Query 016606
Match_columns 386
No_of_seqs 342 out of 1844
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 16:24:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016606.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016606hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dup_A MUTT/nudix family prote 100.0 1.2E-70 3.9E-75 537.5 34.4 281 93-383 3-285 (300)
2 2pny_A Isopentenyl-diphosphate 99.9 3.5E-26 1.2E-30 217.4 18.7 170 187-362 36-226 (246)
3 2dho_A Isopentenyl-diphosphate 99.9 5.8E-26 2E-30 214.3 18.2 171 186-362 24-215 (235)
4 1hzt_A Isopentenyl diphosphate 99.9 4.4E-23 1.5E-27 186.0 13.7 166 187-360 2-170 (190)
5 2fkb_A Putative nudix hydrolas 99.9 2.5E-22 8.6E-27 178.5 16.3 166 187-368 8-173 (180)
6 1q27_A Putative nudix hydrolas 99.9 3.7E-21 1.3E-25 169.6 15.2 148 186-345 4-152 (171)
7 1sjy_A MUTT/nudix family prote 99.8 3E-17 1E-21 141.9 17.1 129 229-365 22-154 (159)
8 1ktg_A Diadenosine tetraphosph 99.6 8.4E-15 2.9E-19 123.5 16.3 114 219-342 5-119 (138)
9 3shd_A Phosphatase NUDJ; nudix 99.6 3.8E-15 1.3E-19 128.3 13.5 98 231-338 15-112 (153)
10 2b0v_A Nudix hydrolase; struct 99.6 5.4E-15 1.8E-19 126.9 13.1 102 232-341 19-120 (153)
11 3grn_A MUTT related protein; s 99.6 1E-14 3.5E-19 125.9 14.1 121 229-364 17-137 (153)
12 3gwy_A Putative CTP pyrophosph 99.6 3.9E-15 1.3E-19 126.8 11.2 100 231-341 16-116 (140)
13 1v8y_A ADP-ribose pyrophosphat 99.6 4.4E-15 1.5E-19 131.0 10.9 121 231-362 44-165 (170)
14 3o6z_A GDP-mannose pyrophospha 99.6 8.2E-15 2.8E-19 132.8 12.7 137 219-367 47-191 (191)
15 3i7u_A AP4A hydrolase; nudix p 99.6 1.2E-14 4.2E-19 124.4 12.8 105 224-342 9-113 (134)
16 3r03_A Nudix hydrolase; struct 99.6 9.8E-15 3.3E-19 124.0 11.6 106 226-341 14-119 (144)
17 3u53_A BIS(5'-nucleosyl)-tetra 99.6 2E-14 6.9E-19 124.9 13.7 104 229-343 21-127 (155)
18 1nqz_A COA pyrophosphatase (MU 99.6 4.8E-15 1.6E-19 133.5 9.9 106 229-342 45-152 (194)
19 2pbt_A AP4A hydrolase; nudix p 99.6 2.6E-14 8.9E-19 119.7 12.7 107 222-342 7-113 (134)
20 3hhj_A Mutator MUTT protein; n 99.6 4.4E-14 1.5E-18 122.6 14.6 108 224-341 33-140 (158)
21 1rya_A GDP-mannose mannosyl hy 99.6 5.4E-14 1.8E-18 121.5 15.1 108 229-341 27-138 (160)
22 3oga_A Nucleoside triphosphata 99.6 1.1E-14 3.7E-19 127.3 10.8 105 232-341 39-149 (165)
23 2yvp_A NDX2, MUTT/nudix family 99.6 6.2E-15 2.1E-19 131.3 9.0 112 229-350 50-162 (182)
24 3e57_A Uncharacterized protein 99.6 1.7E-15 5.8E-20 141.0 5.5 140 203-356 53-200 (211)
25 3son_A Hypothetical nudix hydr 99.6 4.8E-14 1.6E-18 121.0 13.9 115 219-342 7-125 (149)
26 2o1c_A DATP pyrophosphohydrola 99.5 1E-13 3.5E-18 117.8 13.6 113 222-342 12-133 (150)
27 3i9x_A MUTT/nudix family prote 99.5 1.4E-14 4.9E-19 130.0 8.7 116 219-340 29-154 (187)
28 3eds_A MUTT/nudix family prote 99.5 1E-14 3.4E-19 126.6 7.4 103 229-343 30-137 (153)
29 4dyw_A MUTT/nudix family prote 99.5 5.4E-14 1.9E-18 122.6 12.0 101 232-340 40-140 (157)
30 2w4e_A MUTT/nudix family prote 99.5 5.8E-14 2E-18 120.9 11.1 99 246-354 30-129 (145)
31 1g0s_A Hypothetical 23.7 kDa p 99.5 8.9E-14 3.1E-18 127.9 12.8 124 230-362 68-199 (209)
32 2rrk_A ORF135, CTP pyrophospho 99.5 4.6E-14 1.6E-18 119.1 10.0 98 232-341 20-117 (140)
33 1vcd_A NDX1; nudix protein, di 99.5 1.2E-13 4.1E-18 114.7 12.3 98 229-342 11-108 (126)
34 3exq_A Nudix family hydrolase; 99.5 6.2E-14 2.1E-18 122.7 10.8 102 229-341 20-121 (161)
35 1vhz_A ADP compounds hydrolase 99.5 2.9E-14 1E-18 130.1 8.7 114 233-356 61-174 (198)
36 2pqv_A MUTT/nudix family prote 99.5 9.9E-14 3.4E-18 119.6 10.9 106 223-341 23-129 (154)
37 3ees_A Probable pyrophosphohyd 99.5 6E-14 2E-18 119.9 9.5 108 221-341 23-130 (153)
38 1mut_A MUTT, nucleoside tripho 99.5 7.2E-15 2.5E-19 122.1 2.6 101 229-341 13-113 (129)
39 1mk1_A ADPR pyrophosphatase; n 99.5 6.7E-14 2.3E-18 128.2 9.1 129 229-367 52-185 (207)
40 2azw_A MUTT/nudix family prote 99.5 2E-13 6.9E-18 116.1 10.9 107 225-343 24-132 (148)
41 3gg6_A Nudix motif 18, nucleos 99.5 8.1E-14 2.8E-18 120.5 8.3 111 221-344 21-133 (156)
42 3h95_A Nucleoside diphosphate- 99.5 3.6E-13 1.2E-17 122.3 12.9 115 221-344 28-143 (199)
43 3fcm_A Hydrolase, nudix family 99.5 4.9E-13 1.7E-17 121.0 13.6 112 225-344 51-170 (197)
44 2b06_A MUTT/nudix family prote 99.5 1.2E-13 4.1E-18 119.1 8.9 96 233-341 24-119 (155)
45 2jvb_A Protein PSU1, mRNA-deca 99.5 1E-13 3.5E-18 118.4 8.3 107 225-345 10-118 (146)
46 3q91_A Uridine diphosphate glu 99.5 1.8E-13 6E-18 127.6 10.5 113 247-365 94-212 (218)
47 1f3y_A Diadenosine 5',5'''-P1, 99.4 1.3E-13 4.3E-18 119.3 8.1 119 214-343 11-147 (165)
48 3q93_A 7,8-dihydro-8-oxoguanin 99.4 3.5E-13 1.2E-17 120.2 11.2 118 231-365 35-152 (176)
49 3id9_A MUTT/nudix family prote 99.4 7.2E-13 2.5E-17 116.3 11.7 106 222-341 26-135 (171)
50 2yyh_A MUTT domain, 8-OXO-DGTP 99.4 7.2E-13 2.4E-17 112.3 10.4 98 229-339 20-119 (139)
51 2fml_A MUTT/nudix family prote 99.4 6.3E-13 2.1E-17 127.4 10.8 116 219-342 41-158 (273)
52 3f6a_A Hydrolase, nudix family 99.4 1.6E-12 5.3E-17 113.0 12.2 106 224-341 11-133 (159)
53 2fvv_A Diphosphoinositol polyp 99.4 6.1E-13 2.1E-17 121.2 8.7 103 229-345 51-154 (194)
54 1x51_A A/G-specific adenine DN 99.4 1.4E-12 4.9E-17 112.8 9.6 99 231-341 33-133 (155)
55 2kdv_A RNA pyrophosphohydrolas 99.4 3.6E-12 1.2E-16 112.3 12.0 105 229-342 17-136 (164)
56 3gz5_A MUTT/nudix family prote 99.4 2.3E-12 8E-17 121.2 11.3 111 220-339 25-137 (240)
57 2dsc_A ADP-sugar pyrophosphata 99.4 3.2E-12 1.1E-16 117.3 11.1 116 219-343 63-185 (212)
58 1vk6_A NADH pyrophosphatase; 1 99.3 7.4E-12 2.5E-16 120.2 13.9 95 232-340 151-245 (269)
59 2fb1_A Conserved hypothetical 99.3 1E-12 3.6E-17 122.5 7.5 112 220-340 16-127 (226)
60 3cng_A Nudix hydrolase; struct 99.3 7.2E-12 2.5E-16 112.7 12.7 94 232-339 51-144 (189)
61 3fk9_A Mutator MUTT protein; s 99.3 3.1E-12 1.1E-16 115.5 10.1 104 224-340 9-113 (188)
62 2qjt_B Nicotinamide-nucleotide 99.3 1.1E-11 3.9E-16 121.0 14.9 124 232-361 219-346 (352)
63 1u20_A U8 snoRNA-binding prote 99.3 1.6E-12 5.3E-17 120.0 7.6 125 229-367 53-196 (212)
64 2qjo_A Bifunctional NMN adenyl 99.3 8.1E-12 2.8E-16 121.3 12.7 107 232-341 214-322 (341)
65 3q1p_A Phosphohydrolase (MUTT/ 99.3 3.4E-12 1.2E-16 116.7 8.1 110 220-342 69-179 (205)
66 3o8s_A Nudix hydrolase, ADP-ri 99.3 2.4E-12 8.2E-17 117.8 6.9 118 211-342 62-180 (206)
67 2a6t_A SPAC19A8.12; alpha/beta 99.3 1.2E-11 4E-16 118.7 11.3 103 229-344 111-215 (271)
68 3fjy_A Probable MUTT1 protein; 99.3 8.7E-12 3E-16 123.5 9.0 106 229-343 35-160 (364)
69 3f13_A Putative nudix hydrolas 99.3 2.4E-11 8.1E-16 107.6 10.8 82 233-335 28-109 (163)
70 1k2e_A Nudix homolog; nudix/MU 99.2 2.9E-11 9.8E-16 105.0 10.3 100 224-340 6-118 (156)
71 3qsj_A Nudix hydrolase; struct 99.2 1.7E-10 5.9E-15 108.6 14.6 128 232-363 24-210 (232)
72 3fsp_A A/G-specific adenine gl 99.1 7.6E-11 2.6E-15 117.5 9.4 122 220-363 240-361 (369)
73 2xsq_A U8 snoRNA-decapping enz 99.1 2.1E-10 7.1E-15 106.6 8.6 126 233-370 66-207 (217)
74 1q33_A Pyrophosphatase, ADP-ri 99.0 2.5E-09 8.7E-14 103.5 12.3 122 232-367 139-281 (292)
75 3kvh_A Protein syndesmos; NUDT 98.6 8.7E-08 3E-12 87.9 6.8 151 203-370 6-183 (214)
76 3bho_A Cleavage and polyadenyl 97.8 0.00016 5.4E-09 66.7 11.2 104 225-340 66-184 (208)
77 3rh7_A Hypothetical oxidoreduc 97.5 7.1E-05 2.4E-09 73.4 5.0 89 222-340 186-275 (321)
No 1
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=100.00 E-value=1.2e-70 Score=537.53 Aligned_cols=281 Identities=41% Similarity=0.721 Sum_probs=265.1
Q ss_pred HHHHHHHHHhcCCCCCCCCeeeEEECCEEEeeecHHHHHHhhcCCCeEEEeCCCCCcccceEEeccCCCCHHHHHHHHHH
Q 016606 93 RGYFEKIKICNRGSEMQSEFFPFIIEDQVAGYTHNRFASHLRKYDDVFIYSGNNGGRFGSHVKLNSKLKTADERTRVVGE 172 (386)
Q Consensus 93 ~~~~~~i~~cn~~~~~~~~~~pf~~~g~~vG~i~p~~~~~L~~~~~~f~~~~~~~~~~~~~v~L~~~~~~~~~rt~~~~~ 172 (386)
|+|+++|++||+| .++.|+||+++|++||||+|.+++.|.+|+..|.++ .+.|+|.+.+.++++||+++++
T Consensus 3 m~~l~~i~~~~~~--~~~~~~~f~~~g~~~G~i~~~~~~~l~~~~~~~~~~-------~~~v~l~~~~~~~~~rt~~~~~ 73 (300)
T 3dup_A 3 LSFLKHVQDCNTH--DLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVT-------RDAVLLSASLRTPQSRTRAVAD 73 (300)
T ss_dssp CCHHHHHHHTTCC--CCTTEEEEEETTEEEEEEEHHHHHHHTTCTTTEEEC-------SSEEEECTTCCSHHHHHHHHHH
T ss_pred ccHHHHHHHHcCC--ChhhcEEEEECCEEEEeECHHHHHHHhcCCCceEee-------CCEEEEecCCCCHHHHHHHHHH
Confidence 6899999999999 578899999999999999999999999999999876 3579999999999999999999
Q ss_pred HHHHHHHcCCCCCCCcceeecccCCCCceeEEEeccccccCCccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCcccc
Q 016606 173 VIKCLAEEELIPDIQNELYPVASTFGSPIFFSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDI 252 (386)
Q Consensus 173 v~~~l~~~g~~~gwr~E~~~V~~~~g~~~l~~ieRaa~~~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~ 252 (386)
+++.|+++|+++|||||+|+|||++|+++++.+||++++++|+.|||||+++|+.++++.+|||||||.+|++|||+||+
T Consensus 74 ~~~~~~~~g~~~gwr~E~~~V~~~~~~~~~~~~eR~~~~~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~ 153 (300)
T 3dup_A 74 VVDRLADEGVVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDN 153 (300)
T ss_dssp HHHHHHHTTSSCCCCSCEEEECSSTTSCCCEEEEGGGTGGGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEE
T ss_pred HHHHHHHcCCCCccccccEEeecCCCCeeeEEEEhhhccccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCcccc
Confidence 99999999999999999999999998889999999999999999999999999976556699999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEE
Q 016606 253 LAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQL 332 (386)
Q Consensus 253 ~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~w 332 (386)
+||||+++||++.+||+||+.||+||+.+..+.+.++|.++|.+..+.|+.+|++|+|++.++.++.|.++++||++++|
T Consensus 154 svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~ 233 (300)
T 3dup_A 154 MVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFML 233 (300)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEEEEE
T ss_pred ccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhheEEE
Confidence 99999999999999999999999999987665678899999988777778899999999999988889999999999999
Q ss_pred EcHHHHHHHHHc-CCCCCCCcHHHHHHHHHHcCCCCCCC-CCHHHHHHhcccC
Q 016606 333 MPVAHVANVIRR-TEFFKPNCSLAIIDFLFRHGYIRPEY-FGYLDLLQSLRRG 383 (386)
Q Consensus 333 v~~dEv~~~l~~-~~~fkpn~alVlldfl~RhG~i~p~~-~~y~ei~~~l~r~ 383 (386)
++++|+.+++.+ + .|||||++|++|||+|||+|+|+| |+|.+|+++|||+
T Consensus 234 v~~~El~~~l~~pg-~F~p~~~lV~ldfl~RhG~i~~~~~~~y~~i~~~l~r~ 285 (300)
T 3dup_A 234 WPAAKVVEAVRTTE-AFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGR 285 (300)
T ss_dssp EEHHHHHHHHHHCC-CBCTTHHHHHHHHHHHTTSSCTTTSTTHHHHHHHTBCC
T ss_pred ECHHHHHHHHhcCC-CcCccHHHHHHHHHHHhCCcCCccCCCHHHHHHHhccC
Confidence 999999999998 5 799999999999999999999997 8999999999986
No 2
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.94 E-value=3.5e-26 Score=217.37 Aligned_cols=170 Identities=13% Similarity=0.123 Sum_probs=141.4
Q ss_pred CcceeecccCCCCceeEEEeccccc-----cCCccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCC
Q 016606 187 QNELYPVASTFGSPIFFSLDRAAAP-----YFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHG 261 (386)
Q Consensus 187 r~E~~~V~~~~g~~~l~~ieRaa~~-----~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aG 261 (386)
++|+++|||++| ++++.++|..++ ..|+.|.++++..+ +.+++|||+||+..|.+|||+||+++||++++|
T Consensus 36 ~~E~~~lvd~~~-~~iG~~~r~~~h~~~~~~~g~~h~av~v~v~---~~~g~lLLqrRs~~K~~~pG~W~~p~gG~v~~G 111 (246)
T 2pny_A 36 LEEMLIVVDEND-KVIGADTKRNCHLNENIEKGLLHRAFSVVLF---NTKNRILIQQRSDTKVTFPGYFTDSCSSHPLYN 111 (246)
T ss_dssp TTCEEEEECTTC-CEEEEEEHHHHTBHHHHTTTCCEEEEEEEEE---CTTCCEEEEEECTTCSSSTTCBCCSEEECCBSS
T ss_pred ccceEEEEcCCC-CEEEEEEhHHhccccccCCCcEEEEEEEEEE---eCCCEEEEEEecCCCCCCCCceEeccCceeccC
Confidence 689999999998 688999999998 56888888877554 455689999999999999999999999999999
Q ss_pred ------CCH---HHHHHHHHHhhhCCCcccc--CCceeeEEEEEEeeCCCee-eeEEEEEEEEEcCCCcccCCCCCceee
Q 016606 262 ------IAC---GENIIKECEEEAGIPRSIS--NRARPVGAVSYTDINGFSY-KRDVIFCYDLKLPEDFVPMNQDGEVES 329 (386)
Q Consensus 262 ------Es~---~eAa~REl~EEaGL~~~~~--~~l~~vg~isy~~~~~~gi-~~ev~~vYdl~l~~d~~p~~~dgEV~~ 329 (386)
|++ ++||+||+.||+||+++.+ ..+.+++.+.|......++ ..++.++|.+..+.+ +.++++||.+
T Consensus 112 ~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~--~~~~~~Ev~~ 189 (246)
T 2pny_A 112 PAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVT--LNPDPSETKS 189 (246)
T ss_dssp HHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCCC--CCCCTTTEEE
T ss_pred CcccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECCC--CCCChHHeeE
Confidence 897 9999999999999997632 2367888888876544332 457788888887543 5667889999
Q ss_pred EEEEcHHHHHHHHHc---C-CCCCCCcHHHHHHHHHH
Q 016606 330 FQLMPVAHVANVIRR---T-EFFKPNCSLAIIDFLFR 362 (386)
Q Consensus 330 f~wv~~dEv~~~l~~---~-~~fkpn~alVlldfl~R 362 (386)
++|++++|+.+++.+ + ..|+|+..+++.+||.+
T Consensus 190 ~~wv~~eel~~~l~~~~~~~~~ftp~~~~i~~~~l~~ 226 (246)
T 2pny_A 190 ILYLSQEELWELLEREARGEVKVTPWLRTIAERFLYR 226 (246)
T ss_dssp EEEECHHHHHHHHHHHHHTSSCBCHHHHHHHHHTHHH
T ss_pred EEEEeHHHHHHHHHhccCCCceECHhHHHHHHHHHHH
Confidence 999999999999986 3 36999999988888765
No 3
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.94 E-value=5.8e-26 Score=214.31 Aligned_cols=171 Identities=12% Similarity=0.174 Sum_probs=141.5
Q ss_pred CCcceeecccCCCCceeEEEeccccc-----cCCccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCC
Q 016606 186 IQNELYPVASTFGSPIFFSLDRAAAP-----YFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPH 260 (386)
Q Consensus 186 wr~E~~~V~~~~g~~~l~~ieRaa~~-----~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~a 260 (386)
-++|+++|||++| .+++.++|..++ ..|+.+++|++..+ +.+++|||+||+..|.+|||+|++++||++++
T Consensus 24 ~~~E~~~lvd~~~-~~~G~~~r~~~h~~~~~~~g~~h~av~v~v~---~~~g~lLLq~R~~~k~~~pg~W~~p~gG~v~~ 99 (235)
T 2dho_A 24 LLAEMCILIDEND-NKIGAETKKNCHLNENIEKGLLHRAFSVFLF---NTENKLLLQQRSDAKITFPGCFTNTCCSHPLS 99 (235)
T ss_dssp SSCCEEEEECTTC-CEEEEEEHHHHTBHHHHTTTCCEEEEEEEEE---CTTCCEEEEEECTTCSSSTTCEESSEEECCBS
T ss_pred hcCcEEEEEcCCC-CEEEEEEhHHhccccccCCCceEEEEEEEEE---cCCCEEEEEEecCcCCCCCCcEEeccCceecC
Confidence 4799999999998 688999999988 56888888877554 45568999999999999999999998999999
Q ss_pred C------CC---HHHHHHHHHHhhhCCCcccc--CCceeeEEEEEEeeCCCee-eeEEEEEEEEEcCCCcccCCCCCcee
Q 016606 261 G------IA---CGENIIKECEEEAGIPRSIS--NRARPVGAVSYTDINGFSY-KRDVIFCYDLKLPEDFVPMNQDGEVE 328 (386)
Q Consensus 261 G------Es---~~eAa~REl~EEaGL~~~~~--~~l~~vg~isy~~~~~~gi-~~ev~~vYdl~l~~d~~p~~~dgEV~ 328 (386)
| |+ +.+||+||+.||+||.++.+ ..+.+++.+.|......++ ..++.++|.+..+.+ +.++++||.
T Consensus 100 Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~--~~~~~~Ev~ 177 (235)
T 2dho_A 100 NPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNVT--LNPDPNEIK 177 (235)
T ss_dssp SHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCCC--CCCCTTTEE
T ss_pred CCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECCC--CcCChHHEE
Confidence 9 88 49999999999999997632 2367888888877544332 457788888887543 566789999
Q ss_pred eEEEEcHHHHHHHHHc---C-CCCCCCcHHHHHHHHHH
Q 016606 329 SFQLMPVAHVANVIRR---T-EFFKPNCSLAIIDFLFR 362 (386)
Q Consensus 329 ~f~wv~~dEv~~~l~~---~-~~fkpn~alVlldfl~R 362 (386)
+++|++++|+.+++.+ + ..|+|+..+++.+||..
T Consensus 178 ~~~wv~~~el~~~l~~~~~~~~~ftp~~~~i~~~~L~~ 215 (235)
T 2dho_A 178 SYCYVSKEELKELLKKAASGEIKITPWFKIIAATFLFK 215 (235)
T ss_dssp EEEEECHHHHHHHHHHHHTTSSCBCHHHHHHHHHTHHH
T ss_pred EEEEEcHHHHHHHHhhccCCCcEECHhHHHHHHHHHHH
Confidence 9999999999999986 3 26999999888888765
No 4
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.89 E-value=4.4e-23 Score=185.98 Aligned_cols=166 Identities=18% Similarity=0.171 Sum_probs=102.9
Q ss_pred CcceeecccCCCCceeEEEeccccc-cCCccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHH
Q 016606 187 QNELYPVASTFGSPIFFSLDRAAAP-YFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACG 265 (386)
Q Consensus 187 r~E~~~V~~~~g~~~l~~ieRaa~~-~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~ 265 (386)
.+|+++|||.+| .+++.++|..++ ..|+.+.+|.+..+ +.++++|+++|+..+..+||+|++++||+++.|||++
T Consensus 2 ~~E~~~v~d~~~-~~~g~~~r~~~~~~~~~~~~~v~~~i~---~~~g~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~ 77 (190)
T 1hzt_A 2 QTEHVILLNAQG-VPTGTLEKYAAHTADTRLHLAFSSWLF---NAKGQLLVTRRALSKKAWPGVWTNSVCGHPQLGESNE 77 (190)
T ss_dssp ------------------------------CEECEEEEEE---CTTCCEEEEEECTTCSSSTTCEEESEEECCCTTCCHH
T ss_pred CceEEEEECCCC-CEeeeEEHhhhcccCCceEEEEEEEEE---cCCCEEEEEEeCCCCCCCCCcccCcccccCCCCCCHH
Confidence 469999999998 677889999999 88887776665333 4456899999998888999999986899999999999
Q ss_pred HHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCe-eeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHc
Q 016606 266 ENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFS-YKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRR 344 (386)
Q Consensus 266 eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~g-i~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~ 344 (386)
+||+||++|||||.+... ...++.+.|......+ ....+.++|.+..+.. +.++++|+.+++|++++|+.+++.+
T Consensus 78 ~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~--~~~~~~E~~~~~W~~~~el~~~~~~ 153 (190)
T 1hzt_A 78 DAVIRRCRYELGVEITPP--ESIYPDFRYRATDPSGIVENEVCPVFAARTTSA--LQINDDEVMDYQWCDLADVLHGIDA 153 (190)
T ss_dssp HHHHHHHHHHHCCCBSCC--EEEETTCEEEEECTTSCEEEEECCEEEEEBCSC--CCCCTTTEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCchhh--heeeeeEEEEeeCCCCCcceEEEEEEEEecCCC--CcCCccceeeEEEecHHHHHHHHHc
Confidence 999999999999998753 1556666665432222 2235567788877654 4456789999999999999999987
Q ss_pred CC-CCCCCcHHHHHHHH
Q 016606 345 TE-FFKPNCSLAIIDFL 360 (386)
Q Consensus 345 ~~-~fkpn~alVlldfl 360 (386)
+. .|.|....++-.++
T Consensus 154 ~~~~~~p~~~~~~~~~~ 170 (190)
T 1hzt_A 154 TPWAFSPWMVMQATNRE 170 (190)
T ss_dssp CGGGBCHHHHHHHHSHH
T ss_pred ChhhcCchHHHHHHHHH
Confidence 52 47776655444443
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.89 E-value=2.5e-22 Score=178.52 Aligned_cols=166 Identities=20% Similarity=0.177 Sum_probs=126.4
Q ss_pred CcceeecccCCCCceeEEEeccccccCCccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHH
Q 016606 187 QNELYPVASTFGSPIFFSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGE 266 (386)
Q Consensus 187 r~E~~~V~~~~g~~~l~~ieRaa~~~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~e 266 (386)
.+|+|+|+|.+| .+++.++|..++..|+.+.++.+..+ +.++++|+++|+..+..+||+|++++||+++.||++.+
T Consensus 8 ~~E~~~i~d~~~-~~~g~~~r~~~~~~~~~~~~~~v~i~---~~~~~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~ 83 (180)
T 2fkb_A 8 STEWVDIVNEEN-EVIAQASREQMRAQCLRHRATYIVVH---DGMGKILVQRRTETKDFLPGMLDATAGGVVQADEQLLE 83 (180)
T ss_dssp CCCEEEEECTTS-CEEEEEEHHHHHHHTCCEEEEEEEEE---CSSSCEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHH
T ss_pred CCeeEEEECCCC-CEeeEEEHHHhhccCceeeEEEEEEE---CCCCEEEEEECCCCCccCCCcEEeecCCCCCCCCCHHH
Confidence 689999999988 67889999999999998776655433 44458999999998888999999878999999999999
Q ss_pred HHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHcCC
Q 016606 267 NIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRRTE 346 (386)
Q Consensus 267 Aa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~ 346 (386)
||+||+.||+||.... +..++.+.+.... .....++|.+..... +.++++|+.++.|++++++.+++.
T Consensus 84 aa~REl~EEtGl~~~~---~~~l~~~~~~~~~----~~~~~~~f~~~~~~~--~~~~~~E~~~~~W~~~~el~~~~~--- 151 (180)
T 2fkb_A 84 SARREAEEELGIAGVP---FAEHGQFYFEDKN----CRVWGALFSCVSHGP--FALQEDEVSEVCWLTPEEITARCD--- 151 (180)
T ss_dssp HHHHHHHHHHCCBSCC---CEEEEEEEEEETT----EEEEEEEEEEECCCC--CCCCTTTEEEEEEECHHHHHTTGG---
T ss_pred HHHHHHHHHHCCCccc---eEEEEEEEecCCC----ceEEEEEEEEecCCC--cCCChhHhheEEEecHHHHHHHHH---
Confidence 9999999999998764 4556665554321 234567777775433 445678999999999999998775
Q ss_pred CCCCCcHHHHHHHHHHcCCCCC
Q 016606 347 FFKPNCSLAIIDFLFRHGYIRP 368 (386)
Q Consensus 347 ~fkpn~alVlldfl~RhG~i~p 368 (386)
.|.|....++..++.+++-..+
T Consensus 152 ~~~~~~~~~l~~~~~~~~~~~~ 173 (180)
T 2fkb_A 152 EFTPDSLKALALWMKRNAKNEA 173 (180)
T ss_dssp GBCHHHHHHHHHHHHHC-----
T ss_pred HhCCcHHHHHHHHHHhhcCCCc
Confidence 3667666666677777665443
No 6
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.86 E-value=3.7e-21 Score=169.62 Aligned_cols=148 Identities=20% Similarity=0.331 Sum_probs=110.9
Q ss_pred CCcceeecccCCCCceeEEEeccccccCCccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHH
Q 016606 186 IQNELYPVASTFGSPIFFSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACG 265 (386)
Q Consensus 186 wr~E~~~V~~~~g~~~l~~ieRaa~~~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~ 265 (386)
-++|+++|||.+| .+++.++|..++++.-.+.++.+ ++. +.++++|++||+..+..+||+|++++||+++.|||+.
T Consensus 4 ~~~E~~~~~d~~~-~~~g~~~r~~~~l~~~~~~~v~v--~i~-~~~~~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~ 79 (171)
T 1q27_A 4 VSDERLDLVNERD-EVVGQILRTDPALRWERVRVVNA--FLR-NSQGQLWIPRRSPSKSLFPNALDVSVGGAVQSGETYE 79 (171)
T ss_dssp CCSSEEEEESSSS-CEEEEEESSCTTSCTTSCEEEEE--EEE-ETTTEEEECCSCCSSSCCCCSCCCSEEEECSSSSCHH
T ss_pred ccceeeeeecCCC-CEeceEEhhhhccccccceEEEE--EEE-CCCCeEEEEEecCCCCCCCCccccccCccccCCCCHH
Confidence 4899999999998 57788999998333222333333 233 3345899999998888899999877899999999999
Q ss_pred HHHHHHHHhhhCCCccccCCceeeEEEE-EEeeCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHc
Q 016606 266 ENIIKECEEEAGIPRSISNRARPVGAVS-YTDINGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRR 344 (386)
Q Consensus 266 eAa~REl~EEaGL~~~~~~~l~~vg~is-y~~~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~ 344 (386)
+||+||+.||||+.+.... +.+++.+. |.... . .+.++|.+..... +.++++|+.+++|++++|+.+++..
T Consensus 80 ~aa~REl~EEtGl~~~~~~-l~~~~~~~~~~~~~----~-~~~~~f~~~~~~~--~~~~~~E~~~~~W~~~~el~~~~~~ 151 (171)
T 1q27_A 80 EAFRREAREELNVEIDALS-WRPLASFSPFQTTL----S-SFMCVYELRSDAT--PIFNPNDISGGEWLTPEHLLARIAA 151 (171)
T ss_dssp HHHHHHHHHHHSCTTSSSC-EEEEEEECSSSSCC----S-SEEEEEEEECCCC--CCSCTTTCSCCEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCcccccc-eEEEEEEeccCCCC----c-cEEEEEEEEECCc--cccCchhhheEEEecHHHHHHHHhc
Confidence 9999999999999987643 55655443 32221 1 2567787777433 4456789999999999999998775
Q ss_pred C
Q 016606 345 T 345 (386)
Q Consensus 345 ~ 345 (386)
.
T Consensus 152 ~ 152 (171)
T 1q27_A 152 G 152 (171)
T ss_dssp H
T ss_pred C
Confidence 3
No 7
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.75 E-value=3e-17 Score=141.94 Aligned_cols=129 Identities=12% Similarity=0.114 Sum_probs=94.8
Q ss_pred CCceEEEEEEeCCC--CCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEE
Q 016606 229 DGQKFLWIGKRSQV--KSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDV 306 (386)
Q Consensus 229 dg~~~llIqrRS~~--K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev 306 (386)
+.++++|+.+|+.. +..++|+|++ +||+++.||++.+||+||+.||+|+.+.. ...++.+.+.+..+ ....
T Consensus 22 ~~~~~vLl~~r~~~~~~~~~~~~w~~-PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~l~~~~~~~~~~---~~~~ 94 (159)
T 1sjy_A 22 NERGDILLVQEKGIPGHPEKAGLWHI-PSGAVEDGENPQDAAVREACEETGLRVRP---VKFLGAYLGRFPDG---VLIL 94 (159)
T ss_dssp CTTCCEEEEEESCC----CCCCCEEC-SEEECCTTSCHHHHHHHHHHHHHSCCEEE---EEEEEEEEEECTTS---CEEE
T ss_pred eCCCCEEEEEecccCcCCCCCCeEEC-CccccCCCCCHHHHHHHHHHHHHCcccee---eEEEEEEecccCCC---ceEE
Confidence 44568999999863 5678999975 69999999999999999999999999865 45666666554332 2356
Q ss_pred EEEEEEEcCCCcccCC-CCCceeeEEEEcHHHHHHHHHcCCCCCCCcHH-HHHHHHHHcCC
Q 016606 307 IFCYDLKLPEDFVPMN-QDGEVESFQLMPVAHVANVIRRTEFFKPNCSL-AIIDFLFRHGY 365 (386)
Q Consensus 307 ~~vYdl~l~~d~~p~~-~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~al-Vlldfl~RhG~ 365 (386)
.++|.+....+..+.+ +++|+.++.|++++|+.+++..+ .++..... .+.+++.+.|+
T Consensus 95 ~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 154 (159)
T 1sjy_A 95 RHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAAG-QIRMYQTKLFYADALREKGF 154 (159)
T ss_dssp EEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHTT-CBSCTHHHHHHHHHHHHHTC
T ss_pred EEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhcc-cchhhhhHHHHHHHHhcCCC
Confidence 6778887754432454 67899999999999999999876 46555444 44555555554
No 8
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.63 E-value=8.4e-15 Score=123.53 Aligned_cols=114 Identities=17% Similarity=0.122 Sum_probs=80.9
Q ss_pred eeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCc-eeeEEEEEEee
Q 016606 219 AVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRA-RPVGAVSYTDI 297 (386)
Q Consensus 219 gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l-~~vg~isy~~~ 297 (386)
++.+..+...++++++|+.||+. .||+|+. +||+++.||++.+||+||+.||+|+.++..... .+.+.+.|...
T Consensus 5 ~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~~-PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~~ 79 (138)
T 1ktg_A 5 AAGLVIYRKLAGKIEFLLLQASY----PPHHWTP-PKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEAK 79 (138)
T ss_dssp EEEEEEEEEETTEEEEEEEEESS----TTCCEES-SEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEET
T ss_pred EEEEEEEEecCCCcEEEEEEccC----CCCcEeC-CccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEeC
Confidence 34444443334567899999862 3689975 699999999999999999999999976654322 34455555543
Q ss_pred CCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 298 NGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 298 ~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
. .....++|.+.+..+ .+..+++|+.+++|++++|+.+++
T Consensus 80 ~----~~~~~~~f~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~ 119 (138)
T 1ktg_A 80 G----KPKSVKYWLAKLNNP-DDVQLSHEHQNWKWCELEDAIKIA 119 (138)
T ss_dssp T----EEEEEEEEEEEECSC-CCCCCCTTEEEEEEECHHHHHHHH
T ss_pred C----CceEEEEEEEEecCC-cccCCCchhcEeEeccHHHHHHhh
Confidence 1 124566777777653 234457899999999999999875
No 9
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.62 E-value=3.8e-15 Score=128.26 Aligned_cols=98 Identities=11% Similarity=0.147 Sum_probs=76.3
Q ss_pred ceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEE
Q 016606 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCY 310 (386)
Q Consensus 231 ~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vY 310 (386)
++++|+.||+ ...+|.|. ++||+++.|||+.+||+||+.||||+.+.. ...++.+.|.+... ...+.++|
T Consensus 15 ~~~vLl~~r~---~~~~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~---~~~~~~~f 84 (153)
T 3shd_A 15 EGKFLVVEET---INGKALWN-QPAGHLEADETLVEAAARELWEETGISAQP---QHFIRMHQWIAPDK---TPFLRFLF 84 (153)
T ss_dssp TTEEEEEEEE---ETTEEEEE-CSEEECCTTCCHHHHHHHHHHHHHCCCCCC---CEEEEEEEECCTTS---CCEEEEEE
T ss_pred CCEEEEEEec---CCCCCCEE-CCeEEeCCCCCHHHHHHHHHHHHHCccccc---CcEEEEEEEecCCC---ceEEEEEE
Confidence 3489999987 34678997 469999999999999999999999999876 44566665555432 23556778
Q ss_pred EEEcCCCcccCCCCCceeeEEEEcHHHH
Q 016606 311 DLKLPEDFVPMNQDGEVESFQLMPVAHV 338 (386)
Q Consensus 311 dl~l~~d~~p~~~dgEV~~f~wv~~dEv 338 (386)
.+....+..+.++++|+.+++|++++|+
T Consensus 85 ~~~~~~~~~~~~~~~E~~~~~W~~~~el 112 (153)
T 3shd_A 85 AIELEQICPTQPHDSDIDCCRWVSAEEI 112 (153)
T ss_dssp EEECSSCCCCCCCSTTCCEEEEECHHHH
T ss_pred EEEccccCcCCCCcccceeeEEecHHHh
Confidence 8887665435566789999999999999
No 10
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.61 E-value=5.4e-15 Score=126.86 Aligned_cols=102 Identities=12% Similarity=0.010 Sum_probs=76.3
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYd 311 (386)
+++|+.||+..+. +|+|+. +||+++.||++.+||+||+.|||||.+.. ...++.+.|...... . ..+.++|.
T Consensus 19 ~~vLl~~r~~~~~--~~~w~l-PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~~-~-~~~~~~f~ 90 (153)
T 2b0v_A 19 DKYLLVEEIPRGT--AIKLNQ-PAGHLEPGESIIQACSREVLEETGHSFLP---EVLTGIYHWTCASNG-T-TYLRFTFS 90 (153)
T ss_dssp TEEEEEEECSSSS--CCEEEC-SEEECCTTSCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEETTTT-E-EEEEEEEE
T ss_pred CEEEEEEEcCCCC--CCeEEC-CCcCcCCCCCHHHHHHHHHHHhhCcEecc---ceEEEEEEEeCCCCC-c-EEEEEEEE
Confidence 4899999977543 899976 59999999999999999999999999865 455666666554321 1 23456676
Q ss_pred EEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 312 LKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 312 l~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
+....+.....+++|+.+++|++++|+.++
T Consensus 91 ~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 120 (153)
T 2b0v_A 91 GQVVSFDPDRKLDTGIVRAAWFSIDEIRAK 120 (153)
T ss_dssp EEEEEECTTSCCCTTEEEEEEEEHHHHHHT
T ss_pred EEeCCCCCCCCCCCCeeeEEEecHHHHhhh
Confidence 665433222445789999999999999997
No 11
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.60 E-value=1e-14 Score=125.92 Aligned_cols=121 Identities=16% Similarity=0.178 Sum_probs=86.6
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
+.++++|+.+|+..+..++|+|++ +||+++.||++.+||+||+.||+|+.+... ..++.+.+.+... ..+.+
T Consensus 17 ~~~~~vLL~~r~~~~~~~~g~w~~-PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~---~~~~~~~~~~~~~----~~~~~ 88 (153)
T 3grn_A 17 NEKGEFLLLRRSENSRTNAGKWDL-PGGKVNPDESLKEGVAREVWEETGITMVPG---DIAGQVNFELTEK----KVIAI 88 (153)
T ss_dssp CTTCCEEEEEECTTCSSSTTCEEC-SEEECCTTCCHHHHHHHHHHHHHCCCCCCC---SEEEEEEEECSSC----EEEEE
T ss_pred cCCCcEEEEEEcCCCCCCCCeEEC-ceeecCCCCCHHHHHHhhhhhhhCcEeecc---eEEEEEEEecCCc----eEEEE
Confidence 555689999999887889999985 599999999999999999999999998763 3556665554321 24566
Q ss_pred EEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHHHHcC
Q 016606 309 CYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFLFRHG 364 (386)
Q Consensus 309 vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl~RhG 364 (386)
+|.+....+ .+.+ +.|+.+++|++++++.++. .+ +.....++..+.+..
T Consensus 89 ~~~~~~~~~-~~~~-~~e~~~~~W~~~~el~~~~----~~-~~~~~~~l~~l~~~~ 137 (153)
T 3grn_A 89 VFDGGYVVA-DVKL-SYEHIEYSWVSLEKILGME----TL-PAYFRDFFERFDREN 137 (153)
T ss_dssp EEEEEECCC-CCCC-CTTEEEEEEECHHHHTTCS----SS-CHHHHHHHHHHHHHH
T ss_pred EEEEEecCC-cEec-CCCcceEEEEEHHHhhhcc----cc-hHHHHHHHHHHhccc
Confidence 777665433 2332 3799999999999997631 13 333444555555543
No 12
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.60 E-value=3.9e-15 Score=126.77 Aligned_cols=100 Identities=15% Similarity=0.050 Sum_probs=71.4
Q ss_pred ceEEEEEEeCCCCCC-CCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEE
Q 016606 231 QKFLWIGKRSQVKST-YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFC 309 (386)
Q Consensus 231 ~~~llIqrRS~~K~t-~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~v 309 (386)
++++|+.||+..+.+ ++|+|.. +||+++.||++.+||+||+.||+||.+.. ...++.+.+.+.. ....+++
T Consensus 16 ~~~vLL~~r~~~~~~~~~g~w~l-PgG~ve~gE~~~~aa~REl~EE~Gl~~~~---~~~~~~~~~~~~~----~~~~~~~ 87 (140)
T 3gwy_A 16 GEKYLCVQRGQTKFSYTSFRYEF-PGGKVEEGESLQEALQREIMEEMDYVIEV---GEKLLTVHHTYPD----FEITMHA 87 (140)
T ss_dssp TTEEEEEEC---------CCEEC-SEEECCTTCCHHHHHHHHHHHHHCCCEEE---EEEEEEEECCCSS----CCEEEEE
T ss_pred CCEEEEEEecCCCCCCCCCeEEC-CCccCCCCCCHHHHHHHHHHHhhCcEEEe---ceEEEEEEEEeCC----ceEEEEE
Confidence 358999999876543 8999975 69999999999999999999999998865 4456655544432 1245677
Q ss_pred EEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 310 YDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 310 Ydl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
|.+....+ .++.+|+.+++|++++|+.++
T Consensus 88 f~~~~~~~---~~~~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 88 FLCHPVGQ---RYVLKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp EEEEECCS---CCCCCSSCEEEEECHHHHTTS
T ss_pred EEEEecCC---cccccccceeEeccHHHHhhC
Confidence 88877653 233568999999999998764
No 13
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.59 E-value=4.4e-15 Score=131.00 Aligned_cols=121 Identities=11% Similarity=0.052 Sum_probs=78.7
Q ss_pred ceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEE
Q 016606 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCY 310 (386)
Q Consensus 231 ~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vY 310 (386)
++++|+.+|.... .++|+|+. |||+++.|||+++||+||+.||||+ +.. +.+++.+.. ..+ ......++|
T Consensus 44 ~~~vLL~~~~r~~-~~~~~w~l-PgG~ve~gEs~~~aa~REl~EEtGl-~~~---~~~l~~~~~--~~~--~~~~~~~~f 113 (170)
T 1v8y_A 44 EGRMLFVRQMRPA-VGLAPLEI-PAGLIEPGEDPLEAARRELAEQTGL-SGD---LTYLFSYFV--SPG--FTDEKTHVF 113 (170)
T ss_dssp TTEEEEEECCBTT-TTBCCBBC-SEEECCTTCCHHHHHHHHHHHHHSE-EEE---EEEEEEEES--CTT--TBCCEEEEE
T ss_pred CCEEEEEEEEeCC-CCCCEEEC-CccccCCCCCHHHHHHHHHHHHHCC-CcC---ceeeEEEec--CCC--ccccEEEEE
Confidence 4478888775543 57899975 6999999999999999999999999 653 455554422 111 122445666
Q ss_pred EEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHcCCCCC-CCcHHHHHHHHHH
Q 016606 311 DLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRRTEFFK-PNCSLAIIDFLFR 362 (386)
Q Consensus 311 dl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fk-pn~alVlldfl~R 362 (386)
.+....+..+..+++|+.++.|++++|+.+++.++ .+. ....++.+.++.+
T Consensus 114 ~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~~~~~~~al~~~~~ 165 (170)
T 1v8y_A 114 LAENLKEVEAHPDEDEAIEVVWMRPEEALERHQRG-EVEFSATGLVGVLYYHA 165 (170)
T ss_dssp EEEEEEECC--------CEEEEECHHHHHHHHHTT-SCCBCHHHHHHHHHHHH
T ss_pred EEEeccccCCCCCCCceEEEEEEEHHHHHHHHHCC-CEecCHHHHHHHHHHHH
Confidence 66543222234457899999999999999999986 566 4455555555443
No 14
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.59 E-value=8.2e-15 Score=132.77 Aligned_cols=137 Identities=12% Similarity=0.146 Sum_probs=93.6
Q ss_pred eeeEEEEEEECCceEEEEEEeCCC----CCC-CCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEE
Q 016606 219 AVPLNGYVEKDGQKFLWIGKRSQV----KST-YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS 293 (386)
Q Consensus 219 gVHl~~yv~~dg~~~llIqrRS~~----K~t-~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~is 293 (386)
+|.+..+ .+.++++++.++... +.. .+|.|+. |||+++ ||++++||+||+.||||+.+.. +..++.+.
T Consensus 47 av~v~~~--~~~~~~vlLv~~~r~~~~~~~~~~~~~w~l-PgG~ve-gE~~~~aa~REl~EEtG~~~~~---~~~l~~~~ 119 (191)
T 3o6z_A 47 GATILLY--NTKKKTVVLIRQFRVATWVNGNESGQLIES-CAGLLD-NDEPEVCIRKEAIEETGYEVGE---VRKLFELY 119 (191)
T ss_dssp EEEEEEE--ETTTTEEEEEEEECHHHHTTTCTTCEEEEC-EEEECC-SSCHHHHHHHHHHHHC-CCCSC---EEEEEEEE
T ss_pred EEEEEEE--ECCCCEEEEEEcCCccccccCCCCCeEEEe-cceEeC-CCCHHHHHHHHHHHHhCCccCc---EEEEEEEE
Confidence 3444333 333457777655431 111 6788975 699999 9999999999999999999854 55555432
Q ss_pred EEeeCCCeeeeEEEEEEEEEcCCCccc---CCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHHHHcCCCC
Q 016606 294 YTDINGFSYKRDVIFCYDLKLPEDFVP---MNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFLFRHGYIR 367 (386)
Q Consensus 294 y~~~~~~gi~~ev~~vYdl~l~~d~~p---~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl~RhG~i~ 367 (386)
..+ +...+.+++|.+.......+ ...++|+.++.|++++|+.+++.++ .++....++.+.++.+||++.
T Consensus 120 ---~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~g-~i~d~~t~~al~~~~~~~~~~ 191 (191)
T 3o6z_A 120 ---MSP-GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKTG-EIRDGKTVLLLNYLQTSHLMD 191 (191)
T ss_dssp ---SCT-TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHHS-SCCBHHHHHHHHHHHHHSTTC
T ss_pred ---eCC-CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHcC-CCCCHHHHHHHHHHHHhCCCC
Confidence 111 22335567777776432111 1126899999999999999999997 688778889999999999874
No 15
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.58 E-value=1.2e-14 Score=124.45 Aligned_cols=105 Identities=21% Similarity=0.279 Sum_probs=74.9
Q ss_pred EEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeee
Q 016606 224 GYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYK 303 (386)
Q Consensus 224 ~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~ 303 (386)
|.+.+|+ ++|+.||. .|.|.. |||+++.|||+.+||+||++|||||.+.. ...++.+.|.+.......
T Consensus 9 ~vv~~~~--~vLL~~r~------~g~W~~-PgG~ve~gEt~~~aa~RE~~EEtGl~~~~---~~~l~~~~~~~~~~~~~~ 76 (134)
T 3i7u_A 9 GVLFKDG--EVLLIKTP------SNVWSF-PKGNIEPGEKPEETAVREVWEETGVKGEI---LDYIGEIHYWYTLKGERI 76 (134)
T ss_dssp EEEEETT--EEEEEECT------TSCEEC-CEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEEEETTEEE
T ss_pred EEEEECC--EEEEEEeC------CCcEEC-CeeEecCCCCHHHHHHHHHHHhcCceEEE---eeeeeeeeEEecCCCceE
Confidence 3444454 78888874 278974 69999999999999999999999999865 456676666554332222
Q ss_pred eEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 304 RDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 304 ~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
...++.|.+....+ .+.++ +|+.+++|++++|+.+++
T Consensus 77 ~~~~~~f~~~~~~~-~~~~~-~E~~~~~W~~~~e~~~~l 113 (134)
T 3i7u_A 77 FKTVKYYLMKYKEG-EPRPS-WEVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp EEEEEEEEEEEEEE-CCCCC-TTSSEEEEEEHHHHHHHB
T ss_pred EEEEEEEEEEEcCC-cCcCC-hhheEEEEEEHHHHhhhc
Confidence 23345566665432 34443 689999999999999875
No 16
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.58 E-value=9.8e-15 Score=124.00 Aligned_cols=106 Identities=17% Similarity=0.190 Sum_probs=80.0
Q ss_pred EEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeE
Q 016606 226 VEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRD 305 (386)
Q Consensus 226 v~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~e 305 (386)
+..+.++++|++||+..+. ++|+|++ +||+++.||++.+||+||+.||+|+.+.... +..++.+.+.+.. ...
T Consensus 14 vi~~~~~~vLl~~r~~~~~-~~g~w~l-PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~~-~~~~~~~~~~~~~----~~~ 86 (144)
T 3r03_A 14 ALIDPDGRVLLAQRPPGKS-LAGLWEF-PGGKLEPGETPEAALVRELAEELGVDTRASC-LAPLAFASHSYDT----FHL 86 (144)
T ss_dssp EEBCTTSCEEEEECCTTSS-STTCEEC-SEEECCTTCCHHHHHHHHHHHHHCCBCCGGG-CEEEEEEEEECSS----SEE
T ss_pred EEEcCCCEEEEEEeCCCCC-CCCcEEC-CCcEecCCCCHHHHHHHHHHHHhCceeeccc-eEEEEeeeccCCC----eEE
Confidence 3335556899999987654 9999986 6999999999999999999999999987653 4455555555422 124
Q ss_pred EEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 306 VIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 306 v~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
.+++|.+....+ .++..|+.+++|++++|+.++
T Consensus 87 ~~~~~~~~~~~~---~~~~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 87 LMPLYACRSWRG---RATAREGQTLAWVRAERLREY 119 (144)
T ss_dssp EEEEEEECCCBS---CCCCCSSCEEEEECGGGGGGS
T ss_pred EEEEEEEEecCC---ccCCCCcceEEEEeHHHhccC
Confidence 567788876543 334578999999999998764
No 17
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.58 E-value=2e-14 Score=124.91 Aligned_cols=104 Identities=12% Similarity=0.108 Sum_probs=70.9
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEE--eeCCCeeeeEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYT--DINGFSYKRDV 306 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~--~~~~~gi~~ev 306 (386)
|++.++|+.+|+.. ||.|++ |||+++.|||+.+||+||+.||||+..... ..++.+.+. +..... ...
T Consensus 21 n~~~e~LL~~r~~~----~~~W~l-PgG~ve~gEt~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~~~~~~--~~~ 90 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWTP-PKGHVEPGEDDLETALRETQEEAGIEAGQL---TIIEGFKRELNYVARNK--PKT 90 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEEC-SEEECCSSCCHHHHHHHHHHHHHCCCGGGE---EEEEEEEEEEEEEETTE--EEE
T ss_pred CCCcEEEEEEecCC----CCCEEC-CeeeccCCCCHHHHHHHHHHHHHCCccccc---eeeeeEeeeeecCCCcc--eeE
Confidence 67789999998753 578975 699999999999999999999999998753 233333222 211111 122
Q ss_pred EEEEEEEcCC-CcccCCCCCceeeEEEEcHHHHHHHHH
Q 016606 307 IFCYDLKLPE-DFVPMNQDGEVESFQLMPVAHVANVIR 343 (386)
Q Consensus 307 ~~vYdl~l~~-d~~p~~~dgEV~~f~wv~~dEv~~~l~ 343 (386)
.+.|.+.... +..+. .++|+.+++|++++|+.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~-~~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 91 VIYWLAEVKDYDVEIR-LSHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp EEEEEEEESCTTCCCC-CCTTEEEEEEECHHHHHHHHC
T ss_pred EEEEEEEEeccCCccC-CCcceeEEEEeEHHHHHHHcC
Confidence 2333343332 22333 346999999999999998764
No 18
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.58 E-value=4.8e-15 Score=133.48 Aligned_cols=106 Identities=15% Similarity=0.151 Sum_probs=75.9
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
+++.++|+.+|+..+..++|+|+ ++||+++.||++++||+||++||+||.+.. +..++.+.+..... ...++
T Consensus 45 ~~~~~vLL~~r~~~~~~~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~~~~~~~----~~~~~ 116 (194)
T 1nqz_A 45 EADPRVLLTVRSSELPTHKGQIA-FPGGSLDAGETPTQAALREAQEEVALDPAA---VTLLGELDDVFTPV----GFHVT 116 (194)
T ss_dssp SSSCBBCEEEEC------CCCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCGGG---CEEEEECCCEEETT----TEEEE
T ss_pred CCCeEEEEEEecCCCCCCCCeEE-CCcccCCCCCCHHHHHHHHHHHHHCCCccc---eEEEEEccCccCCC----CeEEE
Confidence 44448999999988778999998 569999999999999999999999999875 44566554443322 23456
Q ss_pred EEEEEcCCCcc-cCCCCCceeeEEEEcHHHH-HHHH
Q 016606 309 CYDLKLPEDFV-PMNQDGEVESFQLMPVAHV-ANVI 342 (386)
Q Consensus 309 vYdl~l~~d~~-p~~~dgEV~~f~wv~~dEv-~~~l 342 (386)
+|.+.+..+.. ...+++|+.++.|++++|+ .+..
T Consensus 117 ~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 117 PVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEEEEecCCccccCCCccceeEEEEEEHHHhccCCC
Confidence 67777654333 4556789999999999999 6644
No 19
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.56 E-value=2.6e-14 Score=119.70 Aligned_cols=107 Identities=21% Similarity=0.270 Sum_probs=78.3
Q ss_pred EEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCe
Q 016606 222 LNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFS 301 (386)
Q Consensus 222 l~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~g 301 (386)
+.+++.+++ ++|+.||+. |+|. +|||+++.|||+.+||+||+.||+|+.+.. ...++.+.+.+.....
T Consensus 7 ~~~vi~~~~--~vLl~~r~~------~~w~-~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~---~~~~~~~~~~~~~~~~ 74 (134)
T 2pbt_A 7 AGGVLFKDG--EVLLIKTPS------NVWS-FPKGNIEPGEKPEETAVREVWEETGVKGEI---LDYIGEIHYWYTLKGE 74 (134)
T ss_dssp EEEEEEETT--EEEEEECTT------SCEE-CCEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEEEETTE
T ss_pred EEEEEEECC--EEEEEEeCC------CcEE-CCccccCCCCCHHHHHHHHHHHHHCCccEE---eeeeeEEEEEeeCCCc
Confidence 344554443 899999864 8996 569999999999999999999999999865 4566666665543322
Q ss_pred eeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 302 YKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 302 i~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
.....+++|.+....+ .+.+++ |+.+++|++++++.+++
T Consensus 75 ~~~~~~~~~~~~~~~~-~~~~~~-e~~~~~W~~~~el~~~~ 113 (134)
T 2pbt_A 75 RIFKTVKYYLMKYKEG-EPRPSW-EVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp EEEEEEEEEEEEEEEE-CCCCCT-TSSEEEEEEHHHHHHHC
T ss_pred EEEEEEEEEEEEecCC-CcCCCc-ceeEEEEEcHHHHHhhh
Confidence 2335567777766432 234444 99999999999999864
No 20
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.56 E-value=4.4e-14 Score=122.58 Aligned_cols=108 Identities=18% Similarity=0.207 Sum_probs=80.6
Q ss_pred EEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeee
Q 016606 224 GYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYK 303 (386)
Q Consensus 224 ~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~ 303 (386)
+++..+.++++|+.||...+ .|+|+|++ +||+++.||++.+||+||+.||+||.+.... +..++.+.+.+...
T Consensus 33 ~~~i~~~~~~vLL~~r~~~~-~~~g~w~~-PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~~~~~~~~~~~~~~---- 105 (158)
T 3hhj_A 33 ACALLDQDNRVLLTQRPEGK-SLAGLWEF-PGGKVEQGETPEASLIRELEEELGVHVQADN-LFPLTFASHGYETF---- 105 (158)
T ss_dssp EEEEBCTTSEEEEEECCCTT-SCCCCCBC-CEEECCTTCCHHHHHHHHHHHHHCCBCCGGG-CEEEEEEEEECSSC----
T ss_pred EEEEEeCCCEEEEEEeCCCC-CCCCEEEC-CceeecCCCCHHHHHHHHHHHHhCcEeecce-EEEEEEEeeccCCc----
Confidence 33334555689999998664 59999986 6999999999999999999999999987653 44555555554321
Q ss_pred eEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 304 RDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 304 ~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
...+++|.+....+ .++..|+.+++|++++|+.++
T Consensus 106 ~~~~~~~~~~~~~~---~~~~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 106 HLLMPLYFCSHYKG---VAQGREGQNLKWIFINDLDKY 140 (158)
T ss_dssp EEEEEEEEESCCBS---CCCCTTSCEEEEEEGGGGGGS
T ss_pred EEEEEEEEEEECCC---ccCCccccceEEEcHHHHhhC
Confidence 24567787776543 334578999999999998763
No 21
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.56 E-value=5.4e-14 Score=121.45 Aligned_cols=108 Identities=12% Similarity=0.186 Sum_probs=79.7
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCC---Ce-eee
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDING---FS-YKR 304 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~---~g-i~~ 304 (386)
+.++++|+.+|+.. .++|+|++ +||+++.||++.+||+||+.||+||.+... ...+++.+.+.+... .. ...
T Consensus 27 ~~~~~vLl~~r~~~--~~~g~w~~-PgG~ve~gE~~~~aa~REl~EEtGl~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 102 (160)
T 1rya_A 27 NSRGEFLLGKRTNR--PAQGYWFV-PGGRVQKDETLEAAFERLTMAELGLRLPIT-AGQFYGVWQHFYDDNFSGTDFTTH 102 (160)
T ss_dssp CTTSCEEEEEECSS--SSTTSEEC-CEEECCTTCCHHHHHHHHHHHHHSSCCCGG-GSEEEEEEEEEESSBTTBSSSCEE
T ss_pred cCCCEEEEEeccCC--CCCCEEEC-CccccCCCCCHHHHHHHHHHHHHCCCCCcc-cceEEEEEeEEEcccccCCCcCcE
Confidence 44568999999863 37999975 599999999999999999999999986432 256777776654321 10 113
Q ss_pred EEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 305 DVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 305 ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
.+.++|.+.++.+ .+..+++|+.+++|++++|+.++
T Consensus 103 ~~~~~f~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 103 YVVLGFRFRVSEE-ELLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp EEEEEEEEECCGG-GCCCCSSSEEEEEEECHHHHHHC
T ss_pred EEEEEEEEEcCcc-ccccCCCccceEEEecHHHHhhc
Confidence 4567787877543 34455679999999999999873
No 22
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.56 E-value=1.1e-14 Score=127.30 Aligned_cols=105 Identities=18% Similarity=0.228 Sum_probs=67.8
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEE----EEEeeCCCeee--eE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV----SYTDINGFSYK--RD 305 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~i----sy~~~~~~gi~--~e 305 (386)
+++|+.+|+..+..+||+|++ +||+++.||++++||+||+.|||||.+.... +..+... .+.+..+. .. ..
T Consensus 39 ~~vLL~~r~~~~~~~~g~w~l-PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~~~~~~~-~~~~~~ 115 (165)
T 3oga_A 39 GCYLLCKMADNRGVFPGQWAL-SGGGVEPGERIEEALRREIREELGEQLILSD-ITPWTFRDDIRIKTYADGR-QEEIYM 115 (165)
T ss_dssp TEEEEEEECC------CCEEC-CCEECCTTCCHHHHHHHHHHHHHCSSCCEEE-EEEEEEEEEEEEEEC--CC-EEEEEE
T ss_pred CEEEEEEecCCCCCCCCeEEC-CccccCCCCCHHHHHHHHHHHHhCCCccccc-eeeeeeecceeeEecCCCC-ceeEEE
Confidence 589999999888889999985 5999999999999999999999999986533 2221111 12222221 11 12
Q ss_pred EEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 306 VIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 306 v~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
++++|.+....+. +.. ++|+.+++|++++|+.++
T Consensus 116 ~~~~~~~~~~~~~-~~~-~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 116 IYLIFDCVSANRD-ICI-NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEEEEEESCCC-CCC-CTTEEEEEEECGGGGGGS
T ss_pred EEEEEEeeccCCC-ccC-CchheeeEEccHHHHhhC
Confidence 3456666654432 222 479999999999998763
No 23
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.56 E-value=6.2e-15 Score=131.26 Aligned_cols=112 Identities=14% Similarity=0.145 Sum_probs=80.8
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
+.++++|+.+|... ..++|+|++ +||+++.||++++||+||+.||||+.+.. +..++.+.. .. +.....++
T Consensus 50 ~~~~~vLL~~r~~~-~~~~~~w~~-PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~~---~~-~~~~~~~~ 120 (182)
T 2yvp_A 50 TERGTALLVRQYRH-PTGKFLLEV-PAGKVDEGETPEAAARRELREEVGAEAET---LIPLPSFHP---QP-SFTAVVFH 120 (182)
T ss_dssp CTTSEEEEEEEEEG-GGTEEEEEC-CEEECCTTCCHHHHHHHHHHHHHCEECSC---EEECCCBCS---CT-TTBCCEEE
T ss_pred cCCCEEEEEEeccC-CCCCcEEEe-ccccCCCCcCHHHHHHHHHHHHhCCCccc---EEEEEEEeC---CC-CccccEEE
Confidence 44458999888764 457899985 69999999999999999999999998764 444444321 11 11234566
Q ss_pred EEEEEcCC-CcccCCCCCceeeEEEEcHHHHHHHHHcCCCCCC
Q 016606 309 CYDLKLPE-DFVPMNQDGEVESFQLMPVAHVANVIRRTEFFKP 350 (386)
Q Consensus 309 vYdl~l~~-d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkp 350 (386)
+|.+.... ...+..+++|+.++.|++++|+.+++..+ .+..
T Consensus 121 ~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~-~~~~ 162 (182)
T 2yvp_A 121 PFLALKARVVTPPTLEEGELLESLELPLTEVYALLAKG-EIQD 162 (182)
T ss_dssp EEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHTT-CCCC
T ss_pred EEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHcC-CcCC
Confidence 77665321 12244567899999999999999999986 4653
No 24
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.56 E-value=1.7e-15 Score=141.00 Aligned_cols=140 Identities=13% Similarity=0.124 Sum_probs=90.9
Q ss_pred EEEeccccccCCccceeeeEEEEEEECCceEEEEEEeCCCCC--CCCCccccccccCCCCCCC--H----HHHHHHHHHh
Q 016606 203 FSLDRAAAPYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKS--TYPGMLDILAGGGLPHGIA--C----GENIIKECEE 274 (386)
Q Consensus 203 ~~ieRaa~~~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~--t~PG~wD~~vaGgV~aGEs--~----~eAa~REl~E 274 (386)
..++|+.+-.-+.....++.... .++ +++|+.+|...+. .++|+|++.|||+|++||| + ++||+||++|
T Consensus 53 ~~~~Rg~~e~d~~~~q~i~~~II-~~~--grvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~E 129 (211)
T 3e57_A 53 FFRERDEAEYDETTKQVIPYVVI-MDG--DRVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVNE 129 (211)
T ss_dssp EEEEHHHHTTCTTEEEEEEEEEE-EET--TEEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHHH
T ss_pred EEEEccccccCCcccceEEEEEE-EEC--CEEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHHH
Confidence 57889888777766555555433 233 4899999987763 3789999878999999999 5 9999999999
Q ss_pred hhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHH
Q 016606 275 EAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSL 354 (386)
Q Consensus 275 EaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~al 354 (386)
||||.+.. +.++|.+.+... +.+ ...+.++|.+.... ..+++.|+.+++|++++|+.++... +-+.+.+
T Consensus 130 EtGl~v~~---~~~ig~~~~~~~-~~~-~~~l~~~f~~~~~~---g~~~~~E~~~~~W~~~~eL~~~~~~---le~wS~l 198 (211)
T 3e57_A 130 EVDVSLRE---LEFLGLINSSTT-EVS-RVHLGALFLGRGKF---FSVKEKDLFEWELIKLEELEKFSGV---MEGWSKI 198 (211)
T ss_dssp HEEEEEEE---EEEEEEEECCSS-HHH-HTEEEEEEEEEEEE---EEESCTTTCEEEEEEHHHHHHHGGG---CCHHHHH
T ss_pred HhCCeeec---cEEEEEEeccCC-CCC-eEEEEEEEEEEeCC---ceeCCCCeEEEEEEEHHHHHHhHhh---ccchhHH
Confidence 99997654 667777765321 111 11233567776542 3345678889999999999987542 4445555
Q ss_pred HH
Q 016606 355 AI 356 (386)
Q Consensus 355 Vl 356 (386)
|+
T Consensus 199 vl 200 (211)
T 3e57_A 199 SA 200 (211)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 25
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.56 E-value=4.8e-14 Score=121.01 Aligned_cols=115 Identities=11% Similarity=0.107 Sum_probs=80.3
Q ss_pred eeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEE---
Q 016606 219 AVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYT--- 295 (386)
Q Consensus 219 gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~--- 295 (386)
+|.+.+|...++++++|+.+|+.. |.|. ++||+++.||++.+||+||++|||||.+.... ....+...+.
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~~-----g~w~-~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~~~~ 79 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTDA-----DVWQ-FVAGGGEDEEAISETAKRESIEELNLDVDVKM-YSLDSHASIPNFH 79 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESSS-----SCEE-CEEEECCTTCCHHHHHHHHHHHHHTCCSCCCE-EEEEEEEEEEGGG
T ss_pred EEEEEEEEecCCCeEEEEEEEcCC-----CCEe-CCccccCCCCCHHHHHHHHHHHHhCCCcccce-EEEEeeeccccee
Confidence 566666766677789999999753 8997 56999999999999999999999999987521 1111111111
Q ss_pred eeCCCeeeeEEEEEEEEEcCCC-cccCCCCCceeeEEEEcHHHHHHHH
Q 016606 296 DINGFSYKRDVIFCYDLKLPED-FVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 296 ~~~~~gi~~ev~~vYdl~l~~d-~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
+....+ .....++|.+.++.+ ..+.+ ++|+.+++|++++|+.+++
T Consensus 80 ~~~~~~-~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~~ 125 (149)
T 3son_A 80 FSFNKP-YVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQLL 125 (149)
T ss_dssp TCSSSC-SEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHHC
T ss_pred eccCCc-eEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHHh
Confidence 111111 124457788887632 23444 4799999999999999875
No 26
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.53 E-value=1e-13 Score=117.79 Aligned_cols=113 Identities=14% Similarity=0.149 Sum_probs=76.8
Q ss_pred EEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEE---EEEEe--
Q 016606 222 LNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA---VSYTD-- 296 (386)
Q Consensus 222 l~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~---isy~~-- 296 (386)
+.+++.+.+++++|+.+|+.. ||+|+. +||+++.||++.+||+||+.||+||.+...+ +..++. ..|..
T Consensus 12 v~~~i~~~~~~~vLl~~r~~~----~g~w~~-PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~~~~~~~~~~~~~~~~ 85 (150)
T 2o1c_A 12 ILVVIYAQDTKRVLMLQRRDD----PDFWQS-VTGSVEEGETAPQAAMREVKEEVTIDVVAEQ-LTLIDCQRTVEFEIFS 85 (150)
T ss_dssp EEEEEEETTTCEEEEEECSSS----TTCEES-EEEECCTTCCHHHHHHHHHHHHHCCCHHHHT-CCEEEEEEEEEEECCG
T ss_pred EEEEEEeCCCCEEEEEEecCC----CCceEC-CccccCCCCCHHHHHHHHHHHHhCCCccccc-eeEEeeeceeeeeeec
Confidence 334444433468999998764 799985 6999999999999999999999999987632 223332 22210
Q ss_pred ----eCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 297 ----INGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 297 ----~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
..+.+......++|.+.+..+..+ ...|+.+++|++++|+.++.
T Consensus 86 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~--~~~E~~~~~W~~~~el~~~~ 133 (150)
T 2o1c_A 86 HLRHRYAPGVTRNTESWFCLALPHERQI--VFTEHLAYKWLDAPAAAALT 133 (150)
T ss_dssp GGGGGBCTTCCEEEEEEEEEEESSCCCC--CCSSSSCEEEEEHHHHHHHC
T ss_pred ccccccCCCCcceEEEEEEEEcCCCCCc--ChhHhhccEeecHHHHHhhh
Confidence 011111235567787777654222 23789999999999999863
No 27
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.53 E-value=1.4e-14 Score=129.97 Aligned_cols=116 Identities=14% Similarity=0.137 Sum_probs=77.9
Q ss_pred eeeEEEEEEECC----ceEEEEEEeCC-----CCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceee
Q 016606 219 AVPLNGYVEKDG----QKFLWIGKRSQ-----VKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPV 289 (386)
Q Consensus 219 gVHl~~yv~~dg----~~~llIqrRS~-----~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~v 289 (386)
+|.+.++..+++ +++||+.+|+. .+..++|.|.+ +||+++.||++.+||+||+.|||||.+.. +..+
T Consensus 29 ~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~l-PGG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l 104 (187)
T 3i9x_A 29 TSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWAV-PGGFVDENESAEQAAERELEEETSLTDIP---LIPF 104 (187)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEEC-SEEECCTTSCHHHHHHHHHHHHHCCCSCC---CEEE
T ss_pred eEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEEC-CceeCCCCCCHHHHHHHHHHHHHCCCCcc---eEEE
Confidence 344555544444 67999999976 45678999975 59999999999999999999999998765 4455
Q ss_pred EEEEEEeeCCCeeeeEEEEEEEEEcCCCc-ccCCCCCceeeEEEEcHHHHHH
Q 016606 290 GAVSYTDINGFSYKRDVIFCYDLKLPEDF-VPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 290 g~isy~~~~~~gi~~ev~~vYdl~l~~d~-~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
+.+.+......+. .+..+|.+.+..+. ......+|+.+++|++++|+.+
T Consensus 105 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 105 GVFDKPGRDPRGW--IISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp EEECCTTSSTTSS--EEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTT
T ss_pred EEEcCCccCCCCC--EEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHccc
Confidence 5543322222222 22233333333221 1122357899999999999975
No 28
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.53 E-value=1e-14 Score=126.59 Aligned_cols=103 Identities=17% Similarity=0.259 Sum_probs=67.9
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEE-----EEEeeCCCeee
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV-----SYTDINGFSYK 303 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~i-----sy~~~~~~gi~ 303 (386)
+.+++||+++|+ +|+|+ ++||+++.||++.+||+||+.|||||.+.. ...++.+ .+.+..+.. .
T Consensus 30 ~~~~~vLL~~r~------~~~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~~~~~~~-~ 98 (153)
T 3eds_A 30 NEQGEILFQYPG------GEYWS-LPAGAIELGETPEEAVVREVWEETGLKVQV---KKQKGVFGGKEYRYTYSNGDE-V 98 (153)
T ss_dssp CTTCCEEEECC---------CBB-CSEEECCTTSCHHHHHHHHHHHHHCEEEEE---EEEEEEECSGGGEEECTTSCE-E
T ss_pred cCCCeEEEEEcC------CCcEE-CCccccCCCCCHHHHHHHHHHHHHCcccee---eeEEEEecccceeeecCCCCe-E
Confidence 555789999887 78997 569999999999999999999999998865 3445544 333333322 2
Q ss_pred eEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHH
Q 016606 304 RDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIR 343 (386)
Q Consensus 304 ~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~ 343 (386)
..+.++|.+.+..+ .+.++++|+.+++|++++|+.++..
T Consensus 99 ~~~~~~f~~~~~~~-~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 99 EYIVVVFECEVTSG-ELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp EEEEEEEEEEEEEE-CCC-------CEEEECGGGCCCBSS
T ss_pred EEEEEEEEEEecCC-ccccCCCcEEEEEEECHHHCchhcc
Confidence 24566777766432 2445678999999999999987654
No 29
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.53 E-value=5.4e-14 Score=122.61 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=74.4
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYd 311 (386)
++||+.||+... ++|+|++ +||+++.||++.+||+||+.|||||.+.. ...++.+.+.+.... ...+.++|.
T Consensus 40 ~~vLL~~r~~~~--~~~~w~l-PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~--~~~~~~~f~ 111 (157)
T 4dyw_A 40 GRILLIKRKRAP--EAGCWGL-PGGKVDWLEPVERAVCREIEEELGIALER---ATLLCVVDHIDAANG--EHWVAPVYL 111 (157)
T ss_dssp TEEEEEEECSSS--STTCEEC-CEEECCTTCCHHHHHHHHHHHHHSCEEES---CEEEEEEEEEETTTT--EEEEEEEEE
T ss_pred CEEEEEEecCCC--CCCEEEC-CcccCCCCCCHHHHHHHHHHHHHCccccc---CcEEEEEEeeccCCC--cEEEEEEEE
Confidence 489999998643 8999975 69999999999999999999999999876 345666655543222 224456676
Q ss_pred EEcCCCcccCCCCCceeeEEEEcHHHHHH
Q 016606 312 LKLPEDFVPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 312 l~l~~d~~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
+.+..+.....+++|+.+++|++++|+.+
T Consensus 112 ~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 112 AHAFSGEPRVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp ESEEESCCCCSCTTTEEEEEEEETTSCCS
T ss_pred EEEcCCCcccCCCCcEeEEEEECHHHccc
Confidence 66543322223457999999999999865
No 30
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.52 E-value=5.8e-14 Score=120.85 Aligned_cols=99 Identities=18% Similarity=0.152 Sum_probs=63.4
Q ss_pred CCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEEE-cCCCcccCCCC
Q 016606 246 YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLK-LPEDFVPMNQD 324 (386)
Q Consensus 246 ~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl~-l~~d~~p~~~d 324 (386)
.+|+|+ +|||+++.|||+++||+||++||||+.+.. +..++.+ +... +...+.+++|.+. +..+ .+..++
T Consensus 30 ~~~~w~-~PgG~ve~gEt~~~aa~REl~EEtGl~~~~---~~~l~~~---~~~~-~~~~~~~~~f~~~~~~~~-~~~~~~ 100 (145)
T 2w4e_A 30 RATITE-IVAGGVEKGEDLGAAAARELLEEVGGAASE---WVPLPGF---YPQP-SISGVVFYPLLALGVTLG-AAQLED 100 (145)
T ss_dssp TEEEEE-CEEEECCTTCCHHHHHHHHHHHHHCEECSE---EEECCCB---BSCT-TTCCCEEEEEEEEEEEEC-------
T ss_pred CCCEEE-eCCccCCCCCCHHHHHHHHHHHhhCCccCe---EEEEecC---cCCC-CccCceEEEEEEEecccC-CCCCCC
Confidence 467897 569999999999999999999999998764 3444432 1111 1112344555544 2212 234567
Q ss_pred CceeeEEEEcHHHHHHHHHcCCCCCCCcHH
Q 016606 325 GEVESFQLMPVAHVANVIRRTEFFKPNCSL 354 (386)
Q Consensus 325 gEV~~f~wv~~dEv~~~l~~~~~fkpn~al 354 (386)
+|+.+++|++++|+.+++.++ .++....+
T Consensus 101 ~E~~~~~w~~~~el~~~~~~~-~~~~~~~~ 129 (145)
T 2w4e_A 101 TETIERVVLPLAEVYRMLEAG-EIQDGPSS 129 (145)
T ss_dssp --CEEEEEEEHHHHHHHHHHT-CCCBHHHH
T ss_pred CCeEEEEEEeHHHHHHHHHcC-CcCcHHHH
Confidence 899999999999999999986 56544333
No 31
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.51 E-value=8.9e-14 Score=127.90 Aligned_cols=124 Identities=13% Similarity=0.106 Sum_probs=82.6
Q ss_pred CceEEEE--EEeCCCCCC--CCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeE
Q 016606 230 GQKFLWI--GKRSQVKST--YPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRD 305 (386)
Q Consensus 230 g~~~llI--qrRS~~K~t--~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~e 305 (386)
+++++++ |.|...+.. .++.|++ |||+++.||++++||+||+.||||+.+.. +.+++.+ | ..+ +...+
T Consensus 68 ~~~~vLLvrq~R~~~~~~~~~~~~wel-PgG~ve~gE~~~~aA~REl~EEtGl~~~~---~~~l~~~-~--~~~-g~~~~ 139 (209)
T 1g0s_A 68 VRDEVVLIEQIRIAAYDTSETPWLLEM-VAGMIEEGESVEDVARREAIEEAGLIVKR---TKPVLSF-L--ASP-GGTSE 139 (209)
T ss_dssp TTTEEEEEEEECGGGGGGSSCSEEEEC-EEEECCTTCCHHHHHHHHHHHHHCCCCCC---EEEEEEE-E--SCT-TTBCC
T ss_pred CCCEEEEEEeecccCCCCCCCCeEEEe-CcccCCCCcCHHHHHHHHHHHHcCcccCc---EEEeEEE-e--cCC-CccCc
Confidence 3446666 456554322 2577875 69999999999999999999999998864 5566543 2 222 22335
Q ss_pred EEEEEEEEcCCC-c---ccCCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHHHH
Q 016606 306 VIFCYDLKLPED-F---VPMNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFLFR 362 (386)
Q Consensus 306 v~~vYdl~l~~d-~---~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl~R 362 (386)
.+++|.+..... . ....+++|+.++.|++++|+.+++.++ .++....++.+.++..
T Consensus 140 ~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~g-~i~d~~t~~al~~~~~ 199 (209)
T 1g0s_A 140 RSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEEG-KIDNAASVIALQWLQL 199 (209)
T ss_dssp EEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHTT-SSCBHHHHHHHHHHHH
T ss_pred EEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHcC-CCCCHHHHHHHHHHHH
Confidence 667777765321 1 123467889999999999999999986 5765556666666544
No 32
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.51 E-value=4.6e-14 Score=119.07 Aligned_cols=98 Identities=13% Similarity=0.152 Sum_probs=73.8
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYd 311 (386)
+++|+.+|+..+ .++|+|+. +||+++.||++.+||+||+.||+|+.... ...++.+.+.+.. . ...+++|.
T Consensus 20 ~~vLl~~r~~~~-~~~g~w~l-PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~---~~~~~~~~~~~~~---~-~~~~~~~~ 90 (140)
T 2rrk_A 20 GKILLAQRPAQS-DQAGLWEF-AGGKVEPDESQRQALVRELREELGIEATV---GEYVASHQREVSG---R-IIHLHAWH 90 (140)
T ss_dssp TEEEEEECCSSC-SCCCCEEC-CEEECCTTSCHHHHHHHHHHHHSCEEEEC---CEEEEEEEEEETT---E-EEEEEEEE
T ss_pred CEEEEEEcCCCC-CCCCEEEC-CceecCCCCCHHHHHHHHHHHHHCCeeec---ccEEEEEEEecCC---c-EEEEEEEE
Confidence 489999997764 58999985 69999999999999999999999998865 4556666655432 1 23456676
Q ss_pred EEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 312 LKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 312 l~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
+....+ .++.+|+.++.|++++++.++
T Consensus 91 ~~~~~~---~~~~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 91 VPDFHG---TLQAHEHQALVWCSPEEALQY 117 (140)
T ss_dssp ESEEEE---CCCCSSCSCEEEECHHHHTTS
T ss_pred EEeeCC---CcCCCccceeEEeCHHHHhhC
Confidence 654332 234568899999999998764
No 33
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.51 E-value=1.2e-13 Score=114.66 Aligned_cols=98 Identities=13% Similarity=0.163 Sum_probs=71.8
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
+.++++|+.||+. |+|+. +||+++.||++.+||+||+.||+|+.+.. ...++.+.|... +. . ..++
T Consensus 11 ~~~~~vLl~~r~~------g~w~~-PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~---~~~~~~~~~~~~-~~--~-~~~~ 76 (126)
T 1vcd_A 11 NAKREVLLLRDRM------GFWVF-PKGHPEPGESLEEAAVREVWEETGVRAEV---LLPLYPTRYVNP-KG--V-EREV 76 (126)
T ss_dssp CTTSCEEEEECTT------SCEEC-CEECCCTTCCHHHHHHHHHHHHHCCEEEE---EEEEEEEEEECT-TS--C-EEEE
T ss_pred cCCCEEEEEEECC------CCccC-CcCcCCCCCCHHHHHHHHHHHhhCcEeee---ccEEeEEEEecC-Cc--e-EEEE
Confidence 3345899999864 78975 69999999999999999999999998865 456676766652 21 2 2344
Q ss_pred EEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 309 CYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 309 vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
+|.+....+. + .+++|+.+++|++++++.+++
T Consensus 77 ~~~~~~~~~~-~-~~~~e~~~~~w~~~~el~~~~ 108 (126)
T 1vcd_A 77 HWFLMRGEGA-P-RLEEGMTGAGWFSPEEARALL 108 (126)
T ss_dssp EEEEEEEESC-C-CCCTTCCEEEEECHHHHHHHB
T ss_pred EEEEEEcCCC-C-CCCcceeeeEEcCHHHHHHhh
Confidence 5555443221 2 345789999999999998864
No 34
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.51 E-value=6.2e-14 Score=122.73 Aligned_cols=102 Identities=15% Similarity=0.221 Sum_probs=76.4
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
++++++|+.||+ +..|+|.|. +|||+++.||++.+||+||+.||+||.+.. ...++.+.+...... ...+.+
T Consensus 20 ~~~~~vLL~~r~--~~~~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~--~~~~~~ 91 (161)
T 3exq_A 20 PETQRVLVEDKV--NVPWKAGHS-FPGGHVEVGEPCATAAIREVFEETGLRLSG---VTFCGTCEWFDDDRQ--HRKLGL 91 (161)
T ss_dssp TTTCCEEEECCC--CCTTTCSBB-CCCCBCCTTSCHHHHHHHHHHHHHCCEESC---CEEEEEEEEECSSCS--SEEEEE
T ss_pred CCCCEEEEEEcc--CCCCCCCEE-ccceecCCCCCHHHHHHHHHHHhhCcEecC---CcEEEEEecccCCCC--eEEEEE
Confidence 333689999987 456889995 679999999999999999999999998875 456676666653222 134567
Q ss_pred EEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 309 CYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 309 vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
+|.+....+ .++..|+.+++|++++++.++
T Consensus 92 ~~~~~~~~~---~~~~~e~~~~~W~~~~el~~~ 121 (161)
T 3exq_A 92 LYRASNFTG---TLKASAEGQLSWLPITALTRE 121 (161)
T ss_dssp EEEECCEES---CCCGGGTTTEEEECGGGCCTT
T ss_pred EEEEeccCC---ccCCCccceEEEeeHHHhhhC
Confidence 787765433 233567889999999998654
No 35
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.50 E-value=2.9e-14 Score=130.09 Aligned_cols=114 Identities=17% Similarity=0.082 Sum_probs=79.8
Q ss_pred EEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEE
Q 016606 233 FLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDL 312 (386)
Q Consensus 233 ~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl 312 (386)
++|+.+|... ...+|+|++ |||+++.||++++||+||+.||||+.+.. +..++.+.+. . +...+.+++|.+
T Consensus 61 ~vLLvrq~r~-~~~~~~wel-PgG~ve~gEs~~~aA~REl~EEtGl~~~~---~~~l~~~~~~--~--~~~~~~~~~f~a 131 (198)
T 1vhz_A 61 HLILIREYAV-GTESYELGF-SKGLIDPGESVYEAANRELKEEVGFGAND---LTFLKKLSMA--P--SYFSSKMNIVVA 131 (198)
T ss_dssp EEEEEEEEET-TTTEEEEEC-EEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEECC--T--TTCCCEEEEEEE
T ss_pred EEEEEEcccC-CCCCcEEEe-CcccCCCCcCHHHHHHHHHHHHHCCCcCc---eEEEEEEeCC--C--CccCcEEEEEEE
Confidence 7777766543 346889985 69999999999999999999999998864 4455544322 1 122244566666
Q ss_pred EcCCCcccCCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHH
Q 016606 313 KLPEDFVPMNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAI 356 (386)
Q Consensus 313 ~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVl 356 (386)
....+.....+++|+.++.|++++|+.+++.++ .++....++.
T Consensus 132 ~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~~-~i~~~~~~~a 174 (198)
T 1vhz_A 132 QDLYPESLEGDEPEPLPQVRWPLAHMMDLLEDP-DFNEARNVSA 174 (198)
T ss_dssp EEEEECCCCCCCSSCCCEEEEEGGGGGGGGGCT-TTCBHHHHHH
T ss_pred EeCCcccCCCCCCceEEEEEEEHHHHHHHHHcC-CCCCHHHHHH
Confidence 542221234567899999999999999999986 5764444333
No 36
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.50 E-value=9.9e-14 Score=119.65 Aligned_cols=106 Identities=16% Similarity=0.219 Sum_probs=74.2
Q ss_pred EEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCee
Q 016606 223 NGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSY 302 (386)
Q Consensus 223 ~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi 302 (386)
.+++.++ +++|+.+| +|+|.. +||+++.||++.+||+||+.||||+.... ...++.+.+.+......
T Consensus 23 ~~ii~~~--~~vLl~~r-------~~~w~l-PgG~ve~gE~~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~~~ 89 (154)
T 2pqv_A 23 TALIVQN--HKLLVTKD-------KGKYYT-IGGAIQVNESTEDAVVREVKEELGVKAQA---GQLAFVVENRFEVDGVS 89 (154)
T ss_dssp EECCEET--TEEEEEEE-------TTEEEC-EEEECBTTCCHHHHHHHHHHHHHCCCEEE---EEEEEEEEEEEEETTEE
T ss_pred EEEEEEC--CEEEEEec-------CCeEEC-cccCcCCCCCHHHHHHHHHHHHhCCeeee---ceEEEEEeeeecCCCCc
Confidence 3344444 48999998 689975 79999999999999999999999999875 33445554443322211
Q ss_pred eeEEEEEEEEEcCCCcccC-CCCCceeeEEEEcHHHHHHH
Q 016606 303 KRDVIFCYDLKLPEDFVPM-NQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 303 ~~ev~~vYdl~l~~d~~p~-~~dgEV~~f~wv~~dEv~~~ 341 (386)
...+.++|.+.+..+.... ..++|+.+++|++++|+.++
T Consensus 90 ~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 90 YHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGS
T ss_pred ceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhc
Confidence 2245567878775432211 23578999999999999764
No 37
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.50 E-value=6e-14 Score=119.85 Aligned_cols=108 Identities=15% Similarity=0.225 Sum_probs=78.3
Q ss_pred eEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCC
Q 016606 221 PLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGF 300 (386)
Q Consensus 221 Hl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~ 300 (386)
.+.+.+..+ ++++|+.+|... ..++|+|++ +||+++.||++.+||+||+.||+|+.+... ..++.+.+.+.. .
T Consensus 23 ~~~~~i~~~-~~~vLl~~r~~~-~~~~g~w~~-PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~---~~~~~~~~~~~~-~ 95 (153)
T 3ees_A 23 PVVAGFLRK-DGKILVGQRPEN-NSLAGQWEF-PGGKIENGETPEEALARELNEELGIEAEVG---ELKLACTHSYGD-V 95 (153)
T ss_dssp EEEEEEEEE-TTEEEEEECCTT-STTTTCEEC-SEEECCTTCCHHHHHHHHHHHHHSCEEECC---CEEEEEEEEETT-E
T ss_pred EEEEEEEEE-CCEEEEEEeCCC-CCCCCeEEC-CceeeCCCCCHHHHHHHHHHHHHCCccccC---ceEEEEEEecCC-C
Confidence 333344332 258999999876 468999985 699999999999999999999999988764 345555555432 1
Q ss_pred eeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 301 SYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 301 gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
...+++|.+....+ .++..|+.++.|++++++.++
T Consensus 96 ---~~~~~~~~~~~~~~---~~~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 96 ---GILILFYEILYWKG---EPRAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp ---EEEEEEEEECEEES---CCCCSSSSEEEEECGGGGGGS
T ss_pred ---eEEEEEEEEEECCC---CcCCCccceEEEecHHHhhhC
Confidence 13356777766433 234678999999999998763
No 38
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.48 E-value=7.2e-15 Score=122.11 Aligned_cols=101 Identities=15% Similarity=0.188 Sum_probs=73.5
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
+.++++|+.||+..+ .++|+|+. +||+++.||++.+||+||+.||+|+.....+ .++.+.+.+.. . ...++
T Consensus 13 ~~~~~vLl~~r~~~~-~~~g~w~~-PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~~---~~~~~~~~~~~-~---~~~~~ 83 (129)
T 1mut_A 13 NENNEIFITRRAADA-HMANKLEF-PGGKIEMGETPEQAVVRELQEEVGITPQHFS---LFEKLEYEFPD-R---HITLW 83 (129)
T ss_dssp ETTTEEEEEECSSCC-SSSCCEEC-CCCCSSSCSSTTHHHHHHHHTTTCCSSCEEC---CCCCCBCCCSS-C---EEECC
T ss_pred ecCCEEEEEEeCCCC-CCCCeEEC-CccCcCCCCCHHHHHHHHHHHHhCCccccce---EEEEEEEecCC-c---eEEEE
Confidence 334589999998765 68999985 7999999999999999999999999976532 34444333221 1 13345
Q ss_pred EEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 309 CYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 309 vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
+|.+....+ .++++|+.++.|++++|+.++
T Consensus 84 ~~~~~~~~~---~~~~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 84 FWLVERWEG---EPWGKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp CEEEEECSS---CCCCCSSCCCEEEESSSCCTT
T ss_pred EEEEEccCC---ccCCcccceeEEeCHHHcccc
Confidence 676766543 234568899999999998763
No 39
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.48 E-value=6.7e-14 Score=128.16 Aligned_cols=129 Identities=14% Similarity=0.132 Sum_probs=81.0
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCC-CCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLP-HGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVI 307 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~-aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~ 307 (386)
+.++++|+.+|.... .++|+|++ +||+++ .||++++||+||+.|||||.+.. +..++.+ |.. . +...+.+
T Consensus 52 ~~~~~vLLvrr~r~~-~~~~~w~l-PgG~ve~~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~-~~~--~-~~~~~~~ 122 (207)
T 1mk1_A 52 DDNGNIPMVYQYRHT-YGRRLWEL-PAGLLDVAGEPPHLTAARELREEVGLQAST---WQVLVDL-DTA--P-GFSDESV 122 (207)
T ss_dssp CTTSEEEEEEEEETT-TTEEEEEC-CEEECCSTTCCHHHHHHHHHHHHHCEEEEE---EEEEEEE-CSC--T-TTBCCCE
T ss_pred cCCCEEEEEEeecCC-CCCcEEEe-CCccccCCCCCHHHHHHHHHHHHHCCcccc---cEEEEEE-EcC--C-CccccEE
Confidence 455688888776543 57899975 699999 99999999999999999998765 3445443 222 1 1222345
Q ss_pred EEEEEEcCCCc-cc-CCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHH--HHcCCCC
Q 016606 308 FCYDLKLPEDF-VP-MNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFL--FRHGYIR 367 (386)
Q Consensus 308 ~vYdl~l~~d~-~p-~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl--~RhG~i~ 367 (386)
++|.+....+. .+ ..+++|+.++.|++++|+.+++..+ .++....++.+-++ .+.|...
T Consensus 123 ~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~~-~i~~~~~~~al~~~~~~~~~~~~ 185 (207)
T 1mk1_A 123 RVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLRG-EIVNSIAIAGVLAVHAVTTGFAQ 185 (207)
T ss_dssp EEEEEEEEEECCC----------CEEEEEHHHHHHHHHTT-SCCCHHHHHHHHHHHHHHTTSCC
T ss_pred EEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHcC-CcCCHHHHHHHHHHHHHhccccC
Confidence 55655542211 11 1456899999999999999999986 56554444444433 3456544
No 40
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.47 E-value=2e-13 Score=116.12 Aligned_cols=107 Identities=17% Similarity=0.169 Sum_probs=74.2
Q ss_pred EEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEE-EEeeC-CCee
Q 016606 225 YVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS-YTDIN-GFSY 302 (386)
Q Consensus 225 yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~is-y~~~~-~~gi 302 (386)
++..++++++|+.||. +|+|+ ++||+++.||++.+||+||+.||+|+.+.. ...++.+. +.+.. ....
T Consensus 24 vi~~~~~~~vLl~~r~------~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~~~~~~ 93 (148)
T 2azw_A 24 IVSKPENNTMVLVQAP------NGAYF-LPGGEIEGTETKEEAIHREVLEELGISVEI---GCYLGEADEYFYSNHRQTA 93 (148)
T ss_dssp ECEEGGGTEEEEEECT------TSCEE-CSEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEEEETTTTEE
T ss_pred EEECCCCCeEEEEEcC------CCCEe-CCCcccCCCCCHHHHHHHHHHHHhCCeeEe---eeEEEEEEEEEcCCCCCcc
Confidence 3334435689999983 38997 569999999999999999999999998865 34455543 22322 2222
Q ss_pred eeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHH
Q 016606 303 KRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIR 343 (386)
Q Consensus 303 ~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~ 343 (386)
.....++|.+....+. +. ..+|+.++.|++++|+.+++.
T Consensus 94 ~~~~~~~~~~~~~~~~-~~-~~~e~~~~~W~~~~el~~~~~ 132 (148)
T 2azw_A 94 YYNPGYFYVANTWRQL-SE-PLERTNTLHWVAPEEAVRLLK 132 (148)
T ss_dssp EEEEEEEEEEEEEEEC-SS-CC-CCSEEEEECHHHHHHHBS
T ss_pred eEEEEEEEEEEcCcCC-cC-CCCceeeEEEeeHHHHHhhhc
Confidence 3355677877764332 22 346889999999999998753
No 41
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.47 E-value=8.1e-14 Score=120.46 Aligned_cols=111 Identities=17% Similarity=0.124 Sum_probs=76.1
Q ss_pred eEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCC
Q 016606 221 PLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGF 300 (386)
Q Consensus 221 Hl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~ 300 (386)
++.+.+..+.++++|+.+|+.. .++|.|+. +||+++.||++.+||+||++|||||.+.. ...++.+. . ..
T Consensus 21 ~~v~~~i~~~~~~vLl~~r~~~--~~~~~w~~-PgG~ve~gE~~~~aa~REl~EEtGl~~~~---~~~~~~~~--~--~~ 90 (156)
T 3gg6_A 21 YVVLAVFLSEQDEVLLIQEAKR--ECRGSWYL-PAGRMEPGETIVEALQREVKEEAGLHCEP---ETLLSVEE--R--GP 90 (156)
T ss_dssp EEEEEECBCTTSEEEEEECCCT--TSTTCEEC-SEEECCTTCCHHHHHHHHHHHHHCEEEEE---EEEEEEEE--S--ST
T ss_pred EEEEEEEEeCCCEEEEEEecCC--CCCCEEEC-CeeeccCCCCHHHHHHHHHHHhhCceeEe---eeEEEEEc--C--CC
Confidence 3333333455679999999743 48999985 69999999999999999999999998765 33444332 1 11
Q ss_pred eeeeEEEEEEEEEcCC-Cccc-CCCCCceeeEEEEcHHHHHHHHHc
Q 016606 301 SYKRDVIFCYDLKLPE-DFVP-MNQDGEVESFQLMPVAHVANVIRR 344 (386)
Q Consensus 301 gi~~ev~~vYdl~l~~-d~~p-~~~dgEV~~f~wv~~dEv~~~l~~ 344 (386)
. .+.++|.+.... ...+ ..+++|+.+++|++++|+.+++..
T Consensus 91 ~---~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (156)
T 3gg6_A 91 S---WVRFVFLARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRA 133 (156)
T ss_dssp T---EEEEEEEEEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSC
T ss_pred C---EEEEEEEEEeeCCeeccCCCCCcceeeeEEEcHHHCcccccc
Confidence 1 233455555432 1111 235689999999999999875543
No 42
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.47 E-value=3.6e-13 Score=122.28 Aligned_cols=115 Identities=17% Similarity=0.192 Sum_probs=74.5
Q ss_pred eEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCC
Q 016606 221 PLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGF 300 (386)
Q Consensus 221 Hl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~ 300 (386)
-+.+.+..+.++++|+.||.. .++|.|.+ +||+++.||++.+||+||++|||||.+... ..++. ...+..+.
T Consensus 28 ~v~~~v~~~~~~~vLL~~r~~---~~~g~w~l-PGG~ve~gEs~~~aA~REl~EEtGl~~~~~---~l~~~-~~~~~~~~ 99 (199)
T 3h95_A 28 GVAGAVFDESTRKILVVQDRN---KLKNMWKF-PGGLSEPEEDIGDTAVREVFEETGIKSEFR---SVLSI-RQQHTNPG 99 (199)
T ss_dssp EEEEEEEETTTTEEEEEEESS---SSTTSBBC-CEEECCTTCCHHHHHHHHHHHHHCCCEEEE---EEEEE-EECC----
T ss_pred eEEEEEEeCCCCEEEEEEEcC---CCCCCEEC-CccccCCCCCHHHHHHHHHHHHhCCccccc---eEEEE-EeeecCCC
Confidence 344455555556888888854 36899975 599999999999999999999999997642 23331 11111111
Q ss_pred ee-eeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHc
Q 016606 301 SY-KRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRR 344 (386)
Q Consensus 301 gi-~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~ 344 (386)
.. ...+++++.+.. .+..+.++++|+.+++|++++++.++...
T Consensus 100 ~~~~~~~~~~~~~~~-~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 143 (199)
T 3h95_A 100 AFGKSDMYIICRLKP-YSFTINFCQEECLRCEWMDLNDLAKTENT 143 (199)
T ss_dssp -----CEEEEEEEEE-SCCCCCCCTTTEEEEEEEEHHHHHHCSSB
T ss_pred CceeEEEEEEEEEcC-CCcccCCCccceeeeEEEeHHHHhhhhhc
Confidence 11 112233333332 22335566889999999999999987543
No 43
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.47 E-value=4.9e-13 Score=121.04 Aligned_cols=112 Identities=15% Similarity=0.155 Sum_probs=68.7
Q ss_pred EEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCC-ccccCCceeeEEEEEEeeCCC---
Q 016606 225 YVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIP-RSISNRARPVGAVSYTDINGF--- 300 (386)
Q Consensus 225 yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~-~~~~~~l~~vg~isy~~~~~~--- 300 (386)
++..++++++|+.+|. .+|.|.+ +||+++.|||+.+||+||+.|||||. ....... ...+.+....+.
T Consensus 51 vv~~~~~~~vLL~~r~-----~~g~w~l-PgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~~--~~~~~~~~~~~~~~~ 122 (197)
T 3fcm_A 51 FAVNKERNKFLMIHHN-----IYNSWAW-TGGHSDNEKDQLKVAIKELKEETGVKNPTPLLDK--AFALDVLTVNGHIKR 122 (197)
T ss_dssp EEECTTSCEEEEEEET-----TTTEEEC-EEEECTTCCBHHHHHHHHHHHHHCCSSCEESCSS--CSEEEEEEECCEEET
T ss_pred EEEECCCCEEEEEEec-----CCCCEEC-CccccCCCCCHHHHHHHHHHHHHCCCcccccCCC--ceEEEEeeecCcccc
Confidence 3333444589998886 4689975 59999999999999999999999998 4432111 111222211110
Q ss_pred ee----eeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHc
Q 016606 301 SY----KRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRR 344 (386)
Q Consensus 301 gi----~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~ 344 (386)
+. ...+.++|.+..+.+..+.++++|+.+++|++++|+.+++..
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 170 (197)
T 3fcm_A 123 GKYVSSHLHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSE 170 (197)
T ss_dssp TEEECCEEEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCC
T ss_pred CcccCCceeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCC
Confidence 00 011224455555544334556789999999999999998753
No 44
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.46 E-value=1.2e-13 Score=119.05 Aligned_cols=96 Identities=20% Similarity=0.314 Sum_probs=68.0
Q ss_pred EEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEE
Q 016606 233 FLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDL 312 (386)
Q Consensus 233 ~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl 312 (386)
.+|+++|+..+ ||| |. +|||+++.||++.+||+||+.||+|+.+.. ...++.+.+....+. ....++|.+
T Consensus 24 ~vLl~~r~~~~--~~g-w~-lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~~---~~~~~~~~~ 93 (155)
T 2b06_A 24 VMQYRAPENNR--WSG-YA-FPGGHVENDEAFAESVIREIYEETGLTIQN---PQLVGIKNWPLDTGG---RYIVICYKA 93 (155)
T ss_dssp EEEEEC-------CCE-EE-CCCCBCCTTSCHHHHHHHHHHHHHSEEEES---CEEEEEEEEECTTSC---EEEEEEEEE
T ss_pred EEEEEECCCCC--CCC-Ee-ccceecCCCCCHHHHHHHHHHHHhCccccC---CcEEEEEeeccCCCc---eEEEEEEEE
Confidence 39999998764 888 96 579999999999999999999999999875 445566655542221 245677776
Q ss_pred EcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 313 KLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 313 ~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
....+ .++..|+.+++|++++|+.++
T Consensus 94 ~~~~~---~~~~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 94 TEFSG---TLQSSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp CEEEE---CCCCBTTBEEEEEEGGGGGGS
T ss_pred EecCC---CCCCCcceeeEEeeHHHhhhC
Confidence 55432 223468899999999998764
No 45
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.46 E-value=1e-13 Score=118.35 Aligned_cols=107 Identities=10% Similarity=0.127 Sum_probs=70.4
Q ss_pred EEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeee
Q 016606 225 YVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKR 304 (386)
Q Consensus 225 yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ 304 (386)
++.+++++++|+.||.. +|+|+. +||+++.|||+.+||+||+.||||+.+.... ..+.+......+
T Consensus 10 ~i~~~~~~~vLl~~r~~-----~g~w~~-PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~~---~~~~~~~~~~~~----- 75 (146)
T 2jvb_A 10 AIFNENLSKILLVQGTE-----SDSWSF-PRGKISKDENDIDCCIREVKEEIGFDLTDYI---DDNQFIERNIQG----- 75 (146)
T ss_dssp EEBCTTSSEEEEECCSS-----SSCCBC-CEECCCSSSCHHHHHHHHHHHHTSCCCSSSS---CSSCEEEEEETT-----
T ss_pred EEEeCCCCEEEEEEEcC-----CCcEEC-CcccCCCCCCHHHHHHHHHHHHHCCCchHhc---ccccccccccCC-----
Confidence 33334346899988753 589975 6999999999999999999999999886532 222222211121
Q ss_pred EEEEEEEEE-cCCCcccCC-CCCceeeEEEEcHHHHHHHHHcC
Q 016606 305 DVIFCYDLK-LPEDFVPMN-QDGEVESFQLMPVAHVANVIRRT 345 (386)
Q Consensus 305 ev~~vYdl~-l~~d~~p~~-~dgEV~~f~wv~~dEv~~~l~~~ 345 (386)
...++|.+. +.......+ .++|+.++.|++++++.+++...
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~~ 118 (146)
T 2jvb_A 76 KNYKIFLISGVSEVFNFKPQVRNEIDKIEWFDFKKISKTMYKS 118 (146)
T ss_dssp EEEEEEEECCCCSSSCCCCCCSSSCCCEEEEEHHHHHTGGGCS
T ss_pred ceEEEEEEEeccccccCCcCCcchhheeEEeEHHHHHhhhccc
Confidence 122333332 222112233 26799999999999999988764
No 46
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.46 E-value=1.8e-13 Score=127.62 Aligned_cols=113 Identities=13% Similarity=0.122 Sum_probs=75.5
Q ss_pred CCccccccccCCCC-CCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEEEcCCCc-----cc
Q 016606 247 PGMLDILAGGGLPH-GIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDF-----VP 320 (386)
Q Consensus 247 PG~wD~~vaGgV~a-GEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl~l~~d~-----~p 320 (386)
++.|++ +||+++. ||++++||+||+.||||+.+... .+..++.+... .+...+.+++|.+...... ..
T Consensus 94 ~~~wel-PgG~ve~~gEs~~eaA~REl~EEtGl~~~~~-~l~~l~~~~~~----~g~~~~~~~~f~a~~~~~~~~~~~~~ 167 (218)
T 3q91_A 94 GVTVEL-CAGLVDQPGLSLEEVACKEAWEECGYHLAPS-DLRRVATYWSG----VGLTGSRQTMFYTEVTDAQRSGPGGG 167 (218)
T ss_dssp CEEEEC-EEEECCSSSCCHHHHHHHHHHHHHCBCCCGG-GCEEEEEEEEC-------CCEEEEEEEEEECGGGBCC----
T ss_pred CeEEEC-CcceeCCCCCCHHHHHHHHHHHHhCCccccC-ceEEEEEEecC----CCccceEEEEEEEEECCcccccCCCC
Confidence 678875 6999999 99999999999999999998432 25666653221 1223456677777754211 23
Q ss_pred CCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHHHHcCC
Q 016606 321 MNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFLFRHGY 365 (386)
Q Consensus 321 ~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl~RhG~ 365 (386)
.++++|+.++.|++++|+.+++.+++.-++.+.++.+.|+..+..
T Consensus 168 ~~d~~E~~ev~wv~l~el~~~i~~g~i~~~~~~l~al~W~~~~~~ 212 (218)
T 3q91_A 168 LVEEGELIEVVHLPLEGAQAFADDPDIPKTLGVIFGVSWFLSQVA 212 (218)
T ss_dssp -----CCEEEEEEEGGGHHHHHHCTTSCBBHHHHHHHHHHHHHTG
T ss_pred CCCCCcEEEEEEEEHHHHHHHHHcCCCCccHHHHHHHHHHHhccc
Confidence 456789999999999999999999743223333457788877654
No 47
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.45 E-value=1.3e-13 Score=119.28 Aligned_cols=119 Identities=14% Similarity=0.176 Sum_probs=73.7
Q ss_pred CccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEE--
Q 016606 214 GIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA-- 291 (386)
Q Consensus 214 Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~-- 291 (386)
|..+.+|.+. +. +.++++|+.+|+. +||+|++ +||+++.|||+++||+||++|||||.+.. +.....
T Consensus 11 ~~~~~~v~~~--i~-~~~~~vLl~~r~~----~~g~w~~-PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~ 79 (165)
T 1f3y_A 11 EGYRRNVGIC--LM-NNDKKIFAASRLD----IPDAWQM-PQGGIDEGEDPRNAAIRELREETGVTSAE---VIAEVPYW 79 (165)
T ss_dssp SSCCCEEEEE--EE-CTTSCEEEEEETT----EEEEEEC-CEEECCTTCCHHHHHHHHHHHHHCCCSEE---EEEECSSC
T ss_pred cceeeeEEEE--EE-CCCCcEEEEecCC----CCCcEEC-CeeccCCCCCHHHHHHHHHHHhhCCChhh---hhcccccc
Confidence 4444445443 33 4446899999963 5799985 59999999999999999999999998642 111100
Q ss_pred EEEEeeC----------CCeeeeEEEEEEEEEcCCC-cccCC-----CCCceeeEEEEcHHHHHHHHH
Q 016606 292 VSYTDIN----------GFSYKRDVIFCYDLKLPED-FVPMN-----QDGEVESFQLMPVAHVANVIR 343 (386)
Q Consensus 292 isy~~~~----------~~gi~~ev~~vYdl~l~~d-~~p~~-----~dgEV~~f~wv~~dEv~~~l~ 343 (386)
+.|.+.. +..+.....++|.+.+... ..+.+ +++|+.+++|++++|+.+++.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 147 (165)
T 1f3y_A 80 LTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTV 147 (165)
T ss_dssp CBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBC
T ss_pred eeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhh
Confidence 1121110 0000011233444444332 12232 367999999999999999874
No 48
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.45 E-value=3.5e-13 Score=120.20 Aligned_cols=118 Identities=11% Similarity=0.135 Sum_probs=84.1
Q ss_pred ceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEE
Q 016606 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCY 310 (386)
Q Consensus 231 ~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vY 310 (386)
++++|+.+|.. ..++|+|. ++||+++.||++.+||+||+.||+||.+.. +..++.+.+.+..... ....++|
T Consensus 35 ~~~vLL~~r~~--~~~~g~W~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~~~~~~~~~--~~~~~~f 106 (176)
T 3q93_A 35 PQRVLLGMKKR--GFGAGRWN-GFGGKVQEGETIEDGARRELQEESGLTVDA---LHKVGQIVFEFVGEPE--LMDVHVF 106 (176)
T ss_dssp SSEEEEEEECS--STTTTSEE-CEEEECCTTSCHHHHHHHHHHHHHSCEESC---CEEEEEEEEEETTCSC--EEEEEEE
T ss_pred CCEEEEEEEcC--CCCCCeEE-CceecCCCCCCHHHHHHHHHHHHHCCccee---eEEEEEEEEEcCCCCc--EEEEEEE
Confidence 45899998854 34799996 569999999999999999999999999864 5677777776543221 2345777
Q ss_pred EEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHHHHcCC
Q 016606 311 DLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFLFRHGY 365 (386)
Q Consensus 311 dl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl~RhG~ 365 (386)
.+....+ .+...|..+++|++++|+.++ .+.|+ ...++..++....
T Consensus 107 ~~~~~~~---~~~~~e~~~~~W~~~~el~~~-----~~~~~-~~~~l~~~~~~~~ 152 (176)
T 3q93_A 107 CTDSIQG---TPVESDEMRPCWFQLDQIPFK-----DMWPD-DSYWFPLLLQKKK 152 (176)
T ss_dssp EESCEES---CCCCCSSEEEEEEETTCCCGG-----GBCTT-HHHHHHHHHTTCC
T ss_pred EEECCCC---CcCCCcceeeEEeeHHHcccc-----ccCcc-hHHHHHHHHcCCc
Confidence 7765332 223457778899999998754 24444 3556666666543
No 49
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.43 E-value=7.2e-13 Score=116.34 Aligned_cols=106 Identities=18% Similarity=0.256 Sum_probs=69.1
Q ss_pred EEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCe
Q 016606 222 LNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFS 301 (386)
Q Consensus 222 l~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~g 301 (386)
+.+++.++ +++|+.||... +|+|. ++||+++.||++.+||+||++||+||.+.. ...++.+.+......
T Consensus 26 v~~ii~~~--~~vLL~~r~~~----~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~- 94 (171)
T 3id9_A 26 VTGILIED--EKVLLVKQKVA----NRDWS-LPGGRVENGETLEEAMIREMREETGLEVKI---KKLLYVCDKPDASPS- 94 (171)
T ss_dssp EEEEEEET--TEEEEEECSST----TCCEE-CCEEECCTTCCHHHHHHHHHHHHHCCCEEE---EEEEEEEEETTSSSC-
T ss_pred EEEEEEEC--CEEEEEEEECC----CCeEE-CCCccCCCCCCHHHHHHHHHHHHHCCcccc---ceEEEEEcccCCCCc-
Confidence 34444444 48999998763 79996 569999999999999999999999999764 334444443322211
Q ss_pred eeeEEEEEEEEEcCCC-ccc---CCCCCceeeEEEEcHHHHHHH
Q 016606 302 YKRDVIFCYDLKLPED-FVP---MNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 302 i~~ev~~vYdl~l~~d-~~p---~~~dgEV~~f~wv~~dEv~~~ 341 (386)
...+.|.+....+ ..+ ..+++|+.+++|++++|+.++
T Consensus 95 ---~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 95 ---LLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY 135 (171)
T ss_dssp ---EEEEEEEEEEC-------------CCCCCEEEEETGGGGGG
T ss_pred ---EEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC
Confidence 2233444544322 111 125679999999999999875
No 50
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.42 E-value=7.2e-13 Score=112.32 Aligned_cols=98 Identities=19% Similarity=0.290 Sum_probs=68.8
Q ss_pred CCceE--EEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEE
Q 016606 229 DGQKF--LWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDV 306 (386)
Q Consensus 229 dg~~~--llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev 306 (386)
|.+++ +|+.+|+.. |+.|+ ++||+++.|||+.+||+||+.||+|+.+.. ...++.+.+....+ .. ..+
T Consensus 20 ~~~~~~~vLl~~r~~~----~~~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~-~~-~~~ 89 (139)
T 2yyh_A 20 DGENFKGIVLIERKYP----PVGLA-LPGGFVEVGERVEEAAAREMREETGLEVRL---HKLMGVYSDPERDP-RA-HVV 89 (139)
T ss_dssp ETTEEEEEEEEEECSS----SCSEE-CCEEECCTTCCHHHHHHHHHHHHHCCCCEE---EEEEEEECCTTSCT-TS-CEE
T ss_pred cCCCcEEEEEEEecCC----CCcEE-CccccCCCCCCHHHHHHHHHHHHHCCCccc---ceEEEEECCCCcCC-Cc-eEE
Confidence 34456 999999753 55696 569999999999999999999999998764 33444433221111 11 244
Q ss_pred EEEEEEEcCCCcccCCCCCceeeEEEEcHHHHH
Q 016606 307 IFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVA 339 (386)
Q Consensus 307 ~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~ 339 (386)
.++|.+..... +. .++|+.+++|++++|+.
T Consensus 90 ~~~f~~~~~~~--~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 90 SVVWIGDAQGE--PK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp EEEEEEEEESC--CC-CCTTEEEEEEECTTSCC
T ss_pred EEEEEEecCCc--cC-CCCCcceEEEEEHHHCC
Confidence 56677766332 33 35799999999999987
No 51
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.41 E-value=6.3e-13 Score=127.41 Aligned_cols=116 Identities=15% Similarity=0.163 Sum_probs=80.6
Q ss_pred eeeEEEEEEECC--ceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEe
Q 016606 219 AVPLNGYVEKDG--QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTD 296 (386)
Q Consensus 219 gVHl~~yv~~dg--~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~ 296 (386)
+|++.++..+++ +++||+.+|... .++|+|.. +||+++.||++++||+||+.|||||.+.... +..++++....
T Consensus 41 ~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~l-PGG~ve~gEs~~~AA~REl~EEtGl~v~~~~-l~~l~~~~~~~ 116 (273)
T 2fml_A 41 TVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWAL-PGGFVNRNESTEDSVLRETKEETGVVISQEN-IEQLHSFSRPD 116 (273)
T ss_dssp EEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEEC-CEEECCTTSCHHHHHHHHHHHHHCCCCCGGG-EEEEEEECCTT
T ss_pred EEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEEC-CccCCCCCcCHHHHHHHHHHHHHCCCCCcCc-EEEEEEEcCCC
Confidence 455655555555 679999999764 47899975 5999999999999999999999998765432 44444332221
Q ss_pred eCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 297 INGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 297 ~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
..+.+ +.+.++|.+.++.+. ...++|+.++.|++++++.+++
T Consensus 117 r~~~~--~~~~~~y~a~~~~~~--~~~~~E~~~~~W~~~~e~~~~~ 158 (273)
T 2fml_A 117 RDPRG--WVVTVSYLAFIGEEP--LIAGDDAKEVHWFNLERHGQHI 158 (273)
T ss_dssp SSTTS--SEEEEEEEEECCCCC--CCCCTTEEEEEEEEEEEETTEE
T ss_pred CCCCc--eEEEEEEEEEeCCCC--CCCCcceeeEEEEEhhHhhhhh
Confidence 11111 234566767666542 2345789999999999977665
No 52
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.41 E-value=1.6e-12 Score=113.04 Aligned_cols=106 Identities=14% Similarity=0.125 Sum_probs=72.0
Q ss_pred EEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCcee---------------
Q 016606 224 GYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARP--------------- 288 (386)
Q Consensus 224 ~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~--------------- 288 (386)
+++.++ +++|+.||+. +|.|. ++||+++.|||+.+||+||++|||||.+.....+..
T Consensus 11 ~vi~~~--~~vLL~~r~~-----~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (159)
T 3f6a_A 11 VFIVCK--DKVLLHLHKK-----AKKML-PLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEKLLI 82 (159)
T ss_dssp EEEEET--TEEEEEECSS-----SCCEE-CEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCEEEC
T ss_pred EEEEEC--CEEEEEEcCC-----CCeEE-CCccCccCCCCHHHHHHHHHHHHhCCCceeccccccccccccccccccccc
Confidence 344443 4899998863 68995 679999999999999999999999999876442210
Q ss_pred --eEEEEEEeeCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 289 --VGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 289 --vg~isy~~~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
.....+.+... ...+.++|.+....+ .+.++++|+.+++|++++|+.++
T Consensus 83 ~p~~~~~~~~~~~---~~~~~~~f~~~~~~~-~~~~~~~E~~~~~W~~~~el~~~ 133 (159)
T 3f6a_A 83 NPIHTILGDVSPN---HSHIDFVYYATTTSF-ETSPEIGESKILKWYSKEDLKNA 133 (159)
T ss_dssp CCSEEEEECSSSS---SCEEEEEEEEECSCS-CCCCCTTSCCCEEEECSSSSTTC
T ss_pred CccccccccCCCC---ceEEEEEEEEEeCCC-CcCCCCCcccceEEeeHHHHhhC
Confidence 00011111111 114456777777543 24446789999999999998764
No 53
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.39 E-value=6.1e-13 Score=121.18 Aligned_cols=103 Identities=17% Similarity=0.225 Sum_probs=70.1
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
+++++||+.+|.. +||+|+. |||+++.||++++||+||++|||||.+.. ...++.+.+. ... ...+
T Consensus 51 ~~~~~vLLv~r~~----~~g~W~l-PgG~ve~gEt~~eaa~REl~EEtGl~~~~---~~~l~~~~~~--~~~----~~~~ 116 (194)
T 2fvv_A 51 ESEEEVLLVSSSR----HPDRWIV-PGGGMEPEEEPSVAAVREVCEEAGVKGTL---GRLVGIFENQ--ERK----HRTY 116 (194)
T ss_dssp TTCCEEEEEECSS----CTTSEEC-SEEECCTTCCHHHHHHHHHHHHHCEEEEE---EEEEEEEEET--TTT----EEEE
T ss_pred CCCCEEEEEEEeC----CCCcEEC-CCCcCCCCcCHHHHHHHHHHHHhCCcccc---ceEEEEEEcC--CCc----eEEE
Confidence 5567999999864 4799975 69999999999999999999999998765 3455555432 111 2234
Q ss_pred EEEEEcCCCccc-CCCCCceeeEEEEcHHHHHHHHHcC
Q 016606 309 CYDLKLPEDFVP-MNQDGEVESFQLMPVAHVANVIRRT 345 (386)
Q Consensus 309 vYdl~l~~d~~p-~~~dgEV~~f~wv~~dEv~~~l~~~ 345 (386)
+|.+.++..... ..+..|..+++|++++|+.+++..+
T Consensus 117 ~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~~ 154 (194)
T 2fvv_A 117 VYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQYH 154 (194)
T ss_dssp EEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTTT
T ss_pred EEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhcC
Confidence 444443321111 1111245789999999999987653
No 54
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.37 E-value=1.4e-12 Score=112.79 Aligned_cols=99 Identities=14% Similarity=0.177 Sum_probs=72.0
Q ss_pred ceEEEEEEeCCCCCCCCCccccccccCCCCCCCHH-HHHHHHHHhhhC-CCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 231 QKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACG-ENIIKECEEEAG-IPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 231 ~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~-eAa~REl~EEaG-L~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
++++|+.||... ..++|+|++ +||+++.||++. +|++||+.||+| +.+.. ...++.+.+.+.. . ...++
T Consensus 33 ~~~vLl~~R~~~-~~~~g~w~~-PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~---~~~l~~~~~~~~~-~---~~~~~ 103 (155)
T 1x51_A 33 GAQILLVQRPNS-GLLAGLWEF-PSVTWEPSEQLQRKALLQELQRWAGPLPATH---LRHLGEVVHTFSH-I---KLTYQ 103 (155)
T ss_dssp SEEEEEEECCCC-STTCSCEEC-CEEECCSSHHHHHHHHHHHHHHHSCCCCSTT---CEECCCBCCBCSS-C---EEEEE
T ss_pred CCEEEEEECCCC-CCCCceecC-CccccCCCCCHHHHHHHHHHHHHhCCcceee---eeecceEEEecCC-c---cEEEE
Confidence 579999999764 568999985 699999999996 999999999999 77654 3344444443322 1 13356
Q ss_pred EEEEEcCCCcccCCCCCceeeEEEEcHHHHHHH
Q 016606 309 CYDLKLPEDFVPMNQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 309 vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~ 341 (386)
+|.+.+..+ .+ ...|..++.|++++|+.++
T Consensus 104 ~~~~~~~~~-~~--~~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 104 VYGLALEGQ-TP--VTTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp EEEEECSSC-CC--CCCCCTTEEEEEHHHHHHS
T ss_pred EEEEEEcCC-CC--CCCCCCccEEccHHHhhhc
Confidence 777776543 12 2357788999999999863
No 55
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.37 E-value=3.6e-12 Score=112.34 Aligned_cols=105 Identities=14% Similarity=0.138 Sum_probs=71.5
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEE----EEEeeCC-----
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV----SYTDING----- 299 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~i----sy~~~~~----- 299 (386)
+.++++|+.+|+. +|+|++ +||+++.|||+.+||+||+.|||||.... ...++.+ .|.....
T Consensus 17 ~~~~~vLl~~r~~-----~~~w~~-p~G~~e~gE~~~~aa~RE~~EE~G~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 87 (164)
T 2kdv_A 17 NRQGQVMWARRFG-----QHSWQF-PQGGINPGESAEQAMYRELFEEVGLSRKD---VRILASTRNWLRYKLPKRLVRWD 87 (164)
T ss_dssp CTTSEEEEEEETT-----CCCEEC-CEEECCTTCCHHHHHHHHHHHHHCCCGGG---EEEEEECSSCEEEECCTTTCCTT
T ss_pred ccCCEEEEEEEcC-----CCeEEC-CeeecCCCCCHHHHHHHHHHHHHCCCccc---eEEEEEecceeEEecCcceeeec
Confidence 4446899999874 689975 69999999999999999999999999875 3455543 2333221
Q ss_pred --CeeeeEEEEEEEEEcCCC---cccCC-CCCceeeEEEEcHHHHHHHH
Q 016606 300 --FSYKRDVIFCYDLKLPED---FVPMN-QDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 300 --~gi~~ev~~vYdl~l~~d---~~p~~-~dgEV~~f~wv~~dEv~~~l 342 (386)
........++|.+.+..+ +.+.+ .+.|+.+++|++++++.+.+
T Consensus 88 ~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l 136 (164)
T 2kdv_A 88 TKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQV 136 (164)
T ss_dssp SSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGS
T ss_pred cCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhh
Confidence 011123445666665432 22222 24699999999999876543
No 56
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.36 E-value=2.3e-12 Score=121.21 Aligned_cols=111 Identities=17% Similarity=0.248 Sum_probs=78.6
Q ss_pred eeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCC--CCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEee
Q 016606 220 VPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPH--GIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDI 297 (386)
Q Consensus 220 VHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~a--GEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~ 297 (386)
|-+.++..++++++||+.+|+. ..++|.|. ++||+++. |||+.+||+||+.|||||.... +..++++.....
T Consensus 25 v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~-lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~---~~~l~~~~~~~r 98 (240)
T 3gz5_A 25 VDAVLFTYHDQQLKVLLVQRSN--HPFLGLWG-LPGGFIDETCDESLEQTVLRKLAEKTAVVPPY---IEQLCTVGNNSR 98 (240)
T ss_dssp EEEEEEEEETTEEEEEEEECCS--SSSTTCEE-CSEEECCTTTCSBHHHHHHHHHHHHHSSCCSE---EEEEEEEEESSS
T ss_pred EEEEEEEEeCCCcEEEEEECcC--CCCCCCEE-CCccccCCCCCcCHHHHHHHHHHHHHCCCCCc---eeeEEEeCCCcc
Confidence 4444444457788999999984 45789997 56999999 9999999999999999998765 445555555433
Q ss_pred CCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHH
Q 016606 298 NGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVA 339 (386)
Q Consensus 298 ~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~ 339 (386)
.+.+. .+.++|.+.++.+. +.++++|+.++.|++++|+.
T Consensus 99 ~~~~~--~~~~~y~a~~~~~~-~~~~~~e~~~~~W~~~~el~ 137 (240)
T 3gz5_A 99 DARGW--SVTVCYTALMSYQA-CQIQIASVSDVKWWPLADVL 137 (240)
T ss_dssp STTSC--EEEEEEEEECCHHH-HHHHHTTCTTEEEEEHHHHT
T ss_pred CCCce--EEEEEEEEEecccc-cCCCCCcccceEEecHHHcc
Confidence 33322 34455656655321 22235689999999999985
No 57
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.35 E-value=3.2e-12 Score=117.31 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=75.0
Q ss_pred eeeEEEEEEEC-CceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEee
Q 016606 219 AVPLNGYVEKD-GQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDI 297 (386)
Q Consensus 219 gVHl~~yv~~d-g~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~ 297 (386)
+|.+.+++.++ ++.++++.++... ...++.|++ +||+++.||++++||+||++||||+.+... ..++.+ |.
T Consensus 63 av~v~~v~~~~~~~~~vlLv~q~R~-~~~~~~wel-PgG~ve~gEs~~~aA~REl~EEtGl~~~~~---~~l~~~-~~-- 134 (212)
T 2dsc_A 63 GVAVIPVLQRTLHYECIVLVKQFRP-PMGGYCIEF-PAGLIDDGETPEAAALRELEEETGYKGDIA---ECSPAV-CM-- 134 (212)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEEG-GGTEEEEEC-CEEECCTTCCHHHHHHHHHHHHHCCCCEEE---EECCCE-ES--
T ss_pred EEEEEEEEeCCCCCcEEEEEEeecC-CCCCcEEEC-CccccCCCCCHHHHHHHHHHHHhCCCccce---EEeccE-Ec--
Confidence 56666666542 2346666543221 234678975 699999999999999999999999987642 233322 21
Q ss_pred CCCeeeeEEEEEEEEE--cCCC----cccCCCCCceeeEEEEcHHHHHHHHH
Q 016606 298 NGFSYKRDVIFCYDLK--LPED----FVPMNQDGEVESFQLMPVAHVANVIR 343 (386)
Q Consensus 298 ~~~gi~~ev~~vYdl~--l~~d----~~p~~~dgEV~~f~wv~~dEv~~~l~ 343 (386)
.+ ++..+.+++|.+. .... ..+.++++|+.++.|++++|+.+++.
T Consensus 135 ~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 135 DP-GLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp CT-TTBCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred CC-CccCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 11 2223444455444 3211 02345678999999999999999997
No 58
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.35 E-value=7.4e-12 Score=120.21 Aligned_cols=95 Identities=12% Similarity=0.133 Sum_probs=72.0
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYd 311 (386)
+++|+.||+..+ +|+|+. +||+++.|||+++||+||++|||||.+.. +.+++...+.+. ...++.|.
T Consensus 151 ~~vLL~rr~~~~---~g~w~l-PgG~vE~GEt~eeAa~REv~EEtGl~v~~---~~~~~~~~~~~~------~~~~~~f~ 217 (269)
T 1vk6_A 151 DSILLAQHTRHR---NGVHTV-LAGFVEVGETLEQAVAREVMEESGIKVKN---LRYVTSQPWPFP------QSLMTAFM 217 (269)
T ss_dssp TEEEEEEETTTC---SSCCBC-EEEECCTTCCHHHHHHHHHHHHHCCEEEE---EEEEEEEEEETT------EEEEEEEE
T ss_pred CEEEEEEecCCC---CCcEEC-CcCcCCCCCCHHHHHHHHHHHHhCceeee---EEEEEEEecCCC------CEEEEEEE
Confidence 489999997643 699976 69999999999999999999999998864 556665554432 13455666
Q ss_pred EEcCCCcccCCCCCceeeEEEEcHHHHHH
Q 016606 312 LKLPEDFVPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 312 l~l~~d~~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
+.+..+ .+.++++|+.+++|++++|+.+
T Consensus 218 a~~~~~-~~~~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 218 AEYDSG-DIVIDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp EEEEEC-CCCCCTTTEEEEEEEETTSCCS
T ss_pred EEECCC-CcCCCCcceEEEEEEEHHHhhh
Confidence 665432 2445678999999999999864
No 59
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.34 E-value=1e-12 Score=122.48 Aligned_cols=112 Identities=14% Similarity=0.084 Sum_probs=76.5
Q ss_pred eeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCC
Q 016606 220 VPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDING 299 (386)
Q Consensus 220 VHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~ 299 (386)
|.+..+..+++++++|+.+|... .++|+|.. +||+++.|||+++||+||+.|||||.... +..++++.+....+
T Consensus 16 v~~vi~~~~~~~~~vLLv~r~~~--~~~g~w~l-PGG~ve~gEs~~~Aa~REl~EEtGl~~~~---~~~l~~~~~~~r~~ 89 (226)
T 2fb1_A 16 IDCIIFGFNEGEISLLLLKRNFE--PAMGEWSL-MGGFVQKDESVDDAAKRVLAELTGLENVY---MEQVGAFGAIDRDP 89 (226)
T ss_dssp EEEEEEEEETTEEEEEEEECSSS--SSTTCEEC-EEEECCTTSCHHHHHHHHHHHHHCCCSCE---EEEEEEECCTTSSS
T ss_pred EEEEEEEEeCCCCEEEEEECcCC--CCCCCEEC-CeeccCCCCCHHHHHHHHHHHHHCCCCCc---eEEEEEeCCCCcCC
Confidence 33333333477889999999763 57899975 69999999999999999999999999864 33444443222222
Q ss_pred CeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHH
Q 016606 300 FSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 300 ~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
.+ ..+.++|.+.++.+-. ..+++|+.++.|++++|+.+
T Consensus 90 ~~--~~v~~~y~a~~~~~~~-~~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 90 GE--RVVSIAYYALININEY-DRELVQKHNAYWVNINELPA 127 (226)
T ss_dssp SS--CEEEEEEEEECCTTSS-CHHHHHHTTEEEEETTSCCC
T ss_pred Cc--eEEEEEEEEEecCccc-ccCCccccceEEEEHHHhhh
Confidence 22 2344566666654321 12346899999999999864
No 60
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.34 E-value=7.2e-12 Score=112.74 Aligned_cols=94 Identities=17% Similarity=0.124 Sum_probs=69.5
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYD 311 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYd 311 (386)
++||+.+|...+ ++|+|++ +||+++.||++++||+||+.|||||.+... ...+...+ ... ..+.++|.
T Consensus 51 ~~vLL~~r~~~~--~~g~w~l-PgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~~~~~~~--~~~----~~~~~~f~ 118 (189)
T 3cng_A 51 NKVLLCKRAIAP--YRGKWTL-PAGFMENNETLVQGAARETLEEANARVEIR---ELYAVYSL--PHI----SQVYMLFR 118 (189)
T ss_dssp TEEEEEEESSSS--STTCEEC-SEEECCTTCCHHHHHHHHHHHHHCCCEEEE---EEEEEEEE--GGG----TEEEEEEE
T ss_pred CEEEEEEccCCC--CCCeEEC-ceeeccCCCCHHHHHHHHHHHHHCCccccc---eeEEEEec--CCC----cEEEEEEE
Confidence 489999997643 4899975 699999999999999999999999987642 33333222 211 24567777
Q ss_pred EEcCCCcccCCCCCceeeEEEEcHHHHH
Q 016606 312 LKLPEDFVPMNQDGEVESFQLMPVAHVA 339 (386)
Q Consensus 312 l~l~~d~~p~~~dgEV~~f~wv~~dEv~ 339 (386)
+....+ .+. .++|+.+++|++++|+.
T Consensus 119 ~~~~~~-~~~-~~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 119 AKLLDL-DFF-PGIESLEVRLFGEQEIP 144 (189)
T ss_dssp EEECCS-CCC-CCTTEEEEEEECTTTCC
T ss_pred EEeCCC-ccC-CCccceeEEEECHHHcC
Confidence 776543 233 36799999999999986
No 61
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.34 E-value=3.1e-12 Score=115.49 Aligned_cols=104 Identities=16% Similarity=0.152 Sum_probs=72.7
Q ss_pred EEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeee
Q 016606 224 GYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYK 303 (386)
Q Consensus 224 ~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~ 303 (386)
+++.++ +++|+.+|. ++|+|. ++||+++.||++.+||+||+.||+||.+.. ...++.+.+....+....
T Consensus 9 ~vi~~~--~~vLL~~r~-----~~g~W~-lPGG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~~~~ 77 (188)
T 3fk9_A 9 CIVVDH--DQVLLLQKP-----RRGWWV-APGGKMEAGESILETVKREYWEETGITVKN---PELKGIFSMVIFDEGKIV 77 (188)
T ss_dssp EEEEET--TEEEEEECT-----TTCCEE-CCEEECCTTCCHHHHHHHHHHHHHSCEESS---CEEEEEEEEEEEETTEEE
T ss_pred EEEEEC--CEEEEEEeC-----CCCeEE-CCeecccCCCCHHHHHHHHHHHHHCCCCCC---ceEEEEEEEEecCCCcce
Confidence 344444 489998884 379996 569999999999999999999999998875 446666666654433221
Q ss_pred eE-EEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHH
Q 016606 304 RD-VIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 304 ~e-v~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
.. .+++|.+....+. +.+. .|..+++|++++++.+
T Consensus 78 ~~~~~~~f~a~~~~~~-~~~~-~e~~~~~W~~~~el~~ 113 (188)
T 3fk9_A 78 SEWMLFTFKATEHEGE-MLKQ-SPEGKLEWKKKDEVLE 113 (188)
T ss_dssp EEEEEEEEEESCEESC-CCSE-ETTEEEEEEEGGGGGG
T ss_pred EEEEEEEEEEECCCCC-CcCC-CCCEeEEEEEHHHhhh
Confidence 12 5677877654321 2222 3446899999999865
No 62
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.34 E-value=1.1e-11 Score=121.01 Aligned_cols=124 Identities=14% Similarity=0.102 Sum_probs=77.8
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCc-eeeEEEEEEeeCCCeeeeEEEEEE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRA-RPVGAVSYTDINGFSYKRDVIFCY 310 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l-~~vg~isy~~~~~~gi~~ev~~vY 310 (386)
+++|+.+|...+ ++|+|+. +||+++.|||+++||+||++|||||.+.....+ ...+...|.+.....-...+.++|
T Consensus 219 ~~vLL~~r~~~~--~~g~w~l-PgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 295 (352)
T 2qjt_B 219 DHILMVQRKAHP--GKDLWAL-PGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVRGRTISHVG 295 (352)
T ss_dssp TEEEEEEESSSS--STTCEEC-SEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTSCTTSEEEEEEE
T ss_pred CEEEEEEEcCCC--CCCeEEC-CCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCCCCCccEEEEEE
Confidence 489999987643 5899975 799999999999999999999999998643211 122222333322110011234445
Q ss_pred EEEcCCCc-ccC-CCCCceeeEEEEcH-HHHHHHHHcCCCCCCCcHHHHHHHHH
Q 016606 311 DLKLPEDF-VPM-NQDGEVESFQLMPV-AHVANVIRRTEFFKPNCSLAIIDFLF 361 (386)
Q Consensus 311 dl~l~~d~-~p~-~~dgEV~~f~wv~~-dEv~~~l~~~~~fkpn~alVlldfl~ 361 (386)
.+.+..+. .+. ..++|+.+++|+++ +|+.++.. .+.++-..++-.++-
T Consensus 296 ~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~~---~~~~~~~~il~~~~~ 346 (352)
T 2qjt_B 296 LFVFDQWPSLPEINAADDAKDVKWISLGSNIKNICD---RMLEDHYQIITILLE 346 (352)
T ss_dssp EEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTTT---SBSTTHHHHHHHHHH
T ss_pred EEEEeCCCCCCccCCCccceEEEEecHHHHHHhhhh---hhChhHHHHHHHHHH
Confidence 45544332 132 24679999999999 99988532 355554444444443
No 63
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.33 E-value=1.6e-12 Score=119.95 Aligned_cols=125 Identities=18% Similarity=0.166 Sum_probs=86.8
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCC-CHHHHHHHHHHhhhCCCccccC--CceeeEEEEEEeeCCCeeeeE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGI-ACGENIIKECEEEAGIPRSISN--RARPVGAVSYTDINGFSYKRD 305 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGE-s~~eAa~REl~EEaGL~~~~~~--~l~~vg~isy~~~~~~gi~~e 305 (386)
+.++++|+++| ++|+|++ +||+++.|| ++++||+||+.||+|+.+...+ ...+++.+.+.+. ...
T Consensus 53 ~~~~~vLl~~r------~~g~w~~-PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-----~~~ 120 (212)
T 1u20_A 53 PIRRVLLMMMR------FDGRLGF-PGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-----QKC 120 (212)
T ss_dssp ECCEEEEEEEE------TTSCEEC-SEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-----SCE
T ss_pred ecCCEEEEEEe------CCCeEEC-CCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-----CcE
Confidence 44568999998 4799975 699999999 9999999999999999987543 1234555544332 125
Q ss_pred EEEEEEEEcCCC-cc--------cCCCCCceeeEEEEcHHHHHHH-------HHcCCCCCCCcHHHHHHHHHHcCCCC
Q 016606 306 VIFCYDLKLPED-FV--------PMNQDGEVESFQLMPVAHVANV-------IRRTEFFKPNCSLAIIDFLFRHGYIR 367 (386)
Q Consensus 306 v~~vYdl~l~~d-~~--------p~~~dgEV~~f~wv~~dEv~~~-------l~~~~~fkpn~alVlldfl~RhG~i~ 367 (386)
.+++|.+.+..+ .. ...+++|+.++.|+|++++.+. +.. .|..+....++..|...|++.
T Consensus 121 ~~~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~~~~~p~f~~~--~~i~~a~~~l~~~l~~~~~~~ 196 (212)
T 1u20_A 121 VTHFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLCN--NFIGNSKSQLLYALRSLKLLR 196 (212)
T ss_dssp EEEEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTSSTBHHHHTTS--CBCTTHHHHHHHHHHHTTSSC
T ss_pred EEEEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhhhcCCchhhhh--hhhHHHHHHHHHHHHhCCCCC
Confidence 567777776432 11 1234679999999999998653 222 244455556777777877764
No 64
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.32 E-value=8.1e-12 Score=121.26 Aligned_cols=107 Identities=15% Similarity=0.214 Sum_probs=66.0
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCce-eeEEEEEEeeCCCeeeeEEEEEE
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRAR-PVGAVSYTDINGFSYKRDVIFCY 310 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~-~vg~isy~~~~~~gi~~ev~~vY 310 (386)
+++|+.+|+.. .++|+|.. +||+++.||++++||+||+.||||+.+...+.+. ......|.+.....-...+.++|
T Consensus 214 ~~vLL~~r~~~--~~~g~w~l-PgG~ve~gE~~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f 290 (341)
T 2qjo_A 214 GHVLMVRRQAK--PGLGLIAL-PGGFIKQNETLVEGMLRELKEETRLKVPLPVLRGSIVDSHVFDAPGRSLRGRTITHAY 290 (341)
T ss_dssp TEEEEEECCSS--SSTTCEEC-SEEECCTTSCHHHHHHHHHHHHHCCSSCHHHHHHTEEEEEEECCTTSCTTSCEEEEEE
T ss_pred CEEEEEEecCC--CCCCeEEC-CCCcCCCCCCHHHHHHHHHhhhhCCccccccccccccceEEEeCCCCCCCCcEEEEEE
Confidence 48999999753 35899964 6999999999999999999999999987532110 11112232221100011344556
Q ss_pred EEEcCCCcccC-CCCCceeeEEEEcHHHHHHH
Q 016606 311 DLKLPEDFVPM-NQDGEVESFQLMPVAHVANV 341 (386)
Q Consensus 311 dl~l~~d~~p~-~~dgEV~~f~wv~~dEv~~~ 341 (386)
.+.++.+-.+. .+++|+.+++|++++|+.++
T Consensus 291 ~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 291 FIQLPGGELPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp EEECCSSSCCCCC------CEEEEEHHHHHHT
T ss_pred EEEecCCCcCccCCCCceeeEEEeeHHHHhhh
Confidence 56654432222 35679999999999999985
No 65
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.30 E-value=3.4e-12 Score=116.70 Aligned_cols=110 Identities=16% Similarity=0.093 Sum_probs=72.9
Q ss_pred eeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeC-
Q 016606 220 VPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDIN- 298 (386)
Q Consensus 220 VHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~- 298 (386)
+.+.+.+.++ ++||+.||+ .+|.|.+ |||+++.|||+.+||+||++||||+.+.. ...++.+.+....
T Consensus 69 ~~v~~vv~~~--~~vLLv~r~-----~~g~w~l-PgG~ve~gEs~~~aa~REl~EEtGl~v~~---~~~l~~~~~~~~~~ 137 (205)
T 3q1p_A 69 VDIRAVVFQN--EKLLFVKEK-----SDGKWAL-PGGWADVGYTPTEVAAKEVFEETGYEVDH---FKLLAIFDKEKHQP 137 (205)
T ss_dssp EEEEEEEEET--TEEEEEEC--------CCEEC-SEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEHHHHSC
T ss_pred ceEEEEEEEC--CEEEEEEEc-----CCCcEEC-CcCccCCCCCHHHHHHHHHHHHHCCcccc---ceEEEEEeccccCC
Confidence 4455555543 489999886 2689975 69999999999999999999999998864 3444444332111
Q ss_pred CCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 299 GFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 299 ~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
+......+.++|.+.+..+ .+.++ .|+.++.|++++++.++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~-~~~~~-~E~~~~~w~~~~el~~l~ 179 (205)
T 3q1p_A 138 SPSATHVYKIFIGCEIIGG-EKKTS-IETEEVEFFGENELPNLS 179 (205)
T ss_dssp CCCSSCEEEEEEEEEEEEE-CCCCC-TTSCCEEEECTTSCCCBC
T ss_pred CCCCceEEEEEEEEEecCC-ccCCC-CcceEEEEEeHHHhhhcC
Confidence 1111223445566665332 23433 799999999999987653
No 66
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.30 E-value=2.4e-12 Score=117.82 Aligned_cols=118 Identities=16% Similarity=0.162 Sum_probs=76.7
Q ss_pred ccCCccceeeeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeE
Q 016606 211 PYFGIKAYAVPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVG 290 (386)
Q Consensus 211 ~~~Gi~~~gVHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg 290 (386)
...|..+..+.+.+.+.++ ++||+.||+ +|.|. +|||+++.||++.+||+||++||+|+.+.. ...++
T Consensus 62 ~~~~y~~~~~~v~~vv~~~--~~vLLvrr~------~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~ 129 (206)
T 3o8s_A 62 NETGYQTPKLDTRAAIFQE--DKILLVQEN------DGLWS-LPGGWCDVDQSVKDNVVKEVKEEAGLDVEA---QRVVA 129 (206)
T ss_dssp ------CCEEEEEEEEEET--TEEEEEECT------TSCEE-CSEEECCTTSCHHHHHHHHHHHHHCEEEEE---EEEEE
T ss_pred cccCCCCCCccEEEEEEEC--CEEEEEEec------CCeEE-CCeeccCCCCCHHHHHHHHHHHHHCCccee---eeEEE
Confidence 3334444456677777655 489999987 68996 569999999999999999999999998765 34445
Q ss_pred EEEEEeeC-CCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHH
Q 016606 291 AVSYTDIN-GFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVI 342 (386)
Q Consensus 291 ~isy~~~~-~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l 342 (386)
.+.+.... +......+.++|.+.+..+ .+.++ .|+.++.|++++++.++.
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~E~~~~~w~~~~el~~l~ 180 (206)
T 3o8s_A 130 ILDKHKNNPAKSAHRVTKVFILCRLLGG-EFQPN-SETVASGFFSLDDLPPLY 180 (206)
T ss_dssp EEEHHHHCC-----CEEEEEEEEEEEEE-CCCCC-SSCSEEEEECTTSCCCBC
T ss_pred EEeccccCCCCCCceEEEEEEEEEecCC-eecCC-CCceEEEEEeHHHhhhcc
Confidence 44322111 1111223445666665432 23333 799999999999987653
No 67
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.29 E-value=1.2e-11 Score=118.70 Aligned_cols=103 Identities=12% Similarity=0.065 Sum_probs=65.4
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEE
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIF 308 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~ 308 (386)
+.++++|+.+|.. .||.|. ++||+++.||++++||+||+.||||+.+..... .+ .|.... ...+.++
T Consensus 111 ~~~~~vLLv~r~~----~~g~W~-lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~~---~~--~~~~~~---~~~~~~~ 177 (271)
T 2a6t_A 111 MSMQQCVLVKGWK----ASSGWG-FPKGKIDKDESDVDCAIREVYEETGFDCSSRIN---PN--EFIDMT---IRGQNVR 177 (271)
T ss_dssp SSSSEEEEEEESS----TTCCCB-CSEEECCTTCCHHHHHHHHHHHHHCCCCTTTCC---TT--CEEEEE---ETTEEEE
T ss_pred CCCCEEEEEEEeC----CCCeEE-CCcccCCCCcCHHHHHHHHHHHHhCCCceeeee---ee--eeccCC---cCCceEE
Confidence 3346899999864 378996 569999999999999999999999999876321 11 122110 1112344
Q ss_pred EEEEEcCC-CcccCC-CCCceeeEEEEcHHHHHHHHHc
Q 016606 309 CYDLKLPE-DFVPMN-QDGEVESFQLMPVAHVANVIRR 344 (386)
Q Consensus 309 vYdl~l~~-d~~p~~-~dgEV~~f~wv~~dEv~~~l~~ 344 (386)
+|.+.... +....+ +++|+.+++|++++|+.++...
T Consensus 178 ~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 178 LYIIPGISLDTRFESRTRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp EEEECCCCTTCCCC------EEEEEEEEGGGSTTCC--
T ss_pred EEEEEEecCcccCCCCCccceeEEEEEEHHHHHHHHhc
Confidence 55544322 211222 4679999999999999887554
No 68
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.26 E-value=8.7e-12 Score=123.49 Aligned_cols=106 Identities=15% Similarity=0.150 Sum_probs=72.2
Q ss_pred CCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCe-------
Q 016606 229 DGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFS------- 301 (386)
Q Consensus 229 dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~g------- 301 (386)
+++.+||+.+|.. .|.|.+ +||+++.|||+++||+||++|||||.+.. ...++.+.|.+..+..
T Consensus 35 ~~~~~vLLv~r~~-----~g~W~l-PgG~ve~gEs~~~AA~REl~EEtGl~~~~---~~~l~~~~~~~~~~g~~~~~~~~ 105 (364)
T 3fjy_A 35 LDSIEVCIVHRPK-----YDDWSW-PKGKLEQNETHRHAAVREIGEETGSPVKL---GPYLCEVEYPLSEEGKKTRHSHD 105 (364)
T ss_dssp HTTEEEEEEEETT-----TTEEEC-CEEECCTTCCHHHHHHHHHHHHHSCCEEE---EEEEEEEC---------------
T ss_pred CCceEEEEEEcCC-----CCCEEC-CcCCCCCCCCHHHHHHHHHHHHhCCeeee---ccccceEEEeccCCCcccccccc
Confidence 5667899998843 289975 69999999999999999999999998865 3455666665432210
Q ss_pred --eeeEEEEEEEEEcCCC---------ccc--CCCCCceeeEEEEcHHHHHHHHH
Q 016606 302 --YKRDVIFCYDLKLPED---------FVP--MNQDGEVESFQLMPVAHVANVIR 343 (386)
Q Consensus 302 --i~~ev~~vYdl~l~~d---------~~p--~~~dgEV~~f~wv~~dEv~~~l~ 343 (386)
.....++.|.+....+ +.| .++++|+.+++|++++|+.+++.
T Consensus 106 ~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 106 CTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp ------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred cccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc
Confidence 0123445566665432 112 34678999999999999998764
No 69
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.26 E-value=2.4e-11 Score=107.59 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=56.7
Q ss_pred EEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCCCeeeeEEEEEEEE
Q 016606 233 FLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDINGFSYKRDVIFCYDL 312 (386)
Q Consensus 233 ~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl 312 (386)
++|+.+|. +|.|.+ +||+++.|||+.+||+||+.|||||.+.. +..++. |.+. . ...++|.+
T Consensus 28 ~vLL~~r~------~g~w~l-PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~--~~~~--~----~~~~~f~~ 89 (163)
T 3f13_A 28 GVLVTASR------GGRYNL-PGGKANRGELRSQALIREIREETGLRINS---MLYLFD--HITP--F----NAHKVYLC 89 (163)
T ss_dssp EEEEEECC---------BBC-SEEECCTTCCHHHHHHHHHHHHHCCCCCE---EEEEEE--EECS--S----EEEEEEEE
T ss_pred EEEEEEEC------CCeEEC-CceeCCCCCCHHHHHHHHHHHHHCcccce---eEEEEE--EecC--C----eEEEEEEE
Confidence 67777774 588975 59999999999999999999999999865 334433 2221 1 34456666
Q ss_pred EcCCCcccCCCCCceeeEEEEcH
Q 016606 313 KLPEDFVPMNQDGEVESFQLMPV 335 (386)
Q Consensus 313 ~l~~d~~p~~~dgEV~~f~wv~~ 335 (386)
.+... +.+++ |+.+++|++.
T Consensus 90 ~~~~~--~~~~~-E~~~~~W~~~ 109 (163)
T 3f13_A 90 IAQGQ--PKPQN-EIERIALVSS 109 (163)
T ss_dssp EC-CC--CCCCT-TCCEEEEESS
T ss_pred EECCc--CccCC-CceEEEEECc
Confidence 66543 44444 9999999993
No 70
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.24 E-value=2.9e-11 Score=104.98 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=64.5
Q ss_pred EEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeE-------------
Q 016606 224 GYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVG------------- 290 (386)
Q Consensus 224 ~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg------------- 290 (386)
+++.+ ++++|+.+|.. +|+|.. +||+++.|||+.+||+||+.||||+.+.....+..+.
T Consensus 6 ~vi~~--~~~vLL~~r~~-----~g~W~l-PgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~ 77 (156)
T 1k2e_A 6 GVLVE--NGKVLLVKHKR-----LGVYIY-PGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPLVI 77 (156)
T ss_dssp EECEE--TTEEEEEECTT-----TCSEEC-SEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSEEECCCCSEE
T ss_pred EEEEE--CCEEEEEEEcC-----CCcEEC-CeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeeccccccccccccee
Confidence 34444 34899998863 689975 6999999999999999999999999887643211000
Q ss_pred EEEEEeeCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHH
Q 016606 291 AVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 291 ~isy~~~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
...+.. .+......+.++|.+..+ ++|+.+++|++++|+.+
T Consensus 78 ~~~~~~-~~~~~~~~~~~~f~~~~~--------~~e~~~~~W~~~~el~~ 118 (156)
T 1k2e_A 78 LEEVVK-YPEETHIHFDLIYLVKRV--------GGDLKNGEWIDVREIDR 118 (156)
T ss_dssp EEEEEE-CSSCEEEEEEEEEEEEEE--------EECCCSCEEEEGGGGGG
T ss_pred eeeeec-CCCCceEEEEEEEEEEec--------CCcEeeeEEeCHHHHhc
Confidence 000111 111111122344555432 35788999999999875
No 71
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.21 E-value=1.7e-10 Score=108.56 Aligned_cols=128 Identities=16% Similarity=0.154 Sum_probs=86.4
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCC--------------------HHHHHHHHHHhhhCCCccccC-------
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIA--------------------CGENIIKECEEEAGIPRSISN------- 284 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs--------------------~~eAa~REl~EEaGL~~~~~~------- 284 (386)
.+||+.||+.+...+||+|.+ +||+++.||+ +.+||+||++||+||......
T Consensus 24 ~~vLl~~R~~~~~~~~g~~~f-PGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~~~~~~~~~~~ 102 (232)
T 3qsj_A 24 IEVLVVRRAKTMRFLPGFVAF-PGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLAVRDGEGTKMD 102 (232)
T ss_dssp EEEEEEEECTTCSSSTTCEEC-SEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCSEECTTCCBCC
T ss_pred eEEEEEEccCCCCCCCCcEEC-CceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceeccccccCcccC
Confidence 699999999988888999975 6999999998 489999999999999764211
Q ss_pred --------------------------------CceeeEEEEEEeeCCCeeeeEEEEEEEEEcCCCcccCCCCCceeeEEE
Q 016606 285 --------------------------------RARPVGAVSYTDINGFSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQL 332 (386)
Q Consensus 285 --------------------------------~l~~vg~isy~~~~~~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~w 332 (386)
.+.+.+. +....+.. .+.-.+.|.+.++....+..+.+|+.+..|
T Consensus 103 ~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~ar--WiTP~~~~-rRfdT~FFla~lpq~~~v~~d~~E~~~~~W 179 (232)
T 3qsj_A 103 TPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGR--FVTPPTQP-VRFDTRFFLCVGQHLGEPRLHGAELDAALW 179 (232)
T ss_dssp SCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEE--EECCTTSS-SEEEEEEEEEECSSCCCCCCCSSSEEEEEE
T ss_pred hhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEE--EcCCcCCc-eeEEEEEEEEECCCCCCCCCCCCceEEEEE
Confidence 0111111 11111111 112234455556632112456789999999
Q ss_pred EcHHHHHHHHHcCCCCCCCcHHHHHHHHHHc
Q 016606 333 MPVAHVANVIRRTEFFKPNCSLAIIDFLFRH 363 (386)
Q Consensus 333 v~~dEv~~~l~~~~~fkpn~alVlldfl~Rh 363 (386)
++++|+.+...+++.+-+.....+|.-|.+.
T Consensus 180 ~~p~eal~~~~~G~i~L~pPT~~~L~~L~~~ 210 (232)
T 3qsj_A 180 TPARDMLTRIQSGELPAVRPTIAVLKALVAC 210 (232)
T ss_dssp EEHHHHHHHHHTTSSCCCHHHHHHHHHHHHC
T ss_pred EcHHHHHHHHHcCCceechhHHHHHHHHHcC
Confidence 9999999999987544444556666666654
No 72
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=99.14 E-value=7.6e-11 Score=117.54 Aligned_cols=122 Identities=15% Similarity=0.141 Sum_probs=86.0
Q ss_pred eeEEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccccCCceeeEEEEEEeeCC
Q 016606 220 VPLNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYTDING 299 (386)
Q Consensus 220 VHl~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~~~l~~vg~isy~~~~~ 299 (386)
.++++.++.|.++++|++||... ..|+|+|++ +||+++.| ++++|++||+.||+|+.+...+ .++.+.+.+...
T Consensus 240 ~~~~~~vi~~~~g~vLL~rR~~~-g~~~GlWef-PGG~ve~g-t~~~al~REl~EE~Gl~v~~~~---~l~~~~h~~~h~ 313 (369)
T 3fsp_A 240 VPLAVAVLADDEGRVLIRKRDST-GLLANLWEF-PSCETDGA-DGKEKLEQMVGEQYGLQVELTE---PIVSFEHAFSHL 313 (369)
T ss_dssp EEEEEEEEECSSSEEEEEECCSS-STTTTCEEC-CEEECSSS-CTHHHHHHHHTTSSSCCEEECC---CCCEEEEECSSE
T ss_pred EEEEEEEEEeCCCEEEEEECCCC-CCcCCcccC-CCcccCCC-CcHHHHHHHHHHHhCCceeeec---ccccEEEEcceE
Confidence 44555555566679999999864 569999986 59999999 9999999999999999987643 455666655331
Q ss_pred CeeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHHHHc
Q 016606 300 FSYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFLFRH 363 (386)
Q Consensus 300 ~gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl~Rh 363 (386)
.-.+++|.+.+..+ ..|..++.|++++|+.+. .+ |....-+++.+..+
T Consensus 314 ----~~~~~~~~~~~~~~------~~e~~~~~Wv~~~el~~~-----~l-~~~~~~il~~l~~~ 361 (369)
T 3fsp_A 314 ----VWQLTVFPGRLVHG------GPVEEPYRLAPEDELKAY-----AF-PVSHQRVWREYKEW 361 (369)
T ss_dssp ----EEEEEEEEEEECCS------SCCCTTEEEEEGGGGGGS-----CC-CHHHHHHHHHHHHH
T ss_pred ----EEEEEEEEEEEcCC------CCCccccEEeeHHHhhhC-----CC-CHHHHHHHHHHHHH
Confidence 13356777776542 357889999999998652 23 33334455555443
No 73
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.08 E-value=2.1e-10 Score=106.62 Aligned_cols=126 Identities=16% Similarity=0.163 Sum_probs=80.6
Q ss_pred EEEEEEeCCCCCCCCCccccccccCCCCCC-CHHHHHHHHHHhhhCCCccccCCceeeEEEE-EEeeCCCeeeeEEEEEE
Q 016606 233 FLWIGKRSQVKSTYPGMLDILAGGGLPHGI-ACGENIIKECEEEAGIPRSISNRARPVGAVS-YTDINGFSYKRDVIFCY 310 (386)
Q Consensus 233 ~llIqrRS~~K~t~PG~wD~~vaGgV~aGE-s~~eAa~REl~EEaGL~~~~~~~l~~vg~is-y~~~~~~gi~~ev~~vY 310 (386)
+++++.|. +|+|++ +||+++.|| ++++||+||++||||+.+.... +..++.+. +..... ..+.++|
T Consensus 66 ~~ll~~r~------~g~w~l-PGG~ve~gE~t~~eaa~REl~EEtGl~~~~~~-l~~l~~~~~~~~~~~----~~~~~~f 133 (217)
T 2xsq_A 66 AILMQMRF------DGRLGF-PGGFVDTQDRSLEDGLNRELREELGEAAAAFR-VERTDYRSSHVGSGP----RVVAHFY 133 (217)
T ss_dssp EEEEEEET------TSCEEC-SEEECCTTCSSHHHHHHHHHHHHHCGGGGGCC-CCGGGEEEEEECSSS----SEEEEEE
T ss_pred cEEEEEcc------CCeEEC-CceecCCCCCCHHHHHHHHHHHHHCCCCccce-eEEEEEEeecCCCCC----eEEEEEE
Confidence 46666664 689975 699999999 9999999999999999887421 22222221 111111 2455667
Q ss_pred EEEcCCCcc---------cCCCCCceeeEEEEcHHHHHHHHH---c--CCCCCCCcHHHHHHHHHHcCCCCCCC
Q 016606 311 DLKLPEDFV---------PMNQDGEVESFQLMPVAHVANVIR---R--TEFFKPNCSLAIIDFLFRHGYIRPEY 370 (386)
Q Consensus 311 dl~l~~d~~---------p~~~dgEV~~f~wv~~dEv~~~l~---~--~~~fkpn~alVlldfl~RhG~i~p~~ 370 (386)
.+.++.+-. ....+.|+.++.|+|++++.+... . ...|-.+...-++..+.+.|++.+++
T Consensus 134 ~~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~~~~P~~L~~~~l~~~~~~i~~~l~~~~~~~~~~ 207 (217)
T 2xsq_A 134 AKRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFIGSAREQLLEALQDLGLLQSGS 207 (217)
T ss_dssp EEECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTBHHHHTTSCBCTTHHHHHHHHHHHTTTTC---
T ss_pred EEEeccccceecccccccccccCCceeeEEEEEHHHhhhccccCcHHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 777653211 133357999999999998863211 0 01244555667888899999998776
No 74
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.99 E-value=2.5e-09 Score=103.49 Aligned_cols=122 Identities=13% Similarity=0.057 Sum_probs=73.2
Q ss_pred eEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCccc-----------cCCceee-EEEEEEe--e
Q 016606 232 KFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSI-----------SNRARPV-GAVSYTD--I 297 (386)
Q Consensus 232 ~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~-----------~~~l~~v-g~isy~~--~ 297 (386)
.++|+.+|.. +|+|.+ +||+|+.||++.+||+||+.|||||..+. ...+... |...|.. .
T Consensus 139 l~vLl~~r~~-----~g~W~l-PGG~Ve~GEs~~eAA~REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~ 212 (292)
T 1q33_A 139 LQFVAIKRKD-----CGEWAI-PGGMVDPGEKISATLKREFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVD 212 (292)
T ss_dssp EEEEEEECTT-----TCSEEC-CCEECCTTCCHHHHHHHHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECC
T ss_pred eEEEEEEecC-----CCcEeC-CCcccCCCCCHHHHHHHHHHHHhCCccccccccchhhHHHHHHHhhcccceeeccccc
Confidence 4799999864 389975 69999999999999999999999998321 1111111 3222321 1
Q ss_pred CC----CeeeeEEEEEEEEEcC---CCcccCCCCCceeeEEEEcHHHHHHHHHcCCCCCCCcHHHHHHHHHHcCCCC
Q 016606 298 NG----FSYKRDVIFCYDLKLP---EDFVPMNQDGEVESFQLMPVAHVANVIRRTEFFKPNCSLAIIDFLFRHGYIR 367 (386)
Q Consensus 298 ~~----~gi~~ev~~vYdl~l~---~d~~p~~~dgEV~~f~wv~~dEv~~~l~~~~~fkpn~alVlldfl~RhG~i~ 367 (386)
.+ ..+...+.|.|..... ....+ ..++|+.+++|++++|+.+ +.++-.-++-+++.+++-.-
T Consensus 213 dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~-~~~~E~~~~~W~~~del~~-------L~~~h~~il~~~~~~~~a~~ 281 (292)
T 1q33_A 213 DPRNTDNAWMETEAVNYHDETGEIMDNLML-EAGDDAGKVKWVDINDKLK-------LYASHSQFIKLVAEKRDAHW 281 (292)
T ss_dssp CTTCCSSEEEEEEEEEEEESSSTTTTTCCC-CCCTTCSEEEEEECCTTCC-------CSTTHHHHHHHHHHHHTCCC
T ss_pred CCCCCcccEEEEEEEEEEeCCCcccccccc-CCCCccceEEEEEcccCcc-------cCHhHHHHHHHHHHHhcCcc
Confidence 11 1122122333332111 11112 2467899999999999852 34555556666666665333
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.55 E-value=8.7e-08 Score=87.89 Aligned_cols=151 Identities=16% Similarity=0.134 Sum_probs=101.5
Q ss_pred EEEeccccccCC-ccceeeeEEEEEEECCc--------eEEEEEEeCCCCCCCCCccccccccCCCCCC-CHHHHHHHHH
Q 016606 203 FSLDRAAAPYFG-IKAYAVPLNGYVEKDGQ--------KFLWIGKRSQVKSTYPGMLDILAGGGLPHGI-ACGENIIKEC 272 (386)
Q Consensus 203 ~~ieRaa~~~~G-i~~~gVHl~~yv~~dg~--------~~llIqrRS~~K~t~PG~wD~~vaGgV~aGE-s~~eAa~REl 272 (386)
..++|+.+-.+| =+..+.|+.-|.-+++. ..+++|.| +.|+|++ +||+|+.|| |+++|+.||+
T Consensus 6 ~~i~~~eal~~~~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R------~~G~weF-PGGkVe~gE~t~e~aL~REl 78 (214)
T 3kvh_A 6 KQISRVEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMR------FDGLLGF-PGGFVDRRFWSLEDGLNRVL 78 (214)
T ss_dssp CEECHHHHTTSCTTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEE------TTSCEEC-SEEEECTTTCCHHHHHHHSC
T ss_pred cccCHHHHHhhccCccEeeEEEEEcCCccccccccchhheEEEeee------eCCEEeC-CCccCCCCCCCHHHHHHHHH
Confidence 357788877775 34567888888753221 24888988 4599986 599999999 9999999999
Q ss_pred HhhhCC-CccccCCceeeEEEEEEeeCCCeeeeEEEEEEEEEcCCC---------cccCCCCCceeeEEEEcHHHH----
Q 016606 273 EEEAGI-PRSISNRARPVGAVSYTDINGFSYKRDVIFCYDLKLPED---------FVPMNQDGEVESFQLMPVAHV---- 338 (386)
Q Consensus 273 ~EEaGL-~~~~~~~l~~vg~isy~~~~~~gi~~ev~~vYdl~l~~d---------~~p~~~dgEV~~f~wv~~dEv---- 338 (386)
.||+|+ .+.. ..+...+.+.+. ..-++++|.+.+..+ ..-+...-||-...-+|+=.+
T Consensus 79 ~EElg~~~V~~---~~y~~s~~~~yp-----~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D~~ 150 (214)
T 3kvh_A 79 GLGLGCLRLTE---ADYLSSHLTEGP-----HRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDRV 150 (214)
T ss_dssp CSCC---CCCG---GGEEEEEEC---------CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTTSS
T ss_pred HHhhCCeeeee---eeeEEEEeccCC-----CEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEeccCC
Confidence 999997 3443 334433433332 124568888887532 111222468999988886544
Q ss_pred ---HHHHHcCCCCCCCcHHHHHHHHHHcCCCCCCC
Q 016606 339 ---ANVIRRTEFFKPNCSLAIIDFLFRHGYIRPEY 370 (386)
Q Consensus 339 ---~~~l~~~~~fkpn~alVlldfl~RhG~i~p~~ 370 (386)
...+.+ -|--++..-++.-|...+++.+++
T Consensus 151 gGlP~FL~n--sFig~ar~qLl~aL~~l~ll~~~~ 183 (214)
T 3kvh_A 151 GGFPNFLSN--AFVSTAKCQLLFALKVLNMMPEEK 183 (214)
T ss_dssp TBHHHHHTS--CBCTTHHHHHHHHHHHTTSSCHHH
T ss_pred CchhHHHHh--hhHHHHHHHHHHHHHHcCCCCHHH
Confidence 444554 377788888999999999998765
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=97.78 E-value=0.00016 Score=66.75 Aligned_cols=104 Identities=15% Similarity=0.130 Sum_probs=61.8
Q ss_pred EEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhhCCCcccc---CCceeeEEEEEEe-eC--
Q 016606 225 YVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEAGIPRSIS---NRARPVGAVSYTD-IN-- 298 (386)
Q Consensus 225 yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEaGL~~~~~---~~l~~vg~isy~~-~~-- 298 (386)
.+..++..+|++.|+.. +.|. ++||.+++||++++|++||+.||+|+..... +....+|...... +.
T Consensus 66 l~~~~~~phVLLlq~~~------~~f~-LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~wwRp~fet~~ 138 (208)
T 3bho_A 66 IVHEHRLPHVLLLQLGT------TFFK-LPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGNWWRPNFEPPQ 138 (208)
T ss_dssp EEEETTEEEEEEEEEET------TEEE-CSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEEEEECSSSSCC
T ss_pred EEcCCCCcEEEEEEcCC------CcEE-CCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEEEecCCCCCcC
Confidence 33334446788877743 3675 5699999999999999999999999742211 1123444421111 00
Q ss_pred -C---Cee--eeEEEEEEEEEcCCCc---ccCCCCCceeeEEEEcHHHHHH
Q 016606 299 -G---FSY--KRDVIFCYDLKLPEDF---VPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 299 -~---~gi--~~ev~~vYdl~l~~d~---~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
+ ..+ -.|+.-+|.+.+|+.. +|++ -...-+|+=|+.+
T Consensus 139 YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vPkn-----~kL~AvPLfely~ 184 (208)
T 3bho_A 139 YPYIPAHITKPKEHKKLFLVQLQEKALFAVPKN-----YKLVAAPLFELYD 184 (208)
T ss_dssp BSSCCTTCCSCSEEEEEEEEECCSSEEEEEETT-----CEEEEEEHHHHTT
T ss_pred CCCCCcccCchhhheeeeeEecCccceEecCCC-----CeEEeecHHhhhc
Confidence 0 001 1388889999998753 3332 2345566666543
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=97.50 E-value=7.1e-05 Score=73.40 Aligned_cols=89 Identities=12% Similarity=0.114 Sum_probs=54.8
Q ss_pred EEEEEEECCceEEEEEEeCCCCCCCCCccccccccCCCCCCCHHHHHHHHHHhhh-CCCccccCCceeeEEEEEEeeCCC
Q 016606 222 LNGYVEKDGQKFLWIGKRSQVKSTYPGMLDILAGGGLPHGIACGENIIKECEEEA-GIPRSISNRARPVGAVSYTDINGF 300 (386)
Q Consensus 222 l~~yv~~dg~~~llIqrRS~~K~t~PG~wD~~vaGgV~aGEs~~eAa~REl~EEa-GL~~~~~~~l~~vg~isy~~~~~~ 300 (386)
+.+.+..+ ++||++ . ..| |-.+ ||.+ |++..++++||++||+ ||.++.. ...+. |......
T Consensus 186 vgaii~~~--g~vLL~---~----~~G-W~LP-G~~~--~~~~~~~a~RE~~EEttGl~v~~~---~L~~v--~~~~~~~ 247 (321)
T 3rh7_A 186 LGAVLEQQ--GAVFLA---G----NET-LSLP-NCTV--EGGDPARTLAAYLEQLTGLNVTIG---FLYSV--YEDKSDG 247 (321)
T ss_dssp EEEEEESS--SCEEEB---C----SSE-EBCC-EEEE--SSSCHHHHHHHHHHHHHSSCEEEE---EEEEE--EECTTTC
T ss_pred EEEEEEEC--CEEEEe---e----CCC-ccCC-cccC--CCChhHHHHHHHHHHhcCCEEeec---eEEEE--EEcCCCc
Confidence 44444433 467777 1 237 8654 7755 5555569999999998 9999753 22222 3222211
Q ss_pred eeeeEEEEEEEEEcCCCcccCCCCCceeeEEEEcHHHHHH
Q 016606 301 SYKRDVIFCYDLKLPEDFVPMNQDGEVESFQLMPVAHVAN 340 (386)
Q Consensus 301 gi~~ev~~vYdl~l~~d~~p~~~dgEV~~f~wv~~dEv~~ 340 (386)
.+..+|.+++.++ +..+++|++++|+..
T Consensus 248 ----~~~i~f~~~~~~g--------~~~e~~~f~~~elp~ 275 (321)
T 3rh7_A 248 ----RQNIVYHALASDG--------APRQGRFLRPAELAA 275 (321)
T ss_dssp ----CEEEEEEEEECSS--------CCSSSEEECHHHHTT
T ss_pred ----eEEEEEEEEeCCC--------CeeeeEEECHHHCCC
Confidence 2334677776432 236789999999976
Done!