Query 016612
Match_columns 386
No_of_seqs 176 out of 2103
Neff 10.1
Searched_HMMs 46136
Date Fri Mar 29 08:25:27 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016612.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016612hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0626 MetC Cystathionine bet 100.0 1.2E-55 2.5E-60 399.5 41.1 379 6-384 5-395 (396)
2 PRK08861 cystathionine gamma-s 100.0 1.2E-54 2.7E-59 401.8 42.8 381 4-384 1-384 (388)
3 PLN02509 cystathionine beta-ly 100.0 2E-54 4.3E-59 406.2 41.7 385 2-386 80-464 (464)
4 TIGR01329 cysta_beta_ly_E cyst 100.0 1.9E-53 4.1E-58 395.4 42.8 377 10-386 2-378 (378)
5 PF01053 Cys_Met_Meta_PP: Cys/ 100.0 3.2E-53 6.9E-58 389.6 36.6 372 11-382 2-386 (386)
6 PRK08045 cystathionine gamma-s 100.0 2.9E-52 6.4E-57 387.3 42.5 377 8-384 4-383 (386)
7 PRK06176 cystathionine gamma-s 100.0 5E-52 1.1E-56 385.4 42.5 377 9-385 3-380 (380)
8 PRK08064 cystathionine beta-ly 100.0 1.9E-51 4.2E-56 383.5 42.9 380 5-384 3-383 (390)
9 TIGR02080 O_succ_thio_ly O-suc 100.0 2.6E-51 5.7E-56 380.8 42.7 377 8-384 3-382 (382)
10 PRK07671 cystathionine beta-ly 100.0 3E-51 6.5E-56 380.2 42.8 374 9-382 3-377 (377)
11 PRK08249 cystathionine gamma-s 100.0 8.5E-51 1.8E-55 379.1 41.4 380 4-384 4-394 (398)
12 PRK08776 cystathionine gamma-s 100.0 1.5E-50 3.3E-55 377.8 42.5 376 9-384 13-391 (405)
13 PRK08114 cystathionine beta-ly 100.0 9.1E-51 2E-55 374.0 40.2 376 4-384 1-394 (395)
14 PRK09028 cystathionine beta-ly 100.0 1.5E-50 3.2E-55 373.9 40.5 371 9-384 5-388 (394)
15 KOG0053 Cystathionine beta-lya 100.0 6.3E-51 1.4E-55 363.2 36.4 376 9-385 22-408 (409)
16 PRK08248 O-acetylhomoserine am 100.0 2.1E-50 4.6E-55 378.9 41.4 384 1-384 1-428 (431)
17 PRK08574 cystathionine gamma-s 100.0 3.9E-50 8.5E-55 373.4 42.7 373 9-383 3-384 (385)
18 PRK06702 O-acetylhomoserine am 100.0 1E-49 2.2E-54 371.2 40.4 379 5-383 3-424 (432)
19 PRK07504 O-succinylhomoserine 100.0 1.5E-49 3.3E-54 371.3 41.7 379 7-385 9-397 (398)
20 PRK05967 cystathionine beta-ly 100.0 1.2E-49 2.5E-54 367.1 40.1 371 8-385 12-393 (395)
21 PRK07810 O-succinylhomoserine 100.0 1.5E-49 3.3E-54 371.2 40.8 373 9-381 16-402 (403)
22 PRK08133 O-succinylhomoserine 100.0 1.4E-49 2.9E-54 371.1 40.4 375 8-383 6-390 (390)
23 TIGR01328 met_gam_lyase methio 100.0 2.7E-49 5.8E-54 368.9 42.1 376 8-384 3-391 (391)
24 PRK06234 methionine gamma-lyas 100.0 4.8E-49 1E-53 368.6 42.1 383 1-384 1-398 (400)
25 PRK07811 cystathionine gamma-s 100.0 7.8E-49 1.7E-53 365.7 42.6 372 8-382 12-387 (388)
26 COG2873 MET17 O-acetylhomoseri 100.0 1E-49 2.2E-54 344.8 33.6 380 5-384 4-426 (426)
27 PRK08134 O-acetylhomoserine am 100.0 7.3E-49 1.6E-53 368.3 41.8 384 1-384 1-428 (433)
28 PRK07049 methionine gamma-lyas 100.0 1.2E-48 2.5E-53 367.6 42.5 377 7-384 16-427 (427)
29 PRK06460 hypothetical protein; 100.0 1.3E-48 2.8E-53 362.7 42.0 372 8-384 2-375 (376)
30 PRK07812 O-acetylhomoserine am 100.0 1.2E-48 2.6E-53 366.4 40.9 377 8-384 13-432 (436)
31 PRK06084 O-acetylhomoserine am 100.0 1.2E-48 2.6E-53 366.9 40.9 376 9-384 3-423 (425)
32 PRK07503 methionine gamma-lyas 100.0 1.8E-48 4E-53 364.7 41.6 376 8-384 9-397 (403)
33 TIGR01324 cysta_beta_ly_B cyst 100.0 2.2E-48 4.9E-53 359.9 41.6 366 12-383 2-376 (377)
34 PRK05613 O-acetylhomoserine am 100.0 1.4E-48 3.1E-53 365.9 40.7 381 3-383 8-436 (437)
35 PRK06767 methionine gamma-lyas 100.0 2.2E-48 4.8E-53 363.1 41.8 372 6-383 3-385 (386)
36 PRK05939 hypothetical protein; 100.0 1.6E-48 3.4E-53 363.3 40.6 360 23-383 7-396 (397)
37 TIGR01325 O_suc_HS_sulf O-succ 100.0 3.5E-48 7.7E-53 360.9 42.0 370 11-381 2-380 (380)
38 cd00614 CGS_like CGS_like: Cys 100.0 2.4E-48 5.1E-53 361.6 40.5 359 24-382 1-369 (369)
39 PRK05994 O-acetylhomoserine am 100.0 3.8E-48 8.1E-53 364.5 41.9 379 6-384 5-427 (427)
40 PRK07050 cystathionine beta-ly 100.0 1.6E-47 3.5E-52 356.9 39.9 373 7-385 8-393 (394)
41 PRK07269 cystathionine gamma-s 100.0 5.2E-47 1.1E-51 349.5 41.1 359 6-382 4-363 (364)
42 TIGR01326 OAH_OAS_sulfhy OAH/O 100.0 6.4E-47 1.4E-51 356.3 40.6 373 9-382 2-418 (418)
43 PRK08247 cystathionine gamma-s 100.0 1.5E-46 3.3E-51 348.6 40.5 361 8-384 4-365 (366)
44 PRK06434 cystathionine gamma-l 100.0 2E-46 4.3E-51 345.8 39.1 365 9-383 9-384 (384)
45 PRK07582 cystathionine gamma-l 100.0 4.7E-46 1E-50 344.7 40.3 363 7-384 2-366 (366)
46 PLN02242 methionine gamma-lyas 100.0 4.4E-46 9.5E-51 348.8 39.5 372 9-384 18-416 (418)
47 PRK05968 hypothetical protein; 100.0 1.8E-44 4E-49 336.5 41.3 366 11-384 11-387 (389)
48 COG0436 Aspartate/tyrosine/aro 100.0 3.6E-32 7.8E-37 252.7 27.7 291 48-383 60-391 (393)
49 COG0520 csdA Selenocysteine ly 100.0 3.7E-31 8.1E-36 245.5 25.0 300 56-384 67-402 (405)
50 PLN02187 rooty/superroot1 100.0 2.8E-29 6.1E-34 239.4 29.1 330 9-383 64-438 (462)
51 PRK06207 aspartate aminotransf 100.0 5.7E-29 1.2E-33 234.6 29.3 296 45-384 70-403 (405)
52 PRK05957 aspartate aminotransf 100.0 9.4E-29 2E-33 232.3 29.2 294 47-383 59-385 (389)
53 KOG0257 Kynurenine aminotransf 100.0 2.8E-30 6E-35 228.4 16.6 251 11-271 30-326 (420)
54 PRK07324 transaminase; Validat 100.0 6.6E-29 1.4E-33 231.8 26.4 293 45-384 54-371 (373)
55 PRK06290 aspartate aminotransf 100.0 1.3E-28 2.9E-33 231.9 28.0 322 10-385 43-407 (410)
56 PRK07681 aspartate aminotransf 100.0 4.6E-28 1E-32 228.5 28.4 288 47-379 64-384 (399)
57 PRK06108 aspartate aminotransf 100.0 3.9E-28 8.5E-33 228.2 27.6 293 46-382 54-381 (382)
58 PLN00143 tyrosine/nicotianamin 100.0 4.8E-28 1E-32 228.6 28.1 328 10-383 31-404 (409)
59 PRK05942 aspartate aminotransf 100.0 2E-28 4.3E-33 230.6 25.3 289 46-381 66-387 (394)
60 PLN00175 aminotransferase fami 100.0 4.2E-28 9.2E-33 229.0 27.5 296 45-382 83-412 (413)
61 PLN00145 tyrosine/nicotianamin 100.0 6.5E-28 1.4E-32 228.6 28.6 201 10-216 51-277 (430)
62 TIGR03540 DapC_direct LL-diami 100.0 3.2E-28 7E-33 228.6 25.8 286 46-377 60-377 (383)
63 COG1167 ARO8 Transcriptional r 100.0 3.9E-29 8.4E-34 237.6 19.5 303 46-383 125-455 (459)
64 PRK07366 succinyldiaminopimela 100.0 5.3E-28 1.2E-32 227.5 25.6 288 46-379 61-386 (388)
65 TIGR03537 DapC succinyldiamino 100.0 1.8E-27 3.9E-32 220.7 28.4 262 46-331 29-320 (350)
66 PLN02656 tyrosine transaminase 100.0 1.5E-27 3.3E-32 225.4 28.2 329 9-383 29-403 (409)
67 PRK08361 aspartate aminotransf 100.0 7.8E-28 1.7E-32 226.5 25.7 293 46-383 63-390 (391)
68 PRK12414 putative aminotransfe 100.0 3.2E-27 7E-32 221.5 29.7 287 46-377 59-378 (384)
69 PRK08068 transaminase; Reviewe 100.0 7.7E-28 1.7E-32 226.3 25.0 286 46-378 63-381 (389)
70 PRK13355 bifunctional HTH-doma 100.0 2.4E-27 5.2E-32 230.1 28.7 292 47-383 179-514 (517)
71 PRK08912 hypothetical protein; 100.0 6.2E-28 1.3E-32 226.9 23.8 295 46-383 56-386 (387)
72 PTZ00377 alanine aminotransfer 100.0 5.9E-28 1.3E-32 232.4 23.9 198 45-247 107-347 (481)
73 PLN02450 1-aminocyclopropane-1 100.0 6.7E-27 1.5E-31 223.5 30.5 292 46-384 79-431 (468)
74 PRK15481 transcriptional regul 100.0 2.9E-27 6.3E-32 225.2 27.9 290 46-382 114-430 (431)
75 PRK09276 LL-diaminopimelate am 100.0 3.8E-27 8.2E-32 221.5 27.9 287 46-378 62-380 (385)
76 PRK07682 hypothetical protein; 100.0 3.6E-27 7.8E-32 221.1 27.4 293 46-384 50-377 (378)
77 PRK09147 succinyldiaminopimela 100.0 7.3E-27 1.6E-31 220.3 29.1 296 45-382 57-395 (396)
78 KOG0259 Tyrosine aminotransfer 100.0 2.1E-27 4.5E-32 206.7 23.1 328 7-383 57-433 (447)
79 PRK06348 aspartate aminotransf 100.0 7E-27 1.5E-31 219.4 28.7 288 45-378 58-377 (384)
80 PRK08960 hypothetical protein; 100.0 4.4E-27 9.6E-32 221.0 27.3 289 47-379 63-380 (387)
81 PRK06855 aminotransferase; Val 100.0 9.2E-27 2E-31 221.2 29.2 169 44-216 64-258 (433)
82 COG0079 HisC Histidinol-phosph 100.0 1.9E-27 4.2E-32 217.3 23.5 285 51-384 53-355 (356)
83 PRK08636 aspartate aminotransf 100.0 1.1E-26 2.4E-31 219.3 28.4 294 45-383 63-400 (403)
84 PRK05764 aspartate aminotransf 100.0 7.3E-27 1.6E-31 220.3 26.1 291 46-383 61-391 (393)
85 PLN02607 1-aminocyclopropane-1 100.0 2.4E-26 5.2E-31 218.0 29.7 292 47-383 89-437 (447)
86 COG1104 NifS Cysteine sulfinat 100.0 4E-27 8.6E-32 210.6 22.8 298 56-382 45-372 (386)
87 PRK07550 hypothetical protein; 100.0 1.6E-26 3.4E-31 217.3 28.2 280 45-369 59-370 (386)
88 PRK09295 bifunctional cysteine 100.0 7E-27 1.5E-31 221.1 25.3 296 56-383 68-400 (406)
89 PRK06225 aspartate aminotransf 100.0 1.1E-26 2.4E-31 218.0 25.9 285 57-384 68-377 (380)
90 PRK06107 aspartate aminotransf 100.0 1.8E-26 4E-31 217.7 27.5 293 46-384 63-401 (402)
91 TIGR01822 2am3keto_CoA 2-amino 100.0 1.5E-26 3.2E-31 218.3 26.8 323 11-384 38-390 (393)
92 TIGR01265 tyr_nico_aTase tyros 100.0 2.7E-26 5.9E-31 216.7 28.4 291 47-383 67-401 (403)
93 TIGR01264 tyr_amTase_E tyrosin 100.0 1.8E-26 3.8E-31 218.0 26.6 293 46-384 66-400 (401)
94 PTZ00433 tyrosine aminotransfe 100.0 4.3E-26 9.4E-31 215.8 29.2 292 46-383 68-408 (412)
95 PRK07309 aromatic amino acid a 100.0 7.5E-26 1.6E-30 212.8 30.6 293 47-384 61-389 (391)
96 PLN02376 1-aminocyclopropane-1 100.0 6.1E-26 1.3E-30 217.6 30.4 290 47-382 88-437 (496)
97 TIGR03538 DapC_gpp succinyldia 100.0 2.7E-26 5.9E-31 216.1 27.6 292 45-378 56-390 (393)
98 PRK09148 aminotransferase; Val 100.0 4E-26 8.6E-31 215.5 28.4 292 46-382 61-389 (405)
99 PRK08363 alanine aminotransfer 100.0 2.9E-26 6.4E-31 216.3 27.6 294 46-383 63-394 (398)
100 PRK07590 L,L-diaminopimelate a 100.0 1.2E-26 2.5E-31 219.6 24.8 291 45-380 68-408 (409)
101 PRK07179 hypothetical protein; 100.0 2.5E-26 5.3E-31 217.3 27.0 328 8-385 51-400 (407)
102 PRK07683 aminotransferase A; V 100.0 5.5E-26 1.2E-30 213.4 28.6 291 46-382 58-382 (387)
103 PRK09265 aminotransferase AlaT 100.0 4.3E-26 9.2E-31 215.5 27.8 295 46-384 65-402 (404)
104 PRK06425 histidinol-phosphate 100.0 1.4E-26 3E-31 213.0 23.7 276 52-381 37-331 (332)
105 PRK08175 aminotransferase; Val 100.0 5.1E-26 1.1E-30 214.3 27.6 296 45-385 59-391 (395)
106 PRK09082 methionine aminotrans 100.0 4.1E-26 8.9E-31 214.3 26.9 279 46-367 60-371 (386)
107 PRK00950 histidinol-phosphate 100.0 1.1E-26 2.4E-31 216.7 22.6 313 12-382 35-361 (361)
108 PRK02731 histidinol-phosphate 100.0 1.7E-26 3.8E-31 215.8 23.9 276 58-383 70-366 (367)
109 PRK10874 cysteine sulfinate de 100.0 4.4E-26 9.6E-31 215.4 26.8 295 56-383 64-398 (401)
110 PRK05839 hypothetical protein; 100.0 4.5E-26 9.7E-31 212.9 26.4 289 45-382 52-373 (374)
111 PRK08056 threonine-phosphate d 100.0 4.2E-26 9.1E-31 211.9 25.9 277 57-382 57-354 (356)
112 PLN02231 alanine transaminase 100.0 1.9E-26 4.2E-31 222.2 24.3 180 46-229 161-382 (534)
113 TIGR03392 FeS_syn_CsdA cystein 100.0 5E-26 1.1E-30 214.9 26.5 295 56-383 61-395 (398)
114 COG1168 MalY Bifunctional PLP- 100.0 2.3E-25 5E-30 195.4 28.4 298 42-384 51-387 (388)
115 PRK07337 aminotransferase; Val 100.0 1.1E-25 2.4E-30 211.7 28.6 289 46-378 60-381 (388)
116 PRK07777 aminotransferase; Val 100.0 6.8E-26 1.5E-30 213.1 27.1 294 46-381 54-384 (387)
117 PRK06358 threonine-phosphate d 100.0 5.6E-26 1.2E-30 210.7 26.0 274 57-381 56-353 (354)
118 PLN03026 histidinol-phosphate 100.0 1.9E-26 4.1E-31 215.7 23.0 274 56-379 87-378 (380)
119 PLN02855 Bifunctional selenocy 100.0 5.5E-26 1.2E-30 216.1 26.3 297 56-382 77-417 (424)
120 PRK07568 aspartate aminotransf 100.0 1.3E-25 2.7E-30 212.2 28.3 297 46-384 59-393 (397)
121 PRK14807 histidinol-phosphate 100.0 7.5E-26 1.6E-30 209.8 26.1 274 57-381 61-350 (351)
122 cd06454 KBL_like KBL_like; thi 99.9 7.2E-26 1.6E-30 210.4 25.9 324 12-384 2-348 (349)
123 TIGR03542 DAPAT_plant LL-diami 99.9 6.9E-26 1.5E-30 213.8 25.6 289 47-380 69-401 (402)
124 PRK06836 aspartate aminotransf 99.9 2.2E-25 4.8E-30 209.9 28.6 290 46-384 66-392 (394)
125 PRK04870 histidinol-phosphate 99.9 1.1E-26 2.3E-31 216.2 19.3 282 46-381 57-356 (356)
126 PRK01533 histidinol-phosphate 99.9 4.9E-26 1.1E-30 211.5 23.6 267 58-383 67-355 (366)
127 PRK03158 histidinol-phosphate 99.9 3.4E-26 7.3E-31 213.1 22.2 273 56-380 65-358 (359)
128 TIGR01140 L_thr_O3P_dcar L-thr 99.9 7E-26 1.5E-30 208.1 24.0 262 53-368 45-319 (330)
129 PRK02610 histidinol-phosphate 99.9 6.7E-26 1.5E-30 211.9 24.0 284 47-384 61-372 (374)
130 PRK05664 threonine-phosphate d 99.9 1.2E-25 2.5E-30 206.6 24.9 265 58-383 52-328 (330)
131 TIGR01977 am_tr_V_EF2568 cyste 99.9 1E-25 2.2E-30 211.5 24.9 298 55-383 44-375 (376)
132 TIGR01979 sufS cysteine desulf 99.9 1.6E-25 3.4E-30 212.0 25.8 298 56-383 63-401 (403)
133 PRK06939 2-amino-3-ketobutyrat 99.9 2.1E-25 4.5E-30 210.9 26.5 286 53-385 84-395 (397)
134 PRK07865 N-succinyldiaminopime 99.9 3.5E-25 7.5E-30 206.6 27.5 268 47-367 56-350 (364)
135 PRK09105 putative aminotransfe 99.9 7.9E-26 1.7E-30 210.6 23.1 270 57-381 80-368 (370)
136 PLN02483 serine palmitoyltrans 99.9 2.5E-25 5.4E-30 213.3 26.7 327 8-384 97-467 (489)
137 COG0156 BioF 7-keto-8-aminopel 99.9 2.8E-25 6.1E-30 202.3 25.6 323 11-384 39-387 (388)
138 PLN03227 serine palmitoyltrans 99.9 2.9E-25 6.3E-30 207.8 26.4 333 14-383 1-382 (392)
139 TIGR00858 bioF 8-amino-7-oxono 99.9 4.9E-25 1.1E-29 205.6 27.5 321 11-381 16-359 (360)
140 TIGR03402 FeS_nifS cysteine de 99.9 3.2E-25 6.9E-30 208.1 26.4 304 56-382 43-371 (379)
141 PRK03317 histidinol-phosphate 99.9 3.4E-26 7.4E-31 213.7 19.5 282 46-383 59-364 (368)
142 PRK04781 histidinol-phosphate 99.9 2.5E-25 5.4E-30 207.0 25.2 278 55-382 59-362 (364)
143 PTZ00376 aspartate aminotransf 99.9 1.3E-25 2.9E-30 211.9 23.6 200 44-248 63-304 (404)
144 PRK13392 5-aminolevulinate syn 99.9 4E-25 8.6E-30 209.3 25.9 325 12-385 47-399 (410)
145 TIGR03539 DapC_actino succinyl 99.9 1.7E-24 3.7E-29 201.2 29.6 269 46-367 49-344 (357)
146 TIGR01141 hisC histidinol-phos 99.9 1.5E-25 3.1E-30 207.9 22.3 271 58-381 57-345 (346)
147 cd06453 SufS_like Cysteine des 99.9 3.5E-25 7.5E-30 207.6 25.0 291 56-381 44-373 (373)
148 PRK05387 histidinol-phosphate 99.9 3.4E-25 7.4E-30 206.0 24.7 273 58-383 63-353 (353)
149 TIGR03403 nifS_epsilon cystein 99.9 1.8E-25 3.9E-30 209.9 22.9 299 60-381 47-369 (382)
150 TIGR02539 SepCysS Sep-tRNA:Cys 99.9 6E-25 1.3E-29 205.1 26.2 280 55-384 51-369 (370)
151 PRK08153 histidinol-phosphate 99.9 4.2E-25 9.1E-30 206.0 25.0 282 48-383 63-365 (369)
152 PRK05166 histidinol-phosphate 99.9 7.6E-25 1.7E-29 204.6 26.7 273 59-382 75-370 (371)
153 TIGR01976 am_tr_V_VC1184 cyste 99.9 1.6E-25 3.4E-30 211.6 22.2 296 56-381 61-397 (397)
154 PRK01688 histidinol-phosphate 99.9 7.4E-26 1.6E-30 209.7 19.4 272 54-377 56-350 (351)
155 PRK07392 threonine-phosphate d 99.9 6.9E-25 1.5E-29 204.2 25.7 282 47-382 52-358 (360)
156 PRK08354 putative aminotransfe 99.9 1.7E-24 3.7E-29 197.3 27.3 263 57-381 42-310 (311)
157 cd06452 SepCysS Sep-tRNA:Cys-t 99.9 6.3E-25 1.4E-29 204.6 24.9 166 53-225 42-223 (361)
158 PRK13393 5-aminolevulinate syn 99.9 1.1E-24 2.4E-29 205.9 26.8 325 11-385 45-398 (406)
159 PLN02651 cysteine desulfurase 99.9 5.3E-25 1.2E-29 205.2 24.3 293 56-374 44-363 (364)
160 TIGR01821 5aminolev_synth 5-am 99.9 9E-25 1.9E-29 206.5 26.1 326 11-385 45-398 (402)
161 PRK06959 putative threonine-ph 99.9 5.2E-25 1.1E-29 202.7 23.7 264 58-384 56-334 (339)
162 PLN02955 8-amino-7-oxononanoat 99.9 2.2E-24 4.7E-29 201.0 27.2 322 7-382 98-456 (476)
163 TIGR03576 pyridox_MJ0158 pyrid 99.9 1.2E-24 2.6E-29 199.8 25.1 298 20-382 27-346 (346)
164 TIGR01825 gly_Cac_T_rel pyrido 99.9 1.4E-24 3.1E-29 204.3 26.3 326 11-385 33-383 (385)
165 PRK09440 avtA valine--pyruvate 99.9 1.2E-24 2.7E-29 206.5 26.0 306 46-384 67-412 (416)
166 PF00155 Aminotran_1_2: Aminot 99.9 2.5E-26 5.3E-31 214.6 14.1 282 44-376 35-362 (363)
167 PLN02368 alanine transaminase 99.9 2.5E-25 5.4E-30 208.4 20.6 199 45-248 99-340 (407)
168 PRK04635 histidinol-phosphate 99.9 1.8E-25 4E-30 207.5 19.5 270 56-379 61-351 (354)
169 PRK05958 8-amino-7-oxononanoat 99.9 4.4E-24 9.5E-29 201.1 28.2 323 11-383 39-383 (385)
170 cd06451 AGAT_like Alanine-glyo 99.9 1.5E-24 3.2E-29 202.0 24.6 165 55-224 32-207 (356)
171 PLN02397 aspartate transaminas 99.9 1.1E-24 2.4E-29 206.2 23.6 283 46-383 84-421 (423)
172 PRK03321 putative aminotransfe 99.9 6.9E-25 1.5E-29 203.8 21.6 271 56-382 58-350 (352)
173 PRK14809 histidinol-phosphate 99.9 1.1E-24 2.3E-29 202.8 22.5 309 11-382 30-356 (357)
174 TIGR02006 IscS cysteine desulf 99.9 3.7E-24 7.9E-29 202.1 26.2 160 56-219 48-220 (402)
175 PLN02409 serine--glyoxylate am 99.9 1.3E-24 2.8E-29 204.6 23.0 161 55-219 42-218 (401)
176 PRK09331 Sep-tRNA:Cys-tRNA syn 99.9 2.3E-24 5.1E-29 202.2 24.6 159 54-218 62-236 (387)
177 PRK07908 hypothetical protein; 99.9 5E-24 1.1E-28 197.6 26.2 278 47-384 52-348 (349)
178 PRK02948 cysteine desulfurase; 99.9 3.7E-24 7.9E-29 201.1 25.5 300 56-382 44-373 (381)
179 PRK09064 5-aminolevulinate syn 99.9 5.2E-24 1.1E-28 201.7 26.4 324 11-385 46-399 (407)
180 PRK09257 aromatic amino acid a 99.9 2.5E-24 5.5E-29 202.9 23.9 166 45-215 61-260 (396)
181 PRK03967 histidinol-phosphate 99.9 1.1E-24 2.4E-29 200.6 20.8 271 47-384 50-335 (337)
182 PF00266 Aminotran_5: Aminotra 99.9 2E-24 4.2E-29 202.1 21.6 289 55-377 43-371 (371)
183 cd00609 AAT_like Aspartate ami 99.9 1.4E-23 3E-28 194.9 27.1 292 46-382 29-349 (350)
184 PRK09275 aspartate aminotransf 99.9 8E-24 1.7E-28 201.5 25.5 168 48-218 129-328 (527)
185 KOG1549 Cysteine desulfurase N 99.9 6.5E-25 1.4E-29 197.0 16.6 200 12-217 43-257 (428)
186 PRK14808 histidinol-phosphate 99.9 1.1E-24 2.4E-29 200.3 18.5 268 49-379 53-333 (335)
187 PRK08637 hypothetical protein; 99.9 1.2E-22 2.5E-27 191.0 30.2 296 43-384 34-387 (388)
188 PLN02672 methionine S-methyltr 99.9 2.1E-23 4.6E-28 210.2 26.6 283 53-382 731-1079(1082)
189 PLN02721 threonine aldolase 99.9 2.8E-23 6.1E-28 193.3 25.6 281 55-383 40-352 (353)
190 KOG0256 1-aminocyclopropane-1- 99.9 9.9E-23 2.1E-27 179.2 27.2 297 47-382 115-460 (471)
191 TIGR03801 asp_4_decarbox aspar 99.9 4.3E-23 9.3E-28 196.2 26.0 169 48-219 123-328 (521)
192 TIGR02326 transamin_PhnW 2-ami 99.9 1.7E-23 3.6E-28 195.3 22.7 282 56-382 36-361 (363)
193 cd00616 AHBA_syn 3-amino-5-hyd 99.9 5.3E-23 1.2E-27 191.3 25.6 300 54-382 17-352 (352)
194 TIGR02379 ECA_wecE TDP-4-keto- 99.9 1.1E-22 2.3E-27 189.2 26.9 257 55-329 31-320 (376)
195 PLN02822 serine palmitoyltrans 99.9 5.3E-23 1.2E-27 196.8 25.4 325 11-383 109-477 (481)
196 TIGR01437 selA_rel uncharacter 99.9 7.9E-23 1.7E-27 189.6 25.5 166 55-225 45-230 (363)
197 PRK14012 cysteine desulfurase; 99.9 6E-23 1.3E-27 194.1 24.9 160 56-219 50-222 (404)
198 TIGR03235 DNA_S_dndA cysteine 99.9 4.7E-23 1E-27 191.6 23.6 159 56-218 43-215 (353)
199 PRK13479 2-aminoethylphosphona 99.9 8.7E-23 1.9E-27 190.9 24.6 286 56-385 38-365 (368)
200 PRK05937 8-amino-7-oxononanoat 99.9 1.7E-22 3.6E-27 188.6 23.9 319 10-384 3-351 (370)
201 cd00613 GDC-P Glycine cleavage 99.9 4.1E-22 8.8E-27 188.4 25.9 164 53-218 61-241 (398)
202 TIGR00474 selA seryl-tRNA(sec) 99.9 1.4E-22 3.1E-27 190.5 22.4 213 55-271 122-371 (454)
203 TIGR03588 PseC UDP-4-keto-6-de 99.9 8.1E-22 1.8E-26 184.9 26.8 300 55-383 29-378 (380)
204 cd06502 TA_like Low-specificit 99.9 4E-22 8.7E-27 184.4 24.4 278 54-383 31-337 (338)
205 COG0399 WecE Predicted pyridox 99.9 6.7E-22 1.4E-26 178.9 23.6 303 54-383 33-373 (374)
206 TIGR03301 PhnW-AepZ 2-aminoeth 99.9 7.2E-22 1.6E-26 183.9 24.7 161 55-219 31-204 (355)
207 PRK11658 UDP-4-amino-4-deoxy-L 99.9 5.2E-21 1.1E-25 178.7 28.6 253 54-328 32-322 (379)
208 cd00378 SHMT Serine-glycine hy 99.9 3.2E-21 6.8E-26 182.5 27.1 286 58-383 68-385 (402)
209 PRK04311 selenocysteine syntha 99.9 1.6E-21 3.4E-26 184.0 23.4 212 56-272 128-377 (464)
210 PRK11706 TDP-4-oxo-6-deoxy-D-g 99.9 2E-20 4.3E-25 174.8 30.7 256 55-329 31-319 (375)
211 PRK00011 glyA serine hydroxyme 99.9 1.5E-21 3.2E-26 185.5 23.0 283 61-383 77-389 (416)
212 PRK13238 tnaA tryptophanase/L- 99.9 4.1E-21 9E-26 182.2 25.8 174 44-227 69-284 (460)
213 cd06450 DOPA_deC_like DOPA dec 99.9 3.4E-22 7.3E-27 185.4 18.0 270 48-383 29-344 (345)
214 PLN02724 Molybdenum cofactor s 99.9 1.2E-21 2.6E-26 198.4 22.9 160 56-218 79-278 (805)
215 TIGR01814 kynureninase kynuren 99.9 1.8E-21 3.9E-26 184.0 22.1 156 57-216 73-247 (406)
216 PF01041 DegT_DnrJ_EryC1: DegT 99.9 2.7E-21 5.8E-26 179.9 22.7 304 54-382 24-363 (363)
217 TIGR00707 argD acetylornithine 99.9 4.7E-21 1E-25 180.0 24.1 292 11-328 27-349 (379)
218 PRK13034 serine hydroxymethylt 99.9 1.9E-21 4.1E-26 183.4 21.1 327 10-382 27-391 (416)
219 TIGR03812 tyr_de_CO2_Arch tyro 99.9 9.7E-21 2.1E-25 177.5 25.1 276 55-383 59-372 (373)
220 KOG0634 Aromatic amino acid am 99.9 3.5E-21 7.6E-26 170.9 19.9 302 45-383 92-466 (472)
221 PRK13520 L-tyrosine decarboxyl 99.9 1.5E-20 3.2E-25 176.2 24.6 163 56-224 60-242 (371)
222 PRK10534 L-threonine aldolase; 99.9 7.7E-21 1.7E-25 175.3 22.1 273 53-382 32-332 (333)
223 PRK00854 rocD ornithine--oxo-a 99.9 2.4E-20 5.1E-25 176.4 25.9 282 54-382 82-400 (401)
224 COG0075 Serine-pyruvate aminot 99.9 5E-20 1.1E-24 166.5 25.7 288 55-385 38-365 (383)
225 PRK01278 argD acetylornithine 99.9 6.5E-21 1.4E-25 179.4 20.2 320 12-383 32-388 (389)
226 PRK03244 argD acetylornithine 99.9 1.1E-20 2.4E-25 178.5 21.1 283 53-384 83-395 (398)
227 PRK15407 lipopolysaccharide bi 99.9 1.5E-19 3.3E-24 170.9 28.7 253 55-328 63-376 (438)
228 PRK02627 acetylornithine amino 99.9 1.3E-20 2.8E-25 178.0 19.7 284 53-384 79-395 (396)
229 PRK07505 hypothetical protein; 99.9 1.4E-19 3.1E-24 170.9 26.3 321 11-384 46-400 (402)
230 cd00617 Tnase_like Tryptophana 99.9 1.4E-19 3E-24 169.5 25.7 295 47-383 47-408 (431)
231 cd00610 OAT_like Acetyl ornith 99.9 2.4E-20 5.1E-25 177.3 20.6 321 11-382 36-410 (413)
232 PRK04073 rocD ornithine--oxo-a 99.9 7.6E-20 1.7E-24 172.3 21.7 306 21-381 52-395 (396)
233 PRK00451 glycine dehydrogenase 99.9 8.5E-20 1.8E-24 174.9 21.7 156 58-218 115-285 (447)
234 PRK02936 argD acetylornithine 99.8 1.7E-19 3.8E-24 169.1 21.4 315 12-380 30-376 (377)
235 PRK04366 glycine dehydrogenase 99.8 3.2E-19 6.9E-24 171.2 22.9 161 53-218 110-292 (481)
236 TIGR03246 arg_catab_astC succi 99.8 3.9E-19 8.4E-24 167.3 23.0 321 11-383 35-395 (397)
237 KOG1359 Glycine C-acetyltransf 99.8 3.3E-20 7.1E-25 156.5 13.7 325 7-383 63-412 (417)
238 cd00615 Orn_deC_like Ornithine 99.8 5.1E-20 1.1E-24 166.4 15.9 156 56-218 60-236 (294)
239 PRK05093 argD bifunctional N-s 99.8 1.9E-19 4E-24 170.1 19.8 320 12-383 41-400 (403)
240 PRK13580 serine hydroxymethylt 99.8 1.7E-18 3.7E-23 161.9 24.7 283 60-383 100-445 (493)
241 PTZ00125 ornithine aminotransf 99.8 2.3E-19 5E-24 169.7 19.1 288 54-384 72-396 (400)
242 PTZ00094 serine hydroxymethylt 99.8 7.5E-19 1.6E-23 167.9 21.9 153 60-218 85-260 (452)
243 COG3977 Alanine-alpha-ketoisov 99.8 1.1E-18 2.4E-23 147.8 20.3 298 48-384 69-412 (417)
244 PRK12381 bifunctional succinyl 99.8 9.4E-19 2E-23 165.2 20.9 321 12-383 40-399 (406)
245 PRK03080 phosphoserine aminotr 99.8 9.9E-19 2.1E-23 163.4 20.0 152 55-220 48-212 (378)
246 COG1103 Archaea-specific pyrid 99.8 4.5E-18 9.7E-23 142.2 20.9 281 55-384 61-381 (382)
247 COG4992 ArgD Ornithine/acetylo 99.8 2.5E-19 5.5E-24 160.4 14.4 313 20-384 53-399 (404)
248 TIGR01788 Glu-decarb-GAD gluta 99.8 2.8E-18 6E-23 161.1 22.1 287 55-384 80-430 (431)
249 cd01494 AAT_I Aspartate aminot 99.8 2E-18 4.3E-23 143.1 16.7 154 57-216 2-170 (170)
250 PRK02769 histidine decarboxyla 99.8 1.7E-17 3.6E-22 153.9 24.3 159 56-220 66-249 (380)
251 PLN02414 glycine dehydrogenase 99.8 1.6E-17 3.4E-22 167.8 25.1 158 56-217 569-749 (993)
252 KOG0633 Histidinol phosphate a 99.8 1.2E-17 2.6E-22 138.9 19.5 264 72-381 87-375 (375)
253 KOG1368 Threonine aldolase [Am 99.8 1E-17 2.2E-22 141.9 18.8 279 55-381 56-362 (384)
254 COG2008 GLY1 Threonine aldolas 99.8 5.2E-17 1.1E-21 142.8 22.9 232 55-309 35-292 (342)
255 PLN03032 serine decarboxylase; 99.8 9E-17 1.9E-21 147.9 24.6 209 56-271 67-314 (374)
256 PLN02624 ornithine-delta-amino 99.8 1.4E-17 3.1E-22 159.4 19.4 316 22-383 88-444 (474)
257 TIGR03531 selenium_SpcS O-phos 99.8 6.1E-17 1.3E-21 151.4 22.6 210 56-271 106-344 (444)
258 PLN00144 acetylornithine trans 99.8 1.2E-17 2.6E-22 156.0 17.9 316 20-385 26-382 (382)
259 KOG1360 5-aminolevulinate synt 99.8 2.6E-17 5.7E-22 144.6 18.2 319 11-383 171-520 (570)
260 TIGR01364 serC_1 phosphoserine 99.8 3.5E-17 7.6E-22 150.7 19.2 274 55-382 37-347 (349)
261 cd00611 PSAT_like Phosphoserin 99.8 2.7E-17 5.9E-22 152.5 17.8 274 55-383 44-352 (355)
262 PLN02271 serine hydroxymethylt 99.8 1E-15 2.2E-20 143.9 28.0 214 53-272 188-455 (586)
263 TIGR01885 Orn_aminotrans ornit 99.8 5.3E-16 1.1E-20 146.6 25.2 283 53-381 77-400 (401)
264 PRK03715 argD acetylornithine 99.7 1.8E-16 3.9E-21 148.6 21.2 321 12-383 37-393 (395)
265 PRK05355 3-phosphoserine/phosp 99.7 1.1E-16 2.3E-21 148.2 19.0 274 55-382 48-357 (360)
266 TIGR01366 serC_3 phosphoserine 99.7 9.1E-17 2E-21 149.0 18.2 158 55-220 41-203 (361)
267 TIGR02618 tyr_phenol_ly tyrosi 99.7 9.9E-16 2.1E-20 141.4 24.6 292 53-383 69-426 (450)
268 PRK13237 tyrosine phenol-lyase 99.7 4.2E-15 9.1E-20 137.7 25.9 301 53-383 76-433 (460)
269 PF01276 OKR_DC_1: Orn/Lys/Arg 99.7 1.5E-16 3.2E-21 146.4 15.7 157 56-219 67-257 (417)
270 PLN03226 serine hydroxymethylt 99.7 5.4E-15 1.2E-19 140.9 26.2 289 53-382 74-418 (475)
271 PRK08088 4-aminobutyrate amino 99.7 3.8E-16 8.3E-21 148.3 18.4 289 53-384 82-424 (425)
272 TIGR00713 hemL glutamate-1-sem 99.7 8.8E-16 1.9E-20 146.1 20.8 311 21-384 60-423 (423)
273 PRK08117 4-aminobutyrate amino 99.7 2.1E-16 4.6E-21 150.4 16.5 319 20-384 54-430 (433)
274 PRK04612 argD acetylornithine 99.7 5.9E-16 1.3E-20 145.5 19.0 286 54-383 81-403 (408)
275 COG0112 GlyA Glycine/serine hy 99.7 4.8E-15 1E-19 131.3 23.1 206 60-272 77-304 (413)
276 PRK09792 4-aminobutyrate trans 99.7 4.8E-16 1.1E-20 147.0 18.1 318 20-382 51-420 (421)
277 PLN02880 tyrosine decarboxylas 99.7 2.1E-15 4.5E-20 144.5 22.4 159 55-219 122-324 (490)
278 KOG2862 Alanine-glyoxylate ami 99.7 1.9E-15 4E-20 129.1 18.9 161 56-220 51-223 (385)
279 PLN02590 probable tyrosine dec 99.7 1.5E-15 3.2E-20 145.5 20.7 284 55-384 170-533 (539)
280 TIGR00700 GABAtrnsam 4-aminobu 99.7 7.2E-16 1.6E-20 146.1 17.7 318 20-382 44-419 (420)
281 PRK04260 acetylornithine amino 99.7 3.4E-15 7.4E-20 139.8 21.8 233 73-327 87-344 (375)
282 PRK05367 glycine dehydrogenase 99.7 2.5E-15 5.5E-20 152.7 21.9 158 56-217 543-723 (954)
283 PRK04013 argD acetylornithine/ 99.7 1.3E-15 2.8E-20 140.5 18.1 302 20-384 35-361 (364)
284 TIGR03799 NOD_PanD_pyr putativ 99.7 8.6E-15 1.9E-19 140.5 24.1 214 54-273 128-421 (522)
285 PRK06777 4-aminobutyrate amino 99.7 1.1E-15 2.5E-20 144.5 18.0 315 21-382 52-420 (421)
286 TIGR03372 putres_am_tran putre 99.7 4.3E-15 9.4E-20 140.3 21.4 287 20-327 86-409 (442)
287 PRK05964 adenosylmethionine--8 99.7 2.3E-15 4.9E-20 142.9 19.2 283 54-383 84-422 (423)
288 TIGR02407 ectoine_ectB diamino 99.7 2E-15 4.3E-20 142.5 17.9 319 20-382 46-411 (412)
289 COG0160 GabT 4-aminobutyrate a 99.7 1.9E-15 4.2E-20 139.6 17.3 318 20-384 67-446 (447)
290 PRK11522 putrescine--2-oxoglut 99.7 1.9E-15 4.2E-20 143.7 17.8 319 20-384 93-452 (459)
291 PRK07495 4-aminobutyrate amino 99.7 1.6E-15 3.5E-20 143.3 16.9 290 53-384 81-422 (425)
292 TIGR00461 gcvP glycine dehydro 99.7 2E-14 4.3E-19 143.9 24.7 156 56-218 531-712 (939)
293 PRK12566 glycine dehydrogenase 99.7 8.6E-15 1.9E-19 145.5 21.9 151 53-207 540-711 (954)
294 PRK05367 glycine dehydrogenase 99.7 1.4E-14 3.1E-19 147.2 22.7 157 56-222 122-290 (954)
295 PRK08360 4-aminobutyrate amino 99.7 1.3E-14 2.8E-19 137.8 20.9 313 20-383 52-426 (443)
296 PRK06058 4-aminobutyrate amino 99.7 1E-14 2.2E-19 139.0 20.3 288 54-383 98-442 (443)
297 PF00464 SHMT: Serine hydroxym 99.6 2.3E-13 5E-18 124.9 27.3 206 60-272 71-320 (399)
298 PRK06918 4-aminobutyrate amino 99.6 7.7E-15 1.7E-19 140.2 18.5 288 54-383 96-443 (451)
299 KOG1357 Serine palmitoyltransf 99.6 7.4E-16 1.6E-20 137.8 10.4 285 53-384 179-499 (519)
300 COG3844 Kynureninase [Amino ac 99.6 5E-14 1.1E-18 121.3 21.0 287 56-384 77-403 (407)
301 PF06838 Met_gamma_lyase: Meth 99.6 7.5E-14 1.6E-18 122.9 22.6 253 56-323 55-334 (403)
302 PLN02263 serine decarboxylase 99.6 2.2E-13 4.8E-18 127.5 26.4 209 56-271 134-381 (470)
303 PRK00062 glutamate-1-semialdeh 99.6 1.5E-14 3.3E-19 137.3 18.6 321 12-384 51-425 (426)
304 KOG0258 Alanine aminotransfera 99.6 1.2E-14 2.6E-19 127.8 16.3 166 47-216 107-312 (475)
305 PLN02414 glycine dehydrogenase 99.6 4.1E-14 8.9E-19 143.3 22.6 154 56-218 149-315 (993)
306 COG0076 GadB Glutamate decarbo 99.6 1.9E-14 4.2E-19 135.6 18.7 211 56-272 102-362 (460)
307 PRK09264 diaminobutyrate--2-ox 99.6 1.8E-14 3.8E-19 136.7 18.5 320 20-383 50-416 (425)
308 PRK07986 adenosylmethionine--8 99.6 1.7E-14 3.7E-19 136.1 16.6 284 54-383 85-423 (428)
309 PRK15029 arginine decarboxylas 99.6 2.4E-14 5.2E-19 141.2 17.9 156 56-218 206-402 (755)
310 COG0001 HemL Glutamate-1-semia 99.6 4.7E-14 1E-18 128.1 17.6 255 57-330 95-400 (432)
311 PRK05630 adenosylmethionine--8 99.6 5.1E-14 1.1E-18 132.9 18.3 283 54-383 82-420 (422)
312 PRK08593 4-aminobutyrate amino 99.6 7.9E-14 1.7E-18 132.6 19.7 312 20-383 53-429 (445)
313 PRK06541 hypothetical protein; 99.6 1.2E-13 2.5E-18 131.8 20.6 287 54-383 94-455 (460)
314 PRK06173 adenosylmethionine--8 99.6 4.6E-14 9.9E-19 133.4 17.6 282 55-383 87-425 (429)
315 PLN02760 4-aminobutyrate:pyruv 99.6 1.1E-13 2.5E-18 132.8 19.8 323 12-384 90-492 (504)
316 PF12897 Aminotran_MocR: Alani 99.6 6.8E-14 1.5E-18 123.9 16.6 291 56-377 70-406 (425)
317 PF01212 Beta_elim_lyase: Beta 99.6 1.9E-15 4E-20 134.6 6.7 215 53-272 27-271 (290)
318 TIGR00709 dat 2,4-diaminobutyr 99.6 1.4E-13 3E-18 131.1 18.7 317 20-383 50-435 (442)
319 PRK13578 ornithine decarboxyla 99.6 2.1E-13 4.6E-18 133.3 20.0 156 56-218 175-371 (720)
320 PRK13360 omega amino acid--pyr 99.6 2.4E-13 5.1E-18 129.2 19.3 286 54-384 88-441 (442)
321 PRK12403 putative aminotransfe 99.6 5.8E-13 1.3E-17 127.2 21.7 283 54-384 97-453 (460)
322 PRK05639 4-aminobutyrate amino 99.6 3.3E-13 7.1E-18 128.5 19.9 285 55-383 96-443 (457)
323 PF03841 SelA: L-seryl-tRNA se 99.6 7.9E-15 1.7E-19 130.6 7.4 165 57-226 49-235 (367)
324 PRK05769 4-aminobutyrate amino 99.5 3.2E-13 7E-18 128.3 18.5 285 54-384 96-440 (441)
325 PRK06943 adenosylmethionine--8 99.5 4.1E-13 8.8E-18 127.9 19.1 285 54-384 96-447 (453)
326 COG1448 TyrB Aspartate/tyrosin 99.5 4.3E-13 9.4E-18 118.7 17.5 301 8-324 23-370 (396)
327 PRK07678 aminotransferase; Val 99.5 7E-13 1.5E-17 126.4 20.5 295 53-384 87-450 (451)
328 PRK09221 beta alanine--pyruvat 99.5 6.4E-13 1.4E-17 126.3 19.9 286 54-384 91-444 (445)
329 PRK06149 hypothetical protein; 99.5 5.8E-13 1.3E-17 138.0 20.9 326 12-384 586-971 (972)
330 PRK07046 aminotransferase; Val 99.5 1.2E-12 2.6E-17 124.6 20.7 282 56-384 116-451 (453)
331 TIGR01365 serC_2 phosphoserine 99.5 1.7E-12 3.6E-17 119.8 20.9 275 55-380 39-370 (374)
332 PRK07481 hypothetical protein; 99.5 5.6E-13 1.2E-17 127.0 18.2 286 54-385 85-447 (449)
333 PRK07482 hypothetical protein; 99.5 5.3E-13 1.1E-17 127.5 17.5 288 53-383 92-454 (461)
334 PLN02452 phosphoserine transam 99.5 7.2E-13 1.6E-17 122.2 17.7 275 55-383 52-363 (365)
335 PRK06938 diaminobutyrate--2-ox 99.5 7.5E-13 1.6E-17 126.3 18.4 288 54-384 105-461 (464)
336 TIGR00508 bioA adenosylmethion 99.5 8.6E-13 1.9E-17 125.0 18.7 279 57-383 90-426 (427)
337 PRK07030 adenosylmethionine--8 99.5 5.6E-13 1.2E-17 127.2 17.4 284 54-384 89-447 (466)
338 PRK05965 hypothetical protein; 99.5 2.3E-12 4.9E-17 123.1 21.2 286 54-384 89-448 (459)
339 PRK06062 hypothetical protein; 99.5 3.6E-13 7.9E-18 128.2 15.7 283 53-384 93-446 (451)
340 PRK06105 aminotransferase; Pro 99.5 3.8E-12 8.3E-17 121.6 22.6 285 54-383 91-449 (460)
341 KOG1402 Ornithine aminotransfe 99.5 1.8E-12 3.8E-17 111.9 17.9 284 56-382 102-426 (427)
342 PRK08742 adenosylmethionine--8 99.5 6.6E-13 1.4E-17 126.7 17.0 285 54-384 106-468 (472)
343 PRK12389 glutamate-1-semialdeh 99.5 5.2E-12 1.1E-16 119.9 22.4 285 55-383 93-427 (428)
344 PF00282 Pyridoxal_deC: Pyrido 99.5 1.1E-12 2.3E-17 121.7 17.3 212 56-273 80-356 (373)
345 PLN02482 glutamate-1-semialdeh 99.5 1.6E-12 3.5E-17 123.8 18.4 284 55-383 139-473 (474)
346 PRK06082 4-aminobutyrate amino 99.5 4.4E-12 9.5E-17 121.0 19.6 287 53-383 111-451 (459)
347 PRK06916 adenosylmethionine--8 99.5 2.9E-12 6.2E-17 122.4 18.3 286 54-385 98-457 (460)
348 COG1921 SelA Selenocysteine sy 99.5 1.4E-12 3E-17 117.3 14.6 181 57-246 70-265 (395)
349 PRK06931 diaminobutyrate--2-ox 99.5 4.3E-12 9.3E-17 121.1 18.5 288 53-383 99-454 (459)
350 PRK07036 hypothetical protein; 99.5 1.9E-11 4.1E-16 116.9 22.9 283 55-383 95-452 (466)
351 PRK00615 glutamate-1-semialdeh 99.5 1.3E-11 2.7E-16 116.8 20.9 285 55-384 93-429 (433)
352 PF04864 Alliinase_C: Allinase 99.4 4.6E-13 1E-17 117.1 10.1 284 55-379 43-361 (363)
353 PRK06917 hypothetical protein; 99.4 5.3E-12 1.2E-16 120.1 18.3 323 20-383 42-437 (447)
354 PRK15400 lysine decarboxylase 99.4 8E-12 1.7E-16 122.3 19.8 153 56-217 196-382 (714)
355 PRK15399 lysine decarboxylase 99.4 3E-11 6.5E-16 118.3 23.5 153 56-218 196-383 (713)
356 PRK07483 hypothetical protein; 99.4 3E-12 6.4E-17 121.7 15.8 324 20-384 41-438 (443)
357 COG0161 BioA Adenosylmethionin 99.4 4.8E-12 1E-16 116.6 16.4 290 53-384 86-444 (449)
358 COG0403 GcvP Glycine cleavage 99.4 1.1E-10 2.4E-15 104.8 24.4 198 12-218 75-292 (450)
359 PRK06148 hypothetical protein; 99.4 9.2E-12 2E-16 129.2 20.1 290 53-384 661-1011(1013)
360 PRK07480 putative aminotransfe 99.4 5.2E-11 1.1E-15 113.6 21.7 284 54-384 93-449 (456)
361 TIGR00461 gcvP glycine dehydro 99.4 3E-11 6.5E-16 121.4 20.6 154 56-218 110-275 (939)
362 COG1982 LdcC Arginine/lysine/o 99.4 3.9E-11 8.5E-16 112.9 19.7 155 56-217 71-247 (557)
363 KOG1358 Serine palmitoyltransf 99.4 4.9E-12 1.1E-16 111.6 12.7 179 56-242 140-343 (467)
364 PRK12462 phosphoserine aminotr 99.4 2.4E-10 5.2E-15 104.5 23.0 275 56-383 50-362 (364)
365 TIGR02617 tnaA_trp_ase tryptop 99.4 6.9E-11 1.5E-15 108.6 18.4 305 53-383 72-441 (467)
366 PRK08297 L-lysine aminotransfe 99.3 1.5E-10 3.2E-15 110.2 21.2 317 20-384 56-442 (443)
367 TIGR03251 LAT_fam L-lysine 6-t 99.3 4E-10 8.6E-15 107.1 23.6 281 54-383 84-430 (431)
368 PF02347 GDC-P: Glycine cleava 99.3 1.1E-09 2.3E-14 101.4 24.1 157 56-218 111-278 (429)
369 COG1003 GcvP Glycine cleavage 99.3 2.3E-11 4.9E-16 109.1 12.7 147 56-207 110-274 (496)
370 TIGR00699 GABAtrns_euk 4-amino 99.3 1.3E-10 2.9E-15 110.2 17.3 179 129-327 238-433 (464)
371 COG4100 Cystathionine beta-lya 99.3 4.9E-10 1.1E-14 95.8 17.8 251 56-321 66-343 (416)
372 PF00202 Aminotran_3: Aminotra 99.3 1.7E-10 3.7E-15 106.1 15.4 222 20-250 27-293 (339)
373 KOG1404 Alanine-glyoxylate ami 99.2 1E-09 2.2E-14 97.3 18.5 177 138-331 211-407 (442)
374 TIGR03811 tyr_de_CO2_Ent tyros 99.2 1.4E-09 3E-14 105.8 19.2 212 54-271 122-475 (608)
375 PLN02974 adenosylmethionine-8- 99.2 6.7E-10 1.4E-14 111.7 16.3 176 138-328 583-787 (817)
376 PRK06209 glutamate-1-semialdeh 99.2 2E-09 4.3E-14 102.4 18.8 161 57-223 90-271 (431)
377 KOG1383 Glutamate decarboxylas 99.1 6.4E-09 1.4E-13 94.5 16.4 277 56-384 121-447 (491)
378 PRK12566 glycine dehydrogenase 99.1 8.2E-09 1.8E-13 103.6 18.4 190 13-218 80-289 (954)
379 KOG1412 Aspartate aminotransfe 99.0 1.4E-07 2.9E-12 81.5 22.2 291 46-384 67-406 (410)
380 KOG2467 Glycine/serine hydroxy 99.0 2.3E-07 4.9E-12 81.9 23.2 283 53-382 80-425 (477)
381 KOG1401 Acetylornithine aminot 99.0 8.4E-08 1.8E-12 86.0 19.2 194 70-269 116-346 (433)
382 PF05889 SLA_LP_auto_ag: Solub 98.9 4.4E-08 9.5E-13 88.6 16.3 153 66-224 67-245 (389)
383 KOG1411 Aspartate aminotransfe 98.9 1.1E-07 2.3E-12 83.3 15.0 237 75-321 125-394 (427)
384 KOG0629 Glutamate decarboxylas 98.8 3.4E-07 7.3E-12 82.4 14.8 228 41-274 125-416 (510)
385 KOG0628 Aromatic-L-amino-acid/ 98.7 1.1E-06 2.3E-11 80.1 17.7 253 48-323 102-429 (511)
386 KOG2040 Glycine dehydrogenase 98.7 7.1E-07 1.5E-11 84.3 16.9 149 53-206 579-749 (1001)
387 COG3033 TnaA Tryptophanase [Am 98.7 1.9E-06 4E-11 76.2 18.4 213 53-271 77-346 (471)
388 KOG3846 L-kynurenine hydrolase 98.6 1.6E-06 3.4E-11 75.0 13.5 157 60-216 116-292 (465)
389 KOG1405 4-aminobutyrate aminot 98.5 1.8E-06 3.9E-11 76.0 12.9 204 129-383 255-483 (484)
390 KOG1403 Predicted alanine-glyo 98.4 5.1E-06 1.1E-10 71.6 11.2 283 60-381 92-435 (452)
391 COG1932 SerC Phosphoserine ami 98.4 3.2E-05 6.9E-10 69.1 16.1 273 56-383 51-363 (365)
392 KOG2040 Glycine dehydrogenase 98.1 7.3E-05 1.6E-09 71.2 12.9 182 10-201 116-309 (1001)
393 PLN02994 1-aminocyclopropane-1 97.9 3.4E-05 7.3E-10 61.9 6.2 58 48-105 87-153 (153)
394 KOG3843 Predicted serine hydro 96.0 0.054 1.2E-06 46.6 8.9 166 53-224 51-247 (432)
395 KOG2790 Phosphoserine aminotra 92.9 1.7 3.7E-05 38.1 10.6 150 56-220 53-222 (370)
396 PF05368 NmrA: NmrA-like famil 85.9 4.6 0.0001 34.8 8.2 91 79-174 8-99 (233)
397 PLN02672 methionine S-methyltr 85.2 21 0.00044 38.4 13.5 181 43-225 416-624 (1082)
398 COG1648 CysG Siroheme synthase 80.0 15 0.00032 31.3 8.6 92 72-177 14-106 (210)
399 PF02310 B12-binding: B12 bind 78.4 4.3 9.3E-05 30.8 4.6 88 107-196 17-110 (121)
400 KOG1371 UDP-glucose 4-epimeras 73.6 8.2 0.00018 34.9 5.4 102 73-174 4-124 (343)
401 TIGR00715 precor6x_red precorr 71.0 19 0.00041 31.7 7.2 91 74-173 3-96 (256)
402 TIGR01470 cysG_Nterm siroheme 70.9 48 0.001 28.0 9.5 92 71-177 10-103 (205)
403 PF13460 NAD_binding_10: NADH( 70.3 31 0.00068 28.1 8.2 83 79-170 8-90 (183)
404 COG2102 Predicted ATPases of P 69.3 57 0.0012 27.9 9.2 95 73-174 4-117 (223)
405 COG1606 ATP-utilizing enzymes 68.8 30 0.00066 30.1 7.6 97 72-179 20-123 (269)
406 PRK05096 guanosine 5'-monophos 67.8 99 0.0021 28.4 11.0 123 73-195 98-240 (346)
407 PLN00191 enolase 66.8 48 0.001 32.0 9.4 94 81-176 299-395 (457)
408 PLN02589 caffeoyl-CoA O-methyl 66.7 84 0.0018 27.5 10.2 123 56-183 66-197 (247)
409 TIGR03573 WbuX N-acetyl sugar 66.5 41 0.00088 31.1 8.7 114 58-179 43-170 (343)
410 KOG2865 NADH:ubiquinone oxidor 66.4 46 0.00099 29.8 8.3 97 73-170 62-169 (391)
411 KOG2741 Dimeric dihydrodiol de 66.1 15 0.00034 33.4 5.6 71 102-179 60-132 (351)
412 TIGR03649 ergot_EASG ergot alk 65.0 30 0.00066 30.7 7.5 88 74-170 2-97 (285)
413 PRK08335 translation initiatio 63.1 83 0.0018 28.0 9.6 97 72-174 111-216 (275)
414 PF01596 Methyltransf_3: O-met 63.0 25 0.00055 29.8 6.2 123 55-183 31-162 (205)
415 PRK04296 thymidine kinase; Pro 61.5 42 0.00091 27.9 7.2 92 81-175 18-112 (190)
416 COG1087 GalE UDP-glucose 4-epi 59.4 45 0.00097 30.1 7.1 95 73-171 2-111 (329)
417 PRK05562 precorrin-2 dehydroge 58.6 1.2E+02 0.0026 26.1 10.3 92 72-177 27-119 (223)
418 cd02067 B12-binding B12 bindin 58.5 54 0.0012 24.7 6.9 86 109-196 18-108 (119)
419 TIGR01305 GMP_reduct_1 guanosi 57.9 1.6E+02 0.0034 27.2 11.6 125 73-197 97-241 (343)
420 PF04989 CmcI: Cephalosporin h 56.9 37 0.0008 28.7 6.0 97 77-177 43-149 (206)
421 COG1748 LYS9 Saccharopine dehy 56.7 1.1E+02 0.0023 28.9 9.5 106 72-182 3-129 (389)
422 cd02068 radical_SAM_B12_BD B12 56.4 73 0.0016 24.3 7.4 66 112-180 10-79 (127)
423 TIGR00511 ribulose_e2b2 ribose 55.7 1.1E+02 0.0024 27.7 9.3 97 72-174 117-222 (301)
424 PTZ00314 inosine-5'-monophosph 55.6 1.1E+02 0.0023 30.1 9.8 116 81-196 241-372 (495)
425 KOG4589 Cell division protein 54.9 93 0.002 26.0 7.6 40 128-167 121-165 (232)
426 PTZ00081 enolase; Provisional 53.5 90 0.002 30.0 8.7 90 84-175 288-382 (439)
427 PRK14106 murD UDP-N-acetylmura 53.4 64 0.0014 31.0 8.0 94 71-177 6-100 (450)
428 TIGR01060 eno phosphopyruvate 53.4 90 0.002 29.9 8.8 92 81-174 266-362 (425)
429 PRK08535 translation initiatio 53.4 1.2E+02 0.0026 27.6 9.3 97 72-174 122-227 (310)
430 PF10678 DUF2492: Protein of u 53.0 23 0.0005 24.6 3.4 51 53-103 17-69 (78)
431 cd00532 MGS-like MGS-like doma 52.6 94 0.002 23.2 7.2 84 85-176 17-106 (112)
432 PF14258 DUF4350: Domain of un 52.2 69 0.0015 21.4 5.9 62 109-175 9-70 (70)
433 PF07085 DRTGG: DRTGG domain; 51.6 69 0.0015 23.5 6.3 49 120-174 42-90 (105)
434 PRK08057 cobalt-precorrin-6x r 51.6 92 0.002 27.3 7.9 89 74-173 5-96 (248)
435 PRK06372 translation initiatio 51.5 1.7E+02 0.0037 25.7 9.6 97 72-174 88-190 (253)
436 TIGR02026 BchE magnesium-proto 51.4 82 0.0018 30.9 8.4 83 112-197 30-122 (497)
437 COG1184 GCD2 Translation initi 51.1 1.9E+02 0.0041 26.2 9.7 97 72-174 121-226 (301)
438 PRK00077 eno enolase; Provisio 50.7 1.1E+02 0.0023 29.4 8.9 89 84-174 268-361 (425)
439 PF02603 Hpr_kinase_N: HPr Ser 50.5 30 0.00066 26.7 4.3 38 131-174 73-110 (127)
440 PRK02261 methylaspartate mutas 50.2 1.2E+02 0.0025 23.8 7.6 69 107-177 20-93 (137)
441 cd03313 enolase Enolase: Enola 50.2 98 0.0021 29.5 8.5 92 81-174 265-361 (408)
442 PF02254 TrkA_N: TrkA-N domain 50.1 52 0.0011 24.5 5.5 84 74-167 2-85 (116)
443 PF02571 CbiJ: Precorrin-6x re 48.0 92 0.002 27.3 7.3 24 74-98 3-27 (249)
444 COG0552 FtsY Signal recognitio 47.4 92 0.002 28.5 7.3 131 80-215 153-305 (340)
445 PF06506 PrpR_N: Propionate ca 47.1 76 0.0016 26.0 6.4 20 117-136 99-118 (176)
446 PRK01438 murD UDP-N-acetylmura 46.7 90 0.002 30.3 7.9 94 71-177 17-110 (480)
447 PRK05993 short chain dehydroge 45.8 1.3E+02 0.0029 26.4 8.4 69 73-146 6-83 (277)
448 COG2984 ABC-type uncharacteriz 45.6 1.4E+02 0.003 27.2 8.0 66 109-177 179-247 (322)
449 TIGR03853 matur_matur probable 45.6 39 0.00084 23.4 3.6 50 53-103 15-67 (77)
450 PLN02476 O-methyltransferase 45.4 1.6E+02 0.0034 26.4 8.4 119 58-183 107-235 (278)
451 PF00265 TK: Thymidine kinase; 45.0 69 0.0015 26.4 5.8 91 81-175 17-109 (176)
452 CHL00194 ycf39 Ycf39; Provisio 45.0 1.4E+02 0.003 27.0 8.5 91 74-170 3-102 (317)
453 PRK10886 DnaA initiator-associ 44.4 1.6E+02 0.0035 24.7 8.0 45 130-178 101-145 (196)
454 PF00106 adh_short: short chai 43.8 83 0.0018 24.9 6.2 94 73-167 2-110 (167)
455 cd04736 MDH_FMN Mandelate dehy 43.8 82 0.0018 29.4 6.6 85 112-196 230-317 (361)
456 PRK07102 short chain dehydroge 43.4 1.4E+02 0.0029 25.6 7.9 73 74-146 4-83 (243)
457 PLN02274 inosine-5'-monophosph 43.2 1.7E+02 0.0037 28.8 9.0 115 81-195 248-378 (505)
458 PF01073 3Beta_HSD: 3-beta hyd 43.2 1.4E+02 0.0031 26.6 8.1 89 79-171 7-109 (280)
459 PRK08309 short chain dehydroge 42.8 1.9E+02 0.0041 23.8 8.5 92 74-171 3-101 (177)
460 COG0296 GlgB 1,4-alpha-glucan 42.8 25 0.00054 35.2 3.3 33 147-179 205-237 (628)
461 smart00642 Aamy Alpha-amylase 42.6 27 0.00059 28.4 3.0 28 152-179 66-93 (166)
462 PF03435 Saccharop_dh: Sacchar 42.4 2.3E+02 0.0049 26.6 9.7 90 74-175 2-96 (386)
463 CHL00200 trpA tryptophan synth 42.4 1.4E+02 0.003 26.5 7.7 50 114-169 115-168 (263)
464 PRK05234 mgsA methylglyoxal sy 42.3 88 0.0019 24.7 5.8 48 130-177 65-114 (142)
465 COG1066 Sms Predicted ATP-depe 41.4 3.2E+02 0.007 26.0 10.4 85 87-174 115-215 (456)
466 COG2185 Sbm Methylmalonyl-CoA 41.3 78 0.0017 25.0 5.2 75 94-170 13-92 (143)
467 TIGR03679 arCOG00187 arCOG0018 41.0 2.3E+02 0.005 24.2 8.8 54 74-127 2-65 (218)
468 cd04726 KGPDC_HPS 3-Keto-L-gul 40.8 1.6E+02 0.0035 24.5 7.7 83 112-195 97-184 (202)
469 PRK05678 succinyl-CoA syntheta 40.7 1.1E+02 0.0024 27.6 6.8 72 100-178 51-125 (291)
470 TIGR01501 MthylAspMutase methy 40.1 1.8E+02 0.0038 22.8 7.0 67 102-170 13-81 (134)
471 PRK02705 murD UDP-N-acetylmura 40.0 2.6E+02 0.0056 26.9 9.9 97 73-176 3-99 (459)
472 COG0300 DltE Short-chain dehyd 39.6 1.4E+02 0.003 26.5 7.1 64 72-136 7-75 (265)
473 COG0159 TrpA Tryptophan syntha 39.3 1.7E+02 0.0037 25.9 7.5 14 138-151 146-159 (265)
474 TIGR01019 sucCoAalpha succinyl 38.7 1.1E+02 0.0024 27.4 6.6 75 97-178 46-123 (286)
475 PF01008 IF-2B: Initiation fac 38.7 2.7E+02 0.0058 24.8 9.1 100 71-175 108-216 (282)
476 COG0031 CysK Cysteine synthase 38.4 72 0.0016 28.8 5.2 81 73-155 65-155 (300)
477 PLN02253 xanthoxin dehydrogena 37.9 78 0.0017 27.9 5.6 75 72-146 19-101 (280)
478 COG1737 RpiR Transcriptional r 37.8 2.5E+02 0.0055 25.0 8.8 54 136-197 175-228 (281)
479 PF00926 DHBP_synthase: 3,4-di 37.5 85 0.0018 26.3 5.2 42 132-174 145-186 (194)
480 PRK13397 3-deoxy-7-phosphohept 37.4 2.7E+02 0.0058 24.5 8.4 56 127-182 133-197 (250)
481 PRK06182 short chain dehydroge 37.3 2E+02 0.0043 25.2 8.1 73 73-150 5-85 (273)
482 cd01078 NAD_bind_H4MPT_DH NADP 37.3 2.4E+02 0.0052 23.3 11.2 104 72-182 30-134 (194)
483 PRK06194 hypothetical protein; 36.3 2.3E+02 0.0051 24.9 8.5 76 72-148 7-92 (287)
484 PRK08340 glucose-1-dehydrogena 36.2 1E+02 0.0022 26.8 6.0 73 74-146 3-83 (259)
485 COG0108 RibB 3,4-dihydroxy-2-b 35.6 84 0.0018 26.4 4.8 42 132-174 149-190 (203)
486 PRK06179 short chain dehydroge 35.2 2.4E+02 0.0051 24.6 8.3 70 72-148 5-82 (270)
487 cd03315 MLE_like Muconate lact 35.1 1.3E+02 0.0028 26.5 6.5 78 97-176 159-238 (265)
488 cd01422 MGS Methylglyoxal synt 34.9 2E+02 0.0043 21.7 7.0 57 117-174 44-106 (115)
489 PRK06559 nicotinate-nucleotide 34.9 76 0.0016 28.5 4.8 69 93-166 167-239 (290)
490 PRK08091 ribulose-phosphate 3- 34.7 2.8E+02 0.0061 23.9 8.1 83 113-197 111-207 (228)
491 COG0352 ThiE Thiamine monophos 34.5 78 0.0017 27.0 4.6 50 129-178 24-74 (211)
492 PRK12384 sorbitol-6-phosphate 34.5 2.9E+02 0.0063 23.8 8.7 74 73-146 4-88 (259)
493 cd04795 SIS SIS domain. SIS (S 34.4 1.5E+02 0.0033 20.3 6.7 35 136-174 45-79 (87)
494 PRK12935 acetoacetyl-CoA reduc 34.2 2.6E+02 0.0056 23.9 8.2 75 72-147 7-92 (247)
495 TIGR00715 precor6x_red precorr 33.9 3.3E+02 0.0072 24.0 9.9 39 129-167 213-253 (256)
496 cd03316 MR_like Mandelate race 33.7 3.9E+02 0.0084 24.7 10.1 78 96-175 218-297 (357)
497 cd03319 L-Ala-DL-Glu_epimerase 33.6 1.8E+02 0.0038 26.5 7.2 79 96-176 206-286 (316)
498 COG0514 RecQ Superfamily II DN 33.5 1.3E+02 0.0028 30.1 6.5 98 79-183 44-146 (590)
499 PF10087 DUF2325: Uncharacteri 33.5 1.8E+02 0.004 20.9 6.3 62 110-176 15-82 (97)
500 PRK01710 murD UDP-N-acetylmura 33.4 4.5E+02 0.0098 25.4 10.7 94 71-176 15-108 (458)
No 1
>COG0626 MetC Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-55 Score=399.51 Aligned_cols=379 Identities=50% Similarity=0.808 Sum_probs=354.4
Q ss_pred CCCccceeeccCCCC-CCCCCcccceeeeeeeecCCCCC--------CCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 016612 6 EPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (386)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (386)
+..+++++++.|... +.+|.+++|+++++++..++... ...+.|++.|+|.+..+++.++++-|.++.+.+
T Consensus 5 ~~~~~T~~v~~g~~~~~~~gav~~PI~~tStf~~~~~~~~~~~~~~~~~~~~Y~R~~nPT~~~lE~~~a~LEg~~~~~af 84 (396)
T COG0626 5 KLSLTTRLVHAGRRPDDLTGAVNPPIYLTSTFVFDSAGEGLDAFAGEEGGYDYSRTGNPTRDALEEALAELEGGEDAFAF 84 (396)
T ss_pred ccccceeeEEcccccccCCCcccCCeeeeeeecccChhhhhhhccccccCcccccCCCccHHHHHHHHHHhhCCCcEEEe
Confidence 456789999999655 56999999999999998876643 467889999999999999999999999999999
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCCcc
Q 016612 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 77 ~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~ 154 (386)
+||++|+. +++.++++||+|++++..|+++.+.+..+.+++|+++.+++..+.+++++++. ++|++|++++|+||+..
T Consensus 85 sSGmaAI~~~~l~ll~~GD~vl~~~~~YG~t~~~~~~~l~~~gi~~~~~d~~~~~~~~~~~~~~~tk~v~lEtPsNP~l~ 164 (396)
T COG0626 85 SSGMAAISTALLALLKAGDHVLLPDDLYGGTYRLFEKILQKFGVEVTFVDPGDDEALEAAIKEPNTKLVFLETPSNPLLE 164 (396)
T ss_pred cCcHHHHHHHHHHhcCCCCEEEecCCccchHHHHHHHHHHhcCeEEEEECCCChHHHHHHhcccCceEEEEeCCCCcccc
Confidence 99999997 58889999999999999999999999999999999999999988888887777 59999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh-hcCC
Q 016612 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGS 233 (386)
Q Consensus 155 ~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~-~~~~ 233 (386)
+.|+++|+++|+++|+++++|++++.|.+++|++.|+||++.|.+|+++|++.+.+|+++++++.+.+.+....+ ..|.
T Consensus 165 v~DI~~i~~~A~~~g~~vvVDNTfatP~~q~PL~~GaDIVvhSaTKyl~GHsDvl~G~v~~~~~~~~~~~~~~~~~~~G~ 244 (396)
T COG0626 165 VPDIPAIARLAKAYGALVVVDNTFATPVLQRPLELGADIVVHSATKYLGGHSDVLGGVVLTPNEELYELLFFAQRANTGA 244 (396)
T ss_pred cccHHHHHHHHHhcCCEEEEECCcccccccChhhcCCCEEEEeccccccCCcceeeeEEecChHHHHHHHHHHHHhhcCC
Confidence 999999999999999999999999999999999999999999999999999999999888788888887766666 4899
Q ss_pred CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHH
Q 016612 234 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 313 (386)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 313 (386)
.++++.+|+++++++.+..|+++..+|+..+.++|++++.++++++|+++++|++++..++.++.|++++|.+.+.+...
T Consensus 245 ~l~p~dA~l~lRGlkTL~~Rm~~~~~nA~~IA~~L~~~p~V~~V~yPgl~shp~he~~~rq~~g~gg~~Sf~l~~~~~~~ 324 (396)
T COG0626 245 VLSPFDAWLLLRGLRTLALRMERHNENALKIAEFLADHPKVKKVYYPGLPSHPGHELAKRQMTGYGGLFSFELKNEEAAK 324 (396)
T ss_pred CCCHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCCcHHHHHHhcCCCceEEEEEeCChHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999988789999999997646689
Q ss_pred HHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 314 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 314 ~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+|++.++.+.+..+.|+..+++++|+.++|..++.+.+.+.|+.+++||+|+|.|+++++++.|+++|+++
T Consensus 325 ~f~~~L~l~~~a~SlGgveSLi~~pa~~th~~~~~~~r~~~Gi~~~LvRlSVGlEd~eDLi~Dl~~Al~~~ 395 (396)
T COG0626 325 KFLDSLKLFKLAESLGGVESLISHPATMTHASIPLEERAKAGITDGLVRLSVGLEDVEDLIADLEQALAKA 395 (396)
T ss_pred HHHHhCCccEEeccCCCcccccccccccCcccCCHhHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999875
No 2
>PRK08861 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.2e-54 Score=401.76 Aligned_cols=381 Identities=39% Similarity=0.622 Sum_probs=346.8
Q ss_pred CCCCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHH
Q 016612 4 EEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (386)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~a 82 (386)
++|..+++++++.|.. ....|.+.||++++++|..++......+.|++.|+|.+..+++.++++.|.+.+++++||+++
T Consensus 1 ~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~Y~R~~npt~~~Le~~lA~leg~e~ivvt~gg~~A 80 (388)
T PRK08861 1 MSTRKPATIAVRTGIESDSQYHAVVPPIYLSTNYGFPAFGEVPKYDYTRSGNPNRGLLEQTLSELESGKGAVVTNCGTSA 80 (388)
T ss_pred CCCCCcccceeECCCCCCCCCCCccCCcccCcceEeCCcCccCCccccCCCCchHHHHHHHHHHHhCCCeEEEECCHHHH
Confidence 3566788999999854 334799999999999998766544456779999999999999999999999999999999999
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHH
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
+. ++.+++++||+|++++|.|++....+.......|++++.++..|++++++++++++++|++++|+||||.+.|+++|
T Consensus 81 i~~~l~all~~Gd~Il~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~i~~~tklV~lesP~NPtG~v~dl~~I 160 (388)
T PRK08861 81 LNLWVSALLGPDDLIVAPHDCYGGTYRLFNTRANKGDFKVQFVDQSDAAALDAALAKKPKLILLETPSNPLVRVVDIAEL 160 (388)
T ss_pred HHHHHHHHcCCCCEEEEcCCchHHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCcccCHHHH
Confidence 97 45668999999999999999877666566667789999999889999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHH
Q 016612 162 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 241 (386)
Q Consensus 162 ~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (386)
.++|+++|+++|+|++|+.+....+.+.|+|+++.|++|+++|++++++|+++++++++.+.+.......|..++++.+|
T Consensus 161 ~~la~~~gi~vIvDea~~~~~~~~pl~~GaDivv~S~tK~l~G~~d~~gG~i~~~~~~~~~~~~~~~~~~G~~~~p~~a~ 240 (388)
T PRK08861 161 CQKAKAVGALVAVDNTFLTPVLQKPLELGADFVIHSTTKYINGHSDVIGGVLITKTKEHAEELAWWGNCIGATGTPFDSY 240 (388)
T ss_pred HHHHHHcCCEEEEECCccccccCCCcccCCCEEEeecceeccCCCcceeEEEEecHHHHHHHHHHHHhccCCCCChHHHH
Confidence 99999999999999999998877788889999999999999999888999999877778777777778888999999999
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcC
Q 016612 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTK 320 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~ 320 (386)
+++++++.+..|+++..+++..+.++|++++.+..+.+|+++++|++.++.++..+.|++++|.+. +.+...+|++.++
T Consensus 241 l~~rgl~Tl~lR~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~~f~~~l~ 320 (388)
T PRK08861 241 MTLRGIRTLGARMRVHEESAQQILAYLQTQSLVGTIYHPSLPEHPGHEIAKKQQSGFGSMLSFEFAGSFEQLKVFVKALA 320 (388)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhCCCCCceEEEEeCCCHHHHHHHHhcCC
Confidence 999999999999999999999999999999999999999999999999988888889999999995 4667889999999
Q ss_pred cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 321 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 321 ~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
...+..+.|+..+++.+|+.++|..++++++...|+.++.||+|+|+|+.+++++.|+++|+++
T Consensus 321 l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liRlsvGlE~~~dli~Dl~~al~~~ 384 (388)
T PRK08861 321 LFSLAESLGGVESLICHPASMTHRAMGEEALAEAGVSQQLLRLSVGLEDAQDLIADLDQAFAKA 384 (388)
T ss_pred cceEccCCCCCcceeeCCCcccccccCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999999864
No 3
>PLN02509 cystathionine beta-lyase
Probab=100.00 E-value=2e-54 Score=406.22 Aligned_cols=385 Identities=85% Similarity=1.290 Sum_probs=352.3
Q ss_pred CCCCCCCccceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHH
Q 016612 2 SVEEEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMA 81 (386)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~ 81 (386)
++++++..++.+++.+...+.+|.+.+|++++++|..++......+.|++.|+|.+++++++++++.|.+.++++++|++
T Consensus 80 ~~~~~~~~~t~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~Y~r~gnpt~~aLE~~lA~leg~e~ai~~~SG~a 159 (464)
T PLN02509 80 NIKEEASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMA 159 (464)
T ss_pred ccccCCCcchHheeCCCCCCCCCCccCCccccceecCccccccCCCccCCCCCHHHHHHHHHHHHHhCCCEEEEeCcHHH
Confidence 45678889999999995556689999999999999877665556678999999999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHH
Q 016612 82 ALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 82 al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
++.+++.++++||+|+++++.|+++...+...+...|++++.++..|++++++++++++++|++++|+||+|.+.|+++|
T Consensus 160 Ai~~il~ll~~GD~VI~~~~~y~~t~~ll~~~l~~~G~~v~~vd~~d~e~l~~ai~~~TklV~lesPsNPtG~i~Dl~~I 239 (464)
T PLN02509 160 ALSAVTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTNLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKI 239 (464)
T ss_pred HHHHHHHHhCCCCEEEEcCCchhhHHHHHHHHHHHCCeEEEEeCCCCHHHHHHhCCcCCeEEEEECCCCCCCCHHHHHHH
Confidence 88877778999999999999999987766666778899999999889999999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHH
Q 016612 162 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 241 (386)
Q Consensus 162 ~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (386)
.++|+++|+++|+|++++.+....+...++|++++|++|+++|++++.+|+++++++.+.+.+...+...+..+++..++
T Consensus 240 ~~lAk~~g~~lIVD~A~a~~~~~~pl~~gaDivv~S~tK~l~G~gdv~gG~v~~~~~~l~~~~~~~~~~~g~~l~p~~A~ 319 (464)
T PLN02509 240 AEMAHAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCW 319 (464)
T ss_pred HHHHHHcCCEEEEECCccccccCChhhcCCcEEEecCcccccCCCccceeEEEeccHHHHHHHHHHHHhcCCCcCHHHHH
Confidence 99999999999999999988877777789999999999999998888899999877777666666666667788999999
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc
Q 016612 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 321 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 321 (386)
+.+++++.+..|+++..++++.+.++|++++.++.+.+|+|+++|++.+..++.++.|++++|.+.+.+...+|++.++.
T Consensus 320 l~lr~L~tL~~R~~r~~~nA~~la~~L~~~p~V~~V~yPgL~~~p~~~l~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l 399 (464)
T PLN02509 320 LCLRGIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKY 399 (464)
T ss_pred HHHhhhhhHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEeCCHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999999888888999999999777778899999999
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCCC
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 386 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~~ 386 (386)
+.+..++|+..+++++|+.++|..++.+++.+.|+.++.||+|+|+|+.+++++.|.++|+..++
T Consensus 400 ~~~a~slG~~~SLi~~p~~~sh~~~~~~~~~~~Gi~~~liRlSvGlE~~~DLi~Dl~~Al~~~~~ 464 (464)
T PLN02509 400 FSIAVSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFRTGPL 464 (464)
T ss_pred ceEcccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHcccCC
Confidence 99999999999999999999999999999999999999999999999999999999999987653
No 4
>TIGR01329 cysta_beta_ly_E cystathionine beta-lyase, eukaryotic. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=1.9e-53 Score=395.38 Aligned_cols=377 Identities=75% Similarity=1.139 Sum_probs=343.5
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL 89 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~ 89 (386)
++.+++.|..+++.|.+.||++++++|..+.......+.|++.|+|.++++++.+++++|.++.+++++|++++++++.+
T Consensus 2 ~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~la~l~g~~~~l~~~sG~~al~~~l~l 81 (378)
T TIGR01329 2 STLLVNTDNKNDPYDASSMPIYQTATFKQPLAIENGPYDYTRSGNPTRTALESLLAKLDKADRAFAFSSGMAALDVITRL 81 (378)
T ss_pred CceeEeCCCCCCCCCCcCCCeecCcceecCCccccCCCccCCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHH
Confidence 35667777444557999999999999987665555568899999999999999999999999999999999998877678
Q ss_pred cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcC
Q 016612 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 90 ~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~ 169 (386)
+++||+|+++++.|+++...+...++..|+++++++..|++++++++++++++|++++|+||+|.+.|+++|.++|+++|
T Consensus 82 l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~~~le~~i~~~tklv~le~psnptg~v~dl~~I~~la~~~g 161 (378)
T TIGR01329 82 LNNGDEIIAGDDLYGGTDRLLTQVVPRSGVVVVHVDTTDLDKVKAALGPKTKLVLLESPTNPLQKIVDIRKISEMAHAQN 161 (378)
T ss_pred hCCCCEEEEcCCCchHHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCeeecHHHHHHHHHHcC
Confidence 99999999999999998777777778899999999999999999999999999999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc
Q 016612 170 ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (386)
Q Consensus 170 ~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (386)
+++|+|++++.+....+...++|++++|++|+++|++++++|+++++++.+.+.+.......+..+++..++++.++++.
T Consensus 162 ~~vivD~a~~~~~~~~~l~~g~Di~v~S~tK~l~G~~~~~~G~v~~~~~~~~~~~~~~~~~~G~~~~~~~a~l~~~~l~t 241 (378)
T TIGR01329 162 ALVVVDNTMMSPLLCNPLELGADIVYHSATKFLAGHSDVMAGVLAVKGEEIAKKVYFLQNSTGSGLAPFDCWLLLRGIKT 241 (378)
T ss_pred CEEEEECCCcccccCChhhcCCcEEEEecceeccCCccceeEEEEeCcHHHHHHHHHHHHhcCCcCCHHHHHHHHccCCC
Confidence 99999999988877777778999999999999999888889999998777777777777667788899999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCC
Q 016612 250 MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFG 329 (386)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G 329 (386)
+..|+++..+++..+.++|++++.+..+++++|+++|++.++.+...+.+++++|.+.+.....++++.++.+++.++.|
T Consensus 242 l~~R~e~~~~na~~la~~L~~~~~v~~v~~p~l~~~p~~~l~~~~~~g~~~~~sf~~~~~~~~~~~~~~L~~~~i~~s~G 321 (378)
T TIGR01329 242 LAIRIEKQQENARAIAMFLSTHPRVKKVRYAGLPSHPGFHLHFSQAKGAGSVLSFETGSVALSKRLVEATKLFSITVSFG 321 (378)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCcCcccccCCC
Confidence 99999999999999999999999999999999999999999988777889999999977666889999999999999999
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCCC
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 386 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~~ 386 (386)
+..+++++|+.++|..++++++.+.|+.++.||+|+|.|+.+++++.|+++|++++.
T Consensus 322 ~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~~ 378 (378)
T TIGR01329 322 SVNSLISMPCFMSHASIPAEVREERGLPEDLVRLSVGIEDVDDLISDLDIAFVTAPA 378 (378)
T ss_pred CCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999999999999999999998763
No 5
>PF01053 Cys_Met_Meta_PP: Cys/Met metabolism PLP-dependent enzyme; InterPro: IPR000277 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent enzymes involved in the metabolism of cysteine, homocysteine and methionine have been shown [, ] to be evolutionary related. These enzymes are proteins of about 400 amino-acid residues. The pyridoxal-P group is attached to a lysine residue located in the central section of these enzymes.; GO: 0030170 pyridoxal phosphate binding, 0006520 cellular amino acid metabolic process; PDB: 1PFF_A 2NMP_A 3ELP_B 3COG_C 1CS1_A 1E5E_B 3RI6_A 1E5F_A 2FQ6_B 1CL2_B ....
Probab=100.00 E-value=3.2e-53 Score=389.60 Aligned_cols=372 Identities=48% Similarity=0.779 Sum_probs=324.6
Q ss_pred ceeeccCCCCC--CCCCcccceeeeeeeecCC-------CCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHH
Q 016612 11 TLLMNFSNEFD--PYGALSTPLYQTATFKQPS-------ATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMA 81 (386)
Q Consensus 11 ~~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~-------~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~ 81 (386)
|++++.|...+ .+|.+.||++++++|..++ ......+.|+|.|+|.+..+++.++++.|.+.+++++||++
T Consensus 2 T~~vh~g~~~~~~~~~~v~~pi~~sstf~~~~~~~~~~~~~~~~~~~Y~R~gnPt~~~le~~la~Le~g~~a~~~~SGma 81 (386)
T PF01053_consen 2 TLLVHAGRDPDEDQTGAVNPPIYQSSTFVFDSAEELDAFAGEEKGYIYSRYGNPTVRALEQRLAALEGGEDALLFSSGMA 81 (386)
T ss_dssp HHHHHTTTTGGTSTTTBSS--B---SBBBBSSHHHHHHHTTSSSSCSBTTTC-HHHHHHHHHHHHHHT-SEEEEESSHHH
T ss_pred cceEeCCCCCCCCCCCCeeCCccccccCcccchHHHHhhcCCCCCcceeccccccHHHHHHHHHHhhcccceeeccchHH
Confidence 56788886654 7999999999999998873 23455688999999999999999999999999999999999
Q ss_pred HHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHH
Q 016612 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 82 al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
|+. ++++++++||+|++++..|+++...+...+...|+++.+++..|++++++++++++++|+++.|+||+..+.|+++
T Consensus 82 Ai~~~l~~ll~~Gd~iv~~~~~Y~~t~~~~~~~l~~~gv~v~~~d~~d~~~l~~~l~~~t~~v~~EspsNP~l~v~Dl~~ 161 (386)
T PF01053_consen 82 AISAALLALLKPGDHIVASDDLYGGTYRLLEELLPRFGVEVTFVDPTDLEALEAALRPNTKLVFLESPSNPTLEVPDLEA 161 (386)
T ss_dssp HHHHHHHHHS-TTBEEEEESSSSHHHHHHHHHCHHHTTSEEEEESTTSHHHHHHHHCTTEEEEEEESSBTTTTB---HHH
T ss_pred HHHHHHHhhcccCCceEecCCccCcchhhhhhhhcccCcEEEEeCchhHHHHHhhccccceEEEEEcCCCcccccccHHH
Confidence 995 7788999999999999999999999888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHcC-CEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcC-hhHHHHHHHhhhhcCCCCChh
Q 016612 161 IAEMAHAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKG-ERLAKELYFLQNAEGSGLAPF 238 (386)
Q Consensus 161 i~~la~~~~-~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~-~~~~~~~~~~~~~~~~~~~~~ 238 (386)
|+++|+++| +++++|.+++.|...+++..|+|+++.|++|+++|++.+++|.+++++ +.+.+.++......|..+++.
T Consensus 162 i~~~a~~~g~~~~vVDnT~atp~~~~pL~~GaDivv~S~TKyl~Ghsdv~~G~vv~~~~~~~~~~l~~~~~~~G~~~~p~ 241 (386)
T PF01053_consen 162 IAKLAKEHGDILVVVDNTFATPYNQNPLELGADIVVHSATKYLSGHSDVMGGAVVVNGSSELYDRLREFRRLLGATLSPF 241 (386)
T ss_dssp HHHHHHHTTT-EEEEECTTTHTTTC-GGGGT-SEEEEETTTTTTTSSSE-EEEEEESSHHHHHHHHHHHHHHHT-B--HH
T ss_pred HHHHHHHhCCceEEeeccccceeeeccCcCCceEEEeeccccccCCcceeeEEEEECchhhhhhhhcchhhhcCccchHH
Confidence 999999998 999999999999988999999999999999999999999999999987 567777777888889999999
Q ss_pred hHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHH-hHHHHHh
Q 016612 239 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVVE 317 (386)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~ 317 (386)
.+++++++++.+..|+++..+|+..+.++|++++.++.+.+|+++++|++.++.+..++.+++++|.+.+.. ...++++
T Consensus 242 da~ll~rgl~Tl~~R~~~~~~nA~~lA~~L~~hp~V~~V~yPgl~s~p~~~~~~~~~~g~ggl~sf~l~~~~~~~~~f~~ 321 (386)
T PF01053_consen 242 DAWLLLRGLRTLPLRMERQNENAEALAEFLEEHPKVKRVYYPGLPSHPQHELAKRQMSGGGGLLSFELKGGEEAARRFLD 321 (386)
T ss_dssp HHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTSTTEEEEEETTSTTSTTHHHHHHHCSSCTSEEEEEESSHHHHHHHHHH
T ss_pred HHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEcccccccceeeeeecccccCceeEEEeccchhhhHhHHh
Confidence 999999999999999999999999999999999999999999999999999999888899999999998774 8999999
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
+++...+..++|+..+++.+|+..+|..++.+.+...|+.+++||+|+|+|+.+++++.|++||+
T Consensus 322 ~l~l~~~~~SlGg~~SLi~~p~~~~h~~~~~e~~~~~Gi~~~liRlSvGlEd~~dLi~Dl~~AL~ 386 (386)
T PF01053_consen 322 ALKLFSIAPSLGGVESLISHPASTSHRSLSPEERAEAGISDGLIRLSVGLEDPDDLIADLEQALE 386 (386)
T ss_dssp H-SSSEESSS-SSSS-EEEETTCTTTTTSCHHHHHHTTS-TTEEEEE--SS-HHHHHHHHHHHHH
T ss_pred hhhhHhhhhhcCCcccccccccchhhccCChhhhhccCCCCCeeEEEeccCCHHHHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999999999999999999999986
No 6
>PRK08045 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=2.9e-52 Score=387.32 Aligned_cols=377 Identities=38% Similarity=0.598 Sum_probs=340.7
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-H
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~ 85 (386)
.+++..++.|.. .+..|.+.||++++++|..++......+.|++.++|.++++++.++++.|.++.+++++|++++. +
T Consensus 4 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~Y~R~~~pt~~~L~~~lA~l~g~~~~i~~~sg~~Ai~~~ 83 (386)
T PRK08045 4 KQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLV 83 (386)
T ss_pred CcccceeEcCCCCCCCCCCccCCccCCcceecCCccccCCceeeCCCCccHHHHHHHHHHHhCCCeEEEECCHHHHHHHH
Confidence 467888888844 44579999999999999876654445677999999999999999999999888899999999987 4
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la 165 (386)
+.+++++||+|++++|.|+++...+..+....++++..++..|++++++++++++++|++++|+||||.+.|+++|.++|
T Consensus 84 l~~l~~~GD~Vl~~~~~y~~~~~~~~~~~~~~gi~v~~vd~~d~e~l~~~l~~~tklV~l~sP~NPtG~v~di~~I~~ia 163 (386)
T PRK08045 84 TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLA 163 (386)
T ss_pred HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhCCeEEEEeCCCCHHHHHHhcccCCeEEEEECCCCCCCEecCHHHHHHHH
Confidence 56689999999999999998776766666667778888887799999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
+++|+++|+|++|..+....+...++|+++.|++|+++|++++++|+++++++++.+.+.......+..+++..++++++
T Consensus 164 ~~~g~~vivDeay~~~~~~~pl~~gaDivv~S~tK~l~G~~d~~~G~vi~~~~~~~~~l~~~~~~~g~~~~p~~~~l~~r 243 (386)
T PRK08045 164 REAGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLR 243 (386)
T ss_pred HHcCCEEEEECCCCccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999999887777788899999999999999999999999988777777777777777788899999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCccee
Q 016612 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSI 324 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi 324 (386)
+++.+..|+++..+|+..+.++|++++.++.+++|+++++|++.+..++.++.|++++|.++ +.+...+|+++++...+
T Consensus 244 gl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yp~l~~~p~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~ 323 (386)
T PRK08045 244 GLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGDEQTLRRFLGGLSLFTL 323 (386)
T ss_pred hhccHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEecCcHHHHHHHHHhccceeE
Confidence 99999999999999999999999999999999999999999999988877889999999995 45667899999999999
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
..+.|+..+++.+|+.++|..++++++...|+.++.||+|+|+|+.+++++.|.++|+++
T Consensus 324 ~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 383 (386)
T PRK08045 324 AESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_pred eccCCCCceeEeCCCCcccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999875
No 7
>PRK06176 cystathionine gamma-synthase/cystathionine beta-lyase; Validated
Probab=100.00 E-value=5e-52 Score=385.37 Aligned_cols=377 Identities=44% Similarity=0.729 Sum_probs=343.9
Q ss_pred ccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHH
Q 016612 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (386)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~ 87 (386)
+++.+++.+.. ....|.+.||++++++|..++......+.|++.++|....+++.++++.|.+..++++||++|+.+++
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~la~l~g~~~al~~~SG~~Al~~~l 82 (380)
T PRK06176 3 MQTKLIHGGISEDTTTGAVSVPIYQTSTYRQDAIGRPKGYEYSRSGNPTRFALEELIADLEGGVKGFAFASGLAGIHAVF 82 (380)
T ss_pred ccceeeECCCCCCCCCCCccCCcccCCceecCCCCCcCCCcccCCCChhHHHHHHHHHHHhCCCCEEEECCHHHHHHHHH
Confidence 45777888844 33479999999999999876654445678999999999999999999999999999999999998777
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~ 167 (386)
.+++|||+|+++++.|++....+...+...|++++.++..|++++++++++++++|++++|+||+|.+.|+++|.++|++
T Consensus 83 ~~l~pGd~Vi~~~~~y~~t~~~~~~~~~~~gi~v~~vd~~d~e~l~~ai~~~t~lV~lesP~Nptg~~~di~~I~~la~~ 162 (380)
T PRK06176 83 SLFQSGDHVLLGDDVYGGTFRLFDKVLVKNGLSCTIIDTSDLSQIKKAIKPNTKALYLETPSNPLLKITDLAQCASVAKD 162 (380)
T ss_pred HHcCCCCEEEEcCCChhHHHHHHHHHHHhcCeEEEEcCCCCHHHHHHhcCcCceEEEEECCCCCCceecCHHHHHHHHHH
Confidence 88999999999999999888777777888999999999999999999999999999999999999999999999999999
Q ss_pred cCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC
Q 016612 168 HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (386)
Q Consensus 168 ~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
+|+++|+|++++.+....+...++|++++|++|+++|++.+.+|+++++++++.+.+...+...+..+++..++...+++
T Consensus 163 ~gi~vivD~t~a~~~~~~p~~~gaDivv~S~tK~l~g~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~~~~~l~~~gl 242 (380)
T PRK06176 163 HGLLTIVDNTFATPYYQNPLLLGADIVVHSGTKYLGGHSDVVAGLVTTNNEALAQEIAFFQNAIGGVLGPQDSWLLQRGI 242 (380)
T ss_pred cCCEEEEECCccccccCCccccCCCEEEecCceeccCCccceeeEEEecHHHHHHHHHHHHHHhcCCCCHHHHHHHHhcc
Confidence 99999999999988777777889999999999999988877899999877778777777777777888888999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccC
Q 016612 248 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 327 (386)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~ 327 (386)
+.+..|+++..+++..+.+++++++.+..+++++++++|++.++.++.++.|++++|.+++.+...+|++.++.+.+..+
T Consensus 243 ~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~~~~~~~s 322 (380)
T PRK06176 243 KTLGLRMEAHQKNALCVAEFLEKHPKVEKVYYPGLPTHPNHELAKKQMRGFSGMLSFTLKNDSEAVAFVESLKLFILGES 322 (380)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCcceEccC
Confidence 99999999999999999999999999999999999999999998877788999999999777778899999999999999
Q ss_pred CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 016612 328 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 385 (386)
.|+..+++++|+..+|..++++++...|+.++.||+|+|+|+.+++++.|+++|++.+
T Consensus 323 ~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~Al~~~~ 380 (380)
T PRK06176 323 LGGVESLVGIPAFMTHACIPKEQREAAGIRDGLVRLSVGIEHEQDLLEDLEQAFAKIG 380 (380)
T ss_pred CCCCCceeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999999999999998753
No 8
>PRK08064 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.9e-51 Score=383.46 Aligned_cols=380 Identities=45% Similarity=0.768 Sum_probs=344.7
Q ss_pred CCCCccceeeccCCCCC-CCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHH
Q 016612 5 EEPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAAL 83 (386)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al 83 (386)
++.++++..++.|...+ .+|++++|+++++++..++......+.|++.++|..+++++.++++.|.+..+++++|+.++
T Consensus 3 ~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~sG~~ai 82 (390)
T PRK08064 3 MSYSIDTLLLHNQYKHDKQTGAVNVPIYHASTFHQFDFDTFGKYDYSRSGNPTREALEDIIAELEGGTKGFAFASGMAAI 82 (390)
T ss_pred CCCCcccceeeCCCCCCCCCCCccCCcccCcceecCcccccCCCcccCCCChhHHHHHHHHHHHhCCCCeEEECCHHHHH
Confidence 34457788899885433 47999999999999987776666667799999999999999999999999899999999998
Q ss_pred HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHH
Q 016612 84 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAE 163 (386)
Q Consensus 84 ~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~ 163 (386)
.+++.++++||+|+++++.|+++...+...++..|++++.++..|++++++.+++++++|++++|+||+|.+.|+++|.+
T Consensus 83 ~~~l~~l~~Gd~Vlv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~tklV~l~~p~NptG~~~dl~~I~~ 162 (390)
T PRK08064 83 STAFLLLSKGDHVLISEDVYGGTYRMITEVLSRFGIEHTFVDMTNLEEVAQNIKPNTKLFYVETPSNPLLKVTDIRGVVK 162 (390)
T ss_pred HHHHHHhCCCCEEEEccCccchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCcEeccHHHHHH
Confidence 76556889999999999999988777777778899999999998999999999999999999999999999999999999
Q ss_pred HHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHH
Q 016612 164 MAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (386)
Q Consensus 164 la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (386)
+|+++|+++|+|++|+.+....+.+.++|+++.|++|+++|++|+++|+++++++++.+.+.......+...++..++..
T Consensus 163 la~~~g~~vvvD~a~~~~~~~~~~~~g~Divv~S~tK~~~G~~~~laG~~v~~~~~~~~~l~~~~~~~g~~~~~~~a~l~ 242 (390)
T PRK08064 163 LAKAIGCLTFVDNTFLTPLLQKPLDLGADVVLHSATKFLAGHSDVLAGLAVVKDEELAQKLYFLQNSFGAVLGVQDCWLV 242 (390)
T ss_pred HHHHcCCEEEEECCCCcccccCchhhCCcEEEeecceeccCCccceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999999999988776666677999999999999999998889999888777888888887777888888899999
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcce
Q 016612 244 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 323 (386)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 323 (386)
.++++.+..|+++..+++..+.++|++++.+..+++++|+++|++.++.++.++.+++++|.+++.+...++++.++...
T Consensus 243 ~~gl~tl~~R~~~~~~~a~~la~~L~~~~~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~sf~~~~~~~~~~f~~~l~l~~ 322 (390)
T PRK08064 243 LRGLKTLHVRLEHSSETANKIALYLQEHPKVQNVYYPGLQTHLGFDIQQSQATSAGAVLSFTLQSEEAVRQFVSHVKLPV 322 (390)
T ss_pred HcccCcHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCccHHHHHHhCCCcceEEEEEECCHHHHHHHHHhCCcce
Confidence 99999999999999999999999999999999999999999999999888778899999999987777889999999988
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+.++.|+..+++++|+.++|...+.+++...|+.++.||+|+|.|+++++++.|.++|+++
T Consensus 323 ~~~s~G~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~SvGle~~~dli~dl~~Al~~~ 383 (390)
T PRK08064 323 FAVSLGAVESILSYPAKMSHAAMPKEERDERGITDGLLRLSVGLENVDDLIADFEQALSYV 383 (390)
T ss_pred EcccCCCCcceeECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhc
Confidence 8999999999999999999999999998888999999999999999999999999999875
No 9
>TIGR02080 O_succ_thio_ly O-succinylhomoserine (thiol)-lyase. This family consists of O-succinylhomoserine (thiol)-lyase, one of three different enzymes designated cystathionine gamma-synthase and involved in methionine biosynthesis. In all three cases, sulfur is added by transsulfuration from Cys to yield cystathionine rather than by a sulfhydrylation step that uses H2S directly and bypasses cystathionine.
Probab=100.00 E-value=2.6e-51 Score=380.83 Aligned_cols=377 Identities=41% Similarity=0.668 Sum_probs=338.1
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHH-
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA- 85 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~- 85 (386)
.+++.+++.+.. ++..|.+.||+..++.+..........+.|++.++|.++++++.++++.|.+++++++||++|+.+
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~~~~~~~Y~R~~~p~~~~le~~lA~l~g~~~v~~~~gg~~Ai~~~ 82 (382)
T TIGR02080 3 KQATIAVRSGLNSDTQYGCVVPPIYLSTTYNFTGFNEPRAYDYSRSGNPTRDLLQQALAELEGGAGAVVTNTGMSAIHLV 82 (382)
T ss_pred CcccceeecCCCCCCCCCCccCCeeCCceeEeCCcCccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHH
Confidence 456788888854 344799999999999987654333334679999999999999999999998888889999999974
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la 165 (386)
+.+++++||+|++++|.|+++...+..+....++++..++..|++++++++++++++|++++|+||||.+.|+++|.++|
T Consensus 83 l~all~~GD~Vl~~~p~y~~~~~~~~~~~~~~~~~v~~~d~~d~~~l~~ai~~~tklV~l~~p~NPtG~~~dl~~I~~la 162 (382)
T TIGR02080 83 TTALLGPDDLLVAPHDCYGGTYRLLNALAKKGCFRVLFVDQGDEQALRAALAQKPKLVLIETPSNPLLRVVDIAKICHLA 162 (382)
T ss_pred HHHHcCCCCEEEEcCCCcHHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCEecCHHHHHHHH
Confidence 55689999999999999998877766666777889998888899999999998999999999999999999999999999
Q ss_pred HHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
+++|+++++|++|+.+....+...++|+++.|++|+++|++++++|+++++++++.+.+.......|..+++..++++++
T Consensus 163 ~~~g~~vvvD~a~~~~~~~~pl~~gaDivv~S~sK~l~G~~~~~~G~i~~~~~~~~~~l~~~~~~~g~~~sp~~a~l~lr 242 (382)
T TIGR02080 163 KAVGAVVVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVIAGAVIAKDPQVAEELAWWANNLGVTGGAFDSYLTLR 242 (382)
T ss_pred HHcCCEEEEECCCcccccCCchhhCCCEEEeecceeccCCCCceeEEEEeCCHHHHHHHHHHHHccCCCCCHHHHHHHHc
Confidence 99999999999998887666777789999999999999999999999988777788778777777788999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCccee
Q 016612 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSI 324 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi 324 (386)
+++.+..|+++..+|+..+.++|++++.++.+++|+++++|++.+..++..+.|++++|.+. +.+...+|++.++...+
T Consensus 243 ~l~tl~~R~~~~~~na~~~a~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~~ 322 (382)
T TIGR02080 243 GLRTLVARMRLQQRNAQAIVEYLQTQPLVKKIYYPGLPDHPGHEIAARQQKGFGAMLSFELKGGEQTVRRFLGGLSLFTL 322 (382)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEecCcHHHHHHHHHcCCcceE
Confidence 99999999999999999999999999999999999999999999988888889999999995 45667899999999999
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
..+.|+..+++++|+.++|..++++.+...|+.++.||+|+|+|+.+++++.|.++|+++
T Consensus 323 ~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~dl~~dl~~al~~~ 382 (382)
T TIGR02080 323 AESLGGVESLIAHPATMTHAAMGPEARAEAGISDTLLRLSVGLEDADDLIADLEQGLRAA 382 (382)
T ss_pred eccCCCCcceeECCCccCcccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 999999999999999999999999998999999999999999999999999999999763
No 10
>PRK07671 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=3e-51 Score=380.16 Aligned_cols=374 Identities=47% Similarity=0.784 Sum_probs=341.0
Q ss_pred ccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHH
Q 016612 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (386)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~ 87 (386)
+++.+++.|.. ...+|.+.||+++++++..++......+.|++.++|....+++.++++.|.+..+++++|++++.+++
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~g~~~~~~~~sG~aai~~~~ 82 (377)
T PRK07671 3 AKTKLIHGGIIGDPSTGAVSVPIYQVSTYKQEAVGKHQGYEYSRTGNPTRAALEELIAVLEGGHAGFAFGSGMAAITAVM 82 (377)
T ss_pred cccceeeCCCCCCCCCCCccCCccCCcceecCCCCCcCCCCcCCCCChHHHHHHHHHHHHhCCCceEEeCCHHHHHHHHH
Confidence 46788888844 34479999999999999877654445677999999999999999999999999999999998888777
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~ 167 (386)
.++++||+|++++|.|++....+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|+++|.++|++
T Consensus 83 ~~l~~Gd~Viv~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tklV~le~P~NPtg~~~dl~~I~~la~~ 162 (377)
T PRK07671 83 MLFSSGDHVILTDDVYGGTYRVMTKVLNRFGIEHTFVDTSNLEEVEEAIRPNTKAIYVETPTNPLLKITDIKKISTIAKE 162 (377)
T ss_pred HHhCCCCEEEECCCccchHHHHHHHHHhcCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCcccCHHHHHHHHHH
Confidence 78999999999999999777666667778999999999889999999999999999999999999999999999999999
Q ss_pred cCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC
Q 016612 168 HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (386)
Q Consensus 168 ~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
+|+++++|++|+.+....+...++|+++.|++|+++|++++.+|+++++++.+.+.+...+...+..+++..++++++++
T Consensus 163 ~g~~lvvD~a~~~~~~~~p~~~g~Divv~S~sK~l~G~~~~~~G~~v~~~~~l~~~~~~~~~~~g~~~~~~~a~l~~~~l 242 (377)
T PRK07671 163 KGLLTIVDNTFMTPYWQSPISLGADIVLHSATKYLGGHSDVVAGLVVVNSPELAEDLHFVQNSTGGILGPQDSWLLLRGL 242 (377)
T ss_pred cCCEEEEECCCCccccCChhhhCCeEEEecCcccccCCccceeEEEEeCcHHHHHHHHHHHHhhcCCCCHHHHHHHHcCc
Confidence 99999999999877766677789999999999999988877789888887778888888888888899999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccC
Q 016612 248 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 327 (386)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~ 327 (386)
+.+..|+++..+|+..+.++|++++.+..+.+|+++++|++.++.++..+.|++++|.+.+.+...++++.++.+.+..+
T Consensus 243 ~tl~~R~~~~~~na~~la~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~f~~~l~l~~~~~s 322 (377)
T PRK07671 243 KTLGIRMEEHETNSRAIAEFLNNHPAVNKVYYPGLPSHPNHELAKEQANGFGGMISFDVGSEETANKVLERLQYFTLAES 322 (377)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEeCCHHHHHHHHHhCCcceEccC
Confidence 99999999999999999999999999999999999999999998887788899999999777778899999999999999
Q ss_pred CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 328 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
.|+..+++++|+..+|..++.+++...|+.++.||+|+|+|+.+++++.|.++|+
T Consensus 323 ~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~ 377 (377)
T PRK07671 323 LGAVESLISIPSQMTHASIPADRRKELGITDGLIRISVGIEDGEDLIEDLAQALA 377 (377)
T ss_pred CCCCCeEeECCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999999999999999999984
No 11
>PRK08249 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=8.5e-51 Score=379.05 Aligned_cols=380 Identities=36% Similarity=0.627 Sum_probs=338.4
Q ss_pred CCCCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceE
Q 016612 4 EEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAL 74 (386)
Q Consensus 4 ~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i 74 (386)
++++.+++.+++.+.. ++..|.+.||++++++|..++.. ....+.|++.++|..+++++.++++.|.++.+
T Consensus 4 ~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i 83 (398)
T PRK08249 4 FNNAGVGTKAVWAGEKEYLPYGATQVPVVLSVAYGYDDIDEWYDVALGKKPGHIYSRNTNPTVQAFEEKVRILEGAEAAT 83 (398)
T ss_pred cccCCcccceeeCCCCCCCCCCCccCCccCCcceecCCHHHHHHhhcCCcCCccccCCCChHHHHHHHHHHHHhCCCeEE
Confidence 3566788999999854 34479999999999999765542 22346688999999999999999999999999
Q ss_pred EeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCc
Q 016612 75 CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQ 153 (386)
Q Consensus 75 ~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG 153 (386)
++++|++|+. ++.+++++||+|+++.+.|+++...+...+...|++++.++..|+++++++++++|++|++++|+||+|
T Consensus 84 ~~ssG~~Ai~~~l~all~~GD~Vi~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~d~e~l~~~i~~~tklV~ie~p~NPtg 163 (398)
T PRK08249 84 AFSTGMAAISNTLYTFLKPGDRVVSIKDTYGGTNKIFTEFLPRMGVDVTLCETGDHEQIEAEIAKGCDLLYLETPTNPTL 163 (398)
T ss_pred EeCChHHHHHHHHHHhcCCCCEEEEcCCchHHHHHHHHHHHhhCCeEEEEcCCCCHHHHHHhcCCCCeEEEEECCCCCCC
Confidence 9999999987 456789999999999999998877776667789999999998899999999999999999999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC
Q 016612 154 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (386)
Q Consensus 154 ~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~ 233 (386)
.+.|+++|.++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++...+|+++++ +++.+.+.......+.
T Consensus 164 ~v~dl~~I~~la~~~gi~livD~t~a~~~~~~~l~~~~Divv~S~sK~l~g~~~~~gG~vv~~-~~l~~~l~~~~~~~g~ 242 (398)
T PRK08249 164 KIVDIERLAAAAKKVGALVVVDNTFATPINQNPLALGADLVIHSATKFLSGHADALGGVVCGS-KELMEQVYHYREINGA 242 (398)
T ss_pred ccCCHHHHHHHHHHcCCEEEEECCcCccccCCchhhCCCEEeccCceecCCCCCceEEEEECC-HHHHHHHHHHHHhcCC
Confidence 999999999999999999999999997776666667899999999999987765557887764 5677777777777788
Q ss_pred CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhH
Q 016612 234 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALS 312 (386)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~ 312 (386)
.+++..+++++++++.+..|+++..++++.+.++|++++.++.+.+|+++++|++.+..++.++.|++++|.+. +.+..
T Consensus 243 ~~s~~~a~l~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~sf~~~~~~~~~ 322 (398)
T PRK08249 243 TMDPMSAYLILRGMKTLKLRVRQQQESAMALAKYLQTHPKVEAVYYPGLETHPNHEIAKAQMRGFGGILSFVLKGGMDTV 322 (398)
T ss_pred CCCHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCceEEEEEcCCHHHH
Confidence 89999999999999999999999999999999999999999999999999999999988877889999999994 55668
Q ss_pred HHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 313 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 313 ~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.++++.++...+..++|+..+++.+|+.++|..++.+++...|+.++.||+|+|+|+.+++++.|.++|+++
T Consensus 323 ~~f~~~l~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 394 (398)
T PRK08249 323 KRLLPKLRYAHRAANLGAVETIYGPARTTSHVENTLEERAALGIPEGLVRISVGIEDTEDLIADLEQAFAHL 394 (398)
T ss_pred HHHHHhCCcceEccCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 899999999999999999999999999999999999999999999999999999999999999999999864
No 12
>PRK08776 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=1.5e-50 Score=377.84 Aligned_cols=376 Identities=39% Similarity=0.648 Sum_probs=336.1
Q ss_pred ccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HH
Q 016612 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (386)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~ 86 (386)
.++.+++.|.. ++..|.+.||+..++.+..........+.|++.++|..+++++.++++.|.++.+++++|++++. ++
T Consensus 13 ~~t~~~~~~~~~~~~~~~~~~pi~~ss~~~~~~~~~~~~~~y~R~~~p~~~~Le~~lA~l~g~~~~v~~~sG~~Ai~~~l 92 (405)
T PRK08776 13 AATAAVRAGIDRDTAYGAVTPPIVLSSNFSFDGFGNKRQYDYTRSGNPTRDLLGEALAELEGGAGGVITATGMGAINLVL 92 (405)
T ss_pred ccchheeCCCCCCCCCCCccCCEeccceEEeCCCCcccCCcccCCCChHHHHHHHHHHHHhCCCceEEEcCHHHHHHHHH
Confidence 34678888844 33479999999999998765543334567888899999999999999999988999999999987 45
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHH
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~ 166 (386)
.+++++||+|+++.|.|+++...+...++..|++++.++..|++++++.+++++++|++++|+||+|.+.++++|.++|+
T Consensus 93 ~all~pGD~Vvv~~p~Y~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~l~~P~NPtG~v~dl~~I~~la~ 172 (405)
T PRK08776 93 NALLQPGDTLVVPHDAYGGSWRLFNALAKKGHFALITADLTDPRSLADALAQSPKLVLIETPSNPLLRITDLRFVIEAAH 172 (405)
T ss_pred HHHhCCCCEEEEccCCchHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCccCCHHHHHHHHH
Confidence 66899999999999999987766667677889999999988999999999889999999999999999999999999999
Q ss_pred HcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhc
Q 016612 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (386)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (386)
++|+++|+|++|+.+....+...++|+++.|++|+++|++++++|+++++++++.+.+.......+...+++.+++..++
T Consensus 173 ~~gi~vIvD~a~a~~~~~~pl~~gaDivv~S~tK~l~g~~~~~~G~vv~~~~~l~~~l~~~~~~~g~~~s~~~a~l~~~g 252 (405)
T PRK08776 173 KVGALTVVDNTFLSPALQKPLEFGADLVLHSTTKYINGHSDVVGGAVVARDAELHQQLVWWANALGLTGSPFDAFLTLRG 252 (405)
T ss_pred HcCCEEEEECCCcccccCCcccccCCEEEecCceeecCCCCceEEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHHHhh
Confidence 99999999999988776667778999999999999999988889999888777877776666666777899999999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCcceec
Q 016612 247 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSIT 325 (386)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~ 325 (386)
++.+..|+++..+|+..+.++|++++.+..+.+|+++++|++.++.++..+.|++++|.+. +.+...+|++.++...+.
T Consensus 253 l~tl~~r~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~ 332 (405)
T PRK08776 253 LRTLDARLRVHQENADAIAALLDGHAAVNQVYYPGLASHPGHALAARQQKGFGAMLSFELEGGEAAVRAFVDGLRYFTLA 332 (405)
T ss_pred hCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCcCHHHHHhcCCCCceEEEEEEcCCHHHHHHHHHhCCcceEc
Confidence 9999999999999999999999999999999999999999999988877889999999994 456678999999999999
Q ss_pred cCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 326 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 326 ~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.+.|+..+++++|+.++|..++++.+...|+.++.||+|+|.|+.+++++.|+++|+++
T Consensus 333 ~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~~ 391 (405)
T PRK08776 333 ESLGGVESLIAHPASMTHAAMTAEARAAAGISDGLLRLSVGIESAEDLLIDLRAGLARA 391 (405)
T ss_pred cCCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHHh
Confidence 99999999999999999999999998899999999999999999999999999999874
No 13
>PRK08114 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=9.1e-51 Score=373.96 Aligned_cols=376 Identities=26% Similarity=0.433 Sum_probs=329.6
Q ss_pred CCCCCccceeeccCCCCC-CCCCcccceeeeeeeecCCCC--------C-CCCccccCCCCchHHHHHHHHHhhcCCCce
Q 016612 4 EEEPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRA 73 (386)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~-~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~ 73 (386)
+.++.+++.+++.+...+ .+|.+.||++++++|..++.. . ...+.|+|.|+|.+..+++.++++.|.+.+
T Consensus 1 ~~~~~~~t~~~~~~~~~~~~~~~v~~pi~~sstf~f~~~~~~~~~~~~~~~~~~~YsR~~nPt~~~le~~la~LEg~~~a 80 (395)
T PRK08114 1 MTDKKLDTQLVNAGRSKKYTQGSVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQEAMCELEGGAGC 80 (395)
T ss_pred CCCCCcchheEeCCCCCCCCCCCccCCeeCCCceecCCHHHHHHhhccCcCCCccccCCCChhHHHHHHHHHHHhCCCeE
Confidence 346678888999885444 359999999999988664432 1 124679999999999999999999999999
Q ss_pred EEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCC
Q 016612 74 LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPR 152 (386)
Q Consensus 74 i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~npt 152 (386)
++++||++|++ ++++++++||+|++++..|+++...+...++.+|+++.+++..|.++++++++++|++|++++|+||+
T Consensus 81 ~~~~SGmaAi~~~~~~ll~~GD~Vv~~~~~Yg~t~~l~~~~l~~~Gi~v~~vd~~d~~~l~~~l~~~TrlV~~EtpsNp~ 160 (395)
T PRK08114 81 ALYPCGAAAVANAILAFVEQGDHVLMTGTAYEPTQDFCSKILSKLGVTTTWFDPLIGADIAKLIQPNTKVVFLESPGSIT 160 (395)
T ss_pred EEEhHHHHHHHHHHHHHcCCCCEEEEeCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCC
Confidence 99999999997 56778999999999999999998888777888999999999889999999999999999999999999
Q ss_pred cccccHHHHHHHHHHc--CCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh
Q 016612 153 QQICDIRKIAEMAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 230 (386)
Q Consensus 153 G~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~ 230 (386)
|.+.|+++|+++|+++ |+++++|.+++.|...++.++|+|+++.|.+|+++|++.+.+|+++.+ ++..+.+......
T Consensus 161 ~~v~DI~~Ia~ia~~~g~g~~lvVDnT~a~p~~~~pl~~GaDivv~S~tKyl~Ghsdv~~G~v~~~-~~~~~~l~~~~~~ 239 (395)
T PRK08114 161 MEVHDVPAIVAAVRSVNPDAVIMIDNTWAAGVLFKALDFGIDISIQAGTKYLVGHSDAMIGTAVAN-ARCWEQLRENSYL 239 (395)
T ss_pred CEeecHHHHHHHHHHhCCCCEEEEECCCccccccCHHHcCCcEEEEcCcccccCCCcceeEEEEcC-HHHHHHHHHHHHh
Confidence 9999999999999998 499999999999999999999999999999999999998889988765 4465556666667
Q ss_pred cCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--
Q 016612 231 EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-- 308 (386)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-- 308 (386)
.|..+++..+|++.++++.+..|+++..+|+..+.++|++++.++++++|+++++|+++++.++.++.|++++|.+.+
T Consensus 240 ~G~~~~p~~a~l~~rgl~TL~lR~~~~~~na~~va~~L~~hp~V~~V~yPgl~~~p~~~~~~~~~~g~gg~~sf~l~~~~ 319 (395)
T PRK08114 240 MGQMVDADTAYMTSRGLRTLGVRLRQHEESSLKVAEWLAEHPEVARVNHPALPGCKGHEFWKRDFTGSSGLFSFVLKKKL 319 (395)
T ss_pred ccCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCccHHHHHhhCCCCceEEEEEecCcc
Confidence 789999999999999999999999999999999999999999999999999999999999888778889999999954
Q ss_pred -HHhHHHHHhhcCcceeccCCCCccccccc--cccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 309 -LALSKHVVETTKYFSITVSFGSVKSLISM--PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 309 -~~~~~~l~~~l~~~gi~~~~G~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.+...++++.++.+.+..+.|+..+++.+ |....+.. +.++ .+..++.||+|+|.|+.+++++.|.++|++.
T Consensus 320 ~~~~~~~f~~~l~l~~~a~SlGg~~SLi~~~~~~~~~~~~-~~~~---~~~~~~liRlSvGlEd~~DLi~Dl~~Al~~~ 394 (395)
T PRK08114 320 TDEQLANYLDNFSLFSMAYSWGGFESLILANQPEEIAAIR-PAGE---VDFTGTLIRLHIGLEDVDDLIADLAAGFARI 394 (395)
T ss_pred cHHHHHHHHHhCCcceeecccCCccceeccCCchhhhccC-ChhH---hcCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 56788999999999999999999999984 44444433 3322 2445699999999999999999999999763
No 14
>PRK09028 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.5e-50 Score=373.90 Aligned_cols=371 Identities=27% Similarity=0.480 Sum_probs=325.7
Q ss_pred ccceeeccCCCCC-CCCCcccceeeeeeeecCCCC--------C-CCCccccCCCCchHHHHHHHHHhhcCCCceEEeCc
Q 016612 9 VSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (386)
Q Consensus 9 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~-~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~ 78 (386)
+++++++.+...+ .+|.+.||+++++++..+... . ...+.|++.++|...++++.++++.+.+++++++|
T Consensus 5 ~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~~Y~r~~npt~~~Le~~iA~le~~~~~~~~~s 84 (394)
T PRK09028 5 KATKIVSAGRDKKWTKGVINPPVFRASTVVFDTVAEMRHAAKNRANGEMFYGRRGTPTHFAFQAAIVELEGGAGTALYPS 84 (394)
T ss_pred ccceeEEcCCCCCCCCCCccCCeeCCCCcccCCHHHHHHHhccCccCCceecCCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 5688889884344 359999999999998654321 1 13467999999999999999999998888999999
Q ss_pred HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 79 gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
|++|++ ++.+++++||+|+++++.|+++...+...+...|+++..++..+.+++++.++++|++|++++|+||+|.+.|
T Consensus 85 G~~Ai~~~l~all~~GD~Vvv~~~~Y~~t~~l~~~~l~~~Gi~v~~v~~~~~e~l~~~l~~~TklV~lespsNPtg~v~d 164 (394)
T PRK09028 85 GAAAISNALLSFLKAGDHLLMVDSCYEPTRDLCDKILKGFGIETTYYDPMIGEGIRELIRPNTKVLFLESPGSITMEVQD 164 (394)
T ss_pred HHHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHhhhhcceEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCcHHH
Confidence 999987 5677899999999999999988776656667899999999887888999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCCh
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 237 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (386)
+++|+++|+++|+++++|++|+.+....|.+.|+|+++.|++||++|++++++|+++.+ +++.+.+.......|..+++
T Consensus 165 l~~I~~la~~~g~~lvvD~t~a~p~~~~Pl~~GaDivv~S~tK~l~Gh~d~~~G~~~~~-~~~~~~l~~~~~~~G~~~~p 243 (394)
T PRK09028 165 VPTLSRIAHEHDIVVMLDNTWASPINSRPFEMGVDISIQAATKYIVGHSDVMLGTATAN-EKHWDQLREHSYLMGQCTSP 243 (394)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCccccCceEEEEeCCeEecCCCCEEEEEEECC-HHHHHHHHHHHHhcCCCCCH
Confidence 99999999999999999999999988889999999999999999999999999987654 55656566666677889999
Q ss_pred hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--CHHhHHHH
Q 016612 238 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHV 315 (386)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~l 315 (386)
..+|++.++++.+..|+++..+|+..+.++|++++.++.+++|+++++|++.++.++.++.|++++|.++ +.+...+|
T Consensus 244 ~~a~l~~rgl~TL~lR~~~~~~na~~la~~L~~~p~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~f 323 (394)
T PRK09028 244 DDVYLAMRGLRTLGVRLAQHEKNALKVANWLATRPEVDHVRHPAFETCPGHEFFKRDFSGSNGLFSFVLKQGDPKAVTAL 323 (394)
T ss_pred HHHHHHHcccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999998887888999999996 45678899
Q ss_pred HhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 316 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
++.++...+..+.|+..+++.+|+.+++... ....+..++.||+|+|+|+.+++++.|.++|++.
T Consensus 324 ~~~l~l~~~~~slG~~~sLv~~p~~~~~~~~----~~~~~~~~~liR~svGlEd~~dLi~Dl~~Al~~~ 388 (394)
T PRK09028 324 VEGMQHFKMGFSWGGFESLILGVFGINKLRT----ATNWDFSKPLIRLHIGLEDVDDLIADLEAGFERY 388 (394)
T ss_pred HHhCCcceEecccCCCcceeECCCCcCccCc----hhhhcCCCCeEEEEeCcCCHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987765433 2235666789999999999999999999999864
No 15
>KOG0053 consensus Cystathionine beta-lyases/cystathionine gamma-synthases [Amino acid transport and metabolism]
Probab=100.00 E-value=6.3e-51 Score=363.16 Aligned_cols=376 Identities=46% Similarity=0.700 Sum_probs=347.8
Q ss_pred ccceeeccCCCCCC--CCCccccee--eeeeeecC-CC-CCCC---CccccCCCCchHHHHHHHHHhhcCCCceEEeCcH
Q 016612 9 VSTLLMNFSNEFDP--YGALSTPLY--QTATFKQP-SA-TENG---PYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (386)
Q Consensus 9 ~~~~~~~~~~~~~~--~g~~~~~~~--~~~~~~~~-~~-~~~~---~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (386)
+.+..++.++.++. .+.+.+|+. .++.|.+. .- .... .+.|++.|+|.+..+++.++++.|++..++++||
T Consensus 22 ~~t~~~~~g~~~~~~~~~~v~~pI~~~~s~tfk~~~~~~~~~~~~~~~~Ysr~~nPt~~~le~~iaal~ga~~~l~fsSG 101 (409)
T KOG0053|consen 22 LDTNLLHAGQDPEKAIHNAVAPPIYATLSTTFKQDLNEGEHGGNLDGYDYSRSGNPTRDVLESGIAALEGAAHALLFSSG 101 (409)
T ss_pred cchhhhhcccccchhccccccCceecccceeecccCccccccccccccccccCCCCchHHHHHHHHHHhCCceEEEeccc
Confidence 77899999988888 799999999 67777764 22 2222 2789999999999999999999999999999999
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
++|+. ++..++++|++++..+..|.++...++.....+|++..++++++++++++.+++++++|++++|.||+..+.|+
T Consensus 102 maA~~~al~~L~~~g~~iV~~~~~Y~gT~~~l~~~~~~~gie~~~vd~~~~~~~~~~i~~~t~~V~~ESPsNPll~v~DI 181 (409)
T KOG0053|consen 102 MAAITVALLHLLPAGDHIVATGDVYGGTLRILRKFLPKFGGEGDFVDVDDLKKILKAIKENTKAVFLESPSNPLLKVPDI 181 (409)
T ss_pred HHHHHHHHHHhcCCCCcEEEeCCCcccHHHHHHHHHHHhCceeeeechhhHHHHHHhhccCceEEEEECCCCCccccccH
Confidence 98886 67778999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChh
Q 016612 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 238 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (386)
++|+++|+++|+++++|++++.+...+++..|+||++.|.+|+++|++.+++|.++.+.+++.+.+...+...++..++.
T Consensus 182 ~~l~~la~~~g~~vvVDnTf~~p~~~~pL~lGADIV~hSaTKyi~Ghsdvi~G~iv~n~~~~~~~l~~~~~~lg~~~~p~ 261 (409)
T KOG0053|consen 182 EKLARLAHKYGFLVVVDNTFGSPYNQDPLPLGADIVVHSATKYIGGHSDVIGGSVVLNSEELASRLKFLQEDLGWCEDPF 261 (409)
T ss_pred HHHHHHHhhCCCEEEEeCCcCcccccChhhcCCCEEEEeeeeeecCCcceeeeEEecCcHHHHHHHHHHHHHhcCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999988889999999999999999999
Q ss_pred hHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCHHhHHHHHh
Q 016612 239 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVE 317 (386)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~l~~ 317 (386)
.++...++++.+..|+++..+++..+..++++.+.++.+++++|+++|.++......++.++ ++.+...+.+...++++
T Consensus 262 ~~~ll~Rglktl~lRi~~~~ena~~~A~~Le~~~~v~kv~YPgL~Shp~h~~~~~~~~g~~G~l~~~~~~~~~~a~kf~~ 341 (409)
T KOG0053|consen 262 DLFLLSRGLKTLHLRINKHSENALKIALLLEAHPKVKKVYYPGLPSHPNHELAKRQKKGGYGGLSSVIFGNEEHAKKFYD 341 (409)
T ss_pred HHHHHhcCcchhhhhHHHHHHHHHHHHHHhhhCCceeEEEcCCCCCCccHHHHHhhhcCCcceEEEEEcCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998876655444 55555688888999999
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 385 (386)
.++.+-...+.|+..+++++|+.++|.. +.+++.+.|+.++.||+|+|.|+.+++++.+.+||+++.
T Consensus 342 ~LK~~~~a~SlG~~eSL~~~p~~mth~~-~~e~~~~~Gi~~~LVRvSVGiEd~~dL~~d~~~Al~~~~ 408 (409)
T KOG0053|consen 342 ALKLFTKAPSLGGNESLAEPPAIMTHAS-ELEEREKFGIDPNLVRVSVGIEDIEDLIKDFQQALEKAK 408 (409)
T ss_pred hhhhhhcccCcCccchhhcchhhhccCC-CHHHHHhcCCCCCcEEEEeccCCHHHHHHHHHHHHHhhc
Confidence 9999989999999999999999999999 999999999999999999999999999999999998763
No 16
>PRK08248 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=2.1e-50 Score=378.93 Aligned_cols=384 Identities=38% Similarity=0.603 Sum_probs=334.7
Q ss_pred CCCCCCCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCC
Q 016612 1 MSVEEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKAD 71 (386)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~ 71 (386)
|+-.++..+++..++.|.. ++.+|++.+|++++++|..++.. ....+.|++.++|....+++.++++.|.+
T Consensus 1 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~leg~~ 80 (431)
T PRK08248 1 MSEERTFRLETLAIHAGQEIDPTTGSRAVPIYQTTSYGFRDSEHAANLFSLKEFGNIYTRIMNPTTDVFEKRIAALEGGI 80 (431)
T ss_pred CcccccCCcchhheeCCcCCCCCCCCccCCeeCCCccccCCHHHHHhhhccccCCceeECCCCchHHHHHHHHHHHhCCC
Confidence 4444555667889999854 34479999999999999765432 12345689999999999999999999999
Q ss_pred ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 72 RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 72 ~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
+.++++||++|+. ++.+++++||+|+++++.|+++...+...++..|++++.++..|++++++++++++++|++++|+|
T Consensus 81 ~al~~~sG~~Ai~~al~~ll~~GD~Vlv~~~~y~~t~~~~~~~~~~~Gv~v~~vd~~d~e~l~~ai~~~tklV~l~sp~N 160 (431)
T PRK08248 81 GALAVSSGQAAITYSILNIASAGDEIVSSSSLYGGTYNLFAHTLPKLGITVKFVDPSDPENFEAAITDKTKALFAETIGN 160 (431)
T ss_pred cEEEECCHHHHHHHHHHHHhCCCCEEEEccCchhhHHHHHHHHHHhCCEEEEEECCCCHHHHHHhcCCCCeEEEEECCCC
Confidence 9999999999986 667789999999999999998887777778899999999999999999999999999999999999
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhH----------
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL---------- 220 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~---------- 220 (386)
|||.+.|+++|.++|+++|+++|+|++++.+....+.+.++|+++.|++|+++|++...+|+++.+.+..
T Consensus 161 PtG~v~di~~I~~la~~~gi~vIvD~t~a~~~~~~pl~~gaDivv~S~tK~lgg~g~~~Gg~v~~~~~~~~~~~~~~~~~ 240 (431)
T PRK08248 161 PKGDVLDIEAVAAIAHEHGIPLIVDNTFASPYLLRPIEHGADIVVHSATKFIGGHGTSIGGVIVDSGKFDWKGSGKFPGL 240 (431)
T ss_pred CCCcccCHHHHHHHHHHcCCEEEEeCCCCccccCChhHcCCCEEEEcCccccCCCCCceEEEEEeCCccccccccccccc
Confidence 9999999999999999999999999999877766677789999999999999887665666666543211
Q ss_pred ----------------------HHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEe
Q 016612 221 ----------------------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVN 278 (386)
Q Consensus 221 ----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 278 (386)
.+.........|..+++..+|+++++++.+..|+++..+++..+.++|++++.++.++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tl~~R~~~~~~nA~~la~~L~~~p~v~~V~ 320 (431)
T PRK08248 241 TEPDPSYHGLVYTDAVGEAAYITKARVQLLRDLGAALSPFNSFLLLQGLETLHLRMERHSENALAVAKFLEEHEAVEWVS 320 (431)
T ss_pred cCCccccccchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCcceEE
Confidence 1112234456688999999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCchhhhhhcc-CCCCceEEEEe-CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 279 YAGLPEHPGHELHYSQA-KGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 279 ~~~l~~~~~~~i~~~~~-~~~~~~~~~~~-~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+|+++++|.+.+..++. .+.|++++|.+ ++.+...+|++.++......+.|+..+++++|+.++|..++.+.+...|+
T Consensus 321 yPgl~s~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi 400 (431)
T PRK08248 321 YPGLPSHPSYELAKKYLPKGQGAILTFGIKGGVEAGKKLIDSVKLFSHLANVGDSKSLIIHPASTTHQQLSEEEQLAAGV 400 (431)
T ss_pred CCCCCCCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCeeeeCCCcCccccCCHHHHHhcCC
Confidence 99999999999887654 57899999999 45567889999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 357 TEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 357 ~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.++.||+|+|+|+.+++++.|.++|++.
T Consensus 401 ~~~liRlsvGlEd~~dL~~Dl~~Al~~~ 428 (431)
T PRK08248 401 TPGLVRLSVGTEAIDDILDDLRQAIRQS 428 (431)
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999864
No 17
>PRK08574 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=3.9e-50 Score=373.37 Aligned_cols=373 Identities=41% Similarity=0.608 Sum_probs=331.2
Q ss_pred ccceeeccCCCCCCCCCcccceeeeeeeecCCCC----CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH
Q 016612 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT----ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA 84 (386)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~ 84 (386)
.++.+++.+..++.+|++.||++++++|..++.. ....+.|++.++|..+++|+.+++++|.++.+++++|++|+.
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~y~r~~np~~~~lE~~lA~l~g~~~~l~~~sG~~Ai~ 82 (385)
T PRK08574 3 RGTDAVRGYRGSDPYGSLQPPIYLTALFRQEGEAYPSDRGFDLKYSREENPTLRPLEEALAKLEGGVDALAFNSGMAAIS 82 (385)
T ss_pred ccceeeecCCCCCCCCCccCCccCCcceecCcchhhcCCcCCceEECCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHH
Confidence 4567788775566789999999999999765431 223466999999999999999999999999999999999986
Q ss_pred -HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHH
Q 016612 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
++.+++++||+|+++.+.|+++...+..+ ...|++++.++. |++++++++++ ++++|++++|+||+|.+.|+++|.
T Consensus 83 ~~l~~ll~~GD~Vlv~~~~y~~~~~~~~~~-~~~g~~v~~~~~-d~~~l~~~i~~~~tklV~ie~p~NPtG~v~dl~~I~ 160 (385)
T PRK08574 83 TLFFSLLKAGDRVVLPMEAYGTTLRLLKSL-EKFGVKVVLAYP-STEDIIEAIKEGRTKLVFIETMTNPTLKVIDVPEVA 160 (385)
T ss_pred HHHHHHhCCCCEEEEcCCCchhHHHHHHHh-hccCcEEEEECC-CHHHHHHhcCccCceEEEEECCCCCCCEecCHHHHH
Confidence 56678999999999999999987666543 678999888765 68999999987 999999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 163 EMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
++|+++|+++|+|++++.+....+...|+|+++.|++|+++|+++..+|+++++++++.+.+.......+..+++..+++
T Consensus 161 ~la~~~gi~livD~t~a~~~~~~~l~~GaDivv~S~sK~l~g~~d~~gG~vi~~~~~~~~~~~~~~~~~g~~~~p~~a~l 240 (385)
T PRK08574 161 KAAKELGAILVVDNTFATPLLYRPLRHGADFVVHSLTKYIAGHNDVVGGVAVAWSGEFLEELWEWRRRLGTIMQPFEAYL 240 (385)
T ss_pred HHHHHcCCEEEEECCCCccccCChhhhCCcEEEeeCceeecCCCCceeEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 99999999999999999887766777899999999999999887767887777777787777766666788889999999
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccC--CCCceEEEEeC-CHHhHHHHHhhc
Q 016612 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK--GAGSVLSFLTG-SLALSKHVVETT 319 (386)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~--~~~~~~~~~~~-~~~~~~~l~~~l 319 (386)
++++++.+..|+++..+++..+.++|++++.+..+.+|+++++|.+.+..++.+ +.|++++|.+. +.+...+|++.+
T Consensus 241 ~l~~l~tL~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~l 320 (385)
T PRK08574 241 VLRGLKTLEVRFERQCRNAMAIAEFLSEHPKVAEVYYPGLPSDPYHGVAKRLFGKDLYGGVVSFRVKGGRDAVLKFLRSL 320 (385)
T ss_pred HHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcCEEECCCCCCCchHHHHHHhCCCCCcceEEEEEeCCCHHHHHHHHHcC
Confidence 999999999999999999999999999999999999999999999998877654 68999999994 567788999999
Q ss_pred CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 320 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 320 ~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
+...+..+.|+..+++++|+..+|..++.+++...|+.++.||+|+|+|+.+++++.|.++|++
T Consensus 321 ~l~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dli~dl~~al~~ 384 (385)
T PRK08574 321 KLIKPSPSLGGVESLATYPVKSAASPIPEEDRKALGITEDLVRLSVGLEDVEDLIEDLDQALGS 384 (385)
T ss_pred CcceEccCCCCCcceeeCCCcCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999999999975
No 18
>PRK06702 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1e-49 Score=371.17 Aligned_cols=379 Identities=33% Similarity=0.511 Sum_probs=334.3
Q ss_pred CCCCccceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 016612 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (386)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (386)
+.-.+++..++.|..++..|++.||++++++|..++.. ....+.|++.|+|.++++|+.++++.|.+.++++
T Consensus 3 ~~~~~~t~~~~~g~~~~~~~~~~~PI~~sst~~f~~~~~~~~~~~~~~~g~~ysR~~nPtv~~lE~~la~leg~~~av~~ 82 (432)
T PRK06702 3 ESWGKGTICVQGGYTPKNGEPRVLPLYQSTTYKYDTSDDLAALFNLEAEGYIYTRIGNPTLAAFEQKLAELEGGVGAVAT 82 (432)
T ss_pred CCCCcchHheeCCCCCCCCCCccCCccCCcceecCCHHHHHHHHhccccCceeECCCCcHHHHHHHHHHHHhCCCcEEEE
Confidence 34456788999885445579999999999999775532 1234568888889999999999999999999999
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhhCCCceEEEEeCCCCCCcc
Q 016612 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 77 ~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~~~~~~v~~~~~~nptG~ 154 (386)
+||++|+. ++++++++||+|+++.+.|.++...+...+...|+++++++.. |+++++++++++|++|++++|+||++.
T Consensus 83 ~SG~aAi~~al~all~~GD~VI~~~~~Y~~T~~~~~~~l~~~Gi~v~~vd~~~d~~~l~~~I~~~Tk~I~~e~pgnP~~~ 162 (432)
T PRK06702 83 ASGQAAIMLAVLNICSSGDHLLCSSTVYGGTFNLFGVSLRKLGIDVTFFNPNLTADEIVALANDKTKLVYAESLGNPAMN 162 (432)
T ss_pred CCHHHHHHHHHHHhcCCCCEEEECCCchHHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHhCCcCCeEEEEEcCCCcccc
Confidence 99999997 5667899999999999999999877666678899999999984 999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcCh---------hH-----
Q 016612 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE---------RL----- 220 (386)
Q Consensus 155 ~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~---------~~----- 220 (386)
+.|+++|+++|+++|+++++|++++.|.+..+.+.|+||++.|++|+++|+++..+|.++.... .+
T Consensus 163 v~Di~~I~~iA~~~gi~livD~T~~tP~~~~pl~~GADIvv~S~TKy~~Ghsd~l~G~v~~~~~~~w~~~~~~~l~~~~~ 242 (432)
T PRK06702 163 VLNFKEFSDAAKELEVPFIVDNTLATPYLCQAFEHGANIIVHSTTKYIDGHASSLGGIVIDGGNFDWTNGKYPELVEPDP 242 (432)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCCchhhCChhhcCCCEEEEccccccCCCcceeceEEEeCCCcccccccccccccccc
Confidence 9999999999999999999999999998888999999999999999999999998988874221 11
Q ss_pred -----------------HHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCC
Q 016612 221 -----------------AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 283 (386)
Q Consensus 221 -----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 283 (386)
.+.........+..++++.+++++++++.+..|+++..+|+..+.++|++++.+..+.+|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~sp~~a~l~~rgL~Tl~lR~~r~~~Na~~la~~L~~~p~V~~V~yPgl~ 322 (432)
T PRK06702 243 SYHGVSYVQNFGAAAYIVKARVQLLRDYGNCMSPFNAYISNIGLETLHLRMERHSENALAVAKWLADHERIEWVNYPGLD 322 (432)
T ss_pred cccccchhhccchhhHHHHHHHHHHHHccCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHhCCCcceEECCCCC
Confidence 111122334556799999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhcc-CCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeE
Q 016612 284 EHPGHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 361 (386)
Q Consensus 284 ~~~~~~i~~~~~-~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 361 (386)
++|.+.+..++. .+.|++++|.+. +.+.+.++++.++.+.+..+.|+..+++.+|+.++|..++.+.+...|+.++.|
T Consensus 323 ~~p~~~l~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slGg~~Slv~~p~~~th~~~~~~~~~~~Gi~~~li 402 (432)
T PRK06702 323 SNENYSLAQKYLKKGASGVLTFGIKGGLEAAKEFIANVKLATLVTHVADARTCVIHPASTTHRQLSAEDQRLAGVTSDLI 402 (432)
T ss_pred CCccHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCccceeccccCCCCcceECCCCCCcccCCHHHHHhcCCCCCeE
Confidence 999999887766 678999999994 567788999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCChHHHHHHHHHHHhc
Q 016612 362 RISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 362 Ris~~~~~~~~~i~~l~~~l~~ 383 (386)
|+|+|+|+.+++++.|.++|+-
T Consensus 403 RlSvGlEd~eDLi~Dl~~Al~~ 424 (432)
T PRK06702 403 RLSVGIEDVSDIIADLEAALVG 424 (432)
T ss_pred EEEeccCCHHHHHHHHHHHHhc
Confidence 9999999999999999999964
No 19
>PRK07504 O-succinylhomoserine sulfhydrylase; Reviewed
Probab=100.00 E-value=1.5e-49 Score=371.33 Aligned_cols=379 Identities=34% Similarity=0.555 Sum_probs=333.8
Q ss_pred CCccceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCc
Q 016612 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (386)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~ 78 (386)
-++++..++.|...+.++...+|++.++.+..+... ....+.|++.++|...++++.++++.|.+..+++++
T Consensus 9 ~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~Le~~lA~l~G~~~~~~~~s 88 (398)
T PRK07504 9 WRPATRLVHSGTLRSQFGETSEALFLTQGFVYDTAEAAEARFKGEDPGFIYSRYSNPTVDMFEKRMCALEGAEDARATAS 88 (398)
T ss_pred CCcccceeeCCCCCCCCCCCcCCeECCCCccCCCHHHHHHHhccCcCCceeecCCCchHHHHHHHHHHHhCCCeeeEecC
Confidence 345688899885556689999999998887654321 233466888888999999999999999998888999
Q ss_pred HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 79 gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
|++++. ++..++++||+|+++++.|+++...+...+...|++++.++..|+++++++++++|++|++++|+||+|.+.|
T Consensus 89 G~~Ai~~~l~~~l~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~ai~~~tklV~lesp~NptG~v~d 168 (398)
T PRK07504 89 GMAAVTAAILCQVKAGDHVVAARALFGSCRYVVETLLPRYGIESTLVDGLDLDNWEKAVRPNTKVFFLESPTNPTLEVID 168 (398)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCchhHHHHHHHHHHhhcCeEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCcEecC
Confidence 998886 5666889999999999999988776666677889999999988999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCCh
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 237 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (386)
+++|.++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++...+|+++++++.+.+.+.......+..+++
T Consensus 169 l~~I~~la~~~gi~lvvD~a~a~~~~~~~~~~gaDivv~S~sK~l~g~g~~~GG~vv~~~~~i~~~~~~~~~~~g~~~s~ 248 (398)
T PRK07504 169 IAAVAKIANQAGAKLVVDNVFATPLFQKPLELGAHIVVYSATKHIDGQGRCLGGVVLSDKAWIEEHLQDYFRHTGPSLSP 248 (398)
T ss_pred HHHHHHHHHHcCCEEEEECCccccccCCchhhCCCEEEeeccccccCCccceEEEEEeCcHHHHHHHHHHHHHhCCCCCH
Confidence 99999999999999999999998877777778999999999999987654456788877655555555545556778999
Q ss_pred hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHH
Q 016612 238 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVV 316 (386)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~ 316 (386)
..+++++++++.+..|+++..++++.+.++|++++.+..+.+|+++++|++.+..++.++.|++++|.+. +.+...+|+
T Consensus 249 ~~A~~~l~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~~~ 328 (398)
T PRK07504 249 FNAWTLLKGLETLPVRVRQQTESAAAIADFLAGHPKVARVIYPGRADHPQADIIAKQMTGGSTLVAFELKGGKEAAFRFL 328 (398)
T ss_pred HHHHHHHhccchHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHHhCCCCccEEEEEeCCCHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999887777788999999994 567788999
Q ss_pred hhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 016612 317 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 317 ~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 385 (386)
+.++...+..+.|+..+++.+|+.++|..++++.+...|+.++.||+|+|+|+.+++++.|.++|+++.
T Consensus 329 ~~l~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~~ 397 (398)
T PRK07504 329 NALKIVRISNNLGDAKSLITHPATTTHKNLSPEARAELGISEGFLRLSAGLEDTDDLIEDLAAALKKVR 397 (398)
T ss_pred HhCCcceecccCCCCCeeeeCCCCCCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhhh
Confidence 999999999999999999999999999999999999999999999999999999999999999998753
No 20
>PRK05967 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.2e-49 Score=367.13 Aligned_cols=371 Identities=30% Similarity=0.481 Sum_probs=326.6
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCC----CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHH
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT----ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~a 82 (386)
.+++++++.|.. +++.|.+.||++++++|..++.. ....+.|++.|+|.++.+++.++.+.+.+..++++||++|
T Consensus 12 ~~~t~~~~~~~~~~~~~~~~~~Pi~~sst~~~~~~~~~~~~~~~y~YsR~gnPt~~~Le~~la~le~~~~~v~~sSG~aA 91 (395)
T PRK05967 12 GINTRLAHDGNDPGDYHGFVNPPVVHASTVLFPDAETMATRGQKYTYGTRGTPTTDALCKAIDALEGSAGTILVPSGLAA 91 (395)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCCcceecCChHHhhcccCCCccCCCCChHHHHHHHHHHHHhCCCCEEEECcHHHH
Confidence 356888998854 44579999999999999765542 2335779988999999999999999988889999999999
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHH
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
+. ++++++++||+|+++++.|+++...+...++..|+++.+++..+.++++++++++|++|++++|+||++.+.|+++|
T Consensus 92 i~~~l~all~~GD~Vlv~~~~Y~~~~~l~~~~l~~~Gi~v~~vd~~~~e~l~~al~~~TklV~lesPsNP~l~v~dl~~I 171 (395)
T PRK05967 92 VTVPFLGFLSPGDHALIVDSVYYPTRHFCDTMLKRLGVEVEYYDPEIGAGIAKLMRPNTKVVHTEAPGSNTFEMQDIPAI 171 (395)
T ss_pred HHHHHHHhcCCCCEEEEccCCcHHHHHHHHHHHHhcCeEEEEeCCCCHHHHHHhcCcCceEEEEECCCCCCCcHHHHHHH
Confidence 87 56779999999999999999998776677889999999998878888999999999999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHH
Q 016612 162 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 241 (386)
Q Consensus 162 ~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (386)
+++|+++|+++++|++++.+....+++.|+|+++.|++|+++|++++++|+++.+ +++.+.+.......|..+++..+|
T Consensus 172 ~~la~~~g~~vvVD~t~a~p~~~~pl~~GaDivv~S~tKy~~Gh~d~~~G~v~~~-~~~~~~l~~~~~~~G~~~~p~da~ 250 (395)
T PRK05967 172 AEAAHRHGAIVMMDNTWATPLYFRPLDFGVDISIHAATKYPSGHSDILLGTVSAN-EKCWPQLLEAHGTLGLCAGPDDTY 250 (395)
T ss_pred HHHHHHhCCEEEEECCccCceecChhHcCCCEEEEecccccCCCCCeeEEEEEcC-HHHHHHHHHHHHHcCCCCCHHHHH
Confidence 9999999999999999999988899999999999999999999999999988765 456555665666678899999999
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-----CHHhHHHHH
Q 016612 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-----SLALSKHVV 316 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~~~~~l~ 316 (386)
+++++++.+..|+++..+|+..+.++|++++.++.+++|+|+++|++++..++..+.|++++|.++ +.+.+.+|+
T Consensus 251 l~~rgl~Tl~lR~~~~~~na~~lA~~L~~hp~v~~V~yPgl~s~p~~~~~~~~~~g~gg~~sf~l~~~~~~~~~~~~~f~ 330 (395)
T PRK05967 251 QILRGLRTMGIRLEHHRKSALEIARWLEGRPDVARVLHPALPSFPGHEIWKRDFSGASGIFSFVLAAGPEKGKAKAHAFL 330 (395)
T ss_pred HHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCCcEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCCcccHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998877889999999995 257788999
Q ss_pred hhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 016612 317 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 317 ~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 385 (386)
+.++...+..+.|+..++++++ .+ +.+.+...+..++.||||+|+|+.+++++.|.++|+++.
T Consensus 331 ~~l~l~~~~~slG~~~sLi~~~-~~-----~~~~~~~~~~~~~liRlSvGlEd~~dLi~Dl~~Al~~~~ 393 (395)
T PRK05967 331 DALEIFGLGYSWGGYESLALHV-KL-----GDRTVAKAPYAGPVIRLQIGLEDVPDLKADLERGFAAAS 393 (395)
T ss_pred HhCCcceEccCCCCcceeeeeC-CC-----ChhHhhhccCCCCeEEEEeccCCHHHHHHHHHHHHHhhh
Confidence 9999999999999999998763 22 333333346667899999999999999999999998764
No 21
>PRK07810 O-succinylhomoserine sulfhydrylase; Provisional
Probab=100.00 E-value=1.5e-49 Score=371.20 Aligned_cols=373 Identities=35% Similarity=0.556 Sum_probs=333.4
Q ss_pred ccceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHH
Q 016612 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGM 80 (386)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt 80 (386)
+++.+++.+..++.+|.+.+|+++++++..++.. ....+.|++.++|..+++++.++++.|.++.+++++|+
T Consensus 16 ~~t~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~al~~~sG~ 95 (403)
T PRK07810 16 QATIGVRGGLLRSGFEETAEALYLTSGYVYESAAAAEAAFTGELDRFVYSRYGNPTVSMFEERLRLIEGAEACFATASGM 95 (403)
T ss_pred cchhheeCCCCCCCCCCccCCccCCCccccCCHHHHHHHhccCcCCcceeCCCCchHHHHHHHHHHHhCCCcEEEECChH
Confidence 4678899885556678999999999988654431 12345589999999999999999999999999999999
Q ss_pred HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHH
Q 016612 81 AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 81 ~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~ 159 (386)
+|+. ++.+++++||+|++++..|+++...+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|++
T Consensus 96 ~Ai~~~l~all~~Gd~Vl~~~~~~~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~~esp~Nptg~v~dl~ 175 (403)
T PRK07810 96 SAVFTALGALLGAGDRLVAARSLFGSCFVVCNEILPRWGVETVFVDGEDLSQWEEALSVPTQAVFFETPSNPMQSLVDIA 175 (403)
T ss_pred HHHHHHHHHHhCCCCEEEEccCCcchHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCceEEEEECCCCCCCeecCHH
Confidence 9986 556789999999999989988877777778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhh
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 239 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (386)
+|.++|+++|+++|+|++|+.+....+...++|+++.|++|+++|+++..+|+++++++.+.+.++......+..+++..
T Consensus 176 ~I~~la~~~g~~vivD~a~a~~~~~~~~~~gaDivv~S~tK~l~g~g~~~gG~v~~~~~~~~~~l~~~~~~~g~~~s~~~ 255 (403)
T PRK07810 176 AVSELAHAAGAKVVLDNVFATPLLQRGLPLGADVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPALSAFN 255 (403)
T ss_pred HHHHHHHHcCCEEEEECCCCccccCChhhcCCcEEEccCCceecCCcCceeEEEEeChHHHHHHHHHHHHHhCCCCCHHH
Confidence 99999999999999999999888777777899999999999998877666799998866555555555556677899999
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-----HHhHHH
Q 016612 240 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSKH 314 (386)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~ 314 (386)
+++++++++.+..|+++..+++..+.++|++++.+..+.+|+++++|++.++.++.++.|++++|.+.+ .+...+
T Consensus 256 a~l~l~~L~tl~~R~~~~~~~a~~~a~~L~~~p~v~~V~yP~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~~~~~ 335 (403)
T PRK07810 256 AWVLLKGLETLALRVRHSNASALRIAEFLEGHPAVRWVRYPFLPSHPQYDLAKRQMSGGGTVVTFELDAPEDAAKKRAFE 335 (403)
T ss_pred HHHHHhccCcHHHHHHHHHHHHHHHHHHHhcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCCCcCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988888889999999953 566789
Q ss_pred HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 016612 315 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 315 l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
|++.++...+..++|+..+++.+|+.++|..++.+++...|+.++.+|+|+|+|+.+++++.|.++|
T Consensus 336 f~~~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~lvR~svGlE~~~dli~dl~~Al 402 (403)
T PRK07810 336 VLDKLRVIDISNNLGDAKSLITHPATTTHRAMGPEGRAAIGLGDGVVRLSVGLEDTDDLIADLDRAL 402 (403)
T ss_pred HHHhCCceEEeccCCCCcceeeCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999987
No 22
>PRK08133 O-succinylhomoserine sulfhydrylase; Validated
Probab=100.00 E-value=1.4e-49 Score=371.09 Aligned_cols=375 Identities=39% Similarity=0.663 Sum_probs=331.1
Q ss_pred CccceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcH
Q 016612 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (386)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (386)
++++.+++.|..++.+|.+.+|+++++++...... ....+.|++.++|..+++++.+++++|.++.+++++|
T Consensus 6 ~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~v~~ssG 85 (390)
T PRK08133 6 GFDTLAVRAGQLRSPFGEHSEALFLTSSFVFESAAEAAARFAGEEPGNIYSRFTNPTVTMFQERLAALEGAEACVATASG 85 (390)
T ss_pred CcchhheeCCCCCCCCCCccCCccCCCCcccCCHHHHHHhhcCCcCCceeECCCChHHHHHHHHHHHHhCCCcEEEECCH
Confidence 46688899886566789999999999888765432 1234668888889999999999999999999999999
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
++|+. ++.+++++||+|+++++.|+++...+...++..|++++.++..|+++++++++++|++|++++|+||+|.+.|+
T Consensus 86 ~~Ai~~al~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~ie~p~NptG~v~dl 165 (390)
T PRK08133 86 MAAILAVVMALLQAGDHVVSSRSLFGSTVSLFEKIFARFGIETTFVDLTDLDAWRAAVRPNTKLFFLETPSNPLTELADI 165 (390)
T ss_pred HHHHHHHHHHHhCCCCEEEEccCcchhHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCCcCCH
Confidence 99986 56678899999999999999988777667778999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChh
Q 016612 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 238 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (386)
++|.++|+++|+++|+|++++.+....+...++|+++.|+||+++|++...+|+++++++ ..+.+.......+..+++.
T Consensus 166 ~~I~~la~~~gi~livD~t~~~~~~~~pl~~g~Divv~S~sK~~~g~g~~~GG~vv~~~~-~~~~~~~~~~~~g~~~~~~ 244 (390)
T PRK08133 166 AALAEIAHAAGALLVVDNCFCTPALQQPLKLGADVVIHSATKYLDGQGRVLGGAVVGSKE-LMEEVFGFLRTAGPTLSPF 244 (390)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEeecceeecCCcceEeEEEEcCHH-HHHHHHHHHHHhCCCCCHH
Confidence 999999999999999999998887766777789999999999997765445688877654 4444544555567788888
Q ss_pred hHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHh
Q 016612 239 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVE 317 (386)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 317 (386)
.+++++++++.+..|+++..+++..+.++|++++.+..+++++++++|++.+..++..+.|++++|.+. +.+...+|++
T Consensus 245 ~a~~~l~gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~ 324 (390)
T PRK08133 245 NAWVFLKGLETLSLRMEAHSANALALAEWLEAHPGVERVFYPGLPSHPQHELAKRQQKGGGAIVSFEVKGGREAAWRVID 324 (390)
T ss_pred HHHHHHcccchHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHHhCCCCceEEEEEEcCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988877889999999995 5667889999
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.++...+..+.|+..+++.+|+.++|..++++.+...|+.++.||+|+|+|+.+++++.|+++|++
T Consensus 325 ~l~l~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~ 390 (390)
T PRK08133 325 ATRLISITANLGDTKTTITHPATTTHGRLSPEARAAAGITEGLIRVAVGLEDVADIKADLARGLAA 390 (390)
T ss_pred hCCcceEeccCCCcceeeecCCCCCcccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999999999964
No 23
>TIGR01328 met_gam_lyase methionine gamma-lyase. This model describes a methionine gamma-lyase subset of a family of PLP-dependent trans-sulfuration enzymes. The member from the parasite Trichomonas vaginalis is described as catalyzing alpha gamma- and alpha-beta eliminations and gamma-replacement reactions on methionine, cysteine, and some derivatives. Likewise, the enzyme from Pseudomonas degrades cysteine as well as methionine.
Probab=100.00 E-value=2.7e-49 Score=368.85 Aligned_cols=376 Identities=38% Similarity=0.681 Sum_probs=331.5
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCc
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~ 78 (386)
.+++++++.|.. .+..|.+.||++++++|...+.. ....+.|++.++|..+++++.+++++|.+..+++++
T Consensus 3 ~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~av~~~s 82 (391)
T TIGR01328 3 TFATRAIHAGYPPKDQFGALTPPIYQTSTFVFDSCEQGGNRFAGQESGYIYSRLGNPTVSNLEGRIAFLEGTEAAVATSS 82 (391)
T ss_pred CcccceeeCCccCCCCCCCccCCcccCcceecCChHHHHHhhcCCcCCCceeCCCCchHHHHHHHHHHHhCCCcEEEECC
Confidence 356888998843 44579999999999999765531 223467899899999999999999999999999999
Q ss_pred HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 79 gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
|++|+. ++.+++++||+|+++++.|+++...+...+...|+++++++.+|++++++++++++++|++++|+||+|.+.|
T Consensus 83 G~~Ai~~~l~al~~~Gd~Vi~~~~~y~~t~~~~~~~~~~~G~~~~~vd~~d~e~l~~~i~~~tklV~le~p~Np~G~v~d 162 (391)
T TIGR01328 83 GMGAIAATLLTILKAGDHLISDECLYGCTFALLEHALTKFGIQVDFINMAIPEEVKAHIKDNTKIVYFETPANPTMKLID 162 (391)
T ss_pred HHHHHHHHHHHHhCCCCEEEEecCcchHHHHHHHHHHhcCCeEEEEECCCCHHHHHHhhccCCeEEEEECCCCCCCcccC
Confidence 999987 5566889999999999999888777777778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh--hhhcCCCC
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGL 235 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~--~~~~~~~~ 235 (386)
+++|.++|+++|+++|+|++++.+....+...++|+++.|++|+++++++.++|+++++ +++.+.++.. ....+..+
T Consensus 163 l~~I~~la~~~gi~livD~a~a~~~~~~~~~~g~Divv~S~sK~lgg~g~~~gG~v~~~-~~li~~l~~~~~~~~~g~~l 241 (391)
T TIGR01328 163 MERVCRDAHSQGVKVIVDNTFATPMLTNPVALGVDVVVHSATKYIGGHGDVVAGLICGK-AELLQQIRMVGIKDMTGSVI 241 (391)
T ss_pred HHHHHHHHHHcCCEEEEECCCchhccCCchhcCCCEEEccccccccCCCCceEEEEEcC-HHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999999998877777778999999999999988776667888775 5555555432 22345678
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHH
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKH 314 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 314 (386)
++..+++++++++.+..|+++..++++.+.++|++++.+..+++|+++++|++.++.++.++.|++++|.++ +.+...+
T Consensus 242 ~~~~a~l~l~~L~tl~~r~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~ 321 (391)
T TIGR01328 242 SPFDAWLILRGLKTLNIRMKRHSENAMKVAEYLKSHPAVEKVYYPGFEDHPGHDIAAKQMRMGGGMITFELKGGFAGAKK 321 (391)
T ss_pred CcHHHHHHHhCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEeCCCHHHHHH
Confidence 888999999999999999999999999999999999999999999999999999988877888999999995 5566889
Q ss_pred HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 315 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 315 l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
|++.++...+..+.|+..+++++|+.++|..++.+++...|+.++.||+|+|+|+.+++++.|.++|+++
T Consensus 322 f~~~l~~~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 391 (391)
T TIGR01328 322 LLNNLKLIRLAVSLGDAETLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGLEDADDLIADLKQALDAL 391 (391)
T ss_pred HHHhCCcceEecCCCCCcccCcCCCccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999863
No 24
>PRK06234 methionine gamma-lyase; Provisional
Probab=100.00 E-value=4.8e-49 Score=368.58 Aligned_cols=383 Identities=39% Similarity=0.629 Sum_probs=335.7
Q ss_pred CCCCCCCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCCC--------CCCccccCCCCchHHHHHHHHHhhcCCC
Q 016612 1 MSVEEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKAD 71 (386)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~y~~~g~~~~~~l~~~l~~~~g~~ 71 (386)
|.+...-.+++..++.|.. ++..|.+.+|+++++++....... ...+.|++.++|...++++.+++++|.+
T Consensus 1 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~iA~~~g~~ 80 (400)
T PRK06234 1 MENIKKMGFATKAIHGGHIGDKQFGSLATPIYQTSTFIFDSAEQGGRRFAGEESGYIYSRLGNPTSTEVENKLALLEGGE 80 (400)
T ss_pred CcccccCCccchheECCCCCCCCCCCccCCcccccceecCChHHHHHhhccCcCCCcccCCCCccHHHHHHHHHHHhCCC
Confidence 4444555677888998843 455799999999999987655421 2335589888899999999999999999
Q ss_pred ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 72 RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 72 ~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
+.+++++|++|+. ++.+++++||+|++++|.|+++...+...++..|++++.++..|++++++++++++++|++++|+|
T Consensus 81 ~~l~~~sG~~Ai~~al~~ll~~Gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~vd~~d~e~l~~~i~~~tklI~iesP~N 160 (400)
T PRK06234 81 AAVVAASGMGAISSSLWSALKAGDHVVASDTLYGCTFALLNHGLTRYGVEVTFVDTSNLEEVRNALKANTKVVYLETPAN 160 (400)
T ss_pred cEEEEcCHHHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHhhCCeEEEEECCCCHHHHHHHhccCCeEEEEECCCC
Confidence 9999999999886 566789999999999999998877666667889999999999999999999999999999999999
Q ss_pred CCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh-
Q 016612 151 PRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL- 227 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~- 227 (386)
|+|.+.|+++|.++|+++ |+++++|++|+.+....+...++|+++.|++|+++|++..++|++++++ ++.+.++..
T Consensus 161 PtG~v~dl~~I~~la~~~~~~i~livDea~~~~~~~~~l~~g~Divv~S~sK~l~g~g~~~gG~v~~~~-~~~~~l~~~~ 239 (400)
T PRK06234 161 PTLKVTDIKAISNIAHENNKECLVFVDNTFCTPYIQRPLQLGADVVVHSATKYLNGHGDVIAGFVVGKE-EFINQVKLFG 239 (400)
T ss_pred CCCCcCCHHHHHHHHHhcCCCCEEEEECCCCchhcCCchhhCCcEEEeeccccccCCCCceeEEEEecH-HHHHHHHHHH
Confidence 999999999999999997 9999999999988776677778999999999999877666679999875 455555432
Q ss_pred -hhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe
Q 016612 228 -QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 306 (386)
Q Consensus 228 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 306 (386)
....+..+++..+++..++++.+..|+++..++++.+.++|++++.++.+.+++++++|.+.+..+..++.|++++|.+
T Consensus 240 ~~~~~g~~l~p~~a~l~~~~l~tl~~r~~~~~~na~~~a~~L~~~~~V~~V~~p~l~~~~~~~~~~~~~~~~g~l~s~~l 319 (400)
T PRK06234 240 IKDMTGSVIGPFEAFLIIRGMKTLQIRMEKHCKNAMKVAKFLESHPAVEKVYYPGLESFEYYELAKKQMSLPGAMISFEL 319 (400)
T ss_pred HHHhcCCCCCHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCCcHHHHHHhCCCCCceEEEEe
Confidence 3345678899999999999999999999999999999999999999999999999999999988777778899999999
Q ss_pred C-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 307 G-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 307 ~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+ +.....+|++.++..++..+.|+..+++.+|+.++|..++++++...|+.++.||+|+|+|+.+++++.|.++|+++
T Consensus 320 ~~~~~~~~~f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~~ 398 (400)
T PRK06234 320 KGGVEEGKVVMNNVKLATLAVSLGDAETLIQHPASMTHSPYTAEERKEAGISDGLVRLSVGLEDVDDIIADLKQALDLI 398 (400)
T ss_pred cCcHHHHHHHHHhCCcceEeccCCCCCceecCCccCCCCCCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHHH
Confidence 5 45667899999999999999999999999999999999999999999999999999999999999999999999863
No 25
>PRK07811 cystathionine gamma-synthase; Provisional
Probab=100.00 E-value=7.8e-49 Score=365.72 Aligned_cols=372 Identities=45% Similarity=0.738 Sum_probs=331.1
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCCC-CCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATE-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~- 84 (386)
.+++..++.+.. ....|.+.+|++++++|....... ...+.|++.++|...++++.++++.|.+..+++++|++|+.
T Consensus 12 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~Le~~lA~~~g~~~~i~~~sG~~Ai~~ 91 (388)
T PRK07811 12 GFATRAIHAGYEPDPATGAVNPPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEEQLAALEGGAYGRAFSSGMAATDC 91 (388)
T ss_pred CcccceeeCCCCCCCCCCCccCCccCCcceecCCcccccCCCcccCCCCccHHHHHHHHHHHhCCCceEEeCCHHHHHHH
Confidence 456788888854 334799999999999998765432 23467888888999999999999999998999999999987
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHH
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 164 (386)
++.+++++||+|++++|.|+++...+...++..|++++.++..|++++++.+++++++|++++|+||+|.+.|+++|.++
T Consensus 92 ~l~all~~Gd~Vl~~~~~y~~t~~~~~~~~~~~gi~~~~~d~~d~e~l~~~i~~~tklV~ie~p~NPtg~~~dl~~I~~l 171 (388)
T PRK07811 92 LLRAVLRPGDHIVIPNDAYGGTFRLIDKVFTRWGVEYTPVDLSDLDAVRAAITPRTKLIWVETPTNPLLSITDIAALAEL 171 (388)
T ss_pred HHHHHhCCCCEEEEcCCCchHHHHHHHHhCcCCCeEEEEeCCCCHHHHHHhcCcCCeEEEEECCCCCcceecCHHHHHHH
Confidence 55668999999999999999877666666778899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 165 a~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
|+++|+++|+|++++.+....+...++|++++|++|+++|++++++|+++++++.+.+.+.......+...++..+++..
T Consensus 172 a~~~gi~lIvD~a~a~~~~~~p~~~gaDivv~S~sK~l~g~~~~~gG~vv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~ 251 (388)
T PRK07811 172 AHDAGAKVVVDNTFASPYLQQPLALGADVVVHSTTKYIGGHSDVVGGALVTNDEELDEAFAFLQNGAGAVPGPFDAYLTL 251 (388)
T ss_pred HHHcCCEEEEECCCCccccCCchhhCCcEEEecCceeecCCCCcEEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 99999999999999988766677779999999999999988888899999887778777777666667778888999999
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCcce
Q 016612 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFS 323 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~g 323 (386)
++++.+..|+++..+|++.+.++|++++.+..+.+|+++++|++..+.++..+.|++++|.++ +.+.+.+|++.++...
T Consensus 252 ~~L~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~~~~~~~~~~~~g~g~~~s~~~~~~~~~~~~f~~~l~~~~ 331 (388)
T PRK07811 252 RGLKTLAVRMDRHSENAEAVAEFLAGHPEVSTVLYPGLPSHPGHEVAARQMRGFGGMVSVRLAGGEEAARDFCARTKVFT 331 (388)
T ss_pred hccCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCchHHHHHHhcCCCCceEEEEeCCCHHHHHHHHHhCCcce
Confidence 999999999999999999999999999999999999999999999988877889999999994 5677889999999999
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
+..++|+..+++.+|+..+|..++.+ ..|+.++.||+|+|+|+.+++++.|.++|+
T Consensus 332 ~~~s~G~~~sl~~~~~~~~~~~~~~~---~~gi~~~liR~svGlE~~~dl~~dl~~al~ 387 (388)
T PRK07811 332 LAESLGGVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLADLEQALG 387 (388)
T ss_pred eeccCCCCcceEeCCcccCcccCCHh---hcCCCCCEEEEEeCCCCHHHHHHHHHHHhh
Confidence 99999999999999999999888755 348889999999999999999999999986
No 26
>COG2873 MET17 O-acetylhomoserine sulfhydrylase [Amino acid transport and metabolism]
Probab=100.00 E-value=1e-49 Score=344.82 Aligned_cols=380 Identities=40% Similarity=0.619 Sum_probs=344.1
Q ss_pred CCCCccceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 016612 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (386)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (386)
...++++..++.|+..+..|....|+++++.+...+.. ...++-|+|-++|....+|++++.+-|.-..+.+
T Consensus 4 ~~~~f~T~~vHag~~d~~t~ara~PIyqtTsy~F~d~~haa~lF~l~~~G~iYsRi~NPT~~vlE~RiAaLEGG~aa~a~ 83 (426)
T COG2873 4 ANWGFETLAVHAGQEDPTTGARAVPIYQTTSYVFDDTDHAAALFGLKEPGNIYTRIMNPTTDVLEERIAALEGGVAALAV 83 (426)
T ss_pred cccCcchhhhcCCCCCCCCCceecceeeeeeeecCCHHHHHHHhCCCcCCceeeeccCchHHHHHHHHHHhhcchhhhhh
Confidence 45789999999999977799999999999999887664 3557889999999999999999999998889999
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc
Q 016612 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 77 ~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~ 155 (386)
.||++|+. +++.++++||+|+.+.--|+++...+...+++.|+++++++.+|+++++++++++||+|+++...||.+.+
T Consensus 84 aSG~AA~~~ai~~la~aGD~iVss~~LYGGT~~lf~~tl~~~Gi~v~fvd~~d~~~~~~aI~~nTkavf~EtigNP~~~v 163 (426)
T COG2873 84 ASGQAAITYAILNLAGAGDNIVSSSKLYGGTYNLFSHTLKRLGIEVRFVDPDDPENFEAAIDENTKAVFAETIGNPGLDV 163 (426)
T ss_pred ccchHHHHHHHHHhccCCCeeEeeccccCchHHHHHHHHHhcCcEEEEeCCCCHHHHHHHhCcccceEEEEeccCCCccc
Confidence 99998875 88889999999999999999999998888999999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHH-------------
Q 016612 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK------------- 222 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~------------- 222 (386)
.|+++|.++||++|+++|+|..++.|++..|.+.|+||++.|++||++|++..++|+++-....-+.
T Consensus 164 ~Die~ia~iAh~~gvpliVDNT~atpyl~rP~~hGADIVvHS~TK~igGhGt~iGG~iVD~G~FDw~~~~rfP~~~~p~p 243 (426)
T COG2873 164 LDIEAIAEIAHRHGVPLIVDNTFATPYLCRPIEHGADIVVHSATKYIGGHGTAIGGVIVDGGKFDWTANGRFPEFTTPDP 243 (426)
T ss_pred cCHHHHHHHHHHcCCcEEEecCCCcceecchhhcCCCEEEEeecccccCCccccceEEEeCCccccccCCCCcccCCCCc
Confidence 9999999999999999999999999998899999999999999999999988888887754221111
Q ss_pred -------------------HHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCC
Q 016612 223 -------------------ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 283 (386)
Q Consensus 223 -------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 283 (386)
......+-.|..++++++++.+.+++.+..|+++.-+|+..+.+||++++.+..+.+++|+
T Consensus 244 ~YhGl~~~~~~g~~af~~~~r~~~lRDlGa~lsPfnAfl~lqGlETL~LRmerH~~NA~~vA~~L~~HpkV~~V~YpgL~ 323 (426)
T COG2873 244 SYHGLVYTETFGNAAFIIKARVQLLRDLGATLSPFNAFLLLQGLETLSLRMERHCENALKVAEFLENHPKVAWVNYPGLA 323 (426)
T ss_pred cccceehhhhcccHHHHHHHHHHHHHhcccccCcHHHHHHHhchhhhHHHHHHHHHhHHHHHHHHhcCCCeeeeecCCCC
Confidence 0011223457889999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhc-cCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeE
Q 016612 284 EHPGHELHYSQ-AKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 361 (386)
Q Consensus 284 ~~~~~~i~~~~-~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 361 (386)
+++.+....++ +++.|++++|.+.+ .+..+++++.++.+....+-|..++++.+|++-+|.-++++.+.+.|+.++.|
T Consensus 324 ~~~~h~la~kyl~~g~g~vltF~~kgg~ea~~~fi~~l~L~s~laNvGD~rsLvIHPAsTTH~ql~~ee~~~aGv~~~~I 403 (426)
T COG2873 324 SHPYHALAKKYLPKGAGAVLTFGVKGGYEAGKKFIDALKLFSHLANIGDARSLVIHPASTTHRQLSEEEQAAAGVTPDLI 403 (426)
T ss_pred CCcchhHHHhhccCCCceEEEEEecChHHHHHHHHHHHHHHHhhccccccceeEecCcccchhcCCHHHHHhcCCCCCcE
Confidence 99999887654 67899999999955 47889999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCChHHHHHHHHHHHhcC
Q 016612 362 RISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 362 Ris~~~~~~~~~i~~l~~~l~~~ 384 (386)
|+|+|.|+++++++.|+++|+++
T Consensus 404 RlSVGIEd~~DiiaDl~qAl~~~ 426 (426)
T COG2873 404 RLSVGIEDIDDIIADLEQALEAA 426 (426)
T ss_pred EEEeccCCHHHHHHHHHHHHhcC
Confidence 99999999999999999999864
No 27
>PRK08134 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=7.3e-49 Score=368.34 Aligned_cols=384 Identities=36% Similarity=0.558 Sum_probs=333.3
Q ss_pred CCCCCCCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCC
Q 016612 1 MSVEEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKAD 71 (386)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~ 71 (386)
|--+.+..+++.+++.+.. ++..|.+.+|++++++|..++.. ....+.|++.++|..+++++.++++.|.+
T Consensus 1 ~~~~~~~~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~y~R~~~p~~~~le~~lA~l~g~~ 80 (433)
T PRK08134 1 MPGMSPPGFDTLALHAGAAPDPATGARAVPIHLTTSFVFRDSDHAAALFNLERAGHVYSRISNPTVAVLEERVAALEGGV 80 (433)
T ss_pred CCCCCCCCcchhheeCCCCCCCCCCCccCCccCCCccccCCHHHHHHhhcccccCceeecCcChHHHHHHHHHHHHhCCC
Confidence 3345677788999999844 44579999999999999765532 23356788888899999999999999999
Q ss_pred ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 72 RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 72 ~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
.+++++||++|++ ++.+++++||+|+++...|+++...+...+...|+++++++..|+++++++++++|++|++++++|
T Consensus 81 ~av~~sSGt~Al~~al~~ll~~Gd~Vi~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~d~~~l~~~i~~~TklV~~e~~~n 160 (433)
T PRK08134 81 GAIATASGQAALHLAIATLMGAGSHIVASSALYGGSHNLLHYTLRRFGIETTFVKPGDIDGWRAAIRPNTRLLFGETLGN 160 (433)
T ss_pred cEEEeCCHHHHHHHHHHHHhCCCCEEEEeCCccHHHHHHHHHHHhhCCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCc
Confidence 8999999999997 556689999999999999998877665666789999999999899999999999999999999999
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChh-----------
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER----------- 219 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~----------- 219 (386)
|+|.+.|+++|.++|+++|+++|+|.+++.|....+...|+|+++.|.+|+++|++.+.+|+++.....
T Consensus 161 p~g~v~Di~~I~~la~~~gi~livD~t~a~~~~~~pl~~GaD~vv~S~tK~l~g~g~~~gG~v~~~~~~~~~~~~~~~~~ 240 (433)
T PRK08134 161 PGLEVLDIPTVAAIAHEAGVPLLVDSTFTTPYLLRPFEHGADLVYHSATKFLGGHGTAIGGVLVDGGRFDWEASGKFPEL 240 (433)
T ss_pred ccCcccCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEeccccccCCCCCceEEEEEecCccccccccccccc
Confidence 999999999999999999999999999999988888888999999999999988877667776632110
Q ss_pred --------------------H-HHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEe
Q 016612 220 --------------------L-AKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVN 278 (386)
Q Consensus 220 --------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 278 (386)
. .+.........+..+++..+++++++++.+..|+++..+++..+.++|++++.+..+.
T Consensus 241 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ls~~~A~l~~~gL~tl~~R~~~~~~nA~~la~~L~~~p~V~~V~ 320 (433)
T PRK08134 241 TEPYAGFHGMVFAEESTVAAFLLRARREGLRDFGACLSPMNAWQLLQGIETLPLRMERHVANTRKVVAFLASHPAVARVA 320 (433)
T ss_pred cCCcccccccchhhccchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEE
Confidence 0 0001112234567899999999999999999999999999999999999999999999
Q ss_pred cCCCCCCCchhhhhhcc-CCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 279 YAGLPEHPGHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 279 ~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+|++++++.+.+..+.. .+.|++++|.+. +.+...+|++.++......+.|+..+++++|+.++|..++.+++...|+
T Consensus 321 yP~l~~~p~~~~~~~~~~~g~gg~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sL~~~p~~~~h~~~~~~~~~~~Gi 400 (433)
T PRK08134 321 HPELESHPDHALAKRLLPRGAGSVFSFDLKGGRAAGRKFIESLKLFSHLANVGDARSLVIHPASTTHFRMDAAALAAAGI 400 (433)
T ss_pred CCCCCCCccHHHHHHhCCCCCceEEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCccCcccCCHHHHHhcCC
Confidence 99999999998877655 678999999995 4567889999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 357 TEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 357 ~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.++.||+|+|+|+.+++++.|.++|++.
T Consensus 401 ~~~liRlsvGlE~~~dli~dl~~Al~~~ 428 (433)
T PRK08134 401 GEGTIRLSIGLEDADDLIDDLKRALKAA 428 (433)
T ss_pred CCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999864
No 28
>PRK07049 methionine gamma-lyase; Validated
Probab=100.00 E-value=1.2e-48 Score=367.57 Aligned_cols=377 Identities=33% Similarity=0.578 Sum_probs=329.0
Q ss_pred CCccceeeccCCCCCC-CCCcccceeeeeeeecCCCCC------------------CCCccccCCCCchHHHHHHHHHhh
Q 016612 7 PGVSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATE------------------NGPYDYTRSGNPTRDALESLLAKL 67 (386)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~------------------~~~~~y~~~g~~~~~~l~~~l~~~ 67 (386)
..+++.+++.|..++. .|.+.||++++++|..++... ...+.|++.++|....+++.++++
T Consensus 16 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~R~~~Pt~~~Le~~lA~l 95 (427)
T PRK07049 16 LHPETQMLNYGYDPELSEGAVKPPVFLTSTFVFRSAEDGRDFFDYVSGRKEPPAGEGAGLVYSRFNHPNSEIVEDRLAVY 95 (427)
T ss_pred CCcccceeeCCCCCCCCCCCccCCccCccceecCChHHHHhhhhccccccccccccccCccccCCCCcCHHHHHHHHHHH
Confidence 4567888988854333 799999999999997654321 123568888999999999999999
Q ss_pred cCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC-CCCHHHHHhhhC-----CCc
Q 016612 68 DKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIG-----PWT 140 (386)
Q Consensus 68 ~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~~~-----~~~ 140 (386)
.|.++.+++++|++|+. ++.+++++||+|++++|.|+.+...+...++..|++++.++ ..|.+++++.+. +++
T Consensus 96 eg~~~~iv~~sG~~Ai~~~l~al~~~Gd~Vv~~~p~Y~~~~~~~~~~l~~~Gi~~v~~~~~~d~~~l~~~l~~~~~~~~t 175 (427)
T PRK07049 96 EGAESAALFSSGMSAIATTLLAFVRPGDVILHSQPLYGGTETLLAKTFRNFGVGAVGFADGLSEAAIGAAAEAAAAKGRV 175 (427)
T ss_pred hCCCcEEEEccHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHhcCcEEEEEeCCCCHHHHHHHHHhhccCCCc
Confidence 99999999999999987 55678999999999999999997665556677899865554 457788876663 579
Q ss_pred eEEEEeCCCCCCcccccHHHHHHHHHH------cCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEE
Q 016612 141 KLVWVESPTNPRQQICDIRKIAEMAHA------HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLA 214 (386)
Q Consensus 141 ~~v~~~~~~nptG~~~~l~~i~~la~~------~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~ 214 (386)
++|++++|+||||.+.|+++|.++++. +++++|+|++|..+....+...++|+++.|+||+++|++|+|+|+++
T Consensus 176 klv~lesP~NPtg~v~d~~~l~~la~~~~~~~~~~~~vvvDety~~~~~~~pl~~g~divv~S~SK~~gG~~glr~G~vv 255 (427)
T PRK07049 176 SLILIETPANPTNSLVDVAAVRRVADAIEARQGHRPIIACDNTLLGPVFQKPLEHGADLSVYSLTKYVGGHSDLVAGAVL 255 (427)
T ss_pred eEEEEECCCCCCCcccCHHHHHHHHHHhhhcccCCCEEEEECCccccccCCccccCCCEEEEcCceeecCCCCcEEEEEE
Confidence 999999999999999999999999988 79999999998877666677778999999999999888999999999
Q ss_pred EcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCC--CCCCchhhhh
Q 016612 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGL--PEHPGHELHY 292 (386)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l--~~~~~~~i~~ 292 (386)
++ +++.+.+.......+..+++..++++.++++.+..|+++..++++.+.++|++++.+..++++++ +++|++.+..
T Consensus 256 ~~-~~l~~~l~~~~~~~g~~ls~~~a~l~~r~L~tl~~R~~~~~~~a~~la~~L~~~p~V~~v~yp~~l~~~~~~~~~~~ 334 (427)
T PRK07049 256 GR-KALIRQVRALRSAIGTQLDPHSCWMLGRSLETLVLRMERANRNARAVAEFLRDHPKVEKLHYLPFLDPDSAYGAVYK 334 (427)
T ss_pred CC-HHHHHHHHHHHHhcCCCCCHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCCCccHHHHH
Confidence 76 55777777777777888999999999999999999999999999999999999999999999985 9999999988
Q ss_pred hccCCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChH
Q 016612 293 SQAKGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVN 371 (386)
Q Consensus 293 ~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~ 371 (386)
++..+.|++++|.+. +.+...+|++.++...+..++|+..+++++|+.++|..++.+++...|+.++.||+|+|+|+.+
T Consensus 335 ~~~~g~g~~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~sli~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~ 414 (427)
T PRK07049 335 RQCTGAGSTFSFDIKGGQAAAFRFLNALQIFKLAVSLGGTESLASHPASMTHSGVPADVRERIGVLESTIRLSIGIEHPD 414 (427)
T ss_pred hhCCCCccEEEEEEcCCHHHHHHHHHcCcccEEcccCCCCCceeeCCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHH
Confidence 777889999999994 5566889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcC
Q 016612 372 DLISDLDKALRTG 384 (386)
Q Consensus 372 ~~i~~l~~~l~~~ 384 (386)
++++.|.++|+++
T Consensus 415 dl~~dl~~al~~~ 427 (427)
T PRK07049 415 DLIADLAQALDAA 427 (427)
T ss_pred HHHHHHHHHHhcC
Confidence 9999999999864
No 29
>PRK06460 hypothetical protein; Provisional
Probab=100.00 E-value=1.3e-48 Score=362.71 Aligned_cols=372 Identities=37% Similarity=0.598 Sum_probs=327.2
Q ss_pred CccceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HH
Q 016612 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (386)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~ 86 (386)
++++..++.|. ++.+|.+.||++++++|..++. ..+.|++.++|..+++++.++++.|.+..+++++|++++. ++
T Consensus 2 ~~~t~~~~~~~-~~~~~~~~~pi~~~~~~~~~~~---~~~~y~r~~~p~~~~L~~~lA~l~g~~~~v~~~sG~~ai~~~l 77 (376)
T PRK06460 2 KDATRTVREDI-DEATGAITTPIYQTTAYHYPEG---EKYRYSREANPTVLELTKKIVELENAEMGVAFSSGMGAISTTA 77 (376)
T ss_pred CcceeeeecCC-CCCCCCccCCccCCcceeeCCC---CCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHH
Confidence 35677888883 4557899999999999987642 3577999999999999999999999998899999999987 45
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHH
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~ 166 (386)
.+++++||+|+++.+.|+++...+...++..|++++.++.++.+.+++.+++++++|++++|+||+|.+.|+++|.++|+
T Consensus 78 ~al~~~Gd~Vl~~~~~~~~ty~~~~~~~~~~G~~v~~~~~~~~~~l~~~~~~~tklV~l~sp~NPtG~v~d~~~I~~la~ 157 (376)
T PRK06460 78 LALLKPGNSVLVHRDMFGRSYRFFTDYLKNWGVNVDASNPGSDNIIEKAKSKRYDVVFVENITNPLLRVVDITELSKVCK 157 (376)
T ss_pred HHHhCCCCEEEEecCCcCcHHHHHHHHHHhhCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcccCHHHHHHHHH
Confidence 66899999999999999877766667778899999999887766677666788999999999999999999999999999
Q ss_pred HcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhc
Q 016612 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (386)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (386)
++|+++|+|++|+.+....+...++|+++.|+||+++|++++++|+++++ +++.+.+.......+...++..++.++++
T Consensus 158 ~~g~~vivDea~~~~~~~~~l~~~~divv~S~sK~l~G~~~~~~G~~~~~-~~l~~~l~~~~~~~g~~~~~~~a~~~l~~ 236 (376)
T PRK06460 158 ENGSILIVDATFSTPINQKPLELGADIVVHSASKFLAGHNDVIAGLAAGY-GKLLNVIDQMRRTLGTSLDPHAAYLTLRG 236 (376)
T ss_pred HcCCEEEEECCcCccccCChhhcCCCEEEeecceeccCCCCceEEEEecC-HHHHHHHHHHHHhcCCCCCHHHHHHHHhc
Confidence 99999999999987654445556889999999999988877889999876 55766676666666777788888888889
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCcceec
Q 016612 247 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSIT 325 (386)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~ 325 (386)
++.+..++++..++++.+.++|++++.++.+.+|+|+++|.+.+..+..++.|++++|.++ +.....++++.++.....
T Consensus 237 ~~~l~~r~~~~~~n~~~l~~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~g~gg~~s~~~~~~~~~~~~~~~~l~~~~~~ 316 (376)
T PRK06460 237 IKTLKIRMDVINRNAEQIAEFLEGHPKVVKVYYPGLKSHVDYEIARRVLKGFGGVLSFEVNGGQESALKVMKSLKLIIPA 316 (376)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCcHHHHHHHHHhCCcceec
Confidence 9999999999999999999999999999999999999999999988877889999999995 456788999999999999
Q ss_pred cCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 326 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 326 ~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.+.|+..+++.+|+.++|..++.+++.+.|+.++.||+|+|+||.+++++.|.++|+++
T Consensus 317 ~s~Gg~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al~~~ 375 (376)
T PRK06460 317 QTLGGVNSVISHPATMSHRTLSLEERKIVGITDSLLRLSVGIEDVNDLIEDLDRALSTL 375 (376)
T ss_pred cCCCCCceEEeCccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999764
No 30
>PRK07812 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-48 Score=366.38 Aligned_cols=377 Identities=38% Similarity=0.576 Sum_probs=329.4
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCc
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~ 78 (386)
.++++.++.+.. .+.+|.+.||++++++|..++.. ....+.|++.++|..+++++.++++.|.+..++++|
T Consensus 13 ~~~t~~~~~~~~~~~~~~~~~~pi~~sst~~~~~~~~~~~~~~~~~~~~~Ysr~~~p~~~~Le~~lA~l~g~~~av~~sS 92 (436)
T PRK07812 13 SFETKQIHAGQTPDPATNARALPIYQTTSYTFDDTDHAAALFGLAEPGNIYTRIMNPTQDVVEQRIAALEGGVAALLLAS 92 (436)
T ss_pred CcchhheeCCCCCCCCCCCccCCCcCCCCcccCCHHHHHHhhcCCcCCccccCCCCchHHHHHHHHHHHhCCCeEEEEcc
Confidence 355778888844 34479999999999999775532 123456898889999999999999999999999999
Q ss_pred HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC-CCCHHHHHhhhCCCceEEEEeCCCCCCcccc
Q 016612 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (386)
Q Consensus 79 gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~ 156 (386)
|++|+. ++.+++++||+|+++...|+++...+...+...|++++.++ ..|++++++++++++++|++++|+||+|.+.
T Consensus 93 G~aAi~~al~all~~Gd~Vv~~~~~y~~t~~~~~~~l~~~Gi~v~~vdd~~d~e~l~~ai~~~tklV~ie~~sNp~G~v~ 172 (436)
T PRK07812 93 GQAAETFAILNLAGAGDHIVSSPRLYGGTYNLFHYTLPKLGIEVSFVEDPDDLDAWRAAVRPNTKAFFAETISNPQIDVL 172 (436)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCcchHHHHHHHHHhhcCeEEEEEECCCCCHHHHHHhCCCCCeEEEEECCCCCCCeec
Confidence 999986 66778999999999999999887666666778999999996 5689999999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcCh------------------
Q 016612 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE------------------ 218 (386)
Q Consensus 157 ~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~------------------ 218 (386)
|+++|.++|+++|+++|+|++++.+....+...|+|+++.|++|+++|++++.+|.++.+..
T Consensus 173 Dl~~I~~la~~~gi~liVD~t~a~~~~~~pl~~GaDivv~S~tK~lgg~G~~i~G~vv~~~~~~~~~~~~~~~~~~~~~~ 252 (436)
T PRK07812 173 DIPGVAEVAHEAGVPLIVDNTIATPYLIRPLEHGADIVVHSATKYLGGHGTAIAGVIVDGGTFDWTQGRFPGFTTPDPSY 252 (436)
T ss_pred CHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCEEEEecccccCCCCCeEEEEEEcCCccccccccccccccCCccc
Confidence 99999999999999999999999888888888899999999999999988877887775321
Q ss_pred -----------h-HHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCC
Q 016612 219 -----------R-LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 286 (386)
Q Consensus 219 -----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 286 (386)
. +.+.........|..+++..+|+++++++.+..|+++..+++..+.++|++++.++.+.+|+++++|
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~G~~l~p~~a~l~~rgl~tL~~R~~~~~~nA~~la~~L~~~p~v~~V~yPgl~s~p 332 (436)
T PRK07812 253 HGVVFAELGPPAYALKARVQLLRDLGSAISPFNAFLIAQGLETLSLRIERHVANAQRVAEFLEARDEVASVNYAGLPSSP 332 (436)
T ss_pred ccchhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 0 0111123344568899999999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhcc-CCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEE
Q 016612 287 GHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 364 (386)
Q Consensus 287 ~~~i~~~~~-~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 364 (386)
.+.+..++. .+.|++++|.+. +.+...+++++++......+.|+..+++++|+.++|..++.+++...|+.++.||+|
T Consensus 333 ~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~a~slG~~~sLi~~p~~~~h~~~~~~~~~~~gi~~~liRlS 412 (436)
T PRK07812 333 WYERAKRLAPKGTGAVLSFELAGGVEAGKAFVNALTLHSHVANIGDVRSLVIHPASTTHSQLTPEEQLATGVTPGLVRLA 412 (436)
T ss_pred cHHHHHHhCcCCCceEEEEEecCCHHHHHHHHHhCCcceEecccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCeEEEE
Confidence 998887754 678999999994 456688999999999999999999999999999999999999999999999999999
Q ss_pred eccCChHHHHHHHHHHHhcC
Q 016612 365 VGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 365 ~~~~~~~~~i~~l~~~l~~~ 384 (386)
+|+|+.+++++.|.++|+++
T Consensus 413 vGlEd~~dli~dl~~Al~~~ 432 (436)
T PRK07812 413 VGIEGIDDILADLEAGFAAA 432 (436)
T ss_pred eccCCHHHHHHHHHHHHHhh
Confidence 99999999999999999865
No 31
>PRK06084 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.2e-48 Score=366.90 Aligned_cols=376 Identities=37% Similarity=0.591 Sum_probs=327.2
Q ss_pred ccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcH
Q 016612 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (386)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (386)
+++..++.+.. ++..|++.+|++++++|...+.. ....+.|++.++|...++++.++++.|.+..+++++|
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~g~~~~l~~ssG 82 (425)
T PRK06084 3 LETLAIHAGYSPDPTTKAVAVPIYQTTSYAFDDTQHGADLFDLKVPGNIYTRIMNPTNDVLEQRVAALEGGVGALAVASG 82 (425)
T ss_pred cchhheeCCcCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccccCCccccCCCCchHHHHHHHHHHHhCCCceeEehhH
Confidence 45677887743 44478999999999999765542 1234668988999999999999999999899999999
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
++|+. ++.+++++||+|+++.+.|+++...+...+...|+++..++..|++++++++++++++|++++|+||+|.+.|+
T Consensus 83 ~~Ai~~al~al~~~Gd~Vl~~~~~Y~~t~~~~~~~l~~~gi~v~~~d~~d~e~le~ai~~~tklV~lesp~NPtG~v~dl 162 (425)
T PRK06084 83 MAAITYAIQTIAEAGDNIVSVAKLYGGTYNLLAHTLPRIGIETRFAAHDDIAALEALIDERTKAVFCESIGNPAGNIIDI 162 (425)
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCcchHHHHHHHhcccceeEEEEECCCCHHHHHHHhccCCcEEEEeCCCCCCCeecCH
Confidence 99987 55668899999999999999887666666667899999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChh-HH----------------
Q 016612 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LA---------------- 221 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~-~~---------------- 221 (386)
++|.++|+++|+++|+|++++.+....+...++|+++.|++|+++|++...+|+++.++.. ..
T Consensus 163 ~~I~~la~~~~i~vVvD~a~a~~~~~~p~~~gaDivv~S~tK~l~G~g~~~gG~v~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (425)
T PRK06084 163 QALADAAHRHGVPLIVDNTVATPVLCRPFEHGADIVVHSLTKYIGGHGTSIGGIVVDSGKFPWAEHKERFALLNTPDPSY 242 (425)
T ss_pred HHHHHHHHHcCCEEEEECCCcccccCChhhcCCCEEEECchhcccccccceeEEEEeCCccchhhccccccccccCCccc
Confidence 9999999999999999999998887777888999999999999999887777777754320 00
Q ss_pred ----------------HHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCC
Q 016612 222 ----------------KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 285 (386)
Q Consensus 222 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 285 (386)
+.........+..+++..+++++++++.+..|+++..+++..+.++|++++.+..+.+|+++++
T Consensus 243 ~~~~~~~~~g~~~~~~~~~~~~~~~~g~~l~~~~a~l~lrgl~tl~~R~~~~~~na~~la~~L~~~p~v~~V~yP~l~~~ 322 (425)
T PRK06084 243 HGVTYTEAFGPAAFIGRCRVVPLRNMGAALSPFNAFLILQGLETLALRMERHTENALKVARYLQQHPQVAWVKYAGLPDH 322 (425)
T ss_pred ccchhhhhcchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCc
Confidence 0001123356788999999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhhccCC-CCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEE
Q 016612 286 PGHELHYSQAKG-AGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 363 (386)
Q Consensus 286 ~~~~i~~~~~~~-~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 363 (386)
|.+.+..++.++ .|++++|.+. +.+...+|++.++...+..+.|+..+++++|..++|..++++++.+.|+.++.|||
T Consensus 323 p~~~~~~~~~~g~~gg~~s~~~~~~~~~~~~f~~~l~l~~~~~slG~~~slv~~p~~~~h~~~~~~~~~~~gi~~~liR~ 402 (425)
T PRK06084 323 PEHELARRYMGGKPASILSFGIKGGQAAGARFIDALKLVVRLVNIGDAKSLACHPASTTHRQLNDEELEKAGVSRDMVRL 402 (425)
T ss_pred ccHHHHHHhCCCCcceEEEEEecCCHHHHHHHHHhCCcceeccccCCCceeeeCCCcCCcccCCHHHHHhcCCCCCeEEE
Confidence 999988877666 7999999994 45667899999999999999999999999999999999999999999999999999
Q ss_pred EeccCChHHHHHHHHHHHhcC
Q 016612 364 SVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 364 s~~~~~~~~~i~~l~~~l~~~ 384 (386)
|+|+||.+++++.|.++|+++
T Consensus 403 svGlEd~~dLi~dl~~Al~~~ 423 (425)
T PRK06084 403 SIGIEHIDDIIADLAQALDAS 423 (425)
T ss_pred EeccCCHHHHHHHHHHHHHhh
Confidence 999999999999999999865
No 32
>PRK07503 methionine gamma-lyase; Provisional
Probab=100.00 E-value=1.8e-48 Score=364.66 Aligned_cols=376 Identities=39% Similarity=0.644 Sum_probs=330.4
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCc
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~ 78 (386)
.+++.+++.+.. .+..|.+.||++++++|..++.. ....+.|++.++|..+++++.++++.|.+..+++++
T Consensus 9 ~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~~s 88 (403)
T PRK07503 9 GFSTRAIHHGYDPLDHGGALVPPVYLTATFAFPTAEYGAECFAGEEEGHFYSRISNPTLALLEQRMASLEGGEAAVALAS 88 (403)
T ss_pred CccchheeCCCCCCCCCCCccCCcccCcceecCChHHHHHhhccccCCceeeCCCCchHHHHHHHHHHHhCCCcEEEEcC
Confidence 456888998844 34579999999999999765532 233467898888999999999999999998999999
Q ss_pred HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 79 gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
|++|+. ++.+++++||+|+++.+.|+.+...+...++..|++++.++..|+++++++++++|++|++++|+||+|.+.|
T Consensus 89 G~~Al~~~l~~ll~~Gd~Viv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklV~le~p~NPtG~~~d 168 (403)
T PRK07503 89 GMGAITATLWTLLRPGDEVIVDQTLYGCTFAFLHHGLGEFGVTVRHVDLTDPAALKAAISDKTRMVYFETPANPNMRLVD 168 (403)
T ss_pred HHHHHHHHHHHHcCCCCEEEEccCccchHHHHHHHHHhhCCEEEEEeCCCCHHHHHHhcCccCcEEEEeCCCCCCCeeeC
Confidence 999987 4556889999999999999887766656677899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHH--hhhhcCCCC
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--LQNAEGSGL 235 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~--~~~~~~~~~ 235 (386)
+++|.++|+++|+++|+|++|+.+....+...++|++++|++|+++|++++++|+++.+ +++.++++. .....+..+
T Consensus 169 i~~I~~la~~~gi~lIvD~a~a~~~~~~~l~~g~Di~v~S~tK~l~g~gd~~gG~v~~~-~~l~~~l~~~~~~~~~g~~~ 247 (403)
T PRK07503 169 IAAVAEIAHGAGAKVVVDNTYCTPYLQRPLELGADLVVHSATKYLGGHGDITAGLVVGG-KALADRIRLEGLKDMTGAVM 247 (403)
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCCchhhCCCEEEccccccccCCCceeEEEEEcC-HHHHHHHHhhhHHhCcCCCC
Confidence 99999999999999999999988776666777899999999999988777889999854 556665653 244456788
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHH
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKH 314 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 314 (386)
++.++++++++++.+..|+++..+++..+.++|++++.++.+.+|++++++.+.+..++..+.+++++|.+. +.....+
T Consensus 248 s~~~a~l~l~~L~tl~~r~~~~~~na~~~a~~L~~~p~v~~V~~P~l~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~~ 327 (403)
T PRK07503 248 SPFDAFLLMRGLKTLALRMDRHCASAQAVAEWLARHPAVELVHYPGLPSFAQHALAQRQMALPGGMIAFELKGGIAAGRR 327 (403)
T ss_pred CHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCCceEEEEECCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999998887777778999999994 5566789
Q ss_pred HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 315 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 315 l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+++.++.+....++|+..+++++|..++|..++++++...|+.++.||+|+|+|+.+++++.|.++|+++
T Consensus 328 ~~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~Al~~~ 397 (403)
T PRK07503 328 FMNALQLFARAVSLGDAESLAQHPASMTHSTYTPEERAEHGISEGLVRLSVGLEDVADILADLAQALDAC 397 (403)
T ss_pred HHHhCCcceeecccCCCCccCcCCCCCccccCCHHHHHhcCCCCCeEEEEEecCCHHHHHHHHHHHHHHH
Confidence 9999999888889999999999999999999999999999999999999999999999999999999764
No 33
>TIGR01324 cysta_beta_ly_B cystathionine beta-lyase, bacterial. This model represents cystathionine beta-lyase (alternate name: beta-cystathionase), one of several pyridoxal-dependent enzymes of cysteine, methionine, and homocysteine metabolism. This enzyme is involved in the biosynthesis of Met from Cys.
Probab=100.00 E-value=2.2e-48 Score=359.87 Aligned_cols=366 Identities=27% Similarity=0.453 Sum_probs=315.9
Q ss_pred eeeccCCC-CCCCCCcccceeeeeeeecCCCC----CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-H
Q 016612 12 LLMNFSNE-FDPYGALSTPLYQTATFKQPSAT----ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (386)
Q Consensus 12 ~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~----~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~ 85 (386)
++++.+.. ++..|++.||++++++|..++.. ....+.|++.|+|....+|+.++++.|.+++++++||++|+. +
T Consensus 2 ~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~Y~r~gnPt~~~lE~~lA~l~g~~~~~~~~sG~~Ai~~a 81 (377)
T TIGR01324 2 RLIHSGRQPRFSQGSVNPPLQRASTVLFDSHAAQRRAKGELTYGRRGTLTHFALQDAMCELEGGAGCYLYPSGLAAVTNS 81 (377)
T ss_pred eeEECCCCCCCCCCCccCCeeCCCceeeCChhhhcCCcCCCcccCCCCccHHHHHHHHHHHhCCCcEEEECcHHHHHHHH
Confidence 35666633 34479999999999999765432 234577999999999999999999999999999999999987 5
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la 165 (386)
+.+++++||+|+++++.|+++...+....+..|+++..++..+.++++++++++|++|++++|+||+|.+.|+++|.++|
T Consensus 82 l~all~~GD~Vl~~~~~y~~t~~~~~~~~~~~gi~v~~~d~~~~e~l~~~i~~~tklV~lesp~Np~g~~~dl~~I~~la 161 (377)
T TIGR01324 82 ILAFVKAGDHVLMVDSAYEPTRYFCDIVLKRMGVDITYYDPLIGEDIATLIQPNTKVLFLEAPSSITFEIQDIPAIAKAA 161 (377)
T ss_pred HHHhcCCCCEEEEcCCCcHHHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCcHHHHHHHHHHH
Confidence 67789999999999999988866554556778999998887666889999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
+++|+++|+|++|+.|....+.+.|+|+++.|++|+++|++++.+|+++++++ ..+.+.......|..+++..++..++
T Consensus 162 ~~~g~~livD~t~a~g~~~~pl~~gaDivv~S~tK~l~G~~d~~gG~v~~~~~-~~~~l~~~~~~~G~~l~p~~a~~~~r 240 (377)
T TIGR01324 162 RNPGIVIMIDNTWAAGLLFKPLEHGVDISIQAGTKYLVGHSDIMIGTVVANAR-TWDQLREHSYLMGQMVDADDAYTTLR 240 (377)
T ss_pred HHcCCEEEEECCCccccccCccccCceEEEecCceeccCCCCceEEEEEeCHH-HHHHHHHHHHHhCCCCCHHHHHHHHh
Confidence 99999999999999998888888999999999999999999888999988754 54555555566788999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--CHHhHHHHHhhcCcce
Q 016612 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVVETTKYFS 323 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l~~~g 323 (386)
+++.+..|+++..+++..+.++|++++.++.+++|+|+++|++.+..++.++.+++++|.+. +.+...++++.++..+
T Consensus 241 gl~tl~~R~~~~~~~a~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~~~~~l~~~~ 320 (377)
T TIGR01324 241 GLRTLGVRLKQHQESSLAIAKWLSEQPEVARVLHPALPSCPGHEFWKRDFSGSSGLFSFVLQRLTQKQVHAFLDHLQLFG 320 (377)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhCCCcCEEECCCCCCCccHHHHHHhccCCCceEEEEECCCCHHHHHHHHHhCCcce
Confidence 99999999999999999999999999999999999999999999887777788999999995 4566889999999999
Q ss_pred eccCCCCccccccccc-cccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 324 ITVSFGSVKSLISMPC-FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~-~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
+..+.|+..+++..|. .++|.. +...+..++.||+|+|+|+.+++++.|.++|++
T Consensus 321 ~~~slG~~~sl~~~~~~~~~~~~-----~~~~~~~~~liR~svGlE~~~dl~~dl~~al~~ 376 (377)
T TIGR01324 321 LGYSWGGYESLALCNQPELGHRP-----NIKRNLEGPLIRVHIGLENVDDLKADLKAGFEA 376 (377)
T ss_pred EeccCCCccceeecCCCCCCHHH-----HHhccCCCCEEEEEeCCCCHHHHHHHHHHHHhc
Confidence 9999999999986332 333322 234566678999999999999999999999975
No 34
>PRK05613 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=1.4e-48 Score=365.91 Aligned_cols=381 Identities=36% Similarity=0.516 Sum_probs=331.9
Q ss_pred CCCCCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCce
Q 016612 3 VEEEPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRA 73 (386)
Q Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~ 73 (386)
+..+..+++++++.|.. ++..|.+.||++++++|..++.. ....+.|++.++|..+.+++.++++.|.++.
T Consensus 8 ~~~~~~~~t~~~~~~~~~~~~~~~~~~Pi~~sstf~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~le~~la~l~g~~~~ 87 (437)
T PRK05613 8 NADQWGFETRSIHAGQSVDSDTSARNLPIYQTTSYVFDSAEHAKQRFALEDLGPIYSRLTNPTVEALENRIASLEGGVHA 87 (437)
T ss_pred ccccCCcchHheeCCCCCCCCCCCccCCEeCCCCcccCCHHHHHHhhccccCCceeeCccChHHHHHHHHHHHHhCCCeE
Confidence 44556677889999954 33579999999999999765532 2334679998999999999999999999999
Q ss_pred EEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC-CCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 74 LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 74 i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
++++||++|+. ++.+++++||+|++++..|+++...+...++..|+++++++ ..|+++++++++++|++|+++++.||
T Consensus 88 v~fsSG~~Ai~~al~~ll~~Gd~VI~~~~~y~~t~~~~~~~l~~~Gi~v~~vd~~~d~e~l~~~l~~~tk~V~~e~~~Np 167 (437)
T PRK05613 88 VAFASGQAAETAAILNLAGAGDHIVTSPRLYGGTETLFLVTLNRLGIEVTFVENPDDPESWQAAVQPNTKAFFGETFANP 167 (437)
T ss_pred EEeCCHHHHHHHHHHHhcCCCCEEEECCCccHHHHHHHHHHHHhcCeEEEEECCCCCHHHHHHhCCccCeEEEEECCCCC
Confidence 99999998886 56667899999999999999986666667788999999997 45899999999999999999999999
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChh------------
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER------------ 219 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~------------ 219 (386)
+|.+.|+++|.++|+++|+++|+|.+++.+....+...|+|++++|++|+++|++...+|+++.+.+.
T Consensus 168 ~~~v~di~~I~~la~~~gi~livD~t~a~g~~~~p~~~GaDivv~S~~K~l~G~gd~~gG~vv~~~~~~~~~~~~~~~~~ 247 (437)
T PRK05613 168 QADVLDIPAVAEVAHRNQVPLIVDNTIATAALVRPLELGADVVVASLTKFYTGNGSGLGGVLIDGGKFDWTVERDGKPVF 247 (437)
T ss_pred CCcccCHHHHHHHHHHcCCeEEEECCCccccccChHHhCCCEEEeeccceecCCCcceeEEEEecCcccccccccccccC
Confidence 99999999999999999999999999998887778888999999999999988766667877754220
Q ss_pred -----------------------HHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcce
Q 016612 220 -----------------------LAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKK 276 (386)
Q Consensus 220 -----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 276 (386)
..+.........|..+++..+|++.++++.+..|+++..+|+..+.++|++++.++.
T Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~l~~rgl~TL~lR~~~~~~nA~~lA~~L~~hp~V~~ 327 (437)
T PRK05613 248 PYFVTPDPAYHGLKYADLGAPAFGLKARAGLLRDTGATLSPFNAWVTAQGLDTLSLRLERHNENAIKVAEFLNNHEKVAK 327 (437)
T ss_pred CCCCCCccccccccccccchHHHHHHHHHHHHHhcCCCCCHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHcCCCcce
Confidence 001112344566889999999999999999999999999999999999999999999
Q ss_pred EecCCCCCCCchhhhhhcc-CCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhc
Q 016612 277 VNYAGLPEHPGHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 354 (386)
Q Consensus 277 ~~~~~l~~~~~~~i~~~~~-~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~ 354 (386)
+.+|+++++|++.+..++. .+.|++++|.++ +.+.+.+|++.++......+.|+..+++++|+..+|..++.+.+.+.
T Consensus 328 V~yPgl~~~p~~~~~~~~~~~g~gg~~sf~l~~~~~~~~~f~~~l~l~~~~~slG~~~sLv~~p~~~~h~~~~~~~~~~~ 407 (437)
T PRK05613 328 VNFAGLKDSPWYATKEKLGLKYTGSVLSFDIKGGKDEAWAFIDALKLHSNLANIGDVRSLVVHPATTTHSQSDEAGLARA 407 (437)
T ss_pred EECCCCCCCccHHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcceEccCCCCCchhhcCCCccCCccCCHHHHHhc
Confidence 9999999999999887763 567999999995 56778899999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 355 GLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 355 ~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
|+.++.||+|+|+|+.+++++.|.++|+.
T Consensus 408 Gi~~~liRlsvGlE~~~dLi~Dl~~Al~~ 436 (437)
T PRK05613 408 GITQATVRLSVGIEDIDDIIADLEGGFAA 436 (437)
T ss_pred CCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 99999999999999999999999999975
No 35
>PRK06767 methionine gamma-lyase; Provisional
Probab=100.00 E-value=2.2e-48 Score=363.05 Aligned_cols=372 Identities=38% Similarity=0.643 Sum_probs=323.6
Q ss_pred CCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 016612 6 EPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (386)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (386)
+.++++++++.|.. .+..|.+.||+++++++..++.. ....+.|++.++|..+++++.+++++|.++.+++
T Consensus 3 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~pt~~~Le~~lA~l~G~~~al~~ 82 (386)
T PRK06767 3 KKHMETALIHHGYTSEEHKGSLTPPLFQTSTFTFETAQQGEASFAGVDPSYIYSRLGNPTVKLFEERMAVLEGGEEALAF 82 (386)
T ss_pred CCCcccceeeCCCCCCCCCCCccCCccCccceecCCHHHHHHhhccCcCCccccCCCCcchHHHHHHHHHHhCCCcEEEE
Confidence 44577999999954 34479999999999999776532 2234678999999999999999999999999999
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc
Q 016612 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 77 ~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~ 155 (386)
++|++++. ++.+++++||+|+++++.|+++...+.......|+++..++..|++++++++++++++|++++|+||+|.+
T Consensus 83 ~sG~~Ai~~~l~al~~~Gd~Vv~~~~~y~~~~~~~~~~~~~~gi~~~~~~~~d~~~l~~~i~~~tklV~lesp~NptG~v 162 (386)
T PRK06767 83 GSGMAAISATLIGFLKAGDHIICSNGLYGCTYGFLEVLEEKFMITHSFCDMETEADIENKIRPNTKLIFVETPINPTMKL 162 (386)
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhhCcCceEEEEeCCCCCCcee
Confidence 99998886 55678999999999999999887776666777899998898889999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCC
Q 016612 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 235 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~ 235 (386)
.|+++|.++|+++|+++++|++|+.+....+...++|+++.|++|+++|+++.++|+++++++.+.+.........+..+
T Consensus 163 ~dl~~I~~la~~~g~~vivD~a~a~~~~~~pl~~g~Div~~S~sK~l~g~g~~~gG~v~~~~~~i~~~~~~~~~~~g~~~ 242 (386)
T PRK06767 163 IDLKQVIRVAKRNGLLVIVDNTFCSPYLQRPLELGCDAVVHSATKYIGGHGDVVAGVTICKTRALAEKIRPMRKDIGGIM 242 (386)
T ss_pred cCHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCcEEEecCcceecCCCCceeEEEEeChHHHHHHHHHHHHHhCCCC
Confidence 99999999999999999999999887777677789999999999999887765679999886655554455555566677
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHH
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKH 314 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~ 314 (386)
+++.+++.+++++.+..|+++..++++.+.++|++++.+..+.+| ++.+..++.++.+++++|.++ +.....+
T Consensus 243 ~~~~a~l~~~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p------~~~~~~~~~~~~gg~vsf~l~~~~~~~~~ 316 (386)
T PRK06767 243 APFDAWLLLRGLKTLAVRMDRHCDNAEKIVSFLKNHDAVEGVWYP------EGELASRQMKRGGGVISFSIKGGKEETQA 316 (386)
T ss_pred CHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECC------CcHHHHHhCCCCCceEEEEEcCCHHHHHH
Confidence 889899999999999999999999999999999999988777776 445555555677999999995 4566889
Q ss_pred HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 315 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 315 l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
+++.++..++.+++|+..+++.+|+.++|..++++++...|+.++.||+|+|+|+.+++++.|.++|.+
T Consensus 317 f~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~l~R~svGlE~~~dl~~dl~~al~~ 385 (386)
T PRK06767 317 FINDLHFITIAVSLGDTETLIQHPATMTHAAIPAELRQEMGIYDNLIRLSVGLESWEDIVSDLEQALKK 385 (386)
T ss_pred HHHhCCccEEecCCCCcCccccCCCccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 999999999999999999999999999999999999999999999999999999999999999999975
No 36
>PRK05939 hypothetical protein; Provisional
Probab=100.00 E-value=1.6e-48 Score=363.34 Aligned_cols=360 Identities=33% Similarity=0.525 Sum_probs=316.0
Q ss_pred CCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCC
Q 016612 23 YGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTG 93 (386)
Q Consensus 23 ~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g 93 (386)
.|++.||+++++++...+.. ....+.|++.|+|..+++++.++++.|.+..+++++|++|+. ++.+++++|
T Consensus 7 ~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~Y~r~g~p~~~~lE~~la~leg~~~~v~~ssG~~Ai~~~l~all~~G 86 (397)
T PRK05939 7 HGAVHKPIHTSVTYGYEDARDLIDVFQGKKPGFTYARQGTPTTAALEAKITKMEGGVGTVCFATGMAAIAAVFLTLLRAG 86 (397)
T ss_pred CCCccCCccCCCCeecCCHHHHHHhhcCCcCCCCcCCCCCHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHHcCCC
Confidence 58899999999999765432 123467999999999999999999999999999999999987 556689999
Q ss_pred CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 94 ~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
|+|+++++.|+++...+.. ++..|++++.++..|+++++++++++|++|++++|+||+|.+.|+++|.++|+++|+++|
T Consensus 87 d~Vv~~~~~y~~t~~~~~~-l~~~G~~v~~v~~~d~e~l~~~l~~~tklV~vesp~NptG~v~dl~~I~~la~~~gi~li 165 (397)
T PRK05939 87 DHLVSSQFLFGNTNSLFGT-LRGLGVEVTMVDATDVQNVAAAIRPNTRMVFVETIANPGTQVADLAGIGALCRERGLLYV 165 (397)
T ss_pred CEEEECCCccccHHHHHHH-HHhcCCEEEEECCCCHHHHHHhCCCCCeEEEEECCCCCCCCHHhHHHHHHHHHHcCCEEE
Confidence 9999999999988766643 567899999999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcCh-------h--------------HHHHHHHhhhhcC
Q 016612 174 VDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-------R--------------LAKELYFLQNAEG 232 (386)
Q Consensus 174 ~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~-------~--------------~~~~~~~~~~~~~ 232 (386)
+|++++.+...++...|+|+++.|++|+++|+++..+|+++.+.. . +.+.........|
T Consensus 166 vD~t~a~~~~~~~~~~gaDivv~S~sK~~~g~g~~igg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 245 (397)
T PRK05939 166 VDNTMTSPWLFRPKDVGASLVINSLSKYIAGHGNALGGAVTDTGLFDWSAYPNIFPAYRKGDPQQWGLTQIRKKGLRDMG 245 (397)
T ss_pred EECCcccccccCccccCCEEEEecCeecccCCCCeEEEEEecCcccccccccchhhhhhccchhhHHHHHHHHHHHHhcC
Confidence 999998887667778899999999999999887765565543211 0 1111112223567
Q ss_pred CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhH
Q 016612 233 SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 312 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 312 (386)
..+++..++++.++++.+..|+++..+|+..+.++|++++.++.+.+|+++++|.+.+......+.|++++|.+.+....
T Consensus 246 ~~~~p~~a~l~~rgl~tl~~R~~~~~~na~~la~~L~~~p~V~~V~yP~l~~~p~~~~~~~~~~g~g~l~sf~~~~~~~~ 325 (397)
T PRK05939 246 ATLSSEAAHRIAIGAETLALRVDRSCSNALALAQFLEAHPKVARVYYPGLASHPQHARATELFRHYGGLLSFELADGIDC 325 (397)
T ss_pred CCCCHHHHHHHHcCcCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCchHHHHHHhccCCceEEEEEeCCHHHH
Confidence 88999999999999999999999999999999999999999999999999999999998887788999999999766678
Q ss_pred HHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 313 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 313 ~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.++++.++......+.|+..+++++|+..++..++.+++...|+.++.||+|+|+|+.+++++.|.++|++
T Consensus 326 ~~f~~~l~l~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~lvR~svGlEd~~dLi~dl~~Al~~ 396 (397)
T PRK05939 326 FDFLNRLKLVIKATHLGDTRTLVIPVAPTIYYEMGAERRASMGIADSLIRVSVGIEDEADLIADFEQALDA 396 (397)
T ss_pred HHHHHhCCcceEccCCCCCCeeeecCcccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHhc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999975
No 37
>TIGR01325 O_suc_HS_sulf O-succinylhomoserine sulfhydrylase. This model describes O-succinylhomoserine sulfhydrylase, one of several related pyridoxal phosphate-dependent enzymes of cysteine and methionine metabolism. This enzyme is part of an alternative pathway of homocysteine biosynthesis, a step in methionine biosynthesis.
Probab=100.00 E-value=3.5e-48 Score=360.94 Aligned_cols=370 Identities=41% Similarity=0.670 Sum_probs=327.1
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~a 82 (386)
+..++.|...+.+|.+.+|+++++++..++.. ....+.|++.++|...++++.+++++|.++.+++++|++|
T Consensus 2 t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~~~~~~sG~~A 81 (380)
T TIGR01325 2 TLAIRGGKERTEFREHAEALFLTSSFVYDSAAHAADRFAGEIPGFVYSRYANPTVAAFEERIAALEGAERAVATATGMSA 81 (380)
T ss_pred ceeEECCCCCCCCCCccCCeeCCcceecCCHHHHHHhhccccCCcceecCCCchHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 45677775456688899999999998654421 2334668888889999999999999999999999999999
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHH
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
+. ++.+++++||+|+++++.|+++...+...++..|++++.++..|++++++++++++++|++++|+||+|.+.|+++|
T Consensus 82 i~~al~al~~~Gd~Vl~~~~~~~~t~~~~~~~~~~~g~~v~~v~~~d~~~l~~~i~~~tklV~le~p~np~g~~~dl~~I 161 (380)
T TIGR01325 82 IQAALMTLLQAGDHVVASRSLFGSTVGFISEILPRFGIEVSFVDPTDLNAWEAAVKPNTKLVFVETPSNPLGELVDIAAL 161 (380)
T ss_pred HHHHHHHHhCCCCEEEEecCCcchHHHHHHHHHHHhCCEEEEECCCCHHHHHHhcCCCceEEEEECCCCCCCeeeCHHHH
Confidence 87 55668899999999999998887666677788999999999999999999998899999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHH
Q 016612 162 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCW 241 (386)
Q Consensus 162 ~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (386)
.++|+++|+++|+|++|+.+....+...++|+++.|++|+++|++...+|++++++ ++.+.+.......+..+++..++
T Consensus 162 ~~la~~~gi~livD~a~~~~~~~~pl~~g~Divv~S~sK~l~g~g~~~gG~vv~~~-~~~~~l~~~~~~~g~~~~p~~a~ 240 (380)
T TIGR01325 162 AELAHAIGALLVVDNVFATPVLQQPLKLGADVVVYSATKHIDGQGRVMGGVIAGSE-ELMAEVAVYLRHTGPAMSPFNAW 240 (380)
T ss_pred HHHHHHcCCEEEEECCCcccccCCchhhCCCEEEeeccceecCCCCeEEEEEEeCH-HHHHHHHHHHHhhCCCCCHHHHH
Confidence 99999999999999999877766677789999999999999887655678888764 45555655555667788889999
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc
Q 016612 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 321 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 321 (386)
+++++++.+..|+++..++++.+.++|++++.++.+.+|++++.|.+.+..++..+.|++++|.+.+.+...+|++.++.
T Consensus 241 ~~l~~l~tl~~r~~~~~~~a~~la~~L~~~p~v~~V~yp~l~s~~~~~~~~~~~~g~g~~~s~~l~~~~~~~~f~~~l~~ 320 (380)
T TIGR01325 241 VLLKGLETLSLRMQKQFDSALAIAEWLQAQPQVQAVYYPGLPDHPQHELARRQQSGGGTVIGFDVADRAAAWKVLDAVEL 320 (380)
T ss_pred HHHhccCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCCCCCCccHHHHHhhCCCCceEEEEEECCHHHHHHHHHcCCc
Confidence 99999999999999999999999999999999999999999999999998887788899999999877778999999999
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
..+..+.|+..+++.+|+.++|..++++++...|+.++.||+|+|.|+.+++++.|+++|
T Consensus 321 ~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liR~svGlE~~~dl~~dl~~al 380 (380)
T TIGR01325 321 VSITNNLGDAKSTITHPATTTHGRMQPEERAAAGIGDGLVRLSVGLEDVDDLIADLKRAL 380 (380)
T ss_pred ceEcccCCCCCeeeeCCCccCcccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHhhC
Confidence 999999999999999999999999999999999999999999999999999999999986
No 38
>cd00614 CGS_like CGS_like: Cystathionine gamma-synthase is a PLP dependent enzyme and catalyzes the committed step of methionine biosynthesis. This pathway is unique to microorganisms and plants, rendering the enzyme an attractive target for the development of antimicrobials and herbicides. This subgroup also includes cystathionine gamma-lyases (CGL), O-acetylhomoserine sulfhydrylases and O-acetylhomoserine thiol lyases. CGL's are very similar to CGS's. Members of this group are widely distributed among all three forms of life.
Probab=100.00 E-value=2.4e-48 Score=361.57 Aligned_cols=359 Identities=54% Similarity=0.866 Sum_probs=324.6
Q ss_pred CCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCC
Q 016612 24 GALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGE 94 (386)
Q Consensus 24 g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~ 94 (386)
|.+.||+++++++..++.. ....+.|++.++|...++++.+++++|.++.++++||++|+. ++.+++++||
T Consensus 1 ~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~la~l~g~~~a~~~~sG~~Ai~~~l~~l~~~gd 80 (369)
T cd00614 1 GAVAPPIYQTSTFVFPSPAEAADLFALREGGYIYSRIGNPTVDALEKKLAALEGGEAALAFSSGMAAISTVLLALLKAGD 80 (369)
T ss_pred CCcCCCccCCCceecCCHHHHHHhhcCCcCCceeECCCChhHHHHHHHHHHHHCCCCEEEEcCHHHHHHHHHHHHcCCCC
Confidence 4678899999998765532 234577898899999999999999999999999999999987 5566889999
Q ss_pred EEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 95 EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 95 ~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
+|+++.+.|+++...+...++..|+++..++.+|++++++++++++++|++++|+||+|.+.|+++|.++|+++|+++++
T Consensus 81 ~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~g~~~dl~~i~~la~~~g~~liv 160 (369)
T cd00614 81 HVVASDDLYGGTYRLFERLLPKLGIEVTFVDPDDPEALEAAIKPETKLVYVESPTNPTLKVVDIEAIAELAHEHGALLVV 160 (369)
T ss_pred EEEECCCCcchHHHHHHHHHhhcCeEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCeecCHHHHHHHHHHcCCEEEE
Confidence 99999999999877766677789999999999999999999988999999999999999999999999999999999999
Q ss_pred eCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHH
Q 016612 175 DNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRV 254 (386)
Q Consensus 175 D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (386)
|++++.+....+...++|+++.|++|+++|++.+++|+++++++++.+.+.......+..+++..+++++++++.+..|+
T Consensus 161 D~t~~~~~~~~~~~~g~Divv~S~tK~l~g~~~~~gG~v~~~~~~l~~~l~~~~~~~g~~~~p~~a~~~l~~l~tl~~r~ 240 (369)
T cd00614 161 DNTFATPYLQRPLELGADIVVHSATKYIGGHSDVIAGVVVGSGEALIQRLRFLRLALGTILSPFDAWLLLRGLKTLPLRM 240 (369)
T ss_pred ECCCcchhcCChhhhCCcEEEeccceeccCCCCceEEEEEeCcHHHHHHHHHHHHhhCCCCCHHHHHHHHcCCCCHHHHH
Confidence 99999888767777899999999999998887788999999875677777766666778889999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKS 333 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~ 333 (386)
++..++++.+.++|++++.+..+.++++++.|.++++.+..++.+++++|.+. +.+...++++.++...+..+.|+..+
T Consensus 241 ~~~~~na~~la~~L~~~~~v~~V~~p~l~~~~~~~~~~~~~~g~g~i~s~~l~~~~~~~~~f~~~l~~~~~~~s~G~~~s 320 (369)
T cd00614 241 ERHSENALKVAEFLEKHPKVERVYYPGLPSHPQHELAKKQMSGYGGVFSFELKGGLEAAKKFLNALKLFSLAVSLGGVES 320 (369)
T ss_pred HHHHHHHHHHHHHHHcCCCccEEECCCCCCCchHHHHHHhcCCCceEEEEEeCCCHHHHHHHHHcCCcceEcccCCCCce
Confidence 99999999999999999988899999999999999888777788999999995 67778999999999999999999999
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
++++|+..+|..++.+++...|+.++.||+|+|.|+.+++++.|.++|+
T Consensus 321 l~~~~~~~~~~~~~~~~~~~~g~~~~liR~svGlE~~~dl~~dl~~al~ 369 (369)
T cd00614 321 LVEHPASMTHSQLPPEERAAAGITPGLVRLSVGIEDVEDLIADLEQALK 369 (369)
T ss_pred eeeCCcccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999999999974
No 39
>PRK05994 O-acetylhomoserine aminocarboxypropyltransferase; Validated
Probab=100.00 E-value=3.8e-48 Score=364.52 Aligned_cols=379 Identities=38% Similarity=0.592 Sum_probs=330.4
Q ss_pred CCCccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 016612 6 EPGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (386)
Q Consensus 6 ~~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (386)
++.+++.+++.+.. +.+.|.+.+|+++++++..++.. ....+.|++.++|...++++.++++.|.+..+++
T Consensus 5 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~al~~ 84 (427)
T PRK05994 5 SPGFATLAVHAGAQPDPTTGARATPIYQTTSFVFNDADHAASLFGLQAFGNIYTRITNPTNAVLEERVAALEGGTAALAV 84 (427)
T ss_pred CCCcchhheECCcCCCCCCCCccCCCcCCCCcccCCHHHHHHhhccccCCcceECCCCccHHHHHHHHHHHhCCCcEEEE
Confidence 34577889998833 44478999999999998765432 1223568888889999999999999999999999
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc
Q 016612 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 77 ~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~ 155 (386)
+||++|+. ++.+++++||+|+++.+.|++....+...+...|++++.++..|++++++++++++++|++++|+||+|.+
T Consensus 85 ~SG~~Ai~~al~all~pGd~VIv~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~ai~~~tklV~vesp~NptG~v 164 (427)
T PRK05994 85 ASGHAAQFLVFHTLLQPGDEFIAARKLYGGSINQFGHAFKSFGWQVRWADADDPASFERAITPRTKAIFIESIANPGGTV 164 (427)
T ss_pred cCHHHHHHHHHHHHhCCCCEEEEecCcchhHHHHHHHHHHhcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCee
Confidence 99999987 55668999999999999999887666666778999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcCh-----------------
Q 016612 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE----------------- 218 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~----------------- 218 (386)
.|+++|.++|+++|+++|+|++++.+....+...++|+++.|++|+++|+++..+|+++....
T Consensus 165 ~dl~~I~~la~~~gi~livD~a~a~~~~~~pl~~gaDivv~S~tK~lgg~~~~~gG~v~~~~~~~~~~~k~~~~~~~~~~ 244 (427)
T PRK05994 165 TDIAAIAEVAHRAGLPLIVDNTLASPYLIRPIEHGADIVVHSLTKFLGGHGNSMGGIIVDGGTFDWSKSGKYPMLSEPRP 244 (427)
T ss_pred cCHHHHHHHHHHcCCEEEEECCccccccCCccccCCcEEEEcCccccCCCCCcEEEEEEeCCccccccccccccccCCcc
Confidence 999999999999999999999999888878888899999999999999988877887774221
Q ss_pred h-----HHHH----------HHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCC
Q 016612 219 R-----LAKE----------LYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 283 (386)
Q Consensus 219 ~-----~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 283 (386)
. +.+. ........|..+++.+++++.++++.+..|+++..+++..+.++|++++.++.+.+|+++
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~A~l~~~~l~tL~~r~~~~~~~a~~la~~L~~~p~v~~v~yP~l~ 324 (427)
T PRK05994 245 EYHGLVLHETFGNFAFAIAARVLGLRDLGPAISPFNAFLILTGIETLPLRMQRHSDNALAVAEWLKGHPKVSWVNYAGLP 324 (427)
T ss_pred hhhhhhHHHHhhhhhhHHHHHHHHHHhcCCCCCHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCC
Confidence 0 1111 011233457789999999999999999999999999999999999999999999999999
Q ss_pred CCCchhhhhhc-cCCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeE
Q 016612 284 EHPGHELHYSQ-AKGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 361 (386)
Q Consensus 284 ~~~~~~i~~~~-~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 361 (386)
++|++.+..++ ..+.|++++|.+. +.+...++++.++...+..++|+..+++++|+.++|..++.+++...|+.++.|
T Consensus 325 ~~~~~~~~~~~~~~g~g~~~sf~l~~~~~~~~~~~~~l~l~~~~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~gi~~~li 404 (427)
T PRK05994 325 DDPYHALAQKYSPKGAGAVFTFGLKGGYEAGVKLVSSLKLFSHLANIGDTRSLVIHPASTTHRQLTDEQKVAAGAGPDVV 404 (427)
T ss_pred CCccHHHHHHhcCCCceEEEEEEecCCHHHHHHHHHhCCcceeccccCCCcceeeCCCCCCcccCCHHHHHhcCCCCCcE
Confidence 99999998776 4678999999994 556788999999999999999999999999999999999999999999999999
Q ss_pred EEEeccCChHHHHHHHHHHHhcC
Q 016612 362 RISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 362 Ris~~~~~~~~~i~~l~~~l~~~ 384 (386)
|+|+|+|+.+++++.|.++|+++
T Consensus 405 RlsvGlE~~~dli~dl~~Al~~~ 427 (427)
T PRK05994 405 RLSIGIEDVDDIIADLEQALAKA 427 (427)
T ss_pred EEEeccCCHHHHHHHHHHHHhhC
Confidence 99999999999999999999864
No 40
>PRK07050 cystathionine beta-lyase; Provisional
Probab=100.00 E-value=1.6e-47 Score=356.93 Aligned_cols=373 Identities=27% Similarity=0.439 Sum_probs=326.5
Q ss_pred CCccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeC
Q 016612 7 PGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (386)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~ 77 (386)
..+++.+++.|.. .+..|.+.+|++++++|..++.. ....+.|++.++|..+++++.++++.|.+++++++
T Consensus 8 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~~~~~~~~~Y~r~~~pt~~~Le~~lA~l~g~~~~l~~~ 87 (394)
T PRK07050 8 RALQTRIVQPDDQIPPGFRSFVTPVARASTVVFPDLATMRALDWRQDVQWRYGLHATPTSLALAQRLAEIEGGRHALLQP 87 (394)
T ss_pred CCccchheECCCCCCCCCCCccCCeeCCcceecCCHHHHHhhcccccCCcccCCCCCHHHHHHHHHHHHHhCCCeEEEec
Confidence 3456888998844 34479999999999999776542 23356799999999999999999999999999999
Q ss_pred cHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccc
Q 016612 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (386)
Q Consensus 78 ~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~ 156 (386)
||++|+. ++.+++++||+|+++++.|+++...+...+...|++++.++..+.++++++++++|++|++++|+||+|.+.
T Consensus 88 sgt~Ai~~~l~al~~~GD~Vl~~~~~y~~~~~~~~~~~~~~Gi~v~~vd~~~~~~l~~~i~~~tklV~le~p~Np~~~~~ 167 (394)
T PRK07050 88 SGLAAISLVYFGLVKAGDDVLIPDNAYGPNRDHGEWLARDFGITVRFYDPLIGAGIADLIQPNTRLIWLEAPGSVTMEVP 167 (394)
T ss_pred cHHHHHHHHHHHHhCCCCEEEEecCCcccHHHHHHHHHHhcCeEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCccHh
Confidence 9999987 556689999999999999999877666677889999999998788899999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCC
Q 016612 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA 236 (386)
Q Consensus 157 ~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~ 236 (386)
++++|.++|+++|+++++|++|+.+....+...|+|+++.|++|+++|+.++++|+++++++++.++++......|..++
T Consensus 168 di~~I~~ia~~~gi~livD~a~a~~~~~~~l~~GaDi~v~S~tK~~~g~~~~~gG~v~~~~~~~~~~~~~~~~~~G~~~~ 247 (394)
T PRK07050 168 DVPAITAAARARGVVTAIDNTYSAGLAFKPFEHGVDISVQALTKYQSGGSDVLMGATITADAELHAKLKLARMRLGIGVS 247 (394)
T ss_pred hHHHHHHHHHHcCCEEEEECCcccccccCHHHcCCeEEEEECCceecCCCCeeEEEEEECCHHHHHHHHHHHHhcCCCCC
Confidence 99999999999999999999999988888888899999999999999888888999998888888878777777788999
Q ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC---HHhHH
Q 016612 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSK 313 (386)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~ 313 (386)
++.+++++++++.+..|+++..+++..+.++|++++.+..+.+++++++|.+....++..+.+++++|.++. .+..+
T Consensus 248 ~~~a~l~lr~l~tl~~Rl~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~~~g~~~s~~l~~~~~~~~~~ 327 (394)
T PRK07050 248 ADDCSLVLRGLPSLQVRLAAHDRSALEVAEWLKARPEIATVLHPALPDCPGHAFWMRDFTGAGGLFSVVFDERYSPAQVD 327 (394)
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHHhCCCCceEEEEEECCCCCHHHHH
Confidence 999999999999999999999999999999999999999999999999998887776666789999999953 46789
Q ss_pred HHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 016612 314 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 314 ~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 385 (386)
++++.++..++..++|+..+++. |+..++.... + ....++.||+|+|+|+.+++++.|.++|+++.
T Consensus 328 ~~~~~l~~~~~~~s~G~~~sl~~-~~~~~~~~~~-~----~~~~~~~iR~svGlE~~~dl~~dl~~al~~~~ 393 (394)
T PRK07050 328 AFVEALELFAIGWSWGGACSLAM-PYDVASMRTA-K----WPHRGTLVRLYIGLEDEADLIADLEQALEAAL 393 (394)
T ss_pred HHHHcCCCCeeccccCCccceEe-eCcccccchh-h----cCCCCCEEEEEeCcCCHHHHHHHHHHHHHHhh
Confidence 99999999999999999999987 7765554432 1 12456899999999999999999999998753
No 41
>PRK07269 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=5.2e-47 Score=349.52 Aligned_cols=359 Identities=41% Similarity=0.683 Sum_probs=315.0
Q ss_pred CCCccceeeccCCCC-CCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH
Q 016612 6 EPGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA 84 (386)
Q Consensus 6 ~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~ 84 (386)
+..+++.+++.|... ...|.+.||++++++|..++......+.|++.++|...++++.++++.|.+++++++||++|+.
T Consensus 4 ~~~~~t~~~~~~~~~~~~~~~~~~pi~~~st~~~~~~~~~~~~~Y~R~~~p~~~~le~~lA~leg~~~~v~~~sG~aAi~ 83 (364)
T PRK07269 4 DLHINTILAQAGIKSDEATGALVTPLHFSTTYQHPEFGQSTGFDYTRTKNPTRAKLEETLAAIESADYALATSSGMSAIV 83 (364)
T ss_pred cCCcccceeeCCCCCCCCCCCccCCccCCcceecCCCCCcCCcceeCCCCccHHHHHHHHHHHhCCCeEEEeCCHHHHHH
Confidence 345678889988543 3478999999999999876644444577999999999999999999999999999999999998
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHH
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 164 (386)
+++.++++||+|+++.+.|++....+.......++++.+. .|+++++++++++|++|++++|+||+|.+.|+++|+++
T Consensus 84 ~~l~~l~~GD~VI~~~~~yg~~~~~~~~~~~~~~~~~~~~--~d~~~l~~~i~~~TklV~lesP~NPtg~~~di~~I~~l 161 (364)
T PRK07269 84 LAFSVFPVGSKVVAVRDLYGGSFRWFNQQEKEGRFHFTYA--NTEEELIAAIEEDTDIVYIETPTNPLMVEFDIEKVAKL 161 (364)
T ss_pred HHHHHhCCCCEEEEecCCcCchHHHHHHHHhcCcEEEEec--CCHHHHHHhcCcCceEEEEECCCCCCCeeeCHHHHHHH
Confidence 6667789999999999999988765544444445544443 48999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 165 a~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
|+++|+++++|++|+.+....+...++|+++.|++|+++|++.+.+|+++++++++.+.+.......|..+++..++++.
T Consensus 162 a~~~gi~vvvD~t~~~~~~~~pl~~gaDivv~S~tK~l~g~~d~~gG~v~~~~~~l~~~~~~~~~~~G~~~s~~~a~l~~ 241 (364)
T PRK07269 162 AHAKGAKVIVDNTFYSPIYQRPIELGADIVLHSATKYLSGHNDVLAGVVVTNDLELYEKLFYNLNTTGAVLSPFDSYLLM 241 (364)
T ss_pred HHHcCCEEEEECCCcccccCCchhhCCcEEEecCceeccCCCcccceEEEeCcHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999888777788889999999999999998887799999887778777766665667789999999999
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCccee
Q 016612 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSI 324 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi 324 (386)
++++.+..|+++..+++..+.++|++++.+..+++++ .+++++|.+.+.+...++++.++...+
T Consensus 242 ~~L~tL~~r~~~~~~na~~~a~~L~~~p~v~~v~ypg----------------~gg~~sf~~~~~~~~~~f~~~l~~~~~ 305 (364)
T PRK07269 242 RGLKTLSLRMERSTANAQEVVAFLKKSPAVKEVLYTG----------------KGGMISFKVADETRIPHILNSLKVFTF 305 (364)
T ss_pred cCCCcHHHHHHHHHHHHHHHHHHHHhCCCccEEeCCC----------------cCcEEEEEECCHHHHHHHHHhCCcceE
Confidence 9999999999999999999999999998877777764 378999999777778899999999999
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
..+.|+..+++.+|+..++..++++.+...|+.++.||+|+|.|+.+++++.|.++|+
T Consensus 306 ~~slG~~~sl~~~p~~~~~~~~~~~~r~~~Gi~~~liRlsvGlE~~~dli~dl~~al~ 363 (364)
T PRK07269 306 AESLGGVESLITYPTTQTHADIPAEVRHSYGLTDDLLRLSIGIEDARDLIADLKQALE 363 (364)
T ss_pred ccCCCCcCeEeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999999985
No 42
>TIGR01326 OAH_OAS_sulfhy OAH/OAS sulfhydrylase. This model describes a distinct clade of the Cys/Met metabolism pyridoxal phosphate-dependent enzyme superfamily. Members include examples of OAH/OAS sulfhydrylase, an enzyme with activity both as O-acetylhomoserine (OAH) sulfhydrylase (EC 2.5.1.49) and O-acetylserine (OAS) sulphydrylase (EC 2.5.1.47). An alternate name for OAH sulfhydrylase is homocysteine synthase. This model is designated subfamily because it may or may not have both activities.
Probab=100.00 E-value=6.4e-47 Score=356.27 Aligned_cols=373 Identities=39% Similarity=0.609 Sum_probs=321.3
Q ss_pred ccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcH
Q 016612 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (386)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (386)
+++.+++.+.. +...|.+.||+++++++..+... ....+.|++.++|..+++++.+++++|.++.+++++|
T Consensus 2 ~~t~~~~~~~~~~~~~~~~~~pi~~~~t~~~~~~~~~~~~~~~~~~~~~ysr~~~p~~~~le~~lA~l~g~~~~v~~~sG 81 (418)
T TIGR01326 2 FETLQLHAGQEPDPTTGSRAVPIYQTTSYVFDSTEHAAALFGLQEAGNIYSRLMNPTTDVLEQRIAALEGGVAALAVASG 81 (418)
T ss_pred ccceeEECCCCCCCCCCCccCCccCCCCeecCCHHHHHHhhccCcCCceeECCCChhHHHHHHHHHHHhCCCeEEEEccH
Confidence 45778888844 34468999999999998765432 1223568999999999999999999999999999999
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
++|+. ++.+++++||+|+++++.|+++...+...++..|++++.++..|++++++.+++++++|++++|+||+|.+.|+
T Consensus 82 ~~Ai~~al~~l~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~v~~~d~~~l~~~l~~~t~~V~le~p~NPtg~v~dl 161 (418)
T TIGR01326 82 QAAITYAILNLAQAGDNIVSSSYLYGGTYNLFKHTLKRLGIEVRFVDPDDPEEFEKAIDENTKAVFAETIGNPAINVPDI 161 (418)
T ss_pred HHHHHHHHHHHhCCCCEEEEECCCcHHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeecCH
Confidence 99986 55678999999999999998887777677788999999999889999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHH-----------------
Q 016612 159 RKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA----------------- 221 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~----------------- 221 (386)
++|.++|+++|+++|+|++++.+....+...++|+++.|++|+++|+ |.+.|+++++++.+.
T Consensus 162 ~~I~~la~~~~i~livD~t~~~~~~~~~l~~g~Divv~S~sK~l~g~-G~~lGg~v~~~~~~~~~~~~~~~~~~~~~~q~ 240 (418)
T TIGR01326 162 EAIAEVAHAHGVPLIVDNTFATPYLCRPIDHGADIVVHSATKYIGGH-GTAIGGVIVDGGKFDWANGRFPLFTTPDPSYH 240 (418)
T ss_pred HHHHHHHHHcCCEEEEECCCchhhcCCchhcCCeEEEECccccccCC-ccceEEEEEecccccccccccccccCCCCccc
Confidence 99999999999999999999887766677778999999999999765 456777666532210
Q ss_pred ---------------HHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCC
Q 016612 222 ---------------KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 286 (386)
Q Consensus 222 ---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 286 (386)
+.........|..+++..++.+.++++.+..|+++..+++..+.++|.+++.+..+.+|+++++|
T Consensus 241 a~~~~~~~~~~~~~~~~~~~~~~~~G~~~~p~~a~~~~~~l~tl~~R~~~~~~~a~~la~~L~~~~~V~~V~yP~l~~~~ 320 (418)
T TIGR01326 241 GLVFTETFGNPAFIVKARVQLLRDLGAALSPFNAFLLLQGLETLSLRMERHVENALKVAEFLEAHPKVAWVNYPGLASHP 320 (418)
T ss_pred cchhhhhhchhhHHHHHHHHHHHhcCCCCCHHHHHHHHCCcccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCc
Confidence 11111223346677899999999999999999999999999999999999999999999999999
Q ss_pred chhhhhhcc-CCCCceEEEEeC-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEE
Q 016612 287 GHELHYSQA-KGAGSVLSFLTG-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 364 (386)
Q Consensus 287 ~~~i~~~~~-~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 364 (386)
.+.+..++. .+.|++++|.+. +.+...++++.++......++|+..+++++|+.++|..++.+++...|+.+++||||
T Consensus 321 ~~~~~~~~~~~g~g~~~s~~l~~~~~~~~~f~~~l~l~~~~~slG~~~sl~~~~~~~~h~~~~~~~~~~~gi~~~liR~s 400 (418)
T TIGR01326 321 HHALAKKYLPKGFGAVLSFEIKGGREAGKKFIDALKLASHLANVGDAKSLVIHPASTTHQQLSEEEQLKAGVTPGLIRLS 400 (418)
T ss_pred cHHHHHHhccCCCcceEEEEecCCHHHHHHHHHhCCcceeccccCCCCceeeCCCCCCcccCCHHHHHhcCCCCCeEEEE
Confidence 998887665 678999999994 556678999999999999999999999999999999999999999999999999999
Q ss_pred eccCChHHHHHHHHHHHh
Q 016612 365 VGIEDVNDLISDLDKALR 382 (386)
Q Consensus 365 ~~~~~~~~~i~~l~~~l~ 382 (386)
+|+|+.+++++.|.++|+
T Consensus 401 vGlE~~~dl~~dl~~Al~ 418 (418)
T TIGR01326 401 VGIENIDDIIADLEQALE 418 (418)
T ss_pred ecCCCHHHHHHHHHHhhC
Confidence 999999999999999984
No 43
>PRK08247 cystathionine gamma-synthase; Reviewed
Probab=100.00 E-value=1.5e-46 Score=348.56 Aligned_cols=361 Identities=42% Similarity=0.718 Sum_probs=318.4
Q ss_pred CccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHH
Q 016612 8 GVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV 86 (386)
Q Consensus 8 ~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~ 86 (386)
.+++..++.|.. +...|.+.||++++++|..++......+.|++.++|...++++.++++.|.+..++++||++++.++
T Consensus 4 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~r~~~pt~~~le~~la~l~g~~~~~~~~sG~~ai~~~ 83 (366)
T PRK08247 4 TIETKLAQIGNRSDERTGTVNPPVYFSTAYRHEGIGESTGFDYSRTGNPTRGVLEQAIADLEGGDQGFACSSGMAAIQLV 83 (366)
T ss_pred CcchhheeCCCCCCCCCCCccCCcccCcccccCCCCCcCCccccCCCCchHHHHHHHHHHHhCCCcEEEEcCHHHHHHHH
Confidence 456778888844 3347999999999999977654334457799999999999999999999999889999999999877
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHH
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~ 166 (386)
+.++++||+|++++|.|++....+...++..|++++.++..|++++++++++++++|++++|+||+|...++++|.++|+
T Consensus 84 ~~ll~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i~~~tklv~le~P~NP~~~~~dl~~I~~la~ 163 (366)
T PRK08247 84 MSLFRSGDELIVSSDLYGGTYRLFEEHWKKWNVRFVYVNTASLKAIEQAITPNTKAIFIETPTNPLMQETDIAAIAKIAK 163 (366)
T ss_pred HHHhCCCCEEEEecCCcCcHHHHHHHHhhccCceEEEECCCCHHHHHHhcccCceEEEEECCCCCCCcHHHHHHHHHHHH
Confidence 78889999999999999998777777778899999999999999999999999999999999999999999999999999
Q ss_pred HcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhc
Q 016612 167 AHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (386)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (386)
++|+++|+|++|+.+....+...++|+++.|++|+++|++++++|+++++++.+.+.+...+...+..+++..++++.++
T Consensus 164 ~~g~~lIvD~t~~~~~~~~p~~~g~di~i~S~sK~~~g~~d~~~G~iv~~~~~l~~~~~~~~~~~g~~~s~~~a~l~~~~ 243 (366)
T PRK08247 164 KHGLLLIVDNTFYTPVLQRPLEEGADIVIHSATKYLGGHNDVLAGLVVAKGQELCERLAYYQNAAGAVLSPFDSWLLIRG 243 (366)
T ss_pred HcCCEEEEECCCccccccCchhcCCcEEEeecceeccCCCceeeeEEecChHHHHHHHHHHHHhcCCCCChHHHHHHHhc
Confidence 99999999999988877667677899999999999999888899999987667777777777777777888899999999
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceecc
Q 016612 247 VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV 326 (386)
Q Consensus 247 ~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~ 326 (386)
++.+..|+++..++++.+.++|++++.+..+.+++ .|++++|.+++.+...++++.++...+..
T Consensus 244 l~tl~~r~~~~~~~a~~l~~~L~~~p~v~~v~~P~----------------~gg~~sf~~~~~~~~~~~~~~l~~~~~~~ 307 (366)
T PRK08247 244 MKTLALRMRQHEENAKAIAAFLNEQPGVTDVLYPG----------------RGGMLSFRLQDEEWVNPFLKSLKLITFAE 307 (366)
T ss_pred cCcHHHHHHHHHHHHHHHHHHHHhCCCeeEEecCC----------------cCcEEEEEECCHHHHHHHHHcCCcceEcc
Confidence 99999999999999999999999887554444432 47899999877777789999999999999
Q ss_pred CCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 327 SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 327 ~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+.|+..+++.+|+.+++..++++.+...|+.++.+|+|+|+|+.+++++.|.++|+++
T Consensus 308 slg~~~sl~~~p~~~~~~~~~~~~r~~~gi~~~~~R~svGlE~~~dl~~dl~~al~~~ 365 (366)
T PRK08247 308 SLGGVESFITYPATQTHADIPEEIRIANGVCNRLLRFSVGIENVEDLIADLKQAFKQV 365 (366)
T ss_pred CCCCCceEEECCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999899999999999999999999999999999863
No 44
>PRK06434 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=2e-46 Score=345.77 Aligned_cols=365 Identities=35% Similarity=0.595 Sum_probs=321.5
Q ss_pred ccceeeccCCC-CCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcH
Q 016612 9 VSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (386)
Q Consensus 9 ~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (386)
+++..++.+.. ...+|.+.+|+++++++...... ....+.|++.++|..+++|+.++++.|.+.+++++||
T Consensus 9 ~~t~~~~~~~~~~~~~~~~~~pI~~ss~~~~~~~~~~~~~~~~~~~~~~Y~r~~~P~~~~lE~~la~leg~~~av~~sSG 88 (384)
T PRK06434 9 FNTRAVQSGELRDPRFGNVTTPIFETSTFVYPNSEKEAYMDSTRGMPYIYTRWGNPTVQAFEEKYAVLENAEHALSFSSG 88 (384)
T ss_pred cccceeECCCCCCCCCCCccCCeeCCcceecCChHHhhhccccccCCcceeCCCChhHHHHHHHHHHHhCCCcEEEeCCH
Confidence 56778888844 33479999999999998764431 1234678999999999999999999999999999999
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCCccccc
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~ 157 (386)
++|++ ++.+++++||+|+++.+.|+++...+...+...|+++++++.++.+.+. ++ +++++|++++++||++.+.|
T Consensus 89 ~aAi~~al~all~~GD~Vl~~~~~yg~t~~~~~~~~~~~Gi~v~fvd~~~~~~~~--l~~~~tklv~~e~~snpt~~v~D 166 (384)
T PRK06434 89 MGAITSAILSLIKKGKRILSISDLYGQTFYFFNKVLKTLGIHVDYIDTDRLNSLD--FDPSNYDLIYAESITNPTLKVPD 166 (384)
T ss_pred HHHHHHHHHHHhCCCCEEEEecCccchHHHHHHHHHHhcCcEEEEECCCChhhee--ecCCCeeEEEEEcCCCCCceeec
Confidence 99997 5677899999999999999988877767788999999999987655555 44 47999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCCh
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP 237 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~ 237 (386)
+++|.++|++++ +++|.+++.+....+...++|++++|.+|+++|++++.+|+++++++++.+.+.......|..+++
T Consensus 167 i~~I~~la~~~~--lvVD~t~~s~~~~~pl~~gaDivv~S~tK~i~G~~d~~gG~vv~~~~~~~~~~~~~~~~~G~~~~~ 244 (384)
T PRK06434 167 IKNVSSFCHEND--VIVDATFASPYNQNPLDLGADVVIHSATKYISGHSDVVMGVAGTNNKSIFNNLVERRKTLGSNPDP 244 (384)
T ss_pred HHHHHHHHHHcC--eEEECCCCCcccCCchhcCCCEEEeecccccCCCCCceEEEEecCcHHHHHHHHHHHHhcCCCCCH
Confidence 999999999998 567999988888888888999999999999999887789999888777777766665566788899
Q ss_pred hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHh
Q 016612 238 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 317 (386)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 317 (386)
.++++.+++++.+..|+++..+++..+.++|+.++.++.+++|+++ ++.+..++.|++++|.+++.+.+.+|++
T Consensus 245 ~~A~l~~~gL~tL~~R~~r~~~~a~~~a~~L~~~p~v~~V~yPgl~------~~~~~~~g~g~~~sf~l~~~~~~~~f~~ 318 (384)
T PRK06434 245 IQAYLALRGLKTLGLRMEKHNKNGMELARFLRDSKKISNVYYPDTE------IGKKVLRGFGGMLSFELRSMEDVHKFIR 318 (384)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHHcCCCccEEECCChH------HHHHhcCCCCceEEEEECCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999985 4445556789999999977777889999
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.++...+..+.|+..+++++|+.++|..++++++...|+.++.||+|+|+|+.+++++.|.++|.+
T Consensus 319 ~l~l~~~~~slG~~~sl~~~p~~~~h~~~~~e~~~~~gi~~~liRlsvGlEd~~dLi~dl~~Al~~ 384 (384)
T PRK06434 319 NLEIPMVAASLGGVESLITLPVETSHSSLSPEERERLGISDNLVRFSIGIEDIDDLIKDIENALSK 384 (384)
T ss_pred hCCcceEccCCCCCCeeeECCCccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999999999999999999999999999974
No 45
>PRK07582 cystathionine gamma-lyase; Validated
Probab=100.00 E-value=4.7e-46 Score=344.71 Aligned_cols=363 Identities=35% Similarity=0.530 Sum_probs=311.0
Q ss_pred CCccceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-
Q 016612 7 PGVSTLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (386)
Q Consensus 7 ~~~~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~- 84 (386)
+++++++++.+.. .+.+|.+.+|+++++++..+.......+.|+++++|...++++.++++. .++.+++++|++++.
T Consensus 2 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~y~ry~~p~~~~Le~~lA~l~-~~~~v~~~sG~~Ai~~ 80 (366)
T PRK07582 2 YGDGTRSVHAGGPEAVPGEPVLPGPVFAAPYHLSPGEPTGPDTYGRASNPTWRALEAALGELE-GAEALVFPSGMAAITA 80 (366)
T ss_pred CCcccceeeCCCCCCCCCCCccCCccccceEEccCccccCCceeECCCCccHHHHHHHHHHHc-CCCEEEECCHHHHHHH
Confidence 5778889998854 3347999999999999987643333456799999999999999999999 578999999999987
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHH
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 164 (386)
++.+++++||+|++++|.|+++...+...++..|++++.++..+... .+.+++++|++++|+||+|.+.|+++|.++
T Consensus 81 ~l~all~~Gd~Vl~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~~~~~---~~~~~t~lV~le~p~NPtg~v~di~~I~~~ 157 (366)
T PRK07582 81 VLRALLRPGDTVVVPADGYYQVRALAREYLAPLGVTVREAPTAGMAE---AALAGADLVLAETPSNPGLDVCDLAALAAA 157 (366)
T ss_pred HHHHhcCCCCEEEEeCCCcHhHHHHHHHHHhcCeEEEEEECCCChHH---HhccCceEEEEECCCCCCCCccCHHHHHHH
Confidence 45668999999999999998887655555667899999999765432 334689999999999999999999999999
Q ss_pred HHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 165 a~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
|+++|+++++|++|+.+....+.+.++|+++.|++|+++|++|+++|+++++++++.+.+.......+..++++.++++.
T Consensus 158 a~~~g~~lvVD~t~~~~~~~~p~~~g~Divv~S~sK~l~G~~g~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~a~l~~ 237 (366)
T PRK07582 158 AHAAGALLVVDNTTATPLGQRPLELGADLVVASDTKALTGHSDLLLGYVAGRDPELMAAVERWRLLAGAIPGPFEAWLAH 237 (366)
T ss_pred HHHcCCEEEEECCCCCccccCchhcCCcEEEecccccccCCCCeeEEEEEcCcHHHHHHHHHHHHHhCCCCCHHHHHHHH
Confidence 99999999999999765555566678999999999999999999999999877778777777777777888999999999
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCccee
Q 016612 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSI 324 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi 324 (386)
++++.+..|+++..+++..+.++|++++.+..+.+|+++++|++....++.++.|++++|.+++.+...++++.++....
T Consensus 238 r~l~tl~~R~~~~~~na~~la~~L~~~p~v~~v~yp~l~~~p~~~~~~~~~~~~gg~~s~~~~~~~~~~~~~~~l~~~~~ 317 (366)
T PRK07582 238 RSLGTLGLRFARQCANALAVAELLAGHPAVRGVRYPGLPGDPAHEVAARQMRRFGGLVSFELADAAAAERFVAASRLVVA 317 (366)
T ss_pred hccccHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCCccHHHHHhhCCCCcceEEEEeCCHHHHHHHHHhCCccee
Confidence 99999999999999999999999999999999999999999999999888888999999999888888899999999888
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
..+.|+..+++..+... ..+++++.||+|+|.|+.+++++.|.++|+++
T Consensus 318 ~~s~G~~~sl~~~~~~~-----------~~~~~~~liR~svGlE~~~dli~dl~~al~~~ 366 (366)
T PRK07582 318 ATSFGGVHTSADRRARW-----------GDAVPEGFVRLSCGIEDTDDLVADLERALDAL 366 (366)
T ss_pred cccCCCccchhhhHHHc-----------CCCCCCCeEEEEeccCCHHHHHHHHHHHHhhC
Confidence 99999987766433211 11245789999999999999999999999863
No 46
>PLN02242 methionine gamma-lyase
Probab=100.00 E-value=4.4e-46 Score=348.83 Aligned_cols=372 Identities=30% Similarity=0.454 Sum_probs=318.0
Q ss_pred ccceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CC----CCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 016612 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------EN----GPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (386)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~----~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (386)
+-+..++.+...+..+.+.||+++++++..++.. .. ..+.|++.++|..+++++.+++++|.+..+++
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~Pt~~~LE~~lA~l~g~~~~l~~ 97 (418)
T PLN02242 18 PAAALASARHEFGEHGGVNMSIEASATFTVMEPDTMRRMFSGELGPDRDFYIYSRHFNPTVLNLGRQMAALEGTEAAYCT 97 (418)
T ss_pred hHHHHhcCCCCCCCCCCccCCcccCCceecCCHHHHHHHhcccccccCCCccccCCCChhHHHHHHHHHHHhCCCeEEEE
Confidence 4477889896666568889999999999776532 11 23569999999999999999999999999999
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhh-cccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCCCCCc
Q 016612 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQ 153 (386)
Q Consensus 77 ~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~nptG 153 (386)
+||++|+. ++.+++++||+|++++|.|+++...+... .+..|++++.++..|++++++++++ ++++|++++|+||||
T Consensus 98 ~sG~~Ai~~al~al~~~GD~Vl~~~~~Y~~~~~~~~~~~~~~~G~~~~~~d~~d~e~l~~~i~~~~tklV~lesp~NPtG 177 (418)
T PLN02242 98 ASGMSAISSVLLQLCSSGGHVVASNTLYGGTHALLAHFLPRKCNITTTFVDITDLEAVKKAVVPGKTKVLYFESISNPTL 177 (418)
T ss_pred ccHHHHHHHHHHHHhCCCCEEEEcCCcHHHHHHHHHHhhhhccCceEEEcCCCCHHHHHHhcCcCCCEEEEEecCCCCCC
Confidence 99999987 56678999999999999998886554333 3458999999998899999999987 599999999999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh----
Q 016612 154 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---- 229 (386)
Q Consensus 154 ~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~---- 229 (386)
.+.|+++|.++|+++|+++|+|++|+. ...++...++|+++.|+||+++|++..++|++++++ .+.+.+.....
T Consensus 178 ~v~dl~~I~~la~~~gi~livDea~~~-~~~~~~~~g~divv~S~SK~l~g~g~~~gG~iv~~~-~li~~l~~~~~~~~~ 255 (418)
T PLN02242 178 TVADIPELARIAHEKGVTVVVDNTFAP-MVLSPARLGADVVVHSISKFISGGADIIAGAVCGPA-ELVNSMMDLHHGALM 255 (418)
T ss_pred cccCHHHHHHHHHHhCCEEEEECCCCc-cCCCHHHcCCcEEEEeCccccCCCCCceEEEEEcCH-HHHHHHHHHhhhhhh
Confidence 999999999999999999999999963 334556668999999999999887666689999764 45555554422
Q ss_pred hcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhcc---CCCCceEEEEe
Q 016612 230 AEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA---KGAGSVLSFLT 306 (386)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~---~~~~~~~~~~~ 306 (386)
..+..+++..+++...+++.+..|++++.++++.+.++|++++ ..+.+|+|+++|++.++.++. .+.|++++|.+
T Consensus 256 ~~g~~~~~~~A~l~~~~l~tl~~r~~~~~~~a~~la~~L~~~~--~~V~yP~l~~~p~~~~~~~~~~~~~g~g~~~sf~l 333 (418)
T PLN02242 256 LLGPTMNPKVAFELSERLPHLSLRMKEHCRRAMEYAKRMKELG--LKVIYPGLEDHPQHALLKSMANKGYGFGGLLCLDM 333 (418)
T ss_pred ccCCCCCHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHhCC--CEEECCCCCCCccHHHHHHhcccCCCceeEEEEEE
Confidence 3456777888888889999999999999999999999999985 388999999999999887665 47899999999
Q ss_pred CCHHhHHHHHhhcCcc----eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCC-hHHHHHHHHHHH
Q 016612 307 GSLALSKHVVETTKYF----SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-VNDLISDLDKAL 381 (386)
Q Consensus 307 ~~~~~~~~l~~~l~~~----gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~-~~~~i~~l~~~l 381 (386)
.+.+...+|++.++.. .+..+.|+..+++.+|+.+++..++.+++...|+.+++||||+|+|+ .+++++.|.++|
T Consensus 334 ~~~~~~~~f~~~l~~~~~~~~~~~slG~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGlE~~~~dli~dl~~al 413 (418)
T PLN02242 334 DTEERANRLMRYLQNSTQFGFMAVSLGYYETLMSCSGSSTSSELDPEEKAAAGISPGLVRMSVGYTGTLEQRWSQFEKAL 413 (418)
T ss_pred CCHHHHHHHHHHhhcccccceeeecCCCCCceeeCCCccccccCCHHHHHhcCCCCCeEEEEecCCCCHHHHHHHHHHHH
Confidence 8777889999999866 67899999999999999999999999999999999999999999995 999999999999
Q ss_pred hcC
Q 016612 382 RTG 384 (386)
Q Consensus 382 ~~~ 384 (386)
++.
T Consensus 414 ~~~ 416 (418)
T PLN02242 414 SAM 416 (418)
T ss_pred HHh
Confidence 864
No 47
>PRK05968 hypothetical protein; Provisional
Probab=100.00 E-value=1.8e-44 Score=336.47 Aligned_cols=366 Identities=34% Similarity=0.539 Sum_probs=315.9
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA 82 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~a 82 (386)
..+++..-....+|++.||++++++|..++.. ....+.|++.++|..+++++.+++++|.+..+++++|++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~Y~r~~~p~~~~le~~lA~l~g~~~av~~~sG~~A 90 (389)
T PRK05968 11 AALITAHDEGNAFDAVVPPIFQTSLFTFDSYDEMEDVYAGEKVRPIYSRGDNPTVRAFEEMLAKLEGAEDARGFASGMAA 90 (389)
T ss_pred hheeecCCCccCCCCccCCccCCcceecCCHHHHHHhhcCCCCCccccCCCChhHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 34566664455689999999999999775532 2334668888889999999999999999999999999999
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHH
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
+. ++.+++++||+|+++.+.|+++...+...+...|++++.++..|++++++++ +++++|++++|+|+++.+.|+++|
T Consensus 91 i~~al~al~~~Gd~Vl~~~~~y~~t~~~~~~~~~~~G~~v~~vd~~d~~~l~~~i-~~tklV~ie~pt~~~~~~~dl~~i 169 (389)
T PRK05968 91 ISSTVLSFVEPGDRIVAVRHVYPDAFRLFETILKRMGVEVDYVDGRDEEAVAKAL-PGAKLLYLESPTSWVFELQDVAAL 169 (389)
T ss_pred HHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCceEEEeCCCCHHHHHHhc-ccCCEEEEECCCCCCCcHHHHHHH
Confidence 86 5666889999999999999988777767778899999999999999999988 679999999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh-hhcCCCCChhhH
Q 016612 162 AEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDC 240 (386)
Q Consensus 162 ~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 240 (386)
.++|+++|+++|+|++++.+....+...+.|+++.|++|+++|++++++|+++.++ ++.+.+.... ...+..+++..+
T Consensus 170 ~~la~~~gi~vivD~a~a~~~~~~p~~~g~Divv~S~tK~l~g~~~~~gG~i~~~~-~~~~~l~~~~~~~~g~~~~~~~A 248 (389)
T PRK05968 170 AALAKRHGVVTMIDNSWASPVFQRPITLGVDLVIHSASKYLGGHSDTVAGVVAGSK-EHIARINAEAYPYLGAKLSPFEA 248 (389)
T ss_pred HHHHHHcCCEEEEECCCcchhccCchhcCCcEEEeeccccccCCCCeEEEEEEECH-HHHHHHHHHHHHhCCCCCChHHH
Confidence 99999999999999999888766677789999999999999988888899998764 4544444332 235567889999
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC
Q 016612 241 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 320 (386)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 320 (386)
++++.+++.+..|+++..++++.+.++|++++.++.+.+++++++|.. ...+.+++++|.+++.....++++.++
T Consensus 249 ~~~l~~L~tl~~r~~~~~~~a~~la~~L~~~p~v~~v~~p~l~~~~~~-----~~~g~g~~~sf~~~~~~~~~~f~~~L~ 323 (389)
T PRK05968 249 WLLLRGLRTLPLRMKAHEASALEIARRLKAHPVVERVCHPALANHPPA-----GLSGTSGLFSFIFREGIDVRAFADALK 323 (389)
T ss_pred HHHHcccCcHHHHHHHHHHHHHHHHHHHHhCCCccEEECCCCCCChHH-----hCCCCceEEEEEECCHHHHHHHHHhCC
Confidence 999999999999999999999999999999999989999999887732 235678999999975556889999999
Q ss_pred cceeccCCCCccccccccccccCCC-CCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 321 YFSITVSFGSVKSLISMPCFMSHAS-IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 321 ~~gi~~~~G~~~~~~~~p~~~~~~~-~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
..++.++.|+..++++ |+..++.. .+.+++...|+.++.||+|+|+|+.+++++.|+++|+++
T Consensus 324 ~~~~~~s~G~~~slv~-p~~~~~~~~~~~~~~~~~gi~~~liR~SvGlE~~~dl~~dl~~al~~~ 387 (389)
T PRK05968 324 LFRLGVSWGGHESLVV-PAEVVLQQKAQPNSAARFGVSPRSVRLHVGLEGTEALWADLEQALAAA 387 (389)
T ss_pred ccEEecCCCCCCceee-eCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHHHh
Confidence 9999999999999998 99888888 457888899999999999999999999999999999875
No 48
>COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=100.00 E-value=3.6e-32 Score=252.74 Aligned_cols=291 Identities=23% Similarity=0.276 Sum_probs=205.6
Q ss_pred cccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCc-HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 48 DYTRS-GNP-TRDALESLLAKLDKAD----RALCFTS-GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 48 ~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~-gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
.|.+. |.+ +|+++.+++.+.+|.+ +.|++|. +++|+. +++++++|||+|++++|.|+.+. ......|.
T Consensus 60 ~Y~~~~G~~~LReaia~~~~~~~~~~~~~~~eiivt~Ga~~al~~~~~a~~~pGDeVlip~P~Y~~y~----~~~~~~gg 135 (393)
T COG0436 60 HYTPSAGIPELREAIAEKYKRRYGLDVDPEEEIIVTAGAKEALFLAFLALLNPGDEVLIPDPGYPSYE----AAVKLAGG 135 (393)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCCcCHH----HHHHhcCC
Confidence 55566 987 8999999999998743 4355555 559987 67789999999999999999996 56678889
Q ss_pred EEEEeCCC--------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 120 VVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 120 ~~~~v~~~--------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
+++.++.. |+++++++++++||+|++++||||||.+++ +++|+++|++||++||.||+|..-.+.
T Consensus 136 ~~v~v~l~~~~~~f~~d~~~l~~~i~~ktk~i~ln~P~NPTGav~~~~~l~~i~~~a~~~~i~ii~DEiY~~l~yd~~~~ 215 (393)
T COG0436 136 KPVPVPLDEEENGFKPDLEDLEAAITPKTKAIILNSPNNPTGAVYSKEELKAIVELAREHDIIIISDEIYEELVYDGAEH 215 (393)
T ss_pred EEEEEeCCcCccCCcCCHHHHHhhcCccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEehhhhhcccCCCCc
Confidence 98888841 699999999999999999999999999985 889999999999999999998632221
Q ss_pred -CCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc------HHHH
Q 016612 185 -RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALR 253 (386)
Q Consensus 185 -~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 253 (386)
+... .+..|++.|+||.+ +.+|+|+||++++++.+.+.+..++.....+.+...+.++..+++. ....
T Consensus 216 ~s~~~~~~~~~~~i~i~s~SK~~-~mtGwRvG~~v~~~~~l~~~~~~~~~~~~~~~~~~~Q~aa~~aL~~~~~~~~~~~~ 294 (393)
T COG0436 216 PSILELAGARDRTITINSFSKTY-GMTGWRIGWVVGPPEELIAALRKLKSYLTSCAPTPAQYAAIAALNGPQSDEVVEEM 294 (393)
T ss_pred CCHhhcCCCcceEEEEecccccc-cccccceeEeecChHHHHHHHHHHHHhcccCCCHHHHHHHHHHhcCccchHHHHHH
Confidence 1111 24579999999999 5789999999998677777776666666556666666666555542 2222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-eC----CHHhHHHHHhhcCcceeccCC
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TG----SLALSKHVVETTKYFSITVSF 328 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~----~~~~~~~l~~~l~~~gi~~~~ 328 (386)
.+.+.++.+.+.+.+.+.. ++.+.. ...|.++.|. ++ +.+++.+++++. |+.+.+
T Consensus 295 ~~~~~~rrd~l~~~l~~~~--------------g~~~~~---~p~Ga~Y~~~~i~~~~d~~~f~~~Ll~~~---gV~v~P 354 (393)
T COG0436 295 REEYRERRDLLVEALNEIG--------------GLSVVK---PPEGAFYLFPKIPELLDSEEFAKKLLEEA---GVAVVP 354 (393)
T ss_pred HHHHHHHHHHHHHHHHhcC--------------Ceeecc---CCCeeEEEEeecCCCCCHHHHHHHHHHhC---CEEEec
Confidence 2345555555555555443 222221 0124455554 43 345666666665 566666
Q ss_pred CCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 329 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 329 G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
|..+.. ..++++||+|++. +..++.++++.+.++.
T Consensus 355 G~~Fg~--------------------~~g~~~vRis~~~~~~~l~~a~~rl~~~~~~ 391 (393)
T COG0436 355 GSGFGE--------------------PPGEGYVRLSLATSEETLEEALRRLARFLAE 391 (393)
T ss_pred ccccCC--------------------CCCCCeEEEEEecCHHHHHHHHHHHHHHHHh
Confidence 665321 0146899999965 6666666677666654
No 49
>COG0520 csdA Selenocysteine lyase/Cysteine desulfurase [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.7e-31 Score=245.47 Aligned_cols=300 Identities=27% Similarity=0.370 Sum_probs=218.8
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHH-HHHHHHHH-h---cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGM-AALAAVTH-L---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt-~al~~~~~-~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..++.++.+++++|++ +.|+++.|+ ++++.+.. + +++||+|++++.+|++....|..++++.|++++.++.+
T Consensus 67 ~~e~aRe~va~~~~a~~~~eIvft~~tT~aln~va~~l~~~~~~gdeIv~s~~EH~sn~~pw~~~~~~~Ga~v~~i~~~~ 146 (405)
T COG0520 67 LYEAAREAVARFLNADSSDEIVFTRGTTEALNLVARGLGRSLKPGDEIVVSDLEHHSNIVPWQELAKRTGAKVRVIPLDD 146 (405)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChhHHHHHHHHHhhhhhcCCCEEEEccCcchhhHHHHHHHHHhcCcEEEEEecCC
Confidence 5778999999999987 677777776 99986544 4 68999999999999999999999999999999999964
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
+.++++..++++|++|.+++.+|.||.+.|+++|+++||++|+++++|.+|+.|+.+ +..+.++|++++|.|||+
T Consensus 147 ~g~~~~~~~~~~i~~~Tklvais~vSn~tG~~~pv~~I~~la~~~ga~v~VDaaq~~~h~~idv~~l~~Df~afsgHKwl 226 (405)
T COG0520 147 DGLLDLDALEKLITPKTKLVALSHVSNVTGTVNPVKEIAELAHEHGALVLVDAAQAAGHLPIDVQELGCDFLAFSGHKWL 226 (405)
T ss_pred CCCcCHHHHHHhcCCCceEEEEECccccccccchHHHHHHHHHHcCCEEEEECccccCccCCCchhcCCCEEEEcccccc
Confidence 689999999999999999999999999999999999999999999999999999976 566789999999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhcC---------------------CCCChhhHHHH-HhcCCcHH-HHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEG---------------------SGLAPFDCWIC-LRGVKTMA-LRVEKQQD 259 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~-~~~~~~~~-~~~~~~~~ 259 (386)
.||.| +|+++++++.+.+ +.+.....+ .+......... ..+++.+. .-.+...+
T Consensus 227 ~gP~G--iGvLy~r~~~l~~-l~P~~~gg~~~~~~~~~~~~~~~~~p~rfe~gTpn~~~~i~l~aAl~~~~~ig~~~i~~ 303 (405)
T COG0520 227 LGPTG--IGVLYVRKELLEE-LEPFLGGGGMIEYVSRDEGVTLAELPLRFEAGTPNIAGAIGLAAALDYLLEIGMEAIEA 303 (405)
T ss_pred cCCCc--eEEEEEchHHHhh-cCCcccCCCceeeecccccccccCcchhhccCCchHHHHHhHHHHHHHHHHHhHHHHHH
Confidence 99988 7999998654433 322211111 11111111111 11111111 01122233
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
+.+.+.++ ....|.+++++.++.+....++++++|.+++. ....+...|...+|.++.|.++ ..|.
T Consensus 304 ~e~~L~~~----------~~~~L~~~~~v~i~g~~~~~r~~~vsF~v~~~-~~~dv~~~L~~~gI~vr~g~~c---a~p~ 369 (405)
T COG0520 304 HERELTEY----------LLEGLSELPGVEIYGPPDADRGGIVSFNVKGI-HPHDVATLLDEKGIAVRAGHHC---AQPL 369 (405)
T ss_pred HHHHHHHH----------HHHHHhcCCCeEEecCCcccCceEEEEEeCCC-CHHHHHHHHHhCCeEEEecccc---ccHH
Confidence 33333333 33446666677777654435689999999776 3677788888888999988762 2232
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+.. .+. .+.+|+|++..++++.|++|.++|++.
T Consensus 370 -~~~----------~~~-~~~iR~S~~~YNt~edid~l~~aL~~~ 402 (405)
T COG0520 370 -HRL----------LGV-DATIRASLHLYNTEEDVDRLLEALKKA 402 (405)
T ss_pred -HHh----------cCC-CCceEEEEeecCCHHHHHHHHHHHHHH
Confidence 111 122 333999999888888888888887764
No 50
>PLN02187 rooty/superroot1
Probab=99.97 E-value=2.8e-29 Score=239.41 Aligned_cols=330 Identities=13% Similarity=0.121 Sum_probs=205.6
Q ss_pred ccceeeccCCCCCC-CCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHH
Q 016612 9 VSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMA 81 (386)
Q Consensus 9 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~ 81 (386)
....+++++.++.. ++...+|......+.. .+.....+.|.+. |.+ +|+++.+++.+.++. +++++++++++
T Consensus 64 ~~~~vi~l~~Gdp~~~p~~~~~~~~~~~~~~-~~~~~~~~~Y~~~~G~~~lR~aiA~~~~~~~~~~~~~~~I~it~G~~~ 142 (462)
T PLN02187 64 VNKTILPLGHGDPSVYPCFRTCIEAEDAVVD-VLRSGKGNSYGPGAGILPARRAVADYMNRDLPHKLTPEDIFLTAGCNQ 142 (462)
T ss_pred CCCCeEECCCCCCCCCCCCCCCHHHHHHHHH-HHhCCCCCCCCCCCChHHHHHHHHHHHHHhcCCCCCcccEEEeCCHHH
Confidence 34556677755444 4433333221111111 1112334578776 775 788888888765543 24444444559
Q ss_pred HHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCc
Q 016612 82 ALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 153 (386)
Q Consensus 82 al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG 153 (386)
++.. +..+++|||.|++++|+|+.+. ..++..|.+++.++.. |+++++++++++++++++++|+||||
T Consensus 143 al~~~~~~l~~pGd~Vlv~~P~y~~y~----~~~~~~g~~~~~~~l~~~~~~~~d~~~l~~~~~~~~~~v~i~nP~NPTG 218 (462)
T PLN02187 143 GIEIVFESLARPNANILLPRPGFPHYD----ARAAYSGLEVRKFDLLPEKEWEIDLEGIEAIADENTVAMVVINPNNPCG 218 (462)
T ss_pred HHHHHHHHhcCCCCEEEEeCCCCccHH----HHHHHcCCEEEEEeCccccCCccCHHHHHHhcCCCcEEEEEeCCCCCCC
Confidence 9975 5557899999999999999885 4556788888887651 78999999988999999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC----C-C---CCCccEEEeccccccccCCCceEEEEEEcCh-hH-
Q 016612 154 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P-L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGE-RL- 220 (386)
Q Consensus 154 ~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~----~-~---~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~-~~- 220 (386)
.+++ +++|.++|+++|++||+||+|..-.+.. + . .....++++|+||.| +.+|+|+||+++.++ .+
T Consensus 219 ~v~s~e~l~~i~~~a~~~~i~iI~DE~Y~~l~f~~~~~~s~~~~~~~~~vi~l~SfSK~f-~~pGlRiG~~v~~~p~~~~ 297 (462)
T PLN02187 219 NVYSHDHLKKVAETARKLGIMVISDEVYDRTIFGDNPFVSMGKFASIVPVLTLAGISKGW-VVPGWKIGWIALNDPEGVF 297 (462)
T ss_pred CccCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCceeHHHhccCCcEEEEecchhhc-CCccceeEEEEecCchhHH
Confidence 9986 7889999999999999999987432211 1 1 112478999999998 556899999998543 22
Q ss_pred --HHHHHHhhhhcCC--CCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhh
Q 016612 221 --AKELYFLQNAEGS--GLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 291 (386)
Q Consensus 221 --~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~ 291 (386)
.+.+......... ..+...+.++...++ .+....+.+.++.+.+.+.|++.+ .+. .
T Consensus 298 ~~~~~~~~~~~~~~~~~~~s~~~Q~a~~~~L~~~~~~~l~~~~~~l~~~r~~l~~~L~~~~--------~~~-------~ 362 (462)
T PLN02187 298 ETTKVLQSIKQNLDVTPDPATIIQAALPAILEKADKNFFAKKNKILKHNVDLVCDRLKDIP--------CVV-------C 362 (462)
T ss_pred HHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCC--------CCc-------C
Confidence 2334333333222 234555555544442 122233444445555555555432 110 0
Q ss_pred hhccCCCCceEEEEeCCH------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe
Q 016612 292 YSQAKGAGSVLSFLTGSL------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 365 (386)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 365 (386)
... +..+.++++.++.. ...+.+.+.+...|+.+.+|..+. .+++|||++
T Consensus 363 ~~~-P~gg~fl~~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pG~~fg-----------------------~~~~iRis~ 418 (462)
T PLN02187 363 PKK-PESCTYLLTKLELSLMDNIKDDIDFCVKLAREENLVFLPGDALG-----------------------LKNWMRITI 418 (462)
T ss_pred CCC-CCEeEEEEeecChhhCCCCCCHHHHHHHHHhhCCEEEECccccC-----------------------CCCeEEEEe
Confidence 001 11245566655311 122333444466788888876521 257899999
Q ss_pred cc--CChHHHHHHHHHHHhc
Q 016612 366 GI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 366 ~~--~~~~~~i~~l~~~l~~ 383 (386)
+. +.+++.+++|.+++++
T Consensus 419 ~~~~e~l~~al~rL~~~l~~ 438 (462)
T PLN02187 419 GVEAHMLEDALERLKGFCTR 438 (462)
T ss_pred CCCHHHHHHHHHHHHHHHHH
Confidence 84 6667778888877754
No 51
>PRK06207 aspartate aminotransferase; Provisional
Probab=99.97 E-value=5.7e-29 Score=234.63 Aligned_cols=296 Identities=19% Similarity=0.178 Sum_probs=200.1
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
....|++. |.+ +|+++.+++++.+|.+ +.|++++| ++++.. +..++++||+|++++|+|+.+. .+++.
T Consensus 70 ~~~~Y~~~~G~~~LR~aia~~l~~~~g~~~~~~~~I~it~Ga~~al~~~~~~l~~~Gd~Vlv~~P~y~~~~----~~~~~ 145 (405)
T PRK06207 70 GVQAYTEYRGDADIRELLAARLAAFTGAPVDAADELIITPGTQGALFLAVAATVARGDKVAIVQPDYFANR----KLVEF 145 (405)
T ss_pred CCccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHH
Confidence 34578876 776 8999999999987742 34555555 588874 5557899999999999998875 55667
Q ss_pred CCcEEEEeCCC----------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 117 TGVVVKRVNTC----------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 117 ~g~~~~~v~~~----------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
.|.+++.++.+ |++++++.++++++++++++|+||||.+.+ +++|.++|+++|++||+||+|+...+
T Consensus 146 ~g~~v~~v~~~~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~e~l~~l~~~a~~~~~~iI~De~Y~~~~~ 225 (405)
T PRK06207 146 FEGEMVPVQLDYLSADKRAGLDLDQLEEAFKAGVRVFLFSNPNNPAGVVYSAEEIAQIAALARRYGATVIVDQLYSRLLY 225 (405)
T ss_pred cCCEEEEEeccccCcccCCCcCHHHHHHhhhhcCeEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 78888777642 788999988888999999999999999996 77899999999999999999874321
Q ss_pred -----cCCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----H
Q 016612 184 -----SRPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----M 250 (386)
Q Consensus 184 -----~~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 250 (386)
.... ..+..+++.|+||.+ +.+|+|+||++++ +.+.+.+...........+...+.++...++. +
T Consensus 226 ~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~lpGlRiG~ii~~-~~l~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~ 303 (405)
T PRK06207 226 DGTSYTHLRALPIDPENVITIMGPSKTE-SLSGYRLGVAFGS-PAIIDRMEKLQAIVSLRAAGYSQAVLRTWFSEPDGWM 303 (405)
T ss_pred CCCCCCchhcCCCCcCcEEEEecchhhc-cCcccceEEEEcC-HHHHHHHHHHHhHhccCCCHHHHHHHHHHHhCcHHHH
Confidence 1111 124569999999999 5558999999986 55666565554444334444444444444322 2
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcC-cceeccCC
Q 016612 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSF 328 (386)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~-~~gi~~~~ 328 (386)
..+.+...++.+.+.+.+++.+ ++.+. . +..|.++++.++. ......+.+.+. ..|+.+.+
T Consensus 304 ~~~~~~~~~~r~~l~~~L~~~~--------------~~~~~--~-p~gg~fl~~~l~~~~~~~~~~~~~l~~~~gV~v~p 366 (405)
T PRK06207 304 KDRIARHQAIRDDLLRVLRGVE--------------GVFVR--A-PQAGSYLFPRLPRLAVSLHDFVKILRLQAGVIVTP 366 (405)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--------------Cceec--C-CCeeEEEEEeCcccCCCHHHHHHHHHHhcCEEEeC
Confidence 3333334444444444443321 11111 1 1125677777753 223456666664 56888888
Q ss_pred CCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 329 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 329 G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
|..+. +..++++|||++. +.+++.+++|.+++++.
T Consensus 367 G~~F~---------------------~~~~~~~Ris~~~~~~~l~~al~rl~~~l~~~ 403 (405)
T PRK06207 367 GTEFS---------------------PHTADSIRLNFSQDHAAAVAAAERIAQLIERY 403 (405)
T ss_pred chHhC---------------------CCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 76521 0125789999985 66667777777777653
No 52
>PRK05957 aspartate aminotransferase; Provisional
Probab=99.97 E-value=9.4e-29 Score=232.31 Aligned_cols=294 Identities=18% Similarity=0.206 Sum_probs=200.0
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
..|... |.+ +++++++++++.+|. ++.+++++|+ +++. ++..++++||+|++++|.|..+. ..++..|
T Consensus 59 ~~Y~~~~G~~~lr~~~~~~l~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g 134 (389)
T PRK05957 59 HKYQAVQGIPPLLEAITQKLQQDNGIELNNEQAIVVTAGSNMAFMNAILAITDPGDEIILNTPYYFNHE----MAITMAG 134 (389)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcCHH----HHHHhcC
Confidence 567776 776 899999999998875 3456666665 8886 45567899999999999998875 3446789
Q ss_pred cEEEEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----C
Q 016612 119 VVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----R 185 (386)
Q Consensus 119 ~~~~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-----~ 185 (386)
++++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|....+. .
T Consensus 135 ~~~~~v~~~~~~~~d~~~l~~~i~~~~klv~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~li~De~y~~~~~~~~~~~~ 214 (389)
T PRK05957 135 CQPILVPTDDNYQLQPEAIEQAITPKTRAIVTISPNNPTGVVYPEALLRAVNQICAEHGIYHISDEAYEYFTYDGVKHFS 214 (389)
T ss_pred CEEEEeecCCCCCcCHHHHHHhcCcCceEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEeccchhccCCCCCccC
Confidence 999888764 789999999889999999999999999997 889999999999999999998632211 1
Q ss_pred C----CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHHH
Q 016612 186 P----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQ 257 (386)
Q Consensus 186 ~----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 257 (386)
. ......+++.|+||.+ |.+|+|+||++++ +.+.+.+.........+.+...+.++...+.. +....+.+
T Consensus 215 ~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 292 (389)
T PRK05957 215 PGSIPGSGNHTISLYSLSKAY-GFASWRIGYMVIP-IHLLEAIKKIQDTILICPPVVSQYAALGALQVGKSYCQQHLPEI 292 (389)
T ss_pred hhhCCCccCcEEEEecchhhc-cCccceeEEEecC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCChHHHHHHHHHH
Confidence 1 1223579999999999 6678999999986 45666666555444444454555554444432 22223334
Q ss_pred HHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCcccccc
Q 016612 258 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLIS 336 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~ 336 (386)
.++.+.+.+.|++.+ ++ ..+. . ...+.++++.++......++.+.+. ..|+.+.+|..+..
T Consensus 293 ~~~r~~l~~~L~~~~--------~~-----~~~~--~-~~gg~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~~f~~-- 354 (389)
T PRK05957 293 AQVRQILLKSLGQLQ--------DR-----CTLH--P-ANGAFYCFLKVNTDLNDFELVKQLIREYRVAVIPGTTFGM-- 354 (389)
T ss_pred HHHHHHHHHHHHhcC--------CC-----cccc--C-CCeeEEEEEeCCCCCChHHHHHHHHHHCCEEEccchhhCC--
Confidence 444444555554322 10 0111 1 1124556666654333556666664 46888888775320
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 337 MPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 337 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
..++++|||++. +++++.++.|.+.+++
T Consensus 355 -------------------~~~~~iRis~~~~~~~~l~~~~~~l~~~~~~ 385 (389)
T PRK05957 355 -------------------KNGCYLRIAYGALQKATAKEGIERLVQGLKT 385 (389)
T ss_pred -------------------CCCCEEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 024689999974 4456677777776654
No 53
>KOG0257 consensus Kynurenine aminotransferase, glutamine transaminase K [Amino acid transport and metabolism]
Probab=99.97 E-value=2.8e-30 Score=228.36 Aligned_cols=251 Identities=22% Similarity=0.255 Sum_probs=180.3
Q ss_pred ceeec-cCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHH-HH
Q 016612 11 TLLMN-FSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGM-AA 82 (386)
Q Consensus 11 ~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt-~a 82 (386)
+...+ |||+ +...++|.+.+.+..+ .+.....++|++. |.| +++.|++.+++++|. ++.|++|.|. ++
T Consensus 30 ~~~~~~LgqG---fp~~~~P~fv~ea~~~-~~~~~~~~qYt~~~G~p~L~~aL~k~~se~~~~~~~~~~eVlVT~GA~~a 105 (420)
T KOG0257|consen 30 HKVPNPLGQG---FPDFPPPKFVTEAAKN-AAKEPSTNQYTRGYGLPQLRKALAKAYSEFYGGLLDPDDEVLVTAGANEA 105 (420)
T ss_pred cCCCCcccCC---CCCCCCcHHHHHHHHH-HhccchhccccccCCchHHHHHHHHHHHHHhccccCCcccEEEecCchHH
Confidence 34445 8877 4555566555433332 2222356788887 998 899999999998875 3667777776 99
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------------CHHHHHhhhCCCceEEEEeCC
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~~~~~~~~v~~~~~ 148 (386)
+. ++++++++||+|++.+|.|.+|. ...+..|...+.++.. |.++++.+++++|++|++++|
T Consensus 106 i~~~~~~l~~~GDeVii~eP~fd~Y~----~~~~maG~tpv~v~~~~~~g~~~s~~~~~D~~~le~~~t~kTk~Ii~ntP 181 (420)
T KOG0257|consen 106 ISSALLGLLNPGDEVIVFEPFFDCYI----PQVVMAGGTPVFVPLKPKEGNVSSSDWTLDPEELESKITEKTKAIILNTP 181 (420)
T ss_pred HHHHHHHHcCCCCEEEEecCcchhhh----hHHhhcCCcceeeccccccccccCccccCChHHHHhhccCCccEEEEeCC
Confidence 86 89999999999999999999996 4556777777777643 899999999999999999999
Q ss_pred CCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---------CCCCCCccEEEeccccccccCCCceEEEEEEc
Q 016612 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 149 ~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---------~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~ 216 (386)
|||||.+++ |++|+++|++||+++|.|++|..-.+. .|...+..+.++|++|++ |..|+|.||+++
T Consensus 182 hNPtGkvfsReeLe~ia~l~~k~~~lvisDevYe~~v~d~~~h~r~aslPgm~ertitvgS~gKtf-~~TGWrlGW~ig- 259 (420)
T KOG0257|consen 182 HNPTGKVFSREELERIAELCKKHGLLVISDEVYEWLVYDGNKHIRIASLPGMYERTITVGSFGKTF-GVTGWRLGWAIG- 259 (420)
T ss_pred CCCcCcccCHHHHHHHHHHHHHCCEEEEEhhHhHHHhhCCCcceeeecCCchhheEEEecccccee-eeeeeeeeeeec-
Confidence 999999986 889999999999999999997532211 244456789999999999 667899999999
Q ss_pred ChhHHHHHHHhhhhcCC-CCChhhHHHHHh---cC--------CcHHHHHHHHHHHHHHHHHHHhhC
Q 016612 217 GERLAKELYFLQNAEGS-GLAPFDCWICLR---GV--------KTMALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 217 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~--------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (386)
++.+......+...... ..++.+.+.+.. .+ .........+.++.+.+.+.|.+.
T Consensus 260 p~~L~~~~~~vh~~~~~~~~Tp~q~A~a~a~~~~~~~~~p~~~y~~~~~~~~y~~krdil~k~L~~l 326 (420)
T KOG0257|consen 260 PKHLYSALFPVHQNFVFTCPTPIQEASAAAFALELACLQPGGSYFITELVKEYKEKRDILAKALEEL 326 (420)
T ss_pred hHHhhhhHHHHhhccccccCcHHHHHHHHHHhhhhhccCCcchhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 56665555554443332 233333322211 11 111224555666777777777654
No 54
>PRK07324 transaminase; Validated
Probab=99.97 E-value=6.6e-29 Score=231.79 Aligned_cols=293 Identities=20% Similarity=0.192 Sum_probs=191.7
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEE
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 121 (386)
....|++. |.+ +++++.+++.. ...++.++++++++++. ++.+++++||+|+++.|.|+.+. .+++..|.++
T Consensus 54 ~~~~Y~~~~G~~~lr~~ia~~~~~-~~~~~vi~t~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~g~~v 128 (373)
T PRK07324 54 KKLTYGWIEGSPEFKEAVASLYQN-VKPENILQTNGATGANFLVLYALVEPGDHVISVYPTYQQLY----DIPESLGAEV 128 (373)
T ss_pred CCccCCCCCCCHHHHHHHHHHhcC-CChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEE
Confidence 44578876 776 45555544421 12234555555568887 55668899999999999998875 5566788899
Q ss_pred EEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----CCC
Q 016612 122 KRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL 187 (386)
Q Consensus 122 ~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~~~ 187 (386)
+.++.+ |++++++.++++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|..-... +..
T Consensus 129 ~~v~~~~~~~~~~d~~~l~~~~~~~~kli~i~~p~NPtG~~~~~~~l~~i~~~a~~~~~~ii~De~y~~l~~~~~~~s~~ 208 (373)
T PRK07324 129 DYWQLKEENGWLPDLDELRRLVRPNTKLICINNANNPTGALMDRAYLEEIVEIARSVDAYVLSDEVYRPLDEDGSTPSIA 208 (373)
T ss_pred EEEecccccCCCCCHHHHHHhCCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCCChh
Confidence 888752 788999888889999999999999999998 889999999999999999998632221 111
Q ss_pred C-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHH----HHHHHHHH
Q 016612 188 E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRV----EKQQDNAQ 262 (386)
Q Consensus 188 ~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 262 (386)
. .+..+++.|+||.+ |.+|+|+||++++ +.+.+.+...+.......+...+.++...++...... +...++.+
T Consensus 209 ~~~~~~I~~~s~SK~~-~~~G~RiG~i~~~-~~li~~~~~~~~~~~~~~~~~~q~~a~~~l~~~~~~l~~~~~~~~~~~~ 286 (373)
T PRK07324 209 DLYEKGISTNSMSKTY-SLPGIRVGWIAAN-EEVIDILRKYRDYTMICAGVFDDMLASLALEHRDAILERNRKIVRTNLA 286 (373)
T ss_pred hccCCEEEEecchhhc-CCccceeEEEecC-HHHHHHHHHHhCcEEecCChHHHHHHHHHHcCHHHHHHHHHHHHHHHHH
Confidence 1 24568999999999 5568999999985 6666666666554434445555555555444322222 22333444
Q ss_pred HHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhc-CcceeccCCCCccccccccccc
Q 016612 263 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 263 ~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
.+.+++++.+ +.... .+. .+.++++.++......++.+++ ...|+.+.+|..+.
T Consensus 287 ~l~~~l~~~~--------------~~~~~--~p~-gg~~~~i~~~~~~~~~~~~~~ll~~~gv~v~pg~~F~-------- 341 (373)
T PRK07324 287 ILDEWVAKEP--------------RVSYV--KPK-AVSTSFVKLDVDMPSEDFCLKLLKETGVLLVPGNRFD-------- 341 (373)
T ss_pred HHHHHHhcCC--------------CceEE--CCC-ceEEEEEEeCCCCCHHHHHHHHHHhcCEEEECccccC--------
Confidence 4444444322 11111 111 1333444444322344555554 45677777776521
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 342 SHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
.++++|||++. +..++.+++|.++++++
T Consensus 342 ---------------~~~~iRis~~~~~~~l~~~l~rl~~~l~~~ 371 (373)
T PRK07324 342 ---------------LEGHVRIGYCCDTETLKKGLKKLSEFLREF 371 (373)
T ss_pred ---------------CCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 14679999974 66777788888887764
No 55
>PRK06290 aspartate aminotransferase; Provisional
Probab=99.97 E-value=1.3e-28 Score=231.86 Aligned_cols=322 Identities=15% Similarity=0.136 Sum_probs=208.6
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCc-hHHHHHHHHHhhcCCC-----ceEEeCcHH-HH
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNP-TRDALESLLAKLDKAD-----RALCFTSGM-AA 82 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~-~~~~l~~~l~~~~g~~-----~~i~~~~gt-~a 82 (386)
....++++.+...++. ++.... .+.. .+.......|...|.+ +++++.+++.+.+|.+ +.|++++|+ ++
T Consensus 43 ~~~~i~L~~g~p~~~~--~~~~~~-~l~~-~~~~~~~~~Y~~~G~~~lr~aia~~~~~~~g~~~~~~~~~I~it~Gs~~a 118 (410)
T PRK06290 43 DMELIDMGVGEPDEMA--DESVVE-VLCE-EAKKPENRGYADNGIQEFKEAAARYMEKVFGVKDIDPVTEVIHSIGSKPA 118 (410)
T ss_pred CCCeEEcCCCCCCCCC--CHHHHH-HHHH-HHhCCCCCCCCCCCcHHHHHHHHHHHHHHcCCCcCCCcceEEEccCHHHH
Confidence 3456778866555552 222211 1111 1111223457655776 7888888888766532 357777776 88
Q ss_pred HHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCcc
Q 016612 83 LAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 83 l~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~ 154 (386)
+.. +..++++||.|++++|.|+.+. ..++..|.+++.++.+ |++++++.+.+++++|++++|+||||.
T Consensus 119 l~~~~~~~~~~gd~Vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~ 194 (410)
T PRK06290 119 LAMLPSCFINPGDVTLMTVPGYPVTG----THTKYYGGEVYNLPLLEENNFLPDLDSIPKDIKEKAKLLYLNYPNNPTGA 194 (410)
T ss_pred HHHHHHHhCCCCCEEEEeCCCCccHH----HHHHHcCCEEEEEecCCCcCCcCCHHHHHHhhcccceEEEEECCCCCCCc
Confidence 874 4567899999999999999885 5566789999888763 678888888888999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHH
Q 016612 155 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (386)
Q Consensus 155 ~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~ 223 (386)
+++ +++|.++|+++|++||+||+|....+. ... ..+.++++.|+||.+ |.+|+|+||++++ +.+.+.
T Consensus 195 v~s~e~l~~l~~la~~~~~~iI~DEaY~~~~~~~~~~s~~~~~~~~~~~I~i~SfSK~~-g~~GlRiG~ii~~-~~l~~~ 272 (410)
T PRK06290 195 VATKEFYEEVVDFAKENNIIVVQDAAYAALTFDGKPLSFLSVPGAKEVGVEIHSLSKAY-NMTGWRLAFVVGN-ELIVKA 272 (410)
T ss_pred CCCHHHHHHHHHHHHHcCeEEEEecchhhceeCCCCcChhcCCCccccEEEEeechhhc-CCchhheEeEEeC-HHHHHH
Confidence 997 678888999999999999998743221 111 124579999999999 5578999999986 556555
Q ss_pred HHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc
Q 016612 224 LYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 300 (386)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 300 (386)
+.........+.+...+.++...++. .....+.+.++.+.+.+.|++.. +. ++ ...++
T Consensus 273 l~~~~~~~~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~------~~----~p~g~ 333 (410)
T PRK06290 273 FATVKDNNDSGQFIAIQKAGIYALDHPEITEKIREKYSRRLDKLVKILNEVG---------FK------AE----MPGGT 333 (410)
T ss_pred HHHHHhccccCCcHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHHHHhCC---------Ce------ec----CCCee
Confidence 55554443344444444444444432 22334444555555666665431 11 11 11334
Q ss_pred eE-EEEeCCH-------HhHHHHHhhcCcce-eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----
Q 016612 301 VL-SFLTGSL-------ALSKHVVETTKYFS-ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----- 366 (386)
Q Consensus 301 ~~-~~~~~~~-------~~~~~l~~~l~~~g-i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----- 366 (386)
++ ++.+++. ....++.+.+...+ +...+|.. ..+++||+++
T Consensus 334 f~l~v~lp~~~~~~~~~~~~~~~~~~Ll~~~~v~~~p~~~-------------------------~~~~lRi~~~~~~~~ 388 (410)
T PRK06290 334 FYLYVKAPKGTKSGIKFENAEEFSQYLIKEKLISTVPWDD-------------------------AGHFLRFSVTFEAKD 388 (410)
T ss_pred eEEEEECCCccccCCCCCCHHHHHHHHHHhCCEEEECCcc-------------------------ccCeEEEEEEccccc
Confidence 44 4566432 13455666665543 33333321 1357999995
Q ss_pred cCChHHHHHHHHHHHhcCC
Q 016612 367 IEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 367 ~~~~~~~i~~l~~~l~~~~ 385 (386)
.++++++++.|.+.|..+.
T Consensus 389 ~~~~~~~~~~l~~~~~~~~ 407 (410)
T PRK06290 389 EEEEDRILEEIKRRLSDVE 407 (410)
T ss_pred ccchhHHHHHHHHHHhhcc
Confidence 5999999999999997653
No 56
>PRK07681 aspartate aminotransferase; Provisional
Probab=99.97 E-value=4.6e-28 Score=228.52 Aligned_cols=288 Identities=14% Similarity=0.145 Sum_probs=193.3
Q ss_pred ccccCCCCc-hHHHHHHHHHhhcCC----CceEEeCcHH-HHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 47 YDYTRSGNP-TRDALESLLAKLDKA----DRALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 47 ~~y~~~g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt-~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
+.|...|.+ +++++.+++.+.+|. ++.|++++|+ +++.. +.+++++||.|++++|+|+.+. ..++..|+
T Consensus 64 ~~y~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~~~~~Gd~Vlv~~P~y~~~~----~~~~~~G~ 139 (399)
T PRK07681 64 YGYTLSGIQEFHEAVTEYYNNTHNVILNADKEVLLLMGSQDGLVHLPMVYANPGDIILVPDPGYTAYE----TGIQMAGA 139 (399)
T ss_pred CCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEECCCCccchH----HHHHhcCC
Confidence 445544775 788888888876553 2456666665 88874 5567899999999999999885 55668899
Q ss_pred EEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----
Q 016612 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----- 184 (386)
Q Consensus 120 ~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----- 184 (386)
+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|.++|+++|++||+||+|+...+.
T Consensus 140 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~P~NPTG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~~~ 219 (399)
T PRK07681 140 TSYYMPLKKENDFLPDLELIPEEIADKAKMMILNFPGNPVPAMAHEDFFKEVIAFAKKHNIIVVHDFAYAEFYFDGNKPI 219 (399)
T ss_pred EEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCcCcCCCHHHHHHHHHHHHHcCeEEEEeccchhheeCCCCCC
Confidence 99888753 678888888788999999999999999997 788999999999999999998732211
Q ss_pred CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHH
Q 016612 185 RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEK 256 (386)
Q Consensus 185 ~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 256 (386)
... ..+.++++.|+||.+ |.+|+|+||++++ +.+.+.+...........+...+.++...+.. +....+.
T Consensus 220 ~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~~i~~-~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~ 297 (399)
T PRK07681 220 SFLSVPGAKEVGVEINSLSKSY-SLAGSRIGYMIGN-EEIVRALTQFKSNTDYGVFLPIQKAACAALRNGAAFCEKNRGI 297 (399)
T ss_pred ChhhCCCCcccEEEEeeccccc-CCccceeEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHHHH
Confidence 111 124579999999999 5668999999986 55666665555444445555555555544432 2222333
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc-ceeccCCCCccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLI 335 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~~~~G~~~~~~ 335 (386)
+.++.+.+.+.|++.. + .+. . +..+.++++.+++.....++.+.+.. .|+.+.+|..+.
T Consensus 298 ~~~~~~~l~~~L~~~g---------~------~~~--~-p~~g~f~~~~l~~~~~~~~~~~~l~~~~gv~v~pg~~f~-- 357 (399)
T PRK07681 298 YQERRDTLVDGFRTFG---------W------NVD--K-PAGSMFVWAEIPKGWTSLSFAYALMDRANVVVTPGHAFG-- 357 (399)
T ss_pred HHHHHHHHHHHHHHCC---------C------ccc--C-CCeeeEEEEECCCCCCHHHHHHHHHHhCCEEEeCChhhC--
Confidence 4444455555555421 1 110 1 12356677777543334556666544 688777775421
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHH
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDK 379 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~ 379 (386)
...++++|||++. +++++.+++|++
T Consensus 358 -------------------~~~~~~iRis~~~~~~~~~~~l~~l~~ 384 (399)
T PRK07681 358 -------------------PHGEGFVRIALVQDEEVLQQAVENIRN 384 (399)
T ss_pred -------------------cCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 0125789999974 455555555554
No 57
>PRK06108 aspartate aminotransferase; Provisional
Probab=99.97 E-value=3.9e-28 Score=228.22 Aligned_cols=293 Identities=22% Similarity=0.260 Sum_probs=192.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcC--C--CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDK--A--DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g--~--~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.+ +++++.+++++.+| . ++.++++++++++.. +..++++||.|++++|.|+.+. ..++..|
T Consensus 54 ~~~Y~~~~G~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g 129 (382)
T PRK06108 54 ETFYTHNLGIPELREALARYVSRLHGVATPPERIAVTSSGVQALMLAAQALVGPGDEVVAVTPLWPNLV----AAPKILG 129 (382)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCcCcceEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCccchH----HHHHHCC
Confidence 3458876 876 89999999988877 3 245555556688874 4557899999999999998875 4556788
Q ss_pred cEEEEeCCC--------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 119 VVVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 119 ~~~~~v~~~--------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
++++.++.+ |++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+||+|+...+.
T Consensus 130 ~~~~~v~~~~~~~~~~~d~~~l~~~~~~~~~~i~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~~ 209 (382)
T PRK06108 130 ARVVCVPLDFGGGGWTLDLDRLLAAITPRTRALFINSPNNPTGWTASRDDLRAILAHCRRHGLWIVADEVYERLYYAPGG 209 (382)
T ss_pred CEEEEeeCCCCCCCccCCHHHHHHhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEehhhhhhccCCCC
Confidence 998888753 678999988888999999999999999985 788999999999999999998643321
Q ss_pred ---C---CCC-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHH
Q 016612 185 ---R---PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALR 253 (386)
Q Consensus 185 ---~---~~~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 253 (386)
. ... .+.++++.|+||.+ |.+|+|+||+++++ ++.+.+.........+.+...+.++...+.. +...
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~ 287 (382)
T PRK06108 210 RAPSFLDIAEPDDRIIFVNSFSKNW-AMTGWRLGWLVAPP-ALGQVLEKLIEYNTSCVAQFVQRAAVAALDEGEDFVAEL 287 (382)
T ss_pred CCCCHhhcCCCcCCEEEEeechhhc-cCcccceeeeeCCH-HHHHHHHHHHHhcccCCChHHHHHHHHHHhCChHHHHHH
Confidence 0 111 24579999999998 55689999999874 4555554444333344555555444444332 1222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhc-CcceeccCCCCcc
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVK 332 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~~~~G~~~ 332 (386)
.++..++.+.+.+.|++. +++.+. .+. .+.++++.+++......+.+.+ ...|+.+.+|..+
T Consensus 288 ~~~~~~~~~~l~~~L~~~--------------~~~~~~--~p~-~g~~~~~~l~~~~~~~~~~~~ll~~~gV~v~pg~~f 350 (382)
T PRK06108 288 VARLRRSRDHLVDALRAL--------------PGVEVA--KPD-GAMYAFFRIPGVTDSLALAKRLVDEAGLGLAPGTAF 350 (382)
T ss_pred HHHHHHHHHHHHHHHHhC--------------CCCccc--CCC-eeEEEEEeCCCCCCHHHHHHHHHHhCCEEEeCchhh
Confidence 233333333444444332 122221 111 1344566675433345565554 4567877776642
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
. ...++++|+|++. +++++.++.|+++++
T Consensus 351 ~---------------------~~~~~~~Ris~~~~~~~l~~~l~~l~~~l~ 381 (382)
T PRK06108 351 G---------------------PGGEGFLRWCFARDPARLDEAVERLRRFLA 381 (382)
T ss_pred C---------------------CCCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 1 0125789999987 445555666666554
No 58
>PLN00143 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.97 E-value=4.8e-28 Score=228.62 Aligned_cols=328 Identities=15% Similarity=0.098 Sum_probs=202.0
Q ss_pred cceeeccCCC-CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC--C-ceEEeCcH-HHH
Q 016612 10 STLLMNFSNE-FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA--D-RALCFTSG-MAA 82 (386)
Q Consensus 10 ~~~~~~~~~~-~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~~i~~~~g-t~a 82 (386)
...+++++.+ ++.|+...+|.....+... .+.......|++. |.+ +|+++.+++.+.+|. + +.|++++| +++
T Consensus 31 ~~~~i~l~~G~p~~~~~~~~p~~~~~a~~~-~~~~~~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~I~it~G~~~a 109 (409)
T PLN00143 31 HRLAISFGFGDPSCFECFRTTNIAEDAIVE-AVRSAKFNSYAPTGGILPARRAIADYLSNDLPYQLSPDDVYLTLGCKHA 109 (409)
T ss_pred CCceeeCCCCCCCCCCCCCCCHHHHHHHHH-HHhCcCCCCCCCCCCCHHHHHHHHHHHHhhcCCCCCHhhEEEecChHHH
Confidence 3456666644 3334444444322111111 1112334568776 876 788898888876543 2 44555555 588
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCcc
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~ 154 (386)
+. ++.+++++||.|++++|+|+.+. ..++..|.+++.++.. |+++++++++++++++++++||||||.
T Consensus 110 l~~~~~~l~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~~nP~NPTG~ 185 (409)
T PLN00143 110 AEIIIKVLARPEANILLPRPGFPDVE----TYAIFHHLEIRHFDLLPEKGWEVDLDAVEAIADENTIAMVIINPGNPCGS 185 (409)
T ss_pred HHHHHHHHcCCCCEEEEcCCCCcCHH----HHHHHcCCEEEEEeccCCCCCcCCHHHHHHhcccCCEEEEEECCCCCCCC
Confidence 87 45567899999999999999885 4556778888887642 789999988888999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----CC----CCCCccEEEeccccccccCCCceEEEEEEc-ChhHHH
Q 016612 155 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RP----LELGADIVMHSATKFIAGHSDVMAGVLAVK-GERLAK 222 (386)
Q Consensus 155 ~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~~----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~-~~~~~~ 222 (386)
+++ +++|.++|++++++||+||+|..-.+. .+ ......+++.|+||.| +.+|+|+||++++ ++.+.+
T Consensus 186 ~~s~~~~~~l~~~a~~~~~~ii~De~Y~~l~~~~~~~~~~~~~~~~~~vi~~~SfSK~f-~~pGlRvG~~v~~~p~~~~~ 264 (409)
T PLN00143 186 VYSYEHLNKIAETARKLGILVIADEVYGHIVFGSKPFVPMGLFASIVPVITLGSISKRW-MIPGWGLGWLVTCDPSGLLQ 264 (409)
T ss_pred ccCHHHHHHHHHHHHHcCCeEEEEccccccccCCCCCcchhhhcccCcEEEEccchhhc-CCCccceEEEEeeCchhhhh
Confidence 987 778899999999999999998642221 11 1123579999999998 4568999999984 333322
Q ss_pred ------HHHHhhhhcCCCCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhh
Q 016612 223 ------ELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 291 (386)
Q Consensus 223 ------~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~ 291 (386)
.+...... ....+...+.++...+. .+....+...++.+.+.+.+++.+ +.. .
T Consensus 265 ~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~--------------~~~-~ 328 (409)
T PLN00143 265 ICEIADSIKKALNP-APFPPTFIQAAIPEILEKTTEDFFSKTINILRAALAFCYDKLKEIP--------------CIM-C 328 (409)
T ss_pred hHHHHHHHHHHHhc-cCCCCchHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CCC-C
Confidence 12222211 11223344444443332 122223333334443444443321 100 0
Q ss_pred hhccCCCCceEEEEeCCH-----HhHHHHH-hhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe
Q 016612 292 YSQAKGAGSVLSFLTGSL-----ALSKHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 365 (386)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~-----~~~~~l~-~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 365 (386)
...+ ..+.++|+.++.. ....+++ +.+...|+.+.+|..+. .++++||++
T Consensus 329 ~~~p-~gg~f~w~~l~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~f~-----------------------~~~~iRi~~ 384 (409)
T PLN00143 329 PQKA-EGAFFALVKLNLLLLEDIEDDMEFCLKLAKEESLIILPGVTVG-----------------------LKNWLRITF 384 (409)
T ss_pred CCCC-CeeEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEeCccccC-----------------------CCCeEEEEE
Confidence 0111 1356777777421 1233333 44466788888876521 256899999
Q ss_pred cc--CChHHHHHHHHHHHhc
Q 016612 366 GI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 366 ~~--~~~~~~i~~l~~~l~~ 383 (386)
+. +.+++.+++|++++++
T Consensus 385 ~~~~~~l~~al~rl~~~l~~ 404 (409)
T PLN00143 385 AVEQSSLEDGLGRLKSFCGR 404 (409)
T ss_pred cCCHHHHHHHHHHHHHHHHH
Confidence 84 6677778888877754
No 59
>PRK05942 aspartate aminotransferase; Provisional
Probab=99.97 E-value=2e-28 Score=230.62 Aligned_cols=289 Identities=15% Similarity=0.118 Sum_probs=189.1
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +++++.+++.+.+|. ++.+++++| ++++. ++.+++++||+|++++|+|+.+.. .+...
T Consensus 66 ~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~i~vt~G~~~al~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~~ 141 (394)
T PRK05942 66 NHGYPPFEGTASFRQAITDWYHRRYGVELDPDSEALPLLGSKEGLTHLALAYVNPGDVVLVPSPAYPAHFR----GPLIA 141 (394)
T ss_pred CccCCCCCCCHHHHHHHHHHHHHHHCCCcCCCCeEEEccChHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHHc
Confidence 4678876 876 899999998877663 234655555 58887 455688999999999999998853 34567
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
|.+++.++.+ |++++++.+.++++++++++|+||||.+.+ +++|.++|+++|+++|+||+|....+.
T Consensus 142 g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~P~NPtG~~~s~~~~~~i~~~a~~~~~~iI~De~y~~~~~~~~~ 221 (394)
T PRK05942 142 GAQIYPIILKPENDWLIDLSSIPEEVAQQAKILYFNYPSNPTTATAPREFFEEIVAFARKYEIMLVHDLCYAELAFDGYQ 221 (394)
T ss_pred CCEEEEeecCCccCCccCHHHHHHhccccceEEEEcCCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCC
Confidence 8888887652 688998888889999999999999999997 788999999999999999998632211
Q ss_pred --C---CCC-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH----HH
Q 016612 185 --R---PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL----RV 254 (386)
Q Consensus 185 --~---~~~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~ 254 (386)
. ... .+.++++.|+||.+ |.+|+|+||++++ +++.+.+.........+.+...+.++...++.... ..
T Consensus 222 ~~~~~~~~~~~~~~i~~~SfSK~~-~~~GlRiG~i~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 299 (394)
T PRK05942 222 PTSLLEIPGAKDIGVEFHTLSKTY-NMAGWRVGFVVGN-RHIIQGLRTLKTNLDYGIFSALQKAAETALQLPDSYLQQVQ 299 (394)
T ss_pred CCChhhCCCccccEEEEecchhcc-CChhhheeeeecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCcHHHHHHHH
Confidence 1 111 23468899999998 5578999999986 55666666555433334454555544444432221 22
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCHHhHHHHHh-hcCcceeccCCCCcc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVE-TTKYFSITVSFGSVK 332 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~l~~-~l~~~gi~~~~G~~~ 332 (386)
+.+.++.+.+.+.+++.. + .+. ...++ ++++.++......++.. .+...|+.+.+|..+
T Consensus 300 ~~~~~~~~~~~~~L~~~~---------~------~~~----~~~~~~f~~~~~~~~~~~~~~~~~~l~~~gV~v~~g~~f 360 (394)
T PRK05942 300 ERYRTRRDFLIQGLGELG---------W------NIP----PTKATMYLWVPCPVGMGSTDFALNVLQKTGVVVTPGNAF 360 (394)
T ss_pred HHHHHHHHHHHHHHHHCC---------C------eec----CCCeeeEEEEECCCCCCHHHHHHHHHHHCCEEEeCChhh
Confidence 223333333444443321 1 111 12344 66777754222333333 344567777666542
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
. ...++++||+++ .+.+.+.+.+++..
T Consensus 361 ~---------------------~~~~~~iRis~~-~~~~~l~~~l~~l~ 387 (394)
T PRK05942 361 G---------------------EGGEGYVRISLI-ADCDRLGEALDRLK 387 (394)
T ss_pred C---------------------cCCCCeEEEEec-CCHHHHHHHHHHHH
Confidence 1 012578999998 45667766665543
No 60
>PLN00175 aminotransferase family protein; Provisional
Probab=99.97 E-value=4.2e-28 Score=228.99 Aligned_cols=296 Identities=17% Similarity=0.191 Sum_probs=199.6
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
+...|++. |.+ +++++.+++.+.+|.+ +.|++++| ++++. ++.++++|||+|++++|.|+.+. ..++.
T Consensus 83 ~~~~Y~~~~G~~~Lr~aia~~~~~~~g~~~~~~~~I~vt~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~ 158 (413)
T PLN00175 83 GKNQYARGFGVPELNSAIAERFKKDTGLVVDPEKEVTVTSGCTEAIAATILGLINPGDEVILFAPFYDSYE----ATLSM 158 (413)
T ss_pred CCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCHHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHH
Confidence 34678887 887 8999999988876642 24555555 58887 55668899999999999998885 45567
Q ss_pred CCcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 117 TGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 117 ~g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
.|.+++.++.+ |++++++.+.+++++|++++|+||||.+++ +++|.++|++++++||+||+|....+.
T Consensus 159 ~g~~~~~v~~~~~~~~~~~~~l~~~~~~~~k~i~i~~p~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~l~~~~~~ 238 (413)
T PLN00175 159 AGAKIKTVTLRPPDFAVPEDELKAAFTSKTRAILINTPHNPTGKMFTREELELIASLCKENDVLAFTDEVYDKLAFEGDH 238 (413)
T ss_pred cCCEEEEEECCcccCCCCHHHHHHhcCcCceEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEecccCccccCCcc
Confidence 88888888753 688999999889999999999999999985 778999999999999999998643221
Q ss_pred -CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHH
Q 016612 185 -RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVE 255 (386)
Q Consensus 185 -~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 255 (386)
... ..+..+++.|+||.+ +.+|+|+||+++++ .+.+.+...........+...+.++...+.. +....+
T Consensus 239 ~s~~~~~~~~~~vi~i~SfSK~~-~~~G~RiG~~v~~~-~l~~~l~~~~~~~~~~~s~~~Q~a~~~~l~~~~~~~~~~~~ 316 (413)
T PLN00175 239 ISMASLPGMYERTVTMNSLGKTF-SLTGWKIGWAIAPP-HLTWGVRQAHSFLTFATATPMQWAAVAALRAPESYYEELKR 316 (413)
T ss_pred cChhhCCCCcCcEEEEecchhhc-cCcchheeeeEeCH-HHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCHHHHHHHHH
Confidence 111 125679999999999 55689999999874 4655555555444455566666666555532 233344
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--CHHhHHHHHhhc-CcceeccCCCCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--SLALSKHVVETT-KYFSITVSFGSVK 332 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~l~~~l-~~~gi~~~~G~~~ 332 (386)
.+.++.+.+.+.|++.. + .+. .+. .+.++++.+. +.....++.+.+ ...|+.+.+|..+
T Consensus 317 ~~~~~~~~l~~~L~~~g---------~------~~~--~p~-g~~f~~~~~~~~~~~~~~~~~~~ll~~~gV~v~pg~~F 378 (413)
T PLN00175 317 DYSAKKDILVEGLKEVG---------F------KVY--PSS-GTYFVMVDHTPFGFENDIAFCEYLIEEVGVAAIPPSVF 378 (413)
T ss_pred HHHHHHHHHHHHHHHCC---------C------eec--CCC-eeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 45555555656655431 1 111 111 2344566553 211244555555 3457777776542
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
..- + +..+++|||+++. +++++.+++|.+.++
T Consensus 379 ~~~--~----------------~~~~~~iRls~~~~~e~l~~~~~rL~~~~~ 412 (413)
T PLN00175 379 YLN--P----------------EDGKNLVRFAFCKDEETLRAAVERMKTKLK 412 (413)
T ss_pred CCC--C----------------CCCCCEEEEEEcCCHHHHHHHHHHHHHHHh
Confidence 100 0 0125689999974 666777777777665
No 61
>PLN00145 tyrosine/nicotianamine aminotransferase; Provisional
Probab=99.97 E-value=6.5e-28 Score=228.57 Aligned_cols=201 Identities=17% Similarity=0.179 Sum_probs=144.4
Q ss_pred cceeeccCCCCCC-CCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHH
Q 016612 10 STLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAA 82 (386)
Q Consensus 10 ~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~a 82 (386)
...+++++.++.. ++...+|........ ..+.......|++. |.+ +|+++.+++.+.+|. ++++++++++++
T Consensus 51 ~~~~i~l~~G~P~~~~~~~~~~~~~~a~~-~al~~~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~v~it~G~~~a 129 (430)
T PLN00145 51 PRPVLPLGHGDPSAFPCFRTAPEAEDAVA-AALRSGKYNSYSTCVGLLPARRAIAEYLSRDLPYELSTDDIYLTAGCAQA 129 (430)
T ss_pred CCCeeeCCCCCCCCCCCCCCCHHHHHHHH-HHHHcCcCCCCCCCccCHHHHHHHHHHHhhccCCCCChhhEEEeCCHHHH
Confidence 3457788866443 454444422111111 11222234578876 776 788888888765543 356666666799
Q ss_pred HHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCcc
Q 016612 83 LAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 83 l~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~ 154 (386)
+..+ ..++++||+|++++|.|+.+. ..+...|.+++.++. .|++++++.++++++++++++|+||||.
T Consensus 130 l~l~~~~l~~~Gd~Vlv~~P~y~~y~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~P~NPtG~ 205 (430)
T PLN00145 130 IEIIMSVLAQPGANILLPRPGYPLYE----ARAVFSGLEVRHFDLLPERGWEVDLEGVEALADENTVAMVIINPNNPCGS 205 (430)
T ss_pred HHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcCCEEEEeeCCcccCCcCCHHHHHHHhCcCceEEEEeCCCCCCCC
Confidence 9754 557799999999999999885 345567788887764 2889999999999999999999999999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC----C----CCCCccEEEeccccccccCCCceEEEEEEc
Q 016612 155 ICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P----LELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 155 ~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~----~----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~ 216 (386)
+++ +++|.++|+++|++||+||+|....+.. + ......+++.|+||.+ +.+|+|+||+++.
T Consensus 206 v~~~~~l~~i~~~a~~~~i~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~pG~RlG~iv~~ 277 (430)
T PLN00145 206 VYSYEHLAKIAETARKLGILVIADEVYDHLTFGSKPFVPMGVFGEVAPVLTLGSISKRW-VVPGWRLGWIATC 277 (430)
T ss_pred CCCHHHHHHHHHHHHHcCCEEEEeccchhhccCCCCccchhhhcccCcEEEEecccccc-CCCCeeEEEEEEe
Confidence 997 7889999999999999999986432210 1 1124679999999998 4568999999984
No 62
>TIGR03540 DapC_direct LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known aminotransferases, succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh). Although there is no experimental characterization of any of the sequences in this clade, a direct pathway is known in plants and Chlamydia, so it seems quite reasonable that these enzymes catalyze the same transformation.
Probab=99.97 E-value=3.2e-28 Score=228.62 Aligned_cols=286 Identities=16% Similarity=0.126 Sum_probs=190.9
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHH-HHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt-~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|++. |.+ +|+++.+++.+.+|. ++.+++++|+ +++.. +..++++||.|++++|+|+.+. ..++..
T Consensus 60 ~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~vi~t~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~ 135 (383)
T TIGR03540 60 NHRYPSYEGMLAYRQAVADWYKRRFGVELDPETEVLSLIGSKEGIAHIPLAFVNPGDIVLVPDPGYPVYR----IGTLFA 135 (383)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCeEEECCCcHHHHHHHHHHhCCCCCEEEEeCCCCcchH----HHHHhc
Confidence 4568877 775 899999998877665 2356666664 88875 4557899999999999999885 456678
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc----
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---- 183 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~---- 183 (386)
|.+++.++.+ |++++++.+.++++++++++|+||||.+.+ +++|+++|+++|++||+||+|....+
T Consensus 136 G~~v~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~i~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~l~~~~~~ 215 (383)
T TIGR03540 136 GGEPYEMPLKEENGFLPDFDAIPEDIAKKAKLMFINYPNNPTGAVAPLKFFKELVEFAKEYNIIVCHDNAYSEITFDGYK 215 (383)
T ss_pred CCEEEEEecCcccCCccCHHHHHhhccccceEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCEEEEEecchhhhccCCCC
Confidence 8888888753 678888888889999999999999999997 78899999999999999999863221
Q ss_pred -cCC--C--CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHH
Q 016612 184 -SRP--L--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRV 254 (386)
Q Consensus 184 -~~~--~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 254 (386)
... . ..+.++++.|+||.+ |.+|+|+||++++ +++.+.+.........+.+...+.++...+.. +....
T Consensus 216 ~~~~~~~~~~~~~~i~~~SfSK~~-g~~GlRiG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 293 (383)
T TIGR03540 216 APSFLEVDGAKDVGIEFHSLSKTY-NMTGWRIGMAVGN-ADLIAGLGKVKTNVDSGVFQAIQYAAIAALNGPQDVVKEIR 293 (383)
T ss_pred CcCcccCCCcccCEEEEEeccccc-CCccceeeEEeCC-HHHHHHHHHHHHhcccCCChHHHHHHHHHHhCCHHHHHHHH
Confidence 111 1 123568899999999 5678999999986 55655555544433334444444444443332 22223
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhc-CcceeccCCCCccc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKS 333 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~~~~G~~~~ 333 (386)
..+.++.+.+.+.|++.. ..++ .+. .+.++++.+++......+.+.+ ...|+.+.+|..+.
T Consensus 294 ~~~~~~~~~~~~~L~~~~---------------~~~~--~~~-~~~~~~~~l~~~~~~~~~~~~ll~~~gi~v~~g~~f~ 355 (383)
T TIGR03540 294 KIYQRRRDLLLEALKKIG---------------IDVE--KPK-ATFYVWVPVPEGYTSAEFAARLLEETGVVVTPGVGFG 355 (383)
T ss_pred HHHHHHHHHHHHHHHhCC---------------CEec--CCC-cceEEEEECCCCCCHHHHHHHHHHHCCEEEecchhhC
Confidence 344455555555555431 1111 111 2455677775433355666664 45688877776532
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 377 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 377 (386)
. ..++++|||++. +.+++.+.+
T Consensus 356 ~---------------------~~~~~~Ris~~~-~~~~l~~~l 377 (383)
T TIGR03540 356 E---------------------YGEGYIRISLTV-PDERLEEAV 377 (383)
T ss_pred c---------------------cCCCeEEEEecC-CHHHHHHHH
Confidence 0 125689999984 334444443
No 63
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=99.97 E-value=3.9e-29 Score=237.58 Aligned_cols=303 Identities=19% Similarity=0.205 Sum_probs=206.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHHHHH-hcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGM-AALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~~~~-~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
..+|... |.+ +|+++.+++....|.. +.|++|+|+ +|+.++.. +++|||.|++++|+|.+.. .+++..|
T Consensus 125 ~~~y~~~~G~~~LR~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~----~~~~~~g 200 (459)
T COG1167 125 ALQYGPTAGLPELREAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGAL----QALEALG 200 (459)
T ss_pred hhcCCCCCCcHHHHHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHH----HHHHHcC
Confidence 5678885 876 8999999998555543 467777776 88986544 7889999999999998875 6677899
Q ss_pred cEEEEeCCC----CHHHHHhhhCC-CceEEEEe-CCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----
Q 016612 119 VVVKRVNTC----DLDEVASAIGP-WTKLVWVE-SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----- 184 (386)
Q Consensus 119 ~~~~~v~~~----d~~~l~~~~~~-~~~~v~~~-~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----- 184 (386)
++++.++++ |+++|++.+.. ++|+++++ +.+||||..++ .++|.++|++||++||+||.|+.-.+.
T Consensus 201 ~~~~~vp~d~~G~~~e~le~~~~~~~~k~~y~~P~~qNPtG~tms~~rR~~Ll~lA~~~~~~IIEDD~y~el~~~~~p~~ 280 (459)
T COG1167 201 ARVIPVPVDEDGIDPEALEEALAQWKPKAVYVTPTFQNPTGVTMSLERRKALLALAEKYDVLIIEDDYYGELRYDGPPPP 280 (459)
T ss_pred CcEEecCCCCCCCCHHHHHHHHhhcCCcEEEECCCCCCCCCCccCHHHHHHHHHHHHHcCCeEEeeCcchhhhcCCCCCC
Confidence 999999986 89999999874 78888886 88999999987 578999999999999999998732211
Q ss_pred ---CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHH
Q 016612 185 ---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNA 261 (386)
Q Consensus 185 ---~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (386)
.....+.+++++||||.++ +|+|+||++++ +.+.+.+...........+...+.++..-+. .....++.
T Consensus 281 ~l~~ld~~~rViy~gSFSK~l~--PglRlG~vv~p-~~~~~~~~~~k~~~~~~~s~~~Q~~la~~l~-----~G~~~~hl 352 (459)
T COG1167 281 PLKALDAPGRVIYLGSFSKTLA--PGLRLGYVVAP-PELIEKLLRLKQAADLGPSSLSQAALAAFLL-----SGHYDRHL 352 (459)
T ss_pred ChHhhCCCCCEEEEeeehhhcc--cccceeeeeCC-HHHHHHHHHHHHHhcCCCChHHHHHHHHHHH-----cCCHHHHH
Confidence 1122478899999999994 37999999997 4566666666666666666666544433211 01123333
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCC-CCcccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF-GSVKSLISMPCF 340 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~-G~~~~~~~~p~~ 340 (386)
+++++.+++++ ..+...|..+.+..+.+..+. .|.++|+.++.......+.+.+...|+.+.+ |..+..-
T Consensus 353 ~~lR~~y~~rr---~~l~~~L~~~~~~~~~~~~p~-gG~flwl~l~~~~~~~~l~~~a~~~gv~i~~~g~~f~~~----- 423 (459)
T COG1167 353 RRLRREYARRR---DALLEALAEYLPELATWTRPE-GGLFLWLELPEGIDARELLAAALEKGVVVTPLGSAFSAD----- 423 (459)
T ss_pred HHHHHHHHHHH---HHHHHHHHHhCCCCeeeecCC-ceEEEEEEcCCCCCHHHHHHHHHHCCCEEEcCCccccCC-----
Confidence 33333333322 111122222211111112222 2677888887776688888888888888766 6553211
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
+...+++|+|++. +++++.++.|.++++.
T Consensus 424 --------------~~~~~~~Rl~~s~~~~e~i~~gi~~l~~~~~~ 455 (459)
T COG1167 424 --------------GDPRNGLRLSFSSPSEEEIEEGIKRLAALLRE 455 (459)
T ss_pred --------------CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 1124579999986 5555556666666654
No 64
>PRK07366 succinyldiaminopimelate transaminase; Validated
Probab=99.96 E-value=5.3e-28 Score=227.46 Aligned_cols=288 Identities=14% Similarity=0.091 Sum_probs=184.7
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC--C-c-eEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA--D-R-ALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~-~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +|+++.+++.+.+|. + + .|++++|+ +++..+ ..++++||.|++++|+|+.+. ..++..
T Consensus 61 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~Gs~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~~ 136 (388)
T PRK07366 61 THGYLLFHGTLDFREAAAQWYEQRFGLAVDPETEVLPLIGSQEGTAHLPLAVLNPGDFALLLDPGYPSHA----GGVYLA 136 (388)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHhhCCcCCCcCeEEECCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHhc
Confidence 4567776 776 888888888876663 2 3 57777665 888754 557899999999999999885 556678
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc----
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---- 183 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~---- 183 (386)
|.+++.++.+ |++++++.+.++++++++++||||||.+++ +++|.++|+++|++||+||+|..-.+
T Consensus 137 g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (388)
T PRK07366 137 GGQIYPMPLRAENDFLPVFADIPTEVLAQARLMVLSYPHNPTTAIAPLSFFQEAVAFCQQHDLVLVHDFPYVDLVFDGEV 216 (388)
T ss_pred CCEEEEEECCCccCCCCCHHHHHHhhcccceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEecchhhcccCCCC
Confidence 9998888763 566777777778999999999999999986 67788899999999999999863221
Q ss_pred --cCCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCC-ChhhHHHHHhcCC----cHHH
Q 016612 184 --SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL-APFDCWICLRGVK----TMAL 252 (386)
Q Consensus 184 --~~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~~~~ 252 (386)
..... ....++++||||.+ |.+|+|+||++++ +++.+.+.........+. +.....+ ...+. .+..
T Consensus 217 ~~~~~~~~~~~~~~vi~~~SfSK~~-g~~GlRiG~~v~~-~~li~~l~~~~~~~~~~~~~~~~~~a-~~~l~~~~~~l~~ 293 (388)
T PRK07366 217 EPPSILQADPEKSVSIEFFTLSKSY-NMGGFRIGFAIGN-AQLIQALRQVKAVVDFNQYRGILNGA-IAALTGPQATVQQ 293 (388)
T ss_pred CCCChhhCCCCcccEEEEeeccccc-CCcchhheehcCC-HHHHHHHHHHHhhcccCCCHHHHHHH-HHHHhCcHHHHHH
Confidence 11111 12458899999999 5568999999986 556665655544333322 2222222 22221 1222
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhc-CcceeccCCC
Q 016612 253 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETT-KYFSITVSFG 329 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l-~~~gi~~~~G 329 (386)
..+.+.++.+.+.+.+++.. +. + .. +..|.++++.+++. ....++.+.+ ...|+.+.+|
T Consensus 294 ~~~~~~~~r~~l~~~L~~~~---------~~------~--~~-p~~g~f~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg 355 (388)
T PRK07366 294 TVQIFRQRRDAFINALHQIG---------WP------V--PL-PEATMYVWAKLPEPWQGNSVEFCTQLVAQTGVAASPG 355 (388)
T ss_pred HHHHHHHHHHHHHHHHHHCC---------Cc------c--cC-CCeeEEEEEECCcccCCCHHHHHHHHHHhCCEEEeCc
Confidence 23333444444444444321 11 0 01 22366777777542 1234455444 5568877777
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHH
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDK 379 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~ 379 (386)
..+. +..++++||+++. +.+++.+++|.+
T Consensus 356 ~~f~---------------------~~~~~~iRi~~~~~~~~l~~~l~rl~~ 386 (388)
T PRK07366 356 SGFG---------------------KSGEGYVRFALVHDPDILEEAVERIAA 386 (388)
T ss_pred hHhC---------------------cCCCCeEEEEecCCHHHHHHHHHHHHH
Confidence 6421 0125789999974 344444554443
No 65
>TIGR03537 DapC succinyldiaminopimelate transaminase. Note: the detailed information included in the EC:2.6.1.17 record includes the assertions that the enzyme uses the pyridoxal pyrophosphate cofactor, which is consistent with the pfam00155 family, and the assertion that the amino group donor is L-glutamate, which is undetermined for the sequences in this clade.
Probab=99.96 E-value=1.8e-27 Score=220.70 Aligned_cols=262 Identities=20% Similarity=0.185 Sum_probs=180.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC--C-c-eEEeCcHH-HHHH-HHHHhcCCC---CEEEecCCCCCcHHHHHhhhc
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA--D-R-ALCFTSGM-AALA-AVTHLLGTG---EEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~-~i~~~~gt-~al~-~~~~~~~~g---~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
...|... |.+ +++++.+++.+.+|. + + .|++++|+ +++. ++..++++| |.|+++.|+|+.+. ..+
T Consensus 29 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~Iiit~Gs~~ai~~~~~~~~~~g~~~d~Vl~~~p~y~~~~----~~~ 104 (350)
T TIGR03537 29 VSQYPSALGTKALREAISGWFERRFGVKLDPDAQVLPSAGSKEAIFHFPLVFIDPEEDRRRVIFGTPGYPVYE----RGA 104 (350)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHHcCCCCCCceEEEcCCCCcchH----HHH
Confidence 4458776 775 899999999887663 2 3 67777776 8887 455578877 69999999999986 556
Q ss_pred ccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc
Q 016612 115 PKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS 184 (386)
Q Consensus 115 ~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~ 184 (386)
+..|.+++.++.+ |++++++++.++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+.....
T Consensus 105 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~ 184 (350)
T TIGR03537 105 LFAGGEPTAVKLKKEDGFLLRLEKVEKSILEETKIVWINYPHNPTGATAPRSYLKETIAMCREHGIILCSDECYTEIYFG 184 (350)
T ss_pred HhcCCEEEEcccCcccCCccCHHHHHHhhhhccEEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCcEEEEeccccccccC
Confidence 7889999988763 788999888889999999999999999997 889999999999999999998643221
Q ss_pred C----CC--CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC---cHHHHHH
Q 016612 185 R----PL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVE 255 (386)
Q Consensus 185 ~----~~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 255 (386)
. .. ..+.++++.|+||.+ |.+|+|+||++++ +.+.+.+.......+...+...+.++...+. ....+..
T Consensus 185 ~~~~~~~~~~~~~~i~~~s~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~r~ 262 (350)
T TIGR03537 185 EPPHSALEVGIENVLAFHSLSKRS-GMTGYRSGFVAGD-EKLISFLRKLRANFGVASPDFVQAAAKAAWSDDNHVLERRK 262 (350)
T ss_pred CCCCchhhcCcCCEEEEeeccccc-CCccccceeeecC-HHHHHHHHHHHHhhccCCCHHHHHHHHHHhCCcHHHHHHHH
Confidence 1 11 234579999999998 4568999999875 5566656555444444444334443333332 1223334
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSV 331 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~ 331 (386)
.+.++.+.+.+.+++.. + .+. . ...+.++++.+++......+.+.+...|+.+.+|..
T Consensus 263 ~l~~~~~~~~~~l~~~g---------~------~~~--~-~~g~~~~~~~~~~~~~~~~l~~~L~~~gv~v~~g~~ 320 (350)
T TIGR03537 263 IFKRKRDLFIEFFNKVG---------L------EYL--Y-PDATFYLWVKVPSGIDAKDYALRLLENGIVVAPGEN 320 (350)
T ss_pred HHHHHHHHHHHHHHHCC---------C------ccc--C-CCeEEEEEEECCCCCCHHHHHHHHHHCCEEEcCchh
Confidence 44445555555554321 1 111 1 112445677776543456777777778888887765
No 66
>PLN02656 tyrosine transaminase
Probab=99.96 E-value=1.5e-27 Score=225.41 Aligned_cols=329 Identities=13% Similarity=0.126 Sum_probs=203.2
Q ss_pred ccceeeccCCCCCC-CCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHH
Q 016612 9 VSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMA 81 (386)
Q Consensus 9 ~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~ 81 (386)
....+++++.++.. .+..++|.....++. ..+.......|++. |.+ +++++.+++.+.+|. +++++++++++
T Consensus 29 ~~~~~i~l~~G~p~~~~~~~~~~~~~~~~~-~~~~~~~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~ 107 (409)
T PLN02656 29 NGKRVISLGMGDPTAYSCFHTTHVAQEAVV-DALQSNKFNGYAPTVGLPQARRAIAEYLSRDLPYKLSLDDVFITSGCTQ 107 (409)
T ss_pred cCCeeeecCCCCCCcCCCCCCCHHHHHHHH-HHHhcCCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcccEEEeCChHH
Confidence 34567788855433 222332221111111 11122344678876 776 788888888776553 24555555569
Q ss_pred HHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCc
Q 016612 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQ 153 (386)
Q Consensus 82 al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG 153 (386)
++. ++.+++++||+|++++|.|+.+. ..++..|++++.++.. |++++++.++++++++++++|+||||
T Consensus 108 al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG 183 (409)
T PLN02656 108 AIDVALSMLARPGANILLPRPGFPIYE----LCAAFRHLEVRYVDLLPEKGWEVDLDAVEALADQNTVALVIINPGNPCG 183 (409)
T ss_pred HHHHHHHHHhCCCCeEEEeCCCCCcHH----HHHHHcCCEEEEEeCCCcCCCCCCHHHHHHHhccCceEEEEECCCCCCC
Confidence 987 45567899999999999998774 3445678888887752 78899988888899999999999999
Q ss_pred ccc---cHHHHHHHHHHcCCEEEEeCCCCCCCccC----C----CCCCccEEEeccccccccCCCceEEEEEEcC-----
Q 016612 154 QIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSR----P----LELGADIVMHSATKFIAGHSDVMAGVLAVKG----- 217 (386)
Q Consensus 154 ~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~~----~----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~----- 217 (386)
.++ ++++|+++|+++|++||+|++|....+.. + ......+++.||||.| +.+|+|+||+++++
T Consensus 184 ~~~s~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfSK~f-~~pGlRiG~~i~~~~~~~~ 262 (409)
T PLN02656 184 NVYSYQHLKKIAETAEKLKILVIADEVYGHLAFGSNPFVPMGVFGSIVPVLTLGSLSKRW-IVPGWRLGWFVTTDPSGSF 262 (409)
T ss_pred CCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCcccHHHhcccCcEEEEcccchhc-cCcceeEEEEEEeCccccc
Confidence 997 48889999999999999999987332211 1 1224579999999998 45689999999853
Q ss_pred --hhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhh
Q 016612 218 --ERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 290 (386)
Q Consensus 218 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i 290 (386)
+.+.+.+....... .+.+...+.++...++. +....+.+.++.+.+.+.|++.+ +...
T Consensus 263 ~~~~~~~~~~~~~~~~-~~~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~L~~~~--------------~~~~ 327 (409)
T PLN02656 263 RDPKIVERIKKYFDIL-GGPATFIQAAVPTILEQTDESFFKKTINILKQSSDICCDRIKEIP--------------CITC 327 (409)
T ss_pred ccHHHHHHHHHHHhhh-cCCCHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhCC--------------CCcC
Confidence 34555554443322 23455555555444431 22223333344444444444321 1100
Q ss_pred hhhccCCCCceEEEEeCCH------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEE
Q 016612 291 HYSQAKGAGSVLSFLTGSL------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 364 (386)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 364 (386)
. ..+. .|.++++.++.. ...+.+.+.+...|+.+.+|..+. .++++||+
T Consensus 328 ~-~~p~-gg~~~w~~l~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~fg-----------------------~~~~iRi~ 382 (409)
T PLN02656 328 P-HKPE-GSMAVMVKLNLSLLEDISDDIDFCFKLAREESVIILPGTAVG-----------------------LKNWLRIT 382 (409)
T ss_pred C-cCCC-eEEEEEEecchhhcCCCCCHHHHHHHHHHhCCEEEecchhcC-----------------------CCCeEEEE
Confidence 0 0111 245556665321 112334455566788877776521 24679999
Q ss_pred ecc--CChHHHHHHHHHHHhc
Q 016612 365 VGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 365 ~~~--~~~~~~i~~l~~~l~~ 383 (386)
++. +.+++.+++|++++.+
T Consensus 383 ~~~~~e~l~eal~rl~~~~~~ 403 (409)
T PLN02656 383 FAADPSSLEEALGRIKSFYLR 403 (409)
T ss_pred eCCCHHHHHHHHHHHHHHHHH
Confidence 985 5555666666666653
No 67
>PRK08361 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.8e-28 Score=226.46 Aligned_cols=293 Identities=18% Similarity=0.199 Sum_probs=193.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|.+. |.+ +++++.+++.+.+|. ++.++++++++++. ++..++++||.|++++|+|.++. ..++..|
T Consensus 63 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~g~~Vlv~~p~y~~~~----~~~~~~g 138 (391)
T PRK08361 63 WTHYTPNAGIPELREAIAEYYKKFYGVDVDVDNVIVTAGAYEATYLAFESLLEEGDEVIIPDPAFVCYV----EDAKIAE 138 (391)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCcccH----HHHHHcC
Confidence 4457665 776 788888887766553 24555555668887 45567899999999999999885 4555678
Q ss_pred cEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++. .|++++++.++++++++++++|+||||.+.+ +++|.++|+++++++|+||+|+...+.
T Consensus 139 ~~~~~v~~~~~~~~~~d~~~l~~~i~~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 218 (391)
T PRK08361 139 AKPIRIPLREENEFQPDPDELLELITKRTRMIVINYPNNPTGATLDKEVAKAIADIAEDYNIYILSDEPYEHFLYEGAKH 218 (391)
T ss_pred CEEEEEecCCccCCCCCHHHHHHhcccccEEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEEcccccceeCCCCC
Confidence 88888765 3789999999889999999999999999998 888999999999999999998643221
Q ss_pred -CC--CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc------HHHHHH
Q 016612 185 -RP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVE 255 (386)
Q Consensus 185 -~~--~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~ 255 (386)
.. ...+.++++.|+||.+ |.+|+|+||+++++ ++.+.+.........+.+...+.++...+.. +....+
T Consensus 219 ~~~~~~~~~~~i~~~s~SK~~-~~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~ 296 (391)
T PRK08361 219 YPMIKYAPDNTILANSFSKTF-AMTGWRLGFVIAPE-QVIKDMIKLHAYIIGNVASFVQIAGIEALRSKESWKAVEEMRK 296 (391)
T ss_pred CCHhhcCCCCEEEEecCchhc-CCcHhhhhhhccCH-HHHHHHHHHHhhhccCCChHHHHHHHHHhcCCcccHHHHHHHH
Confidence 11 1225689999999999 55689999999974 4555454444333334455555544443321 223333
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCC-HHhHHHHHhhc-CcceeccCCCCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS-LALSKHVVETT-KYFSITVSFGSVK 332 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~l-~~~gi~~~~G~~~ 332 (386)
.+.++.+.+.+.+++.+ +..+. ...++ ++++.++. .....++.+.+ ...|+.+.+|..+
T Consensus 297 ~~~~~~~~~~~~L~~~~--------------~~~~~----~p~g~~~~~~~l~~~~~~~~~l~~~l~~~~gv~v~pg~~f 358 (391)
T PRK08361 297 EYNERRKLVLKRLKEMP--------------HIKVF----EPKGAFYVFANIDETGMSSEDFAEWLLEKARVVVIPGTAF 358 (391)
T ss_pred HHHHHHHHHHHHHHhCC--------------CCeec----CCCEEEEEEEECCCCCCCHHHHHHHHHHhCCEEEcCchhh
Confidence 44444555555555432 11111 11333 45556642 22344555555 3468877777642
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
. ..++++|||+++. +++++.++.|++.+++
T Consensus 359 ~---------------------~~~~~~iRi~~~~~~~~l~~al~~l~~~l~~ 390 (391)
T PRK08361 359 G---------------------KAGEGYIRISYATSKEKLIEAMERMEKALEE 390 (391)
T ss_pred C---------------------CCCCCEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 1 1135789999984 4555566666666654
No 68
>PRK12414 putative aminotransferase; Provisional
Probab=99.96 E-value=3.2e-27 Score=221.52 Aligned_cols=287 Identities=18% Similarity=0.188 Sum_probs=190.4
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC-----ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +++++++++++++|.+ +.++++++++++. ++.+++++||+|++++|+|..+. ..++..
T Consensus 59 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~i~it~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~ 134 (384)
T PRK12414 59 HNQYAPMAGIAALREALAEKTERLYGARYDPASEVTVIASASEGLYAAISALVHPGDEVIYFEPSFDSYA----PIVRLQ 134 (384)
T ss_pred CCCcCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEECChHHHHHHHHHHhcCCCCEEEEeCCCccchH----HHHHHc
Confidence 4568776 876 8999999999988862 3555666668887 45668899999999999998875 445567
Q ss_pred CcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 118 GVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 118 g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
|.+++.++.+ |++++++.+++++++|++++|+||||.+++ +++|.++|+++|+++|+||+|....+.
T Consensus 135 g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~NPTG~~~s~~~~~~i~~~a~~~~~~ii~De~Y~~~~~~~~~~ 214 (384)
T PRK12414 135 GATPVAIKLSPEDFRVNWDEVAAAITPRTRMIIVNTPHNPSATVFSAADLARLAQLTRNTDIVILSDEVYEHVVFDGARH 214 (384)
T ss_pred CCEEEEEecCccccccCHHHHHhhcCcccEEEEEcCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEhhhhhhccCCCCCc
Confidence 8888887753 789999988889999999999999999974 788999999999999999998632221
Q ss_pred CCC----C-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHH
Q 016612 185 RPL----E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEK 256 (386)
Q Consensus 185 ~~~----~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 256 (386)
.+. . .+..+++.|+||.+ |.+|+|+||+++++ ++.+.+...........+...+.++...++. .....+.
T Consensus 215 ~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRiG~~v~~~-~l~~~l~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~~~~~ 292 (384)
T PRK12414 215 HSMARHRELAERSVIVSSFGKSY-HVTGWRVGYCLAPA-ELMDEIRKVHQFMVFSADTPMQHAFAEALAEPASYLGLGAF 292 (384)
T ss_pred cCcccCcCccCcEEEEecccccc-cCccceEEEEecCH-HHHHHHHHHHhheecCCCcHHHHHHHHHhcCChHHHHHHHH
Confidence 011 1 23579999999999 56689999999874 5555565555433444555555555444432 1122334
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-EeCC---HHhHHHHHhhcCcceeccCCCCcc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGS---LALSKHVVETTKYFSITVSFGSVK 332 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~---~~~~~~l~~~l~~~gi~~~~G~~~ 332 (386)
+.++.+.+.+.+++.. ..+. +..++++.| .++. ....+.+.+.+...|+.+.+|..+
T Consensus 293 ~~~~r~~l~~~L~~~g---------------~~~~----~~~gg~~~~~~~~~~~~~~~~~~~~~~l~~~gV~v~pg~~f 353 (384)
T PRK12414 293 YQRKRDLLARELAGSR---------------FELL----PSEGSFFMLARFRHFSDESDSDFVLRLIRDARVATIPLSAF 353 (384)
T ss_pred HHHHHHHHHHHHHhCC---------------Ceec----CCCcceEEEEcccccCCCCHHHHHHHHHHhCCEEEecchhh
Confidence 4455555555555431 1111 123444444 5532 122333335556678887777643
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 377 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 377 (386)
..- +.+++++||+++. +.+++.+.+
T Consensus 354 ~~~-------------------~~~~~~iRis~~~-~~~~~~~~~ 378 (384)
T PRK12414 354 YTD-------------------GTDTGLIRLSFSK-DDATLVEGA 378 (384)
T ss_pred cCC-------------------CCCCCEEEEEecC-CHHHHHHHH
Confidence 210 1235789999996 344444444
No 69
>PRK08068 transaminase; Reviewed
Probab=99.96 E-value=7.7e-28 Score=226.34 Aligned_cols=286 Identities=14% Similarity=0.125 Sum_probs=186.9
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC--C-c-eEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA--D-R-ALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~-~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|++. |.+ +++++.+++.+.+|. + + .|++++| ++++.. +..++++||.|++++|+|+.+. ..++..
T Consensus 63 ~~~Y~~~~g~~~lr~aia~~~~~~~g~~~~~~~~i~it~G~~~~l~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~ 138 (389)
T PRK08068 63 NHKYSPFRGYPFLKEAAADFYKREYGVTLDPETEVAILFGGKAGLVELPQCLMNPGDTILVPDPGYPDYL----SGVALA 138 (389)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHhc
Confidence 4568766 776 788888888766663 2 3 4555555 588864 5667899999999999999885 455678
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
|++++.++.+ |++++++.+.+++++|++++|+||||.+++ +++|.++|++++++||+||+|..-.+.
T Consensus 139 g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPTG~~~s~~~~~~l~~la~~~~~~ii~Deay~~~~~~~~~ 218 (389)
T PRK08068 139 RAQFETMPLIAENNFLPDYTKIPEEVAEKAKLMYLNYPNNPTGAVATKAFFEETVAFAKKHNIGVVHDFAYGAIGFDGQK 218 (389)
T ss_pred CCEEEEeecccccCCCCCHHHHHHhccccceEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCeEEEEehhhhhhccCCCC
Confidence 8998888763 567888888888999999999999999997 568888999999999999998531111
Q ss_pred --CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC----cHHHHH
Q 016612 185 --RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRV 254 (386)
Q Consensus 185 --~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 254 (386)
... ..+..+++.|+||.+ |.+|+|+||++++ +.+.+.+.........+.++..+.++...+. .+....
T Consensus 219 ~~s~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 296 (389)
T PRK08068 219 PVSFLQTPGAKDVGIELYTLSKTF-NMAGWRVAFAVGN-ESVIEAINLLQDHLFVSLFGAIQDAAIEALLSDQSCVAELV 296 (389)
T ss_pred CcChhhCCCccCCEEEEecchhcc-CCccceeEeEecC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 111 123568999999999 5678999999976 5565555544443333333323333333221 122333
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCHHhHHHHHhhcCc-ceeccCCCCcc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKY-FSITVSFGSVK 332 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~-~gi~~~~G~~~ 332 (386)
+.+.++.+.+.+.+++.. + .+. ...++ ++++.+++......+.+.+.. .|+.+.+|..+
T Consensus 297 ~~~~~~r~~~~~~L~~~g---------~------~~~----~~~g~~~~~v~~~~~~~~~~~~~~l~~~~gi~v~pg~~f 357 (389)
T PRK08068 297 ARYESRRNAFISACREIG---------W------EVD----APKGSFFAWMPVPKGYTSEQFADLLLEKAHVAVAPGNGF 357 (389)
T ss_pred HHHHHHHHHHHHHHHHCC---------C------ccc----CCCeeEEEEEECCCCCCHHHHHHHHHHhCCEEEecchHh
Confidence 344444444555554321 1 111 12344 457777543345667777654 58887776542
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 378 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 378 (386)
. ..+++++||+++.. .+.+.+.++
T Consensus 358 ~---------------------~~~~~~iRi~~~~~-~~~l~~al~ 381 (389)
T PRK08068 358 G---------------------EHGEGYVRVGLLTD-EERLREAVE 381 (389)
T ss_pred C---------------------ccCCCeEEEEEcCC-HHHHHHHHH
Confidence 1 01357899999853 355555554
No 70
>PRK13355 bifunctional HTH-domain containing protein/aminotransferase; Provisional
Probab=99.96 E-value=2.4e-27 Score=230.05 Aligned_cols=292 Identities=16% Similarity=0.161 Sum_probs=187.2
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC--C-ceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA--D-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
..|++. |.+ +|+++.+++.+..+. + +.|++++|+ ++++ ++.+++++||+|++++|+|+.+. ..++..|.
T Consensus 179 ~~Y~~~~G~~~lReaia~~~~~~~~~~~~~~~I~it~G~~eal~~~~~~l~~~Gd~Vli~~P~y~~y~----~~~~~~g~ 254 (517)
T PRK13355 179 EGYSDSKGLFSARKAIMQYAQLKGLPNVDVDDIYTGNGVSELINLSMSALLDDGDEVLIPSPDYPLWT----ACVNLAGG 254 (517)
T ss_pred CCCCCCcChHHHHHHHHHHHHhcCCCCCChhHEEEeCcHHHHHHHHHHHhCCCCCEEEEcCCCCcCHH----HHHHHCCC
Confidence 468887 775 788888888665432 3 455566554 8887 45668899999999999999885 45567788
Q ss_pred EEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----
Q 016612 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----- 184 (386)
Q Consensus 120 ~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----- 184 (386)
+++.++++ |++++++++++++++|++++|+||||.+++ +++|+++|++||++||+||+|..-.+.
T Consensus 255 ~~v~~~~~~~~~~~~d~~~l~~~~~~~~k~i~i~nP~NPTG~v~~~~~l~~i~~~a~~~~~~ii~DE~Y~~~~~~~~~~~ 334 (517)
T PRK13355 255 TAVHYRCDEQSEWYPDIDDIRSKITSRTKAIVIINPNNPTGALYPREVLQQIVDIAREHQLIIFSDEIYDRLVMDGLEHT 334 (517)
T ss_pred EEEEeecCcccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhhcCCCCCcc
Confidence 88887642 789999999999999999999999999997 888999999999999999998632211
Q ss_pred CCCCC--C-ccEEEeccccccccCCCceEEEEEEc-ChhH----HHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHH
Q 016612 185 RPLEL--G-ADIVMHSATKFIAGHSDVMAGVLAVK-GERL----AKELYFLQNAEGSGLAPFDCWICLRGVKT---MALR 253 (386)
Q Consensus 185 ~~~~~--~-~di~~~S~sK~~~g~~g~~~G~i~~~-~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 253 (386)
+.... + ..+++.||||.+ +.+|+|+||++++ ++.+ .+.+...... ....+...+.++...+.. ....
T Consensus 335 s~~~~~~~~~vi~~~S~SK~~-~~~G~RiG~~i~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~a~~~aL~~~~~~~~~ 412 (517)
T PRK13355 335 SIASLAPDLFCVTFSGLSKSH-MIAGYRIGWMILSGNKRIAKDYIEGLNMLANM-RLCSNVPAQSIVQTALGGHQSVKDY 412 (517)
T ss_pred cHHHhCCCCeEEEEecchhhc-cCcccceEEEEeeCchhhHHHHHHHHHHHhcC-cCCcChHHHHHHHHHhcCCccHHHH
Confidence 11111 1 245679999998 5668999999964 2322 2222222221 123444455555444432 1111
Q ss_pred HH---HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-EeCCH-----HhHHHHHhhcCccee
Q 016612 254 VE---KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGSL-----ALSKHVVETTKYFSI 324 (386)
Q Consensus 254 ~~---~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~-----~~~~~l~~~l~~~gi 324 (386)
.. +..+..+.+.+.|+ .++++.+. ...|+++.| .++.. ...+.+.+.+...|+
T Consensus 413 ~~~~~~~~~~r~~l~~~L~--------------~~~g~~~~----~p~g~fy~~~~l~~~~~~~~~~~~~~~~ll~~~gV 474 (517)
T PRK13355 413 LVPGGRVYEQRELVYNALN--------------AIPGISAV----KPKAAFYIFPKIDVKKFNIHDDEQFALDLLHDKKV 474 (517)
T ss_pred HHHHHHHHHHHHHHHHHHh--------------cCCCcccC----CCCeeeEEEeecCcccCCCCCHHHHHHHHHHhCCE
Confidence 11 11222222333332 23333322 234566655 55421 123344455666788
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
.+.+|..+. .-.+++||||+.. +.+++.+++|.+++++
T Consensus 475 ~v~pg~~F~---------------------~~~~~~~Ris~~~~~~~l~~a~~rl~~~~~~ 514 (517)
T PRK13355 475 LIVQGTGFN---------------------WDKPDHFRVVYLPRLEDLEDAMDRLADFFSY 514 (517)
T ss_pred EEeCcchhC---------------------CCCcCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 877776521 0136789999963 6777778888877764
No 71
>PRK08912 hypothetical protein; Provisional
Probab=99.96 E-value=6.2e-28 Score=226.94 Aligned_cols=295 Identities=17% Similarity=0.160 Sum_probs=192.5
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +|+++.+++.+.+|. + +.++++++++++. ++..++++||+|++++|.|+.+. .+++..
T Consensus 56 ~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~ 131 (387)
T PRK08912 56 SNQYPPMMGLPELRQAVAAHYARFQGLDLDPETEVMVTSGATEALAAALLALVEPGDEVVLFQPLYDAYL----PLIRRA 131 (387)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcccEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHc
Confidence 4568876 876 889999888877664 2 3444555568886 45667899999999999998885 556788
Q ss_pred CcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 118 GVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 118 g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
|.+++.++.+ |++++++.+.++++++++++|+||||.+.+ +++|.++|+++++++|+||+|+...+.
T Consensus 132 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 211 (387)
T PRK08912 132 GGVPRLVRLEPPHWRLPRAALAAAFSPRTKAVLLNNPLNPAGKVFPREELALLAEFCQRHDAVAICDEVWEHVVFDGRRH 211 (387)
T ss_pred CCEEEEEecCcccCcCCHHHHHHHhCccceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCeEEEEhhhhhhcccCCCCC
Confidence 8888877653 689999988889999999999999999986 777999999999999999998532211
Q ss_pred ----CCCC-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHH
Q 016612 185 ----RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVE 255 (386)
Q Consensus 185 ----~~~~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 255 (386)
.... .+.+++++|+||.+ |.+|+|+||+++++ .+.+.+...........++..+.++...+.. +....+
T Consensus 212 ~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~-~~~~~l~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 289 (387)
T PRK08912 212 IPLMTLPGMRERTVKIGSAGKIF-SLTGWKVGFVCAAP-PLLRVLAKAHQFLTFTTPPNLQAAVAYGLGKPDDYFEGMRA 289 (387)
T ss_pred cChhhCCCccCceEEEeechhhc-cCcCceeEEEecCH-HHHHHHHHHHhhccccCChHHHHHHHHHHhCCHHHHHHHHH
Confidence 1111 25689999999998 66789999999874 4555554444333333333333333332221 122233
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC---HHhHHHHHhhc-CcceeccCCCCc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVETT-KYFSITVSFGSV 331 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l-~~~gi~~~~G~~ 331 (386)
.+.++.+.+.+.|++.. + .+. .+. .+.++++.++. ......+.+.+ ...|+.+.+|..
T Consensus 290 ~~~~~~~~l~~~L~~~g---------~------~~~--~~~-g~~~l~~~l~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 351 (387)
T PRK08912 290 DLARSRDRLAAGLRRIG---------F------PVL--PSQ-GTYFLTVDLAPLGLAEDDVAFCRRLVEEAGVAAIPVSA 351 (387)
T ss_pred HHHHHHHHHHHHHHhCC---------C------ccc--CCC-cceEEEecccccCCCCCHHHHHHHHHhcCCEEEecchh
Confidence 34444444555554321 1 111 111 24556666643 12345566654 456887777654
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 332 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
+..- .-..+++||+++. +.+++.+++|++++++
T Consensus 352 f~~~-------------------~~~~~~iRl~~~~~~~~l~~~l~rl~~~l~~ 386 (387)
T PRK08912 352 FYEE-------------------DPVTSVVRFCFAKRDATLDEAVERLAAARRR 386 (387)
T ss_pred hCCC-------------------CCCCCEEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 2100 0125789999985 5566667777776653
No 72
>PTZ00377 alanine aminotransferase; Provisional
Probab=99.96 E-value=5.9e-28 Score=232.42 Aligned_cols=198 Identities=18% Similarity=0.214 Sum_probs=145.1
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcH-HHHHHHH-HHhc-CCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSG-MAALAAV-THLL-GTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g-t~al~~~-~~~~-~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
....|+.. |.+ +|+++.+++.+..|.+ +.|++++| ++++..+ ..++ ++||.|++++|.|+.+. ..++.
T Consensus 107 ~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~~gD~Vlv~~P~y~~y~----~~~~~ 182 (481)
T PTZ00377 107 GTGAYTDSAGYPFVRKAVAAFIERRDGVPKDPSDIFLTDGASSGIKLLLQLLIGDPSDGVMIPIPQYPLYS----AAITL 182 (481)
T ss_pred cccCcCcccCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhccCCCCEEEECCCCchhHH----HHHHH
Confidence 34568887 887 8999999988765543 45555555 5999755 5566 79999999999999885 55567
Q ss_pred CCcEEEEeCCC-------CHHHHHhhhCC------CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 117 TGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 117 ~g~~~~~v~~~-------d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
.|.+++.++.+ |++++++.+++ +++++++++|+||||.+++ +++|+++|+++|++||+||+|..
T Consensus 183 ~g~~~v~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~l~l~~P~NPTG~~~s~e~~~~i~~~a~~~~~~iI~De~Y~~ 262 (481)
T PTZ00377 183 LGGKQVPYYLDEEKGWSLDQEELEEAYEQAVRNGITPRALVVINPGNPTGQVLTRDVMEEIIKFCYEKGIVLMADEVYQE 262 (481)
T ss_pred cCCEEEEEEeccccCCCCCHHHHHHHHHHHHhcCCCeeEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhHh
Confidence 88888888753 67899888764 7999999999999999997 88999999999999999999864
Q ss_pred CCcc------CC------CCC-----CccEEEeccccccccCCCceEEEEEE--cChhHHHHHHHhhhhcCCCCChhhHH
Q 016612 181 PVLS------RP------LEL-----GADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCW 241 (386)
Q Consensus 181 ~~~~------~~------~~~-----~~di~~~S~sK~~~g~~g~~~G~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (386)
-.+. +. ... ...+++.|+||.+.+.+|+|+||+++ .++++.+.+...... ....+...+.
T Consensus 263 l~~~~~~~~~s~~~~~~~l~~~~~~~~~vi~~~S~SK~~~~~~GlRiG~~~~~~~p~~li~~l~~~~~~-~~~~~~~~Q~ 341 (481)
T PTZ00377 263 NIYDGEKPFISFRKVLLELPAEYNTDVELVSFHSTSKGIIGECGRRGGYFELTNIPPEVREQIYKLASI-NLCSNVVGQL 341 (481)
T ss_pred hccCCCCCcccHHHHHHhhcccccCCeEEEEEecCCcccccCCcCceEEEEEeCCCHHHHHHHHHHhhe-ecCCChHHHH
Confidence 2221 10 011 13588999999865777899999987 246666666555432 2234555555
Q ss_pred HHHhcC
Q 016612 242 ICLRGV 247 (386)
Q Consensus 242 ~~~~~~ 247 (386)
++...+
T Consensus 342 a~~~~l 347 (481)
T PTZ00377 342 MTGLMC 347 (481)
T ss_pred HHHHHh
Confidence 554444
No 73
>PLN02450 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=6.7e-27 Score=223.46 Aligned_cols=292 Identities=15% Similarity=0.171 Sum_probs=192.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcC----CC-ceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcc-
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDK----AD-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP- 115 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g----~~-~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~- 115 (386)
...|... |.+ +|+++.+++.+.+| .+ +.|++++|+ +++. ++.++++|||.|++++|.|+.+.. .+.
T Consensus 79 l~~Y~~~~G~~~LR~aiA~~l~~~~~~~~~v~~~~Iiit~Ga~~al~~l~~~l~~pGd~Vlv~~P~Y~~~~~----~~~~ 154 (468)
T PLN02450 79 LALFQDYHGLPAFKNALAEFMSEIRGNKVTFDPNKLVLTAGATSANETLMFCLAEPGDAFLLPTPYYPGFDR----DLKW 154 (468)
T ss_pred hhcCCCCCChHHHHHHHHHHHHHhhCCCCCcChHHeEEccChHHHHHHHHHHhCCCCCEEEECCCCCCchHH----HHhh
Confidence 3457777 876 89999999987655 22 456666665 8887 456678999999999999998853 333
Q ss_pred cCCcEEEEeCCC-------CHHHHHhhhC------CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCC
Q 016612 116 KTGVVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 116 ~~g~~~~~v~~~-------d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~ 179 (386)
..|++++.++++ |++++++.+. .+++++++++|+||||.+++ +++|.++|+++|++||+||+|+
T Consensus 155 ~~g~~~v~v~~~~~~~~~~~~~~le~~~~~~~~~~~~~k~v~l~nP~NPTG~~~s~e~l~~ll~~a~~~~~~iI~DE~Y~ 234 (468)
T PLN02450 155 RTGVEIVPIHCSSSNGFQITESALEEAYQQAQKLNLKVKGVLITNPSNPLGTTTTRTELNLLVDFITAKNIHLISDEIYS 234 (468)
T ss_pred cCCcEEEEEecCCccCCcCCHHHHHHHHHHHHhcCCCeeEEEEecCCCCCCcccCHHHHHHHHHHHHHCCcEEEEEcccc
Confidence 578898888752 5688887764 37899999999999999986 6788999999999999999987
Q ss_pred CCCcc-----CCC------------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 180 SPVLS-----RPL------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 180 ~~~~~-----~~~------------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
...+. +.. ..+..+++.|+||.+ +.+|+|+||++++++.+.+.+...... ...+...+.+
T Consensus 235 ~~~f~~~~~~s~l~~~~~~~~~~~~~~~~vi~l~S~SK~~-~l~GlRiG~li~~~~~l~~~~~~~~~~--~~~s~~~Q~a 311 (468)
T PLN02450 235 GTVFDSPGFVSVMEVLKDRKLENTDVSNRVHIVYSLSKDL-GLPGFRVGAIYSNDEMVVSAATKMSSF--GLVSSQTQYL 311 (468)
T ss_pred ccccCCCCcccHHHHhhhcccccCCCCCcEEEEEeccccC-CCCCccEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHH
Confidence 32211 101 134679999999999 556899999999866555544433222 2345555666
Q ss_pred HHhcCCc-------HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC-CceEEEEeCCH-----
Q 016612 243 CLRGVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA-GSVLSFLTGSL----- 309 (386)
Q Consensus 243 ~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~----- 309 (386)
+...++. +......+.+..+.+.+.|++.. + .+. ... |.++|+.++..
T Consensus 312 ~~~~L~~~~~~~~~l~~~~~~l~~rr~~l~~~L~~~g---------i------~~~----~~~~g~flwi~l~~~~~~~~ 372 (468)
T PLN02450 312 LSALLSDKKFTKNYLEENQKRLKQRQKKLVSGLEAAG---------I------KCL----KSNAGLFCWVDMRHLLKSNT 372 (468)
T ss_pred HHHHhCCchhHHHHHHHHHHHHHHHHHHHHHHHHHcC---------C------ccc----CCCceEEEEEEchHhcCcCC
Confidence 5555443 12223333444444444444321 1 111 123 34666666421
Q ss_pred -HhHHHHHhhc-CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhcC
Q 016612 310 -ALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRTG 384 (386)
Q Consensus 310 -~~~~~l~~~l-~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~~ 384 (386)
....++.+.+ ...|+.+.+|..+. ...+++|||+++. +++++.+++|++++++.
T Consensus 373 ~~~~~~l~~~ll~~~gV~v~PG~~f~---------------------~~~~g~~Rl~f~~~~~~~l~~~l~ri~~~l~~~ 431 (468)
T PLN02450 373 FEAEMELWKKIVYEVKLNISPGSSCH---------------------CTEPGWFRVCFANMSEETLDLAMKRLKSFVESD 431 (468)
T ss_pred chHHHHHHHHHHHhCCEEEeCccccC---------------------CCCCCEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 1112334333 34688888876532 1136789999983 56777788888887653
No 74
>PRK15481 transcriptional regulatory protein PtsJ; Provisional
Probab=99.96 E-value=2.9e-27 Score=225.22 Aligned_cols=290 Identities=16% Similarity=0.140 Sum_probs=195.7
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCCceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEE
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKADRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 121 (386)
...|++. |.+ +++.+.+++....+.++.|++++| ++++. ++.++++|||.|++++|+|+.+. ..++..|+++
T Consensus 114 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~Iiit~G~~~al~~~~~~l~~pgd~Vlv~~P~y~~~~----~~~~~~g~~~ 189 (431)
T PRK15481 114 PRLYGDAPVSPELHAWAARWLRDDCPVAFEIDLTSGAIDAIERLLCAHLLPGDSVAVEDPCFLSSI----NMLRYAGFSA 189 (431)
T ss_pred hhhcCCcCCCHHHHHHHHHHHhhccCCcCeEEEecCcHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCeE
Confidence 3457776 654 677777776654444445555555 58887 45567899999999999999885 5666889999
Q ss_pred EEeCCC----CHHHHHhhhCCCceEEEEe-CCCCCCcccccH---HHHHHHHHHc-CCEEEEeCCCCCCCc---cCCC--
Q 016612 122 KRVNTC----DLDEVASAIGPWTKLVWVE-SPTNPRQQICDI---RKIAEMAHAH-GALLLVDNSIMSPVL---SRPL-- 187 (386)
Q Consensus 122 ~~v~~~----d~~~l~~~~~~~~~~v~~~-~~~nptG~~~~l---~~i~~la~~~-~~~li~D~a~~~~~~---~~~~-- 187 (386)
+.++.+ |++++++++++++++++++ +||||||.+++. ++|.++|+++ +++||+||+|..-.. ....
T Consensus 190 ~~v~~~~~g~~~~~l~~~~~~~~k~i~~~p~p~NPTG~~~s~~~~~~l~~la~~~~~~~ii~De~Y~~~~~~~~~~~~~~ 269 (431)
T PRK15481 190 SPVSVDAEGMQPEKLERALAQGARAVILTPRAHNPTGCSLSARRAAALRNLLARYPQVLVIIDDHFALLSSSPYHSVIPQ 269 (431)
T ss_pred EeeccCCCCCCHHHHHHHHhcCCCEEEECCCCCCCCCccCCHHHHHHHHHHHHhcCCceEEecCchhhhccCCCCCCCcC
Confidence 998864 7889999888789998887 999999999985 5999999999 999999999863211 1111
Q ss_pred CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc------HHHHHHHHHHHH
Q 016612 188 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNA 261 (386)
Q Consensus 188 ~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 261 (386)
.....+++.||||.++ +|+|+||++++ +.+.+.+...........+...+.++...+.. +....+.+.++.
T Consensus 270 ~~~~vi~~~SfSK~~~--~GlRiG~~i~~-~~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~~l~~~~~~~~~~r 346 (431)
T PRK15481 270 TTQRWALIRSVSKALG--PDLRLAFVASD-SATSARLRLRLNSGTQWVSHLLQDLVYACLTDPEYQARLAQARLFYAQRR 346 (431)
T ss_pred CCCCEEEEeeeccccC--CCceeEEEeCC-HHHHHHHHHHHhccccCCCHHHHHHHHHHHhCccHHHHHHHHHHHHHHHH
Confidence 2246799999999995 58999999986 44555554443333334566666665554432 122233344444
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
+.+.+.+++.. +. + .. +..|.++++.++. ....+.+.+...|+.+.+|..+.. +
T Consensus 347 ~~~~~~L~~~~---------~~------~--~~-p~gg~f~~~~l~~--~~~~~~~~l~~~gV~v~pg~~f~~---~--- 400 (431)
T PRK15481 347 QKLARALQQYG---------IA------I--PS-PGDGLNLWLPLDT--DSQATALTLAKSGWLVREGEAFGV---S--- 400 (431)
T ss_pred HHHHHHHHHcC---------Cc------c--cc-CCCeEEEEEECCC--CHHHHHHHHHHCCcEEecCCcccc---C---
Confidence 55555555421 11 1 01 2246777777753 245566666677888888765320 0
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHh
Q 016612 342 SHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALR 382 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~ 382 (386)
...+++|||++. +++++.++.|++++.
T Consensus 401 --------------~~~~~iRis~~~~~~~~i~~~~~~l~~~~~ 430 (431)
T PRK15481 401 --------------APSHGLRITLSTLNDAEINRLAADLHQALN 430 (431)
T ss_pred --------------CCCCeEEEEcCCCChHHHHHHHHHHHHHhc
Confidence 013579999984 677778888887764
No 75
>PRK09276 LL-diaminopimelate aminotransferase; Provisional
Probab=99.96 E-value=3.8e-27 Score=221.52 Aligned_cols=287 Identities=16% Similarity=0.116 Sum_probs=188.3
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|++. |.+ +++++.+++.+.+|. ++.+++++|+ +++..+ ..++++||.|++++|+|+.+. ..++..
T Consensus 62 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~ii~t~G~~~~i~~~~~~~~~~gd~Vl~~~P~y~~~~----~~~~~~ 137 (385)
T PRK09276 62 NHQYPSYEGMLEFRKAVADWYKRRFGVELDPETEVISLIGSKEGIAHIPLAFVNPGDVVLVPDPGYPVYK----IGTIFA 137 (385)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcChH----HHHHHc
Confidence 4568776 766 889999988877664 2346666665 888754 557899999999999999885 445678
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
|.+++.++.+ |++++++.+.+++++|++++|+||||.+.+ +++|.++|+++|++||+||+|....+.
T Consensus 138 g~~~~~v~~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 217 (385)
T PRK09276 138 GGEPYFMPLKEENGFLPDLDAIPEDVAKKAKLMFINYPNNPTGAVADLEFFEEVVDFAKKYDIIVCHDAAYSEIAYDGYK 217 (385)
T ss_pred CCEEEEEecCCCCCCcCCHHHHHHhccccceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEecchhheecCCCC
Confidence 8888887652 578888888888999999999999999997 688999999999999999998632211
Q ss_pred --CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH----HHHH
Q 016612 185 --RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM----ALRV 254 (386)
Q Consensus 185 --~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 254 (386)
... ..+.++++.|+||.+ |.+|+|+||++++ +.+.+.+.........+.+...+.++...+... ....
T Consensus 218 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 295 (385)
T PRK09276 218 PPSFLEVPGAKDVGIEFHSLSKTY-NMTGWRIGFAVGN-ADLIAGLGKVKSNVDSGVFQAIQEAGIAALNGPQEVVEELR 295 (385)
T ss_pred CCChhccCCCcCCEEEEecchhhc-CCcchhheeeeCC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHcCcHHHHHHHH
Confidence 111 124568999999999 5678999999986 456555555444333344444444444444321 2222
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKS 333 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~ 333 (386)
+.+.++.+.+.+.+++. +..++ .+. .+.++++.+++.....++.+.+. ..|+.+.+|..+.
T Consensus 296 ~~~~~~~~~l~~~L~~~---------------~~~~~--~~~-~~~~~~v~~~~~~~~~~l~~~ll~~~gi~v~~g~~f~ 357 (385)
T PRK09276 296 KIYQERRDILVEGLRKL---------------GLEVE--PPK-ATFYVWAPVPKGYTSAEFATLLLDKAGVVVTPGNGFG 357 (385)
T ss_pred HHHHHHHHHHHHHHHhC---------------CCccc--CCC-cceEEEEECCCCCCHHHHHHHHHHhCCEEECCchhhC
Confidence 33334444444444432 11111 111 24446777754333555666553 4688777776421
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 378 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 378 (386)
...++++|||++. +.+++.+.++
T Consensus 358 ---------------------~~~~~~~Ris~~~-~~~~l~~~l~ 380 (385)
T PRK09276 358 ---------------------EYGEGYFRIALTV-PDERIEEAVE 380 (385)
T ss_pred ---------------------CCCCCeEEEEeCC-CHHHHHHHHH
Confidence 0125689999985 3344444443
No 76
>PRK07682 hypothetical protein; Validated
Probab=99.96 E-value=3.6e-27 Score=221.13 Aligned_cols=293 Identities=16% Similarity=0.189 Sum_probs=197.1
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCc-HHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTS-GMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~-gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +|+++.+++.+.+|. ++.|++++ +++++.+ +..++++||.|++++|+|+.+. ..++..
T Consensus 50 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~ 125 (378)
T PRK07682 50 YTSYTANAGLLELRQEIAKYLKKRFAVSYDPNDEIIVTVGASQALDVAMRAIINPGDEVLIVEPSFVSYA----PLVTLA 125 (378)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCchhhH----HHHHHc
Confidence 4568765 776 899999998877664 23455555 5689874 4567899999999999998775 445566
Q ss_pred CcEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC--
Q 016612 118 GVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-- 185 (386)
Q Consensus 118 g~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~-- 185 (386)
|.+++.++. .|++++++++.++++++++++|+||||.+.+ +++|.++|+++++++|+||+|....+..
T Consensus 126 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~ 205 (378)
T PRK07682 126 GGVPVPVATTLENEFKVQPAQIEAAITAKTKAILLCSPNNPTGAVLNKSELEEIAVIVEKHDLIVLSDEIYAELTYDEAY 205 (378)
T ss_pred CCEEEEeecCCccCCCCCHHHHHhhcCcccEEEEEECCCCCcCcCcCHHHHHHHHHHHHHcCcEEEEehhhhhcccCCCC
Confidence 777777764 2789999999889999999999999999985 8899999999999999999987433211
Q ss_pred -----CCC-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHH
Q 016612 186 -----PLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVE 255 (386)
Q Consensus 186 -----~~~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 255 (386)
... .+.++++.|+||.+ +.+|+|+||++++ +.+.+.+...........+...+.++...++. +....+
T Consensus 206 ~~~~~~~~~~~~~i~~~S~SK~~-~~~GlR~G~~~~~-~~~i~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~ 283 (378)
T PRK07682 206 TSFASIKGMRERTILISGFSKGF-AMTGWRLGFIAAP-VYFSEAMLKIHQYSMMCAPTMAQFAALEALRAGNDDVIRMRD 283 (378)
T ss_pred CChhhcccccCCEEEEecCcccc-cChhhhhhhhhcC-HHHHHHHHHHHHhhccCCCHHHHHHHHHHHhCChHHHHHHHH
Confidence 011 24679999999999 5568999999987 45666555444433334455555554444432 233334
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-EeC-CHHhHHHHHhhc-CcceeccCCCCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTG-SLALSKHVVETT-KYFSITVSFGSVK 332 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~-~~~~~~~l~~~l-~~~gi~~~~G~~~ 332 (386)
.+.++.+.+.+.|++.. +. +. ...++++.| .+. .......+.+.+ ...|+.+.+|..+
T Consensus 284 ~~~~~~~~~~~~L~~~~---------~~------~~----~p~g~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f 344 (378)
T PRK07682 284 SYRKRRNFFVTSFNEIG---------LT------CH----VPGGAFYAFPSISSTGLSSEEFAEQLLLEEKVAVVPGSVF 344 (378)
T ss_pred HHHHHHHHHHHHHHHCC---------Cc------cC----CCCeeEEEEEeccCCCCCHHHHHHHHHHhCCEEEcCchhh
Confidence 45555555666665431 11 10 123444444 442 122345566654 3568888877652
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
. ...++++|||++. +++++.+++|++++++.
T Consensus 345 ~---------------------~~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 377 (378)
T PRK07682 345 G---------------------ESGEGFIRCSYATSLEQLQEAMKRMKRFVENK 377 (378)
T ss_pred C---------------------cCCCCeEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 1 0125789999985 67777888888887653
No 77
>PRK09147 succinyldiaminopimelate transaminase; Provisional
Probab=99.96 E-value=7.3e-27 Score=220.26 Aligned_cols=296 Identities=19% Similarity=0.214 Sum_probs=193.5
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC-----ceEEeCcHH-HHHHH-HHHhcCC---CCEEEecCCCCCcHHHHHhh
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGM-AALAA-VTHLLGT---GEEIVAGDDLYGGTDRLLSR 112 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~gt-~al~~-~~~~~~~---g~~Vlv~~~~~~~~~~~~~~ 112 (386)
....|.+. |.+ +|+++.+++.+.+|.+ +.|++++|+ +++.. +..++++ ||.|++++|.|+.+. .
T Consensus 57 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~~~i~it~G~~~al~~~~~~l~~~~~~gd~vlv~~P~y~~~~----~ 132 (396)
T PRK09147 57 GLASYPTTAGLPALREAIAAWLERRYGLPALDPATQVLPVNGSREALFAFAQTVIDRDGPGPLVVCPNPFYQIYE----G 132 (396)
T ss_pred hhcCCCCCCCCHHHHHHHHHHHHHHhCCCcCCccceEEECCChHHHHHHHHHHHcCCCCCCCEEEEcCCCccchH----H
Confidence 35668877 776 8999999998876632 367666665 88874 4557899 999999999998885 5
Q ss_pred hcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 113 VTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 113 ~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
+++..|.+++.++.+ |++++++.+.++++++++++|+||||.+++ +++|.++|++|+++||+||+|....
T Consensus 133 ~~~~~g~~~~~vp~~~~~~~~~d~~~l~~~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 212 (396)
T PRK09147 133 AALLAGAEPYFLNCDPANNFAPDFDAVPAEVWARTQLLFVCSPGNPTGAVLPLDDWKKLFALSDRYGFVIASDECYSEIY 212 (396)
T ss_pred HHHhcCCEEEEeccCccccCccCHHHHHHHHhhccEEEEEcCCCCCcCccCCHHHHHHHHHHHHHcCeEEEeeccccccc
Confidence 566788999988763 678888777778999999999999999985 7888999999999999999986432
Q ss_pred ccC---C---C---------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC
Q 016612 183 LSR---P---L---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (386)
Q Consensus 183 ~~~---~---~---------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
+.. + . ..+..+++.|+||.+ +.+|+|+||++++ +.+.+.+...........+...+.+....+
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-~~~GlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~a~~~~~ 290 (396)
T PRK09147 213 FDEAAPPLGLLEAAAELGRDDFKRLVVFHSLSKRS-NVPGLRSGFVAGD-AALLKKFLLYRTYHGCAMPPAVQAASIAAW 290 (396)
T ss_pred cCCCCCCchhhhhccccCccccccEEEEecccccc-CCccceeeeecCC-HHHHHHHHHHhhhcccCCCHHHHHHHHHHh
Confidence 111 0 0 124569999999988 4568999999987 455555554444334455555555544433
Q ss_pred Cc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhc-Ccce
Q 016612 248 KT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFS 323 (386)
Q Consensus 248 ~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g 323 (386)
.. +....+.+.++.+.+.+.+++. +. + .. +..|.++++.++. ....+.+.+ ...|
T Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~L~~~----------~~------~--~~-p~~g~f~~~~~~~--~~~~~~~~ll~~~g 349 (396)
T PRK09147 291 NDEAHVRENRALYREKFDAVTPILAPV----------LD------V--QL-PDAGFYLWAKVPG--DDTEFARRLYADYN 349 (396)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHh----------cC------C--CC-CCeeEEEEEECCC--CHHHHHHHHHHhCC
Confidence 21 2222333344444444444321 10 0 01 2246677777751 234454544 3567
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
+.+.+|..+...... .....+++||+++. ++.++.+++|++.++
T Consensus 350 v~v~pg~~f~~~~~~---------------~~~~~~~iRi~~~~~~~~l~~~l~rl~~~~~ 395 (396)
T PRK09147 350 VTVLPGSYLAREAHG---------------VNPGAGRVRIALVAPLAECVEAAERIVDFCR 395 (396)
T ss_pred EEEeCCccccccccC---------------CCCCCCeEEEEecCCHHHHHHHHHHHHHHhc
Confidence 877777653210000 00125789999975 555566666666553
No 78
>KOG0259 consensus Tyrosine aminotransferase [Amino acid transport and metabolism]
Probab=99.96 E-value=2.1e-27 Score=206.66 Aligned_cols=328 Identities=17% Similarity=0.168 Sum_probs=212.7
Q ss_pred CCccceeeccCCCCCC-CCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcC----CCceEEeCcH
Q 016612 7 PGVSTLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----ADRALCFTSG 79 (386)
Q Consensus 7 ~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~~~~g 79 (386)
++....++.++.++.+ ||.+........+ ...++.....++|++. |.+ .|+++.+.+.+-.. +++.++++++
T Consensus 57 p~~~k~iipl~~GDPsv~~~~~ts~~a~~A-v~~al~Sgk~N~Yaps~G~~~AR~AVAeYl~~~l~~kl~a~DV~ltsGC 135 (447)
T KOG0259|consen 57 PEKKKPILPLGHGDPSVYPCFRTSQEAEQA-VVDALRSGKGNGYAPSVGILPARRAVAEYLNRDLPNKLTADDVVLTSGC 135 (447)
T ss_pred cccCceeccCCCCCCCccccccCCHHHHHH-HHHHHhcCCCCCcCCccccHHHHHHHHHHhhcCCCCccCcCceEEeccc
Confidence 3333366666655444 6665544333222 2335567888999998 886 68888888665433 3466666666
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCC
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
++|+. ++.++.+||..||+|+|+|+-|. ..+...|++++.++.. |++.++..++++|.++++.||+||
T Consensus 136 ~qAIe~~i~~LA~p~aNILlPrPGfp~Y~----~~a~~~~lEVR~ydlLPe~~weIDL~~veal~DENT~AivviNP~NP 211 (447)
T KOG0259|consen 136 SQAIELAISSLANPGANILLPRPGFPLYD----TRAIYSGLEVRYYDLLPEKDWEIDLDGVEALADENTVAIVVINPNNP 211 (447)
T ss_pred hHHHHHHHHHhcCCCCceecCCCCCchHH----HhhhhcCceeEeecccCcccceechHHHHHhhccCeeEEEEeCCCCC
Confidence 79997 66678899999999999998885 5567889999999863 899999999999999999999999
Q ss_pred Cccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC----C----CCCCccEEEeccccccccCCCceEEEEEEcChh-
Q 016612 152 RQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P----LELGADIVMHSATKFIAGHSDVMAGVLAVKGER- 219 (386)
Q Consensus 152 tG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~----~----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~- 219 (386)
+|.++. +++|++.|+++++.+|.||+|..-.+.+ + ...-..+.++|.||.+-.| |+|.||++..++.
T Consensus 212 cGnVys~~HL~kiae~A~klgi~vIaDEVY~~~vfg~~pfvpmg~fssiVPVitlggisKrW~VP-GWRlGWi~~hD~~g 290 (447)
T KOG0259|consen 212 CGNVYSEDHLKKIAETAKKLGIMVIADEVYGHTVFGDKPFVPMGKFSSIVPVITLGGISKRWIVP-GWRLGWIALHDPRG 290 (447)
T ss_pred CcccccHHHHHHHHHHHHHhCCeEEehhhcceeecCCCCccchhhccccCceEeecccccccccC-CceeeeEEEecccc
Confidence 999985 8999999999999999999987544431 1 1123579999999988554 7899999988653
Q ss_pred H---HHHHHHhhhhcCC--CCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchh
Q 016612 220 L---AKELYFLQNAEGS--GLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 289 (386)
Q Consensus 220 ~---~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 289 (386)
+ ...+..+...... +....-+.++-.-++ .+..+..-+..++.-.-.. |+++|+..
T Consensus 291 vf~~~~~~q~~~~~~~~~~~p~TiiQ~AlP~IL~kTp~efF~k~~~~lk~na~l~y~~--------------Lk~IP~l~ 356 (447)
T KOG0259|consen 291 VFRDTKVVQGIKNFLDIIPGPATIIQGALPDILEKTPEEFFDKKLSFLKSNADLCYSR--------------LKDIPCLT 356 (447)
T ss_pred cccchHHHHHHHHHHhccCCccHhHHHHhHHHHHhChHHHHHHHHHHHHhhHHHHHHH--------------HhcCCCcc
Confidence 1 1111222222222 222222222211111 1122222233333333334 44444444
Q ss_pred hhhhccCCCCceEEEE-e---------CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCC
Q 016612 290 LHYSQAKGAGSVLSFL-T---------GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 359 (386)
Q Consensus 290 i~~~~~~~~~~~~~~~-~---------~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 359 (386)
...+ ..|.++.+. + ++.+++.++.++-. +.+-+|.++. .++
T Consensus 357 cp~k---Peg~mylmv~l~~s~~~~~~dD~dFc~kL~~Ees---v~~LPG~af~-----------------------~~n 407 (447)
T KOG0259|consen 357 CPVK---PEGCMYLMVKLNLSLFPDIEDDVDFCQKLAREES---VICLPGQAFG-----------------------LKN 407 (447)
T ss_pred cCcC---CCcceEEEeccchhhhccccccHHHHHHHhhhcc---eEEecccccc-----------------------CCC
Confidence 2222 234455443 1 44566666666644 4344555422 278
Q ss_pred eEEEEec--cCChHHHHHHHHHHHhc
Q 016612 360 LVRISVG--IEDVNDLISDLDKALRT 383 (386)
Q Consensus 360 ~iRis~~--~~~~~~~i~~l~~~l~~ 383 (386)
|+|++++ .+.+++..++|++.-.+
T Consensus 408 w~Ri~i~~~~~~leea~~Rik~Fc~R 433 (447)
T KOG0259|consen 408 WLRIVITVEEEMLEEAFSRIKEFCDR 433 (447)
T ss_pred eEEEEEccChHHHHHHHHHHHHHHHh
Confidence 9999996 47888888888876644
No 79
>PRK06348 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7e-27 Score=219.38 Aligned_cols=288 Identities=16% Similarity=0.176 Sum_probs=188.4
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
....|.+. |.+ +++++.+++.+.+|. ++.++++++++++. ++.+++++||.|++++|.|+.+. ..++..
T Consensus 58 ~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~----~~~~~~ 133 (384)
T PRK06348 58 GHTRYTDSGGDVELIEEIIKYYSKNYDLSFKRNEIMATVGACHGMYLALQSILDPGDEVIIHEPYFTPYK----DQIEMV 133 (384)
T ss_pred CCCCCCCCCCcHHHHHHHHHHHHHHhCCCCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHc
Confidence 34668877 776 788899888766543 24444444558987 45667899999999999999886 445567
Q ss_pred CcEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC--
Q 016612 118 GVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-- 185 (386)
Q Consensus 118 g~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~-- 185 (386)
|.+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|.++|+++|++||+||+|....+..
T Consensus 134 g~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~ 213 (384)
T PRK06348 134 GGKPIILETYEEDGFQINVKKLEALITSKTKAIILNSPNNPTGAVFSKETLEEIAKIAIEYDLFIISDEVYDGFSFYEDF 213 (384)
T ss_pred CCEEEEecCCcCcCCcCCHHHHHHhhCcCccEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCeEEEEecccccceeCCCc
Confidence 778877763 2789999988889999999999999999986 7889999999999999999987432210
Q ss_pred -C---CC--CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH----HHHH
Q 016612 186 -P---LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA----LRVE 255 (386)
Q Consensus 186 -~---~~--~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 255 (386)
+ .. .+.++++.|+||.+ +.+|+|+||++++ +.+.+.+...........+...+.++...+.... ....
T Consensus 214 ~~~~~~~~~~~~vi~~~SfSK~~-~l~GlRiG~~v~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 291 (384)
T PRK06348 214 VPMATLAGMPERTITFGSFSKDF-AMTGWRIGYVIAP-DYIIETAKIINEGICFSAPTISQRAAIYALKHRDTIVPLIKE 291 (384)
T ss_pred cchhhcCCCcCcEEEEecchhcc-CCccccceeeecC-HHHHHHHHHHHHhccCCCCHHHHHHHHHHHhCcHHHHHHHHH
Confidence 1 11 34679999999999 5457999999986 5566666655554444555655555544433211 1222
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCC-HHhHHHHHhhc-CcceeccCCCCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS-LALSKHVVETT-KYFSITVSFGSVK 332 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~l-~~~gi~~~~G~~~ 332 (386)
.+.++.+.+.+.+++.+ +..+. ...++ ++++.++. ......+.+.+ ...|+.+.+|..+
T Consensus 292 ~~~~r~~~~~~~L~~~~--------------~~~~~----~p~gg~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f 353 (384)
T PRK06348 292 EFQKRLEYAYKRIESIP--------------NLSLH----PPKGSIYAFINIKKTGLSSVEFCEKLLKEAHVLVIPGKAF 353 (384)
T ss_pred HHHHHHHHHHHHHhcCC--------------Cceec----cCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhh
Confidence 23333444444444321 11111 12334 45666642 22345556554 3568877777653
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 378 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 378 (386)
. ..++++||||++. +.+++.+.++
T Consensus 354 ~---------------------~~~~~~iRi~~~~-~~~~l~~al~ 377 (384)
T PRK06348 354 G---------------------ESGEGYIRLACTV-GIEVLEEAFN 377 (384)
T ss_pred c---------------------cCCCCeEEEEecC-CHHHHHHHHH
Confidence 2 0125789999974 4444444443
No 80
>PRK08960 hypothetical protein; Provisional
Probab=99.96 E-value=4.4e-27 Score=221.05 Aligned_cols=289 Identities=17% Similarity=0.126 Sum_probs=186.4
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC--C-ceEEeC-cHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA--D-RALCFT-SGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~~i~~~-~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
..|.+. |.+ +|+++.+++.+.+|. + +.|+++ ++++++.. +..++++||+|++++|+|+.+... ++..|.
T Consensus 63 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~p~y~~~~~~----~~~~g~ 138 (387)
T PRK08960 63 TRYTAARGLPALREAIAGFYAQRYGVDVDPERILVTPGGSGALLLASSLLVDPGKHWLLADPGYPCNRHF----LRLVEG 138 (387)
T ss_pred CccCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccCcHHHHHHHHHHhcCCCCEEEEcCCCCcchHHH----HHhcCC
Confidence 457666 776 788888888766543 2 344455 45699975 455789999999999999998643 445677
Q ss_pred EEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----C
Q 016612 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (386)
Q Consensus 120 ~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~ 185 (386)
+++.++.+ |++++++.++++++++++++|+||||.+.+ +++|+++|+++|+++|+||+|..-.+. .
T Consensus 139 ~~~~v~~~~~~~~~~d~~~l~~~~~~~~~~i~i~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~Y~~~~~~~~~~~ 218 (387)
T PRK08960 139 AAQLVPVGPDSRYQLTPALVERHWNADTVGALVASPANPTGTLLSRDELAALSQALRARGGHLVVDEIYHGLTYGVDAAS 218 (387)
T ss_pred eEEEEecCcccCCCCCHHHHHHHhCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 77766642 688999988888999999999999999987 567888899999999999998632221 1
Q ss_pred CCCC-CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC-----cHHHHHHHHHH
Q 016612 186 PLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQD 259 (386)
Q Consensus 186 ~~~~-~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~ 259 (386)
.... ...++++|+||.+ |.+|+|+||+++++ .+.+.+...........+...+.++...+. .+....+.+.+
T Consensus 219 ~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~~-~~~~~~~~~~~~~~~~~s~~~q~a~~~~l~~~~~~~l~~~~~~~~~ 296 (387)
T PRK08960 219 VLEVDDDAFVLNSFSKYF-GMTGWRLGWLVAPP-AAVPELEKLAQNLYISASTPAQHAALACFEPETLAILEARRAEFAR 296 (387)
T ss_pred hhhccCCEEEEeeccccc-CCcccEEEEEEcCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHhhcCcHHHHHHHHHHHHH
Confidence 1111 3568999999999 56689999999974 565556555544444455555554444332 12222334444
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhc-CcceeccCCCCccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVKSLISM 337 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l-~~~gi~~~~G~~~~~~~~ 337 (386)
+.+.+.+.|++.. + .+. ..+ ..+.++++.+++ ......+.+.+ ...|+.+.+|..+..
T Consensus 297 ~~~~l~~~L~~~~---------~------~~~-~~p-~g~~f~~~~~~~~~~~~~~~~~~ll~~~gi~v~pg~~f~~--- 356 (387)
T PRK08960 297 RRDFLLPALRELG---------F------GIA-VEP-QGAFYLYADISAFGGDAFAFCRHFLETEHVAFTPGLDFGR--- 356 (387)
T ss_pred HHHHHHHHHHhcC---------C------cCC-cCC-CeeEEEEEeccccCCCHHHHHHHHHHhCCEEEcCchHhCC---
Confidence 5555555555431 1 110 011 124556666643 12245566554 456888887765320
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHH
Q 016612 338 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDK 379 (386)
Q Consensus 338 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~ 379 (386)
+..++++||+++. +.+.+.+.+++
T Consensus 357 -----------------~~~~~~iRi~~~~-~~~~l~~al~~ 380 (387)
T PRK08960 357 -----------------HQAGQHVRFAYTQ-SLPRLQEAVER 380 (387)
T ss_pred -----------------CCCCCeEEEEecC-CHHHHHHHHHH
Confidence 0124689999986 45555555543
No 81
>PRK06855 aminotransferase; Validated
Probab=99.96 E-value=9.2e-27 Score=221.24 Aligned_cols=169 Identities=20% Similarity=0.277 Sum_probs=127.7
Q ss_pred CCCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcH-HHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 44 NGPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 44 ~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g-t~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...+.|.+. |.+ +|+++.+++.+.+|.+ +.|++++| ++++..++.++++||.|++++|+|+.+... .....
T Consensus 64 ~~~~~Y~~~~G~~~LReaia~~~~~~~g~~~~~~~I~it~G~~~al~~~~~l~~~Gd~Vlv~~P~Y~~~~~~---~~~~~ 140 (433)
T PRK06855 64 DKSYGYCPTKGVLETREFLAELNNKRGGAQITPDDIIFFNGLGDAIAKIYGLLRREARVIGPSPAYSTHSSA---EAAHA 140 (433)
T ss_pred CCCCCCCCCCCCHHHHHHHHHHHHhccCCCCCHhHEEEcCcHHHHHHHHHHhcCCCCeEEEeCCCCchHHHH---HHHhc
Confidence 345678887 887 8999999998876643 34555555 588986667889999999999999986421 12244
Q ss_pred CcEEEEeCC-------CCHHHHHhhhC--CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-
Q 016612 118 GVVVKRVNT-------CDLDEVASAIG--PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS- 184 (386)
Q Consensus 118 g~~~~~v~~-------~d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~- 184 (386)
|++++.++. .|++++++.+. ++++++++++|+||||.+++ +++|.++|+++|++||+||+|..-.+.
T Consensus 141 g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~~l~~~~ 220 (433)
T PRK06855 141 GYPPVTYRLDPENNWYPDLDDLENKVKYNPSIAGILLINPDNPTGAVYPKEILREIVDIAREYDLFIICDEIYNNIVYNG 220 (433)
T ss_pred CCeEEEEecccccCCCCCHHHHHHHHhcCCCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCC
Confidence 666666643 27899999886 46899999999999999986 678889999999999999998633221
Q ss_pred ----CC---CCCCccEEEeccccccccCCCceEEEEEEc
Q 016612 185 ----RP---LELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 185 ----~~---~~~~~di~~~S~sK~~~g~~g~~~G~i~~~ 216 (386)
.. ...+..|++.|+||.+ +.+|+|+||++++
T Consensus 221 ~~~~sl~~~~~~~~~I~~~S~SK~~-~~pGlRiG~ii~p 258 (433)
T PRK06855 221 KKTVPLSEVIGDVPGIALKGISKEL-PWPGSRCGWIEVY 258 (433)
T ss_pred CCCCCHHHHcCcCCeEEEecCcccc-CCCcceEEEEEEe
Confidence 11 1112459999999999 4458999999984
No 82
>COG0079 HisC Histidinol-phosphate/aromatic aminotransferase and cobyric acid decarboxylase [Amino acid transport and metabolism]
Probab=99.96 E-value=1.9e-27 Score=217.27 Aligned_cols=285 Identities=19% Similarity=0.243 Sum_probs=206.8
Q ss_pred CCCCchHHHHHHHHHhhcC-CC-ceEEeCcHH-HHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 51 RSGNPTRDALESLLAKLDK-AD-RALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 51 ~~g~~~~~~l~~~l~~~~g-~~-~~i~~~~gt-~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
++.++...++++.+++++| .+ +.|+++.|+ +.|.. +..++.+||.|+++.|+|..|. ..++..|.+++.++.
T Consensus 53 rYPd~~~~~l~~a~a~~~~~~~~~~V~~gnGsde~i~~l~~~~~~~gd~vl~~~Ptf~~Y~----~~a~~~g~~~~~v~~ 128 (356)
T COG0079 53 RYPDPDYRELRAALAEYYGVVDPENVLVGNGSDELIELLVRAFVEPGDTVLIPEPTFSMYE----IAAQLAGAEVVKVPL 128 (356)
T ss_pred cCCCCcHHHHHHHHHHHhCCCCcceEEEcCChHHHHHHHHHHhhcCCCEEEEcCCChHHHH----HHHHhcCCeEEEecc
Confidence 3334467788899999998 55 677778887 77875 4558899999999999999885 567789999999987
Q ss_pred ----CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCccCCC----CCCccEEEe
Q 016612 127 ----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLSRPL----ELGADIVMH 196 (386)
Q Consensus 127 ----~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~~~~----~~~~di~~~ 196 (386)
.|++.+.+.+.+++++|++++||||||...+.++|.+++... +.+||+||+|....-.+.. ...+.+++.
T Consensus 129 ~~~~~d~~~~~~~~~~~~~lv~i~nPNNPTG~~~~~~~l~~l~~~~~~~~~vVvDEAY~eF~~~~~~~l~~~~~nlivlR 208 (356)
T COG0079 129 KEFRLDLDAILAAIRDKTKLVFLCNPNNPTGTLLPREELRALLEALPEGGLVVIDEAYIEFSPESSLELLKYPPNLIVLR 208 (356)
T ss_pred cccccCHHHHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhcCCchhhhhccCCCCEEEEE
Confidence 478889888888999999999999999999888888777754 8899999998632222111 234579999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCC
Q 016612 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 197 S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
||||.| |.+|+|+||++++ +++.+.+...... .+++...+.++..+++.- ........+..+++.+.+++..
T Consensus 209 TfSKa~-gLAGlRlGy~ia~-~~~i~~l~~vr~p--~~v~~~a~~aa~aal~~~~~~~~~~~~~~~~r~rl~~~l~~~~- 283 (356)
T COG0079 209 TFSKAF-GLAGLRVGYAIAN-PELIAALNKVRPP--FNVSSPALAAAIAALRDADYLEESVERIREERERLYAALKALG- 283 (356)
T ss_pred ecHHhh-hcchhceeeccCC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 999999 7789999998876 5666666655543 355666666665555432 3333344444555555555442
Q ss_pred cceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
+.. ++ ++.++++.+.+++.. ...+.+.+..+|+.++.... .
T Consensus 284 ~~~-------------v~----pS~aNFvlv~~~~~~-~~~l~~~L~~~giivR~~~~-~-------------------- 324 (356)
T COG0079 284 LFG-------------VF----PSQANFVLVRVPDAE-AAALAEALLKKGILVRDCSS-V-------------------- 324 (356)
T ss_pred CCe-------------ec----CCCCcEEEEECCCcc-HHHHHHHHHHCCEEEEeCCC-C--------------------
Confidence 100 11 335788999887644 66788888888888775332 0
Q ss_pred cCCCCCeEEEEecc-CChHHHHHHHHHHHhcC
Q 016612 354 RGLTEDLVRISVGI-EDVNDLISDLDKALRTG 384 (386)
Q Consensus 354 ~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~ 384 (386)
+..++++||+++. ++.+.+++.|.+.++..
T Consensus 325 -~~~~~~lRitvgt~een~~ll~AL~~~~~~~ 355 (356)
T COG0079 325 -GLLPGYLRITVGTPEENDRLLAALREVLKGL 355 (356)
T ss_pred -CCCCCeEEEEeCCHHHHHHHHHHHHHHHhcc
Confidence 2346789999974 88899999999988653
No 83
>PRK08636 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=219.27 Aligned_cols=294 Identities=16% Similarity=0.134 Sum_probs=186.7
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC---c-eEEeCcHH-HHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD---R-ALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~-~i~~~~gt-~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
..+.|++. |.+ +|+++.+++.+.+|.+ + .|++++|+ +++.. +.+++++||.|++++|+|+.+. ..++.
T Consensus 63 ~~~~Y~~~~G~~~lR~~ia~~l~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~----~~~~~ 138 (403)
T PRK08636 63 KTHGYSVSKGIYKLRLAICNWYKRKYNVDLDPETEVVATMGSKEGYVHLVQAITNPGDVAIVPDPAYPIHS----QAFIL 138 (403)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEECCChHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHh
Confidence 45778887 886 8999999998876642 3 56666665 88874 5667899999999999999885 55667
Q ss_pred CCcEEEEeCCC-------CHH----HHHhhhC---CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCC
Q 016612 117 TGVVVKRVNTC-------DLD----EVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 117 ~g~~~~~v~~~-------d~~----~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~ 179 (386)
.|.+++.++.+ |++ .++++++ ++++++++++|+||||.+++ +++|.++|++|+++||+||+|+
T Consensus 139 ~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~i~~~~P~NPTG~~~s~~~~~~l~~~a~~~~~~II~De~Y~ 218 (403)
T PRK08636 139 AGGNVHKMPLEYNEDFELDEDQFFENLEKALRESSPKPKYVVVNFPHNPTTATVEKSFYERLVALAKKERFYIISDIAYA 218 (403)
T ss_pred cCCEEEEEeccccccCccChhhhhhHHHHHHhhccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEeccch
Confidence 88998887642 444 3455553 57899999999999999986 6889999999999999999986
Q ss_pred CCCcc-----CC--CC--CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-
Q 016612 180 SPVLS-----RP--LE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT- 249 (386)
Q Consensus 180 ~~~~~-----~~--~~--~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (386)
.-.+. .. .+ .+..++++|+||.+ |.+|+|+||++++ +++.+.+.........+.+...+.++...+..
T Consensus 219 ~l~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~GlRiG~iv~~-~~li~~~~~~~~~~~~~~~~~~q~~~~~~~~~~ 296 (403)
T PRK08636 219 DITFDGYKTPSILEVEGAKDVAVESYTLSKSY-NMAGWRVGFVVGN-KKLVGALKKIKSWLDYGMFTPIQVAATIALDGD 296 (403)
T ss_pred hhccCCCCCCChhcCCCccccEEEEEeccccc-CCccceeeeeeCC-HHHHHHHHHHHHHhcccCChHHHHHHHHHHhCc
Confidence 32211 11 11 13456789999999 5568999999986 45555554444332223333333333222211
Q ss_pred ---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH---HhHHHHHhh-cCcc
Q 016612 250 ---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVET-TKYF 322 (386)
Q Consensus 250 ---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~l~~~-l~~~ 322 (386)
+....+.+.++.+.+.+.|++. ++. +. . ...|.++++.+++. ....++.+. ++..
T Consensus 297 ~~~~~~~~~~~~~~~~~l~~~L~~~---------~~~------~~--~-p~~g~~~~~~l~~~~~~~~~~~l~~~ll~~~ 358 (403)
T PRK08636 297 QSCVEEIRETYRKRRDVLIESFANA---------GWE------LQ--K-PRASMFVWAKIPEPARHLGSLEFSKQLLTEA 358 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHC---------CCc------cc--C-CCcceEEEEECCCccCCCCHHHHHHHHHHhC
Confidence 1122233344444444554432 111 10 1 12356777777532 113445544 4456
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
|+.+.+|..+. +..++++||+++. +.+++.+++|+++++.
T Consensus 359 gV~v~pg~~f~---------------------~~~~~~iRi~~~~~~~~l~~~~~rl~~~l~~ 400 (403)
T PRK08636 359 KVAVSPGIGFG---------------------EYGDEYVRIALIENENRIRQAARNIKKFLKE 400 (403)
T ss_pred CEEEecchhhC---------------------cCCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 77777765421 1125789999983 5555566666666654
No 84
>PRK05764 aspartate aminotransferase; Provisional
Probab=99.96 E-value=7.3e-27 Score=220.32 Aligned_cols=291 Identities=21% Similarity=0.248 Sum_probs=195.3
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC--C--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA--D--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~--~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.+ +++++.+++.+.+|. + +.++++++++++.. +..++++||.|++++|+|+.+. .+++..|
T Consensus 61 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g 136 (393)
T PRK05764 61 KTKYTPAAGIPELREAIAAKLKRDNGLDYDPSQVIVTTGAKQALYNAFMALLDPGDEVIIPAPYWVSYP----EMVKLAG 136 (393)
T ss_pred CCCcCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEeCCcHHHHHHHHHHhcCCCCEEEecCCCCcchH----HHHHHcC
Confidence 3457766 654 778888877666553 2 45555555689874 4557899999999999998875 4556788
Q ss_pred cEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++.+ |++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++++|++|+...+.
T Consensus 137 ~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~ 216 (393)
T PRK05764 137 GVPVFVPTGEENGFKLTVEQLEAAITPKTKALILNSPSNPTGAVYSPEELEAIADVAVEHDIWVLSDEIYEKLVYDGAEF 216 (393)
T ss_pred CEEEEEecCcccCCcCCHHHHHHhhCccceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCcEEEEeccccceeeCCCCc
Confidence 998888763 578999999889999999999999999975 788999999999999999998643221
Q ss_pred -C-----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHH
Q 016612 185 -R-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRV 254 (386)
Q Consensus 185 -~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 254 (386)
. ....+.++++.|+||.+ +.+|+|+||++++ +++.+.+...........+...++++...+.. +....
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~ 294 (393)
T PRK05764 217 TSIASLSPELRDRTITVNGFSKAY-AMTGWRLGYAAGP-KELIKAMSKLQSHSTSNPTSIAQYAAVAALNGPQDEVEEMR 294 (393)
T ss_pred ccHHHcCCCCcCCEEEEecCcccc-cCccceeEEEecC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHcCChHHHHHHH
Confidence 0 11235789999999999 5568999999976 55666666555544556666666665555431 11222
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC-ceEEEEeCCHH-----hHHHHHhhc-CcceeccC
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLA-----LSKHVVETT-KYFSITVS 327 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~-----~~~~l~~~l-~~~gi~~~ 327 (386)
+.+.++.+.+.+.+++. +++.+. ...+ .++++.+.... ...++.+.+ +..|+.+.
T Consensus 295 ~~~~~~~~~l~~~L~~~--------------~g~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~ 356 (393)
T PRK05764 295 QAFEERRDLMVDGLNEI--------------PGLECP----KPEGAFYVFPNVSKLLGKSITDSLEFAEALLEEAGVAVV 356 (393)
T ss_pred HHHHHHHHHHHHHHhhC--------------CCCccc----CCCcceEEEEecccccccccCCHHHHHHHHHHhCCEEEc
Confidence 23333444444444433 222222 1223 34555554321 124555444 45688777
Q ss_pred CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 328 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
+|..+. .+++||||++. +++++.+++|.++++.
T Consensus 357 ~g~~f~-----------------------~~~~vRis~~~~~~~~~~~i~~l~~~~~~ 391 (393)
T PRK05764 357 PGIAFG-----------------------APGYVRLSYATSLEDLEEGLERIERFLES 391 (393)
T ss_pred cccccC-----------------------CCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 765421 14679999974 7788888888887764
No 85
>PLN02607 1-aminocyclopropane-1-carboxylate synthase
Probab=99.96 E-value=2.4e-26 Score=218.02 Aligned_cols=292 Identities=15% Similarity=0.168 Sum_probs=191.9
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
..|... |.+ +|+++.+++.+.+|. + +.|++++| ++++.. +..+++|||.|+++.|.|+++...+ ....
T Consensus 89 ~~y~~~~G~~~LR~aiA~~l~~~~~~~~~v~p~~Ivit~G~t~al~~l~~~l~~pGD~Vlv~~P~Y~~f~~~~---~~~~ 165 (447)
T PLN02607 89 ALFQDYHGLKSFRQAMASFMEQIRGGKARFDPDRIVLTAGATAANELLTFILADPGDALLVPTPYYPGFDRDL---RWRT 165 (447)
T ss_pred hccCCCcchHHHHHHHHHHHHHhcCCCCCcCHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCcchHHHH---HhcC
Confidence 346666 876 899999999987662 2 45556666 588874 4557899999999999999886322 2357
Q ss_pred CcEEEEeCCC-------CHHHHHhhhC------CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 118 GVVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
|++++.++.+ |++++++++. .+++++++++|+||||.+++ +++|.++|+++++++|+||+|+..
T Consensus 166 g~~vv~v~~~~~~~f~~~~~~le~a~~~a~~~~~~vk~lll~nP~NPtG~~~s~e~l~~l~~~~~~~~i~lI~DEiYa~~ 245 (447)
T PLN02607 166 GVKIVPIHCDSSNNFQVTPQALEAAYQEAEAANIRVRGVLITNPSNPLGATVQRSVLEDILDFVVRKNIHLVSDEIYSGS 245 (447)
T ss_pred CcEEEEEeCCCCCCCcCCHHHHHHHHHHHHHhCCCeeEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 8888887653 6788888775 37899999999999999997 788999999999999999998753
Q ss_pred Ccc-----CCC---------C-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhc
Q 016612 182 VLS-----RPL---------E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (386)
Q Consensus 182 ~~~-----~~~---------~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (386)
.+. +.. . .+..+++.|+||.| |.+|+|+||+++.++.+.+.+...... ...+...+.++...
T Consensus 246 ~f~~~~f~S~~s~~~~~~~~~~~~~v~vi~s~SK~f-g~~GlRvG~ivs~n~~l~~~~~~~~~~--~~~s~~~q~~~~~~ 322 (447)
T PLN02607 246 VFSASEFVSVAEIVEARGYKGVAERVHIVYSLSKDL-GLPGFRVGTIYSYNDKVVTTARRMSSF--TLVSSQTQHLLASM 322 (447)
T ss_pred ccCCCCcccHHHHHhhcCCCCCcCcEEEEEcchhcC-CCCcceEEEEEEcCHHHHHHHHHHhhc--CCCCHHHHHHHHHH
Confidence 321 110 1 23568899999999 556899999998666665544443322 23344455554444
Q ss_pred CCcH-------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH------HhHH
Q 016612 247 VKTM-------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ALSK 313 (386)
Q Consensus 247 ~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~~ 313 (386)
+..- ....+++.+..+.+.+.|++. +++-. . ...|.++|+.++.. +...
T Consensus 323 L~d~~~~~~~l~~~r~~l~~~~~~~~~~L~~~---------gi~~~--------~-~~ag~fvw~~L~~~~~~~~~~~e~ 384 (447)
T PLN02607 323 LSDEEFTENYIRTNRERLRKRYEMIVQGLRRA---------GIECL--------K-GNAGLFCWMNLSPLLETPTREGEL 384 (447)
T ss_pred hCCchhHHHHHHHHHHHHHHHHHHHHHHHHhC---------CCCcc--------c-CCeeEEEEEEchHhhcCCCchhHH
Confidence 4321 122233334444444555532 11111 1 12356667766421 1123
Q ss_pred HHHhhc-CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 314 HVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 314 ~l~~~l-~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
++.+.+ ...|+.+.+|..+. +..++|+||+++. +.+++.+++|.+++++
T Consensus 385 ~l~~~ll~~~gV~v~pG~~f~---------------------~~~~g~fRi~fa~~~~~~l~~gl~Ri~~~l~~ 437 (447)
T PLN02607 385 ALWDSILREVKLNISPGSSCH---------------------CSEPGWFRVCFANMSEDTLEVALKRIHRFMDR 437 (447)
T ss_pred HHHHHHHHhCCEEEcCccccC---------------------CCCCCEEEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 555444 34678777876521 1147899999984 6677778888877754
No 86
>COG1104 NifS Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes [Amino acid transport and metabolism]
Probab=99.96 E-value=4e-27 Score=210.59 Aligned_cols=298 Identities=22% Similarity=0.230 Sum_probs=203.5
Q ss_pred hHHHHHHHHHhhcCCC-ceEEe-CcHHHHHH-HHHH--h--c--CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 56 TRDALESLLAKLDKAD-RALCF-TSGMAALA-AVTH--L--L--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~-~~gt~al~-~~~~--~--~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
..++.+++++++.|++ +.|++ ++||++.+ ++.. . . ++|.+++++.-+|+++...++.. +..|.++.+++.
T Consensus 45 ~ve~AR~~iA~llga~~~eIiFTSG~TEsnNlaI~g~~~a~~~~~~~~HIIts~iEH~aVl~~~~~L-e~~g~~Vtyl~V 123 (386)
T COG1104 45 AVEEAREQIAKLLGADPEEIIFTSGATESNNLAIKGAALAYRNAQKGKHIITSAIEHPAVLNTCRYL-ERQGFEVTYLPV 123 (386)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEecCCcHHHHHHHHhhHHhhhcccCCCeEEEcccccHHHHHHHHHH-HhcCCeEEEeCC
Confidence 6788899999999987 45555 55578876 5554 1 1 25889999999999998887665 788999999997
Q ss_pred C-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccc
Q 016612 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (386)
Q Consensus 127 ~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK 200 (386)
+ |+++|+++++++|.+|.+.+.||.+|.+.|+++|.++|+++++++++|.+++.|.++ +....+.|++.+|.||
T Consensus 124 ~~~G~v~~e~L~~al~~~T~LVSim~aNnE~G~IQpI~ei~~i~k~~~i~fHvDAvQa~Gkipi~~~~~~vD~ls~SaHK 203 (386)
T COG1104 124 DSNGLVDLEQLEEALRPDTILVSIMHANNETGTIQPIAEIGEICKERGILFHVDAVQAVGKIPIDLEELGVDLLSFSAHK 203 (386)
T ss_pred CCCCeEcHHHHHHhcCCCceEEEEEecccCeeecccHHHHHHHHHHcCCeEEEehhhhcCceeccccccCcceEEeehhh
Confidence 6 899999999999999999999999999999999999999999999999999999876 3444589999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhhhhcC------CC-CChhhHHHHHhcCC----cHHHHHHHHHHHHHHHHHHHh
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEG------SG-LAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLA 269 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~ 269 (386)
+. ||.| +|+++.++..- +.++...++ ++ .+-+....+..+++ .+.....+.....+.+.+.+.
T Consensus 204 ~~-GpkG--iGaLyv~~~~~---~~p~i~GGgQE~g~RsGTenv~~Ivg~~~A~~~a~~~~~~~~~~~~~lr~~l~~~l~ 277 (386)
T COG1104 204 FG-GPKG--IGALYVRPGVR---LEPLIHGGGQERGLRSGTENVPGIVGFGKAAEIAVEELEEENARLRKLRDRLEDGLL 277 (386)
T ss_pred cc-CCCc--eEEEEECCCCc---cCceeccCcCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 97 8898 79988864321 222222221 11 11112222222222 222222223333333333333
Q ss_pred hCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHH
Q 016612 270 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 349 (386)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~ 349 (386)
+.. |...+.........+++.+.+++.+ .+.++..|...||.++.|++++--.. -+..
T Consensus 278 ~~~-------------p~~~~~g~~~~rlP~~~~~~f~gv~-gE~ll~~L~~~gI~vStGSACsS~~~--------~pSh 335 (386)
T COG1104 278 EII-------------PDVYLNGDDEPRLPNILNFSFPGVE-GESLLLALDLAGIAVSTGSACSSGSL--------EPSH 335 (386)
T ss_pred hcC-------------CcEEEcCCcccCCCCeEEEEeCCCc-HHHHHHhccccCeEEeccccccCCCC--------CccH
Confidence 321 1222222211223566778887755 88899999999999999987442111 1334
Q ss_pred HHHhcCCC----CCeEEEEeccCChHHHHHHHHHHHh
Q 016612 350 VRQARGLT----EDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 350 ~~~~~~~~----~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
++.++|.+ .+.||+|++..++++.++.+.++|+
T Consensus 336 VL~AmG~~~e~a~~siR~S~g~~tt~eei~~~~~~l~ 372 (386)
T COG1104 336 VLRAMGISEELAHGSIRFSLGRFTTEEEIDAAAEALK 372 (386)
T ss_pred HHHHcCCChHHhCccEEEEcCCCCCHHHHHHHHHHHH
Confidence 55666664 3889999997655555555555543
No 87
>PRK07550 hypothetical protein; Provisional
Probab=99.96 E-value=1.6e-26 Score=217.32 Aligned_cols=280 Identities=18% Similarity=0.164 Sum_probs=188.4
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
....|.+. |.+ +++++.+++.+..|.. +.|++++| ++++.. +.+++++||.|++++|.|+.+. .+++..
T Consensus 59 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~ 134 (386)
T PRK07550 59 AAHLYGPVEGLPELREAYAAHYSRLYGAAISPEQVHITSGCNQAFWAAMVTLAGAGDEVILPLPWYFNHK----MWLDML 134 (386)
T ss_pred CCcCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHhc
Confidence 34568776 887 7889999988776642 45656666 588874 4557899999999999998885 455688
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
|.+++.++.+ |++++++.++++++++++++|+||||.+.+ +++|.++|+++|++||+|++|+.....
T Consensus 135 g~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~i~~~~~~~~~~iI~Dd~y~~~~~~~~~ 214 (386)
T PRK07550 135 GIRPVYLPCDEGPGLLPDPAAAEALITPRTRAIALVTPNNPTGVVYPPELLHELYDLARRHGIALILDETYRDFDSGGGA 214 (386)
T ss_pred CCEEEEEecCCCcCCCCCHHHHHHHhcccCcEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCeEEEEeccchhhccCCCC
Confidence 9999888863 678899999889999999999999999986 789999999999999999998632110
Q ss_pred --CCC---C-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHH----H
Q 016612 185 --RPL---E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALR----V 254 (386)
Q Consensus 185 --~~~---~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~ 254 (386)
... . ....+++.|+||.+ |.+|+|+||+++++ ++.+.+...........+...+.++...+..+... .
T Consensus 215 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~i~~~~-~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~ 292 (386)
T PRK07550 215 PHDLFADPDWDDTLVHLYSFSKSY-ALTGHRVGAVVASP-ARIAEIEKFMDTVAICAPRIGQIAVAWGLPNLADWRAGNR 292 (386)
T ss_pred CcchhhCCCccccEEEEecchhhc-cCcccceEeeecCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHhccHHHHHHHHH
Confidence 111 1 13468899999999 55578999999874 45555555544444445555666555555443222 2
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhc-CcceeccCCCCcc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETT-KYFSITVSFGSVK 332 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l-~~~gi~~~~G~~~ 332 (386)
+.+.++.+.+.+.+++.. ++.+ . ...+.++++.++. .....++.+.+ +..|+.+.+|..+
T Consensus 293 ~~~~~~~~~l~~~L~~~~--------------~~~~---~-~~g~~~~~~~~~~~~~~~~~l~~~l~~~~gv~v~pg~~f 354 (386)
T PRK07550 293 AEIARRRDAFRAVFARLP--------------GWEL---L-ASGAYFAYVRHPFPDRPSREVARRLAKEAGILCLPGTMF 354 (386)
T ss_pred HHHHHHHHHHHHHHHhCC--------------Ccee---C-CCceEEEEecCCCCCCCHHHHHHHHHHhcCEEEeCchhh
Confidence 223344444445554331 1111 1 1124566666653 33456676664 4568888877653
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCC
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 369 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 369 (386)
. ...++++||+++..+
T Consensus 355 ~---------------------~~~~~~iRis~~~~~ 370 (386)
T PRK07550 355 G---------------------PGQEGYLRLAFANAD 370 (386)
T ss_pred C---------------------CCCCCEEEEEeecCC
Confidence 1 012568999998543
No 88
>PRK09295 bifunctional cysteine desulfurase/selenocysteine lyase; Validated
Probab=99.96 E-value=7e-27 Score=221.08 Aligned_cols=296 Identities=17% Similarity=0.206 Sum_probs=196.0
Q ss_pred hHHHHHHHHHhhcCC-C-ceEEeCcH-HHHHHHHHH-----hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKA-D-RALCFTSG-MAALAAVTH-----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~-~-~~i~~~~g-t~al~~~~~-----~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
..+++++.+++++|. + +.+++++| |++++.+.. .+++||+|++++++|++....|...++..|++++.++.+
T Consensus 68 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~~l~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 147 (406)
T PRK09295 68 KMENVRKQAALFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISEMEHHANIVPWQMLCARVGAELRVIPLN 147 (406)
T ss_pred HHHHHHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecC
Confidence 577888999999986 3 45555555 588875433 468999999999999988767777778889999988753
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++++++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+... +....++|++++|+||+
T Consensus 148 ~~~~~d~~~l~~~i~~~t~lv~l~~~~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~ 227 (406)
T PRK09295 148 PDGTLQLETLPALFDERTRLLAITHVSNVLGTENPLAEMIALAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHKL 227 (406)
T ss_pred CCCCCCHHHHHHhcCCCcEEEEEecchhcccccCCHHHHHHHHHHcCCEEEEEcccccCccccCchhcCCCEEEeehhhc
Confidence 789999999999999999999999999999999999999999999999999887754 33356899999999996
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhh---------------------cCCC-CChhhHHHHHhcCCcHHH-HHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA---------------------EGSG-LAPFDCWICLRGVKTMAL-RVEKQQ 258 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~---------------------~~~~-~~~~~~~~~~~~~~~~~~-~~~~~~ 258 (386)
+ ||.| .|+++++++ +.+.+...... ...+ .+......+..+++.+.. -.+...
T Consensus 228 ~-gp~G--~G~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~ 303 (406)
T PRK09295 228 Y-GPTG--IGILYVKEA-LLQEMPPWEGGGSMIATVSLTEGTTWAKAPWRFEAGTPNTGGIIGLGAALDYVSALGLNNIA 303 (406)
T ss_pred c-CCCC--cEEEEEchH-hHhhCCCcccCCceeeeeecCCccccCCchhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHH
Confidence 6 7777 699998754 33322211100 0111 111222222223322211 122233
Q ss_pred HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccc
Q 016612 259 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMP 338 (386)
Q Consensus 259 ~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p 338 (386)
++.+.+.+++.+ ++..++++.++.+ ..+.++++|.++... .+.+.+.+...||.++.|..+. .+
T Consensus 304 ~~~~~l~~~l~~----------~l~~~~~~~~~~~--~~~~~iv~~~~~~~~-~~~~~~~L~~~gI~v~~g~~c~---~~ 367 (406)
T PRK09295 304 EYEQNLMHYALS----------QLESVPDLTLYGP--QNRLGVIAFNLGKHH-AYDVGSFLDNYGIAVRTGHHCA---MP 367 (406)
T ss_pred HHHHHHHHHHHH----------HHhcCCCEEEeCC--CCCceEEEEEECCcC-HHHHHHHHHhCCeEEeccccch---HH
Confidence 333334433332 1222233333322 124678999886532 4556667777888888776522 11
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.....+. ++++|+|++..++++.++.+.++|++
T Consensus 368 -----------~~~~~~~-~~~iRiS~~~ynt~~did~l~~~l~~ 400 (406)
T PRK09295 368 -----------LMAYYNV-PAMCRASLAMYNTHEEVDRLVAGLQR 400 (406)
T ss_pred -----------HHHHHCC-CCEEEEEccCCCCHHHHHHHHHHHHH
Confidence 0111222 36799999987777777777766654
No 89
>PRK06225 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.1e-26 Score=217.96 Aligned_cols=285 Identities=20% Similarity=0.197 Sum_probs=188.8
Q ss_pred HHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-------
Q 016612 57 RDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------- 126 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------- 126 (386)
..++++.+++++|.+ +.++++++++++.. +.+++.+||.|++++|.|..+. ..++..|.+++.++.
T Consensus 68 ~~~lr~~ia~~l~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~ 143 (380)
T PRK06225 68 FPELRELILKDLGLDDDEALITAGATESLYLVMRAFLSPGDNAVTPDPGYLIID----NFASRFGAEVIEVPIYSEECNY 143 (380)
T ss_pred hHHHHHHHHHhcCCCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCCCcchH----HHHHHhCceEEeeccccccCCc
Confidence 556777788887765 46666666799875 4557889999999999998764 455678888887764
Q ss_pred -CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC---CCcc-CCCCCCccEEEecc
Q 016612 127 -CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS---PVLS-RPLELGADIVMHSA 198 (386)
Q Consensus 127 -~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~---~~~~-~~~~~~~di~~~S~ 198 (386)
.|++++++.++++++++++++|+||||.+++ +++|.++|+++|+++|+|++|.. +... .....+.++++.|+
T Consensus 144 ~~d~~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~i~~~s~ 223 (380)
T PRK06225 144 KLTPELVKENMDENTRLIYLIDPLNPLGSSYTEEEIKEFAEIARDNDAFLLHDCTYRDFAREHTLAAEYAPEHTVTSYSF 223 (380)
T ss_pred cCCHHHHHhhcCCCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCcEEEEehhHHHHhccCCchhhcCCCCEEEEeec
Confidence 2788999998889999999999999999975 88999999999999999999742 1111 11122567899999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHH-HHHHHHHHHHHHHHhhCCCc
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRV-EKQQDNAQKIAEFLASHPRV 274 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-~~~~~~~~~l~~~l~~~~~~ 274 (386)
||++ |++|+|+||++++ +.+.+.+..... ...+.+...+.++...+.. +..+. ....++.+.+.+.+++.+
T Consensus 224 SK~~-g~~G~RiG~i~~~-~~l~~~~~~~~~-~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-- 298 (380)
T PRK06225 224 SKIF-GMAGLRIGAVVAT-PDLIEVVKSIVI-NDLGTNVIAQEAAIAGLKVKDEWIDRIRRTTFKNQKLIKEAVDEIE-- 298 (380)
T ss_pred hhhc-CCccceeEEEecC-HHHHHHHHHHHh-cccCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCc--
Confidence 9999 6678999999987 456555554432 1233444444444333322 11111 112223333344444322
Q ss_pred ceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 275 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 275 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
+..+. .. +..++++++.+.. ......+.+.+...|+.+.+|..+. +
T Consensus 299 ------------~~~~~-~~-~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~g~~~~----~--------------- 345 (380)
T PRK06225 299 ------------GVFLP-VY-PSHGNMMVIDISEAGIDPEDLVEYLLERKIFVRQGTYTS----K--------------- 345 (380)
T ss_pred ------------CCccc-cC-CCCCeEEEEEcccccCCHHHHHHHHHHCCEEEcCCcccC----c---------------
Confidence 11110 01 2246678887743 2235667777777788877765311 0
Q ss_pred cCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 354 RGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 354 ~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
..+++++|+|++. ++++++++.|++++++.
T Consensus 346 -~~~~~~iR~s~~~~~e~l~~~~~~l~~~~~~~ 377 (380)
T PRK06225 346 -RFGDRYIRVSFSIPREQVEVFCEEFPDVVETL 377 (380)
T ss_pred -CCCCceEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 1135689999985 68889999998888653
No 90
>PRK06107 aspartate aminotransferase; Provisional
Probab=99.96 E-value=1.8e-26 Score=217.73 Aligned_cols=293 Identities=16% Similarity=0.188 Sum_probs=194.0
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|.+. |.+ +|+++++++++.+|.+ +.+++++| ++|+.. +..++++||.|++++|.|+.+... +...+
T Consensus 63 ~~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vl~~~p~y~~y~~~----~~~~~ 138 (402)
T PRK06107 63 ETKYTLVNGTPALRKAIIAKLERRNGLHYADNEITVGGGAKQAIFLALMATLEAGDEVIIPAPYWVSYPDM----VLAND 138 (402)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhcCCCCEEEEecCCCcCHHHH----HHHcC
Confidence 4568887 886 8999999999887763 34555555 589874 455789999999999999888633 33445
Q ss_pred cEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHc-CCEEEEeCCCCCCCc----
Q 016612 119 VVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAH-GALLLVDNSIMSPVL---- 183 (386)
Q Consensus 119 ~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~-~~~li~D~a~~~~~~---- 183 (386)
...+.++. .|++++++.+.++++++++++|+||||.+.+ +++|+++|+++ ++++|+||+|+.-.+
T Consensus 139 ~~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~~iI~De~y~~l~~~~~~ 218 (402)
T PRK06107 139 GTPVIVACPEEQGFKLTPEALEAAITPRTRWLILNAPSNPTGAVYSRAELRALADVLLRHPHVLVLTDDIYDHIRFDDEP 218 (402)
T ss_pred CEEEEecCCcccCCCCCHHHHHhhcCcCceEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCeEEEEehhccccccCCCC
Confidence 55555553 2578899988888999999999999999986 67788889998 999999999863211
Q ss_pred -cCCC-----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHH
Q 016612 184 -SRPL-----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALR 253 (386)
Q Consensus 184 -~~~~-----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 253 (386)
.... ..+..++++|+||.+ +.+|+|+||++++ +++.+.+...........+...+.++...+.. +...
T Consensus 219 ~~~~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~~~~-~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~ 296 (402)
T PRK06107 219 TPHLLAAAPELRDRVLVTNGVSKTY-AMTGWRIGYAAGP-ADLIAAINKLQSQSSSCPSSISQAAAAAALNGDQSFVTES 296 (402)
T ss_pred CCCHHHhCcCccCCEEEEeccchhh-cCcccceeeeecC-HHHHHHHHHHHHhcccCCChHHHHHHHHHhcCChHHHHHH
Confidence 1111 124679999999999 5568999999986 55666666666555555666666666554431 2222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--------H---HhHHHHH-hhcCc
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------L---ALSKHVV-ETTKY 321 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------~---~~~~~l~-~~l~~ 321 (386)
.+.+.++.+.+.+.|++. +++.+. .+. .+.++|+.++. . .....+. ..++.
T Consensus 297 ~~~~~~~~~~~~~~L~~~--------------~g~~~~--~p~-gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 359 (402)
T PRK06107 297 VAVYKQRRDYALALLNAI--------------PGLSCL--VPD-GAFYLYVNCAGLIGKTTPEGKVLETDQDVVLYLLDS 359 (402)
T ss_pred HHHHHHHHHHHHHHHhcC--------------CCCccc--CCC-cceEEeeecccccccccccccCCCCHHHHHHHHHHh
Confidence 333444444455555432 122221 111 23444555421 0 1223333 34455
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
.|+.+.+|..+. .++++|||++. +++++.++.|.+.++++
T Consensus 360 ~gv~v~pg~~Fg-----------------------~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 401 (402)
T PRK06107 360 AGVAVVQGTAYG-----------------------LSPYFRLSIATSLETLEEACARIERAVAAL 401 (402)
T ss_pred CCEEEeCccccC-----------------------CCCeEEEEeCCCHHHHHHHHHHHHHHHHhc
Confidence 678777776521 14679999985 66777788888777653
No 91
>TIGR01822 2am3keto_CoA 2-amino-3-ketobutyrate coenzyme A ligase. This model represents a narrowly defined clade of animal and bacterial (almost exclusively Proteobacterial) 2-amino-3-ketobutyrate--CoA ligase. This enzyme can act in threonine catabolism. The closest homolog from Bacillus subtilis, and sequences like it, may be functionally equivalent but were not included in the model because of difficulty in finding reports of function.
Probab=99.96 E-value=1.5e-26 Score=218.28 Aligned_cols=323 Identities=15% Similarity=0.177 Sum_probs=206.8
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCcccc--CC--CC-chHHHHHHHHHhhcCCCceEEeCcHHHHHHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYT--RS--GN-PTRDALESLLAKLDKADRALCFTSGMAALAA 85 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~--~~--g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~ 85 (386)
...++++ +++|+|..++|......... .. ....+|+ +. |. +...++++.+++++|.++.+++++|++|+.+
T Consensus 38 ~~~i~~~-~~~~lg~~~~~~v~~~~~~~--~~-~~~~~~~~s~~~~G~~~~~~~le~~ia~~~g~~~~ii~~~~~~a~~~ 113 (393)
T TIGR01822 38 REVLNFC-ANNYLGLSSHPDLIQAAKDA--LD-EHGFGMSSVRFICGTQDIHKELEAKIAAFLGTEDTILYASCFDANGG 113 (393)
T ss_pred ceEEEee-CCCccccCCCHHHHHHHHHH--HH-HhCCCCCCcCcccCChHHHHHHHHHHHHHhCCCcEEEECchHHHHHH
Confidence 3578999 77888877666443211111 11 1112222 21 53 4789999999999999999999999988874
Q ss_pred -HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC------CceEEEEeCCCCCCcccccH
Q 016612 86 -VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 86 -~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l 158 (386)
+.+++++||+|+++++.|+++...+ +..+.+...+...|++++++.+++ ++++|++++++||+|.+.|+
T Consensus 114 ~~~~l~~~gd~vi~~~~~~~s~~~~~----~~~~~~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~v~~~tG~~~~l 189 (393)
T TIGR01822 114 LFETLLGAEDAIISDALNHASIIDGV----RLCKAKRYRYANNDMADLEAQLKEARAAGARHRLIATDGVFSMDGVIAPL 189 (393)
T ss_pred HHHHhCCCCCEEEEeccccHHHHHHH----HhcCCceEEeCCCCHHHHHHHHHhhhhcCCCceEEEEeCCccCCCCcCCH
Confidence 4567899999999999999886543 233344445556789999888763 78899999999999999999
Q ss_pred HHHHHHHHHcCCEEEEeCCCCCCCccC---------CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh
Q 016612 159 RKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~a~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~ 229 (386)
++|.++|++||+++|+|++|+.+.... ....+.|++++|+||+++| .|+||++++ +.+.+.+.....
T Consensus 190 ~~i~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~di~~~s~sK~l~g---~r~G~~~~~-~~~~~~l~~~~~ 265 (393)
T TIGR01822 190 DEICDLADKYDALVMVDECHATGFLGPTGRGSHELCGVMGRVDIITGTLGKALGG---ASGGFTTAR-KEVVELLRQRSR 265 (393)
T ss_pred HHHHHHHHHcCCEEEEECCccccCcCCCCCchHHhcCCCCCCeEEEEEChHHhhC---CCcEEEEeC-HHHHHHHHHhCc
Confidence 999999999999999999997654321 1112578999999999864 368999886 455554543221
Q ss_pred --hcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE
Q 016612 230 --AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 304 (386)
Q Consensus 230 --~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~ 304 (386)
......++....++..+++. .....+++.++.+.+.+.+++. ++. +. ...++++.+
T Consensus 266 ~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~---------g~~------~~----~~~~~~~~i 326 (393)
T TIGR01822 266 PYLFSNSLPPAVVGASIKVLEMLEASNELRDRLWANTRYFRERMEAA---------GFD------IK----PADHPIIPV 326 (393)
T ss_pred cceecCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc---------CCC------CC----CCCCCEEEE
Confidence 12222333333333333222 1223344455555555555432 111 11 112456777
Q ss_pred EeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 016612 305 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 380 (386)
Q Consensus 305 ~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 380 (386)
.+.+......+.+.+...|+.+. +..+ |.. +.+...+|+|++. ++++++++.|+++
T Consensus 327 ~~~~~~~~~~l~~~L~~~gI~v~-~~~~-----~~~--------------~~~~~~iRis~~~~~t~edi~~~~~~l~~~ 386 (393)
T TIGR01822 327 MLYDAVLAQRFARRLLEEGIYVT-GFFY-----PVV--------------PKGQARIRVQISAAHTEEQLDRAVEAFTRI 386 (393)
T ss_pred EeCCHHHHHHHHHHHHHCCeeEe-eeCC-----CCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHH
Confidence 66554456677777777787665 3221 100 0123459999864 6777777777776
Q ss_pred HhcC
Q 016612 381 LRTG 384 (386)
Q Consensus 381 l~~~ 384 (386)
+++.
T Consensus 387 ~~~~ 390 (393)
T TIGR01822 387 GREL 390 (393)
T ss_pred HHHh
Confidence 6554
No 92
>TIGR01265 tyr_nico_aTase tyrosine/nicotianamine aminotransferases. This subfamily of pyridoxal phosphate-dependent enzymes includes known examples of both tyrosine aminotransferase from animals and nicotianamine aminotransferase from barley.
Probab=99.96 E-value=2.7e-26 Score=216.65 Aligned_cols=291 Identities=18% Similarity=0.140 Sum_probs=186.2
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
..|.+. |.+ +++++.+.+....+. ++.++++++++++.+ +.+++++||+|++++|+|+.+. ..++..|.
T Consensus 67 ~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~ii~t~G~t~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~ 142 (403)
T TIGR01265 67 NGYAPSVGALAAREAVAEYLSSDLPGKLTADDVVLTSGCSQAIEICIEALANPGANILVPRPGFPLYD----TRAAFSGL 142 (403)
T ss_pred CCCCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHcCC
Confidence 457655 655 567777666654332 356666666799874 4557799999999999998774 45567888
Q ss_pred EEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----
Q 016612 120 VVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----- 184 (386)
Q Consensus 120 ~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----- 184 (386)
+++.++. .|++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 143 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~ 222 (403)
T TIGR01265 143 EVRLYDLLPEKDWEIDLDGLEALADEKTVAIVVINPSNPCGSVFSRDHLQKIAEVARKLGIPIIADEIYGHMVFGDAPFI 222 (403)
T ss_pred EEEEecCCcccCCccCHHHHHHHhCcCccEEEEecCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEccccccccCCCCcc
Confidence 8887764 2688999988889999999999999999986 889999999999999999998743221
Q ss_pred CCC---CCCccEEEeccccccccCCCceEEEEEEcCh-h-----HHHHHHHhhhhcCCCCChhhHHHHHhcCC-----cH
Q 016612 185 RPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGE-R-----LAKELYFLQNAEGSGLAPFDCWICLRGVK-----TM 250 (386)
Q Consensus 185 ~~~---~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 250 (386)
... .....++++|+||.++ .+|+|+||+++.++ . +.+.+..... ...+.+...+.++...+. .+
T Consensus 223 ~~~~~~~~~~vi~~~S~SK~~~-~pGlRiG~~v~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~~~~~~l~~~~~~~~ 300 (403)
T TIGR01265 223 PMASFASIVPVLSLGGISKRWV-VPGWRLGWIIIHDPHGIFRDTVLQGLKNLLQ-RILGPATIVQGALPDILENTPQEFF 300 (403)
T ss_pred chhhhccCCcEEEEeecccccC-CCcceEEEEEEeCchhhhHHHHHHHHHHHhh-hhcCCChHHHHHHHHHHHhChHHHH
Confidence 111 1124689999999984 45899999998532 2 2222222221 122344455544433332 12
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----HhHHHHHhh-cCccee
Q 016612 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVET-TKYFSI 324 (386)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~-l~~~gi 324 (386)
....+++.++.+.+.+.++..+ +..+. . +..|.++++.++.. .....+.+. +...|+
T Consensus 301 ~~~~~~~~~~~~~l~~~L~~~~--------------~~~~~--~-p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gv 363 (403)
T TIGR01265 301 DGKISVLKSNAELCYEELKDIP--------------GLVCP--K-PEGAMYLMVKLELELFPEIKDDVDFCEKLVREESV 363 (403)
T ss_pred HHHHHHHHHHHHHHHHHHhcCC--------------Cceec--C-CCceeEEEEeccccccCCCCCHHHHHHHHHHhCCE
Confidence 2233344445555555554332 11110 1 22467777777432 124456555 356788
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
.+.+|..+. .++++|||++. +.+++.++.|.+.+++
T Consensus 364 ~v~pg~~f~-----------------------~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 401 (403)
T TIGR01265 364 ICLPGSAFG-----------------------LPNWVRITITVPESMLEEACSRIKEFCER 401 (403)
T ss_pred EEeCccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 887776521 25679999985 4555666666666643
No 93
>TIGR01264 tyr_amTase_E tyrosine aminotransferase, eukaryotic. This model describes tyrosine aminotransferase as found in animals and Trypanosoma cruzi. It is the first enzyme of a pathway of tyrosine degradation via homogentisate. Several plant enzyme designated as probable tyrosine aminotransferases are very closely related to an experimentally demonstrated nicotianamine aminotransferase, an enzyme in a siderophore (iron uptake chelator) biosynthesis pathway. These plant sequences are excluded from the model seed and score between the trusted an noise cutoffs.
Probab=99.95 E-value=1.8e-26 Score=218.02 Aligned_cols=293 Identities=16% Similarity=0.125 Sum_probs=187.8
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhc---CCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLD---KADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~---g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
...|.+. |.+ +++++.+++.+.. ..++.++++++++++. ++.+++++||+|++++|+|..+. .+++..|+
T Consensus 66 ~~~Y~~~~g~~~lr~aia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~v~i~~P~y~~~~----~~~~~~g~ 141 (401)
T TIGR01264 66 YNGYAPTVGALSAREAIASYYHNPDGPIEADDVVLCSGCSHAIEMCIAALANAGQNILVPRPGFPLYE----TLAESMGI 141 (401)
T ss_pred CCCCCCCCCCHHHHHHHHHHHhhcCCCCCHHHEEECcChHHHHHHHHHHhCCCCCEEEEeCCCChhHH----HHHHHcCC
Confidence 3567766 775 6777777776531 2234555555569987 45667899999999999998775 55667888
Q ss_pred EEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----
Q 016612 120 VVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----- 184 (386)
Q Consensus 120 ~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----- 184 (386)
+++.++. .|++++++.++++++++++++|+||||.+.+ +++|+++|+++|++||+||+|..-.+.
T Consensus 142 ~v~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~ 221 (401)
T TIGR01264 142 EVKLYNLLPDKSWEIDLKQLESLIDEKTAALIVNNPSNPCGSVFSRQHLEEILAVAERQCLPIIADEIYGDMVFSGATFE 221 (401)
T ss_pred EEEEeecCCccCCCCCHHHHHHHhccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEhhhhhhccCCcccc
Confidence 8888764 2788999888888999999999999999985 888999999999999999998632211
Q ss_pred CC--C-CCCccEEEeccccccccCCCceEEEEEEcCh-----hHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HH
Q 016612 185 RP--L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGE-----RLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MA 251 (386)
Q Consensus 185 ~~--~-~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 251 (386)
.. . .....+++.||||.+ +.+|+|+||++++++ .+.+.+..... ...+.+...+.++...+.. +.
T Consensus 222 ~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~iv~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~q~a~~~~l~~~~~~~l~ 299 (401)
T TIGR01264 222 PLASLSSTVPILSCGGLAKRW-LVPGWRLGWIIIHDRRGILRDIRDGLVKLSQ-RILGPCTIVQGALPSILLRTPQEYFD 299 (401)
T ss_pred cHHHcCCCCcEEEEccCcccC-CCccceEEEEEecCcchhHHHHHHHHHHHhh-ccCCCCcHHHHHHHHHHHhCcHHHHH
Confidence 10 1 112368999999998 557899999998742 12222222221 1223344444444333321 12
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-----HHhHHHHHhhc-Ccceec
Q 016612 252 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----LALSKHVVETT-KYFSIT 325 (386)
Q Consensus 252 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-----~~~~~~l~~~l-~~~gi~ 325 (386)
...+.+.++.+.+.+.|++. +++.+ .. +..|.++++.++. .....++.+.+ ...|+.
T Consensus 300 ~~~~~~~~~r~~l~~~L~~~--------------~~~~~--~~-p~~g~f~~~~~~~~~~~~~~~~~~~~~~l~~~~gI~ 362 (401)
T TIGR01264 300 GTLSVLESNAMLCYGALAAV--------------PGLRP--VM-PSGAMYMMVGIEMEHFPEFKNDVEFTERLVAEQSVF 362 (401)
T ss_pred HHHHHHHHHHHHHHHHHHhC--------------CCCcc--cC-CCeeeEEEEEecccccCCCCCHHHHHHHHHHhCCEE
Confidence 22233333444444444432 12111 11 2236677777632 11245565655 367888
Q ss_pred cCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 326 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 326 ~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
+.+|..+. .++++|||++. +++++.+++|.+.++++
T Consensus 363 v~pg~~f~-----------------------~~~~iRis~~~~~~~l~~~l~rl~~~~~~~ 400 (401)
T TIGR01264 363 CLPGSCFE-----------------------YPGFFRVVLTVPVVMMEEACSRIQEFCERH 400 (401)
T ss_pred EeCchhcC-----------------------CCCeEEEEEcCCHHHHHHHHHHHHHHHhcc
Confidence 77776421 24679999984 67778888888888753
No 94
>PTZ00433 tyrosine aminotransferase; Provisional
Probab=99.95 E-value=4.3e-26 Score=215.79 Aligned_cols=292 Identities=14% Similarity=0.134 Sum_probs=190.1
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcC----------CCceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhh
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDK----------ADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSR 112 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g----------~~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~ 112 (386)
...|.+. |.+ +|+++.+++.+.++ .++.++++++++++.. +..++++||+|+++.|+|+.+. .
T Consensus 68 ~~~Y~~~~G~~~Lr~aia~~~~~~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vlv~~P~y~~~~----~ 143 (412)
T PTZ00433 68 CNGYPPTVGSPEAREAVATYWRNSFVHKESLKSTIKKDNVVLCSGVSHAILMALTALCDEGDNILVPAPGFPHYE----T 143 (412)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHhhccccccccCCCChhhEEEeCChHHHHHHHHHHhcCCCCEEEEccCCcccHH----H
Confidence 4678877 776 78888888876432 2244445555689874 5557899999999999999885 5
Q ss_pred hcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 113 VTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 113 ~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
.++..|++++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|++||+||+|....
T Consensus 144 ~~~~~g~~~~~i~~~~~~~~~~d~~~l~~~~~~~~~~i~~~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~y~~~~ 223 (412)
T PTZ00433 144 VCKAYGIEMRFYNCRPEKDWEADLDEIRRLVDDRTKALIMTNPSNPCGSNFSRKHVEDIIRLCEELRLPLISDEIYAGMV 223 (412)
T ss_pred HHHHcCCEEEEEecCccccCcCCHHHHHHHhccCceEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCeEEEeccccccc
Confidence 567788888888752 688999888888999999999999999875 7788999999999999999986322
Q ss_pred cc-----CCCC---CCccEEEeccccccccCCCceEEEEEEcC-----hhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc
Q 016612 183 LS-----RPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKG-----ERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (386)
Q Consensus 183 ~~-----~~~~---~~~di~~~S~sK~~~g~~g~~~G~i~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (386)
+. .... ....+++.|+||.+ |.+|+|+||+++.+ +++.+.+...... ..+.+...+.++...+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~i~~~SfSK~~-~~pGlRlG~~i~~~p~~~~~~~~~~~~~~~~~-~~~~~~~~q~a~~~~l~~ 301 (412)
T PTZ00433 224 FNGATFTSVADFDTTVPRVILGGTAKNL-VVPGWRLGWLLLVDPHGNGGDFLDGMKRLGML-VCGPCSVVQAALGEALLN 301 (412)
T ss_pred cCCCCccchhhccCCCceEEEccchhhc-CCCCeeEEEEEEeCCcccHHHHHHHHHHHhhc-cCCCChHHHHHHHHHHhc
Confidence 21 1111 12468899999999 45689999999731 2344444443322 234555555554443321
Q ss_pred -----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----HhHHHHHhhc
Q 016612 250 -----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETT 319 (386)
Q Consensus 250 -----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l 319 (386)
+....+.+.++.+.+.+.|++. .+..+. . +..+.++++.++.. ....++.+.+
T Consensus 302 ~~~~~~~~~~~~~~~~r~~l~~~L~~~--------------~~~~~~--~-p~gg~f~~~~l~~~~~~~~~~~~~~~~~l 364 (412)
T PTZ00433 302 TPQEHLEQIVAKLEEGAMVLYNHIGEC--------------IGLSPT--M-PRGSMFLMSRLDLEKFRDIKSDVEFYEKL 364 (412)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHhcC--------------CCCccc--C-CCeeEEEEEEechhhcCCCCCHHHHHHHH
Confidence 1222223333444444444322 111111 1 11255667676431 1245666666
Q ss_pred C-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 320 K-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 320 ~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
. ..|+.+.+|..+. .++++||+++. +++++.++.|.+++++
T Consensus 365 l~~~gV~v~pg~~f~-----------------------~~~~iRis~~~~~e~l~~al~~l~~~~~~ 408 (412)
T PTZ00433 365 LEEENVQVLPGEIFH-----------------------MPGFTRLTISRPVEVLREAVERIKAFCER 408 (412)
T ss_pred HHhcCEEEeCccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 4 4688877776521 14679999985 5677777777777754
No 95
>PRK07309 aromatic amino acid aminotransferase; Validated
Probab=99.95 E-value=7.5e-26 Score=212.80 Aligned_cols=293 Identities=14% Similarity=0.154 Sum_probs=191.0
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
..|.+. |.+ +++++.+++...+|. + +.++++++++++.+ +..++++||+|++++|+|+++. .+++..|
T Consensus 61 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~it~G~~~al~~~~~~~~~~gd~vl~~~p~y~~~~----~~~~~~g 136 (391)
T PRK07309 61 SHYTGMAGLLELRQAAADFVKEKYNLDYAPENEILVTIGATEALSASLTAILEPGDKVLLPAPAYPGYE----PIVNLVG 136 (391)
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcC
Confidence 357766 766 788888888776664 2 45555555699874 5567899999999999999985 4556788
Q ss_pred cEEEEeCCC------CHHHHHhhhC---CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc--
Q 016612 119 VVVKRVNTC------DLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-- 184 (386)
Q Consensus 119 ~~~~~v~~~------d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-- 184 (386)
.+++.++.+ |+++++++++ ++++++++++|+||||.+++ +++|.++|++||+++|+|++|+...+.
T Consensus 137 ~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~~i~l~~P~NPtG~~~s~~~~~~l~~~~~~~~~~ii~D~~y~~~~~~~~ 216 (391)
T PRK07309 137 AEIVEIDTTENDFVLTPEMLEKAILEQGDKLKAVILNYPANPTGVTYSREQIKALADVLKKYDIFVISDEVYSELTYTGE 216 (391)
T ss_pred CEEEEEecCCcCCcCCHHHHHHHhhccCCCeEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEccccceeeCCC
Confidence 888888753 6788988876 36899999999999999985 889999999999999999998743221
Q ss_pred ---CCC--CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH----HHHHH
Q 016612 185 ---RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM----ALRVE 255 (386)
Q Consensus 185 ---~~~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 255 (386)
... ..+..+++.|+||.+ |.+|+|+||++++++ +.+.+...........+...+.++...++.. .....
T Consensus 217 ~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRvG~~v~~~~-~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 294 (391)
T PRK07309 217 PHVSIAEYLPDQTILINGLSKSH-AMTGWRIGLIFAPAE-FTAQLIKSHQYLVTAATTMAQFAAVEALTNGKDDALPMKK 294 (391)
T ss_pred CCCCHHHhccCCEEEEecChhhc-cCccceeEEEEeCHH-HHHHHHHHHhhcccCCChHHHHHHHHHHhCChhHHHHHHH
Confidence 111 124569999999999 556899999998754 5554544433333344555555544444321 11123
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhh-cCcceeccCCCCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVET-TKYFSITVSFGSVK 332 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~-l~~~gi~~~~G~~~ 332 (386)
.+.++.+.+.+.+++.. +. +. . +..+.++++.++.. .....+.+. +...|+.+.+|..+
T Consensus 295 ~~~~~~~~~~~~l~~~~---------~~------~~--~-p~gg~~~~~~l~~~~~~~~~~~~~~l~~~~gv~v~pg~~f 356 (391)
T PRK07309 295 EYIKRRDYIIEKMTDLG---------FK------II--K-PDGAFYIFAKIPAGYNQDSFKFLQDFARKKAVAFIPGAAF 356 (391)
T ss_pred HHHHHHHHHHHHHHHCC---------Ce------ec--C-CCeeEEEEEECCCCCCCCHHHHHHHHHHhCCEEEeCchhh
Confidence 33344444444444321 11 11 1 11234455565432 123444543 34567877777642
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
. ..++++|||+++. +++++.++.|++++++.
T Consensus 357 ~---------------------~~~~~~iRi~~~~~~~~l~~~i~~l~~~~~~~ 389 (391)
T PRK07309 357 G---------------------PYGEGYVRLSYAASMETIKEAMKRLKEYMEEH 389 (391)
T ss_pred C---------------------CCCCCEEEEEecCCHHHHHHHHHHHHHHHHhh
Confidence 1 1135789999974 57777888888877653
No 96
>PLN02376 1-aminocyclopropane-1-carboxylate synthase
Probab=99.95 E-value=6.1e-26 Score=217.58 Aligned_cols=290 Identities=14% Similarity=0.133 Sum_probs=185.8
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcC----CC-ceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcc-c
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDK----AD-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-K 116 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g----~~-~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~-~ 116 (386)
..|... |.+ +|+++.+++.+.+| .+ +.|++++|+ +++. ++.++++|||.|++++|.|+.+.. .+. .
T Consensus 88 ~~y~~~~G~~~LR~aiA~~l~~~~g~~v~v~pe~Ivit~Ga~~al~~l~~~l~~pGD~Vlv~~P~Y~~~~~----~~~~~ 163 (496)
T PLN02376 88 ANFQDYHGLKKFRQAIAHFMGKARGGKVTFDPERVVMSGGATGANETIMFCLADPGDVFLIPSPYYAAFDR----DLRWR 163 (496)
T ss_pred hccCCCCCcHHHHHHHHHHHHHHhCCCCcCChhhEEEccchHHHHHHHHHHhCCCCCEEEECCCCccchHH----HHHhh
Confidence 346666 776 89999999988766 33 456566665 8887 556689999999999999999863 233 5
Q ss_pred CCcEEEEeCCC-------CHHHHHhhh------CCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 117 TGVVVKRVNTC-------DLDEVASAI------GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 117 ~g~~~~~v~~~-------d~~~l~~~~------~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
.|++++.++++ |++++++++ ..++++|++++|+||||.+++ +++|+++|+++|++||+||+|+.
T Consensus 164 ~G~~vv~v~~~~~~~~~~~~~~le~a~~~a~~~~~~~k~l~l~nP~NPTG~~~s~e~l~~L~~~a~~~~i~lI~DEiY~~ 243 (496)
T PLN02376 164 TGVEIIPVPCSSSDNFKLTVDAADWAYKKAQESNKKVKGLILTNPSNPLGTMLDKDTLTNLVRFVTRKNIHLVVDEIYAA 243 (496)
T ss_pred CCCEEEEEeCCCCccCcCCHHHHHHHHHHHHhcCCCeeEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEcCccc
Confidence 78999998872 567776542 247899999999999999997 67789999999999999999874
Q ss_pred CCcc-----CC--C----C-----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 181 PVLS-----RP--L----E-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 181 ~~~~-----~~--~----~-----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
..+. +. . + .+..+++.|+||.+ |.+|+|+||+++.++.+.+........ ...+...+.++.
T Consensus 244 ~~f~~~~~~si~~l~~~~~~~~~~~~~v~vv~S~SK~~-glpGlRvG~li~~~~~l~~~~~~~~~~--~~vs~~~Q~a~~ 320 (496)
T PLN02376 244 TVFAGGDFVSVAEVVNDVDISEVNVDLIHIVYSLSKDM-GLPGFRVGIVYSFNDSVVSCARKMSSF--GLVSSQTQLMLA 320 (496)
T ss_pred cccCCCCcccHHHhhccccccccCCCeEEEEEeccccC-CCCcceEEEEEECCHHHHHHHHHHhhc--CCCCHHHHHHHH
Confidence 3221 10 0 0 01235689999999 556899999999767666544433322 234555666555
Q ss_pred hcCCcHH---HH----HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-------H
Q 016612 245 RGVKTMA---LR----VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-------A 310 (386)
Q Consensus 245 ~~~~~~~---~~----~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-------~ 310 (386)
..+..-. .. .+.+.+..+.+.+.|++. ++... . ...|.++|+.++.. +
T Consensus 321 ~~L~d~~~~~~~l~~~r~~l~~r~~~l~~~L~~~---------gi~~~--------~-~~aG~flwi~l~~~~~~~~~~~ 382 (496)
T PLN02376 321 SMLSDDQFVDNFLMESSRRLGIRHKVFTTGIKKA---------DIACL--------T-SNAGLFAWMDLRHLLRDRNSFE 382 (496)
T ss_pred HHhCChhHHHHHHHHHHHHHHHHHHHHHHHHHHC---------CCccc--------C-CCceEEEEEEchhhhccCCchh
Confidence 5444311 11 112222233333333321 11111 1 12356677766421 1
Q ss_pred hHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHh
Q 016612 311 LSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALR 382 (386)
Q Consensus 311 ~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~ 382 (386)
...++.+.+. ..|+.+.+|..+. ...+++|||+++. +.+++.+++|++++.
T Consensus 383 ~e~~l~~~ll~~~gV~v~pGs~F~---------------------~~~~g~~Ri~fa~~~~~~l~~al~rl~~~l~ 437 (496)
T PLN02376 383 SEIELWHIIIDKVKLNVSPGSSFR---------------------CTEPGWFRICFANMDDDTLHVALGRIQDFVS 437 (496)
T ss_pred HHHHHHHHHHHcCCEEEeCccccC---------------------CCCCCEEEEEeeCCCHHHHHHHHHHHHHHHH
Confidence 1234444443 3588888876531 0135789999984 556666777777664
No 97
>TIGR03538 DapC_gpp succinyldiaminopimelate transaminase. This family of succinyldiaminopimelate transaminases (DapC) includes the experimentally characterized enzyme from Bordatella pertussis. The majority of genes in this family are proximal to genes encoding components of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.95 E-value=2.7e-26 Score=216.15 Aligned_cols=292 Identities=20% Similarity=0.230 Sum_probs=189.3
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC----C--ceEEeCcHH-HHHHHH-HHhcCCCCE--EEecCCCCCcHHHHHhh
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----D--RALCFTSGM-AALAAV-THLLGTGEE--IVAGDDLYGGTDRLLSR 112 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~--~~i~~~~gt-~al~~~-~~~~~~g~~--Vlv~~~~~~~~~~~~~~ 112 (386)
....|.+. |.+ +|+++.+++.+.+|. + +.|++++|+ +++..+ ..+++|||. |++++|.|+.+. .
T Consensus 56 ~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~~~~i~it~Ga~~al~~~~~~l~~~gd~~~vlv~~P~y~~~~----~ 131 (393)
T TIGR03538 56 GLSTYPTTKGLPELRQAIARWLERRFDLPTGVDPERHVLPVNGTREALFAFAQAVINPGQAPLVVMPNPFYQIYE----G 131 (393)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCcccCCCCceEEECCCcHHHHHHHHHHHcCCCCcceEEecCCCCcchH----H
Confidence 34668877 776 899999998877542 2 356666665 888754 557899986 999999998885 4
Q ss_pred hcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 113 VTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 113 ~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
.++..|.+++.++.+ |++++++.+.++++++++++|+||||.+++ +++|.++|+++|++||+||+|....
T Consensus 132 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~i~l~~p~NPtG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~~~ 211 (393)
T TIGR03538 132 AALLAGAEPYFLNCTAENGFLPDFDAVPESVWRRCQLLFVCSPGNPTGAVLSLDTLKKLIELADQYGFIIASDECYSELY 211 (393)
T ss_pred HHHhcCCeEEEeeccccCCCCCCHHHHHHHHhhcceEEEEeCCCCCcCcccCHHHHHHHHHHHHHCCEEEEECcchhhcc
Confidence 566788898888752 678888888778999999999999999987 7889999999999999999986322
Q ss_pred ccC---C---------C---CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC
Q 016612 183 LSR---P---------L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (386)
Q Consensus 183 ~~~---~---------~---~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
+.. + . ..+..+++.|+||.+ +.+|+|+||++++ +.+.+.+...........+...+.++...+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~S~SK~~-~~~GlRvG~~i~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l 289 (393)
T TIGR03538 212 FDEGNPPAGLLQAAAQLGRDDFRRCLVFHSLSKRS-NLPGLRSGFVAGD-AEILKAFLRYRTYHGCAMPIPTQLASIAAW 289 (393)
T ss_pred cCCCCCCcCHHHhcccccccccccEEEEecchhhc-CCcccceEEEecC-HHHHHHHHHHHHhhccCcCHHHHHHHHHHh
Confidence 110 0 0 123569999999988 4568999999987 445555554444334445555555544433
Q ss_pred Cc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhc-Ccce
Q 016612 248 KT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFS 323 (386)
Q Consensus 248 ~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~g 323 (386)
.. +....+.+.++.+.+.+.+++. +. + .. ...|.++++.++. ...++.+.+ +..|
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~L~~~----------~~------~--~~-p~gg~f~~~~~~~--~~~~~~~~l~~~~g 348 (393)
T TIGR03538 290 NDEQHVRENRALYREKFAAVLEILGQV----------LD------L--EL-PDAGFYLWPKVPG--DDEAFARALYEEEN 348 (393)
T ss_pred cChHHHHHHHHHHHHHHHHHHHHHHhh----------Cc------c--cC-CCeeEEEEEECCC--CHHHHHHHHHHHCC
Confidence 22 2222333444444444544432 00 0 01 2236677777761 234566554 3568
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHH
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLD 378 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~ 378 (386)
+.+.+|..+...... .....+++|||++. +.+++.+++|+
T Consensus 349 V~v~pg~~f~~~~~~---------------~~~~~~~~Ris~~~~~~~l~~~l~~l~ 390 (393)
T TIGR03538 349 VTVLPGRFLAREAEG---------------VNPGEGRVRIALVAPLEECVEAAERIR 390 (393)
T ss_pred EEEeCCccccccccC---------------CCCCCCEEEEEecCCHHHHHHHHHHHH
Confidence 888887753211000 00125789999975 33334444443
No 98
>PRK09148 aminotransferase; Validated
Probab=99.95 E-value=4e-26 Score=215.46 Aligned_cols=292 Identities=16% Similarity=0.136 Sum_probs=185.4
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +++++.+++.+.+|. ++.|++++| ++++.. +..++++||.|++++|+|+.+. ..++..
T Consensus 61 ~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vl~~~P~y~~~~----~~~~~~ 136 (405)
T PRK09148 61 THRYSASKGIPGLRRAQAAYYARRFGVKLNPDTQVVATLGSKEGFANMAQAITAPGDVILCPNPSYPIHA----FGFIMA 136 (405)
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCCcccH----HHHHhc
Confidence 4678877 776 889999998876664 324556666 588875 4557899999999999999885 344567
Q ss_pred CcEEEEeCCC----CHHHHHhhh---CCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc----
Q 016612 118 GVVVKRVNTC----DLDEVASAI---GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---- 183 (386)
Q Consensus 118 g~~~~~v~~~----d~~~l~~~~---~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~---- 183 (386)
|.+++.++.+ .++++++.+ .++++++++++|+||||.+++ +++|.++|+++|++||+||+|....+
T Consensus 137 g~~v~~v~~~~~~~~~~~l~~~~~~~~~~~~~v~l~~P~NPtG~~~s~~~l~~l~~~a~~~~~~ii~De~Y~~~~~~~~~ 216 (405)
T PRK09148 137 GGVIRSVPAEPDEEFFPALERAVRHSIPKPIALIVNYPSNPTAYVADLDFYKDVVAFAKKHDIIILSDLAYSEIYFDGNP 216 (405)
T ss_pred CCEEEEEeCCCCCCCccCHHHHHhhccccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEeccchhhhcCCCC
Confidence 9999888763 233444443 368899999999999999997 47899999999999999999863221
Q ss_pred -cCCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHH
Q 016612 184 -SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRV 254 (386)
Q Consensus 184 -~~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 254 (386)
..... .+..+++.|+||.+ |.+|+|+||++++ +.+.+.+...+.....+.+...+.++...+.. +....
T Consensus 217 ~~s~~~~~~~~~~~i~~~SfSK~~-~~pGlR~G~~v~~-~~~i~~l~~~~~~~~~~~~~~~q~~~~~~L~~~~~~~~~~~ 294 (405)
T PRK09148 217 PPSVLQVPGAKDVTVEFTSMSKTF-SMAGWRMGFAVGN-ERLIAALTRVKSYLDYGAFTPIQVAATAALNGPQDCIAEMR 294 (405)
T ss_pred CCChhhCCCccCcEEEEecccccc-CCcchheeeeeCC-HHHHHHHHHHHHHhccCCChHHHHHHHHHHhCcHHHHHHHH
Confidence 11111 23457899999999 5568999999986 55666666555443444445555444444432 12223
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH---HhHHHHHhhc-CcceeccCCCC
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVETT-KYFSITVSFGS 330 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l-~~~gi~~~~G~ 330 (386)
..+.++.+.+.+.|++.. +. + .. +..|.++++.++.. ....++.+.+ ...|+.+.+|.
T Consensus 295 ~~~~~~r~~l~~~L~~~~---------~~------~--~~-p~~g~f~~~~l~~~~~~~~~~~~~~~ll~~~gV~v~pg~ 356 (405)
T PRK09148 295 ELYKKRRDVLVESFGRAG---------WD------I--PP-PAASMFAWAPIPEAFRHLGSLEFSKLLVEKADVAVAPGV 356 (405)
T ss_pred HHHHHHHHHHHHHHHHcC---------Cc------c--CC-CCeeEEEEEECCCccCCCCHHHHHHHHHHhCCEEEeCch
Confidence 334444444555554321 11 0 01 12345677776431 1134454443 35688777776
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
.+. ...++++||+++. +...+.++.|.++++
T Consensus 357 ~f~---------------------~~~~~~~Ri~~~~~~~~l~~al~~l~~~l~ 389 (405)
T PRK09148 357 GFG---------------------EHGDGYVRIALVENEQRIRQAARNIKRFLS 389 (405)
T ss_pred hhC---------------------CCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 521 0125789999973 333334444454443
No 99
>PRK08363 alanine aminotransferase; Validated
Probab=99.95 E-value=2.9e-26 Score=216.27 Aligned_cols=294 Identities=17% Similarity=0.155 Sum_probs=185.4
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC--C--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA--D--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~--~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|+.. |.+ +++++.+++.+.+|. + +.++++++++++.. +.+++++||.|++++|+|+.+. ..++..|
T Consensus 63 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~it~G~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g 138 (398)
T PRK08363 63 HNYYGPSEGLPELREAIVKREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILIPGPSYPPYT----GLVKFYG 138 (398)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCCcchH----HHHHHcC
Confidence 3467655 665 788888877766553 2 45555555689874 4567899999999999999885 4455677
Q ss_pred cEEEEe-CC------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRV-NT------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v-~~------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.+ +. .|++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|....+.
T Consensus 139 ~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~a~~~~~~li~Deay~~~~~~~~~~ 218 (398)
T PRK08363 139 GVPVEYRTIEEEGWQPDIDDIRKKITEKTKAIAVINPNNPTGALYEKKTLKEILDIAGEHDLPVISDEIYDLMTYEGKHV 218 (398)
T ss_pred CEEEEeccccccCCcCCHHHHHhhCCcceEEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCeEEEEhhhhhhhccCCccc
Confidence 777666 22 2688899888889999999999999999987 889999999999999999998642221
Q ss_pred C---CCCCCccEEEeccccccccCCCceEEEEEE-cChhHHHHHHHhhhh---cCCCCChhhHHHHHhcCCc----HHHH
Q 016612 185 R---PLELGADIVMHSATKFIAGHSDVMAGVLAV-KGERLAKELYFLQNA---EGSGLAPFDCWICLRGVKT----MALR 253 (386)
Q Consensus 185 ~---~~~~~~di~~~S~sK~~~g~~g~~~G~i~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~----~~~~ 253 (386)
. .......+++.|+||+++ .+|+|+||+++ .++.+.+.+...... .....+...+.++...+.. +...
T Consensus 219 ~~~~~~~~~~vi~~~SfSK~~~-~~GlRiG~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~l~~~ 297 (398)
T PRK08363 219 SPGSLTKDVPVIVMNGLSKVYF-ATGWRLGYIYFVDPEGKLAEVREAIDKLARIRLCPNTPAQFAAIAGLTGPMDYLEEY 297 (398)
T ss_pred CHHHcCcCCcEEEEecchhccC-CccceEEEEEEeCcHHHHHHHHHHHHHHhcccccCChHHHHHHHHHHhCChHHHHHH
Confidence 0 111235788999999984 46899999998 334333333222111 1123444444444333321 2222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-EeCC---HHhHHHHHhhcCcceeccCCC
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGS---LALSKHVVETTKYFSITVSFG 329 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~---~~~~~~l~~~l~~~gi~~~~G 329 (386)
.+.+.++.+.+.+.+++. ++..+. ...++++.| .++. ....+.+.+.+...|+.+.+|
T Consensus 298 ~~~~~~~~~~l~~~L~~~--------------~~~~~~----~p~g~~~~~~~l~~~~~~~~~~~~~~~l~~~gV~v~~g 359 (398)
T PRK08363 298 MKKLKERRDYIYKRLNEI--------------PGISTT----KPQGAFYIFPRIEEGPWKDDKEFVLDVLHEAHVLFVHG 359 (398)
T ss_pred HHHHHHHHHHHHHHHhcC--------------CCCEec----CCCeEEEEEEEeccCCCCCHHHHHHHHHHhCCEEEeCc
Confidence 333344444444444332 222211 223566655 5543 122233344456778887777
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
..+. ..+++++|||++. +++++.++.|++.+++
T Consensus 360 ~~f~---------------------~~~~~~iRis~~~~~~~l~~~l~~l~~~~~~ 394 (398)
T PRK08363 360 SGFG---------------------EYGAGHFRLVFLPPVEILEEAMDRFEEFMRE 394 (398)
T ss_pred hhhC---------------------CCCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 6532 1135789999973 5566777777777654
No 100
>PRK07590 L,L-diaminopimelate aminotransferase; Validated
Probab=99.95 E-value=1.2e-26 Score=219.62 Aligned_cols=291 Identities=15% Similarity=0.137 Sum_probs=180.0
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC--C-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA--D-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
....|.+. |.+ +|+++.+++.+..|. + +.|++++|+ +++.++..++++||+|++++|+|+.+. .+++..|
T Consensus 68 ~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~l~~~~~~gd~V~v~~P~Y~~~~----~~~~~~g 143 (409)
T PRK07590 68 TFRGYGPEQGYDFLREKIAENDYQARGCDISADEIFISDGAKCDTGNILDIFGPDNTIAVTDPVYPVYV----DTNVMAG 143 (409)
T ss_pred CccCCCCCCCCHHHHHHHHHHHHHhcCCcCChhhEEECCCHHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcC
Confidence 44678766 776 788888887766554 2 566666665 888877778899999999999999986 4445666
Q ss_pred cE-----------EEEeCCCCHHHHHhhh-CCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 119 VV-----------VKRVNTCDLDEVASAI-GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 119 ~~-----------~~~v~~~d~~~l~~~~-~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
.+ ++.++.+.-+.+...+ .+++++|++++|+||||.+++ +++|.++|+++|++||+||+|..-..
T Consensus 144 ~~~~~~~~~~~~~~~~v~~~~~~~~~~d~~~~~~k~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~~~ 223 (409)
T PRK07590 144 RTGEANEDGRYSGIVYLPCTAENNFVPELPEEKVDIIYLCFPNNPTGTVLTKEQLKAWVDYAKENGSLILFDAAYEAFIS 223 (409)
T ss_pred CcccccccccccceeEeecccccCCcccCcccCceEEEEeCCCCCcCCcCCHHHHHHHHHHHHHcCeEEEEEccchhhcc
Confidence 64 7777764211222222 268999999999999999986 67788899999999999999863211
Q ss_pred c----CC-C--C--CCccEEEeccccccccCCCceEEEEEEcChhHHHH------------HHHhhhhcCCCCChhhHHH
Q 016612 184 S----RP-L--E--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE------------LYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 184 ~----~~-~--~--~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~ 242 (386)
. .+ . . .+..++++|+||.+ |.+|+|+||++++++ +.+. ............+...+.+
T Consensus 224 ~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~pGlRiG~~i~~~~-li~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~q~a 301 (409)
T PRK07590 224 DPSLPHSIYEIEGARECAIEFRSFSKTA-GFTGTRCAYTVVPKE-LKGKTSDGEGVSLNSLWNRRQSTKFNGVSYIVQRA 301 (409)
T ss_pred CCCCCcchhhCCCcccceEEEecCcccc-CCcCceeEEEEcCHH-HhhhccccchhhhHHHHHHHHhhcccCcCHHHHHH
Confidence 1 11 1 1 13468899999999 556899999999754 4331 1111111112345555554
Q ss_pred HHhcCCc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHh
Q 016612 243 CLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 317 (386)
Q Consensus 243 ~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 317 (386)
+...+.. +....+.+.++.+.+.+.|++.. + .+. . ...+.++|+.+++.....++.+
T Consensus 302 ~~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~---------~------~~~--~-~~g~~f~wi~~~~~~~~~~~~~ 363 (409)
T PRK07590 302 AEAVYSPEGKAQIKELIDYYMENAKIIREGLESAG---------F------EVY--G-GVNAPYIWVKTPDGMSSWDFFD 363 (409)
T ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHhcC---------C------cee--c-CCcceEEEEECCCCCCHHHHHH
Confidence 4333321 12223334445555555555431 1 111 1 1135677888754323445555
Q ss_pred hcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHH
Q 016612 318 TTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKA 380 (386)
Q Consensus 318 ~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~ 380 (386)
.+. ..++.+.+|..+. ..+.+++|||+. .+++++.++.|.++
T Consensus 364 ~l~~~~gv~v~pg~~f~---------------------~~~~~~iRi~~~~~~~~l~~~l~rl~~~ 408 (409)
T PRK07590 364 KLLQEANVVGTPGSGFG---------------------PSGEGYFRLSAFGSRENVLEAMERIKKA 408 (409)
T ss_pred HHHHHCCEEEeChhHhC---------------------CCCCCEEEEEccCCHHHHHHHHHHHHhh
Confidence 443 4577777765421 012568999963 35666666666554
No 101
>PRK07179 hypothetical protein; Provisional
Probab=99.95 E-value=2.5e-26 Score=217.34 Aligned_cols=328 Identities=16% Similarity=0.143 Sum_probs=216.3
Q ss_pred CccceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC--CCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-
Q 016612 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (386)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~- 84 (386)
++...+++++ +|+|+|....|.+........+.........+.. +.+...++++.+++++|.++.+++++|++|+.
T Consensus 51 ~~g~~~~~~~-~~~YL~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~sG~~An~~ 129 (407)
T PRK07179 51 TPGPDAIILQ-SNDYLNLSGHPDIIKAQIAALQEEGDSLVMSAVFLHDDSPKPQFEKKLAAFTGFESCLLCQSGWAANVG 129 (407)
T ss_pred CCCCcEEEee-cCCccCCCCCHHHHHHHHHHHHHhCCCCCccccccCCchHHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 4456688999 9999999987755422211110000111111222 34578999999999999998899999999886
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHH
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAE 163 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~ 163 (386)
++.++..+||.|+++.+.|.+... .++..|.+++.++..|++++++.+++ ++++|++++++||+|.+.|+++|.+
T Consensus 130 ~l~~l~~~g~~v~~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~lV~v~~v~n~tG~i~pl~~I~~ 205 (407)
T PRK07179 130 LLQTIADPNTPVYIDFFAHMSLWE----GVRAAGAQAHPFRHNDVDHLRRQIERHGPGIIVVDSVYSTTGTIAPLADIVD 205 (407)
T ss_pred HHHHhCCCCCEEEEECCcCHHHHH----HHHHCCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCccccHHHHHH
Confidence 556678899999999888877753 33456788888887899999999875 5889999999999999999999999
Q ss_pred HHHHcCCEEEEeCCCCCCCccC-------CC--CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh--cC
Q 016612 164 MAHAHGALLLVDNSIMSPVLSR-------PL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EG 232 (386)
Q Consensus 164 la~~~~~~li~D~a~~~~~~~~-------~~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--~~ 232 (386)
+|+++|+++|+||+|+.+.... .. ..+.|+++.|+||++++ ++|+++++ +.+.+.+...... .+
T Consensus 206 l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~vdi~~~S~sK~~g~----~~G~l~~~-~~~~~~~~~~~~~~~~~ 280 (407)
T PRK07179 206 IAEEFGCVLVVDESHSLGTHGPQGAGLVAELGLTSRVHFITASLAKAFAG----RAGIITCP-RELAEYVPFVSYPAIFS 280 (407)
T ss_pred HHHHcCCEEEEECcccccCcCCCCCchHHhcCCCCCCCEEEeechHhhhc----cCeEEEeC-HHHHHHHHHhCcCeeeC
Confidence 9999999999999998654321 11 12458999999999953 37999886 4455544433221 22
Q ss_pred CCCChhhHHHHHhcC---CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH
Q 016612 233 SGLAPFDCWICLRGV---KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 309 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (386)
....+...+.+...+ .....+.++..++.+.+.+.|++.. + .+ .+.++++++.++..
T Consensus 281 ~t~~~~~~aa~~aal~~~~~~~~~~~~l~~~~~~l~~~L~~~g---------~------~v-----~~~~~i~~l~~~~~ 340 (407)
T PRK07179 281 STLLPHEIAGLEATLEVIESADDRRARLHANARFLREGLSELG---------Y------NI-----RSESQIIALETGSE 340 (407)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------C------CC-----CCCCCEEEEEeCCH
Confidence 232333332222222 2223344555556666666665431 1 11 12357888887654
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcCC
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTGP 385 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~~ 385 (386)
.....+.+.+..+|+..+ . ++.|.. ....+++||+++. ++++++++.|++++++.+
T Consensus 341 ~~~~~~~~~L~~~GI~~~---~---~~~p~~--------------~~~~~~lRis~~~~~t~edi~~~~~~l~~~~~~~~ 400 (407)
T PRK07179 341 RNTEVLRDALEERNVFGA---V---FCAPAT--------------PKNRNLIRLSLNADLTASDLDRVLEVCREARDEVD 400 (407)
T ss_pred HHHHHHHHHHHHCCceEe---e---ecCCCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHhhC
Confidence 446677777777777522 1 112211 0124679999974 777777777877777654
No 102
>PRK07683 aminotransferase A; Validated
Probab=99.95 E-value=5.5e-26 Score=213.42 Aligned_cols=291 Identities=19% Similarity=0.219 Sum_probs=188.4
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcHHHHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~gt~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +++++.+++.+.+|. + +.++++++++|+..+ ..++++||.|+++.|+|+.+. .+++..
T Consensus 58 ~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~~I~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~ 133 (387)
T PRK07683 58 YTSYTHNAGLLELRKAACNFVKDKYDLHYSPESEIIVTIGASEAIDIAFRTILEPGTEVILPAPIYPGYE----PIIRLC 133 (387)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCccchH----HHHHHc
Confidence 4567765 766 788888888766553 2 344444456998754 557899999999999999885 444567
Q ss_pred CcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 118 GVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 118 g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
|.+++.++.+ |.+++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 134 g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~p~NPtG~~~s~~~~~~l~~~~~~~~~~ii~De~y~~~~~~~~~~ 213 (387)
T PRK07683 134 GAKPVFIDTRSTGFRLTAEALENAITEKTRCVVLPYPSNPTGVTLSKEELQDIADVLKDKNIFVLSDEIYSELVYEQPHT 213 (387)
T ss_pred CCEEEEeecCcccCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCeEEEEecccccceeCCCcC
Confidence 8999888764 568899988888999999999999999975 788999999999999999998743321
Q ss_pred CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHH
Q 016612 185 RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEK 256 (386)
Q Consensus 185 ~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 256 (386)
... ..+.++++.|+||.+ |.+|+|+||+++++ .+.+.+...........+...+.++...+.. .......
T Consensus 214 ~~~~~~~~~~~vi~~~s~SK~~-~~pGlRiG~i~~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~ 291 (387)
T PRK07683 214 SIAHFPEMREKTIVINGLSKSH-SMTGWRIGFLFAPS-YLAKHILKVHQYNVTCASSISQYAALEALTAGKDDAKMMRHQ 291 (387)
T ss_pred ChhhccCCcCCeEEEeeccccc-cCccceeEEEEcCH-HHHHHHHHHHHhccCCCChHHHHHHHHHHhCChHHHHHHHHH
Confidence 111 124679999999999 54589999999874 4555444433332233344444444333321 2222333
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-eCC-HHhHHHHH-hhcCcceeccCCCCccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGS-LALSKHVV-ETTKYFSITVSFGSVKS 333 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~-~~~~~~l~-~~l~~~gi~~~~G~~~~ 333 (386)
+.++.+.+.+.+.+. ++. ++ ...++++.|. ++. ......+. +.+...|+.+.+|..+.
T Consensus 292 ~~~~~~~~~~~l~~~---------~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~gI~v~pg~~f~ 352 (387)
T PRK07683 292 YKKRRDYVYNRLISM---------GLD------VE----KPTGAFYLFPSIGHFTMSSFDFALDLVEEAGLAVVPGSAFS 352 (387)
T ss_pred HHHHHHHHHHHHHHc---------CCc------cc----CCCeeEEEEEecccCCCCHHHHHHHHHHhCCEEEcCchhhC
Confidence 444555555555432 111 11 1234555544 432 11233344 33566788877776532
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
+.+++++||+++. +++.+.+++|.+.++
T Consensus 353 ---------------------~~~~~~~Ri~~~~~~~~~~~al~~l~~~l~ 382 (387)
T PRK07683 353 ---------------------EYGEGYVRLSYAYSIETLKEGLDRLEAFLQ 382 (387)
T ss_pred ---------------------CCCCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 1135789999984 555666777776664
No 103
>PRK09265 aminotransferase AlaT; Validated
Probab=99.95 E-value=4.3e-26 Score=215.51 Aligned_cols=295 Identities=16% Similarity=0.150 Sum_probs=187.1
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhc--CCC-ceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLD--KAD-RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~--g~~-~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|+.. |.+ +++++.+++.... +.+ +.|++++|+ +++. ++.+++++||+|++++|+|+.+.. .++..|
T Consensus 65 ~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~p~y~~~~~----~~~~~g 140 (404)
T PRK09265 65 AQGYSDSKGLFSARKAIMQYYQQKGIPDVDVDDIYIGNGVSELIVMAMQALLNNGDEVLVPAPDYPLWTA----AVSLSG 140 (404)
T ss_pred CCCCCCCCCcHHHHHHHHHHHhccCCCCCCcccEEEeCChHHHHHHHHHHhCCCCCEEEEeCCCCcChHH----HHHHcC
Confidence 3568776 765 7777777775432 333 456666665 7786 455678999999999999998863 344567
Q ss_pred cEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|.++|+++|++||+||+|..-.+.
T Consensus 141 ~~~v~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~P~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 220 (404)
T PRK09265 141 GKPVHYLCDEEAGWFPDLDDIRSKITPRTKAIVIINPNNPTGAVYSKELLEEIVEIARQHNLIIFADEIYDKILYDGAVH 220 (404)
T ss_pred CEEEEEecccccCCCCCHHHHHHhccccceEEEEECCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEehhhhhccCCCCCc
Confidence 77766543 2688999988888999999999999999998 889999999999999999998632211
Q ss_pred -CC---CCCCccEEEeccccccccCCCceEEEEEEc-Chh----HHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH---H
Q 016612 185 -RP---LELGADIVMHSATKFIAGHSDVMAGVLAVK-GER----LAKELYFLQNAEGSGLAPFDCWICLRGVKTMA---L 252 (386)
Q Consensus 185 -~~---~~~~~di~~~S~sK~~~g~~g~~~G~i~~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~ 252 (386)
.. ......+++.|+||.+ +.+|+|+||++.+ ++. +.+.+.... ......+...+.++...+.... .
T Consensus 221 ~~~~~~~~~~~vi~~~S~SK~~-~~pGlRiG~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~q~~~~~~l~~~~~~~~ 298 (404)
T PRK09265 221 ISIASLAPDLLCVTFNGLSKAY-RVAGFRVGWMVLSGPKKHAKGYIEGLDMLA-SMRLCANVPAQHAIQTALGGYQSINE 298 (404)
T ss_pred CCHHHcCCCceEEEEecchhhc-cCcccceEEEEEeCchHHHHHHHHHHHHHh-ccccCCCcHHHHHHHHHhcCchhHHH
Confidence 11 1112457889999999 4568999999974 332 222222221 1223444555555544443211 1
Q ss_pred HH---HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----HhHHHHHhhcCccee
Q 016612 253 RV---EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETTKYFSI 324 (386)
Q Consensus 253 ~~---~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l~~~gi 324 (386)
.. +...++.+.+.+.|++. +++.+. .+ ..+.++++.++.. ...+.+.+.+...|+
T Consensus 299 ~~~~~~~~~~~r~~~~~~L~~~--------------~~~~~~--~p-~~g~~l~~~~~~~~~~~~~~~~~~~~~l~~~gv 361 (404)
T PRK09265 299 LILPGGRLYEQRDRAWELLNAI--------------PGVSCV--KP-KGALYAFPKLDPKVYPIHDDEQFVLDLLLQEKV 361 (404)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC--------------CCCccc--CC-CcceEEEEEecccccCCCCHHHHHHHHHHhCCE
Confidence 11 12233333333444322 222211 11 2245666666432 234456667777788
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
.+.+|..+. ...++++|++++. +.+++.+++|+++++..
T Consensus 362 ~v~pg~~F~---------------------~~~~~~~Ri~~~~~~e~l~~~l~rl~~~l~~~ 402 (404)
T PRK09265 362 LLVQGTGFN---------------------WPEPDHFRIVTLPRVDDLEEAIGRIGRFLSGY 402 (404)
T ss_pred EEECchhhC---------------------CCCCCeEEEEeCCCHHHHHHHHHHHHHHHHHh
Confidence 877776521 0135789999963 67888888888888653
No 104
>PRK06425 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.4e-26 Score=213.01 Aligned_cols=276 Identities=14% Similarity=0.152 Sum_probs=181.7
Q ss_pred CCCchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 52 SGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 52 ~g~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
++++...++++.+++++|.+ ..|++++|+ +++..+..++++|+ |++++|+|+.+. .+++..|.+++.++.+
T Consensus 37 Yp~~~~~~lr~~ia~~~~~~~~~I~it~Gs~~~l~~~~~~~~~~~-vv~~~P~y~~y~----~~~~~~G~~v~~vp~~~~ 111 (332)
T PRK06425 37 YPEISYTDIEDQIKIYTQGLKIKVLIGPGLTHFIYRLLSYINVGN-IIIVEPNFNEYK----GYAFTHGIRISALPFNLI 111 (332)
T ss_pred CcCcCHHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhCCCc-EEEeCCChHHHH----HHHHHcCCeEEEEeCCcc
Confidence 34456889999999999887 556666665 88886666778875 666699998885 6677889999999874
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---C----CCCCCccEEE
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---R----PLELGADIVM 195 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---~----~~~~~~di~~ 195 (386)
|.+.++ ..+++++++++||||||.+.+ +++|.++|+++|++||+||+|..-... . ....+..+++
T Consensus 112 ~~~~~~l~---~~~~k~v~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~DE~Y~~~~~~~~~~~~~~~~~~~~vi~~ 188 (332)
T PRK06425 112 NNNPEILN---NYNFDLIFIVSPDNPLGNLISRDSLLTISEICRKKGALLFIDEAFIDFVPNRAEEDVLLNRSYGNVIIG 188 (332)
T ss_pred cCcHHHHh---hcCCCEEEEeCCCCCcCCccCHHHHHHHHHHHHHcCCEEEEecchhccccccchhHHHHhccCCCEEEE
Confidence 333333 248899999999999999987 677888889999999999998633221 0 0122568999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhc-CCcH-HHHHHHHHHHHHHHHHHHhhCCC
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG-VKTM-ALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
+||||.+ |.+|+|+||++++ +++.+.+...... ...+.....++... ...+ ....+.+.++.+.+.+.|++..
T Consensus 189 ~SfSK~~-~l~GlRiGy~v~~-~~li~~l~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~r~~l~~~L~~~g- 263 (332)
T PRK06425 189 RSLTKIL-GIPSLRIGYIATD-DYNMKISRKITEP--WSVCDPAIDFIRSIDLDYVAKHSLDIMENERSYLINNLEAMG- 263 (332)
T ss_pred eecHHhc-CCchhhheeeecC-HHHHHHHHHcCCC--CccCHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHCC-
Confidence 9999999 6568999999987 4465555443221 22233222222111 1111 1122333344444444444321
Q ss_pred cceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
..++ ....++++++.++ ....+.+.+...|+.+.+|..+.
T Consensus 264 --------------~~~~---~~~~g~f~~~~~~---~~~~~~~~l~~~gi~v~~~~~f~-------------------- 303 (332)
T PRK06425 264 --------------FRAA---GDPSANFITFMIP---DAHDFYSYLLKNGILVRLLDDYE-------------------- 303 (332)
T ss_pred --------------CEEC---CCCCceEEEEEcC---CHHHHHHHHHHCCeEEEECCCCC--------------------
Confidence 1111 0124678888875 24566667666788887776421
Q ss_pred cCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 016612 354 RGLTEDLVRISVGI-EDVNDLISDLDKAL 381 (386)
Q Consensus 354 ~~~~~~~iRis~~~-~~~~~~i~~l~~~l 381 (386)
+.+++++|||++. ++++.+++.|++.+
T Consensus 304 -~~~~~~iRis~~~~~~~~~l~~al~~~~ 331 (332)
T PRK06425 304 -CLGEQYIRIAIRRRSFNIKLVNALRNFL 331 (332)
T ss_pred -CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 1135789999974 88999999988765
No 105
>PRK08175 aminotransferase; Validated
Probab=99.95 E-value=5.1e-26 Score=214.32 Aligned_cols=296 Identities=16% Similarity=0.138 Sum_probs=194.6
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHH-HHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt-~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
....|.+. |.+ +++++.+++.+.+|. ++.+++++|+ ++++. +..+++|||+|++++|+|+.+.. .++.
T Consensus 59 ~~~~Y~~~~G~~~lr~aia~~~~~~~g~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~Vlv~~P~y~~~~~----~~~~ 134 (395)
T PRK08175 59 DTHGYSTSRGIPRLRRAISRWYQDRYDVDIDPESEAIVTIGSKEGLAHLMLATLDHGDTVLVPNPSYPIHIY----GAVI 134 (395)
T ss_pred CcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEccCcHHHHHHHHHHhCCCCCEEEEcCCCCcchHH----HHHH
Confidence 34678877 876 899999998876554 2246666665 88874 45678999999999999998753 3456
Q ss_pred CCcEEEEeCCC----CHHHHHhhhC---CCceEEEEeCCCCCCcccccH---HHHHHHHHHcCCEEEEeCCCCCCCc---
Q 016612 117 TGVVVKRVNTC----DLDEVASAIG---PWTKLVWVESPTNPRQQICDI---RKIAEMAHAHGALLLVDNSIMSPVL--- 183 (386)
Q Consensus 117 ~g~~~~~v~~~----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~l---~~i~~la~~~~~~li~D~a~~~~~~--- 183 (386)
.|.+++.++.+ +.+++++.++ ++++++++++|+||||.+.+. ++|.++|+++|+++|+||+|....+
T Consensus 135 ~g~~~~~v~~~~~~~~~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~a~~~~i~ii~De~y~~l~~~~~ 214 (395)
T PRK08175 135 AGAQVRSVPLVEGVDFFNELERAIRESYPKPKMMILGFPSNPTAQCVELEFFEKVVALAKRYDVLVVHDLAYADIVYDGW 214 (395)
T ss_pred cCCeEEEEecccCCCcHHHHHHHHhhccCCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchHhhccCCC
Confidence 78888888764 4677887775 478999999999999999975 7899999999999999999853221
Q ss_pred --cCCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHH
Q 016612 184 --SRPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALR 253 (386)
Q Consensus 184 --~~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 253 (386)
.... ..+..+++.|+||.+ |.+|+|+||++++ +++.+.+.........+.+...+.++...+.. +...
T Consensus 215 ~~~~~~~~~~~~~~~i~~~S~SK~~-g~pGlRiG~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 292 (395)
T PRK08175 215 KAPSIMQVPGAKDVAVEFFTLSKSY-NMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDI 292 (395)
T ss_pred CCcchhcCCCcccCEEEEeeccccc-cCcchhheeeeCC-HHHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcHHHHHHH
Confidence 1111 123467899999999 4568999999986 55666665555433333334344333333322 2222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHH---hHHHHHhhc-CcceeccCCC
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA---LSKHVVETT-KYFSITVSFG 329 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l-~~~gi~~~~G 329 (386)
.+.+.++.+.+.+.|++.. + .+. . ...|.++++.+++.. ....+.+.+ +..|+.+.+|
T Consensus 293 ~~~~~~~~~~~~~~L~~~~---------~------~~~--~-p~~g~~i~i~l~~~~~~~~~~~~~~~l~~~~gv~v~p~ 354 (395)
T PRK08175 293 AEQYKRRRDVLVKGLHEAG---------W------MVE--M-PKASMYVWAKIPEPYAAMGSLEFAKKLLNEAKVCVSPG 354 (395)
T ss_pred HHHHHHHHHHHHHHHHHcC---------C------ccc--C-CCEEEEEEEECCcccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 3334444445555555321 1 110 1 223678888875431 245555543 4568877776
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcCC
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTGP 385 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~~ 385 (386)
..+. ..+++++||+++. +.+.+.++.|.+.+++.+
T Consensus 355 ~~f~---------------------~~~~~~lRis~~~~~~~~~~al~~l~~~l~~~~ 391 (395)
T PRK08175 355 IGFG---------------------DYGDTHVRFALIENRDRIRQAIRGIKAMFRADG 391 (395)
T ss_pred hhhC---------------------cCCCCeEEEEeCCCHHHHHHHHHHHHHHHHhcC
Confidence 5421 1135689999973 556667777777776643
No 106
>PRK09082 methionine aminotransferase; Validated
Probab=99.95 E-value=4.1e-26 Score=214.31 Aligned_cols=279 Identities=18% Similarity=0.134 Sum_probs=185.1
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCc-HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTS-GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~-gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +++++.+++.+.+|.+ +.+++++ +++++. ++..++++||+|++++|.|+.+. ..++..
T Consensus 60 ~~~Y~~~~G~~~lr~~~a~~l~~~~~~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~ 135 (386)
T PRK09082 60 HNQYPPMTGVAALREAIAAKTARLYGRQYDADSEITVTAGATEALFAAILALVRPGDEVIVFDPSYDSYA----PAIELA 135 (386)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCCchhhH----HHHHHc
Confidence 4567766 776 7999999999887763 2455554 568886 55667899999999999999885 444567
Q ss_pred CcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 118 GVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 118 g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
|.+++.++.+ |++++++.++++++++++++|+||||.++ ++++|.++|+++|+++|+|++|+...+.
T Consensus 136 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~i~li~De~y~~~~~~~~~~ 215 (386)
T PRK09082 136 GGRAVRVALQPPDFRVDWQRFAAAISPRTRLIILNTPHNPSGTVWSAADMRALWQLIAGTDIYVLSDEVYEHIVFDGAGH 215 (386)
T ss_pred CCEEEEEecCcccccCCHHHHHHhcCccceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHCCEEEEEehhhhhhccCCCCC
Confidence 8888888763 78899999988999999999999999986 5888999999999999999998632221
Q ss_pred -CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC----cHHHHHH
Q 016612 185 -RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRVE 255 (386)
Q Consensus 185 -~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 255 (386)
... ..+.++++.|+||.+ |.+|+|+||++++ +++.+.+...........+...+.++...+. .......
T Consensus 216 ~s~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~iv~~-~~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~ 293 (386)
T PRK09082 216 ASVLRHPELRERAFVVSSFGKTY-HVTGWKVGYCVAP-AALSAEFRKVHQYNTFTVNTPAQLALADYLRAEPEHYLELPA 293 (386)
T ss_pred CChhhCcCccCcEEEEeechhhc-cchhhhhhhhhCC-HHHHHHHHHHHhhhcCCCChHHHHHHHHHHhCChHHHHHHHH
Confidence 111 124679999999999 5568999999987 5566656555543334445555544433332 1122233
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhc-CcceeccCCCCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETT-KYFSITVSFGSVK 332 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l-~~~gi~~~~G~~~ 332 (386)
.+.++.+.+.+.|++. ++. +. . ...+.++++.+++ ......+.+.+ ...++.+.+|..+
T Consensus 294 ~~~~~~~~~~~~L~~~---------~~~------~~--~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~~v~v~pg~~f 355 (386)
T PRK09082 294 FYQAKRDRFRAALANS---------RFK------LL--P-CEGTYFQLVDYSAISDLDDVEFCQWLTREHGVAAIPLSVF 355 (386)
T ss_pred HHHHHHHHHHHHHHhC---------CCc------cc--C-CCeeEEEEEeccccCCCCHHHHHHHHHHhCCEEEeCcHHh
Confidence 3445555555555532 111 11 1 1123445556642 12244555543 5567777776642
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 367 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 367 (386)
... +...+++|||++.
T Consensus 356 ~~~-------------------~~~~~~~Ri~~~~ 371 (386)
T PRK09082 356 YAD-------------------PFPHRLVRLCFAK 371 (386)
T ss_pred CCC-------------------CCCCCEEEEEecC
Confidence 100 1135789999986
No 107
>PRK00950 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.1e-26 Score=216.68 Aligned_cols=313 Identities=18% Similarity=0.252 Sum_probs=201.4
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEe-CcHH-HHHHHH-H
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCF-TSGM-AALAAV-T 87 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~-~~gt-~al~~~-~ 87 (386)
.+++++.+.+++|. +|... ..+.. ... ....|... ...++++.+++++|.+ +.+++ ++|+ +++..+ .
T Consensus 35 ~~i~l~~~~~~~~~--~~~~~-~~~~~-~~~--~~~~y~~~---~~~~lr~~ia~~~~~~~~~i~~~~~Ga~~~i~~~~~ 105 (361)
T PRK00950 35 SIIKLGSNENPLGP--SPKAV-EAIEK-ELS--KIHRYPEP---DAPELREALSKYTGVPVENIIVGGDGMDEVIDTLMR 105 (361)
T ss_pred ceEEccCCCCCCCC--CHHHH-HHHHH-HHH--hhcCCCCC---CHHHHHHHHHHHhCCCHHHEEEeCCCHHHHHHHHHH
Confidence 77889855566773 22221 11111 011 11234332 3477888888888875 44444 7786 667654 4
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
.++++||.|++++|.|+.+. ..++..|++++.++.+ |++++++.++++++++++++|+||||.+.+.+++.
T Consensus 106 ~~~~~gd~vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~ 181 (361)
T PRK00950 106 TFIDPGDEVIIPTPTFSYYE----ISAKAHGAKPVYAKREEDFSLDVDSVLNAITEKTKVIFLCTPNNPTGNLIPEEDIR 181 (361)
T ss_pred HhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCcCHHHHHHHhccCCCEEEEeCCCCCCCCCcCHHHHH
Confidence 56789999999999997764 4456788988888642 68899998888899999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCCCCccC--C--CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChh
Q 016612 163 EMAHAHGALLLVDNSIMSPVLSR--P--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 238 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~~~~~~~--~--~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (386)
++|+++|+++|+|++|....... . ...+..++++|+||.+ |.+|+|+||++++ +.+.+.+...... ...+..
T Consensus 182 ~l~~~~~~~li~De~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRiG~~~~~-~~~~~~~~~~~~~--~~~~~~ 257 (361)
T PRK00950 182 KILESTDALVFVDEAYVEFAEYDYTPLALEYDNLIIGRTFSKVF-GLAGLRIGYGFVP-EWLIDYYMRAKTP--FSLTRL 257 (361)
T ss_pred HHHHHCCcEEEEECchhhhCccchHHHHHhcCCEEEEEeehHhh-cCchhhcchhcCC-HHHHHHHHHhcCC--CCCCHH
Confidence 99999999999999986322111 1 1224568899999999 5568999999986 4455545444332 234455
Q ss_pred hHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhh
Q 016612 239 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVET 318 (386)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (386)
.+..+...+... ...++..+..+...+.+.+. +. ..++ ...++++++.++. ....++.+.
T Consensus 258 ~~~~a~~~l~~~-~~~~~~~~~~~~~r~~l~~~----------l~----~~~~----~~~~~~i~~~~~~-~~~~~~~~~ 317 (361)
T PRK00950 258 SQAAAIAALSDK-EYIEKSIEHGIKSREYLYNE----------LP----FKVY----PSEANFVLVDVTP-MTAKEFCEE 317 (361)
T ss_pred HHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHhh----------cC----eeEC----CCcceEEEEECCC-CCHHHHHHH
Confidence 555555555432 12233333333333433322 11 0111 1245778887743 235667777
Q ss_pred cCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 016612 319 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 382 (386)
Q Consensus 319 l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 382 (386)
+...|+.+.+|..+. +.+++++|+|++. ++++++++.|+++++
T Consensus 318 l~~~gv~v~~~~~f~---------------------~~~~~~lRis~~~~~~~~~l~~~L~~il~ 361 (361)
T PRK00950 318 LLKRGVIVRDCTSFR---------------------GLGDYYIRVSIGTFEENERFLEILKEIVE 361 (361)
T ss_pred HHHCCEEEeeCCccC---------------------CCCCCeEEEECCCHHHHHHHHHHHHHHhC
Confidence 767788777654311 1135789999974 667788888877653
No 108
>PRK02731 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=1.7e-26 Score=215.77 Aligned_cols=276 Identities=17% Similarity=0.228 Sum_probs=190.5
Q ss_pred HHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----CHH
Q 016612 58 DALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLD 130 (386)
Q Consensus 58 ~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~ 130 (386)
.++++.++++++.+ +.|++++|+ +++..+ ..++++||.|++++|.|..+. ..++..|.+++.++.+ |++
T Consensus 70 ~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~ 145 (367)
T PRK02731 70 FELKAALAEKFGVDPERIILGNGSDEILELLARAYLGPGDEVIYSEHGFAVYP----IAAQAVGAKPVEVPAKDYGHDLD 145 (367)
T ss_pred HHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEecCCHHHHH----HHHHHcCCeEEEecccCCCCCHH
Confidence 57888888888876 566777776 777754 557899999999999997664 3345688999888764 789
Q ss_pred HHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCccC-------CC-CCCccEEEecccc
Q 016612 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLSR-------PL-ELGADIVMHSATK 200 (386)
Q Consensus 131 ~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~~-------~~-~~~~di~~~S~sK 200 (386)
++++.+++++++|++++|+||||.+.+.+++.++++.. |+++|+|++|....... .. .....++++|+||
T Consensus 146 ~l~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK 225 (367)
T PRK02731 146 AMLAAVTPRTRLVFIANPNNPTGTYLPAEEVERFLAGVPPDVLVVLDEAYAEYVRRKDYEDGLELVAKFPNVVVTRTFSK 225 (367)
T ss_pred HHHHHhCCCCcEEEEeCCCCCCCcCCCHHHHHHHHHhCCCCcEEEEECcHHHhccCcCcccHHHHHhhcCCEEEEeeehH
Confidence 99999988999999999999999999999999998875 89999999986332211 01 1245788999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH---HHHHHHHHHHHHHHHHHhhCCCcceE
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKV 277 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~ 277 (386)
.+ |.+|+|+||+++++ ++.+.+...... ...+...+.++...++... .......++.+.+.+.+++.
T Consensus 226 ~~-g~~G~RiG~l~~~~-~~~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~------ 295 (367)
T PRK02731 226 AY-GLAGLRVGYGIAPP-EIIDALNRVRQP--FNVNSLALAAAVAALDDDAFVEKSRALNAEGMAWLTEFLAEL------ 295 (367)
T ss_pred hh-cCcccceeeeeCCH-HHHHHHHHccCC--CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHC------
Confidence 98 56689999999874 455555443322 2345555666555554321 11222223333333444332
Q ss_pred ecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCC
Q 016612 278 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT 357 (386)
Q Consensus 278 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~ 357 (386)
++ .+. ...++++++.+++.....++.+.+..+|+.++++..+ + .
T Consensus 296 ---g~------~~~----~~~g~~~~i~~~~~~~~~~~~~~L~~~gI~v~~~~~~----------------------~-~ 339 (367)
T PRK02731 296 ---GL------EYI----PSVGNFILVDFDDGKDAAEAYQALLKRGVIVRPVAGY----------------------G-L 339 (367)
T ss_pred ---CC------ccC----CCCceEEEEECCCCCCHHHHHHHHHHCCEEEEeCCCC----------------------C-C
Confidence 11 111 1246888988854444667777777788887765431 1 1
Q ss_pred CCeEEEEecc-CChHHHHHHHHHHHhc
Q 016612 358 EDLVRISVGI-EDVNDLISDLDKALRT 383 (386)
Q Consensus 358 ~~~iRis~~~-~~~~~~i~~l~~~l~~ 383 (386)
+++||+|++. ++++.+++.|++++++
T Consensus 340 ~~~iRis~~~~~e~~~l~~aL~~~~~~ 366 (367)
T PRK02731 340 PNALRITIGTEEENRRFLAALKEFLAA 366 (367)
T ss_pred CCeEEEecCCHHHHHHHHHHHHHHHhc
Confidence 4679999974 7888888888888765
No 109
>PRK10874 cysteine sulfinate desulfinase; Provisional
Probab=99.95 E-value=4.4e-26 Score=215.44 Aligned_cols=295 Identities=21% Similarity=0.264 Sum_probs=191.2
Q ss_pred hHHHHHHHHHhhcCC-C-ceEEeCc-HHHHHHHHHH-h----cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKA-D-RALCFTS-GMAALAAVTH-L----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~-~-~~i~~~~-gt~al~~~~~-~----~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
..+++++.+++++|. + +.|++++ +|++++.+.. + +++||+|++++++|++....|...++..|++++.++.+
T Consensus 64 ~~~~~r~~la~~~g~~~~~~i~~~~~~t~~i~~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 143 (401)
T PRK10874 64 RYEAAREQVAQLLNAPDAKNIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLVPWLMVAQQTGAKVVKLPLG 143 (401)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHhhhccCCCcCEEEECCcchHHHHHHHHHHHHHhCCEEEEEecC
Confidence 577889999999998 4 4555554 4699875543 4 47999999999999987666677778899999988753
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+.+... +....+.|++++|+||+
T Consensus 144 ~~~~~d~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~l~~~~g~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 223 (401)
T PRK10874 144 ADRLPDVDLLPELITPRTRILALGQMSNVTGGCPDLARAITLAHQAGMVVMVDGAQGAVHFPADVQALDIDFYAFSGHKL 223 (401)
T ss_pred CCCcCCHHHHHHhcCcCcEEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEECCcccccccCCchhcCCCEEEEecccc
Confidence 789999999999999999999999999999999999999999999999999876653 33345799999999997
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhh--------------------cCCCCCh-hhHHHHHhcCCcHHHH-HHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAP-FDCWICLRGVKTMALR-VEKQQD 259 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--------------------~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 259 (386)
+ ||+| .|+++++++ +.+.+..+... ...+..+ .....+..+++.+... ..+..+
T Consensus 224 ~-gp~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gt~~~~~~~al~~al~~l~~~g~~~~~~ 299 (401)
T PRK10874 224 Y-GPTG--IGVLYGKSE-LLEAMSPWQGGGKMLTEVSFDGFTPQSAPWRFEAGTPNVAGVIGLSAALEWLADIDINQAES 299 (401)
T ss_pred c-CCCc--cEEEEEchH-HHhcCCCeecCCcceEeeccCccCCCCChhhccCCCcCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 6 6777 599998754 43333221100 0011111 1222222333222111 111223
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
+...+.+++.+ ++..+++..++. ...+++++|.+++.. .+++.+.|...|+.++.|..+. .+
T Consensus 300 ~~~~l~~~l~~----------~l~~~~g~~~~~---~~~~~i~~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~---~~- 361 (401)
T PRK10874 300 WSRSLATLAED----------ALAKLPGFRSFR---CQDSSLLAFDFAGVH-HSDLVTLLAEYGIALRAGQHCA---QP- 361 (401)
T ss_pred HHHHHHHHHHH----------HHhcCCCEEEeC---CCCCcEEEEEECCcC-HHHHHHHHHHCCcEEeccccch---HH-
Confidence 33333333322 122222322221 113568888876533 4567777777899888776422 00
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.....+. .++||+|++. ++++.+++.|+++++.
T Consensus 362 ----------~~~~~g~-~~~iRiS~~~~nt~edid~ll~al~~~~~~ 398 (401)
T PRK10874 362 ----------LLAALGV-TGTLRASFAPYNTQSDVDALVNAVDRALEL 398 (401)
T ss_pred ----------HHHHhCC-CCEEEEEecccCCHHHHHHHHHHHHHHHHH
Confidence 0111121 4689999985 5566666666555544
No 110
>PRK05839 hypothetical protein; Provisional
Probab=99.95 E-value=4.5e-26 Score=212.94 Aligned_cols=289 Identities=15% Similarity=0.094 Sum_probs=179.7
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC--C-ceEEeCcHH-HHHHHHHH-hc--CCCCEEEecCCCCCcHHHHHhhhcc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA--D-RALCFTSGM-AALAAVTH-LL--GTGEEIVAGDDLYGGTDRLLSRVTP 115 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~--~-~~i~~~~gt-~al~~~~~-~~--~~g~~Vlv~~~~~~~~~~~~~~~~~ 115 (386)
....|++. |.+ +++++.+++++.+|. + +.|++++|+ +++..+.. ++ ++||.|+++.|+|+.+. ..++
T Consensus 52 ~~~~Y~~~~G~~~lr~aia~~l~~~~g~~~~~~~I~it~G~~~al~~~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~ 127 (374)
T PRK05839 52 LLNKYPKSAGEESLREAQRGFFKRRFKIELKENELIPTFGTREVLFNFPQFVLFDKQNPTIAYPNPFYQIYE----GAAI 127 (374)
T ss_pred ccCCCCCCCCCHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHHhcCCCCCEEEECCCCchhhH----HHHH
Confidence 35678877 875 899999999988773 2 566666665 88875544 43 57999999999999886 4456
Q ss_pred cCCcEEEEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCC----c
Q 016612 116 KTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV----L 183 (386)
Q Consensus 116 ~~g~~~~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~----~ 183 (386)
..|++++.++.+ +++..+..+ ++++++++++||||||.+++ +++|+++|+++|++||+||+|..-. .
T Consensus 128 ~~g~~v~~v~~~~~~~~~~d~~~~~~-~~~k~v~i~nP~NPTG~~~s~~~l~~i~~~~~~~~~~ii~DE~Y~~~~~~~~~ 206 (374)
T PRK05839 128 ASRAKVLLMPLTKENDFTPSLNEKEL-QEVDLVILNSPNNPTGRTLSLEELIEWVKLALKHDFILINDECYSEIYENTPP 206 (374)
T ss_pred hcCCEEEEeecccccCCcCCcchhhh-ccccEEEEeCCCCCcCcccCHHHHHHHHHHHHHcCCEEEeccchhhcccCCCC
Confidence 889999998864 112212222 47999999999999999986 6788888999999999999986321 1
Q ss_pred cCC---------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHH
Q 016612 184 SRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRV 254 (386)
Q Consensus 184 ~~~---------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (386)
... ...+..+++.|+||.+ +.+|+|+||++++ +.+.+.+...........+...+.++...+.. ....
T Consensus 207 ~s~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~ii~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~-~~~~ 283 (374)
T PRK05839 207 PSLLEASILVGNESFKNVLVINSISKRS-SAPGLRSGFIAGD-ASILKKYKAYRTYLGCASPLPLQKAAAVAWLD-DEHA 283 (374)
T ss_pred CCHhhhhcccCccccCcEEEEecccccc-CCccceeEEEecC-HHHHHHHHHHHhhcCCCCChHHHHHHHHHhcc-chHH
Confidence 111 1124679999999998 5568999999986 55655555444333334444444444333321 1111
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKS 333 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~ 333 (386)
++..+..+.-.+.+.+. + +.. . +..+.++++.+++. ..+.+++. ..|+.+.+|..+.
T Consensus 284 ~~~~~~~~~~~~~~~~~------l--~~~----------~-p~gg~fi~~~~~~~---~~~~~~l~~~~gi~v~pg~~f~ 341 (374)
T PRK05839 284 EFFRNIYAKNLKLAREI------L--GIT----------I-PPATFYVWLPVDND---EEFTKKLYQNEGIKVLPGSFLG 341 (374)
T ss_pred HHHHHHHHHHHHHHHHh------c--CCC----------C-CCeeEEEEEeCCCh---HHHHHHHHHHCCEEEeCchhhC
Confidence 11111111112222211 0 110 1 22367777777532 34555553 3677777765421
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
.+ +..++++|||++. +++.+.+++|++.++
T Consensus 342 ---~~----------------~~~~~~iRis~~~~~~~~~~~l~~l~~~l~ 373 (374)
T PRK05839 342 ---RN----------------GIGKGYVRIALVYDTPKLEKALEIIKTYLE 373 (374)
T ss_pred ---CC----------------CCCCCeEEEEecCCHHHHHHHHHHHHHHhh
Confidence 00 1136889999974 445555666665553
No 111
>PRK08056 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=4.2e-26 Score=211.92 Aligned_cols=277 Identities=15% Similarity=0.160 Sum_probs=185.1
Q ss_pred HHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CH
Q 016612 57 RDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL 129 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~ 129 (386)
...+++.++++++.+ +.|++++|+ +++..+...+.+|+ +++..|.|..+. ..++..|.+++.++.+ ++
T Consensus 57 ~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~l~~g~-viv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~ 131 (356)
T PRK08056 57 YRHLHQALARHHQVPASWILAGNGETESIFAVVSGLKPRR-AMIVTPGFAEYR----RALQQVGCEIRRYSLREADGWQL 131 (356)
T ss_pred HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhCCCC-EEEeCCCcHHHH----HHHHHcCCeEEEEecccccCCCc
Confidence 567777788888776 556666665 88876665567876 677789998774 5567889999988753 22
Q ss_pred -HHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc------CCCCCCccEEEeccc
Q 016612 130 -DEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELGADIVMHSAT 199 (386)
Q Consensus 130 -~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~------~~~~~~~di~~~S~s 199 (386)
+++.+.+.++++++++++|+||||.+.+ +++|+++|++++++||+|++|..-... .....+.++++.|+|
T Consensus 132 ~~~~~~~~~~~~k~v~l~~p~NPTG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~i~~~S~S 211 (356)
T PRK08056 132 TDAILEALTPDLDCLFLCTPNNPTGLLPERQLLQAIAERCKSLNIALILDEAFIDFIPDETGFIPQLADNPHLWVLRSLT 211 (356)
T ss_pred cHHHHHhccCCCCEEEEeCCcCCCCCCCCHHHHHHHHHHHHhcCCEEEEecchhccCCcchHHHHHhccCCCEEEEEech
Confidence 3555666788999999999999999998 788999999999999999997532211 111235789999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcce
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKK 276 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~ 276 (386)
|++ +.+|+|+||++++++.+.+.+.... .....+...+.++...++.- ....+.+.++.+.+.+.+++.+
T Consensus 212 K~~-~~~G~RiG~~v~~~~~~~~~l~~~~--~~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~~---- 284 (356)
T PRK08056 212 KFY-AIPGLRLGYLVNSDDAAVARMRRQQ--MPWSINAFAALAGEVILQDRAYQQATWQWLAEEGARFYQALCALP---- 284 (356)
T ss_pred hhc-cCcchhheeeecCCHHHHHHHHHhC--CCCchhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCC----
Confidence 999 6668999999986555555444322 22334445555544444321 1112334444444555554322
Q ss_pred EecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 277 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 277 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+..++ +..++++++.++.. ...+.+.+...|+.+++|..+. +.
T Consensus 285 ----------~~~~~----~~~~~~~~~~~~~~--~~~~~~~l~~~gI~v~~~~~f~---------------------~~ 327 (356)
T PRK08056 285 ----------LLTVW----PGRANYLFLRCERP--DIDLQRALLTQRILIRSCANYP---------------------GL 327 (356)
T ss_pred ----------CcEEc----CCCCcEEEEEcCCC--hHHHHHHHHHCCeEEEECCCCC---------------------CC
Confidence 22221 12467778877532 3456666666788877776421 12
Q ss_pred CCCeEEEEecc-CChHHHHHHHHHHHh
Q 016612 357 TEDLVRISVGI-EDVNDLISDLDKALR 382 (386)
Q Consensus 357 ~~~~iRis~~~-~~~~~~i~~l~~~l~ 382 (386)
.+++|||+++. ++++.+++.|++.++
T Consensus 328 ~~~~iRis~~~~~~~~~l~~~l~~~~~ 354 (356)
T PRK08056 328 DSRYYRVAIRSAAENERLLAALRNVLT 354 (356)
T ss_pred CCCEEEEEEcCHHHHHHHHHHHHHHHc
Confidence 35789999975 888999999988765
No 112
>PLN02231 alanine transaminase
Probab=99.95 E-value=1.9e-26 Score=222.22 Aligned_cols=180 Identities=19% Similarity=0.226 Sum_probs=135.5
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcH-HHHHHHHHH-hc-CCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSG-MAALAAVTH-LL-GTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~g-t~al~~~~~-~~-~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|+.. |.+ +|+++.+++.+..|.+ +.|++++| ++++..++. ++ .+||.|+++.|.|+.+. ..++..
T Consensus 161 ~~~Y~~s~G~~~lReaIA~~~~~r~g~~~~pe~I~iT~Ga~~ai~~~~~~l~~~~gd~Vli~~P~Y~~y~----~~~~~~ 236 (534)
T PLN02231 161 TGAYSHSQGIKGLRDAIAAGIEARDGFPADPNDIFLTDGASPAVHMMMQLLIRSEKDGILCPIPQYPLYS----ASIALH 236 (534)
T ss_pred ccCcCCCCCcHHHHHHHHHHHHhccCCCCCcccEEEeCCHHHHHHHHHHHhccCCCCEEEEeCCCChhHH----HHHHHc
Confidence 4669988 887 8999999998876642 44555555 599986554 55 47999999999999886 455677
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCC------CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
|.+++.++.+ |+++|++.+++ +++++++++|+||||.+++ +++|+++|+++|++||+||+|..-
T Consensus 237 g~~~v~~~l~~~~~~~~d~~~Le~~l~~~~~~~~~~k~ivl~nP~NPTG~vls~e~l~~Iv~~a~~~~l~lI~DEvY~~l 316 (534)
T PLN02231 237 GGTLVPYYLDEATGWGLEISELKKQLEDARSKGITVRALVVINPGNPTGQVLAEENQRDIVEFCKQEGLVLLADEVYQEN 316 (534)
T ss_pred CCEEEEEecCcccCCCCCHHHHHHHHHHHhhcCCCeEEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhc
Confidence 8888887653 78899888754 6899999999999999985 788999999999999999998643
Q ss_pred Ccc------CCCC---------C-CccEEEeccccccccCCCceEEEEEEc--ChhHHHHHHHhhh
Q 016612 182 VLS------RPLE---------L-GADIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQN 229 (386)
Q Consensus 182 ~~~------~~~~---------~-~~di~~~S~sK~~~g~~g~~~G~i~~~--~~~~~~~~~~~~~ 229 (386)
.+. +... . ...+++.|+||.+.|.+|+|+||+++. ++.+.+.+.....
T Consensus 317 ~y~~~~~~~s~~~~~~~~g~~~~~~~vi~l~S~SK~~~g~pGlRiGy~~~~~~~~~l~~~l~k~~~ 382 (534)
T PLN02231 317 VYVPDKKFHSFKKVARSMGYGEKDISLVSFQSVSKGYYGECGKRGGYMEVTGFTSDVREQIYKVAS 382 (534)
T ss_pred ccCCCCCcccHHHHHhhhccccCCceEEEEeccCcccccCCccceEEEEEecCCHHHHHHHHHHHh
Confidence 321 1000 1 135788999998767778999999873 4556665544433
No 113
>TIGR03392 FeS_syn_CsdA cysteine desulfurase, catalytic subunit CsdA. Members of this protein family are CsdS. This protein, found Escherichia coli, Yersinia pestis, Photorhabdus luminescens, and related species, and related to SufS, works together with and physically interacts with CsdE (a paralog of SufE). CsdA has cysteine desulfurase activity that is enhanced by CsdE, a sulfur acceptor protein. This gene pair, although involved in FeS cluster biosynthesis, is not found next to other such genes as are its paralogs from the Suf or Isc systems.
Probab=99.95 E-value=5e-26 Score=214.90 Aligned_cols=295 Identities=18% Similarity=0.210 Sum_probs=190.0
Q ss_pred hHHHHHHHHHhhcCCC--ceEE-eCcHHHHHHHHH-Hh----cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKAD--RALC-FTSGMAALAAVT-HL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~-~~~gt~al~~~~-~~----~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
..+++++.+++++|.+ +.|+ ++++|++++.+. ++ +++||+|++++++|++....+...++..|++++.++.+
T Consensus 61 ~~~~~r~~la~~~g~~~~~~i~~t~g~t~~l~~~~~~~~~~~~~~gd~Vl~~~~~~~s~~~~~~~~~~~~g~~v~~v~~~ 140 (398)
T TIGR03392 61 RYELARQQVARFLNAPDAENIVWTRGTTESINLVAQSYARPRLQPGDEIIVSEAEHHANLIPWLMVAQQTGAKVVKLPIG 140 (398)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCChHHHHHHHHHHhhhccCCCCCEEEECCcchhHHHHHHHHHHHHcCcEEEEEecC
Confidence 4677889999999974 4555 445569987554 34 47999999999999886655667778899999998763
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|+++++++++++|++|++++++||||.+.|+++|.++|+++|+++++|++|+.+... +....+.|++++|+||.
T Consensus 141 ~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~ 220 (398)
T TIGR03392 141 ADLLPDIRQLPELLTPRTRILALGQMSNVTGGCPDLARAITLAHQYGAVVVVDGAQGVVHGPPDVQALDIDFYAFSGHKL 220 (398)
T ss_pred CCCCcCHHHHHHHhccCceEEEEECccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCCCCChhhcCCCEEEEecccc
Confidence 789999999999999999999999999999999999999999999999999876653 23345789999999997
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhh--------------------cCCCCChh-hHHHHHhcCCcHHH-HHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAPF-DCWICLRGVKTMAL-RVEKQQD 259 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--------------------~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~ 259 (386)
+ ||+| +|+++++++ +.+.+...... ...+..+. ....+..+++.+.. -.+...+
T Consensus 221 ~-gp~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~GT~~~~~~~a~~~al~~l~~~g~~~i~~ 296 (398)
T TIGR03392 221 Y-GPTG--IGVLYGKTE-LLEAMPPWQGGGKMLSHVSFDGFIPQAVPHRFEAGTPNIAGVIGLSAALEWLTDIDIAAAEA 296 (398)
T ss_pred c-CCCc--eEEEEEcHH-HHhhCCCeecCCceEeeccccccccCCChhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 6 6777 799998754 44333221100 00111111 22222222222111 0112223
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
+...+.+++.+ .+..++++.++.. ...++++|.+++.. .+.+.+.+..+||.++.|..++. +
T Consensus 297 ~~~~l~~~l~~----------~l~~l~g~~~~~~---~~~~i~~~~~~~~~-~~~l~~~L~~~gI~v~~g~~~~~---~- 358 (398)
T TIGR03392 297 WSVSLADLAEE----------RLAQLPGFRSFRC---PGSSLLAFDFAGVH-HSDLAALLAESGIALRAGQHCAQ---P- 358 (398)
T ss_pred HHHHHHHHHHH----------HHhcCCCeEEeCC---CCCcEEEEEeCCcC-HHHHHHHHHhCCEEEecCccchH---H-
Confidence 33333333332 1222222222211 13468888876533 45677777788998887765220 0
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.....+. +++||+|++. ++++.+++.|++++++
T Consensus 359 ----------~~~~~g~-~~~iRvS~~~~~t~~ei~~l~~~l~~~~~~ 395 (398)
T TIGR03392 359 ----------LMAALGV-SGTLRASFAPYNTQQDVDALVDAVGAALEL 395 (398)
T ss_pred ----------HHHHhCC-CCEEEEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 1111121 4689999975 5566666666555544
No 114
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=99.95 E-value=2.3e-25 Score=195.35 Aligned_cols=298 Identities=20% Similarity=0.281 Sum_probs=213.5
Q ss_pred CCCCCccccCCCCchHHHHHHHHHhhcCCC---ceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 42 TENGPYDYTRSGNPTRDALESLLAKLDKAD---RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 42 ~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
.+.+.++|+.....+.+++.++.++.++.+ +.++++.|- -++. ++.++.++||.|++..|.|++.. ...+.
T Consensus 51 vdhGvfGY~~~~~~~~~ai~~w~~~r~~~~i~~e~i~~~p~VVpgi~~~I~~~T~~gd~Vvi~tPvY~PF~----~~i~~ 126 (388)
T COG1168 51 VDHGVFGYPYGSDELYAAIAHWFKQRHQWEIKPEWIVFVPGVVPGISLAIRALTKPGDGVVIQTPVYPPFY----NAIKL 126 (388)
T ss_pred HhcCCCCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEcCcchHhHHHHHHHhCcCCCeeEecCCCchHHH----HHHhh
Confidence 457889999334458999999999988764 567777675 8887 67778999999999999999886 56678
Q ss_pred CCcEEEEeCCC--------CHHHHHhhhC-CCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCcc
Q 016612 117 TGVVVKRVNTC--------DLDEVASAIG-PWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS 184 (386)
Q Consensus 117 ~g~~~~~v~~~--------d~~~l~~~~~-~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~ 184 (386)
.|.++...|.. |.++|++++. +++++++++|||||+|.+. .+++|.++|.+||+.||.||.|+.-.+.
T Consensus 127 n~R~~i~~pL~~~~~~y~iD~~~LE~~~~~~~vkl~iLCnPHNP~Grvwt~eeL~~i~elc~kh~v~VISDEIHaDlv~~ 206 (388)
T COG1168 127 NGRKVIENPLVEDDGRYEIDFDALEKAFVDERVKLFILCNPHNPTGRVWTKEELRKIAELCLRHGVRVISDEIHADLVLG 206 (388)
T ss_pred cCcEEEeccccccCCcEEecHHHHHHHHhcCCccEEEEeCCCCCCCccccHHHHHHHHHHHHHcCCEEEeeccccccccc
Confidence 88888888763 9999998887 5679999999999999997 4899999999999999999998732221
Q ss_pred ----------CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHH-HHHhhhhcCCCCChhhHHHHHh----cCCc
Q 016612 185 ----------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LYFLQNAEGSGLAPFDCWICLR----GVKT 249 (386)
Q Consensus 185 ----------~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~~ 249 (386)
++...+..+++.|.||+|+ .+|+.++.++..++.+..+ .+.+......+.+.+...+... +-.-
T Consensus 207 g~~h~~~a~ls~~~a~~~it~~saSKtFN-laGL~~a~~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~aAY~~G~~W 285 (388)
T COG1168 207 GHKHIPFASLSERFADNSITLTSASKTFN-LAGLKCAYIIISNRELRAKFLKRLKRNGLHGPSALGIIATEAAYNQGEPW 285 (388)
T ss_pred CCCccchhhcChhhhcceEEEeecccccc-chhhhheeEEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhchHH
Confidence 1112245699999999995 5689999999998887443 3444444444555554444333 3333
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe-----CCHHhHHHHHhhcCccee
Q 016612 250 MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-----GSLALSKHVVETTKYFSI 324 (386)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-----~~~~~~~~l~~~l~~~gi 324 (386)
+....+.+..|.+.+.+++.+.- |++.+.. |. .+++.|+.+ ++....+.++++.+ +
T Consensus 286 Ld~L~~yl~~N~~~~~~~l~~~~-------------P~v~v~~--p~-gTYL~WLD~r~l~l~d~~l~~~ll~~ak---V 346 (388)
T COG1168 286 LDELLEYLKDNRDYVADFLNKHL-------------PGVKVTE--PQ-GTYLAWLDCRELGLDDSELAEFLLEEAK---V 346 (388)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC-------------CCcEEec--CC-CceeeeeeccccCCChHHHHHHHHHhhc---E
Confidence 45555666677777777777542 2222221 12 255666654 33455556666654 5
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHhcC
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~~~ 384 (386)
..+.|..+. ..+.|++|++++ ....++.+++|.++|++.
T Consensus 347 al~~G~~FG---------------------~~g~gf~RlN~acpr~~L~eal~ri~~al~~~ 387 (388)
T COG1168 347 ALSPGSTFG---------------------EEGSGFVRLNFACPRAILEEALERLKRALKKR 387 (388)
T ss_pred eccCCCccC---------------------cCCCceEEEecCCCHHHHHHHHHHHHHHHhcc
Confidence 566665422 114689999995 589999999999998764
No 115
>PRK07337 aminotransferase; Validated
Probab=99.95 E-value=1.1e-25 Score=211.72 Aligned_cols=289 Identities=19% Similarity=0.173 Sum_probs=186.3
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|.+. |.+ +++++.+++.+.+|. ++.++++++++++. ++..++++||+|++++|+|+++. ..++..|
T Consensus 60 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g 135 (388)
T PRK07337 60 VTQYTSALGLAPLREAIAAWYARRFGLDVAPERIVVTAGASAALLLACLALVERGDEVLMPDPSYPCNR----HFVAAAE 135 (388)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCChHhEEEecCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcC
Confidence 4567766 766 788888888776664 24455555569987 44557899999999999999885 3345667
Q ss_pred cEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++++++|+||+|..-.+.
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~ 215 (388)
T PRK07337 136 GRPVLVPSGPAERFQLTAADVEAAWGERTRGVLLASPSNPTGTSIAPDELRRIVEAVRARGGFTIVDEIYQGLSYDAAPV 215 (388)
T ss_pred CEEEEeecCCccCCcCCHHHHHhhcCccceEEEEECCCCCCCcCcCHHHHHHHHHHHHHCCCEEEEeccccccccCCCCc
Confidence 788777652 688999999889999999999999999986 788899999999999999998632211
Q ss_pred CCCCC-CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHH
Q 016612 185 RPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQ 258 (386)
Q Consensus 185 ~~~~~-~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 258 (386)
..... +..+++.|+||.+ |.+|+|+||+++++ .+.+.+...........+...+.++...+.. +......+.
T Consensus 216 ~~~~~~~~vi~~~S~SK~~-~~~G~RiG~~~~~~-~l~~~l~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~ 293 (388)
T PRK07337 216 SALSLGDDVITINSFSKYF-NMTGWRLGWLVVPE-ALVGTFEKLAQNLFICASALAQHAALACFEPDTLAIYERRRAEFK 293 (388)
T ss_pred ChhhccCCEEEEEechhhc-CCchhheeeeecCH-HHHHHHHHHHHHhccCCChHHHHHHHHHhccCchHHHHHHHHHHH
Confidence 11122 2347789999999 55689999999874 4655565555444444555555554443321 222223333
Q ss_pred HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----HhHHHHHhh-cCcceeccCCCCcc
Q 016612 259 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVET-TKYFSITVSFGSVK 332 (386)
Q Consensus 259 ~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~-l~~~gi~~~~G~~~ 332 (386)
++.+.+.+.|++.. ..+. .. +..|.++++.++.. ....++.+. +...|+.+.+|..+
T Consensus 294 ~~r~~~~~~L~~~~---------------~~~~-~~-p~~g~f~~~~~~~~~~~~~~~~~~~~~~ll~~~gv~v~pg~~f 356 (388)
T PRK07337 294 RRRDFIVPALESLG---------------FKVP-VM-PDGAFYVYADCRGVAHPAAGDSAALTQAMLHDAGVVLVPGRDF 356 (388)
T ss_pred HHHHHHHHHHHhcC---------------Cccc-cC-CCeeEEEEEecccccCCCCCCHHHHHHHHHHhCCEEEeCchhh
Confidence 44444444444321 1100 01 12356777777431 124455544 45668877777653
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHH
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLD 378 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~ 378 (386)
.. ...++++||+++. +.+.+.+.++
T Consensus 357 ~~--------------------~~~~~~~Ri~~~~-~~~~l~~~l~ 381 (388)
T PRK07337 357 GP--------------------HAPRDYIRLSYAT-SMSRLEEAVA 381 (388)
T ss_pred CC--------------------CCCCCEEEEEecC-CHHHHHHHHH
Confidence 20 0125789999986 3444444443
No 116
>PRK07777 aminotransferase; Validated
Probab=99.95 E-value=6.8e-26 Score=213.09 Aligned_cols=294 Identities=19% Similarity=0.162 Sum_probs=187.5
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC-----ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +++++.+++.+.+|.+ +.+++++|++++. ++.+++++||+|+++.|.|+.+. .+++..
T Consensus 54 ~~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~i~~t~G~~~al~~~~~~~~~~gd~vli~~p~y~~~~----~~~~~~ 129 (387)
T PRK07777 54 VNQYPPGPGIPELRAAIAAQRRRRYGLEYDPDTEVLVTVGATEAIAAAVLGLVEPGDEVLLIEPYYDSYA----AVIAMA 129 (387)
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHHHHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHC
Confidence 3568776 776 7888888888777753 3455555568987 55668899999999999998875 444566
Q ss_pred CcEEEEeCC--------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC-
Q 016612 118 GVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR- 185 (386)
Q Consensus 118 g~~~~~v~~--------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~- 185 (386)
|.+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|.++|+++++++|+|++|....+..
T Consensus 130 g~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~~li~De~y~~~~~~~~ 209 (387)
T PRK07777 130 GAHRVPVPLVPDGRGFALDLDALRAAVTPRTRALIVNSPHNPTGTVLTAAELAAIAELAVEHDLLVITDEVYEHLVFDGA 209 (387)
T ss_pred CCEEEEeecCCccCCCcCCHHHHHHhcCcccEEEEEcCCCCCCCccCCHHHHHHHHHHHHhcCcEEEEeccchhcccCCC
Confidence 777777654 2778999988889999999999999999975 8899999999999999999986322110
Q ss_pred ---C----C-CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC----cHHHH
Q 016612 186 ---P----L-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALR 253 (386)
Q Consensus 186 ---~----~-~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 253 (386)
+ . ..+.++++.|+||.+ |.+|+|+||+++++ .+.+.+...........+...+.++...+. .....
T Consensus 210 ~~~~~~~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~-~l~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~ 287 (387)
T PRK07777 210 RHLPLATLPGMRERTVTISSAAKTF-NVTGWKIGWACGPA-PLIAAVRAAKQYLTYVGGAPFQPAVAHALDHEDAWVAAL 287 (387)
T ss_pred CcccHhhCCCCcCcEEEEeechhhc-cCcCceeEEEecCH-HHHHHHHHHHhhcccCCCCHHHHHHHHHHhCCcHHHHHH
Confidence 1 1 135689999999999 54589999999874 455545444432222223333333322221 12222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhcC-cceeccCCCC
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTK-YFSITVSFGS 330 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~-~~gi~~~~G~ 330 (386)
.+.+.++.+.+.+.+++.. +. ++ . ...+.++++.++. ......+.+.+. ..|+.+.+|.
T Consensus 288 ~~~~~~~~~~l~~~L~~~~---------~~------~~--~-~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~pg~ 349 (387)
T PRK07777 288 RDSLQAKRDRLAAGLAEAG---------FE------VH--D-SAGTYFLCADPRPLGYDDGTEFCRALPERVGVAAIPMS 349 (387)
T ss_pred HHHHHHHHHHHHHHHHhCC---------CC------cc--C-CCcceEEEecccccCCCCHHHHHHHHHHhCCEEEeCch
Confidence 3444455555555555421 11 11 1 1123445555431 113456666663 5688777776
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHH
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKAL 381 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l 381 (386)
.+... + ...+++|||+++. +++++.++.|++.+
T Consensus 350 ~f~~~--~----------------~~~~~~~Ri~~~~~~~~l~~~l~~l~~~~ 384 (387)
T PRK07777 350 VFYDP--A----------------DAWNHLVRFAFCKRDDTLDEAIRRLRALR 384 (387)
T ss_pred HhCCC--C----------------cCCCCeEEEEecCCHHHHHHHHHHHHHHh
Confidence 42100 0 0125689999985 55555566665544
No 117
>PRK06358 threonine-phosphate decarboxylase; Provisional
Probab=99.95 E-value=5.6e-26 Score=210.71 Aligned_cols=274 Identities=16% Similarity=0.195 Sum_probs=186.0
Q ss_pred HHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------
Q 016612 57 RDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------- 127 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------- 127 (386)
..++++.++++++.+ +.|++++|+ +++..+...+.+ +.|++++|.|+.+. ..++..|.+++.++.+
T Consensus 56 ~~~lr~~ia~~~~~~~~~i~it~Ga~~~l~~~~~~~~~-~~v~i~~P~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~ 130 (354)
T PRK06358 56 YLELRKRIASFEQLDLENVILGNGATELIFNIVKVTKP-KKVLILAPTFAEYE----RALKAFDAEIEYAELTEETNFAA 130 (354)
T ss_pred HHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCC-CcEEEecCChHHHH----HHHHHcCCeeEEEeCccccCCCc
Confidence 456777777777766 556666665 888866665655 68999999998885 4456788888888753
Q ss_pred CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc--------CCCCCCccEEEe
Q 016612 128 DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVMH 196 (386)
Q Consensus 128 d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--------~~~~~~~di~~~ 196 (386)
| +++.+.+.++++++++++|+||||.+.+ +++|.++|+++++++|+||+|...... .....+..+++.
T Consensus 131 d-~~~~~~~~~~~~~v~~~~P~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~Y~~~~~~~~~~~~~~~~~~~~~vi~~~ 209 (354)
T PRK06358 131 N-EIVLEEIKEEIDLVFLCNPNNPTGQLISKEEMKKILDKCEKRNIYLIIDEAFMDFLEENETISMINYLENFKNLIIIR 209 (354)
T ss_pred c-HHHHHhhccCCCEEEEeCCCCCCCCccCHHHHHHHHHHHHhcCCEEEEeCcccccCCCccchhHHHhccCCCCEEEEE
Confidence 3 4555556668999999999999999986 788899999999999999998632211 111224679999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCC
Q 016612 197 SATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 197 S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
|+||.+ |.+|+|+||++++++.+.+.+..... ....+...+.+....++.- ....+.+.++.+.+.+.|++.
T Consensus 210 S~SK~~-gl~G~RiG~lv~~~~~~~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~-- 284 (354)
T PRK06358 210 AFTKFF-AIPGLRLGYGLTSNKNLAEKLLQMRE--PWSINTFADLAGQTLLDDKEYIKKTIQWIKEEKDFLYNGLSEF-- 284 (354)
T ss_pred echhhc-cCcchhheeeecCCHHHHHHHHHhCC--CCcchHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcC--
Confidence 999999 55689999999876666555554432 2345555666655555421 222233334444444444432
Q ss_pred cceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
++..++ ...++++++++++. ..+.+.+...|+.+.+|..+.
T Consensus 285 ------------~~~~~~----~~~g~f~~~~~~~~---~~~~~~l~~~gI~v~~~~~f~-------------------- 325 (354)
T PRK06358 285 ------------KGIKVY----KPSVNFIFFKLEKP---IDLRKELLKKGILIRSCSNYR-------------------- 325 (354)
T ss_pred ------------CCcEEc----CCcceEEEEEcCch---HHHHHHHHHCCeEEEECCCCC--------------------
Confidence 222222 22467888888643 456666667788888776531
Q ss_pred cCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 016612 354 RGLTEDLVRISVGI-EDVNDLISDLDKAL 381 (386)
Q Consensus 354 ~~~~~~~iRis~~~-~~~~~~i~~l~~~l 381 (386)
+.++++|||+++. ++++++++.|++.+
T Consensus 326 -~~~~~~iRls~~~~~~~~~l~~~l~~~~ 353 (354)
T PRK06358 326 -GLDENYYRVAVKSREDNKKLLKALEVIL 353 (354)
T ss_pred -CCCCCEEEEEeCCHHHHHHHHHHHHHHh
Confidence 1235789999975 99999999998765
No 118
>PLN03026 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.9e-26 Score=215.68 Aligned_cols=274 Identities=16% Similarity=0.180 Sum_probs=185.6
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
...++++.+++++|.+ +.|++++|+ +++..+ ..++++||+|++++|.|+.+. ..++..|++++.++.+
T Consensus 87 ~~~~lr~~ia~~~~~~~~~I~~t~Ga~~~i~~~~~~~~~~gd~Vlv~~P~y~~y~----~~~~~~g~~~~~v~~~~~~~~ 162 (380)
T PLN03026 87 ESRRLRAALAEDSGLESENILVGCGADELIDLLMRCVLDPGDKIIDCPPTFGMYV----FDAAVNGAEVIKVPRTPDFSL 162 (380)
T ss_pred CHHHHHHHHHHHhCcChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCEEEEeecCCCCCc
Confidence 3567888888888876 556666665 888754 457899999999999997664 4456789998888753
Q ss_pred CHHHHHhhh-CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----C-CCCCCccEEEeccccc
Q 016612 128 DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----R-PLELGADIVMHSATKF 201 (386)
Q Consensus 128 d~~~l~~~~-~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----~-~~~~~~di~~~S~sK~ 201 (386)
|++++++.+ ++++++|++++|+||||.+.+.+++.++++.. +++|+||+|...... . ....+..+++.||||.
T Consensus 163 d~~~l~~~~~~~~~~~v~l~~P~NPTG~~~~~~~l~~l~~~~-~~vi~DeaY~~~~~~~~~~~~~~~~~~viv~~SfSK~ 241 (380)
T PLN03026 163 DVPRIVEAVETHKPKLLFLTSPNNPDGSIISDDDLLKILELP-ILVVLDEAYIEFSTQESRMKWVKKYDNLIVLRTFSKR 241 (380)
T ss_pred CHHHHHHHHhccCCcEEEEeCCCCCCCCCCCHHHHHHHHhcC-CEEEEECcchhhcCCcchHHHHHhCCCEEEEecchHh
Confidence 788999888 68899999999999999999999999999865 999999998532111 1 1123567999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEe
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVN 278 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 278 (386)
+ |.+|+|+||+++++ ++.+.+...... ...+...+.++...++.. ....+.+.++.+.+.+.|++.+
T Consensus 242 ~-glaGlRiGy~~~~~-~~i~~l~~~~~~--~~~~~~~q~aa~~aL~~~~~~~~~~~~~~~~r~~l~~~L~~~~------ 311 (380)
T PLN03026 242 A-GLAGLRVGYGAFPL-SIIEYLWRAKQP--YNVSVAAEVAACAALSNPKYLEDVKNALVEERERLFGLLKEVP------ 311 (380)
T ss_pred h-cCccccceeeecCH-HHHHHHHHhcCC--CCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHHHCC------
Confidence 9 67789999999874 455555444332 345555555555555432 1222223333334444444321
Q ss_pred cCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCC
Q 016612 279 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 358 (386)
Q Consensus 279 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 358 (386)
+..+. +..++++++.++......++.+.+...|+.++++... + .+
T Consensus 312 --------~~~~~----p~~~~f~~~~~~~~~~~~~~~~~l~~~gI~v~~~~~~----------------------~-~~ 356 (380)
T PLN03026 312 --------FLEPY----PSDANFILCRVTSGRDAKKLKEDLAKMGVMVRHYNSK----------------------E-LK 356 (380)
T ss_pred --------CCeEC----CCCCeEEEEECCCCCCHHHHHHHHHHCCeEEEECCCC----------------------C-CC
Confidence 11111 2346788888753223556777776778877654320 1 25
Q ss_pred CeEEEEecc-CChHHHHHHHHH
Q 016612 359 DLVRISVGI-EDVNDLISDLDK 379 (386)
Q Consensus 359 ~~iRis~~~-~~~~~~i~~l~~ 379 (386)
+++|||++. ++++.+++.|++
T Consensus 357 ~~lRis~~~~~~~~~l~~al~~ 378 (380)
T PLN03026 357 GYIRVSVGKPEHTDALMEALKQ 378 (380)
T ss_pred CEEEEecCCHHHHHHHHHHHHH
Confidence 689999985 456777777654
No 119
>PLN02855 Bifunctional selenocysteine lyase/cysteine desulfurase
Probab=99.95 E-value=5.5e-26 Score=216.11 Aligned_cols=297 Identities=21% Similarity=0.263 Sum_probs=192.7
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeC-cHHHHHHHHHH-----hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKAD--RALCFT-SGMAALAAVTH-----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~-~gt~al~~~~~-----~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
..+++++.+++++|.+ +.|+++ ++|++++.+.. .+++||+|+++++.|++....+..+++..|++++.++.+
T Consensus 77 ~~~~~r~~la~~~~~~~~~~v~~t~g~t~al~~i~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~a~~~g~~v~~v~~~ 156 (424)
T PLN02855 77 AYELARKKVAAFINASTSREIVFTRNATEAINLVAYTWGLANLKPGDEVILSVAEHHSNIVPWQLVAQKTGAVLKFVGLT 156 (424)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEeCCHHHHHHHHHHHhhhhcCCCcCEEEECCCccHHHHHHHHHHHHHcCCEEEEEecC
Confidence 4678899999999973 455555 45688875543 368999999999999988777777788889999888753
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.+++++++|++++++||||.+.|+++|.++|+++|+++++|++|+.+... +....++|++++|+||+
T Consensus 157 ~~~~~~~~~l~~~i~~~t~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 236 (424)
T PLN02855 157 PDEVLDVEQLKELLSEKTKLVATHHVSNVLGSILPVEDIVHWAHAVGAKVLVDACQSVPHMPVDVQTLGADFLVASSHKM 236 (424)
T ss_pred CCCCcCHHHHHHHhccCceEEEEeCccccccccCCHHHHHHHHHHcCCEEEEEhhhhcCCcCCCchhcCCCEEEeecccc
Confidence 789999999999999999999999999999999999999999999999999877653 33446789999999996
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhh--------------------cCCCCChhhHHHH-HhcCCcHHH-HHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAPFDCWIC-LRGVKTMAL-RVEKQQD 259 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~ 259 (386)
+ ||.| +|+++++++ +.+.+..+... ...+.......+. ..+++.+.. -.++..+
T Consensus 237 ~-gp~G--~G~l~~~~~-~~~~~~p~~~g~~~~~~~~~~~~~~~~~~~r~e~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 312 (424)
T PLN02855 237 C-GPTG--IGFLWGKSD-LLESMPPFLGGGEMISDVFLDHSTYAPPPSRFEAGTPAIGEAIGLGAAIDYLSEIGMDRIHE 312 (424)
T ss_pred c-CCCc--cEEEEEchh-hhhcCCCEecCCCceeeeecCccccCCChhhccCCChHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 5 7777 799998754 43333222100 0111122222221 222221111 1222233
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhc---cCCCCceEEEEeCCHHhHHHHHhhcCcc-eeccCCCCccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ---AKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLI 335 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~---~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~~~~G~~~~~~ 335 (386)
+...+.+++.+ .|..+++..++.+. ...++++++|.+++.. ...+.+.|... +|.++.|.++..
T Consensus 313 ~~~~l~~~l~~----------~L~~~~g~~i~~~~~~~~~~r~~~v~~~~~~~~-~~~v~~~L~~~~gI~v~~g~~c~~- 380 (424)
T PLN02855 313 YEVELGTYLYE----------KLSSVPGVRIYGPKPSEGVGRAALCAFNVEGIH-PTDLSTFLDQQHGVAIRSGHHCAQ- 380 (424)
T ss_pred HHHHHHHHHHH----------HHhcCCCEEEeCCCcccccCcccEEEEEECCcC-HHHHHHHhcccCCEEEechhhhhH-
Confidence 33333333322 12222333333221 1234688999886533 55788888766 898887765321
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
+. ....|. ++++|+|++. ++++.+++.|+++++
T Consensus 381 --~~-----------~~~~g~-~~~iRiS~~~ynt~~di~~l~~~l~~~~~ 417 (424)
T PLN02855 381 --PL-----------HRYLGV-NASARASLYFYNTKEEVDAFIHALKDTIA 417 (424)
T ss_pred --HH-----------HHHhCC-CCeEEEEeccCCCHHHHHHHHHHHHHHHH
Confidence 10 011232 3679999976 455555555554443
No 120
>PRK07568 aspartate aminotransferase; Provisional
Probab=99.95 E-value=1.3e-25 Score=212.21 Aligned_cols=297 Identities=21% Similarity=0.230 Sum_probs=188.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhh---cCCCceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKL---DKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~---~g~~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
...|.+. |.+ +++++.+++... ...++.++++++++++.. +..++++||+|++++|.|+.+. .+++..|.
T Consensus 59 ~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g~ 134 (397)
T PRK07568 59 VLAYSHSQGIPELREAFAKYYKKWGIDVEPDEILITNGGSEAILFAMMAICDPGDEILVPEPFYANYN----GFATSAGV 134 (397)
T ss_pred CcCcCCCCCCHHHHHHHHHHHHHhCCCCCcceEEEcCChHHHHHHHHHHhcCCCCEEEEecCCCccHH----HHHHHcCC
Confidence 3457766 766 677777777632 122345555556699874 4557899999999999998775 34567788
Q ss_pred EEEEeCCC--------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc-----
Q 016612 120 VVKRVNTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL----- 183 (386)
Q Consensus 120 ~~~~v~~~--------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~----- 183 (386)
+++.++.+ +++++++++++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|..-.+
T Consensus 135 ~~~~v~~~~~~g~~~~~~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~~~~i~~~~~~~~~~ii~De~y~~~~~~~~~~ 214 (397)
T PRK07568 135 KIVPVTTKIEEGFHLPSKEEIEKLITPKTKAILISNPGNPTGVVYTKEELEMLAEIAKKHDLFLISDEVYREFVYDGLKY 214 (397)
T ss_pred EEEEeecCcccCCCCCCHHHHHHhcCccceEEEEECCCCCCCccCCHHHHHHHHHHHHHCCcEEEEeccchhcccCCCCc
Confidence 88888752 458898888889999999999999999985 78899999999999999999863221
Q ss_pred cCCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHH
Q 016612 184 SRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVE 255 (386)
Q Consensus 184 ~~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 255 (386)
..... .+..+++.|+||.+ +.+|+|+||++++++++.+.+...... ....+...+.++...+.. +.....
T Consensus 215 ~s~~~~~~~~~~~i~~~S~SK~~-~~~G~R~G~~~~~~~~~~~~~~~~~~~-~~~~s~~~q~~~~~~l~~~~~~~~~~~~ 292 (397)
T PRK07568 215 TSALSLEGLEDRVIIIDSVSKRY-SACGARIGCLISKNKELIAAAMKLCQA-RLSPPTLEQIGAAALLDTPESYFDEVRE 292 (397)
T ss_pred cChhhcCCCcCCEEEEecchhhc-cCCCcceEEEecCCHHHHHHHHHHhhc-cCCCCcHHHHHHHHHhhCCHHHHHHHHH
Confidence 11111 24569999999999 456799999998766665544333222 233444455444444432 122223
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC------cceeccCCC
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK------YFSITVSFG 329 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~------~~gi~~~~G 329 (386)
.+.++...+.+.|++.+ +..+. .+. .+.++++.++.. ....+.+.+. ..|+.+.+|
T Consensus 293 ~~~~~~~~l~~~L~~~~--------------~~~~~--~p~-g~~~~~~~l~~~-~~~~~~~~l~~~~~~~~~gv~v~pg 354 (397)
T PRK07568 293 EYKKRRDILYEELNKIP--------------GVVCE--KPK-GAFYIIAKLPVD-DAEDFAKWLLTDFNYNGETVMVAPA 354 (397)
T ss_pred HHHHHHHHHHHHHhcCC--------------Cceec--CCC-cceEEEEecCCC-CHHHHHHHHHhhcccccceEEEeCc
Confidence 33444444445554321 11111 111 234456677432 2333444332 257777776
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHhcC
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~~~ 384 (386)
..+.. .+ +.+++++|||++ .+++++.++.|.+++++.
T Consensus 355 ~~f~~--~~----------------~~~~~~iRls~~~~~~~~~~~~~~l~~~l~~~ 393 (397)
T PRK07568 355 SGFYA--TP----------------GLGKNEIRIAYVLNEEDLKRAMEILKEALEKY 393 (397)
T ss_pred hHhcC--CC----------------CCCCCeEEEEEeCCHHHHHHHHHHHHHHHHHh
Confidence 54210 01 123578999986 477788888888888754
No 121
>PRK14807 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=7.5e-26 Score=209.81 Aligned_cols=274 Identities=18% Similarity=0.231 Sum_probs=182.8
Q ss_pred HHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----C
Q 016612 57 RDALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----D 128 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d 128 (386)
..++++.++++++.+ +.|++++|+ +++..+ .+++++||+|++++|+|+.+. ..++..|.+++.++.+ |
T Consensus 61 ~~~lr~~ia~~~~~~~~~i~it~G~~~~l~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~d 136 (351)
T PRK14807 61 AEKLREELARYCSVVPTNIFVGNGSDEIIHLIMLAFINKGDVVIYPHPSFAMYS----VYSKIAGAVEIPVKLKEDYTYD 136 (351)
T ss_pred HHHHHHHHHHHhCCCcccEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEeecCCCCCCC
Confidence 467788888888875 566666665 788754 557899999999999998664 4556788888888753 6
Q ss_pred HHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC---ccC-CCCCCccEEEeccccccc
Q 016612 129 LDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV---LSR-PLELGADIVMHSATKFIA 203 (386)
Q Consensus 129 ~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~---~~~-~~~~~~di~~~S~sK~~~ 203 (386)
++++++.+++ +++++++++|+||||.+.+.+++.++|++++.++|+||+|.... ... ....+..+++.|+||.+
T Consensus 137 ~~~l~~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~ivDe~y~~~~~~~~~~~~~~~~~vi~~~S~SK~~- 215 (351)
T PRK14807 137 VGSFIKVIEKYQPKLVFLCNPNNPTGSVIEREDIIKIIEKSRGIVVVDEAYFEFYGNTIVDVINEFENLIVLRTLSKAF- 215 (351)
T ss_pred HHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEeCcchhhcccchHHHhhhCCCEEEEecchHhc-
Confidence 8899998874 89999999999999999999999999999888999999985321 101 11235679999999999
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHhhCCCcceEecCC
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 281 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 281 (386)
|.+|+|+||++++ +++.+.+...... ...+...+.++...++. +....+...++.+.+.+.+++
T Consensus 216 ~~~GlRiG~~v~~-~~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~r~~l~~~l~~----------- 281 (351)
T PRK14807 216 GLAGLRVGYAVAN-ENILKYLNLVKSP--YNINSLSQVIALKVLRTGVLKERVNYILNERERLIKELSK----------- 281 (351)
T ss_pred ccchhceeeeecC-HHHHHHHHHccCC--CCcCHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHh-----------
Confidence 6678999999986 5566655544332 33455555555444432 111222222333333333332
Q ss_pred CCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeE
Q 016612 282 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 361 (386)
Q Consensus 282 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 361 (386)
++++.+. +..++++++.+++ .+.+.+.+...|+.+..+... + + .++++
T Consensus 282 ---~~g~~~~----~~~~~~~~i~~~~---~~~~~~~l~~~gV~v~~~~~~-----~----------------~-~~~~i 329 (351)
T PRK14807 282 ---IPGIKVY----PSKTNFILVKFKD---ADYVYQGLLERGILVRDFSKV-----E----------------G-LEGAL 329 (351)
T ss_pred ---CCCcEEC----cCCccEEEEEcCC---HHHHHHHHHHCCEEEEECCCC-----C----------------C-CCCeE
Confidence 2222221 2246777887764 345555555566665432210 0 1 25679
Q ss_pred EEEecc-CChHHHHHHHHHHH
Q 016612 362 RISVGI-EDVNDLISDLDKAL 381 (386)
Q Consensus 362 Ris~~~-~~~~~~i~~l~~~l 381 (386)
||+++. ++.+.+++.|++.+
T Consensus 330 Ris~~~~~~~~~l~~~l~~~~ 350 (351)
T PRK14807 330 RITVSSCEANDYLINGLKELL 350 (351)
T ss_pred EEEcCCHHHHHHHHHHHHHhh
Confidence 999985 66778888877654
No 122
>cd06454 KBL_like KBL_like; this family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to serine palmitoyltransferase (SPT), 5-aminolevulinate synthase (ALAS), 8-amino-7-oxononanoate synthase (AONS), and 2-amino-3-ketobutyrate CoA ligase (KBL). SPT is responsible for the condensation of L-serine with palmitoyl-CoA to produce 3-ketodihydrospingosine, the reaction of the first step in sphingolipid biosynthesis. ALAS is involved in heme biosynthesis; it catalyzes the synthesis of 5-aminolevulinic acid from glycine and succinyl-coenzyme A. AONS catalyses the decarboxylative condensation of l-alanine and pimeloyl-CoA in the first committed step of biotin biosynthesis. KBL catalyzes the second reaction step of the metabolic degradation pathway for threonine converting 2-amino-3-ketobutyrate, to glycine and acetyl-CoA. The members of this CD are widely found in all three forms of life.
Probab=99.95 E-value=7.2e-26 Score=210.36 Aligned_cols=324 Identities=20% Similarity=0.192 Sum_probs=208.0
Q ss_pred eeeccCCCCCCCCCcccceee-eeeeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHH
Q 016612 12 LLMNFSNEFDPYGALSTPLYQ-TATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~ 87 (386)
..++++ +|+|+|...+|... +......+. .+....|... | .+.++++++.+++++|.++.+++++|++++. ++.
T Consensus 2 ~~~~~~-~~~~~~~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~iv~~sg~~a~~~~~~ 79 (349)
T cd06454 2 KVLNFC-SNDYLGLANHPEVIEAAKEALDKY-GVGAGGSRLISGTSDLHEELEEELAEFHGKEAALVFSSGYAANDGVLS 79 (349)
T ss_pred Cceecc-cCCccccCCCHHHHHHHHHHHHHh-CCCCCCcCeecCCchHHHHHHHHHHHHhCCCCEEEeccHHHHHHHHHH
Confidence 357888 99999999555433 211111110 0111122222 4 3588999999999999988899999998865 556
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-----CCceEEEEeCCCCCCcccccHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-----PWTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-----~~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
+++++||.|++++|.|+++.. .++..|.+++.++..|.+++++.++ ++++++++++++||+|...|+++|.
T Consensus 80 ~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~le~~i~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~ 155 (349)
T cd06454 80 TLAGKGDLIISDSLNHASIID----GIRLSGAKKRIFKHNDMEDLEKLLREARRPYGKKLIVTEGVYSMDGDIAPLPELV 155 (349)
T ss_pred HhcCCCCEEEEehhhhHHHHH----HHHHcCCceEEecCCCHHHHHHHHHHhhccCCCeEEEEeccccCCCCccCHHHHH
Confidence 678999999999999988753 3456788888888778888888876 3578888899999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCCCCcc---------CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh--hc
Q 016612 163 EMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AE 231 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~~~~~~---------~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~--~~ 231 (386)
++|+++|+++|+|++++.+... .....+.|++++|+||++++ . +|+++.+ +.+.+.+..... ..
T Consensus 156 ~~~~~~~~~livD~a~~~g~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~---gG~i~~~-~~~~~~~~~~~~~~~~ 230 (349)
T cd06454 156 DLAKKYGAILFVDEAHSVGVYGPHGRGVEEFGGLTDDVDIIMGTLGKAFGA-V---GGYIAGS-KELIDYLRSYARGFIF 230 (349)
T ss_pred HHHHHcCCEEEEEccccccccCCCCCChhhhccccccCcEEEeechhhhcc-c---CCEEECC-HHHHHHHHHhchhhhc
Confidence 9999999999999998755432 11234789999999999954 3 4888776 445444433222 11
Q ss_pred CCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC
Q 016612 232 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 308 (386)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (386)
+...++....++...++.+ ..+.++..++.+.+.+.+.+.. +. ++. ...+.++++.+.+
T Consensus 231 ~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g---------~~------~~~---~~~~~~~~~~~~~ 292 (349)
T cd06454 231 STSLPPAVAAAALAALEVLQGGPERRERLQENVRYLRRGLKELG---------FP------VGG---SPSHIIPPLIGDD 292 (349)
T ss_pred cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC---------Cc------ccC---CCCCcEEEEeCCC
Confidence 2234444443433333222 2334455555555555555431 11 110 1122334444443
Q ss_pred HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 309 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 309 ~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
....+++.+.+...|+.+..+.... . ....+++|++++....++.++.+.++|++.
T Consensus 293 ~~~~~~~~~~L~~~gI~~~~~~~~~---~-----------------~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 348 (349)
T cd06454 293 PAKAVAFSDALLERGIYVQAIRYPT---V-----------------PRGTARLRISLSAAHTKEDIDRLLEALKEV 348 (349)
T ss_pred hHHHHHHHHHHHhCCceEEEecCCc---c-----------------CCCCCeEEEEEeCCCCHHHHHHHHHHHHHh
Confidence 3446778777777787765432100 0 012467999998766666666666666554
No 123
>TIGR03542 DAPAT_plant LL-diaminopimelate aminotransferase. This clade of the pfam00155 superfamily of aminotransferases includes several which are adjacent to elements of the lysine biosynthesis via diaminopimelate pathway (GenProp0125). This clade includes characterized species in plants and Chlamydia. Every member of this clade is from a genome which possesses most of the lysine biosynthesis pathway but lacks any of the known succinylases, desuccinylases, acetylases or deacetylases typical of the acylated versions of this pathway nor do they have the direct, NADPH-dependent enzyme (ddh).
Probab=99.95 E-value=6.9e-26 Score=213.82 Aligned_cols=289 Identities=16% Similarity=0.180 Sum_probs=175.7
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCCC-ceEEeCcH-HHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc---
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKAD-RALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--- 119 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~~-~~i~~~~g-t~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--- 119 (386)
..|.+. |.+ +++++.+++.+. +.+ +.|++++| ++++..+..++.+||.|++++|+|+.+. .+++..|.
T Consensus 69 ~~Y~p~~g~~~lr~aia~~~~~~-~~~~d~I~it~Ga~~al~~l~~l~~~gd~Vlv~~P~y~~~~----~~~~~~g~~~~ 143 (402)
T TIGR03542 69 RGYGPEQGYPFLREAIAENDYRG-RIDPEEIFISDGAKCDVFRLQSLFGSDNTVAVQDPVYPAYV----DSNVMAGRAGV 143 (402)
T ss_pred cCCCCCCCCHHHHHHHHHHHHhc-CCCHHHEEECCCcHHHHHHHHHhcCCCCEEEEeCCCCcchH----HHHHHcCCccc
Confidence 457665 776 677777765322 233 45555555 4888877777899999999999999886 44456677
Q ss_pred --------EEEEeCCCCHHHHHhhh--CCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc--
Q 016612 120 --------VVKRVNTCDLDEVASAI--GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-- 184 (386)
Q Consensus 120 --------~~~~v~~~d~~~l~~~~--~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-- 184 (386)
+++.++.+..+.+...+ .+++++|++++|+||||.+++ +++|.++|+++|++||+||+|..-...
T Consensus 144 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~i~l~nP~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~y~~~~~~~~ 223 (402)
T TIGR03542 144 LDDDGRYSKITYLPCTKENNFIPDLPEEPKIDIIYLCSPNNPTGTVLTKEQLKELVDYANEHGSLILFDAAYSAFISDPS 223 (402)
T ss_pred cccccccceEEEeecchhhCCCCCccccCCceEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCeEEEEEchhhhhccCCC
Confidence 88887764221121111 157899999999999999987 788999999999999999998632211
Q ss_pred --CC-C--C--CCccEEEeccccccccCCCceEEEEEEcChhHH-------HHHHHhhhhcCCCCChhhHHHHHhcCCc-
Q 016612 185 --RP-L--E--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-------KELYFLQNAEGSGLAPFDCWICLRGVKT- 249 (386)
Q Consensus 185 --~~-~--~--~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 249 (386)
.+ . . .+..+++.|+||.+ |.+|+|+||++++++.+. +...........+.+...+.++...+..
T Consensus 224 ~~~~~~~~~~~~~~vi~~~SfSK~~-g~pGlRiG~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~ 302 (402)
T TIGR03542 224 LPHSIFEIPGAKECAIEFRSFSKTA-GFTGVRLGWTVVPKELTYADGHSVIQDWERRQCTKFNGASYPVQRAAEAAYAGE 302 (402)
T ss_pred CCcchhhCCCCcccEEEEecCcccc-CCCCcceEEEEecHHHhhcchhhHHHHHHHHhhhcccCCCHHHHHHHHHHHcCc
Confidence 11 1 1 13468899999999 556899999999755331 1111111112223444444443333321
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-ccee
Q 016612 250 ----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSI 324 (386)
Q Consensus 250 ----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi 324 (386)
+......+.++.+.+.+.|++.. +. +. ....+.++++.++......++.+.+. ..++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~~L~~~~---------~~------~~---~~~~~~f~~v~l~~~~~~~~l~~~l~~~~gv 364 (402)
T TIGR03542 303 GLQPILEAISYYMENARILRKALEAAG---------FK------VY---GGEHAPYLWVKTPEGISSWDFFDFLLYQYHV 364 (402)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcC---------ce------ec---CCCceeEEEEECCCCCCHHHHHHHHHHhCCE
Confidence 22223334455555556655431 11 11 01135678888864323445555543 4577
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHH
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKA 380 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~ 380 (386)
.+.+|..+. ..+++++||+++. +++++.++.|+++
T Consensus 365 ~v~pg~~f~---------------------~~~~~~iRis~~~~~~~l~~~l~~l~~~ 401 (402)
T TIGR03542 365 VGTPGSGFG---------------------PSGEGFVRFSAFGKRENIVEACERIKEA 401 (402)
T ss_pred EEeCchhhC---------------------CCCCCEEEEEecCCHHHHHHHHHHHHhh
Confidence 777766421 0125789999753 4455555555543
No 124
>PRK06836 aspartate aminotransferase; Provisional
Probab=99.95 E-value=2.2e-25 Score=209.87 Aligned_cols=290 Identities=19% Similarity=0.201 Sum_probs=192.5
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.+ +++.+.+++...++. ++.++++++++++.. +..++++||.|++++|.|..+. .+++..|
T Consensus 66 ~~~y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vli~~p~~~~~~----~~~~~~g 141 (394)
T PRK06836 66 LHGYMPNAGYPEVREAIAESLNRRFGTPLTADHIVMTCGAAGALNVALKAILNPGDEVIVFAPYFVEYR----FYVDNHG 141 (394)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCcCcEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcC
Confidence 4567665 776 788888888765433 345555555699875 5557899999999999999875 4556789
Q ss_pred cEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHH------cCCEEEEeCCCCCCCc
Q 016612 119 VVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHA------HGALLLVDNSIMSPVL 183 (386)
Q Consensus 119 ~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~------~~~~li~D~a~~~~~~ 183 (386)
++++.++.+ |+++++++++++++++++++|+||||.+.+ +++|+++|++ ||+++|+|++|..-.+
T Consensus 142 ~~v~~v~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~NPtG~~~~~~~~~~l~~la~~~~~~~~~~~~ii~De~y~~~~~ 221 (394)
T PRK06836 142 GKLVVVPTDTDTFQPDLDALEAAITPKTKAVIINSPNNPTGVVYSEETLKALAALLEEKSKEYGRPIYLISDEPYREIVY 221 (394)
T ss_pred CEEEEEecCCccCcCCHHHHHhhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHhhhccCCCeEEEEecccccccc
Confidence 999888763 689999999889999999999999999987 6778888998 8999999999863222
Q ss_pred c-----C-CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHH------HHHhhhhcC-CCCChhhHHHHHhcCCcH
Q 016612 184 S-----R-PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE------LYFLQNAEG-SGLAPFDCWICLRGVKTM 250 (386)
Q Consensus 184 ~-----~-~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 250 (386)
. . ....+.+++++|+||.+ |.+|+|+||++++++ +.+. +.......+ ...+...+.++...+...
T Consensus 222 ~~~~~~~~~~~~~~~i~~~S~SK~~-~~pGlRiG~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~ 299 (394)
T PRK06836 222 DGAEVPYIFKYYDNSIVVYSFSKSL-SLPGERIGYIAVNPE-MEDADDLVAALVFANRILGFVNAPALMQRVVAKCLDAT 299 (394)
T ss_pred CCCCCCChHHccCcEEEEecchhhc-cCcceeeEEEecCHH-HhhhHHHHHHHHHHhhccccccCCHHHHHHHHHHhCCh
Confidence 1 1 11235689999999999 555799999998744 3221 111112112 234444555554444432
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCC
Q 016612 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 330 (386)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~ 330 (386)
.....+.++.+.+.+.|++.. +. +. . +..+.++++.++.. ....+.+.+...|+.+.+|.
T Consensus 300 -~~~~~~~~~r~~l~~~L~~~g---------~~------~~--~-~~gg~~~~~~~~~~-~~~~~~~~l~~~gv~v~~g~ 359 (394)
T PRK06836 300 -VDVSIYKRNRDLLYDGLTELG---------FE------CV--K-PQGAFYLFPKSPEE-DDVAFCEKAKKHNLLLVPGS 359 (394)
T ss_pred -HHHHHHHHHHHHHHHHHHhCC---------CE------ee--c-CCceEEEEEeCCCC-CHHHHHHHHHhCCEEEECch
Confidence 223445555555666665431 11 10 1 11244555556543 35566677777888887776
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
.+. ..+++||+++. +.+++.++.|+++++++
T Consensus 360 ~f~-----------------------~~~~iRi~~~~~~~~~~~~i~~l~~~l~~~ 392 (394)
T PRK06836 360 GFG-----------------------CPGYFRLSYCVDTETIERSLPAFEKLAKEY 392 (394)
T ss_pred hcC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 421 14679999973 55566677778777653
No 125
>PRK04870 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=1.1e-26 Score=216.15 Aligned_cols=282 Identities=18% Similarity=0.211 Sum_probs=188.9
Q ss_pred CccccCCCCchHHHHHHHHHhhcCCC--ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEE
Q 016612 46 PYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (386)
Q Consensus 46 ~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 121 (386)
...|.+.| ..++++.+++++|.+ +.|++++|+ +++..+ ..++++||+|++++|+|..+. ..++..|+++
T Consensus 57 ~~~Y~~~~---~~~lr~~ia~~~~~~~~~~I~~t~G~~~~i~~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~ 129 (356)
T PRK04870 57 LNRYPDPR---AAALKAALRAAMGVPAGADVLLGNGSDELIQLLALACAKPGATVLAPEPGFVMYR----MSAKLAGLEF 129 (356)
T ss_pred cccCCCCC---HHHHHHHHHHHhCcCCCCcEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCHHHHH----HHHHHcCCEE
Confidence 34565433 356777777777764 367777776 778755 456799999999999998774 5677889999
Q ss_pred EEeCCC-----CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----CCCCCCc
Q 016612 122 KRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGA 191 (386)
Q Consensus 122 ~~v~~~-----d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----~~~~~~~ 191 (386)
+.++.+ |++++++.+. .+++++++++|+||||.+.+.+++.++++..++++|+||+|..-... .....+.
T Consensus 130 ~~i~~~~~~~~d~~~l~~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~i~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~ 209 (356)
T PRK04870 130 VGVPLTADFTLDLPAMLAAIAEHRPALVFLAYPNNPTGNLFDDADVERIIEAAPGLVVVDEAYQPFAGDSWLPRLARFPN 209 (356)
T ss_pred EEecCCCCCCCCHHHHHHHhhcCCCCEEEEcCCCCCCCCCCCHHHHHHHHHHCCCEEEEECCchhhcCcchHHHHhhCCC
Confidence 998764 7899999886 58999999999999999999888888887768899999998532111 1112346
Q ss_pred cEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHH
Q 016612 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 192 di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l 268 (386)
.+++.|+|| + +.+|+|+||++++ +++.+.+..... ....+...+.++...++. +....+...++.+.+.+.+
T Consensus 210 vi~~~S~SK-~-~~~GlRiG~~i~~-~~~i~~~~~~~~--~~~~~~~~q~~a~~~l~~~~~~~~~~~~~~~~~~~l~~~L 284 (356)
T PRK04870 210 LLVMRTVSK-L-GLAGLRLGYLAGH-PAWIAELDKVRP--PYNVNVLTQATALFALEHVDVLDAQAAQLRAERTRLAAAL 284 (356)
T ss_pred EEEEecchh-h-hhHHHhhhhhhCC-HHHHHHHHHccC--CCcCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHH
Confidence 799999999 6 6678999999987 445554544332 233444444444444332 2222333344444444444
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCH
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 348 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~ 348 (386)
++.+ ++.+. +..++++++.+++ ...+.+.+...|+.+.+|..+.
T Consensus 285 ~~~~--------------~~~~~----~~~~~~~~~~~~~---~~~~~~~l~~~gI~v~~~~~f~--------------- 328 (356)
T PRK04870 285 AALP--------------GVTVF----PSAANFILVRVPD---AAAVFDGLKTRGVLVKNLSGMH--------------- 328 (356)
T ss_pred HhCC--------------CcEEC----CCCCeEEEEECCC---HHHHHHHHHHCCEEEEECCCCC---------------
Confidence 4322 21111 2246788888863 3566777777888877665421
Q ss_pred HHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHH
Q 016612 349 EVRQARGLTEDLVRISVGI-EDVNDLISDLDKAL 381 (386)
Q Consensus 349 ~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l 381 (386)
+..++++|||++. ++++.+++.|+++|
T Consensus 329 ------~~~~~~iRis~~~~~~~~~l~~al~~~~ 356 (356)
T PRK04870 329 ------PLLANCLRVTVGTPEENAQFLAALKAAL 356 (356)
T ss_pred ------CCCCCeEEEeCCCHHHHHHHHHHHHHhC
Confidence 1125789999984 77777777776643
No 126
>PRK01533 histidinol-phosphate aminotransferase; Validated
Probab=99.95 E-value=4.9e-26 Score=211.53 Aligned_cols=267 Identities=18% Similarity=0.259 Sum_probs=184.4
Q ss_pred HHHHHHHHhhcCCC-ceEEeCcHH-HHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----CHH
Q 016612 58 DALESLLAKLDKAD-RALCFTSGM-AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLD 130 (386)
Q Consensus 58 ~~l~~~l~~~~g~~-~~i~~~~gt-~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~ 130 (386)
.++++.++++++.+ +.|++++|+ +++.. +..++++||+|++++|+|+.+. ..++..|.+++.++.+ |++
T Consensus 67 ~~Lr~aia~~~~~~~~~I~vt~Gs~e~i~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~v~~v~~~~~~~d~~ 142 (366)
T PRK01533 67 TTLRQTIANKLHVKMEQVLCGSGLDEVIQIISRAVLKAGDNIVTAGATFPQYR----HHAIIEGCEVKEVALNNGVYDLD 142 (366)
T ss_pred HHHHHHHHHHhCCCcceEEECCCHHHHHHHHHHHhcCCCCEEEEcCCcHHHHH----HHHHHcCCEEEEeecCCCCcCHH
Confidence 35666666677766 566666665 88874 4557899999999999998886 4456789999988864 799
Q ss_pred HHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHH---HHcCCEEEEeCCCCCCCcc----C----CCCCCccEEEeccc
Q 016612 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA---HAHGALLLVDNSIMSPVLS----R----PLELGADIVMHSAT 199 (386)
Q Consensus 131 ~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la---~~~~~~li~D~a~~~~~~~----~----~~~~~~di~~~S~s 199 (386)
++++.++++++++++++||||||.+.+.+++.+++ ++++ ++|+||+|...... . ....+..+++.|||
T Consensus 143 ~l~~~~~~~~~~v~i~~P~NPTG~~~~~~~l~~l~~~~~~~~-~~iiDe~y~~~~~~~~~~~~~~~~~~~~~vi~~~SfS 221 (366)
T PRK01533 143 EISSVVDNDTKIVWICNPNNPTGTYVNDRKLTQFIEGISENT-LIVIDEAYYEYVTAKDFPETLPLLEKHKNILVLRTFS 221 (366)
T ss_pred HHHHHhCcCCcEEEEeCCCCCCCCCcCHHHHHHHHHhCCCCC-EEEEEccHHHhhccccCcchhHHhccCCCEEEEeCch
Confidence 99998888999999999999999999866555554 4544 67789998521111 1 11235679999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH---HHHHHHHHHHHHHHHHhhCCCcce
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLASHPRVKK 276 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~~ 276 (386)
|.+ |.+|+|+||++++ +++.+.+..... ....+...+.++...++.-.. ..+...++.+.+...++..
T Consensus 222 K~~-~l~GlRiG~~i~~-~~~~~~l~~~~~--~~~~~~~~q~aa~~~l~~~~~~~~~~~~~~~~r~~~~~~l~~~----- 292 (366)
T PRK01533 222 KAY-GLASFRVGYAVGH-EELIEKLNVVRL--PFNVSSLAQKAATIAFGDDEFIEEIVRVNTEGLRQYESFCKEN----- 292 (366)
T ss_pred HHh-cChHHHHhHHhCC-HHHHHHHHHhcC--CCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhC-----
Confidence 999 5568999999986 556665654432 356677777777666654211 1222223333333333322
Q ss_pred EecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 277 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 277 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+++ ++ .+.++++++.+++ ...+.+.+...|+.++. +
T Consensus 293 ----g~~------~~----~~~~nf~~~~~~~---~~~~~~~l~~~GI~Vr~--~------------------------- 328 (366)
T PRK01533 293 ----EIP------FY----QSQTNFIFLPVEN---GGEIYEACAHAGFIIRP--F------------------------- 328 (366)
T ss_pred ----CCc------cC----CCcCcEEEEeCCC---HHHHHHHHHHCCcEEcc--C-------------------------
Confidence 111 11 3357889998853 34677777778887764 1
Q ss_pred CCCeEEEEec-cCChHHHHHHHHHHHhc
Q 016612 357 TEDLVRISVG-IEDVNDLISDLDKALRT 383 (386)
Q Consensus 357 ~~~~iRis~~-~~~~~~~i~~l~~~l~~ 383 (386)
++++|||++ .++++.+++.|++.++.
T Consensus 329 -~~~iRis~~~~~~~~~l~~al~~~~~~ 355 (366)
T PRK01533 329 -PNGVRITVGTREQNEGVISVLQQHFEN 355 (366)
T ss_pred -CCceEEeCCCHHHHHHHHHHHHHHHHh
Confidence 245999997 59999999999988753
No 127
>PRK03158 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=3.4e-26 Score=213.14 Aligned_cols=273 Identities=20% Similarity=0.259 Sum_probs=185.2
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----C
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----D 128 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d 128 (386)
...++++.++++++.+ +.+++++|+ +++..+ .+++++||.|++++|+|+.+. ..+...|.+++.++.. |
T Consensus 65 g~~~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~d 140 (359)
T PRK03158 65 YAPELRTKVAKHLGVDEEQLLFGAGLDEVIQMISRALLNPGTNTVMAEPTFSQYR----HNAIIEGAEVREVPLKDGGHD 140 (359)
T ss_pred cHHHHHHHHHHHhCCCHHHEEECCCHHHHHHHHHHHHhCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEEecCCCCcC
Confidence 3456777777777765 455566565 888754 457899999999999998875 3445678888888764 7
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCCcc----CC----CCCCccEEEecc
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLS----RP----LELGADIVMHSA 198 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~~~----~~----~~~~~di~~~S~ 198 (386)
++++++.++++++++++++|+||||.+.+.++|.++++. +|+++|+||+|...... .. ...+.++++.|+
T Consensus 141 ~~~l~~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~~~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S~ 220 (359)
T PRK03158 141 LEAMLKAIDEQTKIVWICNPNNPTGTYVNHEELLSFLESVPSHVLVVLDEAYYEYVTAEDYPDTLPLLEKYENLIVLRTF 220 (359)
T ss_pred HHHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchHhhcCCcccccHHHHHHhcCCEEEEEec
Confidence 889998888899999999999999999999998888887 59999999998643221 11 123568999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH---HHHHHHHHHHHHHHHHhhCCCcc
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
||.+ |.+|+|+||+++++ ++.+.+...... ...+...+.++...+..-.. ..+...++.+.+.+.+++.
T Consensus 221 SK~~-g~~GlRiG~~v~~~-~~~~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~---- 292 (359)
T PRK03158 221 SKAY-GLAALRVGYGIASE-ELIEKLNIARPP--FNTTRIAQYAAIAALEDQAFLKECVEKNAEGLEQYYAFCKEY---- 292 (359)
T ss_pred hHhh-cCcchhhehhcCCH-HHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC----
Confidence 9999 55689999999874 455555444332 34566666666665543211 1112222233333333322
Q ss_pred eEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 276 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 276 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
++ .++ +..+.++++.++. ...++.+.+...|+.+.+|..+.
T Consensus 293 -----~~------~~~----~~~g~~i~~~~~~--~~~~~~~~l~~~gv~v~~g~~f~---------------------- 333 (359)
T PRK03158 293 -----GL------FYY----PSQTNFIFVDTGR--DANELFEALLKKGYIVRSGAALG---------------------- 333 (359)
T ss_pred -----CC------eeC----CCcCcEEEEECCC--CHHHHHHHHHHCCeEEeeCCCCC----------------------
Confidence 11 111 2235677777642 24566666666788888776421
Q ss_pred CCCCeEEEEec-cCChHHHHHHHHHH
Q 016612 356 LTEDLVRISVG-IEDVNDLISDLDKA 380 (386)
Q Consensus 356 ~~~~~iRis~~-~~~~~~~i~~l~~~ 380 (386)
.++++||+++ .++++++++.|++.
T Consensus 334 -~~~~iRi~~~~~~~~~~l~~al~~~ 358 (359)
T PRK03158 334 -FPTGVRITIGLKEQNDKIIELLKEL 358 (359)
T ss_pred -CCCeEEEecCCHHHHHHHHHHHHHh
Confidence 1467999997 47788888888765
No 128
>TIGR01140 L_thr_O3P_dcar L-threonine-O-3-phosphate decarboxylase. This family contains pyridoxal phosphate-binding class II aminotransferases (see PFAM:PF00222) closely related to, yet distinct from, histidinol-phosphate aminotransferase (HisC). It is found in cobalamin biosynthesis operons in Salmonella typhimurium and Bacillus halodurans (each of which also has HisC) and has been shown to have L-threonine-O-3-phosphate decarboxylase activity in Salmonella. Although the gene symbol cobD was assigned in Salmonella, cobD in other contexts refers to a different cobalamin biosynthesis enzyme, modeled by pfam03186 and called cbiB in Salmonella.
Probab=99.95 E-value=7e-26 Score=208.15 Aligned_cols=262 Identities=19% Similarity=0.194 Sum_probs=180.0
Q ss_pred CCchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHH
Q 016612 53 GNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD 130 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~ 130 (386)
+.+...++++.+++++|.+ +.+++++|+ +++.++..++.+| .|++++|+|..+. ..++..|++++.++ |++
T Consensus 45 ~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~i~~~~~~l~~g-~vl~~~p~y~~~~----~~~~~~g~~~~~~~--d~~ 117 (330)
T TIGR01140 45 PDPEYDELRAAAAAYYGLPAASVLPVNGAQEAIYLLPRLLAPG-RVLVLAPTYSEYA----RAWRAAGHEVVELP--DLD 117 (330)
T ss_pred CCccHHHHHHHHHHHhCCChhhEEECCCHHHHHHHHHHHhCCC-eEEEeCCCcHHHH----HHHHHcCCEEEEeC--CHH
Confidence 3333478888888888875 566677776 7888777778888 6999999998875 45568899999988 899
Q ss_pred HHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-CCC----CCCccEEEecccccc
Q 016612 131 EVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-RPL----ELGADIVMHSATKFI 202 (386)
Q Consensus 131 ~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-~~~----~~~~di~~~S~sK~~ 202 (386)
++++.+ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|...... +.. ..+.++++.|+||++
T Consensus 118 ~l~~~~-~~~~~v~i~~p~NPtG~~~~~~~~~~l~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~i~~~S~SK~~ 196 (330)
T TIGR01140 118 RLPAAL-EELDVLVLCNPNNPTGRLIPPETLLALAARLRARGGWLVVDEAFIDFTPDASLAPQAARFPGLVVLRSLTKFF 196 (330)
T ss_pred HHHhhc-ccCCEEEEeCCCCCCCCCCCHHHHHHHHHHhHhcCCEEEEECcccccCCccchhhHhccCCCEEEEEecchhh
Confidence 999888 46889999999999999998 777888999999999999998633322 111 135679999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEec
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNY 279 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 279 (386)
|.+|+|+||+++++ ++.+.+..... ....+.+.+.++...++.- ....+.+.++.+.+.+.+++.+.
T Consensus 197 -g~~G~R~G~i~~~~-~~~~~l~~~~~--~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~------ 266 (330)
T TIGR01140 197 -GLAGLRLGFVVAHP-ALLARLREALG--PWTVNGPARAAGRAALADTAWQAATRARLAAERARLAALLARLGG------ 266 (330)
T ss_pred -cCchhhhhheeCCH-HHHHHHHhcCC--CCCchHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhCCC------
Confidence 55689999999875 45555554432 2344555555554444421 22234444555555555554421
Q ss_pred CCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCC
Q 016612 280 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 359 (386)
Q Consensus 280 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 359 (386)
+ .+. +..+.++++.+++ ..++.+.+...|+.+.+|..+. +...+
T Consensus 267 --~------~~~----~~~~~f~~~~~~~---~~~l~~~l~~~gi~v~pg~~f~---------------------~~~~~ 310 (330)
T TIGR01140 267 --L------EVV----GGTALFLLVRTPD---AAALHEALARRGILIRDFDNFP---------------------GLDPR 310 (330)
T ss_pred --c------eEC----CCCCeEEEEEcCC---HHHHHHHHHHCCEEEEECCCCC---------------------CCCCC
Confidence 1 110 1235677777654 3456666666788877776531 12356
Q ss_pred eEEEEeccC
Q 016612 360 LVRISVGIE 368 (386)
Q Consensus 360 ~iRis~~~~ 368 (386)
+|||+++..
T Consensus 311 ~iRi~~~~~ 319 (330)
T TIGR01140 311 YLRFALPTD 319 (330)
T ss_pred EEEEEecCH
Confidence 899999853
No 129
>PRK02610 histidinol-phosphate aminotransferase; Provisional
Probab=99.95 E-value=6.7e-26 Score=211.86 Aligned_cols=284 Identities=15% Similarity=0.170 Sum_probs=184.8
Q ss_pred ccccCCCCc-hHHHHHHHHHhhcC----CC-ceEEeCcHH-HHHH-HHHHhcCCCC-EEEecCCCCCcHHHHHhhhcccC
Q 016612 47 YDYTRSGNP-TRDALESLLAKLDK----AD-RALCFTSGM-AALA-AVTHLLGTGE-EIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 47 ~~y~~~g~~-~~~~l~~~l~~~~g----~~-~~i~~~~gt-~al~-~~~~~~~~g~-~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
..|...|.+ +|+++.+++.+.++ .+ +.|++++|+ +++. ++.+++.+|| .|++++|+|+.+. .+++..
T Consensus 61 ~~Y~~~G~~~Lr~aia~~~~~~~~~~~~v~~~~I~it~Ga~~al~~~~~~~~~~g~~~Vlv~~P~y~~~~----~~~~~~ 136 (374)
T PRK02610 61 NRYPDGGHEALKQAIAEYVNESAAGSSQITPANISVGNGSDELIRSLLIATCLGGEGSILVAEPTFSMYG----ILAQTL 136 (374)
T ss_pred cCCCCCchHHHHHHHHHHhCccccccCCCCHHHEEEcCChHHHHHHHHHHHcCCCCCeEEEcCCChHHHH----HHHHHc
Confidence 356544665 67777777766542 33 456666665 8886 4566777886 8999999998885 566788
Q ss_pred CcEEEEeCCC------CHHHHHhhhC----CCceEEEEeCCCCCCcccccHHHHHHHHHH-cCCEEEEeCCCCCCCcc--
Q 016612 118 GVVVKRVNTC------DLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHA-HGALLLVDNSIMSPVLS-- 184 (386)
Q Consensus 118 g~~~~~v~~~------d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~~i~~la~~-~~~~li~D~a~~~~~~~-- 184 (386)
|++++.++.+ |+++++++++ +++++|++++||||||.+.+.+++.++++- ++++||+||+|..-...
T Consensus 137 g~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~~~k~i~l~~P~NPTG~~~s~~~l~~l~~~~~~~~iI~De~Y~~~~~~~~ 216 (374)
T PRK02610 137 GIPVVRVGRDPETFEIDLAAAQSAIEQTQNPPVRVVFVVHPNSPTGNPLTAAELEWLRSLPEDILVVIDEAYFEFSQTTL 216 (374)
T ss_pred CCEEEEecCCcccCCCCHHHHHHHHHhhcCCCceEEEEeCCCCCCCCCCCHHHHHHHHhccCCcEEEEeccccccCccch
Confidence 9999888753 6888988876 489999999999999999986665555432 48999999998632211
Q ss_pred --CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHH---HHHH
Q 016612 185 --RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVE---KQQD 259 (386)
Q Consensus 185 --~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~ 259 (386)
........+++.||||.+ |.+|+|+||++++ +.+.+.+..... ..+.+...+.++...+.......+ ...+
T Consensus 217 ~~~~~~~~~~ivi~SfSK~~-g~~GlRiG~~v~~-~~l~~~l~~~~~--~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~ 292 (374)
T PRK02610 217 VGELAQHPNWVILRTFSKAF-RLAAHRVGYAIGH-PELIAVLEKVRL--PYNLPSFSQLAAQLALEHRQELLAAIPEILQ 292 (374)
T ss_pred HHHHhcCCCEEEEEecchhc-cCcccceeeeecC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 111123468899999999 5568999999986 556555554442 234455555555555543322221 1222
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
....+.+.+++ +++..++ +..+.++++.++.......+.+.+...|+.++.
T Consensus 293 ~r~~l~~~L~~--------------~~~~~~~----p~~g~f~~~~l~~~~~~~~~~~~l~~~gi~v~~----------- 343 (374)
T PRK02610 293 ERDRLYQALQE--------------LPQLRVW----PSAANFLYLRLSQDAALAALHQALKAQGTLVRH----------- 343 (374)
T ss_pred HHHHHHHHHHh--------------CCCcEeC----CCcceEEEEeCCCCCCHHHHHHHHHHCCEEEEe-----------
Confidence 22222233322 2222211 224677888875433456677777777776542
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhcC
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRTG 384 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~ 384 (386)
.++++|||++. +++++.++.|+++++++
T Consensus 344 -----------------~~~~lRls~~~~~~~~~~l~~l~~~l~~~ 372 (374)
T PRK02610 344 -----------------TGGGLRITIGTPEENQRTLERLQAALTQL 372 (374)
T ss_pred -----------------CCCeEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 13569999974 66788999999888765
No 130
>PRK05664 threonine-phosphate decarboxylase; Reviewed
Probab=99.95 E-value=1.2e-25 Score=206.60 Aligned_cols=265 Identities=20% Similarity=0.188 Sum_probs=176.9
Q ss_pred HHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC
Q 016612 58 DALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG 137 (386)
Q Consensus 58 ~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~ 137 (386)
..+++.+++++|.++.++++++.+++..+. .+.+||+|++++|+|+.+. ..++..|++++.++.+ ++++.+
T Consensus 52 ~~Lr~~ia~~~~~~~I~it~Gs~~al~~~~-~~~~gd~v~v~~P~y~~~~----~~~~~~g~~~~~v~~~---~~~~~~- 122 (330)
T PRK05664 52 DGLEAAARAYYGAPQLLPVAGSQAAIQALP-RLRAPGRVGVLSPCYAEHA----HAWRRAGHQVRELDEA---EVEAAL- 122 (330)
T ss_pred HHHHHHHHHHhCCCCEEECcCHHHHHHHHH-HccCCCEEEEcCCChHHHH----HHHHHcCCeEEEechh---hHhhhh-
Confidence 678888899899876555554458887664 4689999999999999885 6667889999999864 455555
Q ss_pred CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc----cCCCCCCccEEEeccccccccCCCceE
Q 016612 138 PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL----SRPLELGADIVMHSATKFIAGHSDVMA 210 (386)
Q Consensus 138 ~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~----~~~~~~~~di~~~S~sK~~~g~~g~~~ 210 (386)
++++++++++|+||||.+.+ +++|.++|+++|++||+||+|..... ......+..+++.||||.+ |.+|+|+
T Consensus 123 ~~~~~v~l~nP~NPTG~~~s~~~l~~l~~~~~~~~~~iI~DE~y~~~~~~~s~~~~~~~~~vi~~~SfSK~~-gl~GlRi 201 (330)
T PRK05664 123 DSLDVLVVVNPNNPTGRRFDPARLLAWHARLAARGGWLVVDEAFMDNTPQHSLAACAHRPGLIVLRSFGKFF-GLAGARL 201 (330)
T ss_pred cCCCEEEEeCCcCCCCCccCHHHHHHHHHHHHhcCCEEEEECCcccCCCcccccccccCCCEEEEeeccccc-cCCCcce
Confidence 36889999999999999987 56677778899999999999863321 1111224569999999999 5568999
Q ss_pred EEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCc
Q 016612 211 GVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 287 (386)
Q Consensus 211 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 287 (386)
||++++ +.+.+.+..... ....+...+.++...+... ......+.++.+.+.+.+++.. +.
T Consensus 202 G~~v~~-~~l~~~~~~~~~--~~~~~~~~~~~~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~~---------~~---- 265 (330)
T PRK05664 202 GFVLAE-PALLRALAELLG--PWTVSGPTRWLAQAALADTPWQRRQRERLLAASQRLAALLRRHG---------LT---- 265 (330)
T ss_pred EEEEeC-HHHHHHHHHhcC--CCCCCHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHCC---------Cc----
Confidence 999986 456555544432 2234555555555544332 2223334444455555555431 11
Q ss_pred hhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc
Q 016612 288 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 367 (386)
Q Consensus 288 ~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 367 (386)
...+.+.++++..++ ...+.+.+...|+.+.... .++++|||++.
T Consensus 266 ------~~~~~~~f~~~~~~~---~~~~~~~l~~~gi~v~~f~--------------------------~~~~iRis~~~ 310 (330)
T PRK05664 266 ------PAGGCALFQWVRTED---AAALHEFLARRGILTRLFE--------------------------QPASLRFGLPA 310 (330)
T ss_pred ------ccCCcceEEEEecCC---HHHHHHHHHHCCeEEEECC--------------------------CCCeEEEECCC
Confidence 012233556666542 4566677777788764200 13579999984
Q ss_pred --CChHHHHHHHHHHHhc
Q 016612 368 --EDVNDLISDLDKALRT 383 (386)
Q Consensus 368 --~~~~~~i~~l~~~l~~ 383 (386)
++++++++.|++..++
T Consensus 311 ~~~~~~~l~~al~~~~~~ 328 (330)
T PRK05664 311 DEADWARLDQALLAYRKE 328 (330)
T ss_pred CHHHHHHHHHHHHHHHhh
Confidence 5688888888776654
No 131
>TIGR01977 am_tr_V_EF2568 cysteine desulfurase family protein. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family. Related families contain members active as cysteine desulfurases, selenocysteine lyases, or both. The members of this family form a distinct clade and all are shorter at the N-terminus. The function of this subfamily is unknown.
Probab=99.95 E-value=1e-25 Score=211.47 Aligned_cols=298 Identities=21% Similarity=0.199 Sum_probs=200.6
Q ss_pred chHHHHHHHHHhhcCCC---ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~---~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+..+++++.+++++|.+ +.++++++++++. ++.+++++||+|+++.+.|+++...+..+++..|.+++.++.+
T Consensus 44 ~~~~~~~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 123 (376)
T TIGR01977 44 REVEETRQLLAKLFNAPSSAHVVFTNNATTALNIALKGLLKEGDHVITTPMEHNSVARPLECLKEQIGVEITIVKCDNEG 123 (376)
T ss_pred HHHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHhccCCCCEEEECcchhhHHHHHHHHHHHHcCcEEEEEecCCCC
Confidence 46788999999999975 2445556678887 4555789999999999999988766666777779999888753
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccccc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (386)
|+++++++++++++++++++++||||.+.|+++|.++|+++|+++|+|++++.|... +....++|++++|++||+++
T Consensus 124 ~~d~~~l~~~~~~~~~~v~~~~~~n~tG~~~~~~~i~~l~~~~~~~livD~a~~~g~~~~~~~~~~~D~~~~s~~K~l~~ 203 (376)
T TIGR01977 124 LISPERIKRAIKTNTKLIVVSHASNVTGTILPIEEIGELAQENGIFFILDAAQTAGVIPIDMTELAIDMLAFTGHKGLLG 203 (376)
T ss_pred CcCHHHHHHhcCCCCeEEEEECCCCCccccCCHHHHHHHHHHcCCEEEEEhhhccCccCCCchhcCCCEEEecccccccC
Confidence 799999999889999999999999999999999999999999999999999988764 33456899999999999988
Q ss_pred CCCceEEEEEEcChhHHHHHHHh--hh-------------hcCC-CCChhhHHHHHhcCCcH-----HHHHHHHHHHHHH
Q 016612 205 HSDVMAGVLAVKGERLAKELYFL--QN-------------AEGS-GLAPFDCWICLRGVKTM-----ALRVEKQQDNAQK 263 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~--~~-------------~~~~-~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~ 263 (386)
|.| .|+++.+++...+.+... .. .... ..+......+..+++.+ ....++..+.++.
T Consensus 204 p~g--~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~l~~~ 281 (376)
T TIGR01977 204 PQG--TGGLYIREGIKLKPLKSGGTGSHSALIDQPSELPDRFESGTLNTPGIAGLNAGIKFIEKIGIANIAKKECMLTEK 281 (376)
T ss_pred CCC--ceEEEEcCCcCcCceecCCCccccccccccccchhhccCCCCCHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHH
Confidence 887 566666655321111000 00 0000 11111122222222221 1222333444445
Q ss_pred HHHHHhhCCCcceEecCCCCCCCchhhhhh-ccCCCCceEEEEeCCHHhHHHHHhhcCcc-eeccCCCCccccccccccc
Q 016612 264 IAEFLASHPRVKKVNYAGLPEHPGHELHYS-QAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~~~~G~~~~~~~~p~~~ 341 (386)
+.+.+.+.+ ++.++.+ ++...+++++|.+++. ..+.+.+.+... ++.++.|...+...++
T Consensus 282 ~~~~l~~~~--------------~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~L~~~~gi~v~~g~~~~~~~~~--- 343 (376)
T TIGR01977 282 LLNGLREIN--------------KVKIYGPADPANRVGVVSFTVEGI-DSEEVADILDEKFDIATRTGLHCAPLAHK--- 343 (376)
T ss_pred HHHHHhcCC--------------CeEEeCCCCccccCCeEEEEECCC-CHHHHHHHHhccCCEEEEcccccchHHHH---
Confidence 555554433 2222211 1122467888888654 356777887766 8887777643221111
Q ss_pred cCCCCCHHHHHhc-CCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 342 SHASIPVEVRQAR-GLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 342 ~~~~~~~~~~~~~-~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.. ....+.||+|++..++++.++.+.++|++
T Consensus 344 -----------~~g~~~~~~iRis~~~~~t~~dv~~~~~~l~~ 375 (376)
T TIGR01977 344 -----------TIGTFATGTIRLSLGYFNTEEEIEKLLEALSE 375 (376)
T ss_pred -----------HhCCCCCCeEEEecCCCCCHHHHHHHHHHHhh
Confidence 11 12357899999988888888888888765
No 132
>TIGR01979 sufS cysteine desulfurases, SufS subfamily. This model represents a subfamily of NifS-related cysteine desulfurases involved in FeS cluster formation needed for nitrogen fixation among other vital functions. Many cysteine desulfurases are also active as selenocysteine lyase and/or cysteine sulfinate desulfinase. This subfamily is associated with the six-gene SUF system described in E. coli and Erwinia as an FeS cluster formation system during oxidative stress. The active site Cys is this subfamily resembles GHHC with one or both His conserved.
Probab=99.95 E-value=1.6e-25 Score=212.00 Aligned_cols=298 Identities=22% Similarity=0.257 Sum_probs=193.6
Q ss_pred hHHHHHHHHHhhcCCC--ceEE-eCcHHHHHHHHHH-----hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKAD--RALC-FTSGMAALAAVTH-----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~-~~~gt~al~~~~~-----~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
..+++++.+++++|.+ +.++ +++++++++.+.. .+++||+|+++++.|++....+...++..|.+++.++.+
T Consensus 63 ~~~~~r~~ia~~~~~~~~~~v~~~~g~t~~l~~~~~~~~~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~~~~v~~~ 142 (403)
T TIGR01979 63 AYEAVREKVAKFINAASDEEIVFTRGTTESINLVAYSWGDSNLKAGDEIVISEMEHHANIVPWQLLAERTGATLKFIPLD 142 (403)
T ss_pred HHHHHHHHHHHHhCcCCCCeEEEeCCHHHHHHHHHHHhhhhcCCCCCEEEECcchhhHHHHHHHHHHHhcCcEEEEEecC
Confidence 4678889999999976 3454 4445688875433 258899999999999987766777777889999888753
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.++++++++++++++|+||.+.|+++|.++|+++|+++++|++++.+... +....+.|++++|+||+
T Consensus 143 ~~~~~~~~~l~~~i~~~~~lv~~~~~~~~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~g~~~~~~~~~~~d~~~~s~~K~ 222 (403)
T TIGR01979 143 DDGTLDLDDLEKLLTEKTKLVAITHVSNVLGTVNPVEEIAKLAHQVGAKVLVDGAQAVPHMPVDVQALDCDFYVFSGHKM 222 (403)
T ss_pred CCCCCCHHHHHHHhccCCeEEEEEcccccccccCCHHHHHHHHHHcCCEEEEEchhhcCccccCccccCCCEEEEecccc
Confidence 789999999999999999999999999999999999999999999999999877653 33446899999999998
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhh--------------------cCCCCCh-hhHHHHHhcCCcHHHH-HHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAP-FDCWICLRGVKTMALR-VEKQQD 259 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--------------------~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 259 (386)
+ ||.| +|+++++++ +.+.+...... ...+... .....+..+++.+... .+...+
T Consensus 223 ~-gp~G--~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~al~~al~~~~~~g~~~~~~ 298 (403)
T TIGR01979 223 Y-GPTG--IGVLYGKEE-LLEQMPPFLGGGEMIAEVSFEETTYNEAPHKFEAGTPNIAGVIGLGAAIDYLEAIGLENIEA 298 (403)
T ss_pred c-CCCC--ceEEEEchH-HHhcCCCeecCCCceeecccCccccCCChhhcCCCCccHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 7 6777 799988754 43332211100 0011111 1222222222221110 122333
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhc-cCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ-AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMP 338 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p 338 (386)
+...+.+++.+ .+..+++.+++.+. +..+++++.|.+++.. ...+.+.+..+|+.++.|.... .|
T Consensus 299 ~~~~l~~~l~~----------~l~~~~g~~~~~~~~~~~~~~~v~~~~~~~~-~~~~~~~L~~~gI~v~~g~~~~---~~ 364 (403)
T TIGR01979 299 HEHELTAYALE----------RLGEIPGLRIYGPRDAEDRGGIISFNVEGVH-PHDVGTILDEEGIAVRSGHHCA---QP 364 (403)
T ss_pred HHHHHHHHHHH----------HHhcCCCEEEeCCCCccccCceEEEEeCCcC-HHHHHHHHhhCCEEEcchhhhh---HH
Confidence 34444444332 12222233333211 1234678888875432 4567778888899888766421 11
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.....+ .++++|||++. ++++++++.|++.++.
T Consensus 365 -----------~~~~~~-~~~~iRiS~~~~~t~~di~~l~~~l~~~~~~ 401 (403)
T TIGR01979 365 -----------LMRRFG-VPATCRASFYIYNTEEDIDALVEALKKVRKF 401 (403)
T ss_pred -----------HHHHhC-CCCEEEEEeccCCCHHHHHHHHHHHHHHHHH
Confidence 001112 24679999985 5666666666665554
No 133
>PRK06939 2-amino-3-ketobutyrate coenzyme A ligase; Provisional
Probab=99.95 E-value=2.1e-25 Score=210.94 Aligned_cols=286 Identities=17% Similarity=0.166 Sum_probs=192.2
Q ss_pred CCc-hHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHH
Q 016612 53 GNP-TRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD 130 (386)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~ 130 (386)
|.+ +++++++++++++|.++.+++++|++++. ++.+++++||+|++++|.|+++... ++..+.+++.++..|++
T Consensus 84 G~~~l~~~l~~~la~~~g~~~~i~~tsG~~a~~~~~~~l~~~gd~vi~~~~~~~~~~~~----~~~~~~~~~~~~~~d~~ 159 (397)
T PRK06939 84 GTQDLHKELEEKLAKFLGTEDAILYSSCFDANGGLFETLLGKEDAIISDALNHASIIDG----VRLCKAKRYRYANNDMA 159 (397)
T ss_pred CCcHHHHHHHHHHHHHhCCCcEEEEcChHHHHHHHHHHhCCCCCEEEEEhhhhHHHHHH----HHhcCCceEEeCCCCHH
Confidence 654 89999999999999888899999987765 5566889999999999999887533 34566777778777899
Q ss_pred HHHhhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC---------CCCCCccEEE
Q 016612 131 EVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVM 195 (386)
Q Consensus 131 ~l~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~---------~~~~~~di~~ 195 (386)
++++.+++ ++++|++++.+|++|...++++|.++|+++|+++|+||+|+.+.... ....+.|+++
T Consensus 160 ~l~~~i~~~~~~~~~~~~v~~~~v~~~~G~~~~~~~l~~la~~~~~~li~De~~~~g~~~~~~~~~~~~~~~~~~~~i~~ 239 (397)
T PRK06939 160 DLEAQLKEAKEAGARHKLIATDGVFSMDGDIAPLPEICDLADKYDALVMVDDSHAVGFVGENGRGTVEHFGVMDRVDIIT 239 (397)
T ss_pred HHHHHHHhhhccCCCCeEEEEecCcCCCCCcCCHHHHHHHHHHhCCEEEEECcccccCcCCCCCCHHHHcCCCCCCcEEE
Confidence 88887753 78888888899999999999999999999999999999996543221 1112568999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHhhhh--cCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhh
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~ 270 (386)
+|+||+++|+ |+||+++++ .+.+.+...... .+....+..+.++..+++.+ ....++..++.+.+.+.+++
T Consensus 240 ~S~sK~~~g~---r~G~v~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~ 315 (397)
T PRK06939 240 GTLGKALGGA---SGGYTAGRK-EVIDWLRQRSRPYLFSNSLAPAIVAASIKVLELLEESDELRDRLWENARYFREGMTA 315 (397)
T ss_pred EECHHHhCcc---CceEEEeCH-HHHHHHHHhCccccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999542 689999874 455545432221 12222333233322222221 23334455555555566554
Q ss_pred CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHH
Q 016612 271 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 350 (386)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~ 350 (386)
.. ++.. .+.++++.+.+++.....++.+.+...|+.+..+.+ +..
T Consensus 316 ~~---------~~~~----------~~~~~~~~~~~~~~~~~~~~~~~L~~~gI~v~~~~~------~~~---------- 360 (397)
T PRK06939 316 AG---------FTLG----------PGEHPIIPVMLGDAKLAQEFADRLLEEGVYVIGFSF------PVV---------- 360 (397)
T ss_pred cC---------CCcC----------CCCCCEEEEEECCHHHHHHHHHHHHHCCceEeeeCC------CCC----------
Confidence 31 1111 123456666665444466777777777776553211 100
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcCC
Q 016612 351 RQARGLTEDLVRISVGI----EDVNDLISDLDKALRTGP 385 (386)
Q Consensus 351 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~~ 385 (386)
+.+.++||++++. +++++.++.|++++++.+
T Consensus 361 ----~~~~~~iRi~~~~~~~~~~i~~~l~~L~~~~~~~~ 395 (397)
T PRK06939 361 ----PKGQARIRTQMSAAHTKEQLDRAIDAFEKVGKELG 395 (397)
T ss_pred ----CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHHhC
Confidence 1124579999854 778888888888887654
No 134
>PRK07865 N-succinyldiaminopimelate aminotransferase; Reviewed
Probab=99.95 E-value=3.5e-25 Score=206.59 Aligned_cols=268 Identities=21% Similarity=0.261 Sum_probs=176.0
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC---C-ceEEeCcHH-HHHHHH-HHh-cCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA---D-RALCFTSGM-AALAAV-THL-LGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~---~-~~i~~~~gt-~al~~~-~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
..|... |.+ +++++.+++.+.+|. + +.|++++|+ +++..+ ..+ +++||.|++++|.|+.+. ..++..
T Consensus 56 ~~Y~~~~G~~~lr~~ia~~l~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~----~~~~~~ 131 (364)
T PRK07865 56 PGYPTTAGTPELREAIVGWLARRRGVTGLDPAAVLPVIGSKELVAWLPTLLGLGPGDVVVIPELAYPTYE----VGARLA 131 (364)
T ss_pred CCCCCccCCHHHHHHHHHHHHHHcCCCCCCcccEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcccHH----HHHHhc
Confidence 368876 876 899999999877653 2 466666665 888765 445 689999999999999885 445678
Q ss_pred CcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----C---C-
Q 016612 118 GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R---P- 186 (386)
Q Consensus 118 g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~---~- 186 (386)
|++++.++ +.+++. .+++++|++++|+||||.+.+ +++|.++|+++|++||+||+|....+. . +
T Consensus 132 g~~~~~~~--~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~~ 206 (364)
T PRK07865 132 GATVVRAD--SLTELG---PQRPALIWLNSPSNPTGRVLGVDHLRKVVAWARERGAVVASDECYLELGWDAEPVSILDPR 206 (364)
T ss_pred CCEEEecC--ChhhCC---cccceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhhhccCCCCCcccccc
Confidence 88888875 334433 267899999999999999986 678899999999999999998732211 0 1
Q ss_pred ---CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHH
Q 016612 187 ---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDN 260 (386)
Q Consensus 187 ---~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 260 (386)
...+..++++|+||.+ +.+|+|+||++++ +++.+.+.......+...+...+.++...+.. .......+.++
T Consensus 207 ~~~~~~~~~i~~~S~SK~~-~~~GlRiG~i~~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~ 284 (364)
T PRK07865 207 VCGGDHTGLLAVHSLSKQS-NLAGYRAGFVAGD-PALVAELLEVRKHAGMMVPAPVQAAMVAALGDDAHVREQRERYARR 284 (364)
T ss_pred ccCCccceEEEEeechhcc-CCCceeeEEEecC-HHHHHHHHHHHHhcCCCcCHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 0124579999999999 4568999999886 55666665555444455566666665555543 12222333344
Q ss_pred HHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 261 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 261 ~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
.+.+.+.+++.. + .+. ...++ ++++.++. ....+.+.+...|+.+.+|..+. +
T Consensus 285 ~~~l~~~L~~~g---------~------~~~----~~~~~~~~~~~~~~--~~~~~~~~l~~~gv~v~pg~~f~----~- 338 (364)
T PRK07865 285 RAVLRPALEAAG---------F------RVD----HSEAGLYLWATRGE--DCWDTVAWLAERGILVAPGDFYG----P- 338 (364)
T ss_pred HHHHHHHHHHcC---------C------ccc----CCCccEEEEEeCCC--CHHHHHHHHHHCCEEEeCccccC----c-
Confidence 444444444321 1 111 12334 45555432 13445566666788877765421 0
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEecc
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVGI 367 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~~ 367 (386)
..++++||+++.
T Consensus 339 ----------------~~~~~iRi~~~~ 350 (364)
T PRK07865 339 ----------------AGAQHVRVALTA 350 (364)
T ss_pred ----------------CCCCEEEEEecC
Confidence 025789999975
No 135
>PRK09105 putative aminotransferase; Provisional
Probab=99.95 E-value=7.9e-26 Score=210.60 Aligned_cols=270 Identities=18% Similarity=0.237 Sum_probs=175.6
Q ss_pred HHHHHHHHHhhcCCC-ceEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----C
Q 016612 57 RDALESLLAKLDKAD-RALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----D 128 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~-~~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d 128 (386)
..++++.+++++|.+ +.|++++| ++++.. +.+++++||.|++++|+|+.+. ..++..|.+++.++.+ |
T Consensus 80 ~~~Lr~aia~~~~v~~e~I~it~Gs~~ai~~~~~~l~~~gd~Vli~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d 155 (370)
T PRK09105 80 EDDLRTLFAAQEGLPADHVMAYAGSSEPLNYAVLAFTSPTAGLVTADPTYEAGW----RAADAQGAPVAKVPLRADGAHD 155 (370)
T ss_pred HHHHHHHHHHHhCcChhhEEEcCChHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEecCCCCCCCC
Confidence 567777788888766 45555555 588874 4557899999999999998885 5566889999888763 6
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCC-ccCCC----CCCccEEEeccccc
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPL----ELGADIVMHSATKF 201 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~-~~~~~----~~~~di~~~S~sK~ 201 (386)
++++++. .++++++++++|+||||.+.+.+++.++++. +++++|+||+|.... ..... .....+++.|+||.
T Consensus 156 ~~~l~~~-~~~~~~v~l~nP~NPTG~~~~~~~l~~l~~~~~~~~~lIvDEaY~~f~~~~s~~~~~~~~~~vi~~~SfSK~ 234 (370)
T PRK09105 156 VKAMLAA-DPNAGLIYICNPNNPTGTVTPRADIEWLLANKPAGSVLLVDEAYIHFSDAPSVVDLVAQRKDLIVLRTFSKL 234 (370)
T ss_pred HHHHHhc-CCCCCEEEEeCCCCCCCcCcCHHHHHHHHHhCCCCcEEEEECchHHhccCcchHHHHhhCCCEEEEecccHh
Confidence 7888776 5678999999999999999998888777754 489999999985211 11111 12356889999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEe
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVN 278 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~ 278 (386)
+ |.+|+|+||++++ +.+.+.+... .....+...+.++...+... ....+.+.++.+.+.+.|++..
T Consensus 235 ~-g~~GlRiG~~v~~-~~~i~~l~~~---~~~~~~~~~~~aa~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g------ 303 (370)
T PRK09105 235 Y-GMAGMRLGLAAAR-PDLLAKLARF---GHNPLPVPAAAAGLASLRDPKLVPQRRAENAAVREDTIAWLKKKG------ 303 (370)
T ss_pred h-cCCccceeeeecC-HHHHHHHHhc---CCCCcCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHCC------
Confidence 9 6678999999986 4455545443 22234444444444444321 2222333344444444444321
Q ss_pred cCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCC
Q 016612 279 YAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 358 (386)
Q Consensus 279 ~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 358 (386)
+ .+. ...++++.+.++. ...++.+.+...|+.++ ..+ + ..+
T Consensus 304 ---~------~~~----~~~~~f~~~~~~~--~~~~l~~~L~~~gI~v~--~~~-----~-----------------~~~ 344 (370)
T PRK09105 304 ---Y------KCT----PSQANCFMVDVKR--PAKAVADAMAKQGVFIG--RSW-----P-----------------IWP 344 (370)
T ss_pred ---C------CcC----CCCCcEEEEeCCC--CHHHHHHHHHHCCcEEe--cCC-----C-----------------CCC
Confidence 1 111 2245667666642 23456666655566552 110 0 025
Q ss_pred CeEEEEecc-CChHHHHHHHHHHH
Q 016612 359 DLVRISVGI-EDVNDLISDLDKAL 381 (386)
Q Consensus 359 ~~iRis~~~-~~~~~~i~~l~~~l 381 (386)
+++||+++. ++++.+++.|++.+
T Consensus 345 ~~~Ris~~~~~~~~~l~~al~~~~ 368 (370)
T PRK09105 345 NWVRVTVGSEEEMAAFRSAFAKVM 368 (370)
T ss_pred CeEEEEcCCHHHHHHHHHHHHHHh
Confidence 689999985 56788888887765
No 136
>PLN02483 serine palmitoyltransferase
Probab=99.95 E-value=2.5e-25 Score=213.25 Aligned_cols=327 Identities=16% Similarity=0.176 Sum_probs=212.6
Q ss_pred CccceeeccCCCCCCCCCccc-ceeeeeeeecCCCCCCC-CccccC--CCC-chHHHHHHHHHhhcCCCceEEeCcHHHH
Q 016612 8 GVSTLLMNFSNEFDPYGALST-PLYQTATFKQPSATENG-PYDYTR--SGN-PTRDALESLLAKLDKADRALCFTSGMAA 82 (386)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~-~~~y~~--~g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~a 82 (386)
+...+++|++ +++|+|...+ +..... . ...+...+ ...-++ .|. +...++|+.+++++|.++.+++++|+.+
T Consensus 97 ~~~~~~~n~~-s~~YLgl~~~~~~~~~~-~-~~ai~~~g~~~~~sr~~~g~~~~~~ele~~lA~~~g~~~ai~~~~G~~a 173 (489)
T PLN02483 97 TKTRRCLNLG-SYNYLGFAAADEYCTPR-V-IESLKKYSASTCSSRVDGGTTKLHRELEELVARFVGKPAAIVFGMGYAT 173 (489)
T ss_pred CCCceEEEee-cCCccCcCCCCHHHHHH-H-HHHHHHhCCCCCccccccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHH
Confidence 4467899999 9999999843 211110 0 10111111 111233 343 5899999999999999999999999866
Q ss_pred H-HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-------CCc-----e-EEEEeCC
Q 016612 83 L-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-------PWT-----K-LVWVESP 148 (386)
Q Consensus 83 l-~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-------~~~-----~-~v~~~~~ 148 (386)
. .++.+++++||.|+++++.|++.. ..++..|++++.++..|.+++++.+. +++ + +|++++.
T Consensus 174 n~~~i~al~~~Gd~Vi~d~~~h~s~~----~~~~~~Ga~v~~~~~~d~~~le~~l~~~i~~~~p~t~~p~~k~livve~v 249 (489)
T PLN02483 174 NSTIIPALIGKGGLIISDSLNHNSIV----NGARGSGATIRVFQHNTPSHLEEVLREQIAEGQPRTHRPWKKIIVIVEGI 249 (489)
T ss_pred HHHHHHHhCCCCCEEEEcchhhHHHH----HHHHHcCCeEEEEeCCCHHHHHHHHHhhhhccccccccCCceEEEEECCC
Confidence 5 456678999999999999999875 44567899999999888888876553 222 4 5556688
Q ss_pred CCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----------CCCCCCccEEEeccccccccCCCceEEEEEEcCh
Q 016612 149 TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 149 ~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----------~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
.|++|.+.++++|.++|+++|+++|+||+|+.+... .....+.|++++|+||++++ . +||++++ +
T Consensus 250 ~s~~G~~~~l~~I~~la~~~~~~livDEa~s~g~~G~~G~g~~~~~~v~~~~~dI~~~SfSKs~g~-~---GG~i~~~-~ 324 (489)
T PLN02483 250 YSMEGELCKLPEIVAVCKKYKAYVYLDEAHSIGAVGKTGRGVCELLGVDPADVDIMMGTFTKSFGS-C---GGYIAGS-K 324 (489)
T ss_pred CCCCCcccCHHHHHHHHHHcCCEEEEECcCccCccCCCCCchHHhcCCCcccCcEEEEecchhccc-C---ceEEEcC-H
Confidence 899999999999999999999999999999755421 11123679999999999954 3 5999876 4
Q ss_pred hHHHHHHHhhhh--cCCCCChhhHHHHHhcCC---------cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCc
Q 016612 219 RLAKELYFLQNA--EGSGLAPFDCWICLRGVK---------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 287 (386)
Q Consensus 219 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 287 (386)
++.+.+...... .+...++.....+..+++ ....+.+++.++.+.+.+.|++.. +
T Consensus 325 ~li~~l~~~~~~~~~~~~~~p~~~~~~~aaL~~l~~~~g~~~~~~~~~~l~~~~~~l~~~L~~~G---------~----- 390 (489)
T PLN02483 325 ELIQYLKRTCPAHLYATSMSPPAVQQVISAIKVILGEDGTNRGAQKLAQIRENSNFFRSELQKMG---------F----- 390 (489)
T ss_pred HHHHHHHHhCccccccCCcCHHHHHHHHHHHHHHHhCccccchHHHHHHHHHHHHHHHHHHHHCC---------C-----
Confidence 566655543221 222333333322223221 123345566677777777776542 1
Q ss_pred hhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc
Q 016612 288 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI 367 (386)
Q Consensus 288 ~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 367 (386)
.++. ...++++++.+.+......+.+.+...|+.+.+.. +|+. ....+.+|++++.
T Consensus 391 -~v~~---~~~sp~~~l~l~~~~~~~~~~~~Ll~~GI~v~~~~------fp~~--------------p~~~~~vRi~isa 446 (489)
T PLN02483 391 -EVLG---DNDSPVMPIMLYNPAKIPAFSRECLKQNVAVVVVG------FPAT--------------PLLLARARICISA 446 (489)
T ss_pred -cccC---CCCCCEEEEEECCHHHHHHHHHHHHHCCcEEeeeC------CCCC--------------CCCCceEEEEeCC
Confidence 1110 11245666666554445567777766777655311 1211 1124569999974
Q ss_pred ----CChHHHHHHHHHHHhcC
Q 016612 368 ----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 368 ----~~~~~~i~~l~~~l~~~ 384 (386)
++++++++.|.++++..
T Consensus 447 ~~t~edId~~l~~L~~~~~~~ 467 (489)
T PLN02483 447 SHSREDLIKALEVISEVGDLV 467 (489)
T ss_pred CCCHHHHHHHHHHHHHHHHHh
Confidence 77777778887776654
No 137
>COG0156 BioF 7-keto-8-aminopelargonate synthetase and related enzymes [Coenzyme metabolism]
Probab=99.95 E-value=2.8e-25 Score=202.35 Aligned_cols=323 Identities=22% Similarity=0.192 Sum_probs=234.3
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCC-CCCccccCC--CC-chHHHHHHHHHhhcCCCceEEeCcHHHHH-HH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATE-NGPYDYTRS--GN-PTRDALESLLAKLDKADRALCFTSGMAAL-AA 85 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~y~~~--g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al-~~ 85 (386)
.+++|++ +|||+|...-|.+....... +.. .....-++. |+ +...++|+.+++++|.+.+++++||..|. .+
T Consensus 39 ~~~~nf~-SNdYLGLa~~~~~~~a~~~~--~~~~g~g~~gsR~i~G~~~~h~~LE~~lA~f~g~e~al~f~SGy~AN~~~ 115 (388)
T COG0156 39 RKVLNFC-SNDYLGLASHPELIEAAKAA--IRRYGVGAGGSRLISGTSDLHVELEEELADFLGAEAALLFSSGFVANLGL 115 (388)
T ss_pred ceeEeee-ccCcccccCCHHHHHHHHHH--HHHhCCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEEcccchhHHHH
Confidence 5689999 99999999888644222111 111 112223442 66 58999999999999999999999998665 57
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC------CceEEEEeCCCCCCcccccHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l~ 159 (386)
+.++++++|.|+.....|-+.. .-++..+.+++.+...|+++|++.+.+ +.++|+++.+..+.|.+.|++
T Consensus 116 i~~l~~~~dli~~D~lnHASii----dG~rls~a~~~~f~HnD~~~Le~~l~~~~~~~~~~~~IvtegVfSMdGdiApL~ 191 (388)
T COG0156 116 LSALLKKGDLIFSDELNHASII----DGIRLSRAEVRRFKHNDLDHLEALLEEARENGARRKLIVTEGVFSMDGDIAPLP 191 (388)
T ss_pred HHHhcCCCcEEEEechhhhhHH----HHHHhCCCcEEEecCCCHHHHHHHHHhhhccCCCceEEEEeccccCCCCcCCHH
Confidence 7778999999999988997764 445577889999999999999999864 358888999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCccCCC----------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPVLSRPL----------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~~~~~~----------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~ 229 (386)
+|++++++|+.++++||+|+.|.+.... ....||+++|++|.+++ .+|++.++ ..+.+.+.....
T Consensus 192 ~l~~L~~ky~a~L~VDEAHa~Gv~G~~GrG~~e~~g~~~~~vdi~~gTlsKAlGs----~Gg~v~g~-~~~~d~L~~~ar 266 (388)
T COG0156 192 ELVELAEKYGALLYVDEAHAVGVLGPNGRGLAEHFGLEPEEVDIIVGTLGKALGS----SGGYIAGS-AALIDYLRNRAR 266 (388)
T ss_pred HHHHHHHHhCcEEEEEccccccccCCCCccHHHHhCCCCccceEEEEEchhhhcc----cCceeeCc-HHHHHHHHHhCC
Confidence 9999999999999999999988775211 12348999999999954 26888876 556555544322
Q ss_pred --hcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE
Q 016612 230 --AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF 304 (386)
Q Consensus 230 --~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~ 304 (386)
.+.+.++|....+...+++. ...++++++++...+...+.... +... ...++++.+
T Consensus 267 ~~ifStalpP~~aaa~~~al~~l~~~~~~r~~L~~~~~~~~~~~~~~~---------~~~~----------~s~s~I~pv 327 (388)
T COG0156 267 PFIFSTALPPAVAAAALAALRILEEGPERRERLQELAAFFRSLLKALG---------LVLL----------PSESPIIPV 327 (388)
T ss_pred ceeccCCCCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC---------CccC----------CCCCCeeee
Confidence 34567777776666555443 34555666666666554433321 1111 335788999
Q ss_pred EeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 305 LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 305 ~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.+.++..+.++.+.+...|+.+.. +.+|.. ..+...+|++++..++++.|+.+.++|.+.
T Consensus 328 ~~gd~~~a~~~s~~l~~~Gi~v~~------i~~PTV--------------p~gtarlRi~lta~ht~~~I~~l~~~l~~~ 387 (388)
T COG0156 328 ILGDEERALEASRALLEEGIYVSA------IRPPTV--------------PKGTARLRITLTAAHTEEDIDRLAEALSEV 387 (388)
T ss_pred EeCCHHHHHHHHHHHHHCCeeEee------ecCCCC--------------CCCcceEEEEecCCCCHHHHHHHHHHHHhh
Confidence 998877777777777777775443 334422 112456999999988999999999888764
No 138
>PLN03227 serine palmitoyltransferase-like protein; Provisional
Probab=99.95 E-value=2.9e-25 Score=207.81 Aligned_cols=333 Identities=12% Similarity=0.150 Sum_probs=209.8
Q ss_pred eccCCCCCCCCCcccceeeeeeee---cCCCCCCC-CccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHH-HHHHHH
Q 016612 14 MNFSNEFDPYGALSTPLYQTATFK---QPSATENG-PYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAA-LAAVTH 88 (386)
Q Consensus 14 ~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~-~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~a-l~~~~~ 88 (386)
+|++ +|||+|....|.+...... +......+ ...|++. ....++|+.+++++|.++.+++++|+.+ +.++.+
T Consensus 1 ~~f~-s~dyLgl~~~~~~~~~~~~a~~~~g~~~~~sr~~yg~~--~~~~~LE~~lA~~~g~e~al~~~sG~~a~~~~i~~ 77 (392)
T PLN03227 1 LNFA-THDFLSTSSSPTLRQTALESLSHYGCGSCGPRGFYGTI--DAHLELEQCMAEFLGTESAILYSDGASTTSSTVAA 77 (392)
T ss_pred CCCc-CcCccCCCCCHHHHHHHHHHHHHhCCCCcccccccCCh--HHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHH
Confidence 4788 8999999988865422211 11111111 1113322 3788999999999999999999999855 557778
Q ss_pred hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHh---hhC-----------CCceEEEEeCCCCCCcc
Q 016612 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVAS---AIG-----------PWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 89 ~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~---~~~-----------~~~~~v~~~~~~nptG~ 154 (386)
++++||+|+++++.|+++...+ ...+.+++.++..|.+++++ .+. +++++|++++++||+|.
T Consensus 78 l~~~GD~Vl~~~~~h~s~~~~~----~l~~~~~~~~~~~d~~~l~~~~~~i~~~~~a~~~~~~~~t~~vi~E~v~~~~G~ 153 (392)
T PLN03227 78 FAKRGDLLVVDRGVNEALLVGV----SLSRANVRWFRHNDMKDLRRVLEQVRAQDVALKRKPTDQRRFLVVEGLYKNTGT 153 (392)
T ss_pred hCCCCCEEEEeccccHHHHHHH----HHcCCeEEEeCCCCHHHHHHHHHHhhhhccccccccCCCcEEEEEcCCcCCCCc
Confidence 9999999999999998886433 23445777777766665554 332 36889999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCCCCCCccC-----------CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHH
Q 016612 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (386)
Q Consensus 155 ~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-----------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~ 223 (386)
+.|+++|.++|++||+++|+||+++.+.... ....++|+++.|++|.+ |+ ++|+++++ +++.+.
T Consensus 154 i~~l~~i~~l~~~~g~~livDe~~~~g~~g~~G~g~~~~~g~~p~~~~Div~~slsk~~-g~---~gg~v~~~-~~~~~~ 228 (392)
T PLN03227 154 LAPLKELVALKEEFHYRLILDESFSFGTLGKSGRGSLEHAGLKPMVHAEIVTFSLENAF-GS---VGGMTVGS-EEVVDH 228 (392)
T ss_pred ccCHHHHHHHHHHcCCEEEEECcccccccCCCCCcHHHHcCCCCCCCceEEEeechhhh-hc---cCcEEecC-HHHHHH
Confidence 9999999999999999999999998554321 11236799999999987 43 35888776 445544
Q ss_pred HHHhh--hhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCch-hhhhhccCC
Q 016612 224 LYFLQ--NAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH-ELHYSQAKG 297 (386)
Q Consensus 224 ~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~-~i~~~~~~~ 297 (386)
++... ..++..+++..+++...++.. ...+.++..++.+.+.+.+++.. .+.+.+..+. .+. ...
T Consensus 229 ~~~~~~~~~~~~~~~p~~~~aa~~al~~~~~~~~~~~~l~~~~~~l~~~L~~~~------~~~~~~~rg~~~~~---~~~ 299 (392)
T PLN03227 229 QRLSGSGYCFSASAPPFLAKADATATAGELAGPQLLNRLHDSIANLYSTLTNSS------HPYALKLRNRLVIT---SDP 299 (392)
T ss_pred HHHhCcCccccCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHhcC------CccccccccccccC---CCC
Confidence 43322 223334445444444433322 23455666677777777776421 1111111110 011 123
Q ss_pred CCceEEEEeCCHHh---------HHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-
Q 016612 298 AGSVLSFLTGSLAL---------SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI- 367 (386)
Q Consensus 298 ~~~~~~~~~~~~~~---------~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~- 367 (386)
.++++.+.+.+... ...+.+.+..+|+.+...........| ..++..+|++++.
T Consensus 300 ~~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~Gi~~~~~~~~~~~~~~----------------~~P~~~iR~~~~~~ 363 (392)
T PLN03227 300 ISPIIYLRLSDQEATRRTDETLILDQIAHHSLSEGVAVVSTGGHVKKFLQ----------------LVPPPCLRVVANAS 363 (392)
T ss_pred CCCEEEEEeCCHHHhhhhhhhhHHHHHHHHHHHCCCEEEecccccCCcCC----------------CCCCceEEEEecCC
Confidence 57889998855322 246777777777765321111100011 1124559999975
Q ss_pred ---CChHHHHHHHHHHHhc
Q 016612 368 ---EDVNDLISDLDKALRT 383 (386)
Q Consensus 368 ---~~~~~~i~~l~~~l~~ 383 (386)
++++++++.|++++++
T Consensus 364 ~t~eei~~~~~~l~~~~~~ 382 (392)
T PLN03227 364 HTREDIDKLLTVLGEAVEA 382 (392)
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 6666666666666654
No 139
>TIGR00858 bioF 8-amino-7-oxononanoate synthase. This model represents 8-amino-7-oxononanoate synthase, the BioF protein of biotin biosynthesis. This model is based on a careful phylogenetic analysis to separate members of this family from 2-amino-3-ketobutyrate and other related pyridoxal phosphate-dependent enzymes. In several species, including Staphylococcus and Coxiella, a candidate 8-amino-7-oxononanoate synthase is confirmed by location in the midst of a biotin biosynthesis operon but scores below the trusted cutoff of this model.
Probab=99.94 E-value=4.9e-25 Score=205.64 Aligned_cols=321 Identities=21% Similarity=0.220 Sum_probs=210.1
Q ss_pred ceeeccCCCCCCCCC-cccceeeeeeeecCCCCCCCCccccCC-CC-chHHHHHHHHHhhcCCCceEEeCcHHHHH-HHH
Q 016612 11 TLLMNFSNEFDPYGA-LSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAAL-AAV 86 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al-~~~ 86 (386)
..+++++ +++++|. .+|.+.++........ ..+...|... |. +...++++.++++++.++.+++++|++++ .++
T Consensus 16 ~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~G~~~~~~~l 93 (360)
T TIGR00858 16 RRLLNFS-SNDYLGLASHPEVIQAAQQGAEQY-GAGSTASRLVSGNSPLHEELEEELAEWKGTEAALLFSSGYLANVGVI 93 (360)
T ss_pred ceEEecc-cCCcccCCCCHHHHHHHHHHHHhc-CCCCCCcCcccCCcHHHHHHHHHHHHHhCCCCEEEECchHHHHHHHH
Confidence 3578888 4567885 4445544322111110 1111122222 54 47889999999999988899999998665 455
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC----CceEEEEeCCCCCCcccccHHHHH
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~----~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
.+++++||+|++++|.|+++.. .++..|.+++.++..|++++++.+++ +++++++++++|++|...++++|.
T Consensus 94 ~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l~~~~~~~~~~~~~~v~~~~~~~~~G~~~~~~~i~ 169 (360)
T TIGR00858 94 SALVGKGDLILSDALNHASLID----GCRLSGARVRRYRHNDVEHLERLLEKNRGERRKLIVTDGVFSMDGDIAPLPQLV 169 (360)
T ss_pred HHhCCCCCEEEEEccccHHHHH----HHHhcCCceEEecCCCHHHHHHHHHHcccCCCeEEEEeCCccCCCCCcCHHHHH
Confidence 6678999999999999988863 34567888888888899999988863 578999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCCCCccCC----------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh--
Q 016612 163 EMAHAHGALLLVDNSIMSPVLSRP----------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-- 230 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~~~~~~~~----------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~-- 230 (386)
++|+++|+++|+||+|+.+.+... ...+.|+++.|+||++++ . +||++++ +++.+.+......
T Consensus 170 ~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~s~sK~~~~-~---gG~~~~~-~~~~~~~~~~~~~~~ 244 (360)
T TIGR00858 170 ALAERYGAWLMVDDAHGTGVLGEDGRGTLEHFGLKPEPVDIQVGTLSKALGS-Y---GAYVAGS-QALIDYLINRARTLI 244 (360)
T ss_pred HHHHHcCcEEEEECcccccCcCCCCCchHHhcCCCccCCcEEEEechhhhhc-c---CcEEEcC-HHHHHHHHHhCccce
Confidence 999999999999999975543210 113678999999999954 3 4888876 4455544332221
Q ss_pred cCCCCChhhHHHHHhcCC---cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC
Q 016612 231 EGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 307 (386)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 307 (386)
.+...++.+..+...+++ ......++..++.+.+.+.|++.+ +. +. ...++++++.++
T Consensus 245 ~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~~---------~~------~~----~~~~~~~~~~~~ 305 (360)
T TIGR00858 245 FSTALPPAVAAAALAALELIQEEPWRREKLLALIARLRAGLEALG---------FT------LM----PSCTPIVPVIIG 305 (360)
T ss_pred ecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC---------Cc------cC----CCCCCEEEEEeC
Confidence 122334443333333332 112334555666666666666432 11 11 124678888886
Q ss_pred CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 016612 308 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 308 ~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
......++.+.+...|+.+.++.... .+ ...+++||+++....++.++.+.++|
T Consensus 306 ~~~~~~~~~~~l~~~gI~v~~~~~~~---~~-----------------~~~~~iRis~~~~~~~~~i~~~l~~l 359 (360)
T TIGR00858 306 DNASALALAEELQQQGIFVGAIRPPT---VP-----------------AGTSRLRLTLSAAHTPGDIDRLAEAL 359 (360)
T ss_pred CHHHHHHHHHHHHHCCeeEeeeCCCC---CC-----------------CCCceEEEEEcCCCCHHHHHHHHHhh
Confidence 65446678888888888776543210 00 12457999998766666666665554
No 140
>TIGR03402 FeS_nifS cysteine desulfurase NifS. Members of this protein family are NifS, one of several related families of cysteine desulfurase involved in iron-sulfur (FeS) cluster biosynthesis. NifS is part of the NIF system, usually associated with other nif genes involved in nitrogenase expression and nitrogen fixation. The protein family is given a fairly broad interpretation here. It includes a clade nearly always found in extended nitrogen fixation genomic regions, plus a second clade more closely related to the first than to IscS and also part of NifS-like/NifU-like systems. This model does not extend to a more distantly clade found in the epsilon proteobacteria such as Helicobacter pylori, also named NifS in the literature, built instead in TIGR03403.
Probab=99.94 E-value=3.2e-25 Score=208.12 Aligned_cols=304 Identities=19% Similarity=0.192 Sum_probs=190.3
Q ss_pred hHHHHHHHHHhhcCCC-c-eEEeCcHHHHHHH-HHHhc---CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 56 TRDALESLLAKLDKAD-R-ALCFTSGMAALAA-VTHLL---GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~-~i~~~~gt~al~~-~~~~~---~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
..+++++.+++++|.+ + .+++++||++++. +..++ .+||+|+++..+|+++...+... +..|++++.++.+
T Consensus 43 ~~~~~r~~la~~~g~~~~~i~~t~~~t~a~~~al~~~~~~~~~~~~vv~~~~~~~s~~~~~~~~-~~~G~~v~~v~~~~~ 121 (379)
T TIGR03402 43 AVEEAREQVAKLLGAEPDEIIFTSGGTESDNTAIKSALAAQPEKRHIITTAVEHPAVLSLCQHL-EKQGYKVTYLPVDEE 121 (379)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhcCCCCeEEEcccccHHHHHHHHHH-HHcCCEEEEEccCCC
Confidence 5778889999999976 3 5555566798864 44432 56789999999998887666443 4579999988753
Q ss_pred ---CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 ---d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|++++++.++++++++++++++|+||.+.|+++|.++|+++|+++++|++++.|..+ +....++|++++|++|+ .
T Consensus 122 g~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~I~~l~~~~g~~vivD~~~~~g~~~~~~~~~~~D~~~~s~~K~-~ 200 (379)
T TIGR03402 122 GRLDLEELRAAITDDTALVSVMWANNETGTIFPIEEIGEIAKERGALFHTDAVQAVGKIPIDLKEMNIDMLSLSGHKL-H 200 (379)
T ss_pred CcCCHHHHHHhcCCCcEEEEEEcccCCeeecccHHHHHHHHHHcCCEEEEECcccccccccCcccCCCCEEEEcHHHc-C
Confidence 789999999999999999999999999999999999999999999999999988754 44457899999999995 5
Q ss_pred cCCCceEEEEEEcChhHHHHHHH---hhhhcCCC-CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEec
Q 016612 204 GHSDVMAGVLAVKGERLAKELYF---LQNAEGSG-LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 279 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 279 (386)
||.| .|+++.+++........ .......+ .+......+..+++......+...++.+.+.+++.+.
T Consensus 201 gp~G--~g~l~v~~~~~~~p~~~g~~~~~~~~~gt~~~~~~~~l~~al~~~~~~~~~~~~~~~~l~~~l~~~-------- 270 (379)
T TIGR03402 201 GPKG--VGALYIRKGTRFRPLLRGGHQERGRRAGTENVPGIVGLGKAAELATEHLEEENTRVRALRDRLEAG-------- 270 (379)
T ss_pred CCCc--eEEEEECCCCCCCCcccCCccCCCcCCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH--------
Confidence 7888 78998875431110000 00000111 1222222222233222222333334444444443321
Q ss_pred CCCC-CCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCC-
Q 016612 280 AGLP-EHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT- 357 (386)
Q Consensus 280 ~~l~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~- 357 (386)
+. .+++..+.........+++.+.+.... .+.+...+..+||.++.|..++.-... +......+|..
T Consensus 271 --l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~gI~v~~g~~c~~~~~~--------~~~~~~~lg~~~ 339 (379)
T TIGR03402 271 --LLARIPDARLNGDPTKRLPNTVNISFEYIE-GEAILLLLDMEGICASSGSACTSGSLE--------PSHVLRAMGVPH 339 (379)
T ss_pred --HHhhCCCEEEeCCCccCCCCEEEEEecCCC-HHHHHHhhccCCEEEEchhhcCCCCCC--------cCHHHHHcCCCh
Confidence 11 022222221111111346666665433 567788888889998888753321110 11122333332
Q ss_pred ---CCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 358 ---EDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 358 ---~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
.+.||+|++. ++++++++.|+++++
T Consensus 340 ~~~~~~vR~S~~~~~t~~di~~~~~~l~~~~~ 371 (379)
T TIGR03402 340 TAAHGSIRFSLSRYNTEEDIDYVLEVLPPIIA 371 (379)
T ss_pred hhcCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 4789999986 555555555555443
No 141
>PRK03317 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.4e-26 Score=213.69 Aligned_cols=282 Identities=16% Similarity=0.182 Sum_probs=188.1
Q ss_pred CccccCCCCc-hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 46 PYDYTRSGNP-TRDALESLLAKLDKAD---RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 46 ~~~y~~~g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
...|...|.+ +++++.+++.+.+|.+ +.|++++|+ +++..+ .+++++||.|+++.|+|+.+. ..++..|.
T Consensus 59 ~~~Y~~~g~~~lr~aia~~~~~~~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~v~v~~P~y~~~~----~~~~~~g~ 134 (368)
T PRK03317 59 LNRYPDRDAVALRADLAAYLTAQTGVGLTVENVWAANGSNEILQQLLQAFGGPGRTALGFVPSYSMHP----IIARGTHT 134 (368)
T ss_pred hccCCCCchHHHHHHHHHHhhhhccCCCChhhEEECCCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHhcCC
Confidence 3566555665 7888888887766542 566666665 888755 557899999999999998885 44557788
Q ss_pred EEEEeCCC-----CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc---CCC---
Q 016612 120 VVKRVNTC-----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---RPL--- 187 (386)
Q Consensus 120 ~~~~v~~~-----d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~---~~~--- 187 (386)
+++.++.. |++++++++. ++++++++++|+||||.+.+.+++.++++..++++|+||+|+..... ...
T Consensus 135 ~~~~~~~~~~~~~d~~~l~~~~~~~~~~~i~l~~p~NPtG~~~~~~~l~~l~~~~~~~lI~DE~y~~~~~~~~~~~~~~~ 214 (368)
T PRK03317 135 EWVEGPRAADFTLDVDAAVAAIAEHRPDVVFLTSPNNPTGTALPLDDVEAILDAAPGIVVVDEAYAEFRRSGTPSALTLL 214 (368)
T ss_pred eeEEcccCCCCCCCHHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHCCceEEEeCCchhhcccCCcCHHHHH
Confidence 88877642 7899998886 57899999999999999999999999999999999999998732111 001
Q ss_pred -CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH---HHHHHHHHHHHH
Q 016612 188 -ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQK 263 (386)
Q Consensus 188 -~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 263 (386)
.....+++.|+||.++ .+|+|+||++++ +++.+.+..... ....++..+.++...++... ...++..++.+.
T Consensus 215 ~~~~~~i~~~SfSK~~g-~~GlRiG~~~~~-~~~~~~l~~~~~--~~~~s~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~ 290 (368)
T PRK03317 215 PEYPRLVVSRTMSKAFA-FAGGRLGYLAAA-PAVVDALRLVRL--PYHLSAVTQAAARAALRHADELLASVAALRAERDR 290 (368)
T ss_pred HhCCCEEEEEechhhhc-cchhhhhhhhCC-HHHHHHHHhcCC--CCCCCHHHHHHHHHHhhCHHHHHHHHHHHHHHHHH
Confidence 1234688999999994 457999999986 556555554332 33456666666555554322 122223333333
Q ss_pred HHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-EeCCHHhHHHHHhhcCcceeccCCCCcccccccccccc
Q 016612 264 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 342 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~ 342 (386)
+.+.+++.. + .+. ...++++.| .+.+ ...+.+.+...|+.+...+
T Consensus 291 l~~~L~~~g---------~------~~~----~~~~~~~~~~~~~~---~~~~~~~l~~~Gv~v~~~~------------ 336 (368)
T PRK03317 291 VVAWLRELG---------L------RVA----PSDANFVLFGRFAD---RHAVWQGLLDRGVLIRDVG------------ 336 (368)
T ss_pred HHHHHHHCC---------C------EeC----CCCCcEEEEeccCC---HHHHHHHHHHCCEEEEeCC------------
Confidence 444443321 1 111 123455555 3332 4556666666777654321
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 016612 343 HASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 383 (386)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 383 (386)
.++++|++++. ++++.+++.++++++.
T Consensus 337 --------------~~~~iRi~~~~~~~~~~~~~~l~~~~~~ 364 (368)
T PRK03317 337 --------------IPGWLRVTIGTPEENDAFLAALAEVLAT 364 (368)
T ss_pred --------------CCCeEEEecCCHHHHHHHHHHHHHHHHH
Confidence 14679999974 6778888888887753
No 142
>PRK04781 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=2.5e-25 Score=207.04 Aligned_cols=278 Identities=18% Similarity=0.204 Sum_probs=184.9
Q ss_pred chHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+...++++.+++++|.+ +.|++++|+ +++..+ ..++++| |.|++++|.|+.+. ..++..|.+++.++..
T Consensus 59 ~~~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~~~~g~~~vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~ 134 (364)
T PRK04781 59 PQPPGLRSALAALYGCAPEQLLIGRGSDEAIDLLVRALCVPGRDAVLVTPPVFGMYA----VCARLQNAPLVEVPLVDGA 134 (364)
T ss_pred CCHHHHHHHHHHHhCcChHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecCCCc
Confidence 33567888888888876 456666665 888754 5567888 79999999987664 4456778999888752
Q ss_pred -----CHHHHHhh-hCCCceEEEEeCCCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCCcc-C----CCCCCccEE
Q 016612 128 -----DLDEVASA-IGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLS-R----PLELGADIV 194 (386)
Q Consensus 128 -----d~~~l~~~-~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~~~-~----~~~~~~di~ 194 (386)
|++++.+. ..++++++++++|+||||.+.+.+++.++++. ++++||+||+|...... . ....+..++
T Consensus 135 ~~~~~d~~~l~~~~~~~~~~lv~l~~p~NPTG~~~~~~~~~~l~~~~~~~~~iI~Deay~~f~~~~~~~~~~~~~~~vi~ 214 (364)
T PRK04781 135 DGFHADVPAIVAAALASNAKLVFLCSPSNPAGSAIALDQIERALQALQGKALVVVDEAYGEFSDVPSAVGLLARYDNLAV 214 (364)
T ss_pred cCCCcCHHHHHHHHhccCCeEEEEcCCCCCCCCCcCHHHHHHHHHhCCCCcEEEEeCcchhhcCCcchHHHHhhCCCEEE
Confidence 46666544 35789999999999999999998887777765 47899999998632211 1 112356799
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHh
Q 016612 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLA 269 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~ 269 (386)
+.||||.+ |.+|+|+||++++ +++.+.+...... .+.+...+.++...+.. +....+...++.+.+.+.++
T Consensus 215 ~~SfSK~~-gl~GlRvGy~v~~-~~l~~~l~~~~~~--~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~ 290 (364)
T PRK04781 215 LRTLSKAH-ALAAARIGSLIAN-AELIAVLRRCQAP--YPVPTPCAALAEQALSAPALAVTARRVAEVRAERERLHAALA 290 (364)
T ss_pred EecChhhc-ccccceeeeeeCC-HHHHHHHHhccCC--CCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999 5568999999986 4566656554432 23444444444333322 22223334444445555554
Q ss_pred hCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHH
Q 016612 270 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 349 (386)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~ 349 (386)
+.+ +.... . +..|.++++.+++ .+++.+.+...|+.+++|..+.
T Consensus 291 ~~~--------------~~~~~--~-p~~g~f~~~~~~~---~~~~~~~l~~~gI~v~~~~~~~---------------- 334 (364)
T PRK04781 291 QLP--------------GVRRV--Y-PSQGNFLLVRFDD---AEAAFQALLAAGVVVRDQRAAP---------------- 334 (364)
T ss_pred hCC--------------CCCeE--C-CCCCcEEEEEcCC---HHHHHHHHHHCCeEEeeCCCCC----------------
Confidence 332 11100 1 2347888888864 3456677777888877765311
Q ss_pred HHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 016612 350 VRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 382 (386)
Q Consensus 350 ~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 382 (386)
+ .++++||+++. ++++.+++.|++...
T Consensus 335 -----~-~~~~~Ris~~~~~~~~~l~~al~~~~~ 362 (364)
T PRK04781 335 -----R-LSDALRITLGTPEQNDRVLAALQRTQA 362 (364)
T ss_pred -----C-CCCeEEEeCCCHHHHHHHHHHHHHHHh
Confidence 1 25689999985 778899998887654
No 143
>PTZ00376 aspartate aminotransferase; Provisional
Probab=99.94 E-value=1.3e-25 Score=211.89 Aligned_cols=200 Identities=16% Similarity=0.115 Sum_probs=139.3
Q ss_pred CCCccccCC-CCc-hHHHHHHHHHhhcCC---CceEE---eCcHHHHHHHHH----HhcCCCCEEEecCCCCCcHHHHHh
Q 016612 44 NGPYDYTRS-GNP-TRDALESLLAKLDKA---DRALC---FTSGMAALAAVT----HLLGTGEEIVAGDDLYGGTDRLLS 111 (386)
Q Consensus 44 ~~~~~y~~~-g~~-~~~~l~~~l~~~~g~---~~~i~---~~~gt~al~~~~----~~~~~g~~Vlv~~~~~~~~~~~~~ 111 (386)
....+|++. |.+ +|+++.+++.+..+. ++.|+ +.++++|+..+. ++++|||+|++++|+|+.+.
T Consensus 63 ~~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~v~~~~t~G~~~al~~~~~~l~~~~~~Gd~Vlv~~P~y~~~~---- 138 (404)
T PTZ00376 63 NLDKEYLPIEGLQSFIEAAQKLLFGEASYALAEKRIATVQALSGTGALRLGFEFLKRFLPAGTTVYVSNPTWPNHV---- 138 (404)
T ss_pred cCCCCCCCCCCCHHHHHHHHHHhcCCCccccccCeEEEeeccCcchHHHHHHHHHHHhcCCCCEEEEcCCCchhHH----
Confidence 344779987 887 888888888665431 23444 445557775432 56799999999999999985
Q ss_pred hhcccCCcEEEEeCC---C----CHHHHHhhhC---CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCC
Q 016612 112 RVTPKTGVVVKRVNT---C----DLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~---~----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~ 178 (386)
.+++..|.+++.+++ + |++.+++.+. ++++++++++||||||.+.+ +++|.++|++|+++||+||+|
T Consensus 139 ~~~~~~G~~~~~v~l~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y 218 (404)
T PTZ00376 139 NIFKSAGLNVKEYRYYDPKTKGLDFDGMLEDLRTAPNGSVVLLHACAHNPTGVDPTEEQWKEIADVMKRKNLIPFFDMAY 218 (404)
T ss_pred HHHHHcCCceeeccccCcccCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEehhh
Confidence 567788999999986 2 6888888874 45678888999999999986 778899999999999999998
Q ss_pred CCCCccC-----------CCCCCccEEEeccccccccCCCceEEEEE--EcChhHHHHH----HHhhhhcCCCCChhhHH
Q 016612 179 MSPVLSR-----------PLELGADIVMHSATKFIAGHSDVMAGVLA--VKGERLAKEL----YFLQNAEGSGLAPFDCW 241 (386)
Q Consensus 179 ~~~~~~~-----------~~~~~~di~~~S~sK~~~g~~g~~~G~i~--~~~~~~~~~~----~~~~~~~~~~~~~~~~~ 241 (386)
..-.+.. ....+..+++.|+||.+ +.+|+|+||++ ..++.+.+.+ ...........+...+.
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRvG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~q~ 297 (404)
T PTZ00376 219 QGFASGDLDKDAYAIRLFAERGVEFLVAQSFSKNM-GLYGERIGALHIVCANKEEAANVLSQLKLIIRPMYSSPPIHGAR 297 (404)
T ss_pred cCccCCCHHHHHHHHHHHHhcCCcEEEEEeCCCcc-cccccccceEEEEeCCHHHHHHHHHHHHHHHhhhcCCCchHHHH
Confidence 6332211 01113579999999999 55689999984 3345443322 22222222334445555
Q ss_pred HHHhcCC
Q 016612 242 ICLRGVK 248 (386)
Q Consensus 242 ~~~~~~~ 248 (386)
++...++
T Consensus 298 ~~~~~l~ 304 (404)
T PTZ00376 298 IADRILS 304 (404)
T ss_pred HHHHHhC
Confidence 5555444
No 144
>PRK13392 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=4e-25 Score=209.32 Aligned_cols=325 Identities=18% Similarity=0.161 Sum_probs=206.5
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccc-cCCCCc-hHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHH
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDY-TRSGNP-TRDALESLLAKLDKADRALCFTSGMAALA-AVTH 88 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y-~~~g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~ 88 (386)
.+++++ +|+|+|..++|.........-+....+.... ..+|.. ...++++.+++++|.++.+++++|+++.. ++..
T Consensus 47 ~~~~~~-sn~yl~l~~~p~v~~a~~~~~~~~~~~~~~s~~~~~~~~~~~~Le~~la~~~g~~~~i~~~sG~~a~~~~i~~ 125 (410)
T PRK13392 47 RVTIWC-SNDYLGMGQHPDVIGAMVDALDRYGAGAGGTRNISGTSHPHVLLERELADLHGKESALLFTSGYVSNDAALST 125 (410)
T ss_pred eEEEEE-CCCccCCCCCHHHHHHHHHHHHHcCCCCchhhhcccChHHHHHHHHHHHHHhCCCCEEEECcHHHHHHHHHHH
Confidence 477888 8999999877754321111100000011111 112443 67899999999999889999999997765 4433
Q ss_pred hc--CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC----CCceEEEEeCCCCCCcccccHHHHH
Q 016612 89 LL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 89 ~~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
+. .+|+.|+++...|.++.. .++..|.++..++..|.+++++.+. +++++|++++|+||+|.+.|+++|.
T Consensus 126 l~~~~~g~~vi~~~~~h~s~~~----~~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~t~~v~i~~~~n~tG~~~~l~~i~ 201 (410)
T PRK13392 126 LGKLLPGCVILSDALNHASMIE----GIRRSGAEKQVFRHNDLADLEEQLASVDPDRPKLIAFESVYSMDGDIAPIEAIC 201 (410)
T ss_pred HhcCCCCCEEEEehhhhHHHHH----HHHHcCCeEEEEeCCCHHHHHHHHHhccCCCCEEEEEeCCCCCCcccccHHHHH
Confidence 43 489988887777776643 3445778877777667777666553 5789999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCCCCccCC---------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh--c
Q 016612 163 EMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--E 231 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~~~~~~~~---------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--~ 231 (386)
++|+++|+++|+||+|+.+.+... .....|+++.|+||+++.+ +||++++ +++.+.++..... .
T Consensus 202 ~l~~~~~~~livDea~~~g~~g~~g~g~~~~~~~~~~~div~~tlsK~~g~~----GG~~~~~-~~~~~~l~~~~~~~~~ 276 (410)
T PRK13392 202 DLADRYNALTYVDEVHAVGLYGARGGGIAERDGLMDRIDMIQGTLAKAFGCL----GGYIAAS-ADLIDFVRSFAPGFIF 276 (410)
T ss_pred HHHHHcCCEEEEECCccccCcCCCCCchhhhccCCCCCcEEEEEChHhhhcc----cchhhcC-HHHHHHHHHhCcchhc
Confidence 999999999999999985553210 1124589999999999653 4788775 5565555444322 2
Q ss_pred CCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC
Q 016612 232 GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 308 (386)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (386)
+...++..++++..+++. .....+++.++.+.+.+.+++.. ++.. ++.++++.+.+++
T Consensus 277 s~~~~~~~~~a~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~~~~i~~~~ 337 (410)
T PRK13392 277 TTALPPAVAAGATAAIRHLKTSQTERDAHQDRVAALKAKLNANG---------IPVM----------PSPSHIVPVMVGD 337 (410)
T ss_pred cCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------CCCC----------CCCCCEEEEEeCC
Confidence 333444444444333332 22333445555666666665431 1111 2245666666655
Q ss_pred HHhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 309 LALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 309 ~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.....++.+.+. ..|+.++++.. |.. ..+.+++|++++ .++++.+++.|.+++++
T Consensus 338 ~~~~~~~~~~L~~~~GI~v~~~~~------p~~--------------~~~~~~lRis~~~~~t~edid~l~~aL~~~~~~ 397 (410)
T PRK13392 338 PTLCKAISDRLMSEHGIYIQPINY------PTV--------------PRGTERLRITPTPLHDDEDIDALVAALVAIWDR 397 (410)
T ss_pred HHHHHHHHHHHHHhCCEEEeeeCC------CCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 444567777764 56887665322 100 112467999985 37777788888777766
Q ss_pred CC
Q 016612 384 GP 385 (386)
Q Consensus 384 ~~ 385 (386)
.+
T Consensus 398 ~~ 399 (410)
T PRK13392 398 LE 399 (410)
T ss_pred cC
Confidence 54
No 145
>TIGR03539 DapC_actino succinyldiaminopimelate transaminase. This family of actinobacterial succinyldiaminopimelate transaminase enzymes (DapC) are members of the pfam00155 superfamily. Many of these genes appear adjacent to other genes encoding enzymes of the lysine biosynthesis via diaminopimelate pathway (GenProp0125).
Probab=99.94 E-value=1.7e-24 Score=201.19 Aligned_cols=269 Identities=19% Similarity=0.231 Sum_probs=176.1
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCcHH-HHHHHHHH-h-cCCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSGM-AALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~gt-~al~~~~~-~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
...|... |.+ +++++.+++.+.+|.+ +.|++++|+ +++..+.. + +++||.|++++|+|+++. ..++.
T Consensus 49 ~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~I~it~G~~~~i~~~~~~l~~~~gd~Vl~~~p~y~~~~----~~~~~ 124 (357)
T TIGR03539 49 APGYPQTWGTPELREAIVDWLERRRGVPGLDPTAVLPVIGTKELVAWLPTLLGLGPGDTVVIPELAYPTYE----VGALL 124 (357)
T ss_pred hCCCCcccCCHHHHHHHHHHHHHhcCCCCCCcCeEEEccChHHHHHHHHHHHcCCCCCEEEECCCCcHHHH----HHHHh
Confidence 3568776 776 8999999998876532 556666664 88876544 5 689999999999998885 33456
Q ss_pred CCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-------CC
Q 016612 117 TGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------RP 186 (386)
Q Consensus 117 ~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-------~~ 186 (386)
.|.+++.++ +++++. .+++++|++++|+||||.+++ +++|.++|+++|+++|+||+|..-.+. ++
T Consensus 125 ~g~~~~~v~--~~~~l~---~~~~~~v~~~~p~NPtG~~~~~~~~~~i~~~a~~~~~~ii~De~y~~~~~~~~~~~~~~~ 199 (357)
T TIGR03539 125 AGATPVAAD--DPTELD---PVGPDLIWLNSPGNPTGRVLSVDELRAIVAWARERGAVVASDECYLELGWEGRPVSILDP 199 (357)
T ss_pred cCCEEeccC--ChhhcC---ccCccEEEEeCCCCCcCccCCHHHHHHHHHHHHHcCeEEEEecchhhhccCCCCccceec
Confidence 788887775 443332 368999999999999999986 678999999999999999998521110 11
Q ss_pred ----CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHH
Q 016612 187 ----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQD 259 (386)
Q Consensus 187 ----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~ 259 (386)
......+++.|+||.+ +.+|+|+||++++ +.+.+.+.......+...+...+.++...+... ......+.+
T Consensus 200 ~~~~~~~~~vi~~~S~SK~~-~~~G~R~G~~i~~-~~~~~~~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~ 277 (357)
T TIGR03539 200 RVCGGDHTGLLAVHSLSKRS-NLAGYRAGFVAGD-PALVAELLTVRKHAGLMVPAPVQAAMVAALGDDGHVAEQKARYAA 277 (357)
T ss_pred ccCCCccccEEEEecccccc-CCCceeEEEEecC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 1123569999999998 4568999999976 556655655554444455665666555555431 112223334
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCce-EEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV-LSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMP 338 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p 338 (386)
+.+.+.+.+++.. +. +. ...+++ +++.++. ....+.+.+...|+.+.+|..+.
T Consensus 278 ~~~~~~~~L~~~g---------~~------~~----~p~~~~~~~~~~~~--~~~~~~~~l~~~gV~v~pg~~f~----- 331 (357)
T TIGR03539 278 RRAQLKPALEKAG---------FR------ID----HSEAGLYLWATRGE--DAWDTVDRLAELGILVAPGDFYG----- 331 (357)
T ss_pred HHHHHHHHHHHcC---------CC------Cc----CCCccEEEEEECCC--CHHHHHHHHHhCCEEECCccccC-----
Confidence 4444445554321 11 11 123444 4444432 24456666777788877766421
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEecc
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISVGI 367 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~ 367 (386)
...+++||||++.
T Consensus 332 ----------------~~~~~~iRis~~~ 344 (357)
T TIGR03539 332 ----------------PAGSQHVRVALTA 344 (357)
T ss_pred ----------------CCCCCeEEEEecC
Confidence 0125789999986
No 146
>TIGR01141 hisC histidinol-phosphate aminotransferase. Histidinol-phosphate aminotransferase is a pyridoxal-phosphate dependent enzyme.
Probab=99.94 E-value=1.5e-25 Score=207.92 Aligned_cols=271 Identities=20% Similarity=0.226 Sum_probs=183.1
Q ss_pred HHHHHHHHhhcCCC-ceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CH
Q 016612 58 DALESLLAKLDKAD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL 129 (386)
Q Consensus 58 ~~l~~~l~~~~g~~-~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~ 129 (386)
.++++.++++++.+ +.+++++| ++++. ++..++++||+|++++|+|+.+. ..++..|.+++.++.+ |+
T Consensus 57 ~~lr~~ia~~~~~~~~~i~~~~G~~~~l~~~~~~l~~~gd~v~~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~ 132 (346)
T TIGR01141 57 AELKQALADYYGVDPEQILLGNGSDEIIELLIRAFLEPGDAVLVPPPTYSMYE----ISAKIHGAEVVKVPLDEDGQLDL 132 (346)
T ss_pred HHHHHHHHHHhCcChHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEeccCCCCCCCH
Confidence 67888888888765 44555555 58886 45567899999999999997653 4456789999888753 78
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCcc-CC---C-CCCccEEEecccccc
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RP---L-ELGADIVMHSATKFI 202 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~-~~---~-~~~~di~~~S~sK~~ 202 (386)
+++++.+++++++|++++|+||||.+.+++++.++|+.+ ++++|+|++|+.-... +. . ..+.+++++|+||++
T Consensus 133 ~~l~~~~~~~~~~v~l~~p~NptG~~~~~~~~~~l~~~~~~~~~ii~D~~y~~~~~~~~~~~~~~~~~~~i~~~S~sK~~ 212 (346)
T TIGR01141 133 EDILVAIDDKPKLVFLCSPNNPTGNLLSRSDIEAVLERTPEDALVVVDEAYGEFSGEPSTLPLLAEYPNLIVLRTLSKAF 212 (346)
T ss_pred HHHHHhcCCCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhhcCCccHHHHHhhCCCEEEEehhhHhh
Confidence 999998888999999999999999999999999999887 9999999998721111 11 1 123568899999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEec
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNY 279 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 279 (386)
|.+|+|+||++++ +.+.+.+...... .+.+...+.++...++.. ....++..++.+.+.+.+++.+
T Consensus 213 -g~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~------- 281 (346)
T TIGR01141 213 -GLAGLRIGYAIAN-AEIIDALNKVRAP--FNLSRLAQAAAIAALRDDDFIEKTVEEINAERERLYDGLKKLP------- 281 (346)
T ss_pred -hchhhhceeeecC-HHHHHHHHhccCC--CCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC-------
Confidence 4557899999986 4555555544322 334555555554444432 2233444455555555555432
Q ss_pred CCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCC
Q 016612 280 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 359 (386)
Q Consensus 280 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 359 (386)
+..+. +..++++++.++. ..+++.+.+...|+.+.+|..+. +. ++
T Consensus 282 -------g~~~~----~~~g~~~~~~~~~--~~~~~~~~L~~~gI~v~~g~~f~---------------------~~-~~ 326 (346)
T TIGR01141 282 -------GLEVY----PSDANFVLIRFPR--DADALFEALLEKGIIVRDLNSYP---------------------GL-PN 326 (346)
T ss_pred -------CCEEC----CCcCCEEEEecCC--CHHHHHHHHHHCCeEEEeCCCcC---------------------CC-CC
Confidence 11111 1236788888864 35677777778888877765421 11 56
Q ss_pred eEEEEeccCChHHHHHHHHHHH
Q 016612 360 LVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 360 ~iRis~~~~~~~~~i~~l~~~l 381 (386)
++|+|++. ++.++.+.++|
T Consensus 327 ~iRls~~~---~~~i~~~~~~l 345 (346)
T TIGR01141 327 CLRITVGT---REENDRFLAAL 345 (346)
T ss_pred eEEEecCC---HHHHHHHHHHh
Confidence 79999873 33444444443
No 147
>cd06453 SufS_like Cysteine desulfurase (SufS)-like. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to cysteine desulfurase (SufS) and selenocysteine lyase. SufS catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine; and selenocysteine lyase catalyzes the decomposition of L-selenocysteine.
Probab=99.94 E-value=3.5e-25 Score=207.56 Aligned_cols=291 Identities=22% Similarity=0.231 Sum_probs=192.9
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCcHHHHHH-HHHHhcC---CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLG---TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~gt~al~-~~~~~~~---~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
...++++.+++++|.+ +.++++++++++. ++.++.. +||+|+++++.|++....+..+++..|.+++.++.+
T Consensus 44 ~~~~~~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~ 123 (373)
T cd06453 44 AYEAAREKVARFINAPSPDEIIFTRNTTEAINLVAYGLGRANKPGDEIVTSVMEHHSNIVPWQQLAERTGAKLKVVPVDD 123 (373)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEeCCHHHHHHHHHHHhhhcCCCCCEEEECcchhHHHHHHHHHHHhhcCcEEEEeecCC
Confidence 4677889999999876 4556666678887 4555655 899999999999987655556677889999988764
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|++++++.+++++++|++++++||||.+.|+++|.++|+++|++|++|++++.+... +....+.|++++|++|++
T Consensus 124 ~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 203 (373)
T cd06453 124 DGQLDLEALEKLLTERTKLVAVTHVSNVLGTINPVKEIGEIAHEAGVPVLVDGAQSAGHMPVDVQDLGCDFLAFSGHKML 203 (373)
T ss_pred CCCcCHHHHHHHhcCCceEEEEeCcccccCCcCCHHHHHHHHHHcCCEEEEEhhhhcCceeeeccccCCCEEEecccccc
Confidence 899999999989999999999999999999999999999999999999999877653 233458999999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhc--------------------CC-CCChhhHHHHHhcCC-----cHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAE--------------------GS-GLAPFDCWICLRGVK-----TMALRVEK 256 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~--------------------~~-~~~~~~~~~~~~~~~-----~~~~~~~~ 256 (386)
++ .| +|+++++++ +.+.+....... .. ..+......+..+++ .+....++
T Consensus 204 ~~-~g--~g~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~al~~al~~l~~~g~~~~~~~ 279 (373)
T cd06453 204 GP-TG--IGVLYGKEE-LLEEMPPYGGGGEMIEEVSFEETTYADLPHKFEAGTPNIAGAIGLGAAIDYLEKIGMEAIAAH 279 (373)
T ss_pred CC-CC--cEEEEEchH-HhhcCCCeecCCCccccccccccccCCCccccCCCCCCHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 66 54 699988754 433332221100 00 111111111112222 12222333
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLIS 336 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~ 336 (386)
..+..+.+.+.+++.+ ++.++. .+...+++++|.++.. ...++.+.+...|+.+..|....
T Consensus 280 ~~~~~~~l~~~l~~~~--------------~~~~~~-~~~~~~~~~~~~~~~~-~~~~i~~~l~~~gi~i~~g~~~~--- 340 (373)
T cd06453 280 EHELTAYALERLSEIP--------------GVRVYG-DAEDRAGVVSFNLEGI-HPHDVATILDQYGIAVRAGHHCA--- 340 (373)
T ss_pred HHHHHHHHHHHHhcCC--------------CeEEeC-CccccCCeEEEEECCc-CHHHHHHHHHHCCEEeccCccch---
Confidence 3344444444444432 222221 1123467888888653 35677777777788776654311
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 016612 337 MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 337 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
.|. ....+ .+++||+|++..+.++.++.+.++|
T Consensus 341 ~~~-----------~~~~~-~~~~iRis~~~~~t~~di~~~~~~l 373 (373)
T cd06453 341 QPL-----------MRRLG-VPGTVRASFGLYNTEEEIDALVEAL 373 (373)
T ss_pred hHH-----------HHHhC-CCCeEEEEecCCCCHHHHHHHHhhC
Confidence 110 00111 2467999999877777777776654
No 148
>PRK05387 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=3.4e-25 Score=206.02 Aligned_cols=273 Identities=14% Similarity=0.141 Sum_probs=179.8
Q ss_pred HHHHHHHHhhcCCC-ceEEeCcH-HHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CH
Q 016612 58 DALESLLAKLDKAD-RALCFTSG-MAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DL 129 (386)
Q Consensus 58 ~~l~~~l~~~~g~~-~~i~~~~g-t~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~ 129 (386)
.++++.++++++.+ +.|++++| ++++.. +.+++++||+|++++|+|+.+. ..++..|++++.++.+ |+
T Consensus 63 ~~lr~aia~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~d~ 138 (353)
T PRK05387 63 DALRQAIAAYYGLDPEQVFVGNGSDEVLAHAFLAFFNHDRPLLFPDITYSFYP----VYAGLYGIPYEEIPLDDDFSIDV 138 (353)
T ss_pred HHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEeCCCHHHHH----HHHHHcCCEEEEeecCCCCCCCH
Confidence 46777777777765 45555555 599875 5567899999999999997764 4456788898888764 56
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc-CCEEEEeCCCCCCCccC----CCCCCccEEEecccccccc
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAG 204 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~-~~~li~D~a~~~~~~~~----~~~~~~di~~~S~sK~~~g 204 (386)
+++++ +++++++++|+||||.+.+.+++.++++.+ ++++|+||+|....... ....+.+++++|+||.+ |
T Consensus 139 ~~l~~----~~~~v~~~~P~NPtG~~~~~~~~~~l~~~~~~~~livDe~y~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~ 213 (353)
T PRK05387 139 EDYLR----PNGGIIFPNPNAPTGIALPLAEIERILAANPDSVVVIDEAYVDFGGESAIPLIDRYPNLLVVQTFSKSR-S 213 (353)
T ss_pred HHHHh----cCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCcEEEEeCcccccCCcchHHHHhhCCCEEEEEehhHhh-c
Confidence 66653 467899999999999999999999999876 99999999985211110 11235679999999999 5
Q ss_pred CCCceEEEEEEcChhHHHHHHHhhhhc-CCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecC
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQNAE-GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYA 280 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 280 (386)
.+|+|+||++++ +++.+.+....... ....+...+.++...+.. +....++..++.+.+.+.+++..
T Consensus 214 ~~GlR~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g-------- 284 (353)
T PRK05387 214 LAGLRVGFAIGH-PELIEALNRVKNSFNSYPLDRLAQAGAIAAIEDEAYFEETRAKVIATRERLVEELEALG-------- 284 (353)
T ss_pred chhhhceeeecC-HHHHHHHHHhhccCCCCCcCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC--------
Confidence 568999999986 55656555554332 234455555555454432 22223334444445555554431
Q ss_pred CCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCe
Q 016612 281 GLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 360 (386)
Q Consensus 281 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 360 (386)
+ .+. +..++++++.+++. ...++.+.+...|+.++.... + ..+++
T Consensus 285 -~------~~~----~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~~~~------~-----------------~~~~~ 329 (353)
T PRK05387 285 -F------EVL----PSKANFVFARHPSH-DAAELAAKLRERGIIVRHFNK------P-----------------RIDQF 329 (353)
T ss_pred -C------eEC----CCcCcEEEEECCCC-CHHHHHHHHHHCCEEEEECCC------C-----------------CCCCe
Confidence 1 111 12356777776532 355666767667776542110 0 02467
Q ss_pred EEEEecc-CChHHHHHHHHHHHhc
Q 016612 361 VRISVGI-EDVNDLISDLDKALRT 383 (386)
Q Consensus 361 iRis~~~-~~~~~~i~~l~~~l~~ 383 (386)
+|+|++. ++++++++.|++++.+
T Consensus 330 iRis~~~~~~~~~~~~~L~~~~~~ 353 (353)
T PRK05387 330 LRITIGTDEEMEALVDALKEILAK 353 (353)
T ss_pred EEEEeCCHHHHHHHHHHHHHHhhC
Confidence 9999974 7778888888887653
No 149
>TIGR03403 nifS_epsilon cysteine desulfurase, NifS family, epsilon proteobacteria type. Members of this family are the NifS-like cysteine desulfurase of the epsilon division of the Proteobacteria, similar to the NifS protein of nitrogen-fixing bacteria. Like NifS, and unlike IscS, this protein is found as part of a system of just two proteins, a cysteine desulfurase and a scaffold, for iron-sulfur cluster biosynthesis. This protein is called NifS by Olsen, et al. (PubMed:11123951), so we use this designation.
Probab=99.94 E-value=1.8e-25 Score=209.93 Aligned_cols=299 Identities=16% Similarity=0.089 Sum_probs=181.0
Q ss_pred HHHHHHhhcCC--CceEE-eCcHHHHHHHHHH-h-----cCC-CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 60 LESLLAKLDKA--DRALC-FTSGMAALAAVTH-L-----LGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 60 l~~~l~~~~g~--~~~i~-~~~gt~al~~~~~-~-----~~~-g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
.++.+.+.++. .+.++ +++++++++.++. + .++ +++|+++...|+++...+. .++..|.+++.++.+
T Consensus 47 a~~~~~~~~~~~~~~~i~~t~g~teal~~~~~~~~~~~~~~~~~~~vi~~~~e~ps~~~~~~-~~~~~G~~v~~v~~~~~ 125 (382)
T TIGR03403 47 ALDKLYKGINARDLDDIIITSCATESNNWVLKGVYFDEILKGGKNHIITTEVEHPAVRATCA-FLESLGVEVTYLPINEQ 125 (382)
T ss_pred HHHHHHHHcCcCCCCeEEEeCCHHHHHHHHHHHHHHhhcccCCCCEEEEcCCccHHHHHHHH-HHHHCCCEEEEEecCCC
Confidence 33334444553 24454 5555689875433 3 245 4689999999998877664 456789999998864
Q ss_pred ---CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 ---d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|++++++.++++++++++++++||||.+.|+++|.++|+++|+++++|++++.+... +....+.|++++|++|++
T Consensus 126 g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~- 204 (382)
T TIGR03403 126 GTITAEQVREAITEKTALVSVMWANNETGMIFPIKEIGEICKERGVLFHTDAVQAIGKIPVDVQKAGVDFLSFSAHKFH- 204 (382)
T ss_pred CCCCHHHHHHhcccCCeEEEEEcccCCCccccCHHHHHHHHHHcCCEEEEechhhcCCCccCccccCCCEEEEcchhhC-
Confidence 789999999989999999999999999999999999999999999999999877653 444568999999999986
Q ss_pred cCCCceEEEEEEcChhHHHH-HHHhh--h-hcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEec
Q 016612 204 GHSDVMAGVLAVKGERLAKE-LYFLQ--N-AEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 279 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~-~~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 279 (386)
||+| .|+++.++..-... +.... . ......+......+..+++......+...++.+.+.+++.+
T Consensus 205 gp~G--~g~l~vr~~~~~~p~~~g~~~~~~~~~gt~~~~~~~al~~al~~~~~~~~~~~~~~~~l~~~l~~--------- 273 (382)
T TIGR03403 205 GPKG--VGGLYIRKGVELTPLFHGGEHMGGRRSGTLNVPYIVAMGEAMRLANEYLDFEKSHVRRLRDRLED--------- 273 (382)
T ss_pred CCCc--eEEEEECCCCCCCCcccCCCCCCCcccCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH---------
Confidence 7877 58888775421110 00000 0 00011222222222233322222222223333334433332
Q ss_pred CCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCC--
Q 016612 280 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT-- 357 (386)
Q Consensus 280 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~-- 357 (386)
+|..++++.++.+......+++.+.+++.. ...+...+..+||.++.|..++.. ... +...+...|.+
T Consensus 274 -~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~L~~~gI~v~~g~~c~~~----~~~----~~~v~~~~g~~~~ 343 (382)
T TIGR03403 274 -ALLELPDVFVVGDREHRVPNTILISIKGVE-GEAMLWDLNKAGIAASTGSACASE----DLE----ANPVMVAIGADKE 343 (382)
T ss_pred -HHhcCCCEEEECCCCCCcCCEEEEEeCCCC-HHHHHHhhccCCEEEEchhccCCC----CCC----cCHHHHHcCCChH
Confidence 233333444432211112356777776533 556667788889999887653211 000 11223333432
Q ss_pred --CCeEEEEeccCChHHHHHHHHHHH
Q 016612 358 --EDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 358 --~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
.+.||+|++..++++.++.+.++|
T Consensus 344 ~~~~~iR~s~~~~~t~~did~~~~~l 369 (382)
T TIGR03403 344 LAHTAIRLSLSRFTTEEEIDYTIEVF 369 (382)
T ss_pred HhCeeEEEECCCCCCHHHHHHHHHHH
Confidence 367999998644444444444444
No 150
>TIGR02539 SepCysS Sep-tRNA:Cys-tRNA synthase. Aminoacylation of tRNA(Cys) with Cys, and cysteine biosynthesis in the process, happens in Methanocaldococcus jannaschii and several other archaea by misacylation of tRNA(Cys) with O-phosphoserine (Sep), followed by modification of the phosphoserine to cysteine. In some species, direct tRNA-cys aminoacylation also occurs but this pathway is required for Cys biosynthesis. Members of this protein catalyze the second step in this two step pathway, using pyridoxal phosphate and a sulfur donor to synthesize Cys from Sep while attached to the tRNA.
Probab=99.94 E-value=6e-25 Score=205.08 Aligned_cols=280 Identities=16% Similarity=0.128 Sum_probs=188.8
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
+...++++.+++++|.+..+++++|++++. ++.+++++||.|+++.+.|.+.. ..++..|++++.++..
T Consensus 51 ~~~~~~~e~lA~~~g~~~~~i~~g~~~a~~~~~~~l~~~gd~Vl~~~~~h~s~~----~~~~~~g~~~~~~~~~~~~~~~ 126 (370)
T TIGR02539 51 PPIHDFLEDLAEFLGMDEARVTHGAREGKFAVMHALCKEGDWVVLDGLAHYTSY----VAAERAGLNVKEVPHTGHPEYK 126 (370)
T ss_pred hHHHHHHHHHHHHhCCCceEEECChHHHHHHHHHHhhCCCCEEEECCcccHHHH----HHHHHcCCEEEEEecCCcccCC
Confidence 467788888999999998888888889987 55667899999999988887664 3356788999888864
Q ss_pred -CHHHHHhhhC-------CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecc
Q 016612 128 -DLDEVASAIG-------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (386)
Q Consensus 128 -d~~~l~~~~~-------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~ 198 (386)
|++++++.++ +++++|++++|+||+|.+.|+++|.++|+++|+++++|++|+.+... +....+.|++++|+
T Consensus 127 ~d~~~l~~~l~~~~~~~~~~~~lv~~~~p~~~~G~~~~l~~i~~la~~~~~~livDea~~~g~~~~~~~~~~~di~v~s~ 206 (370)
T TIGR02539 127 VDPEGYGEVIEEVEDESGKPPVLALLTHVDGEYGNLPDAGKVAKVCREKGVPLLLNCAYTVGRMPVSAKEIGADFIVGSG 206 (370)
T ss_pred cCHHHHHHHHHHhhhccCCCcEEEEEECCCCCCccccCHHHHHHHHHHcCCeEEEECccccCCcCCCHHHcCCCEEEeeC
Confidence 8999998885 36889999999999999999999999999999999999999987543 23345789999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhhhcC--------CCCChhhHHHHHhcCCcHHHHH---HHHHHHHHHHHHH
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------SGLAPFDCWICLRGVKTMALRV---EKQQDNAQKIAEF 267 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~~~ 267 (386)
||++++ + .++|++++++ .+.+.+........ .............++.....+. .+..++.+++.+.
T Consensus 207 sK~~~~-~-g~~G~l~~~~-~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~l~~~~~~~~~~~~l~~~ 283 (370)
T TIGR02539 207 HKSMAA-S-GPCGVLGMSE-EWEDIVLRKSRYSPVKEVELLGCTSRGAPIVTMMASFPHVVERVKRWDEEVKKTRWFVAE 283 (370)
T ss_pred cccccC-C-CCEEEEEECH-HHHhhhcccccCCccceeeeecccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999964 3 3589999874 45454433322110 1111112222222222211222 2222334455555
Q ss_pred HhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--------HhHHHHHhhcCcceec-cCCCCcccccccc
Q 016612 268 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTKYFSIT-VSFGSVKSLISMP 338 (386)
Q Consensus 268 l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~l~~~gi~-~~~G~~~~~~~~p 338 (386)
|++.. ..++... +..++++.+.++.. .....+.+.|...|+. +++|.
T Consensus 284 L~~~g---------------~~~~~~~-~s~t~~v~~~~~~~~~~~~~~~~~~~~~~~~L~e~GI~~ir~~~-------- 339 (370)
T TIGR02539 284 LEDIG---------------FIQLGQK-PKEHDLVKFETPGFHEIAQKHKRRGYFLYEELKKRGIHGIRSGQ-------- 339 (370)
T ss_pred HHhCC---------------cEEEccC-CCcCceEEEECCchhHHhhhhccccHHHHHHHHhCCCccccCCc--------
Confidence 55432 1111001 22467777765421 1234677777777874 33211
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEe--c-cCChHHHHHHHHHHHhcC
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISV--G-IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~--~-~~~~~~~i~~l~~~l~~~ 384 (386)
++++|+++ + .++++++++.|++.++++
T Consensus 340 -------------------~~~iRis~~~~t~e~i~~l~~~L~~~~~~~ 369 (370)
T TIGR02539 340 -------------------TKYFKLSVYGLTKEQVEYVVDSFEEIVEEY 369 (370)
T ss_pred -------------------ceEEEEEecCCCHHHHHHHHHHHHHHHHhc
Confidence 34699997 3 588899999998887754
No 151
>PRK08153 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=4.2e-25 Score=206.03 Aligned_cols=282 Identities=20% Similarity=0.214 Sum_probs=188.5
Q ss_pred cccCCCCchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHH-HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 48 DYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVT-HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 48 ~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~-~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
.|.+.+ ..++++.++++++.+ +.|++++|+ +++..+. .++++||.|++++|+|+.+.. .++..|.+++.+
T Consensus 63 ~Y~~~~---~~~Lr~~ia~~~~~~~~~I~it~G~~~~l~~~~~~~~~~gd~vlv~~p~y~~~~~----~~~~~g~~~~~v 135 (369)
T PRK08153 63 KYGDPE---NHDLRHALAAHHGVAPENIMVGEGIDGLLGLIVRLYVEPGDPVVTSLGAYPTFNY----HVAGFGGRLVTV 135 (369)
T ss_pred cCCCCc---cHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCcchHHHH----HHHHcCCeEEEe
Confidence 455443 457777788888876 567777776 8887554 468999999999999988863 344578888888
Q ss_pred CCC----CHHHHHhhh-CCCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCcc---CCC--CCCcc
Q 016612 125 NTC----DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS---RPL--ELGAD 192 (386)
Q Consensus 125 ~~~----d~~~l~~~~-~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~---~~~--~~~~d 192 (386)
+.+ |++++.+.+ +++++++++++|+||||.+.+.+++.++++.. +++||+||+|..-... ... .....
T Consensus 136 p~~~~~~~~~~l~~~~~~~~~~~i~l~~P~NPtG~~~~~~~l~~l~~~~~~~~~lI~DE~y~~~~~~~~~~~~~~~~~~~ 215 (369)
T PRK08153 136 PYRDDREDLDALLDAARRENAPLVYLANPDNPMGSWHPAADIVAFIEALPETTLLVLDEAYCETAPAGAAPPIDTDDPNV 215 (369)
T ss_pred eCCCCCCCHHHHHHHhcccCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEeCchhhhcCcccchhhhhcCCCE
Confidence 753 677777655 46899999999999999999877777766543 8999999998632211 011 12356
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHh
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLA 269 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~ 269 (386)
+++.||||.+ |.+|+|+||++++ +++.+.+...... ...+...+.++...++.- ....+...++.+.+.+.++
T Consensus 216 i~~~SfSK~~-g~~GlRiG~~v~~-~~~~~~l~~~~~~--~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~~~~~L~ 291 (369)
T PRK08153 216 IRMRTFSKAY-GLAGARVGYAIGA-PGTIKAFDKVRNH--FGMNRIAQAAALAALKDQAYLAEVVGKIAAARDRIAAIAR 291 (369)
T ss_pred EEEecchHhc-cCcchheeeeecC-HHHHHHHHHhhcC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5568999999986 4565555544432 345666666665555431 1112223333344444444
Q ss_pred hCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCcceeccC-CCCccccccccccccCCCCC
Q 016612 270 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSITVS-FGSVKSLISMPCFMSHASIP 347 (386)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi~~~-~G~~~~~~~~p~~~~~~~~~ 347 (386)
+.. +. ++ +..+.++++.++ +......+++++...|+.++ +|..
T Consensus 292 ~~g---------~~------~~----p~~~~f~~~~~~~~~~~a~~l~~~l~~~Gi~v~~p~~~---------------- 336 (369)
T PRK08153 292 ANG---------LT------PL----PSATNFVAIDCGRDGAFARAVLDGLIARDIFVRMPGVA---------------- 336 (369)
T ss_pred HCC---------Cc------cC----CCcCcEEEEECCCCcccHHHHHHHHHHCCeEEeeCCCC----------------
Confidence 321 11 11 224667777764 33457788888878888764 3221
Q ss_pred HHHHHhcCCCCCeEEEEec-cCChHHHHHHHHHHHhc
Q 016612 348 VEVRQARGLTEDLVRISVG-IEDVNDLISDLDKALRT 383 (386)
Q Consensus 348 ~~~~~~~~~~~~~iRis~~-~~~~~~~i~~l~~~l~~ 383 (386)
..++++||+++ .++++.+++.|+++++.
T Consensus 337 --------~~~~~iRis~~~~~~~~~~~~al~~~~~~ 365 (369)
T PRK08153 337 --------PLDRCIRVSCGPDEELDLFAEALPEALEA 365 (369)
T ss_pred --------CCCCeEEEecCCHHHHHHHHHHHHHHHHH
Confidence 02467999997 48899999999888764
No 152
>PRK05166 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=7.6e-25 Score=204.64 Aligned_cols=273 Identities=19% Similarity=0.230 Sum_probs=183.4
Q ss_pred HHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHH
Q 016612 59 ALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLD 130 (386)
Q Consensus 59 ~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~ 130 (386)
++++.+++++|.+ +.|++++|+ ++++.+ .+++++||.|++++|+|+.+. ..++..|++++.++.+ |++
T Consensus 75 ~lr~~ia~~~~~~~~~i~~t~G~~~~l~~~~~~~~~~gd~vli~~P~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~ 150 (371)
T PRK05166 75 ALREAIAARTGVPADRIILGNGSEDLIAVICRAVLRPGDRVVTLYPSFPLHE----DYPTMMGARVERVTVTPDLGFDLD 150 (371)
T ss_pred HHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCeEEEeecCCCCCCCHH
Confidence 5777777777776 556666665 888754 557899999999999998774 4556788999888764 789
Q ss_pred HHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCCcc----CC---C-C-CCccEEEeccc
Q 016612 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLS----RP---L-E-LGADIVMHSAT 199 (386)
Q Consensus 131 ~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~~~----~~---~-~-~~~di~~~S~s 199 (386)
++++.++++++++++++|+||||.+.+.+++.++++. .++++|+||+|..-... .. . . ....+++.|+|
T Consensus 151 ~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~~~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~~vi~i~SfS 230 (371)
T PRK05166 151 ALCAAVARAPRMLMFSNPSNPVGSWLTADQLARVLDATPPETLIVVDEAYAEYAAGDDYPSALTLLKARGLPWIVLRTFS 230 (371)
T ss_pred HHHHhhhcCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECcHHHhcCCcCcccHHHHHhhcCCCEEEEeech
Confidence 9999888889999999999999999987666666654 48899999998632211 11 1 1 13568999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcce
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKK 276 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~ 276 (386)
|.+ |.+|+|+||++++++++.+.+..... ..+.+...+.++...+.. +....+.+.++.+.+.+.|++..
T Consensus 231 K~~-~l~GlRiG~~i~~~~~l~~~~~~~~~--~~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~g---- 303 (371)
T PRK05166 231 KAY-GLAGLRVGYGLVSDPELVGLLDRVRT--PFNVNGAAQAAALAALDDEEHLAKGVALALAERERLKKELAEMG---- 303 (371)
T ss_pred Hhh-hcchhheeeeecCCHHHHHHHHHhcc--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCc----
Confidence 999 55689999988766777666654432 234555555444444432 22222333344444555554331
Q ss_pred EecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 277 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 277 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+ .+. +..+.++++.++. ...++.+.+...|+.+.+|... +
T Consensus 304 -----~------~~~----p~~g~fl~~~~~~--~~~~l~~~l~~~gi~v~p~~~~----------------------~- 343 (371)
T PRK05166 304 -----Y------RIA----PSRANFLFFDARR--PASAVAEALLRQGVIVKPWKQP----------------------G- 343 (371)
T ss_pred -----C------eeC----CCcCCEEEEeCCC--CHHHHHHHHHHCCeEEecCCCC----------------------C-
Confidence 1 110 2236677777642 2456666666678877765421 1
Q ss_pred CCCeEEEEecc-CChHHHHHHHHHHHh
Q 016612 357 TEDLVRISVGI-EDVNDLISDLDKALR 382 (386)
Q Consensus 357 ~~~~iRis~~~-~~~~~~i~~l~~~l~ 382 (386)
.+++|||+++. ++.+++++.|++.+.
T Consensus 344 ~~~~iRi~~~~~~~~~~l~~~l~~i~~ 370 (371)
T PRK05166 344 FETFIRVSIGSPEENDHFVAALDKVLE 370 (371)
T ss_pred CCCeEEEEcCCHHHHHHHHHHHHHHhh
Confidence 25789999986 458888888877654
No 153
>TIGR01976 am_tr_V_VC1184 cysteine desulfurase family protein, VC1184 subfamily. This model describes a subfamily of probable pyridoxal phosphate-dependent enzymes in the aminotransferase class V family (pfam00266). The most closely related characterized proteins are active as cysteine desulfurases, selenocysteine lyases, or both; some are involved in FeS cofactor biosynthesis and are designated NifS. An active site Cys residue present in those sequences, in motifs resembling GHHC or GSAC, is not found in this family. The function of members of this family is unknown, but seems unlike to be as an aminotransferase.
Probab=99.94 E-value=1.6e-25 Score=211.61 Aligned_cols=296 Identities=24% Similarity=0.266 Sum_probs=191.9
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCc-HHHHHHHH-HH---hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 56 TRDALESLLAKLDKAD-RALCFTS-GMAALAAV-TH---LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~-gt~al~~~-~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
..+++++.+++++|.+ +.+++++ ++++++.+ .+ .++|||+|+++++.|++....+...++..|++++.++.+
T Consensus 61 ~~~~l~~~ia~~~~~~~~~v~~~~~~t~~l~~~~~~~~~~~~~gd~vl~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~ 140 (397)
T TIGR01976 61 VVDDAREAVADLLNADPPEVVFGANATSLTFLLSRAISRRWGPGDEVIVTRLDHEANISPWLQAAERAGAKVKWARVDEA 140 (397)
T ss_pred HHHHHHHHHHHHcCCCCCeEEEeCCHHHHHHHHHHHHHhcCCCCCEEEEcCCchHhHHHHHHHHHHhcCCEEEEEecccc
Confidence 6789999999999976 3455544 45777643 23 368999999999999888766666777889999888753
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|++++++.+++++++|++++|+||||.+.|+++|.++|+++|+++++|++++.+... +..+.++|++++|+||++
T Consensus 141 ~~~~~~~~l~~~i~~~~~lv~i~~~~n~tG~~~~~~~i~~~~~~~~~~~ivD~a~~~~~~~~~~~~~~~d~~~~s~~K~~ 220 (397)
T TIGR01976 141 TGELHPDDLASLLSPRTRLVAVTAASNTLGSIVDLAAITELVHAAGALVVVDAVHYAPHGLIDVQATGADFLTCSAYKFF 220 (397)
T ss_pred CCCcCHHHHHHhcCCCceEEEEeCCCCCCCccCCHHHHHHHHHHcCCEEEEehhhhccccCCCHHHcCCCEEEEechhhc
Confidence 689999999989999999999999999999999999999999999999999766543 334568999999999998
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhh---------cCCCCChh-hHHHHHhcCCcHHH---------------HHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNA---------EGSGLAPF-DCWICLRGVKTMAL---------------RVEKQ 257 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~---------~~~~~~~~-~~~~~~~~~~~~~~---------------~~~~~ 257 (386)
|+ ++|+++++++ +.+.+...... ...+..+. ....+..+++.+.. ..+..
T Consensus 221 -g~---~~G~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~gt~~~~~~~~l~~al~~~~~~g~~~~~~~~~~~~~~~~~~ 295 (397)
T TIGR01976 221 -GP---HMGILWGRPE-LLMNLPPYKLTFSYDTGPERFELGTPQYELLAGVVAAVDYLAGLGESANGSRRERLVASFQAI 295 (397)
T ss_pred -CC---ceEEEEEcHH-HHhhCCCccccCccCCCcchhcCCCCCHHHHHHHHHHHHHHHHhCcccccchhhhhhHHHHHH
Confidence 54 3799998754 43333221110 00111111 11111122211110 02223
Q ss_pred HHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhh-ccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccc
Q 016612 258 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS-QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLIS 336 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~ 336 (386)
.++...+.+++.+ +|..+++..++.+ ++...++++.+.+++. ....+.+.|..+|+.++.|..+..
T Consensus 296 ~~~~~~l~~~l~~----------~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~gI~v~~~~~~~~-- 362 (397)
T TIGR01976 296 DAYENRLAEYLLV----------GLSDLPGVTLYGVARLAARVPTVSFTVHGL-PPQRVVRRLADQGIDAWAGHFYAV-- 362 (397)
T ss_pred HHHHHHHHHHHHH----------HHhcCCCEEEeCCCCccCCCceEEEEeCCc-CHHHHHHHHHHCCeEEEeCccchH--
Confidence 3333344444432 1222222333321 1123567888887643 355677888888988776644210
Q ss_pred ccccccCCCCCHHHHHhcCC--CCCeEEEEeccCChHHHHHHHHHHH
Q 016612 337 MPCFMSHASIPVEVRQARGL--TEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 337 ~p~~~~~~~~~~~~~~~~~~--~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
+ .....++ ..++||||++..++++.++.+.++|
T Consensus 363 -~-----------~~~~~~~~~~~~~iRis~~~~~t~~di~~l~~~l 397 (397)
T TIGR01976 363 -R-----------LLRRLGLNDEGGVVRVGLAHYNTAEEVDRLLEAL 397 (397)
T ss_pred -H-----------HHHHhCCCCCCCeEEEEeeccCCHHHHHHHHHhC
Confidence 0 0011122 2467999999877888788777654
No 154
>PRK01688 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=7.4e-26 Score=209.65 Aligned_cols=272 Identities=18% Similarity=0.222 Sum_probs=179.1
Q ss_pred CchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 54 NPTRDALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
++...++++.+++++|.+ +.|++++|+ +++..+ .+++++| |.|+++.|+|+.+. ..++..|++++.++.+
T Consensus 56 ~~~~~~l~~~~a~~~g~~~~~I~~~~Gs~e~i~~~~~~~~~~g~~~vli~~P~y~~y~----~~~~~~G~~~~~v~~~~~ 131 (351)
T PRK01688 56 ECQPKAVIENYAAYAGVKPEQVLVSRGADEGIELLIRAFCEPGKDAILYCPPTYGMYS----VSAETIGVEIRTVPTLDN 131 (351)
T ss_pred CCChHHHHHHHHHHhCCCHHHEEEcCCHHHHHHHHHHHhcCCCCCEEEEcCCCHHHHH----HHHHHcCCEEEEeecCCC
Confidence 334578999999999987 566666665 888754 5577887 89999999998774 5567789999888763
Q ss_pred ---CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCcc-C----CCCCCccEEEec
Q 016612 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-R----PLELGADIVMHS 197 (386)
Q Consensus 128 ---d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~-~----~~~~~~di~~~S 197 (386)
|++++++.+ +++++|++++|+||||.+.+.+++.++++.. +.+||+||+|...... + ....+..+++.|
T Consensus 132 ~~~d~~~l~~~~-~~~~lv~l~nPnNPTG~~~~~~~l~~l~~~~~~~~~vivDEay~~f~~~~s~~~~~~~~~n~iv~rS 210 (351)
T PRK01688 132 WQLDLPAIADNL-DGVKVVYVCSPNNPTGNLINPQDLRTLLELTRGKAIVVADEAYIEFCPQASLAGWLAEYPHLVILRT 210 (351)
T ss_pred CCCCHHHHHHhc-cCCcEEEEeCCCCCCCCCCCHHHHHHHHHhCCCCcEEEEECchhhcCCCCChHHHHhhCCCEEEEec
Confidence 688898877 5899999999999999999877766666532 6899999998633211 1 112356799999
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHhhCC
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
|||++ |.+|+|+||++++ +++.+.+...... ..++...+.++...+.. +..+.+...++.+.+.+.|++.+
T Consensus 211 fSK~~-glaGlRiGy~i~~-~~~i~~l~~~~~~--~~v~~~~~~~a~~~L~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~ 286 (351)
T PRK01688 211 LSKAF-ALAGLRCGFTLAN-EEVINLLLKVIAP--YPLSTPVADIAAQALSPQGIAAMRERVAEINANRQWLIAALKEIP 286 (351)
T ss_pred chHhh-cCHHHHHhHHhCC-HHHHHHHHhccCC--CCCCHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999 6778999999986 4455555444322 23444333333333321 22223333344444555554332
Q ss_pred CcceEecCCCCCCCchh-hhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHH
Q 016612 273 RVKKVNYAGLPEHPGHE-LHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVR 351 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~ 351 (386)
+.. ++ +..+.++++.+.+ .+.+.+.+..+|+.++.+... +
T Consensus 287 --------------~~~~~~----ps~~nfi~~~~~~---~~~l~~~L~~~gi~vr~~~~~-----~------------- 327 (351)
T PRK01688 287 --------------CVEQVF----DSETNYILARFTA---SSAVFKSLWDQGIILRDQNKQ-----P------------- 327 (351)
T ss_pred --------------CCCeEC----CCCCcEEEEEcCC---HHHHHHHHHHCCeEEEECCCc-----C-------------
Confidence 111 11 2346778877753 456677777778877654321 0
Q ss_pred HhcCCCCCeEEEEecc-CChHHHHHHH
Q 016612 352 QARGLTEDLVRISVGI-EDVNDLISDL 377 (386)
Q Consensus 352 ~~~~~~~~~iRis~~~-~~~~~~i~~l 377 (386)
+ .++++|||++. ++++.+++.|
T Consensus 328 ---~-~~~~iRis~~~~~e~~~l~~al 350 (351)
T PRK01688 328 ---G-LSNCLRITIGTREECQRVIDAL 350 (351)
T ss_pred ---C-CCCeEEEeCCCHHHHHHHHHhh
Confidence 1 15689999984 5566655554
No 155
>PRK07392 threonine-phosphate decarboxylase; Validated
Probab=99.94 E-value=6.9e-25 Score=204.19 Aligned_cols=282 Identities=15% Similarity=0.132 Sum_probs=182.5
Q ss_pred ccccCCCCchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 47 YDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 47 ~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
..|...+ ..++++.++++++.+ +.|++++|+ +++..+...+.+||.|++++|+|+.+. ..++..|.+++.+
T Consensus 52 ~~Y~~~~---~~~Lr~aia~~~~v~~~~I~it~G~~~~i~~~~~~l~~g~~vlv~~P~y~~~~----~~~~~~g~~~~~v 124 (360)
T PRK07392 52 RHYPDPD---YRELRLALAQHHQLPPEWILPGNGAAELLTWAGRELAQLRAVYLITPAFGDYR----RALRAFGATVKEL 124 (360)
T ss_pred hcCCCcC---HHHHHHHHHHHhCcChhhEEECCCHHHHHHHHHHHhCCCCeEEEECCCcHHHH----HHHHHcCCeEEEE
Confidence 4465433 246666666666665 556666665 889866655668899999999998885 5566789999888
Q ss_pred CCC----------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----C----C
Q 016612 125 NTC----------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----R----P 186 (386)
Q Consensus 125 ~~~----------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----~----~ 186 (386)
+.+ +++++++.. ++++++++++||||||.+++.++|.++++++++ +|+||+|..-... . .
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~nP~NPTG~~~~~~~l~~l~~~~~~-~IiDE~y~~~~~~~~~~s~~~~~ 202 (360)
T PRK07392 125 PLPLDQPSPGLTLRLQTLPPQL-TPNDGLLLNNPHNPTGKLWSREAILPLLEQFAL-VVVDEAFMDFLPPDAEQSLIPCL 202 (360)
T ss_pred ecccccCCcccccCHHHHHHhc-cCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCE-EEEECchhhhccCccccchHHHh
Confidence 764 244444333 478999999999999999999999999999985 6669998632211 1 1
Q ss_pred CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHH---HHHHHHHHHH
Q 016612 187 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALR---VEKQQDNAQK 263 (386)
Q Consensus 187 ~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 263 (386)
...+..+++.|+||.+ +.+|+|+||+++++ .+.+.+.... .....+...+.++...++.-... .+...++.+.
T Consensus 203 ~~~~~vi~i~S~SK~~-~l~GlRiG~~v~~~-~~~~~~~~~~--~~~~~s~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~ 278 (360)
T PRK07392 203 AEYPNLIILRSLTKFY-SLPGLRLGYAIAHP-DRLQRWQQWR--DPWPVNGLAAAAAIAALADRDFQQQTWAWLPPAREA 278 (360)
T ss_pred hcCCCEEEEEechhhh-cCCchheeeeeCCH-HHHHHHHhhC--CCCCCCHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 1124579999999999 55689999999874 4545444332 22456666676666655532111 1222333333
Q ss_pred HHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhh-cCcceeccCCCCcccccccccccc
Q 016612 264 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVET-TKYFSITVSFGSVKSLISMPCFMS 342 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~-l~~~gi~~~~G~~~~~~~~p~~~~ 342 (386)
+.+.+++. +++.+. .+.+.++++.++. ...++.+. +...|+.+.+|..+.
T Consensus 279 l~~~L~~~--------------~~~~~~----~~~~~fl~~~~~~--~~~~l~~~ll~~~gv~v~pg~~f~--------- 329 (360)
T PRK07392 279 LFQGLASL--------------PGLTPL----PSAANFLLVQSQG--SALQLQEKLLQQHRILIRDCLSFP--------- 329 (360)
T ss_pred HHHHHHhC--------------CCcEEC----CCCCCEEEEEcCC--CHHHHHHHHHhhCCEEEEeCCCCC---------
Confidence 44444322 222221 2335667766643 24455555 355688877776521
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 016612 343 HASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 382 (386)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 382 (386)
+..++++||+++. ++.+++.+.+++.+.
T Consensus 330 ------------~~~~~~iRi~~~~~~~~~~l~~al~~~~~ 358 (360)
T PRK07392 330 ------------ELGDRYFRVAVRTEAENQRLLEALAAILA 358 (360)
T ss_pred ------------CCCCCEEEEEeCCHHHHHHHHHHHHHHhh
Confidence 1135789999986 457888888887664
No 156
>PRK08354 putative aminotransferase; Provisional
Probab=99.94 E-value=1.7e-24 Score=197.31 Aligned_cols=263 Identities=17% Similarity=0.162 Sum_probs=171.9
Q ss_pred HHHHHHHHHhhcCCCceEEeCcH-HHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhh
Q 016612 57 RDALESLLAKLDKADRALCFTSG-MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASA 135 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~~~i~~~~g-t~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 135 (386)
...+++.+++++|. + |++++| ++++..+..++.+||.|++++|+|+.+. .+++..|.+++.++ .|++.+++.
T Consensus 42 ~~~l~~~ia~~~~~-~-I~vt~G~~~al~~~~~~~~~gd~vlv~~P~y~~~~----~~~~~~g~~~~~~~-~d~~~l~~~ 114 (311)
T PRK08354 42 YEWLEEEFSKLFGE-P-IVITAGITEALYLIGILALRDRKVIIPRHTYGEYE----RVARFFAARIIKGP-NDPEKLEEL 114 (311)
T ss_pred hHHHHHHHHHHHCC-C-EEECCCHHHHHHHHHHhhCCCCeEEEeCCCcHHHH----HHHHHcCCEEeecC-CCHHHHHHh
Confidence 45678888888873 4 555555 5888866666669999999999999885 56678899998876 478899888
Q ss_pred hCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccccCCCceEE
Q 016612 136 IGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAG 211 (386)
Q Consensus 136 ~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~g~~g~~~G 211 (386)
++ +++++++++|+||||.+.+ +++|.++|+++|+++|+||+|...... .....+..+++.|+||.+ +.+|+|+|
T Consensus 115 ~~-~~~~vi~~~P~NPTG~~~~~~~l~~l~~~a~~~~~~li~De~y~~f~~~~~~~~~~~vi~~~S~SK~~-~l~GlRiG 192 (311)
T PRK08354 115 VE-RNSVVFFCNPNNPDGKFYNFKELKPLLDAVEDRNALLILDEAFIDFVKKPESPEGENIIKLRTFTKSY-GLPGIRVG 192 (311)
T ss_pred hc-CCCEEEEecCCCCCCCccCHHHHHHHHHHhhhcCcEEEEeCcchhccccccccCCCcEEEEeccHhhc-CCccceee
Confidence 76 5788999999999999986 677888889999999999998643322 112245689999999999 55689999
Q ss_pred EEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhh
Q 016612 212 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 291 (386)
Q Consensus 212 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~ 291 (386)
|+++ +.+.+..... ....+..+..++...++.. .+...++.+.+.+..+... ..+. .
T Consensus 193 ~~v~----~~~~l~~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~l~-------~~l~-~------ 249 (311)
T PRK08354 193 YVKG----FEEAFRSVRM--PWSIGSTGYAFLEFLIEDD---FEHLRKTMPLIWREKERFE-------KALY-V------ 249 (311)
T ss_pred eeee----hHHHHHHcCC--CccCCHHHHHHHHHHHHhH---HHHHHHHHHHHHHHHHHHH-------HhcC-C------
Confidence 9998 2233333322 1233333333332222210 1122222222222211110 0110 0
Q ss_pred hhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-CCh
Q 016612 292 YSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDV 370 (386)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~ 370 (386)
.+.++++.+.+.+ ..++.+.+...|+.+.+|..+. .++++||+++. ++.
T Consensus 250 ----~~~~~~~~~~~~~---~~~~~~~l~~~gv~v~~g~~f~-----------------------~~~~iRi~~~~~~~~ 299 (311)
T PRK08354 250 ----KSDANFFIKDVGD---AEKFVEFLKRNGILVRDCTSFG-----------------------LPGYIRFSVRDREEN 299 (311)
T ss_pred ----CCCCcEEEEECCC---HHHHHHHHHHCCeEEEecccCC-----------------------CCCeEEEEeCCHHHH
Confidence 1245667676543 3456666777788888876521 14679999986 668
Q ss_pred HHHHHHHHHHH
Q 016612 371 NDLISDLDKAL 381 (386)
Q Consensus 371 ~~~i~~l~~~l 381 (386)
+++++.|++.+
T Consensus 300 ~~l~~al~~~~ 310 (311)
T PRK08354 300 EKLIRALREWR 310 (311)
T ss_pred HHHHHHHHHhh
Confidence 88888887643
No 157
>cd06452 SepCysS Sep-tRNA:Cys-tRNA synthase. This family belongs to the pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Cys-tRNA(Cys) is produced by O-phosphoseryl-tRNA synthetase which ligates O-phosphoserine (Sep) to tRNA(Cys), and Sep-tRNA:Cys-tRNA synthase (SepCysS) converts Sep-tRNA(Cys) to Cys-tRNA(Cys), in methanogenic archaea. SepCysS forms a dimer, each monomer is composed of a large and small domain; the larger, a typical pyridoxal 5'-phosphate (PLP)-dependent-like enzyme fold. In the active site of each monomer, PLP is covalently bound to a conserved Lys residue near the dimer interface.
Probab=99.94 E-value=6.3e-25 Score=204.59 Aligned_cols=166 Identities=21% Similarity=0.228 Sum_probs=135.7
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
++|...++++.+++++|.++.++++++++++. ++.+++++||+|+++++.|.+.. ..++..|++++.++.+
T Consensus 42 ~~~~~~~l~~~la~~~g~~~i~~~~g~t~al~~~l~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~ 117 (361)
T cd06452 42 EKPPIKDFHHDLAEFLGMDEARVTPGAREGKFAVMHSLCEKGDWVVVDGLAHYTSY----VAAERAGLNVREVPNTGHPE 117 (361)
T ss_pred cCchHHHHHHHHHHHcCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEcCCcchHHH----HHHHhcCCEEEEEecCCCCC
Confidence 34678999999999999977777777788987 55567899999999999887775 3456788999888642
Q ss_pred ---CHHHHHhhhC-------CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEe
Q 016612 128 ---DLDEVASAIG-------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMH 196 (386)
Q Consensus 128 ---d~~~l~~~~~-------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~ 196 (386)
|+++++++++ +++++|++++|+||+|...|+++|.++|+++|+++|+|++|+.+... .....+.|++++
T Consensus 118 ~~~d~~~l~~~l~~~~~~~~~~~~lv~l~~p~n~tG~~~~~~~i~~~~~~~~~~vivD~a~~~g~~~~~~~~~~~d~~~~ 197 (361)
T cd06452 118 YHITPEGYAEVIEEVKDEFGKPPALALLTHVDGNYGNLHDAKKIAKVCHEYGVPLLLNGAYTVGRMPVSGKELGADFIVG 197 (361)
T ss_pred cccCHHHHHHHHHHHhhccCCCceEEEEECCCCCCeeeccHHHHHHHHHHcCCeEEEECCcccCCcCCCHHHcCCCEEEe
Confidence 6788888775 37899999999999999999999999999999999999999877643 334568899999
Q ss_pred ccccccccCCCceEEEEEEcChhHHHHHH
Q 016612 197 SATKFIAGHSDVMAGVLAVKGERLAKELY 225 (386)
Q Consensus 197 S~sK~~~g~~g~~~G~i~~~~~~~~~~~~ 225 (386)
|+||+++++. ++|++++++ .+.+.+.
T Consensus 198 s~~K~l~~~~--~~G~l~~~~-~~~~~l~ 223 (361)
T cd06452 198 SGHKSMAASA--PIGVLATTE-EWADIVF 223 (361)
T ss_pred cCCccccCCC--CeEEEEECH-HHHHHHh
Confidence 9999996543 689999874 4544443
No 158
>PRK13393 5-aminolevulinate synthase; Provisional
Probab=99.94 E-value=1.1e-24 Score=205.89 Aligned_cols=325 Identities=18% Similarity=0.180 Sum_probs=209.5
Q ss_pred ceeeccCCCCCCCCCccccee-eeeeeecCCCCCCCCccccC-CCC-chHHHHHHHHHhhcCCCceEEeCcHHHHHHHHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLY-QTATFKQPSATENGPYDYTR-SGN-PTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~~~~~~~~~~y~~-~g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~ 87 (386)
-.+++++ +|+|+|..+.|.. ++........ ..+...+.. .+. +...++++.+++++|.+..++++||+++...++
T Consensus 45 ~~~~~~~-sn~ylgl~~~p~v~~a~~~~~~~~-~~~~~~s~~~~~~~~~~~~le~~la~~~g~~~~~~~~SG~~An~~ai 122 (406)
T PRK13393 45 REVTVWC-SNDYLGMGQHPAVLAAMHEALDTC-GAGAGGTRNISGTNHYHVLLEAELADLHGKEAALLFTSGYVSNWAAL 122 (406)
T ss_pred ccEEEee-cccccCCCCCHHHHHHHHHHHHHc-CCCCcccccccCChHHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHH
Confidence 4588999 9999999776644 3211111110 011111111 243 478999999999999999999999998876444
Q ss_pred H-hcC--CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC----CCceEEEEeCCCCCCcccccHHH
Q 016612 88 H-LLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 88 ~-~~~--~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
. +.. +||.|++.+..|+++...+ ...|.+++.++..|++++++.++ +++++|++++++|++|.+.|+++
T Consensus 123 ~~l~~~~~g~~I~~~~~~H~s~~~~~----~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~~G~~~~l~~ 198 (406)
T PRK13393 123 STLGSRLPGCVILSDELNHASMIEGI----RHSRAEKRIFRHNDPADLERKLSDLDPHRPKLVAFESVYSMDGDIAPIAE 198 (406)
T ss_pred HHhhcCCCCCEEEEccchhHHHHHHH----HHcCCeEEEeCCCCHHHHHHHHHhccCCCCEEEEEcCCCCCCCchhCHHH
Confidence 4 444 7887878777887776443 34567777788778888887764 36789999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCCCCCCccCC---------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh-
Q 016612 161 IAEMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA- 230 (386)
Q Consensus 161 i~~la~~~~~~li~D~a~~~~~~~~~---------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~- 230 (386)
|.++|+++|+++|+||+|+.|.+... .....|++++|++|.++.+ +||++++ +++.+.+......
T Consensus 199 i~~l~~~~~~~livDea~~~g~~g~~G~g~~~~~~~~~~~~i~~~tlsKa~g~~----GG~~~~~-~~~~~~l~~~~~~~ 273 (406)
T PRK13393 199 ICDVAEKHGAMTYLDEVHAVGLYGPRGGGIAEREGLADRLTIIEGTLAKAFGVM----GGYITGS-AALCDFIRSFASGF 273 (406)
T ss_pred HHHHHHHcCCEEEEECCccccccCCCCCchhhhcCCCCCCeEEEEeCchhhccc----CceeeCC-HHHHHHHHHhCcCc
Confidence 99999999999999999985543211 1123588889999999643 4888765 5565555443322
Q ss_pred -cCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe
Q 016612 231 -EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 306 (386)
Q Consensus 231 -~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 306 (386)
.+...++..++++..+++.+ .....+..++.+.+.+.+++.. ++.. ++.++++.+.+
T Consensus 274 ~~t~~~~p~~~aa~~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~i~~v~~ 334 (406)
T PRK13393 274 IFTTSLPPAVAAGALASVRHLKASSAERERHQDRVARLRARLDKAG---------IPHL----------PNPSHIVPVMV 334 (406)
T ss_pred eecCccCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHcC---------CCcC----------CCCCCeEEEEe
Confidence 23344554444444444322 2222344455556666665421 1111 23567777777
Q ss_pred CCHHhHHHHHhhcCc-ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 016612 307 GSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 381 (386)
Q Consensus 307 ~~~~~~~~l~~~l~~-~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 381 (386)
++......+.+.+.. .|+.++.+.. |.. ..+.++||++++. ++++++++.|++++
T Consensus 335 ~~~~~~~~l~~~L~~~~Gi~v~~~~~------p~~--------------p~g~~~iRis~~~~~t~edid~l~~~l~~~~ 394 (406)
T PRK13393 335 GDPVLCKQISDELLDRYGIYVQPINY------PTV--------------PRGTERLRITPSPLHTDADIEHLVQALSEIW 394 (406)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEeECC------CCC--------------CCCCceEEEEECCCCCHHHHHHHHHHHHHHH
Confidence 654456677777765 4877654321 110 1123679999963 77777777777777
Q ss_pred hcCC
Q 016612 382 RTGP 385 (386)
Q Consensus 382 ~~~~ 385 (386)
++.+
T Consensus 395 ~~~~ 398 (406)
T PRK13393 395 ARLG 398 (406)
T ss_pred HhcC
Confidence 6554
No 159
>PLN02651 cysteine desulfurase
Probab=99.94 E-value=5.3e-25 Score=205.24 Aligned_cols=293 Identities=19% Similarity=0.178 Sum_probs=192.6
Q ss_pred hHHHHHHHHHhhcCCC-c-eEEeCcHHHHHHH-HHH----hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD-R-ALCFTSGMAALAA-VTH----LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~-~i~~~~gt~al~~-~~~----~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..+++++.+++++|.+ + .++++++|++++. +.. +.++||+|++++..|+++...+..+ +..|++++.++.+
T Consensus 44 ~~~~~r~~la~~~g~~~~~v~~t~~~t~a~~~~l~~~~~~~~~~g~~vl~~~~~h~s~~~~~~~~-~~~g~~v~~v~~~~ 122 (364)
T PLN02651 44 AVEKARAQVAALIGADPKEIIFTSGATESNNLAIKGVMHFYKDKKKHVITTQTEHKCVLDSCRHL-QQEGFEVTYLPVKS 122 (364)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhccCCCCEEEEcccccHHHHHHHHHH-HhcCCEEEEEccCC
Confidence 5778899999999976 3 4555556688753 322 2478999999999998887666444 4678888888753
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|++++++.++++++++++++++|+||.+.|+++|.++|+++|+++++|++++.|..+ +..++++|++++|.+||
T Consensus 123 ~~~~d~~~l~~~i~~~t~lv~v~~~~n~tG~~~~l~~I~~~~~~~g~~~~vD~a~~~g~~~~~~~~~~~D~~~~s~hK~- 201 (364)
T PLN02651 123 DGLVDLDELAAAIRPDTALVSVMAVNNEIGVIQPVEEIGELCREKKVLFHTDAAQAVGKIPVDVDDLGVDLMSISGHKI- 201 (364)
T ss_pred CCcCCHHHHHHhcCCCcEEEEEECCCCCceecccHHHHHHHHHHcCCEEEEEcchhhCCcccCcccCCCCEEEechhhh-
Confidence 789999999999999999999999999999999999999999999999999988754 55567899999999998
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhh------cCCCCCh-hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcc
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNA------EGSGLAP-FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~------~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
+||.| .|+++++++...+ +...... ...+..+ .....+..+++.+....+...++.+.+.+++.+.
T Consensus 202 ~gp~G--~g~l~v~~~~~~~-l~p~~~g~~~~~~~~~GT~~~~~~~~l~~al~~~~~~~~~i~~~~~~l~~~l~~~---- 274 (364)
T PLN02651 202 YGPKG--VGALYVRRRPRVR-LEPLMSGGGQERGRRSGTENTPLVVGLGAACELAMKEMDYDEKHMKALRERLLNG---- 274 (364)
T ss_pred CCCCc--eEEEEEcCCCCCC-CCccccCCCccCCccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH----
Confidence 47877 7999888653321 2111110 1112222 2222223334333322334444444555444431
Q ss_pred eEecCCCCC-CCchhhhhh-cc-CCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 276 KVNYAGLPE-HPGHELHYS-QA-KGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 276 ~~~~~~l~~-~~~~~i~~~-~~-~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
+.. +++..++.+ .+ ....++++|.+++.. .+.+.+.|.. |.++.|.+++.-... +.....
T Consensus 275 ------l~~~~~~~~i~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~L~~--i~v~~g~~c~~~~~~--------~~~~~~ 337 (364)
T PLN02651 275 ------LRAKLGGVRVNGPRDPEKRYPGTLNLSFAYVE-GESLLMGLKE--VAVSSGSACTSASLE--------PSYVLR 337 (364)
T ss_pred ------HHhhCCCEEEECCCCcccCcCCEEEEEeCCCC-HHHHHHHhCC--EEEEchhhcCCCCCC--------cCHHHH
Confidence 111 223333332 11 123568998886543 5677777765 777777753211110 111233
Q ss_pred hcCCC----CCeEEEEeccCChHHHH
Q 016612 353 ARGLT----EDLVRISVGIEDVNDLI 374 (386)
Q Consensus 353 ~~~~~----~~~iRis~~~~~~~~~i 374 (386)
++|.. .+.+|+|++..++++.|
T Consensus 338 ~~g~~~~~~~~~vR~S~~~~~t~~di 363 (364)
T PLN02651 338 ALGVPEEMAHGSLRLGVGRFTTEEEV 363 (364)
T ss_pred HcCCChHHhCceEEEEcCCCCCHHHc
Confidence 34443 47899999987777655
No 160
>TIGR01821 5aminolev_synth 5-aminolevulinic acid synthase. This model represents 5-aminolevulinic acid synthase, an enzyme for one of two routes to the heme precursor 5-aminolevulinate. The protein is a pyridoxal phosphate-dependent enzyme related to 2-amino-3-ketobutyrate CoA tranferase and 8-amino-7-oxononanoate synthase. This enzyme appears restricted to the alpha Proteobacteria and mitochondrial derivatives.
Probab=99.94 E-value=9e-25 Score=206.45 Aligned_cols=326 Identities=19% Similarity=0.170 Sum_probs=207.5
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCcccc-CCC-CchHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYT-RSG-NPTRDALESLLAKLDKADRALCFTSGMAALAA-VT 87 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~-~~g-~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~ 87 (386)
..+++++ +|||+|..+.|.........-+....+..... ..| .+...++++.+++++|.++.+++++|++++.. +.
T Consensus 45 ~~~~~~~-sn~ylgl~~~p~v~~a~~~~~~~~~~~~~~s~~~~g~~~~~~~Le~~la~~~g~~~~l~~~sG~~an~~ai~ 123 (402)
T TIGR01821 45 KDVTVWC-SNDYLGMGQHPEVLQAMHETLDKYGAGAGGTRNISGTNIPHVELEAELADLHGKESALVFTSGYVANDATLA 123 (402)
T ss_pred eeEEEeE-ccCcCCCCCCHHHHHHHHHHHHHcCCCCcchhhhhCCcHHHHHHHHHHHHHhCCCeEEEECchHHHHHHHHH
Confidence 4578999 99999999988554222111100001111111 124 35789999999999998889999999988764 43
Q ss_pred HhcC--CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC----CCceEEEEeCCCCCCcccccHHHH
Q 016612 88 HLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 88 ~~~~--~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
.+.. +|+.|+.....|.+.... +...|.++..++..|.+++++.++ +++++|++++++||+|.+.|+++|
T Consensus 124 ~l~~~~~~~~v~~~~~~h~s~~~~----~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~e~~~~~~G~~~~l~~i 199 (402)
T TIGR01821 124 TLAKIIPGCVIFSDELNHASMIEG----IRHSGAEKFIFRHNDVAHLEKLLQSVDPNRPKIIAFESVYSMDGDIAPIEEI 199 (402)
T ss_pred HhhCCCCCCEEEEcchHhHHHHHH----HHHcCCeEEEECCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHH
Confidence 3433 677777766666555433 335677777777778888887775 368899999999999999999999
Q ss_pred HHHHHHcCCEEEEeCCCCCCCccCC---------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh--
Q 016612 162 AEMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-- 230 (386)
Q Consensus 162 ~~la~~~~~~li~D~a~~~~~~~~~---------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~-- 230 (386)
.++|+++|+++|+||+|+.|.+... .....|++++|+||.++++ +||++++ +++.+.+......
T Consensus 200 ~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~~----GG~i~~~-~~~~~~l~~~~~~~~ 274 (402)
T TIGR01821 200 CDLADKYGALTYLDEVHAVGLYGPRGGGIAERDGLMHRIDIIEGTLAKAFGVV----GGYIAAS-RKLIDAIRSYAPGFI 274 (402)
T ss_pred HHHHHHcCCEEEEeCcccccccCCCCCccchhccCCCCCeEEEEechhhhccC----CceeecC-HHHHHHHHHhCcCce
Confidence 9999999999999999985543210 1123589999999999643 3788776 4565555433221
Q ss_pred cCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC
Q 016612 231 EGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 307 (386)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 307 (386)
.....++..++++..+++.+ ....+...++.+.+.+.+++.. ++.+ ...++++.+.++
T Consensus 275 ~t~~~~~~~~aaa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~i~~i~~~ 335 (402)
T TIGR01821 275 FTTSLPPAIAAGATASIRHLKESQDLRRAHQENVKRLKNLLEALG---------IPVI----------PNPSHIVPVIIG 335 (402)
T ss_pred ecCcCCHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHcC---------CCcC----------CCCCCEEEEEeC
Confidence 22345555555544444322 2223334455566666665431 2111 124567777776
Q ss_pred CHHhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHh
Q 016612 308 SLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALR 382 (386)
Q Consensus 308 ~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~ 382 (386)
.......+.+.+. ..|+.+++.. +|.. ..+..++||+++ .++++++++.|+++++
T Consensus 336 ~~~~a~~~~~~L~~~~Gi~v~~~~------~p~~--------------~~g~~~lRis~~~~~t~edi~~~~~~l~~~~~ 395 (402)
T TIGR01821 336 DAALCKKVSDLLLNKHGIYVQPIN------YPTV--------------PRGTERLRITPTPAHTDKMIDDLVEALLLVWD 395 (402)
T ss_pred CHHHHHHHHHHHHhcCCEEEEeEC------CCCC--------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHHHH
Confidence 5545667777764 4477654421 1110 112357999985 3778888888888777
Q ss_pred cCC
Q 016612 383 TGP 385 (386)
Q Consensus 383 ~~~ 385 (386)
+.+
T Consensus 396 ~~~ 398 (402)
T TIGR01821 396 RLG 398 (402)
T ss_pred HcC
Confidence 654
No 161
>PRK06959 putative threonine-phosphate decarboxylase; Provisional
Probab=99.94 E-value=5.2e-25 Score=202.71 Aligned_cols=264 Identities=18% Similarity=0.164 Sum_probs=178.0
Q ss_pred HHHHHHHHhhcCCC--ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHh
Q 016612 58 DALESLLAKLDKAD--RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVAS 134 (386)
Q Consensus 58 ~~l~~~l~~~~g~~--~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 134 (386)
.++++.+++++|.. +.|++++|+ +++.++..++++|+ |++++|+|+.+. ..++..|.+++.++.++ +.
T Consensus 56 ~~L~~~ia~~~~~~~~~~I~i~~Gs~e~i~~l~~~~~~g~-v~v~~P~y~~y~----~~~~~~g~~~~~v~~~~-~~--- 126 (339)
T PRK06959 56 DGLAACAARYYGAPDAAHVLPVAGSQAAIRALPALLPRGR-VGIAPLAYSEYA----PAFARHGHRVVPLDEAA-DT--- 126 (339)
T ss_pred HHHHHHHHHHhCCCCcccEEECcCHHHHHHHHHHhcCCCe-EEEcCCCcHHHH----HHHHHCCCEEEeecccc-hh---
Confidence 78999999999884 567777776 88887767788887 888999999885 55567899999888754 22
Q ss_pred hhCCCceEEEEeCCCCCCcccccHHHHHH---HHHHcCCEEEEeCCCCCCCc-cC---CCCCCccEEEeccccccccCCC
Q 016612 135 AIGPWTKLVWVESPTNPRQQICDIRKIAE---MAHAHGALLLVDNSIMSPVL-SR---PLELGADIVMHSATKFIAGHSD 207 (386)
Q Consensus 135 ~~~~~~~~v~~~~~~nptG~~~~l~~i~~---la~~~~~~li~D~a~~~~~~-~~---~~~~~~di~~~S~sK~~~g~~g 207 (386)
+.+.++++++++||||||.+.+.+++.+ .|++++.++|+||+|..... .. .......+++.||||.+ |.+|
T Consensus 127 -~~~~~~~v~l~nPnNPTG~~~s~~~l~~l~~~~~~~~~~vI~DEay~~~~~~~s~~~~~~~~~vi~l~SfSK~~-gl~G 204 (339)
T PRK06959 127 -LPAALTHLIVVNPNNPTAERLPAARLLRWHAQLAARGGTLIVDEAFADTLPAASLAAHTDRPGLVVLRSVGKFF-GLAG 204 (339)
T ss_pred -ccccCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEECCCccCCCcccchhccCCCCEEEEecChhhc-CCcc
Confidence 3345679999999999999998655554 45678999999999874321 11 11224569999999999 5568
Q ss_pred ceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCC
Q 016612 208 VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 284 (386)
Q Consensus 208 ~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 284 (386)
+|+||++++ +++.+.+...... ...+...+.++...++.- ....+.+.++.+.+.+.|++.. +.
T Consensus 205 lRiGy~v~~-~~li~~l~~~~~~--~~vs~~~q~a~~~~L~~~~~~~~~~~~~~~~r~~l~~~L~~~g---------~~- 271 (339)
T PRK06959 205 VRAGFVLAA-PALLAALRDALGA--WTVSGPARHAVRAAFADAAWQAAMRERLAADGARLAALLRAHG---------FA- 271 (339)
T ss_pred hheEEEecC-HHHHHHHHHhcCC--CCCcHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHCC---------CC-
Confidence 999999986 5566656554432 345566666665555432 2222333444444555555431 11
Q ss_pred CCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEE
Q 016612 285 HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS 364 (386)
Q Consensus 285 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis 364 (386)
+. ..+.++++.+++ ...+.+.+..+|+.++... ..+++|||
T Consensus 272 -----~~-----~~~~f~~~~~~~---~~~l~~~l~~~GI~vr~~~--------------------------~~~~lRis 312 (339)
T PRK06959 272 -----VH-----ATPLFSWTDDPR---AAALHAALARRGIWTRYFA--------------------------PPPSVRFG 312 (339)
T ss_pred -----cc-----CcceEEEEeCCC---HHHHHHHHHhCCeEEEECC--------------------------CCCeEEEE
Confidence 11 123455666542 4567777777788765210 13469999
Q ss_pred e-c-cCChHHHHHHHHHHHhcC
Q 016612 365 V-G-IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 365 ~-~-~~~~~~~i~~l~~~l~~~ 384 (386)
+ + .++++.+++.|++.++.+
T Consensus 313 i~~~~~e~~~l~~al~~~~~~~ 334 (339)
T PRK06959 313 LPADEAEWQRLEDALAECVPTL 334 (339)
T ss_pred CCCCHHHHHHHHHHHHHHHHHH
Confidence 9 4 478899999998877654
No 162
>PLN02955 8-amino-7-oxononanoate synthase
Probab=99.94 E-value=2.2e-24 Score=200.97 Aligned_cols=322 Identities=18% Similarity=0.165 Sum_probs=215.2
Q ss_pred CCccceeeccCCCCCCCCCcccceeeeeeeecCCCCCCC-CccccCC--CCc-hHHHHHHHHHhhcCCCceEEeCcHHHH
Q 016612 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG-PYDYTRS--GNP-TRDALESLLAKLDKADRALCFTSGMAA 82 (386)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~y~~~--g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~a 82 (386)
.+....+++|+ +|||+|....|.+....... +...+ ...-++. |+. ..+++|+.+++++|.++++++++|..|
T Consensus 98 ~~~~r~~l~Fs-SndYLGL~~~p~v~~a~~~a--i~~yG~g~~gSrl~~G~~~~h~~LE~~LA~f~g~e~all~sSGy~A 174 (476)
T PLN02955 98 KGRFKKLLLFS-GNDYLGLSSHPTISNAAANA--AKEYGMGPKGSALICGYTTYHRLLESSLADLKKKEDCLVCPTGFAA 174 (476)
T ss_pred cCCCceEEEee-ccCccCCCCCHHHHHHHHHH--HHHcCCCCCCcCccccChHHHHHHHHHHHHHHCCCcEEEECChHHH
Confidence 34456889999 99999999988665322111 11111 1122232 553 788999999999999999999999866
Q ss_pred H-HHHHHh--------------cCCCCEEEecCCCCCcHHHHHhhhcccC-CcEEEEeCCCCHHHHHhhhC---CCceEE
Q 016612 83 L-AAVTHL--------------LGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIG---PWTKLV 143 (386)
Q Consensus 83 l-~~~~~~--------------~~~g~~Vlv~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~d~~~l~~~~~---~~~~~v 143 (386)
. .++.++ ..++|.|++....|.+.....+ ..+.. +.++..++..|+++|++.++ .+.++|
T Consensus 175 N~~~i~aL~~~~~~~~~~~~~~~~~~d~i~~D~~~HaSI~dG~~-ls~~~~~a~~~~f~HND~~~Le~~L~~~~~~~~~V 253 (476)
T PLN02955 175 NMAAMVAIGSVASLLAASGKPLKNEKVAIFSDALNHASIIDGVR-LAERQGNVEVFVYRHCDMYHLNSLLSSCKMKRKVV 253 (476)
T ss_pred HHHHHHHHhhccccccccccccCCCCcEEEEeccchHHHHHHHH-hccccCCceEEEeCCCCHHHHHHHHHhCCCCceEE
Confidence 4 344333 2456677888788887765442 23223 57888889999999998875 356788
Q ss_pred EEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC---------CCCCCccEEEeccccccccCCCceEEEEE
Q 016612 144 WVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLA 214 (386)
Q Consensus 144 ~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~G~i~ 214 (386)
+++...++.|.+.|+++|.++|++||+++|+||+|+.+.+.. ....+.|++++|++|.++. ++|+++
T Consensus 254 v~EgV~SmdGdiapL~eL~~L~~~~ga~LiVDEAH~~Gv~G~~G~G~~e~~g~~~di~ii~~TLsKA~G~----~GGfi~ 329 (476)
T PLN02955 254 VTDSLFSMDGDFAPMEELSQLRKKYGFLLVIDDAHGTFVCGENGGGVAEEFNCEADVDLCVGTLSKAAGC----HGGFIA 329 (476)
T ss_pred EEeCCCCCCCCcCCHHHHHHHHHHcCcEEEEcccccCceecCCCCcHHHHhCCCCCCcEEEEeCccchhc----cCceee
Confidence 889999999999999999999999999999999998765532 1123578999999999853 368988
Q ss_pred EcChhHHHHHHHhhh--hcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchh
Q 016612 215 VKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 289 (386)
Q Consensus 215 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 289 (386)
+++ .+.+.+..... .+++.+++....+.+.+++.+ ..+.++++++.+.+.+. . ++.
T Consensus 330 gs~-~~~~~l~~~~~~~ifStalpp~~aaa~laal~l~~~~~~~r~~L~~n~~~fr~~----~--------G~~------ 390 (476)
T PLN02955 330 CSK-KWKQLIQSRGRSFIFSTAIPVPMAAAAYAAVVVARKEKWRRKAIWERVKEFKAL----S--------GVD------ 390 (476)
T ss_pred cHH-HHHHHHHHhCCCCeecccccHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHh----c--------CCC------
Confidence 874 46565554332 233455555555554444322 23334444444443331 0 221
Q ss_pred hhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCC
Q 016612 290 LHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED 369 (386)
Q Consensus 290 i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~ 369 (386)
..++++.+.+.++.....+.+.|...|+.+.. +.+|.. +.+...+||+++..+
T Consensus 391 -------~~sPI~pI~ig~~~~a~~~~~~L~~~Gi~v~~------i~yPtV--------------P~g~~rLRi~lsA~H 443 (476)
T PLN02955 391 -------ISSPIISLVVGNQEKALKASRYLLKSGFHVMA------IRPPTV--------------PPNSCRLRVTLSAAH 443 (476)
T ss_pred -------CCCCEEEEEeCCHHHHHHHHHHHHHCCCEEEE------ECCCCC--------------CCCCceEEEeeCCCC
Confidence 13688999999888888999999888886554 334422 113456999998655
Q ss_pred hHHHHHHHHHHHh
Q 016612 370 VNDLISDLDKALR 382 (386)
Q Consensus 370 ~~~~i~~l~~~l~ 382 (386)
.++.|+.+.++|.
T Consensus 444 t~edId~lv~~L~ 456 (476)
T PLN02955 444 TTEDVKKLITALS 456 (476)
T ss_pred CHHHHHHHHHHHH
Confidence 5555555554443
No 163
>TIGR03576 pyridox_MJ0158 pyridoxal phosphate enzyme, MJ0158 family. Members of this archaeal protein family are pyridoxal phosphate enzymes of unknown function. Sequence similarity to SelA, a bacterial enzyme of selenocysteine biosynthesis, has led to some members being misannotated as functionally equivalent, but selenocysteine is made on tRNA in Archaea by a two-step process that does not involve a SelA homolog.
Probab=99.94 E-value=1.2e-24 Score=199.77 Aligned_cols=298 Identities=15% Similarity=0.176 Sum_probs=190.7
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCC-chHHHHHHHHHhhcCC--CceEEeCcHHHHHH-HHHHhcCCCCE
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGN-PTRDALESLLAKLDKA--DRALCFTSGMAALA-AVTHLLGTGEE 95 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~-~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~-~~~~~~~~g~~ 95 (386)
|||+|....|.+...... ....|+ |. ++.+++++.+++++|. +++++++||++++. ++.+++++||+
T Consensus 27 ~~ylgl~~~~~~~~~~~~-------~~~~~~--g~~~~~~~Le~~lA~~~g~~~e~ilv~~gg~~a~~~~~~al~~~gd~ 97 (346)
T TIGR03576 27 YDLTGLAGGFKIDEEDLE-------LLETYV--GPAIFEEKVQELGREHLGGPEEKILVFNRTSSAILATILALEPPGRK 97 (346)
T ss_pred cccccCCCChhHHHHHHH-------HHHHhc--CCHHHHHHHHHHHHHHcCCCcceEEEECCHHHHHHHHHHHhCCCCCE
Confidence 889998887765422111 111121 44 5899999999999998 67888888899986 56678899999
Q ss_pred EEec---CCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc---ccHHHHHHHHHHcC
Q 016612 96 IVAG---DDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI---CDIRKIAEMAHAHG 169 (386)
Q Consensus 96 Vlv~---~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~---~~l~~i~~la~~~~ 169 (386)
|+++ .|.|.++. ..++..|.++.. ..++++++. .+++++|+++. ++|+|.+ .++++|+++|+++|
T Consensus 98 Vli~~~d~p~~~s~~----~~~~l~ga~~~~--~~~l~~l~~--~~~~~lIiitg-~s~~G~v~~~~~L~~i~~la~~~~ 168 (346)
T TIGR03576 98 VVHYLPEKPAHPSIP----RSCKLAGAEYFE--SDELSELKK--IDGTSLVVITG-STMDLKVVSEEDLKRVIKQAKSKE 168 (346)
T ss_pred EEECCCCCCCchhHH----HHHHHcCCEEec--cCCHHHHhh--CcCceEEEEEC-CCCCCcccCHHHHHHHHHHHHHcC
Confidence 9975 35776664 445566776533 346666543 35688888865 5889998 47999999999999
Q ss_pred CEEEEeCCCCCCCcc---C--CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 170 ALLLVDNSIMSPVLS---R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 170 ~~li~D~a~~~~~~~---~--~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
+++++||+|+.+... . ....+.|+++.|+||++. |+|+||+++++ ++.+.+...........+++.++++.
T Consensus 169 ~~livDEAy~~~~~~~~~~~~~~~~~~divv~s~SKala---G~r~G~v~~~~-~li~~l~~~~~~~~~s~~~~~~~aa~ 244 (346)
T TIGR03576 169 AIVLVDDASGARVRRLYGQPPALDLGADLVVTSTDKLMD---GPRGGLLAGRK-ELVDKIKSVGEQFGLEAQAPLLAAVV 244 (346)
T ss_pred CEEEEECCccccccccCCCCCHHHcCCcEEEeccchhcc---ccceEEEEeCH-HHHHHHHHhhcCcccCccHHHHHHHH
Confidence 999999999876421 1 122357899999999664 45799999874 56666665554433335666666666
Q ss_pred hcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc
Q 016612 245 RGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 322 (386)
Q Consensus 245 ~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 322 (386)
.+++... .....+.++...+.+.++. +. ++ ...++++++.++.....+...+.+...
T Consensus 245 ~aL~~~~~~~~~~~l~~r~~~~~~~l~~-----------~~------~~----~~~~~f~~~~~~~~~~~~~~~~ll~~~ 303 (346)
T TIGR03576 245 RALEEFELSRIRDAFKRKEEVYLRLFDK-----------LN------VE----RTPTGFVIKGVEEEKLIEIGLDLLRNY 303 (346)
T ss_pred HHHhhccHHHHHHHHHHHHHHHHHHHHh-----------CC------CC----cCCCeEEEEeCCCCCHHHHHHHHHHhC
Confidence 6654321 1122222222222222221 11 11 113456777775321223444555556
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCC-----hHHHHHHHHHHHh
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIED-----VNDLISDLDKALR 382 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~-----~~~~i~~l~~~l~ 382 (386)
|+.+.+|..+. ..++++|||++..+ ++.+++.|++.|+
T Consensus 304 gV~v~~~~~f~----------------------~~~~~vRis~~~~~~~~~~~~~~~~al~~~~~ 346 (346)
T TIGR03576 304 GIITITAVGMP----------------------GASKTLRFDLAAKDAERIGDDYLVEAVKDSLK 346 (346)
T ss_pred CEEEeCCcccC----------------------CCCCeEEEEEecChHHhcCHHHHHHHHHhccC
Confidence 77776654321 02578999998644 8999999888764
No 164
>TIGR01825 gly_Cac_T_rel pyridoxal phosphate-dependent acyltransferase, putative. This model represents an enzyme subfamily related to three known enzymes; it appears closest to glycine C-acteyltransferase, shows no overlap with it in species distribution, and may share that function. The three closely related enzymes are glycine C-acetyltransferase (2-amino-3-ketobutyrate coenzyme A ligase), 5-aminolevulinic acid synthase, and 8-amino-7-oxononanoate synthase. All transfer the R-group (acetyl, succinyl, or 6-carboxyhexanoyl) from coenzyme A to an amino acid (Gly, Gly, Ala, respectively), with release of CO2 for the latter two reactions.
Probab=99.94 E-value=1.4e-24 Score=204.31 Aligned_cols=326 Identities=18% Similarity=0.147 Sum_probs=205.5
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~ 87 (386)
...++++ .+++.|..++|..........+........|... |.+ +++++++++++++|.++.+++++|++++. ++.
T Consensus 33 ~~~id~~-~~~~~g~~~~~~~~~a~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~~g~~~~i~~~sG~~a~~~a~~ 111 (385)
T TIGR01825 33 KEVINLS-SNNYLGFADHPRLKEAAAQAIQQYGVGAGAVRTIAGTLRLHEELEEKLAKFKKTEAALVFQSGFNTNQGVLS 111 (385)
T ss_pred ceEEEee-ccCccCCCCCHHHHHHHHHHHHHcCCCCCccCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHHH
Confidence 3456676 4455666455544321111110001122345555 665 89999999999999888899999997754 666
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC----CCceEEEEeCCCCCCcccccHHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAE 163 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~~i~~ 163 (386)
.++++||.|++++|.|+++... +...|.++..++..|++++++.+. +++++|++++++|++|.+.|+++|.+
T Consensus 112 ~~~~~gd~vi~~~~~~~~~~~~----~~~~g~~~~~~~~~d~~~l~~~l~~~~~~~~~~v~~~~v~~~tG~~~~~~~i~~ 187 (385)
T TIGR01825 112 ALLRKGDIVLSDELNHASIIDG----LRLTKATKKIYKHADMDDLDRVLRENPSYGKKLIVTDGVFSMDGDVAPLPEIVE 187 (385)
T ss_pred HhCCCCCEEEEEccccHHHHHH----HHhcCCceEEeCCCCHHHHHHHHHhhccCCCeEEEEecCCcCCCCccCHHHHHH
Confidence 6899999999999999887533 334677777777778888887665 36889999999999999999999999
Q ss_pred HHHHcCCEEEEeCCCCCCCccC---------CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh--hcC
Q 016612 164 MAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEG 232 (386)
Q Consensus 164 la~~~~~~li~D~a~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~--~~~ 232 (386)
+|++||+++|+||+|+.+.+.. ....+.|+++.|+||++++ . +||++++ +++.+.+..... ..+
T Consensus 188 l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~~-~---gG~~~~~-~~~~~~~~~~~~~~~~~ 262 (385)
T TIGR01825 188 LAERYGAVTYVDDAHGSGVMGEAGRGTVHHFGLEDKVDIQVGTLSKAIGV-V---GGYAAGH-KELIEYLKNRARPFLFS 262 (385)
T ss_pred HHHHhCCEEEEECcccccCcCCCCCccHhhcCCCcCCcEEEEeccHHhhc-C---CCEEecC-HHHHHHHHHhCcccccc
Confidence 9999999999999997654321 1224678999999999954 2 4888775 445554443321 122
Q ss_pred CCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH
Q 016612 233 SGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 309 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (386)
...++...+++..+++.+ ....++..++.+.+.+.+++. +++ ++ ...++++.+.++..
T Consensus 263 ~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~---------g~~------~~----~~~~~~~~~~~~~~ 323 (385)
T TIGR01825 263 TAQPPAVVAALAAAVDELQRSPELMERLWDNTRFFKAGLGKL---------GYD------TG----GSETPITPVVIGDE 323 (385)
T ss_pred CCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc---------CCC------CC----CCCCCEEEEEECCH
Confidence 223334333333333221 122333444445555555432 111 11 11235666666544
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcCC
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~~ 385 (386)
.....+.+.+...|+.++.+.. |.. ..+..+||++++ .++++++++.+++++++.+
T Consensus 324 ~~~~~~~~~L~~~gi~v~~~~~------~~~--------------~~~~~~iRi~~~~~~~~e~i~~~~~~l~~~~~~~~ 383 (385)
T TIGR01825 324 KAAQEFSRRLFDEGIFAQSIVF------PTV--------------PRGTARIRNIPTAEHTKDDLDQALDAYEKVGKELG 383 (385)
T ss_pred HHHHHHHHHHHHCCcEEcccCC------CCC--------------CCCCceEEEEEcCCCCHHHHHHHHHHHHHHHHHhC
Confidence 3456677776666776542221 100 112467999874 4888888888888887654
No 165
>PRK09440 avtA valine--pyruvate transaminase; Provisional
Probab=99.94 E-value=1.2e-24 Score=206.50 Aligned_cols=306 Identities=17% Similarity=0.168 Sum_probs=191.1
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHHHH-HhcC-----CCCEEEe-cCCCCCcHHHHHh-
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGM-AALAAVT-HLLG-----TGEEIVA-GDDLYGGTDRLLS- 111 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~~~-~~~~-----~g~~Vlv-~~~~~~~~~~~~~- 111 (386)
...|.+. |.+ +|+++.+++.+.+|.+ +.|++++|+ +++.++. .+++ +||.|++ .+|+|+.+.....
T Consensus 67 ~~~Y~~~~G~~~LR~aia~~~~~~~g~~v~~~~I~it~Ga~~al~~~~~~l~~~~~~~~gd~v~i~~~P~y~~y~~~~~~ 146 (416)
T PRK09440 67 LGNYDGPQGKDELIEALAALLNERYGWNISPQNIALTNGSQSAFFYLFNLFAGRRADGSLKKILFPLAPEYIGYADAGLE 146 (416)
T ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEccChHHHHHHHHHHHhccccCCCCCeEEEecCCCchhhHHHhhc
Confidence 3568877 876 8999999998876643 456677666 8887554 4554 6899999 7999998864321
Q ss_pred -hhcccCCcEEEEeCC------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 112 -RVTPKTGVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 112 -~~~~~~g~~~~~v~~------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
......+..+..++. .|+++++ +.++++++++++|+||||.+++ +++|+++|+++|++||+||+|+..
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~i~l~~P~NPTG~~~s~~~~~~l~~~a~~~~~~iI~De~Y~~~ 224 (416)
T PRK09440 147 EDLFVSYRPNIELLPEGQFKYHVDFEHLH--IDEDTGAICVSRPTNPTGNVLTDEELEKLDALARQHNIPLLIDNAYGPP 224 (416)
T ss_pred cCceeecccccccccccccccCCCHHHcc--cCCCceEEEEecCCCCCCccCCHHHHHHHHHHHHHcCCcEEEeCCcccc
Confidence 111222223322222 2677776 3568899999999999999986 778999999999999999999632
Q ss_pred Cc----cC--CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH--H-
Q 016612 182 VL----SR--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--L- 252 (386)
Q Consensus 182 ~~----~~--~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~- 252 (386)
.. .+ +...+..|+++|+||+ +.+|+|+||++++ +.+.+.+...........+...+.++...+..-. .
T Consensus 225 ~~~~~~~~~~~~~~~~vI~~~SfSK~--~~pGlRiG~~i~~-~~l~~~~~~~~~~~~~~~s~~~q~~~~~~l~~~~~~~~ 301 (416)
T PRK09440 225 FPGIIFSEATPLWNPNIILCMSLSKL--GLPGVRCGIVIAD-EEIIEALSNMNGIISLAPGRLGPAIAAEMIESGDLLRL 301 (416)
T ss_pred CCCcchhhcCccccCCeEEEeccccc--CCCcceEEEEeCC-HHHHHHHHHHHHHhccCCCcHHHHHHHHHhccchHHHH
Confidence 11 11 1113567999999995 5678999999986 4566656555544444556666666555543211 1
Q ss_pred ----HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccC
Q 016612 253 ----RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVS 327 (386)
Q Consensus 253 ----~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~ 327 (386)
....+.++.+.+.+.+.+.. +.+ +..+ .. +..|.++|+.++. ......+.+.+...|+.+.
T Consensus 302 ~~~~~~~~~~~r~~~~~~~L~~~l----------~~~-~~~~--~~-p~gg~fiw~~~~~~~~~~~~~~~~l~~~gV~v~ 367 (416)
T PRK09440 302 SETVIRPFYRQKVQLAIALLRRYL----------PDE-PCLI--HK-PEGAIFLWLWFKDLPITTEELYQRLKARGVLVV 367 (416)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----------ccC-CeEE--ec-CCCceEEEEECCCCCCCHHHHHHHHHHCCEEEe
Confidence 12223344444555554321 110 0000 01 1135677777754 2234667777777788888
Q ss_pred CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHhcC
Q 016612 328 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~~~ 384 (386)
+|..+. +.. .... ....+++|||++ .+++++.++.|.++++++
T Consensus 368 pg~~F~----~~~--~~~~--------~~~~~~iRis~~~~~~~l~~~i~~l~~~~~~~ 412 (416)
T PRK09440 368 PGHYFF----PGL--DEDW--------PHAHQCIRMNYVQDDEEIEKGIAILAEEVEKA 412 (416)
T ss_pred chHhhC----CCC--cccc--------CCcCceEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 876531 100 0000 001368999996 477888888888887653
No 166
>PF00155 Aminotran_1_2: Aminotransferase class I and II 1-aminocyclopropane-1-carboxylate synthase signature aspartate aminotransferase signature; InterPro: IPR004839 Aminotransferases share certain mechanistic features with other pyridoxal-phosphate dependent enzymes, such as the covalent binding of the pyridoxal-phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into class I and class II. This entry includes proteins from both subfamilies.; GO: 0016769 transferase activity, transferring nitrogenous groups, 0030170 pyridoxal phosphate binding, 0009058 biosynthetic process; PDB: 3NRA_B 3P6K_B 3OP7_A 3ASB_A 3ASA_A 1W7M_A 3FVX_A 1W7N_A 3FVU_B 3FVS_A ....
Probab=99.94 E-value=2.5e-26 Score=214.61 Aligned_cols=282 Identities=21% Similarity=0.269 Sum_probs=183.9
Q ss_pred CCCccccCC-CCc-hHHHHHHHHHhhcC----CCceEEeCcHH-HHHHHHHH-h-cCCCCEEEecCCCCCcHHHHHhhhc
Q 016612 44 NGPYDYTRS-GNP-TRDALESLLAKLDK----ADRALCFTSGM-AALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 44 ~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~~~~gt-~al~~~~~-~-~~~g~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
...+.|.+. |.+ +++++.+++.+..| .+..+++++|+ +++.++.. + .++||.|++++|+|+.+. ..+
T Consensus 35 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~i~~~~G~~~~~~~~~~~~~~~~~~~vlv~~P~y~~~~----~~~ 110 (363)
T PF00155_consen 35 SSFLGYPPPQGYPELREAIADFLGRRYGVPVDPEANILVTSGAQAALFLLLRLLKINPGDTVLVPDPCYPSYI----EAA 110 (363)
T ss_dssp TGCTSSTCTTHHHHHHHHHHHHHHHHHTHHTTGGEGEEEESHHHHHHHHHHHHHHSSTTSEEEEEESSSTHHH----HHH
T ss_pred cccccCCCchhhHHHHHHHHHHhhhccCcccccceEEEEecccccchhhhhhcccccccccceecCCcccccc----ccc
Confidence 445667766 554 55555555553332 23378888888 66666555 4 569999999999999996 556
Q ss_pred ccCCcEEEEeCC-------CCHHHHHhhhCC------CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCC
Q 016612 115 PKTGVVVKRVNT-------CDLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 115 ~~~g~~~~~v~~-------~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~ 178 (386)
+..|.+++.++. .|++++++.+++ +++++++++|+||||.+++ +++|+++|+++|+++|+||+|
T Consensus 111 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~ii~De~y 190 (363)
T PF00155_consen 111 RLLGAEVIPVPLDSENDFHLDPEALEEALDELPSKGPRPKAVLICNPNNPTGSVLSLEELRELAELAREYNIIIIVDEAY 190 (363)
T ss_dssp HHTTSEEEEEEEEETTTTEETHHHHHHHHHTSHTTTETEEEEEEESSBTTTTBB--HHHHHHHHHHHHHTTSEEEEEETT
T ss_pred cccCceeeeccccccccccccccccccccccccccccccceeeecccccccccccccccccchhhhhcccccceeeeece
Confidence 678899888883 389999998876 6789999999999999986 556666699999999999999
Q ss_pred CCCCccCC--------CCCC-ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC-
Q 016612 179 MSPVLSRP--------LELG-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK- 248 (386)
Q Consensus 179 ~~~~~~~~--------~~~~-~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (386)
+....... ...+ ..+++.|+||.+ |.+|+|+||++++ +.+.+.+......... +...+.++...+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~vi~~~S~SK~~-g~~GlRvG~i~~~-~~~~~~l~~~~~~~~~--~~~~~~~~~~~l~~ 266 (363)
T PF00155_consen 191 SDLIFGDPDFGPIRSLLDEDDNVIVVGSLSKSF-GLPGLRVGYIVAP-PELIERLRRFQRSGLS--SSPMQAAAAAALSD 266 (363)
T ss_dssp TTGBSSSSHTHHHHGHHTTTSTEEEEEESTTTT-TSGGGTEEEEEEE-HHHHHHHHHHHHHTTS--SHHHHHHHHHHHHH
T ss_pred eccccCCCccCcccccccccccceeeeeccccc-cccccccccccch-hhhhhhhhhccccccc--cchhhHHHHHhhhc
Confidence 86544321 1122 369999999999 5678999999995 6677767666654433 4444444333222
Q ss_pred ------cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-eCCHHhHHHHHhhcCc
Q 016612 249 ------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGSLALSKHVVETTKY 321 (386)
Q Consensus 249 ------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~~ 321 (386)
.+......+.++.+.+.+.+++.. ..++ ...++++.|. ++.. ....+.+.+..
T Consensus 267 ~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~---------------~~~~----~~~~~~~~~~~~~~~-~~~~l~~~L~~ 326 (363)
T PF00155_consen 267 PELVEKWLEELRERLRENRDLLREALEEIG---------------ITVL----PPEAGFFLWVRLDPN-DAEELAQELLE 326 (363)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------------SEEE----HHSBSSEEEEEESHH-HHHHHHHHHHH
T ss_pred ccccccccccchhhHHHHHHHHHHHHHHhh---------------hhee----eccCccEEEEEcccc-hHHHHHHHHHH
Confidence 223344445555555556655431 1111 1124555554 4433 45666666666
Q ss_pred c-eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHH
Q 016612 322 F-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISD 376 (386)
Q Consensus 322 ~-gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~ 376 (386)
. |+.+.+|..+ +. +++||++++. +++++++++
T Consensus 327 ~~gi~v~pg~~~----------------------~~-~~~iRi~~a~~~~e~~~~~~~~ 362 (363)
T PF00155_consen 327 EYGILVRPGSYF----------------------GV-PGYIRISLASHSEEDLEEALER 362 (363)
T ss_dssp HHTEEEEEGGGG----------------------TS-TTEEEEEGGCSCHHHHHHHHHH
T ss_pred hCCEEEEecCCC----------------------CC-CCEEEEEeccCCHHHHHHHHhh
Confidence 5 7777666542 22 6679999943 444444443
No 167
>PLN02368 alanine transaminase
Probab=99.94 E-value=2.5e-25 Score=208.39 Aligned_cols=199 Identities=15% Similarity=0.191 Sum_probs=146.5
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHH-HHHhc-CCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGM-AALAA-VTHLL-GTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~-~~~~~-~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
....|++. |.+ +|+++.+++.+.+|.+ +.|++++|+ +++.. +.+++ ++||.|++++|+|+.+. ..++.
T Consensus 99 ~~~~Y~~~~G~~~LR~aia~~~~~~~g~~~~~~~I~it~Ga~~al~~~~~~l~~~pGd~Vli~~P~Y~~y~----~~~~~ 174 (407)
T PLN02368 99 GLGAYSDSRGLPGVRKEVAEFIERRDGYPSDPELIFLTDGASKGVMQILNAVIRGEKDGVLVPVPQYPLYS----ATISL 174 (407)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcccHHHHHHHHHHHHcCCCCCEEEEeCCCCccHH----HHHHH
Confidence 45678887 875 8999999998876642 456566665 88874 45566 79999999999999996 55567
Q ss_pred CCcEEEEeCCC-------CHHHHHhhhCC------CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 117 TGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 117 ~g~~~~~v~~~-------d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
.|.+++.++.+ |++++++.+++ +++++++++|+||||.+++ +++|.++|++||++||+||+|..
T Consensus 175 ~g~~~v~v~~~~~~~~~~d~~~le~~i~~~~~~~~~~k~l~l~nP~NPTG~v~s~e~l~~l~~~a~~~~~~II~DE~Y~~ 254 (407)
T PLN02368 175 LGGTLVPYYLEESENWGLDVNNLRQSVAQARSKGITVRAMVIINPGNPTGQCLSEANLREILKFCYQERLVLLGDEVYQQ 254 (407)
T ss_pred cCCEEEEEecccccCCCCCHHHHHHHHHHHhhcCCCeEEEEEECCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccccc
Confidence 88888888652 78899988863 7899999999999999986 77889999999999999999864
Q ss_pred CCcc------CC------C-----CCCccEEEeccccccccCCCceEEEEEE--cChhHHHHHHHhhhhcCCCCChhhHH
Q 016612 181 PVLS------RP------L-----ELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFDCW 241 (386)
Q Consensus 181 ~~~~------~~------~-----~~~~di~~~S~sK~~~g~~g~~~G~i~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (386)
-.+. +. . ..+..+++.|+||.+.+.+|+|+||+++ .++++.+.+...... ....+.+.+.
T Consensus 255 l~y~~~~~~~s~~~~~~~~~~~~~~~~~vI~~~SfSK~~~~~~GlRiGy~i~~~~~~~li~~~~~~~~~-~~~~~~~~Q~ 333 (407)
T PLN02368 255 NIYQDERPFISAKKVLMDMGPPISKEVQLVSFHTVSKGYWGECGQRGGYFEMTNIPPKTVEEIYKVASI-ALSPNVSGQI 333 (407)
T ss_pred cccCCCCCcccHHHHHhhhcccccccceEEEEecCCcccccCCccceEEEEEeCCCHHHHHHHHHHhcc-cCCCCcHHHH
Confidence 3221 10 0 1235799999999986667899999995 245565555554322 2345555565
Q ss_pred HHHhcCC
Q 016612 242 ICLRGVK 248 (386)
Q Consensus 242 ~~~~~~~ 248 (386)
++...+.
T Consensus 334 aa~~~l~ 340 (407)
T PLN02368 334 FMGLMVN 340 (407)
T ss_pred HHHHHhC
Confidence 5555443
No 168
>PRK04635 histidinol-phosphate aminotransferase; Provisional
Probab=99.94 E-value=1.8e-25 Score=207.47 Aligned_cols=270 Identities=16% Similarity=0.162 Sum_probs=174.9
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
...++++.+++++|.+ +.|++++|+ +++..+ .+++++| |+|++++|.|+.+. ..++..|++++.++.+
T Consensus 61 ~~~~Lr~aia~~~~~~~~~I~it~Gs~~~i~~~~~~~~~~g~d~vlv~~P~y~~y~----~~~~~~g~~v~~v~~~~~~~ 136 (354)
T PRK04635 61 QPPELINAYSAYAGVAPEQILTSRGADEAIELLIRAFCEPGQDSIACFGPTYGMYA----ISAETFNVGVKALPLTADYQ 136 (354)
T ss_pred CHHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHHHHhcCCCCCeEEEcCCChHHHH----HHHHHcCCEEEEEecCCCCC
Confidence 3567788888888876 566666665 888755 4577888 89999999998774 4567789999998864
Q ss_pred -CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc-CCEEEEeCCCCCCCcc-C---C-CCCCccEEEecccc
Q 016612 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLS-R---P-LELGADIVMHSATK 200 (386)
Q Consensus 128 -d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~-~~~li~D~a~~~~~~~-~---~-~~~~~di~~~S~sK 200 (386)
|++.++. + +++++|++++|+||||.+.+.+++.++++.. +++||+||+|...... . . ......+++.|+||
T Consensus 137 ~~~~~l~~-~-~~~~li~i~nP~NPTG~~~~~~~l~~l~~~~~~~~vivDeay~~~~~~~s~~~~~~~~~~~iv~~S~SK 214 (354)
T PRK04635 137 LPLDYIEQ-L-DGAKLVFICNPNNPTGTVIDRADIEQLIEMTPDAIVVVDEAYIEFCPEYSVADLLASYPNLVVLRTLSK 214 (354)
T ss_pred CCHHHHHh-c-cCCCEEEEeCCCCCCCccCCHHHHHHHHHhCCCcEEEEeCchHhhccCcchHHHHhhCCCEEEEechHH
Confidence 5666663 3 6899999999999999999999999988764 7999999998632211 1 0 11245689999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHhhCCCcc
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
++ |.+|+|+||++++ +++.+.+..... ....+...+.++...+.. +....+.+.++.+.+.+.|++.+
T Consensus 215 ~~-~l~GlRlG~~i~~-~~~~~~l~~~~~--~~~~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~r~~l~~~L~~~~--- 287 (354)
T PRK04635 215 AF-ALAGARCGFTLAN-EELIEILMRVIA--PYPVPLPVSEIATQALSEAGLARMKFQVLDLNAQGARLQAALSMYG--- 287 (354)
T ss_pred Hh-hhhHHHHhhhhCC-HHHHHHHHhhcC--CCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHhCC---
Confidence 99 6678999999987 445554443322 223343333333333321 12222233334444445544332
Q ss_pred eEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 276 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 276 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
+..++ +..+.++++.+++ ...+.+.+...|+.++.+.. .
T Consensus 288 -----------~~~~~----~~~g~f~~~~~~~---~~~~~~~l~~~gv~v~~~~~-----------------------~ 326 (354)
T PRK04635 288 -----------GAKVL----EGNGNYVLAKFDD---VDAVFKALWDAGIVARAYKD-----------------------P 326 (354)
T ss_pred -----------CceEC----CCCCcEEEEECCC---HHHHHHHHHHCCEEEEECCC-----------------------C
Confidence 11111 1235677777754 33455556666776653221 0
Q ss_pred CCCCeEEEEecc-CChHHHHHHHHH
Q 016612 356 LTEDLVRISVGI-EDVNDLISDLDK 379 (386)
Q Consensus 356 ~~~~~iRis~~~-~~~~~~i~~l~~ 379 (386)
..++++|||++. ++++.+++.|++
T Consensus 327 ~~~~~lRis~~~~e~~~~l~~al~~ 351 (354)
T PRK04635 327 RLANCIRFSFSNRAETDKLIGLIRN 351 (354)
T ss_pred CCCCeEEEEeCCHHHHHHHHHHHHH
Confidence 025679999974 677777766654
No 169
>PRK05958 8-amino-7-oxononanoate synthase; Reviewed
Probab=99.94 E-value=4.4e-24 Score=201.06 Aligned_cols=323 Identities=21% Similarity=0.194 Sum_probs=205.1
Q ss_pred ceeeccCCCCCCCCCcc-cceeeeeeeecCCCCCCCCccccCC-CC-chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HH
Q 016612 11 TLLMNFSNEFDPYGALS-TPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~ 86 (386)
...++++ .++++|..+ |.+.++........ ......|... |. +.++++++.++++++.++.+++++|++++. ++
T Consensus 39 ~~~id~~-~~~~~g~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~g~~~~~~~l~~~la~~~~~~~~i~~~~g~~~~~~~l 116 (385)
T PRK05958 39 RRMLNFA-SNDYLGLARHPRLIAAAQQAARRY-GAGSGGSRLVTGNSPAHEALEEELAEWFGAERALLFSSGYAANLAVL 116 (385)
T ss_pred ceEEEee-CCCcccCCCCHHHHHHHHHHHHhc-CCCCCCcCcccCCcHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHHH
Confidence 4567777 455667533 43444221111100 0111122222 43 478999999999999888899999986654 55
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC---CceEEEEeCCCCCCcccccHHHHHH
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAE 163 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~ 163 (386)
..++++||.|+++++.|+++.. .++..|.+++.++..|++++++.+++ ++.++++++++|++|...++++|.+
T Consensus 117 ~~~~~~gd~V~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~~~lvi~~~~~~~~G~~~~l~~i~~ 192 (385)
T PRK05958 117 TALAGKGDLIVSDKLNHASLID----GARLSRARVRRYPHNDVDALEALLAKWRAGRALIVTESVFSMDGDLAPLAELVA 192 (385)
T ss_pred HHhCCCCCEEEEeCccCHHHHH----HHHhcCCceEEeCCCCHHHHHHHHHhccCCCeEEEEEecccCCCCcCCHHHHHH
Confidence 6678999999999999988763 34567888888888899999998864 3677777889999999999999999
Q ss_pred HHHHcCCEEEEeCCCCCCCccC---------CC-CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh--hhc
Q 016612 164 MAHAHGALLLVDNSIMSPVLSR---------PL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAE 231 (386)
Q Consensus 164 la~~~~~~li~D~a~~~~~~~~---------~~-~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~--~~~ 231 (386)
+|+++|+++|+||+|+.+.+.. .. ....++++.|+||+++ +. +|+++.+ +.+.+.+.... ...
T Consensus 193 ia~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~~~i~~~s~sK~~~-~~---Gg~~~~~-~~~~~~~~~~~~~~~~ 267 (385)
T PRK05958 193 LARRHGAWLLVDEAHGTGVLGPQGRGLAAEAGLAGEPDVILVGTLGKALG-SS---GAAVLGS-ETLIDYLINRARPFIF 267 (385)
T ss_pred HHHHhCCEEEEECcccccccCCCCCchHHhhCCCCCCceEEEEechhhcc-cC---CcEEEcC-HHHHHHHHHhCcccee
Confidence 9999999999999997554320 11 1234688999999994 44 3788776 45555443221 112
Q ss_pred CCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC
Q 016612 232 GSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 308 (386)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (386)
+.+.++.+..++..+++.+ ....+...++.+.+.+.+++.. ++ +. +..++++++.+++
T Consensus 268 ~~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~~---------~~------~~----~~~~~~~~~~~~~ 328 (385)
T PRK05958 268 TTALPPAQAAAARAALRILRREPERRERLAALIARLRAGLRALG---------FQ------LM----DSQSAIQPLIVGD 328 (385)
T ss_pred cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------CC------cC----CCCCCEEEEEeCC
Confidence 2334444444443333322 2334455555566666665431 11 11 2246788888866
Q ss_pred HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 309 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 309 ~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.....++.+.+...|+.+..+.... . ..+.+++|||++....++.++.+.+.|++
T Consensus 329 ~~~~~~~~~~l~~~gI~v~~~~~~~---~-----------------~~~~~~lRis~~~~~~~~~i~~~l~~l~~ 383 (385)
T PRK05958 329 NERALALAAALQEQGFWVGAIRPPT---V-----------------PAGTSRLRITLTAAHTEADIDRLLEALAE 383 (385)
T ss_pred HHHHHHHHHHHHHCCceEecccCCC---C-----------------CCCCceEEEEecCCCCHHHHHHHHHHHHh
Confidence 5456678888888888776532100 0 01246799999754445555555555443
No 170
>cd06451 AGAT_like Alanine-glyoxylate aminotransferase (AGAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to alanine-glyoxylate aminotransferase (AGAT), serine-glyoxylate aminotransferase (SGAT), and 3-hydroxykynurenine transaminase (HKT). AGAT is a homodimeric protein, which catalyses the transamination of glyoxylate to glycine, and SGAT converts serine and glyoxylate to hydroxypyruvate and glycine. HKT catalyzes the PLP-dependent transamination of 3-hydroxykynurenine, a potentially toxic metabolite of the kynurenine pathway.
Probab=99.94 E-value=1.5e-24 Score=202.00 Aligned_cols=165 Identities=21% Similarity=0.237 Sum_probs=132.7
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
...+++++.+++++|.+ + .+++++|++++. ++.+++++||.|+++++.|++.. +...++..|.+++.++.+
T Consensus 32 ~~~~~~~~~la~~~g~~~~~~~~~~~~~t~al~~~~~~~~~~g~~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 109 (356)
T cd06451 32 ALMDEILEGLRYVFQTENGLTFLLSGSGTGAMEAALSNLLEPGDKVLVGVNGVFGDR--WADMAERYGADVDVVEKPWGE 109 (356)
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEecCcHHHHHHHHHHhCCCCCEEEEecCCchhHH--HHHHHHHhCCCeEEeecCCCC
Confidence 46889999999999984 3 445666789987 45567899999999988876531 235566788888888643
Q ss_pred --CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 --d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|++++++.+++ ++++|++++++||+|.+.|+++|.++|+++|+++++|++++.|... +....+.|++++|+||+++
T Consensus 110 ~~~~~~l~~~i~~~~~~~v~i~~~~~~~G~~~~~~~i~~~a~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K~l~ 189 (356)
T cd06451 110 AVSPEEIAEALEQHDIKAVTLTHNETSTGVLNPLEGIGALAKKHDALLIVDAVSSLGGEPFRMDEWGVDVAYTGSQKALG 189 (356)
T ss_pred CCCHHHHHHHHhccCCCEEEEeccCCCcccccCHHHHHHHHHhcCCEEEEeeehhccCccccccccCccEEEecCchhcc
Confidence 78999999986 8999999999999999999999999999999999999998866532 3344578999999999998
Q ss_pred cCCCceEEEEEEcChhHHHHH
Q 016612 204 GHSDVMAGVLAVKGERLAKEL 224 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~ 224 (386)
+|.| +|+++.+++ +.+.+
T Consensus 190 ~p~g--~G~l~~~~~-~~~~~ 207 (356)
T cd06451 190 APPG--LGPIAFSER-ALERI 207 (356)
T ss_pred CCCC--cceeEECHH-HHHHH
Confidence 8876 799998754 44433
No 171
>PLN02397 aspartate transaminase
Probab=99.94 E-value=1.1e-24 Score=206.25 Aligned_cols=283 Identities=15% Similarity=0.141 Sum_probs=174.7
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC---ceE-----EeCcHHHHH-HHHHHhcCCCCEEEecCCCCCcHHHHHhhhc
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD---RAL-----CFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i-----~~~~gt~al-~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
...|++. |.+ +|+++.+++.+..+.. +.+ +.++|+.++ ..++.++.|||+|++++|.|+.+. .++
T Consensus 84 ~~~Y~~~~G~~~LR~aia~~~~~~~~~~~~~~~i~~~~i~~g~Ga~~l~~~~~~~~~pGd~Vlv~~P~y~~y~----~~~ 159 (423)
T PLN02397 84 NKEYLPIEGLAEFNKLSAKLAYGADSPAIKENRVATVQCLSGTGSLRLGAEFLARFYPGSTIYIPNPTWGNHH----NIF 159 (423)
T ss_pred CCCCCCcCCCHHHHHHHHHHHcCCCCchhhcCeeEeeecccchHHHHHHHHHHHHhCCCCEEEEeCCCchhHH----HHH
Confidence 4479888 887 7888888886554321 222 223333333 345556679999999999999986 556
Q ss_pred ccCCcEEEEeCC-------CCHHHHHhhhC---CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 115 PKTGVVVKRVNT-------CDLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 115 ~~~g~~~~~v~~-------~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
+..|.+++.++. .|++.+++.+. ++++++++++||||||.+++ +++|+++|++||++||+||+|..-
T Consensus 160 ~~~g~~~~~v~l~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~P~NPTG~v~s~e~l~~i~~~a~~~~~~vI~De~Y~~l 239 (423)
T PLN02397 160 RDAGVPVRTYRYYDPKTRGLDFDGLLEDLKAAPDGSFVLLHACAHNPTGVDPTPEQWEQISDLIKSKNHLPFFDSAYQGF 239 (423)
T ss_pred HHcCCeEEEeecccCcCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEecccCCc
Confidence 678888888864 16777776664 56788989999999999986 678899999999999999998643
Q ss_pred CccC------C---C--CCCccEEEeccccccccCCCceEEEEE--EcChhHHH----HHHHhhhhcCCCCChhhHHHHH
Q 016612 182 VLSR------P---L--ELGADIVMHSATKFIAGHSDVMAGVLA--VKGERLAK----ELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 182 ~~~~------~---~--~~~~di~~~S~sK~~~g~~g~~~G~i~--~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
.+.. . . .....++++||||.+ +++|+|+||++ ..++.+.+ .+.........+.+...+.++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~vI~~~SfSK~~-~~~G~RvG~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~~ 318 (423)
T PLN02397 240 ASGDLDADAQSVRMFVEDGHEILVAQSYAKNM-GLYGERVGALSVVCKSADVAVRVKSQLKLIARPMYSNPPIHGASIVA 318 (423)
T ss_pred cCCchhhhhHHHHHHHhcCCcEEEEEECcccC-CCccccceEEEEEeCCHHHHHHHHHHHHHHHhcccCCCcHHHHHHHH
Confidence 3211 0 1 112468999999999 66789999985 44443332 2222222222234444455544
Q ss_pred hcCCcH----------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-eCCHHhHH
Q 016612 245 RGVKTM----------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGSLALSK 313 (386)
Q Consensus 245 ~~~~~~----------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~ 313 (386)
..+..- ....+.+.++.+.+.+.|++.. .+. ++.+. ...|+++.|. ++ .++++
T Consensus 319 ~~L~~~~~~~~~~~~~~~~~~~~~~rr~~l~~~L~~~~---------~~~--~~~~~----~p~gg~fl~~~l~-~~~~~ 382 (423)
T PLN02397 319 TILGDPELFSEWTKELKGMADRIISMRQKLYDALEARG---------SPG--DWSHI----TKQIGMFSFTGLN-KEQVD 382 (423)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------CCC--CCCcc----cCCceEEEecCCC-HHHHH
Confidence 444331 1112233333344444444321 000 11111 2245555554 54 34666
Q ss_pred HHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhc
Q 016612 314 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 383 (386)
Q Consensus 314 ~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~ 383 (386)
+++++.++. +. .++ |+++. .+++++++++|+++++.
T Consensus 383 ~Ll~~~~V~---v~-----------------------------~~~--Ri~~~~~~~~~i~~~~~~i~~~~~~ 421 (423)
T PLN02397 383 RMTKEYHIY---MT-----------------------------RDG--RISMAGLSSKNVPYLADAIHAVVTN 421 (423)
T ss_pred HHHHhCCEE---EC-----------------------------CCC--eEEEeeCCHHHHHHHHHHHHHHHhc
Confidence 666664443 21 122 77774 58899999999999864
No 172
>PRK03321 putative aminotransferase; Provisional
Probab=99.94 E-value=6.9e-25 Score=203.76 Aligned_cols=271 Identities=15% Similarity=0.193 Sum_probs=186.0
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
...++++.++++++.+ +.|++++|+ +++..+ ..++++||+|+++.|.|..+. ..++..|.+++.++.+
T Consensus 58 g~~~lr~~ia~~~~~~~~~I~~~~G~~~~l~~~~~~~~~~gd~Vli~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~ 133 (352)
T PRK03321 58 GAVELRAALAEHLGVPPEHVAVGCGSVALCQQLVQATAGPGDEVIFAWRSFEAYP----ILVQVAGATPVQVPLTPDHTH 133 (352)
T ss_pred cHHHHHHHHHHHhCcCHHHEEECCCHHHHHHHHHHHhcCCCCEEEeCCCCHHHHH----HHHHHcCCEEEEccCCCCCCC
Confidence 4567778888888776 467777787 666644 557899999999999997664 3456788998888864
Q ss_pred CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCCcc----CC----CCCCccEEEec
Q 016612 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLS----RP----LELGADIVMHS 197 (386)
Q Consensus 128 d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~~~----~~----~~~~~di~~~S 197 (386)
|++++++.++++++++++++|+||||.+.+.++|.++|+. +++++|+|++|...... .. ...+..++++|
T Consensus 134 ~~~~l~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~~~~~~~~ii~De~y~~~~~~~~~~~~~~~~~~~~~vi~~~S 213 (352)
T PRK03321 134 DLDAMAAAITDRTRLIFVCNPNNPTGTVVTPAELARFLDAVPADVLVVLDEAYVEYVRDDDVPDGLELVRDHPNVVVLRT 213 (352)
T ss_pred CHHHHHHhhccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEechHHHhccCcCCCcHHHHHhhCCCEEEEec
Confidence 7899999998899999999999999999999999999987 59999999998632221 11 11245789999
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCc
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRV 274 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~ 274 (386)
+||.+ |.+|+|+||++++ +.+.+.+.... .....+...+.++...+... ..+.++..+....+.+.+++.
T Consensus 214 ~SK~~-g~~GlRiG~~v~~-~~~~~~~~~~~--~~~~~s~~~q~~a~~~l~~~~~~~~~~~~~~~~r~~~~~~L~~~--- 286 (352)
T PRK03321 214 FSKAY-GLAGLRVGYAVGH-PEVIAALRKVA--VPFSVNSLAQAAAIASLAAEDELLERVDAVVAERDRVRAALRAA--- 286 (352)
T ss_pred chHHh-hhHHHhhhhhcCC-HHHHHHHHHhc--CCCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHC---
Confidence 99999 5568999999986 55666555432 23455666665554444332 222222223333333333322
Q ss_pred ceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhc
Q 016612 275 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 354 (386)
Q Consensus 275 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~ 354 (386)
++ .+ .+..|.++++.++. ...++.+.+...|+.+.+ +
T Consensus 287 ------~~------~~----~~~~g~~i~i~l~~--~~~~~~~~l~~~gI~v~~--~----------------------- 323 (352)
T PRK03321 287 ------GW------TV----PPSQANFVWLPLGE--RTADFAAAAAEAGVVVRP--F----------------------- 323 (352)
T ss_pred ------CC------cc----CCCCCCEEEEeCCC--CHHHHHHHHHHCCEEEEc--c-----------------------
Confidence 11 11 12246778887743 245677777777776543 0
Q ss_pred CCCCCeEEEEec-cCChHHHHHHHHHHHh
Q 016612 355 GLTEDLVRISVG-IEDVNDLISDLDKALR 382 (386)
Q Consensus 355 ~~~~~~iRis~~-~~~~~~~i~~l~~~l~ 382 (386)
+..+|||+++ .++++++++.|++++.
T Consensus 324 --~~~~iRi~~~~~~~~~~~~~al~~~~~ 350 (352)
T PRK03321 324 --AGEGVRVTIGAPEENDAFLRAARAWRA 350 (352)
T ss_pred --CCCcEEEeeCCHHHHHHHHHHHHHHhc
Confidence 1234999997 4999999999998764
No 173
>PRK14809 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-24 Score=202.77 Aligned_cols=309 Identities=18% Similarity=0.227 Sum_probs=188.1
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHH-H
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAV-T 87 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~-~ 87 (386)
..+++++.+...++..+ .+.++ +.. .. . ....|...| ...+++.++++++.+ +.|++++|+ ++++.+ .
T Consensus 30 ~~~i~l~~~~~~~~~~~-~~~~~--~~~-~~-~-~~~~Y~~~~---~~~lr~~ia~~~~~~~~~I~it~G~~~al~~~~~ 100 (357)
T PRK14809 30 DDLVKLSSNENPHGPSP-AAVEA--IRE-AA-E-RVHSYPKAS---HADLTAALADRWDVSPEQVWLANGGDGALDYLAR 100 (357)
T ss_pred cceeEecCCCCCCCCCH-HHHHH--HHH-HH-h-hhhcCCCCC---HHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 35778885544455332 22221 111 11 1 134565434 345666666666665 456666665 888754 5
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
+++++||.|++++|+|+.+. ..+...|..++.++.. +.+++.+.. ++++++++++|+||||.+.+.++
T Consensus 101 ~~~~~gd~V~v~~P~y~~~~----~~~~~~g~~~~~~~l~~~~~~~~~~~~~~~~~-~~~k~i~l~~p~NPTG~~~s~~~ 175 (357)
T PRK14809 101 AMLDPGDTVLVPDPGFAYYG----MSARYHHGEVREYPVSKADDFEQTADTVLDAY-DGERIVYLTSPHNPTGSEIPLDE 175 (357)
T ss_pred HhcCCCCEEEEeCCChHHHH----HHHHHcCCeEEEEecccCcCCCcCHHHHHHhh-cCCcEEEEeCCCCCCCcCCCHHH
Confidence 57899999999999997664 3344567777666542 455565544 46899999999999999998777
Q ss_pred HHHHHHHc--CCEEEEeCCCCCCCcc-C----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC
Q 016612 161 IAEMAHAH--GALLLVDNSIMSPVLS-R----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (386)
Q Consensus 161 i~~la~~~--~~~li~D~a~~~~~~~-~----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~ 233 (386)
+.++++.. +++||+||+|..-... . ....+..+++.|+||.+ +.+|+|+||+++++ ++.+.+..... ..
T Consensus 176 ~~~l~~~~~~~~~iI~De~y~~~~~~~~~~~~~~~~~~vi~~~SfSK~~-~~~GlRiG~~~~~~-~~~~~~~~~~~--~~ 251 (357)
T PRK14809 176 VEALAERTDEETLVVVDEAYGEFAERPSAVALVEERDDVAVLRTFSKAY-GLAGLRLGYAVVPE-EWADAYARVNT--PF 251 (357)
T ss_pred HHHHHHhCccCcEEEEechhhhccCCchhHHHHhhCCCEEEEecchhHh-cCcchhheeeecCH-HHHHHHHHhCC--CC
Confidence 77776653 7899999998632211 1 11124679999999999 55689999999874 45555544332 23
Q ss_pred CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHH
Q 016612 234 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSK 313 (386)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 313 (386)
..+...+.++...+.. ....++..+..+...+++.+. |... .+ +..|.++++.+.+ ..
T Consensus 252 ~~~~~~~~~a~~~l~~-~~~~~~~~~~~~~~r~~l~~~----------L~~~----~~----~~~g~f~~~~~~~---~~ 309 (357)
T PRK14809 252 AASELACRAGLAALDD-DEHVERTVETARWAREYIREE----------LDAP----TW----ESAGNFVLAEVGD---AS 309 (357)
T ss_pred CCCHHHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHH----------hcCc----cC----CCCCCEEEEECCC---HH
Confidence 4455555555555443 122222222222222222221 1110 00 1246778887753 34
Q ss_pred HHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-cCChHHHHHHHHHHHh
Q 016612 314 HVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-IEDVNDLISDLDKALR 382 (386)
Q Consensus 314 ~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-~~~~~~~i~~l~~~l~ 382 (386)
++.+.+...|+.+.+|..+. .+++|||+++ .+++++.+++|+++++
T Consensus 310 ~~~~~l~~~gv~v~~g~~f~-----------------------~~~~iRls~~~~~~~~~~l~~L~~~l~ 356 (357)
T PRK14809 310 AVAEAAQERGVIVRDCTSFG-----------------------LPECIRITCGTREETERAVEVLNEVLA 356 (357)
T ss_pred HHHHHHHHCCEEEEECccCC-----------------------CCCeEEEecCCHHHHHHHHHHHHHHhc
Confidence 56666667788877776421 1367999997 4778888888887765
No 174
>TIGR02006 IscS cysteine desulfurase IscS. This model represents IscS, one of several cysteine desulfurases from a larger protein family designated (misleadingly, in this case) class V aminotransferases. IscS is one of at least 6 enzymes characteristic of the IscSUA-hscAB-fsx system of iron-sulfur cluster assembly. Scoring almost as well as proteobacterial sequences included in the model are mitochondrial cysteine desulfurases, apparently from an analogous system in eukaryotes. The sulfur, taken from cysteine, may be used in other systems as well, such as tRNA base modification and biosynthesis of other cofactors.
Probab=99.93 E-value=3.7e-24 Score=202.12 Aligned_cols=160 Identities=21% Similarity=0.198 Sum_probs=130.9
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHh----cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~----~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..+++++.+++++|.+ +.++++++|++++.+ ..+ .++||+|+++.++|+++...+.. ++..|++++.++.+
T Consensus 48 ~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~Vi~~~~~h~s~~~~~~~-~~~~g~~v~~v~~~~ 126 (402)
T TIGR02006 48 AVENARNQVAELIGADSREIVFTSGATESNNLAIKGIAHFYKSKGNHIITSKTEHKAVLDTCRY-LEREGFEVTYLPPKS 126 (402)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEECCCccHHHHHHHHH-HHhcCCEEEEEccCC
Confidence 5777889999999976 345555556888744 332 36899999999999988766543 34678999888763
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|++++++.++++++++++++++||||.+.|+++|.++|+++|+++++|++++.|..+ +....+.|++++|++|++
T Consensus 127 ~~~~d~~~l~~~l~~~~~lv~v~~~~n~tG~~~~~~~I~~l~~~~g~~livD~a~a~g~~~~~~~~~~~D~~~~s~~K~~ 206 (402)
T TIGR02006 127 NGLIDLEELKAAIRDDTILVSIMHVNNEIGVIQDIAAIGEICRERKVFFHVDAAQSVGKIPINVNELKVDLMSISGHKIY 206 (402)
T ss_pred CCcCCHHHHHHhcCCCCEEEEEECCCcCceecccHHHHHHHHHHcCCEEEEEcchhcCCcccCccccCCCEEEEehhhhc
Confidence 899999999989999999999999999999999999999999999999999988765 444568999999999976
Q ss_pred ccCCCceEEEEEEcChh
Q 016612 203 AGHSDVMAGVLAVKGER 219 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~ 219 (386)
||.| .|+++++++.
T Consensus 207 -gp~G--~G~l~~~~~~ 220 (402)
T TIGR02006 207 -GPKG--IGALYVRRKP 220 (402)
T ss_pred -CCCc--eEEEEEccCC
Confidence 6777 6888887543
No 175
>PLN02409 serine--glyoxylate aminotransaminase
Probab=99.93 E-value=1.3e-24 Score=204.64 Aligned_cols=161 Identities=20% Similarity=0.180 Sum_probs=135.0
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
.+++++++.+++++|.+ + .+++++|++++.+ +..++++||+|+++++.|++.. |..+++..|.+++.++.+
T Consensus 42 ~~~~~~~~~l~~~~g~~~~~~vi~~~~gt~a~~~a~~~~~~~Gd~Vlv~~~~~~~~~--~~~~~~~~g~~v~~v~~~~~~ 119 (401)
T PLN02409 42 ALTKELLEDVKYIFKTKSGTPFIFPTTGTGAWESALTNTLSPGDKVVSFRIGQFSLL--WIDQMQRLNFDVDVVESPWGQ 119 (401)
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHhcCCCCCEEEEeCCCchhHH--HHHHHHHcCCceEEEECCCCC
Confidence 47899999999999875 2 4566667788864 5567899999999999887653 446677889998888753
Q ss_pred --CHHHHHhhhCC----CceEEEEeCCCCCCcccccHHHHHHH--HHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecc
Q 016612 128 --DLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIAEM--AHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (386)
Q Consensus 128 --d~~~l~~~~~~----~~~~v~~~~~~nptG~~~~l~~i~~l--a~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~ 198 (386)
|++++++.+++ ++++|++++++|+||.+.|+++|.++ |+++|+++++|++++.+..+ +..++++|+++.|.
T Consensus 120 ~~~~~~l~~~l~~~~~~~~k~v~~~~~~~~tG~~~~~~~i~~l~~~~~~g~~~vvD~v~s~g~~~id~~~~~~D~~~~s~ 199 (401)
T PLN02409 120 GADLDILKSKLRQDTNHKIKAVCVVHNETSTGVTNDLAGVRKLLDCAQHPALLLVDGVSSIGALDFRMDEWGVDVALTGS 199 (401)
T ss_pred CCCHHHHHHHHhhCcCCCccEEEEEeecccccccCCHHHHHHHHhhhccCcEEEEEcccccCCccccccccCccEEEEcC
Confidence 78999998875 79999999999999999999999999 99999999999999987764 34557899999999
Q ss_pred ccccccCCCceEEEEEEcChh
Q 016612 199 TKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~ 219 (386)
|||+++|+| .|+++.+++.
T Consensus 200 ~K~l~~P~G--~G~l~~~~~~ 218 (401)
T PLN02409 200 QKALSLPTG--LGIVCASPKA 218 (401)
T ss_pred ccccCcCCC--cceeEECHHH
Confidence 999998887 7999987553
No 176
>PRK09331 Sep-tRNA:Cys-tRNA synthetase; Provisional
Probab=99.93 E-value=2.3e-24 Score=202.21 Aligned_cols=159 Identities=21% Similarity=0.232 Sum_probs=135.7
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC------
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------ 126 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------ 126 (386)
.+..+++++.+++++|.++.++++++++++. ++.+++++||+|+++.++|.+... .++..|++++.++.
T Consensus 62 ~~~~~~l~~~lA~~~g~~~~~~~~g~t~a~~~al~~l~~~gd~Vlv~~~~h~s~~~----~~~~~G~~~~~v~~~~~~~~ 137 (387)
T PRK09331 62 KPPIADFHEDLAEFLGMDEARVTHGAREGKFAVMHSLCKKGDYVVLDGLAHYTSYV----AAERAGLNVREVPKTGYPEY 137 (387)
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhcCCCCEEEECCCchHHHHH----HHHHcCCEEEEEeCccCcCC
Confidence 4579999999999999998888888888886 566688999999999999887753 34567899998876
Q ss_pred -CCHHHHHhhhC-------CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEec
Q 016612 127 -CDLDEVASAIG-------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHS 197 (386)
Q Consensus 127 -~d~~~l~~~~~-------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S 197 (386)
.|++++++.++ +++++|++++|+|++|.+.|+++|.++|+++|+++++|++|+.|..+ +....++|++++|
T Consensus 138 ~~d~~~l~~~l~~~~~~~~~~~~lV~l~~~~~~tG~~~~l~~I~~la~~~g~~livD~a~~~g~~~~~~~~~g~D~~~~s 217 (387)
T PRK09331 138 KITPEAYAEKIEEVKEETGKPPALALLTHVDGNYGNLADAKKVAKVAHEYGIPFLLNGAYTVGRMPVDGKKLGADFIVGS 217 (387)
T ss_pred CcCHHHHHHHHHHhhhccCCCCEEEEEECCCCCCcccccHHHHHHHHHHcCCEEEEECCcccCCcCCCHHHcCCCEEEee
Confidence 27899998875 26899999999999999999999999999999999999999988653 3345689999999
Q ss_pred cccccccCCCceEEEEEEcCh
Q 016612 198 ATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~ 218 (386)
+||++++++| +|+++++++
T Consensus 218 ~~K~l~~~~~--~G~l~~~~~ 236 (387)
T PRK09331 218 GHKSMAASAP--SGVLATTEE 236 (387)
T ss_pred CcccccCCCC--EEEEEECHH
Confidence 9999977654 899998754
No 177
>PRK07908 hypothetical protein; Provisional
Probab=99.93 E-value=5e-24 Score=197.61 Aligned_cols=278 Identities=16% Similarity=0.183 Sum_probs=179.9
Q ss_pred ccccCC-CCchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEE
Q 016612 47 YDYTRS-GNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR 123 (386)
Q Consensus 47 ~~y~~~-g~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (386)
..|.+. |. .++++.+++++|.+ +.|++++|+ +++..+.. +++| .+++..|+|..+. ..++..|++++.
T Consensus 52 ~~Y~~~~g~---~~lr~aia~~~~~~~~~I~it~Ga~~al~~~~~-l~~~-~viv~~P~y~~~~----~~~~~~G~~i~~ 122 (349)
T PRK07908 52 AAYPSTEDE---RRARAAVAARHGRTPDEVLLLAGAAEGFALLAR-LRPR-RAAVVHPSFTEPE----AALRAAGIPVHR 122 (349)
T ss_pred hcCCCccch---HHHHHHHHHHhCcChhhEEECCCHHHHHHHHHh-cCCC-eEEEeCCCChHHH----HHHHHcCCEEEe
Confidence 346554 43 35556666666665 566666665 88987666 6775 5677889997774 455678999998
Q ss_pred eCCC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCC---CccCC--CCCCccE
Q 016612 124 VNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSP---VLSRP--LELGADI 193 (386)
Q Consensus 124 v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~---~~~~~--~~~~~di 193 (386)
++.+ |++ .++++++++++++|+||||.+.+.++|.++|++ +.++|+||+|+.- ..... ...+..+
T Consensus 123 v~~~~~~~~d~~----~l~~~~~~i~l~np~NPTG~~~~~~~l~~l~~~-~~~iIvDe~y~~~~~~~~~~l~~~~~~~~i 197 (349)
T PRK07908 123 VVLDPPFRLDPA----AVPDDADLVVIGNPTNPTSVLHPAEQLLALRRP-GRILVVDEAFADAVPGEPESLAGDDLPGVL 197 (349)
T ss_pred eccCcccCcChh----HhccCCCEEEEcCCCCCCCCCcCHHHHHHHHhc-CCEEEEECcchhhccCCccccccccCCCEE
Confidence 8864 333 345678999999999999999999999999975 7889999998631 11111 1224568
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHH
Q 016612 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 194 ~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l 268 (386)
++.|+||.+ +.+|+|+||++++ +.+.+.+...... ...+.....++...+. .+....+.+.++.+.+.+.|
T Consensus 198 ~i~S~SK~~-~l~GlRiG~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~r~~l~~~L 273 (349)
T PRK07908 198 VLRSLTKTW-SLAGLRVGYALGA-PDVLARLTRGRAH--WPVGTLQLEAIAACCAPRAVAEAAADAARLAADRAEMVAGL 273 (349)
T ss_pred EEeeccccc-CCccceeeeeecC-HHHHHHHHhcCCC--CCccHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 889999998 6678999999986 4455555443332 2334444433322222 12222233333444444444
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCH
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 348 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~ 348 (386)
++. ++.+. . ...+.++++.+++ .+.+.+.++..|+.+.+|..+.
T Consensus 274 ~~~---------------~~~~~--~-p~~g~~~~~~~~~---~~~~~~~l~~~gI~v~~g~~f~--------------- 317 (349)
T PRK07908 274 RAV---------------GARVV--D-PAAAPFVLVRVPD---AELLRKRLRERGIAVRRGDTFP--------------- 317 (349)
T ss_pred HhC---------------CcEec--c-CCCceEEEEECCc---HHHHHHHHHhCCEEEEECCCCC---------------
Confidence 432 11111 1 1247788888865 3466667777788887776521
Q ss_pred HHHHhcCCCCCeEEEEec-cCChHHHHHHHHHHHhcC
Q 016612 349 EVRQARGLTEDLVRISVG-IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 349 ~~~~~~~~~~~~iRis~~-~~~~~~~i~~l~~~l~~~ 384 (386)
+..+++||||++ .++++++++.|++.+.+.
T Consensus 318 ------~~~~~~vRis~~~~~~~~~l~~al~~~~~~~ 348 (349)
T PRK07908 318 ------GLDPDYLRLAVRPRAEVPVLVQALAEILKAG 348 (349)
T ss_pred ------CCCCCeEEEEeCCCccHHHHHHHHHHHHhcc
Confidence 113578999997 489999999999887654
No 178
>PRK02948 cysteine desulfurase; Provisional
Probab=99.93 E-value=3.7e-24 Score=201.08 Aligned_cols=300 Identities=16% Similarity=0.176 Sum_probs=188.4
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcH-HHHHHH-HHHhc----CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSG-MAALAA-VTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~g-t~al~~-~~~~~----~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..+++++.+++++|.+ +.|++++| ++++.. +.+++ ++||.|++++..|+++...+. .++..|.+++.++.+
T Consensus 44 ~~~~~r~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~~~~~g~~vv~~~~~h~s~~~~~~-~~~~~g~~v~~v~~~~ 122 (381)
T PRK02948 44 LLQVCRKTFAEMIGGEEQGIYFTSGGTESNYLAIQSLLNALPQNKKHIITTPMEHASIHSYFQ-SLESQGYTVTEIPVDK 122 (381)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCcHHHHHHHHHHHHHHhccCCCCEEEECCcccHHHHHHHH-HHHhCCCEEEEEeeCC
Confidence 5788899999999865 55655555 688764 44443 578999999999988876663 456789998888753
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|++++++.+++++++|++++++||||.+.|+++|.++|+++|+++++|++++.+... +....++|++++|+||++
T Consensus 123 ~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~vivD~~~~~g~~~~~~~~~~~d~~~~s~~K~~ 202 (381)
T PRK02948 123 SGLIRLVDLERAITPDTVLASIQHANSEIGTIQPIAEIGALLKKYNVLFHSDCVQTFGKLPIDVFEMGIDSLSVSAHKIY 202 (381)
T ss_pred CCCCCHHHHHHhcCCCCEEEEEECCcCCcEeehhHHHHHHHHHHcCCEEEEEChhhccccccCcccCCCCEEEecHHhcC
Confidence 789999999889999999999999999999999999999999999999998877643 334568999999999987
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHh---hh-hcCCCCChhhHHHHHhcCCcH----HHHHHHHHHHHHHHHHHHhhCCCc
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFL---QN-AEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLASHPRV 274 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~~~~~ 274 (386)
||+| .|+++++++......... .. ......+......+..+++.. ....++..+..+.+.+.+++.. +
T Consensus 203 -gp~G--~G~l~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~ 278 (381)
T PRK02948 203 -GPKG--VGAVYINPQVRWKPVFPGTTHEKGFRPGTVNVPGIAAFLTAAENILKNMQEESLRFKELRSYFLEQIQTLP-L 278 (381)
T ss_pred -CCCc--EEEEEEcCCCCCCCcccCCCCCCCcCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-C
Confidence 6777 688888754211111100 00 011123333333333333322 2222333344444444444332 0
Q ss_pred ceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccc-ccccccccCCCCCHHHHHh
Q 016612 275 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL-ISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 275 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~-~~~p~~~~~~~~~~~~~~~ 353 (386)
.....+ ........++.+.++... .+.+...+..+||.++.|..++. +..|. ....+
T Consensus 279 -~v~~~~-----------~~~~~~~~i~~~~~~~~~-~~~~~~~l~~~gI~v~~g~~c~~~~~~p~---------~~~~~ 336 (381)
T PRK02948 279 -PIEVEG-----------HSTSCLPHIIGVTIKGIE-GQYTMLECNRRGIAISTGSACQVGKQEPS---------KTMLA 336 (381)
T ss_pred -CEEEeC-----------CCccCcCCEEEEEeCCCC-HHHHHHhcccCCEEEEchHhcCCCCCCCC---------HHHHH
Confidence 011000 000112346667665433 45666777888999888765321 11111 11112
Q ss_pred cCC----CCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 354 RGL----TEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 354 ~~~----~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
++. ..+++|+|++. ++++.+++.|++.++
T Consensus 337 ~~~~~~~~~~~lRis~~~~~t~~di~~l~~~l~~~~~ 373 (381)
T PRK02948 337 IGKTYEEAKQFVRFSFGQQTTKDQIDTTIHALETIGN 373 (381)
T ss_pred cCCChHHhCceEEEEcCCCCCHHHHHHHHHHHHHHHH
Confidence 222 24789999985 555555555555443
No 179
>PRK09064 5-aminolevulinate synthase; Validated
Probab=99.93 E-value=5.2e-24 Score=201.65 Aligned_cols=324 Identities=19% Similarity=0.169 Sum_probs=204.3
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCC-CccccC--CC-CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-H
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG-PYDYTR--SG-NPTRDALESLLAKLDKADRALCFTSGMAALA-A 85 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~y~~--~g-~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~ 85 (386)
..+++++ +|||+|..++|......... +...+ ....++ +| .+...++++.+++++|.++.+++++|+++.. +
T Consensus 46 ~~~~~~~-s~dylgl~~~p~v~~a~~~~--~~~~~~~~~~s~~~~g~~~~~~~l~~~la~~~g~~~~~~~~sG~~an~~a 122 (407)
T PRK09064 46 REVTVWC-SNDYLGMGQHPKVIEAMIEA--LDRCGAGAGGTRNISGTNHYHVELERELADLHGKEAALVFTSGYVSNDAT 122 (407)
T ss_pred ceEEEEE-CCCCcCCCCCHHHHHHHHHH--HHHcCCCCCCcCcCccCHHHHHHHHHHHHHHhCCCcEEEECcHHHHHHHH
Confidence 4578999 99999999777543211111 11111 111122 23 3578999999999999888999999997754 4
Q ss_pred HHHhc--CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC----CCceEEEEeCCCCCCcccccHH
Q 016612 86 VTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 86 ~~~~~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~ 159 (386)
+..+. .+++.|+.....|.+....+ ...+.++..++..|++++++.++ +++++|++++++||+|.+.|++
T Consensus 123 i~~l~~~~~~~~i~~~~~~h~s~~~~~----~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~v~s~~G~~~~l~ 198 (407)
T PRK09064 123 LSTLAKLIPDCVIFSDELNHASMIEGI----RRSRCEKHIFRHNDVAHLEELLAAADPDRPKLIAFESVYSMDGDIAPIA 198 (407)
T ss_pred HHHHhCCCCCCEEEEeCcchHHHHHHH----HHcCCcEEEECCCCHHHHHHHHHhccCCCCeEEEEeCCCCCCccccCHH
Confidence 44343 37776666666665554322 34566777777778888888775 5789999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCccC---------CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 230 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~ 230 (386)
+|.++|+++|+++|+||+|+.|.+.. ......|++++|+||.++. . +|+++++ +++.+.+......
T Consensus 199 ~i~~l~~~~~~~livDEa~~~G~~g~~g~g~~~~~~~~~~~div~~t~sKa~g~-~---GG~~~~~-~~~~~~l~~~~~~ 273 (407)
T PRK09064 199 EICDLADKYNALTYLDEVHAVGMYGPRGGGIAERDGLMDRIDIIEGTLAKAFGV-M---GGYIAGS-AALVDAVRSYAPG 273 (407)
T ss_pred HHHHHHHHcCCEEEEECCCcccccCCCCCChHHhcCCCCCCeEEEEecchhhhc-c---CceEecC-HHHHHHHHHhCcc
Confidence 99999999999999999997554321 0112458999999999953 3 4888876 4555544433221
Q ss_pred --cCCCCChhhHHHHHhcCCcHH---HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE
Q 016612 231 --EGSGLAPFDCWICLRGVKTMA---LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 305 (386)
Q Consensus 231 --~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 305 (386)
...+.++....++..+++.+. ...++..++.+.+.+.+++. +++.. ...++++.+.
T Consensus 274 ~~~t~~~~~~~~~aa~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~---------g~~~~----------~~~~~iv~i~ 334 (407)
T PRK09064 274 FIFTTSLPPAIAAAALASIRHLKESNEERERHQERAAKLKAALDAA---------GIPVM----------PNESHIVPVM 334 (407)
T ss_pred ccccCcCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHc---------CCCCC----------CCCCCEEEEE
Confidence 123445544444444443322 22344455555555555542 11111 1235677777
Q ss_pred eCCHHhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 016612 306 TGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 380 (386)
Q Consensus 306 ~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 380 (386)
+++......+.+.+. ..|+.+++.. +|.. ..+.+++||+++. ++++++++.|+++
T Consensus 335 ~~~~~~~~~l~~~L~~~~gi~v~~~~------~p~~--------------~~~~~~lRis~~~~~t~edi~~l~~~l~~~ 394 (407)
T PRK09064 335 VGDPEKCKKASDMLLEEHGIYVQPIN------YPTV--------------PRGTERLRITPTPFHTDEMIDHLVEALVEV 394 (407)
T ss_pred eCCHHHHHHHHHHHHHhCCEEEeeEC------CCCC--------------CCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 765444666777664 3477655421 1100 0123569999974 7777777777777
Q ss_pred HhcCC
Q 016612 381 LRTGP 385 (386)
Q Consensus 381 l~~~~ 385 (386)
+++.+
T Consensus 395 ~~~~~ 399 (407)
T PRK09064 395 WARLG 399 (407)
T ss_pred HHHcC
Confidence 76553
No 180
>PRK09257 aromatic amino acid aminotransferase; Provisional
Probab=99.93 E-value=2.5e-24 Score=202.89 Aligned_cols=166 Identities=19% Similarity=0.149 Sum_probs=125.5
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC----Cce-EEeCcHH-HHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhh
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----DRA-LCFTSGM-AALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRV 113 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~-i~~~~gt-~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~ 113 (386)
....|++. |.+ +|+++.+++.+..+. ++. +++|+|+ +|+..+.. .++|||+|++++|+|+.+. .+
T Consensus 61 ~~~~Y~~~~G~~~lR~aia~~~~~~~~~~~~~~~i~v~iT~Ga~~al~~~~~~l~~~~pGd~Vlv~~P~y~~~~----~~ 136 (396)
T PRK09257 61 TTKNYLPIEGLAAYRQAVQELLFGADSPALAAGRVATVQTPGGTGALRVGADFLKRAFPDAKVWVSDPTWPNHR----AI 136 (396)
T ss_pred cCCCcCCCCCCHHHHHHHHHHhcCCCCcccccCeEEEEecCCccHHHHHHHHHHHHhCCCCeEEECCCCcccHH----HH
Confidence 34468887 886 899999988765432 233 3566664 99875532 3589999999999999996 55
Q ss_pred cccCCcEEEEeCC-------CCHHHHHhhhC---CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 114 TPKTGVVVKRVNT-------CDLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 114 ~~~~g~~~~~v~~-------~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
++..|.+++.++. .|++++++.+. +++.++++++||||||.+.+ +++|+++|++||+++|+|++|..
T Consensus 137 ~~~~g~~~v~v~~~~~~~~~~d~~~l~~~~~~~~~~~~~~i~~~p~NPTG~~~s~~~~~~l~~~a~~~~~~ii~De~Y~~ 216 (396)
T PRK09257 137 FEAAGLEVKTYPYYDAATKGLDFDAMLADLSQAPAGDVVLLHGCCHNPTGADLTPEQWDELAELLKERGLIPFLDIAYQG 216 (396)
T ss_pred HHHcCCcEEEEeccccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccc
Confidence 6678899888874 17788888765 34567777999999999986 78899999999999999999864
Q ss_pred CCcc--C---C----C-CCCccEEEeccccccccCCCceEEEEEE
Q 016612 181 PVLS--R---P----L-ELGADIVMHSATKFIAGHSDVMAGVLAV 215 (386)
Q Consensus 181 ~~~~--~---~----~-~~~~di~~~S~sK~~~g~~g~~~G~i~~ 215 (386)
-... . + . ..+..++++|+||.+ +++|+|+||+++
T Consensus 217 l~~~~~~~~~~~~~~~~~~~~vi~i~SfSK~~-~~~GlRiG~~~~ 260 (396)
T PRK09257 217 FGDGLEEDAYGLRAFAAAGLELLVASSFSKNF-GLYGERVGALSV 260 (396)
T ss_pred cccchHHHHHHHHHHHhcCCcEEEEEEcCCcC-ccccccceeEEE
Confidence 2221 0 0 1 123579999999999 667899999984
No 181
>PRK03967 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-24 Score=200.64 Aligned_cols=271 Identities=18% Similarity=0.205 Sum_probs=175.3
Q ss_pred ccccCCCCchHHHHHHHHHhhcCCC-ceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 47 YDYTRSGNPTRDALESLLAKLDKAD-RALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 47 ~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
..|...| ..++++.++++++.+ +.|++++|+ +++..+...+ +||+|+++.|.|+.+. .+++..|.+++.+
T Consensus 50 ~~Y~~~g---~~~lr~~ia~~~~~~~~~I~~t~G~~~~l~~~~~~~-~gd~V~v~~P~y~~~~----~~~~~~g~~~~~v 121 (337)
T PRK03967 50 NRYPHIT---SDPLREAIAEFYGLDAENIAVGNGSDELISYLVKLF-EGKHIVITPPTFGMYS----FYAKLNGIPVIDV 121 (337)
T ss_pred ccCCCCC---HHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHh-CCCeEEEeCCChHHHH----HHHHHcCCeEEEe
Confidence 4454334 345666666666655 556566665 8888766655 7999999999998664 4556788999888
Q ss_pred CCC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC----CCCCCccEEE
Q 016612 125 NTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR----PLELGADIVM 195 (386)
Q Consensus 125 ~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~----~~~~~~di~~ 195 (386)
+.+ |++++++.. ++++++++++|+||||.+.+.++|.++++ +++++|+||+|..-.... .......+++
T Consensus 122 ~~~~~~~~d~~~l~~~~-~~~~~v~~~~P~NPtG~~~~~~~l~~i~~-~~~~ii~De~y~~~~~~~~~~~~~~~~~vi~l 199 (337)
T PRK03967 122 PLKEDFTIDGERIAEKA-KNASAVFICSPNNPTGNLQPEEEILKVLE-TGKPVVLDEAYAEFSGKSLIGLIDEYPNLILL 199 (337)
T ss_pred ecCCCCCcCHHHHHHhc-cCCCEEEEeCCCCCCCCCCCHHHHHHHHh-cCCEEEEECchhhhcccchHHHHhhCCCEEEE
Confidence 763 677887765 57889999999999999999999999995 699999999986321111 1112457999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH---HHHHHHHHHHHHHHHHhhCC
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL---RVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~l~~~~ 272 (386)
.|+||.+ +.+|+|+||++++ +.+.+.+...... ...+...+.++...++.... +.....++.+.+.+.|.+.
T Consensus 200 ~S~SK~~-~l~GlRiG~iv~~-~~~i~~~~~~~~~--~~~~~~~q~~~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~- 274 (337)
T PRK03967 200 RTFSKAF-GLAGIRAGYAIAN-EEIIDALYRIKPP--FSLNILTMKIVRLALDHYDLIEERIDYIIKERERVRRELGEY- 274 (337)
T ss_pred ecchHhh-cchhhhheeeecC-HHHHHHHHhhcCC--CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhccC-
Confidence 9999999 5568999999986 4565555544332 34456666665554443221 1112222222222222211
Q ss_pred CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 273 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
. . +..+.++++.++ +.+.+...|+.++.+..
T Consensus 275 -----------------~---~-~~~~~~~~~~~~-------~~~~l~~~gi~v~~~~~--------------------- 305 (337)
T PRK03967 275 -----------------A---Y-PSDANFLLLKLD-------AYDYLLENGIVVRKLSG--------------------- 305 (337)
T ss_pred -----------------c---C-CCCCcEEEEhHH-------HHHHHHHCCEEEEeCCC---------------------
Confidence 0 0 223566666542 33444445666543221
Q ss_pred hcCCCCCeEEEEecc-CChHHHHHHHHHHHhcC
Q 016612 353 ARGLTEDLVRISVGI-EDVNDLISDLDKALRTG 384 (386)
Q Consensus 353 ~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~ 384 (386)
..++++||+++. ++.+++++.|++.++..
T Consensus 306 ---~~~~~~Ri~~~~~~~~~~l~~~l~~~~~~~ 335 (337)
T PRK03967 306 ---RLEGHIRVTVGKREENDEFIKALKEIKEGY 335 (337)
T ss_pred ---CCCCeEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 125679999986 78899999998877644
No 182
>PF00266 Aminotran_5: Aminotransferase class-V; InterPro: IPR000192 Aminotransferases share certain mechanistic features with other pyridoxal- phosphate dependent enzymes, such as the covalent binding of the pyridoxal- phosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. This entry represents the class V aminotransferases and the related, though functionally distinct, cysteine desulfurases.; GO: 0008152 metabolic process; PDB: 3FFR_A 1N2T_B 1ELQ_A 1N31_A 1ELU_B 1QZ9_A 1VJO_A 3ISL_B 1BJO_B 1BJN_B ....
Probab=99.93 E-value=2e-24 Score=202.12 Aligned_cols=289 Identities=25% Similarity=0.303 Sum_probs=199.5
Q ss_pred chHHHHHHHHHhhcCCCc---eEEeCcHHHHHHHH-HHh---cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 55 PTRDALESLLAKLDKADR---ALCFTSGMAALAAV-THL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~---~i~~~~gt~al~~~-~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
+..+++++.+++++|.+. .++++++|.+++.+ .++ +++|++|++.+.+|++....|..+.+..|++++.++.+
T Consensus 43 ~~~~~~r~~la~~lg~~~~~~v~~~~~~t~a~~~~~~~l~~~~~~g~~vl~~~~~~~s~~~~~~~~~~~~g~~v~~i~~~ 122 (371)
T PF00266_consen 43 EILEEAREALAKLLGAPPDEEVVFTSNGTEALNAVASSLLNPLKPGDEVLVTSNEHPSNRYPWEEIAKRKGAEVRVIPAD 122 (371)
T ss_dssp HHHHHHHHHHHHHHTSSTTEEEEEESSHHHHHHHHHHHHHHHGTTTCEEEEEESSHHHHHHHHHHHHHHTTEEEEEEEEG
T ss_pred HHHHHHHHHHHHhcCCccccccccccccchhhhhhhhccccccccccccccccccccccccccccccccchhhhcccccc
Confidence 367899999999999874 44556667888754 445 69999999999999999888888888999999888752
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.+++++++|++++.+|.+|...|+++|.++||++|+++++|.+++.|..+ +..+.++|++++|.+|
T Consensus 123 ~~~~~~~~~~~~~l~~~~~lv~~~~~~~~tG~~~pi~~I~~~~~~~~~~~~vD~~~~~g~~~id~~~~~~D~~~~s~~K- 201 (371)
T PF00266_consen 123 PGGSLDLEDLEEALNPDTRLVSISHVENSTGVRNPIEEIAKLAHEYGALLVVDAAQSAGCVPIDLDELGADFLVFSSHK- 201 (371)
T ss_dssp TTSSCSHHHHHHHHHTTESEEEEESBETTTTBBSSHHHHHHHHHHTTSEEEEE-TTTTTTSS--TTTTTESEEEEESTS-
T ss_pred ccchhhhhhhhhhhccccceEEeecccccccEEeeeceehhhhhccCCceeEechhccccccccccccccceeeecccc-
Confidence 899999999999999999999999999999999999999999999999999988865 4556799999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcC--------------------CCCCh-hhHHHHHhcCCcH-----HHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------------------SGLAP-FDCWICLRGVKTM-----ALRVE 255 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~--------------------~~~~~-~~~~~~~~~~~~~-----~~~~~ 255 (386)
++||+| .|+++++++ ..+.++....... .+..+ .....+..+++.+ ....+
T Consensus 202 l~gp~G--~g~l~v~~~-~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~GT~~~~~~~~l~~al~~~~~~g~~~i~~ 278 (371)
T PF00266_consen 202 LGGPPG--LGFLYVRPE-AIERLRPAKPGGGYLDFPSLQEYGLADDARRFEGGTPNVPAIYALNEALKLLEEIGIERIRE 278 (371)
T ss_dssp TTSSST--EEEEEEEHH-HHHHHHTSSSSSSTTTHHHHHHHCHHSTTTGSSSSS--HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCc--hhhheehhh-hhhccccccccccccccccchhcccccccccccccceeeehhhhHHHHHhhhhccccccchh
Confidence 778998 699999865 4333422111110 11111 1122222222221 11223
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhh-hccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY-SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 334 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~ 334 (386)
+..+..+.+.+.+.+.+. ..++. .....+++++++.+++.+ ...+.+.+...+|.++.|....
T Consensus 279 ~~~~l~~~~~~~l~~~~~--------------~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~L~~~~I~~~~G~~~~- 342 (371)
T PF00266_consen 279 RIRELAEYLREALEELPG--------------IEVLGPDDEPRRPSIVSFNLPGSD-ADDVVKYLEERGIAVSTGSACA- 342 (371)
T ss_dssp HHHHHHHHHHHHHHHTTT--------------EEESSSSCGGBGTTEEEEEETTSS-HHHHHHHHHHHTEEEEESTTTC-
T ss_pred hhhhHHHHHHhhhhcCCc--------------eeEeeecccccccceEEEeecCCC-HHHHHHHHhhcCEEEeccCccc-
Confidence 333444555555555442 22222 122345789999995543 5777777777788877766532
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 016612 335 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 377 (386)
Q Consensus 335 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 377 (386)
.|. ....+. .+.||+|++..++++.|+.|
T Consensus 343 --~~~-----------~~~~~~-~~~iRvS~~~~nt~~dv~~l 371 (371)
T PF00266_consen 343 --GPS-----------LDILGM-GGVIRVSLHYYNTEEDVDRL 371 (371)
T ss_dssp --HHH-----------HHHHHT-TTEEEEE-GTTSSHHHHHHH
T ss_pred --HHH-----------HHHhCC-CCEEEEeccCCCCHHHHhhC
Confidence 110 000111 37799999998888888765
No 183
>cd00609 AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). Pyridoxal phosphate combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary hi
Probab=99.93 E-value=1.4e-23 Score=194.90 Aligned_cols=292 Identities=21% Similarity=0.224 Sum_probs=194.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcC----CCceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDK----ADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.. +++++.+.+....+ .++.+++++|++++.. +..+.++||+|+++++.|+++. ..++..|
T Consensus 29 ~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~g~~vl~~~~~~~~~~----~~~~~~~ 104 (350)
T cd00609 29 LLGYYPDPGLPELREAIAEWLGRRGGVDVPPEEIVVTNGAQEALSLLLRALLNPGDEVLVPDPTYPGYE----AAARLAG 104 (350)
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCcceEEEecCcHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHCC
Confidence 3445544 544 67777777777655 3356677777788875 4556788999999999999886 4455677
Q ss_pred cEEEEeCCC-----CH--HHHHhhhCCCceEEEEeCCCCCCcccccHH---HHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNTC-----DL--DEVASAIGPWTKLVWVESPTNPRQQICDIR---KIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~~-----d~--~~l~~~~~~~~~~v~~~~~~nptG~~~~l~---~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++.. +. +.++...++++++|++++++||+|.+.|.+ +|.++|+++|+++|+|++++.+...
T Consensus 105 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~i~~~~~~tG~~~~~~~l~~l~~~~~~~~~~~ivD~a~~~~~~~~~~~ 184 (350)
T cd00609 105 AEVVPVPLDEEGGFLLDLELLEAAKTPKTKLLYLNNPNNPTGAVLSEEELEELAELAKKHGILIISDEAYAELVYDGEPP 184 (350)
T ss_pred CEEEEEecccccCCccCHHHHHhhcCccceEEEEECCCCCCCcccCHHHHHHHHHHHHhCCeEEEEecchhhceeCCccc
Confidence 888888764 22 566666678999999999999999999755 5558999999999999998754321
Q ss_pred ----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHH
Q 016612 185 ----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEK 256 (386)
Q Consensus 185 ----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 256 (386)
.....+.|++++|++|+++ .+|++.|+++++++.+.+.+...........+.....++...+.. +....+.
T Consensus 185 ~~~~~~~~~~~~~~~~s~~K~~~-~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 263 (350)
T cd00609 185 PALALLDAYERVIVLRSFSKTFG-LPGLRIGYLIAPPEELLERLKKLLPYTTSGPSTLSQAAAAAALDDGEEHLEELRER 263 (350)
T ss_pred ccccCcCccCcEEEEeecccccC-CcccceEEEecCHHHHHHHHHHHHHhcccCCChHHHHHHHHHHhCcHHHHHHHHHH
Confidence 1234467999999999995 446789999998656766666555443344455555444443333 2333445
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLIS 336 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~ 336 (386)
..++.+.+.+.+++.... . . .....+.++++.+++......+.+.+...|+.+..+..+..
T Consensus 264 ~~~~~~~l~~~L~~~~~~---~---~-----------~~~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~i~~~~~~~~-- 324 (350)
T cd00609 264 YRRRRDALLEALKELGPL---V---V-----------VKPSGGFFLWLDLPEGDDEEFLERLLLEAGVVVRPGSAFGE-- 324 (350)
T ss_pred HHHHHHHHHHHHHhcCCc---c---c-----------cCCCccEEEEEecCCCChHHHHHHHHHhCCEEEeccccccc--
Confidence 556666666666655311 0 0 01234567777776543455666777777887665543110
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 337 MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 337 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
....++|++++.. .+.++.+.++|+
T Consensus 325 -------------------~~~~~iRi~~~~~--~~~i~~~~~al~ 349 (350)
T cd00609 325 -------------------GGEGFVRLSFATP--EEELEEALERLA 349 (350)
T ss_pred -------------------CCCCeEEEEeeCC--HHHHHHHHHHhh
Confidence 1356799999876 555555555554
No 184
>PRK09275 aspartate aminotransferase; Provisional
Probab=99.93 E-value=8e-24 Score=201.46 Aligned_cols=168 Identities=17% Similarity=0.249 Sum_probs=123.7
Q ss_pred cccCC-CCc-hHHHHHHHHH-hhc-C---C--C-ceEEeCcHHHHHH-HHHH-----hcCCCCEEEecCCCCCcHHHHHh
Q 016612 48 DYTRS-GNP-TRDALESLLA-KLD-K---A--D-RALCFTSGMAALA-AVTH-----LLGTGEEIVAGDDLYGGTDRLLS 111 (386)
Q Consensus 48 ~y~~~-g~~-~~~~l~~~l~-~~~-g---~--~-~~i~~~~gt~al~-~~~~-----~~~~g~~Vlv~~~~~~~~~~~~~ 111 (386)
.|+.. |.+ +++++.+.+. +.. + . + +++++.++++++. ++.+ +++|||+|++++|.|+.+.....
T Consensus 129 ~Y~~~~g~~~lreaia~~~~~~~~~~~~~~~~~~~I~vT~Ga~~al~~~~~aL~~~~ll~pGD~Vlv~~P~y~~Y~~~~~ 208 (527)
T PRK09275 129 NYPVPDRMLKHTEKIVKDYLRQEMCGGRPPKGEFDLFAVEGGTAAMCYIFDSLKENGLLKAGDKIALMTPIFTPYLEIPE 208 (527)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhhhhcCCCCCEEEEeCCChHHHHHHHH
Confidence 48887 876 7888887543 322 2 1 2 3445555568886 4443 68999999999999999864321
Q ss_pred hhcccCCcEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHH--cCCEEEEeCCCC
Q 016612 112 RVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHA--HGALLLVDNSIM 179 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~--~~~~li~D~a~~ 179 (386)
....+.+++.++. .|.+++++++++++++|++++|+||||.+++ +++|+++|++ ++++||+||+|.
T Consensus 209 --l~g~~~~~v~v~~~~~~~f~~d~~~l~~~~~~~tkai~l~nP~NPTG~v~s~e~l~~I~~ia~~~~~~l~II~DEvY~ 286 (527)
T PRK09275 209 --LPRYDLEVVHINADEENEWQYPDSELEKLRDPSIKALFLVNPSNPPSVAMSDESLEKIADIVNEKRPDLMIITDDVYG 286 (527)
T ss_pred --HcCCCeEEEEeecCcccCCCCCHHHHHhhcCCCCCEEEEeCCcCCcCCCCCHHHHHHHHHHHHhcCCCcEEEECCCCh
Confidence 2234666676653 2678999998899999999999999999987 7888899965 499999999986
Q ss_pred CCCc--cCCC--CCCccEEEeccccccccCCCceEEEEEEcCh
Q 016612 180 SPVL--SRPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 180 ~~~~--~~~~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
.-.. .+.. ..+..+++.|+||.+ +.+|+|+||++++++
T Consensus 287 ~f~~~~~s~~~~~~~~~I~v~SfSK~f-~mtG~RlG~i~~~~~ 328 (527)
T PRK09275 287 TFVDDFRSLFAVLPYNTILVYSFSKYF-GATGWRLGVIALHED 328 (527)
T ss_pred hhcccccCHHHhCCCCEEEEeehhhhc-cCcHhHHhhhhcCch
Confidence 4221 1111 124689999999999 567899999999875
No 185
>KOG1549 consensus Cysteine desulfurase NFS1 [Amino acid transport and metabolism]
Probab=99.93 E-value=6.5e-25 Score=197.01 Aligned_cols=200 Identities=21% Similarity=0.195 Sum_probs=152.7
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCcc-ccCCCCchHHHHHHHHHhhcCCC-ceEEeCcH-HHHHHHHHH
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYD-YTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALAAVTH 88 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~-y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~g-t~al~~~~~ 88 (386)
+++.+. +..+|+.++.++.+-.-.......+.... |++...+..++.|+.++++.|++ ..|++++| |+++++++.
T Consensus 43 ~~vyld--~~at~p~~~~Vldam~~~~~~~~~nPh~~~y~w~~~~~~E~aR~~VAklInAd~~dIiFts~ATEs~Nlvl~ 120 (428)
T KOG1549|consen 43 RPVYLD--NQATGPMDPRVLDAMLPYLLEYLGNPHSRSYGWKAEDAVEAAREQVAKLINADPSDIVFTSGATESNNLVLK 120 (428)
T ss_pred ccEEEe--cCcCCCCCHHHHHHHHHHHHHhhcCCCccccchhhhHHHHHHHHHHHHHhCCCCCcEEEeCCchHHHHHHHH
Confidence 444444 55577777776654221111111111112 33222234788999999999998 33555555 699986554
Q ss_pred -h-cCCCC----EEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 89 -L-LGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 89 -~-~~~g~----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
. +.++| +|++.+..|++....+ ...+..|++++++|.. |.+++++.++++|+++.+++.+|.+|.+.|
T Consensus 121 ~v~~~~~~~~~k~iitl~~eH~~v~~s~-~~l~~~g~~Vt~lpv~~~~~~d~~~~~~~i~~~T~lv~I~~Vnn~~gv~~P 199 (428)
T KOG1549|consen 121 GVARFFGDKTKKHIITLQTEHPCVLDSC-RALQEEGLEVTYLPVEDSGLVDISKLREAIRSKTRLVSIMHVNNEIGVLQP 199 (428)
T ss_pred HhhccccccccceEEEecccCcchhHHH-HHHHhcCeEEEEeccCccccccHHHHHHhcCCCceEEEEEecccCcccccc
Confidence 2 44566 9999999999988776 4566788999999864 899999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccccCCCceEEEEEEcC
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~ 217 (386)
+++|.++|+++++.+++|.+|+.|... +..++++|+++.|.|||+ ||+| +|++++++
T Consensus 200 v~EI~~icr~~~v~v~~DaAQavG~i~vDV~eln~D~~s~s~HK~y-gp~~--iGaLYvr~ 257 (428)
T KOG1549|consen 200 VKEIVKICREEGVQVHVDAAQAVGKIPVDVQELNADFLSISAHKIY-GPPG--IGALYVRR 257 (428)
T ss_pred HHHHHHHhCcCCcEEEeehhhhcCCccccHHHcCchheeeeccccc-CCCc--ceEEEEcc
Confidence 999999999999999999999999875 667789999999999999 6666 79999985
No 186
>PRK14808 histidinol-phosphate aminotransferase; Provisional
Probab=99.93 E-value=1.1e-24 Score=200.29 Aligned_cols=268 Identities=13% Similarity=0.170 Sum_probs=171.2
Q ss_pred ccCCCCc-hHHHHHHHHHhhcCCCceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 49 YTRSGNP-TRDALESLLAKLDKADRALCFTSGM-AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 49 y~~~g~~-~~~~l~~~l~~~~g~~~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
|...+.+ +++++.+++.+..-.++.|++++|+ +++.+++..+ |.|++++|+|+.+. .+++..|.+++.++.
T Consensus 53 Y~~~~~~~Lr~aia~~~~~~~~~~~~i~it~Ga~~~i~~~~~~~---d~v~v~~P~y~~~~----~~~~~~g~~~~~v~~ 125 (335)
T PRK14808 53 YYDSPDEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF---DRSVFFPPTYSCYR----IFAKAVGAKFLEVPL 125 (335)
T ss_pred CCCCChHHHHHHHHHHhCCCCCCcceEEEcCCHHHHHHHHHHHh---CcEEECCCCHHHHH----HHHHHcCCeEEEecC
Confidence 4444443 4444444444321113566666665 8998666655 67999999999885 666788999999987
Q ss_pred CC---HHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC---ccCC-CCCCccEEEeccc
Q 016612 127 CD---LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV---LSRP-LELGADIVMHSAT 199 (386)
Q Consensus 127 ~d---~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~---~~~~-~~~~~di~~~S~s 199 (386)
++ .+.. .+ .+++++++++||||||.+.+.+++.+++ +++++||+||+|..-. .... ......+++.|+|
T Consensus 126 ~~~~~~~~~--~~-~~~~~i~i~nP~NPTG~~~s~~~l~~l~-~~~~~ii~DE~Y~~f~~~~~~~~~~~~~~vi~~~S~S 201 (335)
T PRK14808 126 TKDLRIPEV--NV-GEGDVVFIPNPNNPTGHVFEREEIERIL-KTGAFVALDEAYYEFHGESYVDLLKKYENLAVIRTFS 201 (335)
T ss_pred CCcCCCChh--Hc-cCCCEEEEeCCCCCCCCCcCHHHHHHHH-hcCCEEEEECchhhhcCCchHHHHHhCCCEEEEEech
Confidence 52 1111 12 3578999999999999999999999998 5799999999986321 1111 1234679999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcce
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKK 276 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~ 276 (386)
|.+ +.+|+|+||+++++ ++.+.+...... .+.+...+.++...++.. ....+...++.+.+.+.+++.
T Consensus 202 K~~-~l~GlRvG~~v~~~-~~~~~l~~~~~~--~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~r~~l~~~L~~~----- 272 (335)
T PRK14808 202 KAF-SLAAQRIGYVVSSE-KFIDAYNRVRLP--FNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREM----- 272 (335)
T ss_pred hhc-cCcccceEEEEeCH-HHHHHHHHhcCC--CCCCHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHC-----
Confidence 999 55689999999874 565555544422 344555555544444322 122223333333344444432
Q ss_pred EecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 277 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 277 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+..++ .+.|+++++.++..+ ...+.+.+..+|+.++. +
T Consensus 273 ----------g~~~~----~~~g~f~~~~l~~~~-~~~~~~~l~~~Gi~V~~--~------------------------- 310 (335)
T PRK14808 273 ----------GYRIT----DSRGNFVFIFMEKEE-KERLLEHLRAKNIAVRS--F------------------------- 310 (335)
T ss_pred ----------CCEEC----CCCCeEEEEeCCCcc-HHHHHHHHHHCCeEEEE--C-------------------------
Confidence 11111 235788888886433 36677778888887652 1
Q ss_pred CCCeEEEEecc-CChHHHHHHHHH
Q 016612 357 TEDLVRISVGI-EDVNDLISDLDK 379 (386)
Q Consensus 357 ~~~~iRis~~~-~~~~~~i~~l~~ 379 (386)
++++|||++. ++++++++.|++
T Consensus 311 -~~~~Risi~~~~~~~~~~~~l~~ 333 (335)
T PRK14808 311 -REGVRITIGKREENDMILKELEV 333 (335)
T ss_pred -CCCeEEecCCHHHHHHHHHHHHh
Confidence 2349999974 888888888764
No 187
>PRK08637 hypothetical protein; Provisional
Probab=99.92 E-value=1.2e-22 Score=191.00 Aligned_cols=296 Identities=15% Similarity=0.156 Sum_probs=179.6
Q ss_pred CCCCccccCC-CCc-hHHHHHHHHHhhcC---CC--ceEEeCcHH-HHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhh
Q 016612 43 ENGPYDYTRS-GNP-TRDALESLLAKLDK---AD--RALCFTSGM-AALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRV 113 (386)
Q Consensus 43 ~~~~~~y~~~-g~~-~~~~l~~~l~~~~g---~~--~~i~~~~gt-~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~ 113 (386)
....+.|++. |.+ +|+++.+++.+..+ .+ +.|++++|+ +++..+ ..++++||.|++++|+|+.+...+
T Consensus 34 ~~~~~~Y~~~~G~~~lr~~ia~~~~~~~~~~~~~~~~~I~it~G~~~al~~~~~~l~~~gd~Vlv~~P~y~~~~~~~--- 110 (388)
T PRK08637 34 PDEIFPYAPPQGIPELRDLWQEKMLRENPSLSGKKMSLPIVTNALTHGLSLVADLFVDQGDTVLLPDHNWGNYKLTF--- 110 (388)
T ss_pred cccccCCCCCCCCHHHHHHHHHHHhccCccccccccceeeEccchHHHHHHHHHHhcCCCCEEEEcCCCCccHHHHH---
Confidence 3456788887 876 78888887766432 12 345566665 888754 557899999999999999886321
Q ss_pred cccCCcEEEEeCC--C----CHHHHHhhhC----CCceEEEEeCCCCCCccccc---HHHHHHHHHH-----cCCEEEEe
Q 016612 114 TPKTGVVVKRVNT--C----DLDEVASAIG----PWTKLVWVESPTNPRQQICD---IRKIAEMAHA-----HGALLLVD 175 (386)
Q Consensus 114 ~~~~g~~~~~v~~--~----d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~---l~~i~~la~~-----~~~~li~D 175 (386)
....|.+++.++. + |++++++.++ +.+.++++++||||||.+++ +++|+++|++ ++++||+|
T Consensus 111 ~~~~g~~vv~v~~~~~~~~~d~~~l~~~~~~~~~~~~~~~~~~~P~NPTG~~~s~~~~~~l~~~~~~~~~~~~~~~iI~D 190 (388)
T PRK08637 111 NTRRGAEIVTYPIFDEDGGFDTDALKEALQAAYNKGKVIVILNFPNNPTGYTPTEKEATAIVEAIKELADAGTKVVAVVD 190 (388)
T ss_pred HHhcCCEEEEecccCCCCcCCHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHhcCCcEEEEec
Confidence 2347888888876 2 6888888775 45567778899999999986 6778887775 89999999
Q ss_pred CCCCCCCcc-----C---C--CCCCcc--EEEeccccccccCCCceEEEEEEcC-----hhHHHHHHHh----hhhcCCC
Q 016612 176 NSIMSPVLS-----R---P--LELGAD--IVMHSATKFIAGHSDVMAGVLAVKG-----ERLAKELYFL----QNAEGSG 234 (386)
Q Consensus 176 ~a~~~~~~~-----~---~--~~~~~d--i~~~S~sK~~~g~~g~~~G~i~~~~-----~~~~~~~~~~----~~~~~~~ 234 (386)
|+|..-.+. + . ...+.. +.+.|+||.++ .+|+|+||++++. +.+.+.+... .......
T Consensus 191 e~Y~~l~~~~~~~~~~~~~~~~~~~~vi~i~~~s~SK~~~-~pGlRlG~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 269 (388)
T PRK08637 191 DAYFGLFYEDSYKESLFAALANLHSNILAVKLDGATKEEF-VWGFRVGFITFGTKAGSSQTVKEALEKKVKGLIRSNISN 269 (388)
T ss_pred ccchhcccCCccchhhHHHhhcccccceEEEeccccccCC-CcccceEEEEEccccCCcHHHHHHHHHHHHHHhhcccCC
Confidence 998632211 0 0 011233 34459999984 5689999999753 4555444321 1112234
Q ss_pred CChhhHHHHHhcCCcHH--HHH----HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC
Q 016612 235 LAPFDCWICLRGVKTMA--LRV----EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 308 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~--~~~----~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (386)
.+...+.++...+..-. ... ..+.+..+.+.+.+++.. +. +++.++ . +..|.++++.+++
T Consensus 270 ~s~~~q~a~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~l~~~~---------~~--~~~~~~--~-~~~g~~~~~~l~~ 335 (388)
T PRK08637 270 GPHPSQSAVLRALNSPEFDKEKQEKFQILKERYEKTKEVLYDGK---------YD--DAWQAY--P-FNSGYFMCLKLKG 335 (388)
T ss_pred CCcHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---------CC--CCcccc--c-ccceEEEEecCCh
Confidence 45555555555543311 111 112222222233333221 00 011111 1 1224556667763
Q ss_pred HHhHHHHHhhc-CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhcC
Q 016612 309 LALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRTG 384 (386)
Q Consensus 309 ~~~~~~l~~~l-~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~~ 384 (386)
. ...++.+.+ +..|+.+..+ .++++||+++. +++++.+++|.++++++
T Consensus 336 ~-~~~~l~~~l~~~~gv~~~~~---------------------------~~~~iRi~~~~~~~~~i~~~~~~l~~~~~~~ 387 (388)
T PRK08637 336 V-DAEELRVHLLEKYGIGTIAL---------------------------NETDLRIAFSCVEEEDIPELFDSIYKAIKDL 387 (388)
T ss_pred H-HHHHHHHHHhhhcceEEEec---------------------------cCCceEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 2 356676666 3556643210 24569999974 77888888888888753
No 188
>PLN02672 methionine S-methyltransferase
Probab=99.92 E-value=2.1e-23 Score=210.24 Aligned_cols=283 Identities=13% Similarity=0.126 Sum_probs=185.3
Q ss_pred CCc-hHHHHHHHHHhhcCCC----ceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 53 GNP-TRDALESLLAKLDKAD----RALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~~----~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
|.+ +++++.+++++.+|.+ +.|++++|+ +++. ++.++++|||.|+++.|+|+.+. ..++..|.+++.++
T Consensus 731 g~pdlr~aLa~~la~~~Gv~~d~~e~IIvt~Gs~elL~lll~aLl~pGD~VLVp~PtY~~Y~----~~a~~~Ga~vv~Vp 806 (1082)
T PLN02672 731 SETDPRPSILQFIKSNYGFPTDSCTEFVYGDTSLALFNKLVLCCVQEGGTLCFPAGSNGTYV----SAAKFLKANFRRIP 806 (1082)
T ss_pred CChHHHHHHHHHHHHHhCcCCCCCCEEEEeCCHHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEe
Confidence 444 6899999999988775 267788887 6676 55778999999999999999886 55667899999888
Q ss_pred CC-------CHHHHHhhhCC-CceEEEEeCCC-CCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-CC-----C
Q 016612 126 TC-------DLDEVASAIGP-WTKLVWVESPT-NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-RP-----L 187 (386)
Q Consensus 126 ~~-------d~~~l~~~~~~-~~~~v~~~~~~-nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-~~-----~ 187 (386)
++ |.+++++++++ +.+++++++|+ ||||.+++ +++|.++|++||++||+||+|+.-.+. .. .
T Consensus 807 l~~e~gf~lD~d~Le~al~~~~~~~I~L~nPnhNPTG~v~S~eeLe~Llela~k~di~VIsDEaYsdL~Fd~~~~s~~sl 886 (1082)
T PLN02672 807 TKSSDGFKLTAKTLASTLETVKKPWVYISGPTINPTGLLYSNSEIEEILSVCAKYGARVIIDTSFSGLEYDTSGWGGWDL 886 (1082)
T ss_pred cccccCCCCCHHHHHHHhccCCCCEEEEECcCCCCcCccCCHHHHHHHHHHHHHcCCEEEEeCCCCccccCCCCCcccch
Confidence 63 67889998875 45689999997 99999985 788899999999999999999622211 00 0
Q ss_pred -------C----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCC-CChhhHHHHHhcC--------
Q 016612 188 -------E----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-LAPFDCWICLRGV-------- 247 (386)
Q Consensus 188 -------~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-------- 247 (386)
. ....++++|+||.+ +.+|+|+||++++++.+.+.+.......... .+......++..+
T Consensus 887 ~s~l~~~~~~sks~nVIvL~SfSKkf-~lpGLRIGylIap~~eLi~~l~~~~~~s~~~~~~q~Aaaaalall~~~~~~~~ 965 (1082)
T PLN02672 887 KSILSRLKSSNPSFAVALLGGLSTEL-LSGGHEFGFLALNDSVLIDAFHSAPGLSRPHSTLKYTIKKLLGLKNQKSSDLL 965 (1082)
T ss_pred hhHHHHhccccCCceEEEEeCcHHhh-ccHHHHheeEEeCCHHHHHHHHHhhhhcCCCcHHHHHHHHHHHHHhccCcHHH
Confidence 0 12568999999998 5678999999997666666665443222221 1122222222111
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-eCC-----------------H
Q 016612 248 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGS-----------------L 309 (386)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~-----------------~ 309 (386)
..+....+.+.++.+.+.+.|++.. + .+. +..|+++.|. +.. .
T Consensus 966 ~~l~e~r~~Lk~rRd~L~e~L~~~G---------i------~v~----~PeGGFfLwl~l~~~l~~~~~~~~~~~~~~~~ 1026 (1082)
T PLN02672 966 DGVAEQKKILKSRAERLKETLEACG---------W------DVL----EPQGGISMVAKPSAYLGKTVKLKSIDGDTGIK 1026 (1082)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCC---------C------eEe----cCCcEEEEEEEccccccccccccccccccccC
Confidence 0112223334555555666665431 1 111 2234444443 210 1
Q ss_pred HhHHHHHhhcCc-ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 310 ALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 310 ~~~~~l~~~l~~-~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
.....+.+.+.. .|+.+.+|..+ | .++++||+++. +.+++.+++|++.++
T Consensus 1027 lds~efae~LLee~GVaV~PGs~F----------------------G-~~g~~RIsfa~~~e~LeeALerL~kf~~ 1079 (1082)
T PLN02672 1027 LDSSNIREAILKSTGLCINSSSWT----------------------G-IPGYCRFSFALEDSEFDRALKAIARFKE 1079 (1082)
T ss_pred CCHHHHHHHHHHcCCEEEecCccc----------------------C-CCCeEEEEecCCHHHHHHHHHHHHHHHH
Confidence 124556665543 47877777541 1 25789999984 567777777776554
No 189
>PLN02721 threonine aldolase
Probab=99.92 E-value=2.8e-23 Score=193.26 Aligned_cols=281 Identities=21% Similarity=0.218 Sum_probs=183.9
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcC-CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLG-TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~-~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
|...++++.+++++|.+..+++++|+++.. ++..++. +||+|++++|+|.+..... ..+...|.+++.++.+
T Consensus 40 ~~~~~l~~~la~~~~~~~~~~~~~Gs~a~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~~ 118 (353)
T PLN02721 40 PTALRLEEEMAKIFGKEAALFVPSGTMGNLISVLVHCDVRGSEVILGDNSHIHLYENG-GISTLGGVHPRTVKNNEDGTM 118 (353)
T ss_pred HHHHHHHHHHHHHhCCceeEEecCccHHHHHHHHHHccCCCCeEEEcCccceehhccc-chhhhcCceeEecCCCcCCCc
Confidence 457899999999999988889999997654 5555676 9999999999986553210 1456788999888753
Q ss_pred CHHHHHhhhC-------CCceEEEEeC-CCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc---c-CC--CCCC
Q 016612 128 DLDEVASAIG-------PWTKLVWVES-PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL---S-RP--LELG 190 (386)
Q Consensus 128 d~~~l~~~~~-------~~~~~v~~~~-~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~---~-~~--~~~~ 190 (386)
|++++++.++ +++++|++++ ++||+|.+.| +++|.++|+++|+++|+|+++..+.. . ++ ...+
T Consensus 119 d~~~l~~~i~~~~~~~~~~~~~v~l~~~~~np~G~~~~~~~l~~l~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~ 198 (353)
T PLN02721 119 DLDAIEAAIRPKGDDHFPTTRLICLENTHANCGGRCLSVEYTDKVGELAKRHGLKLHIDGARIFNASVALGVPVHRLVKA 198 (353)
T ss_pred CHHHHHHHHHhccCCCCCcceEEEEeccccccCCccccHHHHHHHHHHHHHcCCEEEEEchhhhcchhhhCCCHHHHhhh
Confidence 8899999987 5899999976 5778999876 78999999999999999999764321 1 11 1236
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCCh--hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP--FDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 268 (386)
.|.++.|+||+++++. +++++.+ +++.+.+.......+..... ..+.+...+++....+.++..++.+.+.+.|
T Consensus 199 ~d~~~~s~sK~l~~~~---G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L 274 (353)
T PLN02721 199 ADSVSVCLSKGLGAPV---GSVIVGS-KSFIRKAKRLRKTLGGGMRQVGVLAAAALVALQENVPKLEDDHKKAKLLAEGL 274 (353)
T ss_pred CCEEEEecccccCCce---eeEEecC-HHHHHhHHHHHHhcCCCeehhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7888999999996542 3445554 55655554444433222221 1122222333333334444445556666666
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcCcceeccCCCCccccccccccccCCCC
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 346 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~ 346 (386)
++.+.+ .+... ...++++++.++.. ...+.+.+.+...|+.+.++.
T Consensus 275 ~~~~~~--------------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~v~~~~---------------- 322 (353)
T PLN02721 275 NQIKGL--------------RVNVA--AVETNIVYFDITDGSRITAEKLCKSLEEHGVLLMPGN---------------- 322 (353)
T ss_pred HhCCCc--------------EEecC--CccceEEEEEccCCccccHHHHHHHHHhCCcEEecCC----------------
Confidence 654321 00000 12356788877542 246678888888888766542
Q ss_pred CHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 347 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
++++|++++. ++++++++.|++++..
T Consensus 323 -----------~~~lR~~~~~~~~~~~i~~~~~~l~~~~~~ 352 (353)
T PLN02721 323 -----------SSRIRVVTHHQISDSDVQYTLSCFQQAALT 352 (353)
T ss_pred -----------CceEEEEecCcCCHHHHHHHHHHHHHHhhc
Confidence 3459999963 6666667766666543
No 190
>KOG0256 consensus 1-aminocyclopropane-1-carboxylate synthase, and related proteins [Signal transduction mechanisms]
Probab=99.92 E-value=9.9e-23 Score=179.22 Aligned_cols=297 Identities=15% Similarity=0.186 Sum_probs=197.2
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC------CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA------DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~------~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
-.|.++ |.+ .++++.+.+.+..|. ++.++++++|++..+ ...+.+|||..|+|.|.|++.. +.+.-+.
T Consensus 115 a~fqdy~Gl~~frqa~A~Fm~~~r~~~v~fdP~~~Vv~~G~T~ane~l~fcLadpgdafLvPtPyY~gfd---rdl~~rT 191 (471)
T KOG0256|consen 115 AMFQDYHGLPSFRQAVAEFMERARGNRVKFDPERVVVTNGATSANETLMFCLADPGDAFLVPTPYYPGFD---RDLRWRT 191 (471)
T ss_pred hhcccccCchHHHHHHHHHHHHHhCCCCccCccceEEecccchhhHHHHHHhcCCCceeeecCCCCCccc---ccceecc
Confidence 357777 887 799999999887543 356666667788764 4557899999999999999986 3566789
Q ss_pred CcEEEEeCCC-------CHHHHHhhhC------CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 118 GVVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
|++++.+.+. +.+.+|+++. .+++.|++++|+||.|..++ +..+.++|.++++.+|+||+|+..
T Consensus 192 gveivpv~c~Ss~~f~itv~alE~A~~~A~~~~~kVkGvlitNPsNPLG~~~~~e~L~~ll~Fa~~kniHvI~DEIya~s 271 (471)
T KOG0256|consen 192 GVEIVPVHCSSSNGFQITVEALEAALNQARKLGLKVKGVLITNPSNPLGTTLSPEELISLLNFASRKNIHVISDEIYAGS 271 (471)
T ss_pred CceEEEEEeecCCCccccHHHHHHHHHHHHHhCCceeEEEEeCCCCCCCCccCHHHHHHHHHHHhhcceEEEeehhhccc
Confidence 9999998864 5778887764 48899999999999999986 667888889999999999999865
Q ss_pred CccCCC-------------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC
Q 016612 182 VLSRPL-------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK 248 (386)
Q Consensus 182 ~~~~~~-------------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (386)
++.... ..+..-++.|+||-+ |.+|+|.|+++..++.+....+..... ..++...++.+...+.
T Consensus 272 VF~~~~F~Sv~ev~~~~~~~~~rvHivyslSKD~-GlpGfRvGviYS~ne~VvsaA~kmssf--~~vSs~tQ~~la~LLS 348 (471)
T KOG0256|consen 272 VFDKSEFRSVLEVRKDPHLDPDRVHIVYSLSKDF-GLPGFRVGVIYSNNEDVVSAATKMSSF--GLVSSQTQYLLASLLS 348 (471)
T ss_pred ccCccCceEHHHHhhccccCCCcEEEEEEecccc-CCCceEEEEEEecChHHHHHHHHHhhc--cCCcHHHHHHHHHHhc
Confidence 543210 224457888999999 678999999999988887655554443 3456666766665555
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-e----CC--HHhHHHHHhhcCc
Q 016612 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-T----GS--LALSKHVVETTKY 321 (386)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~----~~--~~~~~~l~~~l~~ 321 (386)
.-......+.++.++++..-+. +..+|+.+ |+.. .+..+++++|. + .. -+....+.+.+-.
T Consensus 349 D~~f~~~yl~en~~Rl~~rh~~-------~~~gLk~l-gI~c----l~s~AGlF~wvDlr~lL~s~tfe~El~Lw~~i~~ 416 (471)
T KOG0256|consen 349 DEEFTREYLRENNKRLRIRHRY-------IVEGLKAL-GIPC----LKSNAGLFCWVDLRKLLTSLTFEGELELWERILD 416 (471)
T ss_pred hHHHHHHHHHHHHHHHHHHHHH-------HHhhHHhc-CCce----eecCCeeEEEEEhHHhcCcCChHHHHHHHHHHHH
Confidence 4333333444555544433222 11222211 1111 13345666654 2 11 1111223333322
Q ss_pred -ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHH-HHHHHHHHHh
Q 016612 322 -FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVND-LISDLDKALR 382 (386)
Q Consensus 322 -~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~-~i~~l~~~l~ 382 (386)
.++.+++|..+- ...+||+|++|.- +++.+ .++++++.+.
T Consensus 417 ~vklnlSpG~s~~---------------------C~EpGWFRvcFAn~~~~t~~~am~Ri~~~~~ 460 (471)
T KOG0256|consen 417 NVKLNLSPGSSCH---------------------CHEPGWFRVCFANMSEETLEVAMRRLKQFLD 460 (471)
T ss_pred hhccccCCCCcce---------------------ecCCCeEEEEeccCCHHHHHHHHHHHHHHHH
Confidence 266778887521 1247999999963 44444 6777777664
No 191
>TIGR03801 asp_4_decarbox aspartate 4-decarboxylase. This enzyme, aspartate 4-decarboxylase (EC 4.1.1.12), removes the side-chain carboxylate from L-aspartate, converting it to L-alanine plus carbon dioxide. It is a PLP-dependent enzyme, homologous to aspartate aminotransferase (EC 2.6.1.1).
Probab=99.92 E-value=4.3e-23 Score=196.22 Aligned_cols=169 Identities=19% Similarity=0.257 Sum_probs=121.6
Q ss_pred cccC-CCC-chHHHHH-HHHHhhcC----CC---ceEEeCcHHHHHH-HHHH-----hcCCCCEEEecCCCCCcHHHHHh
Q 016612 48 DYTR-SGN-PTRDALE-SLLAKLDK----AD---RALCFTSGMAALA-AVTH-----LLGTGEEIVAGDDLYGGTDRLLS 111 (386)
Q Consensus 48 ~y~~-~g~-~~~~~l~-~~l~~~~g----~~---~~i~~~~gt~al~-~~~~-----~~~~g~~Vlv~~~~~~~~~~~~~ 111 (386)
.|.. .|. ++++++. +.+.+.++ .+ +.+++.++++|+. ++.+ +++|||+|+++.|.|+.+.....
T Consensus 123 ~Y~~p~g~~~~~e~iv~~y~~~~~~~~~~~~~~~~V~it~Gat~al~~~~~~l~~~~ll~pGD~Vlv~~P~y~~y~~~~~ 202 (521)
T TIGR03801 123 NYPVPDRMLPHSEKIVHQYLIQEMCGNKPPPGEFDLFAVEGGTAAMCYIFDSLKANELLKKGDKIALMTPIFTPYLEIPE 202 (521)
T ss_pred CCCCCCCCHHHHHHHHHHHHHhhccCCCCCCCcCeEEEeCCHHHHHHHHHHHHhHhhcCCCCCEEEEeCCCcHHHHHHHH
Confidence 4654 354 4666665 55555432 12 3444555568886 4443 68999999999999999864321
Q ss_pred hhcccCCcEEEEeCCC------------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHc--CCEEEE
Q 016612 112 RVTPKTGVVVKRVNTC------------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAH--GALLLV 174 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~~------------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~--~~~li~ 174 (386)
....|.+++.++.+ |.++++++++++++++++++|+||||.+++ +++|+++|+++ +++||+
T Consensus 203 --l~~~g~~vv~i~~~~~~~~g~~~~~~d~~~l~~~~~~~~kai~l~nP~NPTG~vls~e~l~~I~~ia~~~~~~l~II~ 280 (521)
T TIGR03801 203 --LPRYDFEVVRIKADEMTEDGTHTWQYPDKELEKLRDPSIKALFVVNPSNPPSVAMSDESIEKIVDIVANDRPDLMILT 280 (521)
T ss_pred --HhcCCcEEEEeecccccccccccCCCCHHHHHHhcCCCCcEEEEeCCCCCCCCCCCHHHHHHHHHHHHhcCCCeEEEE
Confidence 23457777766542 567899888889999999999999999987 77888899986 999999
Q ss_pred eCCCCCCCc--cCCCC--CCccEEEeccccccccCCCceEEEEEEcChh
Q 016612 175 DNSIMSPVL--SRPLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 175 D~a~~~~~~--~~~~~--~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~ 219 (386)
||+|+.-.. .+... .+..+++.|+||.+ |.+|+|+||++++++.
T Consensus 281 DEvY~~f~~~~~sl~~~~~~~vI~v~SfSK~f-g~~G~RlG~i~~~~~~ 328 (521)
T TIGR03801 281 DDVYGTFVDDFRSLFAELPYNTIGVYSFSKYF-GATGWRLGTIALHKDN 328 (521)
T ss_pred CCCchhhcccccchhhhCCCCEEEEEcchhhc-cCchhhhhhhhcCchH
Confidence 999873221 11111 24679999999999 5678999999998653
No 192
>TIGR02326 transamin_PhnW 2-aminoethylphosphonate--pyruvate transaminase. Members of this family are 2-aminoethylphosphonate--pyruvate transaminase. This enzyme acts on the most common type of naturally occurring phosphonate. It interconverts 2-aminoethylphosphonate plus pyruvate with 2-phosphonoacetaldehyde plus alanine. The enzyme phosphonoacetaldehyde hydrolase (EC 3.11.1.1), usually encoded by an adjacent gene, then cleaves the C-P bond of phosphonoacetaldehyde, adding water to yield acetaldehyde plus inorganic phosphate. Species with this pathway generally have an identified phosphonate ABC transporter but do not also have the multisubunit C-P lysase complex as found in Escherichia coli.
Probab=99.92 E-value=1.7e-23 Score=195.33 Aligned_cols=282 Identities=19% Similarity=0.194 Sum_probs=183.5
Q ss_pred hHHHHHHHHHhhcCCCc----eEEeCcHHHHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 56 TRDALESLLAKLDKADR----ALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~----~i~~~~gt~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
..+++++.+++++|.++ .+++++||++++++ .+++.+||.+++..+.+++.. +..+++..|.+++.++.+
T Consensus 36 ~~~~~r~~la~l~~~~~~~~~i~~t~~~t~al~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~a~~~g~~~~~v~~~~~~ 113 (363)
T TIGR02326 36 VVEQIRQQLLALATAEEGYTSVLLQGSGTFAVEAVIGSAVPKDGKLLVVINGAYGAR--IVQIAEYLGIPHHVVDTGEVE 113 (363)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCCHHHHHHHHHhcCCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCCC
Confidence 67889999999999862 44556778999754 567788888776555544331 235567788888887763
Q ss_pred --CHHHHHhhhCC--CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 --DLDEVASAIGP--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 --d~~~l~~~~~~--~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|++++++.++. +++++.+.+++||||...|+++|.++|+++|+++++|++++.+..+ +...++.|++++|+||++
T Consensus 114 ~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~i~~I~~l~~~~g~~livD~~~~~g~~~~~~~~~~~D~~~~s~~K~l 193 (363)
T TIGR02326 114 PPDVVEVEAILAADPAITHIALVHCETTTGILNPIEAVAKLAHRHGKVTIVDAMSSFGGIPIDIAELHIDYLISSANKCI 193 (363)
T ss_pred CCCHHHHHHHHhhCCCccEEEEEeecCCccccCcHHHHHHHHHHcCCEEEEEccccccCcccchhhcCccEEEecCcccc
Confidence 78999998873 5678889999999999999999999999999999999999877654 344568999999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHH---------------hhhhcC-C--CCChhhHHHHHhcCCc------HHHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYF---------------LQNAEG-S--GLAPFDCWICLRGVKT------MALRVEKQQ 258 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~---------------~~~~~~-~--~~~~~~~~~~~~~~~~------~~~~~~~~~ 258 (386)
+||+| .|+++++++.+.+ +.. .....+ . ..+......+..+++. +..+.++..
T Consensus 194 ~~p~G--~G~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ft~~~~~~~al~~al~~l~~~g~~~~~~~~~~ 270 (363)
T TIGR02326 194 QGVPG--FGFVIARQAELAA-CKGNARSLSLDLYDQWRCMEDNHGKWRFTSPTHVVHAFAQALLELEKEGGVAARHQRYQ 270 (363)
T ss_pred ccCCc--ceEEEECHHHHHH-hhcCCCceeecHHHHHHHHhccCCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHH
Confidence 88887 6999998654432 211 000000 0 1122222222222222 223344455
Q ss_pred HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCH--HhHHHHHhhcCcceeccCCCCccccc
Q 016612 259 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLI 335 (386)
Q Consensus 259 ~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~ 335 (386)
+....+.+.+++.. +. ++.. +..+++ +.++.+++. .....+.+.+..+|+.+++|...
T Consensus 271 ~~~~~l~~~L~~~g---------~~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gi~v~~g~~~--- 331 (363)
T TIGR02326 271 QNQKTLVAGMRALG---------FE------PLLD-DEIQSPIITSFYSPEDPDYRFADFYQRLKEQGFVIYPGKVS--- 331 (363)
T ss_pred HHHHHHHHHHHHcC---------Ce------eccC-cccCCceEEEEECCCCCCCCHHHHHHHHHHCCEEEECCcCC---
Confidence 55555555555432 11 1100 011233 356666542 23556777777778887766431
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEe-c---cCChHHHHHHHHHHHh
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISV-G---IEDVNDLISDLDKALR 382 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~---~~~~~~~i~~l~~~l~ 382 (386)
.+++||||+ + .++++.+++.|+++|.
T Consensus 332 ---------------------~~~~iRi~~~~~~~~edv~~~l~~l~~~l~ 361 (363)
T TIGR02326 332 ---------------------QVDCFRIGNIGEVDAADITRLLTAIGKAMY 361 (363)
T ss_pred ---------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHhC
Confidence 235699996 3 3777777777776653
No 193
>cd00616 AHBA_syn 3-amino-5-hydroxybenzoic acid synthase family (AHBA_syn). AHBA_syn family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The members of this CD are involved in various biosynthetic pathways for secondary metabolites. Some well studied proteins in this CD are AHBA_synthase, protein product of pleiotropic regulatory gene degT, Arnb aminotransferase and pilin glycosylation protein. The prototype of this family, the AHBA_synthase, is a dimeric PLP dependent enzyme. AHBA_syn is the terminal enzyme of 3-amino-5-hydroxybenzoic acid (AHBA) formation which is involved in the biosynthesis of ansamycin antibiotics, including rifamycin B. Some members of this CD are involved in 4-amino-6-deoxy-monosaccharide D-perosamine synthesis. Perosamine is an important element in the glycosylation of several cell products, such as antibiotics and lipopolysaccharides of gram-positive and gram-negative bacteria. The pilin glycosylation protein
Probab=99.92 E-value=5.3e-23 Score=191.31 Aligned_cols=300 Identities=20% Similarity=0.213 Sum_probs=197.2
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+...++++.+++++|.++.+++++|++|+.. +..+ +++||+|+++.+.|.++... +...|.+++.++.+
T Consensus 17 ~~~~~~~~~~la~~~~~~~~~~~~sgt~al~~~l~~l~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 92 (352)
T cd00616 17 GPKVREFEKAFAEYLGVKYAVAVSSGTAALHLALRALGIGPGDEVIVPSFTFVATANA----ILLLGATPVFVDIDPDTY 92 (352)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHHHH----HHHcCCeEEEEecCCCcC
Confidence 36788999999999999889999999999874 4445 58999999999999888643 44678888887643
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCC--CCCccEEEeccc--cc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KF 201 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~--~~~~di~~~S~s--K~ 201 (386)
|++++++.+++++++|++++ ++|...|+++|.++|+++|+++|+|++++.+...... ....|+.++|++ |+
T Consensus 93 ~~d~~~l~~~i~~~~~~v~~~~---~~G~~~~~~~i~~l~~~~~i~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~ 169 (352)
T cd00616 93 NIDPELIEAAITPRTKAIIPVH---LYGNPADMDAIMAIAKRHGLPVIEDAAQALGATYKGRKVGTFGDAGAFSFHPTKN 169 (352)
T ss_pred CcCHHHHHHhcCcCCeEEEEEC---CCCCcCCHHHHHHHHHHcCCeEEEECCCCCCCeECCEEcccCcceeEEcCCCCCC
Confidence 78999999988999999764 6899999999999999999999999999877653221 223588888876 99
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhc---------------CCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAE---------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 266 (386)
++++ .+|+++++++++.+.++...... ...++...+++....+..+....++..++.+.+.+
T Consensus 170 ~~~~---~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~ 246 (352)
T cd00616 170 LTTG---EGGAVVTNDEELAERARLLRNHGRDRDRFKYEHEILGYNYRLSEIQAAIGLAQLEKLDEIIARRREIAERYKE 246 (352)
T ss_pred Cccc---CceEEEECCHHHHHHHHHHHHcCCCCCCCccccceeeeccCcCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 9543 36888887766666555443221 12234444444444444444445555566666666
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhcc--CCCCceEEEEeCC--HHhHHHHHhhcCcceeccCCCCccccccccccc-
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQA--KGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFM- 341 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~--~~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~- 341 (386)
.|.+.+ ++.++...+ ....+++.+.+++ ......+.+.|...|+.++.... .....+...
T Consensus 247 ~L~~~~--------------g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~L~~~gI~~~~~~~-~~~~~~~~~~ 311 (352)
T cd00616 247 LLADLP--------------GIRLPDVPPGVKHSYHLYVIRLDPEAGESRDELIEALKEAGIETRVHYP-PLHHQPPYKK 311 (352)
T ss_pred HhcCCC--------------CccCCCCCCCCceeeEEEEEEECCcCCCCHHHHHHHHHHCCCCeeeecC-ccccCHhhhh
Confidence 665443 222221111 1234677777763 34566777777777774432111 000000000
Q ss_pred ----cCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 342 ----SHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 342 ----~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
.....+... .+..+.+|++++...+++.++.+.++|+
T Consensus 312 ~~~~~~~~~~~a~----~~~~~~l~l~~~~~~t~~di~~i~~~l~ 352 (352)
T cd00616 312 LLGYPPGDLPNAE----DLAERVLSLPLHPSLTEEEIDRVIEALR 352 (352)
T ss_pred ccCCCcCCChHHH----HHHhCeEEccCCCCCCHHHHHHHHHHhC
Confidence 000111110 1123679999999888888888888774
No 194
>TIGR02379 ECA_wecE TDP-4-keto-6-deoxy-D-glucose transaminase. This family consists of TDP-4-keto-6-deoxy-D-glucose transaminases, the WecE (formerly RffA) protein of enterobacterial common antigen (ECA) biosynthesis, from enterobacteria. It also includes closely matching sequence from species not expected to make ECA, but which contain other genes for the biosynthesis of TDP-4-keto-6-deoxy-D-Glc, an intermediate in the biosynthesis of other compounds as well and the substrate of WecA. This family belongs to the DegT/DnrJ/EryC1/StrS aminotransferase family (pfam01041).
Probab=99.92 E-value=1.1e-22 Score=189.24 Aligned_cols=257 Identities=16% Similarity=0.141 Sum_probs=179.5
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
+.++++++++++++|.+..++++||++|+.+ +.++ ++|||+|++++++|.++.. .+...|++++.++.+
T Consensus 31 ~~~~~~e~~la~~~g~~~~v~~~sgt~aL~~~l~al~~~pGd~Viv~~~t~~~~~~----~~~~~G~~~v~vd~d~~~~~ 106 (376)
T TIGR02379 31 PFSRRCETWLENRTGTKKALLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTAN----AFVLRGAKIVFVDIRPDTMN 106 (376)
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHH----HHHHcCCEEEEEecCCCcCC
Confidence 5899999999999999999999999999974 4555 7899999999999988863 334678999998854
Q ss_pred -CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCC--ccEEEecccc--cc
Q 016612 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSATK--FI 202 (386)
Q Consensus 128 -d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~--~di~~~S~sK--~~ 202 (386)
|++++++++++++++|+ |+|++|...++++|.++|+++|++||+|++++.+...+....+ .|+.++|+++ .+
T Consensus 107 ~d~~~le~~i~~~tk~Ii---p~~~~G~~~d~~~I~~la~~~~i~vIeDaa~~~g~~~~~~~~g~~~~~~~fSf~~~K~l 183 (376)
T TIGR02379 107 IDETLIESAITHRTKAIV---PVHYAGVACDMDTIMALANKHQLFVIEDAAQGVMSTYKGRALGSIGHLGTFSFHETKNY 183 (376)
T ss_pred CCHHHHHHhcCcCceEEE---EeCCCCCccCHHHHHHHHHHCCCEEEEECccccCCccCCcccCCCCCEEEEeCCCCCcC
Confidence 78899999999999997 6678999999999999999999999999999877533222233 3778888655 44
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhcC---------------------CCCChhhHHHHHhcCCcHHHHHHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEG---------------------SGLAPFDCWICLRGVKTMALRVEKQQDNA 261 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (386)
. +|.++|+++++++++.+.++.+...+. ..++..+++.....++.+....++..+++
T Consensus 184 ~--~g~~gG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~n~~~~~~~Aa~g~~qL~~l~~~~~~r~~~~ 261 (376)
T TIGR02379 184 T--SGGEGGALLINDQAFIERAEIIREKGTNRSQFFRGEVDKYTWRDIGSSYLPSELQAAYLWAQLEQADRINQDRLATW 261 (376)
T ss_pred c--ccCCceEEEECCHHHHHHHHHHHHhCCCCccccccCCCcceeeeecccCCccHHHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3 233589999988888777766554221 12334555555566666666666666666
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCC
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFG 329 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G 329 (386)
+...+.|...........+..+ ++. .....++++.++.....+++.+.|+..||..+.+
T Consensus 262 ~~y~~~L~~~~~~~~~~~~~~~--~~~-------~~~~~~~~i~~~~~~~r~~l~~~L~~~gI~~~~~ 320 (376)
T TIGR02379 262 QLYQDALKPLEEKGIIELPSIP--NGC-------QHNAHMFYIKLKDEDDRNELIKYLKEQEIMAVFH 320 (376)
T ss_pred HHHHHHhccCCcCCeeeCCCCC--CCC-------eeeeEEEEEEECCcCCHHHHHHHHHHCCCCcccc
Confidence 6666666543210001111111 000 0111345566654334678888888889886643
No 195
>PLN02822 serine palmitoyltransferase
Probab=99.92 E-value=5.3e-23 Score=196.79 Aligned_cols=325 Identities=14% Similarity=0.160 Sum_probs=204.9
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccC----CCC-chHHHHHHHHHhhcCCCceEEeCcHHHHHH-
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTR----SGN-PTRDALESLLAKLDKADRALCFTSGMAALA- 84 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~----~g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~- 84 (386)
...++++ ++++.|...+|........ .+. ..+.+|+. +|. +...++++.++++++.++.+++++|..++.
T Consensus 109 ~~~id~~-s~~~lgl~~~~~i~ea~~~--al~-~~G~g~~g~r~~yg~~~~~~~Lee~La~~~~~~~~i~~s~G~~a~~s 184 (481)
T PLN02822 109 KDVVNFA-SANYLGLIGNEKIKESCTS--ALE-KYGVGSCGPRGFYGTIDVHLDCETKIAKFLGTPDSILYSYGLSTIFS 184 (481)
T ss_pred ceEEEeE-CCCcCCCCCCHHHHHHHHH--HHH-HhCCCCcccCccccCHHHHHHHHHHHHHHhCCCCEEEECCHHHHHHH
Confidence 3567888 6777777666644321111 111 21223332 133 468999999999999888888888876654
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC---------CCc-eEEEEeCCCCCCcc
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---------PWT-KLVWVESPTNPRQQ 154 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~---------~~~-~~v~~~~~~nptG~ 154 (386)
++.+++++||.|++....|.++. ..+...+.+++.++.+|.++++..+. +++ ++|+++++++++|.
T Consensus 185 ai~a~~~~gd~Ii~d~~~H~s~~----~~~~ls~~~~~~~~~nd~~~l~~~l~~~~~~~~~~~~~~~~Ivve~i~~~~G~ 260 (481)
T PLN02822 185 VIPAFCKKGDIIVADEGVHWGIQ----NGLYLSRSTIVYFKHNDMESLRNTLEKLTAENKRKKKLRRYIVVEAIYQNSGQ 260 (481)
T ss_pred HHHHhCCCCCEEEEeCCccHHHH----HHHHHcCCeEEEECCCCHHHHHHHHHHHhhhhcccCCCcEEEEEecCCCCCCC
Confidence 66778999999998888776664 23345577889998888877766553 234 79999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCCCCCCccCC-------C---CCCccEEEeccccccccCCCceEEEEEEcChhHHHHH
Q 016612 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-------L---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (386)
Q Consensus 155 ~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-------~---~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~ 224 (386)
+.|+++|.++|++||+++|+||+|+.+.+... . ....|++++|++|.++ .. +|+++++ +++.+.+
T Consensus 261 i~~L~~i~~l~~k~~~~LIvDEa~s~gvlG~~G~G~~e~~~v~~~~~dii~~s~sKalg-~~---GG~i~g~-~~ii~~~ 335 (481)
T PLN02822 261 IAPLDEIVRLKEKYRFRVLLDESNSFGVLGKSGRGLSEHFGVPIEKIDIITAAMGHALA-TE---GGFCTGS-ARVVDHQ 335 (481)
T ss_pred ccCHHHHHHHHHHcCCEEEEECCccccccCCCCCChHHHcCCCCCCCeEEEecchhhhh-hC---CeEEEcC-HHHHHHH
Confidence 99999999999999999999999986654311 1 1257899999999995 34 4898886 4455544
Q ss_pred HHhhh--hcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC
Q 016612 225 YFLQN--AEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 299 (386)
Q Consensus 225 ~~~~~--~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 299 (386)
+.... ..+..+++..+.++..+++.+ ....+++.++.+.+.+.+++.. +..+. ....+
T Consensus 336 ~~~~~~~~fsa~lPp~~~~Aa~~aL~~l~~~~~~~~~l~~~~~~l~~~L~~~~--------------g~~~~---~~~~s 398 (481)
T PLN02822 336 RLSSSGYVFSASLPPYLASAAITAIDVLEDNPSVLAKLKENIALLHKGLSDIP--------------GLSIG---SNTLS 398 (481)
T ss_pred HhcCCceeeccccCHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHhcC--------------CcccC---CCCCC
Confidence 43222 222333444444444444322 2334445555555555555432 11111 12246
Q ss_pred ceEEEEeCCH--------HhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---
Q 016612 300 SVLSFLTGSL--------ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--- 367 (386)
Q Consensus 300 ~~~~~~~~~~--------~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--- 367 (386)
+++.+.+++. .....+.+.+. ..|+.+.++.. |.... +..+..+|++++.
T Consensus 399 pi~~l~l~~~~~~~~~~~~~~~~~~~~Ll~e~GV~v~~~~~------~~~~~------------~~~~~~lRi~is~~~t 460 (481)
T PLN02822 399 PIVFLHLEKSTGSAKEDLSLLEHIADRMLKEDSVLVVVSKR------STLDK------------CRLPVGIRLFVSAGHT 460 (481)
T ss_pred CEEEEEeCCCcccccchHHHHHHHHHHHHhcCCEEEEeeCC------CCcCC------------CCCCCcEEEEECCCCC
Confidence 7777777431 22456777764 66887665432 10000 0013469999874
Q ss_pred -CChHHHHHHHHHHHhc
Q 016612 368 -EDVNDLISDLDKALRT 383 (386)
Q Consensus 368 -~~~~~~i~~l~~~l~~ 383 (386)
++++++++.|++++++
T Consensus 461 ~edI~~~~~~l~~~~~~ 477 (481)
T PLN02822 461 ESDILKASESLKRVAAS 477 (481)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 6666666777666654
No 196
>TIGR01437 selA_rel uncharacterized pyridoxal phosphate-dependent enzyme. This model describes a protein related to a number of pyridoxal phosphate-dependent enzymes, and in particular to selenocysteine synthase (SelA), which converts Ser to selenocysteine on its tRNA. While resembling SelA, this protein is found only in species that have a better candidate SelA or else lack the other genes (selB, selC, and selD) required for selenocysteine incorporation.
Probab=99.92 E-value=7.9e-23 Score=189.60 Aligned_cols=166 Identities=20% Similarity=0.269 Sum_probs=132.7
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCC---------------EEEecCCCCCcHHHHHhhhcccCC
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGE---------------EIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~---------------~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
++++++++.+++++|.++.++++++|+|++ ++.+++++|| +|+++.|.|..+...+...+...|
T Consensus 45 ~~~~~~~~~~a~~~g~~~~~~~~g~t~al~~al~al~~~Gd~~~~~~~~~s~~~~~eVi~~~~~~~~~~~~~~~~~~~~g 124 (363)
T TIGR01437 45 ELVNKTGEYIANLLGVEDAVIVSSASAGIAQSVAAVITRGNRYLVENLHDSKIEVNEVVLPKGHNVDYGAPVETMVRLGG 124 (363)
T ss_pred HHHHHHHHHHHHhhCCCeEEEEcCHHHHHHHHHHHHhcCCCcchhhcccccccccceEEEECccchhcCCchHHHHHhcC
Confidence 479999999999999998888899999987 6677889998 899988766544222235566788
Q ss_pred cEEEEeCC---CCHHHHHhhhCCCceEEE-EeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEE
Q 016612 119 VVVKRVNT---CDLDEVASAIGPWTKLVW-VESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIV 194 (386)
Q Consensus 119 ~~~~~v~~---~d~~~l~~~~~~~~~~v~-~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~ 194 (386)
+++++++. .|+++++++++++|++++ +++++||+|.+.|+++|.++|+++|+++++|++|+... ......+.|++
T Consensus 125 ~~~v~v~~~~~~d~~~le~ai~~~t~ai~~v~~~~~~~g~~~~~~~i~~~a~~~gi~vivD~a~~~~~-~~~~~~g~D~~ 203 (363)
T TIGR01437 125 GKVVEAGYANECSAEQLEAAITEKTAAILYIKSHHCVQKSMLSVEDAAQVAQEHNLPLIVDAAAEEDL-QKYYRLGADLV 203 (363)
T ss_pred CeEEEEcCCCCCCHHHHHHhcChhceEEEEEecCCCCcCCcCCHHHHHHHHHHcCCeEEEECCCCCch-HHHHHcCCCEE
Confidence 88888875 389999999999999766 57889999999999999999999999999999997322 12234578999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHH
Q 016612 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~ 225 (386)
++|+||++.|| ++|+++++++ +.+...
T Consensus 204 ~~S~~K~l~gp---~~G~l~~~~~-~i~~~~ 230 (363)
T TIGR01437 204 IYSGAKAIEGP---TSGLVLGKKK-YIEWVK 230 (363)
T ss_pred EEeCCcccCCC---ceEEEEEcHH-HHHHHH
Confidence 99999998766 4799887644 444333
No 197
>PRK14012 cysteine desulfurase; Provisional
Probab=99.92 E-value=6e-23 Score=194.05 Aligned_cols=160 Identities=21% Similarity=0.220 Sum_probs=131.5
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHh----cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~----~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..+++++.+++++|.+ +.+++++||++++. +.++ +++||+|++++++|+++...+.. ++..|++++.++.+
T Consensus 50 ~~~~~r~~ia~~~g~~~~~v~~~~g~t~al~~~l~~l~~~~~~~gd~Vi~~~~~~~s~~~~~~~-~~~~g~~~~~v~~~~ 128 (404)
T PRK14012 50 AVDIARNQIADLIGADPREIVFTSGATESDNLAIKGAAHFYQKKGKHIITSKTEHKAVLDTCRQ-LEREGFEVTYLDPQS 128 (404)
T ss_pred HHHHHHHHHHHHcCcCcCeEEEeCCHHHHHHHHHHHHHHhhcCCCCEEEEecCccHHHHHHHHH-HHhCCCEEEEEccCC
Confidence 5778899999999986 36666677788864 3333 47899999999999888766543 34568898888753
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|+++++++++++++++++++++||||.+.|+++|.++|+++|+++|+|++++.|... +....++|++++|++|.+
T Consensus 129 ~g~~d~~~l~~~i~~~t~lv~~~~~~n~tG~~~~~~~I~~la~~~g~~vivD~a~~~g~~~~~~~~~~~D~~~~s~~K~~ 208 (404)
T PRK14012 129 NGIIDLEKLEAAMRDDTILVSIMHVNNEIGVIQDIAAIGEICRERGIIFHVDAAQSVGKVPIDLSKLKVDLMSFSAHKIY 208 (404)
T ss_pred CCcCCHHHHHHhcCCCCEEEEEECcCCCccchhhHHHHHHHHHHcCCEEEEEcchhcCCcccCcccCCCCEEEEehhhcc
Confidence 899999999999999999999999999999999999999999999999999988764 444568999999999976
Q ss_pred ccCCCceEEEEEEcChh
Q 016612 203 AGHSDVMAGVLAVKGER 219 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~ 219 (386)
||.| .|+++++++.
T Consensus 209 -gp~g--~G~l~~~~~~ 222 (404)
T PRK14012 209 -GPKG--IGALYVRRKP 222 (404)
T ss_pred -CCCc--eEEEEEecCC
Confidence 6665 6887777553
No 198
>TIGR03235 DNA_S_dndA cysteine desulfurase DndA. This model describes DndA, a protein related to IscS and part of a larger family of cysteine desulfurases. It is encoded, typically, divergently from a conserved, sparsely distributed operon for sulfur modification of DNA. This modification system is designated dnd, after the phenotype of DNA degradation during electrophoresis. The system is sporadically distributed in bacteria, much like some restriction enzyme operons. DndB is described as a putative ATPase.
Probab=99.92 E-value=4.7e-23 Score=191.55 Aligned_cols=159 Identities=25% Similarity=0.272 Sum_probs=129.6
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcH-HHHHHHH-HHhc----CCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSG-MAALAAV-THLL----GTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~g-t~al~~~-~~~~----~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
..+++++.+++++|.+ +.+++++| +++++.+ ..+. ++| +.|++....|+++...+.. ++..|++++.++.+
T Consensus 43 ~~~~~r~~la~~~g~~~~~v~~~~g~t~a~~~~l~~l~~~~~~~g~~~vi~~~~~~~s~~~~~~~-~~~~G~~v~~v~~~ 121 (353)
T TIGR03235 43 AVERARKQVAEALGADTEEVIFTSGATESNNLAILGLARAGEQKGKKHIITSAIEHPAVLEPIRA-LERNGFTVTYLPVD 121 (353)
T ss_pred HHHHHHHHHHHHhCCCCCeEEEeCCHHHHHHHHHHHHHHhcccCCCCeeeEcccccHHHHHHHHH-HHhcCCEEEEEccC
Confidence 4678999999999986 45555555 6888644 4443 356 7899998899888766643 35679999988753
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.+++++++|++++++||||.+.|+++|.++|+++|+++++|++++.|... +....++|++++|++|+
T Consensus 122 ~~~~~d~~~l~~~l~~~~~lv~~~~~~n~tG~~~~~~~I~~l~~~~~~~~ivD~a~~~g~~~~~~~~~~~D~~~~s~~K~ 201 (353)
T TIGR03235 122 ESGRIDVDELADAIRPDTLLVSIMHVNNETGSIQPIREIAEVLEAHEAFFHVDAAQVVGKITVDLSADRIDLISCSGHKI 201 (353)
T ss_pred CCCcCCHHHHHHhCCCCCEEEEEEcccCCceeccCHHHHHHHHHHcCCEEEEEchhhcCCccccccccCCCEEEeehhhc
Confidence 889999999889999999999999999999999999999999999999999988764 33446899999999999
Q ss_pred cccCCCceEEEEEEcCh
Q 016612 202 IAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~ 218 (386)
+ ||+| +|+++++++
T Consensus 202 ~-gp~g--~g~l~~~~~ 215 (353)
T TIGR03235 202 Y-GPKG--IGALVIRKR 215 (353)
T ss_pred C-CCCc--eEEEEEccC
Confidence 6 7777 799988865
No 199
>PRK13479 2-aminoethylphosphonate--pyruvate transaminase; Provisional
Probab=99.92 E-value=8.7e-23 Score=190.91 Aligned_cols=286 Identities=17% Similarity=0.168 Sum_probs=188.3
Q ss_pred hHHHHHHHHHhhcCCC---c-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 56 TRDALESLLAKLDKAD---R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
..+++++.+++++|.+ + .+++++|++++. ++.++..+||.|++..+.|.+.. +...++..|++++.++..
T Consensus 38 ~~~~~~~~l~~l~~~~~~~~~i~~~~~gt~~l~~~~~~l~~~~~~vlv~~~~~~~~~--~~~~~~~~g~~~~~i~~~~~~ 115 (368)
T PRK13479 38 LTASVRAKLVAIATGEEGYTCVPLQGSGTFSVEAAIGSLVPRDGKVLVPDNGAYGAR--IAQIAEYLGIAHVVLDTGEDE 115 (368)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCCchHHH--HHHHHHHcCCcEEEEECCCCC
Confidence 6888999999999875 2 345677789987 55667889999998887776542 235667789988888763
Q ss_pred --CHHHHHhhhC--CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 --DLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 --d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
|++++++.++ ++++++++++++||||...|+++|.++|+++|+++|+|++++.+... +....+.|++++|++|++
T Consensus 116 ~~d~~~l~~~l~~~~~~~~v~~~~~~~~tG~~~~~~~i~~l~~~~~~~livDa~~~~g~~~~~~~~~~~d~~v~s~~K~l 195 (368)
T PRK13479 116 PPDAAEVEAALAADPRITHVALVHCETTTGILNPLDEIAAVAKRHGKRLIVDAMSSFGAIPIDIAELGIDALISSANKCI 195 (368)
T ss_pred CCCHHHHHHHHHhCCCCcEEEEEcccCccccccCHHHHHHHHHHcCCEEEEEcccccCCccccccccCceEEEecCcccc
Confidence 7899998886 35678999999999999999999999999999999999988776543 334557899999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhh---------------cCC--CCChhhHHHHHhcCCc------HHHHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNA---------------EGS--GLAPFDCWICLRGVKT------MALRVEKQQD 259 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~---------------~~~--~~~~~~~~~~~~~~~~------~~~~~~~~~~ 259 (386)
.|++| .|+++++++ +.+.+...... ... ..+....+.+..+++. +..+.++..+
T Consensus 196 ~g~~G--~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~l~~al~~l~~~~~~~~~~~~~~~ 272 (368)
T PRK13479 196 EGVPG--FGFVIARRS-ELEACKGNSRSLSLDLYDQWAYMEKTGQWRFTPPTHVVAAFYQALLELEEEGGVPARGARYAN 272 (368)
T ss_pred ccCCC--ceEEEECHH-HHHHhhcCCCCeeecHHHHHhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhCHHHHHHHHHH
Confidence 88888 599999754 43333221100 000 1121111222222211 2333344455
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcCcceeccCCCCccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISM 337 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~ 337 (386)
..+.+.+.+++.. +. ++.+.......++.|.++.. .....+.+.+...|+.++.|...
T Consensus 273 ~~~~l~~~L~~~g---------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~g~~~----- 332 (368)
T PRK13479 273 NQRTLVAGMRALG---------FE------PLLDAEIQSPIIVTFHAPADPAYDFKEFYERLKEQGFVIYPGKLT----- 332 (368)
T ss_pred HHHHHHHHHHHcC---------Cc------ccCCchhcCceEEEEECCCCCCcCHHHHHHHHHHCCEEEecCCCC-----
Confidence 5555555555432 11 11000001123455554332 23567888888888887665321
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEe-c---cCChHHHHHHHHHHHhcCC
Q 016612 338 PCFMSHASIPVEVRQARGLTEDLVRISV-G---IEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 338 p~~~~~~~~~~~~~~~~~~~~~~iRis~-~---~~~~~~~i~~l~~~l~~~~ 385 (386)
..+++|+|. + .++++.+++.|++++++.+
T Consensus 333 -------------------~~~~iRis~~~~~t~edi~~~l~~L~~~l~~~~ 365 (368)
T PRK13479 333 -------------------QVDTFRIGCIGDVDAADIRRLVAAIAEALYWMG 365 (368)
T ss_pred -------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHHHcC
Confidence 134599986 4 4888889999988887654
No 200
>PRK05937 8-amino-7-oxononanoate synthase; Provisional
Probab=99.91 E-value=1.7e-22 Score=188.62 Aligned_cols=319 Identities=18% Similarity=0.187 Sum_probs=191.8
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeee---cCCCC-CC-CCcccc-C-C-CC-chHHHHHHHHHhhcCCCceEEeCcHH
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFK---QPSAT-EN-GPYDYT-R-S-GN-PTRDALESLLAKLDKADRALCFTSGM 80 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~-~~-~~~~y~-~-~-g~-~~~~~l~~~l~~~~g~~~~i~~~~gt 80 (386)
+...++++ +|||+|....|........ ..... +. +....+ + . |. +..+++|+.+++++|.++.+++++|+
T Consensus 3 ~~~~~~~~-s~~YL~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~gs~~~~g~~~~~~~~e~~la~~~~~~~~l~~~sG~ 81 (370)
T PRK05937 3 ESLSIDFV-TNDFLGFSRSDTLVHEVEKRYRLYCRQFPHAQLGYGGSRAILGPSSLLDDLEHKIAHFHGAPEAFIVPSGY 81 (370)
T ss_pred CCceEEeE-CCCccCCCCCHHHHHHHHHHHHHhccccCCCCCCCCCcCcccCChHHHHHHHHHHHHHhCCCeEEEECChH
Confidence 34688999 9999998887755422111 10000 00 111111 2 1 33 47999999999999999889999999
Q ss_pred HHHHHHHH-hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEEEEeCCCCCCc
Q 016612 81 AALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVWVESPTNPRQ 153 (386)
Q Consensus 81 ~al~~~~~-~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v~~~~~~nptG 153 (386)
.++..+.. +.++||.|++....|.+....+.. . .+.. +.++..|++++++.++ +++.+|++++++|++|
T Consensus 82 ~a~~~~~~~~~~~~d~ii~d~~~H~sv~~~~~~-~--~~~~-~~~~~~d~~~l~~~l~~~~~~~~~~~~v~v~~v~s~~G 157 (370)
T PRK05937 82 MANLGLCAHLSSVTDYVLWDEQVHISVVYSLSV-I--SGWH-QSFRHNDLDHLESLLESCRQRSFGRIFIFVCSVYSFKG 157 (370)
T ss_pred HHHHHHHHHhCCCCCEEEEEhhhhHHHHHHHHH-c--CCce-EEecCCCHHHHHHHHHhhhccCCCcEEEEEecCCCCCC
Confidence 77654444 457888888888889888766532 2 2333 3456678999998876 2456778899999999
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCC-----CCC---ccEEEeccccccccCCCceEEEEEEcChhHHHHHH
Q 016612 154 QICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL-----ELG---ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (386)
Q Consensus 154 ~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~-----~~~---~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~ 225 (386)
.+.|+++|.++|+++|+++++|++|+.|.+.... .++ .++++.|+||.+ |+.| +|++ +. +++...+.
T Consensus 158 ~i~pl~eI~~l~~~~~~~livDea~~~G~~g~~g~g~~~~~~~~~~~~~~~tlsK~~-g~~G--~~vl-~~-~~~~~~~~ 232 (370)
T PRK05937 158 TLAPLEQIIALSKKYHAHLIVDEAHAMGIFGDDGKGFCHSLGYENFYAVLVTYSKAL-GSMG--AALL-SS-SEVKQDLM 232 (370)
T ss_pred CccCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCcEEEEechhhh-hcCc--eEEE-cC-HHHHHHHH
Confidence 9999999999999999999999999977654221 122 246788999998 4555 3444 44 33333222
Q ss_pred Hh--hhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEE
Q 016612 226 FL--QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 303 (386)
Q Consensus 226 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 303 (386)
.. ......+.++.....+..+++.+....+...+..+.+.+++.+. +... ..+....
T Consensus 233 ~~~~~~~~s~~~~~~~~~a~~aal~~l~~~~~~~~~~l~~l~~~l~~~----------l~~~-----------~~~~~~~ 291 (370)
T PRK05937 233 LNSPPLRYSTGLPPHLLISIQVAYDFLSQEGELARKQLFRLKEYFAQK----------FSSA-----------APGCVQP 291 (370)
T ss_pred HhCCCCeecCCCCHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHh----------cCCC-----------CCCCEEE
Confidence 11 11122334454444333433332211122233444444544432 1110 0112233
Q ss_pred EEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHH
Q 016612 304 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 379 (386)
Q Consensus 304 ~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~ 379 (386)
+.+++.. ...+.+.+..+|+.++. +++| ..+.+|+|++. ++++.+++.|.+
T Consensus 292 i~~~~~~-~~~~~~~L~~~gi~v~~------~~~~------------------~~~~iRis~~~~~t~edid~l~~~L~~ 346 (370)
T PRK05937 292 IFLPGIS-EQELYSKLVETGIRVGV------VCFP------------------TGPFLRVNLHAFNTEDEVDILVSVLAT 346 (370)
T ss_pred EEeCChh-HHHHHHHHHHCCeeEEe------eCCC------------------CCCEEEEEcCCCCCHHHHHHHHHHHHH
Confidence 4444433 45677777777775432 1112 13469999964 666666666666
Q ss_pred HHhcC
Q 016612 380 ALRTG 384 (386)
Q Consensus 380 ~l~~~ 384 (386)
.+++.
T Consensus 347 ~~~~~ 351 (370)
T PRK05937 347 YLEKY 351 (370)
T ss_pred HHHHh
Confidence 66554
No 201
>cd00613 GDC-P Glycine cleavage system P-protein, alpha- and beta-subunits. This family consists of Glycine cleavage system P-proteins EC:1.4.4.2 from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex EC:2.1.2.10 (GDC) also annotated as glycine cleavage system or glycine synthase. GDC consists of four proteins P, H, L and T. The reaction catalysed by this protein is: Glycine + lipoylprotein <= S-aminomethyldihydrolipoylprotein + CO2. Alpha-beta-type dimers associate to form an alpha(2)beta(2) tetramer, where the alpha- and beta-subunits are structurally similar and appear to have arisen by gene duplication and subsequent divergence with a loss of one active site. The members of this CD are widely dispersed among all three forms of cellular life.
Probab=99.91 E-value=4.1e-22 Score=188.45 Aligned_cols=164 Identities=26% Similarity=0.284 Sum_probs=130.7
Q ss_pred CCc-hHHHHHHHHHhhcCCC--ceEEeCcHH-HHHHHH-HHhcCC--CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 53 GNP-TRDALESLLAKLDKAD--RALCFTSGM-AALAAV-THLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~~--~~i~~~~gt-~al~~~-~~~~~~--g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
|.+ +++++++++++++|.+ +.+++++|+ ++..++ ...+++ ||+|+++++.|+++...+....+..|.+++.++
T Consensus 61 g~~~~~~~~~~~la~~~g~~~~~v~~~~~g~~~~~~~~~~~~~~~~~gd~Vl~~~~~h~~~~~~~~~~~~~~g~~~~~v~ 140 (398)
T cd00613 61 GRLQALFELQTMLCELTGMDVANASLQDEATAAAEAAGLAAIRAYHKRNKVLVPDSAHPTNPAVARTRGEPLGIEVVEVP 140 (398)
T ss_pred hHHHHHHHHHHHHHHHHCCCccceeccCchHHHHHHHHHHHHhcccCCCEEEEcCccCcchHHHHHHhcccCCcEEEEec
Confidence 665 7999999999999987 566666666 444444 335665 999999999999998777655566678888887
Q ss_pred CC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccH-HHHHHHHHHcCCEEEEeCCCCCCC-ccCCCCCCccEEEecc
Q 016612 126 TC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDI-RKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVMHSA 198 (386)
Q Consensus 126 ~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l-~~i~~la~~~~~~li~D~a~~~~~-~~~~~~~~~di~~~S~ 198 (386)
.. |++++++.+++++++|++++|+ ++|.+.|+ ++|.++|+++|+++|+|++++.+. ..++...++|++++|+
T Consensus 141 ~~~~~~~d~~~l~~~i~~~t~~viv~~~~-~~G~~~~~l~~i~~la~~~g~~livD~~~~~~~~~~~~~~~~~d~~~~s~ 219 (398)
T cd00613 141 SDEGGTVDLEALKEEVSEEVAALMVQYPN-TLGVFEDLIKEIADIAHSAGALVYVDGDNLNLTGLKPPGEYGADIVVGNL 219 (398)
T ss_pred cCCCCCcCHHHHHHhcCCCeEEEEEECCC-CCceecchHHHHHHHHHhcCCEEEEEeccccccCCCChHHcCCCEEEeec
Confidence 63 6899999999999999999985 89999885 999999999999999999986544 2234456899999999
Q ss_pred ccccccC---CCceEEEEEEcCh
Q 016612 199 TKFIAGH---SDVMAGVLAVKGE 218 (386)
Q Consensus 199 sK~~~g~---~g~~~G~i~~~~~ 218 (386)
||++ +| +|.++|+++.+++
T Consensus 220 ~K~~-~p~g~Ggp~~g~l~~~~~ 241 (398)
T cd00613 220 QKTG-VPHGGGGPGAGFFAVKKE 241 (398)
T ss_pred cccC-CCCCCCCCceeEEEEhhh
Confidence 9998 44 2456899998754
No 202
>TIGR00474 selA seryl-tRNA(sec) selenium transferase. In bacteria, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This model describes SelA. This model excludes homologs that appear to differ in function from Frankia alni, Helicobacter pylori, Methanococcus jannaschii and other archaea, and so on.
Probab=99.91 E-value=1.4e-22 Score=190.50 Aligned_cols=213 Identities=23% Similarity=0.327 Sum_probs=170.2
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhcCCCCEEEecCCCC---CcHHHHHhhhcccCCcEEEEeCC---CC
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLY---GGTDRLLSRVTPKTGVVVKRVNT---CD 128 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~---~~~~~~~~~~~~~~g~~~~~v~~---~d 128 (386)
...+.+++.+++++|.++.+++++|++|+.+++..+.+||+|++++..| ++.... ....+..|+++++++. .+
T Consensus 122 ~r~~~le~~lA~l~gae~alvv~sg~aAi~l~l~~l~~GdeVIvs~~e~v~~ggs~~i-~~~~~~~G~~~~~v~~~~~~~ 200 (454)
T TIGR00474 122 SRYSHVEGLLCELTGAEDALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFRI-PDVMEQSGAKLVEVGTTNRTH 200 (454)
T ss_pred hHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHhCCcCEEEECCChhhhhcchhhH-HHHHHHcCCEEEEeCCCCCCC
Confidence 3468899999999999999999999999886667789999999998764 444333 3456778999999986 47
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCC--c--ccccHHHHHHHHHHcCCEEEEeCCCCC---------CC---ccCCCCCCcc
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPR--Q--QICDIRKIAEMAHAHGALLLVDNSIMS---------PV---LSRPLELGAD 192 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~npt--G--~~~~l~~i~~la~~~~~~li~D~a~~~---------~~---~~~~~~~~~d 192 (386)
+++++++++++|++|++++++|++ | .+.|+++|+++|+++|+++++|.+.+. +. ..++.+.|+|
T Consensus 201 l~dle~aI~~~T~lv~~~h~sN~~~~G~~~~~dl~~I~~la~~~g~~vivD~~sG~l~~~~~~gl~~~p~~~~~~~~GaD 280 (454)
T TIGR00474 201 LKDYEDAITENTALLLKVHTSNYRIVGFTEEVSIAELVALGREHGLPVMEDLGSGSLVDLSRYGLPDEPTVQEVIAAGVD 280 (454)
T ss_pred HHHHHHhcCcCCEEEEEEccCcccccCCCCCCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCcccccHhHcCCC
Confidence 899999999999999999999985 6 468999999999999999999986321 11 2245567999
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHH--------HHHH-------HhhhhcCCCCChhhHHHHHhcCCcHHHHHHHH
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLA--------KELY-------FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQ 257 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~--------~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (386)
++++|++|+++||. +|+++++++.+. +.++ .+....+..+.+..++....+++.+..+.++.
T Consensus 281 iv~fSg~K~LgGp~---~G~i~g~~~~i~~l~~~~l~r~lr~~k~~la~l~~~l~~~~~~~~a~~~~~~l~~l~~~~~~~ 357 (454)
T TIGR00474 281 LVTFSGDKLLGGPQ---AGIIVGKKELIERLKKNPLTRALRVDKLTLAALEATLRLYLDPEKALEKIPTLRMLTQSPEEL 357 (454)
T ss_pred EEEecCccccCCCe---EEEEEECHHHHHhhhhchhHHHHhhChHHHHHHHHHHHHHhCchhhhhhchHHHHhccCHHHH
Confidence 99999999998773 799999865441 2222 22334445667777788888889999999999
Q ss_pred HHHHHHHHHHHhhC
Q 016612 258 QDNAQKIAEFLASH 271 (386)
Q Consensus 258 ~~~~~~l~~~l~~~ 271 (386)
.+++..+.++|++.
T Consensus 358 ~~~A~~la~~L~~~ 371 (454)
T TIGR00474 358 RARAERLAKRLKAA 371 (454)
T ss_pred HHHHHHHHHHHHhh
Confidence 99999999999874
No 203
>TIGR03588 PseC UDP-4-keto-6-deoxy-N-acetylglucosamine 4-aminotransferase. This family of enzymes are aminotransferases of the pfam01041 family involved in the biosynthesis of pseudaminic acid. They convert UDP-4-keto-6-deoxy-N-acetylglucosamine into UDP-4-amino-4,6-dideoxy-N-acetylgalactose. Pseudaminic acid has a role in surface polysaccharide in Pseudomonas as well as in the modification of flagellin in Campylobacter and Helicobacter species.
Probab=99.91 E-value=8.1e-22 Score=184.86 Aligned_cols=300 Identities=19% Similarity=0.213 Sum_probs=195.6
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHHH-HHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAAV-THL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~-~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
+...++++.+++++|.+..+++++|++|+..+ .++ +++||+|+++.++|.++. ..++..|++++.++.+
T Consensus 29 ~~~~~le~~la~~~g~~~~v~~~sgt~al~~~l~al~~~~Gd~Viv~~~~~~~~~----~~~~~~G~~~~~~~~~~~~~~ 104 (380)
T TIGR03588 29 PTVPAFEEALAEYVGAKYAVAFNSATSALHIACLALGVGPGDRVWTTPITFVATA----NCALYCGAKVDFVDIDPDTGN 104 (380)
T ss_pred hhHHHHHHHHHHHHCCCeEEEEcCHHHHHHHHHHHcCCCCCCEEEeCCcchHHHH----HHHHHcCCEEEEEecCCCcCC
Confidence 56788999999999999889999999999754 455 789999999999998875 4456789999988762
Q ss_pred -CHHHHHhhhC----CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCc----cEEEecc
Q 016612 128 -DLDEVASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA----DIVMHSA 198 (386)
Q Consensus 128 -d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~----di~~~S~ 198 (386)
|++++++.++ +++++|++. |++|...++++|.++|+++|++||+|++|+.|...+....+. |+.++|+
T Consensus 105 ~d~~~l~~~i~~~~~~~t~~v~~~---~~~G~~~~~~~i~~l~~~~~~~lI~D~a~a~g~~~~~~~~g~~~~~d~~~~S~ 181 (380)
T TIGR03588 105 IDEDALEKKLAAAKGKLPKAIVPV---DFAGKSVDMQAIAALAKKHGLKIIEDASHALGAEYGGKPVGNCRYADATVFSF 181 (380)
T ss_pred cCHHHHHHHhhcccCCCceEEEEe---CCCCccCCHHHHHHHHHHcCCEEEEECCCcccCccCCEeCCCccccceEEEec
Confidence 7899999998 789998854 468999999999999999999999999999876443333444 9999998
Q ss_pred c--cccccCCCceEEEEEEcChhHHHHHHHhhhhc-------------------------CCCCChhhHHHHHhcCCcHH
Q 016612 199 T--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-------------------------GSGLAPFDCWICLRGVKTMA 251 (386)
Q Consensus 199 s--K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~ 251 (386)
| |++..+. +|+++.+++.+.+.++...... ...++..++......+..+.
T Consensus 182 ~~~K~~~~~~---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~n~~m~~l~aa~g~~qL~~l~ 258 (380)
T TIGR03588 182 HPVKIITTAE---GGAVTTNDEELAERMRLLRSHGITKDPLLFEKQDEGPWYYEQQELGFNYRMTDIQAALGLSQLKKLD 258 (380)
T ss_pred CCCCcccccC---ceEEEECCHHHHHHHHHHHHCCCCCCcccccccccCcceeeeeccccccCccHHHHHHHHHHHHHHH
Confidence 7 8886543 6888888787776665443211 11223344444444455556
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccC--CCCceEEEEeCC--HHhHHHHHhhcCcceeccC
Q 016612 252 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK--GAGSVLSFLTGS--LALSKHVVETTKYFSITVS 327 (386)
Q Consensus 252 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~--~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~ 327 (386)
...++..++++.+.+.|...+.+ .++..... ....++.+.++. ....+++.+.|...||.++
T Consensus 259 ~~~~~r~~~~~~~~~~L~~~~~~--------------~~~~~~~~~~~~~~~~~i~~~~~~~~~r~~l~~~L~~~gI~~~ 324 (380)
T TIGR03588 259 RFVAKRREIAARYDRLLKDLPYF--------------TPLTIPLGSKSAWHLYPILLDQEFGCTRKEVFEALRAAGIGVQ 324 (380)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCc--------------cCCCCCCCCEeEEEEEEEEECCcCCCCHHHHHHHHHHCCCCcc
Confidence 66666666777777666654321 11100000 001222333331 2346777787877888765
Q ss_pred CCCcccccccccccc---CCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 328 FGSVKSLISMPCFMS---HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~---~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.... .+...|+... ...++.... +....+++.++..-.++.++.+.++|++
T Consensus 325 ~~~~-~~~~~~~~~~~~~~~~~p~a~~----~~~~~l~lP~~~~l~~~dv~~i~~~l~~ 378 (380)
T TIGR03588 325 VHYI-PVHLQPYYRQGFGDGDLPSAEN----FYLAEISLPLHPALTLEQQQRVVETLRK 378 (380)
T ss_pred cCCc-ccccChhhhccCCcCCCcHHHH----HHhceEEcCCCCCCCHHHHHHHHHHHHH
Confidence 4321 1122232211 111222211 1235688888765555556666665554
No 204
>cd06502 TA_like Low-specificity threonine aldolase (TA). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). TA catalyzes the conversion of L-threonine or L-allo-threonine to glycine and acetaldehyde in a secondary glycine biosynthetic pathway.
Probab=99.91 E-value=4e-22 Score=184.36 Aligned_cols=278 Identities=19% Similarity=0.152 Sum_probs=182.7
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC----CC
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CD 128 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~d 128 (386)
.+..+++++.+++++|.++.+++++|++++. ++..++++||.|+++++.|.+..... ......|++++.++. .|
T Consensus 31 ~~~~~~l~~~~a~~~g~~~~~~~~~gt~a~~~~~~~l~~~gd~v~~~~~~~~~~~~~~-~~~~~~g~~~~~v~~~~~~~d 109 (338)
T cd06502 31 DPTTAKLEARAAELFGKEAALFVPSGTAANQLALAAHTQPGGSVICHETAHIYTDEAG-APEFLSGVKLLPVPGENGKLT 109 (338)
T ss_pred CHHHHHHHHHHHHHhCCCeEEEecCchHHHHHHHHHhcCCCCeEEEecCcceeeecCC-cHHHHcCceEEeecCCCCcCC
Confidence 3578999999999999668888889998886 45557899999999999997653211 123347888888876 38
Q ss_pred HHHHHhhhCC-------CceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCC------CccCCCCCCcc
Q 016612 129 LDEVASAIGP-------WTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSP------VLSRPLELGAD 192 (386)
Q Consensus 129 ~~~l~~~~~~-------~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~------~~~~~~~~~~d 192 (386)
++++++++++ ++++|++++|+|| |.+. ++++|.++|+++|+++|+|++|..+ ........+.|
T Consensus 110 ~~~l~~~i~~~~~~~~~~~~~v~l~~p~n~-g~~~~~~~l~~i~~~~~~~~~~livDea~~~~~~~~~~~~~~~~~~~~d 188 (338)
T cd06502 110 PEDLEAAIRPRDDIHFPPPSLVSLENTTEG-GTVYPLDELKAISALAKENGLPLHLDGARLANAAAALGVALKTYKSGVD 188 (338)
T ss_pred HHHHHHHhhccCCCcCCcceEEEEEeecCC-ccccCHHHHHHHHHHHHHcCCeEeechHHHHHHHHhcCCCHHHHHhcCC
Confidence 8999998864 7899999999998 5443 5788999999999999999986422 11111224678
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhc--CCCCChhhHHHHHhcCCc--HHHHHHHHHHHHHHHHHHH
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE--GSGLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l 268 (386)
+++.|+||+++.++ +++++.+ +++.+.+....... ....++..+.+....++. ...+.++..++.+.+.+.|
T Consensus 189 ~~~~s~sK~~~~~~---g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~L~~~~~~~~~~~~~~~~~~l~~~L 264 (338)
T cd06502 189 SVSFCLSKGGGAPV---GAVVVGN-RDFIARARRRRKQAGGGMRQSGFLAAAGLAALENDLWLRRLRHDHEMARRLAEAL 264 (338)
T ss_pred EEEEeccccCCCcc---ceEEECC-HHHHHHHHHHHHHhCCChhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999996553 3445554 55655555443322 223344444555454443 3444556666667777777
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcC---cceeccCCCCccccccccccccCC
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTK---YFSITVSFGSVKSLISMPCFMSHA 344 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~---~~gi~~~~G~~~~~~~~p~~~~~~ 344 (386)
++.+ +. ++ ...++++.+..+ ......++.+++. ..|+.+...
T Consensus 265 ~~~~---------~~------~~----~~~~~~~~v~~~~~~~~~~~l~~~l~~~~~~gi~~~~~--------------- 310 (338)
T cd06502 265 EELG---------GL------ES----EVQTNIVLLDPVEANAVFVELSKEAIERRGEGVLFYAW--------------- 310 (338)
T ss_pred HhcC---------CC------cc----cccCCeEEEecCCccHHHHHHHHHHHHhhhCCEEEEec---------------
Confidence 6543 11 00 124567777664 3333445554432 335433211
Q ss_pred CCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 345 SIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 345 ~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
..+++|++++....++.++.+.+++++
T Consensus 311 ------------~~~~lRi~~~~~~~~~~i~~~~~~l~~ 337 (338)
T cd06502 311 ------------GEGGVRFVTHWDTTEEDVDELLSALKA 337 (338)
T ss_pred ------------CCCeEEEEeecCCCHHHHHHHHHHHhc
Confidence 125699999987777777777777654
No 205
>COG0399 WecE Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis [Cell envelope biogenesis, outer membrane]
Probab=99.90 E-value=6.7e-22 Score=178.90 Aligned_cols=303 Identities=22% Similarity=0.258 Sum_probs=211.7
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH--hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH--LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~--~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.|...++|+.+++++|++.++.++|||.|+++.+. -+.|||+|+++..+|.++. ......|.+++++|.+
T Consensus 33 G~~v~~FE~~~ae~~G~k~ava~~sgT~AL~laL~al~ig~GDeVI~ps~TfvATa----n~i~~~Ga~PVFvDid~~T~ 108 (374)
T COG0399 33 GPFVRRFEQAFAEYLGVKYAVAVSSGTAALHLALLALAIGPGDEVIVPSFTFVATA----NAVLLVGAKPVFVDIDPDTL 108 (374)
T ss_pred ChHHHHHHHHHHHHhCCCeEEEecChHHHHHHHHHhcCCCCCCEEEecCCchHHHH----HHHHHcCCeEEEEecCCccc
Confidence 36788999999999999999999999999985544 3799999999999998885 4455889999999975
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCC--ccEEEecc--ccc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKF 201 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~--~di~~~S~--sK~ 201 (386)
|++.++++++++||+|+..| -.|...++++|.++|++||++||+|.+++.|........| .|+.++|| .|.
T Consensus 109 nid~~~ie~aIt~~tKAIipVh---l~G~~~dm~~i~~la~~~~l~vIEDaAqa~Ga~y~gk~vGt~Gd~~~fSF~~~K~ 185 (374)
T COG0399 109 NIDPDLIEAAITPRTKAIIPVH---LAGQPCDMDAIMALAKRHGLPVIEDAAQAHGATYKGKKVGSFGDIGAFSFHATKN 185 (374)
T ss_pred CCCHHHHHHHcccCCeEEEEeh---hccCCCCHHHHHHHHHHcCCeEEEEcchhccCeecCcccccccceEEEEecCCCC
Confidence 89999999999999999544 4688899999999999999999999999998866544444 47888885 577
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcC----------------CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG----------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIA 265 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 265 (386)
+... -||.++++++++.++.+.+...+. ..++..+++..+..++.+....++..++++...
T Consensus 186 ittg---EGGav~tnd~ela~k~~~lr~hG~~~~~~~~y~~~~~G~N~rm~~iqAAigl~QL~~l~~~~~~R~~~a~~Y~ 262 (374)
T COG0399 186 LTTG---EGGAVVTNDEELAEKARSLRNHGLSRDAVFKYLHEELGYNYRLTEIQAAIGLAQLERLDEINERRREIAQIYA 262 (374)
T ss_pred cccc---CceEEEeCCHHHHHHHHHHHHhCcCCCccccceeeecccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7532 479999999999887766544322 235567777777778777777777778887777
Q ss_pred HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcceeccCCCCccccccccccccC-
Q 016612 266 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH- 343 (386)
Q Consensus 266 ~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~- 343 (386)
+.|++.+. ...+..... . ...-.++.+.++.. ...+.+.+.|+..|+. .......+...|++...
T Consensus 263 ~~l~~~~~---~~~p~~~~~--~-------~~~~~~~~i~~~~~~~~R~~l~~~L~~~gi~-~~~~~~P~~~~~~~~~~~ 329 (374)
T COG0399 263 EALKGLPG---ITLPPEPDG--A-------VHAWHLYTILVDEEGISRDALMESLKEAGVG-AVVYFRPLHLQPAYRQLG 329 (374)
T ss_pred HHhhcCCC---ccccCCCCC--c-------eeeeeeeEEEecCCCCCHHHHHHHHHhCCCC-ceEEeeccccchhhhccc
Confidence 77776542 111111100 0 01112334444432 4567888888888776 22233333333332211
Q ss_pred ----CCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 344 ----ASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 344 ----~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
..++.... .....+++-+. .++++++++.+++++..
T Consensus 330 ~~~~~~lp~ae~----~~~r~l~LP~~p~l~~~~~~~V~~~l~~~~~~ 373 (374)
T COG0399 330 YFPEGDLPNAED----LSERILSLPLHPNLSEEDVDRVIEALKEVLGS 373 (374)
T ss_pred ccccCCCchHHH----HhhCeEEccCCCCCCHHHHHHHHHHHHHHhcc
Confidence 22332211 12344666654 37777777777777653
No 206
>TIGR03301 PhnW-AepZ 2-aminoethylphosphonate aminotransferase. This family includes a number of 2-aminoethylphosphonate aminotransferases, some of which are indicated to operate in the catabolism of 2-aminoethylphosphonate (AEP) and others which are involved in the biosynthesis of the same compound. The catabolic enzyme (PhnW, ) is known to use pyruvate:alanine as the transfer partner and is modeled by the equivalog-level alignment (TIGR02326). The PhnW family is apparently a branch of a larger tree including genes (AepZ) adjacent to others responsible for the biosynthesis of phosphonoacetaldehyde. The identity of the transfer partner is unknown for these enzymes and considering the reversed flux compared to PhnW, it may very well be different.
Probab=99.90 E-value=7.2e-22 Score=183.93 Aligned_cols=161 Identities=22% Similarity=0.272 Sum_probs=125.1
Q ss_pred chHHHHHHHHHhhcCCCc----eEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 55 PTRDALESLLAKLDKADR----ALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~----~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
+..+++++.+++++|.++ .+++++|++++.+ +..++++||++++..+.+.+.. +..+++..|.+++.++.+
T Consensus 31 ~~~~~~~~~la~~~~~~~~~~~i~~~~~gt~~l~~~~~~~~~~~~~vi~~~~~~~~~~--~~~~a~~~g~~~~~i~~~~~ 108 (355)
T TIGR03301 31 DVTDQVRDRLLALAGGDDNHTCVLLQGSGTFAVEATIGSLVPRDGKLLVLINGAYGER--LAKICEYLGIPHTDLNFSEY 108 (355)
T ss_pred HHHHHHHHHHHHHhcCCCCCcEEEEeCCcHHHHHHHHHhccCCCCeEEEECCCchhhH--HHHHHHHcCCceEEEecCCC
Confidence 478899999999999862 3356788899875 4556788888776555443321 135566788888887753
Q ss_pred ---CHHHHHhhhC--CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 ---DLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 ---d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.++ ++++++++++++|++|.+.|+++|.++|+++|+++|+|++++.+... +....+.|++++|++|+
T Consensus 109 ~~~d~~~l~~~l~~~~~~~~v~~~~~~~~~G~~~~~~~i~~l~~~~~~~livD~~~s~g~~~~~~~~~~~d~~~~s~~K~ 188 (355)
T TIGR03301 109 EPPDLNRIEEALAADPDITHVATVHHETTTGILNPLEAIAKVARSHGAVLIVDAMSSFGAIPIDIEELDVDALIASANKC 188 (355)
T ss_pred CCCCHHHHHHHHHhCCCceEEEEEecCCcccchhHHHHHHHHHHHcCCEEEEEeccccCCcccchhhcCccEEEecCCcc
Confidence 7899999886 35667888899999999999999999999999999999998876543 33345789999999999
Q ss_pred cccCCCceEEEEEEcChh
Q 016612 202 IAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~ 219 (386)
++|++| .|+++++++.
T Consensus 189 l~~~~G--~g~~~~~~~~ 204 (355)
T TIGR03301 189 LEGVPG--FGFVIARRDL 204 (355)
T ss_pred cccCCc--eeEEEECHHH
Confidence 878777 5999988553
No 207
>PRK11658 UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Provisional
Probab=99.90 E-value=5.2e-21 Score=178.74 Aligned_cols=253 Identities=20% Similarity=0.240 Sum_probs=170.3
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.|...++++.+++++|.+..+.++|||+|+.+ +.++ +++||+|++++++|.++.. .+...|++++.++.+
T Consensus 32 g~~~~~le~~la~~~g~~~~v~~~sgt~al~lal~al~~~~Gd~Viv~~~~~~~~~~----~~~~~G~~~v~vd~~~~~~ 107 (379)
T PRK11658 32 GPKNQALEQAFCQLTGNQHAIAVSSATAGMHITLMALGIGPGDEVITPSLTWVSTLN----MIVLLGATPVMVDVDRDTL 107 (379)
T ss_pred CHhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHcCCCCCCEEEECCCcHHHHHH----HHHHcCCEEEEEecCCCcC
Confidence 36789999999999999989999999999974 4556 7899999999999988853 445689999988753
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC---CCCCCccEEEecccccc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR---PLELGADIVMHSATKFI 202 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~---~~~~~~di~~~S~sK~~ 202 (386)
|++++++++++++++|+ |.|++|...|+++|.++|+++|+++|+|++++.+.... ....+.+++.++.+|.+
T Consensus 108 ~~d~~~l~~~i~~~tkav~---~~~~~G~~~d~~~i~~~a~~~gi~vi~D~a~a~g~~~~~~~~g~~g~~~~Sf~~~K~l 184 (379)
T PRK11658 108 MVTPEAIEAAITPRTKAII---PVHYAGAPADLDAIRAIGERYGIPVIEDAAHAVGTYYKGRHIGARGTAIFSFHAIKNI 184 (379)
T ss_pred CcCHHHHHHhcccCCeEEE---EeCCCCCcCCHHHHHHHHHHcCCeEEEECCCccCCeECCeecCCCCCEEEeCCCCCcC
Confidence 78999999999999988 56679999999999999999999999999998776432 22345556666666877
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhc----------------------C--CCCChhhHHHHHhcCCcHHHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAE----------------------G--SGLAPFDCWICLRGVKTMALRVEKQQ 258 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~----------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (386)
.++ ++|+++.+++++.+.++.....+ | ..++..++++.+..+..+....++..
T Consensus 185 ~~g---~GG~v~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~G~n~~~~~l~AAl~~~ql~~l~~~~~~r~ 261 (379)
T PRK11658 185 TCA---EGGLVVTDDDELADRLRSLKFHGLGVDAFDRQTQGRAPQAEVLTPGYKYNLADINAAIALVQLAKLEALNARRR 261 (379)
T ss_pred ccc---CceEEEECCHHHHHHHHHHHHcCCCcchhhhhcccCCCcceeeccccccCcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 553 47988888777776665443211 0 11333444444444444444444555
Q ss_pred HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC---HHhHHHHHhhcCcceeccCC
Q 016612 259 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVETTKYFSITVSF 328 (386)
Q Consensus 259 ~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~gi~~~~ 328 (386)
++++.+.+.|.+.+. .... .+.... .....++.+.++. ....+++.+.|+..||.++.
T Consensus 262 ~~a~~~~~~L~~~~~---~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~r~~~~~~L~~~gI~~~~ 322 (379)
T PRK11658 262 EIAARYLQALADLPF---QPLS-LPAWPH--------QHAWHLFIIRVDEERCGISRDALMEALKERGIGTGL 322 (379)
T ss_pred HHHHHHHHHhcCCCC---ccCc-CCCCCC--------ceeEEEEEEEECCccccCCHHHHHHHHHHCCCCCcc
Confidence 555555555544321 0000 000000 0011344555532 12466788888888887543
No 208
>cd00378 SHMT Serine-glycine hydroxymethyltransferase (SHMT). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). SHMT carries out interconversion of serine and glycine; it catalyzes the transfer of hydroxymethyl group of N5, N10-methylene tetrahydrofolate to glycine resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers; the mammalian enzyme forms a homotetramer comprising four pyridoxal phosphate-bound active sites.
Probab=99.90 E-value=3.2e-21 Score=182.55 Aligned_cols=286 Identities=21% Similarity=0.191 Sum_probs=178.5
Q ss_pred HHHHHHHHhhcCCCc-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHh-hhcccCCcEEEEeCC--C-----
Q 016612 58 DALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS-RVTPKTGVVVKRVNT--C----- 127 (386)
Q Consensus 58 ~~l~~~l~~~~g~~~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~-~~~~~~g~~~~~v~~--~----- 127 (386)
+..++.+++++|.+. .+++++|++|+. ++.++++|||+|++++|.|+++...+. ..++..|.+++.++. +
T Consensus 68 ~~~~~~~~~~~g~~~~~v~~~sgt~a~~~~l~~l~~~Gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 147 (402)
T cd00378 68 DLAIERAKKLFGAEYANVQPHSGSQANLAVYFALLEPGDTIMGLDLSHGGHLTHGSFTKVSASGKLFESVPYGVDPETGL 147 (402)
T ss_pred HHHHHHHHHHhCCCceeeecCCcHHHHHHHHHHhcCCCCEEEEecCccCccccccccccccccceeEEEecCCcCcccCC
Confidence 335667889999874 456678898886 556688999999999999987643211 124566765554432 2
Q ss_pred -CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc-----cCCCCCCccEEEecccc
Q 016612 128 -DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATK 200 (386)
Q Consensus 128 -d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~-----~~~~~~~~di~~~S~sK 200 (386)
|++++++.+. ++++++++++++|| ...|+++|.++|+++|+++|+|++|..+.. ..+.. +.|++++|+||
T Consensus 148 id~~~l~~~i~~~~~~~v~~~~~~~~--~~~~~~~I~~l~~~~~~~li~D~a~~~g~~~~g~~~~~~~-~~dv~~~s~sK 224 (402)
T cd00378 148 IDYDALEKMALEFKPKLIVAGASAYP--RPIDFKRFREIADEVGAYLLVDMAHVAGLVAGGVFPNPLP-GADVVTTTTHK 224 (402)
T ss_pred cCHHHHHHHHHhCCCCEEEecCcccC--CCcCHHHHHHHHHhcCCEEEEEccchhhhhhcccCCCccc-CCcEEEecccc
Confidence 8999999885 68999999888774 567999999999999999999999754432 22233 67999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCCh-hhHHHH----HhcCC-cHHHHHHHHHHHHHHHHHHHhhCCCc
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP-FDCWIC----LRGVK-TMALRVEKQQDNAQKIAEFLASHPRV 274 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~ 274 (386)
++.|+ ++|+++++++.+.+.+.........+.+. .....+ ..... ....+.++..++.+.+.+.|.+.. +
T Consensus 225 ~l~G~---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~ 300 (402)
T cd00378 225 TLRGP---RGGLILTRKGELAKKINSAVFPGLQGGPHLHVIAAKAVALKEALEPEFKAYAKQVVENAKALAEALKERG-F 300 (402)
T ss_pred CCCCC---CceEEEeccHHHHHHHHHHhCccccCCchHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhCC-C
Confidence 98554 57998887646666554433221111111 111111 11111 233444556666666666666542 1
Q ss_pred ceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 275 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 275 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
.+.. . ...+.++++.+++ .....++.+.+...|+.+..+.. |.....
T Consensus 301 --------------~~~~-~-~~~~~~v~v~~~~~~~~~~~~~~~l~~~gI~v~~~~~------p~~~~~---------- 348 (402)
T cd00378 301 --------------KVVS-G-GTDNHLVLVDLRPKGITGKAAEDALEEAGITVNKNTL------PWDPSS---------- 348 (402)
T ss_pred --------------eEee-c-CCCCeEEEEeCCccCCCHHHHHHHHHHcCcEEcCCcC------CCCCCC----------
Confidence 1110 0 1135777777752 22234555556666776654221 111000
Q ss_pred cCCCCCeEEEEec--------cCChHHHHHHHHHHHhc
Q 016612 354 RGLTEDLVRISVG--------IEDVNDLISDLDKALRT 383 (386)
Q Consensus 354 ~~~~~~~iRis~~--------~~~~~~~i~~l~~~l~~ 383 (386)
......+|++++ .++++.+++.|++.++.
T Consensus 349 -~~~~~~lRi~~~~~~~~~~~~~di~~~~~~l~~~~~~ 385 (402)
T cd00378 349 -PFVPSGIRIGTPAMTTRGMGEEEMEEIADFIARALKD 385 (402)
T ss_pred -CCCCCeeEecCHHHHHhCCCHHHHHHHHHHHHHHHhc
Confidence 112456999884 37788888888877754
No 209
>PRK04311 selenocysteine synthase; Provisional
Probab=99.89 E-value=1.6e-21 Score=184.02 Aligned_cols=212 Identities=24% Similarity=0.326 Sum_probs=158.8
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCC---cHHHHHhhhcccCCcEEEEeCC---CCH
Q 016612 56 TRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYG---GTDRLLSRVTPKTGVVVKRVNT---CDL 129 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~---~~~~~~~~~~~~~g~~~~~v~~---~d~ 129 (386)
....+++.+++++|.++.+++++|++|+.+++..+.+||+|++++..|. +... +....+..|+++++++. .++
T Consensus 128 r~~~~e~~lA~l~Gae~a~vv~sgtaAl~l~l~~l~~GdeVIvs~~e~~~~ggs~~-i~~~~~~~G~~l~~v~~~~~t~~ 206 (464)
T PRK04311 128 RDRALAALLCALTGAEDALVVNNNAAAVLLALNALAAGKEVIVSRGELVEIGGAFR-IPDVMRQAGARLVEVGTTNRTHL 206 (464)
T ss_pred HHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCEEEEcchhhhhcCcchh-hHHHHHHCCcEEEEECCCCCCCH
Confidence 4678999999999999999999999999877777899999999987543 2232 23455788999999986 378
Q ss_pred HHHHhhhCCCceEEEEeCCCCC--Cc--ccccHHHHHHHHHHcCCEEEEeCCCCC------------CCccCCCCCCccE
Q 016612 130 DEVASAIGPWTKLVWVESPTNP--RQ--QICDIRKIAEMAHAHGALLLVDNSIMS------------PVLSRPLELGADI 193 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~np--tG--~~~~l~~i~~la~~~~~~li~D~a~~~------------~~~~~~~~~~~di 193 (386)
++++++++++|++|++++++|+ +| ...|+++|+++|++||+++++|.+++. +...++.+.|+|+
T Consensus 207 ~dle~aI~~~TklV~~vh~sN~~i~G~~~~~dl~eI~~lak~~gi~vivD~gsG~l~~~~~~gl~~~p~~~~~l~~GaDi 286 (464)
T PRK04311 207 RDYEQAINENTALLLKVHTSNYRIEGFTKEVSLAELAALGKEHGLPVVYDLGSGSLVDLSQYGLPDEPTVQELLAAGVDL 286 (464)
T ss_pred HHHHHhcCccCeEEEEEcCCCccccccCCcCCHHHHHHHHHHcCCeEEEECCCcccccchhccCCCCCchhhHHhcCCcE
Confidence 8999999999999999999998 34 567999999999999999999995321 1112344579999
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHH--hhh---hcCCCCChhhHHH-----------HHhcCCcHHHHHHHH
Q 016612 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYF--LQN---AEGSGLAPFDCWI-----------CLRGVKTMALRVEKQ 257 (386)
Q Consensus 194 ~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~--~~~---~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~ 257 (386)
+++|++|+++||. +|+++++++ +.+.++. +.. ..+..+++..+++ ....++.+..+.+++
T Consensus 287 v~fSg~K~LgGp~---~G~i~g~~~-li~~l~~~~~~r~lr~dk~~l~~l~~~l~~~~~~~~~~~~i~~l~~l~~~~~~~ 362 (464)
T PRK04311 287 VTFSGDKLLGGPQ---AGIIVGKKE-LIARLKKHPLKRALRVDKLTLAALEATLRLYLDPEKLAEEIPTLRLLTRSPEEL 362 (464)
T ss_pred EEecCcccccCCc---eEEEEEcHH-HHHHHhhchhHHHHhcchHHHHHHHHHHHHHhChhhhhhhCcHHHHhcCCHHHH
Confidence 9999999998773 799998754 4443431 111 1122333333332 233444567778889
Q ss_pred HHHHHHHHHHHhhCC
Q 016612 258 QDNAQKIAEFLASHP 272 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~ 272 (386)
.++++.+.++|+.+.
T Consensus 363 ~~~A~~la~~L~~~~ 377 (464)
T PRK04311 363 RARAERLAAALKAAL 377 (464)
T ss_pred HHHHHHHHHHHHhcc
Confidence 999999999998764
No 210
>PRK11706 TDP-4-oxo-6-deoxy-D-glucose transaminase; Provisional
Probab=99.89 E-value=2e-20 Score=174.82 Aligned_cols=256 Identities=16% Similarity=0.137 Sum_probs=176.4
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
+.++++++++++++|.++.++++||++|+.+ +.++ +++||+|+++.++|.++. ..+...|++++.++.+
T Consensus 31 ~~~~~~e~~la~~~g~~~~v~~~sgt~al~~~l~~~~~~~Gd~Viv~~~t~~~~~----~~~~~~G~~~v~~d~d~~~~~ 106 (375)
T PRK11706 31 GFTRRCQQWLEQRFGSAKVLLTPSCTAALEMAALLLDIQPGDEVIMPSYTFVSTA----NAFVLRGAKIVFVDIRPDTMN 106 (375)
T ss_pred HHHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHhCCCCCCEEEECCCCcHHHH----HHHHHcCCEEEEEecCCCcCC
Confidence 5789999999999999999999999999875 4444 789999999999999885 4455789999998753
Q ss_pred -CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC--CCCCCccEEEeccc--ccc
Q 016612 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR--PLELGADIVMHSAT--KFI 202 (386)
Q Consensus 128 -d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~--~~~~~~di~~~S~s--K~~ 202 (386)
|++++++.+++++++|+++ |++|...++++|.++|+++|+++|+|++|+.+...+ +.....|+.++|++ |.+
T Consensus 107 ~d~~~le~~i~~~tk~i~~~---~~~G~~~~~~~i~~la~~~~i~vIeD~a~a~g~~~~~~~~g~~~~~~~~Sf~~~K~l 183 (375)
T PRK11706 107 IDETLIEAAITPKTRAIVPV---HYAGVACEMDTIMALAKKHNLFVVEDAAQGVMSTYKGRALGTIGHIGCFSFHETKNY 183 (375)
T ss_pred cCHHHHHHhcCCCCeEEEEe---CCCCCccCHHHHHHHHHHcCCEEEEECccccccccCCeeeecCcCEEEEeCCCCccc
Confidence 7899999999899999965 468999999999999999999999999998776322 22223578888877 998
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhc-------------------CC--CCChhhHHHHHhcCCcHHHHHHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAE-------------------GS--GLAPFDCWICLRGVKTMALRVEKQQDNA 261 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~-------------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (386)
+. |. +|.++++++++.++++.+...+ +. .++..+++.....++.+....++..++.
T Consensus 184 ~~--g~-gG~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~ql~~l~~~~~~R~~~~ 260 (375)
T PRK11706 184 TA--GE-GGALLINDPALIERAEIIREKGTNRSQFFRGQVDKYTWVDIGSSYLPSELQAAYLWAQLEAADRINQRRLALW 260 (375)
T ss_pred cc--cC-CeEEEECCHHHHHHHHHHHHcCCCcchhhccCCCcceeeecccccCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 53 32 4555566677776655544321 11 1234455555555555666666666666
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCC
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFG 329 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G 329 (386)
+.+.+.+.+.+....+..+.. +. .......++++.+++.....++.+.+...||.++..
T Consensus 261 ~~~~~~L~~~~~~~~~~~~~~---~~------~~~~~~~~~~~~~~~~~~r~~l~~~L~~~gI~~~~~ 319 (375)
T PRK11706 261 QRYYDALAPLAEAGRIELPSI---PD------DCKHNAHMFYIKLRDLEDRSALINFLKEAGIMAVFH 319 (375)
T ss_pred HHHHHHhcCCCcCCeeecCCC---CC------CCceeeEEEEEEECCcCCHHHHHHHHHHCCCCcccc
Confidence 666666665431000111111 00 001123455666654445778888888889876543
No 211
>PRK00011 glyA serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=1.5e-21 Score=185.51 Aligned_cols=283 Identities=21% Similarity=0.173 Sum_probs=177.2
Q ss_pred HHHHHhhcCCCce-EEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHh-hhcccCCcEEEEeCC------CCHHH
Q 016612 61 ESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS-RVTPKTGVVVKRVNT------CDLDE 131 (386)
Q Consensus 61 ~~~l~~~~g~~~~-i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~-~~~~~~g~~~~~v~~------~d~~~ 131 (386)
++.+++++|.+.. +++++|++++. ++.++++|||+|+++.|+|+++...+. ......|.+++.++. .|+++
T Consensus 77 ~~~la~~~g~~~~~i~~~sgt~al~~~l~~l~~~gd~Vl~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~ 156 (416)
T PRK00011 77 IDRAKELFGAEYANVQPHSGSQANAAVYFALLKPGDTILGMDLAHGGHLTHGSPVNFSGKLYNVVSYGVDEETGLIDYDE 156 (416)
T ss_pred HHHHHHHhCCCceeeecCCchHHHHHHHHHhcCCCCEEEEeccccCCccccccccccccceeeEeecCcCcccCCcCHHH
Confidence 4488999998844 66678998886 555678999999999999976532211 112344567776654 27899
Q ss_pred HHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc-----cCCCCCCccEEEeccccccccC
Q 016612 132 VASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFIAGH 205 (386)
Q Consensus 132 l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~-----~~~~~~~~di~~~S~sK~~~g~ 205 (386)
+++.++ +++++|+++++++ |...|+++|.++|+++|+++|+|++|+.+.. ..... +.|++++|+||++.|+
T Consensus 157 l~~~i~~~~~k~v~~~~~~~--~~~~~~~~I~~la~~~~~~livD~a~~~g~~~~g~~~~~~~-~~di~~~S~~K~l~g~ 233 (416)
T PRK00011 157 VEKLALEHKPKLIIAGASAY--SRPIDFKRFREIADEVGAYLMVDMAHIAGLVAAGVHPSPVP-HADVVTTTTHKTLRGP 233 (416)
T ss_pred HHHHHHhcCCCEEEECCCcC--CCccCHHHHHHHHHHcCCEEEEECcchhcccccCccCCCCC-CCcEEEecCCcCCCCC
Confidence 999886 4799998875544 5667999999999999999999999875543 22333 6899999999998654
Q ss_pred CCceEEEEEEcChhHHHHHHHhhhhcCCC--CChhhHHHHH---hcC-CcHHHHHHHHHHHHHHHHHHHhhCCCcceEec
Q 016612 206 SDVMAGVLAVKGERLAKELYFLQNAEGSG--LAPFDCWICL---RGV-KTMALRVEKQQDNAQKIAEFLASHPRVKKVNY 279 (386)
Q Consensus 206 ~g~~~G~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 279 (386)
++|+++++++++.+.+.......... .......+.. ..+ ..+..+.++..++++.+.+.|++.. +
T Consensus 234 ---~gg~i~~~~~~~~~~l~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~----- 304 (416)
T PRK00011 234 ---RGGLILTNDEELAKKINSAVFPGIQGGPLMHVIAAKAVAFKEALEPEFKEYAQQVVKNAKALAEALAERG-F----- 304 (416)
T ss_pred ---CceEEEeCCHHHHHHHHHHhCccccCCccHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-C-----
Confidence 57999987666766665443322111 1111111111 111 1234556666777777777776532 1
Q ss_pred CCCCCCCchhhhhhccCCCCceEEEEeCCHH-hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCC
Q 016612 280 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 358 (386)
Q Consensus 280 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 358 (386)
+ +.. ....++++++.+++.. ....+.+.+...|+.++.+.. |..... ...+
T Consensus 305 ---~------~~~--~~~~~~~~~i~~~~~~~~~~~~~~~L~~~GI~v~~~~~------p~~~~~-----------~~~~ 356 (416)
T PRK00011 305 ---R------VVS--GGTDNHLVLVDLRSKGLTGKEAEAALEEANITVNKNAV------PFDPRS-----------PFVT 356 (416)
T ss_pred ---e------eee--cCCCCeEEEEeCcccCCCHHHHHHHHHHcCcEEccCcC------CCCCCC-----------CCCC
Confidence 1 100 0113467777774321 345566677677877653321 100000 0113
Q ss_pred CeEEEEe--------ccCChHHHHHHHHHHHhc
Q 016612 359 DLVRISV--------GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 359 ~~iRis~--------~~~~~~~~i~~l~~~l~~ 383 (386)
..+|++. ..++++.+++.|++++..
T Consensus 357 ~~~Ri~~~~~~~~~~t~~di~~l~~~l~~~~~~ 389 (416)
T PRK00011 357 SGIRIGTPAITTRGFKEAEMKEIAELIADVLDN 389 (416)
T ss_pred CceEecCHHHhhcCcCHHHHHHHHHHHHHHHhc
Confidence 4588854 247788888888777654
No 212
>PRK13238 tnaA tryptophanase/L-cysteine desulfhydrase, PLP-dependent; Provisional
Probab=99.89 E-value=4.1e-21 Score=182.25 Aligned_cols=174 Identities=20% Similarity=0.205 Sum_probs=132.6
Q ss_pred CCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEE
Q 016612 44 NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK 122 (386)
Q Consensus 44 ~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~ 122 (386)
.+...|+.. +...++++.++++++.+.++++++|++|+. ++.++++||| |++++|.|.++. ...+..|.+++
T Consensus 69 ~g~~~Y~~~--~g~~~Lreaia~~~~~~~vv~t~ggt~A~~~~~~all~pGD-Vii~~p~~~~~~----~~i~~~G~~~v 141 (460)
T PRK13238 69 RGDEAYAGS--RSYYRLEDAVKDIFGYPYTIPTHQGRAAEQILFPVLIKKGD-VVPSNYHFDTTR----AHIELNGATAV 141 (460)
T ss_pred hCCcccCCC--CCHHHHHHHHHHHhCCCcEEECCCHHHHHHHHHHHhCCCCC-EEccCCcccchH----HHHHHcCCEEE
Confidence 344567655 345578888888899888888999999987 5566899999 999999888885 33456788887
Q ss_pred EeCC---------------CCHHHHHhhhC----CCceEEEEeCCCCCCc-cccc---HHHHHHHHHHcCCEEEEeCCCC
Q 016612 123 RVNT---------------CDLDEVASAIG----PWTKLVWVESPTNPRQ-QICD---IRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 123 ~v~~---------------~d~~~l~~~~~----~~~~~v~~~~~~nptG-~~~~---l~~i~~la~~~~~~li~D~a~~ 179 (386)
.++. .|+++|++.++ +++++|++++|+||+| .+.+ +++|.++|++||++||+|+++.
T Consensus 142 ~v~~~~~~~~~~~~~f~g~id~e~Le~~i~~~~~~~tk~Ivl~~p~NptGG~v~s~~~l~~I~~ia~~~gi~li~Daa~~ 221 (460)
T PRK13238 142 DLVIDEALDTGSRHPFKGNFDLEKLEALIEEVGAENVPFIVMTITNNSAGGQPVSMANLRAVYEIAKKYGIPVVIDAARF 221 (460)
T ss_pred EEeccccccccccccccCCcCHHHHHHHHhhcCCCceeEEEEecCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECcch
Confidence 7764 37899999987 4799999999999998 6654 7899999999999999999874
Q ss_pred CC-C-c---------cCCC-------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh
Q 016612 180 SP-V-L---------SRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (386)
Q Consensus 180 ~~-~-~---------~~~~-------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~ 227 (386)
.. . + .... ....|++++|.+|.+.++. +|+++++++++.+.++..
T Consensus 222 ~e~a~f~~~~e~g~~~~si~~i~~~~~s~~D~~~~Sg~K~g~~~~---GG~i~~~d~~l~~~~~~~ 284 (460)
T PRK13238 222 AENAYFIKQREPGYKDKSIKEIAREMFSYADGLTMSAKKDAMVNI---GGLLCFRDEDLFTECRTL 284 (460)
T ss_pred hhhhhhhhhccccccCCCHHHHhhhhcccCcEEEEecccCCCCcc---eeEEEcChHHHHHHhhhc
Confidence 31 1 1 1000 1247999999999876653 689988876676666544
No 213
>cd06450 DOPA_deC_like DOPA decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to DOPA/tyrosine decarboxylase (DDC), histidine decarboxylase (HDC), and glutamate decarboxylase (GDC). DDC is active as a dimer and catalyzes the decarboxylation of tyrosine. GDC catalyzes the decarboxylation of glutamate and HDC catalyzes the decarboxylation of histidine.
Probab=99.89 E-value=3.4e-22 Score=185.40 Aligned_cols=270 Identities=18% Similarity=0.151 Sum_probs=178.4
Q ss_pred cccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCcHHHHHH-HHHHhcC------------C--CCEEEecCCCCCcH
Q 016612 48 DYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG------------T--GEEIVAGDDLYGGT 106 (386)
Q Consensus 48 ~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~gt~al~-~~~~~~~------------~--g~~Vlv~~~~~~~~ 106 (386)
.|... +.. +.+++.+++++++|.+ ..+++++||+++. ++.++.. + ++.|+++++.|.++
T Consensus 29 ~y~~~~~~~~le~~~~~~~~~~~g~~~~~~~~~~t~ggt~a~~~al~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~h~~~ 108 (345)
T cd06450 29 TWDESPAATEMEAEVVNWLAKLFGLPSEDADGVFTSGGSESNLLALLAARDRARKRLKAGGGRGIDKLVIVCSDQAHVSV 108 (345)
T ss_pred ccccCchhHHHHHHHHHHHHHHhCCCCCCCCEEEeCChhHHHHHHHHHHHHHhhhhhhcccccccCCeEEEEcCcchhHH
Confidence 36655 443 6888889999998874 5777888888876 4444321 2 34788999999887
Q ss_pred HHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEe
Q 016612 107 DRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 107 ~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D 175 (386)
... ++..|.+++.++.+ |++++++.+++ +++++++++++||+|.+.|+++|.++|+++|+++++|
T Consensus 109 ~~~----~~~~g~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~~~~~~v~~~~~~~~tG~~~~~~~i~~~~~~~~~~l~vD 184 (345)
T cd06450 109 EKA----AAYLDVKVRLVPVDEDGRMDPEALEAAIDEDKAEGLNPIMVVATAGTTDTGAIDPLEEIADLAEKYDLWLHVD 184 (345)
T ss_pred HHH----HHHHhcCeEEeeeCCCCCcCHHHHHHHHHHHHHCCCCcEEEEEecccCCCCCCCCHHHHHHHHHHhCCeEEEe
Confidence 533 34457788887743 89999999876 7889999999999999999999999999999999999
Q ss_pred CCCCCCCccCCC-------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC-
Q 016612 176 NSIMSPVLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV- 247 (386)
Q Consensus 176 ~a~~~~~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 247 (386)
++|+.+...... ..+.|++.+|+||++++|.| +|+++.+ ....+..+..+
T Consensus 185 ~a~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~l~~p~g--~g~~~~~--------------------~~~~~~~l~~l~ 242 (345)
T cd06450 185 AAYGGFLLPFPEPRHLDFGIERVDSISVDPHKYGLVPLG--CSAVLVR--------------------ALKLWATLRRFG 242 (345)
T ss_pred chhhHHHhhChhhHHHhcCccccCEEEEchhHhhCCCcc--hHHHHHH--------------------HHHHHHHHHHHh
Confidence 999866542111 12679999999999877654 6777654 11112211111
Q ss_pred -CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC----HHhHHHHHhhcCcc
Q 016612 248 -KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHVVETTKYF 322 (386)
Q Consensus 248 -~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~l~~~l~~~ 322 (386)
..+..+.++..+.++.+.+.+.+.+.+ .++. +..+++++|.+.. .....++.+.+...
T Consensus 243 ~~g~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~~---~~~~~iv~f~~~~~~~~~~~~~~i~~~L~~~ 305 (345)
T cd06450 243 RDGYGEHIDRIVDLAKYLAELIRADPGF--------------ELLG---EPNLSLVCFRLKPSVKLDELNYDLSDRLNER 305 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCe--------------EEec---CCceeEEEEEECCcchhhHHHHHHHHHHHhc
Confidence 122344455555666666666554321 1110 1235788888755 23455677777666
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccC-ChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-DVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-~~~~~i~~l~~~l~~ 383 (386)
|+....+.. + + .++++|++++.. ...+.++.+.++|++
T Consensus 306 g~~~~~~~~-----~-----------------~-~~~~lRis~~~~~~t~~di~~l~~~l~~ 344 (345)
T cd06450 306 GGWHVPATT-----L-----------------G-GPNVLRFVVTNPLTTRDDADALLEDIER 344 (345)
T ss_pred CCEEEEeeE-----E-----------------C-CeEEEEEEecCCCCCHHHHHHHHHHHHh
Confidence 432211110 0 0 245699999864 477777777777765
No 214
>PLN02724 Molybdenum cofactor sulfurase
Probab=99.89 E-value=1.2e-21 Score=198.38 Aligned_cols=160 Identities=17% Similarity=0.095 Sum_probs=124.6
Q ss_pred hHHHHHHHHHhhcCCC--c-eEEeCcH-HHHHHHHHH-h-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 56 TRDALESLLAKLDKAD--R-ALCFTSG-MAALAAVTH-L-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~-~i~~~~g-t~al~~~~~-~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
..+++++.+++++|++ + .|++++| |+|++.+.. + +++||+|+++...|++.... ...++..|++++.++.+
T Consensus 79 ~~e~aR~~ia~~lga~~~~~~VvFtsnaT~alnlva~~l~~~~gd~Iv~t~~eH~svl~~-~~~a~~~G~~v~~v~~~~~ 157 (805)
T PLN02724 79 TIESARQQVLEYFNAPPSDYACVFTSGATAALKLVGETFPWSSESHFCYTLENHNSVLGI-REYALEKGAAAIAVDIEEA 157 (805)
T ss_pred HHHHHHHHHHHHhCCCccceEEEEeCChHHHHHHHHHHCCCCCCCeEEEeeccccchHHH-HHHHHHcCCeEEeccchhc
Confidence 6888999999999974 3 4666665 599986644 3 68999999998899887754 46667889999888753
Q ss_pred -----------C--HHHHHhhh----------CCCceEEEEeCCCCCCcccccHHHHHHHHHHc--------CCEEEEeC
Q 016612 128 -----------D--LDEVASAI----------GPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--------GALLLVDN 176 (386)
Q Consensus 128 -----------d--~~~l~~~~----------~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--------~~~li~D~ 176 (386)
+ .+++++.+ .+++++|.+++.+|.+|.+.|++.|..+++.. ++++++|.
T Consensus 158 ~~~~~~~~g~~~~~~~~l~~~~~~~l~~~~~~~~~t~LVa~~~vsN~tG~i~pi~~i~~~~~~~~~~~~~~g~~~v~vDa 237 (805)
T PLN02724 158 ANQPTNSQGSVVVKSRGLQRRNTSKLQKREDDGEAYNLFAFPSECNFSGAKFPLDLVKLIKDNQHSNFSKSGRWMVLLDA 237 (805)
T ss_pred cccccccccccccchhhhhhhhhhhhccccccCCCcceEEEEccccCCCCcCCHHHHHHHHHhcccccccCcceEEEeeh
Confidence 1 14455542 24678999999999999999999775555532 36899999
Q ss_pred CCCCCCcc-CCCCCCccEEEeccccccccCCCceEEEEEEcCh
Q 016612 177 SIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 177 a~~~~~~~-~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
+++.|+.+ +..+.++|++++|+|||++||.| .|+++++++
T Consensus 238 aQ~~g~~piDv~~~~~Dfl~~S~HK~~GgP~G--~G~L~vr~~ 278 (805)
T PLN02724 238 AKGCGTSPPDLSRYPADFVVVSFYKIFGYPTG--LGALLVRRD 278 (805)
T ss_pred hhhcCCCCCChhhcCCCEEEEecceeccCCCC--ceEEEEehh
Confidence 99999875 44457899999999999987988 699998854
No 215
>TIGR01814 kynureninase kynureninase. This model describes kynureninase, a pyridoxal-phosphate enzyme. Kynurinine is a Trp breakdown product and a precursor for NAD. In Chlamydia psittaci, an obligate intracellular pathogen, kynureninase makes anthranilate, a Trp precursor, from kynurenine. This counters the tryptophan hydrolysis that occurs in the host cell in response to the pathogen.
Probab=99.89 E-value=1.8e-21 Score=184.03 Aligned_cols=156 Identities=17% Similarity=0.233 Sum_probs=117.7
Q ss_pred HHHHHHHHHhhcCCC-c-eEEeCcHHHHHHHH-HHhcCCC---CEEEecCCCCCcHHHHHhhhcccCCcEE----EEeCC
Q 016612 57 RDALESLLAKLDKAD-R-ALCFTSGMAALAAV-THLLGTG---EEIVAGDDLYGGTDRLLSRVTPKTGVVV----KRVNT 126 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~-~-~i~~~~gt~al~~~-~~~~~~g---~~Vlv~~~~~~~~~~~~~~~~~~~g~~~----~~v~~ 126 (386)
.+++++ + +++|.+ + .++++++|++++.+ .+++++| +.|++++.+|++....|...++..|+++ +.++.
T Consensus 73 ~~~~~~-~-~l~g~~~~~v~~~~~~t~~l~~~~~~~~~~~~~~~~i~~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~~~~ 150 (406)
T TIGR01814 73 DESLLK-L-RLVGAKEDEVVVMNTLTINLHLLLASFYKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLTVEESMVQIEP 150 (406)
T ss_pred hhhhcc-c-cccCCCCCcEEEeCCchHHHHHHHHHhcCCcCCccEEEecCCCCChHHHHHHHHHHhcCCCcccceEEecc
Confidence 334444 4 778876 4 44555556888854 4466664 3688888999987766655566778776 34443
Q ss_pred C-----CHHHHHhhh---CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEec
Q 016612 127 C-----DLDEVASAI---GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHS 197 (386)
Q Consensus 127 ~-----d~~~l~~~~---~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S 197 (386)
. |++++++.+ +++|++|++++++|.+|.+.|+++|.++|+++|+++++|++|+.|..+ +....++|++++|
T Consensus 151 ~~~g~~~~~~l~~~~~~~~~~t~lv~~~~v~~~tG~~~~~~~i~~~~~~~g~~~~vD~aq~~G~~~id~~~~gvD~~~~s 230 (406)
T TIGR01814 151 REEETLRLEDILDTIEKNGDDIAVILLSGVQYYTGQLFDMAAITRAAHAKGALVGFDLAHAVGNVPLDLHDWGVDFACWC 230 (406)
T ss_pred CCCCccCHHHHHHHHHhcCCCeEEEEEeccccccceecCHHHHHHHHHHcCCEEEEEcccccCCcccccccCCCCEEEEc
Confidence 2 677887776 478999999999999999999999999999999999999999998865 3446789999999
Q ss_pred cccccccCCCceEEEEEEc
Q 016612 198 ATKFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~ 216 (386)
+|||+.||+| +|+++.+
T Consensus 231 ~hK~l~g~pG--~~l~v~~ 247 (406)
T TIGR01814 231 TYKYLNAGPG--AGAFVHE 247 (406)
T ss_pred CccccCCCCC--eEEEEeh
Confidence 9999976666 4544433
No 216
>PF01041 DegT_DnrJ_EryC1: DegT/DnrJ/EryC1/StrS aminotransferase family; InterPro: IPR000653 This entry represents a family that are probably all pyridoxal-phosphate-dependent aminotransferase enzymes with a variety of molecular functions. The family includes StsA P72454 from SWISSPROT, StsC P77952 from SWISSPROT and StsS []. The aminotransferase activity was demonstrated for purified StsC protein as the L-glutamine:scyllo-inosose aminotransferase 2.6.1.50 from EC, which catalyses the first amino transfer in the biosynthesis of the streptidine subunit of streptomycin [].; PDB: 2FNI_A 2FNU_A 2FN6_A 2PO3_A 3UWC_A 1O61_B 1O62_B 1O69_B 1B9I_A 1B9H_A ....
Probab=99.89 E-value=2.7e-21 Score=179.86 Aligned_cols=304 Identities=21% Similarity=0.227 Sum_probs=205.9
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh--cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~--~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+..+++|+.+++++|.+.++.++|||.|+.+++.. +++||+|+++..++.++. ..+...|.++++++.+
T Consensus 24 g~~~~~fE~~~a~~~g~~~~~~~~sgt~Al~~al~~l~~~~gdeVi~p~~t~~~~~----~ai~~~G~~pv~~Di~~~~~ 99 (363)
T PF01041_consen 24 GPYVEEFEKEFAEYFGVKYAVAVSSGTSALHLALRALGLGPGDEVIVPAYTFPATA----SAILWAGAEPVFVDIDPETL 99 (363)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHTTGGTTSEEEEESSS-THHH----HHHHHTT-EEEEE-BETTTS
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCChhHHHHHHHHhcCCCcCceEecCCCcchHHH----HHHHHhccEEEEEeccCCcC
Confidence 368999999999999999999999999999865553 679999999999998886 4556899999999864
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCC--CCCccEEEeccc--cc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KF 201 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~--~~~~di~~~S~s--K~ 201 (386)
|++++++++++++++|++.|. .|...++++|.++|+++|++||+|.+++.|...... ..-.|+.++||+ |.
T Consensus 100 ~id~~~~~~~i~~~t~ai~~~h~---~G~~~d~~~i~~~~~~~~i~lIeD~a~a~g~~~~g~~~G~~gd~~~fSf~~~K~ 176 (363)
T PF01041_consen 100 NIDPEALEKAITPKTKAILVVHL---FGNPADMDAIRAIARKHGIPLIEDAAQAFGARYKGRPVGSFGDIAIFSFHPTKI 176 (363)
T ss_dssp SB-HHHHHHHHHTTEEEEEEE-G---GGB---HHHHHHHHHHTT-EEEEE-TTTTT-EETTEETTSSSSEEEEESSTTSS
T ss_pred CcCHHHHHHHhccCccEEEEecC---CCCcccHHHHHHHHHHcCCcEEEccccccCceeCCEeccCCCCceEecCCCCCC
Confidence 899999999999999996654 688889999999999999999999999988754322 234599999974 88
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhc-----------------CCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAE-----------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 264 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (386)
+.... ||+++++++++.+.++.+...+ ...++..++++....++.+..+.++..++++.+
T Consensus 177 i~~ge---GG~v~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~n~rm~~~~AAigl~QL~~L~~~~~~R~~~a~~y 253 (363)
T PF01041_consen 177 ITTGE---GGAVVTNDPELAERARALRNHGRSRDAFRRYRHELPPGYNFRMSELQAAIGLAQLKRLDEIIARRRENAQRY 253 (363)
T ss_dssp S-SSS----EEEEESTHHHHHHHHHHTBTTEETSECSTTEESSSS--B-B-BHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CcCCC---CeeEEecHHHHHHHhhhhhccCcCccccccccccccCCcccccHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 85433 7999999998888776654322 124667788888888988999999999999999
Q ss_pred HHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcCcceeccCCCCcccccccccccc
Q 016612 265 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 342 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~ 342 (386)
.+.|...+.+.....+. .. . ......+.+.+++. ...+.+.+.+...|+..+......+...|....
T Consensus 254 ~~~L~~~~~~~~~~~~~--~~-~--------~~~~~~f~i~~~~~~~~~rd~l~~~L~~~GI~~~~~~~~pl~~~~~~~~ 322 (363)
T PF01041_consen 254 REALAGIPGIKPPPIPD--GA-E--------RSSYYRFPIRLPDEALADRDELVEALRARGIETRPHYPKPLHRQPVYRS 322 (363)
T ss_dssp HHHHTTGTTEEEEGCGT--TT-E--------EBCESSEEEEETCCGCSTHHHHHHHHHHTTBEEBCSTSSCGGGSGGGTT
T ss_pred HHHHhcCCCcccccccc--cc-c--------ccccccccccccccccchHHHHHHHHHHCCCcccccccCchhhhHHHHh
Confidence 99998876432111111 00 0 01122345555543 237788888888888876644223333333221
Q ss_pred C-----CCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 343 H-----ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 343 ~-----~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
. ..++.... +....+.+.+...-.++.++.+.++++
T Consensus 323 ~~~~~~~~~P~ae~----l~~r~l~LP~~~~lt~edv~~I~~~ir 363 (363)
T PF01041_consen 323 YPYYAPGDLPNAER----LSQRLLSLPIHPRLTEEDVDYIAEAIR 363 (363)
T ss_dssp GEEEETSSSHHHHH----HHHHEEEEEHSTTSCHHHHHHHHHHHH
T ss_pred cCccccCCCHHHHH----HHhCeEECcCCCCCCHHHHHHHhhccC
Confidence 1 12332211 112446777666566666777666654
No 217
>TIGR00707 argD acetylornithine and succinylornithine aminotransferases. Members of this family may also act on ornithine, like ornithine aminotransferase (EC 2.6.1.13) (see MEDLINE:90337349) and on succinyldiaminopimelate, like N-succinyldiaminopmelate-aminotransferase (EC 2.6.1.17, DapC, an enzyme of lysine biosynthesis) (see MEDLINE:99175097)
Probab=99.89 E-value=4.7e-21 Score=180.02 Aligned_cols=292 Identities=17% Similarity=0.164 Sum_probs=177.0
Q ss_pred ceeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH
Q 016612 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (386)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~ 88 (386)
.+.+++..+ +.++|..+|.+.++......+. .........+.+.++++.+++++|.++.++++||++++..++.
T Consensus 27 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~~~----~~~~~~~~~~~~~~l~~~la~~~g~~~~~~~~sg~~a~~~a~~ 102 (379)
T TIGR00707 27 KEYLDFVAGIAVNSLGHAHPKLVEALKEQLEKL----VHVSNLYYTEPQEELAEKLVEHSGADRVFFCNSGAEANEAALK 102 (379)
T ss_pred CEEEEcCcchhhccCCCCCHHHHHHHHHHHhhc----cccccccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHH
Confidence 346677643 7789986565554322111111 1111112346799999999999999988899999998864433
Q ss_pred hc----C----CCCEEEecCCCCCcHHHHHhhhc---------ccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 89 LL----G----TGEEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 89 ~~----~----~g~~Vlv~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
++ . +||+|++++|.|+++........ .....++..++..|++++++.+++++++|++++++|+
T Consensus 103 ~~~~~~~~~~~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~v~~~p~~~~ 182 (379)
T TIGR00707 103 LARKYTGDKGKEKKKIIAFENSFHGRTMGALSATGQPKYQKGFEPLVPGFSYAPYNDIESLKKAIDDETAAVIVEPIQGE 182 (379)
T ss_pred HHHHHhhccCCCCCeEEEECCCcCCccHHHHHhcCChhhhccCCCCCCCceeeCCCCHHHHHHHhhhCeeEEEEEccccC
Confidence 22 2 37999999999976542211110 0111233444555899999999888999999888888
Q ss_pred Ccccc----cHHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChhHH
Q 016612 152 RQQIC----DIRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (386)
Q Consensus 152 tG~~~----~l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~ 221 (386)
+|... ++++|.++|+++|+++|+||+|.. +.... ......|++ ++||.++ +|+|+|+++++ +++.
T Consensus 183 ~g~~~~~~~~l~~i~~l~~~~~~~~i~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~--~G~riG~~~~~-~~~~ 257 (379)
T TIGR00707 183 GGVNPASAEFLKALREICKDKDALLIFDEVQTGIGRTGKFFAYEHYGIEPDII--TLAKGLG--GGVPIGATLAK-EEVA 257 (379)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhhhHHhcCCCCCEE--EEccccc--CCcccEEEEEc-HHHH
Confidence 77653 389999999999999999999862 11111 112234554 6799995 47899999987 4565
Q ss_pred HHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC
Q 016612 222 KELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 299 (386)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 299 (386)
+.+.........+.++..+.++..+++.+. ...++..+..+.+.+.+++... . .+.. ..++.|
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~aa~aaL~~~~~~~~~~~~~~~~~~~~~~l~~~~~--~---~~~~----------~~~~~g 322 (379)
T TIGR00707 258 EAFTPGDHGSTFGGNPLACAAALAVLEVIEKERLLENVKEKGDYFKERLEELGK--N---YPNK----------EVRGKG 322 (379)
T ss_pred hhhcCCCCCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--h---CCCC----------ccccCc
Confidence 555432222223455566665554443221 2233444444555555543210 0 0110 112346
Q ss_pred ceEEEEeCCHHhHHHHHhhcCcceeccCC
Q 016612 300 SVLSFLTGSLALSKHVVETTKYFSITVSF 328 (386)
Q Consensus 300 ~~~~~~~~~~~~~~~l~~~l~~~gi~~~~ 328 (386)
.++++.+++. ..++.+.+...|+.+.+
T Consensus 323 ~~~~~~~~~~--~~~~~~~l~~~Gv~v~~ 349 (379)
T TIGR00707 323 LMLGIELEAP--CKDIVKKALEKGLLVNC 349 (379)
T ss_pred eEEEEEecCc--HHHHHHHHHHCCcEEee
Confidence 7788887542 45677777777876554
No 218
>PRK13034 serine hydroxymethyltransferase; Reviewed
Probab=99.89 E-value=1.9e-21 Score=183.41 Aligned_cols=327 Identities=18% Similarity=0.131 Sum_probs=193.3
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC--CCchHHHHHH----HHHhhcCCCceEE-eCcHHHH
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALES----LLAKLDKADRALC-FTSGMAA 82 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~----~l~~~~g~~~~i~-~~~gt~a 82 (386)
+.+.+|+--+++|. +|.+.++...... .....+..+++. |++..+++++ .+++++|.+.+++ ++||+.|
T Consensus 27 ~~~~~~l~~sen~~---~p~v~~a~~~~~~-~~~~~g~~gsr~~~G~~~~~~lE~~~~~~la~l~g~~~alv~~~SG~~A 102 (416)
T PRK13034 27 QQDHLELIASENFT---SPAVMEAQGSVLT-NKYAEGYPGKRYYGGCEFVDEVEALAIERAKQLFGCDYANVQPHSGSQA 102 (416)
T ss_pred HhcCeeecccccCC---CHHHHHHhcchhh-cCCCCCCCCCcccCCChHHHHHHHHHHHHHHHHhCCCceEEecCCcHHH
Confidence 34555555467774 4444443221110 011223445565 6778899998 9999999998865 5899988
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhccc--CCc--EEEEeCC------CCHHHHHhhhC-CCceEEEEeCCCC
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGV--VVKRVNT------CDLDEVASAIG-PWTKLVWVESPTN 150 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~--~g~--~~~~v~~------~d~~~l~~~~~-~~~~~v~~~~~~n 150 (386)
+. ++.++++|||+|++++..|.+... .-++. .+. +...++. .|++++++.+. .++++|+++.+.
T Consensus 103 ~~~~l~al~~~GD~Vl~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~klVi~~~~~- 178 (416)
T PRK13034 103 NGAVYLALLKPGDTILGMSLSHGGHLT---HGAKVSLSGKWYNAVQYGVDRLTGLIDYDEVEELAKEHKPKLIIAGFSA- 178 (416)
T ss_pred HHHHHHHhcCCCCEEEEcCccceeeee---cCCcceeccceeeeEEcccccccCCcCHHHHHHHHhhcCCeEEEECCCc-
Confidence 76 667789999999999999977321 00110 111 1123322 48899998875 478888876554
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHH
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~ 226 (386)
.|...|+++|.++|+++|+++++|++|+.|....... .++|++++|+||+++|+. +|+++++++.+.+.++.
T Consensus 179 -~g~~~dl~~l~~la~~~g~~livD~Aha~G~~~~g~~~~~~~~~Di~~~s~~K~l~g~~---GG~v~~~~~~~~~~~~~ 254 (416)
T PRK13034 179 -YPRELDFARFREIADEVGALLMVDMAHIAGLVAAGEHPNPFPHAHVVTTTTHKTLRGPR---GGMILTNDEEIAKKINS 254 (416)
T ss_pred -cccccCHHHHHHHHHHcCCEEEEeCcccccCcccCCCCCCCCCceEEEEeCcccCCCCC---CeEEEECcHHHHHHHHh
Confidence 4788899999999999999999999988766532211 257999999999997765 58888877666555443
Q ss_pred hhhhc--CCCCChhhHHHHHhcCC----cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc
Q 016612 227 LQNAE--GSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS 300 (386)
Q Consensus 227 ~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~ 300 (386)
..... +....+..+.+.....+ ....+.++..++++.+.+.|++.. ++-.. +...++
T Consensus 255 ~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~l~~~a~~l~~~L~~~G---------~~~~~--------~~~~t~ 317 (416)
T PRK13034 255 AVFPGLQGGPLMHVIAAKAVAFGEALQPEFKTYAKQVIANAQALAEVLKERG---------YDLVS--------GGTDNH 317 (416)
T ss_pred hcCCcccCCccHHHHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHcC---------CEecc--------CCCCCc
Confidence 32211 11112222222111111 112335667777777777776542 11100 012356
Q ss_pred eEEEEeCCHH-hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--------CChH
Q 016612 301 VLSFLTGSLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVN 371 (386)
Q Consensus 301 ~~~~~~~~~~-~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--------~~~~ 371 (386)
++.+.+.+.. ....+.+.|...|+.++.-....-..+|. -+..+|+|++. ++++
T Consensus 318 i~~v~~~~~~~~~~~~~~~L~~~GI~v~~~~~p~~~~~p~-----------------~~~~lR~~~~~~t~~~~~~~di~ 380 (416)
T PRK13034 318 LLLVDLRPKGLSGKDAEQALERAGITVNKNTVPGDTESPF-----------------VTSGIRIGTPAGTTRGFGEAEFR 380 (416)
T ss_pred EEEEEcCCCCCCHHHHHHHHHhCCcEEeccCCCCCCcCCC-----------------CCCeeEeCcHHHHhCCCCHHHHH
Confidence 6777664432 33445456666666543210000011121 13459999754 6666
Q ss_pred HHHHHHHHHHh
Q 016612 372 DLISDLDKALR 382 (386)
Q Consensus 372 ~~i~~l~~~l~ 382 (386)
++++.|.+++.
T Consensus 381 ~l~~~l~~~~~ 391 (416)
T PRK13034 381 EIANWILDVLD 391 (416)
T ss_pred HHHHHHHHHHh
Confidence 77777666654
No 219
>TIGR03812 tyr_de_CO2_Arch tyrosine decarboxylase MnfA. Members of this protein family are the archaeal form, MnfA, of tyrosine decarboxylase, and are involved in methanofuran biosynthesis. Members show clear homology to the Enterococcus form, Tdc, that is involved in tyrosine decarboxylation for resistance to acidic conditions.
Probab=99.88 E-value=9.7e-21 Score=177.52 Aligned_cols=276 Identities=16% Similarity=0.072 Sum_probs=174.7
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHHhc------CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL------GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~~~------~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
...+++++.+++++|.+ ..+++++|++++. ++.++. ++||+|++++++|.++. ..++..|++++.++
T Consensus 59 ~~~~~~~~~la~~~g~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~vl~~~~~h~~~~----~~~~~~G~~~~~v~ 134 (373)
T TIGR03812 59 KIEEEVVGSLGNLLHLPDAYGYIVSGGTEANIQAVRAAKNLAREEKRTPNIIVPESAHFSFE----KAAEMLGLELRYAP 134 (373)
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEeccHHHHHHHHHHHHHHHHhccCCCcEEEECCcchHHHH----HHHHHcCCeEEEEe
Confidence 35688999999999986 4577777887764 333332 46789999999998764 45667899998887
Q ss_pred CC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-----------CCCCC
Q 016612 126 TC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----------RPLEL 189 (386)
Q Consensus 126 ~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-----------~~~~~ 189 (386)
.+ |++++++.+++++..+++..++||+|.+.|+++|.++|+++|+++++|++|+.+... +....
T Consensus 135 ~~~~~~~d~~~l~~~l~~~~~~vv~~~~~~~tG~~~~~~~i~~l~~~~~~~livD~a~~~~~~~~~~~~~~~~~~d~~~~ 214 (373)
T TIGR03812 135 LDEDYTVDVKDVEDLIDDNTIGIVGIAGTTELGQIDDIEELSKIALENGIYLHVDAAFGGFVIPFLKKGYNPPPFDFSLP 214 (373)
T ss_pred eCCCCCcCHHHHHHHHhhCcEEEEEECCCCCCCccCCHHHHHHHHHHcCCeEEEEcCchhHHHHHHhcCCCCCCccccCC
Confidence 53 899999999877755555568999999999999999999999999999999744321 11123
Q ss_pred CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh-cCC-------CCChhhHHHHHhcCCc-----HHHHHHH
Q 016612 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGS-------GLAPFDCWICLRGVKT-----MALRVEK 256 (386)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~-~~~-------~~~~~~~~~~~~~~~~-----~~~~~~~ 256 (386)
+.|.+.+|.+||..++. ++|+++..++++.+.+...... ... ..+......+...++. +....++
T Consensus 215 ~~d~~~~s~~K~~~~~~--~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~gt~~~~~~~~~~~~l~~l~~~g~~~~~~~ 292 (373)
T TIGR03812 215 GVQSITIDPHKMGLSPI--PAGGILFRSKSYLKYLSVDAPYLTVKKQATITGTRSGASAAATYAVIKYLGREGYRKIVAE 292 (373)
T ss_pred CCCEEEECccccCCCcC--CceEEEEeCHHHHhhhcccCcccCCCCCcceEeechhHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 67899999999765443 3555544445554443211111 000 1111222222222221 1223444
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLIS 336 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~ 336 (386)
..++.+.+.+.+++.+. .... ....+++.+.+++. ..+.+.|...|+.++.+.
T Consensus 293 ~~~~~~~l~~~L~~~g~--~~~~----------------~~~~~~v~~~~~~~---~~v~~~L~~~gi~v~~~~------ 345 (373)
T TIGR03812 293 CMENTRYLVEELKKIGF--EPVI----------------EPVLNIVAFEVDDP---EEVRKKLRDRGWYVSVTR------ 345 (373)
T ss_pred HHHHHHHHHHHHHhCCC--eEEc----------------CCCceEEEEEeCCH---HHHHHHHHHCCceeccCC------
Confidence 55555566666554421 0010 11346777776543 356666666676554321
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 337 MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 337 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.++++|+|++...+++.++.+.++|++
T Consensus 346 --------------------~~~~iRis~~~~~t~edid~l~~~L~~ 372 (373)
T TIGR03812 346 --------------------CPKALRIVVMPHVTREHIEEFLEDLKE 372 (373)
T ss_pred --------------------CCCEEEEEEECCCCHHHHHHHHHHHhh
Confidence 145699999877777777777777654
No 220
>KOG0634 consensus Aromatic amino acid aminotransferase and related proteins [Amino acid transport and metabolism]
Probab=99.88 E-value=3.5e-21 Score=170.87 Aligned_cols=302 Identities=16% Similarity=0.167 Sum_probs=185.0
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
..++|+.. |.| ++..+.+.....+.. + +.+++++.|.++. ++..++++||+|++...+|++.. ...+.
T Consensus 92 ~alQYg~s~G~peLl~fik~h~~~~ih~p~~~~wdiiit~G~t~~l~~~l~~~~N~gd~vlie~~ty~~AL----~s~~a 167 (472)
T KOG0634|consen 92 RALQYGQSSGIPELLLFIKDHNRPTIHAPPYKNWDIIITNGNTDGLFKVLRTLINRGDHVLIEEYTYPSAL----QSMEA 167 (472)
T ss_pred hhhccccccCcHHHHHHHHHhccccccCCCCCCceEEEecCCchHHHHHHHHhhcCCCceEEecccchHHH----Hhccc
Confidence 45788887 877 455555533312211 2 4666666679987 55668999999999999998775 66778
Q ss_pred CCcEEEEeCCC----CHHHHHhhhC---------CCceEEEE-eCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCC
Q 016612 117 TGVVVKRVNTC----DLDEVASAIG---------PWTKLVWV-ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 117 ~g~~~~~v~~~----d~~~l~~~~~---------~~~~~v~~-~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~ 179 (386)
.|+.++.|+++ +++.|++.+. +++++++. ...+||||..++ .++|.++|++|+++||+||.|.
T Consensus 168 ~gv~~ipv~md~~Gi~pE~l~~il~~w~~~~~k~~~p~vlYTIPTgqNPTG~tls~errk~iy~LArKyDfLIVeDdpYy 247 (472)
T KOG0634|consen 168 LGVKIIPVKMDQDGIDPESLEEILSNWKPGSYKKPKPHVLYTIPTGQNPTGNTLSLERRKKIYQLARKYDFLIVEDDPYY 247 (472)
T ss_pred cCceEEeccccCCCCCHHHHHHHHhcCCcccccCCCCeEEEeCcCCCCCCCCccCHHHHHHHHHHHHHcCEEEEecCccc
Confidence 99999999986 7888888774 24666665 578999999986 5789999999999999999975
Q ss_pred CCCc------------------------cCC---CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcC
Q 016612 180 SPVL------------------------SRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 232 (386)
Q Consensus 180 ~~~~------------------------~~~---~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~ 232 (386)
.-.+ .+. ...|.+|-..||||.+ +| |+|.||+.+++..+.+.+.... ...
T Consensus 248 ~Lq~~~y~~~~~~~~p~~s~~~f~k~l~~sflslDtdGrVIr~dSFSKii-aP-GlRlG~it~~~~~l~ril~~ae-~~t 324 (472)
T KOG0634|consen 248 FLQMNTYNPSLELESPAHSSSMFLKSLVPSFLSLDTDGRVIRNDSFSKII-AP-GLRLGWITGNSLFLKRILDLAE-VAT 324 (472)
T ss_pred eeeccccCCCccccCccccHHHHHHhhcCCcccccccccEEeccchhhhh-cC-cceeEEeecCHHHHHHHhhhcc-eee
Confidence 2110 011 1236679999999998 43 7999999998655555444332 222
Q ss_pred CCCChhhHHHHHhcCCcH---------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEE
Q 016612 233 SGLAPFDCWICLRGVKTM---------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 303 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 303 (386)
.+.+..++..+-..++.+ ......+......+...+.+. ++.. +..-.++..|-++|
T Consensus 325 ~~pSg~sq~iv~a~l~~wgqeG~~~wi~~l~~~Yt~Rrn~~l~Al~ky----------lp~~----~~~~~~P~aGmFiw 390 (472)
T KOG0634|consen 325 SGPSGFSQGIVYAMLKRWGQEGFLRWIQHLRSSYTERRNALLSALDKY----------LPKS----VCEYHPPKAGMFIW 390 (472)
T ss_pred cCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------CCCC----eeEEecCCcceEEE
Confidence 334444443332222211 111112222222233333321 1111 00011233567778
Q ss_pred EEeC--------CHH-hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChH
Q 016612 304 FLTG--------SLA-LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVN 371 (386)
Q Consensus 304 ~~~~--------~~~-~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~ 371 (386)
++++ +.. ..+.+...+.++|+....|..+... |... .+.-++|++++. ++.+
T Consensus 391 v~i~~~~~~~~~~i~q~~e~i~~~~vk~gV~~v~G~~F~v~--p~~s--------------~~kiffRls~a~a~~e~l~ 454 (472)
T KOG0634|consen 391 VEIPYINFDTKKSINQIEEIIFIKAVKNGVKLVCGSWFMVD--PESS--------------WSKIFFRLSIAFAEPEKLD 454 (472)
T ss_pred EEecccccccccchHHHHHHHHHHHHHCCeEEecCceeEEc--CccC--------------CCcceEEEEeecCCHHHHH
Confidence 8874 322 4455666667778887777764422 2110 012479999986 5555
Q ss_pred HHHHHHHHHHhc
Q 016612 372 DLISDLDKALRT 383 (386)
Q Consensus 372 ~~i~~l~~~l~~ 383 (386)
+.++++..++++
T Consensus 455 ~g~~rf~~~ike 466 (472)
T KOG0634|consen 455 EGIERFGSVIKE 466 (472)
T ss_pred HHHHHHHHHHHH
Confidence 555666666654
No 221
>PRK13520 L-tyrosine decarboxylase; Provisional
Probab=99.88 E-value=1.5e-20 Score=176.21 Aligned_cols=163 Identities=19% Similarity=0.137 Sum_probs=125.5
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhc----CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~----~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..+++++++++++|.+ ..+++++|++++.. +..+. ++||+|+++++.|.++. ..++..|++++.++.+
T Consensus 60 ~~~~~~~~la~~~g~~~~~~~~~~ggt~a~~~a~~~~~~~~~~~~~~vl~~~~~h~s~~----~~~~~~g~~~~~v~~~~ 135 (371)
T PRK13520 60 LEEEAVEMLGELLHLPDAYGYITSGGTEANIQAVRAARNLAKAEKPNIVVPESAHFSFD----KAADMLGVELRRAPLDD 135 (371)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEecCcHHHHHHHHHHHHhhccCCCceEEecCcchHHHH----HHHHHcCceEEEecCCC
Confidence 4678999999999976 35777778888754 33333 35789999999997764 5556778888888753
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc--------CCCCCCccEEE
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS--------RPLELGADIVM 195 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~--------~~~~~~~di~~ 195 (386)
|++++++++++++++|++.+++|++|.+.|+++|.++|+++|+++++|++|+.+..+ +....+.|.+.
T Consensus 136 ~~~~d~~~l~~~i~~~~~~vi~~~~~~~tG~~~~l~~I~~l~~~~g~~livD~a~~~~~~~~~~~~~~~~~~~~~vd~~~ 215 (371)
T PRK13520 136 DYRVDVKAVEDLIDDNTIGIVGIAGTTELGQVDPIPELSKIALENGIFLHVDAAFGGFVIPFLDDPPNFDFSLPGVDSIT 215 (371)
T ss_pred CCcCCHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHcCCCEEEEecchhHHHHhhcCCCCccccCCCCceEE
Confidence 899999999888888888889999999999999999999999999999999754321 11124679999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHH
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~~~~ 224 (386)
+|.+|+..++. ++|+++..++.+.+.+
T Consensus 216 ~s~~K~~~a~~--~~G~~~~~~~~~~~~l 242 (371)
T PRK13520 216 IDPHKMGLAPI--PAGGILFRDESYLDAL 242 (371)
T ss_pred ECCccccCccC--CceEEEEcCHHHHHhh
Confidence 99999875443 4677776666554443
No 222
>PRK10534 L-threonine aldolase; Provisional
Probab=99.88 E-value=7.7e-21 Score=175.29 Aligned_cols=273 Identities=19% Similarity=0.216 Sum_probs=171.3
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC-CcEEEEeCCC---
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTC--- 127 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~--- 127 (386)
+++...++++.+++++|.+..+++++|++++. .+..++.+||+|+++.|.|...... ...... +.+++.++.+
T Consensus 32 ~~~~~~~L~~~la~~~g~~~~~v~~~g~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 109 (333)
T PRK10534 32 DDPTVNALQDYAAELSGKEAALFLPTGTQANLVALLSHCERGEEYIVGQAAHNYLYEA--GGAAVLGSIQPQPIDAAADG 109 (333)
T ss_pred CCHHHHHHHHHHHHHhCCCeEEEeCchHHHHHHHHHHhcCCCCeeEEechhhhhHhcC--CchHHhcCceEEeecCCCCC
Confidence 34688899999999999998889999987764 5666789999999988877432210 001122 3566666432
Q ss_pred --CHHHHHhhhCC------CceEEEEeCCCCCCcccccH---HHHHHHHHHcCCEEEEeCCCCCCCc---cCC---CCCC
Q 016612 128 --DLDEVASAIGP------WTKLVWVESPTNPRQQICDI---RKIAEMAHAHGALLLVDNSIMSPVL---SRP---LELG 190 (386)
Q Consensus 128 --d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l---~~i~~la~~~~~~li~D~a~~~~~~---~~~---~~~~ 190 (386)
|++++++++++ ++++|++++|+ +|.+.+. ++|.++|+++++++++||+|..... ... ....
T Consensus 110 ~~d~~~l~~~i~~~~~~~~~~~lv~l~np~--~G~v~~~~~l~~i~~~~~~~~~~lvvDEA~~~~~~~~~~~~~~~~~~~ 187 (333)
T PRK10534 110 TLPLDKVAAKIKPDDIHFARTRLLSLENTH--NGKVLPREYLKQAWEFTRERNLALHVDGARIFNAVVAYGCELKEITQY 187 (333)
T ss_pred CCCHHHHHHhhcccCcCcccceEEEEecCC--CCeecCHHHHHHHHHHHHHcCCeEEeeHHHHHHHHHHcCCCHHHHHhc
Confidence 79999998865 68999999766 4999875 5567789999999999998653211 101 0113
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCC--ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 268 (386)
.|.++.|+||.++.+ .||+++++ +++.+.+..+....+... ....+.+....++....++++..++.+.+.+.|
T Consensus 188 ~~~~~~s~SK~~~~~---~G~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~r~~l~~~L 263 (333)
T PRK10534 188 CDSFTICLSKGLGTP---VGSLLVGN-RDYIKRARRWRKMTGGGMRQAGILAAAGLYALKHNVARLQEDHDNAAWLAEQL 263 (333)
T ss_pred CCEEEEEeEcCCCCc---ccceEEcC-HHHHHHHHHHHHHhCCchhhHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHH
Confidence 465566899988543 23467664 567666665554333222 223333333334332233333344455566666
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCH
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPV 348 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~ 348 (386)
++.. + .++ ++.++++++.+++. ....+.+.+...|+.+++|..
T Consensus 264 ~~~g---------~------~~~----~~~~nfv~~~~~~~-~~~~~~~~l~~~gi~v~~~~~----------------- 306 (333)
T PRK10534 264 REAG---------A------DVM----RQDTNMLFVRVGEE-QAAALGEYMRERNVLINASPI----------------- 306 (333)
T ss_pred HhCC---------C------ccC----CCCceEEEEECCch-hHHHHHHHHHHcCeeecCCce-----------------
Confidence 5432 1 111 22467888887642 356677788888888766532
Q ss_pred HHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHh
Q 016612 349 EVRQARGLTEDLVRISV----GIEDVNDLISDLDKALR 382 (386)
Q Consensus 349 ~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~ 382 (386)
+|++. +.++++++++.|++.+.
T Consensus 307 ------------~rl~~~~r~t~e~~~~~~~~l~~~~~ 332 (333)
T PRK10534 307 ------------VRLVTHLDVSREQLAEVVAHWRAFLA 332 (333)
T ss_pred ------------EEEEEEeCCCHHHHHHHHHHHHHHhc
Confidence 56654 35777777777776654
No 223
>PRK00854 rocD ornithine--oxo-acid transaminase; Reviewed
Probab=99.88 E-value=2.4e-20 Score=176.35 Aligned_cols=282 Identities=18% Similarity=0.180 Sum_probs=181.4
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhc----------CCC-CEEEecCCCCCcHHHHHhhh---------
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL----------GTG-EEIVAGDDLYGGTDRLLSRV--------- 113 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~----------~~g-~~Vlv~~~~~~~~~~~~~~~--------- 113 (386)
.+...++++.++++++.+..++++||++|+.+++.++ .+| ++|++....|++.......+
T Consensus 82 ~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~al~~a~~~~~~~~g~~~~~~~vi~~~~~~HG~~~~~~~~~~~~~~~~~ 161 (401)
T PRK00854 82 NDQLAPLYEELAALTGSHKVLPMNSGAEAVETAIKAVRKWGYEVKGVPEGQAEIIVCADNFHGRTLSIVGFSTDPDARGG 161 (401)
T ss_pred CHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCceEEEECCCcCCccHHHHhccCCcccccc
Confidence 3578889999999999889999999999986444322 123 57776666665542221111
Q ss_pred cccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc----
Q 016612 114 TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---- 184 (386)
Q Consensus 114 ~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~---- 184 (386)
.......+..++..|++++++.+.+++++|++++++||+|.+.| +++|.++|++||+++|+||+|+ .+...
T Consensus 162 ~~~~~~~~~~~~~~d~~~le~~i~~~~~aii~e~~~~~~G~~~~~~~~l~~l~~l~~~~gi~lI~DEv~~g~g~~g~~~~ 241 (401)
T PRK00854 162 FGPFTPGFRVVPFGDAEALEAAITPNTVAFLVEPIQGEAGVIIPPAGYFTRVRELCTANNVTLILDEIQTGLGRTGKLLA 241 (401)
T ss_pred CCCCCCCeEEeCCCCHHHHHHHhCCCeEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCchHhH
Confidence 11122345667778999999999989999999999999999986 9999999999999999999997 32221
Q ss_pred -CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHH
Q 016612 185 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNA 261 (386)
Q Consensus 185 -~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 261 (386)
.......|+++. +|++++ +.+++|++++++ ++.+.+.........+.++..+++...+++.+.. ..+...+..
T Consensus 242 ~~~~g~~~D~~~~--~K~l~g-g~~~ig~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aa~~a~L~~l~~~~~~~~~~~~~ 317 (401)
T PRK00854 242 EEHEGIEADVTLI--GKALSG-GFYPVSAVLSNS-EVLGVLKPGQHGSTFGGNPLACAVARAALKVLTEEGMIENAAEMG 317 (401)
T ss_pred HhhcCCCCCEEEe--cccccC-CccCeEEEEEcH-HHHhcccCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 112235688775 699965 335799999874 4544443222222234566677766666654432 223333344
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe-CCHHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
+.+.+.|++... . . ....++.+.++.+.+ ++......+.+.+...|+.+...
T Consensus 318 ~~l~~~L~~~~~------~---------~-~~~~~g~g~~~~i~~~~~~~~~~~~~~~L~~~GV~v~~~----------- 370 (401)
T PRK00854 318 AYFLEGLRSIRS------N---------I-VREVRGRGLMLAVELEPEAGGARQYCEALKERGLLAKDT----------- 370 (401)
T ss_pred HHHHHHHHhhcc------C---------c-eEEEeccceEEEEEEecCchhHHHHHHHHHHCCeEEecC-----------
Confidence 444444443210 0 0 011245677888766 33334567777777778765321
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHh
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALR 382 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~ 382 (386)
..+++|+++. .++++++++.|++++.
T Consensus 371 ----------------~~~~lR~~p~~~~t~e~i~~~i~~l~~~l~ 400 (401)
T PRK00854 371 ----------------HDHTIRLAPPLVITREQVDWALEQIAKVLA 400 (401)
T ss_pred ----------------CCCEEEEeCCcccCHHHHHHHHHHHHHHhh
Confidence 1356999975 3677777777777654
No 224
>COG0075 Serine-pyruvate aminotransferase/archaeal aspartate aminotransferase [Amino acid transport and metabolism]
Probab=99.87 E-value=5e-20 Score=166.46 Aligned_cols=288 Identities=20% Similarity=0.219 Sum_probs=200.2
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
.+.+++.+.+..+++.+ + .++.+|||.++. ++..+++|||+||+...+.++.. |..+++.+|.+++.++..
T Consensus 38 ~~~~~~~~~L~~v~~t~~~~~~ll~gsGt~amEAav~sl~~pgdkVLv~~nG~FG~R--~~~ia~~~g~~v~~~~~~wg~ 115 (383)
T COG0075 38 GIMKEVLEKLRKVFGTENGDVVLLSGSGTLAMEAAVASLVEPGDKVLVVVNGKFGER--FAEIAERYGAEVVVLEVEWGE 115 (383)
T ss_pred HHHHHHHHHHHHHhcCCCCcEEEEcCCcHHHHHHHHHhccCCCCeEEEEeCChHHHH--HHHHHHHhCCceEEEeCCCCC
Confidence 46788888999999977 3 445578889986 56779999999998877665543 468999999999988764
Q ss_pred --CHHHHHhhhC--CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc-cCCCCCCccEEEecccccc
Q 016612 128 --DLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-SRPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 --d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~-~~~~~~~~di~~~S~sK~~ 202 (386)
|+++++++++ ++.++|.+.|....||...|+++|+++|++||.++|+|.+.+.|.. .+..+++.|+++.+.+|.+
T Consensus 116 ~v~p~~v~~~L~~~~~~~~V~~vH~ETSTGvlnpl~~I~~~~k~~g~l~iVDaVsS~Gg~~~~vd~wgiDv~itgSQK~l 195 (383)
T COG0075 116 AVDPEEVEEALDKDPDIKAVAVVHNETSTGVLNPLKEIAKAAKEHGALLIVDAVSSLGGEPLKVDEWGIDVAITGSQKAL 195 (383)
T ss_pred CCCHHHHHHHHhcCCCccEEEEEeccCcccccCcHHHHHHHHHHcCCEEEEEecccCCCcccchhhcCccEEEecCchhc
Confidence 9999999998 5688999999999999999999999999999999999999987654 4677899999999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHH---------------HHhhh-hcCCCCChhhHHH-HHhcC-----CcHHHHHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAKEL---------------YFLQN-AEGSGLAPFDCWI-CLRGV-----KTMALRVEKQQDN 260 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~---------------~~~~~-~~~~~~~~~~~~~-~~~~~-----~~~~~~~~~~~~~ 260 (386)
++|+| .|++..+++.+.... ..+.. ......++..... +..++ +.+..+.++++.+
T Consensus 196 ~~PPG--la~v~~S~~a~e~~~~~~~~~~ylDL~~~~~~~~~~~~~p~Tppv~~i~aL~~al~~i~~EGle~r~~RH~~~ 273 (383)
T COG0075 196 GAPPG--LAFVAVSERALEAIEERKHPSFYLDLKKWLKYMEKKGSTPYTPPVNLIYALREALDLILEEGLEARIARHRRL 273 (383)
T ss_pred cCCCc--cceeEECHHHHHHHhcCCCCceeecHHHHHHHHhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 99999 588888865443211 11111 1111222222222 22222 2346677777888
Q ss_pred HHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC-ceEEEEeCCHHhHHHHH-hhcCcceeccCCCCcccccccc
Q 016612 261 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLALSKHVV-ETTKYFSITVSFGSVKSLISMP 338 (386)
Q Consensus 261 ~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~l~-~~l~~~gi~~~~G~~~~~~~~p 338 (386)
.+.+.+.++... |+-. . ++...+ .+.++..+......++. ..++.+++.+..|..
T Consensus 274 ~~a~r~~~~alG---------l~~~------~-~~~~~s~tvta~~~P~g~~~~~~~~~~~~~~g~~i~gg~~------- 330 (383)
T COG0075 274 AEALRAGLEALG---------LELF------A-DPERRSPTVTAIKVPEGVDDKKVRRALLKEYGVEIAGGQG------- 330 (383)
T ss_pred HHHHHHHHHHcC---------Cccc------c-CcccCCCceEEEECCCCCCcHHHHHHHHHhCCEEeccccc-------
Confidence 888888888653 2111 1 111122 34455554332222222 344455666555442
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEe-c---cCChHHHHHHHHHHHhcCC
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISV-G---IEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~-~---~~~~~~~i~~l~~~l~~~~ 385 (386)
.....++||+- | .+++...+..|+++|++.+
T Consensus 331 ----------------~l~gkifRIGhMG~~~~~dv~~~l~ale~~L~~~g 365 (383)
T COG0075 331 ----------------PLKGKIFRIGHMGNVRPEDVLAALAALEAALRELG 365 (383)
T ss_pred ----------------ccCccEEEEecCccCCHHHHHHHHHHHHHHHHHcC
Confidence 12346699985 4 4888899999999998764
No 225
>PRK01278 argD acetylornithine transaminase protein; Provisional
Probab=99.87 E-value=6.5e-21 Score=179.39 Aligned_cols=320 Identities=15% Similarity=0.182 Sum_probs=194.6
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~ 88 (386)
+.+++..+ +.++|..+|.+.++......+. ...+.. ..+...++++.++++.+.+++++++||++|+.+++.
T Consensus 32 ~~lD~~~g~~~~~lGh~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~~~al~ 106 (389)
T PRK01278 32 RYLDFASGIAVNSLGHAHPHLVEALKEQAEKL-----WHVSNLYRIPEQERLAERLVENSFADKVFFTNSGAEAVECAIK 106 (389)
T ss_pred EEEECCccHhhccCCCCCHHHHHHHHHHHHhc-----CccccccCChHHHHHHHHHHhhCCCCEEEEcCCcHHHHHHHHH
Confidence 45565532 5678887777665422221110 011111 346778899999998877788999999999864332
Q ss_pred -h----cCCCC----EEEecCCCCCcHHHHHhhhccc------C---CcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 89 -L----LGTGE----EIVAGDDLYGGTDRLLSRVTPK------T---GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 89 -~----~~~g~----~Vlv~~~~~~~~~~~~~~~~~~------~---g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
+ .++|| +|++.++.|+++.......... . ...+..++..|++++++.+++++++|++++++|
T Consensus 107 ~ar~~~~~~G~~~r~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~avivep~~~ 186 (389)
T PRK01278 107 TARRYHYGKGHPERYRIITFEGAFHGRTLATIAAGGQEKYLEGFGPLVPGFDQVPFGDIEALKAAITPNTAAILIEPIQG 186 (389)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCcCCCcHHHHhccCChhhcccCCCCCCCceEeCCCCHHHHHHhhCCCeEEEEEecccC
Confidence 2 45666 8999999998774332211100 0 011334555699999999988999999999999
Q ss_pred CCcccc----cHHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChhH
Q 016612 151 PRQQIC----DIRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (386)
Q Consensus 151 ptG~~~----~l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~ 220 (386)
++|... .+++|.++|++||+++|+||+|.. +.... ......|+ .|++|.++ +|+++|++++++ ++
T Consensus 187 ~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~t~sK~l~--~G~~ig~~~~~~-~~ 261 (389)
T PRK01278 187 EGGIRPAPDEFLKGLRQLCDENGLLLIFDEVQCGMGRTGKLFAHEWAGVTPDI--MAVAKGIG--GGFPLGACLATE-EA 261 (389)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCcceeecccCCCCCE--EEEehhcc--CCcceEEEEEcH-HH
Confidence 988543 489999999999999999999872 11111 11223465 47899995 368999999874 45
Q ss_pred HHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC
Q 016612 221 AKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 298 (386)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 298 (386)
.+.+.........+.++..++++...++.+.. ..+...+..+.+.+.+++.. ...+.+ ....++.
T Consensus 262 ~~~~~~~~~~~t~~~~~~~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~l~~l~-------~~~~~~------~~~v~g~ 328 (389)
T PRK01278 262 AKGMTPGTHGSTYGGNPLAMAVGNAVLDVILAPGFLDNVQRMGLYLKQKLEGLV-------DRFPDV------IEEVRGK 328 (389)
T ss_pred HhccCCCCCCCCCCccHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHH-------hhCCCc------eeeEecc
Confidence 55443333333334566666666555543311 12233333344444443211 001100 0112445
Q ss_pred CceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHH
Q 016612 299 GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLI 374 (386)
Q Consensus 299 ~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i 374 (386)
|.++++.+.. ....+.+.+...|+.+.++. .+++|++++ .+++++.+
T Consensus 329 G~~~~i~~~~--~~~~~~~~l~~~GV~~~p~~---------------------------~~~lR~~p~~~~~~~~i~~~l 379 (389)
T PRK01278 329 GLLLGLKCVV--PNRDLVQALRDEGLLTVGAG---------------------------DNVVRLLPPLIITEEEIDEAL 379 (389)
T ss_pred cEEEEEEEec--CHHHHHHHHHHCCeEEeecC---------------------------CCEEEEeCCcccCHHHHHHHH
Confidence 6777777643 24566666666677654332 345999864 47788888
Q ss_pred HHHHHHHhc
Q 016612 375 SDLDKALRT 383 (386)
Q Consensus 375 ~~l~~~l~~ 383 (386)
+.|.+++++
T Consensus 380 ~~l~~~l~~ 388 (389)
T PRK01278 380 ERLERAAES 388 (389)
T ss_pred HHHHHHHHh
Confidence 888888765
No 226
>PRK03244 argD acetylornithine aminotransferase; Provisional
Probab=99.87 E-value=1.1e-20 Score=178.47 Aligned_cols=283 Identities=20% Similarity=0.210 Sum_probs=180.6
Q ss_pred CCchHHHHHHHHHhhcCCC---ceEEeCcHHHHHHHHHH-hcCCC-CEEEecCCCCCcHHHHHhhhc---------ccCC
Q 016612 53 GNPTRDALESLLAKLDKAD---RALCFTSGMAALAAVTH-LLGTG-EEIVAGDDLYGGTDRLLSRVT---------PKTG 118 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~---~~i~~~~gt~al~~~~~-~~~~g-~~Vlv~~~~~~~~~~~~~~~~---------~~~g 118 (386)
..+...++++.++++++.+ +.++++||++|+.+++. ...+| +.|+..++.|+++........ ...+
T Consensus 83 ~~~~~~~la~~l~~~~~~~~~~~v~~~~sgsea~~~al~~~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~ 162 (398)
T PRK03244 83 ATEPQIALAERLVELLGAPEGGRVFFCNSGAEANEAAFKLARLTGRTKIVAAEGGFHGRTMGALALTGQPAKRAPFEPLP 162 (398)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEEeCchHHHHHHHHHHHHHHCCCeEEEECCCcCCccHHHHhccCCcccccCCCCCC
Confidence 3345678999999988753 67777888999864433 33344 467777778876632211111 1112
Q ss_pred cEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCC
Q 016612 119 VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLE 188 (386)
Q Consensus 119 ~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~ 188 (386)
.++..++..|++++++.+.+++++|++++++||+|.+.| +++|.++|++||+++|+||+++. +... ....
T Consensus 163 ~~~~~~~~~d~~~l~~~~~~~~~aviiep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~ 242 (398)
T PRK03244 163 GGVEHVPYGDVDALAAAVDDDTAAVFLEPIQGEAGVVPPPAGYLAAAREITDRHGALLVLDEVQTGIGRTGAWFAHQHDG 242 (398)
T ss_pred CCceEeCCCCHHHHHHhhcCCeEEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCcccchHHhhhhhC
Confidence 345666767999999998888999999999999999987 89999999999999999999852 1111 1122
Q ss_pred CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHH
Q 016612 189 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAE 266 (386)
Q Consensus 189 ~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~ 266 (386)
...|++ ++||+++ +|+++|+++++++ +.+.+.........+.++..+.++...++.+.. ..++..+..+.+.+
T Consensus 243 ~~pDi~--t~sK~l~--~G~~ig~~~~~~~-~~~~~~~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~ 317 (398)
T PRK03244 243 VTPDVV--TLAKGLG--GGLPIGACLAFGP-AADLLTPGLHGSTFGGNPVACAAALAVLDTIASEGLLENAERLGEQLRA 317 (398)
T ss_pred CCCCEE--EEchhhh--CCcccEEEEEcHH-HHhhccCCCCcCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 346765 6689996 3688999998754 555443322222334556666665555442221 12222233333333
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCC
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 346 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~ 346 (386)
.+++.. .+.+ ...++.|.++++.++.. ....+.+++..+|+.+++.
T Consensus 318 ~L~~~~------~~~~----------~~v~g~g~~~~i~~~~~-~~~~~~~~l~~~Gv~~~~~----------------- 363 (398)
T PRK03244 318 GIEALG------HPLV----------DHVRGRGLLLGIVLTAP-VAKAVEAAAREAGFLVNAV----------------- 363 (398)
T ss_pred HHHhcC------CCce----------eeEeeccEEEEEEEecc-HHHHHHHHHHHCCeEEeec-----------------
Confidence 333211 0100 11245688899888543 4667888888888865431
Q ss_pred CHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 347 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
..+.+|++++. ++++++++.|+++++++
T Consensus 364 ----------~~~~iR~~p~~~~t~~~i~~~~~~l~~~l~~~ 395 (398)
T PRK03244 364 ----------APDVIRLAPPLIITDAQVDAFVAALPAILDAA 395 (398)
T ss_pred ----------CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhc
Confidence 12459999654 88888888888888754
No 227
>PRK15407 lipopolysaccharide biosynthesis protein RfbH; Provisional
Probab=99.87 E-value=1.5e-19 Score=170.92 Aligned_cols=253 Identities=19% Similarity=0.137 Sum_probs=178.9
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh---------cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~---------~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
+...++++.+++++|.+.+++++||++++. ++.++ ++|||+|+++.++|.++... +...|.+++.+
T Consensus 63 ~~~~~fe~~lA~~~g~~~~v~~~sGt~al~~aL~al~~~~~~~~~~~pGd~VIv~~~t~~a~~~~----v~~~G~~pv~v 138 (438)
T PRK15407 63 RFNDAFEKKLAEFLGVRYALLVNSGSSANLLAFSALTSPKLGDRALKPGDEVITVAAGFPTTVNP----IIQNGLVPVFV 138 (438)
T ss_pred hhHHHHHHHHHHHhCCCeEEEECCHHHHHHHHHHHHhhccccccCCCCCCEEEECCCCcHHHHHH----HHHcCCEEEEE
Confidence 567899999999999999999999998876 44333 58999999999999888643 34678888887
Q ss_pred CCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCC--ccEEEe
Q 016612 125 NTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMH 196 (386)
Q Consensus 125 ~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~--~di~~~ 196 (386)
+.+ |++++++.+++++++|+++++ .|...++++|.++|+++|++||+|++++.|...+....| .|+.++
T Consensus 139 dvd~~~~~id~~~le~~i~~~tkaVi~~~~---~G~p~dl~~I~~la~~~gi~vIeDaa~a~G~~~~g~~~G~~gd~~~f 215 (438)
T PRK15407 139 DVELPTYNIDASLLEAAVSPKTKAIMIAHT---LGNPFDLAAVKAFCDKHNLWLIEDNCDALGSTYDGRMTGTFGDIATL 215 (438)
T ss_pred ecCCCcCCcCHHHHHHHcCcCCeEEEEeCC---CCChhhHHHHHHHHHHCCCEEEEECccchhhhcCCeeeeccCceEEE
Confidence 653 789999999999999998874 677789999999999999999999999988754332222 388888
Q ss_pred ccc--cccccCCCceEEEEEEcChhHHHHHHHhhhhc---------------------------------------CCCC
Q 016612 197 SAT--KFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---------------------------------------GSGL 235 (386)
Q Consensus 197 S~s--K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~---------------------------------------~~~~ 235 (386)
||+ |.+... .||+++++++++.+.++.+...+ ...+
T Consensus 216 Sf~~~k~~~~g---eGG~l~t~d~~l~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~n~rm 292 (438)
T PRK15407 216 SFYPAHHITMG---EGGAVFTNDPLLKKIIESFRDWGRDCWCAPGCDNTCGKRFGWQLGELPFGYDHKYTYSHLGYNLKI 292 (438)
T ss_pred eCCCCCCcccc---CceEEEECCHHHHHHHHHHHHhCcccccccccccccccccccccccccccccccccccccccccCc
Confidence 876 445432 26999999988876655443211 1235
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHH
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSK 313 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~ 313 (386)
+..++++.+..++.+..+.++..++++.+.+.|...+.. ...+..+ ++. ......+.+.+++ ....+
T Consensus 293 sel~AAig~~qL~~l~~~~~~R~~~a~~y~~~L~~~~~~--~~~~~~~--~~~-------~~~~~~~~i~~~~~~~~~Rd 361 (438)
T PRK15407 293 TDMQAAIGLAQLEKLPGFIEARKANFAYLKEGLASLEDF--LILPEAT--PNS-------DPSWFGFPITVKEDAGFTRV 361 (438)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCc--cccCcCC--CCC-------eeEEEEEEEEECCcCCCCHH
Confidence 556777777778888888888888888888887654310 1111110 000 0011233444433 22367
Q ss_pred HHHhhcCcceeccCC
Q 016612 314 HVVETTKYFSITVSF 328 (386)
Q Consensus 314 ~l~~~l~~~gi~~~~ 328 (386)
++.+.|...||..+.
T Consensus 362 ~l~~~L~~~GI~~~~ 376 (438)
T PRK15407 362 ELVKYLEENKIGTRL 376 (438)
T ss_pred HHHHHHHHCCCCccc
Confidence 888888888887653
No 228
>PRK02627 acetylornithine aminotransferase; Provisional
Probab=99.86 E-value=1.3e-20 Score=178.02 Aligned_cols=284 Identities=17% Similarity=0.232 Sum_probs=179.2
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-hcCCC-------CEEEecCCCCCcHHHHHhhhcccC-------
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTG-------EEIVAGDDLYGGTDRLLSRVTPKT------- 117 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~~~~g-------~~Vlv~~~~~~~~~~~~~~~~~~~------- 117 (386)
..+.+.++++.++++.+.++.++++||++|+.+++. +...+ ++|++.++.|+++...........
T Consensus 79 ~~~~~~~la~~l~~~~~~~~v~~~~gg~eA~~~al~~a~~~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~ 158 (396)
T PRK02627 79 YIEPQEELAEKLVELSGMDKVFFCNSGAEANEAAIKLARKYGHKKGIEKPEIITAENSFHGRTLATLSATGQPKYQEGFE 158 (396)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEECCCcHHHHHHHHHHHHHHhcccCCCCCeEEEECCCcCcccHHHHHhcCCccccccCC
Confidence 356899999999999988888999999999874433 32222 679999998876632211111000
Q ss_pred --CcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc-cc---HHHHHHHHHHcCCEEEEeCCCCC-CCcc---C--
Q 016612 118 --GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI-CD---IRKIAEMAHAHGALLLVDNSIMS-PVLS---R-- 185 (386)
Q Consensus 118 --g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~-~~---l~~i~~la~~~~~~li~D~a~~~-~~~~---~-- 185 (386)
...+..++..|++++++.+++++++|++++++||+|.. .+ +++|.++|+++|+++|+||+|+. +... .
T Consensus 159 ~~~~~~~~~~~~d~~~l~~~i~~~~~~vii~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DE~~~g~g~~g~~~~~~ 238 (396)
T PRK02627 159 PLVEGFIYVPFNDIEALKAAITDKTAAVMLEPIQGEGGVNPADKEYLQALRELCDENGILLILDEVQTGMGRTGKLFAYQ 238 (396)
T ss_pred CCCCCceEeCCCCHHHHHHhcCCCeEEEEEecccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhcCCCccCceeeeh
Confidence 11234455569999999998899999999999999954 33 89999999999999999999872 2111 1
Q ss_pred CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHH
Q 016612 186 PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQK 263 (386)
Q Consensus 186 ~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 263 (386)
......|++ ++||.++ +|+|+|+++++ +.+.+.+.........+.++..++++...++.+.. ..+...+..+.
T Consensus 239 ~~~~~pdi~--t~sK~~~--~G~rig~~~~~-~~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~~~~~~~~~~~~~~~~~ 313 (396)
T PRK02627 239 HYGIEPDIM--TLAKGLG--GGVPIGAVLAK-EKVADVFTPGDHGSTFGGNPLACAAALAVIEIIEEEGLLENAAEVGEY 313 (396)
T ss_pred hcCCCCCEE--EEcchhh--CCcccEEEEEc-HHHHhccCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHH
Confidence 112234654 6899995 46899999987 44555443322333345566666665555543221 12233333344
Q ss_pred HHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccC
Q 016612 264 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 343 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~ 343 (386)
+.+.+.+.. ..++.. ...++.|.++++.++. ...++.+.+...|+.+.++.
T Consensus 314 ~~~~l~~~~----------~~~~~~----~~~~~~g~~~~i~~~~--~~~~~~~~l~~~Gv~v~~~~------------- 364 (396)
T PRK02627 314 LRAKLRELL----------EKYPGI----KEVRGLGLMIGIELDR--PAAEIVKKALEKGLLINVTG------------- 364 (396)
T ss_pred HHHHHHHHH----------HhCCCe----eeeccCcEEEEEEecC--cHHHHHHHHHHCCeEEeecC-------------
Confidence 444443321 001100 1123457788888732 25567777766687655432
Q ss_pred CCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 344 ASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 344 ~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+++|++++ .+++++.++.|++++++.
T Consensus 365 --------------~~~lRi~~~~~~~~~~i~~~~~~l~~~l~~~ 395 (396)
T PRK02627 365 --------------DNVLRLLPPLIISKEEIDEAVDRLEEVLKEL 395 (396)
T ss_pred --------------CCEEEEECCcccCHHHHHHHHHHHHHHHHhh
Confidence 245999864 478888888888887653
No 229
>PRK07505 hypothetical protein; Provisional
Probab=99.86 E-value=1.4e-19 Score=170.88 Aligned_cols=321 Identities=17% Similarity=0.162 Sum_probs=188.5
Q ss_pred ceeeccCCCCCCCC-CcccceeeeeeeecCCCCCCC--CccccC--CCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHH
Q 016612 11 TLLMNFSNEFDPYG-ALSTPLYQTATFKQPSATENG--PYDYTR--SGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (386)
Q Consensus 11 ~~~~~~~~~~~~~g-~~~~~~~~~~~~~~~~~~~~~--~~~y~~--~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~ 85 (386)
...++++ +++++| ..+|.+.++... ++...+ ....+. ...+...++++.++++++. +.+++++|++|...
T Consensus 46 ~~~ld~~-s~~~lgl~~~p~v~~A~~~---~l~~~g~~~~~~~~~~~~~~~~~~l~~~la~~~~~-~~~~~~sG~~a~~~ 120 (402)
T PRK07505 46 HTFVNFV-SCSYLGLDTHPAIIEGAVD---ALKRTGSLHLSSSRTRVRSQILKDLEEALSELFGA-SVLTFTSCSAAHLG 120 (402)
T ss_pred ceEEEee-cCCccCCCCCHHHHHHHHH---HHHHhCCCCCCccchhhhhHHHHHHHHHHHHHhCC-CEEEECChHHHHHH
Confidence 3467887 578888 556655553221 111111 111111 1345789999999999988 78888899877653
Q ss_pred HHHh-----cCCCC-EEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHH
Q 016612 86 VTHL-----LGTGE-EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 86 ~~~~-----~~~g~-~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~ 159 (386)
++.+ ..+|+ .|++.+..|++.........+ .+.+++.++..|+++++++++++++++++++|+||+|.+.+++
T Consensus 121 ai~~~~~~~~~~~~~~vi~~~~~~H~s~~~~~~~~~-~~~~v~~~~~~d~~~l~~~~~~~~~~~vl~~p~~~~G~~~~~~ 199 (402)
T PRK07505 121 ILPLLASGHLTGGVPPHMVFDKNAHASLNILKGICA-DETEVETIDHNDLDALEDICKTNKTVAYVADGVYSMGGIAPVK 199 (402)
T ss_pred HHHHHHhcccCCCCCCEEEEchhhhHhHHhhhhhhh-cCCeEEEeCCCCHHHHHHHHhcCCCEEEEEecccccCCcCCHH
Confidence 3322 22232 355555444433211122232 3568888898999999999887788999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCc---c-----CCC---CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPVL---S-----RPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~~---~-----~~~---~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~ 228 (386)
+|.++|+++|+++|+||+|+.+.+ . ... ..+.++++.|++|.++++ +|+++..++++.+.+....
T Consensus 200 ~i~~l~~~~~~~li~DEa~~~~~~g~~g~~~~~~~~~~~~~d~~i~~~s~sK~~~~~----Gg~~~~~~~~~~~~~~~~~ 275 (402)
T PRK07505 200 ELLRLQEKYGLFLYIDDAHGLSIYGKNGEGYVRSELDYRLNERTIIAASLGKAFGAS----GGVIMLGDAEQIELILRYA 275 (402)
T ss_pred HHHHHHHHcCCEEEEECcccccCcCCCCCchHHHHcCCCCCCCeEEEEechhhhhcc----CeEEEeCCHHHHHHHHHhC
Confidence 999999999999999999853211 1 111 123468888999999643 3777665566666554433
Q ss_pred hhc--CCCCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC-c
Q 016612 229 NAE--GSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-S 300 (386)
Q Consensus 229 ~~~--~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~ 300 (386)
... +...++....++...++ .+..+.+...++.+.+...+.. ...+.+ .
T Consensus 276 ~~~t~~~~~~~~a~aa~~a~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~-----------------------~~~g~~~~ 332 (402)
T PRK07505 276 GPLAFSQSLNVAALGAILASAEIHLSEELDQLQQKLQNNIALFDSLIPT-----------------------EQSGSFLP 332 (402)
T ss_pred CCceeCCCCCHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHh-----------------------cCCCCCCC
Confidence 221 12333344444333322 1111112222222211111100 001122 2
Q ss_pred eEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHH
Q 016612 301 VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISD 376 (386)
Q Consensus 301 ~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~ 376 (386)
+..+.+++.....++.+.+...|+.+++... |.. +....+||++++ .++++++++.
T Consensus 333 i~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~~------p~~--------------~~~~~~lRi~~~~~~t~eei~~~~~~ 392 (402)
T PRK07505 333 IRLIYIGDEDTAIKAAKQLLDRGFYTSPVFF------PVV--------------AKGRAGLRIMFRASHTNDEIKRLCSL 392 (402)
T ss_pred EEEEEeCCHHHHHHHHHHHHHCCCeEeeecC------CCC--------------CCCCceEEEecCccCCHHHHHHHHHH
Confidence 2344444443467788888888887665321 100 012357999996 3788888888
Q ss_pred HHHHHhcC
Q 016612 377 LDKALRTG 384 (386)
Q Consensus 377 l~~~l~~~ 384 (386)
|++++++.
T Consensus 393 l~~~l~~~ 400 (402)
T PRK07505 393 LKEILDEG 400 (402)
T ss_pred HHHHHHhh
Confidence 88887764
No 230
>cd00617 Tnase_like Tryptophanase family (Tnase). This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to tryptophanase (Tnase) and tyrosine phenol-lyase (TPL). Tnase and TPL are active as tetramers and catalyze beta-elimination reactions. Tnase catalyzes degradation of L-tryptophan to yield indole, pyruvate and ammonia and TPL catalyzes degradation of L-tyrosine to yield phenol, pyruvate and ammonia.
Probab=99.86 E-value=1.4e-19 Score=169.50 Aligned_cols=295 Identities=16% Similarity=0.133 Sum_probs=187.3
Q ss_pred ccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 47 YDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 47 ~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
..|+.. +...++++.+++++|.+.++++++|++|+. ++.++++|||.| +++|.|..+. ..+...|.+.+.++
T Consensus 47 ~~Y~~~--~g~~~Leeaia~~~g~~~vv~t~~Gt~Al~la~~al~~pGD~V-~~~~~f~~~~----~~i~~~Ga~pv~v~ 119 (431)
T cd00617 47 EAYAGS--KSFYDLEDAVQDLFGFKHIIPTHQGRGAENILFSILLKPGRTV-PSNMHFDTTR----GHIEANGAVPVDLV 119 (431)
T ss_pred CccCCC--CCHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHHhCCCCCEE-ccCCcccchH----HHHHhCCCEeEEEe
Confidence 346544 346688899999999999999999999987 556689999987 6888888875 34456777777665
Q ss_pred C---------------CCHHHHHhhhCCC----ceEEEEeCCCCCC-ccccc---HHHHHHHHHHcCCEEEEeCCCCCC-
Q 016612 126 T---------------CDLDEVASAIGPW----TKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMSP- 181 (386)
Q Consensus 126 ~---------------~d~~~l~~~~~~~----~~~v~~~~~~npt-G~~~~---l~~i~~la~~~~~~li~D~a~~~~- 181 (386)
. .|+++|+++++++ +++|+++.|+||+ |...+ +++|.++|++||++||+|+++...
T Consensus 120 i~~~~~~~~~~pf~gniD~e~Le~~I~~~~~~~~~~I~v~~p~N~~gG~~~s~~~l~~i~eia~~~gi~li~DaAr~~~n 199 (431)
T cd00617 120 IDEAHDAQELIPFKGNIDVAKLEKLIDEVGAENIPYIVLTITNNTAGGQPVSMANLREVRELAHKYGIPVVLDAARFAEN 199 (431)
T ss_pred cccccccccccCCCCCcCHHHHHHHhCcccCCCccEEEEECCcCCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhHhh
Confidence 4 3789999999865 8899999999998 77775 678899999999999999996532
Q ss_pred ----------CccCCC-------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh-----cCCCCChhh
Q 016612 182 ----------VLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-----EGSGLAPFD 239 (386)
Q Consensus 182 ----------~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 239 (386)
....+. ....|.+.+|++|...++. +|+++++++++.+.++..... ...+++..+
T Consensus 200 a~~i~~r~~g~~~~si~ei~~e~~s~sd~~~mS~~K~~~~~~---GG~i~~~d~~l~~~~~~~~~~~~~~~~~gG~~~r~ 276 (431)
T cd00617 200 AYFIKEREEGYRDKSIAEIAREMFSYADGCTMSAKKDGLVNI---GGFLALRDDELYEEARQRVVLYEGFVTYGGMAGRD 276 (431)
T ss_pred hhhhhcccccccCCCHHHHHHHhhccCCEEEEEeecCCCCcc---ceEEEeCcHHHHHHHHHhccccCCccccccccHHH
Confidence 111111 1257889999999876653 689999877677666532211 112333333
Q ss_pred HHHHHhcCCcH--HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe-----------
Q 016612 240 CWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT----------- 306 (386)
Q Consensus 240 ~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~----------- 306 (386)
..++..+++.. ....++..++.+.+.+.|++.. ++.. .|. .+..+++..
T Consensus 277 ~~A~A~gL~e~~~~~~l~~~~~~r~~l~~~L~~~G---------~~v~--------~P~-Ggh~v~~d~~~~~~~~~~~~ 338 (431)
T cd00617 277 MEALAQGLREAVEEDYLRHRVEQVRYLGDRLDEAG---------VPIV--------EPA-GGHAVFIDAREFLPHIPQEQ 338 (431)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHCC---------CCcc--------CCC-cceEEEEEhHHhcCCCCccc
Confidence 33333233221 2334444555566667776542 1111 111 123333332
Q ss_pred -CCHHhHHHHHhhcCcceeccCCCCccccccccccc-cCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHH
Q 016612 307 -GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM-SHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDK 379 (386)
Q Consensus 307 -~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~-~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~ 379 (386)
+...++.+++.+.++.++.. |.. ..+... +..-. ...-..+|+.+. .++++.+.+.+.+
T Consensus 339 ~~~~~la~~L~~e~gV~~~~~--g~~----~~~~~~~~~~~~--------~~~~~~~rl~~prr~~t~~~~~~~~~~~~~ 404 (431)
T cd00617 339 FPAQALAAELYLEAGVRAVEL--GIF----SAGRDPNTGENK--------YPELELVRLAIPRRVYTQDHMDYVAAAVIA 404 (431)
T ss_pred CcHHHHHHHHHHHcCeeEEee--cce----ecccCCCCCccc--------CCccceeEEeccccccCHHHHHHHHHHHHH
Confidence 24455667777777665432 111 011100 00000 001367999984 4888888888888
Q ss_pred HHhc
Q 016612 380 ALRT 383 (386)
Q Consensus 380 ~l~~ 383 (386)
.+++
T Consensus 405 ~~~~ 408 (431)
T cd00617 405 LYER 408 (431)
T ss_pred HHhh
Confidence 8765
No 231
>cd00610 OAT_like Acetyl ornithine aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD correspond to ornithine aminotransferase, acetylornithine aminotransferase, alanine-glyoxylate aminotransferase, dialkylglycine decarboxylase, 4-aminobutyrate aminotransferase, beta-alanine-pyruvate aminotransferase, adenosylmethionine-8-amino-7-oxononanoate aminotransferase, and glutamate-1-semialdehyde 2,1-aminomutase. All the enzymes belonging to this family act on basic amino acids and their derivatives are involved in transamination or decarboxylation.
Probab=99.86 E-value=2.4e-20 Score=177.34 Aligned_cols=321 Identities=16% Similarity=0.159 Sum_probs=194.2
Q ss_pred ceeeccCCCCCC--CCCcccceeeeeeeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhcC--CCceEEeCcHHHHHH
Q 016612 11 TLLMNFSNEFDP--YGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDK--ADRALCFTSGMAALA 84 (386)
Q Consensus 11 ~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~ 84 (386)
..++++..++++ +|..+|.+.++...... ....|... + .+...++++.++++++ .+..++++||++|+.
T Consensus 36 ~~~id~~~~~~~~~lG~~~p~v~~a~~~~~~-----~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~v~~~~sgsea~~ 110 (413)
T cd00610 36 NRYLDFLSGIGVLNLGHNHPEVVEALKEQLA-----KLTHFSLGFFYNEPAVELAELLLALTPEGLDKVFFVNSGTEAVE 110 (413)
T ss_pred CEEEEcCccHHhhccCCCCHHHHHHHHHHHH-----hCcCccCcccCCHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHH
Confidence 356677644443 77656655543222111 11223322 2 4578999999999998 567888899999987
Q ss_pred HHHH-h--cCCCCEEEecCCCCCcHHHHHhhhccc---------CCcEEEEeCCC-----------CHHHHHhhhCC---
Q 016612 85 AVTH-L--LGTGEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTC-----------DLDEVASAIGP--- 138 (386)
Q Consensus 85 ~~~~-~--~~~g~~Vlv~~~~~~~~~~~~~~~~~~---------~g~~~~~v~~~-----------d~~~l~~~~~~--- 138 (386)
+++. + ..+++.|++.++.|++........... ...++..++.+ |++++++.+++
T Consensus 111 ~al~~~~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~ 190 (413)
T cd00610 111 AALKLARAYTGRKKIISFEGAYHGRTLGALSLTGSKKYRGGFGPLLPGVLHVPYPYRYRPPAELADDLEALEEALEEHPE 190 (413)
T ss_pred HHHHHHHHHcCCCeEEEECCCcCCccHHHHHhcCCccccccCCCCCCCcEEeCCCccccchhhHHHHHHHHHHHHhcCCC
Confidence 5443 3 367899999999988864332222111 12345666665 78899988864
Q ss_pred CceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCC-Ccc-----CCCCCCccEEEeccccccccCCCc
Q 016612 139 WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS-----RPLELGADIVMHSATKFIAGHSDV 208 (386)
Q Consensus 139 ~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~-~~~-----~~~~~~~di~~~S~sK~~~g~~g~ 208 (386)
+++++++++.++++|.+.+ +++|.++|+++|+++|+||+++.. ... +......|++ |+||++++ |+
T Consensus 191 ~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~g~g~~g~~~~~~~~~~~~d~~--t~sK~l~~--g~ 266 (413)
T cd00610 191 EVAAVIVEPIQGEGGVIVPPPGYLKALRELCRKHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIV--TLGKGLGG--GL 266 (413)
T ss_pred CEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCcchhhHhhcCCCCCeE--EEcccccC--cc
Confidence 6788888888888899886 999999999999999999998632 111 1112234654 67899965 57
Q ss_pred eEEEEEEcChhHHHHH--HHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCC
Q 016612 209 MAGVLAVKGERLAKEL--YFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPE 284 (386)
Q Consensus 209 ~~G~i~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~ 284 (386)
++|+++++ +++.+.+ ...........++..+.++...++.+. ...++..+..+.+.+.+++... .. .
T Consensus 267 ~~g~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~~a~~a~l~~l~~~~~~~~~~~~~~~l~~~l~~~~~-------~~-~ 337 (413)
T cd00610 267 PLGAVLGR-EEIMDAFPAGPGLHGGTFGGNPLACAAALAVLEVLEEEGLLENAAELGEYLRERLRELAE-------KH-P 337 (413)
T ss_pred ccEEEEEc-HHHHHhhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh-------hC-C
Confidence 89999886 5565543 122222223445555555444443322 1223334444444444443210 00 0
Q ss_pred CCchhhhhhccCCCCceEEEEeCCH--------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 285 HPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 285 ~~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
. . ...++.++++++.+.+. .....+.+.+...|+.+.++.
T Consensus 338 ~-----~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gv~v~~~~-------------------------- 385 (413)
T cd00610 338 L-----V-GDVRGRGLMIGIELVKDRATKPPDKELAAKIIKAALERGLLLRPSG-------------------------- 385 (413)
T ss_pred c-----E-EEeecCceEEEEEEecCCCcCCcchHHHHHHHHHHHHCCeEEeecC--------------------------
Confidence 0 0 01134678899888543 456778888888888665432
Q ss_pred CCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 357 TEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 357 ~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
.+.+|++++....++.++.+.+.|+
T Consensus 386 -~~~lR~~~~~~~t~~~i~~~~~~l~ 410 (413)
T cd00610 386 -GNVIRLLPPLIITEEEIDEGLDALD 410 (413)
T ss_pred -CCEEEEECCCcCCHHHHHHHHHHHH
Confidence 2349999876544444444444443
No 232
>PRK04073 rocD ornithine--oxo-acid transaminase; Provisional
Probab=99.85 E-value=7.6e-20 Score=172.31 Aligned_cols=306 Identities=15% Similarity=0.161 Sum_probs=185.2
Q ss_pred CCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhc---------
Q 016612 21 DPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL--------- 90 (386)
Q Consensus 21 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~--------- 90 (386)
..+|..+|.+.++......+ ... +++. ..+...++++.++++.+.+..++++||++|+.+++.+.
T Consensus 52 ~~lGh~~p~v~~ai~~~~~~----~~~-~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~SGseA~e~Alk~a~~~~~~~~g 126 (396)
T PRK04073 52 VNQGHRHPKIIQALKDQADK----VTL-TSRAFHSDQLGPWYEKVAKLTGKDMVLPMNTGAEAVETAIKAARRWAYDVKG 126 (396)
T ss_pred ccCCCCCHHHHHHHHHHHhh----ccc-cccccCCHHHHHHHHHHHhcCCCCeEEEcCChHHHHHHHHHHHHHHhhhccC
Confidence 34677777766543222111 111 1222 34567788999999888788999999999986443321
Q ss_pred -CCC-CEEEecCCCCCcH-HHHHhhhccc------CC---cEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc-
Q 016612 91 -GTG-EEIVAGDDLYGGT-DRLLSRVTPK------TG---VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD- 157 (386)
Q Consensus 91 -~~g-~~Vlv~~~~~~~~-~~~~~~~~~~------~g---~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~- 157 (386)
++| ++|++.+..|++. ...+ .+... ++ ..+..++..|++++++.+++++++|++++++||+|.+.|
T Consensus 127 ~~~~r~~ii~~~~~~HG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~viiep~~~~~G~~~~~ 205 (396)
T PRK04073 127 VEPNKAEIIACEGNFHGRTMAAV-SLSSEEEYKRGFGPMLPGIKKIPYGDLEALKAAITPNTAAFLVEPIQGEAGINIPP 205 (396)
T ss_pred CCCCCCEEEEECCCcCCCCHHHH-hhcCCcccccCCCCCCCCceEeCCCCHHHHHHhcccCeEEEEEcCccCCCCCccCC
Confidence 133 6777776666554 2222 11111 10 123556667999999999889999999999999999976
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh
Q 016612 158 ---IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (386)
Q Consensus 158 ---l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~ 228 (386)
+++|.++|+++|+++|+||+|.. +... +......|+++ +||.+++ +|+++|+++++ +++.+.+....
T Consensus 206 ~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~pdi~~--~sK~lg~-gg~~ig~~~~~-~~i~~~~~~~~ 281 (396)
T PRK04073 206 EGFLKAARELCKEENVLFIADEIQTGLGRTGKLFACDWDNVTPDMYI--LGKALGG-GVFPISCVAAN-RDILGVFTPGS 281 (396)
T ss_pred HHHHHHHHHHHHHcCCEEEEecchhCCCcCcHHHHhhhcCCCCCEEE--ecccccC-CCCcceEEEEc-HHHHhhhcCCC
Confidence 89999999999999999999872 2111 11223467665 6899954 56789999987 45655443322
Q ss_pred hhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe
Q 016612 229 NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 306 (386)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 306 (386)
.....+.++..++++...++.+.. ..+...+..+.+.+.+++.. .+.+ ...++.|.++.+.+
T Consensus 282 ~~~t~~~~~~~~aaa~aaL~~~~~~~l~~~~~~~~~~l~~~L~~l~------~~~i----------~~~~~~g~~~~~~~ 345 (396)
T PRK04073 282 HGSTFGGNPLACAVSIAALEVLEEEKLPERSLELGEYFKEQLKEID------NPMI----------KEVRGRGLFIGVEL 345 (396)
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHhhc------CCcc----------cceecceEEEEEEe
Confidence 222334566666666555543211 11222233333444443321 0111 11245678888877
Q ss_pred CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHH
Q 016612 307 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKAL 381 (386)
Q Consensus 307 ~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l 381 (386)
.. ....+.+.+...|+.+.+. .+++||+++. .++++++++.|++++
T Consensus 346 ~~--~~~~~~~~l~~~Gv~~~~~---------------------------~~~~iRi~p~l~~t~e~i~~~~~~l~~~l 395 (396)
T PRK04073 346 NE--PARPYCEALKEEGLLCKET---------------------------HETVIRFAPPLVITKEELDWAFEKIKAVL 395 (396)
T ss_pred cc--hHHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCcccCHHHHHHHHHHHHHHh
Confidence 53 2456666666677754321 2356999964 466777777776654
No 233
>PRK00451 glycine dehydrogenase subunit 1; Validated
Probab=99.85 E-value=8.5e-20 Score=174.91 Aligned_cols=156 Identities=26% Similarity=0.344 Sum_probs=124.0
Q ss_pred HHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----CH
Q 016612 58 DALESLLAKLDKAD--RALCFTSGMAALAAV-THL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DL 129 (386)
Q Consensus 58 ~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~ 129 (386)
.++++++++++|.+ +.+++++|++++.++ +++ .++||+|+++++.|+++...+...++..|.+++.++.+ |+
T Consensus 115 ~e~~~~la~l~g~~~~~v~~~~g~t~~~~~~~~a~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~G~~~~~v~~~~~~~d~ 194 (447)
T PRK00451 115 FEYQTMICELTGMDVANASMYDGATALAEAALMAVRITKRKKVLVSGAVHPEYREVLKTYLKGQGIEVVEVPYEDGVTDL 194 (447)
T ss_pred HHHHHHHHHHhCCCcceEEecCcHHHHHHHHHHHHHhcCCCEEEEeCccCHHHHHHHHHHHHhCCcEEEEecCCCCCCCH
Confidence 33446779999987 345666667887644 454 47999999999999999877766666789999998875 88
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE--eCCCCCCCccCCCCCCccEEEeccccc-----c
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV--DNSIMSPVLSRPLELGADIVMHSATKF-----I 202 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~--D~a~~~~~~~~~~~~~~di~~~S~sK~-----~ 202 (386)
+++++.+++++++|++++| |+||.+.|+++|.++|+++|+++++ |.. +.+.+..+.+.++|++++|.+|+ +
T Consensus 195 ~~l~~~i~~~t~~v~l~~p-n~tG~v~~l~~I~~~a~~~~~~~iv~~d~~-~~g~~~~~~~~~~D~~~~s~~k~~~~~~~ 272 (447)
T PRK00451 195 EALEAAVDDDTAAVVVQYP-NFFGVIEDLEEIAEIAHAGGALFIVGVDPV-SLGLLKPPGEYGADIVVGEGQPLGIPLSF 272 (447)
T ss_pred HHHHHhcCCCeEEEEEECC-CCCCeeCCHHHHHHHHHHCCCEEEEEcChH-HhccCCCcccCCCCEEEECCCcCCCCCCC
Confidence 9999999999999999999 8899999999999999999999998 544 44555455677999999987775 4
Q ss_pred ccCCCceEEEEEEcCh
Q 016612 203 AGHSDVMAGVLAVKGE 218 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~ 218 (386)
+|| ++|+++++++
T Consensus 273 ~Gp---g~G~l~~~~~ 285 (447)
T PRK00451 273 GGP---YLGFFATRKK 285 (447)
T ss_pred CCC---CchHHHhhHH
Confidence 444 4899988754
No 234
>PRK02936 argD acetylornithine aminotransferase; Provisional
Probab=99.84 E-value=1.7e-19 Score=169.11 Aligned_cols=315 Identities=16% Similarity=0.146 Sum_probs=191.6
Q ss_pred eeeccCCCCC---CCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHH
Q 016612 12 LLMNFSNEFD---PYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (386)
Q Consensus 12 ~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~ 87 (386)
+.+++. ++. ++|..+|.+.++......+ ... .+.. ..+++.++.+.+.+..+.+..++++||++|+.+++
T Consensus 30 ~~lD~~-s~~~~~~lG~~~p~v~~a~~~~~~~----~~~-~~~~~~~~~~~~la~~l~~~~~~~~~~~~~sG~~a~~~A~ 103 (377)
T PRK02936 30 TYLDFT-SGIAVCNLGHCHPTVTKAVQEQLDD----IWH-VSNLFTNSLQEEVASLLAENSAGDLVFFCNSGAEANEAAL 103 (377)
T ss_pred EEEECC-cchhhccCCCCCHHHHHHHHHHHHh----ccc-cccccCCHHHHHHHHHHHhcCCCCEEEEeCCcHHHHHHHH
Confidence 567776 444 7998777766542222111 111 1222 34578888888888877778888999999986444
Q ss_pred Hh---cCCCCEEEecCCCCCcHHHHHhhhcccC---------CcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc
Q 016612 88 HL---LGTGEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 88 ~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~~---------g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~ 155 (386)
.+ ...++.|++.++.|++............ ...+..++..|++++++.+++++++|+++++++++|..
T Consensus 104 ~~a~~~~g~~~vi~~~~~~Hg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~~ii~e~i~~~~G~~ 183 (377)
T PRK02936 104 KLARKHTGKSKIVTFEQSFHGRTFGTMSATGQEKIKEGFGPLLPGFTHVPFNDIKALKEVMNEEVAAVMLEVVQGEGGVI 183 (377)
T ss_pred HHHHHhcCCCeEEEECCCcCCCcHHhhhccCCccccccCCCCCCCceEeCCCCHHHHHHhccCCeEEEEEecccCCCCCc
Confidence 43 2334678888887765432211111110 01334566678999999998889999999999988877
Q ss_pred cc----HHHHHHHHHHcCCEEEEeCCCCC-CCccCC-----CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHH
Q 016612 156 CD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (386)
Q Consensus 156 ~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~~-----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~ 225 (386)
.+ +++|.++|++||+++|+||+|.. +..... .....|++ ++||.++ +|+++|+++++ +++.+.+.
T Consensus 184 ~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l~--~G~~ig~v~~~-~~~~~~~~ 258 (377)
T PRK02936 184 PADPAFLQEVQTLCKKFGALLIIDEVQTGIGRTGTLFAYEQFGLDPDIV--TVAKGLG--NGIPVGAMIGK-KELGTAFG 258 (377)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhhCCCCcEE--EEccccc--CCCccEEEEEc-HHHHhhcc
Confidence 43 99999999999999999999852 111111 12234654 6899995 46899999986 55655443
Q ss_pred HhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEE
Q 016612 226 FLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 303 (386)
Q Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 303 (386)
........+.++..++++...++.+. ...++..++.+.+.+.+++.. +++ +.. ...++.|.+++
T Consensus 259 ~~~~~~t~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~l~~~L~~~~-------~~~---~~~----~~v~~~g~~~~ 324 (377)
T PRK02936 259 PGSHGSTFGGNPLAMAAAKEVLQVIKQPSFLEEVQEKGEYFLQKLQEEL-------EHL---ECV----KNIRGKGLMIG 324 (377)
T ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH-------hhC---CcE----EeEeecceEEE
Confidence 32222223456666666666554431 233444455555555555421 011 110 01123567888
Q ss_pred EEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHH
Q 016612 304 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDK 379 (386)
Q Consensus 304 ~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~ 379 (386)
+.+.+. ...+.+.+...|+.+.++ +.+++|+++.. +++++.++.|++
T Consensus 325 i~~~~~--~~~~~~~l~~~gv~v~~~---------------------------g~~~lRi~p~~~~~~~~i~~~i~~l~~ 375 (377)
T PRK02936 325 IECTEE--VAPVIEQLREEGLLVLSA---------------------------GPNVIRLLPPLVVTKEELDQAVYLLKK 375 (377)
T ss_pred EEecch--HHHHHHHHHHCCeEEecC---------------------------CCCEEEEECCcccCHHHHHHHHHHHHH
Confidence 888543 556777777777754332 13569999743 566666666655
Q ss_pred H
Q 016612 380 A 380 (386)
Q Consensus 380 ~ 380 (386)
+
T Consensus 376 ~ 376 (377)
T PRK02936 376 V 376 (377)
T ss_pred h
Confidence 4
No 235
>PRK04366 glycine dehydrogenase subunit 2; Validated
Probab=99.84 E-value=3.2e-19 Score=171.20 Aligned_cols=161 Identities=24% Similarity=0.343 Sum_probs=126.0
Q ss_pred CCc-hHHHHHHHHHhhcCCCceEEe-CcHHHH-HHHH--H--HhcCCCC----EEEecCCCCCcHHHHHhhhcccCCcEE
Q 016612 53 GNP-TRDALESLLAKLDKADRALCF-TSGMAA-LAAV--T--HLLGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (386)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~~~~i~~-~~gt~a-l~~~--~--~~~~~g~----~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 121 (386)
|.. ++.++++++++++|.++..+. ++|+.+ +..+ . .++++|| +|+++++.|+++.. .++..|+++
T Consensus 110 G~lel~~~~~~~la~l~G~~~~~l~~~~GA~a~~~~l~~~r~~~~~~Gd~~~~~Vlv~~~~hp~~~~----~~~~~G~~v 185 (481)
T PRK04366 110 GALELMYELQEWLKEITGMDAVTLQPAAGAHGELTGLLMIRAYHEARGDTKRTEVIVPDSAHGTNPA----SAAMAGFKV 185 (481)
T ss_pred HHHHHHHHHHHHHHHHhCCCceEEEeCcHHHHHHHHHHHHHHHhhccCcCCCCEEEEcCCccHhHHH----HHHHcCCEE
Confidence 554 789999999999999854444 566544 3322 2 2356776 99999999998863 456789999
Q ss_pred EEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCccc-ccHHHHHHHHHHcCCEEEEeCCCCCCCc--cCCCCCCccE
Q 016612 122 KRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADI 193 (386)
Q Consensus 122 ~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~-~~l~~i~~la~~~~~~li~D~a~~~~~~--~~~~~~~~di 193 (386)
+.++.+ |++++++.+++++++|++++|+ ++|.+ .|+++|+++|+++|+++++|+++..+.. .++.+.|+|+
T Consensus 186 v~v~~~~~~~~D~e~L~~~i~~~t~~V~v~~Pn-~tG~~~~dl~eI~~~a~~~gal~iVD~a~~~~~~g~~~~~~~GaD~ 264 (481)
T PRK04366 186 VEIPSNEDGLVDLEALKAAVGEDTAALMLTNPN-TLGLFERNILEIAEIVHEAGGLLYYDGANLNAILGKARPGDMGFDV 264 (481)
T ss_pred EEeecCCCCCcCHHHHHhhcccCCeEEEEeCCC-CccccchHHHHHHHHHHHcCCEEEEEecChhhhcccCCccccCCCE
Confidence 988763 8899999999899999999988 89987 4899999999999999999999874422 2566789999
Q ss_pred EEeccccccccCCC---ceEEEEEEcCh
Q 016612 194 VMHSATKFIAGHSD---VMAGVLAVKGE 218 (386)
Q Consensus 194 ~~~S~sK~~~g~~g---~~~G~i~~~~~ 218 (386)
+++|+||++++|.| .-+|+++++++
T Consensus 265 ~~~~~hK~l~~P~g~Ggp~~G~l~~~~~ 292 (481)
T PRK04366 265 VHLNLHKTFSTPHGGGGPGSGPVGVKEE 292 (481)
T ss_pred EEEechhhcCCCCCCCCCCeeeeeehhh
Confidence 99999999975532 22688888754
No 236
>TIGR03246 arg_catab_astC succinylornithine transaminase family. Members of the seed alignment for this protein family are the enzyme succinylornithine transaminase (EC 2.6.1.81), which catalyzes the third of five steps in arginine succinyltransferase (AST) pathway, an ammonia-releasing pathway of arginine degradation. All seed alignment sequences are found within arginine succinyltransferase operons, and all proteins that score above 820.0 bits should function as succinylornithine transaminase. However, a number of sequences extremely closely related in sequence, found in different genomic contexts, are likely to act in different biological processes and may act on different substrates. This model is desigated subfamily rather than equivalog, pending further consideration, for this reason.
Probab=99.84 E-value=3.9e-19 Score=167.30 Aligned_cols=321 Identities=17% Similarity=0.185 Sum_probs=194.9
Q ss_pred ceeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccC-CCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHH
Q 016612 11 TLLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTR-SGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT 87 (386)
Q Consensus 11 ~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~-~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~ 87 (386)
.+.+++..+ +.++|..+|.+.++........ ...+. ...+...++++.|+++.+.+...+++||++|+.+.+
T Consensus 35 ~~ylD~~~g~~~~~lGh~~p~v~~a~~~~~~~~-----~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~Al 109 (397)
T TIGR03246 35 KEYIDFAGGIAVNALGHAHPELVKALIEQADKL-----WHIGNGYTNEPVLRLAKKLVDATFADKVFFCNSGAEANEAAL 109 (397)
T ss_pred CEEEECCcCHhhccCCCCCHHHHHHHHHHHHhc-----ccccCccCCHHHHHHHHHHHhhCCCCEEEEeCCcHHHHHHHH
Confidence 356666533 7889998877766432221110 01111 134578899999999988888999999999986443
Q ss_pred Hhc---------CCCCEEEecCCCCCcH-HHHHhhhcc---------cCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCC
Q 016612 88 HLL---------GTGEEIVAGDDLYGGT-DRLLSRVTP---------KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 88 ~~~---------~~g~~Vlv~~~~~~~~-~~~~~~~~~---------~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~ 148 (386)
.+. ...+.|+..+..|++. ...+ .... .....+..++..|++++++.+.+++++|+++.+
T Consensus 110 k~ar~~~~~~~~~~r~~ii~~~~~yHG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epi 188 (397)
T TIGR03246 110 KLARRYALDKHGADKSEIVAFKNSFHGRTLFTV-SVGGQPKYSQGFAPLPGGIKHAPYNDLAAAKALISDKTCAVIVEPI 188 (397)
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCccHHHH-HhcCCcccccCCCCCCCceEEeCCCCHHHHHHHhccCeEEEEEecc
Confidence 322 1235667666666554 3222 1111 011234567778999999999888999999988
Q ss_pred CCCCcccc----cHHHHHHHHHHcCCEEEEeCCCCC----CCccC--CCCCCccEEEeccccccccCCCceEEEEEEcCh
Q 016612 149 TNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS----PVLSR--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 149 ~nptG~~~----~l~~i~~la~~~~~~li~D~a~~~----~~~~~--~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
+++.|.+. .+++|.++|++||+++|+||++.. |.... ......|++ +++|.++ +|+++|+++++ +
T Consensus 189 ~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~Gr~G~~~a~~~~gv~pDi~--t~~K~lg--gG~pigav~~~-~ 263 (397)
T TIGR03246 189 QGEGGVVPADPAFLKGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDIL--TSAKALG--GGFPIGAMLTT-T 263 (397)
T ss_pred cCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhcCCccccchhhhhcCCCCCEE--Eeehhhh--CCcceeEEEEc-H
Confidence 88777664 289999999999999999999831 11111 112346766 6799995 36889999987 4
Q ss_pred hHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccC
Q 016612 219 RLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 296 (386)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 296 (386)
++.+.+.........+.++..+.+++..++.+. ...++..+..+.+.+.|++... .++ ...+.+
T Consensus 264 ~i~~~~~~~~~~~t~~~~p~~~aaa~a~l~~~~~~~l~~~~~~~~~~l~~~L~~l~~----------~~~----~~~~vr 329 (397)
T TIGR03246 264 EIAAHLKVGTHGTTYGGNPLACAVAGKVLDLVNTPELLAGVKQRHDLFVDGLEKINA----------RYN----VFSEIR 329 (397)
T ss_pred HHHHhccCCCcCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh----------cCC----CeEeee
Confidence 565555322222222345555555544443321 1233334444444444443210 000 011224
Q ss_pred CCCceEEEEeCC--HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCCh
Q 016612 297 GAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDV 370 (386)
Q Consensus 297 ~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~ 370 (386)
+.|.++.+.+.+ ......+.+.+...|+.+.+. +++++|++++ .+++
T Consensus 330 g~G~~~~i~~~~~~~~~~~~~~~~l~~~Gv~~~~~---------------------------g~~~lR~~p~~~~t~~~i 382 (397)
T TIGR03246 330 GKGLLIGAVLTEAYQGKAKQFVNAAAEEGVIALIA---------------------------GPNVVRFAPSLVISDDDI 382 (397)
T ss_pred cCceEEEEEEcCchhhHHHHHHHHHHHCCeEEeec---------------------------CCCEEEEeCCCCCCHHHH
Confidence 567788877743 234667777777777754321 1345999764 4788
Q ss_pred HHHHHHHHHHHhc
Q 016612 371 NDLISDLDKALRT 383 (386)
Q Consensus 371 ~~~i~~l~~~l~~ 383 (386)
++.++.|.+++++
T Consensus 383 ~~~~~~l~~~l~~ 395 (397)
T TIGR03246 383 DEGLARFERAIEQ 395 (397)
T ss_pred HHHHHHHHHHHHH
Confidence 8888888888765
No 237
>KOG1359 consensus Glycine C-acetyltransferase/2-amino-3-ketobutyrate-CoA ligase [Amino acid transport and metabolism]
Probab=99.84 E-value=3.3e-20 Score=156.51 Aligned_cols=325 Identities=20% Similarity=0.235 Sum_probs=210.0
Q ss_pred CCccceeeccCCCCCCCCCcccceeeeeeeecCCCCCCC--CccccCC--CCc-hHHHHHHHHHhhcCCCceEEeCcHHH
Q 016612 7 PGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENG--PYDYTRS--GNP-TRDALESLLAKLDKADRALCFTSGMA 81 (386)
Q Consensus 7 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~--~~~y~~~--g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~ 81 (386)
.+.+..++|++ .|+|+|..+-|..-.... .+..+. +....+. |.. ..+.+|..++++.+.++.++..+|..
T Consensus 63 ~G~~k~ilnFc-aNnYLGLsshPeii~a~~---~aleeyGaGlssvrfIcGtq~iHk~LE~kiAqfh~rED~ilypscfd 138 (417)
T KOG1359|consen 63 KGSDKKILNFC-ANNYLGLSSHPEIINAGQ---KALEEYGAGLSSVRFICGTQDIHKLLESKIAQFHGREDTILYPSCFD 138 (417)
T ss_pred eccccceeeec-ccccccccCChHHHHHHH---HHHHHhCCCccceeEEecchHHHHHHHHHHHHHhCCCceEEeccccc
Confidence 35678899999 999999988775432111 111111 2222333 665 78999999999999999999999997
Q ss_pred HHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHH-HHHhhhCCCceEEEEeCCCCCCcccccHH
Q 016612 82 ALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD-EVASAIGPWTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 82 al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~-~l~~~~~~~~~~v~~~~~~nptG~~~~l~ 159 (386)
|.. ++.++++|.|.|+..+..|.+...-+ +++++++ +++.-|++ .+.+..+.+-++|+.+..-.+.|.+.|++
T Consensus 139 ANag~feail~pedAvfSDeLNhASIIdGi-rLckry~----h~dv~~l~~~l~~a~k~r~klv~TDg~FSMDGdiaPl~ 213 (417)
T KOG1359|consen 139 ANAGAFEAILTPEDAVFSDELNHASIIDGI-RLCKRYR----HVDVFDLEHCLISACKMRLKLVVTDGVFSMDGDIAPLE 213 (417)
T ss_pred cchHHHHHhcChhhhhhccccccchhhhhh-HHHhhhc----cchhHHHHHHHHHhhhheEEEEEecceeccCCCcccHH
Confidence 754 66778999999998888887776554 4454332 33333332 22233445788999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCccCCC---------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh-
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPVLSRPL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN- 229 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~~~~~~---------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~- 229 (386)
+|.+++++||.++++||+|+++.+.... .-+.|++.++++|.++|.. +|+..++.+ +.+.++...+
T Consensus 214 ei~~La~kYgaLlfiDecHaTgf~G~tGrGt~E~~~vm~~vdiinsTLgKAlGga~---GGyttgp~~-li~llrqr~Rp 289 (417)
T KOG1359|consen 214 EISQLAKKYGALLFIDECHATGFFGETGRGTAEEFGVMGDVDIINSTLGKALGGAS---GGYTTGPKP-LISLLRQRSRP 289 (417)
T ss_pred HHHHHHHhcCcEEEEeecccceeecCCCCChHHHhCCCCcceehhhhhhhhhcCCC---CCCccCChh-HHHHHHhcCCc
Confidence 9999999999999999999987764211 1246899999999997655 699998754 5444433222
Q ss_pred -hcCCCCChhhHHHHHhcCC---cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE
Q 016612 230 -AEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL 305 (386)
Q Consensus 230 -~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~ 305 (386)
.+...+++........++. .-...+...+.+.+++.++.+... +...+ ...++..+.
T Consensus 290 ylFSnslppavV~~a~ka~dllm~s~~~i~~~~a~~qrfr~~me~aG----ftIsg---------------~~hPI~pv~ 350 (417)
T KOG1359|consen 290 YLFSNSLPPAVVGMAAKAYDLLMVSSKEIQSRQANTQRFREFMEAAG----FTISG---------------ASHPICPVM 350 (417)
T ss_pred eeecCCCChhhhhhhHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhcC----ceecC---------------CCCCcccee
Confidence 2334444432222222211 112333444566666666665432 11111 123667777
Q ss_pred eCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 016612 306 TGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 381 (386)
Q Consensus 306 ~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 381 (386)
+.+...+.++.+++...|+.+-. +++|.. +.+.-.||+.++. ++++++|+++.++.
T Consensus 351 lGda~lA~~~ad~lLk~Gi~Vig------fs~PvV--------------P~gkariRVqiSAaHt~edid~~i~Af~~vg 410 (417)
T KOG1359|consen 351 LGDARLASKMADELLKRGIYVIG------FSYPVV--------------PKGKARIRVQISAAHTEEDIDRLIEAFSEVG 410 (417)
T ss_pred cccHHHHHHHHHHHHhcCceEEe------ecCCcC--------------CCCceEEEEEEehhcCHHHHHHHHHHHHHHH
Confidence 88888888999999888886432 222311 1123458888875 56666666666555
Q ss_pred hc
Q 016612 382 RT 383 (386)
Q Consensus 382 ~~ 383 (386)
+.
T Consensus 411 r~ 412 (417)
T KOG1359|consen 411 RF 412 (417)
T ss_pred Hh
Confidence 43
No 238
>cd00615 Orn_deC_like Ornithine decarboxylase family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major groups in this CD corresponds to ornithine decarboxylase (ODC), arginine decarboxylase (ADC) and lysine decarboxylase (LDC). ODC is a dodecamer composed of six homodimers and catalyzes the decarboxylation of tryptophan. ADC catalyzes the decarboxylation of arginine and LDC catalyzes the decarboxylation of lysine. Members of this family are widely found in all three forms of life.
Probab=99.84 E-value=5.1e-20 Score=166.37 Aligned_cols=156 Identities=22% Similarity=0.281 Sum_probs=123.6
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-------
Q 016612 56 TRDALESLLAKLDKADRALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------- 126 (386)
..+++++.+++++|.++.+++++| ++++. ++.+++++||+|++++++|.+....+ ...|+++++++.
T Consensus 60 ~i~~~~~~~A~~~ga~~~~~~~~Gst~a~~~~l~al~~~gd~Vlv~~~~h~s~~~~~----~~~g~~~~~v~~~~~~~~~ 135 (294)
T cd00615 60 PIKEAQELAARAFGAKHTFFLVNGTSSSNKAVILAVCGPGDKILIDRNCHKSVINGL----VLSGAVPVYLKPERNPYYG 135 (294)
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCcHHHHHHHHHHHcCCCCCEEEEeCCchHHHHHHH----HHCCCEEEEecCccCcccC
Confidence 689999999999999877764555 57775 56778999999999999998886443 356777777653
Q ss_pred ----CCHHHHHhhhC--CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-----cc-CCCCCCccEE
Q 016612 127 ----CDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LS-RPLELGADIV 194 (386)
Q Consensus 127 ----~d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-----~~-~~~~~~~di~ 194 (386)
.|++++++.++ ++++++++++| |++|.+.|+++|.++|+++|+++++|++|+... .+ +....++|++
T Consensus 136 ~~~~i~~~~l~~~l~~~~~~k~v~l~~p-~~~G~~~dl~~I~~~~~~~g~~livDeA~~~~~~~~~~~~~~~~~~~~div 214 (294)
T cd00615 136 IAGGIPPETFKKALIEHPDAKAAVITNP-TYYGICYNLRKIVEEAHHRGLPVLVDEAHGAHFRFHPILPSSAAMAGADIV 214 (294)
T ss_pred cCCCCCHHHHHHHHHhCCCceEEEEECC-CCCCEecCHHHHHHHHHhcCCeEEEECcchhhhccCcccCcchhhcCCcEE
Confidence 27899999885 47899999998 689999999999999999999999999987421 11 2234589999
Q ss_pred EeccccccccCCCceEEEEEEcCh
Q 016612 195 MHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
+.|+||+++|+.+ +|++..+++
T Consensus 215 ~~S~hK~l~g~~~--~~~l~~~~~ 236 (294)
T cd00615 215 VQSTHKTLPALTQ--GSMIHVKGD 236 (294)
T ss_pred EEchhcccchHhH--HHHHHhCCC
Confidence 9999999876543 566666543
No 239
>PRK05093 argD bifunctional N-succinyldiaminopimelate-aminotransferase/acetylornithine transaminase protein; Reviewed
Probab=99.84 E-value=1.9e-19 Score=170.08 Aligned_cols=320 Identities=17% Similarity=0.208 Sum_probs=190.6
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH 88 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~ 88 (386)
+.+++..+ +.++|..+|.+.++...... +. ..++.. ..+...++++.++++.+.+..++++||++|+.+++.
T Consensus 41 ~~iD~~~~~~~~~lGh~~p~v~~a~~~~~~---~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~sGseA~e~a~k 115 (403)
T PRK05093 41 EYIDFAGGIAVTALGHCHPALVKALKEQGE---KL--WHISNVFTNEPALRLAKKLIDATFAERVFFANSGAEANEAAFK 115 (403)
T ss_pred EEEEcCcCHHhccCCCCCHHHHHHHHHHHH---hc--CcccCccCCHHHHHHHHHHHhhCCCCEEEEeCchHHHHHHHHH
Confidence 45666523 67899977776653221111 10 111111 345567899999998877889999999988764433
Q ss_pred hc---------CCCCEEEecCCCCCcH-HHHHh--------hhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 89 LL---------GTGEEIVAGDDLYGGT-DRLLS--------RVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 89 ~~---------~~g~~Vlv~~~~~~~~-~~~~~--------~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
+. ...+.|+..+..|++. ...+. .........+..++..|++++++.+.+++++|+++ |.|
T Consensus 116 lar~~~~~~~~~~~~~ii~~~~~~HG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaiiie-p~~ 194 (403)
T PRK05093 116 LARRYACDRHGPEKTEIIAFHNSFHGRTLFTVSVGGQPKYSDGFGPKPADITHVPFNDLAAVKAVIDDHTCAVVVE-PIQ 194 (403)
T ss_pred HHHHHHhhcCCCCCCeEEEEcCCcCCchhhhHhhcCChhhhhcCCCCCCCcEEeCCCCHHHHHHHhcCCeEEEEEe-ccc
Confidence 22 1234577666666554 32211 00111223466777789999999998889999999 555
Q ss_pred CCcccc-c----HHHHHHHHHHcCCEEEEeCCCCC-CCccCC-----CCCCccEEEeccccccccCCCceEEEEEEcChh
Q 016612 151 PRQQIC-D----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 151 ptG~~~-~----l~~i~~la~~~~~~li~D~a~~~-~~~~~~-----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~ 219 (386)
++|.+. + +++|.++|++||+++|+||+|+. +..... .....|+ .|+||.++ +|+|+|+++++ +.
T Consensus 195 ~~gg~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi--~s~sK~l~--~G~rig~vv~~-~~ 269 (403)
T PRK05093 195 GEGGVIPATPEFLQGLRELCDQHNALLIFDEVQTGMGRTGDLFAYMHYGVTPDI--LTSAKALG--GGFPIGAMLTT-AE 269 (403)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCCCccchhhhhcCCCCCE--EEeccccc--CCcceEEEEEc-HH
Confidence 565553 3 89999999999999999999872 111111 1223554 57899996 47899999997 44
Q ss_pred HHHHHHHhhhhcCCCCChhhHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCC
Q 016612 220 LAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 297 (386)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 297 (386)
+.+.+.........+.++..++++...++.+ ....+...++.+.+.+.|++... .. .+ ....++
T Consensus 270 i~~~l~~~~~~~t~~~~~~~~~aa~a~L~~~~~~~~~~~~~~~~~~l~~~L~~~~~-------~~------~~-~~~~~~ 335 (403)
T PRK05093 270 IASHFKVGTHGSTYGGNPLACAVAEAVFDIINTPEVLEGVKARRQRFVDGLQKINQ-------KY------GV-FSEIRG 335 (403)
T ss_pred HHhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh-------hC------CC-eEeEee
Confidence 5554433222223345566665555544322 12233444455555555554310 00 00 012244
Q ss_pred CCceEEEEeCCH--HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChH
Q 016612 298 AGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVN 371 (386)
Q Consensus 298 ~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~ 371 (386)
.|.++++.++.. ....++.+.+...|+.+.++ +.+++|++++. ++++
T Consensus 336 ~G~~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---------------------------g~~~lRl~~~~~~~~~~i~ 388 (403)
T PRK05093 336 MGLLIGAELKPQYKGRARDFLNAAAEEGVMVLVA---------------------------GPDVLRFAPSLVIEEADID 388 (403)
T ss_pred CceEEEEEecCcchhHHHHHHHHHHHCCeEEecC---------------------------CCCEEEEeCCCCCCHHHHH
Confidence 577788887432 24567777777777765431 13569998653 6777
Q ss_pred HHHHHHHHHHhc
Q 016612 372 DLISDLDKALRT 383 (386)
Q Consensus 372 ~~i~~l~~~l~~ 383 (386)
+.++.|.+++++
T Consensus 389 ~~~~~l~~~l~~ 400 (403)
T PRK05093 389 EGLARFEKAVAK 400 (403)
T ss_pred HHHHHHHHHHHH
Confidence 778888777754
No 240
>PRK13580 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=1.7e-18 Score=161.90 Aligned_cols=283 Identities=18% Similarity=0.147 Sum_probs=181.4
Q ss_pred HHHHHHhhcCCC-ceEEeCcHHHHH-HHHHHhcCC-------------------------------CCEEEecCCCCCcH
Q 016612 60 LESLLAKLDKAD-RALCFTSGMAAL-AAVTHLLGT-------------------------------GEEIVAGDDLYGGT 106 (386)
Q Consensus 60 l~~~l~~~~g~~-~~i~~~~gt~al-~~~~~~~~~-------------------------------g~~Vlv~~~~~~~~ 106 (386)
..+++.++||.+ ..+-.-||+.|. .+..++++| ||+|+..++.++++
T Consensus 100 ~~~ra~~lf~a~~anvqp~Sg~~An~~v~~all~~~~~~p~~~~~g~~~~~~~~~~~~~~~~~~~~gd~i~~l~l~~GGH 179 (493)
T PRK13580 100 AAEHAKELFGAEHAYVQPHSGADANLVAFWAILAHKVESPALEKLGAKTVNDLTEEDWEALRAELGNQRLLGMSLDSGGH 179 (493)
T ss_pred HHHHHHHHhCCCcccccCCCcHHHHHHHHHHHhcccccCcchhccccccccccchhhhhhhhccCCCCEEEeecCCCCCe
Confidence 456677889998 455667888775 466778876 79999877766554
Q ss_pred HHHHhhhcccCC--cEEEEeCC------CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 107 DRLLSRVTPKTG--VVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 107 ~~~~~~~~~~~g--~~~~~v~~------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
..+- ......+ .+...++. .|.+++++.+.++++.|++++.+|. +...|+++|.++|+++|+++++|++|
T Consensus 180 lthg-~~~n~~~~~~~~~~y~vd~~~g~iD~d~l~~~~~~~~plvii~g~S~~-~~~~dl~~i~eia~~~gA~L~VD~AH 257 (493)
T PRK13580 180 LTHG-FRPNISGKMFHQRSYGVDPDTGLLDYDEIAALAREFKPLILVAGYSAY-PRRVNFAKLREIADEVGAVLMVDMAH 257 (493)
T ss_pred eecC-cccchhhheeeeEecccCcccCccCHHHHHHHHhhcCCEEEEeCcccc-CCCcCHHHHHHHHHHcCCEEEEECch
Confidence 2110 0001111 22222222 3899999999999999999999997 55889999999999999999999999
Q ss_pred CCCCcc--------CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh-hhcCCCCChhhHHHHHhc---
Q 016612 179 MSPVLS--------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRG--- 246 (386)
Q Consensus 179 ~~~~~~--------~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--- 246 (386)
+.|++. .+. .++|++++|+||++.||. +|++++++ .+.+.+.... ...+...++..++.+...
T Consensus 258 ~~Gligg~~~~~~~~~~-~~~D~vtgT~hKaL~GP~---GG~I~~~~-~l~~~L~~a~P~i~gg~l~p~iAA~avAl~e~ 332 (493)
T PRK13580 258 FAGLVAGKVFTGDEDPV-PHADIVTTTTHKTLRGPR---GGLVLAKK-EYADAVDKGCPLVLGGPLPHVMAAKAVALAEA 332 (493)
T ss_pred hhceeccccchhhcCCC-CCCcEEEeCChhhccCCC---eEEEEecH-HHHHHHhhCCCcccCCCccHHHHHHHHHHHHH
Confidence 987754 122 368999999999997765 69999874 4555443222 223344444333222221
Q ss_pred C-CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHh-HHHHHhhcCccee
Q 016612 247 V-KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL-SKHVVETTKYFSI 324 (386)
Q Consensus 247 ~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~-~~~l~~~l~~~gi 324 (386)
. .....+.++..+|++.+.+.|.+.. ++-..+ ...++++.+.+.+... ...+.+.|...||
T Consensus 333 ~~~ef~~y~~~l~~Na~~La~~L~~~G---------~~vv~g--------gTdshIV~V~lg~~~~~g~~a~~~L~e~GI 395 (493)
T PRK13580 333 RTPEFQKYAQQVVDNARALAEGFLKRG---------ARLVTG--------GTDNHLVLIDVTSFGLTGRQAESALLDAGI 395 (493)
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHhcC---------CCccCC--------CCCCCEEEEEeCCHHHHHHHHHHHHHHCCe
Confidence 1 1224467888899999999888753 111100 1245888998866543 3356667777777
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--------CChHHHHHHHHHHHhc
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--------EDVNDLISDLDKALRT 383 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--------~~~~~~i~~l~~~l~~ 383 (386)
.++. +.+|..... ......|||++.. ++++++++.|.++++.
T Consensus 396 ~vn~------i~~Ptvp~g-----------~~~~srLRIg~~A~ttrg~teedi~~iad~l~~~l~~ 445 (493)
T PRK13580 396 VTNR------NSIPSDPNG-----------AWYTSGIRLGTPALTTLGMGSDEMDEVAELIVKVLSN 445 (493)
T ss_pred EEcc------ccCCCCCCC-----------CCCCceEEeccchhhhcCCCHHHHHHHHHHHHHHHHh
Confidence 6543 222321100 0124569999753 6778888888777753
No 241
>PTZ00125 ornithine aminotransferase-like protein; Provisional
Probab=99.83 E-value=2.3e-19 Score=169.67 Aligned_cols=288 Identities=16% Similarity=0.179 Sum_probs=175.4
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhc-----------CCCCEEEecCCCCCcHHHHHhhhccc------
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL-----------GTGEEIVAGDDLYGGTDRLLSRVTPK------ 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~-----------~~g~~Vlv~~~~~~~~~~~~~~~~~~------ 116 (386)
.+..+.+++.++++.+.+..++++||++|+.+.+.+. ..+++|++.+..|++...........
T Consensus 72 ~~~~~~~~~~l~~~~~~~~~~~~~SGs~A~e~al~~~~~~~~~~~~~~~~~~~vl~~~~~~Hg~~~~~~~~~~~~~~~~~ 151 (400)
T PTZ00125 72 NDVLGLAEKYITDLFGYDKVLPMNSGAEAGETALKFARKWGYEVKGIPENQAKIIFCNGNFSGRTIGACSASTDPKCYNN 151 (400)
T ss_pred CHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhccCCCCCCCeEEEECCCcCCccHHHHhhcCCcchhcc
Confidence 3577889999999888888999999999876443322 13467887777776653221111110
Q ss_pred ---CCcEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc---
Q 016612 117 ---TGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS--- 184 (386)
Q Consensus 117 ---~g~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~--- 184 (386)
....+..++..|++++++.+. +++++|++++++||+|.+.+ +++|.++|++||+++|+||+++ .+...
T Consensus 152 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~v~~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~lli~Dev~~g~g~~G~~~ 231 (400)
T PTZ00125 152 FGPFVPGFELVDYNDVEALEKLLQDPNVAAFIVEPIQGEAGVIVPDDGYLKQVYELCKKYNVLLIVDEIQTGLGRTGKLL 231 (400)
T ss_pred CCCCCCCceEeCCCCHHHHHHHhCCCCeEEEEEcCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhh
Confidence 001234455669999999986 78999999999999999987 9999999999999999999985 22111
Q ss_pred --CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHH
Q 016612 185 --RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQ 262 (386)
Q Consensus 185 --~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (386)
.......|+++ ++|++++ ++.++|++++++ ++.+.+.........+.++..+.++...++.+.. +...++.+
T Consensus 232 ~~~~~~~~pd~~~--~sK~l~~-g~~~ig~v~~~~-~~~~~~~~~~~~~t~~~~~~~~~aa~~~l~~i~~--~~~~~~~~ 305 (400)
T PTZ00125 232 AHDHEGVKPDIVL--LGKALSG-GLYPISAVLAND-DVMLVIKPGEHGSTYGGNPLACAVAVEALEVLKE--EKLAENAQ 305 (400)
T ss_pred HHHhcCCCCCEEE--EcccccC-CCcCcEEEEEcH-HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHH
Confidence 11123457765 5799964 334789999874 4555443322222234455555555444433211 11222333
Q ss_pred HHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 263 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 263 ~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
.+.+++.+.- ... +...+.. ...++.|.++++.++. ......+.+.+...|+.+.++.
T Consensus 306 ~~~~~l~~~l--~~l----~~~~~~~----~~~~~~g~~~~v~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------- 365 (400)
T PTZ00125 306 RLGEVFRDGL--KEL----LKKSPWV----KEIRGKGLLNAIVFDHSDGVNAWDLCLKLKENGLLAKPTH---------- 365 (400)
T ss_pred HHHHHHHHHH--HHH----HhcCCCe----EEEecccEEEEEEEccCcchHHHHHHHHHHHCCeEEeecC----------
Confidence 3333322210 000 0111100 0113456778887743 3345667777777777654321
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.++|||++. .++++++++.|.+++++.
T Consensus 366 -----------------~~~lRi~~~~~~~~~~i~~~l~~l~~~l~~~ 396 (400)
T PTZ00125 366 -----------------DNIIRFAPPLVITKEQLDQALEIIKKVLKSF 396 (400)
T ss_pred -----------------CCEEEEECCccCCHHHHHHHHHHHHHHHHHH
Confidence 346999964 478888899998888764
No 242
>PTZ00094 serine hydroxymethyltransferase; Provisional
Probab=99.83 E-value=7.5e-19 Score=167.86 Aligned_cols=153 Identities=20% Similarity=0.161 Sum_probs=111.6
Q ss_pred HHHHHHhhcCCC-ceE-Ee---CcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcc------cCCcEEEEeCCC
Q 016612 60 LESLLAKLDKAD-RAL-CF---TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTP------KTGVVVKRVNTC 127 (386)
Q Consensus 60 l~~~l~~~~g~~-~~i-~~---~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~------~~g~~~~~v~~~ 127 (386)
.++.+++++|.+ +.+ +. +||+++..+ +.+++++||+|++.+..|+++...+....+ ..+.++..++.+
T Consensus 85 ar~~~a~lf~a~~~~~~~~~~~~sgt~an~~v~~al~~~gd~Ii~~~~ehg~~l~~~~~l~~~~~~~~~~~~~~~~~~~~ 164 (452)
T PTZ00094 85 CQKRALEAFGLDPEEWGVNVQPYSGSPANFAVYTALLQPHDRIMGLDLPSGGHLTHGFYTAKKKVSATSIYFESLPYQVN 164 (452)
T ss_pred HHHHHHHHhCCCcccceeecCCCchHHHHHHHHHHhcCCCCEEEecccccCCcccccccccccccccceeeeeeeecccC
Confidence 456888999987 333 33 578888764 777899999999999899887543321111 111333343332
Q ss_pred -----CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCCCccEEEe
Q 016612 128 -----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMH 196 (386)
Q Consensus 128 -----d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~di~~~ 196 (386)
|++++++.++ .+++++++. ++.+|...|+++|.++|+++|+++++|++|+.|.+. .+.. ++|++++
T Consensus 165 ~~g~id~~~L~~~l~~~~~~lvi~~--~s~~g~~~di~~I~~i~~~~ga~l~vDaaq~~G~i~~~~~~~~~~-~~D~l~~ 241 (452)
T PTZ00094 165 EKGLIDYDKLEELAKAFRPKLIIAG--ASAYPRDIDYKRFREICDSVGAYLMADIAHTSGLVAAGVLPSPFP-YADVVTT 241 (452)
T ss_pred CCCCcCHHHHHHHHHHhCCCEEEEe--CCCCCCccCHHHHHHHHHHcCCEEEEeccchhccccCCCCCCCCC-CCcEEEc
Confidence 8999999985 367777764 234899999999999999999999999999988763 2322 7999999
Q ss_pred ccccccccCCCceEEEEEEcCh
Q 016612 197 SATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 197 S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
|+|||+.||. +|+++++++
T Consensus 242 S~hK~l~GP~---Gg~l~~~~~ 260 (452)
T PTZ00094 242 TTHKSLRGPR---SGLIFYRKK 260 (452)
T ss_pred CCccCCCCCC---ceEEEEecc
Confidence 9999998876 477777643
No 243
>COG3977 Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase [Amino acid transport and metabolism]
Probab=99.83 E-value=1.1e-18 Score=147.78 Aligned_cols=298 Identities=19% Similarity=0.259 Sum_probs=182.8
Q ss_pred cccCC-CC-chHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHHHHHh----cCCCC--EEE-ecCCCCCcHHHHHhhhc
Q 016612 48 DYTRS-GN-PTRDALESLLAKLDKAD---RALCFTSGM-AALAAVTHL----LGTGE--EIV-AGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 48 ~y~~~-g~-~~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~~~~~----~~~g~--~Vl-v~~~~~~~~~~~~~~~~ 114 (386)
.|+-+ |. ++.+++.+.+.+-+|.. +.|..|+|+ .+..-+..+ ...|+ .|+ --.|.|-+|..+ .
T Consensus 69 nY~~pQG~~~li~ala~~l~~~ygwnit~~NIalTnGSQs~fFYlfNlF~G~~sdG~~k~illPLaPeYiGY~d~----~ 144 (417)
T COG3977 69 NYDGPQGKAVLIDALAKMLRREYGWNITAQNIALTNGSQSAFFYLFNLFAGRRSDGTEKKILLPLAPEYIGYADA----G 144 (417)
T ss_pred cCCCCcchhHHHHHHHHHHHHHhCCCCccceeeecCCccchHHHHHHHhcCccCCCcceeEeeccChhhcccccc----c
Confidence 45544 76 48999999999999875 678888887 554333332 23343 344 456888777422 1
Q ss_pred ccCCcEEEEeCC-------------CCHHHHHhhhCCCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCC
Q 016612 115 PKTGVVVKRVNT-------------CDLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 115 ~~~g~~~~~v~~-------------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~ 178 (386)
..- --++.+.+ .|.+++. +.+++.+|+++-|.||||.+. .+.+|-++|++||+++++|.+|
T Consensus 145 l~~-d~fVs~kP~iel~~~g~FKY~vDF~~l~--i~e~~g~ic~SRPtNPTGNVlTdeE~~kldalA~~~giPliIDnAY 221 (417)
T COG3977 145 LEE-DLFVSAKPNIELLPAGQFKYHVDFEHLH--IGESTGAICVSRPTNPTGNVLTDEELAKLDALARQHGIPLIIDNAY 221 (417)
T ss_pred cCc-cceeeccCCcccccccceeeccCHHHcc--cccccceEEecCCCCCCCCcccHHHHHHHHHHhhhcCCcEEEeccc
Confidence 111 11122111 1555544 457899999999999999997 4889999999999999999999
Q ss_pred CCCCcc----C--CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---
Q 016612 179 MSPVLS----R--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT--- 249 (386)
Q Consensus 179 ~~~~~~----~--~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 249 (386)
+.+... + +.-.++.+.|+|+||. |.+|.|+|+++.+ +++.+.+...............++.+.+.++.
T Consensus 222 g~PFP~iifsd~~~~w~~NiilC~SLSK~--GLPG~R~GIiIan-e~viqaitnmn~iisLap~~~G~Aia~~mie~gdl 298 (417)
T COG3977 222 GVPFPGIIFSDATPLWNENIILCMSLSKL--GLPGSRCGIIIAN-EKVIQAITNMNGIISLAPGRMGPAIAAEMIESGDL 298 (417)
T ss_pred CCCCCceecccccccCCCCEEEEeehhhc--CCCCcceeEEEcc-HHHHHHHHhccceeeecCCCccHHHHHHHhhcchH
Confidence 976532 1 2223678999999996 6778999999986 55666555544322222222223332222211
Q ss_pred --HH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe--CCHHhHHHHHhhcCcce
Q 016612 250 --MA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT--GSLALSKHVVETTKYFS 323 (386)
Q Consensus 250 --~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~g 323 (386)
+. ..+.-+.+..+.....+++. +++.+ +.+. ++.|.+|.|-. +-+...+.++++++..|
T Consensus 299 ~rlseqVIrPFY~~~~q~~~~~l~~~----------lp~~~-~~iH----kpEGAIFlWLWf~dLPItt~~LYq~LKa~G 363 (417)
T COG3977 299 LRLSEQVIRPFYRNRVQTTIAILRRY----------LPEYR-CLIH----KPEGAIFLWLWFKDLPITTEELYQRLKARG 363 (417)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHHHHh----------cCccc-eeee----cCCcceeehhhhccCCCCHHHHHHHHHhCe
Confidence 11 01112223333333444331 11111 1111 34677777764 44667889999999999
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHhcC
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~~~ 384 (386)
+.+-+|+.+ +|.. +.+|.+ ...++|+|.. .+.++.-++.|.+.++++
T Consensus 364 vl~VPG~~F----FpGl------~~ewpH----~hqC~Rmn~~~~~~~ie~Gva~lae~ve~~ 412 (417)
T COG3977 364 VLMVPGHYF----FPGL------DKEWPH----THQCMRMNYVPEPEKIEKGVAILAEEVERA 412 (417)
T ss_pred EEEeccccc----CCCC------CCCCCC----ccceEEEecCCCHHHHHHHHHHHHHHHHHH
Confidence 998888752 2321 111111 1367999985 588888999998888763
No 244
>PRK12381 bifunctional succinylornithine transaminase/acetylornithine transaminase; Provisional
Probab=99.82 E-value=9.4e-19 Score=165.20 Aligned_cols=321 Identities=16% Similarity=0.181 Sum_probs=193.7
Q ss_pred eeeccCC--CCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh
Q 016612 12 LLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL 89 (386)
Q Consensus 12 ~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~ 89 (386)
+.+++.. ++.++|..+|++.++........... . ....++...++++.++++.+.+..++++||++|+...+.+
T Consensus 40 ~~lD~~~g~~~~~lGh~~p~v~~A~~~~~~~~~~~-~---~~~~~~~~~~la~~l~~~~~~~~v~~~~sGseA~e~Alk~ 115 (406)
T PRK12381 40 EYIDFAGGIAVNALGHAHPALREALNEQASKFWHT-G---NGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALKL 115 (406)
T ss_pred EEEEcCcCHhhccCCCCCHHHHHHHHHHHhhcccc-c---CccCCHHHHHHHHHHHhhCCCCeEEEcCCcHHHHHHHHHH
Confidence 4556542 36789998888776433222111000 1 1113456778999999988878899999999998644332
Q ss_pred c---------CCCCEEEecCCCCCcHHHHHhhhcccC---------CcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 90 L---------GTGEEIVAGDDLYGGTDRLLSRVTPKT---------GVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 90 ~---------~~g~~Vlv~~~~~~~~~~~~~~~~~~~---------g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
. ..+..|+..+..|++.......+.... -..+..++..|++++++.+++++++|+++ |.++
T Consensus 116 ar~~~~~~~~~~r~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aaviiE-Pv~~ 194 (406)
T PRK12381 116 ARKYAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPKYSQDFAPLPPDIRHAAYNDLNSASALIDDQTCAVIVE-PIQG 194 (406)
T ss_pred HHHHHhhcCCCCCCeEEEECCCcCCcchhHHhhcCCcccccCCCCCCCCeeEeCCCCHHHHHHhccCCeeEEEEe-CCcC
Confidence 1 245678888888877642211111100 01245566679999999998889999987 5677
Q ss_pred Ccccc-----cHHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChhH
Q 016612 152 RQQIC-----DIRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (386)
Q Consensus 152 tG~~~-----~l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~ 220 (386)
+|.+. .+++|.++|++||+++|+||++.. +.... ......|+ .|++|.++ +|+++|+++++ +++
T Consensus 195 ~gg~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~gr~G~~~~~~~~~v~pDi--~t~sK~l~--gG~~ig~~~~~-~~~ 269 (406)
T PRK12381 195 EGGVIPADKAFLQGLRELCDRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDV--LTTAKALG--GGFPIGAMLTT-EKC 269 (406)
T ss_pred CCCCcCCCHHHHHHHHHHHHHcCCEEEEcchhhCCCCCcchhhhHhhCCCCCE--EEehhhhh--CCCceEEEEEc-HHH
Confidence 77653 389999999999999999999842 21111 11224565 47899995 36899999987 456
Q ss_pred HHHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC
Q 016612 221 AKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 298 (386)
Q Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 298 (386)
.+.+.........+.++..+.++...++.+. ...++..+..+.+.+.|++... . .+ .....++.
T Consensus 270 ~~~~~~~~~~~t~~~~pl~~aaa~a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~~-------~---~~----~~~~vrg~ 335 (406)
T PRK12381 270 ASVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINA-------R---YG----LFSEIRGL 335 (406)
T ss_pred HhhcCCCCCCCCCCCCHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHh-------h---CC----CEEEEecC
Confidence 5544332222223445656555555443321 1223333444444444443210 0 00 01123456
Q ss_pred CceEEEEeCCH--HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHH
Q 016612 299 GSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 372 (386)
Q Consensus 299 ~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~ 372 (386)
|.++++.+... .....+.+.+..+|+.+... +++.+|++++. +++++
T Consensus 336 Gl~~~~~l~~~~~~~~~~~~~~l~~~Gv~v~~~---------------------------g~~~lRl~p~~~~t~~~i~~ 388 (406)
T PRK12381 336 GLLIGCVLNAEYAGKAKQISQEAAKAGVMVLIA---------------------------GPNVVRFAPALNISEEEITT 388 (406)
T ss_pred eEEEEEEecCchhhHHHHHHHHHHHCCcEEeeC---------------------------CCCEEEEeCCccCCHHHHHH
Confidence 78888887542 24567777787778765321 13459998763 77777
Q ss_pred HHHHHHHHHhc
Q 016612 373 LISDLDKALRT 383 (386)
Q Consensus 373 ~i~~l~~~l~~ 383 (386)
.++.|.+++++
T Consensus 389 ~~~~l~~~l~~ 399 (406)
T PRK12381 389 GLDRFARACER 399 (406)
T ss_pred HHHHHHHHHHH
Confidence 88888887765
No 245
>PRK03080 phosphoserine aminotransferase; Provisional
Probab=99.82 E-value=9.9e-19 Score=163.37 Aligned_cols=152 Identities=13% Similarity=0.090 Sum_probs=113.2
Q ss_pred chHHHHHHHHHhhcCCC---ceEEeC-cHHHHHHH-HHHhcCC-CCEEEecCCCCCcHHHHHhh-hcccCCc-EEEEeCC
Q 016612 55 PTRDALESLLAKLDKAD---RALCFT-SGMAALAA-VTHLLGT-GEEIVAGDDLYGGTDRLLSR-VTPKTGV-VVKRVNT 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~---~~i~~~-~gt~al~~-~~~~~~~-g~~Vlv~~~~~~~~~~~~~~-~~~~~g~-~~~~v~~ 126 (386)
...+++++.++++++.+ +.++++ |||.++++ +..++++ ++.|++ ...|++. |.. +.+..|+ +++.++.
T Consensus 48 ~~~~~~r~~l~~l~~~~~~~~v~~~~gs~T~~~~~~~~~l~~~~~~~vi~-~g~f~~~---~~~~~~~~~g~~~v~~~~~ 123 (378)
T PRK03080 48 ALLKRVIEGTRELLSLPEGYEVGIVPGSDTGAWEMALWSLLGARRVDHLA-WESFGSK---WATDVVKQLKLEDPRVLEA 123 (378)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchHHHHHHHHHhcCCCCcceEEE-eCHHHHH---HHHHHHhhcCCCCceEecc
Confidence 36888999999999963 355564 77899985 4556764 444444 4556543 223 3456787 7777764
Q ss_pred C-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccc
Q 016612 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKF 201 (386)
Q Consensus 127 ~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~ 201 (386)
+ |+++ ++. +++|.+++.+|.||...|+++|.+ +++|+++++|.+++.|+.+-..+ +.|++++|.+||
T Consensus 124 ~~g~~~d~~~----i~~-~~~V~~~h~~t~tG~~~pi~~I~~--~~~g~~~vVDa~qs~G~~pidv~-~iD~~~~s~~K~ 195 (378)
T PRK03080 124 DYGSLPDLSA----VDF-DRDVVFTWNGTTTGVRVPVARWIG--ADREGLTICDATSAAFALPLDWS-KLDVYTFSWQKV 195 (378)
T ss_pred CCCCCCCHhh----cCC-CCCEEEEecCCccceeccchhhcc--ccCCCeEEEecccccccCCCCHH-HCcEEEEehhhh
Confidence 3 4444 332 667999999999999999999999 88999999999999988753333 379999999999
Q ss_pred cccCCCceEEEEEEcChhH
Q 016612 202 IAGHSDVMAGVLAVKGERL 220 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~ 220 (386)
+++|+| .|+++.+++.+
T Consensus 196 l~~P~G--~g~l~v~~~~~ 212 (378)
T PRK03080 196 LGGEGG--HGMAILSPRAV 212 (378)
T ss_pred CCCCCc--eEEEEECHHHH
Confidence 999898 79999986544
No 246
>COG1103 Archaea-specific pyridoxal phosphate-dependent enzymes [General function prediction only]
Probab=99.82 E-value=4.5e-18 Score=142.18 Aligned_cols=281 Identities=20% Similarity=0.176 Sum_probs=192.9
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
|....+.+.+++++|.|..-++.+..++=.++ -+++++||.|++....|.++. -++++.|+.+..+|..
T Consensus 61 PpI~~F~~dlaeFlg~D~~R~t~GARe~KfavMhal~~~gd~vV~D~~aHYtty----vAAEragl~v~eVp~tg~Pey~ 136 (382)
T COG1103 61 PPIKDFLEDLAEFLGMDEVRVTAGAREAKFAVMHALCKEGDWVVVDSLAHYTTY----VAAERAGLNVAEVPNTGYPEYK 136 (382)
T ss_pred CcHHHHHHHHHHHhCCceeeecccchhhHHHHHHHhccCCCEEEEcCcchHHHH----HHHHhcCCeEEecCCCCCCceE
Confidence 55667777799999999777776666886654 558999999999999887775 5678999999999964
Q ss_pred -CHHHHHhhhC-------CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecc
Q 016612 128 -DLDEVASAIG-------PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (386)
Q Consensus 128 -d~~~l~~~~~-------~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~ 198 (386)
+++.+.+.++ +.+.+.+++++....|.+.|.++++++|+++|+++++..+|..|-.+ +..+.++|++++|.
T Consensus 137 i~~e~y~~viee~~~~~g~~~~lallTh~Dg~YGNl~Dakkva~ic~e~gvPlllN~AYt~Grmpvs~ke~g~DFiVgSG 216 (382)
T COG1103 137 ITPEGYAEVIEEVKDEGGDPPALALLTHVDGEYGNLADAKKVAKICREYGVPLLLNCAYTVGRMPVSGKEIGADFIVGSG 216 (382)
T ss_pred ecHHHHHHHHHHHHhccCCCceEEEEeccCCCcCCchhhHHHHHHHHHcCCceEeecceeeccccccccccCCCEEEecC
Confidence 5666555553 34788999999999999999999999999999999999999988765 44567999999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHH-HHHhhh--------hcCCCCChhhHHHHHhcCCcHHHHHHHHHHH---HHHHHH
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKE-LYFLQN--------AEGSGLAPFDCWICLRGVKTMALRVEKQQDN---AQKIAE 266 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~-~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~ 266 (386)
||+++..+ .+|++..+. +..+. ++.... ..|+....+....+.+++-....|..++.+. ++++..
T Consensus 217 HKsmAAs~--PiGvl~~~e-E~ae~V~r~Sg~~~~~KEvellGCT~rGapivTlmASfP~V~eRVkrWdeEv~kaR~fv~ 293 (382)
T COG1103 217 HKSMAASA--PIGVLAMSE-EWAEIVLRRSGRAFPKKEVELLGCTVRGAPIVTLMASFPHVVERVKRWDEEVEKARWFVA 293 (382)
T ss_pred ccchhccC--CeeEEeehh-HHHHHHHhhcccccccceeeeecccccCchHHHHHhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 99996543 389999874 44433 332211 2344444444555566676667777666654 444444
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--------CHHhHHHHHhhcCcceec-cCCCCccccccc
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSIT-VSFGSVKSLISM 337 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~gi~-~~~G~~~~~~~~ 337 (386)
.+++...+.+ | ...|.. .-++.|..+ .......++++|+.+||. +.+|..
T Consensus 294 elEkigg~~q-----l---------G~rPk~-HdLm~Fetp~f~eIakk~~r~gyFlY~ELK~RgI~GI~~G~T------ 352 (382)
T COG1103 294 ELEKIGGVKQ-----L---------GERPKN-HDLMKFETPVFHEIAKKHKRKGYFLYEELKKRGIHGIQPGQT------ 352 (382)
T ss_pred HHHHhhhHHH-----h---------CCCCcc-cceeeecCchHHHHHHhCcCCceeeHHHHHhcCccccccCce------
Confidence 4444331111 1 111111 122333321 122234567788888875 444432
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEe---ccCChHHHHHHHHHHHhcC
Q 016612 338 PCFMSHASIPVEVRQARGLTEDLVRISV---GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 338 p~~~~~~~~~~~~~~~~~~~~~~iRis~---~~~~~~~~i~~l~~~l~~~ 384 (386)
.+|.+|+ ++|.++..++.+++.+++.
T Consensus 353 ---------------------k~~K~svyGl~~Eqve~V~~afkeI~eky 381 (382)
T COG1103 353 ---------------------KYFKLSVYGLSWEQVEYVVDAFKEIAEKY 381 (382)
T ss_pred ---------------------eEEEEEeecCCHHHHHHHHHHHHHHHHhc
Confidence 3488886 5799999999999988764
No 247
>COG4992 ArgD Ornithine/acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.82 E-value=2.5e-19 Score=160.39 Aligned_cols=313 Identities=19% Similarity=0.231 Sum_probs=201.8
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-CCceEEeCcHHHHHHHHHHh---cC--C-
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVTHL---LG--T- 92 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g-~~~~i~~~~gt~al~~~~~~---~~--~- 92 (386)
-..+|..+|.+.++-......+......+ -++...++.+.|.+..+ .+..++.+||++|+.+.+.+ .. +
T Consensus 53 v~~lGH~hP~iv~al~~Q~~kl~h~sn~~----~~~~~~~la~~L~~~s~~~d~vff~NSGaEA~EaAiKlARk~~~~~~ 128 (404)
T COG4992 53 VNNLGHCHPALVEALKEQAEKLWHVSNLF----YNEPQAELAEKLVELSPFADRVFFCNSGAEANEAALKLARKYTGDPE 128 (404)
T ss_pred eeccCCCCHHHHHHHHHHHHHhhhccccc----CChHHHHHHHHHHhhCccccEEEEcCCcHHHHHHHHHHHHHHcCCCC
Confidence 44578888877764322111111111222 23578889999999996 77889999999999754432 22 2
Q ss_pred CCEEEecCCCCCc-HHHHH--------hhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc----HH
Q 016612 93 GEEIVAGDDLYGG-TDRLL--------SRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IR 159 (386)
Q Consensus 93 g~~Vlv~~~~~~~-~~~~~--------~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~ 159 (386)
..+|+....+|++ +...+ +..+...--.+.++|..|+++++++++++|.+|+++..+-..|.+.+ ++
T Consensus 129 k~~Iia~~nsFHGRT~galS~t~~~ky~~~F~Pl~~g~~~vpfnDi~al~~ai~~~taAvivEPIQGEgGV~~~~~~fl~ 208 (404)
T COG4992 129 KSKIIAFENSFHGRTLGALSATGQPKYRKGFGPLLPGFRHVPFNDIEALEAAIDEDTAAVIVEPIQGEGGVIPAPPEFLK 208 (404)
T ss_pred CcEEEEEcCCcCCccceeeeccCChhhccCCCCCCCCceecCCCCHHHHHHHhccCeEEEEEecccCCCCCCCCCHHHHH
Confidence 2356655555443 32211 11111111246677888999999999999999999999998888874 89
Q ss_pred HHHHHHHHcCCEEEEeCCCCC----CCccC--CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC
Q 016612 160 KIAEMAHAHGALLLVDNSIMS----PVLSR--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS 233 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~----~~~~~--~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~ 233 (386)
++.++|++||+++|.||+|.. |.+.. .....+||++ +.|.++| |+.+|.++.+ +.+...+..-.+.+.-
T Consensus 209 ~lr~lCd~~g~LLI~DEVQtG~GRTGk~fA~e~~gV~PDI~t--laK~LgG--G~PigA~la~-~~~~~~~~~G~HgSTf 283 (404)
T COG4992 209 ALRELCDEHGALLILDEVQTGLGRTGKLFAYEHYGVEPDILT--LAKALGG--GFPIGAMLAT-EEIASAFTPGDHGSTF 283 (404)
T ss_pred HHHHHHHHhCeEEEEeccccCCCccchHHHHHHhCCCCCEEE--eeccccC--CccceeeEEc-hhhhhcCCCCcccCCC
Confidence 999999999999999999862 33221 2234578885 6999976 4778988887 5455544444444445
Q ss_pred CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHH----HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH
Q 016612 234 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIA----EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 309 (386)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (386)
+-++..+++....++.+.. +...++.+... +.|++... -++-+. ..+++|-++.+.+...
T Consensus 284 GGNpLacAv~~a~l~~l~~--e~ll~~v~~~g~~~~~~L~~l~~----~~~~v~----------~vRG~GLmiGiel~~~ 347 (404)
T COG4992 284 GGNPLACAVALAVLEVLLE--EGLLENVREKGEYLLQRLRELKR----RYPLVK----------EVRGRGLMIGIELKEP 347 (404)
T ss_pred CcCHHHHHHHHHHHHHHcc--hhHHHHHHHHHHHHHHHHHHHhh----cCCcee----------eeecceeEEEEEecCc
Confidence 6677777666655543321 33344444444 44443211 111122 2378899999999665
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
..+..+.+.+...|+.+...+ ++.+|+.+. .+++++.+++++++|++.
T Consensus 348 ~~a~~~~~~~~~~gvL~~~a~---------------------------~~ViR~~PpL~i~~eei~~~~~~l~~~l~~~ 399 (404)
T COG4992 348 YRARDIVRALREEGVLVLPAG---------------------------PNVIRFLPPLVITEEEIDEALDALERALAAA 399 (404)
T ss_pred ccHHHHHHHHHHCCeEEecCC---------------------------CCeEEecCCccCCHHHHHHHHHHHHHHHHHh
Confidence 456777888888887644322 345888764 599999999999998764
No 248
>TIGR01788 Glu-decarb-GAD glutamate decarboxylase. This model represents the pyridoxal phosphate-dependent glutamate (alpha) decarboxylase found in bacteria (low and hi-GC gram positive, proteobacteria and cyanobacteria), plants, fungi and at least one archaon (Methanosarcina). The product of the enzyme is gamma-aminobutyrate (GABA).
Probab=99.82 E-value=2.8e-18 Score=161.15 Aligned_cols=287 Identities=16% Similarity=0.075 Sum_probs=183.2
Q ss_pred chHHHHHHHHHhhcCCC----ceE--EeCcHHHHHH-HHHHhc--------CC-----CCEEEecCCCCCcHHHHHhhhc
Q 016612 55 PTRDALESLLAKLDKAD----RAL--CFTSGMAALA-AVTHLL--------GT-----GEEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~----~~i--~~~~gt~al~-~~~~~~--------~~-----g~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
.+.+++++++++++|.+ +.+ ++++||+|.+ ++.+.. +. +..|++++..|.++. +.+
T Consensus 80 ~le~~~~~~la~llg~~~~~~~~~g~~TsGgTEAn~~al~~ar~~~~~~~~~~g~~~~~~~ii~s~~~H~sv~----ka~ 155 (431)
T TIGR01788 80 EIENRCVNMLADLWHAPAKDAEAVGTSTIGSSEAIMLGGLAMKWRWRKRMEAAGKPTDKPNLVMGSNVQVCWE----KFA 155 (431)
T ss_pred HHHHHHHHHHHHHhCCCCCCCCCeEEEechHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEEcCcchHHHH----HHH
Confidence 46788889999999876 233 3577788865 443321 11 237899999998886 445
Q ss_pred ccCCcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc------CCEEEEeCCCCCCC
Q 016612 115 PKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPV 182 (386)
Q Consensus 115 ~~~g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~------~~~li~D~a~~~~~ 182 (386)
+..|++++.++.+ |+++|++.++++|.+|+++..+|.+|.+.|+++|.++|+++ |+++++|.+|+.+.
T Consensus 156 ~~lg~~v~~i~~d~~~~~vd~~~L~~~i~~~t~lV~~t~g~t~tG~idpi~~I~~i~~~~~~~~~~~~~~HvDaaq~g~~ 235 (431)
T TIGR01788 156 RYFDVELREVPMDPGRYVIDPEQVVEAVDENTIGVVCILGTTYTGEYEDVKALNDALDEYNAKTGWDIPIHVDAASGGFI 235 (431)
T ss_pred HHcCceeEEEecCCCceeeCHHHHHHHHhhCCeEEEEEeCCCCCcccCCHHHHHHHHHHHHhhhCCCceEEEecccHHHH
Confidence 5567777766642 78999999999999999999999999999999999999999 99999999998433
Q ss_pred -------cc-CCCCCCccEEEeccccccccCCCceEEEEEEcChhH-HHHHH----Hhhhhc---CC-CC----ChhhHH
Q 016612 183 -------LS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELY----FLQNAE---GS-GL----APFDCW 241 (386)
Q Consensus 183 -------~~-~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~-~~~~~----~~~~~~---~~-~~----~~~~~~ 241 (386)
.. +....++|.+..|.|||+.+|.| +|+++++++.. ...+. .+.... +. .. .....|
T Consensus 236 ~p~~~~~~~~~~~~~~~DSis~s~HK~~~~P~g--~G~l~~r~~~~l~~~~~~~~~yl~~~~~~~t~~~sR~g~~al~~w 313 (431)
T TIGR01788 236 APFVYPDLEWDFRLPRVKSINVSGHKYGLVYPG--VGWVIWRDEEALPEELIFHVNYLGGDEPTFTLNFSRPANQVIAQY 313 (431)
T ss_pred HHHhCCCchhhcCCCCceEEEECchhccCCCCC--cEEEEEeChHHcchhheecccccCCCCCCcceecCchHHHHHHHH
Confidence 11 11234788999999999878888 79988886532 22111 110000 00 00 112223
Q ss_pred HHHhcC--CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC----HHhHHHH
Q 016612 242 ICLRGV--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS----LALSKHV 315 (386)
Q Consensus 242 ~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~----~~~~~~l 315 (386)
+.+..+ ..+....++..+.++.+.+.|++.+.+ +++.+. ...++++|.+.+ .....++
T Consensus 314 ~~l~~lG~~G~~~i~~~~~~la~~l~~~L~~~~~~--------------el~~~~--~~~~iV~Fr~~~~~~~~~~~~~l 377 (431)
T TIGR01788 314 YNFLRLGREGYRKIMQNSLDVARYLAEEIAKLGPF--------------EIISDG--SGIPLVAFKLKDDADPGYTLYDL 377 (431)
T ss_pred HHHHHhcHHHHHHHHHHHHHHHHHHHHHHHhCCCE--------------EEeeCC--CCceEEEEEeCCCCCCCcCHHHH
Confidence 333322 234444555556666666666655422 222110 145889998853 2235567
Q ss_pred HhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC-CCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 316 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL-TEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~-~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+.+...|+.+..-. .|. .+ +.-++|+++- .+.++++++.|.+++..+
T Consensus 378 ~~~L~~~G~~~~~~~------~p~---------------~~~~~~~lR~~~~~~~~~~~~~~~~~~~~~~~~~~ 430 (431)
T TIGR01788 378 SHRLRERGWIVPAYT------LPK---------------NAEDIVVMRIVVREGFSRDLAELLIEDIEAALAYL 430 (431)
T ss_pred HHHHHHCCCcccCCC------CCC---------------ccCCeEEEEEEecCCCCHHHHHHHHHHHHHHHHhh
Confidence 777777776422100 110 01 1234899884 477788888888777654
No 249
>cd01494 AAT_I Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent enzymes. PLP combines with an alpha-amino acid to form a compound called a Schiff base or aldimine intermediate, which depending on the reaction, is the substrate in four kinds of reactions (1) transamination (movement of amino groups), (2) racemization (redistribution of enantiomers), (3) decarboxylation (removing COOH groups), and (4) various side-chain reactions depending on the enzyme involved. Pyridoxal phosphate (PLP) dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalyzed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis
Probab=99.80 E-value=2e-18 Score=143.07 Aligned_cols=154 Identities=29% Similarity=0.331 Sum_probs=124.5
Q ss_pred HHHHHHHHHhhc--CCCceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCC-----
Q 016612 57 RDALESLLAKLD--KADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD----- 128 (386)
Q Consensus 57 ~~~l~~~l~~~~--g~~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d----- 128 (386)
+.++++.+++++ +.+..+++++|++|+.+ +.++.++|++|+++++.|++... ..++..|.+++.++.++
T Consensus 2 ~~~~~~~l~~~~~~~~~~~~~~~~~t~a~~~~~~~~~~~~~~v~~~~~~~~~~~~---~~~~~~g~~~~~v~~~~~~~~~ 78 (170)
T cd01494 2 LEELEEKLARLLQPGNDKAVFVPSGTGANEAALLALLGPGDEVIVDANGHGSRYW---VAAELAGAKPVPVPVDDAGYGG 78 (170)
T ss_pred HHHHHHHHHHHcCCCCCcEEEeCCcHHHHHHHHHHhCCCCCEEEEeecccceehh---hHHHhcCCEEEEeccCCCCccc
Confidence 467899999999 77788888888999875 45567789999999999988852 45567888998887641
Q ss_pred H--HHHHhhh-CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----CCCCCCccEEEeccccc
Q 016612 129 L--DEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----RPLELGADIVMHSATKF 201 (386)
Q Consensus 129 ~--~~l~~~~-~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----~~~~~~~di~~~S~sK~ 201 (386)
. +++++.. .++++++++++++|++|...|+++|.++|+++|+++|+|++++.+... +....++|+++.|++|+
T Consensus 79 ~~~~~~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~d~~~~s~~K~ 158 (170)
T cd01494 79 LDVAILEELKAKPNVALIVITPNTTSGGVLVPLKEIRKIAKEYGILLLVDAASAGGASPAPGVLIPEGGADVVTFSLHKN 158 (170)
T ss_pred hhhhhhhhccccCceEEEEEecCcCCCCeEcCHHHHHHHHHHcCCEEEEecccccccccccccccccccCCEEEEEcccc
Confidence 1 2444433 478999999999999999999999999999999999999999876654 24456799999999999
Q ss_pred cccCCCceEEEEEEc
Q 016612 202 IAGHSDVMAGVLAVK 216 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~ 216 (386)
+++ + ++|+++++
T Consensus 159 ~~~-~--~~G~l~~~ 170 (170)
T cd01494 159 LGG-E--GGGVVIVK 170 (170)
T ss_pred cCC-C--ceEEEEeC
Confidence 976 3 37998864
No 250
>PRK02769 histidine decarboxylase; Provisional
Probab=99.80 E-value=1.7e-17 Score=153.87 Aligned_cols=159 Identities=16% Similarity=0.194 Sum_probs=123.7
Q ss_pred hHHHHHHHHHhhcCCC--c--eEEeCcHHHHHH-HHHHh--cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC--
Q 016612 56 TRDALESLLAKLDKAD--R--ALCFTSGMAALA-AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~--~i~~~~gt~al~-~~~~~--~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-- 126 (386)
..+++.+++++++|.+ + .+++++||++.. ++... +.++++|++++..|.+...++ +..|++...++.
T Consensus 66 ~e~~~~~~~a~l~g~~~~~~~G~~TsGgTean~~a~~~ar~~~~~~~ii~s~~~H~Sv~ka~----~~lg~~~~~V~~~~ 141 (380)
T PRK02769 66 FERDVMNFFAELFKIPFNESWGYITNGGTEGNLYGCYLARELFPDGTLYYSKDTHYSVSKIA----RLLRIKSRVITSLP 141 (380)
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEecChHHHHHHHHHHHHHhCCCcEEEeCCCceehHHHHH----HHcCCCCceeccCC
Confidence 5667888899999875 3 367777888853 43332 467889999999999987554 334444444443
Q ss_pred ---CCHHHHHhhhCCC---ceEEEEeCCCCCCcccccHHHHHHHHHHcC---CEEEEeCCCCCCCcc-------CCCCCC
Q 016612 127 ---CDLDEVASAIGPW---TKLVWVESPTNPRQQICDIRKIAEMAHAHG---ALLLVDNSIMSPVLS-------RPLELG 190 (386)
Q Consensus 127 ---~d~~~l~~~~~~~---~~~v~~~~~~nptG~~~~l~~i~~la~~~~---~~li~D~a~~~~~~~-------~~~~~~ 190 (386)
.|+++|++.++++ |.+|+++.++|++|.+.|+++|.++|+++| +++++|.+++.+..+ -....+
T Consensus 142 ~g~id~~~L~~~i~~~~~~t~lvv~t~gtt~tG~idpi~~I~~i~~~~g~~~~~lHVDaA~gg~~~p~~~~~~~~d~~~~ 221 (380)
T PRK02769 142 NGEIDYDDLISKIKENKNQPPIIFANIGTTMTGAIDNIKEIQEILKKIGIDDYYIHADAALSGMILPFVNNPPPFSFADG 221 (380)
T ss_pred CCcCcHHHHHHHHHhCCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCCceEEEEEecccceeecccCccccCCccCC
Confidence 2899999998765 999999999999999999999999999998 699999999876653 111237
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~ 220 (386)
+|.++.|.||++++|.| +|+++.+++.+
T Consensus 222 vDsis~s~HK~~~~P~g--~G~l~~r~~~~ 249 (380)
T PRK02769 222 IDSIAISGHKFIGSPMP--CGIVLAKKKYV 249 (380)
T ss_pred CCEEEECCcccCCCCCC--cEEEEEehhhh
Confidence 99999999999987888 79998886543
No 251
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.80 E-value=1.6e-17 Score=167.84 Aligned_cols=158 Identities=18% Similarity=0.165 Sum_probs=129.8
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH----HHHH-HHHHhcCC-CC----EEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM----AALA-AVTHLLGT-GE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt----~al~-~~~~~~~~-g~----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
+..++++++++++|.+.+++..+++ .+++ ++.+++++ || +|+++...|++....|. ..|++++.++
T Consensus 569 ~~~~~r~~la~i~g~~~v~f~pnaga~ge~a~~~vi~~~~~~~Gd~~r~~vli~~~aH~sn~a~a~----~~G~~vv~v~ 644 (993)
T PLN02414 569 MFEDLGDLLCEITGFDSFSLQPNAGAAGEYAGLMVIRAYHLSRGDHHRNVCIIPVSAHGTNPASAA----MCGMKIVVVG 644 (993)
T ss_pred HHHHHHHHHHHHhCCCeEEEcCCCcHHHHHHHHHHHHHHHhccCCCCCCEEEeCCCcCccCHHHHH----HCCCEEEEec
Confidence 5788999999999997777776655 3444 55556755 88 89999999999875543 4799999998
Q ss_pred CC-----CHHHHHhhhC---CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC--ccCCCCCCccEEE
Q 016612 126 TC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVM 195 (386)
Q Consensus 126 ~~-----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~~di~~ 195 (386)
++ |+++|+++++ +++++|++++|+|.+|...|+++|.++||++|+++++|.++..+. +.++.+.|+|+++
T Consensus 645 ~d~~G~vDle~L~~~i~~~~~~ta~V~vt~pSn~gg~e~~I~eI~~iah~~Galv~vDgAq~~a~~~l~~p~~~GaD~~~ 724 (993)
T PLN02414 645 TDAKGNINIEELRKAAEAHKDNLAALMVTYPSTHGVYEEGIDEICDIIHDNGGQVYMDGANMNAQVGLTSPGFIGADVCH 724 (993)
T ss_pred cCCCCCcCHHHHHHHHhccCCCeEEEEEECCCccccccchHHHHHHHHHHcCCEEEEEecCHHhccCcCCccccCCCEEE
Confidence 74 8999999998 478999999999999999999999999999999999999997665 3356688999999
Q ss_pred eccccccccCCC---ceEEEEEEcC
Q 016612 196 HSATKFIAGHSD---VMAGVLAVKG 217 (386)
Q Consensus 196 ~S~sK~~~g~~g---~~~G~i~~~~ 217 (386)
+|.||+|++|.| --.|++++++
T Consensus 725 ~s~HK~f~~P~G~GGPg~G~l~~~~ 749 (993)
T PLN02414 725 LNLHKTFCIPHGGGGPGMGPIGVKK 749 (993)
T ss_pred ecCCccCCcCcccCCCCeeeEEEch
Confidence 999998874432 1268898874
No 252
>KOG0633 consensus Histidinol phosphate aminotransferase [Amino acid transport and metabolism]
Probab=99.80 E-value=1.2e-17 Score=138.86 Aligned_cols=264 Identities=18% Similarity=0.221 Sum_probs=175.7
Q ss_pred ceEEeCcHH-HHHHHHHH-hcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhC--CCce
Q 016612 72 RALCFTSGM-AALAAVTH-LLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG--PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt-~al~~~~~-~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~--~~~~ 141 (386)
+.+.++-|+ +.+.++++ .+.|| +++++-.|+|.-|. --+...+++++.++.. +.+.+.+.++ .+++
T Consensus 87 dnic~GvGsDE~ID~iiR~~c~PGkeKIl~cPPtysMY~----v~A~iNd~eVvkvpl~pdF~lnvdai~evl~~ds~iK 162 (375)
T KOG0633|consen 87 DNICVGVGSDELIDLIIRCVCDPGKEKILDCPPTYSMYV----VDAAINDAEVVKVPLNPDFSLNVDAIAEVLELDSKIK 162 (375)
T ss_pred cceEEecCcHHHHHHHHhheecCCccceeecCCcceeEE----EEeecCCceEEEecCCCCccccHHHHHHHHhccccce
Confidence 567778887 77876655 68999 88999999998773 4466788999998864 7888887775 5899
Q ss_pred EEEEeCCCCCCcccccHHHHHHHHHHc-CCEEEEeCCCCC--CC---ccCCCCCCccEEEeccccccccCCCceEEEEEE
Q 016612 142 LVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMS--PV---LSRPLELGADIVMHSATKFIAGHSDVMAGVLAV 215 (386)
Q Consensus 142 ~v~~~~~~nptG~~~~l~~i~~la~~~-~~~li~D~a~~~--~~---~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~ 215 (386)
++++++|.||||.....+.|.++.+.. +.++++||+|-. |. ..-..+..+-+++.++||.| |..|+|+|+-+.
T Consensus 163 ~~F~tSPgNPtg~~ik~~di~KiLe~p~nglVVvDEAYidFsg~~S~~~lV~kYpNLivlqTlSKsf-GLAGiRvG~~~~ 241 (375)
T KOG0633|consen 163 CIFLTSPGNPTGSIIKEDDILKILEMPDNGLVVVDEAYIDFSGVESRMKLVKKYPNLIVLQTLSKSF-GLAGIRVGYGAF 241 (375)
T ss_pred EEEEcCCCCCCcccccHHHHHHHHhCCCCcEEEEeeeeEeeccccccchHhHhCCceeehhhhhhhc-CcceeEeecccc
Confidence 999999999999999877777777654 789999999742 21 11122346679999999999 788999999998
Q ss_pred cChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhh
Q 016612 216 KGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 290 (386)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i 290 (386)
+ ..+.+.+...... -+++.+...+++.++. .+....+...+...++-..|...+ .+.++++
T Consensus 242 ~-~~ia~iln~~KaP--YNiS~~~s~~AL~Als~~n~kkme~~rdaiv~er~RL~keLt~v~--------~~~~~~g--- 307 (375)
T KOG0633|consen 242 P-LSIAEILNRAKAP--YNISVAGSVAALAALSDSNGKKMEDVRDAIVRERERLFKELTEVP--------FLNDYPG--- 307 (375)
T ss_pred c-HHHHHHHHhccCC--ccccchhHHHHHHhcCcccchHHHHHHHHHHHHHHHHHHHhhcCc--------cccCCCC---
Confidence 6 4455544333322 2334444444444433 333333344444444433333332 2333322
Q ss_pred hhhccCCCCceEEEEeC---CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-
Q 016612 291 HYSQAKGAGSVLSFLTG---SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG- 366 (386)
Q Consensus 291 ~~~~~~~~~~~~~~~~~---~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~- 366 (386)
...+.++.+.+. +....+...+-+...|+.+++.+..- ...|++||++|
T Consensus 308 -----g~daNFiLi~v~~~~n~~akkly~q~at~~gVvVRfrgse~----------------------~c~G~lRitvGt 360 (375)
T KOG0633|consen 308 -----GSDANFILIEVTGGDNGMAKKLYKQDATKMGVVVRFRGSEE----------------------GCKGYLRITVGT 360 (375)
T ss_pred -----cccccEEEEEEcCCCcHHHHHHHHHHHHhcceEEEEcCCcc----------------------ccceeEEEEcCC
Confidence 234677888773 33334444455566678777654311 13788999998
Q ss_pred cCChHHHHHHHHHHH
Q 016612 367 IEDVNDLISDLDKAL 381 (386)
Q Consensus 367 ~~~~~~~i~~l~~~l 381 (386)
.|+..-+++.+++.+
T Consensus 361 ~EentvL~k~~K~~l 375 (375)
T KOG0633|consen 361 PEENTVLMKCLKQFL 375 (375)
T ss_pred cccchHHHHHHHhhC
Confidence 588889999988764
No 253
>KOG1368 consensus Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=1e-17 Score=141.93 Aligned_cols=279 Identities=19% Similarity=0.257 Sum_probs=190.1
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHH-HHHHHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAA-LAAVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~a-l~~~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
|....+|+..++++|.+..++++|||.+ +.+++.- -+||.+|++.+..|--.... -.+....|+.++.+...
T Consensus 56 ~tt~rLE~~vA~l~GKEAgLFv~SGTmgNllaIm~Hc~~rg~eii~gd~~HI~~~E~-gg~s~l~gv~~~tv~~e~dgtm 134 (384)
T KOG1368|consen 56 PTTNRLEQRVAELFGKEAGLFVPSGTMGNLLAIMVHCHQRGSEIIVGDRAHIHRYEQ-GGISQLAGVHVRTVKNENDGTM 134 (384)
T ss_pred ccHHHHHHHHHHHhCccceeeecccccccHHHHHHHhcCCCceEEeccchheeehhc-cChhhhccceeEeeeeCCCCee
Confidence 6788999999999999999999999965 5577664 56999999988777332211 13445566666665532
Q ss_pred CHHHHHhhhC--------CCceEEEEeCCCCCCc-ccccH---HHHHHHHHHcCCEEEEeCCCCC------CCccCCCCC
Q 016612 128 DLDEVASAIG--------PWTKLVWVESPTNPRQ-QICDI---RKIAEMAHAHGALLLVDNSIMS------PVLSRPLEL 189 (386)
Q Consensus 128 d~~~l~~~~~--------~~~~~v~~~~~~nptG-~~~~l---~~i~~la~~~~~~li~D~a~~~------~~~~~~~~~ 189 (386)
|++++++++. +.|++|.+++.+|.+| .++|+ .+|.++|++||+.+++|++.-+ ++...-...
T Consensus 135 ~ledIe~~ir~~~GD~H~p~T~LIclENT~~~~Gg~vlPle~~~~v~~lak~~glkLH~DGARi~NAavasgV~vk~i~~ 214 (384)
T KOG1368|consen 135 DLEDIEAAIRVPKGDCHMPPTKLICLENTHNNCGGKVLPLEELDRVKALAKRHGLKLHMDGARIFNAAVASGVPVKKICS 214 (384)
T ss_pred eHHHHHHhhcCCCCCccCCCceEEEeeccccccCceEeeHHHHHHHHHHHhccCCeeecchhhhhhHHHHcCCCHHHHHH
Confidence 8999999886 3689999999988887 77785 5688899999999999999432 221111122
Q ss_pred CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCC--ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 016612 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEF 267 (386)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 267 (386)
..|-+...+||.++.|- +.+++++ +.+..+.+.+....|.++ +...+++++-++..-...+.+..+.++.+.++
T Consensus 215 ~fDSVsiCLSKglgAPV---GSViVG~-k~FI~kA~~~RKalGGGmRQsGvLaaaaLval~~~~~~L~~dHk~A~~lAe~ 290 (384)
T KOG1368|consen 215 AFDSVSICLSKGLGAPV---GSVIVGS-KDFIDKARHFRKALGGGMRQSGVLAAAALVALDENVPLLRADHKRAKELAEY 290 (384)
T ss_pred hhhhhhhhhhccCCCCc---ccEEEcc-HHHHHHHHHHHHHhcCchhHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHH
Confidence 45777777999997763 4666665 566666666655554443 34455555556655455667777888899999
Q ss_pred HhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe-CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCC
Q 016612 268 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT-GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 346 (386)
Q Consensus 268 l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~ 346 (386)
+++.+.+ ..-.+ ...+.|+.+.+ ...-..+.+.+.+.+.|+..-.|..+
T Consensus 291 ~~~~~~i-~v~v~---------------a~etNiv~~~l~q~~~~~~~l~~~~~k~gi~lm~~~s~-------------- 340 (384)
T KOG1368|consen 291 INTPEEI-RVEVP---------------AVETNIVNMVLCQARLTAEELCKFLEKNGILLMGGASR-------------- 340 (384)
T ss_pred hccccce-eeecc---------------hhhcceeeeecccccCCHHHHHHHHHHCCeEEeecccc--------------
Confidence 8865422 11111 12456667665 23345778888888888876555432
Q ss_pred CHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 016612 347 PVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
.+|+.+.+.-.++-++.+.+++
T Consensus 341 -------------r~Rivlh~Qvt~~~ve~~~~~~ 362 (384)
T KOG1368|consen 341 -------------RIRIVLHHQVTDEDVEYVKSVL 362 (384)
T ss_pred -------------ceEEEEEEecCHHHHHHHHHHH
Confidence 2899998766666666665555
No 254
>COG2008 GLY1 Threonine aldolase [Amino acid transport and metabolism]
Probab=99.79 E-value=5.2e-17 Score=142.78 Aligned_cols=232 Identities=22% Similarity=0.215 Sum_probs=157.8
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcc--cCCcEEEEeCC----C
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNT----C 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~--~~g~~~~~v~~----~ 127 (386)
|..+++++.+++++|....++++|||++.. ++.+.++||+.|++....|-..... ...+ ..+.++..++- .
T Consensus 35 ~~~~~~e~~~ae~~g~~a~~Fv~sGT~aN~lal~~~~~~~~~vi~~~~aHi~~~E~--Ga~~~~~~~~~~~~~~g~~Gkl 112 (342)
T COG2008 35 PTTNALEQRIAELFGKEAALFVPSGTQANQLALAAHCQPGESVICHETAHIYTDEC--GAPEFFGGGQKLPIVPGADGKL 112 (342)
T ss_pred HHHHHHHHHHHHHhCCceEEEecCccHHHHHHHHHhcCCCCeEEEeccccceeccc--CcHHHHcCCceeccCCCCCCCc
Confidence 689999999999999989999999998876 6777899999999998888544322 1111 12244444442 2
Q ss_pred CHHHHHhhhC------CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCC------CCCccCCCCCCcc
Q 016612 128 DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM------SPVLSRPLELGAD 192 (386)
Q Consensus 128 d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~------~~~~~~~~~~~~d 192 (386)
++++++..+. ..+.++++.+.+|..|.+++ +++|.++|+++|+.|++|++-- .+........++|
T Consensus 113 t~e~v~~~i~~~d~~~~~~~~~~~e~~~te~GtVy~l~el~~i~~~~k~~~l~LHmDGAR~~nA~valg~~~~~~~~~~D 192 (342)
T COG2008 113 TPEDVEAAIRPDDIHHAPTPLAVLENTATEGGTVYPLDELEAISAVCKEHGLPLHMDGARLANALVALGVALKTIKSYVD 192 (342)
T ss_pred CHHHHHHhhcCCCcccCCCceEEEeeccCCCceecCHHHHHHHHHHHHHhCCceeechHHHHHHHHHcCCCHHHHHhhCC
Confidence 8999998765 24556666666667899987 6788999999999999999942 1211112235899
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCCh--hhHHHHHhcCCcHHHHHHHHHHH--HHHHHHHH
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP--FDCWICLRGVKTMALRVEKQQDN--AQKIAEFL 268 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~l 268 (386)
++.+++||.++.| +|.++..+..+.+..+.++...|..++. +.++..+..++.-.++.....+| +++|.+.+
T Consensus 193 ~v~~~~tK~g~~~----~gAiv~gn~~~~~~a~~~rK~~Ggl~~k~r~laA~~~~~l~~~~~~~~~~Han~mA~~La~~~ 268 (342)
T COG2008 193 SVSFCLTKGGGAP----VGAIVFGNRDFAKRARRWRKRAGGLMRKARFLAAQGLYALEDDVWRLAADHANAMAARLAEGL 268 (342)
T ss_pred EEEEecccCCcce----eeeEEEcCHHHHHHHHHHHHHhcccHhhhhHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhh
Confidence 9999999998654 4555556677877787777666655444 33333344455444555566666 67777766
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 309 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (386)
+..+ |..+..+ ..++++.+.+++.
T Consensus 269 ~~~~--------------G~~~~~~---~~tN~vf~~l~~~ 292 (342)
T COG2008 269 EAKP--------------GVKLAFP---VETNMVFVRLPES 292 (342)
T ss_pred hhcC--------------CceeccC---CcccEEEEECChH
Confidence 6543 3333221 3567788888654
No 255
>PLN03032 serine decarboxylase; Provisional
Probab=99.78 E-value=9e-17 Score=147.89 Aligned_cols=209 Identities=18% Similarity=0.195 Sum_probs=147.8
Q ss_pred hHHHHHHHHHhhcCCC--ce--EEeCcHHHHHH-HHHHh--cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD--RA--LCFTSGMAALA-AVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~--i~~~~gt~al~-~~~~~--~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..+++.+++++++|.+ +. +++++||+|.. ++... ..++++|+++...|.+...+ ++..|+.++.++.+
T Consensus 67 ~e~~v~~~ia~llg~~~~~~~G~fTsGGTEaNl~al~~ar~~~~~~~vi~s~~~H~Sv~ka----a~~lg~~~~~V~~d~ 142 (374)
T PLN03032 67 FEVGVLDWFARLWELEKDEYWGYITTCGTEGNLHGILVGREVFPDGILYASRESHYSVFKA----ARMYRMEAVKVPTLP 142 (374)
T ss_pred HHHHHHHHHHHHhCCCCccCCEEEeCchHHHHHHHHHHHHHhCCCcEEEeCCCceeHHHHH----HHHcCCCCeEeeeCC
Confidence 6778889999999975 33 78888898864 44432 23556899999999998744 44455555555543
Q ss_pred ----CHHHHHhhhCC---CceEEEEeCCCCCCcccccHHHHHHHHHHcC-----CEEEEeCCCCCCCccC-------CCC
Q 016612 128 ----DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAEMAHAHG-----ALLLVDNSIMSPVLSR-------PLE 188 (386)
Q Consensus 128 ----d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~la~~~~-----~~li~D~a~~~~~~~~-------~~~ 188 (386)
|+++|++++.+ +|.+|+++..+|++|.+.|+++|+++|+++| +++++|.+++.+..+. ...
T Consensus 143 ~g~id~~~L~~~i~~~~~~~~lvv~tagtt~tG~idpi~eI~~i~~~~g~~~~~~~lHvDaA~gg~~~p~~~~~~~~~~~ 222 (374)
T PLN03032 143 SGEIDYDDLERALAKNRDKPAILNVNIGTTVKGAVDDLDRILRILKELGYTEDRFYIHCDGALFGLMMPFVSRAPEVTFR 222 (374)
T ss_pred CCcCcHHHHHHHHHHcCCCCEEEEEEecCcCCccCCCHHHHHHHHHHhCCCCCCeeEEEEccchhhhhhccCCCcccCCC
Confidence 89999999975 5778889999999999999999999999996 5899999998765431 112
Q ss_pred CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHH-hhh-------hcCC--CCChhhHHHHHh--cCCcHHHHHHH
Q 016612 189 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-LQN-------AEGS--GLAPFDCWICLR--GVKTMALRVEK 256 (386)
Q Consensus 189 ~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~-~~~-------~~~~--~~~~~~~~~~~~--~~~~~~~~~~~ 256 (386)
.++|.++.|+||+++.|.| +|+++.+++.+ +.+.. ..+ ..++ +......|+.+. +.+.+..+.++
T Consensus 223 ~~vDSis~s~HK~~g~P~g--~G~ll~r~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~~l~~w~~l~~~G~~g~~~~~~~ 299 (374)
T PLN03032 223 KPIGSVSVSGHKFLGCPMP--CGVALTRKKHV-KALSQNVEYLNSRDATIMGSRNGHAPLYLWYTLRRKGYRGIKRDVQH 299 (374)
T ss_pred cCCcEEEECcccccCCCcC--eEEEEEEchhh-HhhccCCcccCCCCCcccCCCchHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 3689999999999966887 79999886543 22211 110 1111 122344454443 44556667777
Q ss_pred HHHHHHHHHHHHhhC
Q 016612 257 QQDNAQKIAEFLASH 271 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (386)
..+.++.+.+.+++.
T Consensus 300 ~~~~a~~l~~~l~~~ 314 (374)
T PLN03032 300 CMRNAHYLKDRLTEA 314 (374)
T ss_pred HHHHHHHHHHHHHhC
Confidence 778888888888764
No 256
>PLN02624 ornithine-delta-aminotransferase
Probab=99.78 E-value=1.4e-17 Score=159.43 Aligned_cols=316 Identities=13% Similarity=0.131 Sum_probs=184.2
Q ss_pred CCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh---c---C----
Q 016612 22 PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL---L---G---- 91 (386)
Q Consensus 22 ~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~---~---~---- 91 (386)
.+|..+|.+.++......+ .........++...++++.++++++.+..++++||++|+.+.+.+ . +
T Consensus 88 ~~Gh~~p~v~~ai~~ql~~----~~~~~~~~~~~~~~~la~~L~~~~~~~~~~f~~SGseA~e~AlklAr~~~~~~~g~~ 163 (474)
T PLN02624 88 NQGHCHPKIIKALTEQAEK----LTLSSRAFYNDKFPEFAEYLTSMFGYDMVLPMNTGAEGVETAIKLARKWGYEKKGIP 163 (474)
T ss_pred cCCCCCHHHHHHHHHHHHh----cCCcccccCCHHHHHHHHHHHhhcCCCeEEEeCChHHHHHHHHHHHHHHHHhhcCCC
Confidence 3677777776643322211 111111123456778888899988888899999999988633321 1 1
Q ss_pred CCC-EEEecCCCCCcHHHHHhhhcc------cC---CcEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc-
Q 016612 92 TGE-EIVAGDDLYGGTDRLLSRVTP------KT---GVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD- 157 (386)
Q Consensus 92 ~g~-~Vlv~~~~~~~~~~~~~~~~~------~~---g~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~- 157 (386)
+++ .|+.....|++.......+.. .+ ...+..++..|++.+++.++ +++++|++++++|++|.+.|
T Consensus 164 ~~~~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~iaaiiiEpv~~~~G~v~p~ 243 (474)
T PLN02624 164 KNEAIIVSCCGCFHGRTLAAISMSCDNEATRGFGPLLPGHLKVDFGDLDALEKIFEEDGDRIAAFLFEPIQGEAGVVIPP 243 (474)
T ss_pred CCCcEEEEECCCcCCCCHHHhhcCCCccccccCCCCCCCceEeCCCCHHHHHHHHHhCCCCEEEEEECCccCCCCCcCCC
Confidence 133 466666666554211111110 00 01244566678999998885 57889999999999999987
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh
Q 016612 158 ---IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ 228 (386)
Q Consensus 158 ---l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~ 228 (386)
+++|.++|++||+++|+||+|.. +... +......|+++ ++|.+++ +++++|+++.+ +++.+.+....
T Consensus 244 ~~~L~~l~~lc~~~gillI~DEv~tG~GrtG~~~a~~~~~i~pDiv~--lsK~lgg-G~~pigav~~~-~~i~~~~~~~~ 319 (474)
T PLN02624 244 DGYLKAVRELCSKHNVLMIADEIQTGLARTGKMLACDWEEVRPDVVI--LGKALGG-GVIPVSAVLAD-KDVMLCIKPGE 319 (474)
T ss_pred HHHHHHHHHHHHHcCCEEEEeccccCcCcCcchhhHHhcCCCCCEEE--ecccccC-CCCcceeeeec-HHHHhHhccCC
Confidence 99999999999999999999862 2111 11223467776 5899964 44678999886 44544443222
Q ss_pred hhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC
Q 016612 229 NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 308 (386)
Q Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (386)
.....+.++....++...++.+.. ....++...+.+.+.+... . +...++.. ....++.|.++.+.++.
T Consensus 320 ~~~T~~g~pl~~aaa~aaLe~l~~--~~l~~~~~~~~~~l~~~L~--~-l~~~~~~~------i~~vrg~G~~~~i~l~~ 388 (474)
T PLN02624 320 HGSTFGGNPLASAVAMAALQVVQD--EKLAERSAKLGQELRDQLQ--K-IQKQFPKL------IKEVRGRGLLNAVVLNS 388 (474)
T ss_pred cCCCCCCCHHHHHHHHHHHHHHHh--chHHHHHHHHHHHHHHHHH--H-HHHhCCCc------eEEEEeeEEEEEEEecC
Confidence 222224555666655555543321 1222333333333322110 0 00011100 01124567788877743
Q ss_pred ----HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHH
Q 016612 309 ----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKA 380 (386)
Q Consensus 309 ----~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~ 380 (386)
......+.+.+..+|+.+.++. .+++||++. .++++++++.|+++
T Consensus 389 ~~~~~~~a~~~~~~L~e~GV~v~p~~---------------------------~~~lR~~p~l~~t~e~id~~l~~L~~~ 441 (474)
T PLN02624 389 PKLGPVSAYDVCLKLKERGLLAKPTH---------------------------DTIIRLAPPLSISEDELQECSKALSDV 441 (474)
T ss_pred CCcChHHHHHHHHHHHhCCeEEecCC---------------------------CCEEEEECCccCCHHHHHHHHHHHHHH
Confidence 2345677777877888654321 345999864 47888888888877
Q ss_pred Hhc
Q 016612 381 LRT 383 (386)
Q Consensus 381 l~~ 383 (386)
+++
T Consensus 442 l~~ 444 (474)
T PLN02624 442 LEH 444 (474)
T ss_pred HHH
Confidence 754
No 257
>TIGR03531 selenium_SpcS O-phosphoseryl-tRNA(Sec) selenium transferase. In the archaea and eukaryotes, the conversion of the mischarged serine to selenocysteine (Sec) on its tRNA is accomplished in two steps. This enzyme, O-phosphoseryl-tRNA(Sec) selenium transferase, acts second, after a phosphophorylation step catalyzed by a homolog of the bacterial SelA protein.
Probab=99.77 E-value=6.1e-17 Score=151.39 Aligned_cols=210 Identities=15% Similarity=0.133 Sum_probs=148.1
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHHHHHhcC----CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-
Q 016612 56 TRDALESLLAKLDKAD---RALCFTSGM-AALAAVTHLLG----TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~~~~~~~----~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~- 126 (386)
+.+++++.+++++|.+ ..+++++|| .++.+++..++ +||.|+++...|.++. +.+...|++++.++.
T Consensus 106 l~~~~e~~~~~~~G~~~~~~a~~v~~~Tg~al~laL~alr~~~~~gd~VI~p~~th~S~~----kAi~~~G~~pv~Vd~~ 181 (444)
T TIGR03531 106 LTNKLVKDFLKLLGLRSIKSAFVVPLATGMSLSLCLSALRHKRPKAKYVIWPRIDQKSCI----KAISTAGFEPRVIETV 181 (444)
T ss_pred HHHHHHHHHHHHcCCCCCCEEEEECCHHHHHHHHHHHHcCCcCCCCCEEEEECcChHHHH----HHHHHcCCeEEEeeee
Confidence 5677888899999998 688999999 67765444444 5899999999888775 566788899888884
Q ss_pred -------CCHHHHHhhhCC---CceEEEEeCCC-CCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc------CCCCC
Q 016612 127 -------CDLDEVASAIGP---WTKLVWVESPT-NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLEL 189 (386)
Q Consensus 127 -------~d~~~l~~~~~~---~~~~v~~~~~~-nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~------~~~~~ 189 (386)
.|++++++++++ +..++++.+|+ ++.|...|+++|.++|++||+++|+|++|+.+... .....
T Consensus 182 ~d~~~~~iD~e~Le~aIt~~~~kai~~Vv~Tp~t~~~g~~ddL~eIa~la~k~gI~lIvDaAyg~~~~~~~~~~~~g~~~ 261 (444)
T TIGR03531 182 LDGDELTTDVEDIERAIEEIGPDNILCVLSTTSCFAPRSPDDIEEIAKICANYDIPHIVNNAYGLQSNKYMELINKAIKV 261 (444)
T ss_pred ecCcCCCcCHHHHHHHHHhccCCCEEEEEEcCCcCCCcchhCHHHHHHHHHHcCCEEEEECcCcCcChhhhhhhhccccc
Confidence 189999999985 45666666554 45567789999999999999999999999864422 12223
Q ss_pred C-ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHH--HhcCCcHHHHHHHHHHHHHHHHH
Q 016612 190 G-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC--LRGVKTMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 190 ~-~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~ 266 (386)
| +|++++|+||++..|.+ +|+++++++++.+.+................++. ..+.+.+....++..++++.+.+
T Consensus 262 Grad~vv~s~hK~l~~pg~--Gg~I~~~d~el~~~i~~~y~g~~~~s~~~~~~~~ll~~G~~g~~~li~~~~~~a~~l~~ 339 (444)
T TIGR03531 262 GRVDAVVSSTDKNFMVPVG--GAIIYSFDENFIQEISKSYPGRASASPSLDVLITLLSLGSKGYLELLKERKEMYKYLKE 339 (444)
T ss_pred cCCCeEEEeCccCCCCCCC--EEEEEECCHHHHHHHHHhccCCCCChHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHH
Confidence 3 59999999999977655 7777787777776665432221111111222222 23445566666667777777777
Q ss_pred HHhhC
Q 016612 267 FLASH 271 (386)
Q Consensus 267 ~l~~~ 271 (386)
.|++.
T Consensus 340 ~L~~l 344 (444)
T TIGR03531 340 LLQKL 344 (444)
T ss_pred HHHHH
Confidence 77653
No 258
>PLN00144 acetylornithine transaminase
Probab=99.77 E-value=1.2e-17 Score=156.00 Aligned_cols=316 Identities=17% Similarity=0.162 Sum_probs=190.4
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh----cC---
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL----LG--- 91 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~----~~--- 91 (386)
...+|..+|++.++......+. .+ ++.. .++...++.+.+.+..+.+...+++||++|+.+.+.+ ..
T Consensus 26 ~~~lGh~~p~v~~ai~~q~~~~----~~-~~~~~~~~~~~~la~~l~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~ 100 (382)
T PLN00144 26 VNALGHGDPDWVKAVAEQAGTL----AH-VSNVYHTIPQVELAKRLVASSFADRVFFCNSGTEANEAAIKFARKYQRVRA 100 (382)
T ss_pred hccCCCCCHHHHHHHHHHHHhc----CC-ccccccCHHHHHHHHHHHhcCCCCeEEEeCCcHHHHHHHHHHHHHHHhccC
Confidence 4458888888776433222211 11 1111 2456677888888877667888899999998633221 11
Q ss_pred ---C------CCEEEecCCCCCcHHHHHhhhccc------C---CcEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCC
Q 016612 92 ---T------GEEIVAGDDLYGGTDRLLSRVTPK------T---GVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPR 152 (386)
Q Consensus 92 ---~------g~~Vlv~~~~~~~~~~~~~~~~~~------~---g~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~npt 152 (386)
+ ..+|+.-...|++.......+... + -..+..++..|++.+++.+. +++++|+++..+||.
T Consensus 101 ~~~~~~~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP~q~~g 180 (382)
T PLN00144 101 PDKKDPAASSATEFVSFSNSFHGRTLGALALTSKEQYRTPFEPLMPGVTFVEYGNLEAARKLIQKGKTAAVFVEPVQGEG 180 (382)
T ss_pred CCCccccccccceEEEECCCcccccHHHHhcCCCccccccCCCCCCCeEEeCCCCHHHHHHhcCCCCeEEEEEccccCCC
Confidence 0 246777777776653221111111 0 01245666778999998885 578899999889995
Q ss_pred cccc--c--HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHH
Q 016612 153 QQIC--D--IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (386)
Q Consensus 153 G~~~--~--l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~ 222 (386)
|... + +++|.++|++||+++|+||+++. +... .......| +.|++|.+++ |+++|+++++ +++.+
T Consensus 181 g~~~~~~~~~~~l~~l~~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~PD--i~t~sK~l~~--G~pig~v~~~-~~~~~ 255 (382)
T PLN00144 181 GIYPATKEFLQGLRALCDEAGALLVFDEVQCGLGRTGYLWAHEAYGVEPD--IMTLAKPLAG--GLPIGAVLVT-EKVAS 255 (382)
T ss_pred CCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchHhhhhhcCCCCC--EEEecccccC--CcceEEEEEc-HHHHh
Confidence 5543 2 89999999999999999999762 1111 12234567 4567999953 5899999997 45655
Q ss_pred HHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceE
Q 016612 223 ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 302 (386)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 302 (386)
.+.........+.++..+.++...++.+. .....++++.+.+.+.+.- ...+..++.. ...++.|.++
T Consensus 256 ~~~~~~~~~T~~~~pl~~aaa~a~l~~i~--~~~~~~~~~~~g~~l~~~l------~~~~~~~~~~----~~vrg~G~~~ 323 (382)
T PLN00144 256 AINPGDHGSTFAGGPLVCNAALAVLDKIS--KPGFLASVAKKGEYLRELL------RRKLGGNPHV----KEVRGVGLLV 323 (382)
T ss_pred ccCCCCCCCCCCCCHHHHHHHHHHHHHHh--hchHHHHHHHHHHHHHHHH------HHHHhhCCCc----eeeecCceEE
Confidence 44332333344566666666654444332 1334455555555443210 0011111111 1124578889
Q ss_pred EEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHH
Q 016612 303 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLD 378 (386)
Q Consensus 303 ~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~ 378 (386)
++.++. ....+.+.+...|+.+.++.. .+.||++++. +++++.++.|.
T Consensus 324 ~l~l~~--~~~~~~~~~~~~Gv~i~~~~~--------------------------~~~lrl~p~~~~~~~~i~~~~~~l~ 375 (382)
T PLN00144 324 GIQLDV--PAGPLVDACRDSGLLVLTAGK--------------------------GDVVRLVPPLVISEAELEQAVEILA 375 (382)
T ss_pred EEEecC--ccHHHHHHHHHCCeEEeecCC--------------------------CCEEEEeCCCccCHHHHHHHHHHHH
Confidence 998832 245677777778886654321 2459999864 77888888888
Q ss_pred HHHhcCC
Q 016612 379 KALRTGP 385 (386)
Q Consensus 379 ~~l~~~~ 385 (386)
++|.+.+
T Consensus 376 ~~l~~~~ 382 (382)
T PLN00144 376 DCLPALD 382 (382)
T ss_pred HHHHhcC
Confidence 8887653
No 259
>KOG1360 consensus 5-aminolevulinate synthase [Coenzyme transport and metabolism]
Probab=99.77 E-value=2.6e-17 Score=144.60 Aligned_cols=319 Identities=18% Similarity=0.240 Sum_probs=207.0
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCC-CCCccccCC--CCc-hHHHHHHHHHhhcCCCceEEeCcHHHHHH-H
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATE-NGPYDYTRS--GNP-TRDALESLLAKLDKADRALCFTSGMAALA-A 85 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~y~~~--g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~ 85 (386)
.+.-..+ +|||+|+..-|...... +..+.. ..+-+=.+. |.. ....+|+.|+++.+.+..++++|+.-|.. .
T Consensus 171 k~VtVWC-SNDYLgms~Hp~V~~A~--~~tl~~hG~GAGGTRNIsG~s~~hv~LE~eLA~LHqK~aALlFsSCfVANDst 247 (570)
T KOG1360|consen 171 KKVTVWC-SNDYLGMSRHPEVLDAM--HDTLDRHGAGAGGTRNISGHSKHHVRLEAELADLHQKEAALLFSSCFVANDST 247 (570)
T ss_pred CceEEEe-cCccccccCChHHHHHH--HHHHHHcCCCcCCccccCCCCchhhhHHHHHHHHhcCcceeeeeeeeeccchH
Confidence 3344456 79999987655433111 111111 111222233 654 67889999999999999999999975542 2
Q ss_pred H--HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC----CCceEEEEeCCCCCCcccccHH
Q 016612 86 V--THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG----PWTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 86 ~--~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~l~ 159 (386)
+ ++-.-||=+++.....|.+.. .-.+..+++-..+..+|+++|++++. ..+|+|.++.++.++|.+.|++
T Consensus 248 LftLak~lpgcei~SD~gNHASMI----~GIrns~v~K~IFrHND~~hL~~lL~~~~~svPKivAFEtVhSM~Gavcple 323 (570)
T KOG1360|consen 248 LFTLAKKLPGCEIFSDEGNHASMI----QGIRNSRVPKHIFRHNDLDHLEQLLQSSPKSVPKIVAFETVHSMDGAVCPLE 323 (570)
T ss_pred HHHHHHHCCCcEEeccccchHHHH----HHhhhcCCcceeeccCCHHHHHHHHHhCCCCCCceEEEeeeeccCCCcCCHH
Confidence 2 223346766777667776654 33446667666677789999998886 4678999999999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCccCC---------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPVLSRP---------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA 230 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~~~~~---------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~ 230 (386)
+|.+++++||.+.++||+++.|.+..- .....||+.+++.|.|+. .+|++... ..+.+.++.....
T Consensus 324 elcDvah~yGAiTFlDEVHAVGlYG~rGaGvgerdGvm~kvDiIsGTLgKafGc----VGGYIAat-~~LvDmiRSyAaG 398 (570)
T KOG1360|consen 324 ELCDVAHKYGAITFLDEVHAVGLYGPRGAGVGERDGVMHKVDIISGTLGKAFGC----VGGYIAAT-RKLVDMIRSYAAG 398 (570)
T ss_pred HHHHHHHHhCceeeeehhhhhccccCCCCCccccCCcchhhhhcccchhhhccc----ccceehhh-hhHHHHHHHhcCc
Confidence 999999999999999999987665421 112469999999999954 36899876 5677777765543
Q ss_pred c--CCCCChhhHHHHHhcCC---cH--HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEE
Q 016612 231 E--GSGLAPFDCWICLRGVK---TM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 303 (386)
Q Consensus 231 ~--~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 303 (386)
+ .+.+++....-++.+.+ .. ...+++.+++.+.+++.|.+. +++.++ ..+.++.
T Consensus 399 FIFTTSLPP~vl~GAleaVr~lk~~eg~~lR~~hqrnv~~~kq~l~~~---------GiPVi~----------~pSHIiP 459 (570)
T KOG1360|consen 399 FIFTTSLPPMVLAGALEAVRILKSEEGRVLRRQHQRNVKYVKQLLMEL---------GIPVIP----------NPSHIIP 459 (570)
T ss_pred eEEecCCChHHHHhHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHc---------CCcccC----------CCcceee
Confidence 3 34455533322222221 11 223456777888888888765 344332 2457788
Q ss_pred EEeCCHHhHHHHHhhc----CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHH
Q 016612 304 FLTGSLALSKHVVETT----KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDK 379 (386)
Q Consensus 304 ~~~~~~~~~~~l~~~l----~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~ 379 (386)
+.+.+.....++.+.| .++.-.+++ |.. ..+...+||..+..++.+..+.|-+
T Consensus 460 v~vgda~l~~~~sd~Li~~h~iYvQaINy---------PTV--------------~rG~E~LRiaPTP~HT~~mm~~lv~ 516 (570)
T KOG1360|consen 460 VRVGDAALAKQASDILISKHNIYVQAINY---------PTV--------------ARGTERLRIAPTPHHTPQMMNILVN 516 (570)
T ss_pred eeccCHHHHHHHHHHHHHhcCeEEEeccC---------Ccc--------------cccceeeecCCCCCCCHHHHHHHHH
Confidence 8887766666655544 332222332 211 1245679999988777777777766
Q ss_pred HHhc
Q 016612 380 ALRT 383 (386)
Q Consensus 380 ~l~~ 383 (386)
+|..
T Consensus 517 ~l~~ 520 (570)
T KOG1360|consen 517 ALLD 520 (570)
T ss_pred HHHH
Confidence 6543
No 260
>TIGR01364 serC_1 phosphoserine aminotransferase. This model represents the common form of the phosphoserine aminotransferase SerC. The phosphoserine aminotransferase of the archaeon Methanosarcina barkeri and putative phosphoserine aminotransferase of Mycobacterium tuberculosis are represented by separate models. All are members of the class V aminotransferases (pfam00266).
Probab=99.77 E-value=3.5e-17 Score=150.66 Aligned_cols=274 Identities=17% Similarity=0.109 Sum_probs=168.1
Q ss_pred chHHHHHHHHHhhcCC-C--ceEEeCc-HHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC---
Q 016612 55 PTRDALESLLAKLDKA-D--RALCFTS-GMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--- 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~-~--~~i~~~~-gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--- 126 (386)
...+++++.++++++. + +.+++++ ||.|+.+ +..++.+||++++...+..+. -|..+++..|+ +..+..
T Consensus 37 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgT~a~ea~~~nl~~~~~~~l~i~~G~fg~--r~~~~a~~~g~-~~~~~~~~~ 113 (349)
T TIGR01364 37 AVANEAESDLRELLNIPDNYEVLFLQGGATGQFAAVPLNLLAEGKVADYIVTGAWSK--KAAKEAKKYGV-VNVVASGKE 113 (349)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHH--HHHHHHHHhCC-cEEEecccc
Confidence 3678889999999985 3 3555544 7899985 566788999988766555443 34588888888 544441
Q ss_pred ------CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEecccc
Q 016612 127 ------CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATK 200 (386)
Q Consensus 127 ------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK 200 (386)
.++++++ +++++++|.+++..|.||...+ ++++.+++++++|.+++.|+.+-..+ +.|++++|.+|
T Consensus 114 ~~~~~~~~~~~~~--~~~~~~~v~~th~ETstGv~~~-----~l~~~~~~l~iVDavss~g~~~id~~-~~d~~~~ssqK 185 (349)
T TIGR01364 114 GNYTKIPDPSTWE--ISEDAAYVHYCANETIHGVEFR-----ELPDVKNAPLVADMSSNILSRPIDVS-KFGLIYAGAQK 185 (349)
T ss_pred CCCCCCCCHHhcC--CCCCCCEEEEcCCCCcccEecc-----eecccCCCeEEEEccccccCccCCHH-HccEEEEeccc
Confidence 2444444 3468999999999999999877 66777899999999999888652222 24599999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHh-------h----hhcCCCCChh-hHHHHHhcCC------cHHHHHHHHHHHHH
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFL-------Q----NAEGSGLAPF-DCWICLRGVK------TMALRVEKQQDNAQ 262 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~-------~----~~~~~~~~~~-~~~~~~~~~~------~~~~~~~~~~~~~~ 262 (386)
++ ||+| .|+++.+++.+.+ +... . .....+.++. ..+.+..+++ .+..+.++..+..+
T Consensus 186 ~l-gP~G--lg~l~~s~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~al~~al~~l~~~gG~e~i~~r~~~l~~ 261 (349)
T TIGR01364 186 NI-GPAG--LTVVIVRKDLLGR-ASRITPSMLNYKIHAENDSMYNTPPTFAIYVSGLVFKWLKEQGGVKAIEKRNQAKAQ 261 (349)
T ss_pred cc-CCCc--eEEEEECHHHHhh-cccCCCCcchHHHHHhcCCCCCCCcHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 99 5888 6999998654432 2110 0 0111112222 2222222222 24444455555666
Q ss_pred HHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC-ceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 263 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 263 ~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
.+.+.+++.+. +.... ..+..++ .+++|.+++.....+++..+...|+....|..
T Consensus 262 ~l~~~l~~~~g---l~~~~-----------~~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~---------- 317 (349)
T TIGR01364 262 LLYDTIDNSNG---FYRNP-----------VDPRNRSRMNVVFTLGNEELEKRFLKEAEERGLVSLKGHR---------- 317 (349)
T ss_pred HHHHHHHhCCC---eeccC-----------CCHHHcCCeEEEEecCChhHhHHHHHHHHHCCCcccCCcc----------
Confidence 66666665531 11110 0011123 56888876543335665666667774444332
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 342 SHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
..+.||+|+.. ++++.+++.|++.++
T Consensus 318 ---------------~~g~vRvS~~~~nt~edid~l~~al~~~~~ 347 (349)
T TIGR01364 318 ---------------SVGGMRASIYNAMPLEGVQALVDFMKEFQK 347 (349)
T ss_pred ---------------ccCeeEEECcCCCCHHHHHHHHHHHHHHHH
Confidence 13469999975 555555555555444
No 261
>cd00611 PSAT_like Phosphoserine aminotransferase (PSAT) family. This family belongs to pyridoxal phosphate (PLP)-dependent aspartate aminotransferase superfamily (fold I). The major group in this CD corresponds to phosphoserine aminotransferase (PSAT). PSAT is active as a dimer and catalyzes the conversion of phosphohydroxypyruvate to phosphoserine.
Probab=99.76 E-value=2.7e-17 Score=152.47 Aligned_cols=274 Identities=18% Similarity=0.153 Sum_probs=160.5
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEeCc-HHHHHHH-HHHhcC---CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 55 PTRDALESLLAKLDKAD--R-ALCFTS-GMAALAA-VTHLLG---TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~-gt~al~~-~~~~~~---~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
...+++++.+++++|.+ + .+++++ ||+++++ +..++. +||+|++ ..+...+..+++..|++++.++.
T Consensus 44 ~~~~~~r~~l~~l~~~~~~~~vvf~~gs~T~a~~~~~~~l~~~~~~~~~i~~-----g~~~~~~~~~a~~~g~~~~~~~~ 118 (355)
T cd00611 44 AIVNEAESDLRELLNIPDNYKVLFLQGGATGQFAAVPLNLLGDKGTADYVVT-----GAWSAKAAKEAKRYGGVVVIVAA 118 (355)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhcCCCCCeEEEEEC-----CHHHHHHHHHHHhcCCCcEEEec
Confidence 35788899999999963 3 445545 7799985 455666 5555544 22222233567788988888775
Q ss_pred C------C-HHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecc
Q 016612 127 C------D-LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (386)
Q Consensus 127 ~------d-~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~ 198 (386)
+ + ++..+..+++++++|.+++.+|.||...+ ++++.+|+++++|.+++.|+.+ +..+ .++++.|.
T Consensus 119 ~~~g~~~~~~~~~~~~~~~~~~lV~~~h~~t~tG~~~~-----~i~~~~g~~~~VDa~qs~g~~~idv~~--~~~~~ss~ 191 (355)
T cd00611 119 KEEGKYTKIPDVETWDLAPDAAYVHYCSNETIHGVEFD-----EVPDTGGVPLVADMSSNILSRPIDVSK--FGVIYAGA 191 (355)
T ss_pred ccccCCCCCCCHhhcCCCCCCCEEEEeCCcccccEEcc-----eecccCCCeEEEEccccccCCCCCHHH--hCEEEeec
Confidence 3 3 33333456689999999999999999843 4455699999999999998875 2223 34666779
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHh-----------hhhcCCCCCh-hhHHHHHhcCCc------HHHHHHHHHHH
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFL-----------QNAEGSGLAP-FDCWICLRGVKT------MALRVEKQQDN 260 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~ 260 (386)
+|++ ||+| .|+++++++.+.+ +... ......+.++ ...+.+..+++. +..+.++..+.
T Consensus 192 ~K~l-GP~G--~g~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Tpn~~~i~~L~aal~~l~~~gg~e~i~~~~~~l 267 (355)
T cd00611 192 QKNL-GPAG--VTVVIVRKDLLGK-ARKITPSMLNYKTHADNNSLYNTPPTFAIYMMGLVLKWLKEQGGVEAMEKRNRQK 267 (355)
T ss_pred cccc-CCCc--eEEEEECHHHHhh-cccCCCCcccHHHHHhcCCCCCCChHHHHHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 9988 6888 6999998654432 2211 0000012222 222332333332 33333444455
Q ss_pred HHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC-ceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 261 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 261 ~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
++.+.+.+++.+. ++... .++..+. .+++|.+++.....++++.+...|+....|..
T Consensus 268 ~~~l~~~l~~~~g----l~~~~----------~~~~~rs~~vvsf~~~~~~l~~~~~~~~~r~G~~~~~~~~-------- 325 (355)
T cd00611 268 AQLLYDTIDNSNG----FYRGP----------VDKRARSRMNVPFRLGKEELEKEFLKEAEAAGMIGLKGHR-------- 325 (355)
T ss_pred HHHHHHHHHhCcc----ccccC----------CCHHHcCceEEEEEcCChhhhHHHHHHHHHCCCcccCCCc--------
Confidence 5555555555431 00000 0111133 56889886642223444444445664322221
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
..+.||+|++..++.+.++.|.++|++
T Consensus 326 -----------------~~g~vR~S~~~~nt~edi~~l~~al~~ 352 (355)
T cd00611 326 -----------------SVGGIRASIYNALSLEGVQALADFMKE 352 (355)
T ss_pred -----------------ccCeEEEEccCCCCHHHHHHHHHHHHH
Confidence 135699999887777777777777664
No 262
>PLN02271 serine hydroxymethyltransferase
Probab=99.76 E-value=1e-15 Score=143.88 Aligned_cols=214 Identities=19% Similarity=0.234 Sum_probs=143.5
Q ss_pred CCchHHHH----HHHHHhhcCCCc-----eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHh-----hhcccC
Q 016612 53 GNPTRDAL----ESLLAKLDKADR-----ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS-----RVTPKT 117 (386)
Q Consensus 53 g~~~~~~l----~~~l~~~~g~~~-----~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~-----~~~~~~ 117 (386)
|.....++ .++..++||.+. .+-.-||+.|.. ++.++++|||+|+..+..|+++..+.. ..+...
T Consensus 188 G~~~iD~iE~la~era~~lF~~~~~~~gaNVQp~SGs~AN~aV~~ALl~PGD~IL~ldl~~GGHlshg~~~~~g~~vs~s 267 (586)
T PLN02271 188 GNQYIDQIERLCCERALAAFGLDSEKWGVNVQPYSCTSANFAVYTGLLLPGDRIMGLDSPSGGHMSHGYYTPGGKKVSGA 267 (586)
T ss_pred CChhHHHHHHHHHHHHHHHhCCcccccccceeeccHHHHHHHHHHHhcCCCCEEEEecCCCCCchhcccccccccccccc
Confidence 44444444 355667788652 355568997765 667899999999999888887754321 122445
Q ss_pred CcEEEEeC--C------CCHHHHHh-hhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 118 GVVVKRVN--T------CDLDEVAS-AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 118 g~~~~~v~--~------~d~~~l~~-~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
|..+..++ . .|.+++++ +...++++|++.+..+| ...|+++|.++|+++|+++++|.+|..|.+.
T Consensus 268 G~~~~~vpY~~d~~~g~IDyd~lek~a~~~rPKLII~g~Sayp--r~~D~~~i~eIAdevGA~LmvD~AH~aGLIa~g~~ 345 (586)
T PLN02271 268 SIFFESLPYKVNPQTGYIDYDKLEEKALDFRPKILICGGSSYP--REWDYARFRQIADKCGAVLMCDMAHISGLVAAKEC 345 (586)
T ss_pred cceEEEEEcccccccCccCHHHHHHHhhhcCCeEEEECchhcc--CcCCHHHHHHHHHHcCCEEEEECcccccccccCcC
Confidence 65544443 2 28899998 55689999999888887 7789999999999999999999999877652
Q ss_pred -CCCCCCccEEEeccccccccCCCceEEEEEEcCh-------------------hHHHHHHHhhhh---cCCCCChhhHH
Q 016612 185 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE-------------------RLAKELYFLQNA---EGSGLAPFDCW 241 (386)
Q Consensus 185 -~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~-------------------~~~~~~~~~~~~---~~~~~~~~~~~ 241 (386)
++.. ++|++++|+|||+.||. +|+++++++ ++.+++.....- .+.......+.
T Consensus 346 ~sP~~-~aDvvt~TTHKtLrGPr---GG~I~~r~~~~~~~~g~~gs~s~~~~~~d~~~kI~~aVfPglqgGphn~~IAal 421 (586)
T PLN02271 346 VNPFD-YCDIVTSTTHKSLRGPR---GGIIFYRKGPKLRKQGMLLSHGDDNSHYDFEEKINFAVFPSLQGGPHNNHIAAL 421 (586)
T ss_pred CCCCc-CCcEEEeCCcccCCCCC---ceEEEecccccccccCCccccccccccHHHHHHhhcccCCccccChhHHHHHHH
Confidence 3444 69999999999999886 477777642 122222221111 11111111111
Q ss_pred H-HHh--cCCcHHHHHHHHHHHHHHHHHHHhhCC
Q 016612 242 I-CLR--GVKTMALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 242 ~-~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
+ .+. ....+..+..+..+|++.|.+.|.++.
T Consensus 422 Avalkea~~~efk~Ya~QVv~NAkaLA~~L~~~G 455 (586)
T PLN02271 422 AIALKQVATPEYKAYMQQVKKNAQALASALLRRK 455 (586)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHCC
Confidence 1 011 223456778888999999999998764
No 263
>TIGR01885 Orn_aminotrans ornithine aminotransferase. This model describes the final step in the biosynthesis of ornithine from glutamate via the non-acetylated pathway. Ornithine amino transferase takes L-glutamate 5-semialdehyde and makes it into ornithine, which is used in the urea cycle, as well as in the biosynthesis of arginine. This model includes low-GC bacteria and eukaryotic species. The genes from two species are annotated as putative acetylornithine aminotransferases - one from Porphyromonas gingivalis, and the other from Staphylococcus aureus. After homology searching using BLAST it was determined that these two sequences were most closely related to ornithine aminotransferases. This model's seed includes one characterized hit, from Bacillus subtilis.
Probab=99.75 E-value=5.3e-16 Score=146.59 Aligned_cols=283 Identities=17% Similarity=0.248 Sum_probs=173.1
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhc----------CC-CCEEEecCCCCCc-HHHHHhhhcc-----
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHLL----------GT-GEEIVAGDDLYGG-TDRLLSRVTP----- 115 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~----------~~-g~~Vlv~~~~~~~-~~~~~~~~~~----- 115 (386)
..+...++++.+++++|.+..++++||++|+..++.+. .+ .+.|+..+..|++ +...+ ....
T Consensus 77 ~~~~~~~l~~~l~~~~~~~~~~~~~SGs~A~e~ai~~a~~~~~~~~~~~~~~~~i~~~~~~yhg~~~~~~-~~~~~~~~~ 155 (401)
T TIGR01885 77 YNDVFGEFAEYVTKLFGYDKVLPMNTGAEAVETAIKLARKWGYKVKGIPENQAIIVSAKGNFHGRTLGAI-SMSTDPDSR 155 (401)
T ss_pred CCHHHHHHHHHHHhhcCCCEEEEeCccHHHHHHHHHHHHHHhhhhcCCCCCCCEEEEECCCcCcccHHHH-hCcCCcccc
Confidence 34578889999999999888999999999876433321 12 4566667777665 33322 1111
Q ss_pred -cCC---cEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCc
Q 016612 116 -KTG---VVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVL 183 (386)
Q Consensus 116 -~~g---~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~ 183 (386)
.++ ..+..++..|++++++.++ +++.+|+++.+++++|.+.+ +++|.++|++||+++|+||++.. +..
T Consensus 156 ~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~avi~E~v~~~~G~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~g~~ 235 (401)
T TIGR01885 156 TNFGPYVPGFKKIPYNNLEALEEALEDHGPNVCAFIVEPIQGEAGVVVPDDGYLKKVRELCTKHNVLLIADEIQTGLGRT 235 (401)
T ss_pred cccCCCCCCceEeCCCCHHHHHHHHHhcCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcc
Confidence 112 2345566778999998875 56789999999999999986 99999999999999999999742 211
Q ss_pred c-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHH
Q 016612 184 S-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQ 258 (386)
Q Consensus 184 ~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (386)
. .......|+++ ++|.+++ ++.++|+++++ +++.+.+.........+.++..+.++...++.+.. +...
T Consensus 236 G~~~~~~~~~~~~di~~--~gK~l~~-g~~~ig~v~~~-~~i~~~~~~~~~~~t~~~~p~~~~aa~a~L~~i~~--~~l~ 309 (401)
T TIGR01885 236 GKLLCVDHENVKPDIVL--LGKALSG-GVYPVSAVLAD-DDVMLTIKPGEHGSTYGGNPLACAVAVAALEVLEE--EKLA 309 (401)
T ss_pred chhhHHhhcCCCCCEEE--eeccccC-CCCCcEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHH
Confidence 1 11223567775 5799964 44678999886 55655443211211223345555555555543322 1222
Q ss_pred HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH---HhHHHHHhhcCcceeccCCCCccccc
Q 016612 259 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---ALSKHVVETTKYFSITVSFGSVKSLI 335 (386)
Q Consensus 259 ~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---~~~~~l~~~l~~~gi~~~~G~~~~~~ 335 (386)
++.+.+.+++.+. |.++. ..+. ...++.|.++.+.+++. ....++.+.+..+|+.+.++
T Consensus 310 ~~~~~~~~~~~~~----------L~~l~-~~~~-~~~~g~g~~~~i~~~~~~~~~~~~~l~~~l~~~Gv~v~~~------ 371 (401)
T TIGR01885 310 ENAEKLGEIFRDQ----------LKKLP-KPII-TEVRGRGLLNAIVIDESKTGRTAWDLCLKLKEKGLLAKPT------ 371 (401)
T ss_pred HHHHHHHHHHHHH----------HHhcc-CCce-eEEeecCeeEEEEeccCcchhHHHHHHHHHHhCCEEEEec------
Confidence 3333333333321 11100 0010 11245678888777543 24677888888788865432
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 381 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 381 (386)
.++.+|+++.. ++++++++.|+++|
T Consensus 372 ---------------------~~~~lRi~p~l~~t~~~i~~~l~~l~~~l 400 (401)
T TIGR01885 372 ---------------------HGNIIRLAPPLVITEEQLDEGLEIIKKVI 400 (401)
T ss_pred ---------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHh
Confidence 13459999753 66666666666654
No 264
>PRK03715 argD acetylornithine transaminase protein; Provisional
Probab=99.75 E-value=1.8e-16 Score=148.56 Aligned_cols=321 Identities=17% Similarity=0.188 Sum_probs=183.8
Q ss_pred eeeccCC--CCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh
Q 016612 12 LLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL 89 (386)
Q Consensus 12 ~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~ 89 (386)
+.+++.. ++.++|..+|.+.++....... ....+....++...++.+.+.+..+.+..++++||++|+..++.+
T Consensus 37 ~~lD~~sg~~~~~lGh~~p~v~~a~~~q~~~----~~~~~~~~~~~~~~~la~~l~~~~~~~~v~f~~SGseA~e~Aik~ 112 (395)
T PRK03715 37 RYLDFIQGWAVNCLGHCNPGMVEALAAQAEK----LINPSPAFYNEPMAKLAGLLTQHSCFDKVFFANSGAEANEGAIKL 112 (395)
T ss_pred EEEECCcChhhccCCCCCHHHHHHHHHHHHh----cccccccccCHHHHHHHHHHhhccCCCEEEEeCCcHHHHHHHHHH
Confidence 4555543 3788998887766643222111 111111112345667777777766667889999999998644332
Q ss_pred c-------CCC-CEEEecCCCCCcH-HHHHhhhcccCC---------cEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 90 L-------GTG-EEIVAGDDLYGGT-DRLLSRVTPKTG---------VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 90 ~-------~~g-~~Vlv~~~~~~~~-~~~~~~~~~~~g---------~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
. ++| ++|++.+..|++. ...+ ....... ..+..++..|++++++.+.+++++|+++..++.
T Consensus 113 ar~~~~~~~~~r~~ii~~~~~yHG~t~~~~-~~s~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~aavi~Epv~~~ 191 (395)
T PRK03715 113 ARKWGRKHKNGAYEIITFDHSFHGRTLATM-SASGKPGWDTIFAPQVPGFPKAELNDIASVEKLITDKTVAVMLEPVQGE 191 (395)
T ss_pred HHHHhhccCCCCcEEEEECCCcCCChHHHH-hhcCCcccccCCCCCCCCceeeCCchHHHHHHHcCCCceEEEEeCCcCC
Confidence 2 123 5677777666554 3222 1111110 112333446899999999888999999999998
Q ss_pred Cccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHH
Q 016612 152 RQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA 221 (386)
Q Consensus 152 tG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~ 221 (386)
.|.+.| +++|.++|++||+++|+||+++. |-.. ......+|++ +++|.+++ |+.+|.++++++ +.
T Consensus 192 gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~tG~GRtG~~~a~~~~gv~PDi~--t~gK~lg~--G~p~~av~~~~~-i~ 266 (395)
T PRK03715 192 GGVIPATREFMQQLRALTKQHGLLLIVDEVQTGCGRTGTLFAYELSGIEPDIM--TLGKGIGG--GVPLAALLAKAE-VA 266 (395)
T ss_pred CCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCcchhhHhhcCCCCcee--eehhhhhC--CcceEEEEEccc-cc
Confidence 888876 99999999999999999999862 1111 1123356876 46899975 355777777644 43
Q ss_pred HHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCce
Q 016612 222 KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV 301 (386)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~ 301 (386)
. +..-......+.++...++.+..++.+.. +...++.+.+.+++.+.-. ++. ... ++ ...++.|.+
T Consensus 267 ~-~~~~~~~~T~~g~pl~~aaala~L~~l~~--~~l~~~~~~~g~~l~~~L~--~l~----~~~-~i----~~vrG~Glm 332 (395)
T PRK03715 267 V-FEAGDQGGTYNGNPLMTAVGVAVISQLLA--PGFLEGVRARGEYLKEKLL--ELS----EER-GL----EGERGEGLL 332 (395)
T ss_pred c-ccCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH--HHh----hcC-Cc----CeEEcceeE
Confidence 2 11111111223456666666665554431 2344444444444443110 000 011 11 112567899
Q ss_pred EEEEeCCH--HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHH
Q 016612 302 LSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLIS 375 (386)
Q Consensus 302 ~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~ 375 (386)
+.+.+.+. ....+...++...|+.+... ..+.+|+++.. ++++++++
T Consensus 333 ~~i~l~~~~~~~~~~~~~~~~~~Gi~~~~~---------------------------~~~~lR~~p~l~~t~~ei~~~~~ 385 (395)
T PRK03715 333 RALLLGKDIGPQIVEKARDMQPDGLLLNAP---------------------------RPNLLRFMPALNVTTEEIDQMIA 385 (395)
T ss_pred EEEEecCchHHHHHHHHHhccCCCEEEeec---------------------------CCCEEEEeCCcccCHHHHHHHHH
Confidence 99998653 12223333333336643210 12349999864 77778888
Q ss_pred HHHHHHhc
Q 016612 376 DLDKALRT 383 (386)
Q Consensus 376 ~l~~~l~~ 383 (386)
.|.+++++
T Consensus 386 ~l~~~l~~ 393 (395)
T PRK03715 386 MLRSVLDK 393 (395)
T ss_pred HHHHHHHh
Confidence 88887765
No 265
>PRK05355 3-phosphoserine/phosphohydroxythreonine aminotransferase; Provisional
Probab=99.75 E-value=1.1e-16 Score=148.24 Aligned_cols=274 Identities=16% Similarity=0.128 Sum_probs=168.8
Q ss_pred chHHHHHHHHHhhcCC-C--ceEEe-CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 55 PTRDALESLLAKLDKA-D--RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~-~--~~i~~-~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
.+.+++++.++++++. + +.+++ ++|+.++. ++..++.+|+++++...+..+. .|..+++..|.. ..+...
T Consensus 48 ~~~~~~~~~l~~l~~~~~~~~v~~~~gsgt~~~Ea~~~nl~~~g~~~l~i~~G~fg~--r~~~~a~~~g~~-~~~~~~~~ 124 (360)
T PRK05355 48 AVAEEAEADLRELLNIPDNYKVLFLQGGASLQFAMVPMNLLGGGKKADYVDTGSWSK--KAIKEAKKYGEV-NVAASSED 124 (360)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEEcCCchHHHHHHHHhcCCCCCeEEEEECCHHHH--HHHHHHHHhCCc-eEEecccc
Confidence 4688899999999995 3 34444 45568887 5567899999988765544433 345778888865 333221
Q ss_pred ----CHHHHHh-hhCCCceEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccc
Q 016612 128 ----DLDEVAS-AIGPWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKF 201 (386)
Q Consensus 128 ----d~~~l~~-~~~~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~ 201 (386)
+..++++ .+++++++|.++|..+.||... |+++| +|+++++|.+++.|+.+-..+ +.|++++|.+|+
T Consensus 125 ~g~~~~~~~~~~~l~~~~~~V~~th~eTstGv~~~~i~~i------~g~l~vVDavss~g~~~idv~-~~d~~~~ssqK~ 197 (360)
T PRK05355 125 DGFTYIPPLDEWQLSDDAAYVHYTSNETIDGTEFHELPDT------GDVPLVADMSSDILSRPIDVS-KFGLIYAGAQKN 197 (360)
T ss_pred cCCCCCCChhhccCCCCCCEEEEccCCCcceEecCccccc------CCCcEEEEcCccccCccCCHH-HccEEEEecccc
Confidence 3334444 6777899999999999999998 77766 899999999999887652222 246999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHH-h----------hhhcCCCCCh-hhHHHHHhcCC------cHHHHHHHHHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYF-L----------QNAEGSGLAP-FDCWICLRGVK------TMALRVEKQQDNAQK 263 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~-~----------~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~~~ 263 (386)
+ ||+| .|+++++++.+.+ +.. . ......+.++ ...+.+..+++ .+..+.++..+.++.
T Consensus 198 l-gP~G--lg~l~~s~~~l~~-~~~~~~~~~~~~~~~~~~~~~~Tp~~~~i~aL~~aL~~i~~~gG~e~i~~r~~~l~~~ 273 (360)
T PRK05355 198 I-GPAG--LTIVIVREDLLGR-ALPSIPSMLDYKTHADNDSMYNTPPTFAIYLAGLVFKWLKEQGGVAAMEKRNQEKAAL 273 (360)
T ss_pred c-cCCc--eEEEEECHHHHhh-cccCCChHHHHHHHHhcCCccCCCcHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHH
Confidence 8 5888 6999998654432 222 1 1011112222 22222222222 234444555566666
Q ss_pred HHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC-CceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccccc
Q 016612 264 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA-GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 342 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~ 342 (386)
+.+.+++.+ ++..+. .+..+ ..+++|.+++......++..+...|+.+..|..
T Consensus 274 l~~~l~~~~-----~~~~~~----------~~~~rs~~v~sf~~~~~~~~~~~~~~~~~~Gi~~~~~~~----------- 327 (360)
T PRK05355 274 LYDAIDSSD-----FYRNPV----------APEDRSRMNVPFTLADEELDKKFLAEAKAAGLVGLKGHR----------- 327 (360)
T ss_pred HHHHHHhCC-----CcccCC----------ChhhcCCcEEEEEcCChHHHHHHHHHHHHCCCcccCCCC-----------
Confidence 666666553 110000 00112 356888887754445665666666775433321
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 343 HASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
..+.||+|+.. ++++.+++.|++.++
T Consensus 328 --------------~~g~vRiS~~~~nt~eei~~l~~~l~~~~~ 357 (360)
T PRK05355 328 --------------SVGGMRASIYNAMPLEGVQALVDFMKEFER 357 (360)
T ss_pred --------------ccCcEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 13569999975 555666666655554
No 266
>TIGR01366 serC_3 phosphoserine aminotransferase, putative. This model represents a putative variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in Mycobacterium tuberculosis and related high-GC Gram-positive bacteria.
Probab=99.74 E-value=9.1e-17 Score=148.95 Aligned_cols=158 Identities=12% Similarity=0.042 Sum_probs=109.5
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEe-CcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCH
Q 016612 55 PTRDALESLLAKLDKAD--R-ALCF-TSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDL 129 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~-~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~ 129 (386)
...+++++.++++++.+ . .+++ +|||.++++ +..++.+ +.+++....|+.....+.......+ ++..++....
T Consensus 41 ~~~~~~r~~l~~l~~~~~~~~v~f~~gs~T~a~~~~~~~l~~~-~~l~i~~G~~~~~~~~~a~~~~~~~-~~~~~~~~~~ 118 (361)
T TIGR01366 41 NLVGRVREGLAELFSLPDGYEVILGNGGATAFWDAATFGLIEK-KSLHLSFGEFSSKFAKAVKLAPWLG-EPIIVTADPG 118 (361)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEECCchhHHHHHHHHhcccc-cccEEecCHHHHHHHHHHHhhhccC-CceEEecCCC
Confidence 46888999999999973 2 4444 447899985 4455543 3344555566544433322221123 4455544333
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCce
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM 209 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~ 209 (386)
+.++..+++++++|.++|.+|.||.+.|+++| ++++|+++++|.+++.|+.+-..+ ..|++++|.+|++++|+|
T Consensus 119 ~~~~~~~~~~~~lV~~~h~et~tG~~~pi~~I---~~~~g~~~iVDavqs~g~~~idv~-~~D~~~~s~~K~lg~~~G-- 192 (361)
T TIGR01366 119 SAPEPQADPGVDVIAWAHNETSTGVAVPVRRP---EGSDDALVVIDATSGAGGLPVDIA-ETDVYYFAPQKNFASDGG-- 192 (361)
T ss_pred CCCCCccCCCCCEEEEcccCCccceecccccc---cccCCCeEEEEcCccccCCCCCHH-HCCEEEEEchhhcCCCCc--
Confidence 34444566799999999999999999999888 588999999999999988753333 389999999999988776
Q ss_pred EEEEEEcChhH
Q 016612 210 AGVLAVKGERL 220 (386)
Q Consensus 210 ~G~i~~~~~~~ 220 (386)
.++++.+++.+
T Consensus 193 l~~~~~s~~~~ 203 (361)
T TIGR01366 193 LWLAIMSPAAL 203 (361)
T ss_pred eEEEEECHHHH
Confidence 56667775544
No 267
>TIGR02618 tyr_phenol_ly tyrosine phenol-lyase. This model describes a group of tyrosine phenol-lyase (4.1.99.2) (beta-tyrosinase), a pyridoxal-phosphate enzyme closely related to tryptophanase (4.1.99.1) (see model TIGR02617). Both belong to the beta-eliminating lyase family (pfam01212)
Probab=99.74 E-value=9.9e-16 Score=141.40 Aligned_cols=292 Identities=16% Similarity=0.144 Sum_probs=184.5
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-----
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----- 126 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----- 126 (386)
|+|...++++.+++++|.+..+.+++|+.|++++.. .++|||.| +.+.|..+.. ...+..|..++.++.
T Consensus 69 g~~s~~~lE~~va~~~G~~~av~v~sGT~Al~ll~~l~l~pGDeV--psn~~f~Tt~---ahIe~~Gav~vDi~~dea~~ 143 (450)
T TIGR02618 69 GSRNFYHLERTVRELYGFKYVVPTHQGRGAENLLSQIAIKPGDYV--PGNMYFTTTR---YHQEKNGATFVDIIIDEAHD 143 (450)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEcCCHHHHHHHHHHhCCCCcCEE--CCceeHHHHH---HHHHhCCeEEEeeecccccc
Confidence 667899999999999999999999999999875544 58999976 6677755543 223456665555521
Q ss_pred ----------CCHHHHHhhhCC----CceEEEEeCCCCCC-cccc---cHHHHHHHHHHcCCEEEEeCCCCCC--Cc---
Q 016612 127 ----------CDLDEVASAIGP----WTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMSP--VL--- 183 (386)
Q Consensus 127 ----------~d~~~l~~~~~~----~~~~v~~~~~~npt-G~~~---~l~~i~~la~~~~~~li~D~a~~~~--~~--- 183 (386)
.|++++++.+++ ++++|.+++++|.. |... ++++|.++|++||+.||.|.++..+ .+
T Consensus 144 ~~~~~p~~GniD~~~Le~aI~~~~~~~~~lV~~e~t~N~~GG~pvs~~~l~~I~elA~~~Gl~vi~DaAR~~gNA~~I~~ 223 (450)
T TIGR02618 144 AQLNIPFKGNVDLKKLQKLIDEVGADKIPYICLAVTVNLAGGQPVSMANMREVRELCEAHGIKVFYDATRCVENAYFIKE 223 (450)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCcccCceEEEEecccCCCeeCCHHHHHHHHHHHHHcCCEEEEEccchhhChhhhhc
Confidence 189999999974 45578888888865 6774 5899999999999999999998652 22
Q ss_pred ------cCCC-------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC-----CCChhhHHHHHh
Q 016612 184 ------SRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-----GLAPFDCWICLR 245 (386)
Q Consensus 184 ------~~~~-------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~ 245 (386)
..+. ...+|.+++|+.|..++|- +|+++.+++++.++.+.+....+. +++.....++..
T Consensus 224 re~g~~~~~i~ei~~e~~~~aD~~~~S~~Kd~~~~~---GG~l~~~d~~l~~k~r~~~~~~eG~~tyGgla~r~~~ala~ 300 (450)
T TIGR02618 224 REQGYEDKSIAEILKEMMSYADGCTMSGKKDCLVNI---GGFLCMNDDEMFQSAKELVVVFEGMPSYGGLAGRDMEAMAI 300 (450)
T ss_pred ccccccCCCHHHHHHHHhccCcEEEEeeccCCCCCC---ceEEEeCCHHHHHHHHHHhhhcCCccccCchhhhhHHHHHH
Confidence 1111 1258999999999997765 699998888888877666433221 223322222222
Q ss_pred cCCcH--HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE------------eCCHHh
Q 016612 246 GVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL------------TGSLAL 311 (386)
Q Consensus 246 ~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~------------~~~~~~ 311 (386)
+++.. ....+....+++.|.+.|.+.. + +-.... .|..+.+. ++....
T Consensus 301 gL~e~~~~~y~~~r~~~a~~La~~L~~~G-v-----pv~~p~------------ggh~V~vda~~~lph~~~~~~p~~al 362 (450)
T TIGR02618 301 GIREAVDYEYIEHRVKQVRYLGDKLKAAG-V-----PIVEPV------------GGHAVFLDARRFLPHIPQDQFPAQSL 362 (450)
T ss_pred HHHHhhhHHHHHHHHHHHHHHHHHHHHCC-C-----cccCCC------------CcceEEEEhHHhCCCCChhhChHHHH
Confidence 33222 1233344456778888887652 1 111111 12333332 234556
Q ss_pred HHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHHHHhc
Q 016612 312 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 312 ~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~~l~~ 383 (386)
+..++.+.+++++-...-.. -..|-..... ...-.++|+.+. ..+++...+.+....++
T Consensus 363 ~~~ly~~~gir~~e~g~~~~---~~~~~~~~~~----------~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 426 (450)
T TIGR02618 363 AASIYVETGVRSMERGIVSA---GRNNVTGEHH----------RPKLELVRLTIPRRVYTYAHMDVVADGIIKLYKH 426 (450)
T ss_pred HHHHHHHhCccEEeecceec---ccCCCCCccc----------CCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 66777777777664221000 0011110000 001367999985 47888888888776654
No 268
>PRK13237 tyrosine phenol-lyase; Provisional
Probab=99.72 E-value=4.2e-15 Score=137.66 Aligned_cols=301 Identities=17% Similarity=0.147 Sum_probs=184.1
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC------
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN------ 125 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~------ 125 (386)
|+|...++++.+++++|.+..+.+++||.|++++.. .++|||.| +...|..+... .....|..++-++
T Consensus 76 gd~s~~~LE~~vAe~lG~e~aV~v~sGTaAl~ll~~l~v~pGd~V--p~n~~f~Tt~a---hI~~~Ga~fvDi~~d~a~~ 150 (460)
T PRK13237 76 GSRNFYHLEETVQEYYGFKHVVPTHQGRGAENLLSRIAIKPGQYV--PGNMYFTTTRY---HQELNGGIFVDIIIDEAHD 150 (460)
T ss_pred CCCcHHHHHHHHHHHHCCCeEEEeCCHHHHHHHHHHhCCCCcCEE--CCccchHhhHH---HHHhCCcEEEeeecccccc
Confidence 557889999999999999999999999999876544 57899964 55555544322 1245555444331
Q ss_pred ------C---CCHHHHHhhhCC----CceEEEEeCCCCCCc-ccc---cHHHHHHHHHHcCCEEEEeCCCCCCC---c--
Q 016612 126 ------T---CDLDEVASAIGP----WTKLVWVESPTNPRQ-QIC---DIRKIAEMAHAHGALLLVDNSIMSPV---L-- 183 (386)
Q Consensus 126 ------~---~d~~~l~~~~~~----~~~~v~~~~~~nptG-~~~---~l~~i~~la~~~~~~li~D~a~~~~~---~-- 183 (386)
. .|++++++.+++ +++++.+..++|..| ... ++++|.++|++||+.||+|.++..+. +
T Consensus 151 ~~~~~p~tgnlD~d~Le~~I~~~~~~~~~lV~a~itvn~~GGqpvs~~~m~~I~elA~~~Gl~Vi~DaAra~gna~fI~~ 230 (460)
T PRK13237 151 AQSDHPFKGNVDLDKLQALIDEVGAENIAYICLAVTVNLAGGQPVSMANMRAVRELCDKHGIKVFFDATRCVENAYFIKE 230 (460)
T ss_pred cccCCCCCCCcCHHHHHHHhccccCCccCceEEEEecccCCCeeCCHHhHHHHHHHHHHcCCEEEEECcchhcChhhhcc
Confidence 1 289999999874 345677777888774 444 68999999999999999999987551 1
Q ss_pred ------cCCC-------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhc-C----CCCChhhHHHHHh
Q 016612 184 ------SRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-G----SGLAPFDCWICLR 245 (386)
Q Consensus 184 ------~~~~-------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~ 245 (386)
..+. ....|.+++|++|.+.++. +|+++++++++.++.+.+.... | .+++.-...++..
T Consensus 231 re~~y~~~~i~ei~~e~~s~aD~~t~S~~K~~~~~~---GG~i~t~D~eL~~~~r~~~~~~eG~~tygg~~grd~~alAv 307 (460)
T PRK13237 231 REEGYQDKSIKEIVHEMFSYADGCTMSGKKDCLVNI---GGFLAMNDEELFDEAKELVVVYEGMPSYGGMAGRDMEAMAI 307 (460)
T ss_pred cccccCCCcHhHHhhhccCcCcEEEEeCCCCCCCCC---ceEEEECCHHHHHHHHHhccccCCCcCCCChhhhHHHHHHh
Confidence 1111 1257999999999997754 6999999999988877664332 1 1332312222222
Q ss_pred cCCc-H-HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcce
Q 016612 246 GVKT-M-ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 323 (386)
Q Consensus 246 ~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 323 (386)
++.. . .....+..++++.|.+.|.+..- .+. ....||.++.+-.+-...+-.-.++....+..++.+.++++
T Consensus 308 gl~E~~~~~y~~~ri~~~~~l~~~L~~~Gv--pv~----~p~ggH~v~vda~~~lph~~~~~~p~~al~~~ly~~~GiR~ 381 (460)
T PRK13237 308 GIEESVQYEYIEHRVGQVRYLGEKLLAAGV--PIV----EPVGGHAVFLDARRFLPHLPQDQFPAQALAAELYIESGVRS 381 (460)
T ss_pred HHHhhchHHHHHHHHHHHHHHHHHHHHCCC--cee----cCCCceEEEEEhHHhCCCCCcccChHHHHHHHHHHHhCcCe
Confidence 2221 1 24455666778888888876531 111 11222322211100000011112344566777788877777
Q ss_pred ecc---CCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHHHHhc
Q 016612 324 ITV---SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 324 i~~---~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~~l~~ 383 (386)
+-. ..|. .|-..... ..+-.++|+.+. ..+++...+.+....++
T Consensus 382 ~e~g~~~~~~------~~~~~~~~----------~~~~el~rlaiprr~yt~~h~~~v~~~~~~~~~~ 433 (460)
T PRK13237 382 MERGIVSAGR------DPKTGENH----------YPKLELVRLTIPRRVYTYAHMDVVADSVIKLYKH 433 (460)
T ss_pred Eeecceeccc------CCCCCccC----------CCccceeeeccccccccHHHHHHHHHHHHHHHHh
Confidence 632 1111 11110000 001367999985 47888888888776654
No 269
>PF01276 OKR_DC_1: Orn/Lys/Arg decarboxylase, major domain; InterPro: IPR000310 Pyridoxal-dependent decarboxylases are bacterial proteins acting on ornithine, lysine, arginine and related substrates []. One of the regions of sequence similarity contains a conserved lysine residue, which is the site of attachment of the pyridoxal-phosphate group.; GO: 0003824 catalytic activity; PDB: 1C4K_A 1ORD_A 2X3L_B 3Q16_C 3N75_A 2VYC_D.
Probab=99.72 E-value=1.5e-16 Score=146.39 Aligned_cols=157 Identities=27% Similarity=0.375 Sum_probs=120.8
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...+.++.+++.||++...++++|| .++. +++++++|||.|++++.+|-+..+. +...|+.++++++.
T Consensus 67 ~I~eAe~~aA~~fGAd~t~flvnGsT~g~~a~i~a~~~~gd~VLv~RN~HkSv~~a----lil~ga~Pvyi~p~~~~~gi 142 (417)
T PF01276_consen 67 IIKEAEELAARAFGADKTFFLVNGSTSGNQAMIMALCRPGDKVLVDRNCHKSVYNA----LILSGAIPVYIPPEDNEYGI 142 (417)
T ss_dssp HHHHHHHHHHHHHTESEEEEESSHHHHHHHHHHHHHTTTTCEEEEETT--HHHHHH----HHHHTEEEEEEEEEE-TTS-
T ss_pred HHHHHHHHHHHhcCCCeEEEEecCchHHHHHHHHHhcCCCCEEEEcCCcHHHHHHH----HHHcCCeEEEecCCccccCC
Confidence 6889999999999999888888887 6665 6788999999999999999888643 34677888877652
Q ss_pred ----CH-----HHHHhhhC--CCce---EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-----ccCCCC
Q 016612 128 ----DL-----DEVASAIG--PWTK---LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LSRPLE 188 (386)
Q Consensus 128 ----d~-----~~l~~~~~--~~~~---~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-----~~~~~~ 188 (386)
++ ++++++++ +..+ ++++++|++ .|.+.|+++|+++|++++++|++||||+.-. ..+...
T Consensus 143 ~~~i~~~~~~~~~i~~~l~~~p~~k~~~~vvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~lp~~a~~ 221 (417)
T PF01276_consen 143 IGGISPDEFNEEDIEEALKEHPDAKAPRLVVLTSPTY-YGVCYDIKEIAEICHKHGIPLLVDEAHGAHFGFHPLPRSALA 221 (417)
T ss_dssp BEEB-GGGGSHHHHHHHHHHCTTCHCESEEEEESS-T-TSEEE-HHHHHHHHCCTECEEEEE-TT-TTGGCSGGGTTCSS
T ss_pred ccCCChhhhhHHHHHHHHHhCccccCceEEEEeCCCC-CeEEECHHHHHHHhcccCCEEEEEccccccccCCCCccchhh
Confidence 44 88888886 3444 499999988 6999999999999999999999999987421 113345
Q ss_pred CCcc-------EEEeccccccccCCCceEEEEEEcChh
Q 016612 189 LGAD-------IVMHSATKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 189 ~~~d-------i~~~S~sK~~~g~~g~~~G~i~~~~~~ 219 (386)
.++| +++.|.||.+.+... .+++..++..
T Consensus 222 ~gad~~~~~~~~vvqS~HKtL~altQ--ts~lh~~~~~ 257 (417)
T PF01276_consen 222 LGADRPNDPGIIVVQSTHKTLPALTQ--TSMLHVKGDR 257 (417)
T ss_dssp TTSS-CTSBEEEEEEEHHHHSSS-TT---EEEEEETCC
T ss_pred ccCccccccceeeeechhhccccccc--ceEEEecCCC
Confidence 6889 999999999987765 8898888764
No 270
>PLN03226 serine hydroxymethyltransferase; Provisional
Probab=99.71 E-value=5.4e-15 Score=140.90 Aligned_cols=289 Identities=20% Similarity=0.177 Sum_probs=165.9
Q ss_pred CCchHHHHHH----HHHhhcCCC-ceEEe----CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHH--hhhcc--cCC
Q 016612 53 GNPTRDALES----LLAKLDKAD-RALCF----TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLL--SRVTP--KTG 118 (386)
Q Consensus 53 g~~~~~~l~~----~l~~~~g~~-~~i~~----~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~--~~~~~--~~g 118 (386)
|....+++++ ...+.++.+ ..+.+ .||+.|.. ++.++++|||.|++.+..++++..+. ....+ ..+
T Consensus 74 G~~~~d~lE~~~~~~~~~~f~~~~~~~~~nv~~~SG~~AN~av~~aL~~pgD~Il~~d~~~gGhl~H~~~~~g~~~s~~~ 153 (475)
T PLN03226 74 GNEYIDQIETLCQKRALEAFRLDPEKWGVNVQPLSGSPANFAVYTALLQPHDRIMGLDLPHGGHLSHGYQTDGKKISATS 153 (475)
T ss_pred CChhHHHHHHHHHHHHHHHhCCCcceeEEecCcCchHHHHHHHHHHhCCCCCEEEECCCCcCcchhhhhhhcccccccce
Confidence 5555666665 455566765 44444 88997765 77889999999998554333332210 01111 122
Q ss_pred cEEE--EeCCC------CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-----
Q 016612 119 VVVK--RVNTC------DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----- 184 (386)
Q Consensus 119 ~~~~--~v~~~------d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----- 184 (386)
..+. .+..+ |++++++.+. .++++|++. .++ +|...|+++|.++|+++|+++++|++|+.|...
T Consensus 154 ~~~~~~~y~~~~~~g~iD~d~Le~~l~~~~pklIv~~-~S~-~s~~~D~a~i~~ia~~~ga~LlvD~AH~~Gli~~~~~~ 231 (475)
T PLN03226 154 IYFESMPYRLDESTGLIDYDKLEKKAMLFRPKLIIAG-ASA-YPRDWDYARMRKIADKVGALLMCDMAHISGLVAAQEAA 231 (475)
T ss_pred EEEEeeeeeecCCCCCcCHHHHHHHHhhcCCeEEEEe-cCc-CCCccCHHHHHHHHHHcCCEEEEEchhhhCcccCCCCC
Confidence 1111 22222 9999999886 577776653 333 678889999999999999999999999887654
Q ss_pred CCCCCCccEEEeccccccccCCCceEEEEEEcChhH-------------HHHHHHhh-hhcCCCCChhhHHHHHhcCCc-
Q 016612 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-------------AKELYFLQ-NAEGSGLAPFDCWICLRGVKT- 249 (386)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~- 249 (386)
.+.. ++|++++|+||++.||. +|++++++... .+...... .....+.+....+++..+++.
T Consensus 232 ~p~~-~~Div~~t~hK~L~GP~---Gg~I~~~~~~~~~~~~g~~~~~d~~~~i~~a~~~~~~g~p~~~~iaal~aAl~~i 307 (475)
T PLN03226 232 SPFE-YCDVVTTTTHKSLRGPR---GGMIFFRKGPKPPKGQGEGAVYDYEDKINFAVFPGLQGGPHNHTIAALAVALKQA 307 (475)
T ss_pred CCCC-CCeEEEecCcccccCCC---ceEEEEchhhcccccCCCccHHHHHHHhccccCCccCCCchHHHHHHHHHHHHHH
Confidence 2232 78999999999998776 58888865321 11111110 111223333333333333322
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhcCccee
Q 016612 250 ----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETTKYFSI 324 (386)
Q Consensus 250 ----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~gi 324 (386)
...+.++..++++.+.+.+.+.. + .+...+ ....++.+.+. ......++.+.|...++
T Consensus 308 ~~~~~~~~~~~~~~na~~L~~~L~~~G-~-~l~~~~---------------t~~hi~lv~~~~~gi~~~~~~~~L~~~~I 370 (475)
T PLN03226 308 MTPEFKAYQKQVKANAAALANRLMSKG-Y-KLVTGG---------------TDNHLVLWDLRPLGLTGSRVEKVLDLAHI 370 (475)
T ss_pred hCcCHHHHHHHHHHHHHHHHHHHHhCC-C-EEEcCC---------------CCCCEEEEEccCCCCCHHHHHHHHHHCCC
Confidence 33456777788888888777632 1 111111 01345555542 11123344455555566
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--------ccCChHHHHHHHHHHHh
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--------GIEDVNDLISDLDKALR 382 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--------~~~~~~~~i~~l~~~l~ 382 (386)
.++.+.. |.. . ....++.||++. +.++++++.+.|.++++
T Consensus 371 ~~nk~~~------p~~-~-----------~~~~~~giRiGt~~lt~~g~~~~d~~~ia~~i~~~~~ 418 (475)
T PLN03226 371 TLNKNAV------PGD-S-----------SALVPGGVRIGTPAMTSRGLVEKDFEKVAEFLHRAVT 418 (475)
T ss_pred EECCCCC------CCC-c-----------ccCCCCCcccCcHHHHHCCCCHHHHHHHHHHHHHHHH
Confidence 5554321 100 0 011234477754 34778888888888886
No 271
>PRK08088 4-aminobutyrate aminotransferase; Validated
Probab=99.71 E-value=3.8e-16 Score=148.27 Aligned_cols=289 Identities=13% Similarity=0.148 Sum_probs=166.4
Q ss_pred CCchHHHHHHHHHhhcCC---CceEEeCcHHHHHHH-H---HHhcCCCCEEEecCCCCCcHHHHHhhhccc-----CC--
Q 016612 53 GNPTRDALESLLAKLDKA---DRALCFTSGMAALAA-V---THLLGTGEEIVAGDDLYGGTDRLLSRVTPK-----TG-- 118 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~-~---~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-----~g-- 118 (386)
+++...++.+.+.+..+. +..++++||++|+.. + ....++ ..|++-+++|++........-.. .+
T Consensus 82 ~~~~~~~la~~l~~~~~~~~~~~~~f~~sGsea~e~Alklar~~~~r-~~iv~~~~~yHG~~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK08088 82 AYEPYLELCEKMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKR-SGVIAFTGAYHGRTHYTLALTGKVNPYSAGMG 160 (425)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHHhCC-CeEEEECCccCCccHHHHHhhCCCCccccCCC
Confidence 455556777778777654 367889999987753 2 223344 45565578777764332221110 01
Q ss_pred -----cEEEEeCCC--------CHHHHHhhhC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeC
Q 016612 119 -----VVVKRVNTC--------DLDEVASAIG-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 119 -----~~~~~v~~~--------d~~~l~~~~~-----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~ 176 (386)
.....++.. +++++++.+. +++++|+++......|.+.+ +++|.++|+++|+++|+||
T Consensus 161 ~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~aavi~Epi~~~~G~~~~~~~~~~~l~~l~~~~~~~lI~De 240 (425)
T PRK08088 161 LMPGHVYRALYPCPLHGVSEDDAIASIERIFKNDAAPEDIAAIIIEPVQGEGGFYAASPAFMQRLRALCDEHGIMLIADE 240 (425)
T ss_pred CCCCCcEEcCCCccccCccHHHHHHHHHHHHHhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 111112211 1456777664 56789999877666676654 8999999999999999999
Q ss_pred CCCC-CCccCC---CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH
Q 016612 177 SIMS-PVLSRP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL 252 (386)
Q Consensus 177 a~~~-~~~~~~---~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (386)
+++. +..... ...+.+.-+.|+||.++ +|+|+|+++++ +++.+.+...........++..+.++...++....
T Consensus 241 v~~g~g~~g~~~~~~~~~~~pdi~s~sK~l~--~G~rig~v~~~-~~~~~~~~~~~~~~t~~~~~~~~~a~~~~l~~~~~ 317 (425)
T PRK08088 241 VQTGAGRTGTLFAMEQMGVAADLTTFAKSIA--GGFPLAGVTGR-AEVMDAIAPGGLGGTYAGNPIACAAALAVLKVFEQ 317 (425)
T ss_pred cccCCCcCcchhHHhhcCCCCCEEEEecccc--CCCcceeeEec-HHHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHh
Confidence 9873 111111 11233344678999995 36899999996 45655554433333445566666666555443211
Q ss_pred --HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--------CHHhHHHHHhhcCcc
Q 016612 253 --RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYF 322 (386)
Q Consensus 253 --~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~ 322 (386)
..+...+..+.+.+.+.+.. ...+. ....++.|.++++.+. +......+.+.+...
T Consensus 318 ~~~~~~~~~~~~~~~~~l~~l~----------~~~~~----~~~v~g~G~~~~l~l~~~~~~~~p~~~~~~~l~~~~~~~ 383 (425)
T PRK08088 318 ENLLQKANALGEKLKDGLLAIA----------EKHPE----IGDVRGLGAMIAIELFEDGDHSKPNAKLTAQIVARARDK 383 (425)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH----------HhCCC----eEEEeccceEEEEEEecCCCCCCCCHHHHHHHHHHHHhC
Confidence 11122222222222222210 11111 0112455888898872 234467788888777
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
|+...++.. ..+.||++++. +++++.++.|.+++++.
T Consensus 384 Gv~~~~~~~-------------------------~~~~iRl~~~~~~t~~ei~~~i~~l~~~l~~~ 424 (425)
T PRK08088 384 GLILLSCGP-------------------------YYNVLRILVPLTIEDAQIRQGLEIIAQCFDEA 424 (425)
T ss_pred CCEEecCCC-------------------------CCCEEEEECCCCcCHHHHHHHHHHHHHHHHhh
Confidence 865432211 13559999873 77788888888888653
No 272
>TIGR00713 hemL glutamate-1-semialdehyde-2,1-aminomutase. This enzyme, glutamate-1-semialdehyde-2,1-aminomutase (glutamate-1-semialdehyde aminotransferase, GSA aminotransferase), contains a pyridoxal phosphate attached at a Lys residue at position 283 of the seed alignment. It is in the family of class III aminotransferases.
Probab=99.71 E-value=8.8e-16 Score=146.11 Aligned_cols=311 Identities=14% Similarity=0.115 Sum_probs=179.7
Q ss_pred CCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC-CceEEeCcHHHHHHHHHH---hcCCCCEE
Q 016612 21 DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA-DRALCFTSGMAALAAVTH---LLGTGEEI 96 (386)
Q Consensus 21 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~-~~~i~~~~gt~al~~~~~---~~~~g~~V 96 (386)
..+|..+|.+.++..... .. .. .|. ..++...++.+.+++++.. +..++++||++|+.+.+. ....+++|
T Consensus 60 ~~lGh~~p~v~~ai~~q~---~~-~~-~~~-~~~~~~~~lae~l~~~~~~~~~v~~~~sGseA~e~Alk~ar~~~gr~~i 133 (423)
T TIGR00713 60 LILGHAHPRVVEAVKEAL---ER-GT-SYG-APTEAEILLAKEIISRVPSVEMVRFVNSGTEATMSAVRLARGYTGRDKI 133 (423)
T ss_pred cccCCCCHHHHHHHHHHH---Hh-CC-cCC-CCCHHHHHHHHHHHHhCCcccEEEEeCCHHHHHHHHHHHHHHhhCCCEE
Confidence 336777777665432211 11 11 121 1234567788888887653 478888999999864333 23456899
Q ss_pred EecCCCCCcHHHHHhhh----------------cccCCcEEEEeCCCCHHHHHhhhC---CCceEEEEe-CCCCCCcccc
Q 016612 97 VAGDDLYGGTDRLLSRV----------------TPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVE-SPTNPRQQIC 156 (386)
Q Consensus 97 lv~~~~~~~~~~~~~~~----------------~~~~g~~~~~v~~~d~~~l~~~~~---~~~~~v~~~-~~~nptG~~~ 156 (386)
++.++.|++........ ....+.....++..|++++++.++ +++++|+++ .++| +|.+.
T Consensus 134 i~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aavi~ep~~~~-~G~~~ 212 (423)
T TIGR00713 134 IKFEGCYHGHHDALLVKAGSGAATLGLPTSPGVPEDFAKLTLVLPYNDLEALEEVFEEYGEEIAGVIVEPVAGN-MGVVP 212 (423)
T ss_pred EEEcCCCCCChhhhhccccCcccccCCCCCCCCCcccccceEEeCCCCHHHHHHHHHHcCCcEEEEEEeCCCCC-CCCcC
Confidence 99999998864221110 000111234455568999998886 578899997 6666 78887
Q ss_pred c----HHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh
Q 016612 157 D----IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (386)
Q Consensus 157 ~----l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~ 227 (386)
+ +++|.++|++||+++|+||+|...... .......|++ ++||.++ +|+++|+++++ +++.+.+...
T Consensus 213 ~~~~~l~~l~~l~~~~~~llI~DEv~~g~r~g~~~~~~~~~~~pDi~--t~sK~l~--~G~pig~v~~~-~~i~~~~~~~ 287 (423)
T TIGR00713 213 PKPEFLAGLRALTEEYGSLLIFDEVMTGFRVALGGAQEYFGVEPDLT--TLGKIIG--GGLPVGAFGGR-REIMERLAPE 287 (423)
T ss_pred CCHHHHHHHHHHHHHhCCEEEEEccccccccCcchhHHHhCCCcchh--hhhhhhc--CCCceeeeeEH-HHHHHhhCcC
Confidence 5 789999999999999999998532211 1112345654 6899995 46899999987 4565555321
Q ss_pred ---hhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceE
Q 016612 228 ---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 302 (386)
Q Consensus 228 ---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 302 (386)
......+.++..++++...++.+.. ..+...+..+.+.+.+.+. ++.++ .. ...++.|.++
T Consensus 288 ~~~~~~~T~~~~~~~~aaa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~----------~~~~~-~~---~~v~~~g~~~ 353 (423)
T TIGR00713 288 GPVYQAGTLSGNPLAMAAGLATLKLLDEEGVYTELDELAKRLAEGLSEV----------LEDTG-IP---HTVNRVGSMF 353 (423)
T ss_pred CCeeeccCCCCCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH----------HHhcC-CC---eEEEeeccEE
Confidence 1112234566666665555443221 1223333333333333321 00000 00 0113456777
Q ss_pred EEEeCC-------------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--cc
Q 016612 303 SFLTGS-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--GI 367 (386)
Q Consensus 303 ~~~~~~-------------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~ 367 (386)
.+.+.. ......+.+.+..+|+.+..+. .+.+|+++ +.
T Consensus 354 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~---------------------------~~~~~l~~~~t~ 406 (423)
T TIGR00713 354 SLFFTEEEVTNYADAKKSDTELFAKFFHEMLDKGVFLPPSQ---------------------------FEACFLSAAHTE 406 (423)
T ss_pred EEEEecCCCCChhhhhcccHHHHHHHHHHHHHCCeEEecCC---------------------------ccceeeECCCCH
Confidence 765531 1123456666666777654321 11267776 45
Q ss_pred CChHHHHHHHHHHHhcC
Q 016612 368 EDVNDLISDLDKALRTG 384 (386)
Q Consensus 368 ~~~~~~i~~l~~~l~~~ 384 (386)
++++++++.|.++|+++
T Consensus 407 ~~i~~~~~~l~~~l~~~ 423 (423)
T TIGR00713 407 EDIENTIEAAEEVFAEL 423 (423)
T ss_pred HHHHHHHHHHHHHHhhC
Confidence 88899999999888753
No 273
>PRK08117 4-aminobutyrate aminotransferase; Provisional
Probab=99.71 E-value=2.1e-16 Score=150.38 Aligned_cols=319 Identities=17% Similarity=0.143 Sum_probs=178.8
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-C-CceEEeCcHHHHHHHHHHh---cCCCC
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-A-DRALCFTSGMAALAAVTHL---LGTGE 94 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g-~-~~~i~~~~gt~al~~~~~~---~~~g~ 94 (386)
+..+|..+|.+.++....... ......+...++...++.+.|+++++ . +..++++||++|..+.+.+ .....
T Consensus 54 ~~~lGh~~p~v~~a~~~q~~~---~~~~~~~~~~~~~~~~la~~L~~~~~~~~~~v~f~~SGseA~e~AlklAr~~tgr~ 130 (433)
T PRK08117 54 VANVGHRHPKVVQAIKEQADK---LMHGPSGVIYYESILKLAEELAEITPGGLDCFFFSNSGAEAIEGALKLAKHVTKRP 130 (433)
T ss_pred hccCCCCCHHHHHHHHHHHHh---ccCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHHHHHHHHHhcCCC
Confidence 556787777766642222111 11111111234677888899999873 2 3556668999998643332 33345
Q ss_pred EEEecCCCCCcH-HHHHhhhcc-------cCC---cEEEEeCCC-----------------CHHHHHhhhC-----CCce
Q 016612 95 EIVAGDDLYGGT-DRLLSRVTP-------KTG---VVVKRVNTC-----------------DLDEVASAIG-----PWTK 141 (386)
Q Consensus 95 ~Vlv~~~~~~~~-~~~~~~~~~-------~~g---~~~~~v~~~-----------------d~~~l~~~~~-----~~~~ 141 (386)
+|+.-+..|++. ...+ .+.. .+. ..+..++.. +++++++.++ +++.
T Consensus 131 ~ii~~~~~yHG~t~~~~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a 209 (433)
T PRK08117 131 YIISFTGCFHGRTLGAL-SVTTSKSKYRKYYQPLLGSVYQAPYPYCDRCPKGEDPEVCFLECLRDLESLFKHQVTPEEVA 209 (433)
T ss_pred eEEEECCCcCCcCHHHH-hhcCCCccccccCCCCCCCcEEeCCCccccccccCchhHHHHHHHHHHHHHHHhccCCCcEE
Confidence 677666666554 2221 1110 000 011222211 4455665542 4688
Q ss_pred EEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCccCC-----CCCCccEEEeccccccccCCCceEE
Q 016612 142 LVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAGHSDVMAG 211 (386)
Q Consensus 142 ~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~~-----~~~~~di~~~S~sK~~~g~~g~~~G 211 (386)
+|+++......|.+.+ +++|.++|++||+++|+||+++. +..... .....|+ .+++|.++ +|+++|
T Consensus 210 avi~Epi~~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tG~gr~G~~~~~~~~gv~pDi--~t~sK~lg--~G~pig 285 (433)
T PRK08117 210 AVIIEPVLGEGGYIVPPKSFLKKLREICDRHGILLIFDEVQTGFGRTGEWFAAQTFGVVPDI--MTIAKGIA--SGLPLS 285 (433)
T ss_pred EEEECCeeCCCCCccCCHHHHHHHHHHHHHcCCEEEEecchhccCccccchhHhhcCCCCCE--eehhhhcc--CCCcce
Confidence 9999999888899887 99999999999999999999873 111111 1223465 57899995 368899
Q ss_pred EEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhh
Q 016612 212 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 291 (386)
Q Consensus 212 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~ 291 (386)
+++++ +++.+.+.........+.++...++....++.+.. +.+.++.+.+.+++++.-. . +. ..++ +
T Consensus 286 av~~~-~~i~~~~~~~~~~~T~~~np~~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~--~-l~---~~~~---~- 352 (433)
T PRK08117 286 AVVAS-KELMEQWPLGSHGTTFGGNPVACAAALATLEVIKE--EKLLDNANEMGAYALERLE--V-LK---EKHP---V- 352 (433)
T ss_pred eEEEc-HHHHhhccCCCCCCCCCcCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH--H-HH---hcCC---c-
Confidence 99887 45555443222222234466666666665553321 2333444444444432110 0 00 0010 0
Q ss_pred hhccCCCCceEEEEeC------CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe
Q 016612 292 YSQAKGAGSVLSFLTG------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 365 (386)
Q Consensus 292 ~~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 365 (386)
..+.++.|.++.+.+. +......+.+.+...|+...+.. ...+++|+++
T Consensus 353 ~~~vrg~Gl~~gi~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g-------------------------~~~~~lRl~p 407 (433)
T PRK08117 353 IGDVRGIGLMIGIEIVDPDGEPDGDAVEKILDKCLEKGLLFYLCG-------------------------NAGNVLRMIP 407 (433)
T ss_pred eeeeecCCcEEEEEEecCCCCcchHHHHHHHHHHHHCCCEEeecC-------------------------CCCCEEEEeC
Confidence 0122556777777772 23345667777777777543211 1235699996
Q ss_pred c----cCChHHHHHHHHHHHhcC
Q 016612 366 G----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 366 ~----~~~~~~~i~~l~~~l~~~ 384 (386)
+ .+++++.++.|.++++++
T Consensus 408 ~~~~t~~~i~~~~~~l~~~l~~~ 430 (433)
T PRK08117 408 PLTVTKEEIDEGLDILDEALTEY 430 (433)
T ss_pred CccCCHHHHHHHHHHHHHHHHHH
Confidence 4 488888888888888653
No 274
>PRK04612 argD acetylornithine transaminase protein; Provisional
Probab=99.71 E-value=5.9e-16 Score=145.48 Aligned_cols=286 Identities=15% Similarity=0.178 Sum_probs=167.6
Q ss_pred CchHHHHHHHHHhhcCC-CceEEeCcHHHHHHHHHHh---c----C--C-CCEEEecCCCCCcHHHHHhhhc------cc
Q 016612 54 NPTRDALESLLAKLDKA-DRALCFTSGMAALAAVTHL---L----G--T-GEEIVAGDDLYGGTDRLLSRVT------PK 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~-~~~i~~~~gt~al~~~~~~---~----~--~-g~~Vlv~~~~~~~~~~~~~~~~------~~ 116 (386)
++...++.+.|.+..+. +...+++||++|+.+.+.+ . . + ..+|+.-...|++......... ..
T Consensus 81 ~~~~~~la~~L~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~~r~~ii~~~~~yHG~t~~~~s~~~~~~~~~~ 160 (408)
T PRK04612 81 SAPPLKLAEELVTASRFAEKVFLCNSGTEANEAAIKLVRKWASSQGRPADKRVIVTFRGSFHGRTLAAVTATAQPKYQEG 160 (408)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCchHHHHHHHHHHHHHHHHhhCCCCCCcEEEEECCCcCCccHHHHHhcCCcccccC
Confidence 34455666666666533 5688889999998633321 1 1 1 2468877777766532211111 00
Q ss_pred C---CcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCCCCCccccc-----HHHHHHHHHHcCCEEEEeCCCCC-CCccC-
Q 016612 117 T---GVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICD-----IRKIAEMAHAHGALLLVDNSIMS-PVLSR- 185 (386)
Q Consensus 117 ~---g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~-----l~~i~~la~~~~~~li~D~a~~~-~~~~~- 185 (386)
+ ...+..++..|++.+++.+.+ ++.+++++. .+++|.+.+ +++|.++|++||+++|+||++.. +....
T Consensus 161 ~~~~~~~~~~~~~~d~~~l~~~~~~~~~aavi~eP-~~~~gg~~~~~~~~l~~l~~l~~~~g~llI~DEv~tg~gr~G~~ 239 (408)
T PRK04612 161 YEPLPGGFRYVDFNDVEALEAAMAGGDVAAVMLEP-IQGEGGVMPAAPGFLARVRALCDQHDALLVLDEIQCGMGRTGTL 239 (408)
T ss_pred CCCCCCCceEcCCCCHHHHHHhhCCCCEEEEEECC-ccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCCch
Confidence 1 112455666799999988864 455555554 455565532 89999999999999999999862 22111
Q ss_pred --CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHH
Q 016612 186 --PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQK 263 (386)
Q Consensus 186 --~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (386)
....+.+..+.+++|.+++ |+++|++++++ ++.+.+...........++..+.++...++.+.. +...++++.
T Consensus 240 ~a~~~~~~~pdi~t~~K~l~~--G~piga~~~~~-~~~~~~~~~~~~~t~~~~p~~~aaa~a~L~~~~~--~~l~~~~~~ 314 (408)
T PRK04612 240 FAHWQEQVTPDIVTLAKALGG--GFPIGAMLAGP-KVAETMQFGAHGTTFGGNPLAAAVARVALRKLAS--PQIAANVAR 314 (408)
T ss_pred hhhhhcCCCCCEEEEcchhcC--CCceEEEEECH-HHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHH
Confidence 1122444555678999953 68899998874 4555443322222334566667666666554322 234444444
Q ss_pred HHHHHhhCC-CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 264 IAEFLASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 264 l~~~l~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
+.+++.+.- .+.. .++.+ .+.++.|.++.+.+.. ......+.+.+..+|+.+.+.
T Consensus 315 ~g~~l~~~l~~l~~-~~~~i----------~~vrg~Gl~~~i~~~~~~~~~a~~i~~~l~~~Gvlv~~~----------- 372 (408)
T PRK04612 315 QSAALRAGLEALNA-EFGVF----------AQVRGRGLMLGAVLAPAHAGQAGAILDLAAEHGLLLLQA----------- 372 (408)
T ss_pred HHHHHHHHHHHHHh-hCCCe----------eeeeccceEEEEEecCchhhHHHHHHHHHHHCCeEEeeC-----------
Confidence 444443311 0000 00111 1236778889988742 334667777887888765321
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
+.+.+|+.+. .+++++.++.++++|++
T Consensus 373 ----------------g~~~lRl~Ppl~it~eeid~~l~~l~~~l~~ 403 (408)
T PRK04612 373 ----------------GPDVLRFVPALNLTDAELADGLARLRLALAD 403 (408)
T ss_pred ----------------CCCEEEEcCCccCCHHHHHHHHHHHHHHHHH
Confidence 1244888764 48888888888888865
No 275
>COG0112 GlyA Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.71 E-value=4.8e-15 Score=131.32 Aligned_cols=206 Identities=24% Similarity=0.209 Sum_probs=145.5
Q ss_pred HHHHHHhhcCCC-ceEEeCcHHHHH-HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCC------CH
Q 016612 60 LESLLAKLDKAD-RALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTC------DL 129 (386)
Q Consensus 60 l~~~l~~~~g~~-~~i~~~~gt~al-~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~------d~ 129 (386)
..++.+++||.+ ..+-..||+.|. .+.+++++|||+|+-.+..++++..+- .-....|. +.+.++.+ |.
T Consensus 77 aierak~LFga~~anVQPhSGs~AN~av~~All~pGDtimgm~l~~GGHltHg-~~v~~sG~~~~~v~Y~vd~et~~IDy 155 (413)
T COG0112 77 AIERAKKLFGAEYANVQPHSGSQANQAVYLALLQPGDTIMGLDLSHGGHLTHG-SPVNFSGKLFNVVSYGVDPETGLIDY 155 (413)
T ss_pred HHHHHHHHhCCCccccCCCCchHHHHHHHHHHcCCCCeEecccCCCCCcccCC-CCCCccceeEEeEecccccccCccCH
Confidence 346677889999 466678899775 577889999999998887776664331 11222333 33333332 88
Q ss_pred HHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC-----CCCccCCCCCCccEEEeccccccc
Q 016612 130 DEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGADIVMHSATKFIA 203 (386)
Q Consensus 130 ~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~-----~~~~~~~~~~~~di~~~S~sK~~~ 203 (386)
|++++... .++++|+.-....+ ...|++++.++|++.|.++++|.+|- .|.+++|... +|+++.|.||+|-
T Consensus 156 D~~~k~a~e~kPK~ii~G~SaY~--r~id~~~~reIad~VGA~L~~DmAHiaGLVA~G~~p~P~~~-AdvVTtTTHKTlr 232 (413)
T COG0112 156 DEVEKLAKEVKPKLIIAGGSAYS--RPIDFKRFREIADEVGAYLMVDMAHVAGLIAGGVHPNPLPH-ADVVTTTTHKTLR 232 (413)
T ss_pred HHHHHHHHHhCCCEEEECccccc--cccCHHHHHHHHHHhCceEEehHHHHHHHHhcccCCCCCCc-cceEeCCcccCCC
Confidence 99998876 68999986544432 56799999999999999999999984 4667788875 9999999999998
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChh-----hHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHhhCC
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF-----DCWICLRGVK-TMALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
|| |+|+|.++++++.+++.........+.... .+.++..+++ .+..+..+..+|++.|.+.|.++.
T Consensus 233 GP---rGG~Il~~~eel~kkin~aVFPg~qggpl~HviAakaVa~~Eal~p~fk~Ya~qVv~NAkaLAe~l~~~G 304 (413)
T COG0112 233 GP---RGGIILTNDEELAKKINSAVFPGLQGGPLMHVIAAKAVAFKEALEPEFKEYAKQVVKNAKALAEALKERG 304 (413)
T ss_pred CC---CceEEEeccHHHHHHhhhhcCCccCCChHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHcC
Confidence 87 479999998778777765433221111111 1112222333 346777888999999999998854
No 276
>PRK09792 4-aminobutyrate transaminase; Provisional
Probab=99.71 E-value=4.8e-16 Score=147.00 Aligned_cols=318 Identities=13% Similarity=0.107 Sum_probs=180.0
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-C--CceEEeCcHHHHHHHHHHh---cCCC
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-A--DRALCFTSGMAALAAVTHL---LGTG 93 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g-~--~~~i~~~~gt~al~~~~~~---~~~g 93 (386)
...+|..+|.+.++..... .......+....++...++.+.+.++.. . +..++++||++|+.+.+.+ ....
T Consensus 51 ~~~lGh~~p~v~~ai~~ql---~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr 127 (421)
T PRK09792 51 VLNTGHRHPDLVAAVEQQL---QQFTHTAYQIVPYESYVTLAEKINALAPVSGQAKTAFFTTGAEAVENAVKIARAHTGR 127 (421)
T ss_pred hhcCCCCCHHHHHHHHHHH---HhccCcccCccCCHHHHHHHHHHHHhCCCCCCceEEEeCChHHHHHHHHHHHHHhcCC
Confidence 3446777777665422221 1111111222234556677777777763 2 4678889999998643332 3334
Q ss_pred CEEEecCCCCCcHHHHHhhhcc-----cCC-----cEEEEeCCC----------CHHHHHhhhC-----CCceEEEEeCC
Q 016612 94 EEIVAGDDLYGGTDRLLSRVTP-----KTG-----VVVKRVNTC----------DLDEVASAIG-----PWTKLVWVESP 148 (386)
Q Consensus 94 ~~Vlv~~~~~~~~~~~~~~~~~-----~~g-----~~~~~v~~~----------d~~~l~~~~~-----~~~~~v~~~~~ 148 (386)
.+|+.-...|++.......... ..+ ..+..++.. +++.+++.+. +++++|+++..
T Consensus 128 ~~ii~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv 207 (421)
T PRK09792 128 PGVIAFSGGFHGRTYMTMALTGKVAPYKIGFGPFPGSVYHVPYPSDLHGISTQDSLDAIERLFKSDIEAKQVAAIIFEPV 207 (421)
T ss_pred CeEEEECCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCcccccccHHHHHHHHHHHHHhccCCCceEEEEEccc
Confidence 5788777777665322111110 111 012223321 3467777664 46889999999
Q ss_pred CCCCcccc-c---HHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcCh
Q 016612 149 TNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 149 ~nptG~~~-~---l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
++++|... | +++|.++|++||+++|+||++.. +.... ......|+ .+++|.+++ |+++|+++++ +
T Consensus 208 q~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~G~~~a~~~~~~~pDi--~t~gK~l~~--G~pigav~~~-~ 282 (421)
T PRK09792 208 QGEGGFNVAPKELVAAIRRLCDEHGIVMIADEVQSGFARTGKLFAMDHYADKPDL--MTMAKSLAG--GMPLSGVVGN-A 282 (421)
T ss_pred cCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHhcCCCCcE--EEeehhhcC--CCceEEEEEc-H
Confidence 99999875 5 89999999999999999999763 22111 11234675 467999963 6889999986 4
Q ss_pred hHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC
Q 016612 219 RLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA 298 (386)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 298 (386)
++.+.+...........++..+.+....++.+.. +.+.++.+.+.+.+.+.-. . +. ..++. ....++.
T Consensus 283 ~i~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l~--~-l~---~~~p~----v~~vrG~ 350 (421)
T PRK09792 283 NIMDAPAPGGLGGTYAGNPLAVAAAHAVLNIIDK--ESLCERANQLGQRLKNTLI--D-AK---ESVPA----IAAVRGL 350 (421)
T ss_pred HHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHH--H-HH---HhCCC----cceeccc
Confidence 5655443222223334555566544444433321 1233333344443332110 0 00 01111 1234677
Q ss_pred CceEEEEeCCH-------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----
Q 016612 299 GSVLSFLTGSL-------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---- 367 (386)
Q Consensus 299 ~~~~~~~~~~~-------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---- 367 (386)
|.++++.+.+. .....+.+.+..+|+.+...+ ...+.||+.++.
T Consensus 351 Gl~~~ie~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~g-------------------------~~~~~irl~P~l~i~~ 405 (421)
T PRK09792 351 GSMIAAEFNDPQTGEPSAAIAQKIQQRALAQGLLLLTCG-------------------------AYGNVIRFLYPLTIPD 405 (421)
T ss_pred ceEEEEEecCCccCCcchHHHHHHHHHHHHCCcEEeecC-------------------------CCCCEEEEeCCCcCCH
Confidence 89999998533 346678888888888653211 114569999754
Q ss_pred CChHHHHHHHHHHHh
Q 016612 368 EDVNDLISDLDKALR 382 (386)
Q Consensus 368 ~~~~~~i~~l~~~l~ 382 (386)
+++++.++.+.++|+
T Consensus 406 ~ei~~~~~~l~~~l~ 420 (421)
T PRK09792 406 AQFDAAMKILQDALS 420 (421)
T ss_pred HHHHHHHHHHHHHHh
Confidence 777777777777764
No 277
>PLN02880 tyrosine decarboxylase
Probab=99.71 E-value=2.1e-15 Score=144.48 Aligned_cols=159 Identities=16% Similarity=0.150 Sum_probs=116.9
Q ss_pred chHHHHHHHHHhhcCCCc---------eEEeCcHHHHH-HHHHHh----cC-------CCCEEEecCCCCCcHHHHHhhh
Q 016612 55 PTRDALESLLAKLDKADR---------ALCFTSGMAAL-AAVTHL----LG-------TGEEIVAGDDLYGGTDRLLSRV 113 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~---------~i~~~~gt~al-~~~~~~----~~-------~g~~Vlv~~~~~~~~~~~~~~~ 113 (386)
.+-.++.+++++++|.++ .+++++||++. .++... ++ +.-.|++++..|.+.. ++
T Consensus 122 ~lE~~vi~wl~~l~g~p~~~~~~~~~gG~~tsggs~anl~al~~AR~~~~~~~g~~~~~~~vv~~S~~aH~Sv~----Ka 197 (490)
T PLN02880 122 ELEMIVLDWLAKLLNLPEQFLSTGNGGGVIQGTASEAVLVVLLAARDRVLRKVGKNALEKLVVYASDQTHSALQ----KA 197 (490)
T ss_pred HHHHHHHHHHHHHhCCCchhhcCCCCceEEcCccHHHHHHHHHHHHHHHHHHhcccccCCeEEEEcCCchHHHH----HH
Confidence 456778889999998763 57788888774 444332 21 1224667888888885 55
Q ss_pred cccCCcE---EEEeCC-------CCHHHHHhhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 114 TPKTGVV---VKRVNT-------CDLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 114 ~~~~g~~---~~~v~~-------~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
+...|+. ++.|+. .|+++|++.+.+ .+-+|+.+..+..+|.+.|+++|.++|+++|+++++|++
T Consensus 198 a~~lGlg~~~v~~Vp~d~~~~~~md~~~L~~~i~~~~~~g~~p~~vvataGTT~~GaiDpl~eI~~i~~~~~iwlHVDaA 277 (490)
T PLN02880 198 CQIAGIHPENCRLLKTDSSTNYALAPELLSEAISTDLSSGLIPFFLCATVGTTSSTAVDPLLELGKIAKSNGMWFHVDAA 277 (490)
T ss_pred HHHcCCCHHHEEEeecCCCcCCcCCHHHHHHHHHHHHHCCCccEEEEEecCCCcCcccCcHHHHHHHHHHcCCEEEEehh
Confidence 5566652 344443 288999988852 255777788889999999999999999999999999999
Q ss_pred CCCCCccCC------CC-CCccEEEeccccccccCCCceEEEEEEcChh
Q 016612 178 IMSPVLSRP------LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 178 ~~~~~~~~~------~~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~ 219 (386)
|+.+....+ .. .++|.++.++|||+..|.+ +|++++++..
T Consensus 278 ~gg~~~~~~~~~~~l~gie~aDSit~d~HKwl~~P~~--~g~llvr~~~ 324 (490)
T PLN02880 278 YAGSACICPEYRHYIDGVEEADSFNMNAHKWFLTNFD--CSLLWVKDRN 324 (490)
T ss_pred hHHHHHhCHHHHHHhcCchhcCEEEECchhhcCCCcc--EEEEEEeCHH
Confidence 987654321 12 3689999999999998887 8999988643
No 278
>KOG2862 consensus Alanine-glyoxylate aminotransferase AGT1 [General function prediction only]
Probab=99.70 E-value=1.9e-15 Score=129.09 Aligned_cols=161 Identities=20% Similarity=0.242 Sum_probs=129.7
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 56 TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
+.+++.+-+...|... ..++.++|+.++. ++..++.|||.|++-..+-.+.. +..+++++|+++..++.+
T Consensus 51 Im~~v~egikyVFkT~n~~tf~isgsGh~g~E~al~N~lePgd~vLv~~~G~wg~r--a~D~~~r~ga~V~~v~~~~G~~ 128 (385)
T KOG2862|consen 51 IMDEVLEGIKYVFKTANAQTFVISGSGHSGWEAALVNLLEPGDNVLVVSTGTWGQR--AADCARRYGAEVDVVEADIGQA 128 (385)
T ss_pred HHHHHHHHHHHHhccCCCceEEEecCCcchHHHHHHhhcCCCCeEEEEEechHHHH--HHHHHHhhCceeeEEecCcccC
Confidence 5677777777777654 4677788899997 45568999999997655433332 347889999999999765
Q ss_pred -CHHHHHhhhC-CCceEEEEeCCCCCCccccc-HHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 -DLDEVASAIG-PWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 -d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~-l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
.++++++++. .+++++++++....||...| ++.+.++||+|+.++++|.+.+.|..+ ...+++.|+......|.++
T Consensus 129 ~~le~i~~~lsqh~p~~vfv~hgdsSTgV~q~~~~~~g~lc~k~~~lllVD~VaSlggt~F~mDewgVDvaytgSQKaL~ 208 (385)
T KOG2862|consen 129 VPLEEITEKLSQHKPKAVFVTHGDSSTGVLQDLLAISGELCHKHEALLLVDTVASLGGTEFEMDEWGVDVAYTGSQKALG 208 (385)
T ss_pred ccHHHHHHHHHhcCCceEEEEecCccccccchHHHHHHHHhhcCCeEEEEechhhcCCccceehhhcccEEEecchhhcC
Confidence 7889998886 68899999999999999999 788899999999999999998876643 4667899999999999999
Q ss_pred cCCCceEEEEEEcChhH
Q 016612 204 GHSDVMAGVLAVKGERL 220 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~ 220 (386)
+|+|+ +.+..+++.+
T Consensus 209 aP~GL--siisfS~ka~ 223 (385)
T KOG2862|consen 209 APAGL--SIISFSDKAL 223 (385)
T ss_pred CCCCc--ceeecCHHHH
Confidence 99995 6676665433
No 279
>PLN02590 probable tyrosine decarboxylase
Probab=99.70 E-value=1.5e-15 Score=145.54 Aligned_cols=284 Identities=15% Similarity=0.161 Sum_probs=177.3
Q ss_pred chHHHHHHHHHhhcCCCc---------eEEeCcHHHHH-HHHHHh----cC-------CCCEEEecCCCCCcHHHHHhhh
Q 016612 55 PTRDALESLLAKLDKADR---------ALCFTSGMAAL-AAVTHL----LG-------TGEEIVAGDDLYGGTDRLLSRV 113 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~---------~i~~~~gt~al-~~~~~~----~~-------~g~~Vlv~~~~~~~~~~~~~~~ 113 (386)
.+-.++.+++++++|.++ .+++++||+|. .++.+. ++ +.-.|++++..|.++. +.
T Consensus 170 ~lE~~vi~wl~~l~glp~~~~~~~~~gG~~~sGgSeAnl~al~aAR~~~~~~~g~~~~~~~vvy~S~~aH~Sv~----KA 245 (539)
T PLN02590 170 ELEIIVLDWLAKLLQLPDHFLSTGNGGGVIQGTGCEAVLVVVLAARDRILKKVGKTLLPQLVVYGSDQTHSSFR----KA 245 (539)
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCceEEcCchHHHHHHHHHHHHHHHHhhhcccCCCCEEEEecCCchHHHH----HH
Confidence 356677889999988653 57788888774 444331 11 2225567888888875 55
Q ss_pred cccCCc---EEEEeCCC-------CHHHHHhhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 114 TPKTGV---VVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 114 ~~~~g~---~~~~v~~~-------d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
+...|+ .++.++.+ |+++|++++.+ .+-+|+.+..+..+|.+.|+++|.++|++||++++||++
T Consensus 246 a~ilGlg~~~vr~Vp~d~~~~~~md~~~L~~~I~~d~~~g~~P~~VvaTaGTT~tGaiDpl~~Ia~i~~~~g~WlHVDaA 325 (539)
T PLN02590 246 CLIGGIHEENIRLLKTDSSTNYGMPPESLEEAISHDLAKGFIPFFICATVGTTSSAAVDPLVPLGNIAKKYGIWLHVDAA 325 (539)
T ss_pred HHHcCCCcccEEEEeCCCCCCCcCCHHHHHHHHHHHHhcCCCcEEEEEEeCCCCCcccCCHHHHHHHHHHhCCeEEEecc
Confidence 555555 34444432 89999988853 355777788888999999999999999999999999999
Q ss_pred CCCCCccCCC----C---CCccEEEeccccccccCCCceEEEEEEcChhH-HHHH----HHhhh----------------
Q 016612 178 IMSPVLSRPL----E---LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKEL----YFLQN---------------- 229 (386)
Q Consensus 178 ~~~~~~~~~~----~---~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~-~~~~----~~~~~---------------- 229 (386)
|+......+. . ..+|-++.++|||+..|.+ +|+++++++.. .+.+ ..+..
T Consensus 326 ~GG~al~~~~~r~~~~Gie~ADSit~D~HK~l~~p~~--cg~llvr~~~~l~~a~~~~~~YL~~~~~~~~~~~d~~d~~i 403 (539)
T PLN02590 326 YAGNACICPEYRKFIDGIENADSFNMNAHKWLFANQT--CSPLWVKDRYSLIDALKTNPEYLEFKVSKKDTVVNYKDWQI 403 (539)
T ss_pred hhhhhhcChhhHHHhcCCccCCEEEECchhhcCcCcC--EEEEEecCHHHHHHHhhcCHHHhCCcccccccCCCccccCC
Confidence 9866543221 1 2479999999999988776 89988887532 2211 11110
Q ss_pred hcCCCCChhhHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC
Q 016612 230 AEGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 307 (386)
Q Consensus 230 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 307 (386)
..+........|+.++ +.+.+..++++..+.++.+.+.+++.+.++-+. +..-++++|...
T Consensus 404 ~lsRr~raLklW~~lr~~G~~G~~~~i~~~~~lA~~~~~~l~~~~~fel~~-----------------~~~l~iVcFr~~ 466 (539)
T PLN02590 404 SLSRRFRSLKLWMVLRLYGSENLRNFIRDHVNLAKHFEDYVAQDPSFEVVT-----------------TRYFSLVCFRLA 466 (539)
T ss_pred CCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCeEEec-----------------CCceEEEEEEec
Confidence 0111223344455444 344567777777788888888887765431111 112367788763
Q ss_pred C--------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHH
Q 016612 308 S--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLI 374 (386)
Q Consensus 308 ~--------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i 374 (386)
. .....++.+++...|...-. +... -+.-++|++++ .++++.++
T Consensus 467 ~~~~~~~~~~~ln~~l~~~l~~~G~~~vs---------~t~~--------------~g~~~lR~~i~n~~T~~~dv~~~~ 523 (539)
T PLN02590 467 PVDGDEDQCNERNRELLAAVNSTGKIFIS---------HTAL--------------SGKFVLRFAVGAPLTEEKHVTEAW 523 (539)
T ss_pred CCCCCHHHHHHHHHHHHHHHHhCCCEEEE---------eeEE--------------CCEEEEEEEecCCCCCHHHHHHHH
Confidence 2 12234555555444432110 0000 02345999984 37777777
Q ss_pred HHHHHHHhcC
Q 016612 375 SDLDKALRTG 384 (386)
Q Consensus 375 ~~l~~~l~~~ 384 (386)
+.|.+..+++
T Consensus 524 ~~i~~~a~~~ 533 (539)
T PLN02590 524 QIIQKHASKF 533 (539)
T ss_pred HHHHHHHHHh
Confidence 7777765543
No 280
>TIGR00700 GABAtrnsam 4-aminobutyrate aminotransferase, prokaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.70 E-value=7.2e-16 Score=146.08 Aligned_cols=318 Identities=13% Similarity=0.125 Sum_probs=178.8
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC-C--CceEEeCcHHHHHHHHHH---hcCCC
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK-A--DRALCFTSGMAALAAVTH---LLGTG 93 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g-~--~~~i~~~~gt~al~~~~~---~~~~g 93 (386)
...+|..+|.+.++..... .......+....++...++.+.|.++.. . +...+++||++|+.+.+. .....
T Consensus 44 ~~~lGh~~p~v~~a~~~ql---~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr 120 (420)
T TIGR00700 44 VLNIGHSHPRVVDAVRTQV---AEFTHTCFMVTPYEGYVALAEKLNRIAPGSGPKKSVFFNSGAEAVENAVKIARSYTGR 120 (420)
T ss_pred hccCCCCCHHHHHHHHHHH---HhccCccccccCChHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhcCC
Confidence 3446777777665422211 1111111222234556677777777763 2 467888999999864333 23344
Q ss_pred CEEEecCCCCCcHHHHHhhhcc-----cCC-----cEEEEeCCC----------------CHHHHHhhh-----CCCceE
Q 016612 94 EEIVAGDDLYGGTDRLLSRVTP-----KTG-----VVVKRVNTC----------------DLDEVASAI-----GPWTKL 142 (386)
Q Consensus 94 ~~Vlv~~~~~~~~~~~~~~~~~-----~~g-----~~~~~v~~~----------------d~~~l~~~~-----~~~~~~ 142 (386)
.+|+.-..+|++.......+.. ..+ -.+..++.. +++.+++.+ .+++.+
T Consensus 121 ~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAa 200 (420)
T TIGR00700 121 PGVVAFDHGFHGRTNMTMALTAKVMPYKSGFGPFAPEVYRAPLPYPYRDGLLDKQLSTDGELAAARAIFVIDVGANNVAA 200 (420)
T ss_pred CcEEEECCCcCCCcHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccchhHHHHHHHHHHHHHhhcCCCcEEE
Confidence 5677667777665322112111 111 112222221 144566554 257899
Q ss_pred EEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCC-Ccc-----CCCCCCccEEEeccccccccCCCceEEE
Q 016612 143 VWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-VLS-----RPLELGADIVMHSATKFIAGHSDVMAGV 212 (386)
Q Consensus 143 v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~-~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~ 212 (386)
|+++.....+|.+.+ +++|.++|++||+++|+||++... ... .......|++ +++|.++ +|+++|+
T Consensus 201 vi~Epi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tg~gr~g~~~a~~~~~~~pDi~--~lsK~l~--~G~pig~ 276 (420)
T TIGR00700 201 LVIEPVQGEGGFIVPAKGFVPALLDWCREHGIVFIADEVQTGFARTGAMFACEHEGPEPDLI--TTAKSLA--DGLPLSG 276 (420)
T ss_pred EEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEEecccCCcccchhHHHhhcCCCCCEE--Eeecccc--CCcceEE
Confidence 999998888888775 899999999999999999998632 111 1122346765 4899995 4689999
Q ss_pred EEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhh
Q 016612 213 LAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 292 (386)
Q Consensus 213 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~ 292 (386)
++++ +++.+.+.........+.++..++++...++.+. .+...++.+.+.+.+.+.-. . + ...++..
T Consensus 277 v~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~--~~~~~~~~~~~g~~l~~~L~--~-l---~~~~~~~---- 343 (420)
T TIGR00700 277 VTGR-AEIMDAPAPGGLGGTYAGNPLACAAALAVLAIIE--SEGLIERARQIGRLVTDRLT--T-L---KAVDPRI---- 343 (420)
T ss_pred EEec-HHHHhhcCCCCcCCCCCcCHHHHHHHHHHHHHHH--hccHHHHHHHHHHHHHHHHH--H-H---HhhCCCE----
Confidence 9987 4565544322233333555666666544443221 12233333333333322110 0 0 0001110
Q ss_pred hccCCCCceEEEEeC-------CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe
Q 016612 293 SQAKGAGSVLSFLTG-------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 365 (386)
Q Consensus 293 ~~~~~~~~~~~~~~~-------~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 365 (386)
...++.|.++++.+. +.....++.+.+...|+.+.++..+ .+++|+++
T Consensus 344 ~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~p~~~f-------------------------~~~lRl~p 398 (420)
T TIGR00700 344 GDVRGLGAMIAVELVDPGTTEPDAGLAERIATAAHAAGLLLLTCGMF-------------------------GNIIRFLP 398 (420)
T ss_pred EEeeccceEEEEEEecCCCCCccHHHHHHHHHHHHHCCeEEeccCCC-------------------------CCEEEEEC
Confidence 112456888888762 2345677887777888876654321 24599997
Q ss_pred c----cCChHHHHHHHHHHHh
Q 016612 366 G----IEDVNDLISDLDKALR 382 (386)
Q Consensus 366 ~----~~~~~~~i~~l~~~l~ 382 (386)
+ .+++++.++.+.++|+
T Consensus 399 ~l~~~~~~l~~~~~~l~~~l~ 419 (420)
T TIGR00700 399 PLTIGDELLSEGLDILCAILA 419 (420)
T ss_pred CCCcCHHHHHHHHHHHHHHhh
Confidence 5 3677777777777764
No 281
>PRK04260 acetylornithine aminotransferase; Provisional
Probab=99.70 E-value=3.4e-15 Score=139.84 Aligned_cols=233 Identities=18% Similarity=0.183 Sum_probs=137.8
Q ss_pred eEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcH-HHHHhhhc------ccCCc---EEEEeCCCCHHHHHhhhCCC
Q 016612 73 ALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGT-DRLLSRVT------PKTGV---VVKRVNTCDLDEVASAIGPW 139 (386)
Q Consensus 73 ~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~-~~~~~~~~------~~~g~---~~~~v~~~d~~~l~~~~~~~ 139 (386)
.++++||+++..+.+.+ ..++++|++.+..|++. ...+ ... +.++. .+...+..|++++++.++++
T Consensus 87 ~~~~~SGseA~~~Al~~ar~~~~~~~vv~~~~~yHg~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~dl~~l~~~l~~~ 165 (375)
T PRK04260 87 AFFCNSGAEANEAAIKIARKATGKQEIITFQNSFHGRTFGSM-SATGQDKIKDGFGDGVPHFSYAIFNDLNSVKALVNKN 165 (375)
T ss_pred EEEcCccHHHHHHHHHHHHHhcCCCeEEEECCCcCcccHHHH-hccCCcccCCCCCCCCCCeEEeCCCCHHHHHHhcCCC
Confidence 46778899887643332 34567888887777653 2221 111 11111 12223345899999988888
Q ss_pred ceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCccCC-----CCCCccEEEeccccccccCCCce
Q 016612 140 TKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAGHSDVM 209 (386)
Q Consensus 140 ~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~~-----~~~~~di~~~S~sK~~~g~~g~~ 209 (386)
+.+|++++++|++|.+.+ +++|.++|+++|+++|+||++.. +..... .....|++ |+||.++ + |++
T Consensus 166 ~a~vi~e~v~~~~G~~~~~~~~l~~~~~l~~~~~~~~i~De~~~g~g~~g~~~~~~~~~~~pdi~--t~sK~l~-~-G~~ 241 (375)
T PRK04260 166 TAAVMLELVQGESGVLPADKDFVKALADYCQETGILLIVDEVQTGMGRTGKLYAFEHYGIEPDIF--TLAKGLA-N-GVP 241 (375)
T ss_pred eEEEEECCeECCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhHhhCCCCCEE--Eeccccc-C-Ccc
Confidence 899999999999998865 89999999999999999999852 111111 12345654 7899985 3 578
Q ss_pred EEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCc
Q 016612 210 AGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPG 287 (386)
Q Consensus 210 ~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~ 287 (386)
+|++++++ ++.+.+.........+.++..+.++...++.+. ...++..+..+.+.+.+.+.. ...+.
T Consensus 242 ig~~~~~~-~~~~~~~~~~~~~t~~~~~~~~~aa~a~l~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~ 310 (375)
T PRK04260 242 VGAMLAKS-SLGGAFGYGSHGSTFGGNKLSMAAASATLDIMLTAGFLEQALENGNYLQEQLQKAL----------QDKET 310 (375)
T ss_pred eEEEEEcH-HHHhhcCCCCCCCCCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----------hhCCC
Confidence 99999974 454444322222223445666655555543322 222333334444444443321 11110
Q ss_pred hhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccC
Q 016612 288 HELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 327 (386)
Q Consensus 288 ~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~ 327 (386)
. ...++.|.++++.+.. ...++.+.+...|+.+.
T Consensus 311 ~----~~~~~~g~~~~~~~~~--~~~~~~~~l~~~Gi~v~ 344 (375)
T PRK04260 311 V----TTVRGLGYMIGIETTA--DLSQLVEAARDKGLIVL 344 (375)
T ss_pred e----eEEeccceEEEEEecC--cHHHHHHHHHhCCCEEe
Confidence 0 0113457888888732 24567777777787653
No 282
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.69 E-value=2.5e-15 Score=152.65 Aligned_cols=158 Identities=23% Similarity=0.253 Sum_probs=119.6
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHH-HHHHHh----cCCCC----EEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AAL-AAVTHL----LGTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al-~~~~~~----~~~g~----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
...++++++++++|.++.-+..+|+ +|. ..+++. .++|+ +|++++..|++.. ..+...|++++.++
T Consensus 543 ~i~e~q~~l~eltG~d~~sl~~~~ga~ge~agL~a~r~~~~~~G~~~r~~vlis~~aH~snp----~sa~~~G~~vv~v~ 618 (954)
T PRK05367 543 LIDQLEAWLAEITGYDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRDVCLIPSSAHGTNP----ASAVMAGMKVVVVA 618 (954)
T ss_pred HHHHHHHHHHHHHCCCCEEECccHHHHHHHHHHHHHHHHhhccCCCCCCEEEEEchhhhhhH----HHHHHCCCEEEEEC
Confidence 5778899999999999766666554 554 333232 35565 5999999998886 34567799999988
Q ss_pred CC-----CHHHHHhhhCC---CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC--ccCCCCCCccEEE
Q 016612 126 TC-----DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVM 195 (386)
Q Consensus 126 ~~-----d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~~di~~ 195 (386)
.+ |+++|++++++ ++.+|++++|++..+...|+++|+++||++|+++++|.++..+. +..+...|+|+++
T Consensus 619 ~d~~G~iD~~~L~~~i~~~~~~la~V~it~pst~G~~e~~I~eI~~i~h~~G~~v~VDgA~~~al~~l~~pg~~GADi~~ 698 (954)
T PRK05367 619 CDENGNIDLDDLRAKAEEHADNLAAIMITYPSTHGVFEETIREICEIVHEHGGQVYLDGANMNAQVGLARPGDIGADVSH 698 (954)
T ss_pred CCCCCCcCHHHHHHHHhccCCCeEEEEEEcCCCCeeecCCHHHHHHHHHHcCCEEEEECcChhhccCCCChhhcCCCEEE
Confidence 64 88999998864 57788889998863334789999999999999999999997543 3356678999999
Q ss_pred eccccccccCCCc---eEEEEEEcC
Q 016612 196 HSATKFIAGHSDV---MAGVLAVKG 217 (386)
Q Consensus 196 ~S~sK~~~g~~g~---~~G~i~~~~ 217 (386)
+|+||||+.|.|. -.|++++++
T Consensus 699 ~s~HK~f~~P~G~GGPg~G~l~vr~ 723 (954)
T PRK05367 699 LNLHKTFCIPHGGGGPGVGPIGVKA 723 (954)
T ss_pred ecCcccCCCCcCCCCCceEEEeecc
Confidence 9999998543321 157888863
No 283
>PRK04013 argD acetylornithine/acetyl-lysine aminotransferase; Provisional
Probab=99.69 E-value=1.3e-15 Score=140.46 Aligned_cols=302 Identities=14% Similarity=0.116 Sum_probs=191.4
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh---cCCCCEE
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL---LGTGEEI 96 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~---~~~g~~V 96 (386)
...+|..+|++.++......+. .+......++...++++.++++.+.+..++++||++|+.+.+.+ ....++|
T Consensus 35 ~~~lGh~~p~v~~ai~~ql~~~----~~~~~~~~~~~~~~la~~l~~~~~~~~v~~~~SGseA~e~Alklar~~~gr~~I 110 (364)
T PRK04013 35 VNVLGHNHPEWVEEMSEQLEKL----VVAGPMFEHEEKEEMLEELSKWVNYEYVYMGNSGTEAVEAALKFARLYTGRKEI 110 (364)
T ss_pred hccCCCCCHHHHHHHHHHHHhc----CCccCCcCCHHHHHHHHHHHhhcCCCEEEEeCchHHHHHHHHHHHHHHhCCCEE
Confidence 4568888888876532221111 11111124567888999999998878889999999998744332 2333789
Q ss_pred EecCCCCCcHHHHHhhh---------cccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccc-c---HHHHHH
Q 016612 97 VAGDDLYGGTDRLLSRV---------TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC-D---IRKIAE 163 (386)
Q Consensus 97 lv~~~~~~~~~~~~~~~---------~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~-~---l~~i~~ 163 (386)
++.+.+|++........ ....-..+..++..|.+++++.+++++++|++++.....|... | +++|.+
T Consensus 111 i~~~~syHG~t~~~ls~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~i~~~~aAvivEpi~g~gG~~~~~~~yl~~lr~ 190 (364)
T PRK04013 111 IAMTNAFHGRTMGALSATWKPKYREDFEPLVPGFKHIPFNDVEAAKEAITKETAAVIFEPIQGEGGIVPAKEEFVKTLRD 190 (364)
T ss_pred EEECCccccCchhhccCCCCcccccCCCCCCCCcEEecCCCHHHHHHHhcCCcEEEEEcCCcCCCCCcCCCHHHHHHHHH
Confidence 98888787753221111 0111123455666789999999988999999999888777665 4 999999
Q ss_pred HHHHcCCEEEEeCCCCC---CCcc--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChh
Q 016612 164 MAHAHGALLLVDNSIMS---PVLS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPF 238 (386)
Q Consensus 164 la~~~~~~li~D~a~~~---~~~~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (386)
+|++||+++|+||+++. |.+. ......+|+++. +|.+++ |+.++.++.+.+ +. ........+.++.
T Consensus 191 lc~~~gillI~DEv~tG~RtG~~~a~~~~gv~PDiv~~--gK~lgg--G~P~~a~~~~~~-~~----~~~~~~T~~gnp~ 261 (364)
T PRK04013 191 LTEDVGALLIADEVQSGLRTGKFLAIEHYKVEPDIVTM--GKGIGN--GVPVSLTLTNFD-VE----RGKHGSTFGGNPL 261 (364)
T ss_pred HHHHcCCEEEEechhhcCCCCchhHHHhcCCCCCEEEe--cccccC--CceeEEEEeccc-cc----CCCcCCCCCcCHH
Confidence 99999999999999762 2221 122346788864 999975 466777777643 31 1122233456666
Q ss_pred hHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhh
Q 016612 239 DCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVET 318 (386)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 318 (386)
..++....++.+.. +.+.++++.. +.+.. .+.+ .+.++.|.++.+++..+ ...+.+.
T Consensus 262 ~~aaa~a~l~~i~~--~~l~~~~~~~---l~~l~------~~~v----------~~vRG~Gl~~gve~~~~--~~~i~~~ 318 (364)
T PRK04013 262 ACKAVAVTLRILRR--ERLVEKAGEK---FIEIK------GERV----------VTTRGRGLMIGIVLKKP--VGKYVEE 318 (364)
T ss_pred HHHHHHHHHHHHHh--ccHHHHHHHH---HHHhc------cCcc----------eeeeeCcEEEEEEeCCc--HHHHHHH
Confidence 67666665554432 2344444433 22211 0111 12377899999998543 4567777
Q ss_pred cCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhcC
Q 016612 319 TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 319 l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~~ 384 (386)
+..+|+.+...+ .+.+|+.+ +.++++++++.|.+++++.
T Consensus 319 ~~~~Gll~~~~g---------------------------~~vlr~~Ppl~it~~~i~~~~~~l~~~l~~~ 361 (364)
T PRK04013 319 LQNRGYLVHTAG---------------------------QRVIRLLPPLIISKDTMEEAKSAIEGVINDI 361 (364)
T ss_pred HHhCCcEEeeCC---------------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHHHH
Confidence 777777653211 23477776 4588999999999988764
No 284
>TIGR03799 NOD_PanD_pyr putative pyridoxal-dependent aspartate 1-decarboxylase. This enzyme is proposed here to be a form of aspartate 1-decarboxylase, pyridoxal-dependent, that represents a non-orthologous displacement to the more widely distributed pyruvoyl-dependent form (TIGR00223). Aspartate 1-decarboxylase makes beta-alanine, used usually in pathothenate biosynthesis, by decarboxylation from asparatate. A number of species with the PanB and PanC enzymes, however, lack PanD. This protein family occurs in a number of Proteobacteria that lack PanD. This enzyme family appears to be a pyridoxal-dependent enzyme (see pfam00282). The family was identified by Partial Phylogenetic Profiling; members in Geobacter sulfurreducens, G. metallireducens, and Pseudoalteromonas atlantica are clustered with the genes for PanB and PanC. We suggest the gene symbol panP (panthothenate biosynthesis enzyme, Pyridoxal-dependent).
Probab=99.69 E-value=8.6e-15 Score=140.52 Aligned_cols=214 Identities=18% Similarity=0.183 Sum_probs=138.7
Q ss_pred CchHHHHHHHHHhhcCC-------------C--ceEEeCcHHHH-HHHHHH----hcC----------------------
Q 016612 54 NPTRDALESLLAKLDKA-------------D--RALCFTSGMAA-LAAVTH----LLG---------------------- 91 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~-------------~--~~i~~~~gt~a-l~~~~~----~~~---------------------- 91 (386)
..+-.++.++++++++. + ..+++++||+| +.++.. .+.
T Consensus 128 t~lE~~v~~wl~~l~~~~~~~~~~~~~~~~~~~~G~~tsGGS~ANl~Al~~AR~~~~~~~~~~~~~~~~gl~~~~~~~~~ 207 (522)
T TIGR03799 128 TPLERQVLGMMHHLVYGQDDDFYRKWMHSADHSLGAFCSGGTVANITALWVARNRLLKADGDFKGVAREGLFAALKHYGY 207 (522)
T ss_pred HHHHHHHHHHHHHHhccCcccchhhcccCCCCCCeEEcCchHHHHHHHHHHHHHHhccccccccccccccchhhhhhccC
Confidence 34566677788777641 1 25778888966 444433 121
Q ss_pred CCCEEEecCCCCCcHHHHHhhhcccCCc---EEEEeCCC-----CHHHHHhhhC----CCceEEEEe--CCCCCCccccc
Q 016612 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIG----PWTKLVWVE--SPTNPRQQICD 157 (386)
Q Consensus 92 ~g~~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~~~----~~~~~v~~~--~~~nptG~~~~ 157 (386)
++..|++++..|.+.. +.++..|+ .++.++.+ |+++|++.++ ++++.+.+. ..++.+|.+.|
T Consensus 208 ~~~~v~~S~~~H~S~~----kaa~~lglg~~~v~~vp~d~~g~~d~~~L~~~i~~~~~~g~~~~~vvataGtt~tGaiDp 283 (522)
T TIGR03799 208 DGLAILVSERGHYSLG----KAADVLGIGRDNLIAIKTDANNRIDVDALRDKCAELAEQNIKPLAIVGVAGTTETGNIDP 283 (522)
T ss_pred CceEEEECCCchHHHH----HHHHHcCCCcccEEEEEeCCCCcCCHHHHHHHHHHHHHCCCCcEEEEEEecCcCCCCcCC
Confidence 2357889999998886 44444555 56666653 8999998875 455555554 56778999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCccCC------CC-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh---
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRP------LE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--- 227 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~~~------~~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~--- 227 (386)
+++|+++|+++|+++++|.+|+.+....+ .. .++|.++.|.|||+.+|.| +|+++.+++.+.+.+...
T Consensus 284 l~eIa~i~~~~g~~lHVDaA~gg~~~~~~~~r~~l~gle~aDSit~d~HK~l~~P~g--~G~llvr~~~~~~~~~~~~~Y 361 (522)
T TIGR03799 284 LDEMADIAQELGCHFHVDAAWGGATLLSNTYRHLLKGIERADSVTIDAHKQLYVPMG--AGMVLFKDPALMSAIEHHAEY 361 (522)
T ss_pred HHHHHHHHHHcCCeEEEEchhhhHHHhCHHHHHHhcCchhCCEEEEChhhcCCcCcc--cEEEEEeCHHHHHHhccCcch
Confidence 99999999999999999999987654322 22 2689999999999989988 799988876554433221
Q ss_pred -hhh-----------cCCCCChhhHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHhhCCC
Q 016612 228 -QNA-----------EGSGLAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 228 -~~~-----------~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
... .+........|+.++.+ ..+....++..+.++.+.+.+++.+.
T Consensus 362 l~~~~~~d~~~~~legsR~~~al~lw~aL~~lG~~G~~~ii~~~~~la~~l~~~L~~~~~ 421 (522)
T TIGR03799 362 ILRKGSKDLGSHTLEGSRPGMAMLVYAGLHIIGRKGYELLIDQSIEKAKYFADLIQQQPD 421 (522)
T ss_pred hcCCCCCccccceeecCcchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 000 00111112233333322 33455555566666777777766653
No 285
>PRK06777 4-aminobutyrate aminotransferase; Provisional
Probab=99.69 E-value=1.1e-15 Score=144.48 Aligned_cols=315 Identities=11% Similarity=0.092 Sum_probs=179.0
Q ss_pred CCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEeCcHHHHHHHHHH---hcCCCC
Q 016612 21 DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTH---LLGTGE 94 (386)
Q Consensus 21 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~~~~---~~~~g~ 94 (386)
..+|.-+|.+.++..... .+.....+....++...++.+.+.++.. .+...+++||++|+.+.+. ......
T Consensus 52 ~~lGh~~p~v~~ai~~ql---~~~~~~~~~~~~~~~~~~la~~l~~~~p~~~~~~~~f~~sGseA~e~AlklAr~~tgr~ 128 (421)
T PRK06777 52 LNTGHRHPKVVAAVRQQL---DQFTHTAYQIVPYASYVTLAERINALAPIDGPAKTAFFTTGAEAVENAVKIARAYTGRP 128 (421)
T ss_pred hccCCCCHHHHHHHHHHH---hhcccccccccCChHHHHHHHHHHHhCCCCCCceEEEeCCcHHHHHHHHHHHHHhhCCC
Confidence 446777777665422211 1111111222234556677777777764 2468888999999864333 233345
Q ss_pred EEEecCCCCCcHHHHHhhhccc-------CC---cEEEEeCCC----------CHHHHHhhhC-----CCceEEEEeCCC
Q 016612 95 EIVAGDDLYGGTDRLLSRVTPK-------TG---VVVKRVNTC----------DLDEVASAIG-----PWTKLVWVESPT 149 (386)
Q Consensus 95 ~Vlv~~~~~~~~~~~~~~~~~~-------~g---~~~~~v~~~----------d~~~l~~~~~-----~~~~~v~~~~~~ 149 (386)
+|+.-+..|++.......+... ++ ..+..++.. +++.+++.+. +++.+|+++...
T Consensus 129 ~ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~iaavi~Epv~ 208 (421)
T PRK06777 129 GVIAFGGAFHGRTLLTMALTGKVAPYKVGFGPFPGSIFHALYPNELHGVSVEEALSSVERLFKADIAPDQVAAILLEPIQ 208 (421)
T ss_pred eEEEEcCCcCCccHHHHhhcCCCcccccCCCCCCCCcEEcCCCccccCcCHHHHHHHHHHHHHhccCCCceEEEEECCcc
Confidence 6777777776653221111110 00 011222211 2556776653 468899999998
Q ss_pred CCCccc-cc---HHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChh
Q 016612 150 NPRQQI-CD---IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 150 nptG~~-~~---l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~ 219 (386)
+..|.. .| +++|.++|++||+++|+||++.. +.... ......|++ +++|.++ +|+++|+++++ ++
T Consensus 209 ~~~G~~~~~~~~l~~l~~lc~~~g~llI~DEv~tg~gr~g~~~~~~~~~~~pDiv--~~sK~l~--~G~pigav~~~-~~ 283 (421)
T PRK06777 209 GEGGFNVAPPEFMSALRTLCDEHGILLIADEVQTGFARTGKLFAMEYYDVKPDLI--TMAKSLG--GGMPISAVVGR-AE 283 (421)
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCccCCchhhhhhcCCCCCEE--eeehhhc--CCCceEEEEEc-HH
Confidence 888865 34 89999999999999999999862 11111 112246766 5899995 46899999987 55
Q ss_pred HHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCC
Q 016612 220 LAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 297 (386)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 297 (386)
+.+.+.........+.++..+.++...++.+.. ..++..+..+.+.+.|++... ..+.+ ...++
T Consensus 284 i~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~i----------~~vrg 349 (421)
T PRK06777 284 VMDAPAPGGLGGTYAGNPLAVAAALAVLDVIAEEKLCQRALILGAHLVEVLEKAKA----SCPAI----------VDIRA 349 (421)
T ss_pred HHhccCCCCCCCCCCcCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH----hCCCe----------EEecC
Confidence 655443332323334566666666666543322 122222333333333332210 00111 12256
Q ss_pred CCceEEEEeCC-------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----
Q 016612 298 AGSVLSFLTGS-------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---- 366 (386)
Q Consensus 298 ~~~~~~~~~~~-------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---- 366 (386)
.|.++.+.+.. ......+.+++...|+.+.++.. ..+++|+++.
T Consensus 350 ~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~Gv~i~~~~~-------------------------~g~~lr~~ppl~i~ 404 (421)
T PRK06777 350 RGSMVAVEFNDPQTGKPSPEFTRQYQRQALEEGLLLLSCGV-------------------------HGNVIRFLYPLTIP 404 (421)
T ss_pred ceEEEEEEEecCccCCccHHHHHHHHHHHHhCCeEEeecCC-------------------------CCCEEEEeCCCCCC
Confidence 78888876632 23466677777777887665432 1245999885
Q ss_pred cCChHHHHHHHHHHHh
Q 016612 367 IEDVNDLISDLDKALR 382 (386)
Q Consensus 367 ~~~~~~~i~~l~~~l~ 382 (386)
.+++++.++.|.++|.
T Consensus 405 ~~~i~~~~~~l~~~l~ 420 (421)
T PRK06777 405 DAQFSKALNILTRLLA 420 (421)
T ss_pred HHHHHHHHHHHHHHHh
Confidence 4788888888887764
No 286
>TIGR03372 putres_am_tran putrescine aminotransferase. Members of this family are putrescine aminotransferase, as found in Escherichia coli, Erwinia carotovora subsp. atroseptica, and closely related species. This pyridoxal phosphate enzyme, as characterized in E. coli, can act also on cadaverine and, more weakly, spermidine.
Probab=99.69 E-value=4.3e-15 Score=140.27 Aligned_cols=287 Identities=16% Similarity=0.178 Sum_probs=168.6
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---c---
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---L--- 90 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~--- 90 (386)
...+|..+|.+.++........ .+ .+.. .++...++.+.|.+.+.. +...+++||++|+.+.+.+ .
T Consensus 86 ~~~lGh~hp~v~~Av~~ql~~l----~~-~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~t~~ 160 (442)
T TIGR03372 86 IFNVGHRNPNVIAAVENQLAKQ----PL-HSQELLDPLRALLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSP 160 (442)
T ss_pred hhhcCCCCHHHHHHHHHHHHhC----CC-cccccCCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHhh
Confidence 4457888888776433221111 11 1222 356677788888887654 3567789999998643332 2
Q ss_pred CCCCEEEecCCCCCcHHHHHhhhc------cc---CCcEEEEeCCCCHHHHHhhhC------CCceEEEEeCCCCCCccc
Q 016612 91 GTGEEIVAGDDLYGGTDRLLSRVT------PK---TGVVVKRVNTCDLDEVASAIG------PWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 91 ~~g~~Vlv~~~~~~~~~~~~~~~~------~~---~g~~~~~v~~~d~~~l~~~~~------~~~~~v~~~~~~nptG~~ 155 (386)
+.+..|++.+..|++.......+. +. ....+..++..|.+++++.+. +++.+|+++......|.+
T Consensus 161 ~gr~~ii~~~~~yHG~t~~~ls~t~~~~~~~~~~p~~~~~~~~p~~d~~~~~~~l~~~~~~~~~vAavIvEpv~g~gG~~ 240 (442)
T TIGR03372 161 RGKFTFIAASGAFHGKSLGALSATAKPAFRKPFMPLLPGFHHVAFGDIEAMLKALNECKKTGDDVAAIILEPIQGEGGVI 240 (442)
T ss_pred cCCcEEEEECCCccCCCHHHhhccCCcccCCCCCCCCCCCEEeCCCCHHHHHHHHHHHhcCCCcEEEEEEeCccCCCCcc
Confidence 123568877777766532211111 01 112345667778887776663 468899999998888888
Q ss_pred cc----HHHHHHHHHHcCCEEEEeCCCC-CCCccC-----CCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHH
Q 016612 156 CD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKEL 224 (386)
Q Consensus 156 ~~----l~~i~~la~~~~~~li~D~a~~-~~~~~~-----~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~ 224 (386)
.| ++++.++|++||+++|+||++. .|-... .....+|+++ ++|.+++ | +.+|.++++ +++.+.+
T Consensus 241 ~p~~~yl~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDivt--~gK~lg~--G~~Pigavv~~-~~i~~~~ 315 (442)
T TIGR03372 241 LPPEGYLPAVRALCDEFGALLILDEVQTGMGRTGKMFACEHEGVQPDILC--LAKALGG--GVMPIGATIAT-EAVFSVL 315 (442)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEEeecccCCCccccchhhhhcCCCCCeee--ehhhhcC--CcccceEEEec-HHHHHhh
Confidence 87 9999999999999999999984 222211 1233578876 7999964 3 236777766 5565544
Q ss_pred HH--hhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceE
Q 016612 225 YF--LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 302 (386)
Q Consensus 225 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 302 (386)
.. .......+.++...++.+..++.+.. +.+.++++.+.+++.+.-. .+ ...++. ...+.++.|.++
T Consensus 316 ~~~~~~~~~T~~gnp~~~Aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~--~l----~~~~~~---~i~~vRG~Gl~~ 384 (442)
T TIGR03372 316 FDNPFLHTTTFGGNPLACAAALATINELLE--KNLPAQAAIKGDFLLDGFQ--QL----AAEYPD---LIIEARGKGLLM 384 (442)
T ss_pred hccCccccCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH--HH----HHhCCC---ceEEEecceEEE
Confidence 21 11122223466666666666654422 2344455554444433110 00 001110 001225788999
Q ss_pred EEEeCCHHhHHHHHhhcCcceeccC
Q 016612 303 SFLTGSLALSKHVVETTKYFSITVS 327 (386)
Q Consensus 303 ~~~~~~~~~~~~l~~~l~~~gi~~~ 327 (386)
.+.+.+......+.+.+..+|+.+.
T Consensus 385 giel~~~~~~~~i~~~l~~~Gvl~~ 409 (442)
T TIGR03372 385 AIEFRDNEIGYAFAKELFQQNILVA 409 (442)
T ss_pred EEEeCChHHHHHHHHHHHHCCcEEe
Confidence 9999665566778888888888654
No 287
>PRK05964 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.68 E-value=2.3e-15 Score=142.93 Aligned_cols=283 Identities=12% Similarity=0.114 Sum_probs=166.0
Q ss_pred CchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHh---c------CCCCEEEecCCCCCcHHHHHhhhccc------
Q 016612 54 NPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHL---L------GTGEEIVAGDDLYGGTDRLLSRVTPK------ 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~---~------~~g~~Vlv~~~~~~~~~~~~~~~~~~------ 116 (386)
++...++.+.+.+.+. .+...+++||++|+.+.+.+ . ....+|+.-+..|++.......+...
T Consensus 84 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~A~klar~~~~~~~~~~r~~ii~~~~~yHG~t~~~ls~~~~~~~~~~ 163 (423)
T PRK05964 84 HEPAERLAQRLVALTPGGLDHVFFSDSGSVAVEVALKMALQYWRNRGEPGRSRFLSLRGGYHGDTIGTMSVGDRGGMHAL 163 (423)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHHHHhcCCCcccccc
Confidence 3456677777777764 35788889999998643332 1 12357887777777653222222111
Q ss_pred -----CCcEEEEeCCCC-----HHHHHhhhC---CCceEEEEeC-CCCCCccccc----HHHHHHHHHHcCCEEEEeCCC
Q 016612 117 -----TGVVVKRVNTCD-----LDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 117 -----~g~~~~~v~~~d-----~~~l~~~~~---~~~~~v~~~~-~~nptG~~~~----l~~i~~la~~~~~~li~D~a~ 178 (386)
.+...+.++..| ++++++.+. +++.+|+++. .++..|...+ +++|.++|++||+++|+||++
T Consensus 164 ~~~~~~~~~~~~~~~~d~~~~~~~~l~~~l~~~~~~iaavi~Ep~i~~~gG~~~~~~~~l~~l~~lc~~~g~llI~DEv~ 243 (423)
T PRK05964 164 YTPLLFEQVTAPFPPDGYEQATLDALEALLEKHAGEIAAFIVEPLVQGAGGMLFYDPRYLAELRRICDRHGVLLIFDEIA 243 (423)
T ss_pred ccCcCCCCEEeCCCcchhHHHHHHHHHHHHHhCCCcEEEEEEecccccCCCcccCCHHHHHHHHHHHHHcCCEEEEechh
Confidence 122222333334 778887774 5678999987 5777787764 899999999999999999998
Q ss_pred C-CCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh------hhhcCCCCChhhHHHHHhc
Q 016612 179 M-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL------QNAEGSGLAPFDCWICLRG 246 (386)
Q Consensus 179 ~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~ 246 (386)
. .+... .......|++ +++|+++| +.+.+|+++++ +++.+.+... ......+.++....++...
T Consensus 244 tg~gr~G~~~a~~~~~v~pDi~--~~~K~l~g-G~~p~~av~~~-~~i~~~~~~~~~~~~~~~~~T~~~np~~~aaa~a~ 319 (423)
T PRK05964 244 TGFGRTGTLFACEQAGVSPDIM--CLSKGLTG-GYLPLAATLCT-AEIFEAFYSDDRAKAFMHSPSYTANPLACAAANAS 319 (423)
T ss_pred hCCCcCcchhHHHhcCCCCCee--eeehhhhc-CcccceEEEEc-HHHHHhhhcCCcccccccCCCCCcCHHHHHHHHHH
Confidence 5 22111 1122356776 56899965 23567888776 5566554321 1111123455555555555
Q ss_pred CCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHH---hHHHHHhhcCc
Q 016612 247 VKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA---LSKHVVETTKY 321 (386)
Q Consensus 247 ~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~---~~~~l~~~l~~ 321 (386)
++.+.. ..++..+..+.+.+.+++.. ..+.+ .+.++.|.++.+.+.+.. ....+.+.+..
T Consensus 320 l~~l~~~~~~~~~~~~g~~l~~~l~~l~-----------~~~~i----~~vrg~Gl~~~i~l~~~~~~~~~~~l~~~l~~ 384 (423)
T PRK05964 320 LDLFEDEPVLERVAALSAGLAEGLEPFR-----------DLPGV----ADVRVLGAIGAVELDRPVLERDGPALRAFALE 384 (423)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHhhc-----------cCCCe----EEeecccEEEEEEeccCcchhHHHHHHHHHHH
Confidence 443321 12333333444444444321 11111 112556788888885432 35677788877
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
+|+.+.+. .+.+|+++. .++++++++.+++++++
T Consensus 385 ~Gv~v~~~----------------------------~~~lR~~p~l~~t~edId~~v~~l~~al~~ 422 (423)
T PRK05964 385 RGVLLRPL----------------------------GNTIYLMPPYIITAEELDRITDAIVEVADE 422 (423)
T ss_pred CCeEEEec----------------------------CCEEEEeCCcccCHHHHHHHHHHHHHHHhh
Confidence 88765431 123999875 37777777777777764
No 288
>TIGR02407 ectoine_ectB diaminobutyrate--2-oxoglutarate aminotransferase. Members of this family of class III pyridoxal-phosphate-dependent aminotransferases are diaminobutyrate--2-oxoglutarate aminotransferase (EC 2.6.1.76) that catalyze the first step in ectoine biosynthesis from L-aspartate beta-semialdehyde. This family is readily separated phylogenetically from enzymes with the same substrate and product but involved in other process such as siderophore or 1,3-diaminopropane biosynthesis. The family TIGR00709 previously included both groups but has now been revised to exclude the ectoine biosynthesis proteins of this family. Ectoine is a compatible solute particularly effective in conferring salt tolerance.
Probab=99.68 E-value=2e-15 Score=142.47 Aligned_cols=319 Identities=14% Similarity=0.136 Sum_probs=178.6
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccC-CCCchHHHHHHHHHhhc--C--CC-ceEEe-CcHHHHHHHHHHh---
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTR-SGNPTRDALESLLAKLD--K--AD-RALCF-TSGMAALAAVTHL--- 89 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~-~g~~~~~~l~~~l~~~~--g--~~-~~i~~-~~gt~al~~~~~~--- 89 (386)
...+|..+|.+.++..... .. ..+.... ..++...++.+.+.+.. + .. ...++ +||++|+.+.+.+
T Consensus 46 ~~~lGh~~p~v~~ai~~ql---~~-~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~ 121 (412)
T TIGR02407 46 ALNYGHNNPKLKQALIDYL---AD-DGIIHSLDMATEAKREFLETFNEIILKPRGLDYKVQFPGPTGTNAVESALKLARK 121 (412)
T ss_pred hccCCCCCHHHHHHHHHHH---hh-ccceeccccCcHHHHHHHHHHHHhccCccCCCceEEEeCCCchHHHHHHHHHHhh
Confidence 4457888888776522211 11 1111111 13455667777777753 2 22 34444 7999998644332
Q ss_pred cCCCCEEEecCCCCCcHHHHHhhhc------ccCC---cEEEEeCCC--------CHHHHHhhhC------CCceEEEEe
Q 016612 90 LGTGEEIVAGDDLYGGTDRLLSRVT------PKTG---VVVKRVNTC--------DLDEVASAIG------PWTKLVWVE 146 (386)
Q Consensus 90 ~~~g~~Vlv~~~~~~~~~~~~~~~~------~~~g---~~~~~v~~~--------d~~~l~~~~~------~~~~~v~~~ 146 (386)
...+.+|+.-...|++......... ..++ ..+..+|.. +++.+++.+. +++.+|+++
T Consensus 122 ~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~~~~~~~~~~~~aavi~E 201 (412)
T TIGR02407 122 VTGRSNVVSFTNAFHGMTLGSLSVTGNRFKRQGAGVPLSNVSRMPYDGYLGGDVDTIAYFEKLLEDSSSGVDLPAAVILE 201 (412)
T ss_pred hcCCCeEEEECCCcCCchHHHHHhcCCcccccCCCCCCCCeEECCCCCccccchhHHHHHHHHHHhccCCCCceEEEEec
Confidence 3344678877777766532221211 1111 123444432 3666777775 357899999
Q ss_pred CCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCC---c--cCCCCCCccEEEeccccccccCCCceEEEEEEc
Q 016612 147 SPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPV---L--SRPLELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 147 ~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~---~--~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~ 216 (386)
...++.|.+.+ +++|.++|++||+++|+||+++ .|- . .......+|+++ ++|+++ +.|+++|+++++
T Consensus 202 pi~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GRtG~~~a~~~~~v~PDi~~--~~K~lg-~~G~pigav~~~ 278 (412)
T TIGR02407 202 TVQGEGGINVASDEWLQRLEKLCRRHDILLIVDDIQAGCGRTGTFFSFEPAGIEPDIVC--LSKSIS-GYGLPLALTLIK 278 (412)
T ss_pred cccCCCCCccCCHHHHHHHHHHHHHcCCEEEEechhhCCCccchhHHhcccCCCCCEEE--echhcc-CCccceeEEEEc
Confidence 99998888653 8999999999999999999986 221 1 122344678775 689984 446889999997
Q ss_pred ChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccC
Q 016612 217 GERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 296 (386)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 296 (386)
++ + ..+.........+.++....+....++.+ ...+...++.+.+.+++.+... .+...++.. + ...+
T Consensus 279 ~~-~-~~~~~~~~~~T~~gnpl~~aaa~a~l~~~-i~~~~l~~~~~~~g~~l~~~l~---~l~~~~~~~----~--~~vr 346 (412)
T TIGR02407 279 PE-L-DVWKPGEHNGTFRGNNLAFVTATAALEYY-WSDDAFEKAVQRKSEIIQERLD---RIVAEYPEL----I--KQVR 346 (412)
T ss_pred hh-h-hccCCCccCCCCCccHHHHHHHHHHHHHH-hcccHHHHHHHHHHHHHHHHHH---HHHhhCCCc----e--Eeee
Confidence 54 3 32221112222233444443333333321 1112344444444444443210 000111110 0 1235
Q ss_pred CCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHH
Q 016612 297 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 372 (386)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~ 372 (386)
+.|.++++.+++......+.+.+..+|+.+..... ..+.||+++.. +++++
T Consensus 347 g~Gl~~~l~l~~~~~~~~~~~~~~~~Gv~v~~~~~-------------------------~~~~lr~~p~l~~t~~~i~~ 401 (412)
T TIGR02407 347 GRGLMQGIECGDGDLAGKIAKAAFENGLIIETSGP-------------------------NDEVIKLLPPLTIDEETLQQ 401 (412)
T ss_pred cceeEEEEEecChHHHHHHHHHHHHCCCEEeccCC-------------------------CCCEEEEECCCCCCHHHHHH
Confidence 67888999997766677888888888886543211 23459998864 66777
Q ss_pred HHHHHHHHHh
Q 016612 373 LISDLDKALR 382 (386)
Q Consensus 373 ~i~~l~~~l~ 382 (386)
+++.+.++|+
T Consensus 402 ~~~~l~~~l~ 411 (412)
T TIGR02407 402 GLDILEQAVE 411 (412)
T ss_pred HHHHHHHHHh
Confidence 7777777664
No 289
>COG0160 GabT 4-aminobutyrate aminotransferase and related aminotransferases [Amino acid transport and metabolism]
Probab=99.68 E-value=1.9e-15 Score=139.63 Aligned_cols=318 Identities=15% Similarity=0.144 Sum_probs=190.5
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEeCcHHHHHHHHHH---hcCCC
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAAVTH---LLGTG 93 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~~~~---~~~~g 93 (386)
...+|..+|.+.++...... ......+...-.+...++.+.|.+.... +..++.+||++|+.+.+. ....+
T Consensus 67 v~~~GH~hP~Vv~Av~~q~~---~~~h~~~~~~~~e~~v~~ae~L~~~~p~~~~~~~~f~~sGaeA~E~AiKiAr~~Tgr 143 (447)
T COG0160 67 VLNLGHNHPRVVEAVKRQLA---KLNHTHTRDLYYEPYVELAEKLTALAPGSGLKKVFFGNSGAEAVEAAIKIARAYTGR 143 (447)
T ss_pred hhccCCCCHHHHHHHHHHHH---HhhcccCCcccchhHHHHHHHHHHhCCcccCCeEEecCCcHHHHHHHHHHHHHHhCC
Confidence 34477778777765332211 1111111111114455666666666543 368888999999864333 33445
Q ss_pred CEEEecCCCCCc-HHHHHhhh----cc-----cCCcEEEEeCCC-----------------CHHHHHhhhC------CCc
Q 016612 94 EEIVAGDDLYGG-TDRLLSRV----TP-----KTGVVVKRVNTC-----------------DLDEVASAIG------PWT 140 (386)
Q Consensus 94 ~~Vlv~~~~~~~-~~~~~~~~----~~-----~~g~~~~~v~~~-----------------d~~~l~~~~~------~~~ 140 (386)
..|+.-...|++ +...+.-. .. ...-.+..+|.. ..+.++..+. .++
T Consensus 144 ~~viaf~~afHG~T~galslT~~~~~~~~~~~~~~~~v~~~Pyp~~yr~p~~~~~~~~~~~~~~~~e~~i~~~~~~~~~v 223 (447)
T COG0160 144 PGVIAFDGAFHGRTLGALSLTGSKPPYKAGFGPLPPGVYHVPYPNPYRCPFGIGGEECGDDALEYIERALFDLEVGPEEV 223 (447)
T ss_pred CcEEEECCcccccchhhHHhccCccccccCCCCCCCCeEEecCCccccCcccCchhhhhHHHHHHHHHHHHhhcCCCCce
Confidence 667766666654 33322100 01 111124444432 1233444332 468
Q ss_pred eEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC----CCCccCCC--CCCccEEEeccccccccCCCceE
Q 016612 141 KLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPL--ELGADIVMHSATKFIAGHSDVMA 210 (386)
Q Consensus 141 ~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~----~~~~~~~~--~~~~di~~~S~sK~~~g~~g~~~ 210 (386)
.+++++..+...|.+.+ ++++.++|++||+++|+||+|. +|.+.... ...+|+++ ++|.+++ |+..
T Consensus 224 AaiI~EpIQgegG~~v~p~~fl~~l~~~~~~~gillI~DEVQtG~GRTG~~fa~E~~gv~PDivt--~aK~ig~--G~Pl 299 (447)
T COG0160 224 AAIIIEPIQGEGGIIVPPKGFLKALRKLCREHGILLIADEVQTGFGRTGKMFAFEHFGVEPDIVT--LAKSLGG--GLPL 299 (447)
T ss_pred eEEEEecccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCccccchhhhhcCCCCCEEE--ecccccC--CCce
Confidence 89999999998898875 8999999999999999999986 34433222 23579986 5999975 6778
Q ss_pred EEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhh
Q 016612 211 GVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 290 (386)
Q Consensus 211 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i 290 (386)
|.++++ +++++ ...-......+-++..+++....++.+.. +.+.+++..+.+++.+.-.-.+-.++.+
T Consensus 300 ~avv~r-~ei~~-~~~g~~~~Tf~GNpva~Aaa~AvL~vie~--e~L~~~a~~~G~~l~~~L~~l~~~~~~I-------- 367 (447)
T COG0160 300 SAVVGR-AEIMD-WPPGGHGGTFGGNPVACAAALAVLDVIEE--ENLLERAAELGEYLRDRLEELQEKHPLI-------- 367 (447)
T ss_pred eEEecc-HHhcc-cCCcccCCCCCcCHHHHHHHHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHhhcCce--------
Confidence 999887 55655 32322333345566666666555553332 3566666666666554311001111222
Q ss_pred hhhccCCCCceEEEEeC--------CHHhHHHHHhhcCcceecc-CCCCccccccccccccCCCCCHHHHHhcCCCCCeE
Q 016612 291 HYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITV-SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 361 (386)
Q Consensus 291 ~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~gi~~-~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 361 (386)
.+.+|.|.++.+++. +.....++.+++..+|+.+ ..|. ..+.|
T Consensus 368 --gdVRG~Glm~giE~v~d~~t~~p~~~~~~~i~~~~~~~Glil~~~G~--------------------------~~nvi 419 (447)
T COG0160 368 --GDVRGLGLMIGVELVKDRDTKEPDAELAAKIVARAFERGLLLLTCGP--------------------------HGNVL 419 (447)
T ss_pred --ecccccceEEEEEEecCCCCCCCCHHHHHHHHHHHHHcCCEEeccCC--------------------------CCcEE
Confidence 233778888988862 2467889999999999753 3332 24558
Q ss_pred EEEe----ccCChHHHHHHHHHHHhcC
Q 016612 362 RISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 362 Ris~----~~~~~~~~i~~l~~~l~~~ 384 (386)
||.+ +.++.++.++.|.++|+++
T Consensus 420 Ri~PPL~is~e~~d~~l~il~~al~~~ 446 (447)
T COG0160 420 RILPPLTISDEELDEGLDILEEALKEA 446 (447)
T ss_pred EEeCCcccCHHHHHHHHHHHHHHHHhh
Confidence 8876 4589999999999998764
No 290
>PRK11522 putrescine--2-oxoglutarate aminotransferase; Provisional
Probab=99.68 E-value=1.9e-15 Score=143.66 Aligned_cols=319 Identities=16% Similarity=0.172 Sum_probs=186.4
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---cC--
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LG-- 91 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~~-- 91 (386)
...+|..+|.+.++........ ..++.. .++...++.+.|.+.+.. +...+++||++|+.+.+.+ ..
T Consensus 93 ~~~lGH~~p~v~~Ai~~ql~~l-----~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~t~~ 167 (459)
T PRK11522 93 IFNVGHRNPVVVSAVQNQLAKQ-----PLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSP 167 (459)
T ss_pred hhhcCCCCHHHHHHHHHHHhhC-----cccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCchHHHHHHHHHHHHHhcc
Confidence 4557777877776433221111 111222 346677788888887643 3677888999998644332 22
Q ss_pred C-CCEEEecCCCCCcHHHHHhhhccc---------CCcEEEEeCCCCHHHHHhhhC------CCceEEEEeCCCCCCccc
Q 016612 92 T-GEEIVAGDDLYGGTDRLLSRVTPK---------TGVVVKRVNTCDLDEVASAIG------PWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 92 ~-g~~Vlv~~~~~~~~~~~~~~~~~~---------~g~~~~~v~~~d~~~l~~~~~------~~~~~v~~~~~~nptG~~ 155 (386)
+ ...|+.....|++........... ....+..++..|.+++++.+. +++.+|+++......|.+
T Consensus 168 ~gr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~iAavIvEpv~g~~G~~ 247 (459)
T PRK11522 168 RGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALSECKKTGDDVAAVILEPIQGEGGVI 247 (459)
T ss_pred CCCcEEEEecCCCCCCcHHHhhhcCCcccccCCCCCCCCCcccCCCCHHHHHHHHHHhhccCCcEEEEEEecccCCCCCc
Confidence 2 246777777776653221111110 011234555668888887764 467899999998888888
Q ss_pred cc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHH
Q 016612 156 CD----IRKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKEL 224 (386)
Q Consensus 156 ~~----l~~i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~ 224 (386)
.| ++++.++|++||+++|+||++. .|-.. ......+|++ +++|.+++ | +.+|.++++ +++.+.+
T Consensus 248 ~pp~~yl~~lr~lc~~~g~llI~DEV~tG~GRtG~~~a~e~~gv~PDiv--t~gK~lgg--G~~Pigav~~~-~~i~~~~ 322 (459)
T PRK11522 248 LPPEGYLTAVRKLCDEFGALLILDEVQTGMGRTGKMFACEHENVQPDIL--CLAKALGG--GVMPIGATIAT-EEVFSVL 322 (459)
T ss_pred cCCHHHHHHHHHHHHHcCCEEEeccceecCCccchhhhhhccCCCCCEE--EechhhhC--CCccceeEEEc-HHHHHHh
Confidence 76 9999999999999999999984 22111 1122357887 56999965 3 235666666 4455433
Q ss_pred H--HhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceE
Q 016612 225 Y--FLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 302 (386)
Q Consensus 225 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 302 (386)
. ........+.++...++++..++.+.. +...++.+.+.+++.+.-. . +.. .++. ...+.++.|.++
T Consensus 323 ~~~~~~~~~T~~gnp~~~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L~--~-l~~---~~~~---~i~~VrG~Gl~~ 391 (459)
T PRK11522 323 FDNPFLHTTTFGGNPLACAAALATINVLLE--QNLPAQAEQKGDYLLDGFR--Q-LAR---EYPD---LVQEARGKGMLM 391 (459)
T ss_pred ccCCcccCCCCCCCHHHHHHHHHHHHHHhc--chHHHHHHHHHHHHHHHHH--H-HHH---hCCC---ceeeEEeceeEE
Confidence 2 111222223466666666665554322 2334444444444433110 0 000 0110 001225678999
Q ss_pred EEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHH
Q 016612 303 SFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLD 378 (386)
Q Consensus 303 ~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~ 378 (386)
.+.+.+......+.+.+..+|+.+.... .....+|+.+. .++++++++.|.
T Consensus 392 giel~~~~~~~~i~~~l~~~Gvl~~~~~-------------------------~~~~~lr~~Ppl~~t~~~id~~l~~l~ 446 (459)
T PRK11522 392 AIEFVDNEIGYNFASEMFRQRVLVAGTL-------------------------NNAKTIRIEPPLTLTIEQCEQVLKAAR 446 (459)
T ss_pred EEEecCchHHHHHHHHHHHCCeEEEecC-------------------------CCCCEEEEECCccCCHHHHHHHHHHHH
Confidence 9998665556778888877888654211 02345888875 478888888888
Q ss_pred HHHhcC
Q 016612 379 KALRTG 384 (386)
Q Consensus 379 ~~l~~~ 384 (386)
++++++
T Consensus 447 ~~l~~~ 452 (459)
T PRK11522 447 KALAAM 452 (459)
T ss_pred HHHHHH
Confidence 887653
No 291
>PRK07495 4-aminobutyrate aminotransferase; Provisional
Probab=99.67 E-value=1.6e-15 Score=143.31 Aligned_cols=290 Identities=13% Similarity=0.103 Sum_probs=168.0
Q ss_pred CCchHHHHHHHHHhhcCC---CceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhc-----cc--CC-
Q 016612 53 GNPTRDALESLLAKLDKA---DRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVT-----PK--TG- 118 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~-----~~--~g- 118 (386)
.++...++.+.+.+.++. +...+++||++|+.+.+. ......+|+.-...|++.......+. .. ++
T Consensus 81 ~~~~~~~la~~l~~~~p~~~~~~v~f~~SGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~ 160 (425)
T PRK07495 81 PYENYVRLAERLNALVPGDFAKKTIFVTTGAEAVENAVKIARAATGRSAVIAFGGGFHGRTFMGMSLTGKVVPYKVGFGA 160 (425)
T ss_pred CCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCccHHHhhhcCCCcccccCCCC
Confidence 345666777778877643 367888999999864333 23344578877777766532111110 00 01
Q ss_pred --cEEEEeCCCC----------HHHHHhhhC-----CCceEEEEeCCCCCCcccc-c---HHHHHHHHHHcCCEEEEeCC
Q 016612 119 --VVVKRVNTCD----------LDEVASAIG-----PWTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 119 --~~~~~v~~~d----------~~~l~~~~~-----~~~~~v~~~~~~nptG~~~-~---l~~i~~la~~~~~~li~D~a 177 (386)
..+..++..+ ++++++.+. +++++|+++.....+|.+. | +++|.++|++||+++|+||+
T Consensus 161 ~~~~~~~~~~~~~~~g~~~~~~~~~l~~~~~~~~~~~~iaavi~EPv~g~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv 240 (425)
T PRK07495 161 MMPDVYHVPFPVELHGVSVEQSLAALDKLFKADVDPQRVAAIIIEPVQGEGGFYPAPAAFMKALRELCDQHGILLIADEV 240 (425)
T ss_pred CCCCeEEecCCcccccccHHHHHHHHHHHHHhccCCCceEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 1233333321 445566542 4688999987766677554 3 89999999999999999999
Q ss_pred CCC-CCccC---C--CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH
Q 016612 178 IMS-PVLSR---P--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA 251 (386)
Q Consensus 178 ~~~-~~~~~---~--~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (386)
+.. +.... . .....|+ .+++|.+++ |+++|+++++ +++.+.+.........+.++..+++....++.+.
T Consensus 241 ~tG~gr~G~~~a~~~~gv~pDi--~tlsK~l~~--G~pigav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~ 315 (425)
T PRK07495 241 QTGFARTGKLFAMEHHEVAADL--TTMAKGLAG--GFPLAAVTGR-AEIMDAPGPGGLGGTYGGNPLGIAAAHAVLDVIE 315 (425)
T ss_pred hhcCCcCCCceeecccCCCCCE--EeehhhhcC--CccceEEEEc-HHHHhccCCCCcCCCCCCCHHHHHHHHHHHHHHH
Confidence 762 11111 1 1123455 567999963 6789999987 4565544332223334556666665555554332
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-------HHhHHHHHhhcCccee
Q 016612 252 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------LALSKHVVETTKYFSI 324 (386)
Q Consensus 252 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------~~~~~~l~~~l~~~gi 324 (386)
. +.+.++++.+.+++.+.-. . +.. .++.. ...++.|.++++.+.+ ......+.+.+...|+
T Consensus 316 ~--~~l~~~~~~~g~~l~~~L~--~-l~~---~~~~i----~~vrG~Gl~~~iel~~~~~~~~~~~~~~~~~~~~~~~Gv 383 (425)
T PRK07495 316 E--EDLCERANQLGNRLKQRLA--S-LRE---TVPEI----ADIRGPGFMNAVEFNDADSGLPSAEFANRVRLKALEKGL 383 (425)
T ss_pred h--chHHHHHHHHHHHHHHHHH--H-HHh---hCCCe----eeeecCceEEEEEEecCCCCCccHHHHHHHHHHHHHCCe
Confidence 1 2344444444444433210 0 000 11110 1225678888888732 1235567777777787
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhcC
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~~ 384 (386)
.+...+. ..+.+|+.+ +.+++++.++.|.++|++.
T Consensus 384 l~~~~g~-------------------------~~~~~r~~Ppl~it~~~id~~~~~l~~~l~~~ 422 (425)
T PRK07495 384 ILLTCGV-------------------------HGNVIRFLAPITIQDDVFAEALDILEASILEA 422 (425)
T ss_pred EEeecCC-------------------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHHH
Confidence 6532110 134588875 4588999999999998764
No 292
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.67 E-value=2e-14 Score=143.88 Aligned_cols=156 Identities=21% Similarity=0.234 Sum_probs=123.6
Q ss_pred hHHHHHHHHHhhcCCCceEEe-CcHHHHHH-HHHHhc--------CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 56 TRDALESLLAKLDKADRALCF-TSGMAALA-AVTHLL--------GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~-~~gt~al~-~~~~~~--------~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
...++++++++++|.++.-+. ++|+.|-. .+++.. ...++|+++...|++.. ..++..|++++.++
T Consensus 531 ~i~elq~~l~eltGmd~~Sl~p~aGA~gE~agL~aiR~y~~~rge~~R~~vlip~saHgtnP----asa~~~G~~Vv~V~ 606 (939)
T TIGR00461 531 LIAQLEKWLCSITGFDAISLQPNSGAQGEYAGLRVIRSYHESRGENHRNICLIPVSAHGTNP----ASAAMAGMQVVPVN 606 (939)
T ss_pred HHHHHHHHHHHHHCCCCcccCCchHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEccccCcCH----HHHHHCCCEEEEec
Confidence 578899999999999965444 44555543 333321 23467999999998775 44667799999998
Q ss_pred CC-----CHHHHHhhhC---CCceEEEEeCCCCCCccccc-HHHHHHHHHHcCCEEEEeCCCCCCC--ccCCCCCCccEE
Q 016612 126 TC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIV 194 (386)
Q Consensus 126 ~~-----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~-l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~~di~ 194 (386)
++ |+++|+++++ +++++|++++|+| +|.+.+ +++|+++||++|.++++|.++..+. +.++.+.|+|++
T Consensus 607 ~d~~G~iDle~L~~~i~~~~~~taaV~iT~pst-~G~~e~~I~eI~~iah~~G~~v~VDgAq~~al~~l~~Pg~~GaDi~ 685 (939)
T TIGR00461 607 CDQDGNIDLVDLKNKAEQHGDELAAVMVTYPST-HGVFEPTIQHACDIVHSFGGQVYLDGANMNAQVGLTSPGDLGADVC 685 (939)
T ss_pred cCCCCCcCHHHHHHHHhhcCCceEEEEEEeCCc-CceecccHHHHHHHHHHcCCEEEEEecChhhCCCCCCccccCCCEE
Confidence 74 8999999997 4899999999999 788876 9999999999999999999996533 445677899999
Q ss_pred Eeccccccc-----cCCCceEEEEEEcCh
Q 016612 195 MHSATKFIA-----GHSDVMAGVLAVKGE 218 (386)
Q Consensus 195 ~~S~sK~~~-----g~~g~~~G~i~~~~~ 218 (386)
++|.||+|+ |++| .|++.+++.
T Consensus 686 ~~s~HKtf~~P~G~GGPg--~G~i~vr~~ 712 (939)
T TIGR00461 686 HLNLHKTFCIPHGGGGPG--MGPIGVKSH 712 (939)
T ss_pred EecCCccCCCCCCCCCCC--eEEEEEhhh
Confidence 999999887 5555 699999853
No 293
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.67 E-value=8.6e-15 Score=145.55 Aligned_cols=151 Identities=21% Similarity=0.270 Sum_probs=118.6
Q ss_pred CC-chHHHHHHHHHhhcCCCceEEeC-cHHHHH-HHHHHhc--------CCCCEEEecCCCCCcHHHHHhhhcccCCcEE
Q 016612 53 GN-PTRDALESLLAKLDKADRALCFT-SGMAAL-AAVTHLL--------GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (386)
Q Consensus 53 g~-~~~~~l~~~l~~~~g~~~~i~~~-~gt~al-~~~~~~~--------~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 121 (386)
|. ....++++++++++|.+..-+.. +|+.+- ..++++. ...++|+++...|++.. ..+...|+++
T Consensus 540 G~lq~i~elq~~l~eLtGmd~~Sl~p~sGA~gE~A~Lmair~yh~~~Ge~~r~~vLIp~saHgtNp----asa~~~GieV 615 (954)
T PRK12566 540 GYRAMIDELEAWLCAITGFDAICMQPNSGAQGEYAGLLAIRRYHRSRGQSQRDICLIPSSAHGTNP----ASAQMAGMRV 615 (954)
T ss_pred CHHHHHHHHHHHHHHHHCCCeEeecCCchHHHHHHHHHHHHHHHHhcCCCCCCEEEecccccccCH----HHHHHCCCEE
Confidence 54 36888999999999999766665 666664 3444421 12467889998997764 2355679999
Q ss_pred EEeCCC-----CHHHHHhhhC---CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC--ccCCCCCCc
Q 016612 122 KRVNTC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGA 191 (386)
Q Consensus 122 ~~v~~~-----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~~ 191 (386)
+.++.+ |+++|+++++ +++.+|++++|++-.+...++++|+++||++|+++++|.++..+. +..+.+.|+
T Consensus 616 v~Vp~D~~G~iDle~L~a~I~~~~~~laaVmiT~Pnt~Gv~e~~V~eI~~iah~~Galv~vDgA~~~a~~~l~~Pg~~GA 695 (954)
T PRK12566 616 VIVECDPDGNVDLDDLKAKAAAAGDRLSCLMITYPSTHGVYEEGIREICEVVHQHGGQVYMDGANLNAQVGLARPADIGA 695 (954)
T ss_pred EEeccCCCCCcCHHHHHHHhhccCCCEEEEEEEecCcCceecchHHHHHHHHHHcCCEEEEEeeChhhccCCCChhhcCC
Confidence 999874 8999999987 688889999999866555679999999999999999999997544 345678899
Q ss_pred cEEEeccccccccCCC
Q 016612 192 DIVMHSATKFIAGHSD 207 (386)
Q Consensus 192 di~~~S~sK~~~g~~g 207 (386)
|++++|+||||++|.|
T Consensus 696 Di~~~s~HKtf~~P~G 711 (954)
T PRK12566 696 DVSHMNLHKTFCIPHG 711 (954)
T ss_pred CEEEecCCcccCcCcc
Confidence 9999999999986665
No 294
>PRK05367 glycine dehydrogenase; Provisional
Probab=99.66 E-value=1.4e-14 Score=147.21 Aligned_cols=157 Identities=23% Similarity=0.297 Sum_probs=123.0
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHh-cCC--CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCH
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL-LGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDL 129 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~-~~~--g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~ 129 (386)
...++++.+++++|.+ +.-++.++|++..++ ++. +++ +++|++++..|+.+..++...++..|++++.++..+
T Consensus 122 al~~~Qt~la~LtG~~~anaSl~d~aTAa~ea~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~G~ev~~~~~~~- 200 (954)
T PRK05367 122 ALLNFQTMVADLTGLEIANASLLDEATAAAEAMALAKRVSKSKSNRFFVDDDVHPQTLDVLRTRAEPLGIEVVVGDAAK- 200 (954)
T ss_pred HHHHHHHHHHHHHCCChhhccccccHHHHHHHHHHhhhhccCCCCEEEEcCccCHHHHHHHHHHHHhCCCEEEEecCcc-
Confidence 3566778899999998 566777777777643 343 445 489999999999998888888889999999998753
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCC-CCCCccCCCCCCccEEEeccccc-----cc
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKF-----IA 203 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~-~~~~~~~~~~~~~di~~~S~sK~-----~~ 203 (386)
++. ++++..+++.+| |.+|.+.|+++|+++||++|+++++|..+ +.....++.++|+|++++|.+|| ++
T Consensus 201 -d~~---~~~~~~vlvq~p-~~~G~i~d~~~i~~~ah~~Gal~~vda~~~Al~~l~~pge~GaDi~vgs~qkfg~P~g~G 275 (954)
T PRK05367 201 -ALD---HDDVFGVLLQYP-GTSGEVRDYTALIAAAHARGALVAVAADLLALTLLTPPGEMGADIAVGSAQRFGVPMGFG 275 (954)
T ss_pred -CCC---cccEEEEEEecC-CCCeeeccHHHHHHHHHHcCCEEEEEehhhhccCCCChhhcCCCEEEeeCcccCCCCCCC
Confidence 111 345666666666 45899999999999999999999999976 44555577889999999999999 76
Q ss_pred cCCCceEEEEEEcChhHHH
Q 016612 204 GHSDVMAGVLAVKGERLAK 222 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~ 222 (386)
|| + .|+++++++ +.+
T Consensus 276 GP-~--aGflavr~~-~~r 290 (954)
T PRK05367 276 GP-H--AAYFAVRDA-YKR 290 (954)
T ss_pred CC-C--EEEEEECHH-HHh
Confidence 76 3 799999854 433
No 295
>PRK08360 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=1.3e-14 Score=137.78 Aligned_cols=313 Identities=13% Similarity=0.095 Sum_probs=176.2
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---cCCC
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LGTG 93 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~~~g 93 (386)
...+|..+|.+.++...... ...+..... .++...++.+.|.+..+. +...+++||++|+.+.+.+ ....
T Consensus 52 ~~~lGh~~p~v~~Ai~~ql~----~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~tgr 127 (443)
T PRK08360 52 VQNVGHNNPRVVKAIKEQTD----KLIHYTPIYGFPVEPLLLAEKLIEIAPGDNPKVSFGLSGSDANDGAIKFARAYTKR 127 (443)
T ss_pred hcccCCCCHHHHHHHHHHHH----hccCccccccCcHHHHHHHHHHHHhCCCCCCEEEEcCCHHHHHHHHHHHHHHhcCC
Confidence 44577777776654221111 111111111 245566777778887654 3677889999998643332 2344
Q ss_pred CEEEecCCCCCcH-HHHHhhhcc-------cCC--cEEEEeCCC-----------------CHHHHHhhhC-----CCce
Q 016612 94 EEIVAGDDLYGGT-DRLLSRVTP-------KTG--VVVKRVNTC-----------------DLDEVASAIG-----PWTK 141 (386)
Q Consensus 94 ~~Vlv~~~~~~~~-~~~~~~~~~-------~~g--~~~~~v~~~-----------------d~~~l~~~~~-----~~~~ 141 (386)
..|+.-...|++. ...+ .... .++ ..+.+++.. +.+.+++.+. ++++
T Consensus 128 ~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iA 206 (443)
T PRK08360 128 RKILSYLRSYYGSTYGAM-SLTGLDFPVRALVGELSDVHYIPYPDCYRCPFGKEPGSCKMECVEYIKEKFEGEVYAEGVA 206 (443)
T ss_pred CeEEEEeCCcCCcCHHHH-HhcCCCcccccCCCCCCCcEEEeCCccccccccCchhhhHHHHHHHHHHHHHhccCCCCeE
Confidence 5677666666554 2222 1100 001 112222221 2334555552 5799
Q ss_pred EEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEE
Q 016612 142 LVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAG 211 (386)
Q Consensus 142 ~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G 211 (386)
+|+++..+|++|.+.+ +++|.++|++||+++|+||++.. +.... ......|++ +++|.++ +|+++|
T Consensus 207 Avi~eP~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~gr~G~~~a~~~~~~~pDii--tlsK~l~--~G~pig 282 (443)
T PRK08360 207 ALFAEPIQGDAGMIVPPEDYFKKLKKILDEHGILLVVDEVQSGLGRTGKWFAIEHFGVEPDII--TLGKPLG--GGLPIS 282 (443)
T ss_pred EEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCccchhhhhcCCCCCEE--Eeccccc--CCceeE
Confidence 9999988899998875 89999999999999999999862 22111 112346766 5699996 368999
Q ss_pred EEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchh
Q 016612 212 VLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHE 289 (386)
Q Consensus 212 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~ 289 (386)
+++++ +++.+.+...........++..+.++...++.+.. ..++..+..+.+.+.+++... ..+.+
T Consensus 283 av~~~-~~i~~~~~~~~~~~T~~~~p~~~aaa~a~l~~l~~~~l~~~~~~~g~~l~~~L~~l~~----~~~~v------- 350 (443)
T PRK08360 283 ATIGR-AEIMDSLPPLAHAFTLSGNPVASAAALAVIEEIEEKNLLKRAEKLGNYTKKRLEEMKK----KHELI------- 350 (443)
T ss_pred EEEEc-HHHHhhhcCCCCCCCCCcCHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH----hCCCe-------
Confidence 99987 55665554332233344556666665555544322 122222333333333332110 00111
Q ss_pred hhhhccCCCCceEEEEeCC--------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeE
Q 016612 290 LHYSQAKGAGSVLSFLTGS--------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLV 361 (386)
Q Consensus 290 i~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~i 361 (386)
.+.++.|.++.+.+.+ ......+.+.+..+|+.+... ..+.+
T Consensus 351 ---~~vrg~Gl~~gie~~~~~~~~~~~~~~~~~~~~~l~~~Gi~~~~~---------------------------~~~~l 400 (443)
T PRK08360 351 ---GDVRGIGLMIGVDLVKDRETKERAYEEAAKVVWRAWELGLIVTFF---------------------------SGNVL 400 (443)
T ss_pred ---eeeeccceEEEEEEecCCcccCccHHHHHHHHHHHHHCCeEEeec---------------------------CCCEE
Confidence 1225678888887731 123556777777778754321 12348
Q ss_pred EEEec----cCChHHHHHHHHHHHhc
Q 016612 362 RISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 362 Ris~~----~~~~~~~i~~l~~~l~~ 383 (386)
|+++. .++++++++.+.++++.
T Consensus 401 r~~P~l~~t~~~id~~~~~l~~~l~~ 426 (443)
T PRK08360 401 RIQPPLTIEKEVLDEGLDILEEAIED 426 (443)
T ss_pred EEeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 88765 47788888888887764
No 296
>PRK06058 4-aminobutyrate aminotransferase; Provisional
Probab=99.66 E-value=1e-14 Score=138.97 Aligned_cols=288 Identities=17% Similarity=0.214 Sum_probs=169.4
Q ss_pred CchHHHHHHHHHhhcCC---CceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhcc-----cCC----
Q 016612 54 NPTRDALESLLAKLDKA---DRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVTP-----KTG---- 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~-----~~g---- 118 (386)
++...++.+.+.+.++. +..++++||++|+.+.+. .....++|+..+..|++.......+.. ..+
T Consensus 98 ~~~~~~la~~l~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~al~~~~~~~~~~~~~~~~ 177 (443)
T PRK06058 98 YEGYVAVAEQLNRLTPGDHEKRSALFNSGAEAVENAVKIARSYTGRQAVVVFDHAYHGRTNLTMALTAKSMPYKSGFGPF 177 (443)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEEeCCcHHHHHHHHHHHHHhhCCCeEEEECCCcCcChHHHHhhcCCCcccccccCCC
Confidence 35667777888777642 367888999999864333 233457888888888776422111110 000
Q ss_pred -cEEEEeCC----CC---------------HHHHHhhhC-CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEE
Q 016612 119 -VVVKRVNT----CD---------------LDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLL 173 (386)
Q Consensus 119 -~~~~~v~~----~d---------------~~~l~~~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li 173 (386)
..+..++. .+ .+.+++.+. +++.+|+++..+...|.+.| +++|.++|++||+++|
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iAavi~EPi~g~gG~~~p~~~yl~~lr~lc~~~gillI 257 (443)
T PRK06058 178 APEVYRAPMSYPYRDPKGLATDGEEAAARAITVIEKQVGADNLAAVIIEPIQGEGGFIVPAEGFLPALLEWCRENGVVFI 257 (443)
T ss_pred CCCceEcCCCcccccccccccchHHHHHHHHHHHHHhhCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEE
Confidence 11222221 11 223444443 67889998877766666654 8999999999999999
Q ss_pred EeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC
Q 016612 174 VDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV 247 (386)
Q Consensus 174 ~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
.||++.. +-.. ......+|+++. +|.+++ |+++|+++++ +++.+.+.........+.++...+++...+
T Consensus 258 ~DEV~tGfgRtG~~fa~~~~gv~PDiv~~--gK~l~~--G~Pi~av~~~-~~i~~~~~~~~~~~T~~gnpl~~aaa~a~L 332 (443)
T PRK06058 258 ADEVQTGFARTGAWFACEHEGIVPDLITT--AKGIAG--GLPLSAVTGR-AEIMDAPHPGGLGGTYGGNPVACAAALAAI 332 (443)
T ss_pred EeccccCCCcChhhhHHHhcCCCCCEEEE--cccccC--CCccEEEEEc-HHHHhhccCCCCCCCCCCCHHHHHHHHHHH
Confidence 9999852 2111 112345688865 799963 6789999986 456554433322333456666666666655
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------CHHhHHHHHhhcC
Q 016612 248 KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------SLALSKHVVETTK 320 (386)
Q Consensus 248 ~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~l~ 320 (386)
+.+.. +...++.+.+.+++.+.-. .+ ...++. ..+.++.|.++.+.+. +......+.+++.
T Consensus 333 ~~~~~--~~l~~~~~~~g~~l~~~L~--~l----~~~~~~----i~~vrg~G~~~~i~~~~~~~~~~~~~~~~~l~~~~~ 400 (443)
T PRK06058 333 ETIEE--DDLVARARQIEALMTDRLR--AL----AAEDDR----IGDVRGRGAMIAIELVKPGTTEPDAELTKALAAAAH 400 (443)
T ss_pred HHHHH--cCHHHHHHHHHHHHHHHHH--HH----HhhCCc----EEeeeccceEEEEEEecCCCCCCcHHHHHHHHHHHH
Confidence 54322 2334444444444432110 00 000100 0122567888888872 2345667888887
Q ss_pred cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 321 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 321 ~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
..|+.+.++.. ..+++|+.+. .+++++.++.+.++|++
T Consensus 401 ~~Gv~~~~~~~-------------------------~~~~lr~~Ppl~~t~~~i~~~~~~l~~~l~~ 442 (443)
T PRK06058 401 AAGVIVLTCGT-------------------------YGNVIRLLPPLVIGDELLREGLDVLEAALAD 442 (443)
T ss_pred HCCeEEeccCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHh
Confidence 88887654321 1245888764 48888888888888865
No 297
>PF00464 SHMT: Serine hydroxymethyltransferase; InterPro: IPR001085 Synonym(s): Serine hydroxymethyltransferase, Serine aldolase, Threonine aldolase Serine hydroxymethyltransferase (SHMT) is a pyridoxal phosphate (PLP) dependent enzyme and belongs to the aspartate aminotransferase superfamily (fold type I) []. The pyridoxal-P group is attached to a lysine residue around which the sequence is highly conserved in all forms of the enzyme []. The enzyme carries out interconversion of serine and glycine using PLP as the cofactor. SHMT catalyses the transfer of a hydroxymethyl group from N5, N10- methylene tetrahydrofolate to glycine, resulting in the formation of serine and tetrahydrofolate. Both eukaryotic and prokaryotic SHMT enzymes form tight obligate homodimers and the mammalian enzyme forms a homotetramer [, ]. PLP dependent enzymes were previously classified into alpha, beta and gamma classes, based on the chemical characteristics (carbon atom involved) of the reaction they catalysed. The availability of several structures allowed a comprehensive analysis of the evolutionary classification of PLP dependent enzymes, and it was found that the functional classification did not always agree with the evolutionary history of these enzymes. Structure and sequence analysis has revealed that the PLP dependent enzymes can be classified into four major groups of different evolutionary origin: aspartate aminotransferase superfamily (fold type I), tryptophan synthase beta superfamily (fold type II), alanine racemase superfamily (fold type III), D-amino acid superfamily (fold type IV) and glycogen phophorylase family (fold type V) [, ]. In vertebrates, glycine hydroxymethyltransferase exists in a cytoplasmic and a mitochondrial form whereas only one form is found in prokaryotes.; GO: 0004372 glycine hydroxymethyltransferase activity, 0006544 glycine metabolic process, 0006563 L-serine metabolic process; PDB: 3GBX_B 3H7F_A 1YJS_A 2VMW_A 2W7H_A 2W7E_A 2VMY_B 2W7L_A 2VMZ_A 2VMS_A ....
Probab=99.65 E-value=2.3e-13 Score=124.88 Aligned_cols=206 Identities=21% Similarity=0.182 Sum_probs=126.8
Q ss_pred HHHHHHhhcCCC----c-eEEeCcHHHHH-HHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc-------CCcEEEEeCC
Q 016612 60 LESLLAKLDKAD----R-ALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-------TGVVVKRVNT 126 (386)
Q Consensus 60 l~~~l~~~~g~~----~-~i~~~~gt~al-~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-------~g~~~~~v~~ 126 (386)
..++++++|+.+ . .+-.-||+.|. .++.++++|||+|+..+..++++..+ ...... ...+.+.++.
T Consensus 71 a~~ra~~lF~~~~~~w~anvqp~SGs~An~av~~aLl~pGD~Im~l~l~~GGHlsh-g~~~~~~~~~~~~~~~~~~~y~~ 149 (399)
T PF00464_consen 71 AIERAKELFGAEPKEWYANVQPHSGSQANLAVYMALLKPGDTIMGLSLPHGGHLSH-GSSVNFKKISASGLYFESVPYPV 149 (399)
T ss_dssp HHHHHHHHHT-STTTEEEE---SSHHHHHHHHHHHHT-TT-EEEEEEGGGT--GGG-T-TTSHSBSSHHHHHSEEEEEEB
T ss_pred HHHHHHHHhCCCcccceEEeecCCchHHHHHHHHHHHhhcCcEEecChhhcccccc-cccccccccccccceEEEEeeee
Confidence 456677889988 4 34456888775 46788999999999888766655311 011111 1124444432
Q ss_pred C------CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC-----CCCccCCCCCCccEE
Q 016612 127 C------DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLSRPLELGADIV 194 (386)
Q Consensus 127 ~------d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~-----~~~~~~~~~~~~di~ 194 (386)
+ |.+++++.+. .++++|++...++| ...|++++.++|++.|.+|++|.+|. .+.+++|+.. +|++
T Consensus 150 d~~~~~ID~d~l~~~a~~~kPklIi~G~S~y~--~~~d~~~~reIad~vga~l~~D~sH~~GLIa~g~~~~P~~~-ADvv 226 (399)
T PF00464_consen 150 DPDTGLIDYDELEKLAKEHKPKLIICGASSYP--RPIDFKRFREIADEVGAYLMADISHIAGLIAGGLFPNPFPY-ADVV 226 (399)
T ss_dssp -TTTSSB-HHHHHHHHHHH--SEEEEE-SSTS--S---HHHHHHHHHHTT-EEEEE-TTTHHHHHTTSS--GCCT-SSEE
T ss_pred ecCCCeECHHHHHHHHhhcCCCEEEECchhcc--CccCHHHHHHHHHhcCcEEEecccccccceehheecCcccc-ceEE
Confidence 2 8899998876 68999998876654 56799999999999999999999986 4567788875 9999
Q ss_pred EeccccccccCCCceEEEEEEc-------------ChhHHHHHHHhhhhcCCCCChhhH-----HHHHhcCC-cHHHHHH
Q 016612 195 MHSATKFIAGHSDVMAGVLAVK-------------GERLAKELYFLQNAEGSGLAPFDC-----WICLRGVK-TMALRVE 255 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~ 255 (386)
++|+||+|.||. +|+|.++ ++++.+++.........+...... .++...+. .+..+.+
T Consensus 227 t~sThKtl~GPr---ggiI~~~~~~~~~~~~~~~~~~~l~~~I~~avfP~~qg~~h~~~iaalAval~ea~~~~fk~Ya~ 303 (399)
T PF00464_consen 227 TGSTHKTLRGPR---GGIILTNKGSKNVDKKGKEIDEELAEKIDSAVFPGLQGGPHMHRIAALAVALKEALSPEFKEYAK 303 (399)
T ss_dssp EEESSGGG-SSS----EEEEES-SEEEE-TTS-EEEHHHHHHHHHHHTTTT-SS--HHHHHHHHHHHHHHTSHHHHHHHH
T ss_pred EeeccccccccC---ceEEEEcCCccccCCcccccHHHHHHHhccccCCCcccCcchhHHHHHHHHHhcccCHHHHHHHH
Confidence 999999998875 6999998 466777666544332222122111 11122233 3567788
Q ss_pred HHHHHHHHHHHHHhhCC
Q 016612 256 KQQDNAQKIAEFLASHP 272 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~ 272 (386)
+..+|++.|.+.|.+..
T Consensus 304 qVv~NAk~La~~L~~~G 320 (399)
T PF00464_consen 304 QVVKNAKALAEALQERG 320 (399)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhhCC
Confidence 88999999999999874
No 298
>PRK06918 4-aminobutyrate aminotransferase; Reviewed
Probab=99.65 E-value=7.7e-15 Score=140.21 Aligned_cols=288 Identities=14% Similarity=0.165 Sum_probs=163.4
Q ss_pred CchHHHHHHHHHhhcCC---CceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhccc-------CC--
Q 016612 54 NPTRDALESLLAKLDKA---DRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVTPK-------TG-- 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-------~g-- 118 (386)
++...++.+.|.++++. +...+++||++|+.+.+. ......+|+.-..+|++.......+... ++
T Consensus 96 ~~~~~~la~~L~~~~p~~~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~ 175 (451)
T PRK06918 96 YEPYIELAEKLAALAPGSFDKKVLFLNSGAEAVENAVKIARKYTKRQGIISFSRGFHGRTLMTMTMTSKVKPYKFGFGPF 175 (451)
T ss_pred cHHHHHHHHHHHHhCCCCCCCEEEEcCCcHHHHHHHHHHHHHHhCCCcEEEECCCcCccchhhhhhcCCCccccccCCCC
Confidence 45667777778887742 367888999999864333 2333456777777776653221121110 00
Q ss_pred -cEEEEeCCCC-----------------HHHHHhhh-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCE
Q 016612 119 -VVVKRVNTCD-----------------LDEVASAI-----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGAL 171 (386)
Q Consensus 119 -~~~~~v~~~d-----------------~~~l~~~~-----~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~ 171 (386)
..+..++..+ .+.+++.+ .+++.+|+++..+...|.+.+ +++|.++|++||++
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAavi~EPi~g~gG~~~~~~~~l~~l~~l~~~~gil 255 (451)
T PRK06918 176 APEVYKAPFPYEYRRPEGLTEEQYDDFMIEEFKNFFISEVAPETIAAVVMEPVQGEGGFIVPSKKFVQEVRNICSEHGIL 255 (451)
T ss_pred CCCcEEcCCCccccccccCchHHHHHHHHHHHHHHHHhhcCCCceEEEEECcccCCCCCccCCHHHHHHHHHHHHHcCCE
Confidence 1122222110 12233322 256888988887766676553 89999999999999
Q ss_pred EEEeCCCCC-CCcc---CCCCC--CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 172 LLVDNSIMS-PVLS---RPLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 172 li~D~a~~~-~~~~---~~~~~--~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
+|+||++.. +... ..... ..|++ |+||.++ +|+++|+++++ +++.+.+.........+.++..+.++..
T Consensus 256 lI~DEV~tg~gr~g~~~a~~~~~v~pDi~--t~sK~l~--~G~pig~v~~~-~~i~~~~~~~~~~~T~~g~~l~~aaa~a 330 (451)
T PRK06918 256 FVADEIQTGFARTGKYFAIEHFDVVPDLI--TVSKSLG--AGVPISGVIGR-KEIMDESAPGELGGTYAGSPLGCAAALA 330 (451)
T ss_pred EEEeccccCcCccCceehhHhcCCCCCEE--eeehhhc--CCCccEEEEEc-HHHHhccCCCCcCcCCCcCHHHHHHHHH
Confidence 999999763 2211 11112 36755 7899995 36899999987 4565544332333334556666666444
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--------CHHhHHHHHh
Q 016612 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVE 317 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~l~~ 317 (386)
.++.+. .+...++.+.+.+.+.+... . +.. .++. ....++.|.++.+.+. +.....++.+
T Consensus 331 ~l~~i~--~~~~~~~~~~~g~~l~~~l~--~-l~~---~~~~----~~~vrg~G~~~~~~~~~~~~~~~~~~~~~~~l~~ 398 (451)
T PRK06918 331 VLDIIE--KENLNDRAIELGKVVMNRFE--E-MKN---KYNC----IGDVRGLGAMCAFELVQDRKTKEPDKTLTANICK 398 (451)
T ss_pred HHHHHH--HCCHHHHHHHHHHHHHHHHH--H-HHh---hCCC----ceeeccceeEEEEEEccCCCcCCCcHHHHHHHHH
Confidence 443221 12233344444443332110 0 000 0110 0112456788887662 3345677888
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.+...|+.+.++.. ..+++|++++ .+++++.++.|.+++++
T Consensus 399 ~~~~~Gvlv~~~~~-------------------------~~~~lrl~p~l~~t~~~id~~l~~l~~~l~~ 443 (451)
T PRK06918 399 EANKRGLLLLSAGT-------------------------YGNVIRVLMPLVITDEQLEEGLTIIEESLQA 443 (451)
T ss_pred HHHHCCeEEeecCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 88888887655432 1245999975 37788888888887764
No 299
>KOG1357 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=7.4e-16 Score=137.76 Aligned_cols=285 Identities=19% Similarity=0.188 Sum_probs=186.2
Q ss_pred CC-chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHH
Q 016612 53 GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD 130 (386)
Q Consensus 53 g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~ 130 (386)
|. ...+++++..+++.|.+++++++-|.+... .+-.++.||.-|+..+..|.+.. .-++..|+.++.+..+|..
T Consensus 179 G~~~~hkelE~l~A~f~g~e~a~vF~mGf~TNs~~~p~l~~~gsLIiSDelNHaSi~----~GaRLSgAtiRVfkHNdm~ 254 (519)
T KOG1357|consen 179 GTTEEHKELEELVARFLGVEDAIVFSMGFATNSMNIPSLLGKGSLIISDELNHASLI----TGARLSGATTRVFRHNDMQ 254 (519)
T ss_pred ccHHHHHHHHHHHHHhcCCcceEEEeccccccccCcceeecCCcceeeccccchhee----ccccccCceEEEEecCCHH
Confidence 54 378999999999999999999999976554 45668899998888888887763 5577889999999999999
Q ss_pred HHHhhhC-------CCc------eEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----------CCC
Q 016612 131 EVASAIG-------PWT------KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----------RPL 187 (386)
Q Consensus 131 ~l~~~~~-------~~~------~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----------~~~ 187 (386)
+||+.+. ++| -+|+++....+-|.+.++.++.++++++..+++.||+++.|... .+.
T Consensus 255 ~LEr~Lrd~I~~gqP~Thrp~kki~iivegiysmEg~iv~Lp~vvalkkkykayl~lDEAHSiGA~g~tGrgvce~~g~d 334 (519)
T KOG1357|consen 255 GLERLLRDAIVYGQPKTHRPWKKILICVEGIYSMEGTIVDLPEVVALKKKYKAYLYLDEAHSIGAMGATGRGVCEYFGVD 334 (519)
T ss_pred HHHHHHHHHHhcCCCCcCCcchheeeeeccceeccCeecccHHHHHhhccccEEEEeeccccccccCCCCcceeeccCCC
Confidence 9988875 222 26667788889999999999999999999999999999876653 223
Q ss_pred CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh--hhcCCCCChhhHHHHHhcCC---------cHHHHHHH
Q 016612 188 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLRGVK---------TMALRVEK 256 (386)
Q Consensus 188 ~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~ 256 (386)
..+.||+.+++.|++++ + +|++.++ +++.+.++.-. ...+..++++.+...+.++. .-..+.++
T Consensus 335 ~~dvDImMGtftKSfga-~---GGyiags-k~lid~lrt~s~~~~yat~~sppvaqq~~ssl~~i~G~dgt~~g~~k~~~ 409 (519)
T KOG1357|consen 335 PEDVDIMMGTFTKSFGA-A---GGYIAGS-KELIDYLRTPSPSALYATSLSPPVAQQILTSVKHIMGEDGTNRGRQKIER 409 (519)
T ss_pred chhheeecceehhhccc-c---cceecCc-HHHHhhhccCCCceeecccCChHHHHHHHHHHHhhcCCCcccHHHHHHHH
Confidence 34678999999999954 3 5888887 44555443221 12234555554444433332 22455566
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLIS 336 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~ 336 (386)
+.+|...++..+++.. ++.-+-+ .++++.+.+-.+.....+-+++....+.+-. +.
T Consensus 410 l~~ns~yfr~~l~~~g----fivyG~~--------------dSpVvplll~~~~k~~~f~r~~l~~nigvVv------vg 465 (519)
T KOG1357|consen 410 LAENSRYFRWELQKMG----FIVYGNN--------------DSPVVPLLLYGPAKIVAFSREMLERNIGVVV------VG 465 (519)
T ss_pred HHhhhHHHHHhhhcCc----EEEecCC--------------CCCcceeeecCcccccHHHHHHHhcCceEEE------Ee
Confidence 6666666655555432 2221211 1233444332222233333344333333221 22
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 337 MPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 337 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+|+.. +-++.+|++.+..++.+.++.+.+++++.
T Consensus 466 fPatp--------------l~e~r~R~c~Sa~ht~e~ld~~l~~i~~~ 499 (519)
T KOG1357|consen 466 FPATP--------------LLESRARFCLSASHTKEDLDRALEVIDRV 499 (519)
T ss_pred CCCch--------------HHHhHHHhhhcccccHHHHHHHHHHHhhh
Confidence 34321 11344899998877777777777766554
No 300
>COG3844 Kynureninase [Amino acid transport and metabolism]
Probab=99.65 E-value=5e-14 Score=121.31 Aligned_cols=287 Identities=18% Similarity=0.183 Sum_probs=179.3
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcHHH-HHH-HHHHhc--CCCCEEEecCCC-CCcHHHHHhhhcccCCcEEEEeCCCCH
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSGMA-ALA-AVTHLL--GTGEEIVAGDDL-YGGTDRLLSRVTPKTGVVVKRVNTCDL 129 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~gt~-al~-~~~~~~--~~g~~Vlv~~~~-~~~~~~~~~~~~~~~g~~~~~v~~~d~ 129 (386)
+-+.+-.+++.+.|+. .+++++.+|+ .++ .+.+.+ .+|+.|++++-. |+.-..+....+...+.....--.+.+
T Consensus 77 lp~~lgdklApLiGA~~~Evvv~dtts~nl~k~L~aalr~~~~r~vIv~E~~~fpTdly~a~g~~~~~~~~~~~~~~~~P 156 (407)
T COG3844 77 LPERLGDKLAPLIGARAGEVVVTDTTSINLFKVLAAALRPQEGRRVIVSEGDNFPTDLYIAEGLADLLGIGYDLEGVIAP 156 (407)
T ss_pred chhHHHHHhhhhhcCCCCceEEeCCcchHHHHHHHHHhccCCCceEEeecCCCCCcchhhhcchhhhhcccccceeeeCh
Confidence 3456777888888887 6777777764 465 444443 458899988764 333333334444444433222223477
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCC-CCCccEEEeccccccccCCCc
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL-ELGADIVMHSATKFIAGHSDV 208 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~-~~~~di~~~S~sK~~~g~~g~ 208 (386)
+++++++++++.+|++++++.-||...++.+|.+++|++|++++.|-+|+.|..+-.+ ..|+|+-+++.+|+++|.+|-
T Consensus 157 ~~~~~~~~dd~AvV~L~~V~y~TGql~dm~aiT~~AH~~galv~wDLAHsaGavp~~Lh~~gaDfaigcsyKYLNgGPGa 236 (407)
T COG3844 157 RALEEAITDDVAVVLLSHVNYKTGQLLDMRAITALAHQHGALVGWDLAHSAGAVPVDLHAAGADFAIGCSYKYLNGGPGA 236 (407)
T ss_pred HHHHHhhccceEEEEeccccccccceeeHHHHHHHHHhcCceEEeehhcccCCcceeecccCCCeeeeeeceeccCCCCC
Confidence 8999999999999999999999999999999999999999999999999999876333 468999999999999977775
Q ss_pred eEEEEEEcChhHHHHHHHh----------------hhhcC-----CCCChhhHHHH-HhcCCc-----HHHHHHHHHHHH
Q 016612 209 MAGVLAVKGERLAKELYFL----------------QNAEG-----SGLAPFDCWIC-LRGVKT-----MALRVEKQQDNA 261 (386)
Q Consensus 209 ~~G~i~~~~~~~~~~~~~~----------------~~~~~-----~~~~~~~~~~~-~~~~~~-----~~~~~~~~~~~~ 261 (386)
.++++..++........+ ....+ ++..+...... ..+++. +.+-+++....+
T Consensus 237 -pa~l~v~~~h~e~~~~~lsgW~gha~pf~m~~~y~p~~ga~rf~~gt~~V~s~aal~~aLDifa~~~i~~lR~kSlaLT 315 (407)
T COG3844 237 -PAGLFVAPRHRERSWPPLSGWWGHARPFAMEEVYAPGPGARRFLCGTQPVLSLAALEGALDIFADVDITELRKKSLALT 315 (407)
T ss_pred -ceeEEeccccccccccccccccCCCCcchhhhccCcCccccceeeCCcchhhhHHHhhhhhhhhhcCHHHHHHhhhHHH
Confidence 455555444322211110 00000 12222222222 222321 233333344444
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhh-ccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYS-QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
..+.+.++.+..- -+..+..+ ....+|.-+++..++ ..++++.|..+|+..- +
T Consensus 316 d~fieLvEa~~~~-----------~~l~l~tPr~~~~rGsqvS~~hp~---~~~V~qaLi~rGVigD---~--------- 369 (407)
T COG3844 316 DYFIELVEARCEY-----------YGLTLVTPRAHEERGSQVSLYHPH---GYQVMQALIDRGVIGD---F--------- 369 (407)
T ss_pred HHHHHHHHhcccc-----------CCcEEeccchhhhccceeeEecCc---HHHHHHHHHHcCcccc---c---------
Confidence 4455555543210 01111111 112356778887764 5567777777777422 1
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHHHHhcC
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~~l~~~ 384 (386)
..++.+|+.++ ..|+-..++.|.++|++.
T Consensus 370 ---------------R~P~vlRfgftPlY~~~~DVw~AV~~L~evL~t~ 403 (407)
T COG3844 370 ---------------REPDVLRFGFTPLYVSFVDVWDAVDALEEVLDTL 403 (407)
T ss_pred ---------------cCCCeeeecCccceechhHHHHHHHHHHHHHHhh
Confidence 12566999985 499999999999999864
No 301
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=99.65 E-value=7.5e-14 Score=122.87 Aligned_cols=253 Identities=22% Similarity=0.279 Sum_probs=148.9
Q ss_pred hHHHHHHHHHhhcCCCceEE---eCcHHHHHH-HHHHhcCCCCEEE-ecCCCCCcHHHHH------hhhcccCCcEEEEe
Q 016612 56 TRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIV-AGDDLYGGTDRLL------SRVTPKTGVVVKRV 124 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~---~~~gt~al~-~~~~~~~~g~~Vl-v~~~~~~~~~~~~------~~~~~~~g~~~~~v 124 (386)
.|+.+++-.+++||.++.++ +.|||+||. ++.++++|||+.+ +...-|.....++ ...++.+|+.+..+
T Consensus 55 GRd~le~iyA~vfgaE~ALVRpq~vSGTHAi~~~Lfg~LrpGD~ll~~tG~PYDTL~~VIG~~g~~~GSL~e~Gi~Y~~v 134 (403)
T PF06838_consen 55 GRDKLERIYADVFGAEDALVRPQFVSGTHAIALALFGVLRPGDELLSITGKPYDTLEEVIGIRGNGPGSLKEFGIKYREV 134 (403)
T ss_dssp HHHHHHHHHHHHCT-SEEEEETTS-SHHHHHHHHHHHH--TT-EEEESSSS--CCHHHHHTSSSSSSSSTGGGT-EEEE-
T ss_pred cHHHHHHHHHHHhCchhhhhcccccchHHHHHHHHHhcCCCCCeEEEcCCCchhhHHHHhCCCCCCCCChHHhCceeEEE
Confidence 69999999999999999887 469999997 7788999999998 4444565555444 12346788999999
Q ss_pred CCC-----CHHHHHhhhCCCceEEEEeCC----CCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCC-ccCCCCCCcc
Q 016612 125 NTC-----DLDEVASAIGPWTKLVWVESP----TNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPV-LSRPLELGAD 192 (386)
Q Consensus 125 ~~~-----d~~~l~~~~~~~~~~v~~~~~----~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~-~~~~~~~~~d 192 (386)
+.. |.+.++++++++||+|++.-. ..|+=.+.+++++.+++|+. ++++++|.+|+... ...|.+.|+|
T Consensus 135 ~L~~dg~~D~~~i~~~~~~~tk~v~IQRSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEFvE~~EP~~vGAD 214 (403)
T PF06838_consen 135 PLTEDGTIDWEAIKKALKPNTKMVLIQRSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEFVETQEPTEVGAD 214 (403)
T ss_dssp -B-TTSSB-HHHHHHHHHTTEEEEEEE-S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTTTSSS-GGGGT-S
T ss_pred eecCCCCcCHHHHHHhhccCceEEEEecCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCcceeccccCccccchh
Confidence 864 899999999999999998622 22222223566677777664 89999999998765 3457788999
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcC----CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG----SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 268 (386)
++.+|+-|..+|.--.-+|+++++. ++.+......+..| .+.+......+.+++-....-..+-.+-+......+
T Consensus 215 l~aGSLIKNpGGgiAptGGYIaGr~-~lVe~~a~RLTaPGiG~e~G~t~~~~R~~~QGlFlAP~vV~eAlKgaif~A~~f 293 (403)
T PF06838_consen 215 LMAGSLIKNPGGGIAPTGGYIAGRK-DLVERAAYRLTAPGIGKEVGATLGTNRLMFQGLFLAPHVVGEALKGAIFAAALF 293 (403)
T ss_dssp EEEEETTSGGGTTT-SS-EEEEESH-HHHHHHHHHHS-TTTGGGSS--TTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred heeccceeCCCCCccCcCCEEechH-HHHHHHHhhhcCCccccccccCcchHHHHHhHHhhchHHHHHHHHHHHHHHHHH
Confidence 9999999988753333589999984 45554433333222 223333334444443322333333344455555566
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcce
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 323 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 323 (386)
++.. .+..|... . +..--+-++.+++++....|++......
T Consensus 294 e~lG---------~~v~P~~~----~-~R~DiIQai~l~~~e~l~~FC~~iQ~~s 334 (403)
T PF06838_consen 294 EKLG---------FEVSPKPD----D-PRSDIIQAIELGSPEKLIAFCQGIQAAS 334 (403)
T ss_dssp HHTT----------EEES-TT----S---SSS-EEEE-SSHHHHHHHHHHHHHTS
T ss_pred HHcC---------CcCCCCCC----C-CCCceEEEEECCCHHHHHHHHHHHHhcC
Confidence 6553 11111110 1 1123456788888888888888765543
No 302
>PLN02263 serine decarboxylase
Probab=99.64 E-value=2.2e-13 Score=127.45 Aligned_cols=209 Identities=16% Similarity=0.174 Sum_probs=148.3
Q ss_pred hHHHHHHHHHhhcCCC----ceEEeCcHHHHH-HHHHHh--cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD----RALCFTSGMAAL-AAVTHL--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~----~~i~~~~gt~al-~~~~~~--~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
+-.++-+++++++|.+ ..+++++||++. .++... ..+...+++++..|.+.. +++...|++++.++.+
T Consensus 134 ~E~~Vi~wla~L~g~p~~~~~G~vtsGGTEaNL~Al~aARe~~~~~vvy~S~~aH~Sv~----KAa~llgi~~~~Vp~d~ 209 (470)
T PLN02263 134 FEVGVLDWFARLWEIEKNEYWGYITNCGTEGNLHGILVGREVFPDGILYASRESHYSVF----KAARMYRMECVKVDTLV 209 (470)
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEeCcHHHHHHHHHHHHHhhcCCcEEEEcCCccHHHH----HHHHhcCCcceEeccCC
Confidence 5667788899999864 268889999874 555443 224457889999998885 6677888888888864
Q ss_pred ----CHHHHHhhhCCC---ceEEEEeCCCCCCcccccHHHHHHHHHHcCC-----EEEEeCCCCCCCcc---C----CCC
Q 016612 128 ----DLDEVASAIGPW---TKLVWVESPTNPRQQICDIRKIAEMAHAHGA-----LLLVDNSIMSPVLS---R----PLE 188 (386)
Q Consensus 128 ----d~~~l~~~~~~~---~~~v~~~~~~nptG~~~~l~~i~~la~~~~~-----~li~D~a~~~~~~~---~----~~~ 188 (386)
|+++|++++.++ +-+|+.+..+.++|.+.|+++|.++|+++|+ ++++|++++....+ . ...
T Consensus 210 ~g~mD~~aL~~aI~~d~~~P~iVvataGTT~~GAiDpi~eIa~i~~~~g~~~~~iwlHVDAA~GG~~lPf~~~~~~~df~ 289 (470)
T PLN02263 210 SGEIDCADFKAKLLANKDKPAIINVNIGTTVKGAVDDLDLVIKTLEECGFSQDRFYIHCDGALFGLMMPFVKRAPKVTFK 289 (470)
T ss_pred CCcCcHHHHHHHHHhCCCCcEEEEEEecCCCCcCCCCHHHHHHHHHHcCCccCCeeEEEeccchhhHhhhcccccccCCC
Confidence 899999888643 4567778899999999999999999999997 99999999754432 1 111
Q ss_pred CCccEEEeccccccccCCCceEEEEEEcChhHHHHH----HHhhh----hcCC-C-CChhhHHHHHh--cCCcHHHHHHH
Q 016612 189 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL----YFLQN----AEGS-G-LAPFDCWICLR--GVKTMALRVEK 256 (386)
Q Consensus 189 ~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~----~~~~~----~~~~-~-~~~~~~~~~~~--~~~~~~~~~~~ 256 (386)
..+|-+..++|||++.|-+ +|+++.+++.+ +.+ ..+.. ..++ . ......|+.++ +.+.+..+.++
T Consensus 290 ~~vDSIsvD~HK~l~~P~~--cgvll~R~~~~-~~~~~~~~Yl~~~d~ti~gSR~g~~al~lW~~L~~~G~~G~~~~i~~ 366 (470)
T PLN02263 290 KPIGSVSVSGHKFVGCPMP--CGVQITRMEHI-NVLSSNVEYLASRDATIMGSRNGHAPIFLWYTLNRKGYRGFQKEVQK 366 (470)
T ss_pred cCccEEEECCccccCCCcC--EEEEEEehhhH-hhhccChHhhCCCCCCcCCCCCcHHHHHHHHHHHHhCHHHHHHHHHH
Confidence 2478999999999988876 89998886433 211 11111 1111 1 12344455544 34556677777
Q ss_pred HHHHHHHHHHHHhhC
Q 016612 257 QQDNAQKIAEFLASH 271 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~ 271 (386)
..+.++.+.+.+++.
T Consensus 367 ~~~~A~~l~~~l~~~ 381 (470)
T PLN02263 367 CLRNAHYLKDRLREA 381 (470)
T ss_pred HHHHHHHHHHHHHhC
Confidence 778888888888765
No 303
>PRK00062 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.63 E-value=1.5e-14 Score=137.25 Aligned_cols=321 Identities=16% Similarity=0.127 Sum_probs=186.8
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH 88 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~~ 88 (386)
+.+++..+ +.++|..+|.+.++..... .. ....| ...+...++.+.+.+++ +.+..++++||++|+...+.
T Consensus 51 ~~lD~~~g~~~~~lGh~~p~i~~a~~~~~---~~-~~~~~--~~~~~~~~la~~L~~~~~~~~~v~~~~sGseA~e~Aik 124 (426)
T PRK00062 51 EYIDYVGSWGPMILGHAHPEVVEAVIEAA---EK-GLSFG--APTELEVELAELVIELVPSIEMVRMVNSGTEATMSAIR 124 (426)
T ss_pred EEEEcccchhhhhcCCCCHHHHHHHHHHH---Hh-CCcCC--CCCHHHHHHHHHHHHhCCCCCEEEEecCHHHHHHHHHH
Confidence 44555433 3557777766665322111 11 11111 13356667888888765 45678889999999864433
Q ss_pred h---cCCCCEEEecCCCCCcHHHHHhhhcc---------c-CCc------EEEEeCCCCHHHHHhhhC---CCceEEEEe
Q 016612 89 L---LGTGEEIVAGDDLYGGTDRLLSRVTP---------K-TGV------VVKRVNTCDLDEVASAIG---PWTKLVWVE 146 (386)
Q Consensus 89 ~---~~~g~~Vlv~~~~~~~~~~~~~~~~~---------~-~g~------~~~~v~~~d~~~l~~~~~---~~~~~v~~~ 146 (386)
+ ...++.|+..++.|++.......... . .+. ....++..|++++++.+. +++++|+++
T Consensus 125 ~a~~~~g~~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~~aaiivE 204 (426)
T PRK00062 125 LARGYTGRDKIIKFEGCYHGHADSLLVKAGSGAATLGLPDSPGVPEDFAKHTLTAPYNDLEAVEELFEEYGDEIAAVIVE 204 (426)
T ss_pred HHHHHhCCCeEEEEcCccCCchhhhhhccCccccccCCCCCCCCCcccccceEEcCCCCHHHHHHHHHhCCCcEEEEEEe
Confidence 2 33467899999988886422111100 0 011 123344568889988774 478899999
Q ss_pred CCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcC
Q 016612 147 SPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (386)
Q Consensus 147 ~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~ 217 (386)
.....+|.+.+ +++|.++|++||+++|+||++...... +......|+ .+++|.+++ |+++|+++++
T Consensus 205 pv~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~G~r~g~~~~~~~~~~~pDi--~~~gK~l~~--G~p~ga~~~~- 279 (426)
T PRK00062 205 PVAGNMGVVPPKPGFLEGLRELCDEHGALLIFDEVMTGFRVALGGAQGYYGVTPDL--TTLGKIIGG--GLPVGAFGGR- 279 (426)
T ss_pred CCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeechhccccCCccHHHHhCCCcch--HhhhhHhhC--CCcceeeeEH-
Confidence 77777899987 899999999999999999998622111 111223565 478999963 5678888876
Q ss_pred hhHHHHHHHh---hhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhh
Q 016612 218 ERLAKELYFL---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 292 (386)
Q Consensus 218 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~ 292 (386)
+++.+.+... ......+.++..++++...++.+.. ..++..+..+.+.+.+++.. +.++..
T Consensus 280 ~~i~~~~~~~~~~~~~~T~~~~p~~~aaa~a~L~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~---- 345 (426)
T PRK00062 280 REIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLKLLKEPGFYEELEALTKRLAEGLKEAA----------KKAGIP---- 345 (426)
T ss_pred HHHHHhhccCCCceecccCcCCHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHH----------HHcCCc----
Confidence 5566655321 1112234566666665555543322 22333333444444443210 000000
Q ss_pred hccCCCCceEEEEeCC-------------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCC
Q 016612 293 SQAKGAGSVLSFLTGS-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTED 359 (386)
Q Consensus 293 ~~~~~~~~~~~~~~~~-------------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 359 (386)
...++.|.++.+.+.+ ......+.+.+..+|+.+.+... +
T Consensus 346 ~~vrg~G~~~~i~l~~~~~~~~~~~~~~~~~~~~~i~~~l~~~Gv~v~~~~~---------------------------~ 398 (426)
T PRK00062 346 LTVNRVGSMFGLFFTDEPVTNYADAKKSDTERFARFFHAMLDEGVYLAPSQF---------------------------E 398 (426)
T ss_pred eEEEEecceEEEEEecCCCcchhhhccccHHHHHHHHHHHHHCCeEeecCCc---------------------------C
Confidence 0124567888887742 13346788888888886544221 1
Q ss_pred eEEEE--eccCChHHHHHHHHHHHhcC
Q 016612 360 LVRIS--VGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 360 ~iRis--~~~~~~~~~i~~l~~~l~~~ 384 (386)
.+|++ ++.++++++++.+.+++++.
T Consensus 399 ~~~~~~~~t~~ei~~~~~~l~~~l~~~ 425 (426)
T PRK00062 399 AGFVSAAHTDEDIEKTLEAARKAFAAL 425 (426)
T ss_pred ceeeeccCCHHHHHHHHHHHHHHHHhh
Confidence 13443 45688999999999988753
No 304
>KOG0258 consensus Alanine aminotransferase [Amino acid transport and metabolism]
Probab=99.63 E-value=1.2e-14 Score=127.78 Aligned_cols=166 Identities=20% Similarity=0.241 Sum_probs=121.4
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHHHHHhc--CCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGM-AALAAVTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~~~~~~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
-.|+.+ |.+ .|+.+.+.+.+.-|.. +.|..|+|+ .|+..++.++ .+++.|++|-|-|+-|.. .....|
T Consensus 107 GaYS~SqGv~~vR~~VA~~I~rRDG~p~~p~dI~LT~GAS~ai~~il~l~~~~~~~GvliPiPQYPLYsA----ti~l~~ 182 (475)
T KOG0258|consen 107 GAYSDSQGVPGVRKHVAEFIERRDGIPADPEDIFLTTGASPAIRSILSLLIAGKKTGVLIPIPQYPLYSA----TISLLG 182 (475)
T ss_pred cccccccCChhHHHHHHHHHHhccCCCCCHHHeeecCCCcHHHHHHHHHHhcCCCCceEeecCCCchhHH----HHHHhC
Confidence 358888 888 7999999999988742 455556664 8888776643 567889999999988752 233444
Q ss_pred cEEEEeCC-------CCHHHHHhhhC-----CCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 119 VVVKRVNT-------CDLDEVASAIG-----PWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 119 ~~~~~v~~-------~d~~~l~~~~~-----~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
...+.+-. .|.++|++.++ -+++++++.||.||||.+. .+++|..+|.+++++++.||+|....+
T Consensus 183 ~~~v~YyLdEe~~W~ld~~el~~~~~eA~k~i~~r~lvvINPGNPTGqvls~e~ie~i~~fa~~~~l~llaDEVYQ~Nvy 262 (475)
T KOG0258|consen 183 GTQVPYYLDEESNWSLDVAELERSVDEARKGINPRALVVINPGNPTGQVLSEENIEGIICFAAEEGLVLLADEVYQDNVY 262 (475)
T ss_pred CcccceeeccccCCCCCHHHHHHHHHHHhccCCceEEEEECCCCccchhhcHHHHHHHHHHHHHcCeEEechHHHHhhcc
Confidence 44333322 28888887765 2788999999999999997 489999999999999999999753322
Q ss_pred cCC-------------CCCCc----cEEEeccccccccCCCceEEEEEEc
Q 016612 184 SRP-------------LELGA----DIVMHSATKFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 184 ~~~-------------~~~~~----di~~~S~sK~~~g~~g~~~G~i~~~ 216 (386)
... ..... -+.+.|.||.+.|-.|-|+|++-.-
T Consensus 263 ~~~skFhSfKKvl~emg~~~~~~v~L~SfhSvSKGy~gECG~RGGYmEv~ 312 (475)
T KOG0258|consen 263 TTGSKFHSFKKVLHEMGNPYPDNVSLASFHSVSKGYMGECGQRGGYMESL 312 (475)
T ss_pred CCCcchHhHHHHHHHhcCccCCceEEEeeecccccceeeecccCCeeecc
Confidence 210 01111 3667789999999899999997654
No 305
>PLN02414 glycine dehydrogenase (decarboxylating)
Probab=99.63 E-value=4.1e-14 Score=143.34 Aligned_cols=154 Identities=23% Similarity=0.237 Sum_probs=117.6
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHh-cCC--CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCH
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL-LGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDL 129 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~-~~~--g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~ 129 (386)
...+.+..+++++|.+ +.-++.++|++..++ ++. +++ +|+|++++..|+.+..++...++..|++++.++..+.
T Consensus 149 al~~~Qt~ia~LtG~~~anaSL~d~aTAaaea~~~a~~~~~g~~~~VlVs~~~hP~~~~v~~t~a~~~GieV~~v~~~~~ 228 (993)
T PLN02414 149 SLLNYQTMITDLTGLPMSNASLLDEGTAAAEAMAMCNNILKGKKKKFLIASNCHPQTIDVCQTRADGLGLEVVVADEKDF 228 (993)
T ss_pred HHHHHHHHHHHHhCCChhhEeecCChHHHHHHHHHHHhcccCCCCEEEEcCccCHhHHHHHHHhhhhcCCEEEEecchhh
Confidence 3666788899999998 566677777777644 443 454 4789999999999998888888999999999987542
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC--ccCCCCCCccEEEecccccc-----
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHSATKFI----- 202 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~~di~~~S~sK~~----- 202 (386)
+ ...+.+..+++..|++ +|.+.|+++|.++||++|+++++ .++..+. +.++.++|+||++++.+||.
T Consensus 229 ~----~~~~~v~~vlvq~P~~-~G~v~dv~~I~~~ah~~GaL~iV-aad~lal~~l~~pge~GADi~vgsgqKwg~P~G~ 302 (993)
T PLN02414 229 D----YSSGDVCGVLVQYPAT-DGEVLDYAEFVKNAHANGVKVVM-ATDLLALTMLKPPGEWGADIVVGSAQRFGVPMGY 302 (993)
T ss_pred c----cccCceEEEEEecCCC-CeEEcCHHHHHHHHHHcCCEEEE-EECHHHhcCCCCHhhccCcEEEECCCccccCCCC
Confidence 2 1233455555555554 89999999999999999999999 6554433 33477889999999999997
Q ss_pred ccCCCceEEEEEEcCh
Q 016612 203 AGHSDVMAGVLAVKGE 218 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~ 218 (386)
+|| ..|+++++++
T Consensus 303 GGP---~aGflavr~~ 315 (993)
T PLN02414 303 GGP---HAAFLATSQE 315 (993)
T ss_pred CCC---CeeEEEECHH
Confidence 343 3799999864
No 306
>COG0076 GadB Glutamate decarboxylase and related PLP-dependent proteins [Amino acid transport and metabolism]
Probab=99.63 E-value=1.9e-14 Score=135.62 Aligned_cols=211 Identities=22% Similarity=0.218 Sum_probs=148.8
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCcHHHHHH-HHHHh----cC-C---C------CEEEecCCCCCcHHHHHhhhcccC
Q 016612 56 TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHL----LG-T---G------EEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~gt~al~-~~~~~----~~-~---g------~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
+-+++-.+++++++.+ ...++++||+++. ++++. ++ . + .+|+++...|.+.. +.+...
T Consensus 102 ~E~~~v~~l~~l~~~~~~~~G~~t~GgTean~lal~aar~~~~~~~~~~~~~~~~~P~ii~s~~aH~s~~----Kaa~~l 177 (460)
T COG0076 102 LEERVVNMLSDLLGAPEEASGTFTSGGTEANLLALLAARERWRKRALAESGKPGGKPNIVCSETAHFSFE----KAARYL 177 (460)
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEcChHHHHHHHHHHHHHHHHHHhhhcccccCCCCeEEecCcchhHHH----HHHHHh
Confidence 4566777888888874 4788999998853 44331 10 1 1 16899999998885 667778
Q ss_pred CcEEEEeCCC------CHHHHHhhhCCCceE--EEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc--CCC
Q 016612 118 GVVVKRVNTC------DLDEVASAIGPWTKL--VWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS--RPL 187 (386)
Q Consensus 118 g~~~~~v~~~------d~~~l~~~~~~~~~~--v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~--~~~ 187 (386)
|++.+.++.. |++++++++++++.. |+.+..+.++|.+.|+++|.++|+++++++++|+|++....+ +..
T Consensus 178 G~~~~~v~~~~~~~~id~~~l~~~i~~~t~~g~vV~~aGtT~~G~iDdi~~ia~ia~~~~i~lHVDAA~GG~~~pf~~~~ 257 (460)
T COG0076 178 GLGLRRVPTVPTDYRIDVDALEEAIDENTIGGVVVGTAGTTDTGSIDDIEELADIAEEYGIWLHVDAAFGGFLLPFLEPD 257 (460)
T ss_pred CCCceeEEeccCccccCHHHHHHHHHhhccCceEEEEecCCCCCccCCHHHHHHHHHHcCCcEEEEccccceeecccCcc
Confidence 8777766643 899999999987776 888999999999999999999999999999999999865542 111
Q ss_pred ------CCCccEEEeccccccccCCCceEEEEEEcChh-HHHHHHHhhhhcC-----------CCC--ChhhHHHHHh--
Q 016612 188 ------ELGADIVMHSATKFIAGHSDVMAGVLAVKGER-LAKELYFLQNAEG-----------SGL--APFDCWICLR-- 245 (386)
Q Consensus 188 ------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~-~~~~~~~~~~~~~-----------~~~--~~~~~~~~~~-- 245 (386)
-.++|.++.|+||++..|.| +|+++.++++ +.+.........+ +.. ....+|+...
T Consensus 258 ~~~~f~l~~vdSIt~d~HK~g~aP~~--~G~il~rd~e~l~~~~~~~~~yl~~~~~~~~ti~~sr~~~~~~~~~~~l~~l 335 (460)
T COG0076 258 GRWDFGLEGVDSITVDGHKYGLAPIG--CGVVLFRDEEALRRILIFADYYLPGGGIPNFTILGSRPGRQALALYANLRRL 335 (460)
T ss_pred chhhcCCCCceEEEECcccccCCCCC--ceEEEEECHHHhhhhhhcccccCCCCCcCceeEeeccchHHHHHHHHHHHHh
Confidence 12678999999999998887 7999998873 4443332221111 111 1233344333
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhCC
Q 016612 246 GVKTMALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
+.+.+....++..++++++.+.+++.+
T Consensus 336 G~eGy~~l~~~~~~~a~~la~~l~~~~ 362 (460)
T COG0076 336 GREGYRKLLDRTLELARYLAEELEKLG 362 (460)
T ss_pred CHhHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 334556666666677788888877764
No 307
>PRK09264 diaminobutyrate--2-oxoglutarate aminotransferase; Validated
Probab=99.63 E-value=1.8e-14 Score=136.69 Aligned_cols=320 Identities=15% Similarity=0.116 Sum_probs=177.1
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccC-CCCchHHHHHHHHHhhc----CCC-ceEEe-CcHHHHHHHHHHh---
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTR-SGNPTRDALESLLAKLD----KAD-RALCF-TSGMAALAAVTHL--- 89 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~-~g~~~~~~l~~~l~~~~----g~~-~~i~~-~~gt~al~~~~~~--- 89 (386)
+..+|..+|++.++....... ..+.... ..++...++.+.+.+.+ +.+ ...++ +||++|+.+.+.+
T Consensus 50 ~~~lGh~~p~v~~ai~~ql~~----~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~~~~~~f~~~sGseA~e~AlklAr~ 125 (425)
T PRK09264 50 ALNYGHNNPVLKQALIDYLQR----DGITHGLDMHTTAKREFLETFEETILKPRGLDYKVQFTGPTGTNAVEAALKLARK 125 (425)
T ss_pred hccCCCCCHHHHHHHHHHHHh----cccccccccCcHHHHHHHHHHHHhhcCCcCCCceEEEeCCCHHHHHHHHHHHHHH
Confidence 345777777776543221111 0111111 12345666777777753 122 23444 6999998644332
Q ss_pred cCCCCEEEecCCCCCcHHHHHhhhc------ccCC---cEEEEeCC--------CCHHHHHhhhC------CCceEEEEe
Q 016612 90 LGTGEEIVAGDDLYGGTDRLLSRVT------PKTG---VVVKRVNT--------CDLDEVASAIG------PWTKLVWVE 146 (386)
Q Consensus 90 ~~~g~~Vlv~~~~~~~~~~~~~~~~------~~~g---~~~~~v~~--------~d~~~l~~~~~------~~~~~v~~~ 146 (386)
.....+|+.-...|++.......+. ..++ ..+..++. .|++++++.+. +++.+|+++
T Consensus 126 ~tgr~~ii~~~~~yHG~t~~~ls~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~~l~~~~~~~~~~aavi~E 205 (425)
T PRK09264 126 VTGRTNIVAFTNGFHGMTLGSLAVTGNSHKRQGAGVPLNNVTRMPYDGYFGGDVDTLAYLEKLLEDSSSGVDLPAAVIVE 205 (425)
T ss_pred hcCCCeEEEECCccCCccHHHHHhcCCcccccCCCCCCCCeEEeCCCCccccchhHHHHHHHHHHhccCCCCceEEEEEe
Confidence 3344677777777766532111111 1111 12344443 26677887774 357899999
Q ss_pred CCCCCCcccc----cHHHHHHHHHHcCCEEEEeCCCCC-C---Ccc--CCCCCCccEEEeccccccccCCCceEEEEEEc
Q 016612 147 SPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS-P---VLS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 147 ~~~nptG~~~----~l~~i~~la~~~~~~li~D~a~~~-~---~~~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~ 216 (386)
......|.+. .+++|.++|++||+++|+||+++. | ... .......|++ +++|.++ +.|+++|+++++
T Consensus 206 pv~g~~G~~~~~~~~l~~l~~lc~~~g~llI~DEV~tG~GrtG~~~~~~~~~v~PDi~--t~~K~l~-~~G~pigav~~~ 282 (425)
T PRK09264 206 TVQGEGGINVASAEWLQRLAKLCRKHDILLIVDDIQAGCGRTGTFFSFERAGITPDIV--TLSKSIS-GYGLPMALVLIK 282 (425)
T ss_pred cccCCCCCcCCCHHHHHHHHHHHHHcCcEEEEechhhCCccccHHHHHhhcCCCCCEE--EeccccC-CCccceEEEEEc
Confidence 8888777754 399999999999999999999852 2 111 1223457876 4589984 446789999987
Q ss_pred ChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccC
Q 016612 217 GERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 296 (386)
Q Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 296 (386)
++ +. .+...........++....+....+..+ ...+...++.+.+.+++.+.-. . +.. .++.. + .+.+
T Consensus 283 ~~-i~-~~~~~~~~~T~~gnp~~~aaa~a~l~~~-~~~~~l~~~~~~~g~~l~~~l~--~-l~~---~~~~~-~--~~vr 350 (425)
T PRK09264 283 PE-LD-VWKPGEHNGTFRGNNLAFVTATAALEEY-WSDDAFEKEVKAKGELVRERLE--E-IAA---KYPGL-G--AEVR 350 (425)
T ss_pred hh-hh-ccCCCccCCCCCCCHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHHHHHHHH--H-HHH---hCCCc-e--ecce
Confidence 44 42 2211111112223344444433433211 1112344444444444432110 0 000 11110 0 1124
Q ss_pred CCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHH
Q 016612 297 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVND 372 (386)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~ 372 (386)
+.|.++++.+++......+.+.+...|+.+..... ....||+++. .+++++
T Consensus 351 g~Gl~~~i~l~~~~~~~~l~~~~~~~Gv~~~~~~~-------------------------~~~~lr~~p~l~~t~~ei~~ 405 (425)
T PRK09264 351 GRGMMQGIDFGDGELAGKIAAEAFENGLIIETSGP-------------------------EDEVVKLLPPLTIDEEELEE 405 (425)
T ss_pred ecccEEEEEecChHHHHHHHHHHHHCCCEEeccCC-------------------------CCCEEEEeCCCCCCHHHHHH
Confidence 56788899997766677888888888886543221 1244888865 588888
Q ss_pred HHHHHHHHHhc
Q 016612 373 LISDLDKALRT 383 (386)
Q Consensus 373 ~i~~l~~~l~~ 383 (386)
.++.|.+++++
T Consensus 406 ~~~~l~~~l~~ 416 (425)
T PRK09264 406 GLDILEEAVAE 416 (425)
T ss_pred HHHHHHHHHHH
Confidence 88888888765
No 308
>PRK07986 adenosylmethionine--8-amino-7-oxononanoate transaminase; Validated
Probab=99.61 E-value=1.7e-14 Score=136.08 Aligned_cols=284 Identities=12% Similarity=0.085 Sum_probs=163.5
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---c-----CCCCEEEecCCCCCcHHHHHhhhcc-------c
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---L-----GTGEEIVAGDDLYGGTDRLLSRVTP-------K 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~-----~~g~~Vlv~~~~~~~~~~~~~~~~~-------~ 116 (386)
++...++.+.|.++.+. +...+++||++|+.+.+.+ . ....+|+.-..+|++.......+.. .
T Consensus 85 ~~~~~~la~~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~~~~~g~~r~kii~~~~~yHG~t~~a~s~~~~~~~~~~~ 164 (428)
T PRK07986 85 HPPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEPRQRFLTLRHGYHGDTFGAMSVCDPDNSMHSL 164 (428)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCcEEEEECCCcCCCcHhhhcccCCchhhhhc
Confidence 34566677777776643 4677889999998643331 1 2346788777777664211111100 0
Q ss_pred CC---cEEEEeCC-----------CCHHHHHhhhC---CCceEEEEeCC-CCCCcccc-c---HHHHHHHHHHcCCEEEE
Q 016612 117 TG---VVVKRVNT-----------CDLDEVASAIG---PWTKLVWVESP-TNPRQQIC-D---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 117 ~g---~~~~~v~~-----------~d~~~l~~~~~---~~~~~v~~~~~-~nptG~~~-~---l~~i~~la~~~~~~li~ 174 (386)
++ ..+..++. .|++++++.+. +++.+|+++.. +.-.|.+. + +++|.++|++||+++|+
T Consensus 165 ~~~~~~~~~~~~~p~~~~~~~~~~~d~~~l~~~l~~~~~~iaavi~Epi~~g~gg~~~~~~~~L~~l~~lc~~~g~lLI~ 244 (428)
T PRK07986 165 YKGYLPENLFAPAPQSRFDGEWDERDIAPFARLMAAHRHEIAAVILEPIVQGAGGMRIYHPEWLKRVRKLCDREGILLIA 244 (428)
T ss_pred cCCCCCCCEEECCCCcccchhhHHHHHHHHHHHHHhCCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 00 01122221 25567777774 46789999885 66556543 2 89999999999999999
Q ss_pred eCCCCC-CCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHh-----hhhcCCCCChhhHHH
Q 016612 175 DNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL-----QNAEGSGLAPFDCWI 242 (386)
Q Consensus 175 D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 242 (386)
||++.. |... ......+|+++ ++|.++| | +.+|.++++ +++.+.+... ......+.++...++
T Consensus 245 DEv~tG~GrtG~~fa~~~~gv~PDi~t--~gK~l~g--G~~p~~av~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~aa 319 (428)
T PRK07986 245 DEIATGFGRTGKLFACEHAGIAPDILC--LGKALTG--GTMTLSATLTT-REVAETISNGEAGCFMHGPTFMGNPLACAV 319 (428)
T ss_pred eccccCCccCCCeeeecccCCCCCEEE--echhhhC--CcccCcchhch-HHHHHHhhcCCCCccccCCCCCcCHHHHHH
Confidence 999742 2211 12233568885 7999864 4 346666665 5566555321 112223445666666
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc
Q 016612 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 322 (386)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 322 (386)
+...++.+.. +...++.+.+.+++.+.-. .+..++.+ .+.++.|.++.+.+..+.....+.+.+..+
T Consensus 320 a~a~L~~i~~--~~~~~~~~~~g~~l~~~l~-------~l~~~~~i----~~vRg~Gl~~~ve~~~~~~~~~~~~~l~~~ 386 (428)
T PRK07986 320 ANASLSLLES--GDWQQQVAAIEAQLREELA-------PLRDAPMV----ADVRVLGAIGVVETTRPVNMAALQRFFVEQ 386 (428)
T ss_pred HHHHHHHHHh--CCHHHHHHHHHHHHHHHHH-------HHhcCCCE----EeEeccceEEEEEeCCcccHHHHHHHHHHC
Confidence 6665554322 1234444444444433110 01111111 223677889998886543456777788778
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~ 383 (386)
|+.+.+.+ +.+|+.+ +.++++++++.|.++|++
T Consensus 387 Gl~~~~~g----------------------------~~i~~~Ppl~it~~ei~~~~~~l~~~l~~ 423 (428)
T PRK07986 387 GVWIRPFG----------------------------KLIYLMPPYIILPEQLQRLTAAVNRAVQD 423 (428)
T ss_pred CcEEEecC----------------------------CEEEEeCCCCCCHHHHHHHHHHHHHHHhh
Confidence 87654311 2377765 458888888999888865
No 309
>PRK15029 arginine decarboxylase; Provisional
Probab=99.61 E-value=2.4e-14 Score=141.23 Aligned_cols=156 Identities=16% Similarity=0.188 Sum_probs=124.3
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...+.++.+++.||++...+.++|| .++. ++++++++||.|++++.+|-+..+ .+...|+..+++.+.
T Consensus 206 ~I~eAq~~aA~~fgA~~t~FlvNGST~gn~a~i~a~~~~gd~Vlv~RN~HKSv~~----al~L~ga~Pvyl~P~~~~~Gi 281 (755)
T PRK15029 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQ----GLILTGAKPVYMVPSRNRYGI 281 (755)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeEEEecccccccCC
Confidence 6889999999999999877777776 6665 667799999999999999988874 344778888888642
Q ss_pred ----C-----HHHHHhhhC--CCce--------EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCC-----CCc
Q 016612 128 ----D-----LDEVASAIG--PWTK--------LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS-----PVL 183 (386)
Q Consensus 128 ----d-----~~~l~~~~~--~~~~--------~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~-----~~~ 183 (386)
+ ++++++++. +.++ ++++++|++ .|.+.++++|+++|++++++|++||||+. +.+
T Consensus 282 ~~~i~~~~~~~e~i~~~l~~~p~~k~~~~~~~~avvlt~PTY-~Gv~~di~~I~~~~h~~~~~llvDEAhGah~~F~~~~ 360 (755)
T PRK15029 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNCTY-DGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_pred ccCCCccccCHHHHHHHHHhCchhhhccccCceEEEEECCCC-cceeeCHHHHHHHHHhcCCeEEEECccccccccCccc
Confidence 3 788888874 3334 899999988 69999999999999999999999999863 212
Q ss_pred c--CCC-----C-CCcc-EEEeccccccccCCCceEEEEEEcCh
Q 016612 184 S--RPL-----E-LGAD-IVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 184 ~--~~~-----~-~~~d-i~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
+ ... . .|+| +++.|.||.+.+... ++++..+..
T Consensus 361 p~~sa~~~~~~~~~Gad~~vvqStHKtL~alTQ--aS~LHv~~~ 402 (755)
T PRK15029 361 ADHYAMRGEPGDHNGPTVFATHSTHKLLNALSQ--ASYIHVREG 402 (755)
T ss_pred cccccccccccccCCCceEEEEchhhcccchhh--hhhheeCCC
Confidence 2 122 2 5788 999999999987664 788887544
No 310
>COG0001 HemL Glutamate-1-semialdehyde aminotransferase [Coenzyme metabolism]
Probab=99.60 E-value=4.7e-14 Score=128.11 Aligned_cols=255 Identities=17% Similarity=0.187 Sum_probs=155.2
Q ss_pred HHHHHHHHHhhcCC-CceEEeCcHHHHHH-HHH--HhcCCCCEEEecCCCCCcHHHHH-hhhc---------ccCC----
Q 016612 57 RDALESLLAKLDKA-DRALCFTSGMAALA-AVT--HLLGTGEEIVAGDDLYGGTDRLL-SRVT---------PKTG---- 118 (386)
Q Consensus 57 ~~~l~~~l~~~~g~-~~~i~~~~gt~al~-~~~--~~~~~g~~Vlv~~~~~~~~~~~~-~~~~---------~~~g---- 118 (386)
--++.+.+.+.++. +..-+++|||+|.. ++. +-....|+|+.-+.+|++....+ .++- ...|
T Consensus 95 Ei~~Aell~~~~p~~e~vrfvnSGTEAtmsAiRlARa~TgR~kIikF~G~YHG~~D~~lv~agsg~~t~g~p~s~Gvp~~ 174 (432)
T COG0001 95 EVELAELLIERVPSIEKVRFVNSGTEATMSAIRLARAYTGRDKIIKFEGCYHGHSDSLLVKAGSGAATLGSPSSPGVPAD 174 (432)
T ss_pred HHHHHHHHHHhcCcccEEEEecchhHHHHHHHHHHHHhhCCCeEEEEcCCCCCCccHHHhhcCcCcccCCCCCCCCCChh
Confidence 33455666676665 77889999998854 442 23455688888888887764432 1110 1111
Q ss_pred --cEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-----CCcc
Q 016612 119 --VVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-----PVLS 184 (386)
Q Consensus 119 --~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-----~~~~ 184 (386)
..+..++.+|++.+++++. +++.+|+++.....-|.+.| ++.|.++|+++|+++|.||+... +-.+
T Consensus 175 ~a~~ti~~~yND~~al~~~~~~~g~~IAaVIvEPv~gn~g~i~p~~~Fl~~Lr~lt~e~G~lLI~DEViTGFR~~~gGaq 254 (432)
T COG0001 175 VAKHTLVLPYNDLEALEEAFEEYGDDIAAVIVEPVAGNMGVVPPEPGFLEGLRELTEEHGALLIFDEVITGFRVALGGAQ 254 (432)
T ss_pred hhccEEEecCCCHHHHHHHHHHcCCcEEEEEeccccCCCCCCCCCHHHHHHHHHHHHHcCcEEEEecchhhcccCCcccc
Confidence 1345556679999998886 58899999976555688876 89999999999999999999652 2222
Q ss_pred CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhc---CCCCChhhHHHHHhcCCcHHH---HHHHHH
Q 016612 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---GSGLAPFDCWICLRGVKTMAL---RVEKQQ 258 (386)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~---~~~~~~ 258 (386)
......+|+.+ +.|.++| |+-+|.+.++ +++++.+....... ...-++.+..+....++.+.. -.+++.
T Consensus 255 ~~~gi~PDltt--lGKiIGG--GlP~ga~gGr-~eiM~~~~p~g~vyqaGT~sgnplamaAG~atl~~l~~~~~~y~~l~ 329 (432)
T COG0001 255 GYYGVEPDLTT--LGKIIGG--GLPIGAFGGR-AEIMEQLAPLGPVYQAGTLSGNPLAMAAGLATLEELMTEEGVYERLD 329 (432)
T ss_pred cccCcCcchhh--hhhhhcC--CcceeeeccH-HHHHhhhCCCCCccccCCCCCcHHHHHHHHHHHHHHHhcccHHHHHH
Confidence 33345678875 6999975 6778988886 66877665444322 223344444444444443332 245555
Q ss_pred HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------------CHHhHHHHHhhcCcceec
Q 016612 259 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYFSIT 325 (386)
Q Consensus 259 ~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~~gi~ 325 (386)
+..++|.+-|++.-. ..+++.. ....+.++.+.+. +.+...+++..+...|+.
T Consensus 330 ~~~~~L~~gl~~~~~-----~~g~~~~---------v~~~gsm~~i~F~~~~~~n~~da~~sd~~~~~~~~~~~l~~GV~ 395 (432)
T COG0001 330 ALGERLAEGLRAAAE-----RHGIPLT---------VNRVGSMFGIFFTEEGVRNYADAKRSDVERFAKFFHHLLNRGVY 395 (432)
T ss_pred HHHHHHHHHHHHHHH-----HhCCCeE---------EeeecceEEEEecCCCCCCHHHHHhhchHHHHHHHHHHHhCCcc
Confidence 566666655554210 0011100 0224556666542 223345566677777887
Q ss_pred cCCCC
Q 016612 326 VSFGS 330 (386)
Q Consensus 326 ~~~G~ 330 (386)
+.++.
T Consensus 396 l~ps~ 400 (432)
T COG0001 396 LAPSQ 400 (432)
T ss_pred cCCcc
Confidence 66554
No 311
>PRK05630 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=5.1e-14 Score=132.91 Aligned_cols=283 Identities=13% Similarity=0.127 Sum_probs=162.4
Q ss_pred CchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHh---c--C---C-CCEEEecCCCCCcHH-HHHhhhccc-----
Q 016612 54 NPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHL---L--G---T-GEEIVAGDDLYGGTD-RLLSRVTPK----- 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~---~--~---~-g~~Vlv~~~~~~~~~-~~~~~~~~~----- 116 (386)
++...++.+.+.+..+ .+...+++||++|+.+.+.+ . . + +.+|+.-...|++.. ..+ .+...
T Consensus 82 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~al-s~~~~~~~~~ 160 (422)
T PRK05630 82 HEPAIKLTRKLLNLTDNGLDHVFYSDSGSVSVEVAIKMALQYSKGQGHPERTRLLTWRSGYHGDTFAAM-SVCDPEGGMH 160 (422)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHh-ccCCCccccc
Confidence 3456677777777764 34788889999998633322 1 1 2 356787777776642 221 11110
Q ss_pred --CC---cEEEEeCCC-----C-------HHHHHhhhCCCceEEEEeCC-CCCCccccc----HHHHHHHHHHcCCEEEE
Q 016612 117 --TG---VVVKRVNTC-----D-------LDEVASAIGPWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 117 --~g---~~~~~v~~~-----d-------~~~l~~~~~~~~~~v~~~~~-~nptG~~~~----l~~i~~la~~~~~~li~ 174 (386)
++ .....++.. + .+.+++.+.+++.+|+++.. ....|.+.+ +++|.++|++||+++|+
T Consensus 161 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvi~EPi~qg~gG~~~~~~~~l~~lr~lc~~~g~llI~ 240 (422)
T PRK05630 161 SLWKGTLPEQIFAPAPPVRGSSPQEISEYLRSLELLIDETVAAIIIEPIVQGAGGMRFHDVALIEGVRTLCDKHDILLIA 240 (422)
T ss_pred ccccccCCCCeEcCCCcccCCChHHHHHHHHHHHHHHhhceEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 00 011222211 1 23455556678999999985 776677653 89999999999999999
Q ss_pred eCCCCC-CCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHh------hhhcCCCCChhhHH
Q 016612 175 DNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL------QNAEGSGLAPFDCW 241 (386)
Q Consensus 175 D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~ 241 (386)
||++.. |-.. ......+|++ +++|.++| | ..+|+++++ +++.+.+... ........++....
T Consensus 241 DEv~tG~GrtG~~~a~~~~gv~PDi~--t~gK~l~g--G~~p~~av~~~-~~i~~~~~~~~~~~~~~h~~T~~g~Pla~a 315 (422)
T PRK05630 241 DEIATGFGRTGELFATLAAGVTPDIM--CVGKALTG--GFMSFAATLCT-DKVAQLISTPNGGGALMHGPTFMANPLACA 315 (422)
T ss_pred ecceeCCCcCchhhHHHhcCCCCCee--eeechhhc--Cccccceeecc-HHHHHHHhccCCCCccccCCCCcCCHHHHH
Confidence 999742 2111 1123457888 56999954 2 236777776 4565544311 11222345666666
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc
Q 016612 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 321 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 321 (386)
+....++.+.. +...++...+.+++.+.-. .+...+.+ .+.++.|.++.+.+.++.....+.+.+..
T Consensus 316 aa~aaL~~l~~--~~~~~~~~~~g~~l~~~L~-------~l~~~~~v----~~vRg~Gl~~~ie~~~~~~~~~~~~~~~~ 382 (422)
T PRK05630 316 VAHASLEIIET--GMWRKQVKRIEAELIAGLS-------PLAHLPGV----ADVRVLGAIGVVEMEQPVDMEEATQAAVD 382 (422)
T ss_pred HHHHHHHHHHh--CcHHHHHHHHHHHHHHHHH-------HhhcCCCe----eeeeccccEEEEEECCcccHHHHHHHHHH
Confidence 66555554432 1233344444444433110 01111111 12367899999998554335567777777
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
+|+.+...+ +.+|+.+. .++++++++.|+++|++
T Consensus 383 ~Gl~~~~~g----------------------------~~l~~~PpL~it~~~i~~~~~~l~~al~~ 420 (422)
T PRK05630 383 HGVWLRPFG----------------------------RLVYVMPPYITTSEQIAQICAALAAAVKA 420 (422)
T ss_pred CCeEEEecC----------------------------CEEEEECCccCCHHHHHHHHHHHHHHHhc
Confidence 787653211 23777764 48888888888888764
No 312
>PRK08593 4-aminobutyrate aminotransferase; Provisional
Probab=99.60 E-value=7.9e-14 Score=132.63 Aligned_cols=312 Identities=13% Similarity=0.140 Sum_probs=175.1
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC---CceEEeCcHHHHHHHHHHh---cCCC
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA---DRALCFTSGMAALAAVTHL---LGTG 93 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~~~~~---~~~g 93 (386)
+..+|..+|++.++...... ...........++...++.+.|.+++.. +...+++||++|+.+.+.+ ....
T Consensus 53 ~~~lGH~~p~v~~Ai~~ql~---~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~v~f~~SGseA~e~AiklAr~~tgr 129 (445)
T PRK08593 53 SQNVGHAPPRVVEAIKAQAD---KFIHYTPAYMYHEPLVRLAKKLCELAPGDFEKRVTFGLSGSDANDGIIKFARAYTGR 129 (445)
T ss_pred hhcCCCCCHHHHHHHHHHHH---hccCccccccCCHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHhhCC
Confidence 44577777776664322111 1111111112346677788888888743 3566779999998643332 2334
Q ss_pred CEEEecCCCCCcHH-HHHhhhcc-------cCC---cEEEEeCCCC-----------------HHHHHhhh-----CCCc
Q 016612 94 EEIVAGDDLYGGTD-RLLSRVTP-------KTG---VVVKRVNTCD-----------------LDEVASAI-----GPWT 140 (386)
Q Consensus 94 ~~Vlv~~~~~~~~~-~~~~~~~~-------~~g---~~~~~v~~~d-----------------~~~l~~~~-----~~~~ 140 (386)
.+|+.-+..|++.. ..+ .+.. .++ ..+..++..+ ++++++.+ .+++
T Consensus 130 ~~ii~~~~~YHG~t~~al-s~s~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i 208 (445)
T PRK08593 130 PYIISFTNAYHGSTYGSL-SMSGISLNMRRKYGPLLPGFVHIPFPDKYRGMYEEPDANFVEEYLAPLKEMFEKYLPADEV 208 (445)
T ss_pred CeEEEECCCcCCCcHHHH-hhcCCCcccccCCCCCCCCcEEeCCCccccccccCCcHHHHHHHHHHHHHHHHhhcCCCce
Confidence 56777676666642 222 1111 011 1122233211 13444433 2578
Q ss_pred eEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCceE
Q 016612 141 KLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMA 210 (386)
Q Consensus 141 ~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~ 210 (386)
.+|+++.+....|.+.+ +++|.++|++||+++|+||++. .|... .......|++ +++|.+++ |+.+
T Consensus 209 AavI~EPv~g~gG~~~~~~~yl~~l~~lc~~~g~llI~DEv~tg~GrtG~~~a~~~~gv~pDi~--t~gK~l~~--G~p~ 284 (445)
T PRK08593 209 ACIVIETIQGDGGLLEPVPGYFEALYKFCREHGILFAVDDIQQGLGRTGKWSSISHFNITPDLM--SFGKSLAG--GMPM 284 (445)
T ss_pred EEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhCCCcCchHHHHHhcCCCCCEe--eecccccC--Cccc
Confidence 99999999888888865 9999999999999999999984 32221 1122346776 57999964 5678
Q ss_pred EEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHH----HHHHhhCCCcceEecCCCCCCC
Q 016612 211 GVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKI----AEFLASHPRVKKVNYAGLPEHP 286 (386)
Q Consensus 211 G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l----~~~l~~~~~~~~~~~~~l~~~~ 286 (386)
|+++++ +++.+.+...........++...++.+..++.+.. +...++.+.+ .+.+++... .++.+
T Consensus 285 gav~~~-~~i~~~~~~~~~~~T~~~~pl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~----~~~~v---- 353 (445)
T PRK08593 285 SAIVGR-KEIMESLEAPAHLFTTGANPVSCAAALATIDMIED--ESLLQRSAEKGEYARKRFDQWVS----KYNFV---- 353 (445)
T ss_pred EEEEEc-HHHHhhhccCCCCCCCCCCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHHHHHh----cCCcE----
Confidence 999887 55665553222223345566666655555543322 1233344333 333332210 00111
Q ss_pred chhhhhhccCCCCceEEEEeC--------CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCC
Q 016612 287 GHELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTE 358 (386)
Q Consensus 287 ~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 358 (386)
.+.++.|.++.+.+. +......+.+.+..+|+.+... ..
T Consensus 354 ------~~vrG~Gl~~gi~l~~~~~~~~~~~~~~~~~~~~~~~~Gv~~~~~---------------------------~~ 400 (445)
T PRK08593 354 ------GDVRGYGLSIGIDIVSDKKLKTRDNEAALKICNYCFEHGVVIIAV---------------------------AG 400 (445)
T ss_pred ------EEEeccceEEEEEEecCCCcCCCcHHHHHHHHHHHHHCCeEEecc---------------------------CC
Confidence 122567777777662 2234567777777778754321 12
Q ss_pred CeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 359 DLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 359 ~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
+.+|+++.. ++++++++.+.+++++
T Consensus 401 ~~lr~~p~l~~t~~~id~~~~~l~~~l~~ 429 (445)
T PRK08593 401 NVLRFQPPLVITYEQLDTALNTIEQAFTA 429 (445)
T ss_pred CEEEEECCCccCHHHHHHHHHHHHHHHHH
Confidence 348888754 7777777788777765
No 313
>PRK06541 hypothetical protein; Provisional
Probab=99.60 E-value=1.2e-13 Score=131.82 Aligned_cols=287 Identities=17% Similarity=0.160 Sum_probs=159.9
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---c---C---CCCEEEecCCCCCcHHHHHhhhccc------
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---L---G---TGEEIVAGDDLYGGTDRLLSRVTPK------ 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~---~---~g~~Vlv~~~~~~~~~~~~~~~~~~------ 116 (386)
++...++.+.+.++... +...+++||++|+.+.+.+ . . ...+|+.-...|++...........
T Consensus 94 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~s~~~~~~~~~~ 173 (460)
T PRK06541 94 HPPAIELAERLAALAPGDLNRVFFTTGGSEAVESAWKLAKQYFKLTGKPGKHKVISRAIAYHGTTQGALAITGLPAFKAP 173 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEcCCcHHHHHHHHHHHHHHHHhcCCCCccEEEEEcCcccCcchhhhcCcCChhhccc
Confidence 34556667777776543 4678889999998633321 1 1 2357777666666553211111100
Q ss_pred CC---cEEEEeCCC----------C--------HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHH
Q 016612 117 TG---VVVKRVNTC----------D--------LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 117 ~g---~~~~~v~~~----------d--------~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 167 (386)
++ ..+..++.. + ++.+++.+. .++.+|+++..+++.|.+.+ +++|.++|++
T Consensus 174 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~Aavi~EPv~g~~G~~~~~~~yl~~l~~lc~~ 253 (460)
T PRK06541 174 FEPLVPGGFRVPNTNFYRAPELGDDPEAFGRWAADRIEEAIEFEGPDTVAAVFLEPVQNAGGCFPPPPGYFERVREICDR 253 (460)
T ss_pred cCCCCCCcEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHH
Confidence 00 112222211 1 256776664 46778888888999999987 9999999999
Q ss_pred cCCEEEEeCCC-CCCCccCC-----CCCCccEEEeccccccccCCCc-eEEEEEEcChhHHHHHHHhh----hhcCCCCC
Q 016612 168 HGALLLVDNSI-MSPVLSRP-----LELGADIVMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFLQ----NAEGSGLA 236 (386)
Q Consensus 168 ~~~~li~D~a~-~~~~~~~~-----~~~~~di~~~S~sK~~~g~~g~-~~G~i~~~~~~~~~~~~~~~----~~~~~~~~ 236 (386)
+|+++|+||++ +.|-.... .....|+++ ++|.+++ |. .+|++++++ ++.+.+.... .......+
T Consensus 254 ~g~llI~DEV~tGfGR~G~~~a~~~~gv~PDivt--~gK~l~~--G~~pigav~~~~-~i~~~~~~~~~~~~~~~T~~gn 328 (460)
T PRK06541 254 YDVLLVSDEVICAFGRLGEMFGCERFGYVPDIIT--CAKGITS--GYSPLGAMIASD-RLFEPFLDGPTMFLHGYTFGGH 328 (460)
T ss_pred cCCEEEEechhhCCCcCchhhhhhhcCCCCCEEE--ecccccC--CccceeEEEEcH-HHHHHhhcCCCccccCCCCCCC
Confidence 99999999998 44332211 223578875 7999963 43 578888764 4544443211 11223445
Q ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-H------
Q 016612 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L------ 309 (386)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~------ 309 (386)
+...++.+..++.+.. +...++.+.+.+++.+.-. .+..++. ....++.|.++.+.+.. .
T Consensus 329 p~~~aaala~l~~l~~--~~~~~~~~~~g~~l~~~L~-------~l~~~~~----v~~vrg~Gl~~~ie~~~~~~~~~~~ 395 (460)
T PRK06541 329 PVSAAVALANLDIFER--EGLLDHVRDNEPAFRATLE-------KLLDLPI----VGDVRGDGYFYGIELVKDKATKETF 395 (460)
T ss_pred HHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH-------HhhcCCC----eEEEEecceEEEEEEecCcccccCC
Confidence 5566555555443321 1233444444444332110 0111110 01225678888888721 1
Q ss_pred --H-----hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHH
Q 016612 310 --A-----LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLD 378 (386)
Q Consensus 310 --~-----~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~ 378 (386)
. ....+.+.+..+|+.+.+... +...+|+++. .++++++++.+.
T Consensus 396 ~~~~~~~~~~~~~~~~l~~~Gi~~~~~~~-------------------------g~~~lrl~Ppl~~t~~~id~~~~~l~ 450 (460)
T PRK06541 396 TDDESERLLRGFLSPALFEAGLYCRADDR-------------------------GDPVVQLAPPLISGQEEFDEIEQILR 450 (460)
T ss_pred cchhhhhhHHHHHHHHHHhCCeEEEecCC-------------------------CCCEEEEECCCCCCHHHHHHHHHHHH
Confidence 0 112455666677776543110 1245888875 377888888888
Q ss_pred HHHhc
Q 016612 379 KALRT 383 (386)
Q Consensus 379 ~~l~~ 383 (386)
+++++
T Consensus 451 ~~l~~ 455 (460)
T PRK06541 451 SVLTE 455 (460)
T ss_pred HHHHH
Confidence 87764
No 314
>PRK06173 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.60 E-value=4.6e-14 Score=133.37 Aligned_cols=282 Identities=15% Similarity=0.111 Sum_probs=162.5
Q ss_pred chHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHh---c-----CC-CCEEEecCCCCCcH-HHHHhhhcc-------
Q 016612 55 PTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHL---L-----GT-GEEIVAGDDLYGGT-DRLLSRVTP------- 115 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~---~-----~~-g~~Vlv~~~~~~~~-~~~~~~~~~------- 115 (386)
+...++.+.+.+... .+...+++||++|+.+.+.+ . ++ ..+|+.-...|++. ...+ .+..
T Consensus 87 ~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~ 165 (429)
T PRK06173 87 EPAVELAQKLLEILPPSLNKIFFADSGSVAVEVAMKMALQYQQAKGEVQRTKFATIRSGYHGDTWHAM-SVCDPVTGMHG 165 (429)
T ss_pred HHHHHHHHHHHhhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCCcchhhh-ccCCCchhhhh
Confidence 445556666666653 34677889999998643332 1 12 35677777777664 2211 1100
Q ss_pred cCC---cEEEEeCCC-----------CHHHHHhhhC---CCceEEEEeCC-CCCCccccc----HHHHHHHHHHcCCEEE
Q 016612 116 KTG---VVVKRVNTC-----------DLDEVASAIG---PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLL 173 (386)
Q Consensus 116 ~~g---~~~~~v~~~-----------d~~~l~~~~~---~~~~~v~~~~~-~nptG~~~~----l~~i~~la~~~~~~li 173 (386)
.++ ..+..++.. +++.+++.+. +++.+|+++.. +...|.+.+ +++|.++|++||+++|
T Consensus 166 ~~~~~~~~~~~~~~p~~~~~~~~~~~~l~~l~~~i~~~~~~iAAvi~EPi~qg~gG~~~~~~~yl~~l~~lc~~~g~llI 245 (429)
T PRK06173 166 LFNHSLPVQYFLPQPSIKFGEEWNDEAIEPLQDLLEQKGDEIAALILEPVVQGAGGMYFYSPTYLVKARELCDQYGVLLI 245 (429)
T ss_pred cccccCCCCeEeCCCCcccchhHHHHHHHHHHHHHHhCCCcEEEEEEcchhhccCCcccCCHHHHHHHHHHHHHcCCeEE
Confidence 000 011222211 3555666664 57899999985 776777653 8999999999999999
Q ss_pred EeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCc-eEEEEEEcChhHHHHHHH-----hhhhcCCCCChhhHH
Q 016612 174 VDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDV-MAGVLAVKGERLAKELYF-----LQNAEGSGLAPFDCW 241 (386)
Q Consensus 174 ~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~-~~G~i~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~ 241 (386)
+||++.. |... .......|+++ ++|.++| |. -++.++++ +++.+.+.. +........++...+
T Consensus 246 ~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g--G~~p~~a~~~~-~~i~~~~~~~~~~~~~~~~T~~g~p~~~a 320 (429)
T PRK06173 246 FDEIATGFGRTGKLFALEHAGVVPDIMC--IGKALTG--GYLTLSATITT-EAIAQTICSGEAKCFMHGPTFMANPLACA 320 (429)
T ss_pred ecchhcCCCcCCcchHHHhcCCCCCEEE--eehhhhC--CccccceEEec-HHHHHHHhcCCCCccccCCCCCcCHHHHH
Confidence 9999842 1111 11233578886 7999854 42 35666665 456554431 112222345666676
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc
Q 016612 242 ICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 321 (386)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 321 (386)
+++..++.+.. +...++.+.+.+++.+.-. . +...+.. ...++.|.++.+.+.+......+.+.+..
T Consensus 321 aa~a~l~~i~~--~~~~~~~~~~g~~l~~~L~--~-----~~~~~~v----~~vRg~Gl~~~iel~~~~~~~~i~~~l~e 387 (429)
T PRK06173 321 IAAESIRLLLE--SPWQQNIQRIEAQLKQELA--P-----AAEFDSV----AEVRVLGAIGVVEMKEPVNMATLQPRFVE 387 (429)
T ss_pred HHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH--H-----hhcCCCe----eeeeccceEEEEEeCCcccHHHHHHHHHH
Confidence 66666654432 1233444444444433100 0 0001110 12256788999998665445677788877
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhc
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~ 383 (386)
+|+.+...+ +.||+.+ +.++++++++.|.++|++
T Consensus 388 ~Gi~v~~~g----------------------------~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 425 (429)
T PRK06173 388 HGIWVRPFG----------------------------KLVYIMPPFIISPDELSQLTSGLLRVLKQ 425 (429)
T ss_pred CCeEEEecC----------------------------CEEEEeCCccCCHHHHHHHHHHHHHHHHH
Confidence 888654321 2377765 458899999999998875
No 315
>PLN02760 4-aminobutyrate:pyruvate transaminase
Probab=99.59 E-value=1.1e-13 Score=132.84 Aligned_cols=323 Identities=17% Similarity=0.164 Sum_probs=182.6
Q ss_pred eeeccCC--CCCCCCCcccceeeeeeeecCCCCCCCCccccC-C-CCchHHHHHHHHHhhcC-CC--ceEEeCcHHHHHH
Q 016612 12 LLMNFSN--EFDPYGALSTPLYQTATFKQPSATENGPYDYTR-S-GNPTRDALESLLAKLDK-AD--RALCFTSGMAALA 84 (386)
Q Consensus 12 ~~~~~~~--~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~-~-g~~~~~~l~~~l~~~~g-~~--~~i~~~~gt~al~ 84 (386)
+.+++.. ++.++|..+|.+.++...... ...+...- . .++...++++.|.+.+. .+ ..++++||++|..
T Consensus 90 ~ylD~~sg~~~~~lGh~hp~v~~Av~~ql~----~~~~~~~~~~~~~~~~~~lae~L~~~~~~~~~~~v~f~~SGsEA~e 165 (504)
T PLN02760 90 KYLDALAGLWCTALGGSEPRLVAAATEQLN----KLPFYHSFWNRTTKPSLDLAKELLEMFTARKMGKVFFTNSGSEAND 165 (504)
T ss_pred EEEEcCcCHHhcccCCCCHHHHHHHHHHHh----hccceecccccCcHHHHHHHHHHHhhcCCCCCCEEEEeCChHHHHH
Confidence 4455442 367788888777664322211 11111111 1 34567788888888753 32 5777899999986
Q ss_pred HHHHhc-------C-C-CCEEEecCCCCCcHH-HHHhhhcc------cCCc---EEEEeCCC----------C-------
Q 016612 85 AVTHLL-------G-T-GEEIVAGDDLYGGTD-RLLSRVTP------KTGV---VVKRVNTC----------D------- 128 (386)
Q Consensus 85 ~~~~~~-------~-~-g~~Vlv~~~~~~~~~-~~~~~~~~------~~g~---~~~~v~~~----------d------- 128 (386)
+.+.+. . + .++|+..+..|++.. ..+ .+.. .++. .+..++.+ +
T Consensus 166 ~AlKlAr~~~~~~g~~~r~~iI~~~~~yHG~t~~a~-slsg~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~ 244 (504)
T PLN02760 166 TQVKLVWYYNNALGRPNKKKFIARSKSYHGSTLISA-SLSGLPALHQKFDLPAPFVLHTDCPHYWRFHLPGETEEEFSTR 244 (504)
T ss_pred HHHHHHHHHHHhcCCCCCcEEEEECCCccCChHhhh-hccCChhhccCCCCCCCCcEEeCCCcccccCCCCCcHHHHHHH
Confidence 443322 1 2 256777676665542 221 1110 1111 02222211 1
Q ss_pred -HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCC-CCCCcc-----CCCCCCccE
Q 016612 129 -LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLS-----RPLELGADI 193 (386)
Q Consensus 129 -~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~-~~~~~~-----~~~~~~~di 193 (386)
.+++++.+. +++.+|+++......|.+.| +++|.++|++||+++|+||++ +.|-.. ......+|+
T Consensus 245 ~~~~le~~l~~~~~~~iAAvI~EPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI~DEV~TGfGRtG~~~a~e~~gv~PDi 324 (504)
T PLN02760 245 LADNLENLILKEGPETIAAFIAEPVMGAGGVIPPPATYFEKIQAVLKKYDILFIADEVICAFGRLGTMFGCDKYNIKPDL 324 (504)
T ss_pred HHHHHHHHHHhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEecchhhCCcccchhhHHHhcCCCCcE
Confidence 134665552 46889999999888888877 999999999999999999998 344332 112335787
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHh-------hhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 016612 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 194 ~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 266 (386)
++ ++|.+++. .+.+|.++++ +++.+.+... ......+.++...++++..++.+.. +...++.+.+.+
T Consensus 325 vt--lgK~lggG-~~PigAv~~~-~~i~d~~~~~~~~~~~~~h~~T~~gnPl~~Aaala~Le~i~~--~~l~~~~~~~g~ 398 (504)
T PLN02760 325 VS--LAKALSSA-YMPIGAVLVS-PEISDVIHSQSNKLGSFAHGFTYSGHPVSCAVALEALKIYKE--RNIPEHVNKIAP 398 (504)
T ss_pred EE--ecccccCC-ccccceEeec-HHHHhhhhcccccccCcccCCCCCCCHHHHHHHHHHHHHHHh--CCHHHHHHHHHH
Confidence 65 69999651 1235667776 5566654321 1222234566777776666654432 234445555554
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-H----------HhHHHHHhhcCcceeccCCCCccccc
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L----------ALSKHVVETTKYFSITVSFGSVKSLI 335 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~----------~~~~~l~~~l~~~gi~~~~G~~~~~~ 335 (386)
++.+.-. . +...+- ..+.++.|.++.+.+.+ . .....+.+.+..+|+.+...+
T Consensus 399 ~l~~~L~--~-----l~~~~~----v~~vrG~Gl~~gie~~~~~~~~~~~~~~~~~~~~i~~~~~~~Gvl~~~~g----- 462 (504)
T PLN02760 399 RFQDGIK--A-----FSGSPI----IGEIRGTGLILGTEFVDNKSPNDPFPAEWGVGAYFGAECKKRGMLVRVAG----- 462 (504)
T ss_pred HHHHHHH--H-----HhcCCC----eeeEEeCceEEEEEEecCCcccccccchhHHHHHHHHHHHhCCcEEEecC-----
Confidence 4443210 0 111110 11236778888887732 1 125567777777787654311
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhcC
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~~ 384 (386)
..+|+++ +.++++++++.+.++|++.
T Consensus 463 -----------------------~~lrl~Ppl~it~eeid~~~~~l~~al~~~ 492 (504)
T PLN02760 463 -----------------------DNIMMSPPLIITPEEVDELISIYGKALKAT 492 (504)
T ss_pred -----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2378885 4588888888888888653
No 316
>PF12897 Aminotran_MocR: Alanine-glyoxylate amino-transferase; InterPro: IPR024551 This entry represents a family of putative aminotransferases.; PDB: 3D6K_C 3EZ1_A 3PPL_B.
Probab=99.59 E-value=6.8e-14 Score=123.93 Aligned_cols=291 Identities=17% Similarity=0.173 Sum_probs=146.4
Q ss_pred hHHHHHHHHHhhcCCC-ceEEeCcH-H-HHHH-HHH-Hhc----C--------CCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 56 TRDALESLLAKLDKAD-RALCFTSG-M-AALA-AVT-HLL----G--------TGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~~i~~~~g-t-~al~-~~~-~~~----~--------~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...++++.+++++|.+ +.+++.++ + .-++ ++. +++ . +.-++|+|.|+|.-++ .+++.+|
T Consensus 70 Gipe~r~l~a~llgv~~~~viv~gNSSL~lM~d~i~~a~~~G~~~~~~PW~~~~~vKfLCPvPGYDRHF----ai~E~~G 145 (425)
T PF12897_consen 70 GIPEARELFAELLGVPPENVIVGGNSSLNLMHDTISRAMLHGVPGSETPWCKEEKVKFLCPVPGYDRHF----AITEHFG 145 (425)
T ss_dssp --HHHHHHHHHHHTS-GGGEEE-SS-HHHHHHHHHHHHHHH--TT-SS-GGGSS--EEEEEES--HHHH----HHHHHCT
T ss_pred ChHHHHHHHHHHhCCCHHHEEEeccchHHHHHHHHHHHHhcCCCCCCCCchhccCceEEecCCCchHHH----HHHHhhC
Confidence 4668999999999988 44444444 4 3344 332 221 1 1236799999995444 7889999
Q ss_pred cEEEEeCCC----CHHHHHhhh--CCCceEEEEe-CCCCCCcccccHHHHHHHH----HHcCCEEEEeCCCCCCCcc-C-
Q 016612 119 VVVKRVNTC----DLDEVASAI--GPWTKLVWVE-SPTNPRQQICDIRKIAEMA----HAHGALLLVDNSIMSPVLS-R- 185 (386)
Q Consensus 119 ~~~~~v~~~----d~~~l~~~~--~~~~~~v~~~-~~~nptG~~~~l~~i~~la----~~~~~~li~D~a~~~~~~~-~- 185 (386)
++.+.||+. |.|.+++++ ++.+|.|+.. --+||||.++.-+-+.++| ...++.|+.|++|+.-++. +
T Consensus 146 iemi~VpM~~dGPDmD~Ve~LV~~D~svKGiWcVP~ySNPtG~tySde~vrrlA~m~~AA~DFRI~WDNAY~vHhL~~~~ 225 (425)
T PF12897_consen 146 IEMIPVPMTEDGPDMDMVEELVAEDPSVKGIWCVPKYSNPTGITYSDEVVRRLAAMKTAAPDFRIFWDNAYAVHHLYDEE 225 (425)
T ss_dssp -EEEEEEEETTEE-HHHHHHHTHTSTTEEEEEE-SSS-TTT-----HHHHHHHHHS--SSTT-EEEEE-TTTT-BSSSSS
T ss_pred cEEEecCCCCCCCCHHHHHHHHhcCCccceEEeCCCccCCCCccCCHHHHHHHhcCCcCCcCeEEEeecCceEeeccccc
Confidence 999999985 899999987 3677877764 6799999999755555555 3469999999999876652 1
Q ss_pred CCC--------------CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH
Q 016612 186 PLE--------------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA 251 (386)
Q Consensus 186 ~~~--------------~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (386)
+.. .+..+++.|+||.-...+| ++++.++.+++......+ .....+..-.++..-.+.+....
T Consensus 226 ~~~~~~nil~~~~~AGnpdrv~~F~STSKITf~GaG--va~~aaS~~Nl~~~~~~~-~~~tIgpdKvNQLRHvrff~d~~ 302 (425)
T PF12897_consen 226 PRDALLNILDACAKAGNPDRVYVFASTSKITFPGAG--VAFFAASEANLAWIKKHL-SVQTIGPDKVNQLRHVRFFKDAE 302 (425)
T ss_dssp S------HHHHHHHTT-TTSEEEEEESTTTS-TTSS---EEEEE-HHHHHHHHHHH-HHH-S---HHHHHHHHHHHHSHH
T ss_pred cchhhhHHHHHHHHcCCCCeEEEEecccccccCCcc--eeeeecCHHHHHHHHHHh-cCceeCccHHHHHHHHHHhcChh
Confidence 111 1346899999997655455 799998876665433332 22333444444433333333322
Q ss_pred -HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhh-hhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCC
Q 016612 252 -LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL-HYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFG 329 (386)
Q Consensus 252 -~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G 329 (386)
--.....+++..++-.++.- ...+...|.. +..+ -|..|+| |+|+++...+. .++++.+.+++.|+...+.
T Consensus 303 gGv~aHM~kHa~il~PKF~~V---~~~L~~~L~~--~~~ia~Wt~P~G-GYFIsld~~~G-~AkrvV~lakeAGV~LT~A 375 (425)
T PF12897_consen 303 GGVRAHMRKHAAILRPKFEAV---LEILEEELGD--GLGIASWTKPKG-GYFISLDVLDG-TAKRVVELAKEAGVALTPA 375 (425)
T ss_dssp THHHHHHHHHHHHHHHHHHHH---HHHHHHHHGT--GGTSEEE---SB-SS-EEEEESTT--HHHHHHHHHHTTEE---T
T ss_pred hHHHHHHHHHHHHHhhhHHHH---HHHHHHhcCC--CCCeeEecCCCC-ceEEEEecCCC-hHHHHHHHHHHhCceeCCC
Confidence 11122222222222111100 0001111110 0011 1233343 88899998665 4889999999999986663
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHH
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDL 377 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l 377 (386)
++ ++|+.... .+..|||+.+....+++-.++
T Consensus 376 GA----tfPyg~DP-------------~D~nIRiAPS~P~leel~~Am 406 (425)
T PF12897_consen 376 GA----TFPYGKDP-------------RDSNIRIAPSYPSLEELETAM 406 (425)
T ss_dssp TT----TSGGG--T-------------TS-EEEE--SSS-HHHHHHHH
T ss_pred CC----CCCCCCCC-------------CCCcEEecCCCCCHHHHHHHH
Confidence 32 24543221 356699999875555544433
No 317
>PF01212 Beta_elim_lyase: Beta-eliminating lyase; InterPro: IPR001597 This domain is found in many tryptophanases (tryptophan indole-lyase, TNase), tyrosine phenol-lyases (TPL) and threonine aldolases. It is involved in the degradation of amino acids. The glycine cleavage system is composed of four proteins: P, T, L and H. In Bacillus subtilis, the P 'protein' is an heterodimer of two subunits. The glycine cleavage system catalyses the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; GO: 0016829 lyase activity, 0006520 cellular amino acid metabolic process; PDB: 3PJ0_C 2C44_C 2V0Y_A 2OQX_A 2V1P_A 1AX4_B 3LWS_A 1C7G_A 1V72_A 2YHK_B ....
Probab=99.59 E-value=1.9e-15 Score=134.62 Aligned_cols=215 Identities=25% Similarity=0.271 Sum_probs=146.1
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
+++..+++++.+++++|.+..+++.+||.+.. ++..+++|++.|++.++.|...... .......|.+++.++..
T Consensus 27 ~D~~~~~l~~~i~~l~g~e~a~f~~sGT~An~~al~~~~~~~~~vi~~~~aHi~~~E~-ga~~~~~G~~~~~l~~~~~G~ 105 (290)
T PF01212_consen 27 EDPTTARLEERIAELFGKEAALFVPSGTMANQLALRAHLRPGESVICADTAHIHFDET-GAIEELSGAKLIPLPSDDDGK 105 (290)
T ss_dssp SSHHHHHHHHHHHHHHTSSEEEEESSHHHHHHHHHHHHHHTTEEEEEETTEHHHHSST-THHHHHTTCEEEEEBECTGTB
T ss_pred CChhHHHHHHHHHHHcCCCEEEEeCCCChHHHHHHHHHHhcCCceeccccceeeeecc-chhhHhcCcEEEECCCcccCC
Confidence 34789999999999999999999999998865 5666779999999998876322111 12234588888888753
Q ss_pred -CHHHHHhhhC------CCceEEEEeCCCCCC-cccc---cHHHHHHHHHHcCCEEEEeCCCCC------CCccCCCCCC
Q 016612 128 -DLDEVASAIG------PWTKLVWVESPTNPR-QQIC---DIRKIAEMAHAHGALLLVDNSIMS------PVLSRPLELG 190 (386)
Q Consensus 128 -d~~~l~~~~~------~~~~~v~~~~~~npt-G~~~---~l~~i~~la~~~~~~li~D~a~~~------~~~~~~~~~~ 190 (386)
++++|++.+. .++++|++++++|.. |.++ .+++|.++|++||+.+++|.+--. +........+
T Consensus 106 l~~~~l~~~~~~~~~h~~~~~~v~le~t~~~~GG~~~s~~el~ai~~~a~~~gl~lhmDGARl~~a~~~~~~~~~e~~~~ 185 (290)
T PF01212_consen 106 LTPEDLEAAIEEHGAHHPQPAVVSLENTTELAGGTVYSLEELRAISELAREHGLPLHMDGARLANAAAALGVSLAEIAAG 185 (290)
T ss_dssp B-HHHHHHHHHHHTGTSGGEEEEEEESSBTTTTSB---HHHHHHHHHHHHHHT-EEEEEETTHHHHHCHHHHHHHHHHTT
T ss_pred CCHHHHHHHhhhccccCCCccEEEEEecCcCCCCeeCCHHHHHHHHHHHHhCceEEEEehhhHHHhhhcccccHHHHhhh
Confidence 7899998875 368999999999964 5565 478899999999999999999421 1111222358
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCC--hhhHH------HHHhcCCcHHHHHHHHHHHHH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA--PFDCW------ICLRGVKTMALRVEKQQDNAQ 262 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~ 262 (386)
+|++.+|++|.++.+. +++++++++.+.+.....+.. +..+. ..... ..+..++....+..+..++++
T Consensus 186 ~D~v~~~~tK~~g~~~---Gavl~~~~~~i~~~~~~~k~~-gg~~~~~G~~~a~~~~~~~~l~~l~~~~~~~~~~~~~A~ 261 (290)
T PF01212_consen 186 ADSVSFGGTKNGGAPG---GAVLAGNKEFIAKARRQRKRL-GGGMRQAGVLAAAELYQFAALRALELWLERARHANAMAK 261 (290)
T ss_dssp SSEEEEETTSTT-SSS---EEEEEESHHHHHHHHHHHHHH-THHHHHTTHHHHHHHHHHHHHCHEECSHHHHHCHHHHHH
T ss_pred CCEEEEEEEccccccc---ceEEEechHHHHHHHHHHHHh-ccCeeecceeeeechhhHHHHHHHHhhHHHHHHHHHHHH
Confidence 9999999999986654 688888755444433332222 21111 11122 334445544566666777788
Q ss_pred HHHHHHhhCC
Q 016612 263 KIAEFLASHP 272 (386)
Q Consensus 263 ~l~~~l~~~~ 272 (386)
++.+.++..+
T Consensus 262 ~La~~l~~~~ 271 (290)
T PF01212_consen 262 RLAAGLEALG 271 (290)
T ss_dssp CHHHCHHEEC
T ss_pred HHHHHHHHCC
Confidence 8888877654
No 318
>TIGR00709 dat 2,4-diaminobutyrate 4-transaminases. This family consists of L-diaminobutyric acid transaminases. This general designation covers both 2.6.1.76 (diaminobutyrate-2-oxoglutarate transaminase, which uses glutamate as the amino donor in DABA biosynthesis), and 2.6.1.46 (diaminobutyrate--pyruvate transaminase, which uses alanine as the amino donor). Most members with known function are 2.6.1.76, and at least some annotations as 2.6.1.46 in current databases at time of model revision are incorrect. A distinct branch of this family contains examples of 2.6.1.76 nearly all of which are involved in ectoine biosynthesis. A related enzyme is 4-aminobutyrate aminotransferase (EC 2.6.1.19), also called GABA transaminase. These enzymes all are pyridoxal phosphate-containing class III aminotransferase.
Probab=99.57 E-value=1.4e-13 Score=131.10 Aligned_cols=317 Identities=16% Similarity=0.112 Sum_probs=175.0
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccC-CCCchHHHHHHHHHhhcCC----CceEEe-CcHHHHHHHHHHh---c
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTR-SGNPTRDALESLLAKLDKA----DRALCF-TSGMAALAAVTHL---L 90 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~-~g~~~~~~l~~~l~~~~g~----~~~i~~-~~gt~al~~~~~~---~ 90 (386)
...+|..+|.+.++...... ...+.+.. ..++...++.+.|.+++.. ...+++ +||++|+.+.+.+ .
T Consensus 50 ~~~lGh~~p~i~~ai~~q~~----~~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~~~~~f~~~sGsEA~e~AlklAr~~ 125 (442)
T TIGR00709 50 TLALGHNHPNMKQKILDYLQ----SGLPLHTLDLTTPLKDAFIEALLNIIPKRKMDYKLQFPGPSGADAVEAAIKLAKTY 125 (442)
T ss_pred hhcCCCCCHHHHHHHHHHHH----hccCccccccCcHHHHHHHHHHHHhCCCcCCCccEEEeCCCHHHHHHHHHHHHHHh
Confidence 34467777776654322111 11111111 2345677788888887743 233444 7999998644332 3
Q ss_pred CCCCEEEecCCCCCcHHHHHhhhccc----CC-----cEEEEeCCCC-------------H----HHHHhhhC------C
Q 016612 91 GTGEEIVAGDDLYGGTDRLLSRVTPK----TG-----VVVKRVNTCD-------------L----DEVASAIG------P 138 (386)
Q Consensus 91 ~~g~~Vlv~~~~~~~~~~~~~~~~~~----~g-----~~~~~v~~~d-------------~----~~l~~~~~------~ 138 (386)
....+|+.....|++.......+... .+ ..+..++..+ . +.+++.+. +
T Consensus 126 tgr~~Ii~~~~~yHG~t~~~~s~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (442)
T TIGR00709 126 TGRTNVISFSGGFHGMTIGALAVTGNLFAKNAVGMLMPGVQFMPYPHEYRCPFGIGGEAGSNASIEYFENFIEDVESGVD 205 (442)
T ss_pred cCCCeEEEEcCCcCCchHHHHhhcCChhhhccCCCCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhccCCC
Confidence 34467887777776654332222110 00 1122222211 1 11333332 4
Q ss_pred CceEEEEeCCCCCCcccc-c---HHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCc
Q 016612 139 WTKLVWVESPTNPRQQIC-D---IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDV 208 (386)
Q Consensus 139 ~~~~v~~~~~~nptG~~~-~---l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~ 208 (386)
++.+|+++...+..|.+. | +++|.++|++||+++|.||++.. +.... ......|+++ ++|.+++ |+
T Consensus 206 ~iaavi~Epi~g~~G~~~~~~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~~--G~ 281 (442)
T TIGR00709 206 KPAAVILEAIQGEGGVVAAPSEWLQKIREVTRKHDIKLILDEVQAGFGRSGTMFAFEHAGIEPDFVV--MSKAVGG--GL 281 (442)
T ss_pred ceEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCCCCchhHHHHcCCCCcEEE--EcccccC--Cc
Confidence 688999998877777775 3 89999999999999999999762 22111 1234578887 6999965 57
Q ss_pred eEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCch
Q 016612 209 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 288 (386)
Q Consensus 209 ~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 288 (386)
++|+++++++ + +.+.........+.++..++++...++.+.. +...++++.+.+++.+.-. . + .+.++.
T Consensus 282 Pigav~~~~~-~-~~~~~~~~~~T~~gnpla~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~L~--~-l---~~~~~~- 350 (442)
T TIGR00709 282 PLAVLLIAPE-F-DAWQPAGHTGTFRGNQLAMVTGTEALNYWKD--DNLAQNAQERGERITSFLD--D-M---IKEHPC- 350 (442)
T ss_pred ccEEEEEchH-H-hccCCCcCCCCCCcCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH--H-H---HHhCCC-
Confidence 8999998754 4 2221111122234566666666665543321 2334444444444432110 0 0 001110
Q ss_pred hhhhhccCCCCceEEEEeCCH--------------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhc
Q 016612 289 ELHYSQAKGAGSVLSFLTGSL--------------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 354 (386)
Q Consensus 289 ~i~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~ 354 (386)
..+.++.|.++.+.+... .....+...+..+|+.+.....
T Consensus 351 ---v~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~----------------------- 404 (442)
T TIGR00709 351 ---IGNVRGRGLMQGIMIVDERQSKDATGAYPRDCELAAAIQGACFENGLLLETGGR----------------------- 404 (442)
T ss_pred ---eeeeeccceEEEEEEccCcccccccccCCcchHHHHHHHHHHHHCCeEEeecCC-----------------------
Confidence 012367888888887321 2355677777777776543211
Q ss_pred CCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 355 GLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 355 ~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
..+.+|+.+. .++++++++.+.++|++
T Consensus 405 --~~~~l~~~Ppl~it~~ei~~~~~~l~~~l~~ 435 (442)
T TIGR00709 405 --EGEVFRLLCPITIDQEECEEGISRFKQAVEE 435 (442)
T ss_pred --CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1345888775 48888888888888765
No 319
>PRK13578 ornithine decarboxylase; Provisional
Probab=99.57 E-value=2.1e-13 Score=133.29 Aligned_cols=156 Identities=20% Similarity=0.218 Sum_probs=120.6
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...+.++.+++.||++...++++|| .++. ++++++++||.||+.+.+|-+..+ ..+-..|+..+++.+.
T Consensus 175 ~i~eAq~~AA~~fgAd~tyFlvNGTS~gn~a~i~a~~~~Gd~VLvdRN~HKSv~h---gaLiLsGa~PVYl~P~~n~~Gi 251 (720)
T PRK13578 175 AAKDAQKHAAKVFNADKTYFVLNGTSASNKVVTNALLTPGDLVLFDRNNHKSNHH---GALIQAGATPVYLETARNPFGF 251 (720)
T ss_pred HHHHHHHHHHHHhCCCceEEEeCChhHHHHHHHHHhcCCCCEEEeecccHHHHHH---HHHHHcCCeEEEeeccccccCC
Confidence 5889999999999999877777776 6665 677899999999999999988764 2234678888887642
Q ss_pred ----C-----HHHHHhhhCCC----------ceEEEEeCCCCCCcccccHHHHHHH-HHHcCCEEEEeCCCCCCC-----
Q 016612 128 ----D-----LDEVASAIGPW----------TKLVWVESPTNPRQQICDIRKIAEM-AHAHGALLLVDNSIMSPV----- 182 (386)
Q Consensus 128 ----d-----~~~l~~~~~~~----------~~~v~~~~~~nptG~~~~l~~i~~l-a~~~~~~li~D~a~~~~~----- 182 (386)
+ .+.+++++... .+++++++|++ .|.+.++++|++. ++.++ +|++||||+.-.
T Consensus 252 ~g~I~~~~~~~~~i~~~i~~~~p~~~~~~~p~k~vvit~pTY-dG~~ydi~~I~~~~~h~~~-~llvDEAhgah~~F~p~ 329 (720)
T PRK13578 252 IGGIDAHCFDEEYLREQIREVAPERADEARPFRLAVIQLGTY-DGTIYNARQVVDKIGHLCD-YILFDSAWVGYEQFIPM 329 (720)
T ss_pred cCCCChHHccHHHHHHHHHhcCccccccccCceEEEEECCCC-cceeecHHHHHHHhhccCC-cEEEeCcchhhhccCcc
Confidence 3 45578777532 58999999988 6999999999998 68888 999999986321
Q ss_pred ---cc-CCCCCCcc----EEEeccccccccCCCceEEEEEEcCh
Q 016612 183 ---LS-RPLELGAD----IVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 183 ---~~-~~~~~~~d----i~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
++ .....|+| +++.|.||.+.+... ++++..++.
T Consensus 330 ~~~~p~~al~~GaD~p~i~v~QStHKtL~alTQ--aS~LHvk~~ 371 (720)
T PRK13578 330 MADCSPLLLELNENDPGIFVTQSVHKQQAGFSQ--TSQIHKKDN 371 (720)
T ss_pred cccCChhhhhcCCCCCCeEEEEChhhcchhhhh--HhhhhcCCc
Confidence 11 11345888 999999999987664 778877653
No 320
>PRK13360 omega amino acid--pyruvate transaminase; Provisional
Probab=99.56 E-value=2.4e-13 Score=129.16 Aligned_cols=286 Identities=15% Similarity=0.182 Sum_probs=160.5
Q ss_pred CchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHh---cC-----C-CCEEEecCCCCCcHHHHHhhhc------cc
Q 016612 54 NPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHL---LG-----T-GEEIVAGDDLYGGTDRLLSRVT------PK 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~---~~-----~-g~~Vlv~~~~~~~~~~~~~~~~------~~ 116 (386)
++...++.+.+.+++. .+...+++||++|+.+.+.+ .. + ..+|+.-...|++.......+. +.
T Consensus 88 ~~~~~~la~~l~~~~p~~~~~v~f~~sGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~tg~~~~~~~ 167 (442)
T PRK13360 88 HPKAFELANRIAEIAPGGLNHVFFTNSGSESVDTALKIALAYHRARGEGSRTRLIGRERGYHGVGFGGISVGGIVPNRKA 167 (442)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEEcCCcCCccHhhhhccCChhhhhc
Confidence 3455566677777653 34678889999998643332 11 2 3578877777766421100110 00
Q ss_pred CC---cEEEEeCCC------------------CHHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHH
Q 016612 117 TG---VVVKRVNTC------------------DLDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 117 ~g---~~~~~v~~~------------------d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 167 (386)
++ ..+.+++.. ..+++++.+. +++.+|+++......|.+.| +++|.++|++
T Consensus 168 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~aavivEpi~g~~G~~~~~~~fl~~lr~lc~~ 247 (442)
T PRK13360 168 FGALLPGVDHLPHTLDLARNAFSKGQPEHGAELADELERLVTLHDASTIAAVIVEPVAGSTGVLIPPKGYLQRLREICDK 247 (442)
T ss_pred cCCCCCCCEEeCCCchhhccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 112222221 1356676663 56889999999888898887 9999999999
Q ss_pred cCCEEEEeCCC-CCCCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh-------hhhcCCC
Q 016612 168 HGALLLVDNSI-MSPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSG 234 (386)
Q Consensus 168 ~~~~li~D~a~-~~~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-------~~~~~~~ 234 (386)
||+++|+||++ +.|.... .....+|++ +++|.+++ +.+.+|.++++ +++.+.+..- ......+
T Consensus 248 ~g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv--t~gK~l~g-G~~P~gav~~~-~~i~~~~~~~~~~~~~~~~~~T~~ 323 (442)
T PRK13360 248 HGILLIFDEVITGFGRLGAPFAAQYFGVTPDLL--TCAKGLTN-GAIPMGAVFVS-SEIHDAFMQGPEAGIEFFHGYTYS 323 (442)
T ss_pred cCCEEEEechhhCCCCCccchhhhhcCCCCcee--eeeecccc-CccceEEEEEc-HHHHHHhhcCCccccccccCCCCC
Confidence 99999999998 3333221 123356877 56999964 11335667665 4565544321 1122234
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-----H
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----L 309 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-----~ 309 (386)
.++...+++...++.+.. +...++++.+.+++.+.-. .+...+.+ .+.++.|.+..+.+.. .
T Consensus 324 g~pl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~l~-------~l~~~~~v----~~vrG~Gl~~~~~l~~~~~~~~ 390 (442)
T PRK13360 324 GHPLACAAALATLDLYER--EGLLTRAARLAPYWEDALH-------SLRDAPHV----IDIRNLGLVGAVELAPRDGKPG 390 (442)
T ss_pred CCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH-------HhhcCCCe----eeeeccceEEEEEEecCCCCcc
Confidence 466666666555554322 2233444444444433210 01111100 1124556666665521 1
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
....++.+.+..+|+.+..+ .+.+|+++. .++++++++.|.++|+++
T Consensus 391 ~~~~~~~~~l~~~Gvl~~~~----------------------------~~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 441 (442)
T PRK13360 391 KRAYEVFLKCFEKGLMIRYT----------------------------GDILALSPPLIIEEAQIDELFDILAQALKET 441 (442)
T ss_pred hhHHHHHHHHHHCCcEEEec----------------------------CCEEEEeCCCccCHHHHHHHHHHHHHHHHHh
Confidence 23456666777777755421 123888854 588888888888888653
No 321
>PRK12403 putative aminotransferase; Provisional
Probab=99.56 E-value=5.8e-13 Score=127.17 Aligned_cols=283 Identities=15% Similarity=0.122 Sum_probs=158.5
Q ss_pred CchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHhc--------CCCCE-EEecCCCCCcH-HHHHhhhcc-----c
Q 016612 54 NPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHLL--------GTGEE-IVAGDDLYGGT-DRLLSRVTP-----K 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~~--------~~g~~-Vlv~~~~~~~~-~~~~~~~~~-----~ 116 (386)
++...++++.++++++ .+.+++++||++|+.+.+.+. ++++. |+.-..+|++. ...+ .+.. .
T Consensus 97 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AiklAr~~~~~~g~~~r~~ii~~~~~yHG~t~~~~-s~s~~~~~~~ 175 (460)
T PRK12403 97 HPAVIELSELLFSLLPGHYSHAIYTNSGSEANEVLIRTVRRYWQVLGKPQKKIMIGRWNGYHGSTLAAT-ALGGMKFMHE 175 (460)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCCcEEEEECCCcCcccHhhh-hcCCCccccc
Confidence 3567788888888876 357888999999986433321 23333 44444455443 3222 1110 0
Q ss_pred CC---cEEEEeCCC-----------------CHHHHHhhh----CCCceEEEEeCCCCCCccccc----HHHHHHHHHHc
Q 016612 117 TG---VVVKRVNTC-----------------DLDEVASAI----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 117 ~g---~~~~~v~~~-----------------d~~~l~~~~----~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~ 168 (386)
.+ -.+..++.. +.+++++.+ .+++.+|+++......|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iaavI~Epv~g~gG~~~~~~~yl~~lr~lc~~~ 255 (460)
T PRK12403 176 MGGLIPDVAHIDEPYWYANGGELTPAEFGRRAALQLEEKILELGAENVAGFVAEPFQGAGGMIFPPESYWPEIQRICRQY 255 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHHhCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHHc
Confidence 00 012233211 124555544 256789999998888888876 99999999999
Q ss_pred CCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCc-eEEEEEEcChhHHHHHHHh----hhhcCCCCCh
Q 016612 169 GALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFL----QNAEGSGLAP 237 (386)
Q Consensus 169 ~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~-~~G~i~~~~~~~~~~~~~~----~~~~~~~~~~ 237 (386)
|+++|+||+++ .|-.. ......+|+++ ++|.+++ |. .+|.++++ +++.+.+... ......+.++
T Consensus 256 g~lLI~DEV~tGfGRtG~~~a~e~~gv~PDiv~--~gK~lgg--G~~Piga~v~~-~~i~~~~~~~~~~~~~~~T~~gnP 330 (460)
T PRK12403 256 DVLLCADEVIGGFGRTGEWFAHEHFGFEPDTLS--IAKGLTS--GYVPMGGLVLS-KRIAEALVEQGGVFAHGLTYSGHP 330 (460)
T ss_pred CCEEEEeccccCCCcCchhhhhhhcCCCCCeEE--Ecccccc--cccceEEEEEC-HHHHHHHhcCCCccccCCCCCCCH
Confidence 99999999985 22221 12234578886 6999875 32 35666665 5565544321 1122334667
Q ss_pred hhHHHHHhcCCcHHHH--HHHHH-HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----
Q 016612 238 FDCWICLRGVKTMALR--VEKQQ-DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL----- 309 (386)
Q Consensus 238 ~~~~~~~~~~~~~~~~--~~~~~-~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----- 309 (386)
...++++..++.+... .++.. +..+.+.+.|++.. ..++. ..+.++.|.++.+.+...
T Consensus 331 l~~Aaala~L~~i~~~~l~~~~~~~~g~~l~~~L~~l~----------~~~~~----i~~vrG~Gl~~gie~~~~~~~~~ 396 (460)
T PRK12403 331 VAAAVAIANLKALRDEGVVTRVKDDTGPYLQRCLREVF----------GDHPL----VGEVQGAGLVAALQFAEDKATRK 396 (460)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHH----------hcCCC----EEeEeecceEEEEEEccCccccc
Confidence 7777766666544321 12221 23333444343211 11110 112267788888887211
Q ss_pred ------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHH
Q 016612 310 ------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDK 379 (386)
Q Consensus 310 ------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~ 379 (386)
.....+...+..+|+.+.... +.+|+++. .++++++++.+.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~Gll~~~~~----------------------------~~~~l~Ppl~it~~eid~~~~~l~~ 448 (460)
T PRK12403 397 RFANENDLAWRCRTIGFEEGVIIRSTL----------------------------GRMIMAPALVAGRAEIDELVDKTRI 448 (460)
T ss_pred cccchhHHHHHHHHHHHhCCEEEEecC----------------------------CEEEEECCCCCCHHHHHHHHHHHHH
Confidence 112234444455666543211 12666654 4889999999999
Q ss_pred HHhcC
Q 016612 380 ALRTG 384 (386)
Q Consensus 380 ~l~~~ 384 (386)
+|+++
T Consensus 449 al~~~ 453 (460)
T PRK12403 449 AVDRT 453 (460)
T ss_pred HHHHH
Confidence 88754
No 322
>PRK05639 4-aminobutyrate aminotransferase; Provisional
Probab=99.56 E-value=3.3e-13 Score=128.53 Aligned_cols=285 Identities=14% Similarity=0.145 Sum_probs=163.7
Q ss_pred chHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhcc-----cCC-----c
Q 016612 55 PTRDALESLLAKLDKA--DRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVTP-----KTG-----V 119 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~-----~~g-----~ 119 (386)
+...++.+.|.+..+. +...+++||++|+.+.+. ....+.+|+.-...|++.......+.. ..+ .
T Consensus 96 ~~~~~lae~L~~~~p~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~a~s~~~~~~~~~~~~~~~~~ 175 (457)
T PRK05639 96 ERAIRVAEKLAEISPIENPKVLFGLSGSDAVDMAIKVSKFSTRRPWILAFIGAYHGQTLGATSVAAFQSSQKRGFSPLMP 175 (457)
T ss_pred HHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHHHcCCCcccccCCCCCCC
Confidence 4566777777777643 467888999999864333 233456788777777664322112111 011 1
Q ss_pred EEEEeCCC-------------CH--------HHHHhhh------CCCceEEEEeCCCCCCccccc----HHHHHHHHHHc
Q 016612 120 VVKRVNTC-------------DL--------DEVASAI------GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 120 ~~~~v~~~-------------d~--------~~l~~~~------~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~ 168 (386)
.+..++.. +. +.+++.+ .+++.+|+++......|.+.| +++|.++|++|
T Consensus 176 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~l~~lc~~~ 255 (457)
T PRK05639 176 NVVWIPYPNPYRNPWGINGYEEPDELINRFLDYLENYVFSHVVPPDEVAALFAEPIQGDAGIVVPPENFFKELKKLLDEH 255 (457)
T ss_pred CceEeCCCccccccccccccCCHHHHHHHHHHHHHHHHHHhhcCCCceEEEEECCccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 12333322 12 2344443 357899999988887777664 89999999999
Q ss_pred CCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 169 GALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 169 ~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
|+++|+||++.. |-.. ......+|+++ ++|.+++ |+.+|+++++ +++.+... -......+.++...++
T Consensus 256 g~llI~DEv~tG~GrtG~~~a~~~~gv~PDiv~--~gK~l~g--G~pi~av~~~-~~i~~~~~-~~~~~T~~g~p~~~aa 329 (457)
T PRK05639 256 GILLVMDEVQTGIGRTGKWFASEWFEVKPDLII--FGKGVAS--GMGLSGVIGR-KELMDLTS-GSALLTPAANPVISAA 329 (457)
T ss_pred CCEEEEechhhccCcCchHHHHHhcCCCCCEEE--echhhcC--CCcceeEEeh-HHHHhhcC-CCcccCCCcCHHHHHH
Confidence 999999999862 1111 11234678887 6999974 3446888876 44554211 1111223455666666
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhhCCC-cceEecCCCCCCCchhhhhhccCCCCceEEEEeC------CHHhHHHH
Q 016612 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG------SLALSKHV 315 (386)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~------~~~~~~~l 315 (386)
.+..++.+.. +...++.+.+.+++.+.-. +.. .++.+ .+.++.|.++.+.+. +......+
T Consensus 330 a~a~l~~l~~--~~l~~~~~~~g~~l~~~L~~l~~-~~~~~----------~~VrG~Gl~~gve~~~~~~~~~~~~~~~~ 396 (457)
T PRK05639 330 AEATLEIIEE--ENLLKNALKVGEFIKKRLLEMKE-SFEVI----------GDVRGKGLMIGVEIVKENGKPDPELTGKI 396 (457)
T ss_pred HHHHHHHHHH--ccHHHHHHHHHHHHHHHHHHHHH-hCCCE----------EeeccceeEEEEEEecCCCCCCHHHHHHH
Confidence 5555544322 2333444444444432110 000 00111 122677888888762 22345677
Q ss_pred HhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 316 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.+.+..+|+.+...+ ...+.+|+.+.+ ++++++++.+.+++++
T Consensus 397 ~~~~~~~Gv~~~~~g-------------------------~~~~~lr~~Ppl~it~~~id~~~~~l~~~l~~ 443 (457)
T PRK05639 397 CWRAFELGLILPSYG-------------------------MFGNVIRITPPLVITKEIAEKGLEIMERAIKD 443 (457)
T ss_pred HHHHHhCCeEEeecC-------------------------CCCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 777777787654311 113458888753 7788888888887754
No 323
>PF03841 SelA: L-seryl-tRNA selenium transferase; InterPro: IPR018319 In prokaryotes, the incorporation of selenocysteine as the 21st amino acid, encoded by TGA, requires several elements: SelC is the tRNA itself, SelD acts as a donor of reduced selenium, SelA modifies a serine residue on SelC into selenocysteine, and SelB is a selenocysteine-specific translation elongation factor. 3-prime or 5-prime non-coding elements of mRNA have been found as probable structures for directing selenocysteine incorporation. This family describes SelA. A close homologue of SelA is found in Helicobacter pylori, but all other required elements are missing and the protein is shorter at the N terminus than SelA from other species. The trusted cut-off is set above the score generated for Helicobacter pylori putative SelA.; PDB: 2AEV_A 2AEU_A.
Probab=99.55 E-value=7.9e-15 Score=130.61 Aligned_cols=165 Identities=28% Similarity=0.378 Sum_probs=42.4
Q ss_pred HHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhcCCCCEEEecCCC---CCcHHHHHhhhcccCCcEEEEeCCC---CHH
Q 016612 57 RDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDL---YGGTDRLLSRVTPKTGVVVKRVNTC---DLD 130 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~---~~~~~~~~~~~~~~~g~~~~~v~~~---d~~ 130 (386)
...+++.+++++|+++.++++++++|+..++..+.+|.+|+++... +++.+++ ..+.+..|.++++|-.. .++
T Consensus 49 ~~~v~~ll~~ltgAeaA~VvNnnaAAv~L~l~~la~~~EvIvsRGelVeiGgsFRi-p~vm~~sGa~lvEVGttN~t~~~ 127 (367)
T PF03841_consen 49 YAHVEELLCELTGAEAALVVNNNAAAVLLALNTLAKGKEVIVSRGELVEIGGSFRI-PDVMRQSGARLVEVGTTNRTHLS 127 (367)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccccccccccccccccccccc
Confidence 4567888999999999999999999998777766778899988863 3444433 46778899999998875 588
Q ss_pred HHHhhhCCCceEEEEeCCCCCC--ccc--ccHHHHHHHHHHcCCEEEEeCCCC---------C---CCccCCCCCCccEE
Q 016612 131 EVASAIGPWTKLVWVESPTNPR--QQI--CDIRKIAEMAHAHGALLLVDNSIM---------S---PVLSRPLELGADIV 194 (386)
Q Consensus 131 ~l~~~~~~~~~~v~~~~~~npt--G~~--~~l~~i~~la~~~~~~li~D~a~~---------~---~~~~~~~~~~~di~ 194 (386)
+++++++++|.+++-.+++|.. |+. .+++++++++++|++++++|...+ . +........|+|++
T Consensus 128 Dye~AI~e~Ta~ll~Vh~Sn~~i~GFt~~~~~~el~~la~~~~lp~i~DlgsG~l~dl~~~gl~~Ep~v~~~~~~GaDlV 207 (367)
T PF03841_consen 128 DYEKAITENTAALLKVHTSNFRIQGFTGEVSLEELAELAKEHGLPVIVDLGSGLLVDLSPYGLPDEPTVQEYLAAGADLV 207 (367)
T ss_dssp ---------------------------------HHHHHHHHHT--EEEE-TTHHHHHHHTT----------CCCCT-SEE
T ss_pred cccccccccccccccccccccccccccccccHHHHHHHHhhcCCcEEEECCCCCCcCcccccCccccHHHHHhhcCCCEE
Confidence 9999999999999999988864 333 479999999999999999999862 1 22234456799999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHH
Q 016612 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYF 226 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~ 226 (386)
++|..|.++||. .|++++++ ++.++++.
T Consensus 208 ~fSGdKlLGGPQ---aGiI~Gkk-~lI~~lk~ 235 (367)
T PF03841_consen 208 TFSGDKLLGGPQ---AGIIVGKK-ELIEKLKK 235 (367)
T ss_dssp EEETTSSSSS-S----EEEEEEH-HHHHHHHH
T ss_pred EEECCCcCCCCC---eEEEEeCH-HHHHHHhh
Confidence 999999998875 79999985 45555543
No 324
>PRK05769 4-aminobutyrate aminotransferase; Provisional
Probab=99.55 E-value=3.2e-13 Score=128.33 Aligned_cols=285 Identities=16% Similarity=0.127 Sum_probs=163.4
Q ss_pred CchHHHHHHHHHhhcC---CCceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhccc-------C---
Q 016612 54 NPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVTPK-------T--- 117 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-------~--- 117 (386)
++...++.+.|.+..+ .+...+++||++|+.+.+. .....++|+.-+..|++.......+... +
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~~~v~f~~SGsEA~e~AlklAr~~tgr~~Ii~~~~~yHG~t~~~ls~t~~~~~~~~~~~~~ 175 (441)
T PRK05769 96 YEPAVELAERLVEIAPGGFEKKVFFTNSGTESNEAAIKIARYHTGRKYIIAFLGAFHGRTYGSLSLTASKPVQRKGFFPL 175 (441)
T ss_pred CHHHHHHHHHHHHhCCCCCCCEEEECCchHHHHHHHHHHHHHHhCCCeEEEECCCcCCccHHHHHhcCCCcccccCCCCC
Confidence 4566777778877764 2467788999999864332 2233467777777776653221121100 0
Q ss_pred CcEEEEeCCC----------C--------HHHHHh-hh-----CCCceEEEEeCCCCCCccccc----HHHHHHHHHHcC
Q 016612 118 GVVVKRVNTC----------D--------LDEVAS-AI-----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHG 169 (386)
Q Consensus 118 g~~~~~v~~~----------d--------~~~l~~-~~-----~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~ 169 (386)
...+..++.. + .+.+++ .+ .+++.+|+++......|.+.| +++|.++|++||
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~~~iaavi~Epv~g~~G~~~~~~~~l~~l~~l~~~~g 255 (441)
T PRK05769 176 MPGVIHVPYPNPYRNPWGIENPEECGNAVLDFIEDYLFKKLVPPEEVAAIIVEPIQGEGGYVVPPKNFFKELRKLADKYG 255 (441)
T ss_pred CCCeEEeCCCccccccccCCchHHHHHHHHHHHHHHHHhhccCCCceEEEEECcccCCCCCcCCCHHHHHHHHHHHHHcC
Confidence 0112233221 1 233554 22 257889999999888898887 999999999999
Q ss_pred CEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHH
Q 016612 170 ALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (386)
Q Consensus 170 ~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (386)
+++|+||++.. +.... ......|+++ ++|.+++ |+++|++++++ ++..... .......+.++...+++
T Consensus 256 ~lli~DEv~tG~gr~G~~~a~~~~gv~pDivt--~~K~l~~--G~p~gav~~~~-~i~~~~~-~~~~~T~~g~p~~~aaa 329 (441)
T PRK05769 256 ILLIDDEVQTGMGRTGKMFAIEHFGVEPDIIT--LAKAIAG--GLPLGAVIGRA-ELMFLPP-GSHANTFGGNPVAAAAA 329 (441)
T ss_pred CEEEEechhhCCCcccceehhhccCCCCCEEE--EcccccC--CcccEEEEEeh-hhhhcCC-CCCCCCCCcCHHHHHHH
Confidence 99999999862 22111 1123468875 6899964 56788888874 4443221 11112223456666665
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC------HHhHHHHHh
Q 016612 244 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS------LALSKHVVE 317 (386)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------~~~~~~l~~ 317 (386)
...++.+.. ...++.+.+.+++.+.-. .+. .+++. ..+.++.|.++.+.+.+ ......+.+
T Consensus 330 ~a~L~~l~~---~~~~~~~~~g~~l~~~L~--~l~----~~~~~----~~~vrg~G~~~~i~~~~~~~~~~~~~~~~~~~ 396 (441)
T PRK05769 330 LATLEELEE---GLLENAQKLGEYLRKELK--ELK----EKYEF----IGDVRGLGLMIGVELVKDRKEPDPKLRDKVLY 396 (441)
T ss_pred HHHHHHHHH---HHHHHHHHHHHHHHHHHH--HHH----HhCCC----eeeeecceEEEEEEeccCCccccHHHHHHHHH
Confidence 555554432 334444444444432110 000 00110 01235678888888732 234566777
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+...|+.+.+. +.+.+|+++. .++++++++.+.+++++.
T Consensus 397 ~~~~~Gil~~~~---------------------------~~~~lr~~p~l~~t~~~id~~~~~l~~~l~~~ 440 (441)
T PRK05769 397 EAFKRGLLLLGA---------------------------GKSAIRIIPPLIITEEEADIGLEILEEAIKEL 440 (441)
T ss_pred HHHhCCcEEecC---------------------------CCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 777777754321 1234888865 488888888888888653
No 325
>PRK06943 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.55 E-value=4.1e-13 Score=127.86 Aligned_cols=285 Identities=15% Similarity=0.143 Sum_probs=165.3
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHhc---------CCCCEEEecCCCCCcHHHHHhhhccc------
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLL---------GTGEEIVAGDDLYGGTDRLLSRVTPK------ 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~~---------~~g~~Vlv~~~~~~~~~~~~~~~~~~------ 116 (386)
++...++.+.+.+..+. +...+++||++|+.+.+.+. ....+|+.-...|++.......+...
T Consensus 96 ~~~~~~lAe~L~~~~p~~~~~v~f~~sGseAve~AlKlA~~~~~~rg~~~r~~Ii~~~~~yHG~t~gals~~~~~~~~~~ 175 (453)
T PRK06943 96 HEPAIELAERLAALTGGTLGHAFFASDGASAVEIALKMSFHAWRNRGRGDKREFVCLANGYHGETIGALGVTDVALFKDA 175 (453)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHHHHHHHhCCCCCCEEEEECCCcCCCcHHhhcccCChhhhcc
Confidence 34555666777776654 36778889999986433321 12356887777776642111111100
Q ss_pred CC---cEEEEeCCC-----------------CHHHHHhhhC---CCceEEEEeC-CCCCCccccc----HHHHHHHHHHc
Q 016612 117 TG---VVVKRVNTC-----------------DLDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 117 ~g---~~~~~v~~~-----------------d~~~l~~~~~---~~~~~v~~~~-~~nptG~~~~----l~~i~~la~~~ 168 (386)
++ ..+..++.. +++++++.+. +++.+|+++. +....|.+.+ +++|.++|++|
T Consensus 176 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAviiEPvvqg~gG~~~~~~~yl~~lr~lc~~~ 255 (453)
T PRK06943 176 YDPLIRHAHVVASPDARGARPGETAADVAARALADVRRLFAERAGKIAALIVEPLVQCAAGMAMHDPSYLRGLRALCDRY 255 (453)
T ss_pred cccCCCCCEEECCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEeccccccCCcccCCHHHHHHHHHHHHHc
Confidence 00 011122211 2466776664 6789999998 4776777654 89999999999
Q ss_pred CCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHh------hhhcCCCC
Q 016612 169 GALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL------QNAEGSGL 235 (386)
Q Consensus 169 ~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~------~~~~~~~~ 235 (386)
|+++|.||++. .|-.. ......+|+++. +|.++| | +.+|.++++ +++.+.+..- ......+.
T Consensus 256 gillI~DEV~TG~GRtG~~fa~~~~gv~PDivt~--gKgl~g--G~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~T~~g 330 (453)
T PRK06943 256 GVHLIADEIAVGCGRTGTFFACEQAGVWPDFLCL--SKGISG--GYLPLSLVLSR-DAIFAAFYDDDVTRGFLHSHSYTG 330 (453)
T ss_pred CCEEEeechhhCCCCCcchhHHHhCCCCCCeEee--ehhhcc--CcccceEEEEc-HHHHHhhcccCccCCccCCCCCCC
Confidence 99999999975 22222 122346799975 999865 4 347778776 4565544311 11122234
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CH----H
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SL----A 310 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~----~ 310 (386)
++...++.+..++.+.. +...++.+.+.+++.+.-. .+...+.+ .+.++.|.++.+.+. +. .
T Consensus 331 npl~~aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~-------~l~~~~~v----~~vrG~Gl~~gvel~~~~~~~~~ 397 (453)
T PRK06943 331 NPLACRAALATLDLFAE--DDVLARNARKSARLRAALA-------PLAAHPQV----RHLRQRGTIFAFDVALDGDAART 397 (453)
T ss_pred CHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH-------HHhcCCCE----EeEeccccEEEEEEccCCCcchH
Confidence 56666666665554332 2344555555554443210 01111111 123678888888874 21 2
Q ss_pred hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhcC
Q 016612 311 LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 311 ~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~~ 384 (386)
...++.+.+..+|+.....+ +.+|+++ +.++++++++.+.++|+++
T Consensus 398 ~~~~i~~~~~~~Gll~~~~g----------------------------~~l~~~Ppl~it~~eid~~~~~l~~al~~~ 447 (453)
T PRK06943 398 FSRRFFEAALERELLLRPIG----------------------------TTVYLMPPYVLDDDEIAWLAERTRATLDAT 447 (453)
T ss_pred HHHHHHHHHHHCCcEEEecC----------------------------CEEEEeCCCcCCHHHHHHHHHHHHHHHHHH
Confidence 35567777777787543211 2377774 4588899999999888753
No 326
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=99.54 E-value=4.3e-13 Score=118.66 Aligned_cols=301 Identities=14% Similarity=0.131 Sum_probs=169.1
Q ss_pred CccceeeccCCC--CCCCCCcccceeeeeeeecCCCC-CCCCccccCC-CCc-hHHHHHHHHHhhcCCC---------ce
Q 016612 8 GVSTLLMNFSNE--FDPYGALSTPLYQTATFKQPSAT-ENGPYDYTRS-GNP-TRDALESLLAKLDKAD---------RA 73 (386)
Q Consensus 8 ~~~~~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---------~~ 73 (386)
-+.+..+|+|-+ .|..| ..|++++.......+. ......|-+- |.+ ..+++.+.+ ||.+ ..
T Consensus 23 D~R~~KVNLgIGvY~de~G--k~pvl~aV~~Ae~~l~~~~~~k~Yl~i~G~~~f~~~~~~ll---FG~d~~~l~~~Rv~t 97 (396)
T COG1448 23 DPRPNKVNLGIGVYKDEDG--KTPVLRAVKKAEKRLLEQEKTKNYLPIEGLPEFLEAVQKLL---FGADSPALAEDRVAT 97 (396)
T ss_pred CCCcCeeeeeeeeeeCCCC--CcchhHHHHHHHHHhhccccccccCCcCCcHHHHHHHHHHh---cCCCcHHHHhhhHhh
Confidence 344566777733 33355 4445554333222221 2344456655 776 455555554 5643 25
Q ss_pred EEeCcHHHHHHHH---HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhC--CCce
Q 016612 74 LCFTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG--PWTK 141 (386)
Q Consensus 74 i~~~~gt~al~~~---~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~--~~~~ 141 (386)
+-+.+||.|+... ++...+...|.+++|+|+.+. .+++..|.++..++.- |.+.+...+. +...
T Consensus 98 ~Qt~GGTGAL~~~A~fl~~~~~~~~vwis~PtW~NH~----~If~~aGl~v~~Y~Yyd~~~~~~df~~mla~L~~a~~~~ 173 (396)
T COG1448 98 VQTLGGTGALRVAADFLARFFPDATVWISDPTWPNHK----AIFEAAGLEVETYPYYDAETKGLDFDGMLADLKTAPEGS 173 (396)
T ss_pred eecCCcchHHHHHHHHHHHhCCCceEEeCCCCcHhHH----HHHHhcCCceeeeeccccccccccHHHHHHHHHhCCCCC
Confidence 6778999998644 444557778999999999885 6667889988877742 6666666665 3445
Q ss_pred EEEEe-CCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC---CCccCC------CCCCc-cEEEeccccccccCCC
Q 016612 142 LVWVE-SPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS---PVLSRP------LELGA-DIVMHSATKFIAGHSD 207 (386)
Q Consensus 142 ~v~~~-~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~---~~~~~~------~~~~~-di~~~S~sK~~~g~~g 207 (386)
+|++- .+|||||.-.. +++|.++.++.+++-++|-+|.. |.-.+. ...+. -+++.|+||.|+ .-|
T Consensus 174 vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~GleeDa~~lR~~a~~~~~~lva~S~SKnfg-LYg 252 (396)
T COG1448 174 VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADGLEEDAYALRLFAEVGPELLVASSFSKNFG-LYG 252 (396)
T ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccchHHHHHHHHHHHHhCCcEEEEehhhhhhh-hhh
Confidence 66664 77999999874 78899999999999999999742 211111 11122 689999999995 445
Q ss_pred ceEEEE--EEcChhHHH----HHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCC
Q 016612 208 VMAGVL--AVKGERLAK----ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 281 (386)
Q Consensus 208 ~~~G~i--~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 281 (386)
-|+|.+ ++.+.+... .+....+..-++++...+.....-+..- .....+.+....+++.+.+.+ ..+.+.
T Consensus 253 ERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva~IL~~p-~Lra~W~~El~~Mr~Ri~~mR---~~lv~~ 328 (396)
T COG1448 253 ERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVATILNNP-ELRAEWEQELEEMRQRILEMR---QALVDA 328 (396)
T ss_pred hccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHH---HHHHHH
Confidence 677763 333333322 3344444444454444444443333332 122333333333333333322 111111
Q ss_pred CCC-CCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCccee
Q 016612 282 LPE-HPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSI 324 (386)
Q Consensus 282 l~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi 324 (386)
|.. .+... ++....+.+||++.=-.++...++.++..++.+
T Consensus 329 L~~~~~~~~--f~~i~~Q~GMFsy~Gls~~QV~rLree~~IY~v 370 (396)
T COG1448 329 LKALGAPRN--FDFIISQRGMFSYTGLSPEQVDRLREEFGIYLV 370 (396)
T ss_pred HHhhCCCcc--cchHhhcCceeecCCCCHHHHHHHHHhccEEEe
Confidence 211 00000 001123567888764445556777777666544
No 327
>PRK07678 aminotransferase; Validated
Probab=99.54 E-value=7e-13 Score=126.38 Aligned_cols=295 Identities=17% Similarity=0.166 Sum_probs=166.8
Q ss_pred CCchHHHHHHHHHhhcCCC-ceEEeCcHHHHHHHHHHh----c--C--C-CCEEEecCCCCCcHHHHHhhhccc------
Q 016612 53 GNPTRDALESLLAKLDKAD-RALCFTSGMAALAAVTHL----L--G--T-GEEIVAGDDLYGGTDRLLSRVTPK------ 116 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~-~~i~~~~gt~al~~~~~~----~--~--~-g~~Vlv~~~~~~~~~~~~~~~~~~------ 116 (386)
.++...++.+.+.++++.. ...+++||++|+.+.+.+ . + + ..+|+.-...|++...........
T Consensus 87 ~~~~~~~lae~l~~~~~~~~~v~f~~sGseA~e~AlklAr~~t~~~g~~~r~~ii~~~~~yHG~t~~als~~~~~~~~~~ 166 (451)
T PRK07678 87 SHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAFKIARQYHAQKGEPHRYKFISRYRAYHGNSMGALAATGQAQRKYK 166 (451)
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCccHHHhhcCCCcccccc
Confidence 3455566777777776544 567778999998633221 1 1 2 256787777776653221111100
Q ss_pred C---CcEEEEeCCC--------------C---HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHc
Q 016612 117 T---GVVVKRVNTC--------------D---LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 117 ~---g~~~~~v~~~--------------d---~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~ 168 (386)
+ ...+..++.. + ++++++.+. +++.+|+++......|.+.+ ++++.++|++|
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPiqg~gG~~~~~~~fl~~lr~lc~~~ 246 (451)
T PRK07678 167 YEPLAPGFLHVPPPDCYRMPGIESEDIYDLECVKEIDRVMTWELSETIAAVIMEPIITGGGVLMPPQDYMKAVKEICQKH 246 (451)
T ss_pred cCCCCCCCEEeCCCccccccccCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHc
Confidence 0 0011222211 1 223455553 57899999988877777764 89999999999
Q ss_pred CCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh------hhhcCCCCC
Q 016612 169 GALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL------QNAEGSGLA 236 (386)
Q Consensus 169 ~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~------~~~~~~~~~ 236 (386)
|+++|+||++. .|-.. ......+|+++ ++|.+++. .+.+|.++++ +++.+.+..- ......+.+
T Consensus 247 g~llI~DEV~tGfGRtG~~~~~~~~gv~PDivt--~gK~lggG-~~Pi~av~~~-~~i~~~~~~~~~~~~~~h~~T~~gn 322 (451)
T PRK07678 247 GALLISDEVICGFGRTGKAFGFMNYGVKPDIIT--MAKGITSA-YLPLSATAVK-KEIYEAFKGKGEYEHFRHVNTFGGN 322 (451)
T ss_pred CCEEEEeehhhcCCcCchhHHHHhcCCCCCEEE--eecccccC-CcceeEEEEc-HHHHHHHhccCcccccccCCCCCcC
Confidence 99999999984 33221 12334579886 59999652 2457888876 4566544321 122333556
Q ss_pred hhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC---------
Q 016612 237 PFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------- 307 (386)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------- 307 (386)
+...+++...++.+.. +...++.+.+.+++.+.- ...+..++.. .+.++.|.++.+.+.
T Consensus 323 p~~~aaa~a~l~~l~~--~~~~~~~~~~g~~l~~~l------~~~~~~~~~v----~~vrg~Gl~~~i~~~~~~~~~~~~ 390 (451)
T PRK07678 323 PAACALALKNLEIMEN--ENLIERSAQLGELLLEQL------KEELGEHPLV----GDIRGKGLLVGIELVNDKETKEPA 390 (451)
T ss_pred HHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHH------HHHHhcCCCE----EEEEeeceEEEEEEecCCcccCcC
Confidence 6666666666654432 233344444444433211 0001111110 122567888888872
Q ss_pred CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 308 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 308 ~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
+.....++...+..+|+.+...+.. + | ...+.+|+++. .++++++++.+.++|++
T Consensus 391 ~~~~a~~i~~~l~~~Gv~~~~~g~~--v--~-----------------~~~~~lrl~Ppl~it~~eid~~~~~l~~~l~~ 449 (451)
T PRK07678 391 DNDKVASVVAACKEKGLIIGKNGDT--V--A-----------------GYNNVLTLSPPLVISSEEIAFIVGTLKTALER 449 (451)
T ss_pred chHHHHHHHHHHHHCCcEEeecCcc--c--c-----------------CCCCEEEEECCCcCCHHHHHHHHHHHHHHHHh
Confidence 2234567777888888765431100 0 0 01245999864 47788888888888865
Q ss_pred C
Q 016612 384 G 384 (386)
Q Consensus 384 ~ 384 (386)
.
T Consensus 450 ~ 450 (451)
T PRK07678 450 I 450 (451)
T ss_pred c
Confidence 3
No 328
>PRK09221 beta alanine--pyruvate transaminase; Provisional
Probab=99.54 E-value=6.4e-13 Score=126.35 Aligned_cols=286 Identities=17% Similarity=0.203 Sum_probs=161.0
Q ss_pred CchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHh---c----C--CCCEEEecCCCCCcHHHHHhhhc------cc
Q 016612 54 NPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHL---L----G--TGEEIVAGDDLYGGTDRLLSRVT------PK 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~---~----~--~g~~Vlv~~~~~~~~~~~~~~~~------~~ 116 (386)
++...++.+.|.+++. .+...+++||++|+.+.+.+ . . ...+|+.-...|++.......+. ..
T Consensus 91 ~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~gals~~~~~~~~~~ 170 (445)
T PRK09221 91 HPLAFELAERLAELAPGGLDHVFFTNSGSESVDTALKIALAYHRARGQGTRTRLIGRERGYHGVGFGGISVGGIVNNRKM 170 (445)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCccchhhhccCCChhhhhc
Confidence 4455566777777663 34678889999998643321 1 1 13468777777766421100110 00
Q ss_pred C---CcEEEEeCCC------------------CHHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHH
Q 016612 117 T---GVVVKRVNTC------------------DLDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 117 ~---g~~~~~v~~~------------------d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 167 (386)
+ ...+..++.. ..+++++.+. +++.+|+++......|.+.| +++|.++|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAavi~Epv~g~~G~~~~~~~yl~~l~~lc~~ 250 (445)
T PRK09221 171 FGGLLPGVDHLPHTLDLPENAFSKGQPEHGAELADDLERLVALHDASTIAAVIVEPMAGSAGVLVPPKGYLQRLREICDK 250 (445)
T ss_pred cCCCCCCCeEeCCCccccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCCCcccCCHHHHHHHHHHHHH
Confidence 0 0112222211 1346666653 56889999999888899887 9999999999
Q ss_pred cCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHH-------hhhhcCCC
Q 016612 168 HGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF-------LQNAEGSG 234 (386)
Q Consensus 168 ~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~-------~~~~~~~~ 234 (386)
+|+++|+||+++ .|-.. ......+|+++ ++|.+++. .+.+|.++++ +++.+.+.. .......+
T Consensus 251 ~g~llI~DEV~tG~GRtG~~~~~~~~gv~PDi~~--~gK~l~gG-~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~T~~ 326 (445)
T PRK09221 251 HGILLIFDEVITGFGRLGAAFAAERFGVTPDIIT--FAKGLTNG-AIPMGAVIAS-DEIYDAFMQGPEYAIEFFHGYTYS 326 (445)
T ss_pred cCCEEEEeehhhCCCcCchhhHHHhcCCCCCEEE--eccccccC-cccceeeEEc-HHHHHhhccCcccccccccccCCC
Confidence 999999999984 33221 11223468774 69998641 1235777776 456554421 11112234
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-----H
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----L 309 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-----~ 309 (386)
.++...++++..++.+.. +...++.+.+.+++++.-. .+..++. ..+.++.|.+..+.+.. .
T Consensus 327 ~~pl~~aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~l~-------~l~~~~~----v~~vrg~Gl~~~v~~~~~~~~~~ 393 (445)
T PRK09221 327 AHPVACAAGLATLDIYRE--EDLFERAAELAPYFEDAVH-------SLKGLPH----VIDIRNIGLVAGIELAPRPGAPG 393 (445)
T ss_pred cCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH-------hhccCCC----EEEEecCceEEEEEEeccccccc
Confidence 455555555555543322 2334455555554443110 0111110 01225667777776632 1
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
....++.+.+..+|+.++.+. +.+|+++. .++++++++.|+++|+++
T Consensus 394 ~~~~~~~~~~~~~Gv~~~~~~----------------------------~~lr~~Ppl~~t~~eid~~~~~l~~~l~~~ 444 (445)
T PRK09221 394 ARGYEAFMKCFEKGLLVRYTG----------------------------DTIALSPPLIIEKAQIDELVDALGDALRAV 444 (445)
T ss_pred chHHHHHHHHHHCCeEEeecC----------------------------CEEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 124567777777787654321 23888864 478888888888888653
No 329
>PRK06149 hypothetical protein; Provisional
Probab=99.54 E-value=5.8e-13 Score=137.99 Aligned_cols=326 Identities=16% Similarity=0.158 Sum_probs=186.2
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhc--CCCceEEeCcHHHHHHHHHH-
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD--KADRALCFTSGMAALAAVTH- 88 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~--g~~~~i~~~~gt~al~~~~~- 88 (386)
+.+++..+...+|..+|.+.++....... .. ..++...+...++.+.|++++ +.+.+.+++||++|..+.+.
T Consensus 586 ~ylD~~~~~~~lGh~hp~v~~Ai~~q~~~----l~-~~~~~~~~~~~elae~L~~~~p~~~~~v~f~~SGsEA~e~Alkl 660 (972)
T PRK06149 586 SYLDMVNNVTVLGHGHPRLAAAAARQWSL----LN-TNSRFHYAAVAEFSERLAALAPDGLDTVFLVNSGSEANDLAIRL 660 (972)
T ss_pred EEEECCCCccccCCCCHHHHHHHHHHHHh----cc-ccccccCHHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHH
Confidence 34444422234676777766543221111 10 111223456778888888887 34578889999999864333
Q ss_pred --hcCCCCEEEecCCCCCcHHHHHhhhc-c---c--------CCcEEEEeC------C--CC-----HHHHHhhh-----
Q 016612 89 --LLGTGEEIVAGDDLYGGTDRLLSRVT-P---K--------TGVVVKRVN------T--CD-----LDEVASAI----- 136 (386)
Q Consensus 89 --~~~~g~~Vlv~~~~~~~~~~~~~~~~-~---~--------~g~~~~~v~------~--~d-----~~~l~~~~----- 136 (386)
.......|++.+..|++.......+. . . .++.....+ . .+ .+++++.+
T Consensus 661 Ar~~tgr~~ii~~~~~yHG~t~ga~~~s~~~~~~~~~~~~~~~~v~~~~~p~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 740 (972)
T PRK06149 661 AWAASGRRDVVSVLEAYHGWTVATDAVSTSIADNPQALETRPDWVHPVESPNTYRGRFRGADSAADYVRDVVAQLEELDA 740 (972)
T ss_pred HHHhcCCCeEEEEeCCCCCcChhHhhhcCCccccccccCCCCCCeEEeCCCcccCCcCCCcccHHHHHHHHHHHHHHHhh
Confidence 23334567776666665321110110 0 0 011111111 1 11 23333332
Q ss_pred -CCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCC-CCCCccCC------CCCCccEEEecccccccc
Q 016612 137 -GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSI-MSPVLSRP------LELGADIVMHSATKFIAG 204 (386)
Q Consensus 137 -~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~-~~~~~~~~------~~~~~di~~~S~sK~~~g 204 (386)
.+++.+|+++......|.+.+ +++|.++|++||+++|+||++ +.|-.... .....|++ +++|.+++
T Consensus 741 ~~~~iAavI~Epv~g~gG~i~~p~~yL~~l~~lc~~~g~llI~DEV~tGfGRtG~~~~a~e~~gv~PDiv--t~gK~lg~ 818 (972)
T PRK06149 741 SGRGLAGFICEPVYGNAGGIALPPGYLQQVYAAVRARGGVCIADEVQVGYGRLGHYFWGFEQQGVVPDII--TMAKGMGN 818 (972)
T ss_pred cCCceEEEEEcccccCCCcccCCHHHHHHHHHHHHHcCCEEEEEeehhcCCccCccchhhhhcCCCCCEE--EecccccC
Confidence 257889999988887888877 999999999999999999998 34433321 23457888 46999964
Q ss_pred CCCceEEEEEEcChhHHHHHHHhh-hhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCC
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLP 283 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~ 283 (386)
|+.+|+++++ +++.+.+.... ...+.+.++..+++.+..++.+.. +.+.++++.+.+++.+.-. . + ..
T Consensus 819 --G~Pl~av~~~-~~i~~~~~~~~~~~sT~~gnP~~~aaala~L~~i~~--e~l~~~~~~~G~~l~~~L~--~-l---~~ 887 (972)
T PRK06149 819 --GHPLGAVITR-REIAEALEAEGYFFSSTGGSPVSCRIGMAVLDVLRE--EKLQENARRVGDHLKARLE--A-L---AD 887 (972)
T ss_pred --CeeeEEEEEc-HHHHhhhccCCcccCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH--H-H---HH
Confidence 4567888886 55665553211 122345677777777666654432 3456666555555543210 0 0 01
Q ss_pred CCCchhhhhhccCCCCceEEEEeC--------CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 284 EHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 284 ~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
.++- ....++.|.++.+.+. .......+.+.+..+|+.+.+.+.
T Consensus 888 ~~~~----i~~vrG~Gl~~gvel~~~~~~~~~~~~~~~~i~~~l~~~Gvl~~~~g~------------------------ 939 (972)
T PRK06149 888 RHPL----IGAVHGMGLYLGVELVRDRQTLEPATEETAAICDRLLELGVIMQPTGD------------------------ 939 (972)
T ss_pred hCCC----eEEEeecceEEEEEEecCcccCCCChHHHHHHHHHHHhCCeEEeecCC------------------------
Confidence 1110 1223678888888872 223456778888888886543211
Q ss_pred CCCCeEEEEe----ccCChHHHHHHHHHHHhcC
Q 016612 356 LTEDLVRISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 356 ~~~~~iRis~----~~~~~~~~i~~l~~~l~~~ 384 (386)
..+.+|+.. +.++++++++.+.++|.+.
T Consensus 940 -~~~vl~~~Ppl~it~~~id~~~~~l~~~l~~~ 971 (972)
T PRK06149 940 -HLNILKIKPPLCLDRESADFFVDMLDRVLTEG 971 (972)
T ss_pred -CCCEEEEECCCcCCHHHHHHHHHHHHHHHHhh
Confidence 134577755 4588999999999988753
No 330
>PRK07046 aminotransferase; Validated
Probab=99.53 E-value=1.2e-12 Score=124.59 Aligned_cols=282 Identities=16% Similarity=0.102 Sum_probs=164.2
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHH-HHhhhc--------ccCC-----
Q 016612 56 TRDALESLLAKLDKADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDR-LLSRVT--------PKTG----- 118 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~-~~~~~~--------~~~g----- 118 (386)
...++.+.+.+.++.+...+++|||+|....+. .....++|+.-+..|++... .+.... ...|
T Consensus 116 ~~~~lAe~l~~~~~~~~v~F~nSGtEA~e~AlrlAR~~TGr~~ii~~~g~YHG~~d~~l~~~~~~~~~~~~~~~g~~~~~ 195 (453)
T PRK07046 116 DAAWVGEELARRFGLPYWQVATTATDANRFVLRWARAVTGRPKILVFNGCYHGTVDDVFVDLVDGRPVQRPGLLGQVHDL 195 (453)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCcHHhHhhccCCCCCCCCCCCCCCccc
Confidence 344455566666666788899999998753332 23345678877777777521 111110 0011
Q ss_pred -cEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC----CCCccCCCC
Q 016612 119 -VVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM----SPVLSRPLE 188 (386)
Q Consensus 119 -~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~----~~~~~~~~~ 188 (386)
..+..++..|++++++.+. +++.+|+++......|.+.| ++++.++|+++|+++|+||++. .+-......
T Consensus 196 ~~~~~~~~~nd~~~l~~~l~~~~vAavi~EPi~g~~G~~~p~~~fl~~lr~lc~~~g~llI~DEV~tfr~g~Gg~~~~~g 275 (453)
T PRK07046 196 TATTRVVEFNDLAALEAALADGDVAAVLAEPAMTNIGMVLPEPGFHEALRELTRRYGTLLVIDETHTISSGPGGYTRAHG 275 (453)
T ss_pred cCceEeeCCCCHHHHHHHhCCCCeEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHhCCEEEEEccccCccCCcchhHHhC
Confidence 1244556669999998885 57889999988877787765 8999999999999999999985 222222224
Q ss_pred CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---------hhcCCCCChhhHHHHHhcCCcHHH--HHHHH
Q 016612 189 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---------NAEGSGLAPFDCWICLRGVKTMAL--RVEKQ 257 (386)
Q Consensus 189 ~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 257 (386)
..+|+++ ++|.++| |+.+|.++++ +++.+.+.... .....+.++...++.+..++.+.. ..++.
T Consensus 276 v~PDi~t--~gK~lgg--G~Pi~av~g~-~~i~~~~~~~~~~~~~~~~~~~~T~~gnpl~~aa~~a~L~~l~~~~~~~~~ 350 (453)
T PRK07046 276 LEPDFLV--VGKPIAG--GVPCAVYGFS-AELAERAQAAKASAPPGHSGIGTTLSANALAMAAMRATLAEVMTEAAYAHM 350 (453)
T ss_pred CCcccee--ehhhhcC--CCcceeeeeh-HHHHHHHhhccccCCCCCceeCCCCcccHHHHHHHHHHHHHHhcccHHHHH
Confidence 4678886 6999975 4668888886 55665543210 111224455565555555443311 12222
Q ss_pred HHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--------------CHHhHHHHHhhcCcce
Q 016612 258 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------------SLALSKHVVETTKYFS 323 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------------~~~~~~~l~~~l~~~g 323 (386)
.+..+.+.+.+++.. .+.+-. ...++.|.++.+.+. +......+...+..+|
T Consensus 351 ~~~g~~l~~~L~~l~----------~~~~~~----~~v~g~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 416 (453)
T PRK07046 351 LALAARLAAGLRAVI----------ARHGLP----WHVTRVGARVEFQFAPTPPRNGAEAAAALDPELEAALHLYLLNRG 416 (453)
T ss_pred HHHHHHHHHHHHHHH----------HhCCCC----eEEEEeCcEEEEEEeCCCCCCHHHHhcccCHHHHHHHHHHHHHCC
Confidence 333333333333210 000000 011345666666542 1223345555666667
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhcC
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~~ 384 (386)
+.+.+. .+.++++. +.+++++.++.+.++|+..
T Consensus 417 v~~~~~----------------------------~~~~~~~p~~t~~did~~~~~~~~~l~~~ 451 (453)
T PRK07046 417 VLITPF----------------------------HNMMLVCPATTAADVDRLVAAFDACLGEL 451 (453)
T ss_pred CEEecc----------------------------cCcEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 654321 11266665 4588899999999988764
No 331
>TIGR01365 serC_2 phosphoserine aminotransferase, Methanosarcina type. This model represents a variant form of the serine biosynthesis enzyme phosphoserine aminotransferase, as found in a small number of distantly related species, including Caulobacter crescentus, Mesorhizobium loti, and the archaeon Methanosarcina barkeri.
Probab=99.53 E-value=1.7e-12 Score=119.76 Aligned_cols=275 Identities=16% Similarity=0.123 Sum_probs=170.5
Q ss_pred chHHHHHHHHHhhcCCC--c--eEEeCcHHHHHH-HHHHhc-CCCCEEEecCCCCCcHHHHHh-hhcccCCc-EEEEeCC
Q 016612 55 PTRDALESLLAKLDKAD--R--ALCFTSGMAALA-AVTHLL-GTGEEIVAGDDLYGGTDRLLS-RVTPKTGV-VVKRVNT 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~--~i~~~~gt~al~-~~~~~~-~~g~~Vlv~~~~~~~~~~~~~-~~~~~~g~-~~~~v~~ 126 (386)
.+.+++++.|.++++.+ . .++.+|||.++. ++..++ ++|+.|++.. .|+ - -|. .+++..|+ ++..++.
T Consensus 39 ~i~~e~~~~L~~l~~~~~~~~v~~l~GsGT~a~Eaa~~nl~~~~g~~vLv~g-~FG-~--r~~~eia~~~g~~~v~~l~~ 114 (374)
T TIGR01365 39 EKLAEAIKKTREMLGVPADYLIGIVPASDTGAVEMALWSMLGCRGVDVLAWE-SFG-K--GWVTDVTKQLKLPDVRVLEA 114 (374)
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEECCchHHHHHHHHHHcCCCCCCeEEEEC-HHH-H--HHHHHHHHhcCCCCcEEEcC
Confidence 36788899999999864 2 345677889997 556677 5888898854 333 2 233 77788888 4555553
Q ss_pred C-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccc
Q 016612 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKF 201 (386)
Q Consensus 127 ~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~ 201 (386)
. ++++++. + +.|+++|....||...|++++.+.+ ++.++|+|.+.+.+..+-..+ +.|+++.|.+|.
T Consensus 115 ~~g~~~~~~~ve~--~---~~v~~vhnETSTGv~npv~~i~~~~--~~~lliVDavSs~g~~~l~~d-~iDv~~tgsQK~ 186 (374)
T TIGR01365 115 EYGKLPDLKKVDF--K---NDVVFTWNGTTSGVRVPNGDFIPAD--REGLTICDATSAAFAQDLDYH-KLDVVTFSWQKV 186 (374)
T ss_pred CCCCCCCHHHcCC--C---CCEEEecCCCchheecccccccccc--CCCcEEEEccchhcCCCCChh-HCcEEEEechhc
Confidence 2 6777763 1 2367889999999999997666332 489999999988776653333 599999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHH--------H-hh---------hhc-C-C-CCChh-hHHHHHhcC------CcHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELY--------F-LQ---------NAE-G-S-GLAPF-DCWICLRGV------KTMALR 253 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~--------~-~~---------~~~-~-~-~~~~~-~~~~~~~~~------~~~~~~ 253 (386)
+++|+| .++++.+++.+.+.-. . +. ... + + ..++. ..+++...+ ..+..+
T Consensus 187 L~~ppG--ls~v~vs~~Al~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~t~~TP~v~~l~a~~~~l~~i~~egGle~~ 264 (374)
T TIGR01365 187 LGGEGA--HGMLILSPRAVARLESYTPAWPLPKIFRLTKGGKLNKKIFEGSTINTPSMLCVEDWLDALKWAESIGGLKPL 264 (374)
T ss_pred cCCCCc--eEEEEECHHHHHHHhhcCCCCCChhhhccccccchhhhhhcCCCCCChHHHHHHHHHHHHHHHHHccCHHHH
Confidence 999998 6899988665533111 0 00 000 1 1 11111 112112222 246777
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC-ceEEEEeCCHH-----------hHHHHHhhcCc
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG-SVLSFLTGSLA-----------LSKHVVETTKY 321 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~-~~~~~~~~~~~-----------~~~~l~~~l~~ 321 (386)
.++..++++.+.+.+++...+ .-+.. .+..++ .++++.++++. +..++.+.++.
T Consensus 265 ~~Rh~~~a~~l~~~l~~lg~l-----~~~~~---------~~~~rS~tvt~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 330 (374)
T TIGR01365 265 IARADDNLAVLEAFVAKNNWI-----HFLAE---------TPEIRSNTSVCLKVVDPAIDALDEDAQADFAKELISTLEK 330 (374)
T ss_pred HHHHHHHHHHHHHHHHHCCCc-----ccCCC---------ChhhcCCCeEEEEeCCccccccccchhhHHHHHHHHHHHH
Confidence 778888888888888876411 01110 001112 23444543321 25778888888
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe-c---cCChHHHHHHHHHH
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G---IEDVNDLISDLDKA 380 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~---~~~~~~~i~~l~~~ 380 (386)
+|+.+..|... ..+..+||+. + .++++.+++.|.=+
T Consensus 331 ~gi~i~~G~~~-----------------------~~~~~fRIg~~G~i~~~di~~l~~~l~~~ 370 (374)
T TIGR01365 331 EGVAYDIGSYR-----------------------DAPSGLRIWCGATVEKSDLECLCPWLDWA 370 (374)
T ss_pred CCEEEeccccc-----------------------cCCCceEEecCCcCCHHHHHHHHHHHHHH
Confidence 88876655531 1235699985 3 36666666665433
No 332
>PRK07481 hypothetical protein; Provisional
Probab=99.53 E-value=5.6e-13 Score=127.00 Aligned_cols=286 Identities=19% Similarity=0.191 Sum_probs=163.0
Q ss_pred CchHHHHHHHHHhhcC---CCceEEeCcHHHHHHHHHHh----c----CC-CCEEEecCCCCCcHH-HHHhhhcc-----
Q 016612 54 NPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTHL----L----GT-GEEIVAGDDLYGGTD-RLLSRVTP----- 115 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~~~~~----~----~~-g~~Vlv~~~~~~~~~-~~~~~~~~----- 115 (386)
++...++.+.|.++++ .+...+++||++|+.+.+.+ . ++ ..+|+.-...|++.. ..+ .+..
T Consensus 85 ~~~~~~lae~L~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~t~ga~-s~~~~~~~~ 163 (449)
T PRK07481 85 HPRAIELSYELIDMFAPEGMRRVFFSSGGSDSVETALKLARQYWKVRGQPERTKFISLKQGYHGTHFGGA-SVNGNTVFR 163 (449)
T ss_pred CHHHHHHHHHHHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhh-ccCCCcccc
Confidence 3556667777777763 24677889999998643332 1 12 356777777776642 221 1110
Q ss_pred ------cCCcEEEEeC------C--CCHHH--------HHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHH
Q 016612 116 ------KTGVVVKRVN------T--CDLDE--------VASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMA 165 (386)
Q Consensus 116 ------~~g~~~~~v~------~--~d~~~--------l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la 165 (386)
..|......+ . .|+++ +++.+. +++.+|+++......|.+.+ +++|.++|
T Consensus 164 ~~~~~~~~g~~~~~~~~~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~iAAviiEPvqg~gG~~~~~~~fl~~lr~lc 243 (449)
T PRK07481 164 RNYEPLLPGCFHVETPWLYRNPFTEQDPEELARICARLLEREIAFQGPDTIAAFIAEPVQGAGGVIVPPANFWPLVREVC 243 (449)
T ss_pred cccCCCCCCCEEeCCCcccccccCCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEEecccCCcCCccCCHHHHHHHHHHH
Confidence 0122211111 1 13333 333332 57899999998887787764 89999999
Q ss_pred HHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHh-------hhhc
Q 016612 166 HAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL-------QNAE 231 (386)
Q Consensus 166 ~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~-------~~~~ 231 (386)
++||+++|.||++.. |-.. ......+|+++. +|.+++ | +.+|.++++ +++.+.+..- ....
T Consensus 244 ~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~g--G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~ 318 (449)
T PRK07481 244 DRHGILLIADEVVTGFGRTGSWFGSRGWGVKPDIMCL--AKGITS--GYVPLGATMVN-ARIADAFEANADFGGAIMHGY 318 (449)
T ss_pred HHcCCEEEEeehhhCcCcCchhhHhhhcCCCCCEEEE--eecccC--CCcCceEEEEc-HHHHHHHhccCccccccccCC
Confidence 999999999999752 2211 122345788865 999865 3 246777776 4566554321 1122
Q ss_pred CCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC---
Q 016612 232 GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--- 308 (386)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--- 308 (386)
..+.++...+++...++.+.. +...++++.+.+++.+.-. . +. ..++ ...+.++.|.++.+.+..
T Consensus 319 T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~--~-l~---~~~~----~i~~vrG~Glm~gi~l~~~~~ 386 (449)
T PRK07481 319 TYSGHPVACAAALATLDIVVR--EDLPANAAKRGAYLLEGLQ--P-LK---ERFE----LVGDVRGKGLMLALDLVADKA 386 (449)
T ss_pred CCCCCHHHHHHHHHHHHHHHh--hhHHHHHHHHHHHHHHHHH--H-Hh---hcCC----CeEEEeecceEEEEEeccccc
Confidence 233456666666555554322 2344444444444432110 0 00 0111 011236778888888721
Q ss_pred --------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHH
Q 016612 309 --------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISD 376 (386)
Q Consensus 309 --------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~ 376 (386)
......+...+..+|+.+.+.+ +.+|++. +.++++++++.
T Consensus 387 ~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~g----------------------------~~i~l~Ppl~it~~eid~~~~~ 438 (449)
T PRK07481 387 TREPIDPSKGYANAVADVARENGVLVRPSG----------------------------TKIILSPPLVIQREDVDRIVDA 438 (449)
T ss_pred ccCCCCchhHHHHHHHHHHHhCCeEEEecC----------------------------CEEEEECCCCCCHHHHHHHHHH
Confidence 1234567777777787654321 1267774 45889999999
Q ss_pred HHHHHhcCC
Q 016612 377 LDKALRTGP 385 (386)
Q Consensus 377 l~~~l~~~~ 385 (386)
+.++|+++.
T Consensus 439 l~~~l~~~~ 447 (449)
T PRK07481 439 LDAGLSAVP 447 (449)
T ss_pred HHHHHHhcc
Confidence 999987753
No 333
>PRK07482 hypothetical protein; Provisional
Probab=99.52 E-value=5.3e-13 Score=127.47 Aligned_cols=288 Identities=14% Similarity=0.119 Sum_probs=165.1
Q ss_pred CCchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHhc-------C--CCCEEEecCCCCCcHHHHHhhhc------c
Q 016612 53 GNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHLL-------G--TGEEIVAGDDLYGGTDRLLSRVT------P 115 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~~-------~--~g~~Vlv~~~~~~~~~~~~~~~~------~ 115 (386)
.++...++.+.|.+... .+...+++||++|+.+.+.+. . ...+|+.-...|++.......+. .
T Consensus 92 ~~~~~~~lAe~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~~Ii~~~~~YHG~t~ga~s~~~~~~~~~ 171 (461)
T PRK07482 92 GTEASITLSKRIIDRAPAGMSKVYYGLSGSDANETQIKLVWYYNNVLGRPEKKKIISRWRGYHGSGVVTGSLTGLSLFHQ 171 (461)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCceEEEecCccCCccHhhhhccCCchhhh
Confidence 34567778888888764 346778899999986443321 1 13568877777766421100110 0
Q ss_pred cCC---cEEEEeCCC------------------CHHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHH
Q 016612 116 KTG---VVVKRVNTC------------------DLDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAH 166 (386)
Q Consensus 116 ~~g---~~~~~v~~~------------------d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~ 166 (386)
.++ ..+..++.. +++++++.+. +++.+|+++......|.+.+ +++|.++|+
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~iAAvi~EPvqg~gG~~~~~~~yl~~lr~lc~ 251 (461)
T PRK07482 172 HFDLPIARVLHTEAPHYYRRADAGMSEEQFSAYCADELEELILAEGPDTIAAFIAEPVLGTGGIVPPPAGYWPAIQAVLK 251 (461)
T ss_pred ccCCCCCCCEEcCCCccccccccCCCHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCccCCCCCcCCCHHHHHHHHHHHH
Confidence 011 111122111 3466777663 56899999988877777753 899999999
Q ss_pred HcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCc-eEEEEEEcChhHHHHHHHh-------hhhcC
Q 016612 167 AHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFL-------QNAEG 232 (386)
Q Consensus 167 ~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~-~~G~i~~~~~~~~~~~~~~-------~~~~~ 232 (386)
+||+++|+||++.. |-.. ......+|+++ ++|.++| |. .+|.++++ +++.+.+... .....
T Consensus 252 ~~giLlI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gKgl~g--G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T 326 (461)
T PRK07482 252 KYDILLIADEVVTGFGRLGSMFGSDHYGIEPDLIT--VAKGLTS--AYAPLSGSIVG-EKVWDVLEQGSDEHGAIGHGWT 326 (461)
T ss_pred HhCCEEEEeccccCCCcCcchhhHHhcCCCCCEEE--Ecccccc--Cccccceeeec-HHHHHHHhcccccCCccccCCC
Confidence 99999999999752 2221 12234679997 4999965 32 35666666 4455544311 11222
Q ss_pred CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-H--
Q 016612 233 SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L-- 309 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~-- 309 (386)
.+.++...+++...++.+.. +...++++.+.+++.+.-. .....++. ..+.++.|.++.+.+.. .
T Consensus 327 ~~gnpl~~Aaa~a~L~~~~~--~~l~~~~~~~g~~l~~~L~------~l~~~~~~----v~~vrG~Glm~giel~~~~~~ 394 (461)
T PRK07482 327 YSGHPICAAAALANLDILER--ENLVGNAAEVGAYFRARLR------AAFGDHPL----VGEVRGVGMLAAVEFVADRDD 394 (461)
T ss_pred CCcCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH------HHHhcCCC----EEEEeeceeEEEEEeccCCCc
Confidence 34566666666665554322 2344555555554443210 00111111 01236778888888731 1
Q ss_pred --------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHH
Q 016612 310 --------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDL 377 (386)
Q Consensus 310 --------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l 377 (386)
....++...+..+|+.+..+. ..+.+|+.+. .++++++++.+
T Consensus 395 ~~~~~~~~~~~~~i~~~~~~~Gvl~~~~~--------------------------~~~~i~~~Ppl~it~~ei~~~~~~l 448 (461)
T PRK07482 395 RTPFDPALKIGPQVSAAALERGVIARAMP--------------------------HGDILGFAPPLVLTRAEADEIVAIA 448 (461)
T ss_pred CCCCChhhHHHHHHHHHHHHCCcEEecCC--------------------------CCCEEEEeCCCCCCHHHHHHHHHHH
Confidence 124567777777777543211 0233777654 58888888888
Q ss_pred HHHHhc
Q 016612 378 DKALRT 383 (386)
Q Consensus 378 ~~~l~~ 383 (386)
.++|++
T Consensus 449 ~~~l~~ 454 (461)
T PRK07482 449 KDAVDE 454 (461)
T ss_pred HHHHHH
Confidence 888865
No 334
>PLN02452 phosphoserine transaminase
Probab=99.52 E-value=7.2e-13 Score=122.16 Aligned_cols=275 Identities=13% Similarity=0.086 Sum_probs=174.0
Q ss_pred chHHHHHHHHHhhcCCC---ceEEe-CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC---C
Q 016612 55 PTRDALESLLAKLDKAD---RALCF-TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN---T 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~---~~i~~-~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~---~ 126 (386)
.+.+++++.+.++++.+ +.+++ +|||.++. +++.++.+|+++++...++.+-. +...++.+|...+... .
T Consensus 52 ~i~~~~~~~L~~l~~~p~~y~v~~l~Gsgt~~~ea~~~nl~~~~~~~l~~~~G~fg~r--~~~~a~~~g~~~~~~~~~~~ 129 (365)
T PLN02452 52 SIIQKAEADLRELLDIPDNYEVLFLQGGASTQFAAIPLNLCKPGDKADFVVTGSWSKK--AAKEAKKYCKTNVIASGKDE 129 (365)
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEeCccHHHHHHHHHhcCCCCCeEEEEECCHHHHH--HHHHHHHhCCCcEEEecCCC
Confidence 36888999999999864 34444 56678887 45668889999887765554442 3466777776444331 1
Q ss_pred -----CCHHHHHhhhCCCceEEEEeCCCCCCccc-ccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccc
Q 016612 127 -----CDLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSAT 199 (386)
Q Consensus 127 -----~d~~~l~~~~~~~~~~v~~~~~~nptG~~-~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~s 199 (386)
.++++++ .+++.+.|.+++....||.. .|++++. ++++++|.+++.+..+ +..+++.|+ .|.+
T Consensus 130 ~~~~~~~~~~~~--~~~~~~~v~~~hnETstGv~~~~~~~i~------~~~lvVDa~Ss~g~~pidv~~~~v~~--~saq 199 (365)
T PLN02452 130 KYTKIPSVSEWE--LTPDAKFVHICANETIHGVEFKDYPDVG------NVPLVADMSSNFLSKPVDVSKYGVIY--AGAQ 199 (365)
T ss_pred CCCCCCChHHcC--CCCCCcEEEECCCCCCCcEecCcccccC------CCeEEEECCccccCcccCHHHcCEEE--Eecc
Confidence 2444442 23578899999999999995 7777764 3899999999888764 334455544 6999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHh-----------hhhcCCCCCh-hhHHHHHhcCC------cHHHHHHHHHHHH
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYFL-----------QNAEGSGLAP-FDCWICLRGVK------TMALRVEKQQDNA 261 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~------~~~~~~~~~~~~~ 261 (386)
|.+ ||+| .|+++++++.+.+ .... ......+.++ ...+++..+++ .+..+.++..+.+
T Consensus 200 K~l-GP~G--l~~v~vr~~~l~~-~~~~~~~~~~~~~~~~~~s~~~TP~v~~i~~l~~aL~~l~~~gGl~~~~~r~~~~a 275 (365)
T PLN02452 200 KNV-GPSG--VTIVIIRKDLIGN-ARPITPGMLDYKIHAENDSLYNTPPCFGIYMCGLVFEDLLAQGGLKAMEKRNIRKA 275 (365)
T ss_pred ccc-CCCC--eEEEEEcHHHHhh-cccCCCchhhHHHHHhcCCccCChhHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 999 6888 6888888654432 2110 0000011222 22222222222 3445555666677
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
+.+.+.+++...+ +..... .......+++|.+++....++|+++++.+|+..-.|+...
T Consensus 276 ~~l~~~l~~~~G~---y~~~~~----------~~~rs~~~vsF~~~~~~~~~~f~~~~~~~g~~~~~G~r~~-------- 334 (365)
T PLN02452 276 DLLYDAIDESNGF---YVCPVE----------KSVRSLMNVPFTLGGSELEAEFVKEAAKAGMVQLKGHRSV-------- 334 (365)
T ss_pred HHHHHHHHhCCCc---ccCCCC----------hHHhCCeEEEEEcCCchhHHHHHHHHHHCCCcccCCcccc--------
Confidence 7777777764321 111000 0001235788888776788999999999999877776411
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhc
Q 016612 342 SHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~ 383 (386)
.+ +|+|+ ..++++.+++.+++.-++
T Consensus 335 ----------------gg-~R~s~yna~~~~~v~~L~~~m~~f~~~ 363 (365)
T PLN02452 335 ----------------GG-MRASIYNAMPLAGVEKLVAFMKDFQAK 363 (365)
T ss_pred ----------------Cc-eEEECcCCCCHHHHHHHHHHHHHHHHh
Confidence 23 99997 358888888888877654
No 335
>PRK06938 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.52 E-value=7.5e-13 Score=126.30 Aligned_cols=288 Identities=15% Similarity=0.135 Sum_probs=164.5
Q ss_pred CchHHHHHHHHHhhcCCC-----ceEEe-CcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHHHhhhccc------CC
Q 016612 54 NPTRDALESLLAKLDKAD-----RALCF-TSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPK------TG 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~-----~~i~~-~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~------~g 118 (386)
++...++.+.+.+....+ ..+++ +||++|+.+.+.+ .....+|+.-...|++.......+... ++
T Consensus 105 ~~~~~~la~~L~~~~p~~~~~~~~v~f~~~SGSEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~t~~~~~~~~~~ 184 (464)
T PRK06938 105 TPVKDQFVQDLFASLPEAFAREAKIQFCGPTGTDAVEAALKLVKTATGRSTVLSFQGGYHGMSQGALSLMGNLGPKKPLG 184 (464)
T ss_pred CHHHHHHHHHHHHhCcccccccceEEEeCCCcHHHHHHHHHHHHHhhCCCeEEEECCccCCccHHHHhhcCCccccccCC
Confidence 455556666666654322 34454 5999998644332 233467777777776653221121100 00
Q ss_pred ---cEEEEeCCC-----------------CHHHHHhhhC------CCceEEEEeCCCCCCccccc----HHHHHHHHHHc
Q 016612 119 ---VVVKRVNTC-----------------DLDEVASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 119 ---~~~~~v~~~-----------------d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~ 168 (386)
..+..++.. +.+.+++.+. +++.+|+++......|.+.+ ++++.++|++|
T Consensus 185 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPiqg~gG~~~p~~~yl~~lr~lc~~~ 264 (464)
T PRK06938 185 ALLPGVQFLPYPYDYRCPFGLGGEAGVRANLHYLENLLDDPESGVVLPAAVILEVVQGEGGVIPAPIEWLRGLRRITEEA 264 (464)
T ss_pred CCCCCcEEeCCCccccccccCchhhHHHHHHHHHHHHHHhhccCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 112233321 2456777664 25899999988776777654 89999999999
Q ss_pred CCEEEEeCCCCC----CCcc--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 169 GALLLVDNSIMS----PVLS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 169 ~~~li~D~a~~~----~~~~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
|+++|.||++.. |.+. ......+|+++. +|.++| |+.+|.++++++ + +.+.........+.++...++
T Consensus 265 giLlI~DEV~tGfGRtG~~~a~e~~gv~PDiv~~--gKglgg--G~PlsAv~~~~~-~-~~~~~~~~~~T~~gnpla~Aa 338 (464)
T PRK06938 265 GIPLIVDEIQSGFGRTGKMFAFEHAGIIPDVVVL--SKAIGG--SLPLAVVVYREW-L-DTWQPGAHAGTFRGNQMAMAA 338 (464)
T ss_pred CCEEEEeccccCCCcCcHHHHHHhcCCCCCEEEe--eccccC--CCceEEEeehhH-h-hccCCCCCCCCCCcCHHHHHH
Confidence 999999999752 2211 122346799875 999864 466888887643 3 322111122223455666666
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--------------
Q 016612 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------- 308 (386)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------------- 308 (386)
++..++.+.. +...++++.+.+++.+.-. . + .+.++. ..+.++.|.++.+.+..
T Consensus 339 a~a~L~~l~~--~~l~~~~~~~G~~l~~~L~--~-l---~~~~~~----i~~VrG~Glm~gie~~~~~~~~~~~~~~~~~ 406 (464)
T PRK06938 339 GSATLRYIKE--HRLAEHAAAMGERLREHLR--Q-L---QRDYPQ----LGDVRGRGLMLGVEIVDPQGEPDALGHPPAN 406 (464)
T ss_pred HHHHHHHHHH--hHHHHHHHHHHHHHHHHHH--H-H---HHhCCC----eeeeeccceEEEEEeccCcccccccccCCcc
Confidence 6665554322 3445566555555543210 0 0 011110 11236778888888721
Q ss_pred HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhcC
Q 016612 309 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 309 ~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~~ 384 (386)
......+.+.+..+|+.+.+++. ..+.+|+.+ +.++++++++.+.++|+++
T Consensus 407 ~~~~~~~~~~~~~~Gll~~~~g~-------------------------~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~~ 461 (464)
T PRK06938 407 GELASLIQRECLRRGLILELGGR-------------------------HGSVVRFLPPLIITAEQIDEVAEIFAEAVAAA 461 (464)
T ss_pred HHHHHHHHHHHHHCCeEEeecCC-------------------------CCCEEEEECCCccCHHHHHHHHHHHHHHHHHH
Confidence 12345677777777876543221 123478775 4588888888888888753
No 336
>TIGR00508 bioA adenosylmethionine-8-amino-7-oxononanoate transaminase. All members of the seed alignment have been demonstrated experimentally to act as EC 2.6.1.62, an enzyme in the biotin biosynthetic pathway. Alternate names include 7,8-diaminopelargonic acid aminotransferase, DAPA aminotransferase, and adenosylmethionine-8-amino-7-oxononanoate aminotransferase. The gene symbol is bioA in E. coli and BIO3 in S. cerevisiae.
Probab=99.52 E-value=8.6e-13 Score=125.01 Aligned_cols=279 Identities=11% Similarity=0.059 Sum_probs=155.1
Q ss_pred HHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHH----hc----CC-CCEEEecCCCCCcHHHHHhhhccc-------CC
Q 016612 57 RDALESLLAKLDKA--DRALCFTSGMAALAAVTH----LL----GT-GEEIVAGDDLYGGTDRLLSRVTPK-------TG 118 (386)
Q Consensus 57 ~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~----~~----~~-g~~Vlv~~~~~~~~~~~~~~~~~~-------~g 118 (386)
..++.+.+.++++. +...++++|++|+...+. .. .+ ..+|+.-+..|++.......+... ++
T Consensus 90 ~~~la~~l~~~~~~~~~~v~f~~sGseA~e~AlklAr~~~~~~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~ 169 (427)
T TIGR00508 90 AIELCQKLVKMTPNALDCVFLADSGSVAVEVALKMALQYWQAKGEKNRQKFLTIRSGYHGDTFGAMSVCDPENSMHSLYK 169 (427)
T ss_pred HHHHHHHHHhhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhhCCCCccEEEEEcCCcCCccHhhhcccCCccccccccc
Confidence 33444455555433 367788899998763322 11 12 356777777776643221111110 00
Q ss_pred --c-EEEEeCC-----------CCHHHHHhhhC---CCceEEEEeCC-CCCCcccc----cHHHHHHHHHHcCCEEEEeC
Q 016612 119 --V-VVKRVNT-----------CDLDEVASAIG---PWTKLVWVESP-TNPRQQIC----DIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 119 --~-~~~~v~~-----------~d~~~l~~~~~---~~~~~v~~~~~-~nptG~~~----~l~~i~~la~~~~~~li~D~ 176 (386)
. ....++. .|.+++++.+. +++.+|+++.. ++..|... .+++|.++|+++|+++|+||
T Consensus 170 ~~~~~~~~~~~p~~~~~~~~~~~~~~~l~~~l~~~~~~vaavivEPv~~g~gG~~~~~~~~l~~l~~lc~~~~~llI~DE 249 (427)
T TIGR00508 170 GYLPEQIFAPAPQNRFDEEWNEEAITPLAKLMELHSDEIAAVILEPIVQGAGGMRFYHPTYLKRVQALCKQYDILLIADE 249 (427)
T ss_pred ccCCCCeEcCCCCccccchhHHHHHHHHHHHHHhcCCcEEEEEEechhcCcCCcccCCHHHHHHHHHHHHHcCCEEEEec
Confidence 0 0111110 14566666664 46789999986 66555544 48999999999999999999
Q ss_pred CCCC-CCcc-----CCCCCCccEEEeccccccccCCCc-eEEEEEEcChhHHHHHHHhh-----hhcCCCCChhhHHHHH
Q 016612 177 SIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFLQ-----NAEGSGLAPFDCWICL 244 (386)
Q Consensus 177 a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~-~~G~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 244 (386)
++.. |... .......|+++ ++|.++| |+ .++.++++ +++.+.+.... .......++...+++.
T Consensus 250 v~tG~Gr~G~~~~~~~~~v~pDi~~--~gK~l~g--G~~p~~a~~~~-~~~~~~~~~~~~~~~~~~~T~~g~p~~~aaa~ 324 (427)
T TIGR00508 250 IATGFGRTGKLFACEHAGVVPDILC--VGKALTG--GYMTLSATVTT-DKVAQTISSGEAGCFMHGPTFMGNPLACAVAE 324 (427)
T ss_pred cccCCCcCCccchhhhcCCCCCEEE--echhhhc--CcccceEEEEc-HHHHHHHhcCCCCccccCCCCCcCHHHHHHHH
Confidence 9742 2211 11234578776 6999854 43 35666665 55666554211 1112234566666665
Q ss_pred hcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc
Q 016612 245 RGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 322 (386)
Q Consensus 245 ~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 322 (386)
..++.+.. ..++..+..+.+.+.|++.. . .+.+ ...++.|.++.+.+.+......+.+++...
T Consensus 325 a~l~~l~~~~~~~~~~~~~~~l~~~L~~l~---~--~~~i----------~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~ 389 (427)
T TIGR00508 325 ASLAILLEGEWQKQVSAIENQLKRELSPLR---K--NPVV----------KDVRVLGAIGVVEMYKPVNVEELQKKFVEQ 389 (427)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHhh---c--CCCE----------EeEeccccEEEEEECCccCHHHHHHHHHHC
Confidence 55543322 12333334444444444321 0 1111 122567899999886544456777777777
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
|+.+.... ..+|+++. .++++++++.+.++|++
T Consensus 390 Gv~~~~~~----------------------------~~l~~~ppl~~t~~~id~~~~~l~~~l~~ 426 (427)
T TIGR00508 390 GVWIRPFG----------------------------KLIYVMPPYIITTEQLQKLTAALIEALHE 426 (427)
T ss_pred CeEEEecC----------------------------CEEEEECCCCCCHHHHHHHHHHHHHHHhc
Confidence 87653211 23788765 47778888888877753
No 337
>PRK07030 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.52 E-value=5.6e-13 Score=127.23 Aligned_cols=284 Identities=13% Similarity=0.139 Sum_probs=165.6
Q ss_pred CchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHhc---------CCCCEEEecCCCCCcHH-HHHhhhccc-----
Q 016612 54 NPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHLL---------GTGEEIVAGDDLYGGTD-RLLSRVTPK----- 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~~---------~~g~~Vlv~~~~~~~~~-~~~~~~~~~----- 116 (386)
++...++.+.+.++.. .+...+++||++|+.+.+.+. ..+.+|+.-...|++.. ..+ .+...
T Consensus 89 ~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlKlAr~~~~~~g~t~r~~ii~~~~~yHG~t~ga~-s~~~~~~~~~ 167 (466)
T PRK07030 89 HEPVIELSERLVKITPPGLSRCFYADNGSSAIEVALKMSFHYWRNRGKPRKKRFVTLTNSYHGETLAAM-SVGDVALFTE 167 (466)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHHhCCCCCcEEEEECCCcCcccHHHH-hccCCccccc
Confidence 3456667777777653 346778899999986433321 12356777777776642 221 11110
Q ss_pred -CC---cEEEEeCCC-----------------CHHHHHhhhC---CCceEEEEeC-CCCCCccccc----HHHHHHHHHH
Q 016612 117 -TG---VVVKRVNTC-----------------DLDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 117 -~g---~~~~~v~~~-----------------d~~~l~~~~~---~~~~~v~~~~-~~nptG~~~~----l~~i~~la~~ 167 (386)
++ ..+..++.. +++++++.+. +++.+|+++. .....|.+.+ +++|.++|++
T Consensus 168 ~~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~l~~le~~~~~~~~~iAAvi~EP~iqg~gG~~~~~~~yl~~lr~lc~~ 247 (466)
T PRK07030 168 TYKPLLLDTIKVPSPDCYLRPEGMSWEEHSRRMFAHMEQTLAEHHDEIAAVIVEPLIQGAGGMRMYHPVYLKLLREACDR 247 (466)
T ss_pred cCCccCCCCEEcCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEecccccCCCcccCCHHHHHHHHHHHHH
Confidence 00 012222211 2455666664 6789999998 5666677654 8999999999
Q ss_pred cCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHH-------hhhhcCC
Q 016612 168 HGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYF-------LQNAEGS 233 (386)
Q Consensus 168 ~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~-------~~~~~~~ 233 (386)
||+++|+||++. .|-.. ......+|+++. +|.++| | +.+|.++++ +++.+.+.. .......
T Consensus 248 ~g~llI~DEV~TGfGRtG~~~a~~~~gv~PDiv~~--gKgl~g--G~~Pi~av~~~-~ei~~~~~~~~~~~~~~~h~~T~ 322 (466)
T PRK07030 248 YGVHLIHDEIAVGFGRTGTMFACEQAGIRPDFLCL--SKALTG--GYLPLAAVLTT-DTVYQAFYDDYPTLRAFLHSHSY 322 (466)
T ss_pred cCCEEEEeehhhCcCccccchHHHhcCCCCCEEee--ehhccC--CcccceEEEec-HHHHHHHhcccccccccccCCCC
Confidence 999999999975 22221 223446799975 999865 4 357888876 556554421 1112222
Q ss_pred CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-H---
Q 016612 234 GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L--- 309 (386)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~--- 309 (386)
+.++...+++...++.+.. +...++++.+.+++.+.-. .+..++. ..+.++.|.++.+.+.. .
T Consensus 323 ~gnpla~aaa~a~L~~i~~--~~l~~~~~~~G~~l~~~L~-------~l~~~~~----v~~vrG~Gl~~gie~~~~~~~~ 389 (466)
T PRK07030 323 TGNPLACAAALATLDIFEQ--DNVIENNRALARRMAEATA-------HLADHPH----VAEVRQTGMILAIEMVQDKASK 389 (466)
T ss_pred CCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH-------HHhcCCC----EEEeEeceeEEEEEeccCcccc
Confidence 4466666666665554432 3445666666665553210 1111111 11236778888888721 1
Q ss_pred -------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHH
Q 016612 310 -------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLD 378 (386)
Q Consensus 310 -------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~ 378 (386)
....++.+.+..+|+.+... .+.+|+.+ +.++++++++.+.
T Consensus 390 ~~~~~~~~~~~~i~~~~~~~Gvl~~~~----------------------------g~~i~~~Ppl~it~~eid~~~~~l~ 441 (466)
T PRK07030 390 TPYPWQERRGLKVYQHALERGALLRPL----------------------------GSVVYFLPPYVITPEQIDFLAEVAS 441 (466)
T ss_pred ccCcchhHHHHHHHHHHHHCCeEEEec----------------------------CCEEEEECCccCCHHHHHHHHHHHH
Confidence 12346777777777765321 12377764 4588999999999
Q ss_pred HHHhcC
Q 016612 379 KALRTG 384 (386)
Q Consensus 379 ~~l~~~ 384 (386)
++|+++
T Consensus 442 ~al~~~ 447 (466)
T PRK07030 442 EGIDIA 447 (466)
T ss_pred HHHHHH
Confidence 998764
No 338
>PRK05965 hypothetical protein; Provisional
Probab=99.51 E-value=2.3e-12 Score=123.09 Aligned_cols=286 Identities=12% Similarity=0.138 Sum_probs=169.6
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---c----C-C-CCEEEecCCCCCcHHHHHhhhc------cc
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---L----G-T-GEEIVAGDDLYGGTDRLLSRVT------PK 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~----~-~-g~~Vlv~~~~~~~~~~~~~~~~------~~ 116 (386)
++...++.+.|.+++.. +..++++||++|+.+.+.+ . . + ..+|+.-..+|++.......+. ..
T Consensus 89 ~~~~~~lae~L~~~~p~~~~~v~f~~sGSEAve~AlKlAr~~~~~~g~~~r~kii~~~~~YHG~t~~a~s~t~~~~~~~~ 168 (459)
T PRK05965 89 SEPAIRLAAKLAERAPGSLNHVYFTLGGSDAVDSAVRFIRHYWNATGRPSKKQFISLERGYHGSSSVGAGLTALPAFHRG 168 (459)
T ss_pred CHHHHHHHHHHHhhCCCCcCEEEEeCChhHHHHHHHHHHHHHHHhcCCCCccEEEEecCCcCcccHHHHHhcCCchhhcc
Confidence 34556677777777642 3567778999998633321 1 1 2 3568877777766532111111 11
Q ss_pred CCc---EEEEeCC---------CC--------HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHc
Q 016612 117 TGV---VVKRVNT---------CD--------LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 117 ~g~---~~~~v~~---------~d--------~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~ 168 (386)
++. .+..++. .| ++++++.+. +++.+|+++..+...|.+.+ +++|.++|++|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~iAAvIvEPiqg~gG~~~p~~~yl~~lr~lc~~~ 248 (459)
T PRK05965 169 FDLPLPWQHKIPSPYPYRNPVGDDPQAIIAASVAALRAKVAELGADNVAAFFCEPIQGSGGVIVPPKGWLKAMREACREL 248 (459)
T ss_pred cCCCCCCCEEcCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEeccccCCCCccCCHHHHHHHHHHHHHc
Confidence 111 1122221 12 246666664 57899999998887787764 89999999999
Q ss_pred CCEEEEeCCCCC-C---Ccc--CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHH-------hhhhcCCC
Q 016612 169 GALLLVDNSIMS-P---VLS--RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYF-------LQNAEGSG 234 (386)
Q Consensus 169 ~~~li~D~a~~~-~---~~~--~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~-------~~~~~~~~ 234 (386)
|+++|.||++.. | .+. ......+|+++. +|.++| | +.+|.++++ +++.+.+.. .......+
T Consensus 249 gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gKgl~g--G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~ 323 (459)
T PRK05965 249 GILFVADEVITGFGRTGPLFACEAEGVVPDLMTV--AKGLTS--GYVPMGAVLMS-DHVYQGIADGAGAAAPVGHGYTYS 323 (459)
T ss_pred CCEEEEechhccCccCchhhhHhhcCCCCCeEEe--chhhcc--CCcceeEEEEc-HHHHHHHhccccccccccccCCCC
Confidence 999999999752 2 221 122346799975 999865 4 357888876 456554432 11222334
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-H----
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L---- 309 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~---- 309 (386)
.++...++.+..++.+.. +...++++.+.+++.+.-. .+..++. ..+.++.|.++.+.+.. .
T Consensus 324 gnpl~~Aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~l~-------~l~~~~~----v~~vrG~Gl~~gie~~~~~~~~~ 390 (459)
T PRK05965 324 AHPVSAAVGLEVLRLYHE--GGLLANGQKAGPRFAAGLD-------ALRAHPL----VGDVRGRGLLGALELVADKATKT 390 (459)
T ss_pred CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH-------hhccCCC----EEEEeecceEEEEEEeccccccC
Confidence 566666666665554322 3455666666666553210 1111111 12336788888888721 1
Q ss_pred ------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEE----eccCChHHHHHHHHH
Q 016612 310 ------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS----VGIEDVNDLISDLDK 379 (386)
Q Consensus 310 ------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis----~~~~~~~~~i~~l~~ 379 (386)
....++.+.+..+|+.+... +.+.||+. ++.++++++++.+.+
T Consensus 391 ~~~~~~~~~~~i~~~~~~~Gll~~~~---------------------------g~~~i~~~PpL~it~~ei~~~~~~l~~ 443 (459)
T PRK05965 391 PFDAALDPADRIFDRAYANGLVFRAF---------------------------GDGVLGFAPALCCTEGEFDLIFERTRK 443 (459)
T ss_pred CCCchhHHHHHHHHHHHhCCeEEEec---------------------------CCcEEEEECCCcCCHHHHHHHHHHHHH
Confidence 23566777777788765321 13447887 456899999999998
Q ss_pred HHhcC
Q 016612 380 ALRTG 384 (386)
Q Consensus 380 ~l~~~ 384 (386)
+|+++
T Consensus 444 ~l~~~ 448 (459)
T PRK05965 444 TLDDV 448 (459)
T ss_pred HHHHH
Confidence 88653
No 339
>PRK06062 hypothetical protein; Provisional
Probab=99.51 E-value=3.6e-13 Score=128.22 Aligned_cols=283 Identities=16% Similarity=0.171 Sum_probs=164.7
Q ss_pred CCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHHHhhhcc----------cC
Q 016612 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP----------KT 117 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~----------~~ 117 (386)
.++...++.+.|.++... +...+++||++|..+.+.+ .....+|+.-...|++.......... ..
T Consensus 93 ~~~~~~~lae~L~~~~p~~~~~v~f~~SGsEAve~AlklAr~~tgr~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~ 172 (451)
T PRK06062 93 ANDARSEAARLIAERAPGDLSKVFFTNGGADANEHAVRMARLHTGRPKVLSAYRSYHGGTGSAINLTGDPRRWPNDTGRA 172 (451)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEEcCChHHHHHHHHHHHHHhhCCceEEEEeCCCCCCCHHHHhhcCCcccccCCCCCC
Confidence 445667777778777643 4778889999998643332 23346777777667665322111110 01
Q ss_pred CcEEEEeCC---------CC-------HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEE
Q 016612 118 GVVVKRVNT---------CD-------LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLL 173 (386)
Q Consensus 118 g~~~~~v~~---------~d-------~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li 173 (386)
|+.....+. .| ++++++.+. +++.+|+++......|.+.| +++|.++|++||+++|
T Consensus 173 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~l~~~~~~~iAaviiEPv~g~gG~~~p~~~yl~~lr~lc~~~g~lLI 252 (451)
T PRK06062 173 GVVHFFGPFLYRSEFHATTEEEECERALAHLERVIELEGPSTIAAILLESVPGTAGILVPPPGYLAGVRELCDRHGIVLI 252 (451)
T ss_pred CCEEeCCCCccccccCCCChHHHHHHHHHHHHHHHHhcCCCceEEEEEccccCCCCcccCCHHHHHHHHHHHHHcCCEEE
Confidence 111111111 12 566777663 46789999998888888877 9999999999999999
Q ss_pred EeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCc-eEEEEEEcChhHHHHHHHh--hhhcCCCCChhhHHHHH
Q 016612 174 VDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDV-MAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCWICL 244 (386)
Q Consensus 174 ~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~-~~G~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 244 (386)
+||+++. |-.. ......+|+++ ++|.+++ |. .+|.+++++ ++.+.+... ......+.++...++++
T Consensus 253 ~DEV~tGfGRtG~~~a~~~~gv~PDi~t--~gK~lgg--G~~Pigav~~~~-~i~~~~~~~~~~~~~T~~gnpl~~Aaa~ 327 (451)
T PRK06062 253 ADEVMAGFGRTGKWFAIEHFGVVPDLIT--FAKGVNS--GYVPLGGVAISE-AIAATFADRPYPGGLTYSGHPLACAAAV 327 (451)
T ss_pred eeccccCCCcCcHHHHHHhcCCCCCeee--echhhhc--CCcCcEEEEEcH-HHHHHhccCCCCCCCCCCCCHHHHHHHH
Confidence 9999862 2111 12234578775 6999975 32 356666664 566554321 11122344566666666
Q ss_pred hcCCcHHHHHHHHHHHHHHHH-----HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-H---------
Q 016612 245 RGVKTMALRVEKQQDNAQKIA-----EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L--------- 309 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~-----~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~--------- 309 (386)
..++.+.. +...++++.+. +.|++... ..+.+ .+.++.|.++.+.+.. .
T Consensus 328 a~L~~l~~--~~l~~~~~~~G~~~l~~~L~~l~~----~~~~v----------~~vrG~Gl~~gve~~~~~~~~~~~~~~ 391 (451)
T PRK06062 328 ATINAMEE--EGIVENAARIGAEVLGPGLRELAE----RHPSV----------GEVRGLGVFWALELVADRETREPLAPY 391 (451)
T ss_pred HHHHHHHh--cCHHHHHHHHHHHHHHHHHHHHHh----cCCcE----------EeEeccccEEEEEEcccccccCCCccc
Confidence 66654422 22444444443 23332110 00111 1225667777777621 1
Q ss_pred ----HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHH
Q 016612 310 ----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKAL 381 (386)
Q Consensus 310 ----~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l 381 (386)
....++.+.+...|+..... .+.+|+++. .++++++++.+.++|
T Consensus 392 ~~~~~~~~~~~~~l~~~Gvl~~~~----------------------------~~~lrl~ppl~~t~~eid~~~~~l~~~l 443 (451)
T PRK06062 392 GASSAAMAAVKAACKERGLLPFVN----------------------------GNRIHVVPPCTVTEDEVREGLAILDAAL 443 (451)
T ss_pred chhhHHHHHHHHHHHHCCcEEeec----------------------------CCEEEEECCccCCHHHHHHHHHHHHHHH
Confidence 13556777777777753211 234888763 488888888888888
Q ss_pred hcC
Q 016612 382 RTG 384 (386)
Q Consensus 382 ~~~ 384 (386)
+++
T Consensus 444 ~~~ 446 (451)
T PRK06062 444 AVA 446 (451)
T ss_pred HHh
Confidence 764
No 340
>PRK06105 aminotransferase; Provisional
Probab=99.51 E-value=3.8e-12 Score=121.55 Aligned_cols=285 Identities=14% Similarity=0.138 Sum_probs=167.2
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHhc-------C-C-CCEEEecCCCCCcHHHHHhhhcc------c
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLL-------G-T-GEEIVAGDDLYGGTDRLLSRVTP------K 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~~-------~-~-g~~Vlv~~~~~~~~~~~~~~~~~------~ 116 (386)
++...++.+.|.+++.. +...+++||++|+.+.+.+. . + ..+|+.-+..|++.......+.. .
T Consensus 91 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlKlar~~~~~~g~t~r~~il~~~~~yHG~t~~a~s~t~~~~~~~~ 170 (460)
T PRK06105 91 HGPVIDLAEKLVAMAPVPMSKVFFTNSGSEANDTVVKLVWYYNNALGRPEKKKIISRQRGYHGVTIASASLTGLPNNHRS 170 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEecCccCCcchhheeccCCcccccc
Confidence 35566788888887743 36777899999986443331 1 2 35677666666554211111110 1
Q ss_pred CC---cEEEEeCCC------------------CHHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHH
Q 016612 117 TG---VVVKRVNTC------------------DLDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 117 ~g---~~~~~v~~~------------------d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 167 (386)
++ ..+..++.. ..+++++.+. +++.+|+++......|.+.+ +++|.++|++
T Consensus 171 ~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~le~~~~~~~~~~iAavIvEPiqg~gG~~~~~~~yl~~lr~lc~~ 250 (460)
T PRK06105 171 FDLPLDRILHTGCPHYYRFGLPGESEEAFATRLANELEALILAEGPDTIAAFIGEPVMGAGGVIVPPKTYWEKIQAVLRK 250 (460)
T ss_pred cCCCCCCCEEcCCCcccccccCCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 11 112222221 1355666662 46889999998887788776 9999999999
Q ss_pred cCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh-------hhhcCCC
Q 016612 168 HGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSG 234 (386)
Q Consensus 168 ~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-------~~~~~~~ 234 (386)
||+++|+||++. .|... ......+|+++ ++|.++|. .+.+|.++++ +++.+.+... ......+
T Consensus 251 ~~~llI~DEv~tG~GRtG~~f~~~~~~v~PDi~~--~gK~lggG-~~P~~av~~~-~~i~~~~~~~~~~~~~~~h~~T~~ 326 (460)
T PRK06105 251 YDILLVADEVICGFGRTGNMFGCETFGIKPDILV--MSKQLSSS-YQPLSAVLMN-EKVYDPIADESGKIGTFGHGFTAS 326 (460)
T ss_pred cCCeEEEeccccCCCcCchhhhHHhcCCCCCeee--eecccccC-cccceEEEEc-HHHHHHHhcccccCcccccCCCCC
Confidence 999999999984 33322 12234578885 59999652 1346788776 4565544321 1122335
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC------
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS------ 308 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------ 308 (386)
.++...++++..++.+.. +...++.+.+.+++.+.-. .+..++. ..+.++.|.++.+.+..
T Consensus 327 gnpl~~aaa~a~L~~i~~--~~l~~~v~~~g~~l~~~L~-------~l~~~~~----v~~vrG~Gl~~gie~~~~~~~~~ 393 (460)
T PRK06105 327 GHPVAAAVALENLAIIEE--RDLVGNAAERGARLQARLR-------ALADHPL----VGEVRGVGLIAAVELVADKATKT 393 (460)
T ss_pred CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH-------HhhcCCC----eEEEEecceEEEEEEecCcccCC
Confidence 666666666666654432 2344555555555543210 0111111 11236778888887721
Q ss_pred -----HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHH
Q 016612 309 -----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDK 379 (386)
Q Consensus 309 -----~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~ 379 (386)
......+.+.+...|+.+.+. .+.+|+++ +.++++++++.+.+
T Consensus 394 ~~~~~~~~a~~i~~~~~~~Gvl~~~~----------------------------g~~i~l~Ppl~it~~eid~~~~~l~~ 445 (460)
T PRK06105 394 PFEPPGKVGARANAAAHEHGVISRAM----------------------------GDTLAFCPPLIITAAQVDEMVDRFGR 445 (460)
T ss_pred CCCchhHHHHHHHHHHHHCCeEEEec----------------------------CCEEEEECCCccCHHHHHHHHHHHHH
Confidence 112356777777777765431 12378775 45888999999988
Q ss_pred HHhc
Q 016612 380 ALRT 383 (386)
Q Consensus 380 ~l~~ 383 (386)
+|++
T Consensus 446 ~l~~ 449 (460)
T PRK06105 446 ALDD 449 (460)
T ss_pred HHHH
Confidence 8865
No 341
>KOG1402 consensus Ornithine aminotransferase [Amino acid transport and metabolism]
Probab=99.51 E-value=1.8e-12 Score=111.89 Aligned_cols=284 Identities=18% Similarity=0.231 Sum_probs=177.6
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhc-------C--C-CC-EEEecCCC-CCcHHHHHh-----hhcccCC
Q 016612 56 TRDALESLLAKLDKADRALCFTSGMAALAAVTHLL-------G--T-GE-EIVAGDDL-YGGTDRLLS-----RVTPKTG 118 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~-------~--~-g~-~Vlv~~~~-~~~~~~~~~-----~~~~~~g 118 (386)
...+.++.+.+++|.+..+..++|.+|...+..+. + | .. .++..... |+-+..++- ..-+.+|
T Consensus 102 ~~~~f~~~vt~lf~~~kvlpmnTGaEa~Eta~KLaR~wgy~~K~ip~nka~il~~~~nFhGrT~~ais~s~d~ds~~~fg 181 (427)
T KOG1402|consen 102 VLGEFAEYVTKLFGYDKVLPMNTGAEAVETACKLARKWGYRKKNIPKNKAKILSAENNFHGRTLGAISLSTDPDSWDGFG 181 (427)
T ss_pred hHHHHHHHHHHhcCcceeeecccchhHHHHHHHHHHHHHHhhccCCccceeEEEecccccCceeeeEEecCCcchhhccC
Confidence 44567777888889999999999998886332221 1 3 22 33333333 332221100 0011122
Q ss_pred ----cEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC----CCcc-
Q 016612 119 ----VVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS----PVLS- 184 (386)
Q Consensus 119 ----~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~----~~~~- 184 (386)
..+..++..|.++|+..++ ++.++++++..+-..|.+.| ++++.++|.+|++++|.||+|.. |.+.
T Consensus 182 p~~P~~~~~v~Y~d~eale~~l~~~~vaaFivEPIQGEaGVvvP~~GYL~~vreLCtkynvl~I~DEvQTGl~RTGk~la 261 (427)
T KOG1402|consen 182 PFLPGVVDKVPYGDAEALEVALKSPNVAAFIVEPIQGEAGVVVPPPGYLKKVRELCTKYNVLLIADEVQTGLARTGKLLA 261 (427)
T ss_pred CCCCCcceeeccCCHHHHHHHhcCCCeeEEEeeccccccceEeCCchhHHHHHHHHHhhcEEEEehhhhhcccccCcEEE
Confidence 1255667779999999987 68899999999999999975 99999999999999999999863 2222
Q ss_pred -CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHH
Q 016612 185 -RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQK 263 (386)
Q Consensus 185 -~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (386)
+......|+++. .|.++|.- +....+.++ ++++..+........-+-++..++...++++.+.+ +.+.+++..
T Consensus 262 ~d~env~PDivil--gKalSGG~-~Pvsavl~~-~~im~~~~pgeHgsTyggNpLg~~vaiAalevi~e--ekL~era~~ 335 (427)
T KOG1402|consen 262 CDYENVRPDIVIL--GKALSGGV-YPVSAVLAD-DDIMLNIKPGEHGSTYGGNPLGCAVAIAALEVIVE--EKLVERAAK 335 (427)
T ss_pred eehhhcCCCeEEE--eccccCCe-eeeEEEEec-HHHHhccCCCccccccCCChHHHHHHHHHHHHHHH--HHHHHHHHH
Confidence 223345788874 89887622 234445544 56665555555555556677777777676664433 566677776
Q ss_pred HHHHHhhCCCcceEecCCC-CCCCchhhhhhccCCCCceEEEEeC----CHHhHHHHHhhcCcceeccCCCCcccccccc
Q 016612 264 IAEFLASHPRVKKVNYAGL-PEHPGHELHYSQAKGAGSVLSFLTG----SLALSKHVVETTKYFSITVSFGSVKSLISMP 338 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l-~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p 338 (386)
+...+...-. .| ...|+ +.+.-+++|-+..+.+. +...+..++-.++++|+...+-+
T Consensus 336 lG~~l~~~L~-------~l~~~~p~---~v~~VRGrGl~~ai~i~~~~~~~~~aw~~cl~lk~~g~LAkptH-------- 397 (427)
T KOG1402|consen 336 LGEILRDQLN-------KLQKKFPH---VVKEVRGRGLLNAIVINPSKTSGQDAWDVCLALKENGLLAKPTH-------- 397 (427)
T ss_pred HHHHHHHHHH-------hccccccc---hhheeeccceEEEEEeccccccchhHHHHHHcccccccccCCCC--------
Confidence 6665543210 01 11111 11233677878887763 34567788888888887543311
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHh
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALR 382 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~ 382 (386)
.+.||+... .++.++-++.++.++.
T Consensus 398 -------------------~~IiRfaPPL~I~e~dl~eg~e~i~k~i~ 426 (427)
T KOG1402|consen 398 -------------------GNIIRFAPPLVISEEDLREGIEAIEKTIA 426 (427)
T ss_pred -------------------CCeEEecCCcccCHHHHHHHHHHHHHHhc
Confidence 234888764 4777777777776653
No 342
>PRK08742 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.51 E-value=6.6e-13 Score=126.70 Aligned_cols=285 Identities=14% Similarity=0.113 Sum_probs=164.5
Q ss_pred CchHHHHHHHHHhhcCC-------CceEEeCcHHHHHHHHHHh---c------CCCCEEEecCCCCCcHHHHHhhhccc-
Q 016612 54 NPTRDALESLLAKLDKA-------DRALCFTSGMAALAAVTHL---L------GTGEEIVAGDDLYGGTDRLLSRVTPK- 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~-------~~~i~~~~gt~al~~~~~~---~------~~g~~Vlv~~~~~~~~~~~~~~~~~~- 116 (386)
++...++.+.+.+.+.. +...+++||++|+.+.+.+ . ....+|+.-...|++...........
T Consensus 106 ~~~~~~lae~L~~~~p~~~~~~~~~~v~f~~sGSEAvE~AlKlAr~~~~~~g~~~r~~ii~~~~syHG~t~gals~~~~~ 185 (472)
T PRK08742 106 HEPAVQLAEQLLAIAPRQDGRAPLSKVFYADNGSAGVEVALKMAFHYFHNRGEHRRTRFIALENGYHGETIGALAVGDIP 185 (472)
T ss_pred CHHHHHHHHHHHHhCCCcccCCCCCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCCchhhhhccCCc
Confidence 34566677777776532 3677889999998643322 1 11357887777776653211111100
Q ss_pred -----CC---cEEEEeCCC-----------------CHHHHHhhhC---CCceEEEEeC-CCCCCccccc----HHHHHH
Q 016612 117 -----TG---VVVKRVNTC-----------------DLDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAE 163 (386)
Q Consensus 117 -----~g---~~~~~v~~~-----------------d~~~l~~~~~---~~~~~v~~~~-~~nptG~~~~----l~~i~~ 163 (386)
++ ..+..++.. +++.+++.+. +++.+|+++. .....|.+.+ ++++.+
T Consensus 186 ~~~~~~~p~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~iAAvI~EPviqg~gG~~~~p~~fl~~lr~ 265 (472)
T PRK08742 186 LYRRVYAPLLLESLFAPSPDAYLAEPGQSAEDYALQAADALQALFEQSPGEICALILEPRLQCAGGMRMHHPAYLRRARE 265 (472)
T ss_pred ccccccCCCCCCCEEeCCCCccccccCCCHHHHHHHHHHHHHHHHHhCCCceEEEEEccccccCCCcccCCHHHHHHHHH
Confidence 00 012222221 2455666653 5788999998 5666677653 899999
Q ss_pred HHHHcCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHh------hhh
Q 016612 164 MAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL------QNA 230 (386)
Q Consensus 164 la~~~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~------~~~ 230 (386)
+|++||+++|.||++. .|-.. ......+|+++. +|.++| | +.+|.++++ +++.+.+... ...
T Consensus 266 lc~~~gillI~DEV~TGfGRtG~~~a~e~~gv~PDiv~~--gKgl~g--G~~Plaav~~~-~ei~~~~~~~~~~~~~~h~ 340 (472)
T PRK08742 266 LCDAHGAFLIADEIATGFGRTGTLFACEQAGVMPDLLCL--SKGLTG--GFLPLSAVLAT-QQLYDAFLDDSRERAFLHS 340 (472)
T ss_pred HHHHcCCEEEEechhhCCCCCccchHHHhcCCCCCEEEE--cccccC--CCCCcceeecc-HHHHHHhhccCccCccCcC
Confidence 9999999999999975 22221 122346799875 999965 3 236777776 5565544211 111
Q ss_pred cCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-H
Q 016612 231 EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-L 309 (386)
Q Consensus 231 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 309 (386)
...+.++...++....++.+.. +...++++.+.+++++... .+..++. ..+.++.|.++.+.+.. .
T Consensus 341 ~T~~gnpl~~Aaa~a~L~~i~~--~~l~~~~~~~g~~l~~~~~-------~~~~~~~----i~dvRG~Gl~~giel~~~~ 407 (472)
T PRK08742 341 HSYTGNPLACAAALATLDIFAD--DDVIARNQPTAARMTQLAA-------QIGEHPH----VADVRQAGMVVAFELTRGG 407 (472)
T ss_pred CCCCccHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHH-------HHhcCCC----eeeEeccceEEEEEeccCc
Confidence 2223456666666655553322 3445566666665553211 1111111 12236788899988721 1
Q ss_pred ----------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHH
Q 016612 310 ----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLIS 375 (386)
Q Consensus 310 ----------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~ 375 (386)
....++.+.+..+|+.+... .+.||+.+. .++++++++
T Consensus 408 ~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------g~vi~~~PpL~it~~ei~~~~~ 459 (472)
T PRK08742 408 NKRTPFPPAARVGLHAYRAALARGVVLRPL----------------------------GDVLYWMPPYCVDEAQLALLAD 459 (472)
T ss_pred cccccCCchhHHHHHHHHHHHHCCeEEEec----------------------------CCEEEEECCCCCCHHHHHHHHH
Confidence 12345667777777765321 123777764 588999999
Q ss_pred HHHHHHhcC
Q 016612 376 DLDKALRTG 384 (386)
Q Consensus 376 ~l~~~l~~~ 384 (386)
.|.++|+++
T Consensus 460 ~l~~~l~~~ 468 (472)
T PRK08742 460 TTRHAIDEA 468 (472)
T ss_pred HHHHHHHHH
Confidence 999998764
No 343
>PRK12389 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.50 E-value=5.2e-12 Score=119.91 Aligned_cols=285 Identities=15% Similarity=0.148 Sum_probs=162.4
Q ss_pred chHHHHHHHHHhhcC-CCceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHHHhhhcc----------cCC--
Q 016612 55 PTRDALESLLAKLDK-ADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTP----------KTG-- 118 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g-~~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~----------~~g-- 118 (386)
+...++.+.+.+... .+...+++||++|+.+.+.+ .....+|+.-...|++.......... ..+
T Consensus 93 ~~~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~~~~~ 172 (428)
T PRK12389 93 ELEIEFAKMLKEAIPSLEKVRFVNSGTEAVMTTIRVARAYTGRTKIIKFAGCYHGHSDLVLVAAGSGPSTLGTPDSAGVP 172 (428)
T ss_pred HHHHHHHHHHHHhCCCCcEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCChHHHHHhcCCcccccCCCCCCCCC
Confidence 344555555555543 45778889999998644332 33346777767667664322111110 011
Q ss_pred ----cEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCC---Cc-
Q 016612 119 ----VVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP---VL- 183 (386)
Q Consensus 119 ----~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~---~~- 183 (386)
..+..++..|++.+++.+. +++.+|+++......|.+.| +++|.++|+++|+++|+||++... ..
T Consensus 173 ~~~~~~~~~~~~~d~~~l~~~l~~~~~~vaavi~EPv~g~~G~~~p~~~yl~~l~~lc~~~g~llI~DEV~tG~Rt~~~~ 252 (428)
T PRK12389 173 KSIAQEVITVPFNDIEALKEALDKWGDEVAAVLVEPIVGNFGIVEPKPGFLEAVNELAHEAGALVIYDEVITAFRFMYGG 252 (428)
T ss_pred CcccCceEEcCCCCHHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccccccccCcch
Confidence 1344556668899988874 56889999999888888887 999999999999999999998632 11
Q ss_pred -cCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh---hhhcCCCCChhhHHHHHhcCCcHHH--HHHHH
Q 016612 184 -SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQ 257 (386)
Q Consensus 184 -~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 257 (386)
.......+|++ +++|.+++ |+.+|.++++ +++.+.+... ......+.++...++.+..++.+.. ..++.
T Consensus 253 a~~~~gv~PDiv--t~gK~lgg--G~Pi~av~~~-~~i~~~~~~~~~~~~~~T~~gnpl~~Aaala~L~~l~~~~l~~~~ 327 (428)
T PRK12389 253 AQDLLGVEPDLT--ALGKIIGG--GLPIGAYGGR-KDIMEQVAPLGPAYQAGTMAGNPASMAAGIACLEVLQQEGVYEKL 327 (428)
T ss_pred hhHHhCCCCCee--eechhhcC--CCceeEEeEH-HHHHhhhccCCCcccccCCccCHHHHHHHHHHHHHHhcccHHHHH
Confidence 11123457886 56999965 4557777776 5566654321 1112235566666666665554322 12223
Q ss_pred HHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------------CHHhHHHHHhhcCccee
Q 016612 258 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYFSI 324 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~~gi 324 (386)
.+..+.+.+.|++.. ..++. .....++ ++++.+.+. +......+.+.+..+|+
T Consensus 328 ~~~g~~l~~~L~~l~----------~~~~~---~~~v~r~-~g~~gi~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv 393 (428)
T PRK12389 328 DRLGAMLEEGILEAA----------EKHGI---TITINRL-KGALTVYFTDEKVTNYDQAERSDGEAFGKFFKLMLNQGI 393 (428)
T ss_pred HHHHHHHHHHHHHHH----------HhCCC---CEEEEec-CcEEEEEEeCCCCCChhhhcccCHHHHHHHHHHHHHCCc
Confidence 333333333333210 00000 0000022 235555542 11235677777777787
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.+.+..... + .+.+.++.++++++++.+.++|++
T Consensus 394 ~~~~~~~~~-~------------------------~~~l~~t~e~id~~~~~l~~~l~~ 427 (428)
T PRK12389 394 NLAPSKYEA-W------------------------FLTTAHTEEDIEETLEAVDRAFAQ 427 (428)
T ss_pred EeecCCCCC-e------------------------eecCCCCHHHHHHHHHHHHHHHHh
Confidence 654421100 0 022334568899999999999875
No 344
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=99.50 E-value=1.1e-12 Score=121.70 Aligned_cols=212 Identities=20% Similarity=0.245 Sum_probs=140.5
Q ss_pred hHHHHHHHHHhhcCCC---------ceEEeCcHHHHH-HHHHHh----c----CCC------CEEEecCCCCCcHHHHHh
Q 016612 56 TRDALESLLAKLDKAD---------RALCFTSGMAAL-AAVTHL----L----GTG------EEIVAGDDLYGGTDRLLS 111 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---------~~i~~~~gt~al-~~~~~~----~----~~g------~~Vlv~~~~~~~~~~~~~ 111 (386)
+-.++.+++++++|.+ ..+++++||+++ .++.+. . ..| -.|++++..|.+..
T Consensus 80 ~E~~vi~~l~~l~g~~~~~~~~~~~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~aH~S~~---- 155 (373)
T PF00282_consen 80 IEREVIRWLADLFGLPESFTFSKDAGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQAHYSIE---- 155 (373)
T ss_dssp HHHHHHHHHHHHTTGSGGTTSTTTSEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS-THHH----
T ss_pred chHHHHHHHHHHhCCcccccccCCCceeEeccchHHHHHHHHHHHHHHhhhhhhcccccccccccccccccccHHH----
Confidence 4556677888888876 378889999775 444332 1 112 25678888898885
Q ss_pred hhcccCCcEEEEeCCC-----CHHHHHhhhCC---C---ceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCC
Q 016612 112 RVTPKTGVVVKRVNTC-----DLDEVASAIGP---W---TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~~-----d~~~l~~~~~~---~---~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~ 180 (386)
+.+...|+.++.|+.+ |+++|++.+.. + +-+|+.+..+..+|.+.|+++|.++|+++++++++|++++.
T Consensus 156 Kaa~~lGlg~~~I~~~~~~~md~~~L~~~l~~~~~~g~~p~~vvat~Gtt~~Ga~D~l~~i~~i~~~~~~wlHVDaA~gg 235 (373)
T PF00282_consen 156 KAARILGLGVRKIPTDEDGRMDIEALEKALEKDIANGKTPFAVVATAGTTNTGAIDPLEEIADICEKYNIWLHVDAAYGG 235 (373)
T ss_dssp HHHHHTTSEEEEE-BBTTSSB-HHHHHHHHHHHHHTTEEEEEEEEEBS-TTTSBB-SHHHHHHHHHHCT-EEEEEETTGG
T ss_pred HhcceeeeEEEEecCCcchhhhHHHhhhhhcccccccccceeeeccCCCcccccccCHHHHhhhccccceeeeecccccc
Confidence 6677888888888865 78888887751 2 33677788899999999999999999999999999999986
Q ss_pred CCccCC----CC---CCccEEEeccccccccCCCceEEEEEEcChhHHHH-H----HHhhhh----------------cC
Q 016612 181 PVLSRP----LE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-L----YFLQNA----------------EG 232 (386)
Q Consensus 181 ~~~~~~----~~---~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~-~----~~~~~~----------------~~ 232 (386)
..+..+ .. ..+|-++.++|||++.|.+ +|+++.+++..... + ..+... .+
T Consensus 236 ~~~~~~~~~~~~~gi~~adSit~d~HK~l~~P~~--~~~~l~r~~~~l~~~~~~~~~Yl~~~~~~~~~~~~~~~~tl~~S 313 (373)
T PF00282_consen 236 SALLSPEYRHLLFGIERADSITIDPHKWLGVPYG--CGVLLVRDKSDLRDAFSINADYLGNDDRESDESYDYGDYTLQGS 313 (373)
T ss_dssp GGGGHCTTGGGGTTGGGESEEEEETTTTTS-SSS---EEEEESSGGGHHGGGEEEETCTT-S-SSS-GGGCEEEGSSSSS
T ss_pred cccccccccccccccccccccccchhhhhcCCcc--ceeEEeecccchHHHhccChhhhccccccccccccccccccccc
Confidence 443211 11 2579999999999988776 89999988754331 1 111100 00
Q ss_pred CCCChhhHHHHH--hcCCcHHHHHHHHHHHHHHHHHHHhhCCC
Q 016612 233 SGLAPFDCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 233 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
........|+.+ .+.+.+..++++..+.++.+.+.+++.+.
T Consensus 314 R~~~alk~w~~l~~~G~~G~~~~i~~~~~~a~~l~~~l~~~~~ 356 (373)
T PF00282_consen 314 RRFRALKLWATLKSLGREGYRERIRRCIELARYLADRLRKDPR 356 (373)
T ss_dssp GHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTT
T ss_pred ccchHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 011123334443 34556778888888999999999998874
No 345
>PLN02482 glutamate-1-semialdehyde 2,1-aminomutase
Probab=99.49 E-value=1.6e-12 Score=123.85 Aligned_cols=284 Identities=15% Similarity=0.147 Sum_probs=160.2
Q ss_pred chHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHH-Hhhh---------cccCCc-
Q 016612 55 PTRDALESLLAKLD-KADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRL-LSRV---------TPKTGV- 119 (386)
Q Consensus 55 ~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~-~~~~---------~~~~g~- 119 (386)
+...++.+.+.+.. +.+...+++||++|....+.+ ....++|+.-...|++.... +... ....|.
T Consensus 139 ~~~~~lAe~l~~~~p~~~~v~f~~SGsEA~e~AlklAR~~tgr~~Ii~~~g~YHG~~~~~~~~~~~~~~~~~~~~~~g~~ 218 (474)
T PLN02482 139 LLENVLAEMVIDAVPSVEMVRFVNSGTEACMGVLRLARAYTGREKIIKFEGCYHGHADSFLVKAGSGVATLGLPDSPGVP 218 (474)
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhcCCCEEEEECCccCCCcchhhhhcCCCccccCCCCCCCCC
Confidence 44556666676665 345788889999998643332 33446788777777775311 1000 001111
Q ss_pred -----EEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 120 -----VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 120 -----~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
.+..++..|++++++.+. +++.+|+++......|.+.| +++|.++|++||+++|+||++. |...
T Consensus 219 ~~~~~~~~~~~~nd~~~l~~~l~~~~~~iAavI~Epv~g~~G~i~p~~~fl~~lr~lc~~~g~lLI~DEV~t-GfR~g~~ 297 (474)
T PLN02482 219 KAATSATLTAPYNDLEAVKKLFEANKGEIAAVILEPVVGNSGFIVPKKEFLEGLREITKENGALLVFDEVMT-GFRIAYG 297 (474)
T ss_pred CCCCCCeEEecCCChHHHHHHHHhCCCceEEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEecccc-CeecCcc
Confidence 234455668899988875 46889999988888888875 7799999999999999999984 3211
Q ss_pred ---CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---hhcCCCCChhhHHHHHhcCCcHH--HHHHH
Q 016612 185 ---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMA--LRVEK 256 (386)
Q Consensus 185 ---~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 256 (386)
......+|++ +++|.++| |+-+|.++++ +++.+.+.... .....+.++....+.+..++.+. ...++
T Consensus 298 ga~~~~gv~PDi~--t~gK~lgg--G~Pigav~g~-~ei~~~~~~~~~~~~~~T~~gnpl~~aAala~L~~l~~~~~~~~ 372 (474)
T PLN02482 298 GAQEYFGITPDLT--TLGKVIGG--GLPVGAYGGR-REIMEMVAPAGPMYQAGTLSGNPLAMTAGIHTLKRLQQPGTYEY 372 (474)
T ss_pred hHhHHhCCCCCEE--EecchhhC--CCceEEEEEc-HHHHHhhccCCCcccccCcchhHHHHHHHHHHHHHHhccCHHHH
Confidence 1122356876 46999964 4557777775 56666553211 11112234555555544444332 12233
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------------CHHhHHHHHhhcCcce
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYFS 323 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~~g 323 (386)
..+..+.+.+.|++... +. +++.. . ...++++.+.+. +......+.+.+..+|
T Consensus 373 ~~~~g~~l~~~L~~l~~--~~---g~~~~------~---~~v~g~~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~l~~~G 438 (474)
T PLN02482 373 LDKITKKLIQGILEAGK--KA---GHEMC------G---GYISGMFGFFFTEGPVYNFADAKKSDTAKFARFHRGMLEEG 438 (474)
T ss_pred HHHHHHHHHHHHHHHHH--hc---CCCEE------E---cccceEEEEEEecCCccChhhhccCCHHHHHHHHHHHHHCC
Confidence 33444444444443210 00 00000 0 011234544431 2223456777777788
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
+.+.+... + .+++.+..+.+++++.++.+.+++++
T Consensus 439 v~~~~~~~------~-------------------~~~psl~ht~~dId~~l~al~~~l~~ 473 (474)
T PLN02482 439 VYLAPSQF------E-------------------AGFTSLAHTEEDIDFTIAAAERVLAR 473 (474)
T ss_pred eEEeccCC------C-------------------CCcCCCCCCHHHHHHHHHHHHHHHHh
Confidence 86543211 0 01122344568899999999988865
No 346
>PRK06082 4-aminobutyrate aminotransferase; Provisional
Probab=99.47 E-value=4.4e-12 Score=121.03 Aligned_cols=287 Identities=16% Similarity=0.193 Sum_probs=162.1
Q ss_pred CCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcH-HHHHhhhccc------CC--
Q 016612 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGT-DRLLSRVTPK------TG-- 118 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~-~~~~~~~~~~------~g-- 118 (386)
.++...++.+.|+++++. +...+++||++|+.+++.+ .....+|+.-...|++. ...+ .+... ++
T Consensus 111 ~~~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~tgr~~ii~~~~~yHG~t~~a~-s~~~~~~~~~~~~~~ 189 (459)
T PRK06082 111 TNETAIECAEKLTEIAGGELNRVLFAPGGTSAIGMALKLARHITGNFKVVSLWDSFHGASLDAI-SVGGEACFRQGMGPL 189 (459)
T ss_pred CCHHHHHHHHHHHHhCCCCCCEEEECCCcHHHHHHHHHHHHHhcCCCEEEEEeCCCcCccHHHH-hhcCCcccccCCCCC
Confidence 445677888888888753 3677788999998754443 23346677666666554 2222 11100 00
Q ss_pred -cEEEEeCC--------CC--------HHHHHhhhC--CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeC
Q 016612 119 -VVVKRVNT--------CD--------LDEVASAIG--PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 119 -~~~~~v~~--------~d--------~~~l~~~~~--~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~ 176 (386)
..+..++. .+ ++++++.+. +++.+|+++...+..+.+.| +++|.++|++||+++|+||
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~vAavIvEPv~g~g~~~~~~~yl~~lr~lc~~~g~llI~DE 269 (459)
T PRK06082 190 MAGVERIPPAVSYRGAFPDADGSDVHYADYLEYVIEKEGGIGAFIAEAVRNTDVQVPSKAYWKRVREICDKHNVLLIIDE 269 (459)
T ss_pred CCCCEEeCCCcccccccCChhHHHHHHHHHHHHHHhcCCCEEEEEECCccCCCCcCCCHHHHHHHHHHHHHcCCEEEEec
Confidence 01122221 11 245676664 46889999988876333345 8999999999999999999
Q ss_pred CCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH
Q 016612 177 SIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM 250 (386)
Q Consensus 177 a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (386)
+++. |-.. ......+|+++ ++|.+++ +.+-+|.+++++ ++.............+.++...++++..++.+
T Consensus 270 V~tG~GRtG~~fa~e~~gv~PDiv~--~gKgl~g-G~~P~~av~~~~-~i~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l 345 (459)
T PRK06082 270 IPNGMGRTGEWFTHQAYGIEPDILC--IGKGLGG-GLVPIAAMITKD-KYNTAAQISLGHYTHEKSPLGCAAALATIEVI 345 (459)
T ss_pred hhhCCCccchhhHhHhhCCCCCEEE--ecccccC-CCCcceEEEEcH-HHHhhccCCCCCCCCCcCHHHHHHHHHHHHHH
Confidence 9762 2221 11234578886 6999965 213467777764 45432211001123345666666666655544
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--------HHhHHHHHhhcCcc
Q 016612 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LALSKHVVETTKYF 322 (386)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~l~~~ 322 (386)
.. +...++++.+.+++.+.-. . + ...++. ..+.++.|.++.+.+.. ......+...+..+
T Consensus 346 ~~--~~l~~~~~~~g~~l~~~L~--~-l---~~~~~~----i~~vrG~Gl~~~ve~~~~~~~~~~~~~~~~~~~~~~~~~ 413 (459)
T PRK06082 346 EQ--EGLLEKVKADSQFMRERLL--E-M---KAKYPL----IGDVRGIGLLWGVELVTDRHTKERAYDEAEAVLYRCLNN 413 (459)
T ss_pred Hh--cCHHHHHHHHHHHHHHHHH--H-H---HhhCCC----eeeeeeccceeEEEEccCccccCccHHHHHHHHHHHHhC
Confidence 22 2334444444444433210 0 0 001110 11236778888888731 12245666666677
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~ 383 (386)
|+..... ..+.+|+++ +.+++++.++.++++|++
T Consensus 414 Gvl~~~~---------------------------~~~~i~~~Ppl~it~~eid~~~~~l~~~l~~ 451 (459)
T PRK06082 414 GLSFKVS---------------------------QGNVIQLSPPLIITREELTQALAILEEAIAK 451 (459)
T ss_pred CCEEEec---------------------------CCCEEEEeCCCccCHHHHHHHHHHHHHHHHH
Confidence 7754321 124488875 458888888888888865
No 347
>PRK06916 adenosylmethionine--8-amino-7-oxononanoate transaminase; Provisional
Probab=99.47 E-value=2.9e-12 Score=122.44 Aligned_cols=286 Identities=12% Similarity=0.150 Sum_probs=162.8
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHhc--------CC-CCEEEecCCCCCcHHHHHhhhccc------
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLL--------GT-GEEIVAGDDLYGGTDRLLSRVTPK------ 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~~--------~~-g~~Vlv~~~~~~~~~~~~~~~~~~------ 116 (386)
++...++.+.|.+++.. +...+++||++|+.+.+.+. .+ ..+|+.-...|++.......+...
T Consensus 98 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseAve~AlklAr~~~~~~g~tgr~~ii~~~~~YHG~t~~als~s~~~~~~~~ 177 (460)
T PRK06916 98 NVPSILLAEKLIEVVPEGLKKVFYSDSGATAVEIAIKMAFQYWQNKGKPKKQRFVTLKNAYHGDTIGAVSVGAIDLFHQV 177 (460)
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCcCCcccHHhHhccCCcccccc
Confidence 34555666677776643 46788899999986433321 12 357787777776643211111110
Q ss_pred CC---cEEEEeCCC-----------------CHHHHHhhhC---CCceEEEEeC-CCCCCccccc----HHHHHHHHHHc
Q 016612 117 TG---VVVKRVNTC-----------------DLDEVASAIG---PWTKLVWVES-PTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 117 ~g---~~~~~v~~~-----------------d~~~l~~~~~---~~~~~v~~~~-~~nptG~~~~----l~~i~~la~~~ 168 (386)
++ ..+..++.. +++++++.++ +++.+|+++. +....|.+.+ +++|.++|+++
T Consensus 178 ~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~iAAvi~EP~iqg~gG~~~~~~~fl~~lr~lc~~~ 257 (460)
T PRK06916 178 YSSLLFEAIKMPYPYTYRSPYGNDKAEIVKKHLEELEELLKEKHEEIAAIIVEPLVQGAGGMITMPKGYLKGLRNLCTKY 257 (460)
T ss_pred cCCCCCCCEEeCCCcccccccCCChHHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHc
Confidence 00 011222110 2455666664 6789999998 5776777753 89999999999
Q ss_pred CCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHH-------hhhhcCCC
Q 016612 169 GALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYF-------LQNAEGSG 234 (386)
Q Consensus 169 ~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~-------~~~~~~~~ 234 (386)
|+++|+||++.. |-.. ......+|+++ ++|.++| | +.+|.++++ +++.+.+.. .......+
T Consensus 258 g~llI~DEV~TG~GRtG~~~a~~~~gv~PDiv~--~gK~l~g--G~~Pi~av~~~-~ei~~~~~~~~~~~~~~~~~~T~~ 332 (460)
T PRK06916 258 NVLFITDEVATGFGRTGKMFACEHENVTPDIMT--AGKGLTG--GYLPIAITVTT-DEIYNAFYGDYEEQKTFFHGHSYT 332 (460)
T ss_pred CCEEEeechhhCCCcCchhhHHHhcCCCCCeee--eehhhhc--Cccccceeeec-HHHHHHhhccccccCccccCCCCC
Confidence 999999999742 2221 12234578886 5999864 4 347777776 456554421 11111223
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL----- 309 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----- 309 (386)
.++....+++..++.+.. +.+.++++.+.+++.+.-. .+..++. ..+.++.|.++.+.+...
T Consensus 333 gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~l~-------~l~~~~~----v~~vrG~Glm~giel~~~~~~~~ 399 (460)
T PRK06916 333 GNPLGCAVALANLELYEK--TNLIEQVARKTEYVATQLE-------DLFALKH----VGDIRQLGLMVGIELVKNKETKE 399 (460)
T ss_pred CCHHHHHHHHHHHHHHHh--ccHHHHHHHHHHHHHHHHH-------HhhcCCC----eEEeecCCceeeEEeeccccccc
Confidence 456666665555543322 2234444444444433110 0111111 112367788888877321
Q ss_pred ------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHH
Q 016612 310 ------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDK 379 (386)
Q Consensus 310 ------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~ 379 (386)
....++.+.+..+|+.+.+.+ +.+|+.+ +.++++++++.+.+
T Consensus 400 ~~~~~~~~~~~i~~~~~~~Gvl~~~~g----------------------------~~l~~~Ppl~it~~~id~~~~~l~~ 451 (460)
T PRK06916 400 PFEWTERVGVQVCKRSRELGMLTRPLG----------------------------NTIVFMPPLASTIDELDEMLRILYK 451 (460)
T ss_pred CCCchhhHHHHHHHHHHHCCeEEEecC----------------------------CEEEEeCCcccCHHHHHHHHHHHHH
Confidence 123567777777887654311 2367664 45889999999999
Q ss_pred HHhcCC
Q 016612 380 ALRTGP 385 (386)
Q Consensus 380 ~l~~~~ 385 (386)
+|++++
T Consensus 452 ~l~~~~ 457 (460)
T PRK06916 452 AISDVT 457 (460)
T ss_pred HHHhhc
Confidence 987753
No 348
>COG1921 SelA Selenocysteine synthase [seryl-tRNASer selenium transferase] [Amino acid transport and metabolism]
Probab=99.46 E-value=1.4e-12 Score=117.34 Aligned_cols=181 Identities=24% Similarity=0.236 Sum_probs=130.5
Q ss_pred HHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhcCCCCEEEecC-----CCCCcHHHHHhhhcccCCcEEEEeCCC---C
Q 016612 57 RDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGD-----DLYGGTDRLLSRVTPKTGVVVKRVNTC---D 128 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~-----~~~~~~~~~~~~~~~~~g~~~~~v~~~---d 128 (386)
...+.+.++..+|.+++.++++.+.|+.++...+.++.+|+++. +.+++. ..+.+..|.+++++... .
T Consensus 70 ~~~~~~~~~~~~~aea~~ivnnn~aAVll~~~al~~~~EvVis~g~lV~gg~~~v----~d~~~~aG~~l~EvG~tn~t~ 145 (395)
T COG1921 70 LTELAELLCGLTGAEAAAIVNNNAAAVLLTLNALAEGKEVVVSRGELVEGGAFRV----PDIIRLAGAKLVEVGTTNRTH 145 (395)
T ss_pred HHHHHHHHhcccchhheeeECCcHHHHHHHHhhhccCCeEEEEccccccCCCCCh----hHHHHHcCCEEEEecccCcCC
Confidence 44667777788888899999999988876555444455555433 345555 46778999999999864 7
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCccc--ccHHHHHHHHHHcCCEEEEeCCCCCCC-----ccCCCCCCccEEEeccccc
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQQI--CDIRKIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKF 201 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG~~--~~l~~i~~la~~~~~~li~D~a~~~~~-----~~~~~~~~~di~~~S~sK~ 201 (386)
..+++.++.+++++++-.+.+|. |.. .+.+++.++||++|+++++|.+.+... .......|+|++++|..|.
T Consensus 146 ~~d~~~AIne~ta~llkV~s~~~-~f~~~l~~~~l~~ia~~~~lpvivD~aSg~~v~~e~~l~~~la~GaDLV~~SgdKl 224 (395)
T COG1921 146 LKDYELAINENTALLLKVHSSNY-GFTGMLSEEELVEIAHEKGLPVIVDLASGALVDKEPDLREALALGADLVSFSGDKL 224 (395)
T ss_pred HHHHHHHhccCCeeEEEEeeccc-cccccccHHHHHHHHHHcCCCEEEecCCccccccccchhHHHhcCCCEEEEecchh
Confidence 89999999999999988877774 555 478899999999999999999976432 2234467999999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhc
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRG 246 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (386)
++||. .|+++++++ +..+++......+.-......+.+.++
T Consensus 225 lgGPq---aGii~GkKe-lI~~lq~~~l~Ralrv~K~tla~l~~a 265 (395)
T COG1921 225 LGGPQ---AGIIVGKKE-LIEKLQSHPLKRALRVDKETLAALEAA 265 (395)
T ss_pred cCCCc---cceEechHH-HHHHHHhhhhhhhhhcCcHhHHHHHHH
Confidence 98875 799999855 545454433333333333334333333
No 349
>PRK06931 diaminobutyrate--2-oxoglutarate aminotransferase; Provisional
Probab=99.46 E-value=4.3e-12 Score=121.08 Aligned_cols=288 Identities=17% Similarity=0.170 Sum_probs=161.1
Q ss_pred CCchHHHHHHHHHhhcCCC----ceEEe-CcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhccc------C-
Q 016612 53 GNPTRDALESLLAKLDKAD----RALCF-TSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVTPK------T- 117 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~----~~i~~-~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~~~------~- 117 (386)
.++...++.+.+.+.++.. ..+++ +||++|+.+.+. .....++|+.-...|++.......+... +
T Consensus 99 ~~~~~~~lAe~L~~~~p~~~~~~~~~f~~~SGsEAve~AlklAr~~tgr~~Ii~~~~~yHG~t~~als~t~~~~~~~~~~ 178 (459)
T PRK06931 99 TTPLKDAFSEYLLSLLPGQGKEYCLQFTGPSGADAVEAAIKLAKTYTGRSNVISFSGGYHGMTHGALAVTGNLSPKNAVN 178 (459)
T ss_pred CCHHHHHHHHHHHHhCCCccccceEEEeCCCcHHHHHHHHHHHHHhcCCCeEEEECCCcCCccHHHHhhcCCcccccCCC
Confidence 3456667777777776422 23344 799999864333 2334567887777776654332221110 0
Q ss_pred --CcEEEEeCCC-------------CHHHH----HhhhC------CCceEEEEeCCCCCCccccc----HHHHHHHHHHc
Q 016612 118 --GVVVKRVNTC-------------DLDEV----ASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 118 --g~~~~~v~~~-------------d~~~l----~~~~~------~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~ 168 (386)
...+..++.. +.+.+ ++.+. +++.+|+++......|.+.+ ++++.++|++|
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iAAvI~EPiqg~gG~~~~~~~yl~~lr~lc~~~ 258 (459)
T PRK06931 179 GLMPGVQFMPYPHEYRCPLGIGGEAGVKALTYYFENFIEDVESGVRKPAAVILEAIQGEGGVNPAPVEWLQKIREVTQKH 258 (459)
T ss_pred CCCCCcEEeCCCccccccccCCchhHHHHHHHHHHHHHHhhhcCCCceEEEEEccccCCCCCcCCCHHHHHHHHHHHHHc
Confidence 1112233321 12222 23332 35889999988777777754 89999999999
Q ss_pred CCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 169 GALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 169 ~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
|+++|.||++.. |-.. ......+|+++. +|.+++ |+.+|.++++ +++ +.+.........+.++...++
T Consensus 259 g~LlI~DEV~tGfGRtG~~~a~~~~gv~PDivt~--gK~l~g--G~Pi~av~~~-~~~-~~~~~~~~~~T~~gnpla~aa 332 (459)
T PRK06931 259 GILLIVDEVQAGFARTGKMFAFEHAGIEPDIIVM--SKAVGG--GLPLAVLGIK-KEF-DAWQPGGHTGTFRGNQLAMAT 332 (459)
T ss_pred CCEEEEecchhcCCcCchHHHhhhcCCCCCEEEe--cccccC--CcceeeeeeH-HHH-hhccCCCCCCCCCCCHHHHHH
Confidence 999999999752 2111 122346788864 999965 4567777765 333 322211222223456666666
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--------------
Q 016612 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------- 308 (386)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------------- 308 (386)
++..++.+.. +...++++.+.+++.+.-. . + .+.++. ..+.++.|.++.+.+..
T Consensus 333 ala~L~~l~~--~~l~~~~~~~G~~l~~~L~--~-l---~~~~~~----i~~vrG~Glm~giel~~~~~~~~~~~~~~~~ 400 (459)
T PRK06931 333 GLTTLKILKE--ENLAQNAAERGEWLKAQLA--E-L---QKRYPC----IGNVRGRGLMIGIEIVDERQPADAMGSYPAD 400 (459)
T ss_pred HHHHHHHHHh--CCHHHHHHHHHHHHHHHHH--H-H---HHhCCC----eEeEecCceEEEEEEccCcccccccccCCcc
Confidence 6555543322 2344555555544442210 0 0 011110 12236788888888721
Q ss_pred HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 309 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 309 ~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
......+.+.+...|+.+.+.+. ..+.+|+.+. .++++++++.+.++|++
T Consensus 401 ~~~~~~~~~~~~~~Gvl~~~~~~-------------------------~~~~l~~~Ppl~it~~eid~~~~~l~~~l~~ 454 (459)
T PRK06931 401 GELAAAIQKACFENGLLLERGGR-------------------------NGNVVRLLPPLLITQAECEEFIDRFEQALLA 454 (459)
T ss_pred HHHHHHHHHHHHHCCcEEeecCC-------------------------CCCEEEEECCCCcCHHHHHHHHHHHHHHHHH
Confidence 12345677777777776543211 1344887765 48888888888888765
No 350
>PRK07036 hypothetical protein; Provisional
Probab=99.46 E-value=1.9e-11 Score=116.95 Aligned_cols=283 Identities=17% Similarity=0.218 Sum_probs=161.2
Q ss_pred chHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---c----C-C-CCEEEecCCCCCcHHHHHhhhcccC------
Q 016612 55 PTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---L----G-T-GEEIVAGDDLYGGTDRLLSRVTPKT------ 117 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~----~-~-g~~Vlv~~~~~~~~~~~~~~~~~~~------ 117 (386)
+...++.+.+.+.... +...+++||++|+.+.+.+ . . + ..+|+.-+..|++.......+....
T Consensus 95 ~~~~~lae~L~~~~p~~~~~v~f~~sGseAve~AlklAr~~~~~~g~t~r~~Ii~~~~~YHG~t~~a~s~~~~~~~~~~~ 174 (466)
T PRK07036 95 APAAELAAKLAELAPGDLNHVFLTTGGSTAVDSALRFVHYYFNVRGRPAKKHIITRGDAYHGSTYLTASLTGKAADRTEF 174 (466)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCchHHHHHHHHHHHHHHHhcCCCCccEEEEEcCccCCccHhhhcccCCCcccccc
Confidence 4455566666665532 3677888999998643332 1 1 1 3578877777766432211111100
Q ss_pred C---cEEEEeCCCC-----------------HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcC
Q 016612 118 G---VVVKRVNTCD-----------------LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHG 169 (386)
Q Consensus 118 g---~~~~~v~~~d-----------------~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~ 169 (386)
+ ..+..++..+ .+.+++.+. +++.+|+++......|.+.| +++|.++|++||
T Consensus 175 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~iAavi~EPv~g~gG~~~p~~~yl~~lr~lc~~~g 254 (466)
T PRK07036 175 DYASDLVHHLSSPNPYRRPAGMSEAAFCDFLVDEFEDKILSLGADNIAAFIAEPILGSGGVIVPPPGYHARMREICRRYD 254 (466)
T ss_pred cCCCCCcEEecCCcccccccCCChHHHHHHHHHHHHHHHHHcCCCceEEEEEeCCcCCCCCccCCHHHHHHHHHHHHHcC
Confidence 0 0122222111 233444442 57889999998887888876 899999999999
Q ss_pred CEEEEeCCCC-CCCcc------CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHh-------hhhcCCC
Q 016612 170 ALLLVDNSIM-SPVLS------RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFL-------QNAEGSG 234 (386)
Q Consensus 170 ~~li~D~a~~-~~~~~------~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~-------~~~~~~~ 234 (386)
+++|+||++. .|-.. ......+|+++ ++|.+++ | +.+|.++++ +++.+.+... ......+
T Consensus 255 ~llI~DEV~tGfGRtG~~~~~~~~~gv~PDivt--~gK~l~g--G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~~~~T~~ 329 (466)
T PRK07036 255 ILYISDEVVTGFGRLGHFFASEAVFGIQPDIIT--FAKGLTS--GYQPLGAVIIS-ERLLDVISGPNAKGNVFTHGFTYS 329 (466)
T ss_pred CEEEEeechhCCCcCchhhhhhhhcCCCCCEEE--Ecccccc--CccccEEEEEc-HHHHHHHhcccCcCcccccCCCCC
Confidence 9999999974 22221 12234678886 5999865 3 236777776 5566554321 1111224
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC------
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS------ 308 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------ 308 (386)
.++...++.+..++.+.. +...++++.+.+++.+.-. .+..++. ..+.++.|.++.+.+..
T Consensus 330 gnpl~~aaa~a~Le~i~~--~~l~~~~~~~g~~l~~~L~-------~l~~~~~----v~~vrG~Gl~~~ve~~~~~~~~~ 396 (466)
T PRK07036 330 GHPVACAAALKNIEIMER--EGLCEHVREVGPYFEERLA-------SLRELPL----VGDVRGDHLMACVECVADKGSKA 396 (466)
T ss_pred CCHHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHH-------HhccCCC----EEEEEeeceEEEEEEccCccccC
Confidence 456666666665554422 2344555555555543210 1111111 12236778888888732
Q ss_pred -----HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHH
Q 016612 309 -----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDK 379 (386)
Q Consensus 309 -----~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~ 379 (386)
......+.+.+..+|+.+.+.. +.+|+++ +.+++++.++.+.+
T Consensus 397 ~~~~~~~~~~~~~~~~~~~Gvl~~~~~----------------------------~~~~l~Ppl~it~~~id~~~~~l~~ 448 (466)
T PRK07036 397 LLPEDIAIGQRIDRHCQERGLLVRPLE----------------------------HLCVLSPPLIITRAQIDEIVAILRA 448 (466)
T ss_pred CCCchhHHHHHHHHHHHHCCcEEeecC----------------------------CEEEEeCCCcCCHHHHHHHHHHHHH
Confidence 1234567777777777654211 2266664 45888888888888
Q ss_pred HHhc
Q 016612 380 ALRT 383 (386)
Q Consensus 380 ~l~~ 383 (386)
+|++
T Consensus 449 al~~ 452 (466)
T PRK07036 449 AIEE 452 (466)
T ss_pred HHHH
Confidence 8765
No 351
>PRK00615 glutamate-1-semialdehyde aminotransferase; Provisional
Probab=99.45 E-value=1.3e-11 Score=116.81 Aligned_cols=285 Identities=13% Similarity=0.104 Sum_probs=162.9
Q ss_pred chHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHH-Hhh--hc--------ccC-
Q 016612 55 PTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRL-LSR--VT--------PKT- 117 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~-~~~--~~--------~~~- 117 (386)
+...++.+.+.+.++. +...+++||++|+.+.+.+ .....+|+.-...|++.... +.. .. ...
T Consensus 93 ~~~~~la~~L~~~~~~~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~td~~~~~~~~~~~~~~~~~~~~~ 172 (433)
T PRK00615 93 EQEILFAEELFSYLGLEDHKIRFVSSGTEATMTAVRLARGITGRSIIIKFLGCYHGHADTLLQGISFSETSLDTLTHLVD 172 (433)
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCCcccCcccccCCCCcCcCCCCCC
Confidence 4556666777776654 3678889999998643332 23345777767677664210 000 00 000
Q ss_pred ----CcEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCC-cc-
Q 016612 118 ----GVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV-LS- 184 (386)
Q Consensus 118 ----g~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~-~~- 184 (386)
......++..|.+++++.+. +++.+|+++......|.+.| +++|.++|++||+++|+||++. |. ..
T Consensus 173 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~aavI~Epv~~~~G~~~p~~~yl~~l~~lc~~~g~llI~DEv~t-G~R~G~ 251 (433)
T PRK00615 173 TDLAHPLTLSLPYNDFQIFQTVMNSLGHRVAGVIFEPICANMGVVLPKPGFIEGIIQTCRRTGSLSIMDEVVT-GFRVAQ 251 (433)
T ss_pred CCCCCCCeEeCCCCCHHHHHHHHHhcCCceEEEEECCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcccc-cccccH
Confidence 01122334457888888774 46789999998888888876 6799999999999999999984 22 11
Q ss_pred ----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---hhcCCCCChhhHHHHHhcCCcHHH--HHH
Q 016612 185 ----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMAL--RVE 255 (386)
Q Consensus 185 ----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 255 (386)
.......|+++ ++|.+++ |+.+|+++++ +++.+.+.... .......++...++.+..++.+.. ..+
T Consensus 252 ~ga~~~~gv~PDi~~--~gK~lgg--G~p~~av~~~-~~i~~~~~~~~~~~~~~T~~g~p~~~aa~la~L~~i~~~~~~~ 326 (433)
T PRK00615 252 GGAAAIYHVKPDITV--YGKILGG--GLPAAAVVAH-KSIMDHLAPEGTIFQAGTLSGNPLAMAAGKASINLCREQGFYT 326 (433)
T ss_pred hHHHHhcCCCCCeEE--EcccccC--Ccceeeeeec-HHHHhhhcCCCCcccCCCCcccHHHHHHHHHHHHHHhcccHHH
Confidence 11234578875 6999964 3457888886 55655543211 112224466666666665554321 122
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------------CHHhHHHHHhhcCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYF 322 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~~ 322 (386)
+..+..+.+.+.+++... + .+++ +. ..+ .|.++.+.+. +......+..++..+
T Consensus 327 ~~~~~g~~l~~~l~~~~~--~---~g~~----v~----~~r-~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 392 (433)
T PRK00615 327 QLSTLEQNFLSPIEEMIR--S---QGFP----VS----LVR-YGSMFSFFFNENRPNNLAEAQLSDIEAFQTFYQSAFSK 392 (433)
T ss_pred HHHHHHHHHHHHHHHHHH--H---cCCC----eE----EEe-eceEEEEEEeCCCCCChHHHhhCCHHHHHHHHHHHHHC
Confidence 233333333333332100 0 0111 00 012 4566666662 223345778888788
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
|+...+... | ..+++..-+.++++++++.+.+++++.
T Consensus 393 Gv~~~~~~~------~-------------------~~~ls~~ht~~did~~~~a~~~~~~~~ 429 (433)
T PRK00615 393 GVYLSPSPF------E-------------------ASFLSSAHSMENLDYAQNVLIDSLEKV 429 (433)
T ss_pred CeeecCccc------c-------------------ccceecCCCHHHHHHHHHHHHHHHHHH
Confidence 886544321 0 112444445688899999999888764
No 352
>PF04864 Alliinase_C: Allinase; InterPro: IPR006948 Allicin is a thiosulphinate that gives rise to dithiines, allyl sulphides and ajoenes, the three groups of active compounds in Allium species. Allicin is synthesised from sulphoxide cysteine derivatives by alliinase, whose C-S lyase activity cleaves C(beta)-S(gamma) bonds. It is thought that this enzyme forms part of a primitive plant defence system [].; GO: 0016846 carbon-sulfur lyase activity; PDB: 1LK9_B 2HOX_C 2HOR_A 3BWO_D 3BWN_B.
Probab=99.45 E-value=4.6e-13 Score=117.13 Aligned_cols=284 Identities=17% Similarity=0.205 Sum_probs=150.7
Q ss_pred chHHHHHHHHHhhc---CC----CceEEeCcHH-HHHHH-HHHhcC----CC--CEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 55 PTRDALESLLAKLD---KA----DRALCFTSGM-AALAA-VTHLLG----TG--EEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 55 ~~~~~l~~~l~~~~---g~----~~~i~~~~gt-~al~~-~~~~~~----~g--~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
-+..+|++.+.++. |- +..|++++|+ +.+++ +.++-. .+ -.|+...|.|+.+... ...++....
T Consensus 43 f~s~eL~~~Ir~LH~~VGNAvt~gr~IV~GtGsTQL~~AalyALSp~~~~~~~p~~VVa~aPYY~~Y~~q-t~~f~s~~y 121 (363)
T PF04864_consen 43 FISPELERQIRRLHRVVGNAVTDGRYIVFGTGSTQLFNAALYALSPNASPSSSPASVVAAAPYYSSYPEQ-TDFFDSRLY 121 (363)
T ss_dssp TS-HHHHHHHHHHHHHH-SB--TTSEEEEECHHHHHHHHHHHHHCHHT-TTSSSEEEEE-SS--CHHHHH-CCCT-BTTE
T ss_pred eccHHHHHHHHHHHHHhccccccCcEEEEcCCHHHHHHHHHHhcCCCCCCCCCCceeEecCCCccchHHH-HHhccccCc
Confidence 35666666666653 31 2678888886 77764 444321 11 3688999999888532 122322222
Q ss_pred EEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC-CCCCCccEEEecc
Q 016612 120 VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSA 198 (386)
Q Consensus 120 ~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-~~~~~~di~~~S~ 198 (386)
+..- |...+...-+..+-+=++++||||.|.+- +.+ .+..+..+|.|-+|..|++.. +...+-||.++|+
T Consensus 122 ~w~G----da~~~~~~~~~~~~IElVTSPNNPDG~lr--~~V---~~g~~~k~I~D~AYYWPhyTpI~~~aD~DiMLFT~ 192 (363)
T PF04864_consen 122 KWAG----DASNFKNSDNPSPYIELVTSPNNPDGQLR--EAV---LNGSSGKVIHDLAYYWPHYTPITAPADHDIMLFTL 192 (363)
T ss_dssp EEEE----ECCCGTT-S-CCGEEEEEESS-TTT--------S---STTTEEEEEEE-TT-STTTS---S-B--SEEEEEH
T ss_pred cccc----cHHhhccCCCCCCeEEEEeCCCCCccccc--chh---cCCCCcceeeeeeeecccccccCCCCCCceEEEEE
Confidence 2111 22222221123455667889999999863 111 233456679999999998653 2335779999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC--------------cHHHHHHHHHHHHHHH
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK--------------TMALRVEKQQDNAQKI 264 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~l 264 (386)
||.- |++|.|.||.+++++++.+++.........+.+..++.-++.-++ .+..-.+...+.-++|
T Consensus 193 SK~T-GHAGSR~GWAlVKD~~Va~kM~~y~~lnTiGvS~dsQLRa~kiLk~v~~~~~~~~~~~~~F~f~~~~M~~RW~~L 271 (363)
T PF04864_consen 193 SKLT-GHAGSRFGWALVKDEEVAKKMTKYMELNTIGVSRDSQLRALKILKVVLDGYGTEKGTEDIFHFGYSTMRERWEKL 271 (363)
T ss_dssp HHHC-S-GGG-EEEEEES-HHHHHHHHHHHHHHCSS--HHHHHHHHHHHHHHHHHCCHHTTTTSHHHHHHHHHHHHHHHH
T ss_pred eccc-CccccccceeeecCHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHhcccCCCCccchHHHHHHHHHHHHHHH
Confidence 9986 899999999999999998888777666677777766544332211 1222234455566677
Q ss_pred HHHHhhCCCcceEecCCCCCCCchhhhhhc-cCCCCceEEEEeCCH--HhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 265 AEFLASHPRVKKVNYAGLPEHPGHELHYSQ-AKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
.+.+.+.. .+..+.+. ++..-+.+. ......+-|+..+.+ ..+..++++.+ |..+.|..
T Consensus 272 ~~~~~~S~---rFSLq~~~--~~yC~ff~~~~~psPafAWlkCe~eed~DC~~~l~~~~---I~tr~G~~---------- 333 (363)
T PF04864_consen 272 RAAVSASK---RFSLQKFS--PQYCNFFKRVREPSPAFAWLKCEREEDEDCYAVLREAK---IITRSGVL---------- 333 (363)
T ss_dssp HHHHCCSS---SEEE---S--CEEETTTTCEEE---SEEEEEESSCGGSSHHHHHHCTT---EEEEEGGG----------
T ss_pred HHHHHhcC---ceecCcCC--chhccccccccCCCCCeEEEecCCcccccHHHHHHhCC---cccCCCCc----------
Confidence 77777654 23333331 122222221 122345667777532 46777777654 54454443
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHH
Q 016612 342 SHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDK 379 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~ 379 (386)
+|.+..|+|||+- .++-+.++++|..
T Consensus 334 ------------fga~~ryVRlSml~~~d~Fd~l~~rL~~ 361 (363)
T PF04864_consen 334 ------------FGADSRYVRLSMLKRDDDFDQLLERLSK 361 (363)
T ss_dssp ------------GTS-TTEEEEESSS-HHHHHHHHHHHHC
T ss_pred ------------cCCCCCeEEEeccCCHHHHHHHHHHHHh
Confidence 2456888999984 4777777777753
No 353
>PRK06917 hypothetical protein; Provisional
Probab=99.45 E-value=5.3e-12 Score=120.14 Aligned_cols=323 Identities=13% Similarity=0.123 Sum_probs=177.8
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCcccc-CCCCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHhc------
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYT-RSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLL------ 90 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~-~~g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~~------ 90 (386)
+..+|..+|.+.++...... . ..+.+. ...++...++.+.|.+.+.. +..++++||++|+.+.+.+.
T Consensus 42 ~~~lGh~hp~v~~Ai~~ql~---~-~~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~ 117 (447)
T PRK06917 42 TAGIGHGVKEIADAIKEQAE---E-VSFVYRSQFTSEPAEKLAKKLSDLSPGDLNWSFFVNSGSEANETAMKIAIQHFQE 117 (447)
T ss_pred hccCCCCCHHHHHHHHHHHh---h-CcCccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHHh
Confidence 45578888887775322221 1 112111 12445677888888888753 35677899999986443322
Q ss_pred ---CCCCEEEecCCCCCcHHHHHhhhcccC-----------CcEEEEeCC---------------CCHHHHHhhhC----
Q 016612 91 ---GTGEEIVAGDDLYGGTDRLLSRVTPKT-----------GVVVKRVNT---------------CDLDEVASAIG---- 137 (386)
Q Consensus 91 ---~~g~~Vlv~~~~~~~~~~~~~~~~~~~-----------g~~~~~v~~---------------~d~~~l~~~~~---- 137 (386)
....+|+.-...|++.......+.... +......+. .+++.+++.++
T Consensus 118 rg~t~r~~ii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~le~~i~~~~~ 197 (447)
T PRK06917 118 RGIQGKHKILSRWMSYHGITMGALSMSGHPLRRQRFVSLLEDYPTISAPYCYRCPVQKVYPTCQLACATELETAIERIGA 197 (447)
T ss_pred cCCCCCCEEEEECCCcCCccHHHHHhcCCccccccCCCCCCCCeEeCCCcccccccCCChHHHHHHHHHHHHHHHHhcCC
Confidence 123578877777766532211211100 111111110 02355666664
Q ss_pred CCceEEEEeCCCCC-Cccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCC
Q 016612 138 PWTKLVWVESPTNP-RQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHS 206 (386)
Q Consensus 138 ~~~~~v~~~~~~np-tG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~ 206 (386)
+++.+|+++..... .|.+.+ +++|.++|++||+++|+||++.. |-.. ......+|+++ ++|.+++
T Consensus 198 ~~iAAvi~EPi~g~~gG~~~p~~~fl~~lr~lc~~~g~llI~DEv~tGfGRtG~~~a~~~~gv~PDi~~--~gK~l~~-- 273 (447)
T PRK06917 198 EHIAAFIAEPIIGAAGAAVVPPKGYYKVIKEICDHYDILFIADEVMTGLGRTGAMFAMEHWGVEPDIMT--LGKGLGA-- 273 (447)
T ss_pred CceEEEEEeccccCcCceecCCHHHHHHHHHHHHHcCCEEEEechhhCcCcccchhhHHhcCCCCCEEE--eeehhcc--
Confidence 46899999987653 345543 89999999999999999999752 1111 12234578875 5999965
Q ss_pred Cc-eEEEEEEcChhHHHHHHHh----hhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCC
Q 016612 207 DV-MAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 281 (386)
Q Consensus 207 g~-~~G~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 281 (386)
|. .+|.++++ +++.+.+..- ......+.++...++.+..++.+.. +...++++.+.+++.+.-. . +.
T Consensus 274 G~~Pi~a~~~~-~~i~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~l~~l~~--~~l~~~~~~~g~~l~~~L~--~-l~-- 345 (447)
T PRK06917 274 GYTPIAATVVS-DRVMEPILRGSRSIMSGHTLSANPLSAATALAVLEYMEK--HNLPEKAAEKGEYLIKGLQ--K-VQ-- 345 (447)
T ss_pred CCcceEEEEEc-HHHHHHHhccCcccccccCCCCCHHHHHHHHHHHHHHHH--CCHHHHHHHHHHHHHHHHH--H-HH--
Confidence 32 36777776 4565544321 1112234566666666665554322 2233444444443332100 0 00
Q ss_pred CCCCCchhhhhhccCCCCceEEEEeC-C----------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHH
Q 016612 282 LPEHPGHELHYSQAKGAGSVLSFLTG-S----------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 350 (386)
Q Consensus 282 l~~~~~~~i~~~~~~~~~~~~~~~~~-~----------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~ 350 (386)
..++. ..+.++.|.++.+.+. + ......+.+.+...|+.+.+.....
T Consensus 346 -~~~~~----i~~vrG~Gl~~~ie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gvl~~~~~~~~----------------- 403 (447)
T PRK06917 346 -QQSTI----IGDVRGKGLLIGVEFVADKKTKQPFSKSQAVASELISVAAKNGLLLYPAVAGQ----------------- 403 (447)
T ss_pred -hcCCC----EEEEeecceEEEEEEeccCCcCCCCcchhHHHHHHHHHHHhCCcEEEeccccc-----------------
Confidence 00110 0123667888888772 1 1335677777888888654321100
Q ss_pred HHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 351 RQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 351 ~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.+...+.+|+++. .++++++++.+.++|++
T Consensus 404 ---~g~~~~~i~l~Ppl~it~~eid~~~~~l~~~l~~ 437 (447)
T PRK06917 404 ---DGKEGDAVIIAPPMTITYSELDELLSIFAKSVEE 437 (447)
T ss_pred ---CCCCCCEEEEECCCcCCHHHHHHHHHHHHHHHHH
Confidence 0111345888865 48888888888888765
No 354
>PRK15400 lysine decarboxylase CadA; Provisional
Probab=99.45 E-value=8e-12 Score=122.25 Aligned_cols=153 Identities=15% Similarity=0.162 Sum_probs=116.8
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...+.++.+++.||++...++++|| .++. ++++++++||.||+.+.+|-+..+ .+...|+..+++.+.
T Consensus 196 ~i~eAe~~AA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~h----aLilsga~PVYl~P~rn~~Gi 271 (714)
T PRK15400 196 PHKEAEEYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTVLIDRNCHKSLTH----LMMMSDVTPIYFRPTRNAYGI 271 (714)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCchHHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeEEEecccccccCC
Confidence 5788999999999999877777776 6665 667789999999999999988764 344788888887642
Q ss_pred ---------CHHHHHhhhCC--Cce---EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCC-----Ccc--CC
Q 016612 128 ---------DLDEVASAIGP--WTK---LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSP-----VLS--RP 186 (386)
Q Consensus 128 ---------d~~~l~~~~~~--~~~---~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~-----~~~--~~ 186 (386)
+.+.+++.+.. +.+ .+++++|++ .|.+.+++.|.+.|+.++ |++||||+.- .+. +.
T Consensus 272 ~g~I~~~~~~~e~i~~~i~~~p~ak~p~~~vit~pTY-dG~~yd~~~I~~~~~~~~--ilvDEAwgah~~F~p~~~~~sa 348 (714)
T PRK15400 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNSTY-DGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCG 348 (714)
T ss_pred ccCCCccccCHHHHHHHHHhCccccCccEEEEECCCC-ccEecCHHHHHHHhCCCC--EEEEccchhhhccCcccCCcCh
Confidence 37888888862 333 788888866 799999999999999887 7899998632 121 12
Q ss_pred CCCCc---c--EEEeccccccccCCCceEEEEEEcC
Q 016612 187 LELGA---D--IVMHSATKFIAGHSDVMAGVLAVKG 217 (386)
Q Consensus 187 ~~~~~---d--i~~~S~sK~~~g~~g~~~G~i~~~~ 217 (386)
...++ | +++.|.||.+.+... ++++..+.
T Consensus 349 m~~ga~~~~~i~vtQStHKtL~alTQ--aS~LHvkg 382 (714)
T PRK15400 349 MSGGRVEGKVIYETQSTHKLLAAFSQ--ASMIHVKG 382 (714)
T ss_pred hhcCCCCCCceEEEEchhhcccchhH--HhHHHHcC
Confidence 22344 4 999999999987654 56665543
No 355
>PRK15399 lysine decarboxylase LdcC; Provisional
Probab=99.44 E-value=3e-11 Score=118.25 Aligned_cols=153 Identities=14% Similarity=0.155 Sum_probs=116.3
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...+.++.+++.||++...++++|| .++. ++++.+++||.||+.+.+|-+..+ .+-..|+..+++.+.
T Consensus 196 ~i~eAe~~aA~~fgAd~tyfvvNGTS~~n~av~~a~~~~Gd~VLvdRN~HKSv~~----aLilsga~PVYl~P~~n~~Gi 271 (713)
T PRK15399 196 PHLEAEEYIARTFGAEQSYIVTNGTSTSNKIVGMYAAPAGSTLLIDRNCHKSLAH----LLMMSDVVPIWLKPTRNALGI 271 (713)
T ss_pred HHHHHHHHHHHHhCCCcEEEEeCChHHHHHHHHHHhcCCCCEEEeecccHHHHHH----HHHHcCCeeEEecccccccCC
Confidence 5788999999999999877777776 6664 677899999999999999988764 344778888887642
Q ss_pred ----C-----HHHHHhhhCC-----CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEE-EEeCCCCCCC-----cc--C
Q 016612 128 ----D-----LDEVASAIGP-----WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALL-LVDNSIMSPV-----LS--R 185 (386)
Q Consensus 128 ----d-----~~~l~~~~~~-----~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~l-i~D~a~~~~~-----~~--~ 185 (386)
+ .+.+++.+.. +++++++++|++ .|.+.+++.|.+.| |+.+ ++||||+.-. +. .
T Consensus 272 ~g~I~~~~~~~e~I~~~i~~~p~~~~p~~vvit~pTY-dGi~yd~~~I~~~~---g~~~ilvDEAhgah~~F~p~~~~~s 347 (713)
T PRK15399 272 LGGIPRREFTRDSIEEKVAATTQAQWPVHAVITNSTY-DGLLYNTDWIKQTL---DVPSIHFDSAWVPYTHFHPIYQGKS 347 (713)
T ss_pred cCCCChhhccHHHHHHHHHhCCCcCCceEEEEECCCC-CceeeCHHHHHHHh---CCCEEEEeccchhhhhcCcccCCcC
Confidence 3 3888888752 236888999966 79999999999999 5665 6999986311 11 1
Q ss_pred CCCC--CccEE---EeccccccccCCCceEEEEEEcCh
Q 016612 186 PLEL--GADIV---MHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 186 ~~~~--~~di~---~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
.... ++|.+ +.|.||.+.+... ++++..+..
T Consensus 348 am~~~~~aD~~i~~tQStHKtL~alTQ--aS~iHvk~~ 383 (713)
T PRK15399 348 GMSGERVPGKVIFETQSTHKMLAAFSQ--ASLIHIKGE 383 (713)
T ss_pred hhhCCCCCCeeeeeeeehhccccccch--heeeeecCC
Confidence 1112 46766 9999999988764 788887653
No 356
>PRK07483 hypothetical protein; Provisional
Probab=99.44 E-value=3e-12 Score=121.74 Aligned_cols=324 Identities=15% Similarity=0.142 Sum_probs=178.4
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHH---hc----
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH---LL---- 90 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~---~~---- 90 (386)
...+|..+|.+.++......+. .........++...++.+.|.++.. .+...+++||++|+.+.+. ..
T Consensus 41 ~~~lGh~~p~v~~av~~ql~~~---~~~~~~~~~~~~~~~lae~L~~~~p~~~~~v~f~~sGsEAve~AlklAr~~~~~~ 117 (443)
T PRK07483 41 VSCLGHSHPRVIAAIHAQIDRL---AYAHTSFFTTEPAEALADRLVAAAPAGLEHVYFVSGGSEAVEAALKLARQYFVEI 117 (443)
T ss_pred hhccCCCCHHHHHHHHHHHHhc---cCccccccCCHHHHHHHHHHHHhCCCCCCEEEEcCCcHHHHHHHHHHHHHHHHhc
Confidence 5557888888776433222111 1001111234667778888888764 3578888999999863322 12
Q ss_pred -CC-CCEEEecCCCCCcHH-HHHhhhc------ccCC---cEEEEeCC----CC--------------HHHHHhhhC---
Q 016612 91 -GT-GEEIVAGDDLYGGTD-RLLSRVT------PKTG---VVVKRVNT----CD--------------LDEVASAIG--- 137 (386)
Q Consensus 91 -~~-g~~Vlv~~~~~~~~~-~~~~~~~------~~~g---~~~~~v~~----~d--------------~~~l~~~~~--- 137 (386)
++ ..+|+.-...|++.. ..+ .+. ..++ ..+..++. .+ ++++++.+.
T Consensus 118 g~~~r~~Ii~~~~~YHG~t~~a~-s~s~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 196 (443)
T PRK07483 118 GQPQRRHFIARRQSYHGNTLGAL-AIGGNAWRREPFAPLLIEAHHVSPCYAYREQRAGESDEAYGQRLADELEAKILELG 196 (443)
T ss_pred CCCCCcEEEEECCCcCCcCHHHh-hhcCCcccccccCCCCCCCEEeCCCccccccccCCCHHHHHHHHHHHHHHHHHhcC
Confidence 12 246777666666552 221 111 0011 11122221 11 256665552
Q ss_pred -CCceEEEEeCCCC-CCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccC
Q 016612 138 -PWTKLVWVESPTN-PRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGH 205 (386)
Q Consensus 138 -~~~~~v~~~~~~n-ptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~ 205 (386)
+++.+|+++.... ..|.+.+ ++.|.++|++||+++|+||++. .|-.. ......+|+++. +|.+++
T Consensus 197 ~~~iAAvivEPiqg~~gG~~~~~~~fl~~lr~lc~~~gillI~DEV~tGfGRtG~~~a~~~~gv~PDiv~~--gK~l~g- 273 (443)
T PRK07483 197 PDTVAAFVAETVVGATAGAVPPVPGYFKRIREVCDRYGVLLILDEVMCGMGRTGTLFACEEDGVAPDLVTI--AKGLGA- 273 (443)
T ss_pred CCceEEEEEeCcccCcCCeEeCCHHHHHHHHHHHHHhCCEEEEecceeCcccCcHHHHHhhcCCCCCeeee--hhhhcc-
Confidence 5788999998875 3466654 8999999999999999999975 22211 122346788875 999865
Q ss_pred CCc-eEEEEEEcChhHHHHHHHh----hhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecC
Q 016612 206 SDV-MAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYA 280 (386)
Q Consensus 206 ~g~-~~G~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 280 (386)
|+ .+|.++++ +++.+.+..- ......+.++...++....++.+.. +.+.++++.+.+++.+.-. .
T Consensus 274 -G~~Pi~av~~~-~~i~~~~~~~~~~~~h~~T~~gnpl~~aaa~a~l~~i~~--~~l~~~~~~~g~~l~~~L~--~---- 343 (443)
T PRK07483 274 -GYQPIGAVLAS-DRIYDAIADGSGFFQHGHTYLGHATACAAALAVQRVIAE--DGLLANVRARGEQLRARLR--E---- 343 (443)
T ss_pred -CccccEEEEEc-HHHHHHHhcCCCccccCCCCCCCHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH--H----
Confidence 43 46777776 4565544321 1122234456666665555543322 3344555555555543210 0
Q ss_pred CCCCCCchhhhhhccCCCCceEEEEeCCH-----------HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHH
Q 016612 281 GLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 349 (386)
Q Consensus 281 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~ 349 (386)
..+.++. ..+.++.|.++.+.+... .....+.+.+..+|+.+.+.....
T Consensus 344 l~~~~~~----i~~vRG~Glm~gie~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~~~~~---------------- 403 (443)
T PRK07483 344 RLGQHPH----VGDIRGRGLFVGVELVADRATKAPFDPALKLHARIKREAMARGLMVYPMGGTI---------------- 403 (443)
T ss_pred HHhcCCC----eeeEeecccEEEEEEeecccccCCCCchhhHHHHHHHHHHHCCcEEEecCccc----------------
Confidence 0011110 012267788888877211 234567777777887654311000
Q ss_pred HHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 350 VRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 350 ~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+...+.+|+.+. .+++++.++.+.++|+++
T Consensus 404 ----~~~~~~~l~~~PpL~it~~eid~~~~~l~~~l~~~ 438 (443)
T PRK07483 404 ----DGVRGDHVLLAPPFIITAAQIDEIVERLGDAIDAA 438 (443)
T ss_pred ----cCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 0011345888764 588999999998888753
No 357
>COG0161 BioA Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]
Probab=99.44 E-value=4.8e-12 Score=116.57 Aligned_cols=290 Identities=17% Similarity=0.191 Sum_probs=171.9
Q ss_pred CCchHHHHHHHHHhhcC---CCceEEeCcHHHHHHHHHHh----c----CC-CCEEEecCCCCCcH-HHHHhhhcc----
Q 016612 53 GNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTHL----L----GT-GEEIVAGDDLYGGT-DRLLSRVTP---- 115 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~~~~~----~----~~-g~~Vlv~~~~~~~~-~~~~~~~~~---- 115 (386)
+.| ..+|.+.|+++.. .+.++++.||++|+...+.+ . +| ..+++.-..+|++. ...+ ++..
T Consensus 86 ~~P-a~~LA~~L~~~aP~~~l~~vFf~~sGSeAvEtAlKma~qY~~~~G~p~r~~~Isr~~gYHG~T~ga~-Sv~g~~~~ 163 (449)
T COG0161 86 HEP-AIELAEKLAELAPEGGLDHVFFTDSGSEAVETALKMALQYWRARGQPQRKKFISRRNGYHGDTLGAM-SVGGPVAL 163 (449)
T ss_pred Cch-HHHHHHHHHHhCCCCCccEEEEeCCchHHHHHHHHHHHHHHHhcCCCcceEEEEeccCcCcccchhe-eccCchhh
Confidence 445 7778888888876 34678888999998643321 1 23 23477777777554 2111 1111
Q ss_pred ------cCCcEEEEeCCC-----------C------HHHHHhhhC----CCceEEEEeCCCCC-Cccccc----HHHHHH
Q 016612 116 ------KTGVVVKRVNTC-----------D------LDEVASAIG----PWTKLVWVESPTNP-RQQICD----IRKIAE 163 (386)
Q Consensus 116 ------~~g~~~~~v~~~-----------d------~~~l~~~~~----~~~~~v~~~~~~np-tG~~~~----l~~i~~ 163 (386)
..-..+.+++.. + .++|++.+. +++.+++++....- .|.+.| ++++.+
T Consensus 164 ~~~~~~~ll~~~~~~~~P~~y~~~~~~~~~~~~~~~a~~le~~i~~~g~~~IAAfI~EPv~g~agG~~~pp~~Yl~~vr~ 243 (449)
T COG0161 164 RHAFYDPLLPEVLHLPAPYAYRRGFFGEGDEEFAEAADELEALILEHGPETIAAFIVEPVVGGAGGMLVPPPGYLKRVRE 243 (449)
T ss_pred hhhhccccccCceecCCCcccccCCCCCChHHHHHHHHHHHHHHHhcCcccEEEEEecccccccCCcccCChHHHHHHHH
Confidence 011112222221 1 455666654 57889999988776 666654 899999
Q ss_pred HHHHcCCEEEEeCCCC-C---CCccCC--CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh-----hhhcC
Q 016612 164 MAHAHGALLLVDNSIM-S---PVLSRP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-----QNAEG 232 (386)
Q Consensus 164 la~~~~~~li~D~a~~-~---~~~~~~--~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-----~~~~~ 232 (386)
+|++||+++|.||+.. . |.+... ....+|+++ ++|.+.+. -+-.|.++++ +.+.+.+..- .....
T Consensus 244 iC~ky~ILlI~DEV~tGFGRTG~~FA~e~~gi~PDi~~--~aKGLT~G-Y~Pl~a~l~~-~~I~~~~~~~~~~~f~HG~T 319 (449)
T COG0161 244 ICDKYGILLIADEVATGFGRTGKMFACEHAGIVPDILC--LAKGLTGG-YLPLSAVLTS-DRIYEAFSDGDAGAFMHGHT 319 (449)
T ss_pred HHHHcCcEEEeecceeCCCcCchhhhhhhcCCCCCeee--eccccccc-chhhHhHhhh-HHHHHHHhcccCCeeccCCc
Confidence 9999999999999954 2 222211 224568886 58988642 2345555555 4455544321 11222
Q ss_pred CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC----
Q 016612 233 SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---- 308 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---- 308 (386)
-.-.+..+++++..++.+. .+.+.++.+.+..++.+.-. +.+.++|. ..+.++.|.+..+++-.
T Consensus 320 YsghPlacAaAla~L~i~e--~e~l~~~~~~~~~~l~~~L~------~~l~~~p~----VgdVR~~Gli~~iElv~d~~t 387 (449)
T COG0161 320 YSGNPLACAAALANLDILE--EEDLLERVAEIGAYLQAGLQ------AALADHPL----VGDVRGLGLIGAIELVADKAT 387 (449)
T ss_pred cccCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHH------HhcccCCc----EEEeeccceEEEEEEeccccc
Confidence 3456667777666665332 24455555555555554210 00222211 12336677778887621
Q ss_pred -----HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 309 -----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 309 -----~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.....++.+.+.++|+.+++.+....+.+| ++++.++++++++.+.++++.
T Consensus 388 ~~~f~~~~~~~~~~~~~e~Gl~iRp~g~~i~~~PP------------------------liit~~eid~l~~~l~~al~~ 443 (449)
T COG0161 388 KTPFEARVGARVRAAALERGLLIRPLGDVIYLMPP------------------------LIITREEIDELVDALREALDE 443 (449)
T ss_pred ccchhhhHHHHHHHHHHHCCeEEeecCCEEEEcCC------------------------ccCCHHHHHHHHHHHHHHHHH
Confidence 233678888888999998876544444445 456779999999999999975
Q ss_pred C
Q 016612 384 G 384 (386)
Q Consensus 384 ~ 384 (386)
.
T Consensus 444 ~ 444 (449)
T COG0161 444 T 444 (449)
T ss_pred H
Confidence 4
No 358
>COG0403 GcvP Glycine cleavage system protein P (pyridoxal-binding), N-terminal domain [Amino acid transport and metabolism]
Probab=99.43 E-value=1.1e-10 Score=104.77 Aligned_cols=198 Identities=26% Similarity=0.310 Sum_probs=144.9
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CC--c----hHHHHHHHHHhhcCCC--ceEEeCcHHHH
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN--P----TRDALESLLAKLDKAD--RALCFTSGMAA 82 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~--~----~~~~l~~~l~~~~g~~--~~i~~~~gt~a 82 (386)
...++= +.+|++-.-|++.....+..+ +-...|.++ .. . ..-+....+++++|.+ +.-..-.+|++
T Consensus 75 ~~~sfi-G~GyY~~~~P~vI~rnile~p----ewyTaYTPYQpEISQGrLqaLfefQtlv~dLTGm~VANASm~DeaTAa 149 (450)
T COG0403 75 VFTSFI-GAGYYDTYTPPVILRNILENP----EWYTAYTPYQPEISQGRLEALFEFQTLVADLTGLDVANASMLDEATAA 149 (450)
T ss_pred hhhhhc-cCcccCCcCcHHHHHHhhcCc----cccccCCCCchhhhhHHHHHHHHHHHHHHHHhCCCcccchhhhhHHHH
Confidence 444454 677888877776663222222 233345554 21 1 2334567788999988 67777777755
Q ss_pred HH-HHHH--hcC-CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCc-cccc
Q 016612 83 LA-AVTH--LLG-TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQ-QICD 157 (386)
Q Consensus 83 l~-~~~~--~~~-~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG-~~~~ 157 (386)
-. ++++ .-+ +.++++|+...|+.+..+++-.++..|++++.++.+|.+++++..+.++..+++.+|+. .| ...+
T Consensus 150 AEAm~ma~r~~k~k~~~~~V~~~vhpqt~~Vl~Tra~~~g~~i~~~~~~d~~~l~~~~~~~~~gv~vQyP~~-~G~~~~d 228 (450)
T COG0403 150 AEAMLMAKRVTKKKRNKFLVPKDVHPQTLDVLRTRAEGLGIEIEVVDADDLDDLESADDGDVFGVLVQYPNT-FGIVEED 228 (450)
T ss_pred HHHHHHHHHhhcCcCceEEecCCCCHHHHHHHHhhcccCceEEEEeccchhhhhhhccccCeEEEEEecCCC-CCccchh
Confidence 43 3344 222 36899999999999999998899999999999999999999998335889999999986 56 5667
Q ss_pred HHHHHHHHHHcCCEEEEeC-CCCCCCccCCCCCCccEEEecccc-----ccccCCCceEEEEEEcCh
Q 016612 158 IRKIAEMAHAHGALLLVDN-SIMSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~-a~~~~~~~~~~~~~~di~~~S~sK-----~~~g~~g~~~G~i~~~~~ 218 (386)
+++|.+.+|++|.++++=. ..+.+.+..|.++|+||+++|.+- +|+||. .|++.++++
T Consensus 229 ~~~l~~~~h~~~al~~v~aDplaL~LL~pPGe~GADIvvG~~QrfGvPmgfGGPh---ag~fA~~~~ 292 (450)
T COG0403 229 LRALIEAAHSAGALVIVAADPLALGLLKPPGEFGADIVVGSAQRFGVPMGFGGPH---AGYFAVKDE 292 (450)
T ss_pred HHHHHHHHhhcCCEEEEEechhHhhccCCccccCCceEEecCcccCCCcCCCCcc---eeeeeEhHh
Confidence 9999999999998777632 235566777889999999999877 455554 799998854
No 359
>PRK06148 hypothetical protein; Provisional
Probab=99.43 E-value=9.2e-12 Score=129.23 Aligned_cols=290 Identities=20% Similarity=0.186 Sum_probs=169.2
Q ss_pred CCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHHHhhhc-----ccCC----
Q 016612 53 GNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVT-----PKTG---- 118 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~-----~~~g---- 118 (386)
.++...++.+.|.+.+.. +...+++||++|..+.+.+ ...+.+|++.+..|++.......+. +..+
T Consensus 661 ~~~~~~~lAe~L~~~~p~~~~~v~f~nSGsEA~e~AlklAr~~tGr~~ii~~~~~YHG~t~~a~s~s~~~~~~~~~~~~~ 740 (1013)
T PRK06148 661 LHDAIVAYAERLTATLPDGLTVAFFVNSGSEANSLALRLARAHTGQRDAIVLDHAYHGTTTELIDLSPYKFNRKGGKGRP 740 (1013)
T ss_pred CCHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHhcCCCeEEEEcCCccCCCcchhhcCchhhcccCCCCCC
Confidence 345666677777776643 4678889999998644332 2334567777777766521110100 0011
Q ss_pred cEEEEe--------CCC--C-------HHHHHhhhC------CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCE
Q 016612 119 VVVKRV--------NTC--D-------LDEVASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGAL 171 (386)
Q Consensus 119 ~~~~~v--------~~~--d-------~~~l~~~~~------~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~ 171 (386)
..+..+ +.. + .+++++.+. +++.+|+++......|.+.+ +++|.++|+++|++
T Consensus 741 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~iAAvI~EPv~g~gG~i~pp~~yl~~lr~lc~~~g~l 820 (1013)
T PRK06148 741 DHVEVAEVPDSYRGPERWPDAEHGRRFAESVAEQIAAMAAKGRGPAFFIAESIPSVAGQIFLPEGYLREVYAMVRAAGGV 820 (1013)
T ss_pred CCceEcCCCCccccCCCCChhhhHHHHHHHHHHHHHhhhccCCceEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHhCCE
Confidence 011111 111 1 133444432 46889999988877787765 99999999999999
Q ss_pred EEEeCCCC-CCCcc------CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh-hhcCCCCChhhHHHH
Q 016612 172 LLVDNSIM-SPVLS------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWIC 243 (386)
Q Consensus 172 li~D~a~~-~~~~~------~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 243 (386)
+|.||++. .|-.. ......+|+++ ++|.+++ |+.+|.++++ +++.+.+..-. .....+.++...++.
T Consensus 821 lI~DEVqtGfGRtG~~~~a~e~~gv~PDivt--~gK~lgg--G~Plgav~~~-~ei~~~~~~g~~~~~Tf~gnpla~aaa 895 (1013)
T PRK06148 821 CIADEVQVGFGRVGSHWWAFETQGVVPDIVT--MGKPIGN--GHPMGAVVTT-REIADSFDNGMEYFNTFGGNPVSCAIG 895 (1013)
T ss_pred EEEEecccCCCCCCCcchhhhhcCCCcceee--ecccccC--CcceEEEEEc-HHHHhhccCCCccccCCCCCHHHHHHH
Confidence 99999984 23222 11234578876 5999965 4568888886 55665443211 122334566666666
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--------HHhHHHH
Q 016612 244 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LALSKHV 315 (386)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~l 315 (386)
+..++.+.. +...++++.+.+++.+.-. . +. ..++. ..+.++.|.++.+.+.. ......+
T Consensus 896 ~a~L~~i~~--e~l~~~~~~~G~~l~~~L~--~-l~---~~~~~----i~~VrG~Gl~~gvel~~~~~~~~~~~~~~~~i 963 (1013)
T PRK06148 896 LAVLDIIED--EDLQRNALEIGNYLLAGLR--E-LQ---DRFDI----IGDVRGMGLFLGIELVTDRKTKAPATAIARYV 963 (1013)
T ss_pred HHHHHHHhh--ccHHHHHHHHHHHHHHHHH--H-HH---HhCCC----ceEEeeeceEEEEEecCCccccCccHHHHHHH
Confidence 665554422 3445555555555543210 0 00 01110 01236778888888731 2345678
Q ss_pred HhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 316 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+.+...|+.+...+. ..+.+|+.+. .++++++++.+.++|+++
T Consensus 964 ~~~~~~~Gvl~~~~g~-------------------------~~~vlr~~Ppl~it~~~id~~l~~l~~~l~~~ 1011 (1013)
T PRK06148 964 KNGARERGILIGTEGP-------------------------HDNVLKIRPPLIFSRADADHLLEVLDDVLAAA 1011 (1013)
T ss_pred HHHHHhCCeEEeccCC-------------------------CCCEEEEeCCccCCHHHHHHHHHHHHHHHHHH
Confidence 8888888887543211 1345788764 488888888998888764
No 360
>PRK07480 putative aminotransferase; Validated
Probab=99.40 E-value=5.2e-11 Score=113.60 Aligned_cols=284 Identities=16% Similarity=0.185 Sum_probs=159.0
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHh---c----C-C-CCEEEecCCCCCcHH-HHHhhhc------c
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHL---L----G-T-GEEIVAGDDLYGGTD-RLLSRVT------P 115 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~---~----~-~-g~~Vlv~~~~~~~~~-~~~~~~~------~ 115 (386)
++...++.+.|.+.++. +...+++||++|+.+.+.+ . . + ..+|+.-...|++.. ..+ .+. +
T Consensus 93 ~~~~~~lae~L~~~~p~~~~~v~f~~SGseA~e~AlklAr~~~~~~g~~~r~~ii~~~~~yHG~tl~a~-s~~g~~~~~~ 171 (456)
T PRK07480 93 HPPAIELAAKLAEVAPPGFNHVFFTNSGSEANDTVLRMVRHYWALKGKPQKKVIISRKNGYHGSTVAGA-SLGGMKYMHE 171 (456)
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCCcHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCcCCcchhhh-hccCChhhhc
Confidence 34566666777766643 4678889999998633321 1 1 2 346777666666642 111 110 0
Q ss_pred cCCc---EEEEeCCC---------C--------HHHHHhhh----CCCceEEEEeCCCCCCccccc----HHHHHHHHHH
Q 016612 116 KTGV---VVKRVNTC---------D--------LDEVASAI----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 116 ~~g~---~~~~v~~~---------d--------~~~l~~~~----~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 167 (386)
..+. .+..++.. + .+.+++.+ .+++.+|+++......|.+.+ +++|.++|++
T Consensus 172 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~vAAvi~EPiqg~gG~~~~~~~yl~~lr~lc~~ 251 (456)
T PRK07480 172 QGDLPIPGIVHIDQPYWFGEGGDMTPEEFGLAAARQLEAKILELGADNVAAFIGEPIQGAGGVIIPPATYWPEIQRICRK 251 (456)
T ss_pred ccCCCCCCCeecCCCcccccccCCChHHHHHHHHHHHHHHHHhcCCCcEEEEEEccccCCCCCccCCHHHHHHHHHHHHH
Confidence 1111 12222211 1 25555444 257889999988887787765 8999999999
Q ss_pred cCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCc-eEEEEEEcChhHHHHHHH----hhhhcCCCCC
Q 016612 168 HGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDV-MAGVLAVKGERLAKELYF----LQNAEGSGLA 236 (386)
Q Consensus 168 ~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~-~~G~i~~~~~~~~~~~~~----~~~~~~~~~~ 236 (386)
||+++|+||++. .|-.. ......+|+++ ++|.++| |+ .+|.++++ +++.+.+.. .......+.+
T Consensus 252 ~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~gK~l~g--G~~Pi~av~~~-~~i~~~~~~~~~~~~~~~T~~gn 326 (456)
T PRK07480 252 YDILLVADEVICGFGRTGEWFGSQHFGIKPDLMT--IAKGLTS--GYIPMGAVGVG-DRVAEVLIEEGGEFNHGFTYSGH 326 (456)
T ss_pred cCCEEEEechhhCCCcCcchhhhhhcCCCCCeee--eehhhcc--CCccceEEEEc-HHHHHHHhcCCCCcccCCCCCcC
Confidence 999999999984 32222 12234578875 5999865 32 36777766 556655421 1122233556
Q ss_pred hhhHHHHHhcCCcHHHHHHHHHHHH-HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH------
Q 016612 237 PFDCWICLRGVKTMALRVEKQQDNA-QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ 309 (386)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~------ 309 (386)
+...+++...++.+.. +...+++ +.+.+++.+.-. . +..++. ..+.++.|.++.+.+...
T Consensus 327 pl~~Aaa~a~L~~l~~--~~l~~~~~~~~g~~l~~~l~--~-----l~~~~~----i~~vrG~Glm~gie~~~~~~~~~~ 393 (456)
T PRK07480 327 PVAAAVALANLRILRD--EGIVERVRDDTGPYLQKRLR--E-----LADHPL----VGEVRGVGLVGAIELVKDKATRER 393 (456)
T ss_pred HHHHHHHHHHHHHHHh--CCHHHHHHHHHHHHHHHHHH--H-----hhcCCC----eeeEEeecceEEEEEecccccccc
Confidence 6666666666654322 2233444 244444332110 0 111110 112266788888887211
Q ss_pred -----HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHH
Q 016612 310 -----ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKA 380 (386)
Q Consensus 310 -----~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~ 380 (386)
.....+.+++..+|+.+... .+.+|+++. .++++++++.+.++
T Consensus 394 ~~~~~~~~~~~~~~~~~~Gll~~~~----------------------------~~~l~~~Ppl~it~~eid~~~~~l~~a 445 (456)
T PRK07480 394 FEAGGGVGTICRDHCFANGLIMRAV----------------------------GDRMIISPPLVITHAEIDELVEKARKA 445 (456)
T ss_pred CcchhhHHHHHHHHHHHCCcEEeec----------------------------CCEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 11245666666677754321 123777764 48888888888888
Q ss_pred HhcC
Q 016612 381 LRTG 384 (386)
Q Consensus 381 l~~~ 384 (386)
|+++
T Consensus 446 l~~~ 449 (456)
T PRK07480 446 LDAT 449 (456)
T ss_pred HHHH
Confidence 8653
No 361
>TIGR00461 gcvP glycine dehydrogenase (decarboxylating). This apparently ubiquitous enzyme is found in bacterial, mammalian and plant sources. The enzyme catalyzes the reaction: GLYCINE + LIPOYLPROTEIN = S-AMINOMETHYL-DIHYDROLIPOYLPROTEIN + CO2. It is part of the glycine decarboxylase multienzyme complex (GDC) consisting of four proteins P, H, L and T. Active site in E.coli is located as the (K) residues at position 713 of the SEED alignment.
Probab=99.40 E-value=3e-11 Score=121.38 Aligned_cols=154 Identities=24% Similarity=0.336 Sum_probs=118.4
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHh-c--CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCH
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHL-L--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDL 129 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~-~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~ 129 (386)
..-+++..+++++|.+ +.-+...+|++..+ +++. . +++++|+|++..|+.+..+++..++..|++++.++.
T Consensus 110 ~l~e~Qt~i~eLtGm~~aNaSl~d~atA~aEa~~~a~~~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~v~~~~~--- 186 (939)
T TIGR00461 110 ALLNFQTVVSDLTGLPVANASLLDEGTAAAEAMALSFNVSKKKANKFFVAKDLHPQTKSVLHTRAKPFGIEVIVVDC--- 186 (939)
T ss_pred HHHHHHHHHHHHHCCChhhhhccchhhHHHHHHHHHHHhhcCCCCEEEECCCCCcchHHHHHHHHHhcCcEEEEEcH---
Confidence 3556788899999998 56777777765543 3342 2 234899999999999988887778899999988854
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC-CCCccCCCCCCccEEEecccccc-----c
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-SPVLSRPLELGADIVMHSATKFI-----A 203 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~-~~~~~~~~~~~~di~~~S~sK~~-----~ 203 (386)
+++++.+ ++.++++.+|++ .|.+.|+++|.+++|++|.+++++.-.. ...+..|.++|+||++++..++. +
T Consensus 187 ~~l~~~~--~~~~v~~q~Pn~-~G~ied~~~i~~~~h~~gal~~~~ad~~al~ll~~Pge~GaDi~vg~~q~fg~p~g~G 263 (939)
T TIGR00461 187 SDIKKAV--DVFGCLLQYPAT-DGSILDYKQLIDALHSHKSLVSVAADLMALTLLTPPGHYGADIVLGSSQRFGVPMGYG 263 (939)
T ss_pred HHHhhcC--CEEEEEEECCCC-CeEEecHHHHHHHHHHcCCEEEEEechHHhCCcCCHHHcCCcEEeeCCCccCCCCCCC
Confidence 5566555 577888888876 7999999999999999999999966543 34566788899999998876643 3
Q ss_pred cCCCceEEEEEEcCh
Q 016612 204 GHSDVMAGVLAVKGE 218 (386)
Q Consensus 204 g~~g~~~G~i~~~~~ 218 (386)
||. .|++.++++
T Consensus 264 GP~---aG~~a~~~~ 275 (939)
T TIGR00461 264 GPH---AAFFAVKDE 275 (939)
T ss_pred CCc---eeeeeecHh
Confidence 543 799998754
No 362
>COG1982 LdcC Arginine/lysine/ornithine decarboxylases [Amino acid transport and metabolism]
Probab=99.39 E-value=3.9e-11 Score=112.93 Aligned_cols=155 Identities=25% Similarity=0.318 Sum_probs=121.0
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...+.++..++.+|++...++.+|| .|+. .+++++++||.||+++++|-+..+. .-..|+..++..+.
T Consensus 71 ~i~eAqe~aA~~fgAd~tyFvvNGTS~ank~vi~a~~~~GD~VLvdRN~HKSi~~g----lilaGa~Pvyl~p~~np~~g 146 (557)
T COG1982 71 PIKEAQELAARVFGADHTYFVVNGTSTANKAVINAVLTPGDKVLVDRNCHKSIHHG----LILAGATPVYLEPSRNPLYG 146 (557)
T ss_pred cHHHHHHHHHHHhCCCceEEEECCccHHHHHHHHhhcCCCCEEEecCCccHHHHHH----HHHcCCceEEecCCCCcccc
Confidence 5788999999999999777777777 6664 6788999999999999999887643 23567777666542
Q ss_pred -----CHHHHHhhhC--CCc-eEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCC-----CccC-CCCCCccE
Q 016612 128 -----DLDEVASAIG--PWT-KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSP-----VLSR-PLELGADI 193 (386)
Q Consensus 128 -----d~~~l~~~~~--~~~-~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~-----~~~~-~~~~~~di 193 (386)
+.+.+.+.+. +.. +++++++|+. .|.+.++++|.+.++..++++.+|+++..- ..+. ....++|+
T Consensus 147 i~ggI~~~~~~~~l~~~~~~~k~~vitnpTY-dGv~~n~~~i~~~~~~~~a~v~~deah~~~~~~~~~l~~~~~~~~~~~ 225 (557)
T COG1982 147 IIGGIPLETFKEALLAHPDAEKLAVITNPTY-DGVCYNLRKIVELLHHYGAWVLYDEAHPAHFDFSPMLPESALNGGADF 225 (557)
T ss_pred ccCCCCHHHHHHHHHhChhhheeEEEecCcc-ceEeecHHHHHHHHhhcCceEEhhhcCcccccccccCcchhhhcCceE
Confidence 6777877654 334 7888899888 699999999999999999999999997632 2222 22357899
Q ss_pred EEeccccccccCCCceEEEEEEcC
Q 016612 194 VMHSATKFIAGHSDVMAGVLAVKG 217 (386)
Q Consensus 194 ~~~S~sK~~~g~~g~~~G~i~~~~ 217 (386)
++.|.||.+++.+ .+..+..++
T Consensus 226 ~tqS~HK~l~alS--QaS~iHv~~ 247 (557)
T COG1982 226 VTQSTHKLLAALS--QASMIHVKD 247 (557)
T ss_pred EEechhhhhhhhh--hhHHHhhCC
Confidence 9999999997655 467777764
No 363
>KOG1358 consensus Serine palmitoyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=99.39 E-value=4.9e-12 Score=111.64 Aligned_cols=179 Identities=17% Similarity=0.201 Sum_probs=130.7
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHh
Q 016612 56 TRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVAS 134 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ 134 (386)
..-.+++.+++++|.++.++.+-|.+++. ++.++.++||.+.+.+....+.. .-.+...-.+.++..+|.++++.
T Consensus 140 vHldlE~~iakF~G~E~aivYs~gF~ti~S~ipafsKrGDIi~~de~~nfaIq----~GlqlSRS~i~~Fkhndm~~ler 215 (467)
T KOG1358|consen 140 VHLDLEKRIAKFMGTEDAIVYSYGFSTIESAIPAFSKRGDIIFVDEAVNFAIQ----KGLQLSRSTISYFKHNDMEDLER 215 (467)
T ss_pred eecccHHHHHHhhCCcceeeeccccchhhhcchhhhccCcEEEEehhhhHHHH----HHHhhhhheeEEecCCCHHHHHH
Confidence 46678999999999999999999998886 78889999999998776665553 44445556777888888888887
Q ss_pred hhCCCc-------------eEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCC----------CCCc
Q 016612 135 AIGPWT-------------KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL----------ELGA 191 (386)
Q Consensus 135 ~~~~~~-------------~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~----------~~~~ 191 (386)
.+.+++ +.|+++....++|.+.|+.+|.++..+|...+|+|+.++.|.+.... ....
T Consensus 216 ll~E~~~~~~K~~k~~~~Rrfiv~EGl~~N~g~i~pl~~iv~lk~Kyk~RvildEs~SfG~lg~~GrGvteH~~v~~~~i 295 (467)
T KOG1358|consen 216 LLPEQEDEDQKNPKKALTRRFIVVEGLYANTGDICPLPEIVKLKNKYKFRVILDESLSFGVLGKTGRGVTEHFGVPITDI 295 (467)
T ss_pred hccCcchhhhhccccccceEEEEEEeeccCCCcccccHHHHHHHhhheEEEEEecccccccccccCccccccCCCCccce
Confidence 765332 46677888888999999999999999999999999999877654211 1246
Q ss_pred cEEEeccccccccCCCceEEEEEEcChhH-HHHHHHhhhhcCCCCChhhHHH
Q 016612 192 DIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 192 di~~~S~sK~~~g~~g~~~G~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
|++++|+.-.++.. +|+.+++.--+ .+.+....+.+...+.+..+.+
T Consensus 296 Div~~sm~~alas~----GgFc~G~~~i~~hQrLSg~~Y~fSAslPp~la~a 343 (467)
T KOG1358|consen 296 DIVTASMETALASG----GGFCAGKSFIADHQRLSGSGYCFSASLPPYLAGA 343 (467)
T ss_pred eeeeeccccccccc----CceeecceeeEeeeeccccceeeeccCchhhhhh
Confidence 89999999888542 58887753211 2333333333344455544443
No 364
>PRK12462 phosphoserine aminotransferase; Provisional
Probab=99.37 E-value=2.4e-10 Score=104.45 Aligned_cols=275 Identities=12% Similarity=0.017 Sum_probs=168.8
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCc-HHHHHH-HHHHhcCCCCEEE-ecCCCCCcHHHHHhhhcccCCcEEEEeCC---
Q 016612 56 TRDALESLLAKLDKAD---RALCFTS-GMAALA-AVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNT--- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~-gt~al~-~~~~~~~~g~~Vl-v~~~~~~~~~~~~~~~~~~~g~~~~~v~~--- 126 (386)
+.+++++.+.++++.+ +.+++.+ ||.++. +++.++.+||+++ +...++.+.. |...++++| ++..+..
T Consensus 50 i~~~~~~~Lr~Ll~~P~~y~Vlfl~GggT~~~ea~~~Nll~~g~~~~~~~~tG~fg~r--~~~ea~~~g-~v~~~~~~~~ 126 (364)
T PRK12462 50 LLAQAEADLRDLLGIPDEYGVVFLQGGSSLQFSMIPMNFSRPGAAAPEYVTTGYWSRK--AIGEASRVA-AMRVVWDGAA 126 (364)
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEeccHHHHHHHHHHHcCCCCCcEEEEEeCCHHHHH--HHHHHHhcC-CceEecCcCC
Confidence 5788899999999874 3444444 567787 4566889999665 4444544442 245666666 3333321
Q ss_pred ------CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccc
Q 016612 127 ------CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSAT 199 (386)
Q Consensus 127 ------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~s 199 (386)
.+++++ .++++.+.|.+++-...+|...| ++.+.++.++|+|.+.+.+..+ +..+ .|+++.+..
T Consensus 127 ~~~~~~p~~~~~--~~~~d~~~v~~t~NETstGv~~~-----~~~~~~~~llvvD~sS~~~s~pid~~~--~dvi~agsQ 197 (364)
T PRK12462 127 SGYRTLPSLAEL--DWDARAPFRHYVSNETVEGLQFP-----DAAGLPDSPLIADMSSDFMSRPFDVEA--YGMVYAHAQ 197 (364)
T ss_pred CCCCcCCCHHHh--ccCCCCcEEEEccCCCCceEecC-----cccccCCCeEEEEcCchhhCCCCChHH--ccEEEeecc
Confidence 134444 23456788988988889999986 3333468999999998765543 2222 399999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHH----------hhhhcCCCCCh-hhHHHHHhcC-----C--cHHHHHHHHHHHH
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYF----------LQNAEGSGLAP-FDCWICLRGV-----K--TMALRVEKQQDNA 261 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~----------~~~~~~~~~~~-~~~~~~~~~~-----~--~~~~~~~~~~~~~ 261 (386)
|.++ |+| .++++.+++.+.+.... .......+.++ ...+++...+ + .+..+.++..+.+
T Consensus 198 Knlg-P~G--ltvvivs~~al~~~~~~~p~~ldy~~~~~~~s~~nTPpv~~iy~l~~~l~~i~~e~GGl~~~~~r~~~ka 274 (364)
T PRK12462 198 KNLG-PAG--VTVAIIRRALLERVPDTLPPMLDFRTHVEHRSNYNTPPVFAIYVMALVLRWIRDEIGGVHAMRDINARKA 274 (364)
T ss_pred ccCC-CCc--eEEEEECHHHHhhccccCCchhhHHHHHhcCCCCCCchHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHH
Confidence 9995 888 58888886654321110 01111111222 2222222221 1 3455566667777
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
+.+.+++++... ++..... +..++. --++|.+.++...++|+++++.+|+..--|+.
T Consensus 275 ~~ly~~id~~~~---~~~~~~~---------~~~RS~-mnv~f~~~~~~l~~~f~~~a~~~gl~~lkGhr---------- 331 (364)
T PRK12462 275 AMLYATLDALNE---VIDCHAH---------RAARST-MNVAFRFRQPRLDTLFKEQSTEAGFCGLSGHR---------- 331 (364)
T ss_pred HHHHHHHHhCCC---cccCCCC---------hhhcCc-ceEEEEcCCHHHHHHHHHHHHHCCCccccCCc----------
Confidence 788888877642 1111110 011221 23567778888899999999999997655553
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhc
Q 016612 342 SHASIPVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~ 383 (386)
.-|.+|+|+ ..+.++.+++.+++.-++
T Consensus 332 ---------------~vgg~Ras~yna~~~e~v~~L~~fm~~f~~~ 362 (364)
T PRK12462 332 ---------------SIGGIRASLYNAVSEQAVSRLCAFLKDFAIR 362 (364)
T ss_pred ---------------ccCceEEEcCCCCCHHHHHHHHHHHHHHHHh
Confidence 124499998 458888888888776543
No 365
>TIGR02617 tnaA_trp_ase tryptophanase, leader peptide-associated. Members of this family belong to the beta-eliminating lyase family (pfam01212) and act as tryptophanase (L-tryptophan indole-lyase). The tryptophanases of this family, as a rule, are found with a tryptophanase leader peptide (TnaC) encoded upstream. Both tryptophanases (4.1.99.1) and tyrosine phenol-lyases (EC 4.1.99.2) are found between trusted and noise cutoffs, but this model captures nearly all tryptophanases for which the leader peptide gene tnaC can be found upstream.
Probab=99.36 E-value=6.9e-11 Score=108.60 Aligned_cols=305 Identities=13% Similarity=0.063 Sum_probs=174.0
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcC-CCCEEEecCC-------CCCcHHHHHhhhcccCCcEEEE
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLG-TGEEIVAGDD-------LYGGTDRLLSRVTPKTGVVVKR 123 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~-~g~~Vlv~~~-------~~~~~~~~~~~~~~~~g~~~~~ 123 (386)
++|...++++.+++++|.+..+.+.+|+.+-. +...+++ ||+++.+..+ .|..+. ...+...|+..+.
T Consensus 72 gdpSv~~Lee~vael~G~E~alpthqGRgaE~Il~~~~~~~~g~e~g~~~~~~~v~hn~~fett---~g~a~l~G~~~~~ 148 (467)
T TIGR02617 72 GSRSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFSNYFFDTT---QGHSQINGCTARN 148 (467)
T ss_pred cCchHHHHHHHHHHHhCCceEEECCCCchHHHHHHHhhcccccccccccccccccceEEEEecc---hHHHHHcCceeec
Confidence 56788999999999999999999999986655 4445667 6777664433 222211 1234456655544
Q ss_pred eC---------------CCCHHHHHhhhCC----CceEEEEeCCCCCCcc-ccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 124 VN---------------TCDLDEVASAIGP----WTKLVWVESPTNPRQQ-ICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 124 v~---------------~~d~~~l~~~~~~----~~~~v~~~~~~nptG~-~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
+. ..|++++++.+.+ +...+.++-.+|..|. +.+ ++++.++|++||+.++.|.+-..
T Consensus 149 l~~~ea~~~~~~~~fkG~~dl~~le~~I~~~g~~~i~~v~~tlt~N~~GGqpvslenlr~V~~la~~~GIplhLDgARl~ 228 (467)
T TIGR02617 149 VYTKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITCNSAGGQPVSLANLKAVYEIAKKYDIPVVMDSARFA 228 (467)
T ss_pred ccchhhcccccCCCCCCCcCHHHHHHHHhhcCCCCceeeeeeEEEecCCCEEeCHHHHHHHHHHHHHcCCcEEEEhHHHH
Confidence 31 1289999999873 4455555544565444 444 78999999999999999998422
Q ss_pred -----------CCccCC-C------CCCccEEEeccccccccCCCceEEEEEEcCh---hHHHHHHHhhhhc-----CCC
Q 016612 181 -----------PVLSRP-L------ELGADIVMHSATKFIAGHSDVMAGVLAVKGE---RLAKELYFLQNAE-----GSG 234 (386)
Q Consensus 181 -----------~~~~~~-~------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~---~~~~~~~~~~~~~-----~~~ 234 (386)
+....+ . ...+|.+.+|++|.++.|- +|+++++++ ++.++.+...... -.+
T Consensus 229 nNA~fIk~rE~~a~~~si~eI~rE~~~~aDsvt~slsKglgApv---Gg~Lag~d~~~~~l~~~~~~~~i~~EGf~tYGG 305 (467)
T TIGR02617 229 ENAYFIKQREAEYKNWSIEQITRETYKYADMLAMSAKKDAMVPM---GGLLCFKDDSFFDVYTECRTLCVVQEGFPTYGG 305 (467)
T ss_pred HHhhhhhhcchhhcCCCHHHHHHHhhccCCEEEEEcCCCCCCcc---cceEEecchhHHHHHHHHHhhcccccCCcCcCc
Confidence 111111 1 1468999999999997764 699999988 4444433322211 124
Q ss_pred CChhhHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhH
Q 016612 235 LAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 312 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 312 (386)
++.-...++..++... ...+.......+.|.+.|.+..- |-.. ..|+-++.+..+-...+-.-.++....+
T Consensus 306 lagrd~ea~a~Gl~e~~~~~yl~~ri~qv~yl~~~L~~~Gv------pi~~-~Gghav~iDa~~~lphip~~~fpa~al~ 378 (467)
T TIGR02617 306 LEGGAMERLAVGLYDGMNLDWLAYRINQVQYLVNGLEEIGV------VCQQ-AGGHAAFVDAGKLLPHIPADQFPAHALA 378 (467)
T ss_pred hhHHHHHHHHhhhhhcccHHHHHHHHHHHHHHHHHHHhCCC------cEEe-cCccEEEEehhhhCCCCChhhCcHHHHH
Confidence 4444444444444321 33444555666777777776531 1111 2233332211000000011123445667
Q ss_pred HHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHHHHhc
Q 016612 313 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 313 ~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~~l~~ 383 (386)
.+++.+.+++++-...-.. -.-|-.... . ...-.++|+.+. ..+++...+.+....++
T Consensus 379 ~~ly~~~GiR~~e~G~~~~---~rd~~~~~~--~--------~~~~el~RlaipRrvyt~~h~d~v~~~~~~~~~~ 441 (467)
T TIGR02617 379 CELYKVAGIRAVEIGSLLL---GRDPKTGKQ--L--------PCPAELLRLTIPRATYTQTHMDFIIEAFKHVKEN 441 (467)
T ss_pred HHHHHHcCcceEeecceec---ccCCCCCcc--C--------CCccceeeeccccccccHhHHHHHHHHHHHHHhh
Confidence 7788887777654221000 000111000 0 001367999985 48888888888777654
No 366
>PRK08297 L-lysine aminotransferase; Provisional
Probab=99.35 E-value=1.5e-10 Score=110.15 Aligned_cols=317 Identities=16% Similarity=0.128 Sum_probs=171.0
Q ss_pred CCCCCCcccceee--eeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC---CCceEEeCcHHHHHHHHHHhc----
Q 016612 20 FDPYGALSTPLYQ--TATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTHLL---- 90 (386)
Q Consensus 20 ~~~~g~~~~~~~~--~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~~~~~~---- 90 (386)
...+|..+|.+.+ +......++..... .......+...++.+.+.++.+ .+...+++||++|+.+.+.+.
T Consensus 56 ~~~lGh~~p~v~~~~ai~~ql~~l~~~~~-~~~~~~~~~~~~la~~l~~~~~p~~~~~v~f~~SGsEAve~AlKlAr~~~ 134 (443)
T PRK08297 56 SSALGMNHPALADDPEFRAELGRAALNKP-SNSDVYTVEMARFVDTFARVLGDPELPHLFFVDGGALAVENALKVAFDWK 134 (443)
T ss_pred hhcCCCCChHHhhHHHHHHHHHHhhhhcc-ccCCcCCHHHHHHHHHHHhhcCCCCCCEEEEeCchHHHHHHHHHHHHHHh
Confidence 4457888888776 32211111100000 0011123456667777777662 246888999999986443322
Q ss_pred -----CC------CCEEEecCCCCCcHHHHHhhhccc-------CC------cEEEEe--CC-------------CCHHH
Q 016612 91 -----GT------GEEIVAGDDLYGGTDRLLSRVTPK-------TG------VVVKRV--NT-------------CDLDE 131 (386)
Q Consensus 91 -----~~------g~~Vlv~~~~~~~~~~~~~~~~~~-------~g------~~~~~v--~~-------------~d~~~ 131 (386)
.. ..+|+.-..+|++........... .. +....+ +. .++++
T Consensus 135 ~~~~~~~g~~~~~r~kii~~~~~yHG~t~~als~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (443)
T PRK08297 135 SRKNEARGIDPALGTKVLHLRGAFHGRSGYTLSLTNTDPRKTARFPKFDWPRIDNPKLRFPLPGEDLEEVEALEAEALAQ 214 (443)
T ss_pred hccccccCCCCCCCceEEEECCCcCCcchhhhhhcCCcccccccCCCCCccccCCCCCCCCCcccccchhhHHHHHHHHH
Confidence 01 256887777776653221111100 00 000001 10 02344
Q ss_pred HHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc-----CCCCCCccEEEecc
Q 016612 132 VASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSA 198 (386)
Q Consensus 132 l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~ 198 (386)
+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++. .+... ......+|+++ +
T Consensus 215 ~~~~i~~~~~~iAavI~EPi~g~~G~~~pp~~yl~~lr~lc~~~g~llI~DEV~tGfGRtG~~~a~~~~gv~PDiv~--~ 292 (443)
T PRK08297 215 ARAAFERHPHDIACFIAEPIQGEGGDNHFRPEFFAAMRELCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVRPDIVA--F 292 (443)
T ss_pred HHHHHHhCCCcEEEEEEccccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEechhhccCccchHHHHHhcCCCCCEEE--e
Confidence 555553 67899999988887787743 8999999999999999999985 23222 11234678886 5
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHH-Hh----hhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCC
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELY-FL----QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
+|.+ +. +|++.++ + +..... .. ......+.++....+....++.+.. +...++.+.+.+++.+.-.
T Consensus 293 gK~l-~~----~a~l~~~-~-i~~~~~~~~~~~~~~~~T~~gnpl~~aaa~a~L~~l~~--~~l~~~~~~~g~~l~~~L~ 363 (443)
T PRK08297 293 GKKT-QV----CGIMAGR-R-VDEVEDNVFAVSSRINSTWGGNLVDMVRARRILEVIEE--DGLVENAARQGEYLLARLE 363 (443)
T ss_pred cccc-cc----cceecch-H-HHHhhhhhccCccccCCCCCccHHHHHHHHHHHHHHHh--cCHHHHHHHHHHHHHHHHH
Confidence 9987 22 4555543 2 322111 11 1122224556666655555543322 2333444444444432110
Q ss_pred cceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
. + ...++.. ..+.++.|.++.+.+.+......+.+.+..+|+.+.+++
T Consensus 364 --~-l---~~~~~~~---~~~vrg~G~~~~i~~~~~~~~~~~~~~l~~~Gvl~~~~~----------------------- 411 (443)
T PRK08297 364 --E-L---AAEFPAV---VSNVRGRGLMCAFDLPTTADRDEVIRRLWEEGVLVLPCG----------------------- 411 (443)
T ss_pred --H-H---HHHCCCc---ceeeeccceEEEEEecCHHHHHHHHHHHHHCCEEEecCC-----------------------
Confidence 0 0 0001100 012256789999999766666778888888888654322
Q ss_pred cCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 354 RGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 354 ~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
...+|++++ .++++++++.+.++++++
T Consensus 412 ----~~~lr~~P~l~~t~~eid~~l~~l~~~l~~~ 442 (443)
T PRK08297 412 ----ERSIRFRPALTVTTEEIDAAIDALRRALPEV 442 (443)
T ss_pred ----CCeEEEECCccCCHHHHHHHHHHHHHHHHhh
Confidence 123788654 478888888888887653
No 367
>TIGR03251 LAT_fam L-lysine 6-transaminase. Characterized members of this protein family are L-lysine 6-transaminase, also called lysine epsilon-aminotransferase (LAT). The immediate product of the reaction of this enzyme on lysine, 2-aminoadipate 6-semialdehyde, becomes 1-piperideine 6-carboxylate, or P6C. This product may be converted subsequently to pipecolate or alpha-aminoadipate, lysine catabolites that may be precursors of certain seconary metabolites.
Probab=99.34 E-value=4e-10 Score=107.13 Aligned_cols=281 Identities=15% Similarity=0.110 Sum_probs=155.7
Q ss_pred CchHHHHHHHHHhhcC---CCceEEeCcHHHHHHHHHHhc---C------C------CCEEEecCCCCCcHHHHHhhhcc
Q 016612 54 NPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTHLL---G------T------GEEIVAGDDLYGGTDRLLSRVTP 115 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~~~~~~---~------~------g~~Vlv~~~~~~~~~~~~~~~~~ 115 (386)
.+...++.+.++++.+ .+...+++||++|+.+.+.+. . . +.+|+.-+..|++..........
T Consensus 84 ~~~~~~l~~~l~~~~~~~~~~~v~f~~sGsEAve~AlklAr~~t~~~~~~~g~~~~~~~~ii~~~~~yHG~t~~als~~~ 163 (431)
T TIGR03251 84 TVAMARFVDTFARVLGDPALPHLFFIEGGALAVENALKTAFDWKSRHNQARGIPAALGTQVLHLRQAFHGRSGYTLSLTN 163 (431)
T ss_pred CHHHHHHHHHHHHhcCCCCcCEEEEeCCcHHHHHHHHHHHHHHhhcchhhcCCCCCCCceEEEECCccCCcchhhhhccC
Confidence 3455666666776642 346788899999986433321 1 1 36788777777665322111111
Q ss_pred cCCc-----EE---EE--e-----CC-------------CCHHHHHhhh---CCCceEEEEeCCCCCCccccc----HHH
Q 016612 116 KTGV-----VV---KR--V-----NT-------------CDLDEVASAI---GPWTKLVWVESPTNPRQQICD----IRK 160 (386)
Q Consensus 116 ~~g~-----~~---~~--v-----~~-------------~d~~~l~~~~---~~~~~~v~~~~~~nptG~~~~----l~~ 160 (386)
.... .. .. . +. .+++++++.+ .+++.+|+++......|.+.+ +++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iAavivEPv~g~~G~~~~~~~~l~~ 243 (431)
T TIGR03251 164 TDPRKTARFPKFDWPRIDNPKLTFPLDAPNLDQVIALEEEALRQARAAFAERPHDIACFIAEPIQGEGGDNHFRPEFLRA 243 (431)
T ss_pred CccccccCCCCCCCccCCCCcccCCccccccchhhHHHHHHHHHHHHHHHhCCCcEEEEEEeccccCCCCcCCCHHHHHH
Confidence 0000 00 00 0 00 1234445555 368999999999888887753 899
Q ss_pred HHHHHHHcCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHH-Hh----hh
Q 016612 161 IAEMAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-FL----QN 229 (386)
Q Consensus 161 i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~-~~----~~ 229 (386)
|.++|++||+++|+||+++ .+... ......+|+++ ++|.+ +. +|++... + +.+... .. ..
T Consensus 244 l~~lc~~~g~llI~DEV~tG~GrtG~~~a~~~~gv~PDi~~--~gK~~--~~---~g~~~~~-~-i~~~~~~~~~~~~~~ 314 (431)
T TIGR03251 244 MRALCDEHDALLIFDEVQTGVGLTGTAWAYQQLGVQPDIVA--FGKKT--QV---CGIMAGR-R-VDEVADNVFAVPSRL 314 (431)
T ss_pred HHHHHHHcCCEEEEecchhccCccchHHHHHhcCCCCCEEE--ecccC--cc---ceEEecc-h-HHHhhhhcccCcccc
Confidence 9999999999999999986 23221 12234678886 58876 21 4666543 2 222111 01 11
Q ss_pred hcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC
Q 016612 230 AEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG 307 (386)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~ 307 (386)
....+.++...++....++.+.. ..+...+..+.+.+.|++.. ...+++ ..+.++.|.++.+.+.
T Consensus 315 ~~T~~gnpl~~aaa~a~L~~l~~~~l~~~~~~~g~~l~~~L~~l~----------~~~~~~---i~~vrg~G~~~~i~~~ 381 (431)
T TIGR03251 315 NSTWGGNLVDMVRATRILEIIEEERLVDNARVQGAHLLARLHELA----------AEFPHL---VSNPRGRGLMCAFDLP 381 (431)
T ss_pred CCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHH----------HhCccc---eecccccceeEEEEeC
Confidence 11223455555555555543321 11233333344444443311 000100 0122567888899887
Q ss_pred CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 308 SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 308 ~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
+......+.+.+..+|+.+.+.+ .+.+|++++....++.++.+.++|++
T Consensus 382 ~~~~~~~~~~~l~~~Gvl~~~~g---------------------------~~~lr~~P~l~~t~~eid~~l~~l~~ 430 (431)
T TIGR03251 382 STADRDEVIRQLYREGVLLLGCG---------------------------ERSIRFRPPLTVTREEIDAAIDAIRR 430 (431)
T ss_pred CHHHHHHHHHHHHhCCeEEecCC---------------------------CCeEEEECCccCCHHHHHHHHHHHHh
Confidence 66666778888888888654321 23489998877777777776666654
No 368
>PF02347 GDC-P: Glycine cleavage system P-protein; InterPro: IPR020580 This family consists of glycine cleavage system P-proteins (1.4.4.2 from EC) from bacterial, mammalian and plant sources. The P protein is part of the glycine decarboxylase multienzyme complex (2.1.2.10 from EC (GDC) also annotated as glycine cleavage system or glycine synthase. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor, carbon dioxide is released and the remaining methylamin moiety is then transferred to the lipoamide cofactor of the H protein. GDC consists of four proteins P, H, L and T []. The reaction catalysed by this protein is: Glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + CO2 ; GO: 0004375 glycine dehydrogenase (decarboxylating) activity, 0055114 oxidation-reduction process; PDB: 1WYV_A 1WYT_C 1WYU_A.
Probab=99.32 E-value=1.1e-09 Score=101.36 Aligned_cols=157 Identities=24% Similarity=0.271 Sum_probs=104.4
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHH--h-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCH
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTH--L-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDL 129 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~--~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~ 129 (386)
..-+++..+++++|.| +.-+..+++++-. ++++ . -+++++|++++..|+.+...++..+...|++++.++.++-
T Consensus 111 ~lfe~Qs~i~eLTGmdvaNaSlyd~atA~aEa~~ma~r~~~~~~~~vlv~~~~hP~~~~v~~t~a~~~g~~iv~~~~~~~ 190 (429)
T PF02347_consen 111 ALFEYQSMICELTGMDVANASLYDGATAAAEAMLMAVRATKRKRNKVLVPESLHPQTRAVLRTYAAPLGIEIVEVPLDED 190 (429)
T ss_dssp HHHHHHHHHHHHHTSSEE-SEBSSCCHHHHHHHHHHHHHHTT---EEEEETTS-CHHHHHHHHHCCHCCEEEEEE-BBTT
T ss_pred HHHHHHHHHHHhhCCCccCCCCCChhHHHHHHHHHHHHhcccCCcEEEEcCCcChhhHHHHHHhhhhCCeEEEEeccccc
Confidence 4667889999999998 3455555553332 2232 2 2334699999999999988888889999999999986521
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCC--CCCCccCCCCCCccEEEeccccccccC--
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI--MSPVLSRPLELGADIVMHSATKFIAGH-- 205 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~--~~~~~~~~~~~~~di~~~S~sK~~~g~-- 205 (386)
.... ++++.+|++.+|++ .|.+.++++|.+++|++|.++++ .+- +.+.+..|.++|+||++++ +|.|+-|
T Consensus 191 ~~~d---~~~~a~v~vq~Pn~-~G~~ed~~~i~~~~h~~gal~~~-~ad~~aL~~l~~Pge~GADI~vg~-~Q~fg~p~~ 264 (429)
T PF02347_consen 191 GTTD---DDDTAAVMVQNPNT-FGVFEDIKEIADIAHAAGALVIV-GADPNALGGLKSPGEYGADIVVGE-HQTFGIPMG 264 (429)
T ss_dssp CSB----STTEEEEEEESS-T-TSB--THHHHHHHHHHTT-EEEE-CGGCCGCCTC--GGGGT-SEEEEC-CTTTT---C
T ss_pred CCcc---ccCeEEEEeecCCC-CceEeeHHHHHHHHHHcCCEEEE-ecCHHHHhCcCChhhcCccEEeeC-CCCCcccCC
Confidence 1111 78999999999997 79999999999999999999887 553 3455667888999999887 7755311
Q ss_pred -CCceEEEEEEcCh
Q 016612 206 -SDVMAGVLAVKGE 218 (386)
Q Consensus 206 -~g~~~G~i~~~~~ 218 (386)
+|--.|++.++++
T Consensus 265 ~GGP~~G~~a~~~~ 278 (429)
T PF02347_consen 265 FGGPGAGFFAVRED 278 (429)
T ss_dssp CC-S--EEEEE-GG
T ss_pred CCCCCeeeEEEhhh
Confidence 1112789998865
No 369
>COG1003 GcvP Glycine cleavage system protein P (pyridoxal-binding), C-terminal domain [Amino acid transport and metabolism]
Probab=99.32 E-value=2.3e-11 Score=109.14 Aligned_cols=147 Identities=20% Similarity=0.241 Sum_probs=118.7
Q ss_pred hHHHHHHHHHhhcCCCceEEe-CcHHHHH----HHHHHh-cCC----CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 56 TRDALESLLAKLDKADRALCF-TSGMAAL----AAVTHL-LGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~-~~gt~al----~~~~~~-~~~----g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
+..+++++|++++|.|.+-+. .+|+++= .++.+. -.. .+.+|+|+-.|+... ..+...|.+++.|+
T Consensus 110 li~~Lq~~L~~ITG~DavsLQP~AGAqGE~aGll~Ir~YHe~rG~~~R~~~LIP~SAHGTNP----ASAam~G~~VV~V~ 185 (496)
T COG1003 110 LIYELQEWLKEITGMDAVSLQPNAGAQGEYAGLLAIRAYHESRGEGHRNICLIPDSAHGTNP----ASAAMAGFKVVVVK 185 (496)
T ss_pred HHHHHHHHHHHhcCCceeeccCCCCcchhhHHHHHHHHHHHHcCCCcCcEEEeeccccCCCh----hhHhhcCceEEEEe
Confidence 688899999999999975554 5676552 334333 222 468999999998875 55668999999999
Q ss_pred CC-----CHHHHHhhhCCCceEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEeCCCCCCC--ccCCCCCCccEEEec
Q 016612 126 TC-----DLDEVASAIGPWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELGADIVMHS 197 (386)
Q Consensus 126 ~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~~di~~~S 197 (386)
++ |+++|++++.+++.++++++||. .|... ++++|+++.|++|..|..|++-.... ...|.++|.|++-..
T Consensus 186 ~~~~G~VDlddLk~k~~~~~AalMiTnPsT-~GvFE~~I~ei~~ivH~~Gg~vY~DGANlNA~vG~~rPGd~G~DV~HlN 264 (496)
T COG1003 186 CDENGNVDLDDLRAKAEDNLAALMITNPST-LGVFEEDIREICEIVHEAGGQVYYDGANLNAIVGLARPGDMGFDVVHLN 264 (496)
T ss_pred cCCCCCccHHHHHHHhccceeEEEeccCcc-cccchhhHHHHHHHHHHcCCEEEecCcchhhhhccccccccccceEEee
Confidence 85 99999999999999999999988 56664 79999999999999999999976544 336788999999999
Q ss_pred cccccccCCC
Q 016612 198 ATKFIAGHSD 207 (386)
Q Consensus 198 ~sK~~~g~~g 207 (386)
+||+|+.|.|
T Consensus 265 LHKTF~iPHG 274 (496)
T COG1003 265 LHKTFCIPHG 274 (496)
T ss_pred cccccccCCC
Confidence 9999965543
No 370
>TIGR00699 GABAtrns_euk 4-aminobutyrate aminotransferase, eukaryotic type. Alternate names include GABA transaminase, gamma-amino-N-butyrate transaminase, and beta-alanine--oxoglutarate aminotransferase.
Probab=99.30 E-value=1.3e-10 Score=110.20 Aligned_cols=179 Identities=15% Similarity=0.167 Sum_probs=101.7
Q ss_pred HHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc-----CCCCC--CccE
Q 016612 129 LDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLEL--GADI 193 (386)
Q Consensus 129 ~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~--~~di 193 (386)
++++++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+||++. .+... ..... .+|+
T Consensus 238 l~~l~~~l~~~~~~iAAvI~EPv~g~~G~~~~~~~yl~~lr~lc~~~g~lLI~DEV~tGfGrtG~~fa~e~~gv~~~PDi 317 (464)
T TIGR00699 238 LEEVEDLIKKWHKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHNVAFIVDEVQTGVGATGKFWAHEHWNLDDPPDM 317 (464)
T ss_pred HHHHHHHHHhcCCcEEEEEEeCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeeeeeCCCCCcchhHHHhcCCCCCCCE
Confidence 455666663 46899999999888888876 9999999999999999999974 22211 11122 3888
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCC
Q 016612 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 194 ~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
++ ++|.+++ +|+++.+ +.+.. ............++...++....++.+. .+...++++.+.+++.+.-.
T Consensus 318 ~t--~gK~lg~-----gG~~~~~-~~~~~-~~~~~~~~T~~gnp~~~aaa~a~L~~l~--~~~l~~~~~~~g~~l~~~L~ 386 (464)
T TIGR00699 318 VT--FSKKFQT-----AGYFFHD-PAFRP-NKPYRQFNTWMGDPSRALILREIIQEIK--RKDLLENVAHVGDYLYTGLE 386 (464)
T ss_pred EE--ehhhhcc-----CCccccc-hhccC-CCCcccccCCCCCHHHHHHHHHHHHHHH--hcCHHHHHHHHHHHHHHHHH
Confidence 65 5999842 1333332 21110 0111122223345555555555554332 23344555444444432110
Q ss_pred cceEecCCCCCCCchhhhhhccC--CCCceEEEEeCCHHhHHHHHhhcCcceeccC
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAK--GAGSVLSFLTGSLALSKHVVETTKYFSITVS 327 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~ 327 (386)
. +. ..++. ...+.+ +.|.++.+.+++......+.+.+..+|+.+.
T Consensus 387 --~-l~---~~~~~---~i~~vRg~G~Glm~gie~~~~~~~~~i~~~~~~~Gvl~~ 433 (464)
T TIGR00699 387 --D-LQ---KKYPE---FIQNLRGKGRGTFIAWDTPDEAKRDKLLKKARNNGVNIG 433 (464)
T ss_pred --H-HH---HhCCC---ceeeecccCeEEEEEEecCCHHHHHHHHHHHHHCCcEEe
Confidence 0 00 00110 001114 6789999998776667788888888888654
No 371
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=99.28 E-value=4.9e-10 Score=95.84 Aligned_cols=251 Identities=24% Similarity=0.300 Sum_probs=155.5
Q ss_pred hHHHHHHHHHhhcCCCceEE---eCcHHHHHH-HHHHhcCCCCEEEec-CCCCCcHHHHH------hhhcccCCcEEEEe
Q 016612 56 TRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAG-DDLYGGTDRLL------SRVTPKTGVVVKRV 124 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~---~~~gt~al~-~~~~~~~~g~~Vlv~-~~~~~~~~~~~------~~~~~~~g~~~~~v 124 (386)
.|+.+++-.++.+|.+..++ +.|||+|+. ++..+++|||+.+.. ..-|.....++ ...++.+|+.+..+
T Consensus 66 GRdtLe~vyA~vf~aE~a~VRpq~isGTHAI~~aLfg~LRpgDell~i~G~PYDTLeevIG~rg~~~gSL~dfgi~Y~~v 145 (416)
T COG4100 66 GRDTLERVYAQVFGAEAALVRPQIISGTHAIACALFGILRPGDELLYITGSPYDTLEEVIGLRGEGQGSLKDFGIKYKAV 145 (416)
T ss_pred chhHHHHHHHHHhccccceeeeeeecchhHHHHHHHhccCCCCeEEEecCCcchhHHHHhccCCCCcccHHHhCcceeec
Confidence 58899999999999996544 578999997 678899999998743 22243332221 12345677788888
Q ss_pred CCC-----CHHHHHhhhCCCceEEEEe----CCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCc-cCCCCCCcc
Q 016612 125 NTC-----DLDEVASAIGPWTKLVWVE----SPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVL-SRPLELGAD 192 (386)
Q Consensus 125 ~~~-----d~~~l~~~~~~~~~~v~~~----~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~-~~~~~~~~d 192 (386)
+.. |.+.+...++++||+|.+. ....|+=.+.+++++..+.++- ++++++|.+|+...- ..|...|+|
T Consensus 146 ~Lt~~gkiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFvE~~EPt~vGaD 225 (416)
T COG4100 146 PLTADGKIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFVEEKEPTHVGAD 225 (416)
T ss_pred ccccCCcccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhhhccCccccchh
Confidence 864 8999999999999999985 2234554455678888888774 899999999986553 357778999
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC----CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS----GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 268 (386)
++.+|+-|.-+|.----+|+++++.+ +.+.........|. +.+..+...+.+++-....-..+-.+-+.....++
T Consensus 226 liAGSLIKNpGGgiaktGGYiaGk~~-~ve~~~yRlTaPGIG~e~Gat~~~l~~myqGlFlAPhvv~qa~Kga~fta~~l 304 (416)
T COG4100 226 LIAGSLIKNPGGGIAKTGGYIAGKAE-LVEAAAYRLTAPGIGREGGATLYSLREMYQGLFLAPHVVSQAVKGAHFTARFL 304 (416)
T ss_pred hhccceeeCCCCceeeccceeechHH-HHHhhceeeecCCccccccccHHHHHHHHhhhccchHHHHHHhhhhHHHHHHH
Confidence 99999999876532224788988754 44333222222221 22222223333343332333334445555556666
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 321 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 321 (386)
++.. .+..|.+. .+..--+-++.+++.+..-.|++...-
T Consensus 305 e~lg---------~~~~P~~~-----~kRtDlIQavkf~~~eKmIaFcqaiQ~ 343 (416)
T COG4100 305 EKLG---------FPVNPKYD-----AKRTDLIQAVKFGSKEKMIAFCQAIQA 343 (416)
T ss_pred HHcC---------CCCCCccc-----ccccchhhheecCCHHHHHHHHHHHhh
Confidence 6543 22222110 011223445666666656566665443
No 372
>PF00202 Aminotran_3: Aminotransferase class-III; InterPro: IPR005814 Aminotransferases share certain mechanistic features with other pyridoxalphosphate-dependent enzymes, such as the covalent binding of the pyridoxalphosphate group to a lysine residue. On the basis of sequence similarity, these various enzymes can be grouped [] into subfamilies. One of these, called class-III, includes acetylornithine aminotransferase (2.6.1.11 from EC), which catalyzes the transfer of an amino group from acetylornithine to alpha-ketoglutarate, yielding N-acetyl-glutamic-5-semi-aldehyde and glutamic acid; ornithine aminotransferase (2.6.1.13 from EC), which catalyzes the transfer of an amino group from ornithine to alpha-ketoglutarate, yielding glutamic-5-semi-aldehyde and glutamic acid; omega-amino acid--pyruvate aminotransferase (2.6.1.18 from EC), which catalyzes transamination between a variety of omega-amino acids, mono- and diamines, and pyruvate; 4-aminobutyrate aminotransferase (2.6.1.19 from EC) (GABA transaminase), which catalyzes the transfer of an amino group from GABA to alpha-ketoglutarate, yielding succinate semialdehyde and glutamic acid; DAPA aminotransferase (2.6.1.62 from EC), a bacterial enzyme (bioA), which catalyzes an intermediate step in the biosynthesis of biotin, the transamination of 7-keto-8-aminopelargonic acid to form 7,8-diaminopelargonic acid; 2,2-dialkylglycine decarboxylase (4.1.1.64 from EC), a Burkholderia cepacia (Pseudomonas cepacia) enzyme (dgdA) that catalyzes the decarboxylating amino transfer of 2,2-dialkylglycine and pyruvate to dialkyl ketone, alanine and carbon dioxide; glutamate-1-semialdehyde aminotransferase (5.4.3.8 from EC) (GSA); Bacillus subtilis aminotransferases yhxA and yodT; Haemophilus influenzae aminotransferase HI0949; and Caenorhabditis elegans aminotransferase T01B11.2.; GO: 0008483 transaminase activity, 0030170 pyridoxal phosphate binding; PDB: 2JJE_A 2CJH_A 2CIN_A 2JJH_A 2JJF_A 2JJG_A 2CJG_A 2CJD_A 3BS8_A 2YKX_C ....
Probab=99.26 E-value=1.7e-10 Score=106.12 Aligned_cols=222 Identities=19% Similarity=0.157 Sum_probs=132.1
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHHh-c-----
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTHL-L----- 90 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~~-~----- 90 (386)
...+|.-+|++.++...... ...+..... ..+...++.+.|.+.++ .+...+.+||++|+...+.+ .
T Consensus 27 ~~~lGh~~p~i~~ai~~~~~----~~~~~~~~~~~~~~~~~la~~L~~~~p~~~~~v~f~~sGseAve~Alkla~~~~~~ 102 (339)
T PF00202_consen 27 SVNLGHNHPEIAEAIAEQAN----KLNYVSFSGFTHPEAAELAEKLAELFPGGLDRVFFANSGSEAVEAALKLARQYHNK 102 (339)
T ss_dssp TTTT-BT-HHHHHHHHHHHH----HCSSCSTTTSEEHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCCccccchhHHHHhh----hcccccccceeccchhhhhhhhhhccccccceeeeccCchHHHHHHHHHhhccccc
Confidence 45578778777664332211 111111111 33578899999999983 34788889999998643332 1
Q ss_pred ---CCCCEEEecCCCCCcHH-HHH--------hhhcccCCcEEEEeCCCCHHH----------HH----hhhCCCceEEE
Q 016612 91 ---GTGEEIVAGDDLYGGTD-RLL--------SRVTPKTGVVVKRVNTCDLDE----------VA----SAIGPWTKLVW 144 (386)
Q Consensus 91 ---~~g~~Vlv~~~~~~~~~-~~~--------~~~~~~~g~~~~~v~~~d~~~----------l~----~~~~~~~~~v~ 144 (386)
....+|+.....|++.. ..+ +.........+..+|..++.. ++ +.-.+++.+|+
T Consensus 103 ~~~~~r~~il~~~~~yHG~t~~~~s~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~iaavi 182 (339)
T PF00202_consen 103 RAYTGRRKILAFEGSYHGRTLGALSLTGNPPYRKGFGPLYPGVVFVPFPDPAADEEEQACLNALEELIAALNADEIAAVI 182 (339)
T ss_dssp THHHTTTEEEEETTTB-TSSHHHHHHSSSTHHHTTTCSSSTTEEEEETTCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEE
T ss_pred ccccCCceEEEeeeeeeccCcccccccCCccccccccccccccccccCCccchhhhHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 23467887777776532 111 111222223456677666554 22 22246789999
Q ss_pred EeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEE
Q 016612 145 VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLA 214 (386)
Q Consensus 145 ~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~ 214 (386)
++......|...+ +++|.++|++||+++|+||++.. +-.. ......+|+++. +|.+++ |+..+.++
T Consensus 183 vEPi~g~~G~~~~~~~~l~~l~~lc~~~gillI~DEV~tG~gRtG~~~a~~~~gv~PDiv~~--gK~l~g--G~p~sav~ 258 (339)
T PF00202_consen 183 VEPIQGEGGMIPPPPEYLRELRELCREHGILLIADEVQTGFGRTGKFFASEHYGVDPDIVTF--GKGLGG--GLPISAVL 258 (339)
T ss_dssp EESSBTTTTSBEE-TTHHHHHHHHHHHTT-EEEEEETTTTTTTTSSSSGHHHHTSSSSEEEE--EGGGGT--TSSEEEEE
T ss_pred EeccccccCccccccchhhehcccccccccceecccccccccccCCccceecccccCccccc--ccchhh--hhhccccc
Confidence 9998877777753 89999999999999999999863 2222 122356799876 699976 36688888
Q ss_pred EcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH
Q 016612 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM 250 (386)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (386)
++ +++.+.+...........++....++...++.+
T Consensus 259 ~~-~~i~~~~~~~~~~~T~~g~p~~~aaa~~~l~~~ 293 (339)
T PF00202_consen 259 GS-EEIMEAFQPGSHGSTFGGNPLSCAAALATLEIL 293 (339)
T ss_dssp EE-HHHHTTSCTTSSTCTTTT-HHHHHHHHHHHHHH
T ss_pred cc-chhhccccccccccccccchHhhhhhhhHHHhh
Confidence 87 445543322222233345566666665555443
No 373
>KOG1404 consensus Alanine-glyoxylate aminotransferase AGT2 [Amino acid transport and metabolism]
Probab=99.24 E-value=1e-09 Score=97.31 Aligned_cols=177 Identities=18% Similarity=0.180 Sum_probs=112.2
Q ss_pred CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC----CCccCCCCC--CccEEEeccccccccCCC
Q 016612 138 PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS----PVLSRPLEL--GADIVMHSATKFIAGHSD 207 (386)
Q Consensus 138 ~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~----~~~~~~~~~--~~di~~~S~sK~~~g~~g 207 (386)
+.+.+++.+..+...|.+.+ +++..++|+++|.++|.||+++. |++...... -.||+ |++|.++. |
T Consensus 211 ~~vAafiaEtIqGvgG~v~~p~GYlka~~~~v~k~Ggl~IaDEVqtGfGRtG~~wgfe~h~v~PDIv--TmAKgiGn--G 286 (442)
T KOG1404|consen 211 ETVAAFIAETIQGVGGIVELPPGYLKAAYKVVRKRGGLFIADEVQTGFGRTGHMWGFESHGVVPDIV--TMAKGIGN--G 286 (442)
T ss_pred CceeEEEeehhccCCccccCCchHHHHHHHHHHHcCCEEEehhhhhccccccccccccccCCCccHH--HHHhhccC--C
Confidence 46778888999887777753 89999999999999999999862 333322222 34676 68999964 3
Q ss_pred ceEEEEEEcChhHHHHHHHhh-hhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCC
Q 016612 208 VMAGVLAVKGERLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP 286 (386)
Q Consensus 208 ~~~G~i~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~ 286 (386)
.-.|.++.. +++.+.+.... ....-+..+..++.....++. .+.+.+++++..+..++.+.-. .+.+..+
T Consensus 287 ~Pl~AVvtt-~EIa~v~~~~~~~fnTyggnP~a~avg~aVL~V--ikee~LqE~aa~vG~yl~~~l~---~l~d~h~--- 357 (442)
T KOG1404|consen 287 FPLGAVVTT-PEIADVLNQKSSHFNTYGGNPVACAVGLAVLKV--IKEENLQENAAEVGSYLLEKLA---ALKDKHP--- 357 (442)
T ss_pred CcceeeecC-HHHHHHHHhccccccccCCCchhHHHHHHHHHH--HHHHhHHHHHHHHHHHHHHHHH---HHhhcCC---
Confidence 557888776 56776664443 333334555555555555543 3446788888888877765321 0111111
Q ss_pred chhhhhhccCCCCceEEEEe-CC--------HHhHHHHHhhcCcceeccCCCCc
Q 016612 287 GHELHYSQAKGAGSVLSFLT-GS--------LALSKHVVETTKYFSITVSFGSV 331 (386)
Q Consensus 287 ~~~i~~~~~~~~~~~~~~~~-~~--------~~~~~~l~~~l~~~gi~~~~G~~ 331 (386)
...+-+++|.|+.+++ ++ ......+.+.+++.|+.+.-|+.
T Consensus 358 ----iIGdVRG~GLm~GvE~V~dk~~~~pp~~~~~~~i~~~cke~Gvlvg~g~i 407 (442)
T KOG1404|consen 358 ----IIGDVRGRGLMLGVELVSDKSEPKPPATAEGAVIGEQCKELGVLVGKGGI 407 (442)
T ss_pred ----ceeecccceeEEEEEEecccCCCCCcchHHHHHHHHHHHHhCeeeecccc
Confidence 1123377888888876 11 22344677777888887755554
No 374
>TIGR03811 tyr_de_CO2_Ent tyrosine decarboxylase, Enterococcus type. This model represents tyrosine decarboxylases in the family of the Enterococcus faecalis enzyme Tdc. These enzymes often are encoded next to tyrosine/tyramine antiporter, together comprising a system in which tyrosine decarboxylation can protect against exposure to acid conditions. This clade differs from the archaeal tyrosine decarboxylases associated with methanofuran biosynthesis.
Probab=99.20 E-value=1.4e-09 Score=105.84 Aligned_cols=212 Identities=17% Similarity=0.147 Sum_probs=140.4
Q ss_pred CchHHHHHHHHHhhcCCC--ceEEeCcHHHH-HHHHHHh--cC-------C-----------------------------
Q 016612 54 NPTRDALESLLAKLDKAD--RALCFTSGMAA-LAAVTHL--LG-------T----------------------------- 92 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~--~~i~~~~gt~a-l~~~~~~--~~-------~----------------------------- 92 (386)
..+-.++-+++++++|.+ ...++++||.| +.++... .+ .
T Consensus 122 t~lE~~vi~~la~l~G~~~~~G~~TsGGT~ANl~aL~~AR~~k~~p~a~~~~~~~~~~~~~~w~l~n~~~~~~~~l~~~~ 201 (608)
T TIGR03811 122 SQMEEEVGKEFATLMGYKNGWGHIVADGSLANLEGLWYARNIKSLPFAMKEVKPELVAGKSDWELLNMPTKEIMDLLESA 201 (608)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeEEeCChHHHHHHHHHHHHHhhhccchhhhccccccccccchhhccccccccccccccc
Confidence 346677888999999876 46889999966 4444321 10 0
Q ss_pred --------------CC------EEEecCCCCCcHHHHHhhhcccCCc---EEEEeCCC-----CHHHHHhhhC----C--
Q 016612 93 --------------GE------EIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIG----P-- 138 (386)
Q Consensus 93 --------------g~------~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~~~----~-- 138 (386)
|. .++++...|.++. +.+...|+ .++.|+.+ |+++|++.+. +
T Consensus 202 ~~~~~~~~~~~~~~g~~~~~~~~vl~s~~aHyS~~----KAa~ilGlG~~~vv~VpvD~~~rmd~~~L~~~I~~~~~~g~ 277 (608)
T TIGR03811 202 GDQIDEIKAHSARSGKDLQKLGKWLVPQTKHYSWL----KAADIIGIGLDQVIPVPVDSNYRMDINELEKIIRKLAAEKT 277 (608)
T ss_pred ccchhhhhhhccccccccccceEEEECCCccHHHH----HHHHHcCCCcccEEEeecCCCCcCCHHHHHHHHHHHHhcCC
Confidence 00 5778888888885 55556666 46666653 8899988775 2
Q ss_pred CceEEEEeCCCCCCcccccHHHHHHHH---HHcCC--EEEEeCCCCCCC---ccC------C------------------
Q 016612 139 WTKLVWVESPTNPRQQICDIRKIAEMA---HAHGA--LLLVDNSIMSPV---LSR------P------------------ 186 (386)
Q Consensus 139 ~~~~v~~~~~~nptG~~~~l~~i~~la---~~~~~--~li~D~a~~~~~---~~~------~------------------ 186 (386)
.+-+|+.+..+..+|.+.|+++|+++| +++|+ ++++|+||+... +.+ +
T Consensus 278 p~~~VVataGTT~~GaiDpl~eI~~l~~~~~~~gl~~~lHVDAAyGG~~~~l~~~~~~~~~p~~~~~~~~~~~~~f~~~~ 357 (608)
T TIGR03811 278 PILGVVGVVGSTEEGAVDGIDKIVALRNKLMKEGIYFYLHVDAAYGGYGRAIFLDEDDNFIPYDDLQEVHAEYGVFTEKK 357 (608)
T ss_pred CeEEEEEEcCCcCCcccCCHHHHHHHHHHHHHcCCceeEeeeccccchhhhhhccccccccccchhhccccccccccccc
Confidence 244567778888999999999999999 66887 699999998532 111 0
Q ss_pred ------------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh----h-------------cCC--CC
Q 016612 187 ------------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN----A-------------EGS--GL 235 (386)
Q Consensus 187 ------------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~----~-------------~~~--~~ 235 (386)
.-..+|-++.++||++..|-+ +|+++.+++.+.+.+..... . .++ +.
T Consensus 358 ~~l~~~~~~~l~gle~ADSItvDpHK~g~~Py~--~G~ll~Rd~~~~~~~~~~a~Yl~~~~~~~p~~~g~~~legSR~ga 435 (608)
T TIGR03811 358 EYISREVYNAYKAISEAESVTIDPHKMGYIPYS--AGGIVIQDIRMRDVISYFATYVFEKGADIPALLGAYILEGSKAGA 435 (608)
T ss_pred ccccHhHHHHHhcCcCceEEEeCcccccccCCC--eEEEEEeCHHHHHHHhcCcchhccccccCcccccccceecCCccH
Confidence 002579999999999987765 88888888765443321100 0 011 11
Q ss_pred ChhhHHHHHhcC----CcHHHHHHHHHHHHHHHHHHHhhC
Q 016612 236 APFDCWICLRGV----KTMALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 236 ~~~~~~~~~~~~----~~~~~~~~~~~~~~~~l~~~l~~~ 271 (386)
.....|+..+.+ +.+...+++..+.++.+.+.+++.
T Consensus 436 ~AlklW~~lr~l~~G~~Gyg~~i~~~i~~A~~~~~~L~~~ 475 (608)
T TIGR03811 436 TAASVWAAHKVLPLNVTGYGKLIGASIEGAHRFYDFLNNL 475 (608)
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 123444444433 356666777778888888888764
No 375
>PLN02974 adenosylmethionine-8-amino-7-oxononanoate transaminase
Probab=99.18 E-value=6.7e-10 Score=111.70 Aligned_cols=176 Identities=13% Similarity=0.132 Sum_probs=101.8
Q ss_pred CCceEEEEeCC-CCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC----CCcc--CCCCCCccEEEeccccccccCC
Q 016612 138 PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS----PVLS--RPLELGADIVMHSATKFIAGHS 206 (386)
Q Consensus 138 ~~~~~v~~~~~-~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~----~~~~--~~~~~~~di~~~S~sK~~~g~~ 206 (386)
+++.+|+++.. +.-.|.+.+ ++.|.++|++||+++|.||++.. |... +.....+||++. +|.++|
T Consensus 583 ~~iAAvI~EPviqGaGGmi~~~~~yl~~lr~lc~~~gilLI~DEV~TGfGRtG~~fa~e~~gv~PDIi~~--gKgLtg-- 658 (817)
T PLN02974 583 GHIAALIIEPVLHGAGGMLLIDPLFQRALVQVCRSRKIPVIFDEVFTGLWRLGVESAWELLGCKPDIACY--AKLLTG-- 658 (817)
T ss_pred CCEEEEEEeccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEeecccCCCcccchhhHHhcCCCCCEEee--cccccC--
Confidence 46889999985 676677764 89999999999999999999752 2221 122345799874 999875
Q ss_pred C-ceEEEEEEcChhHHHHHHH------hhhhcCCCCChhhHHHHHhcCCcHHHH--HHHHHHHHHHHHHHHhhCCCcceE
Q 016612 207 D-VMAGVLAVKGERLAKELYF------LQNAEGSGLAPFDCWICLRGVKTMALR--VEKQQDNAQKIAEFLASHPRVKKV 277 (386)
Q Consensus 207 g-~~~G~i~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~l~~~~~~~~~ 277 (386)
| +-+|.++++ +++.+.+.. +......+.++..+++++..++.+... .+...++.+.+..++.+.-
T Consensus 659 G~~Plaa~l~~-~~I~~~f~~~~~~~~~~hg~Ty~gnpl~cAaala~L~~~~~~~~~~~l~~~~~~l~~~l~~~l----- 732 (817)
T PLN02974 659 GLVPLAATLAT-EEVFEAFRGPSKLDALLHGHSYTAHPMGCAAAAKALQWYKDPSTNPNLIPPGSRLRELWDEEL----- 732 (817)
T ss_pred CCCccEEEEEc-HHHHHhhccccccCCcccCCCCCcCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH-----
Confidence 4 346777776 556654421 112223355666666666655543221 1233344444443333210
Q ss_pred ecCCCCCCCchhhhhhccCCCCceEEEEeCC--------HHhHHHHHhhcC-cceeccCC
Q 016612 278 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LALSKHVVETTK-YFSITVSF 328 (386)
Q Consensus 278 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~l~~~l~-~~gi~~~~ 328 (386)
...+.+++.+ .+.++.|.++.+.+.+ .....++.+.+. .+|+.+++
T Consensus 733 -~~~l~~~p~V----~~VRg~Gl~~~iel~~~~~~~~~~~~~a~~v~~~~~~~~Gl~~r~ 787 (817)
T PLN02974 733 -VRAISSLPNV----ERVVSLGTVLALELDAEGSGSGYSSLYARSVVRRLRREDGIYARP 787 (817)
T ss_pred -HHHHhhCCCe----eEEEeeeeEEEEEEecCCcccccchHHHHHHHHHHHHhCCEEEEe
Confidence 0001111111 1225678888888732 123456666666 67776554
No 376
>PRK06209 glutamate-1-semialdehyde 2,1-aminomutase; Provisional
Probab=99.18 E-value=2e-09 Score=102.35 Aligned_cols=161 Identities=17% Similarity=0.163 Sum_probs=94.0
Q ss_pred HHHHHHHHHhhcC-CCceEEeCcHHHHHHHHHHh---cCCCCEEEec-CCCCCcHHHHHh-hhcccCCc------EEEEe
Q 016612 57 RDALESLLAKLDK-ADRALCFTSGMAALAAVTHL---LGTGEEIVAG-DDLYGGTDRLLS-RVTPKTGV------VVKRV 124 (386)
Q Consensus 57 ~~~l~~~l~~~~g-~~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~-~~~~~~~~~~~~-~~~~~~g~------~~~~v 124 (386)
..++.+.+.+++. .+...+++||++|+.+.+.+ .....+|+.. ...|++...... ......+. .+..+
T Consensus 90 ~~~la~~l~~~~p~~~~v~f~~sGseA~e~AlklAr~~tgr~~i~~~~~~~~h~~~~~~~g~~~~~~~~~~~~~~~~~~~ 169 (431)
T PRK06209 90 ELDAAESFLELIDGADMVKFCKNGSDATSAAVRLARAYTGRDLVARCADHPFFSTDDWFIGTTPMSAGIPASVSALTVTF 169 (431)
T ss_pred HHHHHHHHHHhCCccceEEEecCHHHHHHHHHHHHHHHhCCCeEEEeccCccccccccccccCCCCCCCChhHhcccccc
Confidence 3456667777663 45778889999998643332 2223445543 223322110000 00001111 13344
Q ss_pred CCCCHHHHHhhhC---CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC------CCCCCccEEE
Q 016612 125 NTCDLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR------PLELGADIVM 195 (386)
Q Consensus 125 ~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~------~~~~~~di~~ 195 (386)
+..|++++++.+. +++.+|+++......+....+++|.++|++||+++|+||++. |.... .....+|++
T Consensus 170 ~~~d~~~l~~~l~~~~~~~aavi~Epv~g~~~~~~~l~~l~~lc~~~g~lLI~DEv~t-G~~~~~~g~~~~~gv~PDi~- 247 (431)
T PRK06209 170 RYNDIASLEALFEDHPGRIACVILEPATADEPQDGFLHEVRRLCHENGALFILDEMIT-GFRWHMRGAQKLYGIVPDLS- 247 (431)
T ss_pred CCCCHHHHHHHHHhCCCCEEEEEEccccCCCCCHHHHHHHHHHHHHcCCEEEEEcccc-cCCcCcchhhHHhCCCccee-
Confidence 5568999998874 467788888765432222349999999999999999999974 32111 122346775
Q ss_pred eccccccccCCCceEEEEEEcChhHHHH
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLAKE 223 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~~~ 223 (386)
+++|.+++ |+.+|+++++ +++.+.
T Consensus 248 -t~gK~lgg--G~p~~av~~~-~~i~~~ 271 (431)
T PRK06209 248 -CFGKALGN--GFAVSALAGK-REYMEL 271 (431)
T ss_pred -eehhhhcC--CcccEEEEEH-HHHHhh
Confidence 46999975 3557888886 445543
No 377
>KOG1383 consensus Glutamate decarboxylase/sphingosine phosphate lyase [Amino acid transport and metabolism]
Probab=99.08 E-value=6.4e-09 Score=94.46 Aligned_cols=277 Identities=16% Similarity=0.205 Sum_probs=168.1
Q ss_pred hHHHHHHHHHhhcCCC-c--eEEeCcHHHH-HHHHHH---hc-C-CC---CEEEecCCCCCcHHHHHhhhcccCCcEEEE
Q 016612 56 TRDALESLLAKLDKAD-R--ALCFTSGMAA-LAAVTH---LL-G-TG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVKR 123 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~--~i~~~~gt~a-l~~~~~---~~-~-~g---~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~ 123 (386)
+..++-..++.+++.+ + ...+++||++ +.+... .. . +| ..++++...| ..|.+.++.+++++..
T Consensus 121 ~e~~~Vnm~~~L~~~~~~~~g~~t~G~Ses~l~~~k~~~~~r~~~k~I~~p~iv~~~~v~----~a~eK~a~yf~v~l~~ 196 (491)
T KOG1383|consen 121 LEAECVNMIANLFNAPSDSCGCGTVGGSESGLAAKKSYRNRRKAQKGIDKPNIVTPQNVH----AAFEKAARYFEVELRE 196 (491)
T ss_pred HHHHHHHHHHHHhcCCccccCccccccchHHHHHHHHHHHHHHhccCCCCccccchHHHH----HHHHHHHhhEEEEEEe
Confidence 3455666777887665 2 3456667766 333222 11 1 12 2334444343 3356888899999999
Q ss_pred eCCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH-cCCEEEEeCCCCCCCcc----CC--CC--
Q 016612 124 VNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA-HGALLLVDNSIMSPVLS----RP--LE-- 188 (386)
Q Consensus 124 v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~-~~~~li~D~a~~~~~~~----~~--~~-- 188 (386)
++.+ |+.++.+.++++|..++.+.|+.|+|.+.|+++|.++..+ +++.+++|.+.+....+ .. .+
T Consensus 197 V~~~~~~~~~D~~k~~~~i~eNti~lv~~~~~~p~G~~e~ve~l~~l~~e~w~ipiHvDa~~GgFi~p~~~~~~~~fdFr 276 (491)
T KOG1383|consen 197 VPLDEGDYRVDPGKVVRMIDENTIMLVGSLPNFPTGEIEDVEKLADLLLEIWDIPIHVDACLGGFINPAGYLNEEEFDFR 276 (491)
T ss_pred eeccccceEecHHHHHHHhccceEEEEEEcCCCCccchhhHHHHHHHHHHHhCCceeecccCccccccccccCccccccC
Confidence 9875 8999999999999999999999999999999999999999 99999999997643331 11 11
Q ss_pred -CCccEEEeccccccccCCCceEEEEEEcChhHH-HHHHHhhhhc----------C--CCCChhhHHHHH--hcCCcHHH
Q 016612 189 -LGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAE----------G--SGLAPFDCWICL--RGVKTMAL 252 (386)
Q Consensus 189 -~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~-~~~~~~~~~~----------~--~~~~~~~~~~~~--~~~~~~~~ 252 (386)
.+..-...+.||+-..|.| .+|++-+++++. ..+....... + .+..-..+|+.+ .+.+.+..
T Consensus 277 ~p~V~Sisa~~HKYGl~~~G--~~~vl~r~k~~~~~q~~~~~~w~Gg~y~s~TlngSR~g~~va~~wa~~~~lG~eGY~~ 354 (491)
T KOG1383|consen 277 VPGVTSISADGHKYGLAPAG--SSWVLYRNKELLPHQLFFHTDWLGGIYASPTLNGSRPGSQVAAQWAALMSLGEEGYRE 354 (491)
T ss_pred CCCceeEeeccceeeeeecC--cEEEEEcccccccceEEEeccccCccccCcccccCCcccHHHHHHHHHHHhhHHHHHH
Confidence 2345566789998888888 466555555442 2211111111 1 111223344433 24445555
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe--CCHHhHHHHHhhcCcceeccCCCC
Q 016612 253 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT--GSLALSKHVVETTKYFSITVSFGS 330 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--~~~~~~~~l~~~l~~~gi~~~~G~ 330 (386)
..++..++++.+++.+++.+ ++.++.+ +.++|.. .+.-...++-+.+...|+..+.
T Consensus 355 ~~~~ive~~~~l~egie~i~--------------~i~i~gk------p~vs~~~~~s~~~~i~elsd~l~~~GW~lna-- 412 (491)
T KOG1383|consen 355 NTQNIVETARKLREGIENIK--------------GIKIVGK------PLVSFILFGSNDVNIFELSDLLRKKGWILNA-- 412 (491)
T ss_pred HHHHHHHHHHHHHHhhhccc--------------cceecCC------CcEEEEEccCCccchhhhhHHHHhcCcCccc--
Confidence 56666677777666666543 3333322 3355544 1222355677777777775443
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHHHHhcC
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~~l~~~ 384 (386)
+.+|. .+-+++. .+-.++++..++++++++
T Consensus 413 ----lq~P~--------------------a~Hi~vt~~~~~~~~A~~~v~Di~~~~~el 447 (491)
T KOG1383|consen 413 ----LQFPA--------------------AIHICVTRVHAREDVADRFVADIRKVVEEL 447 (491)
T ss_pred ----cCCCC--------------------ceEEEEEeeeccHHHHHHHHHHHHHHHHHH
Confidence 22232 1444443 233588888888887653
No 378
>PRK12566 glycine dehydrogenase; Provisional
Probab=99.07 E-value=8.2e-09 Score=103.56 Aligned_cols=190 Identities=19% Similarity=0.213 Sum_probs=129.8
Q ss_pred eeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC------CC-chHHHHHHHHHhhcCCC--ceEEeCcHHHHH
Q 016612 13 LMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS------GN-PTRDALESLLAKLDKAD--RALCFTSGMAAL 83 (386)
Q Consensus 13 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~------g~-~~~~~l~~~l~~~~g~~--~~i~~~~gt~al 83 (386)
..++= +.++++..-|++.+......+ .-...|.++ |. ...-+.+..+++++|.+ +.-+...+|++-
T Consensus 80 ~~~fi-G~G~y~~~~P~vi~~~i~~~~----~~yTaYTPYQpEisQG~Lqal~e~Qtmi~~LtGm~vaNASl~D~atA~a 154 (954)
T PRK12566 80 WTSLI-GMGYHGTVTPTVILRNVLENP----GWYTAYTPYQPEIAQGRLEALLNFQQMTIDLTGLDLANASLLDEATAAA 154 (954)
T ss_pred ccccc-cccccCCcCcHHHHHHHHhCc----hhhhcCCCCCchhhhHHHHHHHHHHHHHHHHhCchhhhhhhccchhHHH
Confidence 33443 566777766665532222221 112234443 21 23455678899999998 667777776443
Q ss_pred H-HHHH--hcC-CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHH
Q 016612 84 A-AVTH--LLG-TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 84 ~-~~~~--~~~-~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~ 159 (386)
. ++++ ..+ +..+|+|++..|+.+..+++..++..|++++. +++++.+++++..+++.+|+. .|.+.|++
T Consensus 155 EA~~ma~~~~~~k~~~~~v~~~~hP~~~~v~~t~~~~~g~~i~~------~~~~~~~~~~~~~v~vq~P~~-~G~i~d~~ 227 (954)
T PRK12566 155 EAMALAKRVAKSKSNRFFVDEHCHPQTLSVLRTRAEGFGFELVV------DAVDNLAAHAVFGALLQYPDT-HGEIRDLR 227 (954)
T ss_pred HHHHHHHHHhhcCCCEEEECCCCCHHHHHHHHHhhhcCCcEEEE------cchhhcCCCCEEEEEEECCCC-ceEEccHH
Confidence 3 2223 222 25689999999999988888889999999875 345555666789999999986 79999999
Q ss_pred HHHHHHHHcCCEEEEeCC--CCCCCccCCCCCCccEEEecccc-----ccccCCCceEEEEEEcCh
Q 016612 160 KIAEMAHAHGALLLVDNS--IMSPVLSRPLELGADIVMHSATK-----FIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a--~~~~~~~~~~~~~~di~~~S~sK-----~~~g~~g~~~G~i~~~~~ 218 (386)
+|.+++|++|.++++ .+ .+.+.+..|.++|+||++++..- .|+||. .|++.++++
T Consensus 228 ~i~~~~h~~gal~~~-~~d~laL~ll~~Pge~GADI~vG~~Q~fGvp~~~GGP~---ag~~a~~~~ 289 (954)
T PRK12566 228 PLIDQLHGQQALACV-AADLLSLLVLTPPGELGADVVLGSTQRFGVPMGYGGPH---AAYFACRDD 289 (954)
T ss_pred HHHHHHHHcCCEEEE-EeCHHHHhCCCChhhcCCcEEeeCCCcCCCCCCCCCCC---eeeeeehHH
Confidence 999999999988663 33 34556677889999999987443 555554 799998854
No 379
>KOG1412 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT2/GOT1 [Amino acid transport and metabolism]
Probab=99.05 E-value=1.4e-07 Score=81.52 Aligned_cols=291 Identities=17% Similarity=0.208 Sum_probs=170.6
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCCC-------c--eEEeCcHHHHHHHH---HHhcCCCCEEEecCCCCCcHHHHHh
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKAD-------R--ALCFTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLS 111 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~~-------~--~i~~~~gt~al~~~---~~~~~~g~~Vlv~~~~~~~~~~~~~ 111 (386)
.+.|-+- |.+ .+.+..+.+ +|.+ . .+-.-|||.|+.+. ++..-+...|.+++|+|..+.
T Consensus 67 NHEYLpi~Gl~~F~~~A~el~---lg~~s~a~kE~Rv~~vQslsGTGAl~~~A~Fl~~~~~~~~VY~SnPTW~nH~---- 139 (410)
T KOG1412|consen 67 NHEYLPILGLPTFTKAATELL---LGADSPAIKEDRVFGVQSLSGTGALRIAADFLATFYNKNTVYVSNPTWENHH---- 139 (410)
T ss_pred cchhccccCchhhhhhhHHHh---cCCCchhhhhccccceeeccccchhhhhHHHHHHhcccceeEecCCchhHHH----
Confidence 3456665 776 444444443 3432 1 35566888887533 332223567999999998875
Q ss_pred hhcccCCc----EEEEeCCC----CHHHHHhhhC--CCceEEEEeCC-CCCCccccc---HHHHHHHHHHcCCEEEEeCC
Q 016612 112 RVTPKTGV----VVKRVNTC----DLDEVASAIG--PWTKLVWVESP-TNPRQQICD---IRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 112 ~~~~~~g~----~~~~v~~~----d~~~l~~~~~--~~~~~v~~~~~-~nptG~~~~---l~~i~~la~~~~~~li~D~a 177 (386)
.+++..|. ...+++.. |.+.+...+. +.-..+++..+ +||||.-.- ++.|++..++.+.+.+.|-+
T Consensus 140 ~if~~aGf~tv~~Y~yWd~~~k~~d~e~~Lsdl~~APe~si~iLhaCAhNPTGmDPT~EQW~qia~vik~k~lf~fFDiA 219 (410)
T KOG1412|consen 140 AIFEKAGFTTVATYPYWDAENKCVDLEGFLSDLESAPEGSIIILHACAHNPTGMDPTREQWKQIADVIKSKNLFPFFDIA 219 (410)
T ss_pred HHHHHcCCceeeeeeeecCCCceecHHHHHHHHhhCCCCcEEeeeccccCCCCCCCCHHHHHHHHHHHHhcCceeeeehh
Confidence 55567773 23333332 7777777776 33345555555 999998763 77888888899999999999
Q ss_pred CCCCCccCCCC----------CCc-cEEEeccccccccCCCceEEEE--EEcChhHHH----HHHHhhhhcCCCCChhhH
Q 016612 178 IMSPVLSRPLE----------LGA-DIVMHSATKFIAGHSDVMAGVL--AVKGERLAK----ELYFLQNAEGSGLAPFDC 240 (386)
Q Consensus 178 ~~~~~~~~~~~----------~~~-di~~~S~sK~~~g~~g~~~G~i--~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 240 (386)
|......++.. .|. -+++.||+|.+ |.-+-|.|-+ +.+++.... .+..+.+..-++.+...+
T Consensus 220 YQGfASGD~~~DawAiR~fV~~g~e~fv~QSFaKNf-GlYneRvGnltvv~~n~a~i~~v~SQl~lviR~~~SNPPAyGA 298 (410)
T KOG1412|consen 220 YQGFASGDLDADAWAIRYFVEQGFELFVCQSFAKNF-GLYNERVGNLTVVVNNPAVIAGVKSQLTLVIRSNWSNPPAYGA 298 (410)
T ss_pred hcccccCCccccHHHHHHHHhcCCeEEEEhhhhhhc-ccccccccceEEEecChhHHHHHHHHHHHHHhhccCCCcchhh
Confidence 86444433321 122 48999999998 4445577764 344444332 233334444445555555
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCC-cceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhc
Q 016612 241 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT 319 (386)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 319 (386)
......+.. .++.+++....+.+..++.+-+. +++.+ ..|.. ||. |+....+.+||++.=-.+...+.+.++.
T Consensus 299 rIV~kvL~t-P~lre~W~~sik~MssRI~~MR~aLrd~L-~aL~T-PGt---WDHI~~QiGMFSyTGLtp~qV~~li~~h 372 (410)
T KOG1412|consen 299 RIVHKVLST-PELREQWIQSIKTMSSRIKKMRTALRDHL-VALKT-PGT---WDHITQQIGMFSYTGLTPAQVDHLIENH 372 (410)
T ss_pred HHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCC-CCc---HHHHHhhccceeecCCCHHHHHHHHHhc
Confidence 554444443 44555666555555555443221 00000 11221 221 1112346789998865566677888887
Q ss_pred CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhcC
Q 016612 320 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 320 ~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~~ 384 (386)
+++-+. + =|||++ ..++|...+++.++++..
T Consensus 373 ~vyLl~--------------------------------~--GRInisGLN~~NveyVAkAIde~Vr~~ 406 (410)
T KOG1412|consen 373 KVYLLS--------------------------------D--GRINISGLNMKNVEYVAKAIDETVRAI 406 (410)
T ss_pred eEEEec--------------------------------C--CcEeeeccccccHHHHHHHHHHHHHhh
Confidence 765331 1 246653 588999999998888765
No 380
>KOG2467 consensus Glycine/serine hydroxymethyltransferase [Amino acid transport and metabolism]
Probab=99.03 E-value=2.3e-07 Score=81.92 Aligned_cols=283 Identities=19% Similarity=0.166 Sum_probs=162.4
Q ss_pred CCchHHHHHHH----HHhhcCCCc-----eEEeCcHHHHH-HHHHHhcCCCCEEE---ecCCCCCcHHHHHhhhcccCCc
Q 016612 53 GNPTRDALESL----LAKLDKADR-----ALCFTSGMAAL-AAVTHLLGTGEEIV---AGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 53 g~~~~~~l~~~----l~~~~g~~~-----~i~~~~gt~al-~~~~~~~~~g~~Vl---v~~~~~~~~~~~~~~~~~~~g~ 119 (386)
|+....++|.. ..+.|+.+. .+-.-||+.|. .+-.++++|++.+. .|+.+|-++-.. ... ++-..
T Consensus 80 Gne~ID~iE~LCq~RALeaF~ldp~kWGVNVQp~SGSPANfavYtall~Ph~RiMGLDLP~GGHLsHGy~-T~~-kkISa 157 (477)
T KOG2467|consen 80 GNEYIDQIELLCQKRALEAFGLDPEKWGVNVQPYSGSPANFAVYTALLKPHERIMGLDLPSGGHLSHGYQ-TPT-KKISA 157 (477)
T ss_pred cchHHHHHHHHHHHHHHHHhCCCHHHCceeeccCCCCchhhHHHhhhcCCCCeeeeccCCCCCccccccc-cCC-ceeee
Confidence 55556555543 335577661 34456788664 56677999999997 444444322100 111 11111
Q ss_pred EEEEeC-------C----CCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC-----CCC
Q 016612 120 VVKRVN-------T----CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPV 182 (386)
Q Consensus 120 ~~~~v~-------~----~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~-----~~~ 182 (386)
.-++++ . .|-|.|++... -++++|+.-.... ....|.+++.++|.+.|.+++.|.+|- .+.
T Consensus 158 ~SiyFeSmPYkv~~~TG~IDYD~Le~~A~~frPk~iiaG~SaY--~R~~DYaR~R~Iad~~gA~Lm~DMAHISgLVAA~v 235 (477)
T KOG2467|consen 158 TSIYFESMPYKVDPSTGYIDYDKLEKTATLFRPKLIIAGTSAY--SRLIDYARFRKIADKVGAYLMADMAHISGLVAAGV 235 (477)
T ss_pred eeeecccCceeeCCCCCceehHHHHHHHHhcCCcEEEeccccc--hhhccHHHHHHHHHhcCceeehhhhhHHHHHhccc
Confidence 111211 1 28889987654 4777777433332 355789999999999999999999985 345
Q ss_pred ccCCCCCCccEEEeccccccccCCCceEEEEEEcCh--h------------HHHHHHHhhh---hcCCCCChh---hHHH
Q 016612 183 LSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--R------------LAKELYFLQN---AEGSGLAPF---DCWI 242 (386)
Q Consensus 183 ~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~--~------------~~~~~~~~~~---~~~~~~~~~---~~~~ 242 (386)
.++|.+ .+|||+.+.||++-|| |+|.|..++- . +.+++..... .+|...... ..++
T Consensus 236 ipsPFe-y~DiVTTTTHKsLRGP---Rg~mIFyRkGvk~~~~k~g~~i~ydlE~kINfaVFP~lQGGPHNhtIaalAvAL 311 (477)
T KOG2467|consen 236 IPSPFE-YCDIVTTTTHKSLRGP---RGAMIFYRKGVKSIKPKQGKEILYDLEDKINFAVFPGLQGGPHNHTIAALAVAL 311 (477)
T ss_pred CCCccc-ccceeeccccccccCC---cceeEEEeccCCcCCCCCCCcceechhhhhhhhccccccCCCCcchHHHHHHHH
Confidence 667776 6999999999999877 5688887741 1 1112211111 111111111 1111
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC----CHHhHHHHHhh
Q 016612 243 CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----SLALSKHVVET 318 (386)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~----~~~~~~~l~~~ 318 (386)
-...-..+.....+..+|++.+.+.|.++.- .+..+=. -..++.+.+. +....+++++.
T Consensus 312 kQa~tpefk~Yq~qV~~Nakala~~l~~~Gy---~lvtgGT--------------DnHlvLvDLr~~G~dGarvE~vle~ 374 (477)
T KOG2467|consen 312 KQAMTPEFKEYQKQVLKNAKALASALISRGY---KLVTGGT--------------DNHLVLVDLRPKGVDGARVEKVLEL 374 (477)
T ss_pred HhhCCHHHHHHHHHHHHHHHHHHHHHHHcCc---eEecCCc--------------cceEEEEeccccCCchHHHHHHHHH
Confidence 1222334677778889999999999987651 1222211 1234555541 23456777776
Q ss_pred cCcceec-cCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--------ccCChHHHHHHHHHHHh
Q 016612 319 TKYFSIT-VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--------GIEDVNDLISDLDKALR 382 (386)
Q Consensus 319 l~~~gi~-~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--------~~~~~~~~i~~l~~~l~ 382 (386)
+.+..-. .-+|.... +.++.|||+. ..+|.++..+.|.++++
T Consensus 375 ~~I~~NKNtvpGD~Sa----------------------l~PgGiRiGtPAmTsRG~~e~df~~v~~fi~~av~ 425 (477)
T KOG2467|consen 375 CHIALNKNTVPGDKSA----------------------LSPGGIRIGTPAMTSRGFGEEDFEKVADFIDRAVK 425 (477)
T ss_pred hhhhhcCCcCCCCccc----------------------cCCCceeccchhhcccCccHHHHHHHHHHHHHHHH
Confidence 6543221 33444322 2356689875 23777777777777654
No 381
>KOG1401 consensus Acetylornithine aminotransferase [Amino acid transport and metabolism]
Probab=98.98 E-value=8.4e-08 Score=86.00 Aligned_cols=194 Identities=19% Similarity=0.235 Sum_probs=113.8
Q ss_pred CCceEEeCcHHHHHHHHHHh----cCCC---C--EEEecCCCCCc-HHHHHhhhc--ccCCc-------EEEEeCCCCHH
Q 016612 70 ADRALCFTSGMAALAAVTHL----LGTG---E--EIVAGDDLYGG-TDRLLSRVT--PKTGV-------VVKRVNTCDLD 130 (386)
Q Consensus 70 ~~~~i~~~~gt~al~~~~~~----~~~g---~--~Vlv~~~~~~~-~~~~~~~~~--~~~g~-------~~~~v~~~d~~ 130 (386)
.+.+.+..|||+|+..++.+ ...+ + .++.-+.+|++ +..++ ... ..++. +++..+..|..
T Consensus 116 ~~rvff~nsGTeAne~ALK~Ark~~~~~~~~~~t~~Iaf~nsyHG~tlgal-s~~~~s~y~~~~~p~~p~v~~~~ynd~t 194 (433)
T KOG1401|consen 116 AERVFFCNSGTEANETALKFARKFTGKKHPEKKTKFIAFENSYHGRTLGAL-SVTGNSKYGLPFDPIAPDVVTAEYNDST 194 (433)
T ss_pred ccEEEEecCCcHHHHHHHHHHHHhhcccCCccceeEEEEecCcCCcchhHH-HhhcccccCCCCCCCCCceeecccCCHH
Confidence 34678889999997633221 1111 1 36665655544 44333 211 12222 23344445899
Q ss_pred HHHhhhCC---CceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEec
Q 016612 131 EVASAIGP---WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHS 197 (386)
Q Consensus 131 ~l~~~~~~---~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S 197 (386)
++++.+.. .+.+|+++...-..|.+.. +..|..+|+++|+++|.||++.. +-.. ......+||.+
T Consensus 195 ~l~k~~~~h~~~IaAVIvEPiqGaGG~~p~~peFl~~L~k~C~~~~vl~I~DEV~tG~gR~g~~~a~e~~~~~PDI~t-- 272 (433)
T KOG1401|consen 195 ALEKLFESHKGEIAAVIVEPIQGAGGIIPADPEFLIGLRKECDDNGVLLIFDEVQTGLGRLGYGWAQEYFGVTPDITT-- 272 (433)
T ss_pred HHHHHHHhCCCceEEEEEecccCCCCcccCCHHHHHHHHHHHhhcCceEEeehhhhCccccchHHHHHHhCcCCccee--
Confidence 99998873 4699999999887777652 78899999999999999999863 2221 12234568875
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHhhh---hcCCCCChhhHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHh
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQN---AEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLA 269 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~ 269 (386)
+.|.++| |+-+|+..++ +.+.+.+..-.. ...-+.++....+....++.+ ....++..+..+.+.+.+.
T Consensus 273 ~aK~L~g--GlPigA~~v~-~kV~~~i~~~~~l~hg~Tf~gnpLacsa~~~~l~~l~~~e~~k~vs~~~k~L~~~l~ 346 (433)
T KOG1401|consen 273 VAKPLGG--GLPIGATGVR-DKVAEMISPGDHLYHGGTFSGNPLACSAGIKVLDELKDPETLKNVSKIGKELRKLLD 346 (433)
T ss_pred ehhhccC--CceeEEEeeh-HHHHhhcCCCCccccCcccCCChhhhhHHHHHHHHHcCHHHHHHHHHHHHHHHHHHH
Confidence 5999975 5778988887 446554433222 222234444444443333322 2223444444444444444
No 382
>PF05889 SLA_LP_auto_ag: Soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen); InterPro: IPR008829 This family consists of several eukaryotic and archaeal proteins which are related to the Homo sapiens soluble liver antigen/liver pancreas antigen (SLA/LP autoantigen). Autoantibodies are a hallmark of autoimmune hepatitis, but most are not disease specific. Autoantibodies to soluble liver antigen (SLA) and to liver and pancreas antigen (LP) have been described as disease specific, occurring in about 30% of all patients with autoimmune hepatitis []. The function of SLA/LP is unknown, however, it has been suggested that the protein may function as a serine hydroxymethyltransferase and may be an important enzyme in the thus far poorly understood selenocysteine pathway []. The archaeal sequences Q8TXK0 from SWISSPROT and Q8TYR3 from SWISSPROT are annotated as being pyridoxal phosphate-dependent enzymes.; GO: 0016740 transferase activity; PDB: 2E7J_B 2E7I_B 2Z67_C 3HL2_D 3BC8_A 3BCA_A 3BCB_A.
Probab=98.95 E-value=4.4e-08 Score=88.62 Aligned_cols=153 Identities=13% Similarity=0.100 Sum_probs=100.8
Q ss_pred hhcCCC---ceEEeCcHH-HHHH-HHHHhc--CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--------CHH
Q 016612 66 KLDKAD---RALCFTSGM-AALA-AVTHLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--------DLD 130 (386)
Q Consensus 66 ~~~g~~---~~i~~~~gt-~al~-~~~~~~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--------d~~ 130 (386)
+..|.. .+++++-.| .++. +++++- ..++.|+.+.-.|.+.+ ..+...|.+++.++.. |.+
T Consensus 67 ~~~G~~~~~~~~~vP~atgm~l~l~l~~l~~r~~a~~Viw~ridqkSc~----kai~~AGl~~~vV~~~~~~d~l~td~~ 142 (389)
T PF05889_consen 67 RLAGLRSVKSCFVVPMATGMSLTLCLLALRMRPKAKYVIWPRIDQKSCF----KAIERAGLEPVVVENVLEGDELITDLE 142 (389)
T ss_dssp HHTTHTTHCEEEEESS-HHHHHHHHHHHHHHHCT--EEEEEEEETHHHH----HHHHHTT-EEEEE-EEEETTEEEEHHH
T ss_pred HHcCCccccceEEEecccccHHHHHHHHHhcccCCceEEEeeccccchH----HHHHhcCCeEEEeeccCCCCeeeccHH
Confidence 334654 467776655 4454 333332 46788999988887665 5556789998888852 667
Q ss_pred HHHhhhC---CCceEEEEeCCCCCCccccc-HHHHHHHHHHcCCEEEEeCCCCCCCc------cCCCCC-CccEEEeccc
Q 016612 131 EVASAIG---PWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPVL------SRPLEL-GADIVMHSAT 199 (386)
Q Consensus 131 ~l~~~~~---~~~~~v~~~~~~nptG~~~~-l~~i~~la~~~~~~li~D~a~~~~~~------~~~~~~-~~di~~~S~s 199 (386)
.+++.++ ++..+.++++++...+...| +++|+++|+++|++.++..||+.-.. ...... ..|+++.|+-
T Consensus 143 ~ie~~i~~~G~~~iLcvltttscfapr~~D~i~~IakiC~~~~IPhlvNnAYgvQ~~~~~~~i~~a~~~GRvda~vqS~d 222 (389)
T PF05889_consen 143 AIEAKIEELGADNILCVLTTTSCFAPRLPDDIEEIAKICKEYDIPHLVNNAYGVQSSKCMHLIQQAWRVGRVDAFVQSTD 222 (389)
T ss_dssp HHHHHHHHHCGGGEEEEEEESSTTTTB----HHHHHHHHHHHT--EEEEGTTTTT-HHHHHHHHHHHHHSTCSEEEEEHH
T ss_pred HHHHHHHHhCCCCeEEEEEecCccCCCCCccHHHHHHHHHHcCCceEEccchhhhHHHHHHHHHHHHhcCCcceeeeecC
Confidence 7776664 46678888888888889887 99999999999999999999985221 111122 3589999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHH
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKEL 224 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~ 224 (386)
|.|-.|.| ++.+++.++......
T Consensus 223 kNF~VPvG--gai~As~~~~~i~~v 245 (389)
T PF05889_consen 223 KNFMVPVG--GAIMASFDPSGILAV 245 (389)
T ss_dssp HHHCEESS--HEEEEESSHHHHHHH
T ss_pred CCEEecCC--CcEEEecCHHHHHHH
Confidence 99988877 777887776555433
No 383
>KOG1411 consensus Aspartate aminotransferase/Glutamic oxaloacetic transaminase AAT1/GOT2 [Amino acid transport and metabolism]
Probab=98.86 E-value=1.1e-07 Score=83.28 Aligned_cols=237 Identities=15% Similarity=0.106 Sum_probs=134.7
Q ss_pred EeCcHHHHHH---HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhC--CCceE
Q 016612 75 CFTSGMAALA---AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG--PWTKL 142 (386)
Q Consensus 75 ~~~~gt~al~---~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~--~~~~~ 142 (386)
-+-|||.|+. .+++..-++..|.+|+|+|+.+. .+.+..|+.+..+..- |.+.+.+.+. +.-..
T Consensus 125 Q~lSGTGaLriga~Fl~~f~~~~~I~ip~PTWgNh~----~if~~ag~~~~~yrYyd~~t~gld~~g~ledl~~~p~gs~ 200 (427)
T KOG1411|consen 125 QTLSGTGALRVGAEFLARFYPSRDIYIPDPTWGNHK----NIFKDAGLPVKFYRYYDPKTRGLDFKGMLEDLGEAPEGSI 200 (427)
T ss_pred EeccCcchhhHHHHHHHhhccccceeecCCcccccC----ccccccCcceeeeeeccccccccchHHHHHHHhcCCCCcE
Confidence 3457887764 34554556889999999998874 6677888877665532 5555554444 22234
Q ss_pred EEE-eCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCccCCCC----------C-CccEEEeccccccccCCC
Q 016612 143 VWV-ESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLE----------L-GADIVMHSATKFIAGHSD 207 (386)
Q Consensus 143 v~~-~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~----------~-~~di~~~S~sK~~~g~~g 207 (386)
|++ -..|||||.-. .+++|.++.++.+.+-+.|.+|......+... . +..+++.|+.|.++- -|
T Consensus 201 ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmAYQGfaSG~~d~DA~avR~F~~~g~~~~laQSyAKNMGL-Yg 279 (427)
T KOG1411|consen 201 ILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMAYQGFASGDLDKDAQAVRLFVEDGHEILLAQSYAKNMGL-YG 279 (427)
T ss_pred EEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhhhcccccCCchhhHHHHHHHHHcCCceEeehhhhhhcch-hh
Confidence 444 36699999875 37889999999999999999986544332211 1 235889999999854 44
Q ss_pred ceEEEE--EEcChhHHHH----HHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCC
Q 016612 208 VMAGVL--AVKGERLAKE----LYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAG 281 (386)
Q Consensus 208 ~~~G~i--~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 281 (386)
-|+|.+ ++++.+.... ++.+.+..-++.+-..+.....-+.. .....++....+.+.+.+...+ +.+.+.
T Consensus 280 ERvGa~svvc~~ad~A~rV~SQlk~liRpmYSnPP~hGArIv~~Il~d-~~l~~~W~~evk~MadRi~~mR---~~L~d~ 355 (427)
T KOG1411|consen 280 ERVGALSVVCKDADEAKRVESQLKILIRPMYSNPPLHGARIVATILSD-PDLKNQWLGEVKGMADRIISMR---QQLFDA 355 (427)
T ss_pred hccceeEEEecCHHHHHHHHHHHHHHhcccccCCCccchhhhhhccCC-hHHHHHHHHHHHHHHHhhhhhH---HHHhHH
Confidence 577764 6665544332 33333322222222222222222222 2223344444444444444332 222222
Q ss_pred CCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc
Q 016612 282 LPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY 321 (386)
Q Consensus 282 l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 321 (386)
|....... -|.....+.+||+|.--+++..+.+..+..+
T Consensus 356 L~~~gs~~-~W~hI~~QIGMF~fTgl~peQv~~l~ke~~i 394 (427)
T KOG1411|consen 356 LEKEGSPG-NWSHITKQIGMFCFTGLNPEQVDWLTKEYHI 394 (427)
T ss_pred hhcCCCCc-cHHHHHHhhheeeecCCCHHHHHHHHhhhee
Confidence 22111111 1222234678999987666667777776554
No 384
>KOG0629 consensus Glutamate decarboxylase and related proteins [Amino acid transport and metabolism]
Probab=98.75 E-value=3.4e-07 Score=82.44 Aligned_cols=228 Identities=14% Similarity=0.140 Sum_probs=149.0
Q ss_pred CCCCCCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHHHHHHh---cCC-----C-----CEEE-ecC
Q 016612 41 ATENGPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGM-AALAAVTHL---LGT-----G-----EEIV-AGD 100 (386)
Q Consensus 41 ~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~~~~~~---~~~-----g-----~~Vl-v~~ 100 (386)
+.+...+-|.-. .-- .-+++-..+.++.|.+ +.|+.++|+ +.++++... .-| | +-|+ +++
T Consensus 125 t~Ntn~~TYEiAPvF~lmE~~vl~km~~ivGw~~~~DgIf~pggsisn~Ya~~~Aryk~~Pe~K~~Gm~~~p~lilFtSe 204 (510)
T KOG0629|consen 125 TANTNMFTYEIAPVFVLMEEEVLAKMREIVGWEEGGDGIFAPGGSISNMYAMNCARYKNFPEVKTKGMFALPPLILFTSE 204 (510)
T ss_pred ccCCCCceEEecceEEeehHHHHHHHHHHhCCCCCCCceecCCchhHHHHHHHHHHhhcCchhhhhhhhcCCcEEEEecc
Confidence 334444555443 222 3455666677777765 678888887 767765432 111 1 3344 777
Q ss_pred CCCCcHHHHHhhhcccCC---cEEEEeCCC-----CHHHHHhhhC---CC---ceEEEEeCCCCCCcccccHHHHHHHHH
Q 016612 101 DLYGGTDRLLSRVTPKTG---VVVKRVNTC-----DLDEVASAIG---PW---TKLVWVESPTNPRQQICDIRKIAEMAH 166 (386)
Q Consensus 101 ~~~~~~~~~~~~~~~~~g---~~~~~v~~~-----d~~~l~~~~~---~~---~~~v~~~~~~nptG~~~~l~~i~~la~ 166 (386)
.+|.+... .+...| -.++.|+++ ++++|++.+- ++ +-.|-.+..+...|...|+..|+++|+
T Consensus 205 esHYSi~k----aAa~lg~gtd~c~~v~t~e~Gkm~~~dLe~kile~k~kg~~Pf~vnaTaGTTV~GAFDdL~~iadiC~ 280 (510)
T KOG0629|consen 205 ESHYSIKK----AAAFLGLGTDHCIKVKTDERGKMIPDDLEKKILEAKAKGGVPFFVNATAGTTVLGAFDDLNGIADICE 280 (510)
T ss_pred cchhhHHH----HHHHhccCCceeEEecccccCccchHHHHHHHHHHHhcCCCCeEEEecCCceeeeccCcHHHHHHHHH
Confidence 78888764 333444 566777765 7899998875 23 445555677778888899999999999
Q ss_pred HcCCEEEEeCCCCCCCccCCC-------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHH------hh-----
Q 016612 167 AHGALLLVDNSIMSPVLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF------LQ----- 228 (386)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~------~~----- 228 (386)
+|++++++|++++.|.+-+.. -..++-+.-+.||+++.| +.++....+.+-+.+.... ++
T Consensus 281 k~~lWmHvDAAwGGglLmS~k~R~kl~Giera~SvtwnpHK~~gap--lqCsa~l~r~~gll~~Cn~~~A~YLFq~dK~Y 358 (510)
T KOG0629|consen 281 KHKLWMHVDAAWGGGLLMSRKHRHKLTGIERANSVTWNPHKLMGAP--LQCSAFLTREEGLLQRCNQMSAIYLFQQDKFY 358 (510)
T ss_pred hcCEEEEeecccccccccChhhHhhccCccccCceeecHHHhhcCc--chhhHHHHHHHHHHHhhcccchhhhhccCcee
Confidence 999999999999887654221 124688899999999765 4577777665543322110 00
Q ss_pred ----------hhcCCCCChhhHHHHH--hcCCcHHHHHHHHHHHHHHHHHHHhhCCCc
Q 016612 229 ----------NAEGSGLAPFDCWICL--RGVKTMALRVEKQQDNAQKIAEFLASHPRV 274 (386)
Q Consensus 229 ----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 274 (386)
...|....-+..|++. .+...+....+...++++.+.+.++++...
T Consensus 359 dvS~DTgdK~iQCGRh~D~FKlWlmwkaKG~~Gfe~~v~k~~~lA~yl~~~lrer~~~ 416 (510)
T KOG0629|consen 359 DVSYDTGDKAIQCGRHVDVFKLWLMWKAKGTQGFEAQVDKCLRLAEYLYDRLREREGF 416 (510)
T ss_pred ecccccccchhhcCccccHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 0112344556667764 456677888888889999999999987653
No 385
>KOG0628 consensus Aromatic-L-amino-acid/L-histidine decarboxylase [Amino acid transport and metabolism]
Probab=98.74 E-value=1.1e-06 Score=80.14 Aligned_cols=253 Identities=16% Similarity=0.213 Sum_probs=140.7
Q ss_pred cccCCCCchHHHHH----HHHHhhcCCC-----------ceEEeCcHHHHH-HHHHHh-------cCCC-----------
Q 016612 48 DYTRSGNPTRDALE----SLLAKLDKAD-----------RALCFTSGMAAL-AAVTHL-------LGTG----------- 93 (386)
Q Consensus 48 ~y~~~g~~~~~~l~----~~l~~~~g~~-----------~~i~~~~gt~al-~~~~~~-------~~~g----------- 93 (386)
+++....|...++| +|++++.+.+ -.++.++.+++. -++++. ++.+
T Consensus 102 GFtW~ssPa~TELE~ivmDWL~kml~LP~~Fl~~~~g~GgGviQ~tases~lvallaaR~~~i~~~k~~~p~~~e~~~~~ 181 (511)
T KOG0628|consen 102 GFTWASSPACTELEVIVMDWLGKMLGLPAEFLSLGLGDGGGVIQGTASESVLVALLAARTEKIEEIKSRPPELHESSVLA 181 (511)
T ss_pred cceeecCcchHHHHHHHHHHHHHHhcCcHHHhccCCCCCcceEecCcchhHHHHHHHHHHHHHHHhhcCCCcccchhhhh
Confidence 33444445555555 6666655432 367777777664 344331 2222
Q ss_pred C-EEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCCC-----ceEEEE-eCCCCCCcccccHHHH
Q 016612 94 E-EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPW-----TKLVWV-ESPTNPRQQICDIRKI 161 (386)
Q Consensus 94 ~-~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~~-----~~~v~~-~~~~nptG~~~~l~~i 161 (386)
+ .+..++..|.+.. +.+...+++++.++.+ +.+.|++++.++ +..+++ +-.+.-+-...++.+|
T Consensus 182 ~lV~Y~SDqahssve----ka~~i~~VklR~l~td~n~~mr~~~L~~AIe~D~arGlIPf~v~at~GTT~~ca~D~l~el 257 (511)
T KOG0628|consen 182 RLVAYCSDQAHSSVE----KACLIAGVKLRALPTDENFGMRGDTLRKAIEEDIARGLIPFFVCATLGTTSSCAFDELEEL 257 (511)
T ss_pred hheEEecCcccchHH----HhHhhcceeEEEeecccCcCCCHHHHHHHHHHHHhCCCccEEEEEeecCccccccccHHHh
Confidence 1 3457788888774 6666778888888765 677888887632 223333 3222222233479999
Q ss_pred HHHHHHcCCEEEEeCCCCCCCccCC----CCC---CccEEEeccccccccCCCceEEEEEEcChh-HHH---------H-
Q 016612 162 AEMAHAHGALLLVDNSIMSPVLSRP----LEL---GADIVMHSATKFIAGHSDVMAGVLAVKGER-LAK---------E- 223 (386)
Q Consensus 162 ~~la~~~~~~li~D~a~~~~~~~~~----~~~---~~di~~~S~sK~~~g~~g~~~G~i~~~~~~-~~~---------~- 223 (386)
..+|+++|+++++|++|+...+..+ +.. .+|-+.+..|||+...-. +..++.++.. +.+ +
T Consensus 258 g~Vc~~~glWLHVDAAYAGsa~iCpE~r~l~rGie~aDSfn~n~hK~~~vnfD--Cs~lWvkd~~~~~~~~~vdp~yL~h 335 (511)
T KOG0628|consen 258 GPVCREEGLWLHVDAAYAGSAFICPEFRYLMRGIEYADSFNFNPHKWLLVNFD--CSPLWVKDGTKLSRAFNVDPLYLKH 335 (511)
T ss_pred cchhhhcCEEEEeehhhccccccCHHHHHHhhcchhhccccCChhheeEEeee--eecceeecCceeeeeeecChHhhcc
Confidence 9999999999999999986654422 111 358888999998865443 4555555441 100 0
Q ss_pred --------HHHhhhhcCCCCChhhHHHHHhc--CCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhh
Q 016612 224 --------LYFLQNAEGSGLAPFDCWICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 293 (386)
Q Consensus 224 --------~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~ 293 (386)
++.++...+...-....|..++. .+.+..++++..+.++...+.+.+-+.. ++..
T Consensus 336 ~~~~~~~Dyrhwqipl~rRfRSLKlWfv~R~~Gve~lq~~iR~h~~La~~fe~lv~~d~~F-E~~~-------------- 400 (511)
T KOG0628|consen 336 AYQGSAPDYRHWQIPLGRRFRSLKLWFVLRSYGVENLQNYIREHVRLAKEFETLVRADPRF-EIVN-------------- 400 (511)
T ss_pred hhhccCCCccccccccccchhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhhcCCcc-eeec--------------
Confidence 11122222333333444554442 2334444444444444444444433211 1100
Q ss_pred ccCCCCceEEEEe-CCHHhHHHHHhhcCcce
Q 016612 294 QAKGAGSVLSFLT-GSLALSKHVVETTKYFS 323 (386)
Q Consensus 294 ~~~~~~~~~~~~~-~~~~~~~~l~~~l~~~g 323 (386)
+..-++++|++ ++....+++++++...|
T Consensus 401 --~~~lgLvcFRlk~~N~~ne~Ll~~in~~g 429 (511)
T KOG0628|consen 401 --KRILGLVCFRLKGDNEINEALLNRLNSSG 429 (511)
T ss_pred --ccccceeEEeecCCcHHHHHHHHHHHhcC
Confidence 11236789988 44456778888776544
No 386
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.73 E-value=7.1e-07 Score=84.29 Aligned_cols=149 Identities=21% Similarity=0.250 Sum_probs=111.7
Q ss_pred CCc-hHHHHHHHHHhhcCCCceEE-eCcHHHH----HHHHHHhc-CCCC----EEEecCCCCCcHHHHHhhhcccCCcEE
Q 016612 53 GNP-TRDALESLLAKLDKADRALC-FTSGMAA----LAAVTHLL-GTGE----EIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (386)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~~~~i~-~~~gt~a----l~~~~~~~-~~g~----~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 121 (386)
|.. +..+++++|++++|.|...+ -+||+++ +.++.+.+ .+|+ ..++|-..|+... ..+.-.|.++
T Consensus 579 GY~~lf~~Le~~Lc~iTG~D~~s~QPNsGA~GEYaGL~~IRaY~~~kge~hRnvClIPvSAHGTNP----ASA~Magmkv 654 (1001)
T KOG2040|consen 579 GYQQLFTELEKDLCEITGFDSFSLQPNSGAQGEYAGLRVIRAYLESKGEGHRNVCLIPVSAHGTNP----ASAAMAGMKV 654 (1001)
T ss_pred hHHHHHHHHHHHhheeecccceeecCCCCcccchhhHHHHHHHHHhccCCcceeEEEeecccCCCh----hhHHhcCCEE
Confidence 443 67889999999999996544 4667644 44555543 3443 4577777887764 5566789999
Q ss_pred EEeCCC-----CHHHHHhhhC---CCceEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEeCCCCCCC--ccCCCCCC
Q 016612 122 KRVNTC-----DLDEVASAIG---PWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPV--LSRPLELG 190 (386)
Q Consensus 122 ~~v~~~-----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~~~li~D~a~~~~~--~~~~~~~~ 190 (386)
+.|.++ |..+|.++.. ++-.+++++.|+.. |... .++++.++.++||..+..|++-.... +-++.+.|
T Consensus 655 vpV~~~~~G~id~~dLk~kaekh~~~Laa~MvTYPST~-GvfE~~i~d~cd~iHehGGQVYlDGANMNAqVGlc~pGd~G 733 (1001)
T KOG2040|consen 655 VPVGCDANGNIDMVDLKAKAEKHKDNLAALMVTYPSTH-GVFEEGIDDICDIIHEHGGQVYLDGANMNAQVGLCRPGDIG 733 (1001)
T ss_pred EEeeccCCCCccHHHHHHHHHHhhhhhheeEEeccccc-ccccccHHHHHHHHHhcCCEEEecCCCccceecccCCcccc
Confidence 998875 7777776654 57789999999984 5554 69999999999999999999965432 33577889
Q ss_pred ccEEEeccccccccCC
Q 016612 191 ADIVMHSATKFIAGHS 206 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~ 206 (386)
+|+.--.+||+|+-|.
T Consensus 734 aDV~HLNLHKTFcIPH 749 (1001)
T KOG2040|consen 734 ADVCHLNLHKTFCIPH 749 (1001)
T ss_pred ccceeecccceeeecC
Confidence 9999999999886443
No 387
>COG3033 TnaA Tryptophanase [Amino acid transport and metabolism]
Probab=98.73 E-value=1.9e-06 Score=76.17 Aligned_cols=213 Identities=18% Similarity=0.109 Sum_probs=127.6
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-h-----cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-L-----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~-----~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
|+.....+++.+.+++|.+..+.+.-|..|=+.+.. + ..||.+.++++..|+.+-+. -.+..|..++.+..
T Consensus 77 gsrs~~~L~~avkdifGfq~~iPthQGRgAE~Il~~i~ik~~~~~pg~~~~~~sN~~FdTTr~---h~~~ng~~~~n~~~ 153 (471)
T COG3033 77 GSRSYYALADAVKDIFGFQYTIPTHQGRGAENILIPILIKKGEQEPGSKMVAFSNYHFDTTRG---HIQINGATPRNVYV 153 (471)
T ss_pred ccccHHHHHHHHHHhcCceeeeeccCCccHHHHHHHHHhhhccccCCccccccccceecchhH---HHHhcCCccccccc
Confidence 444567888999999999888888888755332222 2 34666666666777666432 23455555444332
Q ss_pred C---------------CHHHHHhhhC----CCceEEEEeCCCCCCcccc----cHHHHHHHHHHcCCEEEEeCCCC-CC-
Q 016612 127 C---------------DLDEVASAIG----PWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIM-SP- 181 (386)
Q Consensus 127 ~---------------d~~~l~~~~~----~~~~~v~~~~~~nptG~~~----~l~~i~~la~~~~~~li~D~a~~-~~- 181 (386)
+ |++.|++.++ +++..|+++-.+|..|.-. +++++.++|++|++.++.|.+.. ..
T Consensus 154 ~ea~d~~~~~pFKGd~D~~kLe~lidevG~~nvp~I~~tiT~NsagGQpVSm~n~r~v~~ia~ky~ipvv~Da~RfaENa 233 (471)
T COG3033 154 DEAFDTEVKYPFKGNFDLEKLERLIDEVGADNVPYIVLTITNNSAGGQPVSMANMKAVYEIAKKYDIPVVMDAARFAENA 233 (471)
T ss_pred cccccccccCCCCCccCHHHHHHHHHHhCcccCcEEEEEEeccccCCCcchHHhHHHHHHHHHHcCCcEEeehhhhhhhh
Confidence 1 8899999887 5677888776666555442 58999999999999999999942 11
Q ss_pred CccCCC----------------CCCccEEEeccccccccCCCceEEEEEEcChh---HHHHHHHhhhhc-----CCCCCh
Q 016612 182 VLSRPL----------------ELGADIVMHSATKFIAGHSDVMAGVLAVKGER---LAKELYFLQNAE-----GSGLAP 237 (386)
Q Consensus 182 ~~~~~~----------------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~---~~~~~~~~~~~~-----~~~~~~ 237 (386)
++.... -..+|-.++|.-|--..+ ++|++..+++. +...++...... -.+++.
T Consensus 234 YFIk~rE~gYrd~sI~~IarEm~sYaD~~~mS~KKD~lvn---mGGfl~~~D~~~fDvy~~~~~~~V~~eG~~tYGgl~G 310 (471)
T COG3033 234 YFIKQREPGYRDWSIEEIAREMYSYADGCTMSAKKDGLVN---MGGFLCFKDDSFFDVYEECRTLVVVQEGFPTYGGLAG 310 (471)
T ss_pred hhhhhcCcccccccHHHHHHHHHhhhhhheeeccccceec---cccEEEecCccHHHHHHHHHhheEeeccccccCcccc
Confidence 111110 124688999999964343 47999999874 333333322111 112333
Q ss_pred hhHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHhhC
Q 016612 238 FDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 238 ~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (386)
-...++..++..- ...+....+..+.|.+.|.+.
T Consensus 311 rdmealAvGL~e~~~~~yl~~Rv~Qv~YL~~~l~~~ 346 (471)
T COG3033 311 RDMEALAVGLREGVNFDYLAHRVAQVQYLADGLEEA 346 (471)
T ss_pred hhHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhc
Confidence 2222222222210 222334456666777777765
No 388
>KOG3846 consensus L-kynurenine hydrolase [Amino acid transport and metabolism]
Probab=98.59 E-value=1.6e-06 Score=74.99 Aligned_cols=157 Identities=14% Similarity=0.153 Sum_probs=109.1
Q ss_pred HHHHHHhhcCCC-ceEEe-CcHHHHHH-HHHHhcCC---CCEEEecCCCCCcHHHHHhhhcccCCcEEE----EeCCC--
Q 016612 60 LESLLAKLDKAD-RALCF-TSGMAALA-AVTHLLGT---GEEIVAGDDLYGGTDRLLSRVTPKTGVVVK----RVNTC-- 127 (386)
Q Consensus 60 l~~~l~~~~g~~-~~i~~-~~gt~al~-~~~~~~~~---g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~----~v~~~-- 127 (386)
+-..++.+.|+. +++.+ ++=|..++ ++.++.+| .-+|+...-.|++-..++.+.++..|+.+. .+.+.
T Consensus 116 il~l~~~iVGA~e~EvavmNsLTvNlh~Ll~sFyKPTekR~KILlE~kaFPSDhYAiesQ~~lhG~~~e~sm~~iePREG 195 (465)
T KOG3846|consen 116 ILPLLAPIVGAQENEVAVMNSLTVNLHSLLISFYKPTEKRFKILLEKKAFPSDHYAIESQCKLHGISPENSMIQIEPREG 195 (465)
T ss_pred hhhhhhhhccCCchhhhhHhhhhhHHHHHHHHhcCCcchhhhhhhccCCCCchHHHHHhhhhhcCCChHHheEEeccccc
Confidence 334455555654 34433 33355566 44556665 456888888888877777888888887532 22221
Q ss_pred ----CHHHHHhhhC---CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC-CCCCCccEEEeccc
Q 016612 128 ----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSAT 199 (386)
Q Consensus 128 ----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-~~~~~~di~~~S~s 199 (386)
..+++.+.+. +...+|+++..+..||..+++.+|...-+..|+++-.|-+++.+-.+- .-++|.|+.|-..+
T Consensus 196 EetlRteDILd~IEkngDeiA~v~fSGvqyYTGQ~Fdi~aIT~Agq~kgc~VGfDLAHAvgNVpL~LHdWgVDFACWCSY 275 (465)
T KOG3846|consen 196 EETLRTEDILDTIEKNGDEIALVCFSGVQYYTGQYFDIGAITFAGQFKGCLVGFDLAHAVGNVPLQLHDWGVDFACWCSY 275 (465)
T ss_pred ccchhHHHHHHHHHhcCCeEEEEEeecceeecccccchhhhhhcccCCCcEechhhhhhhcCCceEEeecCCceEEEeee
Confidence 3344544443 578899999999999999999999977777899999999998776542 33679999999999
Q ss_pred cccccCCCceEEEEEEc
Q 016612 200 KFIAGHSDVMAGVLAVK 216 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~ 216 (386)
|++...+|-.+|..+..
T Consensus 276 KYlnaGaGgIgGlFvHe 292 (465)
T KOG3846|consen 276 KYLNAGAGGIGGLFVHE 292 (465)
T ss_pred cccccCCCccceeeeeh
Confidence 99874444456666654
No 389
>KOG1405 consensus 4-aminobutyrate aminotransferase [Amino acid transport and metabolism]
Probab=98.54 E-value=1.8e-06 Score=76.03 Aligned_cols=204 Identities=16% Similarity=0.208 Sum_probs=121.2
Q ss_pred HHHHHhhhC------CCceEEEEeCCCCCCcccc--c--HHHHHHHHHHcCCEEEEeCCCCCC----CccC----CCCCC
Q 016612 129 LDEVASAIG------PWTKLVWVESPTNPRQQIC--D--IRKIAEMAHAHGALLLVDNSIMSP----VLSR----PLELG 190 (386)
Q Consensus 129 ~~~l~~~~~------~~~~~v~~~~~~nptG~~~--~--l~~i~~la~~~~~~li~D~a~~~~----~~~~----~~~~~ 190 (386)
++++++.+. ..+.+++++..+...|.-. | ++.|.+++++||+.+|+||++..+ .+.. .+...
T Consensus 255 l~~Ve~li~~~~~k~~pVaaiIvEPIQsEGGDnhaSp~Ff~kLrdi~~Kh~v~fivDEVQTGgGaTGk~WaHehw~l~~P 334 (484)
T KOG1405|consen 255 LAEVEDLIVKYRKKKKPVAAIIVEPIQSEGGDNHASPDFFRKLRDITKKHGVAFIVDEVQTGGGATGKFWAHEHWNLDSP 334 (484)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEeechhccCCCccCCHHHHHHHHHHHHhcCeEEEeeeeecCCCccCceeeehhcCCCCC
Confidence 566666664 2457888888888777664 2 799999999999999999998632 2221 12335
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhHH--HHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLA--KELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 268 (386)
.|++++ ||-|-. +|+... +++. +..+.+.+ +...+....++....+ ....+.+.++...+.++|
T Consensus 335 pD~vTF--SKK~q~-----gGffh~--~~frpn~pYrifNT---WmGdP~k~lll~~vv~--~I~~~~Ll~n~~~vG~~l 400 (484)
T KOG1405|consen 335 PDVVTF--SKKFQT-----GGFFHD--EEFRPNEPYRIFNT---WMGDPSKNLLLEEVVQ--EIKREDLLNNVAHVGKAL 400 (484)
T ss_pred ccceeh--hhhhhc-----CccccC--cccCCCchHHHhhh---hcCChHHHHHHHHHHH--HHhHHHHHHHHHHHHHHH
Confidence 688865 676532 365442 2221 12222222 2223333332222222 223356667776666665
Q ss_pred hhCCCcceEecCCC-CCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCC
Q 016612 269 ASHPRVKKVNYAGL-PEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 347 (386)
Q Consensus 269 ~~~~~~~~~~~~~l-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~ 347 (386)
.+.-. .| +..|+. ....+|+|.+++|.+++....++++..++.+|+.+.. +
T Consensus 401 ~~gL~-------~Lq~~~p~~---~~~~RGrGTF~a~d~ps~~~Rdk~i~~~~~nGv~~GG--C---------------- 452 (484)
T KOG1405|consen 401 LKGLL-------ELQAKYPGK---INNLRGRGTFIAWDCPSGSIRDKLILIARLNGVNLGG--C---------------- 452 (484)
T ss_pred HHHHH-------HHHHhCchh---hhcccccceEEEEeCCChHHHHHHHHHHHHcCceecc--c----------------
Confidence 53210 01 111111 1223678999999999999899999999999886432 2
Q ss_pred HHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 348 VEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 348 ~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
++.-||+-.+ ..+.+-+++.+.+.|..
T Consensus 453 ---------g~~siRfRPsLvf~~~Ha~i~l~~~~k~l~~ 483 (484)
T KOG1405|consen 453 ---------GDKSIRFRPSLVFRKHHADIFLDIFDKILAG 483 (484)
T ss_pred ---------ccceeeeccceeehhhhHHHHHHHHHHHhcc
Confidence 1222666554 37777788888877753
No 390
>KOG1403 consensus Predicted alanine-glyoxylate aminotransferase [General function prediction only]
Probab=98.37 E-value=5.1e-06 Score=71.64 Aligned_cols=283 Identities=17% Similarity=0.194 Sum_probs=152.4
Q ss_pred HHHHHHhhcCCCceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHHHhhh----ccc----CCcEEEEeCC-C
Q 016612 60 LESLLAKLDKADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRV----TPK----TGVVVKRVNT-C 127 (386)
Q Consensus 60 l~~~l~~~~g~~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~----~~~----~g~~~~~v~~-~ 127 (386)
.+...+.+-+.+-+++++||++|..+.+++ ..+-..|++.+..|++.....-.+ +.. ..-+.+++.+ .
T Consensus 92 A~~l~stlPeLsvc~F~NSGSEANDLALRLAR~ftkhqDvItldHAYHGHl~s~mE~SPYKF~~g~~v~kpd~VHVAPcP 171 (452)
T KOG1403|consen 92 ARTLTSTLPELSVCFFVNSGSEANDLALRLARNFTKHQDVITLDHAYHGHLQSVMEVSPYKFNQGGGVAKPDYVHVAPCP 171 (452)
T ss_pred HHHHhhcCCCceEEEEecCCchhhHHHHHHHHhhcccCceEEEechhccceeeeeeccceeccCCCCcCCCceeEecCCc
Confidence 333333444444678889999997654443 233344666666676553211000 000 0112333321 1
Q ss_pred ---------------C-----HHHHHhhhC------CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCC
Q 016612 128 ---------------D-----LDEVASAIG------PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 128 ---------------d-----~~~l~~~~~------~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a 177 (386)
| .+.+++.+. ..+.+.+.++.++-.|.+.| .+++++..+.+|.+.|.||+
T Consensus 172 DvyrGK~r~~~~~~a~~~~~Yad~vk~I~~d~~~~g~gvAAfiAEslQSCGGQiiPPagYFq~Va~~Vr~aGGv~IaDEV 251 (452)
T KOG1403|consen 172 DVYRGKFRDKMYPDADMGALYADPVKEICQDQLAKGQGVAAFIAESLQSCGGQIIPPAGYFQAVADAVRSAGGVCIADEV 251 (452)
T ss_pred cccccccccccCCcccchhhhhhHHHHHHHHHHhcCCcHHHHHHHHHHhcCCcccCchhHHHHHHHHHhcCCCeEEeehh
Confidence 1 122333322 35566777777887888876 78899999999999999999
Q ss_pred CCC-CCc----cC--CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh--hhhcCCCCChhhHHHHHhcCC
Q 016612 178 IMS-PVL----SR--PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCWICLRGVK 248 (386)
Q Consensus 178 ~~~-~~~----~~--~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 248 (386)
+.. |-. .. ....-.||++ +.|-++- |-.++.++.. +++.+.+... .+....+.++.+.+..+..++
T Consensus 252 QvGFGRvG~hyWafq~y~fiPDIVt--mgKpmGN--GhPVa~Vatt-keIA~Af~atgv~YFNTyGGnPVsCAv~laVm~ 326 (452)
T KOG1403|consen 252 QVGFGRVGSHYWAFQTYNFIPDIVT--MGKPMGN--GHPVAAVATT-KEIAQAFHATGVEYFNTYGGNPVSCAVGLAVMR 326 (452)
T ss_pred hhcccccchhhhhhhhhccccchhe--ecccCCC--CCeeeEEecc-HHHHHHhccccceehhccCCCchhHHHHHHHHH
Confidence 742 222 11 1123468885 5887742 2237888776 5576655331 122223445555655555444
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe--------CCHHhHHHHHhhcC
Q 016612 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT--------GSLALSKHVVETTK 320 (386)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~l~ 320 (386)
. ..-++++++++.+..+|.....-.+...+.+.+ .++-|.++.+.+ ++...+..+..+++
T Consensus 327 v--~e~E~Lq~ha~~vG~~L~~lL~~~k~kh~~IGD----------vRGvGLFiGIdLVkD~~tRtP~tk~A~~~v~rlk 394 (452)
T KOG1403|consen 327 V--CEDENLQEHAQQVGEKLEVLLRRLKQKHECIGD----------VRGVGLFIGIDLVKDRKTRTPDTKEAHWVVNRLK 394 (452)
T ss_pred H--HhhhhHHHHHHHHHHHHHHHHHHHhhhccceec----------cccceEEEeeeeecccccCCCcHHHHHHHHHHHH
Confidence 2 233667778877777666421000111222322 255666666664 34455666666665
Q ss_pred cc-eec-cCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHH
Q 016612 321 YF-SIT-VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKAL 381 (386)
Q Consensus 321 ~~-gi~-~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l 381 (386)
+. ++. ...|.......... -++|..++.++.+..|.+.|
T Consensus 395 e~y~VLlsaDGPh~NilKiKP----------------------PmCFneena~e~v~~ld~iL 435 (452)
T KOG1403|consen 395 ELYRVLLSADGPHRNILKIKP----------------------PMCFNEENADEFVLGLDEIL 435 (452)
T ss_pred HhhhEEEecCCCCCceeecCC----------------------CcccChhhHHHHHHHHHHHH
Confidence 54 344 34455433322110 05677788888887777665
No 391
>COG1932 SerC Phosphoserine aminotransferase [Coenzyme metabolism / Amino acid transport and metabolism]
Probab=98.35 E-value=3.2e-05 Score=69.10 Aligned_cols=273 Identities=18% Similarity=0.170 Sum_probs=152.8
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCcHH-HHHH-HHHHhcCCCCE--EEecCCCCCcHHHHHhhhcccCCcEEEEeCC--
Q 016612 56 TRDALESLLAKLDKAD---RALCFTSGM-AALA-AVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~gt-~al~-~~~~~~~~g~~--Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-- 126 (386)
...+.++.+.++++.+ ++++..+|. .... +.+.++.++.. |.. ..|.... ...++..+..+...+.
T Consensus 51 v~~~a~~~lreLl~iPd~Y~VlflqGGat~qf~~~p~nLl~~~~~~yv~~--g~Ws~~a---~~eA~~~~~~~~~~~~~~ 125 (365)
T COG1932 51 VLEEAEKDLRELLNIPDDYKVLFLQGGATGQFAMAPMNLLGKRGTDYVDT--GAWSEFA---IKEAKKVGKQPKLIDARI 125 (365)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCccHHHHHHHHHhhhcccCceeEee--eehhHhH---HHHHHHhcccccccccce
Confidence 5778889999999886 355555554 5555 45667765543 333 2332221 1223333321111111
Q ss_pred --------CCHHHHHhhhCCCceEEEEeCCCCCCccccc-HHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEec
Q 016612 127 --------CDLDEVASAIGPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHS 197 (386)
Q Consensus 127 --------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~-l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S 197 (386)
.+++.+. +.++..-|.+++-..-+|.-.+ ...+. . +.++++|.+....... ..-...|++.++
T Consensus 126 ~~~~~~~iP~~~~~~--~~~~~ayv~~~~NeTi~Gv~v~~~p~~~---~--~~~~v~D~SS~ilsr~-iDvsk~dviyag 197 (365)
T COG1932 126 EEAGYGSIPDLSKWD--FSDNDAYVHFCWNETISGVEVPELPDIG---S--DGLLVADASSAILSRP-IDVSKYDVIYAG 197 (365)
T ss_pred eccCccCCCChhhcc--cCCCccEEEEecCCcccceEccCCCCCC---C--CceEEEecccHHhcCC-CChhHcceEEEe
Confidence 1223222 3334444666655556676654 12111 1 2889999886544332 112357899999
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHH----h----hh-hcCC--CCCh-hhHHHHH------hcCCcHHHHHHHHHH
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYF----L----QN-AEGS--GLAP-FDCWICL------RGVKTMALRVEKQQD 259 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~----~----~~-~~~~--~~~~-~~~~~~~------~~~~~~~~~~~~~~~ 259 (386)
-.|.+ ||.| .++++.+++.+.+.... + .. ..++ +.++ +..+... .....+....++..+
T Consensus 198 aQKnl-GpaG--ltvvIvr~~~l~r~~~~~~P~if~y~~~~~~~s~yNTPptfa~y~~~lv~~Wlk~~GGl~~~~~rn~~ 274 (365)
T COG1932 198 AQKNL-GPAG--LTVVIVRPDLLERAESYTLPSIFDYLTHADNGSMYNTPPTFAWYLLGLVFKWLKSQGGLEALEARNQA 274 (365)
T ss_pred hhhcc-Cccc--eEEEEEcHHHHhcccccCCchHhhchhhhccCCccCCcHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 99999 7788 68888886654332111 0 00 1111 2222 2222221 123344555667778
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
+++.|.+++++..-......+.. ++ ---++|.+.+.+..+.++.++...|+..--|+. +
T Consensus 275 ka~~LY~~id~s~fy~~~v~~~~-------------RS-~mnV~f~~~~~~ld~~fv~eae~~gl~~lkGhr-~------ 333 (365)
T COG1932 275 KAQLLYDWIDKSDFYRNLVAKAN-------------RS-RMNVTFTLVDAELDKGFVAEAEAAGLIYLKGHR-S------ 333 (365)
T ss_pred HHHHHHHHHHhCCccccccchhh-------------cc-ceeEEEEcCcHHHHHHHHHHHHHcCCceecccc-C------
Confidence 88889999988752111111111 11 123677777888889999999988887555521 1
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.+.+|+|+. .++++.+++.++.+.++
T Consensus 334 ------------------vgGmRasiynA~~~e~veaL~~fm~~f~~~ 363 (365)
T COG1932 334 ------------------VGGLRASIYNAVPLEDVEALTDFMDWFEET 363 (365)
T ss_pred ------------------CCceeeeeecCCCHHHHHHHHHHHHHHHHh
Confidence 233999984 58888888888877654
No 392
>KOG2040 consensus Glycine dehydrogenase (decarboxylating) [Amino acid transport and metabolism]
Probab=98.07 E-value=7.3e-05 Score=71.15 Aligned_cols=182 Identities=20% Similarity=0.292 Sum_probs=115.7
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHH------HHHHHHhhcCCC--ceEEeCcHH
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDA------LESLLAKLDKAD--RALCFTSGM 80 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~------l~~~l~~~~g~~--~~i~~~~gt 80 (386)
+..+.++= +-+|++..-|++.+...+..+ .=..+|.++ ..-.... ....+++++|.+ +.-+..-||
T Consensus 116 Nk~~ksfI-GmGYyn~~vP~~I~RNilenp----~W~TqYTPYQ~EIsQGRLEsllNyQTmi~dlTGL~~aNASLLDEgT 190 (1001)
T KOG2040|consen 116 NKIWKSFI-GMGYYNTHVPAVILRNILENP----GWYTQYTPYQAEISQGRLESLLNYQTMITDLTGLPMANASLLDEGT 190 (1001)
T ss_pred hhHHHHhh-ccccccccCcHHHHHHhhhCC----cceeccCCCchhhhhhhHHHHhhhHHhhhhccCCcccchhhhccch
Confidence 34444444 566777666665543222221 122345555 2211122 234566778877 677788888
Q ss_pred HHHHH-HHH-hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 81 AALAA-VTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 81 ~al~~-~~~-~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
+|-.+ .++ -.+++.+.++....|+-+..+++--++.+|++++.. |+.+.... ..+...+++..|.. -|.+.|.
T Consensus 191 AaaEAm~l~~~~~krkk~vvd~~~hpqtlsV~~TRa~~~~i~v~~~---~~~~~~~s-~~~v~gvlvQYP~t-~G~i~d~ 265 (1001)
T KOG2040|consen 191 AAAEAMALCNRINKRKKFVVDSNCHPQTLSVVKTRAKGFGIKVVVS---DIKEADYS-SKDVSGVLVQYPDT-EGSVLDF 265 (1001)
T ss_pred hHHHHHHHHHhhcccceEEecCCCCcchhhhhhccccccceeEEec---CHHHhhcc-ccceeEEEEEcCCC-CCcccCH
Confidence 55432 233 355667799999999998877766667777775433 33333322 24578888888877 6999999
Q ss_pred HHHHHHHHHcCCEEEEeCC-CCCCCccCCCCCCccEEEeccccc
Q 016612 159 RKIAEMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATKF 201 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~a-~~~~~~~~~~~~~~di~~~S~sK~ 201 (386)
.++++.+++++.++++--- .+.-.+..|.++|+||+++|...+
T Consensus 266 ~el~~~a~~~~s~vv~atDLLaLtiLrpPgefGaDIavGSsQRF 309 (1001)
T KOG2040|consen 266 DELVELAHANGSLVVMATDLLALTILRPPGEFGADIAVGSSQRF 309 (1001)
T ss_pred HHHHHHhhccCceEEEeehhhHHHccCChhhcCceeeecccccc
Confidence 9999999999887665322 233345567789999999997764
No 393
>PLN02994 1-aminocyclopropane-1-carboxylate synthase
Probab=97.87 E-value=3.4e-05 Score=61.95 Aligned_cols=58 Identities=17% Similarity=0.315 Sum_probs=45.2
Q ss_pred cccCC-CCc-hHHHHHHHHHhhcC--C--C-ceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCc
Q 016612 48 DYTRS-GNP-TRDALESLLAKLDK--A--D-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGG 105 (386)
Q Consensus 48 ~y~~~-g~~-~~~~l~~~l~~~~g--~--~-~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~ 105 (386)
.|... |.+ +|+++.+++.+.+| . + +.|++++| ++++. ++..+++|||.|+++.|.|++
T Consensus 87 ~Y~~~~G~~~lR~AiA~~l~~~~g~~v~~~pd~Ivvt~Ga~~al~~l~~~l~dpGD~VlVp~P~Y~~ 153 (153)
T PLN02994 87 LFQDYHGLANFRKAIANFMAEARGGRVKFDADMIVLSAGATAANEIIMFCIADPGDAFLVPTPYYAA 153 (153)
T ss_pred cCCCCCCcHHHHHHHHHHHHHHhCCCCccchhheEEcCCHHHHHHHHHHHHcCCCCEEEEeCCCCCC
Confidence 37776 876 89999999999877 2 2 45555555 58887 556689999999999999964
No 394
>KOG3843 consensus Predicted serine hydroxymethyltransferase SLA/LP (autoimmune hepatitis marker in humans) [Translation, ribosomal structure and biogenesis]
Probab=96.02 E-value=0.054 Score=46.56 Aligned_cols=166 Identities=14% Similarity=0.113 Sum_probs=89.5
Q ss_pred CCchHHHHHHHHH----hhcCCC---ceEEeCcHH-HHHH-HHHHh--cCCCC-EEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 53 GNPTRDALESLLA----KLDKAD---RALCFTSGM-AALA-AVTHL--LGTGE-EIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 53 g~~~~~~l~~~l~----~~~g~~---~~i~~~~gt-~al~-~~~~~--~~~g~-~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
|..+...+...++ .+.|.. ++++++-.| .++. +++.+ -+|.. -|+-++-.--+.+ ..+. ..|.+
T Consensus 51 gssll~~isne~a~~~i~l~glhav~nc~vvpl~tgmslslc~~s~r~krpkakyiiw~ridqks~~---ksi~-~agfe 126 (432)
T KOG3843|consen 51 GSSLLACISNEFAKDAIHLAGLHAVANCFVVPLATGMSLSLCFLSLRHKRPKAKYIIWLRIDQKSCF---KSII-HAGFE 126 (432)
T ss_pred chHHHHHHHHHHHHHHHHHhhhhhhhceeEEeccccccHHHHHHHHhhcCCcccEEEEEecchHHHH---HHHH-hcCCC
Confidence 4444444443333 344543 677666554 3443 34433 33433 3444444433332 2322 56777
Q ss_pred EEEeCCC--------CHHHHHhhhCC-CceEEE-E-eCCCCCCcccc-cHHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 121 VKRVNTC--------DLDEVASAIGP-WTKLVW-V-ESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 121 ~~~v~~~--------d~~~l~~~~~~-~~~~v~-~-~~~~nptG~~~-~l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+.++.. |++.+++.+.+ ....|+ + +..+-..-... .+++|+.+|..|+++-++..+|+.-...
T Consensus 127 piiie~i~d~d~l~tdleav~~~iee~g~dcilci~sttscfapr~pd~leaiaaica~~diphivnnayglqsee~i~~ 206 (432)
T KOG3843|consen 127 PIIIENILDGDELITDLEAVEAIIEELGEDCILCIHSTTSCFAPRSPDNLEAIAAICAAHDIPHIVNNAYGLQSEECIHK 206 (432)
T ss_pred ceeeeccccchHHHHhHHHHHHHHHHhCCceEEEEeecccccCCCCCchHHHHHHHHHccCchhhhccccccchHHHHHH
Confidence 6666532 67777776652 223222 2 22111111222 4999999999999999999998743211
Q ss_pred --CCCCC-CccEEEeccccccccCCCceEEEEEEcChhHHHHH
Q 016612 185 --RPLEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (386)
Q Consensus 185 --~~~~~-~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~ 224 (386)
..... ..|.++.|+-|.|..|-| ++++.+-++...+.+
T Consensus 207 iaa~~~~grida~vqsldknf~vpvg--gaiia~fk~n~iq~i 247 (432)
T KOG3843|consen 207 IAAAAECGRIDAFVQSLDKNFMVPVG--GAIIAAFKDNFIQEI 247 (432)
T ss_pred HHHHhhhccHHHHHHHhhhcceeecc--hhHhhHhHHHHHHHH
Confidence 11122 348889999999987764 444444445555543
No 395
>KOG2790 consensus Phosphoserine aminotransferase [Coenzyme transport and metabolism; Amino acid transport and metabolism]
Probab=92.93 E-value=1.7 Score=38.14 Aligned_cols=150 Identities=25% Similarity=0.283 Sum_probs=79.7
Q ss_pred hHHHHHHHHHhhcCCCc---eE-EeCcHHHHHHHH-HHh--cCCC---CEEEecCCCCCcHHHHHhhhcccCCcE-EEEe
Q 016612 56 TRDALESLLAKLDKADR---AL-CFTSGMAALAAV-THL--LGTG---EEIVAGDDLYGGTDRLLSRVTPKTGVV-VKRV 124 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~---~i-~~~~gt~al~~~-~~~--~~~g---~~Vlv~~~~~~~~~~~~~~~~~~~g~~-~~~v 124 (386)
+.+..+..+.+++..++ .+ +.++||....++ +.+ ++.| |-|++- .|.. .++ .-++++|.. .+..
T Consensus 53 ii~~tes~lreLlniPdn~~vlf~QGGGt~qFaAv~lNL~glK~g~~AdYiVTG--sWS~--KA~-~EAkk~~~~~~V~~ 127 (370)
T KOG2790|consen 53 IINDTESLLRELLNIPDNYKVLFLQGGGTGQFAAVPLNLIGLKHGRCADYVVTG--SWSA--KAA-EEAKKYGTPNIVIP 127 (370)
T ss_pred HHHHHHHHHHHHHcCCCceeEEEEeCCCcccccccchhhhccccCCccceEEec--cccH--HHH-HHHHhhCCceEEec
Confidence 67788888889988762 33 345566544432 223 3555 334443 2321 122 334455544 3333
Q ss_pred CC--------CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCC-CCccEEE
Q 016612 125 NT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLE-LGADIVM 195 (386)
Q Consensus 125 ~~--------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~-~~~di~~ 195 (386)
+. .|.+.++. +++.+.++.+.-..-.|.-++--. .-.-+|.+++.|-+.-. +..+.+ ...++++
T Consensus 128 ~~k~y~ygkvPd~~~w~~--~~da~yvyyCaNETVHGVEf~~~P---~~~~~~~vlVaDmSSnf--lSrpvDvsk~gvi~ 200 (370)
T KOG2790|consen 128 KLKSYTYGKVPDPSTWEL--NPDASYVYYCANETVHGVEFDFIP---VNDPKGAVLVADMSSNF--LSRPVDVSKFGVIF 200 (370)
T ss_pred cccccccCcCCChhhccc--CCCccEEEEecCceeeceecCCCC---CCCCCCceEEEecccch--hcCCccchhcceEE
Confidence 32 25555553 345557776655555566543211 11235888899987432 222222 2456777
Q ss_pred eccccccccCCCceEEEEEEcChhH
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERL 220 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~ 220 (386)
....|.. |+.|+ -.++.+++.+
T Consensus 201 aGAQKN~-G~aG~--Tvvivr~dll 222 (370)
T KOG2790|consen 201 AGAQKNV-GPAGV--TVVIVRKDLL 222 (370)
T ss_pred ecccccc-Ccccc--EEEEEehhhh
Confidence 7889998 77774 4444555533
No 396
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=85.90 E-value=4.6 Score=34.82 Aligned_cols=91 Identities=18% Similarity=0.227 Sum_probs=52.7
Q ss_pred HHHHHHHHHHhcCCCCEEE-ecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 79 GMAALAAVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 79 gt~al~~~~~~~~~g~~Vl-v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
|..+-..+.++++++-.|. +.++. .... ...++..|++++..+..|.+.|.++++. ...|++..+........-
T Consensus 8 G~~G~~v~~~L~~~~~~V~~l~R~~---~~~~-~~~l~~~g~~vv~~d~~~~~~l~~al~g-~d~v~~~~~~~~~~~~~~ 82 (233)
T PF05368_consen 8 GNQGRSVVRALLSAGFSVRALVRDP---SSDR-AQQLQALGAEVVEADYDDPESLVAALKG-VDAVFSVTPPSHPSELEQ 82 (233)
T ss_dssp SHHHHHHHHHHHHTTGCEEEEESSS---HHHH-HHHHHHTTTEEEES-TT-HHHHHHHHTT-CSEEEEESSCSCCCHHHH
T ss_pred cHHHHHHHHHHHhCCCCcEEEEecc---chhh-hhhhhcccceEeecccCCHHHHHHHHcC-CceEEeecCcchhhhhhh
Confidence 4455455555555665554 33333 1111 1334567999999999999999999984 445555444332223334
Q ss_pred HHHHHHHHHHcCCEEEE
Q 016612 158 IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 158 l~~i~~la~~~~~~li~ 174 (386)
.+.+.+.|++.|+-.++
T Consensus 83 ~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 83 QKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp HHHHHHHHHHHT-SEEE
T ss_pred hhhHHHhhhccccceEE
Confidence 57789999988764444
No 397
>PLN02672 methionine S-methyltransferase
Probab=85.18 E-value=21 Score=38.35 Aligned_cols=181 Identities=18% Similarity=0.141 Sum_probs=95.8
Q ss_pred CCCCccccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCcHHHHHHHHHHhcCCCCEEE---ecCCCCCcHHHHHh--
Q 016612 43 ENGPYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSGMAALAAVTHLLGTGEEIV---AGDDLYGGTDRLLS-- 111 (386)
Q Consensus 43 ~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~gt~al~~~~~~~~~g~~Vl---v~~~~~~~~~~~~~-- 111 (386)
....+.|.+. |.. .|..+...+..+++.+ +++++++-..|+..++.+..|.=.++ .+..-..-+...+.
T Consensus 416 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (1082)
T PLN02672 416 GLSYFPCEPPAGSKRFRNLIAGFMRIYHHIPLTPDNVVVFPSRAVAIENALRLFSPRLAIVDEHLTRWLPKKWLTSLAIE 495 (1082)
T ss_pred cCCCCCCCCCccchHHHHHHHHHHHHhcCCcCCccceEEeccHHHHHHHHHHhhChHHHhhhhhhhccCCHHHHhHhhhh
Confidence 4556677766 765 7888888888887653 67777777788865544443310000 11111111111110
Q ss_pred --hhcccCCcEEEEeCCC-CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC--------
Q 016612 112 --RVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-------- 179 (386)
Q Consensus 112 --~~~~~~g~~~~~v~~~-d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~-------- 179 (386)
......+..+..+... ..+.+.++++ -++++|+..-.....-....++.|.+.+++.|+.++.|.+-.
T Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 575 (1082)
T PLN02672 496 NATSDSKSDDVITVIEAPRQSDLVIELIKKLKPQVVVTGMADFEMRTSTAFEHLLNVTAEIGARLFLDISDHLELSSLPG 575 (1082)
T ss_pred cccccCccCCeEEEEeCCCcchHHHHHHHhCCCeEEEEeccchhhhhHHHHHHHHHHHHhhCcEEEEehhhheeeccCCC
Confidence 0112222333333321 2223444444 356677654333222122358899999999999999999832
Q ss_pred -CCCcc----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHH
Q 016612 180 -SPVLS----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY 225 (386)
Q Consensus 180 -~~~~~----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~ 225 (386)
.|++. .+....+.|++ .+-|.- ..+.+.+.+++.-++.+.+.+.
T Consensus 576 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 624 (1082)
T PLN02672 576 SNGVLKYLAGHPLPSHAAIIC-GLVKNQ-VYSDLEVAFVISENEAVLKALS 624 (1082)
T ss_pred cccHHHHhcCCCCCcchhHhh-hhhhcc-ccccceEEEEecCcHHHHHHHH
Confidence 11111 22223344444 577764 4557788888876665555443
No 398
>COG1648 CysG Siroheme synthase (precorrin-2 oxidase/ferrochelatase domain) [Coenzyme metabolism]
Probab=80.01 E-value=15 Score=31.29 Aligned_cols=92 Identities=15% Similarity=0.197 Sum_probs=55.5
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
..+++++|..|..-+..+++.|.+|.+-.|...+-. ....+..++.... ..-+.+++. + ..+++...+++
T Consensus 14 ~VlvvGgG~va~rKa~~ll~~ga~v~Vvs~~~~~el---~~~~~~~~i~~~~-~~~~~~~~~-----~-~~lviaAt~d~ 83 (210)
T COG1648 14 KVLVVGGGSVALRKARLLLKAGADVTVVSPEFEPEL---KALIEEGKIKWIE-REFDAEDLD-----D-AFLVIAATDDE 83 (210)
T ss_pred EEEEECCCHHHHHHHHHHHhcCCEEEEEcCCccHHH---HHHHHhcCcchhh-cccChhhhc-----C-ceEEEEeCCCH
Confidence 588899999999888888999999988888773333 2333343322222 112333333 2 33333333332
Q ss_pred CcccccHHHHHHHHHHcCCEEE-EeCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLL-VDNS 177 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li-~D~a 177 (386)
. -=++|.+.|+++++++- +|+.
T Consensus 84 ~----ln~~i~~~a~~~~i~vNv~D~p 106 (210)
T COG1648 84 E----LNERIAKAARERRILVNVVDDP 106 (210)
T ss_pred H----HHHHHHHHHHHhCCceeccCCc
Confidence 1 12789999999987654 4444
No 399
>PF02310 B12-binding: B12 binding domain; InterPro: IPR006158 The cobalamin (vitamin B12) binding domain can bind two different forms of the cobalamin cofactor, with cobalt bonded either to a methyl group (methylcobalamin) or to 5'-deoxyadenosine (adenosylcobalamin). Cobalamin-binding domains are mainly found in two families of enzymes present in animals and prokaryotes, which perform distinct kinds of reactions at the cobalt-carbon bond. Enzymes that require methylcobalamin carry out methyl transfer reactions. Enzymes that require adenosylcobalamin catalyse reactions in which the first step is the cleavage of adenosylcobalamin to form cob(II)alamin and the 5'-deoxyadenosyl radical, and thus act as radical generators. In both types of enzymes the B12-binding domain uses a histidine to bind the cobalt atom of cobalamin cofactors. This histidine is embedded in a DXHXXG sequence, the most conserved primary sequence motif of the domain [, , ]. Proteins containing the cobalamin-binding domain include: Animal and prokaryotic methionine synthase (2.1.1.13 from EC), which catalyse the transfer of a methyl group from methyl-cobalamin to homocysteine, yielding enzyme-bound cob(I)alamin and methionine. Animal and prokaryotic methylmalonyl-CoA mutase (5.4.99.2 from EC), which are involved in the degradation of several amino acids, odd-chain fatty acids and cholesterol via propionyl-CoA to the tricarboxylic acid cycle. Prokaryotic lysine 5,6-aminomutase (5.4.3.4 from EC). Prokaryotic glutamate mutase (5.4.99.1 from EC) []. Prokaryotic methyleneglutarate mutase (5.4.99.4 from EC). Prokaryotic isobutyryl-CoA mutase (5.4.99.13 from EC). The core structure of the cobalamin-binding domain is characterised by a five-stranded alpha/beta (Rossmann) fold, which consists of 5 parallel beta-sheets surrounded by 4-5 alpha helices in three layers (alpha/beta/alpha) []. Upon binding cobalamin, important elements of the binding site appear to become structured, including an alpha-helix that forms on one side of the cleft accommodating the nucleotide 'tail' of the cofactor. In cobalamin, the cobalt atom can be either free (dmb-off) or bound to dimethylbenzimidazole (dmb-on) according to the pH. When bound to the cobalamin-binding domain, the dimethylbenzimidazole ligand is replaced by the active histidine (His-on) of the DXHXXG motif. The replacement of dimethylbenzimidazole by histidine allows switching between the catalytic and activation cycles []. In methionine synthase the cobalamin cofactor is sandwiched between the cobalamin-binding domain and an approximately 90 residues N-terminal domain forming a helical bundle comprising two pairs of antiparallel helices []. In methionine synthase, there is a second, adjacent domain involved in cobalamin binding that forms a 4-helical bundle cap (IPR003759 from INTERPRO); in the conversion to the active conformation of this enzyme, the 4-helical cap rotates to allow the cobalamin cofactor to bind the activation domain (IPR004223 from INTERPRO) [].; GO: 0031419 cobalamin binding, 0046872 metal ion binding; PDB: 1Y80_A 3BUL_A 1K7Y_A 1BMT_A 3IV9_A 1K98_A 3IVA_A 3KP1_A 3KOW_A 3KOZ_A ....
Probab=78.40 E-value=4.3 Score=30.83 Aligned_cols=88 Identities=15% Similarity=0.176 Sum_probs=57.4
Q ss_pred HHHHhhhcccCCcEEEEeCCC-CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCC
Q 016612 107 DRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPV 182 (386)
Q Consensus 107 ~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~ 182 (386)
...+..+++..|.++..++.. +.+++.+.+. .++++|.++.... .......++++..++. ++.+++-+.+....
T Consensus 17 l~~la~~l~~~G~~v~~~d~~~~~~~l~~~~~~~~pd~V~iS~~~~--~~~~~~~~l~~~~k~~~p~~~iv~GG~~~t~~ 94 (121)
T PF02310_consen 17 LLYLAAYLRKAGHEVDILDANVPPEELVEALRAERPDVVGISVSMT--PNLPEAKRLARAIKERNPNIPIVVGGPHATAD 94 (121)
T ss_dssp HHHHHHHHHHTTBEEEEEESSB-HHHHHHHHHHTTCSEEEEEESSS--THHHHHHHHHHHHHTTCTTSEEEEEESSSGHH
T ss_pred HHHHHHHHHHCCCeEEEECCCCCHHHHHHHHhcCCCcEEEEEccCc--CcHHHHHHHHHHHHhcCCCCEEEEECCchhcC
Confidence 333567788889999988765 5677776654 6788888876432 3445567788887776 78999877765432
Q ss_pred ccCCCC--CCccEEEe
Q 016612 183 LSRPLE--LGADIVMH 196 (386)
Q Consensus 183 ~~~~~~--~~~di~~~ 196 (386)
....+. .+.|.++.
T Consensus 95 ~~~~l~~~~~~D~vv~ 110 (121)
T PF02310_consen 95 PEEILREYPGIDYVVR 110 (121)
T ss_dssp HHHHHHHHHTSEEEEE
T ss_pred hHHHhccCcCcceecC
Confidence 222222 46676554
No 400
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=73.60 E-value=8.2 Score=34.86 Aligned_cols=102 Identities=24% Similarity=0.205 Sum_probs=61.7
Q ss_pred eEEeCcHH--HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc----cCCcEEEEeCCCCHHHHHhhhCC-CceEEEE
Q 016612 73 ALCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP----KTGVVVKRVNTCDLDEVASAIGP-WTKLVWV 145 (386)
Q Consensus 73 ~i~~~~gt--~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~----~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~ 145 (386)
.+++++|+ -+-+.++++++.|+.|++-+.-..++.....++.+ ..++.+...|..|.+.|++..+. +...|+-
T Consensus 4 ~VLVtGgaGyiGsht~l~L~~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~f~~~Dl~D~~~L~kvF~~~~fd~V~H 83 (343)
T KOG1371|consen 4 HVLVTGGAGYIGSHTVLALLKRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVFFVEGDLNDAEALEKLFSEVKFDAVMH 83 (343)
T ss_pred EEEEecCCcceehHHHHHHHhCCCcEEEEecccccchhHHHHHHHhcCCCCceEEEEeccCCHHHHHHHHhhcCCceEEe
Confidence 45666665 44578899999999999877655444433333322 34577888888899999998872 3333331
Q ss_pred --------eCCCCCCccccc----HHHHHHHHHHcCCEEEE
Q 016612 146 --------ESPTNPRQQICD----IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 146 --------~~~~nptG~~~~----l~~i~~la~~~~~~li~ 174 (386)
++..+|+-.... ---+.+.+++++..=++
T Consensus 84 fa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~~~~~~V 124 (343)
T KOG1371|consen 84 FAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAHNVKALV 124 (343)
T ss_pred ehhhhccchhhhCchhheehhhhhHHHHHHHHHHcCCceEE
Confidence 233444322221 23466777888754443
No 401
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=71.01 E-value=19 Score=31.70 Aligned_cols=91 Identities=14% Similarity=0.171 Sum_probs=50.5
Q ss_pred EEeCcHH-HHHHHHHHhcCCCCEEEecC-CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCC
Q 016612 74 LCFTSGM-AALAAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTN 150 (386)
Q Consensus 74 i~~~~gt-~al~~~~~~~~~g~~Vlv~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~n 150 (386)
|++.+|| ++-.++..+.+.|..|+++- ..|.. ......|...+.....|.+++.+.+. .++++|+ ...+
T Consensus 3 ILvlGGT~egr~la~~L~~~g~~v~~s~~t~~~~------~~~~~~g~~~v~~g~l~~~~l~~~l~~~~i~~VI--DAtH 74 (256)
T TIGR00715 3 VLLMGGTVDSRAIAKGLIAQGIEILVTVTTSEGK------HLYPIHQALTVHTGALDPQELREFLKRHSIDILV--DATH 74 (256)
T ss_pred EEEEechHHHHHHHHHHHhCCCeEEEEEccCCcc------ccccccCCceEEECCCCHHHHHHHHHhcCCCEEE--EcCC
Confidence 5666776 76666667777787776433 33422 22233444444455557777877776 4566554 2222
Q ss_pred CCcccccHHHHHHHHHHcCCEEE
Q 016612 151 PRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li 173 (386)
|..... -+-+.+.|++.|+..+
T Consensus 75 PfA~~i-s~~a~~a~~~~~ipyl 96 (256)
T TIGR00715 75 PFAAQI-TTNATAVCKELGIPYV 96 (256)
T ss_pred HHHHHH-HHHHHHHHHHhCCcEE
Confidence 322111 1456677888776555
No 402
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=70.95 E-value=48 Score=28.05 Aligned_cols=92 Identities=22% Similarity=0.278 Sum_probs=55.5
Q ss_pred CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhhCCCceEEEEeCCC
Q 016612 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 71 ~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
..++++++|..|...+..+++.|-.|.|-+|...... ....+... +.++.-. +.+++. ...+| +..++
T Consensus 10 k~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l---~~l~~~~~--i~~~~~~~~~~dl~-----~~~lV-i~at~ 78 (205)
T TIGR01470 10 RAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESEL---TLLAEQGG--ITWLARCFDADILE-----GAFLV-IAATD 78 (205)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHH---HHHHHcCC--EEEEeCCCCHHHhC-----CcEEE-EECCC
Confidence 3688999999999888888888888877777654332 23333333 3333321 233332 23344 34444
Q ss_pred CCCcccccHHHHHHHHHHcCCEEE-EeCC
Q 016612 150 NPRQQICDIRKIAEMAHAHGALLL-VDNS 177 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~~~li-~D~a 177 (386)
++ ..-+.|.+.|++.++++- +|+.
T Consensus 79 d~----~ln~~i~~~a~~~~ilvn~~d~~ 103 (205)
T TIGR01470 79 DE----ELNRRVAHAARARGVPVNVVDDP 103 (205)
T ss_pred CH----HHHHHHHHHHHHcCCEEEECCCc
Confidence 32 123689999999998774 5555
No 403
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=70.31 E-value=31 Score=28.11 Aligned_cols=83 Identities=23% Similarity=0.271 Sum_probs=52.9
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 79 GMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 79 gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
|.-+-.++..+++.|-+|....-.-.... . ..+++++..+..|++.+.+++. +...|+...+.++. .....
T Consensus 8 G~vG~~l~~~L~~~~~~V~~~~R~~~~~~----~---~~~~~~~~~d~~d~~~~~~al~-~~d~vi~~~~~~~~-~~~~~ 78 (183)
T PF13460_consen 8 GFVGRALAKQLLRRGHEVTALVRSPSKAE----D---SPGVEIIQGDLFDPDSVKAALK-GADAVIHAAGPPPK-DVDAA 78 (183)
T ss_dssp SHHHHHHHHHHHHTTSEEEEEESSGGGHH----H---CTTEEEEESCTTCHHHHHHHHT-TSSEEEECCHSTTT-HHHHH
T ss_pred ChHHHHHHHHHHHCCCEEEEEecCchhcc----c---ccccccceeeehhhhhhhhhhh-hcchhhhhhhhhcc-ccccc
Confidence 44555667777777777653322221221 2 7889999999999999999998 45566655433322 23346
Q ss_pred HHHHHHHHHcCC
Q 016612 159 RKIAEMAHAHGA 170 (386)
Q Consensus 159 ~~i~~la~~~~~ 170 (386)
+.+.+.|++.++
T Consensus 79 ~~~~~a~~~~~~ 90 (183)
T PF13460_consen 79 KNIIEAAKKAGV 90 (183)
T ss_dssp HHHHHHHHHTTS
T ss_pred cccccccccccc
Confidence 778888887654
No 404
>COG2102 Predicted ATPases of PP-loop superfamily [General function prediction only]
Probab=69.26 E-value=57 Score=27.88 Aligned_cols=95 Identities=14% Similarity=0.192 Sum_probs=62.8
Q ss_pred eEEeCcHHHHHHHHHHhcCCCCEEE-----ecCCC-----CCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhC
Q 016612 73 ALCFTSGMAALAAVTHLLGTGEEIV-----AGDDL-----YGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG 137 (386)
Q Consensus 73 ~i~~~~gt~al~~~~~~~~~g~~Vl-----v~~~~-----~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~ 137 (386)
+.++++|-.+.+++...++.|..|. .+... |..........++..|+++...... ..++|.+.+.
T Consensus 4 ~aL~SGGKDS~~Al~~a~~~G~eV~~Ll~~~p~~~dS~m~H~~n~~~~~~~Ae~~gi~l~~~~~~g~~e~eve~L~~~l~ 83 (223)
T COG2102 4 IALYSGGKDSFYALYLALEEGHEVVYLLTVKPENGDSYMFHTPNLELAELQAEAMGIPLVTFDTSGEEEREVEELKEALR 83 (223)
T ss_pred EEEEecCcHHHHHHHHHHHcCCeeEEEEEEecCCCCeeeeeccchHHHHHHHHhcCCceEEEecCccchhhHHHHHHHHH
Confidence 4567888888877777777776653 22221 2223344467788899998888764 4666766665
Q ss_pred C-CceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEE
Q 016612 138 P-WTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 138 ~-~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~ 174 (386)
. +...|+ +|.+. -...+..+|++.|+.++.
T Consensus 84 ~l~~d~iv-------~GaI~s~yqk~rve~lc~~lGl~~~~ 117 (223)
T COG2102 84 RLKVDGIV-------AGAIASEYQKERVERLCEELGLKVYA 117 (223)
T ss_pred hCcccEEE-------EchhhhHHHHHHHHHHHHHhCCEEee
Confidence 2 344665 57775 378899999999886553
No 405
>COG1606 ATP-utilizing enzymes of the PP-loop superfamily [General function prediction only]
Probab=68.78 E-value=30 Score=30.14 Aligned_cols=97 Identities=15% Similarity=0.177 Sum_probs=56.2
Q ss_pred ceEEeCcHH-HHHHHHHHhcCCCCEEE---ecCCCCCc-HHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 72 RALCFTSGM-AALAAVTHLLGTGEEIV---AGDDLYGG-TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt-~al~~~~~~~~~g~~Vl---v~~~~~~~-~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
-.|.+++|. +.+-+.++.-.-|++|+ +..|..+. ........++..|++...++++-.+ ... ..
T Consensus 20 v~vAfSGGvDSslLa~la~~~lG~~v~AvTv~sP~~p~~e~e~A~~~A~~iGi~H~~i~~~~~~--~~~---------~~ 88 (269)
T COG1606 20 VVVAFSGGVDSSLLAKLAKEALGDNVVAVTVDSPYIPRREIEEAKNIAKEIGIRHEFIKMNRMD--PEF---------KE 88 (269)
T ss_pred EEEEecCCccHHHHHHHHHHHhccceEEEEEecCCCChhhhhHHHHHHHHhCCcceeeehhhcc--hhh---------cc
Confidence 467788898 55544444333356554 33343332 2222346677888888888764322 111 11
Q ss_pred CCCCCCcccc--cHHHHHHHHHHcCCEEEEeCCCC
Q 016612 147 SPTNPRQQIC--DIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 147 ~~~nptG~~~--~l~~i~~la~~~~~~li~D~a~~ 179 (386)
++.|+.=.+- =...|.+.++++|.-+++|++-+
T Consensus 89 n~~~rCY~CK~~v~~~l~~~a~~~Gyd~V~dGtNa 123 (269)
T COG1606 89 NPENRCYLCKRAVYSTLVEEAEKRGYDVVADGTNA 123 (269)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHcCCCEEEeCCcH
Confidence 2333322221 25789999999999999999965
No 406
>PRK05096 guanosine 5'-monophosphate oxidoreductase; Provisional
Probab=67.81 E-value=99 Score=28.42 Aligned_cols=123 Identities=16% Similarity=0.175 Sum_probs=73.0
Q ss_pred eEEeCcHH-HH-HHHHHHhcC--CCCEEEecCCCCCcHHHHH---hhhcccC-CcEEEEeCCCCHHHHHhhhCCCceEEE
Q 016612 73 ALCFTSGM-AA-LAAVTHLLG--TGEEIVAGDDLYGGTDRLL---SRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVW 144 (386)
Q Consensus 73 ~i~~~~gt-~a-l~~~~~~~~--~g~~Vlv~~~~~~~~~~~~---~~~~~~~-g~~~~~v~~~d~~~l~~~~~~~~~~v~ 144 (386)
.+.++.|+ +. ...+..++. +|-.+++-+..|+-....+ +.+.+.+ ..+++-=...+.+..++++.....+|-
T Consensus 98 ~~~vavG~~~~d~er~~~L~~~~~g~D~iviD~AhGhs~~~i~~ik~ik~~~P~~~vIaGNV~T~e~a~~Li~aGAD~vK 177 (346)
T PRK05096 98 HVMVSTGTSDADFEKTKQILALSPALNFICIDVANGYSEHFVQFVAKAREAWPDKTICAGNVVTGEMVEELILSGADIVK 177 (346)
T ss_pred eEEEEecCCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHHhCCCCcEEEecccCHHHHHHHHHcCCCEEE
Confidence 44456665 33 455555554 5666777777776554433 2222232 344444444578888888875555553
Q ss_pred -------EeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCccCCCCCCccEEE
Q 016612 145 -------VESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRPLELGADIVM 195 (386)
Q Consensus 145 -------~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~~~~~~~~di~~ 195 (386)
+|...-.+|.-.| +.+.++.|+++|+.+|.|+-.. .|.+...+..|+|.+.
T Consensus 178 VGIGpGSiCtTr~vtGvG~PQltAV~~~a~~a~~~gvpiIADGGi~~sGDI~KAlaaGAd~VM 240 (346)
T PRK05096 178 VGIGPGSVCTTRVKTGVGYPQLSAVIECADAAHGLGGQIVSDGGCTVPGDVAKAFGGGADFVM 240 (346)
T ss_pred EcccCCccccCccccccChhHHHHHHHHHHHHHHcCCCEEecCCcccccHHHHHHHcCCCEEE
Confidence 2333344555555 5667777788999999999754 3445455566887654
No 407
>PLN00191 enolase
Probab=66.79 E-value=48 Score=31.99 Aligned_cols=94 Identities=12% Similarity=0.087 Sum_probs=64.6
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC--CCHHHHHhhhCCC-ceEEEEeCCCCCCccccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICD 157 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~ 157 (386)
+++..+..++.+=+.+.+.+|....-...|..+.+...+.+..-+. .+++++++.+..+ ..++.+.. |..|.+.+
T Consensus 299 e~i~~~~~L~~~y~I~~IEDPl~~~D~eg~~~Lt~~~~ipIvgDE~~vtn~~~l~~~I~~~aad~i~iKl--~qiGGITe 376 (457)
T PLN00191 299 ELIDLYKEFVSDYPIVSIEDPFDQDDWEHWAKLTSLEDVQIVGDDLLVTNPKRVAKAIQEKACNALLLKV--NQIGTVTE 376 (457)
T ss_pred HHHHHHHHHhhcCCcEEEECCCCcccHHHHHHHHccCCCcEEccCcccCCHHHHHHHHHhCCCCEEEecc--cccCCHHH
Confidence 5555556666654567899998765555566666666566555453 4688888888744 34444433 33689999
Q ss_pred HHHHHHHHHHcCCEEEEeC
Q 016612 158 IRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~ 176 (386)
..+++++|+++|+.+++-.
T Consensus 377 a~~~a~lA~~~G~~~~ish 395 (457)
T PLN00191 377 SIEAVKMSKAAGWGVMTSH 395 (457)
T ss_pred HHHHHHHHHHCCCEEEeCC
Confidence 9999999999999888743
No 408
>PLN02589 caffeoyl-CoA O-methyltransferase
Probab=66.73 E-value=84 Score=27.54 Aligned_cols=123 Identities=18% Similarity=0.161 Sum_probs=62.9
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcH--HHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHH
Q 016612 56 TRDALESLLAKLDKADRALCFTSG--MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDE 131 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~g--t~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~ 131 (386)
...++-..+.+..++..++=++++ .+++....+ +.++.+|+.-+..- .+....+..++..|. ++..+.-+-.+-
T Consensus 66 ~~g~lL~~l~~~~~ak~iLEiGT~~GySal~la~a-l~~~g~v~tiE~~~-~~~~~Ar~~~~~ag~~~~I~~~~G~a~e~ 143 (247)
T PLN02589 66 DEGQFLNMLLKLINAKNTMEIGVYTGYSLLATALA-LPEDGKILAMDINR-ENYELGLPVIQKAGVAHKIDFREGPALPV 143 (247)
T ss_pred HHHHHHHHHHHHhCCCEEEEEeChhhHHHHHHHhh-CCCCCEEEEEeCCH-HHHHHHHHHHHHCCCCCceEEEeccHHHH
Confidence 344455555666676665555443 355554433 45555677655432 223333455555653 233333222333
Q ss_pred HHhhh-----CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 132 VASAI-----GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 132 l~~~~-----~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
|.+.. .....+|+++.- .......++.+.++.+ .|.+|++|++...|..
T Consensus 144 L~~l~~~~~~~~~fD~iFiDad--K~~Y~~y~~~~l~ll~-~GGviv~DNvl~~G~v 197 (247)
T PLN02589 144 LDQMIEDGKYHGTFDFIFVDAD--KDNYINYHKRLIDLVK-VGGVIGYDNTLWNGSV 197 (247)
T ss_pred HHHHHhccccCCcccEEEecCC--HHHhHHHHHHHHHhcC-CCeEEEEcCCCCCCcc
Confidence 33332 236778888754 1112223455555444 3777999999766554
No 409
>TIGR03573 WbuX N-acetyl sugar amidotransferase. This enzyme has been implicated in the formation of the acetamido moiety (sugar-NC(=NH)CH3) which is found on some exopolysaccharides and is positively charged at neutral pH. The reaction involves ligation of ammonia with a sugar N-acetyl group, displacing water. In E. coli (O145 strain) and Pseudomonas aeruginosa (O12 strain) this gene is known as wbuX and ifnA respectively and likely acts on sialic acid. In Campylobacter jejuni, the gene is known as pseA and acts on pseudaminic acid in the process of flagellin glycosylation. In other Pseudomonas strains and various organisms it is unclear what the identity of the sugar substrate is, and in fact, the phylogenetic tree of this family sports a considerably deep branching suggestive of possible major differences in substrate structure. Nevertheless, the family is characterized by a conserved tetracysteine motif (CxxC.....[GN]xCxxC) possibly indicative of a metal binding site, as well as an
Probab=66.46 E-value=41 Score=31.13 Aligned_cols=114 Identities=17% Similarity=0.163 Sum_probs=60.7
Q ss_pred HHHHHHHHhhc---C--CCceEEeCcHHHHHH-H-HH-HhcCCCCEE--EecCCCCCcHHH--HHhhhcccCCcEEEEeC
Q 016612 58 DALESLLAKLD---K--ADRALCFTSGMAALA-A-VT-HLLGTGEEI--VAGDDLYGGTDR--LLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 58 ~~l~~~l~~~~---g--~~~~i~~~~gt~al~-~-~~-~~~~~g~~V--lv~~~~~~~~~~--~~~~~~~~~g~~~~~v~ 125 (386)
+++++.+.++. + .+-.|.+++|-.+.. + ++ ..+ |..+ +.-++.+.+-.. -+..+++..|++...+.
T Consensus 43 ~~l~~l~~~~k~~~~~~yD~iV~lSGGkDSs~la~ll~~~~--gl~~l~vt~~~~~~~e~~~~n~~~~~~~lgvd~~~i~ 120 (343)
T TIGR03573 43 KELEELVDKIKKKGGGRYDCIIGVSGGKDSTYQAHVLKKKL--GLNPLLVTVDPGWNTELGVKNLNNLIKKLGFDLHTIT 120 (343)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHHHh--CCceEEEEECCCCCCHHHHHHHHHHHHHcCCCeEEEe
Confidence 34555555443 2 233556677764432 2 22 222 3333 344555543222 34677888999887777
Q ss_pred CCCHHHHHhhhCCCceEEEEeCCCCCCccc--ccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 126 TCDLDEVASAIGPWTKLVWVESPTNPRQQI--CDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 126 ~~d~~~l~~~~~~~~~~v~~~~~~nptG~~--~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
. |.+.+.+......+ ...+|.... .....+.++|+++|+.+|+.+...
T Consensus 121 ~-d~~~~~~l~~~~~~-----~~~~pc~~c~~~~~~~l~~~A~~~gi~~Il~G~~~ 170 (343)
T TIGR03573 121 I-NPETFRKLQRAYFK-----KVGDPEWPQDHAIFASVYQVALKFNIPLIIWGENI 170 (343)
T ss_pred C-CHHHHHHHHHHHHh-----ccCCCchhhhhHHHHHHHHHHHHhCCCEEEeCCCH
Confidence 5 44444433321111 222333222 235788899999999999887643
No 410
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=66.43 E-value=46 Score=29.77 Aligned_cols=97 Identities=14% Similarity=0.179 Sum_probs=60.9
Q ss_pred eEEeCcHH---HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC-cEEEEeCCCCHHHHHhhhCCCceEEEEeCC
Q 016612 73 ALCFTSGM---AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 73 ~i~~~~gt---~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~ 148 (386)
++.+.=|+ -+...+..+-+.|..|++|--.-......+ +.....| +-+-.++..|.+.++++++...-+|=+..-
T Consensus 62 iVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~l-kvmGdLGQvl~~~fd~~DedSIr~vvk~sNVVINLIGr 140 (391)
T KOG2865|consen 62 IVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHL-KVMGDLGQVLFMKFDLRDEDSIRAVVKHSNVVINLIGR 140 (391)
T ss_pred eEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhhe-eecccccceeeeccCCCCHHHHHHHHHhCcEEEEeecc
Confidence 44444444 445677778889999998754333333222 3333333 233344556999999998855445545566
Q ss_pred CCCCcccc--c-----HHHHHHHHHHcCC
Q 016612 149 TNPRQQIC--D-----IRKIAEMAHAHGA 170 (386)
Q Consensus 149 ~nptG~~~--~-----l~~i~~la~~~~~ 170 (386)
..+|+... | -++|+.+|++-|+
T Consensus 141 d~eTknf~f~Dvn~~~aerlAricke~GV 169 (391)
T KOG2865|consen 141 DYETKNFSFEDVNVHIAERLARICKEAGV 169 (391)
T ss_pred ccccCCcccccccchHHHHHHHHHHhhCh
Confidence 67777763 2 5889999999876
No 411
>KOG2741 consensus Dimeric dihydrodiol dehydrogenase [Carbohydrate transport and metabolism; Secondary metabolites biosynthesis, transport and catabolism]
Probab=66.07 E-value=15 Score=33.42 Aligned_cols=71 Identities=20% Similarity=0.265 Sum_probs=52.1
Q ss_pred CCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC--CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 102 LYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
.|+++. ..++...++++++...++...+-+.. .+-|.|+++-|--. .+.+.++|.+.|+++| +++.|+.+.
T Consensus 60 ~y~syE----eLakd~~vDvVyi~~~~~qH~evv~l~l~~~K~VL~EKPla~--n~~e~~~iveaA~~rg-v~~meg~~~ 132 (351)
T KOG2741|consen 60 AYGSYE----ELAKDPEVDVVYISTPNPQHYEVVMLALNKGKHVLCEKPLAM--NVAEAEEIVEAAEARG-VFFMEGLWW 132 (351)
T ss_pred cccCHH----HHhcCCCcCEEEeCCCCccHHHHHHHHHHcCCcEEecccccC--CHHHHHHHHHHHHHcC-cEEEeeeee
Confidence 577774 77888889999999887766664433 45566887766432 3457999999999999 667777754
No 412
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=64.96 E-value=30 Score=30.72 Aligned_cols=88 Identities=14% Similarity=0.151 Sum_probs=51.9
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-----CC-ceEEEE
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-----PW-TKLVWV 145 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-----~~-~~~v~~ 145 (386)
|+++++| -+-.++..+++.|..|.+..-.-.. ....+++.+..+..|++.+.++++ .. ...+++
T Consensus 2 ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~--------~~~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~ 73 (285)
T TIGR03649 2 ILLTGGTGKTASRIARLLQAASVPFLVASRSSSS--------SAGPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYL 73 (285)
T ss_pred EEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcc--------ccCCCCccccccCCCHHHHHHHHhcccCcCCceeEEEE
Confidence 4455555 3345666677778766532211110 112456666777789999998873 23 566766
Q ss_pred eCCCCCCcccccHHHHHHHHHHcCC
Q 016612 146 ESPTNPRQQICDIRKIAEMAHAHGA 170 (386)
Q Consensus 146 ~~~~nptG~~~~l~~i~~la~~~~~ 170 (386)
..+..+ ........+.+.|++.|+
T Consensus 74 ~~~~~~-~~~~~~~~~i~aa~~~gv 97 (285)
T TIGR03649 74 VAPPIP-DLAPPMIKFIDFARSKGV 97 (285)
T ss_pred eCCCCC-ChhHHHHHHHHHHHHcCC
Confidence 655332 223356778888988886
No 413
>PRK08335 translation initiation factor IF-2B subunit alpha; Validated
Probab=63.15 E-value=83 Score=28.05 Aligned_cols=97 Identities=15% Similarity=0.159 Sum_probs=53.9
Q ss_pred ceEEeCcHH-HHHHHHHHhcCCCC--EEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 72 RALCFTSGM-AALAAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt-~al~~~~~~~~~g~--~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+.|++-+.+ .++..+....+.|. +|++.+ |.+.+..- ...+...|+++..+.......+.+ +...|++-
T Consensus 111 ~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l--a~eL~~~GI~vtlI~Dsa~~~~m~----~vd~VivG 184 (275)
T PRK08335 111 DVIITHSFSSAVLEILKTAKRKGKRFKVILTESAPDYEGLAL--ANELEFLGIEFEVITDAQLGLFAK----EATLALVG 184 (275)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCceEEEEecCCCchhHHHH--HHHHHHCCCCEEEEeccHHHHHHH----hCCEEEEC
Confidence 556665555 34455555554554 566544 55554432 234556789988887544444443 24455542
Q ss_pred -CCCCCCccccc---HHHHHHHHHHcCCEEEE
Q 016612 147 -SPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 147 -~~~nptG~~~~---l~~i~~la~~~~~~li~ 174 (386)
.--...|.+.+ --.++-+|+.|++++++
T Consensus 185 AD~I~~nG~v~NKiGT~~lA~~Ak~~~vPfyV 216 (275)
T PRK08335 185 ADNVTRDGYVVNKAGTYLLALACHDNGVPFYV 216 (275)
T ss_pred ccEEecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 11112244443 24577788999998887
No 414
>PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases. The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A ....
Probab=63.00 E-value=25 Score=29.75 Aligned_cols=123 Identities=15% Similarity=0.190 Sum_probs=69.4
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHH--HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCCCHH
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLD 130 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt--~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~ 130 (386)
+...++-..+.+..++..++-+++++ +++....+ +.++.+|++-+..- ......+..++..|. ++..+..+-.+
T Consensus 31 ~~~g~lL~~l~~~~~~k~vLEIGt~~GySal~la~~-l~~~g~i~tiE~~~-~~~~~A~~~~~~ag~~~~I~~~~gda~~ 108 (205)
T PF01596_consen 31 PETGQLLQMLVRLTRPKRVLEIGTFTGYSALWLAEA-LPEDGKITTIEIDP-ERAEIARENFRKAGLDDRIEVIEGDALE 108 (205)
T ss_dssp HHHHHHHHHHHHHHT-SEEEEESTTTSHHHHHHHHT-STTTSEEEEEESSH-HHHHHHHHHHHHTTGGGGEEEEES-HHH
T ss_pred HHHHHHHHHHHHhcCCceEEEeccccccHHHHHHHh-hcccceEEEecCcH-HHHHHHHHHHHhcCCCCcEEEEEeccHh
Confidence 34455666777778888877776655 66655543 44555777655432 233344556666664 34444433333
Q ss_pred HHHhhhC----CCceEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 131 EVASAIG----PWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 131 ~l~~~~~----~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
-+.+..+ ....+|+++..- +.+. -++.+.++.+ .|.+||+|++...|..
T Consensus 109 ~l~~l~~~~~~~~fD~VFiDa~K---~~y~~y~~~~~~ll~-~ggvii~DN~l~~G~V 162 (205)
T PF01596_consen 109 VLPELANDGEEGQFDFVFIDADK---RNYLEYFEKALPLLR-PGGVIIADNVLWRGSV 162 (205)
T ss_dssp HHHHHHHTTTTTSEEEEEEESTG---GGHHHHHHHHHHHEE-EEEEEEEETTTGGGGG
T ss_pred hHHHHHhccCCCceeEEEEcccc---cchhhHHHHHhhhcc-CCeEEEEcccccccee
Confidence 3444433 246899998742 2222 2455555443 4889999999766643
No 415
>PRK04296 thymidine kinase; Provisional
Probab=61.48 E-value=42 Score=27.94 Aligned_cols=92 Identities=10% Similarity=0.085 Sum_probs=48.0
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~ 157 (386)
.++..+..+...|..|++..|....... ...++...|+++..+.....+++.+.+. .++.+|+++-.+... ...
T Consensus 18 ~~l~~~~~~~~~g~~v~i~k~~~d~~~~-~~~i~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~dvviIDEaq~l~--~~~ 94 (190)
T PRK04296 18 ELLQRAYNYEERGMKVLVFKPAIDDRYG-EGKVVSRIGLSREAIPVSSDTDIFELIEEEGEKIDCVLIDEAQFLD--KEQ 94 (190)
T ss_pred HHHHHHHHHHHcCCeEEEEecccccccc-CCcEecCCCCcccceEeCChHHHHHHHHhhCCCCCEEEEEccccCC--HHH
Confidence 4455666666678888766553221110 1245566665443322234444444432 367788888764311 011
Q ss_pred HHHHHHHHHHcCCEEEEe
Q 016612 158 IRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D 175 (386)
+.++.+.++..|+.+|+=
T Consensus 95 v~~l~~~l~~~g~~vi~t 112 (190)
T PRK04296 95 VVQLAEVLDDLGIPVICY 112 (190)
T ss_pred HHHHHHHHHHcCCeEEEE
Confidence 455666666678777653
No 416
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=59.43 E-value=45 Score=30.05 Aligned_cols=95 Identities=22% Similarity=0.201 Sum_probs=61.3
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-CCceEEE-----
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVW----- 144 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-~~~~~v~----- 144 (386)
.|++++|+.=| +.+..+++.|..|+|-+.-..+........ . .++..-+..|-+.|.+.+. .++.+|+
T Consensus 2 ~iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v~~~---~-~~f~~gDi~D~~~L~~vf~~~~idaViHFAa~ 77 (329)
T COG1087 2 KVLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIALLKL---Q-FKFYEGDLLDRALLTAVFEENKIDAVVHFAAS 77 (329)
T ss_pred eEEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHhhhc---c-CceEEeccccHHHHHHHHHhcCCCEEEECccc
Confidence 36677776434 577788899999888777666665332211 1 5677777778888888876 4566554
Q ss_pred ---EeCCCCCCcccc----cHHHHHHHHHHcCCE
Q 016612 145 ---VESPTNPRQQIC----DIRKIAEMAHAHGAL 171 (386)
Q Consensus 145 ---~~~~~nptG~~~----~l~~i~~la~~~~~~ 171 (386)
=++..+|.-... .--.|.+.|+++|+.
T Consensus 78 ~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~gv~ 111 (329)
T COG1087 78 ISVGESVQNPLKYYDNNVVGTLNLIEAMLQTGVK 111 (329)
T ss_pred cccchhhhCHHHHHhhchHhHHHHHHHHHHhCCC
Confidence 245555543332 145688888888763
No 417
>PRK05562 precorrin-2 dehydrogenase; Provisional
Probab=58.64 E-value=1.2e+02 Score=26.11 Aligned_cols=92 Identities=13% Similarity=0.049 Sum_probs=55.6
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
.++++++|.-|..-+..+++-|..|.|-.|...+-.. ..++...++...-+. +.+++. ...+|+.. .+++
T Consensus 27 ~VLVVGGG~VA~RK~~~Ll~~gA~VtVVap~i~~el~---~l~~~~~i~~~~r~~-~~~dl~-----g~~LViaA-TdD~ 96 (223)
T PRK05562 27 KVLIIGGGKAAFIKGKTFLKKGCYVYILSKKFSKEFL---DLKKYGNLKLIKGNY-DKEFIK-----DKHLIVIA-TDDE 96 (223)
T ss_pred EEEEECCCHHHHHHHHHHHhCCCEEEEEcCCCCHHHH---HHHhCCCEEEEeCCC-ChHHhC-----CCcEEEEC-CCCH
Confidence 6889999999988888888888888887787754432 333333333332222 444442 33444433 2221
Q ss_pred CcccccHHHHHHHHHHcCCEE-EEeCC
Q 016612 152 RQQICDIRKIAEMAHAHGALL-LVDNS 177 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~l-i~D~a 177 (386)
.-=++|.+.|++.++++ ++|+.
T Consensus 97 ----~vN~~I~~~a~~~~~lvn~vd~p 119 (223)
T PRK05562 97 ----KLNNKIRKHCDRLYKLYIDCSDY 119 (223)
T ss_pred ----HHHHHHHHHHHHcCCeEEEcCCc
Confidence 11278999999987644 45665
No 418
>cd02067 B12-binding B12 binding domain (B12-BD). This domain binds different cobalamid derivates, like B12 (adenosylcobamide) or methylcobalamin or methyl-Co(III) 5-hydroxybenzimidazolylcobamide, it is found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase. Cobalamin undergoes a conformational change on binding the protein; the dimethylbenzimidazole group, which is coordinated to the cobalt in the free cofactor, moves away from the corrin and is replaced by a histidine contributed by the protein. The sequence Asp-X-His-X-X-Gly, which contains this histidine ligand, is conserved in many cobalamin-binding proteins.
Probab=58.51 E-value=54 Score=24.70 Aligned_cols=86 Identities=14% Similarity=0.173 Sum_probs=50.4
Q ss_pred HHhhhcccCCcEEEEeCCC-CHHHHHhhh-CCCceEEEEeCCCCCCcccccHHHHHHHHHHc---CCEEEEeCCCCCCCc
Q 016612 109 LLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAH---GALLLVDNSIMSPVL 183 (386)
Q Consensus 109 ~~~~~~~~~g~~~~~v~~~-d~~~l~~~~-~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~---~~~li~D~a~~~~~~ 183 (386)
.+...++..|.++...... .++++.+.+ ..++++|.++.... .....++++.+.+++. ++.+++=+.......
T Consensus 18 ~~~~~l~~~G~~V~~lg~~~~~~~l~~~~~~~~pdvV~iS~~~~--~~~~~~~~~i~~l~~~~~~~~~i~vGG~~~~~~~ 95 (119)
T cd02067 18 IVARALRDAGFEVIDLGVDVPPEEIVEAAKEEDADAIGLSGLLT--THMTLMKEVIEELKEAGLDDIPVLVGGAIVTRDF 95 (119)
T ss_pred HHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHHcCCCCCeEEEECCCCChhH
Confidence 3456778899998776644 566666554 46788888865432 2335567777777775 455666554332211
Q ss_pred cCCCCCCccEEEe
Q 016612 184 SRPLELGADIVMH 196 (386)
Q Consensus 184 ~~~~~~~~di~~~ 196 (386)
......|.|.++.
T Consensus 96 ~~~~~~G~D~~~~ 108 (119)
T cd02067 96 KFLKEIGVDAYFG 108 (119)
T ss_pred HHHHHcCCeEEEC
Confidence 1122346666554
No 419
>TIGR01305 GMP_reduct_1 guanosine monophosphate reductase, eukaryotic. A deep split separates two families of GMP reductase. This family includes both eukaryotic and some proteobacterial sequences, while the other family contains other bacterial sequences.
Probab=57.85 E-value=1.6e+02 Score=27.17 Aligned_cols=125 Identities=18% Similarity=0.170 Sum_probs=74.0
Q ss_pred eEEeCcHH-HH-HHHHHHhcCC--CCEEEecCCCCCcHHHHH---hhhcccC-CcEEEEeCCCCHHHHHhhhCCCceEEE
Q 016612 73 ALCFTSGM-AA-LAAVTHLLGT--GEEIVAGDDLYGGTDRLL---SRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVW 144 (386)
Q Consensus 73 ~i~~~~gt-~a-l~~~~~~~~~--g~~Vlv~~~~~~~~~~~~---~~~~~~~-g~~~~~v~~~d~~~l~~~~~~~~~~v~ 144 (386)
.+.++.|+ +. ..-+..+++. +-.+++-+..|+-....+ ..+.+.+ +..++-=...++++.+.++......|.
T Consensus 97 ~~~vsvG~~~~d~er~~~L~~a~~~~d~iviD~AhGhs~~~i~~ik~ir~~~p~~~viaGNV~T~e~a~~Li~aGAD~ik 176 (343)
T TIGR01305 97 NVAVSSGSSDNDLEKMTSILEAVPQLKFICLDVANGYSEHFVEFVKLVREAFPEHTIMAGNVVTGEMVEELILSGADIVK 176 (343)
T ss_pred eEEEEeccCHHHHHHHHHHHhcCCCCCEEEEECCCCcHHHHHHHHHHHHhhCCCCeEEEecccCHHHHHHHHHcCCCEEE
Confidence 44456665 33 5556556544 455677677776544333 2333333 344444445588888888887777777
Q ss_pred Ee--CCCCCCcccc-----c----HHHHHHHHHHcCCEEEEeCCCCC-CCccCCCCCCccEEEec
Q 016612 145 VE--SPTNPRQQIC-----D----IRKIAEMAHAHGALLLVDNSIMS-PVLSRPLELGADIVMHS 197 (386)
Q Consensus 145 ~~--~~~nptG~~~-----~----l~~i~~la~~~~~~li~D~a~~~-~~~~~~~~~~~di~~~S 197 (386)
+. ..+|-++... | +.++++.++++++.+|.|.-... +.....+..|+|.+...
T Consensus 177 VgiGpGSicttR~~~Gvg~pqltAv~~~a~aa~~~~v~VIaDGGIr~~gDI~KALA~GAd~VMlG 241 (343)
T TIGR01305 177 VGIGPGSVCTTRTKTGVGYPQLSAVIECADAAHGLKGHIISDGGCTCPGDVAKAFGAGADFVMLG 241 (343)
T ss_pred EcccCCCcccCceeCCCCcCHHHHHHHHHHHhccCCCeEEEcCCcCchhHHHHHHHcCCCEEEEC
Confidence 65 3344444442 3 45555666667899999998654 33445566788876543
No 420
>PF04989 CmcI: Cephalosporin hydroxylase; InterPro: IPR007072 This entry contains Rhamnosyl O-methyltransferase which catalyses the O-methylation of the hydroxyl group located on C-2 of the first rhamnosyl residue linked to the phenolic group of glycosylated phenolphthiocerol dimycocerosates (PGL) and p-hydroxybenzoic acid derivatives (p-HBAD) []. Members of this family are about 220 amino acids long. It also includes the CmcI protein O85726 from SWISSPROT, which is presumed to represent the cephalosporin-7--hydroxylase []. However this has not been experimentally verified.; GO: 0008168 methyltransferase activity, 0008610 lipid biosynthetic process; PDB: 2BR4_B 2BR3_E 2BR5_E 2BM8_J 2BM9_E.
Probab=56.95 E-value=37 Score=28.73 Aligned_cols=97 Identities=15% Similarity=0.223 Sum_probs=45.4
Q ss_pred CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhccc----CCcEEEEeCCCCHHHHHhhhC----CCceEEEEeC
Q 016612 77 TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK----TGVVVKRVNTCDLDEVASAIG----PWTKLVWVES 147 (386)
Q Consensus 77 ~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~----~g~~~~~v~~~d~~~l~~~~~----~~~~~v~~~~ 147 (386)
.+|+.... .++.++.+..+|+.-+..-.... +...+. ..+++..-+..|++.+.+.-. .++-+|+.++
T Consensus 43 ~GGSli~~A~ml~~~~~~~~VigiDIdir~~~---~~a~e~hp~~~rI~~i~Gds~d~~~~~~v~~~~~~~~~vlVilDs 119 (206)
T PF04989_consen 43 HGGSLIFWASMLELLGGKGKVIGIDIDIRPHN---RKAIESHPMSPRITFIQGDSIDPEIVDQVRELASPPHPVLVILDS 119 (206)
T ss_dssp TSHHHHHHHHHHHHTT---EEEEEES-GTT-----S-GGGG----TTEEEEES-SSSTHHHHTSGSS----SSEEEEESS
T ss_pred CCchHHHHHHHHHHhCCCceEEEEeCCcchhc---hHHHhhccccCceEEEECCCCCHHHHHHHHHhhccCCceEEEECC
Confidence 34454444 46777755567775555332222 122333 567777777778888876533 3455666665
Q ss_pred CCCCCcccccHHHHHHHHHHcCCEE-EEeCC
Q 016612 148 PTNPRQQICDIRKIAEMAHAHGALL-LVDNS 177 (386)
Q Consensus 148 ~~nptG~~~~l~~i~~la~~~~~~l-i~D~a 177 (386)
-|...=....++....+... |-++ |.|..
T Consensus 120 ~H~~~hvl~eL~~y~plv~~-G~Y~IVeDt~ 149 (206)
T PF04989_consen 120 SHTHEHVLAELEAYAPLVSP-GSYLIVEDTI 149 (206)
T ss_dssp ----SSHHHHHHHHHHT--T-T-EEEETSHH
T ss_pred CccHHHHHHHHHHhCccCCC-CCEEEEEecc
Confidence 55433233356666666665 5554 45544
No 421
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=56.67 E-value=1.1e+02 Score=28.88 Aligned_cols=106 Identities=19% Similarity=0.221 Sum_probs=64.2
Q ss_pred ceEEeCcHHHHHHHHHHhcCCC-CEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCHHHHHhhhCCCceEEEEeCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~ 148 (386)
+++++++|.-+-.++..+.+.| ..|.+.+-+-.... ++.... .++...++..|.+++.+++++. .+|+-..|
T Consensus 3 ~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~----~i~~~~~~~v~~~~vD~~d~~al~~li~~~-d~VIn~~p 77 (389)
T COG1748 3 KILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCA----RIAELIGGKVEALQVDAADVDALVALIKDF-DLVINAAP 77 (389)
T ss_pred cEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHH----HHHhhccccceeEEecccChHHHHHHHhcC-CEEEEeCC
Confidence 5678888875554444444555 45665554433332 332222 5677778888999999999855 56654444
Q ss_pred CCCCcccc------------------cHHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 149 TNPRQQIC------------------DIRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 149 ~nptG~~~------------------~l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
.+-+-.+. +..++.+.|++.|+..+.+.-+..|.
T Consensus 78 ~~~~~~i~ka~i~~gv~yvDts~~~~~~~~~~~~a~~Agit~v~~~G~dPGi 129 (389)
T COG1748 78 PFVDLTILKACIKTGVDYVDTSYYEEPPWKLDEEAKKAGITAVLGCGFDPGI 129 (389)
T ss_pred chhhHHHHHHHHHhCCCEEEcccCCchhhhhhHHHHHcCeEEEcccCcCcch
Confidence 33221111 23567788888888888887776554
No 422
>cd02068 radical_SAM_B12_BD B12 binding domain_like associated with radical SAM domain. This domain shows similarity with B12 (adenosylcobamide) binding domains found in several enzymes, such as glutamate mutase, methionine synthase and methylmalonyl-CoA mutase, but it lacks the signature motif Asp-X-His-X-X-Gly, which contains the histidine that acts as a cobalt ligand. The function of this domain remains unclear.
Probab=56.44 E-value=73 Score=24.31 Aligned_cols=66 Identities=15% Similarity=0.207 Sum_probs=43.9
Q ss_pred hhcccCCcEEEEeCCCCHHHHHhhhC--CCceEEEEeCCCCCCcccccHHHHHHHHHHcC--CEEEEeCCCCC
Q 016612 112 RVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMS 180 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~~d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~--~~li~D~a~~~ 180 (386)
.+++..|.++...+....++..+.+. .++++|.++.. +.......++.+..|+.+ +.+++-+.+..
T Consensus 10 a~l~~~g~~v~~~~~~~~~~~~~~~~~~~~pdiv~~S~~---~~~~~~~~~~~~~ik~~~p~~~iv~GG~~~t 79 (127)
T cd02068 10 AVLEDAGFIVAEHDVLSADDIVEDIKELLKPDVVGISLM---TSAIYEALELAKIAKEVLPNVIVVVGGPHAT 79 (127)
T ss_pred HHHHHCCCeeeecCCCCHHHHHHHHHHhcCCCEEEEeec---cccHHHHHHHHHHHHHHCCCCEEEECCcchh
Confidence 45566677777777665555555554 57888888742 233346677888888864 88888777654
No 423
>TIGR00511 ribulose_e2b2 ribose-1,5-bisphosphate isomerase, e2b2 family. The delineation of this family was based originally, in part, on a discussion and neighbor-joining phylogenetic study by Kyrpides and Woese of archaeal and other proteins homologous to the alpha, beta, and delta subunits of eukaryotic initiation factor 2B (eIF-2B), a five-subunit molecule that catalyzes GTP recycling for eIF-2. Recently, Sato, et al. assigned the function ribulose-1,5 bisphosphate isomerase.
Probab=55.67 E-value=1.1e+02 Score=27.70 Aligned_cols=97 Identities=13% Similarity=0.134 Sum_probs=50.4
Q ss_pred ceEEeCcHHHH-HHHHHHhcCCC--CEEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 72 RALCFTSGMAA-LAAVTHLLGTG--EEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~a-l~~~~~~~~~g--~~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+.|++-+.+.. ...+....+.| -+|++.+ |.+.+.. ....+...|+++..++......+.+ +...|++-
T Consensus 117 ~~ILT~~~S~tv~~~l~~a~~~~~~f~V~v~EsrP~~~G~~--~a~~L~~~gI~vtlI~Dsa~~~~m~----~vd~VivG 190 (301)
T TIGR00511 117 DVVMTHCNSEAALSVIKTAFEQGKDIEVIATETRPRKQGHI--TAKELRDYGIPVTLIVDSAVRYFMK----EVDHVVVG 190 (301)
T ss_pred CEEEEECCcHHHHHHHHHHHHcCCcEEEEEecCCCcchHHH--HHHHHHHCCCCEEEEehhHHHHHHH----hCCEEEEC
Confidence 45666555533 34444443333 3455443 4444422 2344557888888886433333332 34455542
Q ss_pred -CCCCCCccccc---HHHHHHHHHHcCCEEEE
Q 016612 147 -SPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 147 -~~~nptG~~~~---l~~i~~la~~~~~~li~ 174 (386)
.--...|.+.. --.++-+|+.+++++++
T Consensus 191 ad~v~~nG~v~nkiGT~~lA~~Ak~~~vPv~V 222 (301)
T TIGR00511 191 ADAITANGALINKIGTSQLALAAREARVPFMV 222 (301)
T ss_pred ccEEecCCCEEEHHhHHHHHHHHHHhCCCEEE
Confidence 22222354443 35677788888888876
No 424
>PTZ00314 inosine-5'-monophosphate dehydrogenase; Provisional
Probab=55.60 E-value=1.1e+02 Score=30.11 Aligned_cols=116 Identities=17% Similarity=0.227 Sum_probs=68.7
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHH---HHhhhcccC-CcEEEEeCCCCHHHHHhhhCCCceEEEEe-CCCC-----
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDR---LLSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVE-SPTN----- 150 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~---~~~~~~~~~-g~~~~~v~~~d~~~l~~~~~~~~~~v~~~-~~~n----- 150 (386)
+.+..+.++++.|-.+++-+..|+.... .++.+.+.+ ++.+.-=...+.++.+.+++.....|.+. .|..
T Consensus 241 ~~~~~~~~l~~ag~d~i~id~a~G~s~~~~~~i~~ik~~~~~~~v~aG~V~t~~~a~~~~~aGad~I~vg~g~Gs~~~t~ 320 (495)
T PTZ00314 241 EDIERAAALIEAGVDVLVVDSSQGNSIYQIDMIKKLKSNYPHVDIIAGNVVTADQAKNLIDAGADGLRIGMGSGSICITQ 320 (495)
T ss_pred HHHHHHHHHHHCCCCEEEEecCCCCchHHHHHHHHHHhhCCCceEEECCcCCHHHHHHHHHcCCCEEEECCcCCcccccc
Confidence 4455666677777777766666553332 233444443 33433334457788888887777777653 2211
Q ss_pred -CCccccc----HHHHHHHHHHcCCEEEEeCCCCCCC-ccCCCCCCccEEEe
Q 016612 151 -PRQQICD----IRKIAEMAHAHGALLLVDNSIMSPV-LSRPLELGADIVMH 196 (386)
Q Consensus 151 -ptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~-~~~~~~~~~di~~~ 196 (386)
.+|.-.| +.++.+.|+++++.+|.|.-...+. .......|+|.+..
T Consensus 321 ~~~~~g~p~~~ai~~~~~~~~~~~v~vIadGGi~~~~di~kAla~GA~~Vm~ 372 (495)
T PTZ00314 321 EVCAVGRPQASAVYHVARYARERGVPCIADGGIKNSGDICKALALGADCVML 372 (495)
T ss_pred hhccCCCChHHHHHHHHHHHhhcCCeEEecCCCCCHHHHHHHHHcCCCEEEE
Confidence 1111222 5678888899999999998865543 33445678886654
No 425
>KOG4589 consensus Cell division protein FtsJ [Cell cycle control, cell division, chromosome partitioning]
Probab=54.88 E-value=93 Score=25.98 Aligned_cols=40 Identities=15% Similarity=0.118 Sum_probs=27.4
Q ss_pred CHHHHHh---hhC-CCceEEEEeCCCCCCcccc-cHHHHHHHHHH
Q 016612 128 DLDEVAS---AIG-PWTKLVWVESPTNPRQQIC-DIRKIAEMAHA 167 (386)
Q Consensus 128 d~~~l~~---~~~-~~~~~v~~~~~~nptG~~~-~l~~i~~la~~ 167 (386)
|++...+ ++. .+..+|+-+-..|+||.-. |-..+.++|..
T Consensus 121 dp~~~~ki~e~lp~r~VdvVlSDMapnaTGvr~~Dh~~~i~LC~s 165 (232)
T KOG4589|consen 121 DPETYRKIFEALPNRPVDVVLSDMAPNATGVRIRDHYRSIELCDS 165 (232)
T ss_pred CHHHHHHHHHhCCCCcccEEEeccCCCCcCcchhhHHHHHHHHHH
Confidence 5554443 333 3456776666679999885 88889999975
No 426
>PTZ00081 enolase; Provisional
Probab=53.52 E-value=90 Score=30.00 Aligned_cols=90 Identities=13% Similarity=0.123 Sum_probs=60.9
Q ss_pred HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCC--CCHHHHHhhhCCCc-eEEEEeCCCCCCcccccH
Q 016612 84 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGPWT-KLVWVESPTNPRQQICDI 158 (386)
Q Consensus 84 ~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~~~~~~-~~v~~~~~~nptG~~~~l 158 (386)
.....++++=+.+.+.+|....-...|..+.+..| +.+..-+. .++..+.+.+..+. ..+.+. + |..|.+.+.
T Consensus 288 ~~~~~~l~~y~I~~IEDPl~~~D~eg~~~Lt~~lg~~i~IvgDE~~~tn~~~l~~~I~~~aad~i~iK-v-nqiGGITe~ 365 (439)
T PTZ00081 288 ELYLDLVKKYPIVSIEDPFDQDDWEAYAKLTAAIGQKVQIVGDDLLVTNPTRIKKAIEKKACNALLLK-V-NQIGTVTEA 365 (439)
T ss_pred HHHHHHHhcCCcEEEEcCCCcccHHHHHHHHHhhCCCceEEcCCcccCCHHHHHHHHHhCCCCEEEec-c-ccccCHHHH
Confidence 34445666655678899987665666667776663 44444432 36888888887443 444433 2 336888999
Q ss_pred HHHHHHHHHcCCEEEEe
Q 016612 159 RKIAEMAHAHGALLLVD 175 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D 175 (386)
.+++++|+++|+.+++=
T Consensus 366 l~~a~lA~~~Gi~~iis 382 (439)
T PTZ00081 366 IEAAKLAQKNGWGVMVS 382 (439)
T ss_pred HHHHHHHHHcCCcEEEe
Confidence 99999999999887773
No 427
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=53.40 E-value=64 Score=31.01 Aligned_cols=94 Identities=17% Similarity=0.126 Sum_probs=54.6
Q ss_pred CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCC-CcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC
Q 016612 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLY-GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 71 ~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~-~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
..++++++|..++.+...+.+.|..|.+.+... ......... +...|+++...+..+ +. ..+..+|+.+.
T Consensus 6 k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~-l~~~~~~~~~~~~~~--~~----~~~~d~vv~~~-- 76 (450)
T PRK14106 6 KKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEE-LGELGIELVLGEYPE--EF----LEGVDLVVVSP-- 76 (450)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHH-HHhcCCEEEeCCcch--hH----hhcCCEEEECC--
Confidence 356777777777877777889999998877653 222211122 234466644333222 21 12455666432
Q ss_pred CCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 150 NPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
|.. +-..+...|+++|++++.+-.
T Consensus 77 ---g~~-~~~~~~~~a~~~~i~~~~~~~ 100 (450)
T PRK14106 77 ---GVP-LDSPPVVQAHKKGIEVIGEVE 100 (450)
T ss_pred ---CCC-CCCHHHHHHHHCCCcEEeHHH
Confidence 222 234467778889998887655
No 428
>TIGR01060 eno phosphopyruvate hydratase. Alternate name: enolase
Probab=53.39 E-value=90 Score=29.88 Aligned_cols=92 Identities=11% Similarity=0.075 Sum_probs=60.5
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCC--CCHHHHHhhhCCC-ceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~~~~~-~~~v~~~~~~nptG~~ 155 (386)
+++..+..++.+=+.+.+.+|....-...|..+.+.. .+.+..-+. .++.++++.+..+ ..++.+.. |..|.+
T Consensus 266 eai~~~~~lle~~~i~~iEdPl~~~D~~~~~~L~~~~~~~ipI~gDE~~~t~~~~~~~~i~~~a~d~v~ik~--~~iGGI 343 (425)
T TIGR01060 266 EMIEYYKELVEKYPIVSIEDGLSEEDWEGWAELTKELGDKVQIVGDDLFVTNTEILREGIEMGVANSILIKP--NQIGTL 343 (425)
T ss_pred HHHHHHHHHHhcCCcEEEEcCCCcccHHHHHHHHHhcCCCCeEEeCCCcccCHHHHHHHHHhCCCCEEEecc--cccCCH
Confidence 4444444455443466789998765555566666666 455544443 2688888888743 44554433 447999
Q ss_pred ccHHHHHHHHHHcCCEEEE
Q 016612 156 CDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~ 174 (386)
.+..+++++|+++|+.+++
T Consensus 344 tea~~ia~lA~~~Gi~~vv 362 (425)
T TIGR01060 344 TETLDAVELAKKAGYTAVI 362 (425)
T ss_pred HHHHHHHHHHHHcCCcEEE
Confidence 9999999999999987553
No 429
>PRK08535 translation initiation factor IF-2B subunit delta; Provisional
Probab=53.37 E-value=1.2e+02 Score=27.57 Aligned_cols=97 Identities=15% Similarity=0.157 Sum_probs=52.3
Q ss_pred ceEEeCcHHHH-HHHHHHhcCCC--CEEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 72 RALCFTSGMAA-LAAVTHLLGTG--EEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~a-l~~~~~~~~~g--~~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+.|++-+.+.. +..+....+.| -+|++.+ |...+.. ....+...|+++..+.......+.+ ++..|++-
T Consensus 122 ~~ILT~~~S~tv~~~l~~A~~~~k~~~V~v~EsrP~~~G~~--~a~~L~~~GI~vtlI~Dsav~~~m~----~vd~VivG 195 (310)
T PRK08535 122 DVIMTHCNSSAALSVIKTAHEQGKDIEVIATETRPRNQGHI--TAKELAEYGIPVTLIVDSAVRYFMK----DVDKVVVG 195 (310)
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEecCCchhhHHH--HHHHHHHCCCCEEEEehhHHHHHHH----hCCEEEEC
Confidence 45666555533 34454444333 3555543 4444422 2244557789888887544444433 34555552
Q ss_pred -CCCCCCccccc---HHHHHHHHHHcCCEEEE
Q 016612 147 -SPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 147 -~~~nptG~~~~---l~~i~~la~~~~~~li~ 174 (386)
..-...|.+.. --.++-+|+.+++++++
T Consensus 196 Ad~v~~nG~v~nkiGT~~~A~~Ak~~~vPv~V 227 (310)
T PRK08535 196 ADAITANGAVINKIGTSQIALAAHEARVPFMV 227 (310)
T ss_pred ccEEecCCCEEeHHhHHHHHHHHHHhCCCEEE
Confidence 22223455543 35677788889988876
No 430
>PF10678 DUF2492: Protein of unknown function (DUF2492); InterPro: IPR019620 This entry describes a family of small cytosolic proteins, about 80 amino acids in length, in which the eight invariant residues include three His residues and two Cys residues. Two pairs of these invariant residues occur in motifs HxH (where x is A or G) and CxH, both of which suggest metal-binding activity. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulphatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulphur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulphatase/maturase systems.
Probab=52.98 E-value=23 Score=24.65 Aligned_cols=51 Identities=20% Similarity=0.320 Sum_probs=32.6
Q ss_pred CCc-hHHHHHHHHHhhcCCCceEEeCcHH-HHHHHHHHhcCCCCEEEecCCCC
Q 016612 53 GNP-TRDALESLLAKLDKADRALCFTSGM-AALAAVTHLLGTGEEIVAGDDLY 103 (386)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~~~~i~~~~gt-~al~~~~~~~~~g~~Vlv~~~~~ 103 (386)
|.| .+++|.+.+.+.||.+...-+.|+. -....+..++...++++..+..+
T Consensus 17 ~~~~t~~~L~~ai~~~FG~~arFhTCSae~m~a~eLv~FL~~rgKfi~~~~g~ 69 (78)
T PF10678_consen 17 GNPYTKEELKAAIIEKFGEDARFHTCSAEGMTADELVDFLEERGKFIPSDDGF 69 (78)
T ss_pred CCCcCHHHHHHHHHHHhCCCceEEecCCCCCCHHHHHHHHHHcCCEeecCCCE
Confidence 555 6889999999999998777666654 22345555443334455444444
No 431
>cd00532 MGS-like MGS-like domain. This domain composes the whole protein of methylglyoxal synthetase, which catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The family also includes the C-terminal domain in carbamoyl phosphate synthetase (CPS) where it catalyzes the last phosphorylation of a coaboxyphosphate intermediate to form the product carbamoyl phosphate and may also play a regulatory role. This family also includes inosine monophosphate cyclohydrolase. The known structures in this family show a common phosphate binding site.
Probab=52.60 E-value=94 Score=23.21 Aligned_cols=84 Identities=21% Similarity=0.169 Sum_probs=44.2
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---CHHHHHhhhCC--CceEEEEe-CCCCCCcccccH
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---DLDEVASAIGP--WTKLVWVE-SPTNPRQQICDI 158 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---d~~~l~~~~~~--~~~~v~~~-~~~nptG~~~~l 158 (386)
.+..+...|-+++.+.. +. ..++..|+++..+... .-.++.+.+.+ +..+|+.. .+.+......+-
T Consensus 17 ~a~~l~~~G~~i~AT~g----Ta----~~L~~~Gi~~~~v~~~~~~g~~~i~~~i~~~g~idlVIn~~~~~~~~~~~~dg 88 (112)
T cd00532 17 LAPKLSSDGFPLFATGG----TS----RVLADAGIPVRAVSKRHEDGEPTVDAAIAEKGKFDVVINLRDPRRDRCTDEDG 88 (112)
T ss_pred HHHHHHHCCCEEEECcH----HH----HHHHHcCCceEEEEecCCCCCcHHHHHHhCCCCEEEEEEcCCCCcccccCCCh
Confidence 33334455656655432 22 2333466665554321 11334444444 55555432 222222234467
Q ss_pred HHHHHHHHHcCCEEEEeC
Q 016612 159 RKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~ 176 (386)
..|.+.|.+++++++.+-
T Consensus 89 ~~iRR~A~~~~Ip~~T~~ 106 (112)
T cd00532 89 TALLRLARLYKIPVTTPN 106 (112)
T ss_pred HHHHHHHHHcCCCEEECH
Confidence 899999999999998763
No 432
>PF14258 DUF4350: Domain of unknown function (DUF4350)
Probab=52.16 E-value=69 Score=21.43 Aligned_cols=62 Identities=16% Similarity=0.167 Sum_probs=35.8
Q ss_pred HHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEe
Q 016612 109 LLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 109 ~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D 175 (386)
++...++..|.++..+... .+.+.. .+..++++....+.+- -.++++|.++.++-|-++|+|
T Consensus 9 a~~~~L~~~g~~v~~~~~~-~~~l~~---~~~tll~i~~~~~~~~-~~~~~~l~~~v~~G~~lvl~a 70 (70)
T PF14258_consen 9 ALYQLLEEQGVKVERWRKP-YEALEA---DDGTLLVIGPDLRLSE-PEEAEALLEWVEAGNTLVLAA 70 (70)
T ss_pred HHHHHHHHCCCeeEEeccc-HHHhCC---CCCEEEEEeCCCCCCc-hHHHHHHHHHHHcCCEEEEeC
Confidence 3446667778888776653 444432 3333444433323221 245788999998777777764
No 433
>PF07085 DRTGG: DRTGG domain; InterPro: IPR010766 This presumed domain is about 120 amino acids in length. It is found associated with CBS domains IPR000644 from INTERPRO, as well as the CbiA domain IPR002586 from INTERPRO. The function of this domain is unknown. It is named the DRTGG domain after some of the most conserved residues. This domain may be very distantly related to a pair of CBS domains. There are no significant sequence similarities, but its length and association with CBS domains supports this idea. ; PDB: 3L31_B 3L2B_A 2IOJ_A.
Probab=51.57 E-value=69 Score=23.54 Aligned_cols=49 Identities=12% Similarity=0.025 Sum_probs=31.2
Q ss_pred EEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 120 VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 120 ~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
.++-++.+..+-+..++....++++++.... +-+.+.++|++.++.++.
T Consensus 42 ~lvIt~gdR~di~~~a~~~~i~~iIltg~~~------~~~~v~~la~~~~i~vi~ 90 (105)
T PF07085_consen 42 DLVITPGDREDIQLAAIEAGIACIILTGGLE------PSEEVLELAKELGIPVIS 90 (105)
T ss_dssp EEEEEETT-HHHHHHHCCTTECEEEEETT----------HHHHHHHHHHT-EEEE
T ss_pred eEEEEeCCcHHHHHHHHHhCCCEEEEeCCCC------CCHHHHHHHHHCCCEEEE
Confidence 3444444556666667776788888875433 448999999999988875
No 434
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=51.56 E-value=92 Score=27.32 Aligned_cols=89 Identities=21% Similarity=0.175 Sum_probs=46.2
Q ss_pred EEeCcHH-HHHHHHHHhcCCCCEEEecC-CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCC
Q 016612 74 LCFTSGM-AALAAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTN 150 (386)
Q Consensus 74 i~~~~gt-~al~~~~~~~~~g~~Vlv~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~n 150 (386)
|.+-+|| ++-.++..+.+.|..|+++- ..|.. ....+.++..-.+.|.+++++.+. +++++|+ + .++
T Consensus 5 IlvlgGT~egr~la~~L~~~g~~v~~Svat~~g~--------~~~~~~~v~~G~l~~~~~l~~~l~~~~i~~VI-D-ATH 74 (248)
T PRK08057 5 ILLLGGTSEARALARALAAAGVDIVLSLAGRTGG--------PADLPGPVRVGGFGGAEGLAAYLREEGIDLVI-D-ATH 74 (248)
T ss_pred EEEEechHHHHHHHHHHHhCCCeEEEEEccCCCC--------cccCCceEEECCCCCHHHHHHHHHHCCCCEEE-E-CCC
Confidence 4455565 88776666666677666433 23432 223455554444447777777775 4455543 2 222
Q ss_pred CCcccccHHHHHHHHHHcCCEEE
Q 016612 151 PRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li 173 (386)
|-.... -+-+.+.|++.|+..+
T Consensus 75 PfA~~i-s~~a~~ac~~~~ipyi 96 (248)
T PRK08057 75 PYAAQI-SANAAAACRALGIPYL 96 (248)
T ss_pred ccHHHH-HHHHHHHHHHhCCcEE
Confidence 211111 1345566666665544
No 435
>PRK06372 translation initiation factor IF-2B subunit delta; Provisional
Probab=51.54 E-value=1.7e+02 Score=25.74 Aligned_cols=97 Identities=13% Similarity=0.068 Sum_probs=52.1
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe-CC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE-SP 148 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~-~~ 148 (386)
+.|++-+.+..+..++...+++.+|++.+ |.+.+.. +...+...|+++..++-.....+ + ++...+++- ..
T Consensus 88 dvILT~s~S~~v~~~l~~~~~~~~V~v~ESrP~~eG~~--~a~~L~~~GI~vtli~Dsa~~~~---m-~~vd~VlvGAd~ 161 (253)
T PRK06372 88 SVIGTISSSQVLKAFISSSEKIKSVYILESRPMLEGID--MAKLLVKSGIDVVLLTDASMCEA---V-LNVDAVIVGSDS 161 (253)
T ss_pred CEEEEeCCcHHHHHHHHhcCCCCEEEEecCCCchHHHH--HHHHHHHCCCCEEEEehhHHHHH---H-HhCCEEEECccE
Confidence 45555554455554443344445676654 5554432 23444567888877763322222 2 235555552 22
Q ss_pred CCCCccccc---HHHHHHHHHHcCCEEEE
Q 016612 149 TNPRQQICD---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 149 ~nptG~~~~---l~~i~~la~~~~~~li~ 174 (386)
-...|.+.. -..++-.|+++++++++
T Consensus 162 V~~nG~v~nkvGT~~~Al~A~~~~vPv~V 190 (253)
T PRK06372 162 VLYDGGLIHKNGTFPLALCARYLKKPFYS 190 (253)
T ss_pred EecCCCEeehhhHHHHHHHHHHcCCCEEE
Confidence 122355543 35677778999998887
No 436
>TIGR02026 BchE magnesium-protoporphyrin IX monomethyl ester anaerobic oxidative cyclase. This model respresents the cobalamin-dependent oxidative cyclase responsible for forming the distinctive E-ring of the chlorin ring system under anaerobic conditions. This step is essential in the biosynthesis of both bacteriochlorophyll and chlorophyll under anaerobic conditions (a separate enzyme, AcsF, acts under aerobic conditions). This model identifies two clades of sequences, one from photosynthetic, non-cyanobacterial bacteria and another including Synechocystis and several non-photosynthetic bacteria. The function of the Synechocystis gene is supported by gene clustering with other photosynthetic genes, so the purpose of the gene in the non-photosynthetic bacteria is uncertain. Note that homologs of this gene are not found in plants which rely solely on the aerobic cyclase.
Probab=51.41 E-value=82 Score=30.87 Aligned_cols=83 Identities=11% Similarity=0.119 Sum_probs=53.2
Q ss_pred hhcccCC-cEEEEeCCC----CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCc
Q 016612 112 RVTPKTG-VVVKRVNTC----DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVL 183 (386)
Q Consensus 112 ~~~~~~g-~~~~~v~~~----d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~ 183 (386)
..++..| .++..++.. +.+++.+.+. .++++|.++.. |.......++++.+++. ++.+|+-+.+.....
T Consensus 30 a~L~~~G~~~V~iiD~~~~~~~~~~~~~~l~~~~pdvVgis~~---t~~~~~a~~~~~~~k~~~P~~~iV~GG~h~t~~~ 106 (497)
T TIGR02026 30 GALLDAGYHDVTFLDAMTGPLTDEKLVERLRAHCPDLVLITAI---TPAIYIACETLKFARERLPNAIIVLGGIHPTFMF 106 (497)
T ss_pred HHHHhcCCcceEEecccccCCCHHHHHHHHHhcCcCEEEEecC---cccHHHHHHHHHHHHHHCCCCEEEEcCCCcCcCH
Confidence 4456778 677777753 5667776664 57888888643 33445567888888876 999999888765433
Q ss_pred cCCCC--CCccEEEec
Q 016612 184 SRPLE--LGADIVMHS 197 (386)
Q Consensus 184 ~~~~~--~~~di~~~S 197 (386)
...+. ...|+++..
T Consensus 107 ~~~l~~~p~vD~Vv~G 122 (497)
T TIGR02026 107 HQVLTEAPWIDFIVRG 122 (497)
T ss_pred HHHHhcCCCccEEEeC
Confidence 22221 245655443
No 437
>COG1184 GCD2 Translation initiation factor 2B subunit, eIF-2B alpha/beta/delta family [Translation, ribosomal structure and biogenesis]
Probab=51.10 E-value=1.9e+02 Score=26.18 Aligned_cols=97 Identities=11% Similarity=0.126 Sum_probs=54.7
Q ss_pred ceEEeCcHHHHH-HHHHHhcCCCC--EEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 72 RALCFTSGMAAL-AAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~al-~~~~~~~~~g~--~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+.|++-+.+.++ ..+....++|. +|+|.+ |.+.+.. +.+.++..|+++..+.-. +....++ +...|++-
T Consensus 121 ~~IlTh~~S~~v~~~l~~A~~~~k~~~V~VtESRP~~eG~~--~ak~L~~~gI~~~~I~Ds---a~~~~~~-~vd~VivG 194 (301)
T COG1184 121 DVILTHSFSKTVLEVLKTAADRGKRFKVIVTESRPRGEGRI--MAKELRQSGIPVTVIVDS---AVGAFMS-RVDKVLVG 194 (301)
T ss_pred CEEEEecCcHHHHHHHHHhhhcCCceEEEEEcCCCcchHHH--HHHHHHHcCCceEEEech---HHHHHHH-hCCEEEEC
Confidence 566666666555 45665666665 566543 6665442 346677889888777632 1222222 33344431
Q ss_pred -CCCCCCccccc---HHHHHHHHHHcCCEEEE
Q 016612 147 -SPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 147 -~~~nptG~~~~---l~~i~~la~~~~~~li~ 174 (386)
..---.|.+.+ --.|+..||+.+.++++
T Consensus 195 ad~I~~nG~lvnkiGT~~lA~~A~e~~~Pf~v 226 (301)
T COG1184 195 ADAILANGALVNKIGTSPLALAARELRVPFYV 226 (301)
T ss_pred ccceecCCcEEeccchHHHHHHHHHhCCCEEE
Confidence 11111244433 35688889999887775
No 438
>PRK00077 eno enolase; Provisional
Probab=50.72 E-value=1.1e+02 Score=29.38 Aligned_cols=89 Identities=15% Similarity=0.106 Sum_probs=59.2
Q ss_pred HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCC--CCHHHHHhhhCCC-ceEEEEeCCCCCCcccccH
Q 016612 84 AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 84 ~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~l 158 (386)
..+..++.+=+.+.+.+|....-...+..+.+..| +.+..-+. .++.++.+.+..+ ..++.+.. |..|.+.+.
T Consensus 268 ~~~~~l~e~y~i~~iEdPl~~~D~~g~~~L~~~~~~~ipI~gdE~~~t~~~~~~~~i~~~a~d~v~ik~--~~~GGitea 345 (425)
T PRK00077 268 DYLAELVDKYPIVSIEDGLDENDWEGWKLLTEKLGDKVQLVGDDLFVTNTKRLKKGIEKGAANSILIKV--NQIGTLTET 345 (425)
T ss_pred HHHHHHHhhCCcEEEEcCCCCccHHHHHHHHHhcCCCCeEEcCCCccCCHHHHHHHHHhCCCCEEEeCc--cccCCHHHH
Confidence 34445566545678999987655555556666654 55544442 3688888888743 44554433 336899999
Q ss_pred HHHHHHHHHcCCEEEE
Q 016612 159 RKIAEMAHAHGALLLV 174 (386)
Q Consensus 159 ~~i~~la~~~~~~li~ 174 (386)
.+++++|+++|+.+++
T Consensus 346 ~~ia~lA~~~gi~~~v 361 (425)
T PRK00077 346 LDAIELAKRAGYTAVV 361 (425)
T ss_pred HHHHHHHHHcCCeEEE
Confidence 9999999999986664
No 439
>PF02603 Hpr_kinase_N: HPr Serine kinase N terminus; InterPro: IPR011126 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents the N-terminal region of Hpr Serine/threonine kinase PtsK. This kinase is the sensor in a multicomponent phosphorelay system in control of carbon catabolic repression in bacteria []. This kinase in unusual in that it recognises the tertiary structure of its target and is a member of a novel family unrelated to any previously described protein phosphorylating enzymes []. X-ray analysis of the full-length crystalline enzyme from Staphylococcus xylosus at a resolution of 1.95 A shows the enzyme to consist of two clearly separated domains that are assembled in a hexameric structure resembling a three-bladed propeller. The blades are formed by two N-terminal domains each, and the compact central hub assembles the C-terminal kinase domains []. ; GO: 0000155 two-component sensor activity, 0004672 protein kinase activity, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay), 0006109 regulation of carbohydrate metabolic process; PDB: 1KNX_B 1KO7_A.
Probab=50.55 E-value=30 Score=26.69 Aligned_cols=38 Identities=13% Similarity=0.047 Sum_probs=24.7
Q ss_pred HHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 131 ~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
.+++.+..++.+++++.-.. +-+.+.++|++++++|+.
T Consensus 73 ~l~~l~~~~~P~iIvt~~~~------~p~~l~e~a~~~~ipll~ 110 (127)
T PF02603_consen 73 RLEKLFSYNPPCIIVTRGLE------PPPELIELAEKYNIPLLR 110 (127)
T ss_dssp HHHHHCTTT-S-EEEETTT---------HHHHHHHHHCT--EEE
T ss_pred HHHHHhCCCCCEEEEECcCC------CCHHHHHHHHHhCCcEEE
Confidence 45666667888888886553 348999999999998875
No 440
>PRK02261 methylaspartate mutase subunit S; Provisional
Probab=50.24 E-value=1.2e+02 Score=23.81 Aligned_cols=69 Identities=20% Similarity=0.215 Sum_probs=45.3
Q ss_pred HHHHhhhcccCCcEEEEeCCC-CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHc---CCEEEEeCC
Q 016612 107 DRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAH---GALLLVDNS 177 (386)
Q Consensus 107 ~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~---~~~li~D~a 177 (386)
...+...++..|.++++.-.. .++++.+.+. .++++|.++.... .....++++.+..++. ++.+++=.+
T Consensus 20 ~~iv~~~lr~~G~eVi~LG~~vp~e~i~~~a~~~~~d~V~lS~~~~--~~~~~~~~~~~~L~~~~~~~~~i~vGG~ 93 (137)
T PRK02261 20 NKILDRALTEAGFEVINLGVMTSQEEFIDAAIETDADAILVSSLYG--HGEIDCRGLREKCIEAGLGDILLYVGGN 93 (137)
T ss_pred HHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEcCccc--cCHHHHHHHHHHHHhcCCCCCeEEEECC
Confidence 334556788899999988865 5677776654 6888888876554 2334567777777765 444554443
No 441
>cd03313 enolase Enolase: Enolases are homodimeric enzymes that catalyse the reversible dehydration of 2-phospho-D-glycerate to phosphoenolpyruvate as part of the glycolytic and gluconeogenesis pathways. The reaction is facilitated by the presence of metal ions.
Probab=50.18 E-value=98 Score=29.45 Aligned_cols=92 Identities=9% Similarity=0.072 Sum_probs=60.5
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCC--CCHHHHHhhhCCC-ceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~~~~~-~~~v~~~~~~nptG~~ 155 (386)
+++..+..++.+=+.+.+.+|....-...|..+.+.. .+.+..-+. .++.++.+.+..+ ...+.+. ++ ..|.+
T Consensus 265 eai~~~~~l~e~~~i~~iEdPl~~~D~eg~~~L~~~~g~~ipi~gdE~~~~~~~~~~~~i~~~a~d~v~ik-~~-~iGGi 342 (408)
T cd03313 265 ELIDYYKELVKKYPIVSIEDPFDEDDWEGWAKLTAKLGDKIQIVGDDLFVTNPERLKKGIEKKAANALLIK-VN-QIGTL 342 (408)
T ss_pred HHHHHHHHHHHhCCcEEEEeCCCCcCHHHHHHHHHhcCCCCeEEcCCcccCCHHHHHHHHHhCCCCEEEEc-cc-ccCCH
Confidence 4444455566544567789998765555566666665 444444342 3788888888744 3444433 32 36889
Q ss_pred ccHHHHHHHHHHcCCEEEE
Q 016612 156 CDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~ 174 (386)
.+..+++++|+++|+.+++
T Consensus 343 te~~~ia~lA~~~G~~~~~ 361 (408)
T cd03313 343 TETIEAIKLAKKNGYGVVV 361 (408)
T ss_pred HHHHHHHHHHHHcCCeEEc
Confidence 9999999999999988764
No 442
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=50.07 E-value=52 Score=24.46 Aligned_cols=84 Identities=17% Similarity=0.042 Sum_probs=50.1
Q ss_pred EEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCc
Q 016612 74 LCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQ 153 (386)
Q Consensus 74 i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG 153 (386)
++++.|.-+..++..+.+.+..|++-+...... ..+...|..+..-+..|.+.|+++--++.+.+++...+-
T Consensus 2 vI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~-----~~~~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d--- 73 (116)
T PF02254_consen 2 VIIGYGRIGREIAEQLKEGGIDVVVIDRDPERV-----EELREEGVEVIYGDATDPEVLERAGIEKADAVVILTDDD--- 73 (116)
T ss_dssp EEES-SHHHHHHHHHHHHTTSEEEEEESSHHHH-----HHHHHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSH---
T ss_pred EEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHH-----HHHHhcccccccccchhhhHHhhcCccccCEEEEccCCH---
Confidence 566667666666666666554555544443222 334466788888888899999987546777777665421
Q ss_pred ccccHHHHHHHHHH
Q 016612 154 QICDIRKIAEMAHA 167 (386)
Q Consensus 154 ~~~~l~~i~~la~~ 167 (386)
..--.++..+++
T Consensus 74 --~~n~~~~~~~r~ 85 (116)
T PF02254_consen 74 --EENLLIALLARE 85 (116)
T ss_dssp --HHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHH
Confidence 112345556665
No 443
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=48.00 E-value=92 Score=27.33 Aligned_cols=24 Identities=13% Similarity=0.232 Sum_probs=16.4
Q ss_pred EEeCcHH-HHHHHHHHhcCCCCEEEe
Q 016612 74 LCFTSGM-AALAAVTHLLGTGEEIVA 98 (386)
Q Consensus 74 i~~~~gt-~al~~~~~~~~~g~~Vlv 98 (386)
|++-+|| ++-.++..+...|. |++
T Consensus 3 ILvlgGTtE~r~la~~L~~~g~-v~~ 27 (249)
T PF02571_consen 3 ILVLGGTTEGRKLAERLAEAGY-VIV 27 (249)
T ss_pred EEEEechHHHHHHHHHHHhcCC-EEE
Confidence 4444565 88887777888887 554
No 444
>COG0552 FtsY Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=47.41 E-value=92 Score=28.53 Aligned_cols=131 Identities=18% Similarity=0.255 Sum_probs=78.0
Q ss_pred HHHHHHH-HHhcCCCCEEEecCC-CCC-cHHHHHhhhcccCCcEEEEeCC-CCHH-----HHHhhhCCCceEEEEeCC--
Q 016612 80 MAALAAV-THLLGTGEEIVAGDD-LYG-GTDRLLSRVTPKTGVVVKRVNT-CDLD-----EVASAIGPWTKLVWVESP-- 148 (386)
Q Consensus 80 t~al~~~-~~~~~~g~~Vlv~~~-~~~-~~~~~~~~~~~~~g~~~~~v~~-~d~~-----~l~~~~~~~~~~v~~~~~-- 148 (386)
|..+.-+ ..+.+.|..|++... +|- +-..-+..+.++.|++++.... .|+. .++.+...+..+|+++..
T Consensus 153 TTTIaKLA~~l~~~g~~VllaA~DTFRAaAiEQL~~w~er~gv~vI~~~~G~DpAaVafDAi~~Akar~~DvvliDTAGR 232 (340)
T COG0552 153 TTTIAKLAKYLKQQGKSVLLAAGDTFRAAAIEQLEVWGERLGVPVISGKEGADPAAVAFDAIQAAKARGIDVVLIDTAGR 232 (340)
T ss_pred HhHHHHHHHHHHHCCCeEEEEecchHHHHHHHHHHHHHHHhCCeEEccCCCCCcHHHHHHHHHHHHHcCCCEEEEeCccc
Confidence 4556543 346678888876443 331 1111234557788888887542 2554 555666678999999853
Q ss_pred -CCCCcccccHHHHHHHHHHcC------CEEEEeCCCCCCCccC----CCCCCccEEEeccccccccCCCceEEEEEE
Q 016612 149 -TNPRQQICDIRKIAEMAHAHG------ALLLVDNSIMSPVLSR----PLELGADIVMHSATKFIAGHSDVMAGVLAV 215 (386)
Q Consensus 149 -~nptG~~~~l~~i~~la~~~~------~~li~D~a~~~~~~~~----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~ 215 (386)
||-..-...+++|.+++++.. ++++.|...+...+.. ....+.|-++ ++|.=+. -++|.++.
T Consensus 233 Lhnk~nLM~EL~KI~rV~~k~~~~ap~e~llvlDAttGqnal~QAk~F~eav~l~GiI--lTKlDgt---AKGG~il~ 305 (340)
T COG0552 233 LHNKKNLMDELKKIVRVIKKDDPDAPHEILLVLDATTGQNALSQAKIFNEAVGLDGII--LTKLDGT---AKGGIILS 305 (340)
T ss_pred ccCchhHHHHHHHHHHHhccccCCCCceEEEEEEcccChhHHHHHHHHHHhcCCceEE--EEecccC---CCcceeee
Confidence 554444457999999998864 7777799876433321 1122445444 3675422 24677764
No 445
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=47.15 E-value=76 Score=26.01 Aligned_cols=20 Identities=30% Similarity=0.288 Sum_probs=8.3
Q ss_pred CCcEEEEeCCCCHHHHHhhh
Q 016612 117 TGVVVKRVNTCDLDEVASAI 136 (386)
Q Consensus 117 ~g~~~~~v~~~d~~~l~~~~ 136 (386)
.|.++..+...+.++++..+
T Consensus 99 l~~~i~~~~~~~~~e~~~~i 118 (176)
T PF06506_consen 99 LGVDIKIYPYDSEEEIEAAI 118 (176)
T ss_dssp HT-EEEEEEESSHHHHHHHH
T ss_pred hCCceEEEEECCHHHHHHHH
Confidence 34444444444444444333
No 446
>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=46.67 E-value=90 Score=30.33 Aligned_cols=94 Identities=21% Similarity=0.185 Sum_probs=51.9
Q ss_pred CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 71 ~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
..+++++.|..++.++..+.+.|..|.+.+..-..........++..|+++..-.. .+ ......+|+++..-.
T Consensus 17 ~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l~~~gv~~~~~~~--~~-----~~~~~D~Vv~s~Gi~ 89 (480)
T PRK01438 17 LRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAILEALGATVRLGPG--PT-----LPEDTDLVVTSPGWR 89 (480)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHHHHcCCEEEECCC--cc-----ccCCCCEEEECCCcC
Confidence 36788898988887766667788888765432111111112335566877643221 11 122456676553222
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
| + ..+...|++.|+.++-|--
T Consensus 90 ~-----~-~~~~~~a~~~gi~v~~~~e 110 (480)
T PRK01438 90 P-----D-APLLAAAADAGIPVWGEVE 110 (480)
T ss_pred C-----C-CHHHHHHHHCCCeecchHH
Confidence 2 2 2345566778888865533
No 447
>PRK05993 short chain dehydrogenase; Provisional
Probab=45.78 E-value=1.3e+02 Score=26.42 Aligned_cols=69 Identities=9% Similarity=0.126 Sum_probs=39.6
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-------CCceEE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-------PWTKLV 143 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-------~~~~~v 143 (386)
.+++++|+.++ .++..+.+.|..|++..-.-... ..+ ...++++...+..|.+++++.++ .+..++
T Consensus 6 ~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~----~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~l 80 (277)
T PRK05993 6 SILITGCSSGIGAYCARALQSDGWRVFATCRKEEDV----AAL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDAL 80 (277)
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HHH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEE
Confidence 46667666665 45556778888887654321111 122 23466777777778777665543 245566
Q ss_pred EEe
Q 016612 144 WVE 146 (386)
Q Consensus 144 ~~~ 146 (386)
+-+
T Consensus 81 i~~ 83 (277)
T PRK05993 81 FNN 83 (277)
T ss_pred EEC
Confidence 544
No 448
>COG2984 ABC-type uncharacterized transport system, periplasmic component [General function prediction only]
Probab=45.65 E-value=1.4e+02 Score=27.19 Aligned_cols=66 Identities=14% Similarity=0.239 Sum_probs=48.4
Q ss_pred HHhhhcccCCcEEEEeCCC---CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 109 LLSRVTPKTGVVVKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 109 ~~~~~~~~~g~~~~~v~~~---d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
.+...++..|+++++.... |.....+.+..++.+|++..-++ ...-.+.+...+.+.+++++.++.
T Consensus 179 elk~~A~~~Gl~vve~~v~~~ndi~~a~~~l~g~~d~i~~p~dn~---i~s~~~~l~~~a~~~kiPli~sd~ 247 (322)
T COG2984 179 ELKKEARKAGLEVVEAAVTSVNDIPRAVQALLGKVDVIYIPTDNL---IVSAIESLLQVANKAKIPLIASDT 247 (322)
T ss_pred HHHHHHHHCCCEEEEEecCcccccHHHHHHhcCCCcEEEEecchH---HHHHHHHHHHHHHHhCCCeecCCH
Confidence 3567789999999998875 44444555567888888764433 223578888999999999998776
No 449
>TIGR03853 matur_matur probable metal-binding protein. This protein family was identified by searching with a phylogenetic profile based on an anaerobic sulfatase-maturase enzyme, which contains multiple 4Fe-4S clusters. The linkages by phylogenetic profiling and by iron-sulfur cluster-related motifs together suggest this protein may be an accessory protein to certain maturases in sulfatase/maturase systems.
Probab=45.63 E-value=39 Score=23.44 Aligned_cols=50 Identities=20% Similarity=0.354 Sum_probs=31.5
Q ss_pred CCc-hHHHHHHHHHhhcCCCceEEeCcHH-HHHHHHHHh-cCCCCEEEecCCCC
Q 016612 53 GNP-TRDALESLLAKLDKADRALCFTSGM-AALAAVTHL-LGTGEEIVAGDDLY 103 (386)
Q Consensus 53 g~~-~~~~l~~~l~~~~g~~~~i~~~~gt-~al~~~~~~-~~~g~~Vlv~~~~~ 103 (386)
|.| .+++|++.+.+.||.+...-+.|.. -....++.+ .++|+ ++-.+..+
T Consensus 15 ~~~~t~~~L~~~i~~~FG~~arFhTCSa~~m~a~~Li~FL~~kgK-fi~~~~gf 67 (77)
T TIGR03853 15 GEPYTRESLKAAIEQKFGEDARFHTCSAEGMTADELLQFLLKKGK-FIESDGGF 67 (77)
T ss_pred CCCcCHHHHHHHHHHHhCCCceEeecccccCCHHHHHHHHHHCCC-EeecCCcE
Confidence 555 6889999999999988666665543 223455554 45554 44444444
No 450
>PLN02476 O-methyltransferase
Probab=45.36 E-value=1.6e+02 Score=26.41 Aligned_cols=119 Identities=18% Similarity=0.240 Sum_probs=57.8
Q ss_pred HHHHHHHHhhcCCCceEEeCc--HHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE--EEEeCCCCH-HHH
Q 016612 58 DALESLLAKLDKADRALCFTS--GMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTCDL-DEV 132 (386)
Q Consensus 58 ~~l~~~l~~~~g~~~~i~~~~--gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~d~-~~l 132 (386)
.++...+.+..++..++=+++ |.+++.+..+ +.++..|+..+..- ......+..++..|.. +..+. .|. +.|
T Consensus 107 g~lL~~L~~~~~ak~VLEIGT~tGySal~lA~a-l~~~G~V~TiE~d~-e~~~~Ar~n~~~aGl~~~I~li~-GdA~e~L 183 (278)
T PLN02476 107 AQLLAMLVQILGAERCIEVGVYTGYSSLAVALV-LPESGCLVACERDS-NSLEVAKRYYELAGVSHKVNVKH-GLAAESL 183 (278)
T ss_pred HHHHHHHHHhcCCCeEEEecCCCCHHHHHHHHh-CCCCCEEEEEECCH-HHHHHHHHHHHHcCCCCcEEEEE-cCHHHHH
Confidence 334444445555555443333 3455544433 34444555444322 2223334555566653 32222 233 333
Q ss_pred Hhhh----CCCceEEEEeCCCCCCccccc-HHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 133 ASAI----GPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 133 ~~~~----~~~~~~v~~~~~~nptG~~~~-l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
.+.. .....+|+++..- +.+.+ ++.+.++.+ .|.+|++|++...|..
T Consensus 184 ~~l~~~~~~~~FD~VFIDa~K---~~Y~~y~e~~l~lL~-~GGvIV~DNvL~~G~V 235 (278)
T PLN02476 184 KSMIQNGEGSSYDFAFVDADK---RMYQDYFELLLQLVR-VGGVIVMDNVLWHGRV 235 (278)
T ss_pred HHHHhcccCCCCCEEEECCCH---HHHHHHHHHHHHhcC-CCcEEEEecCccCCcc
Confidence 3322 1356788887652 22222 444455444 3777888999766554
No 451
>PF00265 TK: Thymidine kinase; InterPro: IPR001267 Thymidine kinase (TK) (2.7.1.21 from EC) is an ubiquitous enzyme that catalyzes the ATP-dependent phosphorylation of thymidine. Two different families of Thymidine kinase have been identified [, ] and are represented in this entry; one groups together Thymidine kinase from herpesviruses, as well as cytosolic thymidylate kinases and the second family groups Thymidine kinase from various sources that include, vertebrates, bacteria, the Bacteriophage T4, poxviruses, African swine fever virus (ASFV) and Fish lymphocystis disease virus (FLDV). The major capsid protein of insect iridescent viruses also belongs to this family.; GO: 0004797 thymidine kinase activity, 0005524 ATP binding; PDB: 1XX6_B 2J9R_A 2J87_B 3E2I_A 2JA1_A 2UZ3_B 2B8T_B 2WVJ_A 1W4R_F 1XBT_F ....
Probab=45.02 E-value=69 Score=26.36 Aligned_cols=91 Identities=8% Similarity=0.116 Sum_probs=55.6
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe--CCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v--~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
+.+..+..+-..|.+|++..|....-.. -..+..+.|.....+ +..+..++...+..++.+|.++-.+.-+ .++
T Consensus 17 eLi~~~~~~~~~~~~v~~~kp~~D~R~~-~~~I~s~~g~~~~~~~~~~~~~~~~~~~~~~~~dvI~IDEaQFf~---~~i 92 (176)
T PF00265_consen 17 ELIRRIHRYEIAGKKVLVFKPAIDTRYG-EDKIVSHDGISLEAIVDPIDNLFEIIDILENDYDVIGIDEAQFFD---EQI 92 (176)
T ss_dssp HHHHHHHHHHHTT-EEEEEEESTSCCCC-SSEEEHTTSCEEEEESSEESSGGGGGGGCCTTCSEEEESSGGGST---TTH
T ss_pred HHHHHHHHHHhCCCeEEEEEecccCcCC-CCeEEecCCCcccccccchhhHHHHHHHhccCCCEEEEechHhhH---HHH
Confidence 3344454444566777765543211100 013455667766666 4456777777777679999998877654 467
Q ss_pred HHHHHHHHHcCCEEEEe
Q 016612 159 RKIAEMAHAHGALLLVD 175 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D 175 (386)
.++.+.+.++|+.|++=
T Consensus 93 ~~l~~~~~~~g~~Vi~~ 109 (176)
T PF00265_consen 93 VQLVEILANKGIPVICA 109 (176)
T ss_dssp HHHHHHHHHTT-EEEEE
T ss_pred HHHHHHHHhCCCeEEEE
Confidence 78888888899998863
No 452
>CHL00194 ycf39 Ycf39; Provisional
Probab=44.96 E-value=1.4e+02 Score=27.04 Aligned_cols=91 Identities=12% Similarity=0.039 Sum_probs=51.2
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
+++++|| -+-+++..+++.|.+|.+..-.- ... ......+++++..+..|.+.+.+++.. ..+|+-.....+
T Consensus 3 IlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~-~~~----~~l~~~~v~~v~~Dl~d~~~l~~al~g-~d~Vi~~~~~~~ 76 (317)
T CHL00194 3 LLVIGATGTLGRQIVRQALDEGYQVRCLVRNL-RKA----SFLKEWGAELVYGDLSLPETLPPSFKG-VTAIIDASTSRP 76 (317)
T ss_pred EEEECCCcHHHHHHHHHHHHCCCeEEEEEcCh-HHh----hhHhhcCCEEEECCCCCHHHHHHHHCC-CCEEEECCCCCC
Confidence 4455544 44566777888887775332111 111 112235788888888899999988873 455553322111
Q ss_pred Cc--ccc--c---HHHHHHHHHHcCC
Q 016612 152 RQ--QIC--D---IRKIAEMAHAHGA 170 (386)
Q Consensus 152 tG--~~~--~---l~~i~~la~~~~~ 170 (386)
.. ... + ...+.+.|++.|+
T Consensus 77 ~~~~~~~~~~~~~~~~l~~aa~~~gv 102 (317)
T CHL00194 77 SDLYNAKQIDWDGKLALIEAAKAAKI 102 (317)
T ss_pred CCccchhhhhHHHHHHHHHHHHHcCC
Confidence 11 011 1 2568888888876
No 453
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=44.41 E-value=1.6e+02 Score=24.73 Aligned_cols=45 Identities=18% Similarity=0.104 Sum_probs=30.8
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
.+++...+++--++++++ +|.-.++....+.|+++|+.+|.=-.+
T Consensus 101 ~ql~~~~~~gDvli~iS~----SG~s~~v~~a~~~Ak~~G~~vI~IT~~ 145 (196)
T PRK10886 101 KQVRALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVALTGY 145 (196)
T ss_pred HHHHHcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 345555555555555554 466678899999999999988874333
No 454
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=43.82 E-value=83 Score=24.94 Aligned_cols=94 Identities=11% Similarity=0.148 Sum_probs=48.5
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCC-EEEecCCC--CCcHHHHHhhhcccCCcEEEEeC--CCCHHHHHhhhC------CC
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGE-EIVAGDDL--YGGTDRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG------PW 139 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~-~Vlv~~~~--~~~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~~~------~~ 139 (386)
.+++++|+.++ ..+..+++.|+ .|++.... -....... .-++..+.++..+. ..+.+++++.++ .+
T Consensus 2 ~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~-~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 2 TVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELI-QELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHH-HHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred EEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence 35667777666 45566777765 44433322 11111111 22223445555554 447777666654 35
Q ss_pred ceEEEEeCCCCCCccccc--HHHHHHHHHH
Q 016612 140 TKLVWVESPTNPRQQICD--IRKIAEMAHA 167 (386)
Q Consensus 140 ~~~v~~~~~~nptG~~~~--l~~i~~la~~ 167 (386)
...++.+......+...+ .+.+.+..+-
T Consensus 81 ld~li~~ag~~~~~~~~~~~~~~~~~~~~~ 110 (167)
T PF00106_consen 81 LDILINNAGIFSDGSLDDLSEEELERVFRV 110 (167)
T ss_dssp ESEEEEECSCTTSBSGGGSHHHHHHHHHHH
T ss_pred ccccccccccccccccccccchhhhhcccc
Confidence 667776655555555543 4555555443
No 455
>cd04736 MDH_FMN Mandelate dehydrogenase (MDH)-like FMN-binding domain. MDH is part of a widespread family of homologous FMN-dependent a-hydroxy acid oxidizing enzymes that oxidizes (S)-mandelate to phenylglyoxalate. MDH is an enzyme in the mandelate pathway that occurs in several strains of Pseudomonas which converts (R)-mandelate to benzoate. This family occurs in both prokaryotes and eukaryotes. Members of this family include flavocytochrome b2 (FCB2), glycolate oxidase (GOX), lactate monooxygenase (LMO), mandelate dehydrogenase (MDH), and long chain hydroxyacid oxidase (LCHAO).
Probab=43.80 E-value=82 Score=29.36 Aligned_cols=85 Identities=18% Similarity=0.154 Sum_probs=54.3
Q ss_pred hhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC--CCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-ccCCCC
Q 016612 112 RVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT--NPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-LSRPLE 188 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~--nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-~~~~~~ 188 (386)
.+.+.+...++.-...+.++.+.+++-..+.|++++.. +..+...+++.+.++++..++.||.|.-...|. ..+.+.
T Consensus 230 ~ir~~~~~pviiKgV~~~eda~~a~~~G~d~I~VSnhGGrqld~~~~~~~~L~ei~~~~~~~vi~dGGIr~g~Dv~KALa 309 (361)
T cd04736 230 WLRDLWPHKLLVKGIVTAEDAKRCIELGADGVILSNHGGRQLDDAIAPIEALAEIVAATYKPVLIDSGIRRGSDIVKALA 309 (361)
T ss_pred HHHHhCCCCEEEecCCCHHHHHHHHHCCcCEEEECCCCcCCCcCCccHHHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHH
Confidence 44445555554445568888888888888899876432 222222358888888887889999998765443 333445
Q ss_pred CCccEEEe
Q 016612 189 LGADIVMH 196 (386)
Q Consensus 189 ~~~di~~~ 196 (386)
.|+|.+..
T Consensus 310 LGA~aV~i 317 (361)
T cd04736 310 LGANAVLL 317 (361)
T ss_pred cCCCEEEE
Confidence 56665543
No 456
>PRK07102 short chain dehydrogenase; Provisional
Probab=43.36 E-value=1.4e+02 Score=25.63 Aligned_cols=73 Identities=11% Similarity=0.194 Sum_probs=38.5
Q ss_pred EEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCHHHHHhhhC---CCceEEEEe
Q 016612 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG---PWTKLVWVE 146 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~~~---~~~~~v~~~ 146 (386)
+++++|+.++ ..+..+++.|.+|++....-.............. .+++...+..|.+++++.++ .+...++.+
T Consensus 4 vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~d~vv~~ 83 (243)
T PRK07102 4 ILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLPALPDIVLIA 83 (243)
T ss_pred EEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHhhcCCEEEEC
Confidence 5667777665 4556678888887765443222222222222222 23445555567777776554 234555533
No 457
>PLN02274 inosine-5'-monophosphate dehydrogenase
Probab=43.16 E-value=1.7e+02 Score=28.79 Aligned_cols=115 Identities=20% Similarity=0.224 Sum_probs=71.3
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHH---HhhhcccC-CcEEEEeCCCCHHHHHhhhCCCceEEEEeC-CC----C-
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRL---LSRVTPKT-GVVVKRVNTCDLDEVASAIGPWTKLVWVES-PT----N- 150 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~---~~~~~~~~-g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~-~~----n- 150 (386)
.....+.++++.|-.|++-+..|+..... +..+.+.+ +..+..-+..+.++-+.+++....+|.+.. +. +
T Consensus 248 ~~~~r~~~l~~ag~d~i~iD~~~g~~~~~~~~i~~ik~~~p~~~vi~g~v~t~e~a~~a~~aGaD~i~vg~g~G~~~~t~ 327 (505)
T PLN02274 248 SDKERLEHLVKAGVDVVVLDSSQGDSIYQLEMIKYIKKTYPELDVIGGNVVTMYQAQNLIQAGVDGLRVGMGSGSICTTQ 327 (505)
T ss_pred cHHHHHHHHHHcCCCEEEEeCCCCCcHHHHHHHHHHHHhCCCCcEEEecCCCHHHHHHHHHcCcCEEEECCCCCccccCc
Confidence 45566666777776677666666554432 33344434 355555456688888888877777877631 11 1
Q ss_pred -CCccc----ccHHHHHHHHHHcCCEEEEeCCCCCC-CccCCCCCCccEEE
Q 016612 151 -PRQQI----CDIRKIAEMAHAHGALLLVDNSIMSP-VLSRPLELGADIVM 195 (386)
Q Consensus 151 -ptG~~----~~l~~i~~la~~~~~~li~D~a~~~~-~~~~~~~~~~di~~ 195 (386)
.+|.- ..+..+.+++++.++++|.|.-...+ .....+..|+|.+.
T Consensus 328 ~~~~~g~~~~~~i~~~~~~~~~~~vpVIadGGI~~~~di~kAla~GA~~V~ 378 (505)
T PLN02274 328 EVCAVGRGQATAVYKVASIAAQHGVPVIADGGISNSGHIVKALTLGASTVM 378 (505)
T ss_pred cccccCCCcccHHHHHHHHHHhcCCeEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 12221 24677888899999999999986543 23345566777554
No 458
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=43.15 E-value=1.4e+02 Score=26.56 Aligned_cols=89 Identities=21% Similarity=0.226 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCCCC--EEEecCCCCCcHHHHHhhhcccCCcE-EEEeCCCCHHHHHhhhCCCceEEEEe-CCCCCCcc
Q 016612 79 GMAALAAVTHLLGTGE--EIVAGDDLYGGTDRLLSRVTPKTGVV-VKRVNTCDLDEVASAIGPWTKLVWVE-SPTNPRQQ 154 (386)
Q Consensus 79 gt~al~~~~~~~~~g~--~Vlv~~~~~~~~~~~~~~~~~~~g~~-~~~v~~~d~~~l~~~~~~~~~~v~~~-~~~nptG~ 154 (386)
|.-+-+++..+++.|+ .|-+.+....... .......+.. +...+..|.++++++++. ...|+-. .+..+.+.
T Consensus 7 GflG~~iv~~Ll~~g~~~~Vr~~d~~~~~~~---~~~~~~~~~~~~~~~Di~d~~~l~~a~~g-~d~V~H~Aa~~~~~~~ 82 (280)
T PF01073_consen 7 GFLGSHIVRQLLERGYIYEVRVLDRSPPPKF---LKDLQKSGVKEYIQGDITDPESLEEALEG-VDVVFHTAAPVPPWGD 82 (280)
T ss_pred cHHHHHHHHHHHHCCCceEEEEccccccccc---chhhhcccceeEEEeccccHHHHHHHhcC-CceEEEeCccccccCc
Confidence 3456678888999884 5554433222111 0122233333 677777899999999874 4455544 44444442
Q ss_pred cc----------cHHHHHHHHHHcCCE
Q 016612 155 IC----------DIRKIAEMAHAHGAL 171 (386)
Q Consensus 155 ~~----------~l~~i~~la~~~~~~ 171 (386)
.. --+.|.+.|+++++.
T Consensus 83 ~~~~~~~~vNV~GT~nvl~aa~~~~Vk 109 (280)
T PF01073_consen 83 YPPEEYYKVNVDGTRNVLEAARKAGVK 109 (280)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 21 145688888887653
No 459
>PRK08309 short chain dehydrogenase; Provisional
Probab=42.83 E-value=1.9e+02 Score=23.76 Aligned_cols=92 Identities=11% Similarity=-0.009 Sum_probs=45.3
Q ss_pred EEeCcHHHHH-HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC------CceEEEEe
Q 016612 74 LCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP------WTKLVWVE 146 (386)
Q Consensus 74 i~~~~gt~al-~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~------~~~~v~~~ 146 (386)
+++++|+.-+ ..+..+.+.|..|.+..-.................+.....+..|.+++.+.+.. +.. +++.
T Consensus 3 vlVtGGtG~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id-~lv~ 81 (177)
T PRK08309 3 ALVIGGTGMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFD-LAVA 81 (177)
T ss_pred EEEECcCHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCe-EEEE
Confidence 4555566222 3445577888888764322111111111111112344444566688777766641 222 2333
Q ss_pred CCCCCCcccccHHHHHHHHHHcCCE
Q 016612 147 SPTNPRQQICDIRKIAEMAHAHGAL 171 (386)
Q Consensus 147 ~~~nptG~~~~l~~i~~la~~~~~~ 171 (386)
..+.. --+.+.++|++.|+.
T Consensus 82 ~vh~~-----~~~~~~~~~~~~gv~ 101 (177)
T PRK08309 82 WIHSS-----AKDALSVVCRELDGS 101 (177)
T ss_pred ecccc-----chhhHHHHHHHHccC
Confidence 32221 137888899988754
No 460
>COG0296 GlgB 1,4-alpha-glucan branching enzyme [Carbohydrate transport and metabolism]
Probab=42.79 E-value=25 Score=35.18 Aligned_cols=33 Identities=21% Similarity=0.266 Sum_probs=28.0
Q ss_pred CCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 147 SPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 147 ~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
.|++.-|.-.+++++++.||++||-||+|-+++
T Consensus 205 Ap~sryGtPedfk~fVD~aH~~GIgViLD~V~~ 237 (628)
T COG0296 205 APTSRYGTPEDFKALVDAAHQAGIGVILDWVPN 237 (628)
T ss_pred cccccCCCHHHHHHHHHHHHHcCCEEEEEecCC
Confidence 455666666679999999999999999999975
No 461
>smart00642 Aamy Alpha-amylase domain.
Probab=42.62 E-value=27 Score=28.44 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=24.4
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
.|...+++++++.||++|+.|++|-+.-
T Consensus 66 ~Gt~~d~~~lv~~~h~~Gi~vilD~V~N 93 (166)
T smart00642 66 FGTMEDFKELVDAAHARGIKVILDVVIN 93 (166)
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4666789999999999999999999954
No 462
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=42.41 E-value=2.3e+02 Score=26.55 Aligned_cols=90 Identities=19% Similarity=0.144 Sum_probs=49.1
Q ss_pred EEeCcHHHHHHHHHHhcCCCC--EEEecCCCCCcHHHHHhhhc---ccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCC
Q 016612 74 LCFTSGMAALAAVTHLLGTGE--EIVAGDDLYGGTDRLLSRVT---PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 74 i~~~~gt~al~~~~~~~~~g~--~Vlv~~~~~~~~~~~~~~~~---~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~ 148 (386)
+++++|.-+-.++..+.+.++ .|++.+-.-... .+.+ ....++...++..|.++|.+.+.+. ++|+-+.+
T Consensus 2 lvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~----~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~-dvVin~~g 76 (386)
T PF03435_consen 2 LVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKA----ERLAEKLLGDRVEAVQVDVNDPESLAELLRGC-DVVINCAG 76 (386)
T ss_dssp EEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHH----HHHHT--TTTTEEEEE--TTTHHHHHHHHTTS-SEEEE-SS
T ss_pred EEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHH----HHHHhhccccceeEEEEecCCHHHHHHHHhcC-CEEEECCc
Confidence 455556544444444544443 566655443222 2222 3456778888888999999988754 66664432
Q ss_pred CCCCcccccHHHHHHHHHHcCCEEEEe
Q 016612 149 TNPRQQICDIRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 149 ~nptG~~~~l~~i~~la~~~~~~li~D 175 (386)
.. .-..|.+.|.+.|+. ++|
T Consensus 77 p~------~~~~v~~~~i~~g~~-yvD 96 (386)
T PF03435_consen 77 PF------FGEPVARACIEAGVH-YVD 96 (386)
T ss_dssp GG------GHHHHHHHHHHHT-E-EEE
T ss_pred cc------hhHHHHHHHHHhCCC-eec
Confidence 22 235778888888776 455
No 463
>CHL00200 trpA tryptophan synthase alpha subunit; Provisional
Probab=42.39 E-value=1.4e+02 Score=26.45 Aligned_cols=50 Identities=20% Similarity=0.209 Sum_probs=22.5
Q ss_pred cccCCcEEEEeCCC---CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcC
Q 016612 114 TPKTGVVVKRVNTC---DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 114 ~~~~g~~~~~v~~~---d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~ 169 (386)
+...|++-+.++-. ..+++.+.++ .....|.+.+|+.| .++|..+++.-+
T Consensus 115 ~~~aGvdgviipDLP~ee~~~~~~~~~~~gi~~I~lv~PtT~------~eri~~i~~~a~ 168 (263)
T CHL00200 115 ISQAGVKGLIIPDLPYEESDYLISVCNLYNIELILLIAPTSS------KSRIQKIARAAP 168 (263)
T ss_pred HHHcCCeEEEecCCCHHHHHHHHHHHHHcCCCEEEEECCCCC------HHHHHHHHHhCC
Confidence 34555554444432 2223333332 34555655555543 245555555443
No 464
>PRK05234 mgsA methylglyoxal synthase; Validated
Probab=42.35 E-value=88 Score=24.72 Aligned_cols=48 Identities=8% Similarity=0.183 Sum_probs=30.6
Q ss_pred HHHHhhhC-CCceEEEEe-CCCCCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 130 DEVASAIG-PWTKLVWVE-SPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 130 ~~l~~~~~-~~~~~v~~~-~~~nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
.++.+.+. .+..+|+.. -|..+.+...+-..|.+.|-+++++++..-.
T Consensus 65 ~~i~~~I~~g~i~lVInt~dp~~~~~~~~D~~~IRR~Av~~~IP~~T~l~ 114 (142)
T PRK05234 65 QQIGALIAEGKIDMLIFFRDPLTAQPHDPDVKALLRLADVWNIPVATNRA 114 (142)
T ss_pred hhHHHHHHcCceeEEEEecCCCCCCcccchHHHHHHHHHHcCCCEEcCHH
Confidence 34555554 455555443 2245444355788999999999999886544
No 465
>COG1066 Sms Predicted ATP-dependent serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=41.41 E-value=3.2e+02 Score=26.04 Aligned_cols=85 Identities=9% Similarity=0.189 Sum_probs=51.1
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc---EEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCC---C-----cc
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV---VVKRVNTCDLDEVASAIG-PWTKLVWVESPTNP---R-----QQ 154 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~---~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~np---t-----G~ 154 (386)
..+.+.+ .||+-...-.... +..-+++.|+ .+......+++++.+.++ .+++++++++.+.. . |.
T Consensus 115 ~~lA~~~-~vLYVsGEES~~Q--iklRA~RL~~~~~~l~l~aEt~~e~I~~~l~~~~p~lvVIDSIQT~~s~~~~SapGs 191 (456)
T COG1066 115 ARLAKRG-KVLYVSGEESLQQ--IKLRADRLGLPTNNLYLLAETNLEDIIAELEQEKPDLVVIDSIQTLYSEEITSAPGS 191 (456)
T ss_pred HHHHhcC-cEEEEeCCcCHHH--HHHHHHHhCCCccceEEehhcCHHHHHHHHHhcCCCEEEEeccceeecccccCCCCc
Confidence 3345566 5664444333222 2233455553 333344458899988886 68889998866542 2 44
Q ss_pred ccc----HHHHHHHHHHcCCEEEE
Q 016612 155 ICD----IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 155 ~~~----l~~i~~la~~~~~~li~ 174 (386)
+.. -.+|.++|++.|+.+++
T Consensus 192 VsQVRe~t~~L~~~AK~~~i~~fi 215 (456)
T COG1066 192 VSQVREVAAELMRLAKTKNIAIFI 215 (456)
T ss_pred HHHHHHHHHHHHHHHHHcCCeEEE
Confidence 433 35688999999987765
No 466
>COG2185 Sbm Methylmalonyl-CoA mutase, C-terminal domain/subunit (cobalamin-binding) [Lipid metabolism]
Probab=41.27 E-value=78 Score=25.02 Aligned_cols=75 Identities=12% Similarity=0.146 Sum_probs=51.7
Q ss_pred CEEEecCCC---CCcHHHHHhhhcccCCcEEEEeCCC-CHHHH-HhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc
Q 016612 94 EEIVAGDDL---YGGTDRLLSRVTPKTGVVVKRVNTC-DLDEV-ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH 168 (386)
Q Consensus 94 ~~Vlv~~~~---~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l-~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~ 168 (386)
-+|++..+. |..-...+..+++..|++++..... .+++. .+++.++..+|.+++.+- +.....+.+.+.+++.
T Consensus 13 prvlvak~GlDgHd~gakvia~~l~d~GfeVi~~g~~~tp~e~v~aA~~~dv~vIgvSsl~g--~h~~l~~~lve~lre~ 90 (143)
T COG2185 13 PRVLVAKLGLDGHDRGAKVIARALADAGFEVINLGLFQTPEEAVRAAVEEDVDVIGVSSLDG--GHLTLVPGLVEALREA 90 (143)
T ss_pred ceEEEeccCccccccchHHHHHHHHhCCceEEecCCcCCHHHHHHHHHhcCCCEEEEEeccc--hHHHHHHHHHHHHHHh
Confidence 356655553 4333445568888999999888864 55554 455678888888876642 4445688999999998
Q ss_pred CC
Q 016612 169 GA 170 (386)
Q Consensus 169 ~~ 170 (386)
|.
T Consensus 91 G~ 92 (143)
T COG2185 91 GV 92 (143)
T ss_pred CC
Confidence 64
No 467
>TIGR03679 arCOG00187 arCOG00187 universal archaeal metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein. This model has the same scope as an archaeal COG (arCOG00187) and is found in all completely sequenced archaea and does not recognize any known non-archaeal genes.
Probab=41.04 E-value=2.3e+02 Score=24.21 Aligned_cols=54 Identities=15% Similarity=0.121 Sum_probs=29.4
Q ss_pred EEeCcHHHHHHHHHHhcCCCCEEE---ecCCC-------CCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 74 LCFTSGMAALAAVTHLLGTGEEIV---AGDDL-------YGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 74 i~~~~gt~al~~~~~~~~~g~~Vl---v~~~~-------~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
+.+++|-.+..++..+.+.|..|. +..+. |..-....+.+++..|++...++..
T Consensus 2 vl~SGGkDS~~al~~a~~~G~~v~~l~~~~~~~~~~~~~~~~~~~~~~~~A~~lgip~~~i~~~ 65 (218)
T TIGR03679 2 ALYSGGKDSNYALYKALEEGHEVRCLITVVPENEESYMFHTPNIELTRLQAEALGIPLVKIETS 65 (218)
T ss_pred eeecCcHHHHHHHHHHHHcCCEEEEEEEeccCCCCccccCCCCHHHHHHHHHHhCCCEEEEECC
Confidence 567888866555544455676652 21111 2122334456677777776666543
No 468
>cd04726 KGPDC_HPS 3-Keto-L-gulonate 6-phosphate decarboxylase (KGPDC) and D-arabino-3-hexulose-6-phosphate synthase (HPS). KGPDC catalyzes the formation of L-xylulose 5-phosphate and carbon dioxide from 3-keto-L-gulonate 6-phosphate as part of the anaerobic pathway for L-ascorbate utilization in some eubacteria. HPS catalyzes the formation of D-arabino-3-hexulose-6-phosphate from D-ribulose 5-phosphate and formaldehyde in microorganisms that can use formaldehyde as a carbon source. Both catalyze reactions that involve the Mg2+-assisted formation and stabilization of 1,2-enediolate reaction intermediates.
Probab=40.79 E-value=1.6e+02 Score=24.48 Aligned_cols=83 Identities=19% Similarity=0.187 Sum_probs=47.5
Q ss_pred hhcccCCcEEEE--eCCCCHHHHHhhhCCCceEEEEeCCCCCCcc---cccHHHHHHHHHHcCCEEEEeCCCCCCCccCC
Q 016612 112 RVTPKTGVVVKR--VNTCDLDEVASAIGPWTKLVWVESPTNPRQQ---ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP 186 (386)
Q Consensus 112 ~~~~~~g~~~~~--v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~---~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~ 186 (386)
+.++..|+.+.. ..+.++++..+........+.+. |...++. ....+.+.++.+..++.+++|.--........
T Consensus 97 ~~~~~~g~~~~v~~~~~~t~~e~~~~~~~~~d~v~~~-~~~~~~~~~~~~~~~~i~~~~~~~~~~i~~~GGI~~~~i~~~ 175 (202)
T cd04726 97 KAAKKYGKEVQVDLIGVEDPEKRAKLLKLGVDIVILH-RGIDAQAAGGWWPEDDLKKVKKLLGVKVAVAGGITPDTLPEF 175 (202)
T ss_pred HHHHHcCCeEEEEEeCCCCHHHHHHHHHCCCCEEEEc-CcccccccCCCCCHHHHHHHHhhcCCCEEEECCcCHHHHHHH
Confidence 556677887765 45567777766665566665552 2222222 23467777777657888888875432222223
Q ss_pred CCCCccEEE
Q 016612 187 LELGADIVM 195 (386)
Q Consensus 187 ~~~~~di~~ 195 (386)
.+.|+|.++
T Consensus 176 ~~~Gad~vv 184 (202)
T cd04726 176 KKAGADIVI 184 (202)
T ss_pred HhcCCCEEE
Confidence 345677554
No 469
>PRK05678 succinyl-CoA synthetase subunit alpha; Validated
Probab=40.67 E-value=1.1e+02 Score=27.60 Aligned_cols=72 Identities=14% Similarity=0.119 Sum_probs=42.6
Q ss_pred CCCCCcHHHHHhhhccc--CCcEEEEeCCC-CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeC
Q 016612 100 DDLYGGTDRLLSRVTPK--TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 100 ~~~~~~~~~~~~~~~~~--~g~~~~~v~~~-d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~ 176 (386)
-+.|++.. .+-+. -.+-++.+|.. -++.+++.....++.+++-+-..+ ..+-++|.++|+++|+.++==.
T Consensus 51 ~~~y~sv~----dlp~~~~~DlAvi~vp~~~v~~~l~e~~~~gvk~avI~s~Gf~---~~~~~~l~~~a~~~girvlGPN 123 (291)
T PRK05678 51 LPVFNTVA----EAVEATGANASVIYVPPPFAADAILEAIDAGIDLIVCITEGIP---VLDMLEVKAYLERKKTRLIGPN 123 (291)
T ss_pred eeccCCHH----HHhhccCCCEEEEEcCHHHHHHHHHHHHHCCCCEEEEECCCCC---HHHHHHHHHHHHHcCCEEECCC
Confidence 34565553 33332 34555555544 466777777777777665443221 1123489999999999887444
Q ss_pred CC
Q 016612 177 SI 178 (386)
Q Consensus 177 a~ 178 (386)
+.
T Consensus 124 c~ 125 (291)
T PRK05678 124 CP 125 (291)
T ss_pred CC
Confidence 43
No 470
>TIGR01501 MthylAspMutase methylaspartate mutase, S subunit. This model represents the S (sigma) subunit of methylaspartate mutase (glutamate mutase), a cobalamin-dependent enzyme that catalyzes the first step in a pathway of glutamate fermentation.
Probab=40.12 E-value=1.8e+02 Score=22.80 Aligned_cols=67 Identities=13% Similarity=0.134 Sum_probs=45.9
Q ss_pred CCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhh-CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCC
Q 016612 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGA 170 (386)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~-~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~ 170 (386)
.|.--...+..+++..|.+++....+ .++++.+.. .+++.+|.+++... .....++++.+.+++.|+
T Consensus 13 ~HdiGk~iv~~~l~~~GfeVi~LG~~v~~e~~v~aa~~~~adiVglS~l~~--~~~~~~~~~~~~l~~~gl 81 (134)
T TIGR01501 13 CHAVGNKILDHAFTNAGFNVVNLGVLSPQEEFIKAAIETKADAILVSSLYG--HGEIDCKGLRQKCDEAGL 81 (134)
T ss_pred hhhHhHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--cCHHHHHHHHHHHHHCCC
Confidence 34333444567788999999888765 667766554 57888988876652 333467888888888753
No 471
>PRK02705 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=39.99 E-value=2.6e+02 Score=26.93 Aligned_cols=97 Identities=19% Similarity=0.127 Sum_probs=51.1
Q ss_pred eEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCC
Q 016612 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPR 152 (386)
Q Consensus 73 ~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~npt 152 (386)
..+++.|-+++.+...+.+.|-.|.+.+-............++..|+++..-...+++.+...+. +..+|+++..-.
T Consensus 3 v~viG~G~sG~s~a~~l~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~g~~~~~~~~~~~~~-~~d~vv~s~gi~-- 79 (459)
T PRK02705 3 AHVIGLGRSGIAAARLLKAQGWEVVVSDRNDSPELLERQQELEQEGITVKLGKPLELESFQPWLD-QPDLVVVSPGIP-- 79 (459)
T ss_pred EEEEccCHHHHHHHHHHHHCCCEEEEECCCCchhhHHHHHHHHHcCCEEEECCccchhhhhHHhh-cCCEEEECCCCC--
Confidence 46777787888765556788988887775433222111122345677775433234443333333 455666632222
Q ss_pred cccccHHHHHHHHHHcCCEEEEeC
Q 016612 153 QQICDIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 153 G~~~~l~~i~~la~~~~~~li~D~ 176 (386)
.+ ..+...|++.|+.++-+-
T Consensus 80 ---~~-~~~~~~a~~~~i~v~~~~ 99 (459)
T PRK02705 80 ---WD-HPTLVELRERGIEVIGEI 99 (459)
T ss_pred ---CC-CHHHHHHHHcCCcEEEhH
Confidence 12 223444556666666544
No 472
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=39.58 E-value=1.4e+02 Score=26.47 Aligned_cols=64 Identities=16% Similarity=0.218 Sum_probs=35.1
Q ss_pred ceEEeCcHHHHHH--HHHHhcCCCCEEE-ecCCCCCcHHHHHhhhcccCCcEEEEeCC--CCHHHHHhhh
Q 016612 72 RALCFTSGMAALA--AVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAI 136 (386)
Q Consensus 72 ~~i~~~~gt~al~--~~~~~~~~g~~Vl-v~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~~ 136 (386)
..+++|+.+++|- ....+.++|.+|+ +.+-.- --.....++....++++..++. .+++++++..
T Consensus 7 ~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~-kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~ 75 (265)
T COG0300 7 KTALITGASSGIGAELAKQLARRGYNLILVARRED-KLEALAKELEDKTGVEVEVIPADLSDPEALERLE 75 (265)
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHH-HHHHHHHHHHHhhCceEEEEECcCCChhHHHHHH
Confidence 3567777778874 3444677787765 554422 2222234555556666555554 3555555443
No 473
>COG0159 TrpA Tryptophan synthase alpha chain [Amino acid transport and metabolism]
Probab=39.28 E-value=1.7e+02 Score=25.93 Aligned_cols=14 Identities=21% Similarity=0.439 Sum_probs=7.6
Q ss_pred CCceEEEEeCCCCC
Q 016612 138 PWTKLVWVESPTNP 151 (386)
Q Consensus 138 ~~~~~v~~~~~~np 151 (386)
...+.|.+..|+.+
T Consensus 146 ~gi~~I~lvaPtt~ 159 (265)
T COG0159 146 HGIDPIFLVAPTTP 159 (265)
T ss_pred cCCcEEEEeCCCCC
Confidence 34555665555543
No 474
>TIGR01019 sucCoAalpha succinyl-CoA synthetase, alpha subunit. ATP citrate lyases appear to form an outgroup.
Probab=38.72 E-value=1.1e+02 Score=27.42 Aligned_cols=75 Identities=19% Similarity=0.188 Sum_probs=43.8
Q ss_pred EecCCCCCcHHHHHhhhccc--CCcEEEEeCCC-CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 97 VAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTC-DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 97 lv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~-d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
+.--|.|++.. .+-+. -.+-++.+|.. -++.+++.....++.+++-+...+. .+-++|.++|+++|+.++
T Consensus 46 v~G~~~y~sv~----dlp~~~~~Dlavi~vpa~~v~~~l~e~~~~Gvk~avIis~Gf~e---~~~~~l~~~a~~~giril 118 (286)
T TIGR01019 46 VLGLPVFDSVK----EAVEETGANASVIFVPAPFAADAIFEAIDAGIELIVCITEGIPV---HDMLKVKRYMEESGTRLI 118 (286)
T ss_pred ecCeeccCCHH----HHhhccCCCEEEEecCHHHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEEE
Confidence 33344666654 22322 24455555544 3566777777777776664432211 134789999999999887
Q ss_pred EeCCC
Q 016612 174 VDNSI 178 (386)
Q Consensus 174 ~D~a~ 178 (386)
==.+.
T Consensus 119 GPNc~ 123 (286)
T TIGR01019 119 GPNCP 123 (286)
T ss_pred CCCCc
Confidence 44443
No 475
>PF01008 IF-2B: Initiation factor 2 subunit family; InterPro: IPR000649 Initiation factor 2 binds to Met-tRNA, GTP and the small ribosomal subunit. The eukaryotic translation initiation factor EIF-2B is a complex made up of five different subunits, alpha, beta, gamma, delta and epsilon, and catalyses the exchange of EIF-2-bound GDP for GTP. This family includes initiation factor 2B alpha, beta and delta subunits from eukaryotes; related proteins from archaebacteria and IF-2 from prokaryotes and also contains a subfamily of proteins in eukaryotes, archaeae (e.g. Pyrococcus furiosus), or eubacteria such as Bacillus subtilis and Thermotoga maritima. Many of these proteins were initially annotated as putative translation initiation factors despite the fact that there is no evidence for the requirement of an IF2 recycling factor in prokaryotic translation initiation. Recently, one of these proteins from B. subtilis has been functionally characterised as a 5-methylthioribose-1-phosphate isomerase (MTNA) []. This enzyme participates in the methionine salvage pathway catalysing the isomerisation of 5-methylthioribose-1-phosphate to 5-methylthioribulose-1-phosphate []. The methionine salvage pathway leads to the synthesis of methionine from methylthioadenosine, the end product of the spermidine and spermine anabolism in many species.; GO: 0044237 cellular metabolic process; PDB: 1VB5_A 1T5O_D 3A11_E 3VM6_C 1W2W_A 1T9K_A 3ECS_B 2YRF_A 2YVK_B 2A0U_A ....
Probab=38.67 E-value=2.7e+02 Score=24.76 Aligned_cols=100 Identities=10% Similarity=0.109 Sum_probs=50.1
Q ss_pred CceEEeCcHHHHH-HHHHHhcCCCC--EEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEE
Q 016612 71 DRALCFTSGMAAL-AAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (386)
Q Consensus 71 ~~~i~~~~gt~al-~~~~~~~~~g~--~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~ 145 (386)
.+.|++-+-+..+ ..+....+.|. +|+|.+ |...+. .+.+.+...|+++..++......+.+. +...|++
T Consensus 108 ~~~ILT~~~S~~v~~~l~~a~~~~~~~~V~v~es~P~~eG~--~~a~~L~~~gi~v~~i~d~~~~~~m~~---~vd~Vli 182 (282)
T PF01008_consen 108 GDTILTHGYSSTVERFLLSAKKKGKKFRVIVLESRPYNEGR--LMAKELAEAGIPVTLIPDSAVGYVMPR---DVDKVLI 182 (282)
T ss_dssp TEEEEEES--SHHHHHHHHHHHTTEEEEEEEE--TTTTHHH--THHHHHHHTT-EEEEE-GGGHHHHHHC---TESEEEE
T ss_pred CeEEEEeCCchHHHHHHHHHHHcCCeEEEEEccCCcchhhh--hHHHHhhhcceeEEEEechHHHHHHHH---hCCeeEE
Confidence 3555555555554 45555444442 455444 433331 222445568999988885454444443 2445554
Q ss_pred e-CCCCCCccccc---HHHHHHHHHHcCCEEEEe
Q 016612 146 E-SPTNPRQQICD---IRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 146 ~-~~~nptG~~~~---l~~i~~la~~~~~~li~D 175 (386)
- ..--..|.+.. -..++-+|+++++++++=
T Consensus 183 Gad~v~~nG~v~nk~Gt~~~a~~Ak~~~vPv~v~ 216 (282)
T PF01008_consen 183 GADAVLANGGVVNKVGTLQLALAAKEFNVPVYVL 216 (282)
T ss_dssp E-SEEETTS-EEEETTHHHHHHHHHHTT-EEEEE
T ss_pred eeeEEecCCCEeehhhHHHHHHHHHhhCCCEEEE
Confidence 2 22223455542 466777889999988874
No 476
>COG0031 CysK Cysteine synthase [Amino acid transport and metabolism]
Probab=38.42 E-value=72 Score=28.80 Aligned_cols=81 Identities=16% Similarity=0.215 Sum_probs=44.0
Q ss_pred eEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-C-----HHHHHhhhCCCce-EEEE
Q 016612 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-D-----LDEVASAIGPWTK-LVWV 145 (386)
Q Consensus 73 ~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d-----~~~l~~~~~~~~~-~v~~ 145 (386)
.|=.|||..++.+.+.....|-.+++.-|.-.+..+ +.+.+.+|.+++.++.. . .+..++...+.+. +++.
T Consensus 65 IVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er--~~~l~a~GAevi~t~~~~g~~~~a~~~a~el~~~~p~~~~~~ 142 (300)
T COG0031 65 IVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQER--RKLLRALGAEVILTPGAPGNMKGAIERAKELAAEIPGYAVWL 142 (300)
T ss_pred EEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHH--HHHHHHcCCEEEEcCCCCCchHHHHHHHHHHHHhCCCceEch
Confidence 444577877775433333345555444444434333 47788999999999972 1 1222223344444 6766
Q ss_pred e---CCCCCCccc
Q 016612 146 E---SPTNPRQQI 155 (386)
Q Consensus 146 ~---~~~nptG~~ 155 (386)
+ ||.||-...
T Consensus 143 ~Qf~NpaN~~aH~ 155 (300)
T COG0031 143 NQFENPANPEAHY 155 (300)
T ss_pred hhcCCCccHHHHH
Confidence 4 555554433
No 477
>PLN02253 xanthoxin dehydrogenase
Probab=37.88 E-value=78 Score=27.89 Aligned_cols=75 Identities=12% Similarity=0.101 Sum_probs=41.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.+| .++..+.+.|..|++.+............+...........+..|.+++++.+. .+...+
T Consensus 19 k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id~l 98 (280)
T PLN02253 19 KVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLDIM 98 (280)
T ss_pred CEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCCEE
Confidence 356777777666 345557788888876543322221111122111234556667778888776664 255666
Q ss_pred EEe
Q 016612 144 WVE 146 (386)
Q Consensus 144 ~~~ 146 (386)
+-+
T Consensus 99 i~~ 101 (280)
T PLN02253 99 VNN 101 (280)
T ss_pred EEC
Confidence 544
No 478
>COG1737 RpiR Transcriptional regulators [Transcription]
Probab=37.84 E-value=2.5e+02 Score=25.02 Aligned_cols=54 Identities=24% Similarity=0.270 Sum_probs=34.3
Q ss_pred hCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEec
Q 016612 136 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHS 197 (386)
Q Consensus 136 ~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S 197 (386)
++++.-+|.++. +|....+-+.++.++++|+.+|.= +....+++..-+|+++..
T Consensus 175 ~~~~Dv~i~iS~----sG~t~e~i~~a~~ak~~ga~vIai----T~~~~spla~~Ad~~L~~ 228 (281)
T COG1737 175 LTPGDVVIAISF----SGYTREIVEAAELAKERGAKVIAI----TDSADSPLAKLADIVLLV 228 (281)
T ss_pred CCCCCEEEEEeC----CCCcHHHHHHHHHHHHCCCcEEEE----cCCCCCchhhhhceEEec
Confidence 334555666554 466678889999999999877752 222233555566766654
No 479
>PF00926 DHBP_synthase: 3,4-dihydroxy-2-butanone 4-phosphate synthase; InterPro: IPR000422 3,4-dihydroxy-2-butanone 4-phosphate synthase (4.1.99.12 from EC) (DHBP synthase) (RibB) catalyses the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate, the latter serving as the biosynthetic precursor for the xylene ring of riboflavin []. In Photobacterium leiognathi, the riboflavin synthesis genes ribB (DHBP synthase), ribE (riboflavin synthase), ribH (lumazone synthase) and ribA (GTP cyclohydrolase II) all reside in the lux operon []. RibB is sometimes found as a bifunctional enzyme with GTP cyclohydrolase II that catalyses the first committed step in the biosynthesis of riboflavin (IPR000926 from INTERPRO). No sequences with significant homology to DHBP synthase are found in the metazoa.; GO: 0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity, 0009231 riboflavin biosynthetic process; PDB: 1K4O_A 1K4L_A 1K4P_A 1K49_A 1K4I_A 1TKU_A 1TKS_B 2RIS_A 2RIU_A 3MIO_A ....
Probab=37.48 E-value=85 Score=26.33 Aligned_cols=42 Identities=19% Similarity=0.215 Sum_probs=29.3
Q ss_pred HHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.++..-++.+++.+-. |..|...+.+++.++|++|++.++.
T Consensus 145 La~lAGl~p~avi~eil-~~dG~~~~~~~~~~fA~~~~l~~vs 186 (194)
T PF00926_consen 145 LARLAGLSPVAVICEIL-DDDGDMARRDELEEFAKKHGLPIVS 186 (194)
T ss_dssp HHHHTTS-SBEEEEEBB-ETTSSBHCHHHHHHHHHHTT-EEEE
T ss_pred HHHHhCCCCcEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 33333334556665544 4589999999999999999999874
No 480
>PRK13397 3-deoxy-7-phosphoheptulonate synthase; Provisional
Probab=37.36 E-value=2.7e+02 Score=24.50 Aligned_cols=56 Identities=14% Similarity=0.190 Sum_probs=37.1
Q ss_pred CCHHHHHhhhC-----CCceEEEEe-C---CCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 127 CDLDEVASAIG-----PWTKLVWVE-S---PTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 127 ~d~~~l~~~~~-----~~~~~v~~~-~---~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
.+++++..++. -+.+++++. . -.+++-...++..|..+-+..+++||+|-+|+.|.
T Consensus 133 ~t~~e~~~A~e~i~~~Gn~~i~L~eRg~~~Y~~~~~n~~dl~ai~~lk~~~~lPVivd~SHs~G~ 197 (250)
T PRK13397 133 ATIEEYLGALSYLQDTGKSNIILCERGVRGYDVETRNMLDIMAVPIIQQKTDLPIIVDVSHSTGR 197 (250)
T ss_pred CCHHHHHHHHHHHHHcCCCeEEEEccccCCCCCccccccCHHHHHHHHHHhCCCeEECCCCCCcc
Confidence 46777665543 244566664 1 12233335688888888888899999999987664
No 481
>PRK06182 short chain dehydrogenase; Validated
Probab=37.29 E-value=2e+02 Score=25.16 Aligned_cols=73 Identities=11% Similarity=0.137 Sum_probs=42.3
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEEE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVW 144 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v~ 144 (386)
.+++++|+.++ .++..+++.|.+|+...-.-.. +.... ..++++...+..|.+++++.++ .+...++
T Consensus 5 ~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~----l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 5 VALVTGASSGIGKATARRLAAQGYTVYGAARRVDK----MEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 45666666555 4555577889888754322111 11222 2456777778778888776654 2566666
Q ss_pred EeCCCC
Q 016612 145 VESPTN 150 (386)
Q Consensus 145 ~~~~~n 150 (386)
.+....
T Consensus 80 ~~ag~~ 85 (273)
T PRK06182 80 NNAGYG 85 (273)
T ss_pred ECCCcC
Confidence 554333
No 482
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=37.29 E-value=2.4e+02 Score=23.32 Aligned_cols=104 Identities=18% Similarity=0.135 Sum_probs=51.1
Q ss_pred ceEEeCc-HHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 72 RALCFTS-GMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 72 ~~i~~~~-gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
..+++.+ |..+-..+..+.+.|..|.+..............+....+.++...+..+.+++.+.+. +..+|+...+
T Consensus 30 ~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~diVi~at~-- 106 (194)
T cd01078 30 TAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-GADVVFAAGA-- 106 (194)
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-cCCEEEECCC--
Confidence 4555543 55444444445566766665443322111111122223456666667678888877775 3455554333
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
.|...+ .+.+... ....+++|-++-...
T Consensus 107 -~g~~~~--~~~~~~~-~~~~vv~D~~~~~~~ 134 (194)
T cd01078 107 -AGVELL--EKLAWAP-KPLAVAADVNAVPPV 134 (194)
T ss_pred -CCceec--hhhhccc-CceeEEEEccCCCCC
Confidence 344321 1111111 125689998875443
No 483
>PRK06194 hypothetical protein; Provisional
Probab=36.26 E-value=2.3e+02 Score=24.88 Aligned_cols=76 Identities=17% Similarity=0.201 Sum_probs=41.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEE--EEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.++ .++..+++.|..|++.+-.-.........+ ...+.++ ...+..|.+++++.+. .+..
T Consensus 7 k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 7 KVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAEL-RAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHH-HhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 356777777666 455667888988876543221222111121 2224444 4455567777776654 2456
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 86 ~vi~~Ag 92 (287)
T PRK06194 86 LLFNNAG 92 (287)
T ss_pred EEEECCC
Confidence 6665543
No 484
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=36.21 E-value=1e+02 Score=26.81 Aligned_cols=73 Identities=12% Similarity=0.153 Sum_probs=38.7
Q ss_pred EEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEEEE
Q 016612 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVWV 145 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v~~ 145 (386)
+++++|+.++ .++..+.+.|.+|++..............+.....+.....+..|.+++++.++ .+..+++-
T Consensus 3 vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li~ 82 (259)
T PRK08340 3 VLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALVW 82 (259)
T ss_pred EEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 5566666666 355667888888876544322222121222211234445556667777776653 35666654
Q ss_pred e
Q 016612 146 E 146 (386)
Q Consensus 146 ~ 146 (386)
+
T Consensus 83 n 83 (259)
T PRK08340 83 N 83 (259)
T ss_pred C
Confidence 3
No 485
>COG0108 RibB 3,4-dihydroxy-2-butanone 4-phosphate synthase [Coenzyme metabolism]
Probab=35.60 E-value=84 Score=26.38 Aligned_cols=42 Identities=21% Similarity=0.259 Sum_probs=30.4
Q ss_pred HHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.++..-.+..|+.+ .-|+.|......++.++|++||+.++.
T Consensus 149 LarlAGl~Pa~VicE-i~~~dG~mar~~~~~~fa~~h~l~~it 190 (203)
T COG0108 149 LARLAGLKPAGVICE-IMNDDGTMARLPELEEFAKEHGLPVIT 190 (203)
T ss_pred HHHHcCCCCcEEEEE-EeCCCccccChHHHHHHHHHcCCcEEE
Confidence 444444345555544 445589999999999999999998874
No 486
>PRK06179 short chain dehydrogenase; Provisional
Probab=35.17 E-value=2.4e+02 Score=24.56 Aligned_cols=70 Identities=16% Similarity=0.208 Sum_probs=42.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+.+.|.+|++...... ......++++...+..|.++++++++ .+..++
T Consensus 5 ~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~l 77 (270)
T PRK06179 5 KVALVTGASSGIGRATAEKLARAGYRVFGTSRNPA-------RAAPIPGVELLELDVTDDASVQAAVDEVIARAGRIDVL 77 (270)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChh-------hccccCCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEE
Confidence 356677777666 455667788888875443221 11123456677777778888877765 245666
Q ss_pred EEeCC
Q 016612 144 WVESP 148 (386)
Q Consensus 144 ~~~~~ 148 (386)
+-+..
T Consensus 78 i~~ag 82 (270)
T PRK06179 78 VNNAG 82 (270)
T ss_pred EECCC
Confidence 65543
No 487
>cd03315 MLE_like Muconate lactonizing enzyme (MLE) like subgroup of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and residues that can function as general acid/base catalysts, a Lys-X-Lys motif and another conserved lysine. Despite these conserved residues, the members of the MLE subgroup, like muconate lactonizing enzyme, o-succinylbenzoate synthase (OSBS) and N-acylamino acid racemase (NAAAR), catalyze different reactions.
Probab=35.08 E-value=1.3e+02 Score=26.49 Aligned_cols=78 Identities=9% Similarity=0.073 Sum_probs=43.9
Q ss_pred EecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 97 VAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 97 lv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
.+.+|........+..+.+..++++..... .++.++.+.+. ....+|.+... ..|.+.+..++.++|+++|+.+..
T Consensus 159 ~iEeP~~~~d~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~~k~~--~~GGi~~~~~~~~~A~~~gi~~~~ 236 (265)
T cd03315 159 YVEQPLPADDLEGRAALARATDTPIMADESAFTPHDAFRELALGAADAVNIKTA--KTGGLTKAQRVLAVAEALGLPVMV 236 (265)
T ss_pred EEECCCCcccHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEecc--cccCHHHHHHHHHHHHHcCCcEEe
Confidence 455554433233333444444444443332 25666666664 33455544422 257778888889999998887776
Q ss_pred eC
Q 016612 175 DN 176 (386)
Q Consensus 175 D~ 176 (386)
-.
T Consensus 237 ~~ 238 (265)
T cd03315 237 GS 238 (265)
T ss_pred cC
Confidence 53
No 488
>cd01422 MGS Methylglyoxal synthase catalyzes the enolization of dihydroxyacetone phosphate (DHAP) to produce methylglyoxal. The first part of the catalytic mechanism is believed to be similar to TIM (triosephosphate isomerase) in that both enzymes utilize DHAP to form an ene-diolate phosphate intermediate. In MGS, the second catalytic step is characterized by the elimination of phosphate and collapse of the enediolate to form methylglyoxal instead of reprotonation to form the isomer glyceraldehyde 3-phosphate, as in TIM. This is the first reaction in the methylglyoxal bypass of the Embden-Myerhoff glycolytic pathway and is believed to provide physiological benefits under non-ideal growth conditions in bacteria.
Probab=34.91 E-value=2e+02 Score=21.68 Aligned_cols=57 Identities=14% Similarity=0.180 Sum_probs=32.5
Q ss_pred CCcEEEEeCC---CCHHHHHhhhC-CCceEEEEeCCC--CCCcccccHHHHHHHHHHcCCEEEE
Q 016612 117 TGVVVKRVNT---CDLDEVASAIG-PWTKLVWVESPT--NPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 117 ~g~~~~~v~~---~d~~~l~~~~~-~~~~~v~~~~~~--nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
.|+.+..+.. ..-.++.+.+. .+..+|+. .|+ ...+...+-..|.+.|-+++++++.
T Consensus 44 ~Gi~v~~vk~~~~~g~~~i~~~i~~g~i~~VIn-t~~~~~~~~~~~dg~~iRr~a~~~~Ip~~T 106 (115)
T cd01422 44 TGLTVNRMKSGPLGGDQQIGALIAEGEIDAVIF-FRDPLTAQPHEPDVKALLRLCDVYNIPLAT 106 (115)
T ss_pred hCCcEEEEecCCCCchhHHHHHHHcCceeEEEE-cCCCCCCCcccccHHHHHHHHHHcCCCEEE
Confidence 4555544421 12234555554 45555543 332 3333345788999999999998774
No 489
>PRK06559 nicotinate-nucleotide pyrophosphorylase; Provisional
Probab=34.89 E-value=76 Score=28.52 Aligned_cols=69 Identities=12% Similarity=0.191 Sum_probs=44.6
Q ss_pred CCEEEecCCC---CCcHHHHHhhhcccCC-cEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHH
Q 016612 93 GEEIVAGDDL---YGGTDRLLSRVTPKTG-VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH 166 (386)
Q Consensus 93 g~~Vlv~~~~---~~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~ 166 (386)
.|.|++-+.. +++....+.++.+... ...+.++..++++..++++.....|.+++.+. .++++.+++.+
T Consensus 167 sD~iLIkdNHi~~~g~i~~av~~~r~~~~~~~kIeVEv~tleea~~a~~agaDiImLDnmsp-----e~l~~av~~~~ 239 (290)
T PRK06559 167 SDAIMLKDNHIAAVGSVQKAIAQARAYAPFVKMVEVEVESLAAAEEAAAAGADIIMLDNMSL-----EQIEQAITLIA 239 (290)
T ss_pred cceEEEcHHHHHhhccHHHHHHHHHHhCCCCCeEEEECCCHHHHHHHHHcCCCEEEECCCCH-----HHHHHHHHHhc
Confidence 4677776653 3444444444444444 35577888899999999988889999877543 34555555544
No 490
>PRK08091 ribulose-phosphate 3-epimerase; Validated
Probab=34.70 E-value=2.8e+02 Score=23.95 Aligned_cols=83 Identities=12% Similarity=0.122 Sum_probs=46.2
Q ss_pred hcccCCc--E--EEEeCCCCHHHHHhhhCCCceEEEEe--CCCCCCcccc-c-----HHHHHHHHHHc--CCEEEEeCCC
Q 016612 113 VTPKTGV--V--VKRVNTCDLDEVASAIGPWTKLVWVE--SPTNPRQQIC-D-----IRKIAEMAHAH--GALLLVDNSI 178 (386)
Q Consensus 113 ~~~~~g~--~--~~~v~~~d~~~l~~~~~~~~~~v~~~--~~~nptG~~~-~-----l~~i~~la~~~--~~~li~D~a~ 178 (386)
..+..|. + +..-|.+.++.++..+.. ...|++. +|..- |..+ + ++++.++.+++ +..+-+|+.-
T Consensus 111 ~Ik~~g~~~kaGlalnP~Tp~~~i~~~l~~-vD~VLiMtV~PGfg-GQ~f~~~~l~KI~~lr~~~~~~~~~~~IeVDGGI 188 (228)
T PRK08091 111 WLAKQKTTVLIGLCLCPETPISLLEPYLDQ-IDLIQILTLDPRTG-TKAPSDLILDRVIQVENRLGNRRVEKLISIDGSM 188 (228)
T ss_pred HHHHCCCCceEEEEECCCCCHHHHHHHHhh-cCEEEEEEECCCCC-CccccHHHHHHHHHHHHHHHhcCCCceEEEECCC
Confidence 3445554 2 333455688888887763 4444443 55442 3332 2 44455555555 4678899875
Q ss_pred CCCCccCCCCCCccEEEec
Q 016612 179 MSPVLSRPLELGADIVMHS 197 (386)
Q Consensus 179 ~~~~~~~~~~~~~di~~~S 197 (386)
.........+.|+|+++.+
T Consensus 189 ~~~ti~~l~~aGaD~~V~G 207 (228)
T PRK08091 189 TLELASYLKQHQIDWVVSG 207 (228)
T ss_pred CHHHHHHHHHCCCCEEEEC
Confidence 5433333445689987753
No 491
>COG0352 ThiE Thiamine monophosphate synthase [Coenzyme metabolism]
Probab=34.50 E-value=78 Score=26.97 Aligned_cols=50 Identities=14% Similarity=0.199 Sum_probs=35.6
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCcccc-cHHHHHHHHHHcCCEEEEeCCC
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQQIC-DIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG~~~-~l~~i~~la~~~~~~li~D~a~ 178 (386)
.+.++++++....++-+=--+..+-... -.+++.++|+++++.+++++-.
T Consensus 24 ~~~ve~al~~Gv~~vQlR~K~~~~~~~~~~a~~~~~lc~~~~v~liINd~~ 74 (211)
T COG0352 24 LEWVEAALKGGVTAVQLREKDLSDEEYLALAEKLRALCQKYGVPLIINDRV 74 (211)
T ss_pred HHHHHHHHhCCCeEEEEecCCCChHHHHHHHHHHHHHHHHhCCeEEecCcH
Confidence 6788888887777776644433333322 3578999999999999988763
No 492
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=34.48 E-value=2.9e+02 Score=23.77 Aligned_cols=74 Identities=9% Similarity=-0.002 Sum_probs=39.1
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC---CcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT---GVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~---g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
.+++++|+.++ .++..+.+.|..|++.+............+.... .+.....+..|.+++.+.+. .+..
T Consensus 4 ~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~id 83 (259)
T PRK12384 4 VAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGRVD 83 (259)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46666666655 4555677788887765444332222222222222 24455556667777765554 2456
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
.++-+
T Consensus 84 ~vv~~ 88 (259)
T PRK12384 84 LLVYN 88 (259)
T ss_pred EEEEC
Confidence 66544
No 493
>cd04795 SIS SIS domain. SIS (Sugar ISomerase) domains are found in many phosphosugar isomerases and phosphosugar binding proteins. SIS domains are also found in proteins that regulate the expression of genes involved in synthesis of phosphosugars.
Probab=34.40 E-value=1.5e+02 Score=20.27 Aligned_cols=35 Identities=9% Similarity=0.102 Sum_probs=22.5
Q ss_pred hCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 136 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 136 ~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
++++.-+++++.. |.-.++.++.+.++++|+.+|.
T Consensus 45 ~~~~d~~i~iS~s----g~t~~~~~~~~~a~~~g~~ii~ 79 (87)
T cd04795 45 LRKGDVVIALSYS----GRTEELLAALEIAKELGIPVIA 79 (87)
T ss_pred CCCCCEEEEEECC----CCCHHHHHHHHHHHHcCCeEEE
Confidence 3455556665553 3345677888888888876653
No 494
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=34.21 E-value=2.6e+02 Score=23.87 Aligned_cols=75 Identities=13% Similarity=0.192 Sum_probs=39.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecC-CCCCcHHHHHhhhcccCCcEE--EEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~-~~~~~~~~~~~~~~~~~g~~~--~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.++ .++..+++.|..|++.. ..-....... ...+..+.++ ...+..|.+++.+.++ .++
T Consensus 7 ~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (247)
T PRK12935 7 KVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLV-NELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGKV 85 (247)
T ss_pred CEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHH-HHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 456777777666 34555777888887532 1111111111 1122333334 4455557777766654 246
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
+.++.+.
T Consensus 86 d~vi~~a 92 (247)
T PRK12935 86 DILVNNA 92 (247)
T ss_pred CEEEECC
Confidence 6766553
No 495
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=33.90 E-value=3.3e+02 Score=23.98 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=19.5
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCc--ccccHHHHHHHHHH
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQ--QICDIRKIAEMAHA 167 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG--~~~~l~~i~~la~~ 167 (386)
.++++.+..-...+|++.-|.-|.+ .+.+++++.+.+++
T Consensus 213 ~eKi~AA~~lgi~vivI~RP~~~~~~~~~~~~~el~~~l~~ 253 (256)
T TIGR00715 213 LEKVKAAEALGINVIRIARPQTIPGVAIFDDISQLNQFVAR 253 (256)
T ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCCccCCCHHHHHHHHHH
Confidence 3445544444556666665543332 23455555555544
No 496
>cd03316 MR_like Mandelate racemase (MR)-like subfamily of the enolase superfamily. Enzymes of this subgroup share three conserved carboxylate ligands for the essential divalent metal ion (usually Mg2+), two aspartates and a glutamate, and conserved catalytic residues, a Lys-X-Lys motif and a conserved histidine-aspartate dyad. Members of the MR subgroup are mandelate racemase, D-glucarate/L-idarate dehydratase (GlucD), D-altronate/D-mannonate dehydratase , D-galactonate dehydratase (GalD) , D-gluconate dehydratase (GlcD), and L-rhamnonate dehydratase (RhamD).
Probab=33.70 E-value=3.9e+02 Score=24.68 Aligned_cols=78 Identities=17% Similarity=0.133 Sum_probs=41.3
Q ss_pred EEecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCCC-ceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 96 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 96 Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
..+.+|........+..+.+..++.+...+. .+++++++.+..+ ..++-+. -...|.+.+..++.++|+++|+.+.
T Consensus 218 ~~iEqP~~~~~~~~~~~l~~~~~ipi~~dE~~~~~~~~~~~i~~~~~d~v~~k--~~~~GGi~~~~~i~~~a~~~g~~~~ 295 (357)
T cd03316 218 FWFEEPVPPDDLEGLARLRQATSVPIAAGENLYTRWEFRDLLEAGAVDIIQPD--VTKVGGITEAKKIAALAEAHGVRVA 295 (357)
T ss_pred CeEcCCCCccCHHHHHHHHHhCCCCEEeccccccHHHHHHHHHhCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEe
Confidence 3455565443222233334444444333332 2666666666532 3333322 2225777777888888888887766
Q ss_pred Ee
Q 016612 174 VD 175 (386)
Q Consensus 174 ~D 175 (386)
.-
T Consensus 296 ~~ 297 (357)
T cd03316 296 PH 297 (357)
T ss_pred cc
Confidence 54
No 497
>cd03319 L-Ala-DL-Glu_epimerase L-Ala-D/L-Glu epimerase catalyzes the epimerization of L-Ala-D/L-Glu and other dipeptides. The genomic context and the substrate specificity of characterized members of this family from E.coli and B.subtilis indicates a possible role in the metabolism of the murein peptide of peptidoglycan, of which L-Ala-D-Glu is a component. L-Ala-D/L-Glu epimerase is a member of the enolase-superfamily, which is characterized by the presence of an enolate anion intermediate which is generated by abstraction of the alpha-proton of the carboxylate substrate by an active site residue and is stabilized by coordination to the essential Mg2+ ion.
Probab=33.61 E-value=1.8e+02 Score=26.47 Aligned_cols=79 Identities=15% Similarity=0.155 Sum_probs=44.4
Q ss_pred EEecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 96 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 96 Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
..+.+|........+..+.+..++++..-.. .+.+++.+.+.. ....+.+.... .|.+.+..+++++|+++|+.++
T Consensus 206 ~~iEeP~~~~d~~~~~~L~~~~~ipIa~~E~~~~~~~~~~~~~~~~~d~v~~~~~~--~GGi~~~~~~~~~a~~~gi~~~ 283 (316)
T cd03319 206 ELIEQPVPAGDDDGLAYLRDKSPLPIMADESCFSAADAARLAGGGAYDGINIKLMK--TGGLTEALRIADLARAAGLKVM 283 (316)
T ss_pred CEEECCCCCCCHHHHHHHHhcCCCCEEEeCCCCCHHHHHHHHhcCCCCEEEEeccc--cCCHHHHHHHHHHHHHcCCCEE
Confidence 3455554432222233444444444433332 256666666653 34455444322 5778888899999999998777
Q ss_pred EeC
Q 016612 174 VDN 176 (386)
Q Consensus 174 ~D~ 176 (386)
.-.
T Consensus 284 ~~~ 286 (316)
T cd03319 284 VGC 286 (316)
T ss_pred EEC
Confidence 653
No 498
>COG0514 RecQ Superfamily II DNA helicase [DNA replication, recombination, and repair]
Probab=33.50 E-value=1.3e+02 Score=30.08 Aligned_cols=98 Identities=13% Similarity=0.114 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-CHHH---HHhhhC-CCceEEEEeCCCCCCc
Q 016612 79 GMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDE---VASAIG-PWTKLVWVESPTNPRQ 153 (386)
Q Consensus 79 gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~---l~~~~~-~~~~~v~~~~~~nptG 153 (386)
|-+..+-+-+++.+|-+++|++. -.=...- ...++..|+....+... +.++ +...+. ...++++++.-.-.+.
T Consensus 44 GKSlCyQiPAll~~G~TLVVSPL-iSLM~DQ-V~~l~~~Gi~A~~lnS~l~~~e~~~v~~~l~~g~~klLyisPErl~~~ 121 (590)
T COG0514 44 GKSLCYQIPALLLEGLTLVVSPL-ISLMKDQ-VDQLEAAGIRAAYLNSTLSREERQQVLNQLKSGQLKLLYISPERLMSP 121 (590)
T ss_pred CcchHhhhHHHhcCCCEEEECch-HHHHHHH-HHHHHHcCceeehhhcccCHHHHHHHHHHHhcCceeEEEECchhhcCh
Confidence 34777888888889966666533 2111111 14466788887777654 4333 333333 4578888763321111
Q ss_pred ccccHHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 154 QICDIRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 154 ~~~~l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
.+.+..+ +-.-.++++||+|....+
T Consensus 122 ---~f~~~L~--~~~i~l~vIDEAHCiSqW 146 (590)
T COG0514 122 ---RFLELLK--RLPISLVAIDEAHCISQW 146 (590)
T ss_pred ---HHHHHHH--hCCCceEEechHHHHhhc
Confidence 1222221 334678999999875443
No 499
>PF10087 DUF2325: Uncharacterized protein conserved in bacteria (DUF2325); InterPro: IPR016772 There is currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=33.46 E-value=1.8e+02 Score=20.91 Aligned_cols=62 Identities=18% Similarity=0.154 Sum_probs=39.1
Q ss_pred HhhhcccCCcEEEEe--C-CC--CHHHHHhhhCCCceEEEEe-CCCCCCcccccHHHHHHHHHHcCCEEEEeC
Q 016612 110 LSRVTPKTGVVVKRV--N-TC--DLDEVASAIGPWTKLVWVE-SPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 110 ~~~~~~~~g~~~~~v--~-~~--d~~~l~~~~~~~~~~v~~~-~~~nptG~~~~l~~i~~la~~~~~~li~D~ 176 (386)
+...++..|.+.... + -. ....+++.+. ++++|++. ...+ . .-...+.+.|+++|++++.=.
T Consensus 15 ~~~~~~~~G~~~~~hg~~~~~~~~~~~l~~~i~-~aD~VIv~t~~vs-H---~~~~~vk~~akk~~ip~~~~~ 82 (97)
T PF10087_consen 15 YKRILEKYGGKLIHHGRDGGDEKKASRLPSKIK-KADLVIVFTDYVS-H---NAMWKVKKAAKKYGIPIIYSR 82 (97)
T ss_pred HHHHHHHcCCEEEEEecCCCCccchhHHHHhcC-CCCEEEEEeCCcC-h---HHHHHHHHHHHHcCCcEEEEC
Confidence 357778899998888 2 12 2234777665 44555543 2222 1 135788899999999887643
No 500
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=33.37 E-value=4.5e+02 Score=25.36 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=52.5
Q ss_pred CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 71 ~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
..+.+++.|.+++.+...+.+.|..|.+.+..-..........++..|+.+..-.. .++.+ .+..+|+++ |.
T Consensus 15 ~~i~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~~~~~l~~~gi~~~~~~~-~~~~~-----~~~dlVV~S-pg- 86 (458)
T PRK01710 15 KKVAVVGIGVSNIPLIKFLVKLGAKVTAFDKKSEEELGEVSNELKELGVKLVLGEN-YLDKL-----DGFDVIFKT-PS- 86 (458)
T ss_pred CeEEEEcccHHHHHHHHHHHHCCCEEEEECCCCCccchHHHHHHHhCCCEEEeCCC-ChHHh-----ccCCEEEEC-CC-
Confidence 46888899998886665577889888887754321110000123456766643221 23333 235566654 32
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeC
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~ 176 (386)
...+ ..+...|++.|+.++.+-
T Consensus 87 ---i~~~-~p~~~~a~~~~i~i~s~~ 108 (458)
T PRK01710 87 ---MRID-SPELVKAKEEGAYITSEM 108 (458)
T ss_pred ---CCCC-chHHHHHHHcCCcEEech
Confidence 2222 345556778888887643
Done!