 67764 24689999999999999999999999
Q ss_pred EEEcCCCCCC
Q 016600 301 GWSHSNCQDL 310 (386)
Q Consensus 301 Gfa~~~C~~~ 310 (386)
|||+++|...
T Consensus 337 gfA~~~~~s~ 346 (351)
T 1tzs_A 337 GLAPAVPWSH 346 (351)
T ss_dssp EEEEBC----
T ss_pred EEEECCcccc
Confidence 9999998763
No 4
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.8e-45 Score=360.56 Aligned_cols=284 Identities=18% Similarity=0.357 Sum_probs=221.5
Q ss_pred CCCccccCCCcCCCCC-----CCCCCC-------CCCC-ceeeecCCCCceEeEEEEEEEEEeecCCCCccccccccc--
Q 016600 15 STSKHLSCSHRLCDLG-----TSCQNP-------KQPC-PYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQAS-- 79 (386)
Q Consensus 15 sT~~~~~C~~~~C~~~-----~~C~~~-------~~~c-~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~-- 79 (386)
.+|+.++|++..|... ..|... ...| .|.++|++| +.++|++++|+|+|++.+.. ..+.+
T Consensus 43 ~~~~~~~C~s~~C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdG-s~~~G~l~~Dtv~ig~~~g~----~~v~~~~ 117 (381)
T 1t6e_X 43 QPPAEIPCSSPTCLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGS----KPVSKVN 117 (381)
T ss_dssp CCCCCCBTTSHHHHHHHSSCCTTCCCCCC------CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSS----SEEEEEE
T ss_pred CCCCccCCCCchhccccCCCCCCCCCccCCcCcCCCccccccccccCC-ceeeEEEEEEEEEeeccCCC----cccccee
Confidence 3566789998888642 357542 2457 599999998 66799999999999964211 12233
Q ss_pred --EEEeeeeeccCCCCCCCCCceEEecCCCCCChHHHHHhcCCCCCeEEEeecCCCCceEEECCCCCC------CCeeee
Q 016600 80 --VIIGCGMKQSGGYLDGVAPDGLIGLGLGEISVPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPA------TQQSTS 151 (386)
Q Consensus 80 --~~fg~~~~~~g~~~~~~~~dGIlGLg~~~~S~~~~L~~~glI~~~FSl~l~~~~~G~i~fGg~d~~------~~~~~p 151 (386)
+.|||+.++....+. ..+|||||||++.++++.||+++++++++||+||.+...|+|+||+++.. .+.|+|
T Consensus 118 ~~~~Fg~~~~~~~~~~~-~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tP 196 (381)
T 1t6e_X 118 VGVLAACAPSKLLASLP-RGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTP 196 (381)
T ss_dssp EEEEEEECCGGGGTTSC-TTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEE
T ss_pred eeeEeecCcccccCCCC-CCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeec
Confidence 478999886321111 35699999999999999999999877999999999877899999998753 367999
Q ss_pred eeecCCcceeEEEEEeEEEEcCeeecC--C---CceEEEeccccceeeCHHHHHHHHHHHHHhccc--------cccccc
Q 016600 152 FLASNGKYITYIIGVETCCIGSSCLKQ--T---SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVND--------TITSFE 218 (386)
Q Consensus 152 ~v~~~~~~~~y~V~l~~i~v~~~~~~~--~---~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~--------~~~~~~ 218 (386)
++..+.. .+|.|.|++|.||++.+.. . ..++||||||++++||+++|++|.++|.+++.. .+....
T Consensus 197 l~~~~~~-~~y~v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~ 275 (381)
T 1t6e_X 197 LVTKGGS-PAHYISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEA 275 (381)
T ss_dssp CBCCTTC-CSCEECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECC
T ss_pred cccCCCC-cceEEEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCC
Confidence 9875433 3566999999999998763 2 236999999999999999999999999887642 111012
Q ss_pred ccccccccccccCC----CCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEEEEccCC--------CceEEcceee
Q 016600 219 GYPWKCCYKSSSQR----LPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDG--------DIGTIGQNFM 286 (386)
Q Consensus 219 ~~~~~~C~~~~~~~----~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~--------~~~IlG~~fl 286 (386)
...++.||..++.. ...+|+|+|+|.|+..++|++++|++.... +.+|++++..+. +.||||+.||
T Consensus 276 ~~~~~~C~~~~~~~~~~~~~~~P~i~f~f~gg~~~~l~~~~y~~~~~~--~~~Cl~~~~~~~~~~~~~~~~~~ILGd~fl 353 (381)
T 1t6e_X 276 VAPFGVCYDTKTLGNNLGGYAVPNVQLGLDGGSDWTMTGKNSMVDVKQ--GTACVAFVEMKGVAAGDGRAPAVILGGAQM 353 (381)
T ss_dssp CTTCSCEEEGGGCCEETTEECCCCEEEEETTSCEEEECHHHHEEEEET--TEEEESEEECCCCC------CSEEECHHHH
T ss_pred CCCCCccCCCCCCcccccCCcCCeEEEEECCCcEEEeCCCeEEEEcCC--CeEEEEEEcCCCcccccCCCceEEEChHHh
Confidence 24568999876532 247999999997779999999999987643 678999987653 5799999999
Q ss_pred eeEEEEEecCCCEEEEEcCCC
Q 016600 287 TGYRVVFDRENLKLGWSHSNC 307 (386)
Q Consensus 287 ~~~yvvFD~e~~rIGfa~~~C 307 (386)
|++|+|||++|+|||||+...
T Consensus 354 ~~~yvvfD~~~~riGfA~~~~ 374 (381)
T 1t6e_X 354 EDFVLDFDMEKKRLGFSRLPH 374 (381)
T ss_dssp TTEEEEEETTTTEEEEEECCT
T ss_pred CCcEEEEECCCCEEEEecccC
Confidence 999999999999999999754
No 5
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=1e-44 Score=355.63 Aligned_cols=271 Identities=20% Similarity=0.242 Sum_probs=220.8
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+.. .|.|.+.|++| +++|.+++|+|+|++. .+.++.|
T Consensus 57 C~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~f 108 (361)
T 1mpp_A 57 CVGKRFFDPSSSSTFKET------------------DYNLNITYGTG--GANGIYFRDSITVGGA--------TVKQQTL 108 (361)
T ss_dssp CCSSCCBCGGGCTTCEEE------------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred CCCCCcCCCccCCceEec------------------CCeEEEEECCc--eEEEEEEEEEEEECCE--------EEeceEE
Confidence 456778888888888874 38999999998 4899999999999975 5688999
Q ss_pred eeeeeccC-----CCCCCCCCceEEecCCCCCC------------hHHHHHhcCCC-CCeEEEeecCC-CCceEEECCCC
Q 016600 83 GCGMKQSG-----GYLDGVAPDGLIGLGLGEIS------------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQG 143 (386)
Q Consensus 83 g~~~~~~g-----~~~~~~~~dGIlGLg~~~~S------------~~~~L~~~glI-~~~FSl~l~~~-~~G~i~fGg~d 143 (386)
||++.+.+ ..+....++||||||+..++ ++++|+++|+| +++||+||++. ..|.|+||++|
T Consensus 109 g~~~~~~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d 188 (361)
T 1mpp_A 109 AYVDNVSGPTAEQSPDSELFLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVN 188 (361)
T ss_dssp EEEEEEESGGGSSCTTCSSCCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCC
T ss_pred EEEEeccCccccccccccCCCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCC
Confidence 99999876 44444467999999997544 56799999999 89999999985 47999999999
Q ss_pred CCC----CeeeeeeecCCcceeEEEEEeEEEEcCeeec-CCCceEE-EeccccceeeCHHHHHHHHHHHHHhcccccccc
Q 016600 144 PAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLK-QTSFKAI-VDSGSSFTFLPKEVYETIAAEFDRQVNDTITSF 217 (386)
Q Consensus 144 ~~~----~~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~-~~~~~~i-iDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~ 217 (386)
+++ +.|+|++.......+|.|.|++|.|+++.+. .....+| |||||++++||++++++|.++|.... ...
T Consensus 189 ~~~~~g~l~~~p~~~~~~~~~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~----~~~ 264 (361)
T 1mpp_A 189 NTLLGGDIQYTDVLKSRGGYFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDA----TES 264 (361)
T ss_dssp GGGBSSCCEEEECEEETTEEEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTC----EEE
T ss_pred hhhcCCceEEEEcccCCCceeEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCcc----cCC
Confidence 864 5699997654433499999999999998874 3456899 99999999999999999998885432 111
Q ss_pred cccccccccccccCCCCCC-CeEEEEEc-C-----CceeeecCCeEEEEeecceeeEEE-EEEccCCCceEEcceeeeeE
Q 016600 218 EGYPWKCCYKSSSQRLPKL-PSVKLMFP-Q-----NNSFVVNNPVFVIYGTQVVTGFCL-AIQPVDGDIGTIGQNFMTGY 289 (386)
Q Consensus 218 ~~~~~~~C~~~~~~~~~~~-P~i~~~f~-g-----~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~~~~~IlG~~fl~~~ 289 (386)
...+...|+.. ..+ |+|+|+|. + +..++|++++|++....+ ...|+ +|+....+.||||+.|||++
T Consensus 265 ~g~~~~~C~~~-----~~~~p~i~f~f~~g~~~~~g~~~~i~~~~y~~~~~~~-~~~C~~~i~~~~~~~~iLG~~fl~~~ 338 (361)
T 1mpp_A 265 QQGYTVPCSKY-----QDSKTTFSLVLQKSGSSSDTIDVSVPISKMLLPVDKS-GETCMFIVLPDGGNQFIVGNLFLRFF 338 (361)
T ss_dssp TTEEEEEHHHH-----TTCCCEEEEEEECTTCSSCEEEEEEEGGGGEEECSSS-SCEEEESEEEESSSCCEEEHHHHTTE
T ss_pred CCcEEEECCCc-----ccCCCcEEEEEEcCCcCCCCeEEEECHHHhEEecCCC-CCeeEEEEEeCCCCCEEEChHHhccE
Confidence 22344567753 467 99999994 4 789999999999876432 45786 78875557899999999999
Q ss_pred EEEEecCCCEEEEEcCCCCCCC
Q 016600 290 RVVFDRENLKLGWSHSNCQDLN 311 (386)
Q Consensus 290 yvvFD~e~~rIGfa~~~C~~~~ 311 (386)
|+|||++++|||||+++|+..+
T Consensus 339 yvvfD~~~~~igfa~~~~~~~~ 360 (361)
T 1mpp_A 339 VNVYDFGKNRIGFAPLASGYEN 360 (361)
T ss_dssp EEEEETTTTEEEEEEBCTTTCC
T ss_pred EEEEECCCCEEEEEEcccCCCC
Confidence 9999999999999999998654
No 6
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.2e-44 Score=349.08 Aligned_cols=264 Identities=19% Similarity=0.306 Sum_probs=216.6
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
+..++.|+|++|+||+.+. |.|.+.|++| +.++|.+++|+|+|++. .+.++.|
T Consensus 53 C~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~g-s~~~G~~~~D~v~~g~~--------~v~~~~f 105 (339)
T 3fv3_A 53 CKSSGTFTPSSSSSYKNLG------------------AAFTIRYGDG-STSQGTWGKDTVTINGV--------SITGQQI 105 (339)
T ss_dssp TTTTCCBCGGGCTTCEEEE------------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred CCCCCcCCCccCcceeeCC------------------ceEEEEECCC-ceEEEEEEEEEEEECCE--------EECceEE
Confidence 4567899999999999854 8999999997 88999999999999985 5679999
Q ss_pred eeeeeccCCCCCCCCCceEEecCCCCCC----------------hHHHHHhcCCC-CCeEEEeecCC--CCceEEECCCC
Q 016600 83 GCGMKQSGGYLDGVAPDGLIGLGLGEIS----------------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQG 143 (386)
Q Consensus 83 g~~~~~~g~~~~~~~~dGIlGLg~~~~S----------------~~~~L~~~glI-~~~FSl~l~~~--~~G~i~fGg~d 143 (386)
||++...+ .+||||||+..++ ++++|+++|+| +++||+||++. ..|.|+|||+|
T Consensus 106 g~~~~~~~-------~~GilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d 178 (339)
T 3fv3_A 106 ADVTQTSV-------DQGILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVD 178 (339)
T ss_dssp EEEEEESS-------SSCEEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEE
T ss_pred EEEEecCC-------CceeEEecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeec
Confidence 99998753 4899999997643 88999999999 89999999875 37999999999
Q ss_pred CCC----CeeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccc
Q 016600 144 PAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEG 219 (386)
Q Consensus 144 ~~~----~~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~ 219 (386)
+++ +.++|++. ..+|.|.+++|.|+++.+. ....+||||||++++||++++++|.++|....... .....
T Consensus 179 ~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~-~~~~~ 252 (339)
T 3fv3_A 179 NAKYSGKLVAEQVTS----SQALTISLASVNLKGSSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQV-ARDQY 252 (339)
T ss_dssp TTSBSSCCEEEEBCC----SSSCEEEEEEEEESSCEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEE-ETTEE
T ss_pred hHHeecceEEEeccc----CccEEEEEEEEEECCEeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEccc-cccCc
Confidence 876 45888753 2589999999999999886 34689999999999999999999999886432210 00122
Q ss_pred cccccccccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEEEEccCCCceEEcceeeeeEEEEEecCCCE
Q 016600 220 YPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLAIQPVDGDIGTIGQNFMTGYRVVFDRENLK 299 (386)
Q Consensus 220 ~~~~~C~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~i~~~~~~~~IlG~~fl~~~yvvFD~e~~r 299 (386)
.+...|+. ..+|.|+|+|.++..++|++++|+++... +.|+++|++ .+.||||+.|||++|+|||++++|
T Consensus 253 ~~~~~C~~------~~~p~i~f~f~~g~~~~v~~~~~~~~~~~--~~C~~~i~~--~~~~ilG~~fl~~~y~vfD~~~~~ 322 (339)
T 3fv3_A 253 LYFIDCNT------DTSGTTVFNFGNGAKITVPNTEYVYQNGD--GTCLWGIQP--SDDTILGDNFLRHAYLLYNLDANT 322 (339)
T ss_dssp EEEECTTC------CCCSEEEEEETTSCEEEEEGGGGEEECSS--SCEEESEEE--CSSCEECHHHHTTEEEEEETTTTE
T ss_pred eEEEecCC------CCCCcEEEEECCCCEEEECHHHheeeCCC--CeEEEEEEe--CCcEEeChHHHhCEEEEEECCCCE
Confidence 34456664 36899999997789999999999987532 344478887 368999999999999999999999
Q ss_pred EEEEcCCCCCCCCCCcccC
Q 016600 300 LGWSHSNCQDLNDGTKSPL 318 (386)
Q Consensus 300 IGfa~~~C~~~~~~~~~~~ 318 (386)
||||+++|++.+ ++++|
T Consensus 323 igfA~~~~~~~s--~i~~i 339 (339)
T 3fv3_A 323 ISIAQVKYTTDS--SISAV 339 (339)
T ss_dssp EEEEEBCCCSCC--CEEEC
T ss_pred EEEEecCCCCcc--ceEEC
Confidence 999999998543 34543
No 7
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=2.5e-44 Score=349.38 Aligned_cols=254 Identities=19% Similarity=0.336 Sum_probs=210.3
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+... |.|.++|++| +.++|.+++|+|+|++. ...++.|
T Consensus 59 C~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~~~~~~f 111 (334)
T 1j71_A 59 CKQEGTFDPSSSSSAQNLN------------------QDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQF 111 (334)
T ss_dssp GGSSCCBCGGGCTTCEEEE------------------EEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred ccCCCcCCcccCCCcccCC------------------CceEEEECCC-CEEEEEEEEEEEEECCE--------EEccEEE
Confidence 4567889999999998853 8999999998 77899999999999975 5689999
Q ss_pred eeeeeccCCCCCCCCCceEEecCCCCC--------ChHHHHHhcCCC-CCeEEEeecCC--CCceEEECCCCCCCC----
Q 016600 83 GCGMKQSGGYLDGVAPDGLIGLGLGEI--------SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPATQ---- 147 (386)
Q Consensus 83 g~~~~~~g~~~~~~~~dGIlGLg~~~~--------S~~~~L~~~glI-~~~FSl~l~~~--~~G~i~fGg~d~~~~---- 147 (386)
||+..+. ..+||||||+..+ +++++|+++|+| +++||+||++. ..|.|+||++|++++
T Consensus 112 g~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l 184 (334)
T 1j71_A 112 ADVTTTS-------VDQGIMGIGFTADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTL 184 (334)
T ss_dssp EEEEEES-------SSSCEEECSCGGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEE
T ss_pred EEEEecC-------CCccEEEEcCCcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCce
Confidence 9999763 3589999999865 689999999999 89999999873 479999999999874
Q ss_pred eeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccc-cccc
Q 016600 148 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPW-KCCY 226 (386)
Q Consensus 148 ~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~-~~C~ 226 (386)
.|+|++. ..+|.|.|++|.|+++.+. ....+||||||++++||++++++|.++|..... .....+. ..|+
T Consensus 185 ~~~p~~~----~~~~~v~l~~i~v~g~~~~-~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~~~~~~~~C~ 255 (334)
T 1j71_A 185 TALPVTS----SVELRVHLGSINFDGTSVS-TNADVVLDSGTTITYFSQSTADKFARIVGATWD----SRNEIYRLPSCD 255 (334)
T ss_dssp EEEECCC----SSSCEEEEEEEEETTEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE----TTTTEEECSSSC
T ss_pred EEEEccC----CCeEEEEEeEEEECCEecc-CCccEEEeCCCCcEecCHHHHHHHHHHcCCccc----CCCceEEEEcCC
Confidence 4777753 2589999999999999886 356899999999999999999999998865431 1111223 5564
Q ss_pred ccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEE-EEccCCCceEEcceeeeeEEEEEecCCCEEEEEcC
Q 016600 227 KSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHS 305 (386)
Q Consensus 227 ~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~ 305 (386)
.+|.|+|+|.++..++|++++|++...+ +..|+. ++.. +.||||+.|||++|+|||++++|||||++
T Consensus 256 --------~~p~i~f~f~~g~~~~i~~~~y~~~~~~--~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 323 (334)
T 1j71_A 256 --------LSGDAVFNFDQGVKITVPLSELILKDSD--SSICYFGISRN--DANILGDNFLRRAYIVYDLDDKTISLAQV 323 (334)
T ss_dssp --------CCSEEEEEESTTCEEEEEGGGGEEECSS--SSCEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred --------CCCceEEEEcCCcEEEECHHHheeecCC--CCeeEEEEeEC--CCcEEChHhhccEEEEEECCCCEEEEEec
Confidence 3799999998789999999999998643 334864 5554 47999999999999999999999999999
Q ss_pred CCCCCC
Q 016600 306 NCQDLN 311 (386)
Q Consensus 306 ~C~~~~ 311 (386)
+|...+
T Consensus 324 ~~~~~~ 329 (334)
T 1j71_A 324 KYTSSS 329 (334)
T ss_dssp CCCSCC
T ss_pred CCCCcc
Confidence 998533
No 8
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=1.5e-44 Score=356.90 Aligned_cols=258 Identities=21% Similarity=0.343 Sum_probs=211.1
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
..++.|+|++|+||+.. .|.|.++|++| +++|++++|+|+|++. .+. +.||
T Consensus 102 ~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~-~~Fg 152 (383)
T 2x0b_A 102 VYHKLFDASDSSSYKHN------------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TVT-QMFG 152 (383)
T ss_dssp HTSCCBCGGGCTTCEEE------------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEE-EEEE
T ss_pred cCCCCCCCCCCCcEEEC------------------CcEEEEEcCCc--cEEEEEEeeEEEEcCc--------eEE-EEEE
Confidence 35688999999999884 48999999998 5999999999999985 456 9999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC--C----CceEEECCCCCCCC---
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--D----SGRIFFGDQGPATQ--- 147 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~--~----~G~i~fGg~d~~~~--- 147 (386)
|++.+.+..+....+|||||||+..++ ++++|+++|+| +++||+||++. . .|.|+|||+|++++
T Consensus 153 ~a~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~ 232 (383)
T 2x0b_A 153 EVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN 232 (383)
T ss_dssp EEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEE
T ss_pred EEEecCCcccccCCCceEeccCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCc
Confidence 999987643344467999999998765 67899999999 89999999875 2 79999999999763
Q ss_pred -eeeeeeecCCcceeEEEEEeEEEEcCeee-cCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccc
Q 016600 148 -QSTSFLASNGKYITYIIGVETCCIGSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCC 225 (386)
Q Consensus 148 -~~~p~v~~~~~~~~y~V~l~~i~v~~~~~-~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C 225 (386)
.|+|+.. ..+|.|.|++|.|+++.+ ......+||||||+++++|++++++|.++|.+. . ..+.+...|
T Consensus 233 l~~~pv~~----~~~w~v~l~~i~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----~--~~g~~~v~C 302 (383)
T 2x0b_A 233 FHYINLIK----TGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAK----K--RLFDYVVKC 302 (383)
T ss_dssp EEEEEBSS----TTSCEEEECEEEESSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHTCE----E--CSSCEEEEG
T ss_pred eEEEEcCC----CceEEEEEeEEEeCCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhCCc----c--cCCcEEEec
Confidence 4777742 379999999999999874 345678999999999999999999998887432 2 222334456
Q ss_pred cccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEcc-----CCCceEEcceeeeeEEEEEecCCCE
Q 016600 226 YKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLK 299 (386)
Q Consensus 226 ~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvvFD~e~~r 299 (386)
+. ...+|+|+|+| +|..++|++++|++......+..|+ +|+.. .++.||||+.|||++|+|||++|+|
T Consensus 303 ~~-----~~~~P~i~f~~-~g~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~r 376 (383)
T 2x0b_A 303 NE-----GPTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNR 376 (383)
T ss_dssp GG-----TTTCCCEEEEE-TTEEEEECHHHHBCCCCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTE
T ss_pred cc-----cccCceEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCE
Confidence 64 35799999999 6799999999999876533245787 68754 2468999999999999999999999
Q ss_pred EEEEcCC
Q 016600 300 LGWSHSN 306 (386)
Q Consensus 300 IGfa~~~ 306 (386)
||||+++
T Consensus 377 IGfA~a~ 383 (383)
T 2x0b_A 377 IGFALAR 383 (383)
T ss_dssp EEEEEEC
T ss_pred EeEEEcC
Confidence 9999863
No 9
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=4.6e-44 Score=345.99 Aligned_cols=255 Identities=18% Similarity=0.335 Sum_probs=211.1
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+.. .|.|.++|++| +++|.+++|+|+|++. ...++.||
T Consensus 51 ~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~~~~~~fg 102 (324)
T 1am5_A 51 SNHNKFKPRQSSTYVET------------------GKTVDLTYGTG--GMRGILGQDTVSVGGG--------SDPNQELG 102 (324)
T ss_dssp HTSCCBCGGGCTTCEEE------------------EEEEEEECSSC--EEEEEEEEEEEESSSS--------CEEEEEEE
T ss_pred cCCCcCCCccCCCeEeC------------------CcEEEEEECCC--CeEEEEEECceeECCc--------EEcccEEE
Confidence 34678999999998874 38999999998 5699999999999975 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC--CCceEEECCCCCCC----Ceee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQST 150 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~--~~G~i~fGg~d~~~----~~~~ 150 (386)
|+..+.+..+....+|||||||+..++ ++++|+++|+| +++||+||++. ..|.|+||++|+++ +.|+
T Consensus 103 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~ 182 (324)
T 1am5_A 103 ESQTEPGPFQAAAPFDGILGLAYPSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWI 182 (324)
T ss_dssp EEEECCSTTTTTCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEE
T ss_pred EEEecccccccCCCCceEEecCCccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEE
Confidence 999987754444467999999998654 78999999999 89999999985 37999999999864 5688
Q ss_pred eeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 016600 151 SFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS 230 (386)
Q Consensus 151 p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~ 230 (386)
|+.. ..+|.|.|++|.|+++.+......+||||||++++||++++++|.+++... ...+.+...|+.
T Consensus 183 p~~~----~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~------~~~g~~~~~C~~--- 249 (324)
T 1am5_A 183 PVTA----EKYWQVALDGITVNGQTAACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS------ENQGEMMGNCAS--- 249 (324)
T ss_dssp EEEE----ETTEEEEECEEEETTEECCCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE------ECCCCEECCTTS---
T ss_pred ecCC----CcEEEEEEeEEEECCceeeccCceEEEecCCccEECCHHHHHHHHHHhCCc------ccCCcEEEeCCC---
Confidence 8864 368999999999999886433488999999999999999999999887543 112223345553
Q ss_pred CCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC-----CCceEEcceeeeeEEEEEecCCCEEEEEc
Q 016600 231 QRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSH 304 (386)
Q Consensus 231 ~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvvFD~e~~rIGfa~ 304 (386)
...+|+|+|+| +|..++|++++|++.. +..|+ +|+..+ .+.||||+.|||++|+|||++++|||||+
T Consensus 250 --~~~~P~i~f~f-~g~~~~i~~~~y~~~~----~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfa~ 322 (324)
T 1am5_A 250 --VQSLPDITFTI-NGVKQPLPPSAYIEGD----QAFCTSGLGSSGVPSNTSELWIFGDVFLRNYYTIYDRTNNKVGFAP 322 (324)
T ss_dssp --SSSSCCEEEEE-TTEEEEECHHHHEEES----SSCEEECEEECCSCCSSSCEEEECHHHHHHEEEEEETTTTEEEEEE
T ss_pred --cccCCcEEEEE-CCEEEEECHHHhcccC----CCeEEEEEEECccCCCCCCcEEEChHHhccEEEEEECCCCEEEEEE
Confidence 45799999999 6799999999999876 45686 687642 46899999999999999999999999998
Q ss_pred CC
Q 016600 305 SN 306 (386)
Q Consensus 305 ~~ 306 (386)
++
T Consensus 323 a~ 324 (324)
T 1am5_A 323 AA 324 (324)
T ss_dssp BC
T ss_pred CC
Confidence 74
No 10
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=4.2e-44 Score=348.79 Aligned_cols=264 Identities=17% Similarity=0.303 Sum_probs=212.4
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+... |.|.++|++| +.++|.+++|+|+|++. ...++.|
T Consensus 59 C~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~f 111 (342)
T 2qzx_A 59 CKSAGSYSPASSRTSQNLN------------------TRFDIKYGDG-SYAKGKLYKDTVGIGGV--------SVRDQLF 111 (342)
T ss_dssp GGTTCCBCGGGCTTCEEEE------------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred ccCCCcCCcccCCCcccCC------------------CcEEEEeCCC-CeEEEEEEEEEEEECCE--------EecceEE
Confidence 3567889999999998853 8999999998 77899999999999975 5679999
Q ss_pred eeeeeccCCCCCCCCCceEEecCCCCC--------ChHHHHHhcCCC-CCeEEEeecCC--CCceEEECCCCCCC----C
Q 016600 83 GCGMKQSGGYLDGVAPDGLIGLGLGEI--------SVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----Q 147 (386)
Q Consensus 83 g~~~~~~g~~~~~~~~dGIlGLg~~~~--------S~~~~L~~~glI-~~~FSl~l~~~--~~G~i~fGg~d~~~----~ 147 (386)
||+..+. ..+||||||+..+ +++++|+++|+| +++||+||++. ..|.|+||++|+++ +
T Consensus 112 g~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l 184 (342)
T 2qzx_A 112 ANVWSTS-------ARKGILGIGFQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSL 184 (342)
T ss_dssp EEEEEEC-------SSSCEEECSCGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCC
T ss_pred EEEEecC-------CCcCEEEEccccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecce
Confidence 9999763 3589999999764 689999999999 89999999864 47999999999876 4
Q ss_pred eeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccccc
Q 016600 148 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYK 227 (386)
Q Consensus 148 ~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~ 227 (386)
.++|++. ..+|.|.|++|.|+++.+. ....+||||||++++||++++++|.++|......... ....+...|+
T Consensus 185 ~~~p~~~----~~~~~v~l~~i~v~g~~~~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~~~~~-~~~~~~~~C~- 257 (342)
T 2qzx_A 185 VDLPITS----EKKLTVGLRSVNVRGRNVD-ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMKFDSA-GNKVYVADCK- 257 (342)
T ss_dssp EEEECCC----SSSCEEEEEEEEETTEEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEEECTT-SCEEEEECTT-
T ss_pred EEEeccC----CceEEEEEeEEEECCEecC-CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeeeeccC-CCcEEEEECC-
Confidence 5888753 2589999999999999886 3568999999999999999999999988554321110 1112233454
Q ss_pred cccCCCCCCCeEEEEEcCCceeeecCCeEEEEee---cceeeEEEE-EEccCCCceEEcceeeeeEEEEEecCCCEEEEE
Q 016600 228 SSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGT---QVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWS 303 (386)
Q Consensus 228 ~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~---~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvvFD~e~~rIGfa 303 (386)
.+|.|+|+|.++..++|++++|++... ......|++ ++.. +.||||+.|||++|+|||++++|||||
T Consensus 258 -------~~p~i~f~f~~g~~~~i~~~~~~~~~~~~~~~~~~~C~~~i~~~--~~~iLG~~fl~~~y~vfD~~~~~igfA 328 (342)
T 2qzx_A 258 -------TSGTIDFQFGNNLKISVPVSEFLFQTYYTSGKPFPKCEVRIRES--EDNILGDNFLRSAYVVYNLDDKKISMA 328 (342)
T ss_dssp -------CCCEEEEEETTTEEEEEEGGGGEECCBCTTSCBCSSEEESEEEC--SSCEECHHHHTTEEEEEETTTTEEEEE
T ss_pred -------CCCcEEEEECCCcEEEEcHHHhcccccccCCCCCCccEEEEecC--CCcEeChHhhhcEEEEEECCCCEEEEE
Confidence 379999999878999999999998742 112457875 5543 469999999999999999999999999
Q ss_pred cCCCCCCCCCCcccC
Q 016600 304 HSNCQDLNDGTKSPL 318 (386)
Q Consensus 304 ~~~C~~~~~~~~~~~ 318 (386)
+++|...++ ++++
T Consensus 329 ~~~~~~~~~--i~~i 341 (342)
T 2qzx_A 329 PVKYTSESD--IVAI 341 (342)
T ss_dssp EBCCCSCCC--EEEC
T ss_pred eeCCCCCCC--eEEc
Confidence 999975433 3544
No 11
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=9.2e-44 Score=352.95 Aligned_cols=285 Identities=20% Similarity=0.233 Sum_probs=224.2
Q ss_pred CCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeec-CCCCcccccccccEEEe
Q 016600 5 DLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLIS-GGDNALKNSVQASVIIG 83 (386)
Q Consensus 5 ~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~-~~~~~~~~~~~~~~~fg 83 (386)
.++.|+|++|+||+.+. |.|.++|++| +++|.+++|+|+|++ .. ....+.|+
T Consensus 57 ~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~G--s~~G~~~~Dtv~ig~g~~-------~~~~~~~~ 109 (395)
T 2qp8_A 57 LHRYYQRQLSSTYRDLR------------------KGVYVPYTQG--KWEGELGTDLVSIPHGPN-------VTVRANIA 109 (395)
T ss_dssp CSCCCCGGGCTTCEEEE------------------EEEEEECSSC--EEEEEEEEEEEECTTSCS-------CEEEEEEE
T ss_pred ccCCcCcccCCCceeCC------------------ceEEEEECCc--EEEEEEEeEEEEECCCCC-------ceEEEEEE
Confidence 46789999999999854 8999999998 569999999999984 31 22246788
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCC--------ChHHHHHhcCCCCCeEEEeecCC------------CCceEEECCCC
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEI--------SVPSLLAKAGLIRNSFSMCFDKD------------DSGRIFFGDQG 143 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~--------S~~~~L~~~glI~~~FSl~l~~~------------~~G~i~fGg~d 143 (386)
++....+.+.....+|||||||+..+ +++++|+++++|+++||+||++. ..|.|+||++|
T Consensus 110 ~~~~~~~~f~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d 189 (395)
T 2qp8_A 110 AITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGID 189 (395)
T ss_dssp EEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCC
T ss_pred EEEccCcccccccCccceEEcCchhhccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcC
Confidence 87766555543446799999999765 36789999999988999999752 47999999999
Q ss_pred CCC----CeeeeeeecCCcceeEEEEEeEEEEcCeeecCC-----CceEEEeccccceeeCHHHHHHHHHHHHHhccccc
Q 016600 144 PAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQT-----SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTI 214 (386)
Q Consensus 144 ~~~----~~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~ 214 (386)
+++ +.|+|++. ..+|.|.|++|.|+++.+... ...+||||||++++||+++|++|.++|........
T Consensus 190 ~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~ 265 (395)
T 2qp8_A 190 HSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEK 265 (395)
T ss_dssp GGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSC
T ss_pred cccccCceEEeccCC----CceEEEEEEEEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhccccc
Confidence 876 34777753 368999999999999987532 35799999999999999999999999987654221
Q ss_pred cccc--ccccccccccccCCCCCCCeEEEEEcCCc-----eeeecCCeEEEEeec--ceeeEEE--EEEccCCCceEEcc
Q 016600 215 TSFE--GYPWKCCYKSSSQRLPKLPSVKLMFPQNN-----SFVVNNPVFVIYGTQ--VVTGFCL--AIQPVDGDIGTIGQ 283 (386)
Q Consensus 215 ~~~~--~~~~~~C~~~~~~~~~~~P~i~~~f~g~~-----~~~i~~~~y~~~~~~--~~~~~Cl--~i~~~~~~~~IlG~ 283 (386)
.... ..+...|+......+..+|+|+|+|.++. .+++++++|++.... +....|+ ++.+.+ +.||||+
T Consensus 266 ~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~p~~yi~~~~~~~~~~~~C~~~~i~~~~-~~~ILG~ 344 (395)
T 2qp8_A 266 FPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSS-TGTVMGA 344 (395)
T ss_dssp CCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEES-SCEEECH
T ss_pred CCccccccccccccccccchHhhCCcEEEEEccCCCCceEEEEECHHHhEeecccCCCCCceEEEEEecCCC-CcEEECh
Confidence 1100 11246898776555667999999997654 699999999987643 1234786 566543 6899999
Q ss_pred eeeeeEEEEEecCCCEEEEEcCCCCCCCCCCcccCCCC
Q 016600 284 NFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPG 321 (386)
Q Consensus 284 ~fl~~~yvvFD~e~~rIGfa~~~C~~~~~~~~~~~~~~ 321 (386)
.|||++|+|||++++|||||+++|...++.+++++.++
T Consensus 345 ~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i~g~ 382 (395)
T 2qp8_A 345 VIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGP 382 (395)
T ss_dssp HHHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEEEEE
T ss_pred HHhCCeeEEEECCCCEEEEEeccCCCCCCCccceecCC
Confidence 99999999999999999999999998777777777663
No 12
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=3.6e-44 Score=347.48 Aligned_cols=256 Identities=21% Similarity=0.310 Sum_probs=208.7
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+.. .|.|.+.|++| +++|.+++|+|+|++. ...++.||
T Consensus 52 ~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg 103 (329)
T 1dpj_A 52 FLHSKYDHEASSSYKAN------------------GTEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFA 103 (329)
T ss_dssp HTSCCBCGGGCTTCEEE------------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred CCcCcCCcccCcCeEEC------------------CcEEEEEECCc--eEEEEEEEEEEEECCe--------EECCeEEE
Confidence 34678899888888873 48999999998 7999999999999975 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC-----CCceEEECCCCCCCC----
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPATQ---- 147 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~-----~~G~i~fGg~d~~~~---- 147 (386)
|++.+.+..+....+|||||||+..++ ++++|+++|+| +++||+||++. ..|.|+||++|++++
T Consensus 104 ~~~~~~~~~f~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l 183 (329)
T 1dpj_A 104 EATSEPGLTFAFGKFDGILGLGYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDI 183 (329)
T ss_dssp EEEECCHHHHTTCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEE
T ss_pred EEEecCccccccCCcceEEEeCCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCce
Confidence 999876522222356999999998765 56889999999 89999999764 269999999998764
Q ss_pred eeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccccc
Q 016600 148 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYK 227 (386)
Q Consensus 148 ~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~ 227 (386)
.|+|+.. ..+|.|.|++|.|+++.+......+||||||++++||++++++|.++|.+. ... ..||.
T Consensus 184 ~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~-----~~~-----~g~~~ 249 (329)
T 1dpj_A 184 TWLPVRR----KAYWEVKFEGIGLGDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIGAK-----KGW-----TGQYT 249 (329)
T ss_dssp EEEECSS----BTTBEEEEEEEEETTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHTCE-----ECT-----TSSEE
T ss_pred EEEEcCC----CceEEEEeeeEEECCeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhCCc-----cCC-----CCeEE
Confidence 4777642 468999999999999988766789999999999999999999999887432 111 12344
Q ss_pred cccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEcc-----CCCceEEcceeeeeEEEEEecCCCEEE
Q 016600 228 SSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLKLG 301 (386)
Q Consensus 228 ~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvvFD~e~~rIG 301 (386)
.+|.....+|+|+|+| +|..++|++++|++... ..|+ +|+.. .++.||||+.|||++|+|||++++|||
T Consensus 250 ~~C~~~~~~P~i~f~f-~g~~~~i~~~~y~~~~~----~~C~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~ig 324 (329)
T 1dpj_A 250 LDCNTRDNLPDLIFNF-NGYNFTIGPYDYTLEVS----GSCISAITPMDFPEPVGPLAIVGDAFLRKYYSIYDLGNNAVG 324 (329)
T ss_dssp ECGGGGGGCCCEEEEE-TTEEEEECTTTSEEEET----TEEEECEEECCCCTTTCSEEEECHHHHTTEEEEEETTTTEEE
T ss_pred EECCCCCcCCcEEEEE-CCEEEEECHHHhEecCC----CEEEEEEEecccCCCCCCcEEEChHHhcceEEEEECCCCEEE
Confidence 4454456799999999 57899999999998753 4687 67654 246899999999999999999999999
Q ss_pred EEcCC
Q 016600 302 WSHSN 306 (386)
Q Consensus 302 fa~~~ 306 (386)
||+++
T Consensus 325 fA~~~ 329 (329)
T 1dpj_A 325 LAKAI 329 (329)
T ss_dssp EEEEC
T ss_pred EEECC
Confidence 99864
No 13
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=1.2e-43 Score=352.94 Aligned_cols=287 Identities=20% Similarity=0.238 Sum_probs=226.7
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+... |.|.++|++| +++|.+++|+|+|++.. .....+.|+
T Consensus 63 ~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~G--s~~G~~~~D~v~ig~~~------~~~~~~~~~ 116 (402)
T 3vf3_A 63 FLHRYYQRQLSSTYRDLR------------------KGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIA 116 (402)
T ss_dssp TCSCCCCGGGCTTCEEEE------------------EEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEE
T ss_pred cccCCcCcccCcccccCC------------------CEEEEEECcE--EEEEEEEEEEEEECCcc------ccceeeeEE
Confidence 457899999999999854 8999999998 57999999999999531 122345688
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCC--------ChHHHHHhcCCCCCeEEEeecC------------CCCceEEECCCC
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEI--------SVPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQG 143 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~--------S~~~~L~~~glI~~~FSl~l~~------------~~~G~i~fGg~d 143 (386)
|+....+.+.....+|||||||+..+ +++++|+++++|.++||+||++ ...|.|+||++|
T Consensus 117 ~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d 196 (402)
T 3vf3_A 117 AITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGID 196 (402)
T ss_dssp EEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCC
T ss_pred EEEccccccccCCCccceEEcCchhhcccCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcC
Confidence 88877666655456799999998754 4788999999998899999973 237999999999
Q ss_pred CCCC----eeeeeeecCCcceeEEEEEeEEEEcCeeecCC-----CceEEEeccccceeeCHHHHHHHHHHHHHhccccc
Q 016600 144 PATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLKQT-----SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTI 214 (386)
Q Consensus 144 ~~~~----~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~ 214 (386)
++++ .|+|+.. ..+|.|.+++|.|+++.+... ...+||||||++++||++++++|.++|........
T Consensus 197 ~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~ 272 (402)
T 3vf3_A 197 HSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEK 272 (402)
T ss_dssp GGGEEEEEEEEECSS----BTTBEECEEEEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSC
T ss_pred cccccCceEEEeCCc----CcEEEEEEeEEEECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccc
Confidence 9864 4677643 478999999999999988632 45799999999999999999999999988754221
Q ss_pred cccc--ccccccccccccCCCCCCCeEEEEEcCCc-----eeeecCCeEEEEeecce--eeEEEE--EEccCCCceEEcc
Q 016600 215 TSFE--GYPWKCCYKSSSQRLPKLPSVKLMFPQNN-----SFVVNNPVFVIYGTQVV--TGFCLA--IQPVDGDIGTIGQ 283 (386)
Q Consensus 215 ~~~~--~~~~~~C~~~~~~~~~~~P~i~~~f~g~~-----~~~i~~~~y~~~~~~~~--~~~Cl~--i~~~~~~~~IlG~ 283 (386)
.... ..+...|+......+..+|+|+|+|.++. .++|++++|++...... ...|++ +... .+.||||+
T Consensus 273 ~~~~~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~~~~~~~-~~~~ILG~ 351 (402)
T 3vf3_A 273 FPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQS-STGTVMGA 351 (402)
T ss_dssp CCTTGGGTCSCEEEETTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEECCCGGGTTEEEEEECEEEE-SSCEEECH
T ss_pred cCccccccccccccccccchHhhCCceEEEEecCCCCceEEEEECHHHheehhccCCCCCceEEEEeccCC-CCcEEECh
Confidence 1111 12357899876666678999999997654 58999999998765421 247875 4333 46899999
Q ss_pred eeeeeEEEEEecCCCEEEEEcCCCCCCCCCCcccCCCC
Q 016600 284 NFMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPG 321 (386)
Q Consensus 284 ~fl~~~yvvFD~e~~rIGfa~~~C~~~~~~~~~~~~~~ 321 (386)
.|||++|+|||++++|||||+++|+..++.+.+++.+|
T Consensus 352 ~fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i~gp 389 (402)
T 3vf3_A 352 VIMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGP 389 (402)
T ss_dssp HHHTTEEEEEEGGGTEEEEEEETTCCBCSSCBCEEEEE
T ss_pred HHhCCeEEEEECCCCEEEEEecccCcccCcccccccCc
Confidence 99999999999999999999999998887777777665
No 14
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=6.5e-44 Score=352.56 Aligned_cols=286 Identities=22% Similarity=0.312 Sum_probs=224.1
Q ss_pred CCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEee
Q 016600 5 DLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGC 84 (386)
Q Consensus 5 ~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg~ 84 (386)
.++.|+|++|+||+.+. |.|.++|++| +++|.+++|+|+|++.. .....+.|+|
T Consensus 49 ~~~~f~~~~SsT~~~~~------------------~~~~i~Yg~G--s~~G~~~~Dtv~i~~~~------~~~~~~~~~~ 102 (383)
T 2ewy_A 49 IDTYFDTERSSTYRSKG------------------FDVTVKYTQG--SWTGFVGEDLVTIPKGF------NTSFLVNIAT 102 (383)
T ss_dssp BSCCCCGGGCTTCEEEE------------------EEEEEECSSC--EEEEEEEEEEEEETTTE------EEEEEEEEEE
T ss_pred cccCcccccCccceeCC------------------ceEEEEECCc--EEEEEEEEEEEEECCCc------cceeEEEEEE
Confidence 36789999999999854 8999999998 57999999999998741 1223567888
Q ss_pred eeeccCCCCCCCCCceEEecCCCCCC--------hHHHHHhcCCCCCeEEEeecC---------CCCceEEECCCCCCC-
Q 016600 85 GMKQSGGYLDGVAPDGLIGLGLGEIS--------VPSLLAKAGLIRNSFSMCFDK---------DDSGRIFFGDQGPAT- 146 (386)
Q Consensus 85 ~~~~~g~~~~~~~~dGIlGLg~~~~S--------~~~~L~~~glI~~~FSl~l~~---------~~~G~i~fGg~d~~~- 146 (386)
+....+.+.....+|||||||+..++ ++++|++++.|+++||+||++ ...|.|+||++|+++
T Consensus 103 ~~~~~~~~~~~~~~dGilGLg~~~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~ 182 (383)
T 2ewy_A 103 IFESENFFLPGIKWNGILGLAYATLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLY 182 (383)
T ss_dssp EEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGC
T ss_pred EEeecceeeccCcCceEEecCchhcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhc
Confidence 87766655444467999999997653 678999998888899999963 247999999999865
Q ss_pred ---CeeeeeeecCCcceeEEEEEeEEEEcCeeecC--C---CceEEEeccccceeeCHHHHHHHHHHHHHhccccccccc
Q 016600 147 ---QQSTSFLASNGKYITYIIGVETCCIGSSCLKQ--T---SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE 218 (386)
Q Consensus 147 ---~~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~--~---~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~ 218 (386)
+.|+|++. ..+|.|.|++|.|+++.+.. . ...+||||||++++||+++|++|.++|............
T Consensus 183 ~g~l~~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~ 258 (383)
T 2ewy_A 183 KGDIWYTPIKE----EWYYQIEILKLEIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDG 258 (383)
T ss_dssp CSCEEEEECSS----BTTBBCCEEEEEETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHH
T ss_pred cCccEEEecCC----CceEEEEEEEEEECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccc
Confidence 45788753 36899999999999998753 2 357999999999999999999999999876542211110
Q ss_pred --ccccccccccccCCCCCCCeEEEEEcCC-----ceeeecCCeEEEEeec-ceeeEEEE--EEccCCCceEEcceeeee
Q 016600 219 --GYPWKCCYKSSSQRLPKLPSVKLMFPQN-----NSFVVNNPVFVIYGTQ-VVTGFCLA--IQPVDGDIGTIGQNFMTG 288 (386)
Q Consensus 219 --~~~~~~C~~~~~~~~~~~P~i~~~f~g~-----~~~~i~~~~y~~~~~~-~~~~~Cl~--i~~~~~~~~IlG~~fl~~ 288 (386)
..+...|+......+..+|+|+|+|.++ ..++|++++|++.... +.+..|++ +.+.+ +.||||+.|||+
T Consensus 259 ~~~~~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~C~~~~i~~~~-~~~ILG~~fl~~ 337 (383)
T 2ewy_A 259 FWTGSQLACWTNSETPWSYFPKISIYLRDENSSRSFRITILPQLYIQPMMGAGLNYECYRFGISPST-NALVIGATVMEG 337 (383)
T ss_dssp HHHTSEEEEECSSSCGGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCCTTCSEEEEESEEEES-SCEEECHHHHTT
T ss_pred cccccccccccCCcccHhhCCcEEEEECCCCCCceEEEEEChHHheeecccCCCCceeEEEEecCCC-CcEEEChHHhCC
Confidence 1235689876655566799999999764 2689999999987632 12457875 45443 679999999999
Q ss_pred EEEEEecCCCEEEEEcCCCCCCCCCCcccCCCC
Q 016600 289 YRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPG 321 (386)
Q Consensus 289 ~yvvFD~e~~rIGfa~~~C~~~~~~~~~~~~~~ 321 (386)
+|+|||++++|||||+++|....+.+++++.+|
T Consensus 338 ~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i~g~ 370 (383)
T 2ewy_A 338 FYVIFDRAQKRVGFAASPCAEIAGAAVSEISGP 370 (383)
T ss_dssp EEEEEETTTTEEEEEECTTCBSSSCBCEEEEEE
T ss_pred eeEEEECCCCeEEEEeccCCCcCCcceeeecCC
Confidence 999999999999999999998777777888654
No 15
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=9.7e-44 Score=346.00 Aligned_cols=265 Identities=20% Similarity=0.340 Sum_probs=211.7
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+.+. |.|.+.|++| +.++|.+++|+|+|++. .+.++.|
T Consensus 59 C~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~g-s~~~G~~~~D~v~ig~~--------~v~~~~f 111 (342)
T 3pvk_A 59 CKQKGTYDPSGSSASQDLN------------------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVL 111 (342)
T ss_dssp GGTTCCBCGGGCTTCEEEE------------------EEEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred CCCCCcCCCccCcceeecC------------------CeEEEEecCC-CeEEEEEEEEEEEECCE--------EecceEE
Confidence 3457899999999999854 8999999998 77999999999999985 5678999
Q ss_pred eeeeeccCCCCCCCCCceEEecCCCC-------CChHHHHHhcCCC-CCeEEEeecCC--CCceEEECCCCCCC----Ce
Q 016600 83 GCGMKQSGGYLDGVAPDGLIGLGLGE-------ISVPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQ 148 (386)
Q Consensus 83 g~~~~~~g~~~~~~~~dGIlGLg~~~-------~S~~~~L~~~glI-~~~FSl~l~~~--~~G~i~fGg~d~~~----~~ 148 (386)
||++... ..+||||||+.. .+++++|+++|+| +++||+||++. ..|.|+|||+|+++ +.
T Consensus 112 g~~~~~~-------~~~GilGLg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~ 184 (342)
T 3pvk_A 112 ADVDSTS-------IDQGILGVGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLI 184 (342)
T ss_dssp EEEEEES-------SSSCEEECSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCE
T ss_pred EEEEccC-------CCccEEEecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeE
Confidence 9998764 358999999986 3689999999999 89999999874 36999999999876 45
Q ss_pred eeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccc
Q 016600 149 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKS 228 (386)
Q Consensus 149 ~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~ 228 (386)
++|++. ..+|.|.|++|.|+++.+......+||||||++++||++++++|.++|........ .....+...|+
T Consensus 185 ~~p~~~----~~~~~v~l~~i~v~g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~-~~~~~~~~~C~-- 257 (342)
T 3pvk_A 185 ALPVTS----DRELRISLGSVEVSGKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKLTQDS-NGNSFYEVDCN-- 257 (342)
T ss_dssp EEECCC----SSSCEEEEEEEEETTEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEEEECT-TSCEEEEECSC--
T ss_pred EeecCc----cceEEEEEeEEEECCEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCeecccC-CCceEEEEecC--
Confidence 788753 24899999999999999876567899999999999999999999888744322110 00112334554
Q ss_pred ccCCCCCCCeEEEEEcCCceeeecCCeEEEEeec--c-eeeEEE-EEEccCCCceEEcceeeeeEEEEEecCCCEEEEEc
Q 016600 229 SSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQ--V-VTGFCL-AIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSH 304 (386)
Q Consensus 229 ~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~--~-~~~~Cl-~i~~~~~~~~IlG~~fl~~~yvvFD~e~~rIGfa~ 304 (386)
..|+|+|+|.++..++|++++|++.... + ....|+ ++... +.||||+.|||++|+|||++++|||||+
T Consensus 258 ------~~p~i~f~f~~g~~~~vp~~~~~~~~~~~~g~~~~~C~~~i~~~--~~~ilG~~fl~~~y~vfD~~~~~igfA~ 329 (342)
T 3pvk_A 258 ------LSGDVVFNFSKNAKISVPASEFAASLQGDDGQPYDKCQLLFDVN--DANILGDNFLRSAYIVYDLDDNEISLAQ 329 (342)
T ss_dssp ------CCSEEEEEESTTCEEEEEGGGGEEC----------CEEESEEEC--TTCEECHHHHTTEEEEEETTTTEEEEEE
T ss_pred ------CCCceEEEECCCCEEEEcHHHheeeccccCCCcCCeeEEEEeeC--CCeEeCHHHHhcEEEEEECCCCEEEEEe
Confidence 3599999997688999999999987422 1 125686 56553 6899999999999999999999999999
Q ss_pred CCCCCCCCCCcccC
Q 016600 305 SNCQDLNDGTKSPL 318 (386)
Q Consensus 305 ~~C~~~~~~~~~~~ 318 (386)
++|++.+ +++++
T Consensus 330 ~~~~~~s--~iv~i 341 (342)
T 3pvk_A 330 VKYTSAS--SISAL 341 (342)
T ss_dssp BCCCSCC--CEEEC
T ss_pred cCCCCCC--CEEEe
Confidence 9998533 34554
No 16
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.1e-43 Score=343.63 Aligned_cols=256 Identities=23% Similarity=0.365 Sum_probs=209.6
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+.. .|.|.++|++| +.++|.+++|+|+|++. .+.++.||
T Consensus 53 ~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg 105 (325)
T 2apr_A 53 SGQTKYDPNQSSTYQAD------------------GRTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIE 105 (325)
T ss_dssp TTSCCBCGGGCTTCEEE------------------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred cCCCCCCcccCCCeeeC------------------CCEEEEEECCC-CCEEEEEEEEEEEECCE--------EECcEEEE
Confidence 45778888888888873 38999999998 67999999999999975 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC-------hHHHHHhcCCC-CCeEEEeecC---CCCceEEECCCCCCC----Ce
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS-------VPSLLAKAGLI-RNSFSMCFDK---DDSGRIFFGDQGPAT----QQ 148 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S-------~~~~L~~~glI-~~~FSl~l~~---~~~G~i~fGg~d~~~----~~ 148 (386)
|+..+++.+... .+|||||||+..++ ++++|+++|+| +++||+||++ ...|.|+||++|+++ +.
T Consensus 106 ~~~~~~~~f~~~-~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~ 184 (325)
T 2apr_A 106 LAKREAASFASG-PNDGLLGLGFDTITTVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLT 184 (325)
T ss_dssp EEEEECHHHHTS-SCSEEEECSCGGGCSSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCE
T ss_pred EEeccCcccccC-CCceEEEeCCcccccccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceE
Confidence 999876654333 37999999998653 78999999999 8999999964 357999999999865 56
Q ss_pred eeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccc
Q 016600 149 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKS 228 (386)
Q Consensus 149 ~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~ 228 (386)
|+|+.. ...+|.|.+++|.||+ .+....+.+||||||++++||+++|++++++|.+++... ..+...|+.
T Consensus 185 ~~p~~~---~~~~~~v~l~~i~vg~-~~~~~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~~-----g~~~~~C~~- 254 (325)
T 2apr_A 185 TVPIDN---SRGWWGITVDRATVGT-STVASSFDGILDTGTTLLILPNNIAASVARAYGASDNGD-----GTYTISCDT- 254 (325)
T ss_dssp EEECBC---TTSSCEEEECEEEETT-EEEECCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECSS-----SCEEECSCG-
T ss_pred EEEccC---CCCEEEEEEeEEEECC-EecCCCceEEEecCCccEECCHHHHHHHHHHHhcccCCC-----CeEEEECCC-
Confidence 888853 2468999999999999 444467799999999999999999999999987655432 233446763
Q ss_pred ccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEE-EEccCCCceEEcceeeeeEEEEEecCCCEEEEEcCC
Q 016600 229 SSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 306 (386)
Q Consensus 229 ~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~~~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~~ 306 (386)
..+|+|+|+|.| ..+.|++++|++... +..|++ |+..+.+.||||+.|||++|+|||++++|||||+.+
T Consensus 255 -----~~~p~i~f~f~g-~~~~ip~~~~~~~~~---~~~C~~~i~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 324 (325)
T 2apr_A 255 -----SAFKPLVFSING-ASFQVSPDSLVFEEF---QGQCIAGFGYGNWGFAIIGDTFLKNNYVVFNQGVPEVQIAPVA 324 (325)
T ss_dssp -----GGCCCEEEEETT-EEEEECGGGGEEEEE---TTEEEESEEEESSSSEEECHHHHTTEEEEEETTTTEEEEEEBC
T ss_pred -----CCCCcEEEEECC-EEEEECHHHEEEcCC---CCeEEEEEEcCCCCCEEECHHHhcceEEEEECCCCEEEEEecC
Confidence 248999999954 599999999988654 567875 565545789999999999999999999999999863
No 17
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=5.8e-44 Score=346.04 Aligned_cols=256 Identities=21% Similarity=0.363 Sum_probs=210.7
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+.. .|.|.++|++| +++|.+++|+|+|++. ...++.||
T Consensus 51 ~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~g--s~~G~~~~D~v~~g~~--------~~~~~~fg 102 (329)
T 1htr_B 51 TSHSRFNPSESSTYSTN------------------GQTFSLQYGSG--SLTGFFGYDTLTVQSI--------QVPNQEFG 102 (329)
T ss_dssp HTSCCBCGGGCTTCEEE------------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred CCCCcCCCccCCCeEEC------------------CcEEEEEeCCC--CeEEEEEeeeEEEcce--------EECceEEE
Confidence 34678999999999874 38999999998 5699999999999875 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCCC---CceEEECCCCCCC----Cee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD---SGRIFFGDQGPAT----QQS 149 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~~---~G~i~fGg~d~~~----~~~ 149 (386)
|+..+.+..+....+|||||||+..++ ++++|+++|+| +++||+||++.. .|.|+||++|+++ +.|
T Consensus 103 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~ 182 (329)
T 1htr_B 103 LSENEPGTNFVYAQFDGIMGLAYPALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYW 182 (329)
T ss_dssp EESSCSSGGGGGCSCCEEEECCCCSCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEE
T ss_pred EEEEccccccccCCCceEEecCCCcccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEE
Confidence 999887654443457999999998764 78999999999 899999999864 7999999999876 357
Q ss_pred eeeeecCCcceeEEEEEeEEEEcCeeec--CCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccccc
Q 016600 150 TSFLASNGKYITYIIGVETCCIGSSCLK--QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYK 227 (386)
Q Consensus 150 ~p~v~~~~~~~~y~V~l~~i~v~~~~~~--~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~ 227 (386)
+|+.. ..+|.|.+++|.|+++.+. .....+||||||++++||+++|++|.+++.... . ....+...|+.
T Consensus 183 ~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~----~-~~g~~~~~C~~ 253 (329)
T 1htr_B 183 APVTQ----ELYWQIGIEEFLIGGQASGWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE----D-EYGQFLVNCNS 253 (329)
T ss_dssp EEBCS----SSSCEEEECEEEETTEECCTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE----C-TTSCEEECGGG
T ss_pred EECCC----CceEEEEEeEEEECCceeeecCCCceEEEecCCccEECCHHHHHHHHHHhCCee----c-CCCeEEEeCCC
Confidence 77752 3699999999999998864 356789999999999999999999998874422 1 12233456765
Q ss_pred cccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC-----CC-ceEEcceeeeeEEEEEecCCCEE
Q 016600 228 SSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD-----GD-IGTIGQNFMTGYRVVFDRENLKL 300 (386)
Q Consensus 228 ~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~-~~IlG~~fl~~~yvvFD~e~~rI 300 (386)
. ..+|+|+|+| +|..++|++++|++... + .|+ +|+..+ ++ .||||+.|||++|+|||++++||
T Consensus 254 ~-----~~~P~i~f~f-~g~~~~i~~~~y~~~~~---g-~C~~~~~~~~~~~~~~~~~~iLG~~fl~~~yvvfD~~~~~i 323 (329)
T 1htr_B 254 I-----QNLPSLTFII-NGVEFPLPPSSYILSNN---G-YCTVGVEPTYLSSQNGQPLWILGDVFLRSYYSVYDLGNNRV 323 (329)
T ss_dssp G-----GGSCCEEEEE-TTEEEEECHHHHEEECS---S-CEEESEEEECCCCTTSSCEEEECHHHHTTEEEEEETTTTEE
T ss_pred c-----ccCCcEEEEE-CCEEEEECHHHhcccCC---C-EEEEEEEECCCCCCCCCceEEEChHHhccEEEEEECCCCEE
Confidence 3 4789999999 78999999999998765 3 787 677542 34 89999999999999999999999
Q ss_pred EEEcCC
Q 016600 301 GWSHSN 306 (386)
Q Consensus 301 Gfa~~~ 306 (386)
|||+++
T Consensus 324 gfa~~~ 329 (329)
T 1htr_B 324 GFATAA 329 (329)
T ss_dssp EEEEEC
T ss_pred EEEeCC
Confidence 999864
No 18
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.5e-43 Score=341.67 Aligned_cols=260 Identities=20% Similarity=0.267 Sum_probs=209.7
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+.++ .|.|.++|++| +.++|.+++|+|+|++. .+.++.||
T Consensus 54 ~~~~~y~~~~SsT~~~~~-----------------~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg 107 (329)
T 3c9x_A 54 TGHAIYTPSKSSTSKKVS-----------------GASWSISYGDG-SSSSGDVYTDKVTIGGF--------SVNTQGVE 107 (329)
T ss_dssp TTSCCBCGGGCTTCEECT-----------------TCBEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred CCCCcCCcccCcCceEcC-----------------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEcceEEE
Confidence 467899999999999864 28999999998 66999999999999975 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC---------hHHHHHhcCCC-CCeEEEeecCCCCceEEECCCCCCC----Cee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS---------VPSLLAKAGLI-RNSFSMCFDKDDSGRIFFGDQGPAT----QQS 149 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S---------~~~~L~~~glI-~~~FSl~l~~~~~G~i~fGg~d~~~----~~~ 149 (386)
|++.+++.+.....+|||||||+..++ ++++|+++ | +++||+||.+...|.|+||++|+++ +.|
T Consensus 108 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~ 185 (329)
T 3c9x_A 108 SATRVSTEFVQDTVISGLVGLAFDSGNQVRPHPQKTWFSNAASS--LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAY 185 (329)
T ss_dssp EEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHHTT--SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEE
T ss_pred EEEecCccccccCCCceeEEeCcccccccCCCCCCCHHHHHHHh--cCCCEEEEEecCCCCcEEEEeCcChhhcccceEE
Confidence 999877654332356999999997543 67889875 6 8999999998778999999999875 458
Q ss_pred eeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccccccc
Q 016600 150 TSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSS 229 (386)
Q Consensus 150 ~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~ 229 (386)
+|++. ...+|.|.|++|.|+++.+....+.+||||||++++||++++++|.++|.. .........+...|+
T Consensus 186 ~p~~~---~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lp~~~~~~i~~~i~~---a~~~~~~~~~~~~C~--- 256 (329)
T 3c9x_A 186 TPVDN---SQGFWEFTASGYSVGGGKLNRNSIDGIADTGTTLLLLDDNVVDAYYANVQS---AQYDNQQEGVVFDCD--- 256 (329)
T ss_dssp EECBC---TTSSCEEEECCEEETTCCCCSCCEEEEECTTCCSEEECHHHHHHHHTTCTT---CEEETTTTEEEEETT---
T ss_pred EEccC---CCceEEEEEeeEEECCEeccCCCceEEEECCCCcEeCCHHHHHHHHHhCCC---cEEcCCCCEEEEECC---
Confidence 88853 246899999999999998876778999999999999999999998766522 111111122334676
Q ss_pred cCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEE-EEccC-CCceEEcceeeeeEEEEEecCCCEEEEEcC
Q 016600 230 SQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 305 (386)
Q Consensus 230 ~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~ 305 (386)
..+|+|+|+| +|..++|++++|++.........|++ |+..+ .+.||||+.|||++|+|||++++|||||+.
T Consensus 257 ----~~~P~i~f~f-~g~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 329 (329)
T 3c9x_A 257 ----EDLPSFSFGV-GSSTITIPGDLLNLTPLEEGSSTCFGGLQSSSGIGINIFGDVALKAALVVFDLGNERLGWAQK 329 (329)
T ss_dssp ----CCCCCEEEEE-TTEEEEECGGGGEEEESSTTCSEEEESEEECTTTTSEEECHHHHTTEEEEEETTTTEEEEEEC
T ss_pred ----CCCCcEEEEE-CCEEEEECHHHeeeeccCCCCCeEEEEEEcCCCCCcEEEChHHhccEEEEEECCCCEEeEecC
Confidence 3689999999 57999999999988753222468976 66654 468999999999999999999999999974
No 19
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=1.8e-43 Score=357.12 Aligned_cols=288 Identities=20% Similarity=0.227 Sum_probs=229.6
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+.+. |.|.++|++| +++|.+++|+|+|++.. .....+.|+
T Consensus 109 ~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~G--s~~G~~~~Dtv~ig~~~------~~~~~~~~~ 162 (455)
T 3lpj_A 109 FLHRYYQRQLSSTYRDLR------------------KGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIA 162 (455)
T ss_dssp TCSCCCCGGGCTTCEEEE------------------EEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEE
T ss_pred ccCCcccCCCCCCcccCC------------------ccEEEEeCCe--EEEEEEEEEEEEECCCc------ceeeEEEEE
Confidence 457899999999999854 8999999998 57999999999998631 122346789
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCC--------ChHHHHHhcCCCCCeEEEeecC------------CCCceEEECCCC
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEI--------SVPSLLAKAGLIRNSFSMCFDK------------DDSGRIFFGDQG 143 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~--------S~~~~L~~~glI~~~FSl~l~~------------~~~G~i~fGg~d 143 (386)
|+....+.+.....+|||||||+..+ +++++|+++++|.++||+||++ ...|.|+||++|
T Consensus 163 ~~~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d 242 (455)
T 3lpj_A 163 AITESDKFFINGSNWEGILGLAYAEIARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGID 242 (455)
T ss_dssp EEEEEESCSCTTCCCCEEEECSCGGGCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCC
T ss_pred EEEccCcccccCCCcceEEEeCccccccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcC
Confidence 98887766655456799999998754 4788999999998899999974 247999999999
Q ss_pred CCCC----eeeeeeecCCcceeEEEEEeEEEEcCeeecCC-----CceEEEeccccceeeCHHHHHHHHHHHHHhccccc
Q 016600 144 PATQ----QSTSFLASNGKYITYIIGVETCCIGSSCLKQT-----SFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTI 214 (386)
Q Consensus 144 ~~~~----~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~-----~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~ 214 (386)
++++ .|+|+.. ..+|.|.+++|.|+++.+... ...+||||||++++||++++++|.++|........
T Consensus 243 ~~~~~g~l~~~p~~~----~~~w~v~l~~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~ 318 (455)
T 3lpj_A 243 HSLYTGSLWYTPIRR----EWYYEVIIVRVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEK 318 (455)
T ss_dssp GGGEEEEEEEEECCS----BTTBBCCEEEEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSC
T ss_pred cccccCceEEEecCC----CceeEEEEeEEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccc
Confidence 9764 4677643 478999999999999988632 45799999999999999999999999988654221
Q ss_pred ccc--cccccccccccccCCCCCCCeEEEEEcCCc-----eeeecCCeEEEEeecce--eeEEEEEEc-cCCCceEEcce
Q 016600 215 TSF--EGYPWKCCYKSSSQRLPKLPSVKLMFPQNN-----SFVVNNPVFVIYGTQVV--TGFCLAIQP-VDGDIGTIGQN 284 (386)
Q Consensus 215 ~~~--~~~~~~~C~~~~~~~~~~~P~i~~~f~g~~-----~~~i~~~~y~~~~~~~~--~~~Cl~i~~-~~~~~~IlG~~ 284 (386)
... ...+...|+......+..+|+|+|+|.++. .++|++++|++...... ...|+++.. ...+.||||+.
T Consensus 319 ~~~~~~~g~~~~C~~~~~~~~~~~P~i~f~f~g~~~~~~~~~~l~~~~yi~~~~~~~~~~~~C~~f~~~~~~~~~ILG~~ 398 (455)
T 3lpj_A 319 FPDGFWLGEQLVCWQAGTTPWNIFPVISLYLMGEVTNQSFRITILPQQYLRPVEDVATSQDDCYKFAISQSSTGTVMGAV 398 (455)
T ss_dssp CCHHHHTTCSCEEESTTCCCGGGSCCEEEEEECSSTTEEEEEEECHHHHEEEECCTTCCSCEEEEECEEEESSCEEECHH
T ss_pred cCcccccCcceecccccCCchhcCCcEEEEEcCCCcCceEEEEECHHHheEeccCCCCCCceEEEEeccCCCCcEEEChH
Confidence 111 112357899877666777999999997654 58999999998765421 257986322 12468999999
Q ss_pred eeeeEEEEEecCCCEEEEEcCCCCCCCCCCcccCCCC
Q 016600 285 FMTGYRVVFDRENLKLGWSHSNCQDLNDGTKSPLTPG 321 (386)
Q Consensus 285 fl~~~yvvFD~e~~rIGfa~~~C~~~~~~~~~~~~~~ 321 (386)
|||++|+|||++++|||||+++|...++.+++++.+|
T Consensus 399 fl~~~yvvfD~~~~rIGfA~~~c~~~~~~~i~~i~g~ 435 (455)
T 3lpj_A 399 IMEGFYVVFDRARKRIGFAVSACHVHDEFRTAAVEGP 435 (455)
T ss_dssp HHTTEEEEEETTTTEEEEEEETTCCCCSSCCCEEEEE
T ss_pred HhCCeEEEEECCCCEEEEEecccccccccCcceecCC
Confidence 9999999999999999999999998887777777765
No 20
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=1.1e-43 Score=349.52 Aligned_cols=257 Identities=21% Similarity=0.359 Sum_probs=208.2
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+.. .|.|.++|++| +++|.+++|+|+|++. .+.++.|
T Consensus 94 C~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~F 145 (370)
T 3psg_A 94 CSDHNQFNPDDSSTFEAT------------------SQELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIF 145 (370)
T ss_dssp GTTSCCBCGGGCTTCEEE------------------EEEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred cCCCCCCCCccCcCcEEC------------------CcEEEEEeCCc--eEEEEEEEEEEeeCCc--------ccCCeEE
Confidence 456778888888888874 38999999998 5999999999999985 6689999
Q ss_pred eeeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC--CCceEEECCCCCCC----Cee
Q 016600 83 GCGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----QQS 149 (386)
Q Consensus 83 g~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~--~~G~i~fGg~d~~~----~~~ 149 (386)
||+..+.+.......+|||||||++.++ ++++|+++|+| +++||+||++. ..|.|+|||+|+++ +.|
T Consensus 146 g~a~~~~~~~~~~~~~dGIlGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~ 225 (370)
T 3psg_A 146 GLSETEPGSFLYYAPFDGILGLAYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNW 225 (370)
T ss_dssp EEECSCCCGGGGGCSCSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEE
T ss_pred EEEEeecccccccCCccceeccCCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCccee
Confidence 9999887654444567999999998664 68899999999 89999999985 47999999999865 568
Q ss_pred eeeeecCCcceeEEEEEeEEEEcCeeec-CCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccc
Q 016600 150 TSFLASNGKYITYIIGVETCCIGSSCLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKS 228 (386)
Q Consensus 150 ~p~v~~~~~~~~y~V~l~~i~v~~~~~~-~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~ 228 (386)
+|+.. ..+|.|.+++|.|+++.+. .....+||||||+++++|++++++|.++|... . ...+.+...|.
T Consensus 226 ~pv~~----~~~w~v~l~~i~v~g~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~----~-~~~g~~~v~C~-- 294 (370)
T 3psg_A 226 VPVSV----EGYWQITLDSITMDGETIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIGAS----E-NSDGEMVISCS-- 294 (370)
T ss_dssp EECSE----ETTEEEEECEEESSSSEEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTTCE----E-CTTCCEECCGG--
T ss_pred ecccc----cceeEEEEeEEEECCEEEecCCCceEEEcCCCCcEECCHHHHHHHHHHhCCc----c-cCCCcEEEECC--
Confidence 88753 3689999999999998775 35678999999999999999999988877432 1 11222333454
Q ss_pred ccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC-----CCceEEcceeeeeEEEEEecCCCEEEE
Q 016600 229 SSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGW 302 (386)
Q Consensus 229 ~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~-----~~~~IlG~~fl~~~yvvFD~e~~rIGf 302 (386)
....+|+|+|+| +|..++|++++|++. . +..|+ +++..+ ++.||||+.|||++|+|||++|+||||
T Consensus 295 ---~~~~lP~i~f~~-~g~~~~l~~~~yi~~-~---~~~C~~~~~~~~~~~~~~~~~ILG~~Fl~~~y~vfD~~~~riGf 366 (370)
T 3psg_A 295 ---SIDSLPDIVFTI-DGVQYPLSPSAYILQ-D---DDSCTSGFEGMDVPTSSGELWILGDVFIRQYYTVFDRANNKVGL 366 (370)
T ss_dssp ---GGGGCCCEEEEE-TTEEEEECHHHHEEE-C---SSCEEESEEEECCCTTSCCEEEECHHHHTTEEEEEETTTTEEEE
T ss_pred ---CcccCCcEEEEE-CCEEEEECHHHhccc-C---CCEEEEEEEeCCCCCCCCCcEEeChHHhcceEEEEECCCCEEEE
Confidence 445799999999 789999999999998 2 33586 566532 346999999999999999999999999
Q ss_pred EcCC
Q 016600 303 SHSN 306 (386)
Q Consensus 303 a~~~ 306 (386)
|+++
T Consensus 367 A~a~ 370 (370)
T 3psg_A 367 APVA 370 (370)
T ss_dssp EEBC
T ss_pred EEcC
Confidence 9873
No 21
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=1.4e-43 Score=342.47 Aligned_cols=256 Identities=20% Similarity=0.339 Sum_probs=208.4
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+... |.|.++|++| +++|.+++|+|+|++. ...++.||
T Consensus 53 ~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg 104 (323)
T 3cms_A 53 KNHQRFDPRKSSTFQNLG------------------KPLSIHYGTG--SMQGILGYDTVTVSNI--------VDIQQTVG 104 (323)
T ss_dssp HTSCCBCGGGCTTCEEEE------------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred cCCCCCCCccCCCeEECC------------------cEEEEEeCCC--CeEEEEEEEEEEECCe--------EEeccEEE
Confidence 356789999999998843 8999999998 5899999999999875 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC-CCceEEECCCCCCC----Ceeee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPAT----QQSTS 151 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~-~~G~i~fGg~d~~~----~~~~p 151 (386)
|+..+.+..+....+|||||||++.++ ++++|+++|+| +++||+||++. ..|.|+||++|+++ +.|+|
T Consensus 105 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p 184 (323)
T 3cms_A 105 LSTQEPGDFFTYAEFDGILGMAYPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVP 184 (323)
T ss_dssp EEEECCSHHHHHSSCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEE
T ss_pred EEEecccccccccCCceEEecCcchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEE
Confidence 999876532222256999999998654 78999999999 89999999975 35999999999876 35777
Q ss_pred eeecCCcceeEEEEEeEEEEcCeeec-CCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 016600 152 FLASNGKYITYIIGVETCCIGSSCLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS 230 (386)
Q Consensus 152 ~v~~~~~~~~y~V~l~~i~v~~~~~~-~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~ 230 (386)
+.. ..+|.|.|++|.|+++.+. .....+||||||++++||++++++|.+++... .. ....+...|+.
T Consensus 185 ~~~----~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~----~~-~~g~~~~~C~~--- 252 (323)
T 3cms_A 185 VTV----QQYWQFTVDSVTISGVVVACEGGCQAILDTGTSKLVGPSSDILNIQQAIGAT----QN-QYGEFDIDCDN--- 252 (323)
T ss_dssp CSS----BTTBEEEEEEEEETTEEEESTTCEEEEECTTCCSEEECHHHHHHHHHHHTCE----EE-TTTEEEECTTC---
T ss_pred Ccc----CCeEEEEEeeEEECCEEeecCCCcEEEEecCCccEeCCHHHHHHHHHHhCCe----ec-CCCcEEEECCC---
Confidence 742 3689999999999998875 35678999999999999999999998887432 11 11223345553
Q ss_pred CCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC-CCceEEcceeeeeEEEEEecCCCEEEEEcCC
Q 016600 231 QRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 306 (386)
Q Consensus 231 ~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~~ 306 (386)
...+|+|+|+| ++..++|++++|++.. +..|+ +|+..+ .+.||||+.|||++|+|||++++|||||+++
T Consensus 253 --~~~~P~i~f~f-~g~~~~i~~~~y~~~~----~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~ 323 (323)
T 3cms_A 253 --LSYMPTVVFEI-NGKMYPLTPSAYTSQD----QGFCTSGFQSENHSQKWILGDVFIREYYSVFDRANNLVGLAKAI 323 (323)
T ss_dssp --TTTSCCEEEEE-TTEEEEECHHHHEEEE----TTEEEESEEEC---CCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CccCceEEEEE-CCEEEEECHHHhccCC----CCEEEEEEEeCCCCCcEEECHHHhhceEEEEECCCCEEEEEECC
Confidence 45799999999 7799999999999882 56787 587753 5789999999999999999999999999864
No 22
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=1.3e-43 Score=342.11 Aligned_cols=256 Identities=22% Similarity=0.356 Sum_probs=210.3
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+... |.|.+.|++| +++|.+++|+|+|++. .+.++.||
T Consensus 50 ~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v~~~~fg 101 (320)
T 4aa9_A 50 KNHHRFDPRKSSTFRNLG------------------KPLSIHYGTG--SMEGFLGYDTVTVSNI--------VDPNQTVG 101 (320)
T ss_dssp HTSCCBCGGGCTTCEEEE------------------EEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred CCCCCCCCCCCcCeEcCC------------------cEEEEEECCc--EEEEEEEEEEEEECCE--------eecCeEEE
Confidence 357889999999999853 8999999998 5899999999999985 56899999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC-CCceEEECCCCCCCC----eeee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD-DSGRIFFGDQGPATQ----QSTS 151 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~-~~G~i~fGg~d~~~~----~~~p 151 (386)
|+..+.+..+....++||||||+..++ ++++|+++|+| +++||+||++. ..|.|+||++|++++ .|+|
T Consensus 102 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p 181 (320)
T 4aa9_A 102 LSTEQPGEVFTYSEFDGILGLAYPSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVP 181 (320)
T ss_dssp EEEECCSHHHHSCCCSEEEECSCGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEE
T ss_pred EEEEcccccccccCcccEEecCcccccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEE
Confidence 999887643333457999999987543 78999999999 99999999985 689999999999864 4777
Q ss_pred eeecCCcceeEEEEEeEEEEcCeeecC-CCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 016600 152 FLASNGKYITYIIGVETCCIGSSCLKQ-TSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS 230 (386)
Q Consensus 152 ~v~~~~~~~~y~V~l~~i~v~~~~~~~-~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~ 230 (386)
+. ...+|.|.+++|.|+++.+.. ....+||||||++++||++++++|.+++... .. ....+...|+.
T Consensus 182 ~~----~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~----~~-~~g~~~~~C~~--- 249 (320)
T 4aa9_A 182 VT----LQQYWQFTVDSVTINGVAVACVGGCQAILDTGTSVLFGPSSDILKIQMAIGAT----EN-RYGEFDVNCGN--- 249 (320)
T ss_dssp CS----SBTTBEEEECEEEETTEEEESTTCEEEEECTTCSSEEEEHHHHHHHHHHTTCE----EC-TTSCEEECGGG---
T ss_pred cc----cCCceEEEEeEEEECCEEeccCCCcEEEEECCCCcEECCHHHHHHHHHHhCCc----cc-CCCcEEEeCCC---
Confidence 64 247899999999999988763 4678999999999999999999998877332 11 12233345554
Q ss_pred CCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC-CCceEEcceeeeeEEEEEecCCCEEEEEcCC
Q 016600 231 QRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 306 (386)
Q Consensus 231 ~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~-~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~~ 306 (386)
...+|+|+|+| ++..++|++++|+... +..|+ +|+... ++.||||+.|||++|+|||++++|||||+++
T Consensus 250 --~~~~p~i~f~f-~g~~~~l~~~~y~~~~----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~~igfA~a~ 320 (320)
T 4aa9_A 250 --LRSMPTVVFEI-NGRDYPLSPSAYTSKD----QGFCTSGFQGDNNSELWILGDVFIREYYSVFDRANNRVGLAKAI 320 (320)
T ss_dssp --GGGCCCEEEEE-TTEEEEECHHHHEEEE----TTEEEESEEEETTCCCEEECHHHHTTEEEEEETTTTEEEEEEEC
T ss_pred --CCcCceEEEEE-CCEEEEECHHHhccCC----CCeEEEEEEcCCCCCcEEEChHHhcceEEEEECCCCEEEEEecC
Confidence 35789999999 6899999999999763 45787 577643 4679999999999999999999999999864
No 23
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=6.7e-43 Score=338.10 Aligned_cols=259 Identities=20% Similarity=0.289 Sum_probs=205.5
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+ ++. +.|.|.++|++| +.++|.+++|+|+|++. .+.++.||
T Consensus 51 ~~~~~y~~~~Ss-~~~------------------~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg 102 (325)
T 1ibq_A 51 TGHDLYTPSSSA-TKL------------------SGYSWDISYGDG-SSASGDVYRDTVTVGGV--------TTNKQAVE 102 (325)
T ss_dssp TTSCCCBCCSSC-EEC------------------TTCBEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred CCCCCCCchhcC-Ccc------------------CCCEEEEEeCCC-CEEEEEEEEeEEEECCE--------EEcceEEE
Confidence 346677777766 332 358999999998 66999999999999975 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC---------hHHHHHhcCCCCCeEEEeecCCCCceEEECCCCCCC----Ceee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS---------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPAT----QQST 150 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S---------~~~~L~~~glI~~~FSl~l~~~~~G~i~fGg~d~~~----~~~~ 150 (386)
|++.+++.+.....+|||||||+..++ ++++|+++ +.+++||+||.+...|.|+||++|+++ +.|+
T Consensus 103 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~ 181 (325)
T 1ibq_A 103 AASKISSEFVQDTANDGLLGLAFSSINTVQPKAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYT 181 (325)
T ss_dssp EEEEECHHHHTSTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEE
T ss_pred EEEecCccccccCCCceEEEeCcccccccCcCCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEE
Confidence 999887655443457999999997654 57899886 338999999998768999999999865 5688
Q ss_pred eeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 016600 151 SFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS 230 (386)
Q Consensus 151 p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~ 230 (386)
|++. ...+|.|.+++|.|+++.+......+||||||++++||++++++|.++|.. .........+...|+
T Consensus 182 p~~~---~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~---a~~~~~~g~~~~~C~---- 251 (325)
T 1ibq_A 182 DADS---SQGYWGFSTDGYSIGDGSSSSSGFSAIADTGTTLILLDDEIVSAYYEQVSG---AQESYEAGGYVFSCS---- 251 (325)
T ss_dssp ECBC---TTSSCEEEECEEEETTSCCBSCCEEEEECTTCCSEEECHHHHHHHHTTSTT---CBCCSSSSSCEEETT----
T ss_pred EcCC---CCceEEEEECcEEECCeeccCCCceEEEeCCCCcEeCCHHHHHHHHHhCCC---ceEcCcCCeEEEEcC----
Confidence 8853 246899999999999998876678999999999999999999998876522 111111223334565
Q ss_pred CCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEE-EEccC-CCceEEcceeeeeEEEEEecCCCEEEEEcC
Q 016600 231 QRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 305 (386)
Q Consensus 231 ~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~ 305 (386)
..+|+|+|+| ++..++|++++|++.........|++ ++..+ .+.||||+.|||++|+|||++++|||||++
T Consensus 252 ---~~~P~i~f~f-gg~~~~i~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~ 324 (325)
T 1ibq_A 252 ---TDLPDFTVVI-GDYKAVVPGKYINYAPVSTGSSTCYGGIQSNSGLGLSILGDVFLKSQYVVFNSEGPKLGFAAQ 324 (325)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEECTTTCSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHhcccccCCCCCeEEEEEEcCCCCCceEEChHHhcCEEEEEECCCCEEEeeeC
Confidence 3689999999 78999999999988653212468876 66654 468999999999999999999999999986
No 24
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=4.8e-43 Score=339.68 Aligned_cols=259 Identities=22% Similarity=0.270 Sum_probs=208.1
Q ss_pred CCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEee
Q 016600 5 DLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGC 84 (386)
Q Consensus 5 ~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg~ 84 (386)
.++.|+|++|+||+.+.| |.|.++|++| +.++|.+++|+|+|++. .+.++.|||
T Consensus 54 ~~~~y~~~~SsT~~~~~~-----------------~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~ 107 (329)
T 1oew_A 54 XQTIYTPSKSTTAKLLSG-----------------ATWSISYGDG-SSSSGDVYTDTVSVGGL--------TVTGQAVES 107 (329)
T ss_dssp -CCCBCGGGCTTCEEEEE-----------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEE
T ss_pred ccCccCCccCccceecCC-----------------CeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEeeeEEEE
Confidence 467899999999998642 8999999998 66999999999999975 568899999
Q ss_pred eeeccCCCCCCCCCceEEecCCCCCC---------hHHHHHhcCCC-CCeEEEeecCCCCceEEECCCCCCC----Ceee
Q 016600 85 GMKQSGGYLDGVAPDGLIGLGLGEIS---------VPSLLAKAGLI-RNSFSMCFDKDDSGRIFFGDQGPAT----QQST 150 (386)
Q Consensus 85 ~~~~~g~~~~~~~~dGIlGLg~~~~S---------~~~~L~~~glI-~~~FSl~l~~~~~G~i~fGg~d~~~----~~~~ 150 (386)
++.+++.+.....+|||||||+..++ ++++|+++ | +++||+||.+...|.|+||++|+++ +.|+
T Consensus 108 ~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~ 185 (329)
T 1oew_A 108 AKKVSSSFTEDSTIDGLLGLAFSTLNTVSPTQQKTFFDNAKAS--LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYT 185 (329)
T ss_dssp EEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHTTT--SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEE
T ss_pred EEecCccccccCCCceEEEeccccccccCcCCCCCHHHHHHHh--ccCcEEEEEccCCCCeEEEEeccChHhcccceEEE
Confidence 99877654432356999999997544 67889876 6 8999999998778999999999875 4588
Q ss_pred eeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 016600 151 SFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS 230 (386)
Q Consensus 151 p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~ 230 (386)
|++. ...+|.|.|++|.|+++.+......+||||||++++||++++++|.++|.. .........+...|+
T Consensus 186 p~~~---~~~~~~v~l~~i~v~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~---a~~~~~~g~~~~~C~---- 255 (329)
T 1oew_A 186 AVST---KQGFWEWTSTGYAVGSGTFKSTSIDGIADTGTTLLYLPATVVSAYWAQVSG---AKSSSSVGGYVFPCS---- 255 (329)
T ss_dssp ECBC---TTSSCEEEEEEEEETTSCCEEEEEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETT----
T ss_pred EccC---CCceEEEEEeeEEECCeeccCCCceEEEeCCCCCEECCHHHHHHHHHhCCC---cEEcCCCCEEEEECC----
Confidence 8863 246899999999999988765567899999999999999999998776522 111111223335676
Q ss_pred CCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEE-EEccC-CCceEEcceeeeeEEEEEec-CCCEEEEEcC
Q 016600 231 QRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDR-ENLKLGWSHS 305 (386)
Q Consensus 231 ~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvvFD~-e~~rIGfa~~ 305 (386)
..+|+|+|+| +|..++|++++|++.........|++ |+..+ .+.||||+.|||++|+|||+ +++|||||+.
T Consensus 256 ---~~~P~i~f~f-gg~~~~ip~~~~~~~~~~~~~~~C~~~i~~~~~~~~~iLG~~fl~~~y~vfD~~~~~riGfA~~ 329 (329)
T 1oew_A 256 ---ATLPSFTFGV-GSARIVIPGDYIDFGPISTGSSSCFGGIQSSAGIGINIFGDVALKAAFVVFNGATTPTLGFASK 329 (329)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEESSTTCSEEEESEEESTTTSSEEECHHHHTTEEEEEECSSSCEEEEEEC
T ss_pred ---CCCCcEEEEE-CCEEEEECHHHeeeeecCCCCCeEEEEEEeCCCCCceEEChHHhcCEEEEEECCCCceEEEecC
Confidence 3689999999 78999999999988653222467876 66554 46899999999999999999 9999999974
No 25
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=2.8e-43 Score=341.46 Aligned_cols=254 Identities=20% Similarity=0.244 Sum_probs=207.0
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++| ||+.. .|.|.+.|++| +++|.+++|+|+|++. ...++.||
T Consensus 56 ~~~~~y~~~~S-T~~~~------------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~~~~~~fg 106 (330)
T 1yg9_A 56 PNLQKYEKLKP-KYISD------------------GNVQVKFFDTG--SAVGRGIEDSLTISQL--------TTSQQDIV 106 (330)
T ss_dssp TTCCCCCCSSC-EEEEE------------------EEEEEEETTTE--EEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred cccCccCCCCC-ceEEC------------------CCEEEEEECCc--eEEEEEEEEEEEECCE--------EEcCeEEE
Confidence 56778888888 88773 37999999998 5699999999999975 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC-------hHHHHHhcCCCCCeEEEeecCC--C--CceEEECCCCCCCC----e
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS-------VPSLLAKAGLIRNSFSMCFDKD--D--SGRIFFGDQGPATQ----Q 148 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S-------~~~~L~~~glI~~~FSl~l~~~--~--~G~i~fGg~d~~~~----~ 148 (386)
|++.+...+ ....+|||||||+..++ ++++|+++|+|+++||+||++. . .|.|+||++|++++ .
T Consensus 107 ~~~~~~~~f-~~~~~~GilGLg~~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~ 185 (330)
T 1yg9_A 107 LADELSQEV-CILSADVVVGIAAPGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFT 185 (330)
T ss_dssp EEEEECTHH-HHTTCSEEEECSCTTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEE
T ss_pred EEEEccccc-ccccCceEEEcCcchhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceE
Confidence 999873222 22356999999998776 8899999998899999999875 2 69999999999764 4
Q ss_pred eeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccc--cc-cccc
Q 016600 149 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEG--YP-WKCC 225 (386)
Q Consensus 149 ~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~--~~-~~~C 225 (386)
|+|+. ...+|.|.+++|.|+++.+......+||||||++++||++++++|.++|.... . ... .+ ...|
T Consensus 186 ~~p~~----~~~~w~v~l~~i~v~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~-~~g~~~~~~~~C 256 (330)
T 1yg9_A 186 YVPLV----GDDSWKFRLDGVKIGDTTVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGCVV----E-KTTTRRICKLDC 256 (330)
T ss_dssp EEEBS----CTTSCCEECSEEEETTEEEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTCEE----E-ECSSCEEEEECG
T ss_pred EEECC----CCCEEEEEeCeEEECCEEEcCCCcEEEEecCCccccCCHHHHHHHHHHhCCcc----c-CCCceEEEEEEC
Confidence 77774 24699999999999999876567789999999999999999999998874321 1 111 12 3345
Q ss_pred cccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEcc-CCCceEEcceeeeeEEEEEecCCCEEEEE
Q 016600 226 YKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV-DGDIGTIGQNFMTGYRVVFDRENLKLGWS 303 (386)
Q Consensus 226 ~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-~~~~~IlG~~fl~~~yvvFD~e~~rIGfa 303 (386)
+. ...+|+|+|+| ++..++|++++|++.. +..|+ +|+.. ..+.||||+.|||++|+|||++|+|||||
T Consensus 257 ~~-----~~~~p~i~f~f-gg~~~~l~~~~y~~~~----~~~C~~~i~~~~~~~~~ilG~~fl~~~y~vfD~~~~riGfA 326 (330)
T 1yg9_A 257 SK-----IPSLPDVTFVI-NGRNFNISSQYYIQQN----GNLCYSGFQPCGHSDHFFIGDFFVDHYYSEFNWENKTMGFG 326 (330)
T ss_dssp GG-----GGGSCCEEEEE-TTEEEEECHHHHEEEE----TTEEEESEEEETTCSSEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred CC-----ccccCcEEEEE-CCEEEEECHHHhcccC----CCcEEEEEEeCCCCCeEEecHHHhhheEEEEECCCCEEEEE
Confidence 43 45789999999 7899999999999876 45686 67654 34689999999999999999999999999
Q ss_pred cCC
Q 016600 304 HSN 306 (386)
Q Consensus 304 ~~~ 306 (386)
+++
T Consensus 327 ~~~ 329 (330)
T 1yg9_A 327 RSV 329 (330)
T ss_dssp EEC
T ss_pred ECC
Confidence 864
No 26
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=1.8e-43 Score=343.96 Aligned_cols=258 Identities=21% Similarity=0.364 Sum_probs=210.9
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+.. .|.|.+.|++| +++|.+++|+|+|++. .. ++.||
T Consensus 59 ~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v-~~~fg 109 (341)
T 3k1w_A 59 VYHKLFDASDSSSYKHN------------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TV-TQMFG 109 (341)
T ss_dssp HTSCCBCGGGCTTCEEE------------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EE-EEEEE
T ss_pred cCCCCCCCCcCcCeeEC------------------CCEEEEEECCc--EEEEEEEEEEEEECCc--------ee-eEEEE
Confidence 35789999999999873 48999999998 5999999999999986 45 99999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCCC------CceEEECCCCCCCC---
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD------SGRIFFGDQGPATQ--- 147 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~~------~G~i~fGg~d~~~~--- 147 (386)
|+....+.......++||||||+..++ ++++|+++|+| +++||+||++.. .|.|+||++|++++
T Consensus 110 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~ 189 (341)
T 3k1w_A 110 EVTEMPALPFMLAEFDGVVGMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGN 189 (341)
T ss_dssp EEEECCHHHHTTCSSSEEEECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEE
T ss_pred EEEEccccccccCCcceEEECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCc
Confidence 999887642233357999999998765 78999999999 899999999864 79999999999864
Q ss_pred -eeeeeeecCCcceeEEEEEeEEEEcCeeec-CCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccc
Q 016600 148 -QSTSFLASNGKYITYIIGVETCCIGSSCLK-QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCC 225 (386)
Q Consensus 148 -~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~-~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C 225 (386)
.|+|+. ...+|.|.+++|.|+++.+. .....+||||||++++||++++++|.+++.... . ..+ +...|
T Consensus 190 l~~~p~~----~~~~w~v~l~~i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~~~----~-~~g-~~~~C 259 (341)
T 3k1w_A 190 FHYINLI----KTGVWQIQMKGVSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKK----R-LFD-YVVKC 259 (341)
T ss_dssp EEEEECS----STTSCEEEECCEEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----C-SSC-EEEEG
T ss_pred eEEEecC----CCCEEEEEEeEEEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCCee----c-CCC-eEEeC
Confidence 477764 24789999999999999643 456789999999999999999999998874321 1 111 33445
Q ss_pred cccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEcc-----CCCceEEcceeeeeEEEEEecCCCE
Q 016600 226 YKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVVFDRENLK 299 (386)
Q Consensus 226 ~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvvFD~e~~r 299 (386)
.. ...+|+|+|+| ++..++|++++|++......+..|+ +|+.. ..+.||||+.|||++|+|||++++|
T Consensus 260 ~~-----~~~~p~i~f~f-~g~~~~l~~~~~~~~~~~~~~~~C~~~i~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~ 333 (341)
T 3k1w_A 260 NE-----GPTLPDISFHL-GGKEYTLTSADYVFQESYSSKKLCTLAIHAMDIPPPTGPTWALGATFIRKFYTEFDRRNNR 333 (341)
T ss_dssp GG-----GGGCCCEEEEE-TTEEEEECHHHHBCCSCCCTTSEEEBSEEECCCCTTTCSCEEECHHHHTTEEEEEETTTTE
T ss_pred CC-----CCcCCcEEEEE-CCEEEEECHHHheeEccCCCCCeEEeEEEecccCCCCCCeEEEChHHhcceEEEEeCCCCE
Confidence 43 45789999999 6799999999999876543356787 57762 2468999999999999999999999
Q ss_pred EEEEcCC
Q 016600 300 LGWSHSN 306 (386)
Q Consensus 300 IGfa~~~ 306 (386)
||||+++
T Consensus 334 igfA~a~ 340 (341)
T 3k1w_A 334 IGFALAR 340 (341)
T ss_dssp EEEEEEC
T ss_pred EEEEECC
Confidence 9999975
No 27
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=9.1e-43 Score=343.47 Aligned_cols=255 Identities=20% Similarity=0.305 Sum_probs=207.1
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+.. .|.|.++|++| +++|.+++|+|+|++. ...+ .|
T Consensus 100 C~~~~~y~~~~SsT~~~~------------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~-~F 150 (375)
T 1miq_A 100 CSIKNLYDSSKSKSYEKD------------------GTKVDITYGSG--TVKGFFSKDLVTLGHL--------SMPY-KF 150 (375)
T ss_dssp GGGSCCBCGGGCTTCEEE------------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEE-EE
T ss_pred ccCCCcCCCccCCceEEC------------------CcEEEEEeCCC--eEEEEEEEEEEEEcCc--------eECc-EE
Confidence 345677777777777764 48999999998 4899999999999975 4567 99
Q ss_pred eeeee----ccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCCC--CceEEECCCCCCC---
Q 016600 83 GCGMK----QSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD--SGRIFFGDQGPAT--- 146 (386)
Q Consensus 83 g~~~~----~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~~--~G~i~fGg~d~~~--- 146 (386)
||+.. +. .+ ....+|||||||++.++ ++++|+++|+| +++||+||++.+ .|.|+|||+|+++
T Consensus 151 g~~~~~~~~~~-~f-~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g 228 (375)
T 1miq_A 151 IEVTDTDDLEP-IY-SSVEFDGILGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEG 228 (375)
T ss_dssp EEEEECGGGTT-HH-HHSCCCEEEECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEE
T ss_pred EEEEecccccc-cc-ccCCCceEEeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCC
Confidence 99998 54 32 22256999999998654 78999999999 899999999863 7999999999876
Q ss_pred -CeeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccc
Q 016600 147 -QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCC 225 (386)
Q Consensus 147 -~~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C 225 (386)
+.|+|+.. ..+|.|.++ |.|+++.+ ....+||||||++++||++++++|.++|.... ....+.+...|
T Consensus 229 ~l~~~p~~~----~~~w~v~l~-i~v~g~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~~~g~~~~~C 297 (375)
T 1miq_A 229 NITYEKLNH----DLYWQIDLD-VHFGKQTM--EKANVIVDSGTTTITAPSEFLNKFFANLNVIK----VPFLPFYVTTC 297 (375)
T ss_dssp EEEEEEBSS----SSSSEEEEE-EEETTEEE--EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE----CTTSSCEEEET
T ss_pred ceEEEecCC----CceEEEEEE-EEECCEEc--ccceEEecCCCccEEcCHHHHHHHHHHhCCcc----cCCCCeEEEEC
Confidence 35777742 469999999 99999988 56789999999999999999999998875421 11222344567
Q ss_pred cccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC--CCceEEcceeeeeEEEEEecCCCEEEE
Q 016600 226 YKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGW 302 (386)
Q Consensus 226 ~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~--~~~~IlG~~fl~~~yvvFD~e~~rIGf 302 (386)
+. ..+|+|+|+| +|..++|++++|++.........|+ +|+..+ .+.||||+.|||++|+|||++++||||
T Consensus 298 ~~------~~~P~i~f~f-~g~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILG~~fl~~~yvvfD~~~~riGf 370 (375)
T 1miq_A 298 DN------KEMPTLEFKS-ANNTYTLEPEYYMNPILEVDDTLCMITMLPVDIDSNTFILGDPFMRKYFTVFDYDKESVGF 370 (375)
T ss_dssp TC------TTCCCEEEEC-SSCEEEECGGGSEEESSSSSCSEEEESEEECCSSSSEEEECHHHHHHEEEEEETTTTEEEE
T ss_pred CC------CCCCcEEEEE-CCEEEEECHHHhEeeccCCCCCeEEEEEEECCCCCCcEEECHHHhccEEEEEECCCCEEEE
Confidence 64 4799999999 6899999999999886532245786 788765 368999999999999999999999999
Q ss_pred EcCC
Q 016600 303 SHSN 306 (386)
Q Consensus 303 a~~~ 306 (386)
|+++
T Consensus 371 A~~~ 374 (375)
T 1miq_A 371 AIAK 374 (375)
T ss_dssp EEEC
T ss_pred EEcC
Confidence 9874
No 28
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=7e-43 Score=353.92 Aligned_cols=270 Identities=23% Similarity=0.349 Sum_probs=210.7
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
+..++.|+|++|+||+. .+|+|.+.|++| +++|.+++|+|+|++. .+.++.|
T Consensus 91 C~~~~~y~~~~SsT~~~------------------~~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~F 142 (478)
T 1qdm_A 91 CYLHSRYKAGASSTYKK------------------NGKPAAIQYGTG--SIAGYFSEDSVTVGDL--------VVKDQEF 142 (478)
T ss_dssp GGGSCCBCGGGCTTCBC------------------CCCEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEE
T ss_pred ccCCCCCCcccCCCeee------------------CCcEEEEEcCCC--CeEEEEEEEEEEECCe--------EECCEEE
Confidence 34567888888888877 348999999998 5899999999999975 5678999
Q ss_pred eeeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC----CCceEEECCCCCCCC----
Q 016600 83 GCGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPATQ---- 147 (386)
Q Consensus 83 g~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~----~~G~i~fGg~d~~~~---- 147 (386)
||+..+.+..+....+|||||||++.++ ++++|+++|+| +++||+||++. ..|.|+|||+|++++
T Consensus 143 g~a~~~~~~~f~~~~~dGIlGLg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l 222 (478)
T 1qdm_A 143 IEATKEPGITFLVAKFDGILGLGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEH 222 (478)
T ss_dssp EEEEECCBSHHHHCSSSEEEECSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEE
T ss_pred EEEEecCCcccccccccceecccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCc
Confidence 9999876542222356999999998776 56789999999 89999999875 379999999999874
Q ss_pred eeeeeeecCCcceeEEEEEeEEEEcCeeec--CCCceEEEeccccceeeCHHHHHHHHHHHHHhc---------------
Q 016600 148 QSTSFLASNGKYITYIIGVETCCIGSSCLK--QTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQV--------------- 210 (386)
Q Consensus 148 ~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~--~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~--------------- 210 (386)
.|+|+.. ..+|.|.+++|.|+++.+. .....+||||||+++++|+++|++|.++|....
T Consensus 223 ~~~pv~~----~~~w~v~l~~i~v~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a~~~~s~~Ck~~v~~yg~ 298 (478)
T 1qdm_A 223 TYVPVTQ----KGYWQFDMGDVLVGGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGAAGVVSQECKTIVSQYGQ 298 (478)
T ss_dssp EEEEEEE----ETTEEEEECCEEETTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTCCCBCCHHHHHHHHHTHH
T ss_pred eEEeccC----CCeEEEEEeEEEECCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCccccccccccchhhhhhh
Confidence 5788753 4699999999999998865 246789999999999999999999998874321
Q ss_pred -------ccc-c--------------c-----------c-------------------------------------cccc
Q 016600 211 -------NDT-I--------------T-----------S-------------------------------------FEGY 220 (386)
Q Consensus 211 -------~~~-~--------------~-----------~-------------------------------------~~~~ 220 (386)
... . . . ....
T Consensus 299 ~ii~~l~~~~~p~~vC~~iglC~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~C~~Ce~~v~~~~~~l~~n~t~~~I~~~ 378 (478)
T 1qdm_A 299 QILDLLLAETQPKKICSQVGLCTFDGTRGVSAGIRSVVDDEPVKSNGLRADPMCSACEMAVVWMQNQLAQNKTQDLILDY 378 (478)
T ss_dssp HHHHHHHTTCCHHHHHHHTTCC---------------------------CHHHHHHHHHHHHHHHHHHHTTCCHHHHHHH
T ss_pred HHHHhhhhccChhhhhccccccccCccccccccccccccccccccccccccccchHHHHHHHHHHHHHhccccHHHHHHH
Confidence 000 0 0 0 0000
Q ss_pred cccccccc---------ccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEE-EEccC-----CCceEEccee
Q 016600 221 PWKCCYKS---------SSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVD-----GDIGTIGQNF 285 (386)
Q Consensus 221 ~~~~C~~~---------~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~~-----~~~~IlG~~f 285 (386)
..+.|+.. +|..+..+|+|+|+| +|+.|+|++++|++....+....|++ |+..+ ++.||||+.|
T Consensus 379 ~~~~C~~~~~~~g~~~v~C~~~~~lP~i~f~~-gg~~~~l~p~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~~ILGd~f 457 (478)
T 1qdm_A 379 VNQLCNRLPSPMGESAVDCGSLGSMPDIEFTI-GGKKFALKPEEYILKVGEGAAAQCISGFTAMDIPPPRGPLWILGDVF 457 (478)
T ss_dssp HHHHTTCBCCSSSCCEECGGGGTTCCCEEEEE-TTEEEEECHHHHEEECSCGGGCCEEESEEECCCCTTSCSEEEECHHH
T ss_pred HHHHhhccCCCCCeEEeecccccccccEEEEE-CCEEEEEChHHhEEEccCCCCCeEEEEEEeccCCCCCCCcEEECHHH
Confidence 12345433 344456899999999 68999999999999876543567875 65432 4689999999
Q ss_pred eeeEEEEEecCCCEEEEEcC
Q 016600 286 MTGYRVVFDRENLKLGWSHS 305 (386)
Q Consensus 286 l~~~yvvFD~e~~rIGfa~~ 305 (386)
|+++|+|||++|+|||||++
T Consensus 458 l~~~y~vfD~~~~rIGfA~a 477 (478)
T 1qdm_A 458 MGPYHTVFDYGKLRIGFAKA 477 (478)
T ss_dssp HTTEEEEEETTTTEEEEEEE
T ss_pred hccEEEEEECCCCEEEEEeC
Confidence 99999999999999999985
No 29
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=1.7e-42 Score=334.93 Aligned_cols=256 Identities=19% Similarity=0.262 Sum_probs=203.0
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+ ++. +.|.|.++|++| +.++|.+++|+|+|++. ...++.||
T Consensus 52 ~~~~~y~~~~Ss-~~~------------------~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg 103 (323)
T 1izd_A 52 SGHDYYTPGSSA-QKI------------------DGATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVE 103 (323)
T ss_dssp TTCCCBCCCTTC-EEE------------------EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred cCCCCCCccccC-Ccc------------------CCCeEEEEcCCC-CeEEEEEEEEEEEECCE--------EECceEEE
Confidence 346677777766 432 358999999998 66999999999999975 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC---------hHHHHHhcCCCCCeEEEeecCCCCceEEECCCCCCCC----eee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS---------VPSLLAKAGLIRNSFSMCFDKDDSGRIFFGDQGPATQ----QST 150 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S---------~~~~L~~~glI~~~FSl~l~~~~~G~i~fGg~d~~~~----~~~ 150 (386)
|++.+++.+.....+|||||||+..++ ++++|+++ +.+++||+||++...|.|+||++|++++ .|+
T Consensus 104 ~~~~~~~~~~~~~~~~GilGLg~~~~s~~~p~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~ 182 (323)
T 1izd_A 104 SAEKVSSEFTQDTANDGLLGLAFSSINTVQPTPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYT 182 (323)
T ss_dssp EEEEECHHHHHCTTCCEEEECSCGGGCCCBSSCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEE
T ss_pred EEEeccccccccCCCceEEecCcccccccCCCCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEE
Confidence 999887654433356999999997544 57899886 3389999999987789999999999874 477
Q ss_pred eeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccccccccccccccc
Q 016600 151 SFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSS 230 (386)
Q Consensus 151 p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~ 230 (386)
|++. ...+|.|.+++|.|++ .+......+||||||++++||++++++|.++|.. .........+...|+
T Consensus 183 p~~~---~~~~w~v~l~~i~v~~-~~~~~~~~aiiDSGTs~~~lp~~~~~~i~~~i~g---a~~~~~~g~~~~~C~---- 251 (323)
T 1izd_A 183 DVDN---SQGFWGFTADGYSIGS-DSSSDSITGIADTGTTLLLLDDSIVDAYYEQVNG---ASYDSSQGGYVFPSS---- 251 (323)
T ss_dssp ECBC---TTSSCEEEESEEEETT-EEECCCEEEEECTTCCSEEECHHHHHHHHTTSTT---CEEETTTTEEEEETT----
T ss_pred ECCC---CCceEEEEECeEEECC-cccCCCceEEEeCCCcceeCCHHHHHHHHHhCCC---cEEcCcCCEEEEECC----
Confidence 7753 2468999999999999 6665678999999999999999999998776521 111111222334565
Q ss_pred CCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEEE-EEccC-CCceEEcceeeeeEEEEEecCCCEEEEEcC
Q 016600 231 QRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 305 (386)
Q Consensus 231 ~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~ 305 (386)
..+|+|+|+| ++..++|++++|++.... +..|++ |+..+ .+.||||+.|||++|+|||++++|||||++
T Consensus 252 ---~~~P~i~f~f-gg~~~~i~~~~~~~~~~~--~~~C~~~i~~~~~~~~~IlG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1izd_A 252 ---ASLPDFSVTI-GDYTATVPGEYISFADVG--NGQTFGGIQSNSGIGFSIFGDVFLKSQYVVFDASGPRLGFAAQ 322 (323)
T ss_dssp ---CCCCCEEEEE-TTEEEEECHHHHEEEECS--TTEEEESEEECTTTSSEEECHHHHTTEEEEEETTTTEEEEEEE
T ss_pred ---CCCceEEEEE-CCEEEecCHHHeEEecCC--CCeEEEEEEcCCCCCcEEEChHHhcCEEEEEECCCCEEEEeeC
Confidence 3689999999 789999999999887532 567976 77654 468999999999999999999999999985
No 30
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=2e-41 Score=329.69 Aligned_cols=247 Identities=19% Similarity=0.288 Sum_probs=196.6
Q ss_pred CCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEeeeeeccCCCCCCCCCceEEecCCCCC---------
Q 016600 39 PCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEI--------- 109 (386)
Q Consensus 39 ~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~~g~~~~~~~~dGIlGLg~~~~--------- 109 (386)
.|.|.++|++| +++|.+++|+|+|++. .+.++.|||++.+.+ + . .+|||||||+..+
T Consensus 56 ~~~~~i~Yg~G--s~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~-~--~~~GilGLg~~~~s~~~~~~~~ 121 (340)
T 1wkr_A 56 SDKVSVTYGSG--SFSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F-D--GVDGILGVGPVDLTVGTLSPHT 121 (340)
T ss_dssp EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C-T--TCSEEEECSCGGGGTTSEESCT
T ss_pred CceEEEEECCc--EEEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C-c--CCCcEEECCccccccccccccc
Confidence 38999999998 4899999999999885 568999999999765 3 2 4699999998754
Q ss_pred -----ChHHHHHhcCCC-CCeEEEeecCC-----CCceEEECCCCCCC----CeeeeeeecCCcceeEEEEEeEEEEcC-
Q 016600 110 -----SVPSLLAKAGLI-RNSFSMCFDKD-----DSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGS- 173 (386)
Q Consensus 110 -----S~~~~L~~~glI-~~~FSl~l~~~-----~~G~i~fGg~d~~~----~~~~p~v~~~~~~~~y~V~l~~i~v~~- 173 (386)
+++++|+++|+| +++||+||.+. ..|.|+||++|+++ +.|+|++.......+|.|. ++|.|++
T Consensus 122 ~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w~v~-~~i~v~~~ 200 (340)
T 1wkr_A 122 STSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYWGIN-QSIRYGSS 200 (340)
T ss_dssp TCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSSEEE-EEEEETTT
T ss_pred cccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceEEEE-eeEEECCC
Confidence 358899999999 89999999863 36999999999864 5688887644335799999 9999998
Q ss_pred eeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccccccccCCCCCCCeEEEEEcCCceeeecC
Q 016600 174 SCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNN 253 (386)
Q Consensus 174 ~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g~~~~~i~~ 253 (386)
+.+. ....+||||||++++||++++++|.+++.+.. ......+...|.. ...+|+|+|+| ++..+.+++
T Consensus 201 ~~l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~~----~~~~g~~~~~C~~-----~~~~p~i~f~f-~g~~~~i~~ 269 (340)
T 1wkr_A 201 TSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAVA----DNNTGLLRLTTAQ-----YANLQSLFFTI-GGQTFELTA 269 (340)
T ss_dssp EEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCEE----CTTTSSEEECHHH-----HHTCCCEEEEE-TTEEEEECT
T ss_pred eEcc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCEE----cCCCCeEEeeccc-----cccCCcEEEEE-CCEEEEEcH
Confidence 7775 34689999999999999999999987764322 1111223345543 34789999999 678999999
Q ss_pred CeEEEEeec-----c-eeeEEEEEEccC-----CCceEEcceeeeeEEEEEecCCCEEEEEcCCCCCCC
Q 016600 254 PVFVIYGTQ-----V-VTGFCLAIQPVD-----GDIGTIGQNFMTGYRVVFDRENLKLGWSHSNCQDLN 311 (386)
Q Consensus 254 ~~y~~~~~~-----~-~~~~Cl~i~~~~-----~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~~C~~~~ 311 (386)
++|+++... + ...||+++...+ +..||||+.|||++|+|||++++|||||+++|++.+
T Consensus 270 ~~yi~~~~~~~~~g~~~~~c~~~~~~~~~~~~~~~~~iLG~~fl~~~y~vfD~~~~~igfA~~~~~~~~ 338 (340)
T 1wkr_A 270 NAQIWPRNLNTAIGGSASSVYLIVGDLGSDSGEGLDFINGLTFLERFYSVYDTTNKRLGLATTSFTTAT 338 (340)
T ss_dssp GGGBCCGGGGGGGTCCSSCEEBCEEECSSCTTSSCCEEECHHHHTSEEEEEETTTTEEEEEECTTTTCC
T ss_pred HHhccccccccccCCCCceEEEEEecCCCCCCCCcceEeChHhhhheEEEEeCCCCeEEEEecCCCCCC
Confidence 999876542 1 134556776521 246999999999999999999999999999998754
No 31
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=3.5e-42 Score=345.91 Aligned_cols=256 Identities=19% Similarity=0.266 Sum_probs=206.5
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+.. +|.|.++|++| +++|.+++|+|+|++. ... +.|
T Consensus 176 C~~~~~ydps~SsT~~~~------------------~~~~~i~YgdG--s~~G~~~~Dtv~ig~~--------~v~-~~F 226 (453)
T 2bju_A 176 CLTKHLYDSSKSRTYEKD------------------GTKVEMNYVSG--TVSGFFSKDLVTVGNL--------SLP-YKF 226 (453)
T ss_dssp GGGSCCBCGGGCTTCEEE------------------EEEEEEECSSS--EEEEEEEEEEEEETTE--------EEE-EEE
T ss_pred cCCCCcCCCccCCceeEC------------------CcEEEEEcCCC--CeEEEEEEEEEEEeCc--------EEE-EEE
Confidence 445677888888888774 48999999998 4899999999999975 456 999
Q ss_pred eeeeecc--CCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCC--CCceEEECCCCCCC----C
Q 016600 83 GCGMKQS--GGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKD--DSGRIFFGDQGPAT----Q 147 (386)
Q Consensus 83 g~~~~~~--g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~--~~G~i~fGg~d~~~----~ 147 (386)
||+..+. +..+....+|||||||++.++ ++++|+++|+| +++||+||++. ..|.|+|||+|+++ +
T Consensus 227 g~a~~~~~~g~~f~~~~~dGIlGLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l 306 (453)
T 2bju_A 227 IEVIDTNGFEPTYTASTFDGILGLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPL 306 (453)
T ss_dssp EEEEECGGGTTHHHHSSCCEEEECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEE
T ss_pred EEEEEecccCccccccCCceeEeccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCce
Confidence 9999886 543322356999999998654 67999999999 89999999985 47999999999876 4
Q ss_pred eeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccc-ccccccc
Q 016600 148 QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEG-YPWKCCY 226 (386)
Q Consensus 148 ~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~-~~~~~C~ 226 (386)
.|+|+.. ..+|.|.++ |.|+++. . ....+||||||+++++|++++++|.+++.. .. ...+ .+...|+
T Consensus 307 ~~~pv~~----~~~w~V~l~-I~Vgg~~-~-~~~~aIiDSGTsl~~lP~~~~~~l~~~i~~----~~-~~~g~~~~v~C~ 374 (453)
T 2bju_A 307 TYEKLNH----DLYWQITLD-AHVGNIM-L-EKANCIVDSGTSAITVPTDFLNKMLQNLDV----IK-VPFLPFYVTLCN 374 (453)
T ss_dssp EEEEEEE----ETTEEEEEE-EEETTEE-E-EEEEEEECTTCCSEEECHHHHHHHTTTSSC----EE-CTTSSCEEEETT
T ss_pred EEEecCC----CceEEEEEE-EEECcEE-e-ccccEEEcCCCCeEecCHHHHHHHHHHhCC----cc-cCCCceEEEecC
Confidence 5888864 368999999 9999943 3 566899999999999999999998776533 11 1111 2345565
Q ss_pred ccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC--CCceEEcceeeeeEEEEEecCCCEEEEE
Q 016600 227 KSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGWS 303 (386)
Q Consensus 227 ~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~--~~~~IlG~~fl~~~yvvFD~e~~rIGfa 303 (386)
. ..+|+|+|+| +|..++|++++|++.........|+ +|+..+ .+.||||+.|||++|+|||++++|||||
T Consensus 375 ~------~~~P~itf~f-gg~~~~l~~~~yi~~~~~~g~~~C~~~~~~~~~~~~~~ILGd~Flr~~yvVFD~~n~rIGfA 447 (453)
T 2bju_A 375 N------SKLPTFEFTS-ENGKYTLEPEYYLQHIEDVGPGLCMLNIIGLDFPVPTFILGDPFMRKYFTVFDYDNHSVGIA 447 (453)
T ss_dssp C------TTCCCEEEEC-SSCEEEECHHHHEEECTTTSTTEEEECEEECCCSSCEEEECHHHHHHEEEEEETTTTEEEEE
T ss_pred C------CCCCcEEEEE-CCEEEEECHHHhEeecccCCCceEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEEE
Confidence 4 5799999999 7899999999999986532245786 687765 3589999999999999999999999999
Q ss_pred cCC
Q 016600 304 HSN 306 (386)
Q Consensus 304 ~~~ 306 (386)
+++
T Consensus 448 ~~~ 450 (453)
T 2bju_A 448 LAK 450 (453)
T ss_dssp EEC
T ss_pred Ecc
Confidence 974
No 32
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.7e-42 Score=332.61 Aligned_cols=240 Identities=19% Similarity=0.270 Sum_probs=192.8
Q ss_pred CCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEeeeeeccCCCCCCCCCceEEecCCCCCC-------
Q 016600 38 QPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------- 110 (386)
Q Consensus 38 ~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg~~~~~~g~~~~~~~~dGIlGLg~~~~S------- 110 (386)
+.|.|.++|++| +.++|.+++|+|+|++. .+.++.|||++.+++.+.....+|||||||+..++
T Consensus 67 ~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~~~~~~ 137 (323)
T 1bxo_A 67 SGYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTVQPQSQ 137 (323)
T ss_dssp EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCCBSSCC
T ss_pred CCCeEEEEeCCC-CeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccccCCCCceEEEeCcccccccccCCC
Confidence 358999999998 66999999999999975 56889999999887655443457999999987543
Q ss_pred --hHHHHHhcCCC-CCeEEEeecCCCCceEEECCCCCCC----CeeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceE
Q 016600 111 --VPSLLAKAGLI-RNSFSMCFDKDDSGRIFFGDQGPAT----QQSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKA 183 (386)
Q Consensus 111 --~~~~L~~~glI-~~~FSl~l~~~~~G~i~fGg~d~~~----~~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~ 183 (386)
++++|+++ | +++||+||++...|.|+||++|+++ +.|+|++.. ..+|.|.+++|.|++ +......+
T Consensus 138 ~~~~~~l~~~--i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~---~~~w~v~l~~i~v~~--~~~~~~~a 210 (323)
T 1bxo_A 138 TTFFDTVKSS--LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNS---QGFWSFNVDSYTAGS--QSGDGFSG 210 (323)
T ss_dssp CCHHHHHGGG--BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCT---TSSCEEEEEEEEETT--EEEEEEEE
T ss_pred CCHHHHHHHh--cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCC---CCeEEEEEeeEEECC--ccCCCceE
Confidence 67899876 6 8999999998778999999999865 568888532 468999999999999 33356789
Q ss_pred EEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccccccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecc
Q 016600 184 IVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQV 263 (386)
Q Consensus 184 iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~ 263 (386)
||||||++++||++++++|.++|.. .........+...|+ ..+|+|+|+| +|..++|++++|++....
T Consensus 211 iiDSGTs~~~lP~~~~~~l~~~i~~---a~~~~~~g~~~~~C~-------~~~P~i~f~f-gg~~~~l~~~~~~~~~~~- 278 (323)
T 1bxo_A 211 IADTGTTLLLLDDSVVSQYYSQVSG---AQQDSNAGGYVFDCS-------TNLPDFSVSI-SGYTATVPGSLINYGPSG- 278 (323)
T ss_dssp EECTTCSSEEECHHHHHHHHTTSTT---CEEETTTTEEEECTT-------CCCCCEEEEE-TTEEEEECHHHHEEEECS-
T ss_pred EEeCCCCceeCCHHHHHHHHHhCCC---ceEcCcCCEEEEECC-------CCCceEEEEE-CCEEEEECHHHeEEeccC-
Confidence 9999999999999999998776522 111111222334565 3689999999 789999999999886543
Q ss_pred eeeEEEE-EEccC-CCceEEcceeeeeEEEEEecCCCEEEEEcC
Q 016600 264 VTGFCLA-IQPVD-GDIGTIGQNFMTGYRVVFDRENLKLGWSHS 305 (386)
Q Consensus 264 ~~~~Cl~-i~~~~-~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~ 305 (386)
....|++ |+..+ .+.||||+.|||++|+|||++|+|||||++
T Consensus 279 ~~~~C~~~i~~~~~~~~~ILG~~fl~~~y~vfD~~~~riGfA~~ 322 (323)
T 1bxo_A 279 DGSTCLGGIQSNSGIGFSIFGDIFLKSQYVVFDSDGPQLGFAPQ 322 (323)
T ss_dssp SSSCEEESEEECTTCSSEEECHHHHTTEEEEEETTTTEEEEEEB
T ss_pred CCCeEEEEEECCCCCCcEEEChHHHcCEEEEEECCCCEEEEecC
Confidence 2367876 76654 468999999999999999999999999986
No 33
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=2.2e-41 Score=340.35 Aligned_cols=255 Identities=18% Similarity=0.301 Sum_probs=206.1
Q ss_pred CCCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEE
Q 016600 3 DRDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVII 82 (386)
Q Consensus 3 ~~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~f 82 (386)
++.++.|+|++|+||+.. +|.|.+.|++| +++|.+++|+|+|++. ... +.|
T Consensus 175 C~~~~~ydps~SsT~~~~------------------~~~f~i~YgdG--s~~G~~~~Dtv~igg~--------~v~-~~F 225 (451)
T 3qvc_A 175 CESKNHYDSSKSKTYEKD------------------DTPVKLTSKAG--TISGIFSKDLVTIGKL--------SVP-YKF 225 (451)
T ss_dssp GTTSCCBCGGGCTTCEEE------------------EEEEEEECSSE--EEEEEEEEEEEEETTE--------EEE-EEE
T ss_pred cCCCCCCCCCCCcccccC------------------CCEEEEEECCC--EEEEEEEEEEEEECCE--------EEE-EEE
Confidence 456788888888888873 48999999998 4999999999999985 456 999
Q ss_pred eeeee----ccCCCCCCCCCceEEecCCCCC------ChHHHHHhcCCC-CCeEEEeecCCC--CceEEECCCCCCCC--
Q 016600 83 GCGMK----QSGGYLDGVAPDGLIGLGLGEI------SVPSLLAKAGLI-RNSFSMCFDKDD--SGRIFFGDQGPATQ-- 147 (386)
Q Consensus 83 g~~~~----~~g~~~~~~~~dGIlGLg~~~~------S~~~~L~~~glI-~~~FSl~l~~~~--~G~i~fGg~d~~~~-- 147 (386)
||+.. +++ + ....+|||||||++.+ +++++|+++|+| +++||+||++.+ .|.|+|||+|++++
T Consensus 226 g~a~~t~~~~~~-f-~~~~~dGILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G 303 (451)
T 3qvc_A 226 IEMTEIVGFEPF-Y-SESDVDGVFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDG 303 (451)
T ss_dssp EEEEEEEECTTH-H-HHSCCCEEEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEE
T ss_pred EEEEeccccCCC-c-cCCCCCEEEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCC
Confidence 99998 655 3 2225699999999865 478999999999 899999999864 69999999999864
Q ss_pred --eeeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHHHHHHHHHHHHHhcccccccccccccccc
Q 016600 148 --QSTSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFEGYPWKCC 225 (386)
Q Consensus 148 --~~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~C 225 (386)
.|+|+. ...+|.|.++ |.|+++ ......+||||||+++++|++++++|.+++.. ......+.
T Consensus 304 ~l~~~pv~----~~~~w~v~l~-I~Vgg~--~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i~a----~~~~~~g~----- 367 (451)
T 3qvc_A 304 PLNYEKLN----HDLMWQVDLD-VHFGNV--SSKKANVILDSATSVITVPTEFFNQFVESASV----FKVPFLSL----- 367 (451)
T ss_dssp EEEEEECS----STTSSEEEEE-EEETTE--EEEEEEEEECTTBSSEEECHHHHHHHHTTTTC----EECTTSSC-----
T ss_pred ceEEEEcc----cCCeeEEEEE-EEECCc--cCCCceEEEeCCCccccCCHHHHHHHHHHcCC----eecCCCCe-----
Confidence 477775 2479999999 999998 33466899999999999999999998876632 22211222
Q ss_pred cccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEccC--CCceEEcceeeeeEEEEEecCCCEEEE
Q 016600 226 YKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPVD--GDIGTIGQNFMTGYRVVFDRENLKLGW 302 (386)
Q Consensus 226 ~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~~--~~~~IlG~~fl~~~yvvFD~e~~rIGf 302 (386)
|..+|. ...+|+|+|+| +|..++|++++|++.........|+ ++++.+ .+.||||++|||++|+|||++++||||
T Consensus 368 y~v~C~-~~~~P~itf~f-gg~~i~lp~~~yi~~~~~~~~~~C~~~i~~~~~~~~~~ILG~~FLr~~YvVfD~~n~rIGf 445 (451)
T 3qvc_A 368 YVTTCG-NTKLPTLEYRS-PNKVYTLEPKQYLEPLENIFSALCMLNIVPIDLEKNTFVLGDPFMRKYFTVYDYDNHTVGF 445 (451)
T ss_dssp EEEETT-CTTCCCEEEEE-TTEEEEECHHHHEEECTTTSTTEEEECEEECCCSTTEEEECHHHHHHEEEEEETTTTEEEE
T ss_pred EEeeCC-cCcCCcEEEEE-CCEEEEEcHHHheeecccCCCCeEEEEEEeCCCCCCCEEECHHHhhcEEEEEECCCCEEEE
Confidence 333444 46899999999 6899999999999986532245665 677765 578999999999999999999999999
Q ss_pred EcCC
Q 016600 303 SHSN 306 (386)
Q Consensus 303 a~~~ 306 (386)
|+++
T Consensus 446 A~ak 449 (451)
T 3qvc_A 446 ALAK 449 (451)
T ss_dssp EEEC
T ss_pred EEcc
Confidence 9974
No 34
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=100.00 E-value=1.6e-37 Score=287.88 Aligned_cols=217 Identities=21% Similarity=0.351 Sum_probs=175.7
Q ss_pred cccccEEEeeeeeccCCCCCCCCCceEEecCCCCCC------hHHHHHhcCCC-CCeEEEeecCCC----CceEEECCCC
Q 016600 75 SVQASVIIGCGMKQSGGYLDGVAPDGLIGLGLGEIS------VPSLLAKAGLI-RNSFSMCFDKDD----SGRIFFGDQG 143 (386)
Q Consensus 75 ~~~~~~~fg~~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~L~~~glI-~~~FSl~l~~~~----~G~i~fGg~d 143 (386)
..+.++.|||++.+++.++....+|||||||++.++ ++++|+++|+| +++||+||++.. .|+|+||++|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 456899999999987755554567999999998654 67899999999 899999999753 7999999999
Q ss_pred CCCC----eeeeeeecCCcceeEEEEEeEEEEcCeee-cCCCceEEEeccccceeeCHHHHHHHHHHHHHhccccccccc
Q 016600 144 PATQ----QSTSFLASNGKYITYIIGVETCCIGSSCL-KQTSFKAIVDSGSSFTFLPKEVYETIAAEFDRQVNDTITSFE 218 (386)
Q Consensus 144 ~~~~----~~~p~v~~~~~~~~y~V~l~~i~v~~~~~-~~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~ 218 (386)
++++ .|+|+.. ..+|.|.+++|.|+++.+ ......+||||||+++++|++++++|.+++.... . ..
T Consensus 83 ~~~~~g~l~~~p~~~----~~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~----~-~~ 153 (241)
T 1lya_B 83 SKYYKGSLSYLNVTR----KAYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVP----L-IQ 153 (241)
T ss_dssp GGGEEEEEEEEECSS----BTTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTCEE----E-ET
T ss_pred HHHcCCceEEEECcc----ccEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCCee----c-cC
Confidence 9764 4777642 478999999999999874 3456789999999999999999999998874321 1 12
Q ss_pred ccccccccccccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEcc-----CCCceEEcceeeeeEEEE
Q 016600 219 GYPWKCCYKSSSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV-----DGDIGTIGQNFMTGYRVV 292 (386)
Q Consensus 219 ~~~~~~C~~~~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~-----~~~~~IlG~~fl~~~yvv 292 (386)
..+...|+.. ..+|+|+|+| ++..++|++++|++.........|+ +|+.. ..+.||||++|||++|+|
T Consensus 154 g~~~~~C~~~-----~~~p~i~f~f-~g~~~~l~~~~y~~~~~~~~~~~C~~~~~~~~~~~~~~~~~ilG~~fl~~~y~v 227 (241)
T 1lya_B 154 GEYMIPCEKV-----STLPAITLKL-GGKGYKLSPEDYTLKVSQAGKTLCLSGFMGMDIPPPSGPLWILGDVFIGRYYTV 227 (241)
T ss_dssp TEEEEEGGGG-----GGSCCEEEEE-TTEEEEECTTTSEEEETTTTSSEEEESEEECCCCTTTCCCEEECHHHHTTEEEE
T ss_pred CcEEEECCCC-----ccCCeEEEEE-CCEEEEECHHHhEEEccCCCCCeeEEEEEecccCCCCCCeEEechHHhcceEEE
Confidence 2334456643 4789999999 7899999999999887533346787 58764 246899999999999999
Q ss_pred EecCCCEEEEEcCC
Q 016600 293 FDRENLKLGWSHSN 306 (386)
Q Consensus 293 FD~e~~rIGfa~~~ 306 (386)
||++++|||||+++
T Consensus 228 fD~~~~~igfA~~~ 241 (241)
T 1lya_B 228 FDRDNNRVGFAEAA 241 (241)
T ss_dssp EETTTTEEEEEEEC
T ss_pred EECCCCEEEEEEcC
Confidence 99999999999864
No 35
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.96 E-value=8.4e-29 Score=229.09 Aligned_cols=172 Identities=22% Similarity=0.282 Sum_probs=143.9
Q ss_pred CCCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecCCCCcccccccccEEEe
Q 016600 4 RDLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISGGDNALKNSVQASVIIG 83 (386)
Q Consensus 4 ~~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~~~~~~~~~~~~~~~fg 83 (386)
+.++.|+|++|+||+... |.|.+.|++| +++|.+++|+|+|++. ...++.||
T Consensus 53 ~~~~~y~~~~SsT~~~~~------------------~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg 104 (239)
T 1b5f_A 53 RAHSMYESSDSSTYKENG------------------TFGAIIYGTG--SITGFFSQDSVTIGDL--------VVKEQDFI 104 (239)
T ss_dssp HTSCCBCGGGCTTCEEEE------------------EEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEE
T ss_pred CCCCCCCCccCCCeeeCC------------------cEEEEEECCC--cEEEEEEEEEEEECCc--------EEccEEEE
Confidence 346789999999998743 7899999998 5899999999999875 56789999
Q ss_pred eeeeccCCCCCCCCCceEEecCCCCCC--hHHHHHhcCCC-CCeEEEeecCC----CCceEEECCCCCCC----Ceeeee
Q 016600 84 CGMKQSGGYLDGVAPDGLIGLGLGEIS--VPSLLAKAGLI-RNSFSMCFDKD----DSGRIFFGDQGPAT----QQSTSF 152 (386)
Q Consensus 84 ~~~~~~g~~~~~~~~dGIlGLg~~~~S--~~~~L~~~glI-~~~FSl~l~~~----~~G~i~fGg~d~~~----~~~~p~ 152 (386)
|+..+.+..+....+|||||||+..++ ++++|+++|+| +++||+||++. ..|+|+||++|+++ +.|+|+
T Consensus 105 ~~~~~~~~~f~~~~~~GilGLg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~ 184 (239)
T 1b5f_A 105 EATDEADNVFLHRLFDGILGLSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPV 184 (239)
T ss_dssp EEEEECHHHHTTCSCCEEEECSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEE
T ss_pred EEEeccCccccccCcceEEecCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEc
Confidence 999876432222356999999999887 56789999999 89999999874 47999999999876 358887
Q ss_pred eecCCcceeEEEEEeEEEEcCeeec--CCCceEEEeccccceeeCHHHHHHHHHHHH
Q 016600 153 LASNGKYITYIIGVETCCIGSSCLK--QTSFKAIVDSGSSFTFLPKEVYETIAAEFD 207 (386)
Q Consensus 153 v~~~~~~~~y~V~l~~i~v~~~~~~--~~~~~~iiDSGTt~~~lP~~~~~~l~~~i~ 207 (386)
.. ..+|.|.|++|.|+++.+. .....+||||||++++||++++++|.++|.
T Consensus 185 ~~----~~~~~v~l~~i~v~~~~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 185 TY----QYYWQFGIGDVLIGDKSTGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp EE----ETTEEEEECCEEETTEECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred cc----CCeEEEEeeEEEECCEEecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 64 3699999999999999875 345789999999999999999999888763
No 36
>1b5f_B Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=99.64 E-value=8e-17 Score=125.06 Aligned_cols=77 Identities=21% Similarity=0.435 Sum_probs=62.6
Q ss_pred ccCCCCCCCeEEEEEcCCceeeecCCeEEEEeecceeeEEE-EEEcc----CCCceEEcceeeeeEEEEEecCCCEEEEE
Q 016600 229 SSQRLPKLPSVKLMFPQNNSFVVNNPVFVIYGTQVVTGFCL-AIQPV----DGDIGTIGQNFMTGYRVVFDRENLKLGWS 303 (386)
Q Consensus 229 ~~~~~~~~P~i~~~f~g~~~~~i~~~~y~~~~~~~~~~~Cl-~i~~~----~~~~~IlG~~fl~~~yvvFD~e~~rIGfa 303 (386)
+|.....+|+|+|+| +|+.+++++++|++....+....|+ +++.. .++.||||+.|||++|+|||++|+|||||
T Consensus 6 ~C~~~~~~P~i~f~~-gg~~~~l~~~~yi~~~~~~~~~~C~~~~~~~~~~~~~~~~ILGd~Fl~~~y~vfD~~~~riGfA 84 (87)
T 1b5f_B 6 DCNTLSSMPNVSFTI-GGKKFGLTPEQYILKVGKGEATQCISGFTAMDATLLGPLWILGDVFMRPYHTVFDYGNLLVGFA 84 (87)
T ss_dssp CGGGGGGCCCEEEEE-TTEEEEECHHHHEEEESCTTTCEEEESEEECCCBSSSBEEEECHHHHTTEEEEEETTTTEEEEE
T ss_pred ECCCCCcCCcEEEEE-CCEEEEECHHHhEEEccCCCCCEEEEEEEECCCCCCCCeEEechHHhccEEEEEECCCCEEEEE
Confidence 333335789999999 7899999999999886543346787 57763 34689999999999999999999999999
Q ss_pred cCC
Q 016600 304 HSN 306 (386)
Q Consensus 304 ~~~ 306 (386)
+++
T Consensus 85 ~~~ 87 (87)
T 1b5f_B 85 EAA 87 (87)
T ss_dssp EEC
T ss_pred EcC
Confidence 863
No 37
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=98.15 E-value=1.1e-06 Score=69.04 Aligned_cols=43 Identities=23% Similarity=0.290 Sum_probs=38.2
Q ss_pred CCCCCCCCCCCCCccccCCCcCCCCCCCCCCCCCCCceeeecCCCCceEeEEEEEEEEEeecC
Q 016600 5 DLNEYSPSASSTSKHLSCSHRLCDLGTSCQNPKQPCPYTMDYYTENTSSSGLLVEDILHLISG 67 (386)
Q Consensus 5 ~~~~f~p~~SsT~~~~~C~~~~C~~~~~C~~~~~~c~~~i~Y~~g~s~~~G~~~~D~v~l~~~ 67 (386)
.++.|+|++|+||+... |.|.+.|++| +++|.+++|+|+|++.
T Consensus 55 ~~~~y~p~~SsT~~~~~------------------~~~~i~Yg~G--s~~G~~~~Dtv~i~g~ 97 (97)
T 1lya_A 55 IHHKYNSDKSSTYVKNG------------------TSFDIHYGSG--SLSGYLSQDTVSVPCQ 97 (97)
T ss_dssp TSCCBCGGGCTTCEEEE------------------EEEEEECSSC--EEEEEEEEEEEEESCC
T ss_pred CCCCCCchhCCCceeCC------------------CcEEEEECCc--EEEEEEEEEEEEECCC
Confidence 47899999999999853 8999999998 4899999999999873
No 38
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=94.35 E-value=0.036 Score=46.43 Aligned_cols=38 Identities=11% Similarity=0.029 Sum_probs=30.5
Q ss_pred EEEEccCCCceEEcceeeeeEEEEEecCCCEEEEEcCC
Q 016600 269 LAIQPVDGDIGTIGQNFMTGYRVVFDRENLKLGWSHSN 306 (386)
Q Consensus 269 l~i~~~~~~~~IlG~~fl~~~yvvFD~e~~rIGfa~~~ 306 (386)
+.+.+...-..|||..||+.+-.+.|+++++|-|...+
T Consensus 99 ~~Vle~~~~d~LLGmD~L~~~~~~ID~~~~~L~l~~~~ 136 (148)
T 3s8i_A 99 FSILEDQPMDMLLGLDMLRRHQCSIDLKKNVLVIGTTG 136 (148)
T ss_dssp EEEETTCSSSEEECHHHHHHTTCEEETTTTEEECTTTC
T ss_pred EEEeCCCCcCeeccHHHHHhCCEEEEcCCCEEEEccCC
Confidence 44554444468999999999999999999999987643
No 39
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=92.87 E-value=0.3 Score=40.33 Aligned_cols=27 Identities=15% Similarity=0.009 Sum_probs=25.1
Q ss_pred CceEEcceeeeeEEEEEecCCCEEEEE
Q 016600 277 DIGTIGQNFMTGYRVVFDRENLKLGWS 303 (386)
Q Consensus 277 ~~~IlG~~fl~~~yvvFD~e~~rIGfa 303 (386)
-..|||..||+++.++.|.++++|-|.
T Consensus 108 ~d~iLG~d~L~~~~~~ID~~~~~l~l~ 134 (148)
T 2i1a_A 108 IDVLIGLDMLKRHLACVDLKENVLRIA 134 (148)
T ss_dssp CSEEECHHHHHHTTCEEETTTTEEEET
T ss_pred CCeEecHHHHhhCCEEEECCCCEEEEc
Confidence 458999999999999999999999996
No 40
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=49.54 E-value=12 Score=28.21 Aligned_cols=32 Identities=28% Similarity=0.458 Sum_probs=23.5
Q ss_pred eeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 160 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 160 ~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|.++ |.||.- +..+.++||||++.+.+|..
T Consensus 13 ~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 13 AQYYGE---IGIGTP---PQCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CeEEEE---EEECCC---CeEEEEEEeCCCCceEEeEc
Confidence 456665 677742 34567999999999999864
No 41
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=36.97 E-value=28 Score=32.09 Aligned_cols=30 Identities=17% Similarity=0.354 Sum_probs=23.6
Q ss_pred eeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 160 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 160 ~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|.++ |.|| ...+.++||||++.+.+|..
T Consensus 14 ~~Y~~~---i~iG-----~Q~~~v~~DTGSs~lWv~~~ 43 (325)
T 1ibq_A 14 EEYLTP---VTVG-----KSTLHLDFDTGSADLWVFSD 43 (325)
T ss_dssp SCEEEE---EEEB-----TEEEEEEEETTCCCEEEECT
T ss_pred CEEEEE---EEEC-----CEEEEEEEeCCCccceEeeC
Confidence 567665 6788 34678999999999999875
No 42
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=34.41 E-value=29 Score=31.93 Aligned_cols=30 Identities=27% Similarity=0.342 Sum_probs=23.7
Q ss_pred eeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 160 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 160 ~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|.++ |.|| +..+.++||||++.+.+|..
T Consensus 15 ~~Y~~~---i~iG-----~Q~~~v~~DTGSs~lWv~~~ 44 (323)
T 1bxo_A 15 EEYITP---VTIG-----GTTLNLNFDTGSADLWVFST 44 (323)
T ss_dssp SCEEEE---EEET-----TEEEEEEEETTCCCEEECBT
T ss_pred CEEEEE---EEEC-----CEEEEEEEeCCCcceEEecC
Confidence 567665 6788 34678999999999999975
No 43
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=32.17 E-value=34 Score=31.46 Aligned_cols=31 Identities=19% Similarity=0.264 Sum_probs=24.2
Q ss_pred ceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 159 YITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 159 ~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
...|.++ |.|| +..+.++||||++.+.+|..
T Consensus 14 ~~~Y~~~---i~iG-----~q~~~v~~DTGSs~lWv~~~ 44 (323)
T 1izd_A 14 DEEYITQ---VTVG-----DDTLGLDFDTGSADLWVFSS 44 (323)
T ss_dssp GCCEEEE---EEET-----TEEEEEEEETTCCCEEECBT
T ss_pred CCEEEEE---EEEC-----CEEEEEEEcCCCcceEEecC
Confidence 3567665 6788 34678999999999999975
No 44
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=25.60 E-value=59 Score=30.87 Aligned_cols=42 Identities=7% Similarity=-0.058 Sum_probs=28.0
Q ss_pred eeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 149 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 149 ~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|+..... ...|.++ |.||.- +..+.++||||++.+.+|-.
T Consensus 11 ~~pl~~~~~-~~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGS-TGLHWAN---LQKRTP---LMQVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTT-TCCEEEE---EEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred EEeeecCCC-CceEEEE---EECCCC---CceeEEEEECCCCceeECCC
Confidence 456653322 3567665 667742 34568999999999999854
No 45
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=24.29 E-value=70 Score=29.36 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=23.7
Q ss_pred eeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 160 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 160 ~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|.++ |.||.- ...+.++||||++.+.+|..
T Consensus 15 ~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 3c9x_A 15 SEYITS---VSIGTP---AQVLPLDFDTGSSDLWVFSS 46 (329)
T ss_dssp CCEEEE---EEETTT---TEEEEEEEETTCCCEEECBT
T ss_pred CEEEEE---EEECCC---CeEEEEEEcCCCCCeEEecC
Confidence 456655 677742 23567999999999999875
No 46
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=23.86 E-value=63 Score=30.98 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=28.9
Q ss_pred eeeeeecCCcceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 149 STSFLASNGKYITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 149 ~~p~v~~~~~~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|+..... ...|.++ |.||.- +..+.++||||+.++++|-.
T Consensus 10 ~~pv~~d~~-~~~Y~~~---i~iGTP---pq~~~v~~DTGS~~lWv~c~ 51 (413)
T 3vla_A 10 VVPVKKDAS-TLQYVTT---INQRTP---LVSENLVVDLGGRFLWVDCD 51 (413)
T ss_dssp EEEEEECTT-TCCEEEE---EEETTT---TEEEEEEEETTCSSEEEECS
T ss_pred EEEeeecCC-CCeEEEE---EEcCCC---CcceEEEEeCCChhhhcccC
Confidence 466655443 3566665 567642 34678999999999999853
No 47
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=22.82 E-value=77 Score=29.03 Aligned_cols=32 Identities=25% Similarity=0.304 Sum_probs=23.7
Q ss_pred eeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 160 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 160 ~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|.++ |.||.- ...+.++||||++.+.+|..
T Consensus 15 ~~Y~~~---i~iGTP---~Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 15 DAYITP---VQIGTP---AQTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp CCEEEE---EEETTT---TEEEEEEEETTCCCEEECBT
T ss_pred CEEEEE---EEECCC---CeEEEEEECCCCCCeEEecC
Confidence 457665 677742 23567999999999999874
No 48
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=22.29 E-value=70 Score=29.27 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=23.4
Q ss_pred eeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 160 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 160 ~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|.++ |.||.- ...+.++||||++.+.+|..
T Consensus 15 ~~Y~~~---i~iGTP---~q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 15 IEYYGQ---VTIGTP---GKKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp TEEEEE---EEETTT---TEEEEEEEETTCCCCEEEBT
T ss_pred CEEEEE---EEECCC---CeEEEEEEcCCCCCEEEccC
Confidence 567665 667742 23567999999999999864
No 49
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=21.47 E-value=57 Score=28.47 Aligned_cols=32 Identities=31% Similarity=0.566 Sum_probs=23.3
Q ss_pred eeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 160 ITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 160 ~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
..|.++ |.||.- +..+.++||||++.+.+|..
T Consensus 13 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 13 TSYFGE---IGIGTP---PQKFTVIFDTGSSVLWVPSS 44 (239)
T ss_dssp TEEEEE---EEETTT---TEEEEEEEETTCCCEEEEBT
T ss_pred CEEEEE---EEECCC---CeEEEEEEeCCCcceEEEcC
Confidence 456665 667742 23567999999999999854
No 50
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=20.48 E-value=47 Score=30.62 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=22.5
Q ss_pred eEEEEEeEEEEcCeeecCCCceEEEeccccceeeCHH
Q 016600 161 TYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPKE 197 (386)
Q Consensus 161 ~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~~ 197 (386)
.|.++ |.|| ...+.++||||++.+.+|..
T Consensus 18 ~Y~~~---i~iG-----~Q~~~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 18 QYAGI---TKIG-----NQNFLTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TSEEE---EEET-----TEEEEEEEETTCCCEEEECT
T ss_pred EEEEE---EEEC-----CEEEEEEEeCCCcceEEecC
Confidence 46555 6788 34678999999999999854
No 51
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=20.28 E-value=83 Score=29.55 Aligned_cols=27 Identities=19% Similarity=0.225 Sum_probs=20.8
Q ss_pred ceeEEEEEeEEEEcCeeecCCCceEEEeccccceeeCH
Q 016600 159 YITYIIGVETCCIGSSCLKQTSFKAIVDSGSSFTFLPK 196 (386)
Q Consensus 159 ~~~y~V~l~~i~v~~~~~~~~~~~~iiDSGTt~~~lP~ 196 (386)
...|.++ |.||.. ++||||++.+.+|-
T Consensus 13 ~~~Y~~~---i~iGtP--------v~~DTGSs~lWv~c 39 (381)
T 1t6e_X 13 TSLYTIP---FHDGAS--------LVLDVAGPLVWSTC 39 (381)
T ss_dssp TCCEEEE---EETTEE--------EEEETTCCCEEECC
T ss_pred CcEEEEE---EeCCCE--------EEEECCCCceEEeC
Confidence 3567776 556642 89999999999994
Done!