Query 016612
Match_columns 386
No_of_seqs 176 out of 2103
Neff 10.1
Searched_HMMs 29240
Date Mon Mar 25 16:30:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016612.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016612hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ndn_A O-succinylhomoserine su 100.0 4.6E-50 1.6E-54 378.1 37.1 379 4-382 22-414 (414)
2 3nmy_A Xometc, cystathionine g 100.0 1.7E-49 5.7E-54 372.6 37.1 376 7-382 18-397 (400)
3 3ri6_A O-acetylhomoserine sulf 100.0 3.2E-49 1.1E-53 373.2 32.6 374 8-382 26-430 (430)
4 1ibj_A CBL, cystathionine beta 100.0 1.4E-47 4.7E-52 365.7 39.3 381 6-386 84-464 (464)
5 3cog_A Cystathionine gamma-lya 100.0 2.2E-47 7.7E-52 359.3 38.7 377 8-384 18-398 (403)
6 1qgn_A Protein (cystathionine 100.0 1.4E-46 4.9E-51 356.0 39.9 376 7-383 54-444 (445)
7 3qhx_A Cystathionine gamma-syn 100.0 1.7E-46 5.8E-51 352.3 39.7 372 8-382 17-392 (392)
8 3acz_A Methionine gamma-lyase; 100.0 1.5E-45 5.2E-50 345.7 39.9 378 5-383 2-388 (389)
9 2fq6_A Cystathionine beta-lyas 100.0 2.4E-46 8.4E-51 352.3 33.1 372 8-384 25-414 (415)
10 1n8p_A Cystathionine gamma-lya 100.0 1.7E-44 5.7E-49 338.8 34.9 377 6-384 5-391 (393)
11 1e5e_A MGL, methionine gamma-l 100.0 6.7E-44 2.3E-48 336.0 38.2 375 8-383 7-394 (404)
12 1gc0_A Methionine gamma-lyase; 100.0 2.5E-43 8.5E-48 331.9 36.3 378 7-384 8-397 (398)
13 2rfv_A Methionine gamma-lyase; 100.0 3.3E-42 1.1E-46 324.3 36.6 380 5-385 5-397 (398)
14 2ctz_A O-acetyl-L-homoserine s 100.0 7.1E-42 2.4E-46 323.9 35.9 374 9-382 3-421 (421)
15 1cs1_A CGS, protein (cystathio 100.0 2E-41 6.8E-46 317.7 38.0 375 8-384 4-383 (386)
16 2cb1_A O-acetyl homoserine sul 100.0 3.5E-40 1.2E-44 311.7 39.2 373 9-383 3-411 (412)
17 1pff_A Methionine gamma-lyase; 100.0 7.7E-38 2.6E-42 287.2 31.5 325 59-384 2-330 (331)
18 3nra_A Aspartate aminotransfer 100.0 7.4E-30 2.5E-34 240.6 22.1 325 11-383 39-404 (407)
19 3tqx_A 2-amino-3-ketobutyrate 100.0 2.5E-29 8.7E-34 236.3 25.4 284 55-385 88-397 (399)
20 3dzz_A Putative pyridoxal 5'-p 100.0 7E-29 2.4E-33 232.6 24.6 296 46-384 57-389 (391)
21 3a2b_A Serine palmitoyltransfe 100.0 1.3E-28 4.4E-33 231.6 25.8 290 48-385 79-393 (398)
22 3kax_A Aminotransferase, class 100.0 2.6E-28 9E-33 228.1 27.6 322 11-381 24-382 (383)
23 3ffh_A Histidinol-phosphate am 100.0 1.2E-28 4.2E-33 228.8 25.0 274 56-380 68-362 (363)
24 3i16_A Aluminum resistance pro 100.0 1.2E-28 4.1E-33 231.5 24.6 256 56-326 74-359 (427)
25 1b5p_A Protein (aspartate amin 100.0 1.5E-28 5E-33 230.1 25.2 289 47-382 62-383 (385)
26 3hvy_A Cystathionine beta-lyas 100.0 4E-28 1.4E-32 227.9 28.1 255 56-325 75-358 (427)
27 1fc4_A 2-amino-3-ketobutyrate 100.0 1.3E-28 4.4E-33 231.7 24.9 285 54-385 89-398 (401)
28 2z61_A Probable aspartate amin 100.0 2.4E-28 8.2E-33 227.5 26.2 288 46-382 59-369 (370)
29 3jzl_A Putative cystathionine 100.0 5.8E-28 2E-32 226.1 28.5 255 56-325 60-341 (409)
30 3get_A Histidinol-phosphate am 100.0 8.1E-29 2.8E-33 230.2 22.6 311 11-382 30-365 (365)
31 4dq6_A Putative pyridoxal phos 100.0 1.3E-28 4.4E-33 230.9 23.9 291 46-381 62-390 (391)
32 3op7_A Aminotransferase class 100.0 1.3E-28 4.4E-33 229.7 23.3 291 45-384 55-371 (375)
33 1o4s_A Aspartate aminotransfer 100.0 4.2E-28 1.4E-32 227.4 25.9 288 47-383 72-388 (389)
34 2r2n_A Kynurenine/alpha-aminoa 100.0 7.9E-28 2.7E-32 228.1 27.7 297 47-383 72-423 (425)
35 3ly1_A Putative histidinol-pho 100.0 9.6E-28 3.3E-32 221.9 27.0 277 55-384 51-352 (354)
36 1gd9_A Aspartate aminotransfer 100.0 7.6E-29 2.6E-33 232.4 19.7 294 47-385 57-387 (389)
37 2x5d_A Probable aminotransfera 100.0 5.1E-28 1.8E-32 228.5 24.8 293 46-384 68-398 (412)
38 3kki_A CAI-1 autoinducer synth 100.0 1.8E-28 6.1E-33 231.4 21.1 324 11-384 59-404 (409)
39 1j32_A Aspartate aminotransfer 100.0 5.9E-28 2E-32 226.2 24.3 292 46-383 60-386 (388)
40 3euc_A Histidinol-phosphate am 100.0 3.5E-28 1.2E-32 226.1 22.5 277 55-382 67-366 (367)
41 1fg7_A Histidinol phosphate am 100.0 3.8E-27 1.3E-31 218.2 29.2 299 12-378 30-352 (356)
42 1lc5_A COBD, L-threonine-O-3-p 100.0 5.7E-28 2E-32 224.4 23.5 278 56-383 60-359 (364)
43 3ele_A Amino transferase; RER0 100.0 1.9E-27 6.5E-32 223.5 27.1 290 46-383 69-395 (398)
44 3fdb_A Beta C-S lyase, putativ 100.0 1E-28 3.5E-33 230.4 18.2 295 46-384 53-376 (377)
45 3ezs_A Aminotransferase ASPB; 100.0 4.4E-28 1.5E-32 226.1 22.5 319 12-383 24-374 (376)
46 2w8t_A SPT, serine palmitoyltr 100.0 7.4E-28 2.5E-32 228.4 24.4 326 11-384 64-415 (427)
47 2dou_A Probable N-succinyldiam 100.0 1.1E-28 3.9E-33 230.1 18.4 319 12-380 26-374 (376)
48 3aow_A Putative uncharacterize 100.0 1.5E-27 5.1E-32 227.4 26.0 295 47-383 112-444 (448)
49 1d2f_A MALY protein; aminotran 100.0 4.6E-28 1.6E-32 227.2 21.6 292 47-383 59-388 (390)
50 1bs0_A Protein (8-amino-7-oxon 100.0 1.7E-27 5.7E-32 222.8 25.2 281 55-383 84-382 (384)
51 3jtx_A Aminotransferase; NP_28 100.0 8E-28 2.7E-32 225.9 23.1 325 10-381 29-395 (396)
52 1c7n_A Cystalysin; transferase 100.0 3.8E-27 1.3E-31 221.5 27.8 292 47-383 62-392 (399)
53 3dyd_A Tyrosine aminotransfera 100.0 1E-27 3.5E-32 227.4 24.0 288 47-383 90-423 (427)
54 3h14_A Aminotransferase, class 100.0 2.4E-27 8.2E-32 222.4 25.7 293 46-384 61-382 (391)
55 3isl_A Purine catabolism prote 100.0 3.7E-28 1.3E-32 229.6 20.3 287 55-384 44-390 (416)
56 2dr1_A PH1308 protein, 386AA l 100.0 1.2E-27 3.9E-32 223.9 23.4 287 54-383 52-378 (386)
57 2o1b_A Aminotransferase, class 100.0 4.2E-28 1.4E-32 228.5 20.1 292 47-384 79-403 (404)
58 3zrp_A Serine-pyruvate aminotr 100.0 6.8E-28 2.3E-32 225.2 20.2 285 55-384 35-363 (384)
59 1yiz_A Kynurenine aminotransfe 100.0 3.2E-27 1.1E-31 224.2 24.9 298 46-383 70-428 (429)
60 4hvk_A Probable cysteine desul 100.0 1.9E-28 6.6E-33 228.6 16.0 298 55-383 43-372 (382)
61 3p1t_A Putative histidinol-pho 100.0 2.8E-27 9.4E-32 217.3 23.3 308 10-383 15-336 (337)
62 3ftb_A Histidinol-phosphate am 100.0 2.3E-26 8E-31 213.1 29.5 278 56-383 62-360 (361)
63 3l8a_A METC, putative aminotra 100.0 1.4E-28 4.8E-33 233.0 14.0 294 45-382 90-420 (421)
64 3b46_A Aminotransferase BNA3; 100.0 6.2E-27 2.1E-31 223.4 25.2 294 11-331 57-408 (447)
65 3fvs_A Kynurenine--oxoglutarat 100.0 6E-27 2.1E-31 221.8 24.9 297 47-383 61-421 (422)
66 1elu_A L-cysteine/L-cystine C- 100.0 3.9E-27 1.3E-31 220.6 23.3 286 55-384 59-388 (390)
67 1xi9_A Putative transaminase; 100.0 1E-27 3.6E-32 226.0 19.4 293 47-384 72-403 (406)
68 1v2d_A Glutamine aminotransfer 100.0 7.6E-27 2.6E-31 218.2 25.0 287 48-383 56-370 (381)
69 3nnk_A Ureidoglycine-glyoxylat 100.0 1.2E-27 4.2E-32 225.7 19.5 287 55-384 46-390 (411)
70 3lvm_A Cysteine desulfurase; s 100.0 3.1E-27 1.1E-31 223.8 22.1 299 55-383 68-398 (423)
71 2gb3_A Aspartate aminotransfer 100.0 1.4E-26 4.7E-31 218.5 26.3 296 46-383 72-401 (409)
72 1iay_A ACC synthase 2, 1-amino 100.0 6.2E-26 2.1E-30 215.3 30.6 293 47-384 77-427 (428)
73 2zc0_A Alanine glyoxylate tran 100.0 3.7E-27 1.3E-31 222.3 21.6 294 49-384 71-404 (407)
74 3tcm_A Alanine aminotransferas 100.0 2.2E-27 7.6E-32 229.2 20.1 296 45-383 126-493 (500)
75 2x5f_A Aspartate_tyrosine_phen 100.0 2.3E-26 7.9E-31 218.4 26.2 320 12-383 48-428 (430)
76 3hdo_A Histidinol-phosphate am 100.0 5E-27 1.7E-31 217.7 21.1 276 57-383 67-354 (360)
77 1kmj_A Selenocysteine lyase; p 100.0 5.7E-27 2E-31 220.6 21.4 293 55-383 67-404 (406)
78 3piu_A 1-aminocyclopropane-1-c 100.0 3E-26 1E-30 217.9 26.5 291 47-383 80-431 (435)
79 1t3i_A Probable cysteine desul 100.0 6.6E-27 2.3E-31 221.2 21.8 296 55-384 72-413 (420)
80 2z9v_A Aspartate aminotransfer 100.0 4.2E-27 1.4E-31 220.7 19.8 287 56-384 43-371 (392)
81 3vax_A Putative uncharacterize 100.0 2.2E-27 7.5E-32 223.2 17.9 299 55-383 63-399 (400)
82 1u08_A Hypothetical aminotrans 100.0 1.9E-26 6.4E-31 215.9 24.1 292 46-382 60-384 (386)
83 3ihj_A Alanine aminotransferas 100.0 4.1E-26 1.4E-30 220.1 26.9 295 46-383 122-492 (498)
84 3ppl_A Aspartate aminotransfer 100.0 6.1E-27 2.1E-31 222.2 20.8 296 46-383 71-419 (427)
85 3g0t_A Putative aminotransfera 99.9 1.6E-26 5.4E-31 220.0 23.5 298 47-383 76-436 (437)
86 3cai_A Possible aminotransfera 99.9 7.1E-27 2.4E-31 220.2 20.4 293 55-384 69-405 (406)
87 1vp4_A Aminotransferase, putat 99.9 1.1E-26 3.6E-31 220.4 21.6 297 47-383 79-417 (425)
88 2o0r_A RV0858C (N-succinyldiam 99.9 2.8E-26 9.6E-31 216.5 24.3 303 46-383 55-395 (411)
89 2e7j_A SEP-tRNA:Cys-tRNA synth 99.9 4.2E-27 1.4E-31 218.9 18.0 287 54-384 52-370 (371)
90 3e2y_A Kynurenine-oxoglutarate 99.9 3.5E-26 1.2E-30 215.7 24.0 252 10-271 22-320 (410)
91 1vjo_A Alanine--glyoxylate ami 99.9 1.4E-26 4.6E-31 217.3 20.7 282 55-381 67-392 (393)
92 2huf_A Alanine glyoxylate amin 99.9 1.1E-26 3.8E-31 217.9 20.1 286 55-383 52-382 (393)
93 3ei9_A LL-diaminopimelate amin 99.9 2.2E-26 7.5E-31 218.7 22.2 324 12-380 57-424 (432)
94 3fkd_A L-threonine-O-3-phospha 99.9 8.2E-27 2.8E-31 215.4 18.5 313 11-384 15-342 (350)
95 3kgw_A Alanine-glyoxylate amin 99.9 4.7E-27 1.6E-31 220.2 17.0 288 55-384 56-388 (393)
96 4eb5_A Probable cysteine desul 99.9 2.4E-26 8.1E-31 214.6 21.4 301 55-383 43-372 (382)
97 3cq5_A Histidinol-phosphate am 99.9 8.4E-26 2.9E-30 210.2 24.3 282 47-383 64-367 (369)
98 1bw0_A TAT, protein (tyrosine 99.9 1.7E-25 5.8E-30 211.5 26.6 291 47-383 69-412 (416)
99 1eg5_A Aminotransferase; PLP-d 99.9 2.1E-26 7.2E-31 215.1 20.0 301 56-384 45-376 (384)
100 1iug_A Putative aspartate amin 99.9 1.6E-26 5.6E-31 213.3 18.8 280 56-383 35-347 (352)
101 2ch1_A 3-hydroxykynurenine tra 99.9 9.3E-27 3.2E-31 218.6 17.3 286 56-383 52-382 (396)
102 3qgu_A LL-diaminopimelate amin 99.9 1.8E-26 6E-31 220.4 19.2 293 45-384 103-440 (449)
103 3frk_A QDTB; aminotransferase, 99.9 1.8E-26 6.1E-31 215.0 18.7 302 54-384 35-364 (373)
104 2zyj_A Alpha-aminodipate amino 99.9 5E-26 1.7E-30 213.8 21.8 285 57-383 76-392 (397)
105 3f9t_A TDC, L-tyrosine decarbo 99.9 1.5E-26 5.1E-31 216.9 17.9 274 55-382 69-396 (397)
106 2aeu_A Hypothetical protein MJ 99.9 3E-26 1E-30 213.4 19.1 287 56-383 59-370 (374)
107 3rq1_A Aminotransferase class 99.9 8.2E-26 2.8E-30 213.8 22.1 285 45-384 72-415 (418)
108 3f0h_A Aminotransferase; RER07 99.9 7.7E-26 2.6E-30 210.8 21.1 166 55-225 52-228 (376)
109 3nyt_A Aminotransferase WBPE; 99.9 3.5E-25 1.2E-29 205.9 25.2 301 54-383 34-359 (367)
110 2yrr_A Aminotransferase, class 99.9 2.1E-26 7.3E-31 212.5 16.9 283 56-383 34-352 (353)
111 2bkw_A Alanine-glyoxylate amin 99.9 1.4E-25 4.7E-30 209.7 22.5 284 56-384 39-384 (385)
112 2bwn_A 5-aminolevulinate synth 99.9 4.6E-25 1.6E-29 207.5 26.1 281 55-383 91-399 (401)
113 3uwc_A Nucleotide-sugar aminot 99.9 6.8E-26 2.3E-30 211.1 19.6 304 54-384 37-371 (374)
114 3t18_A Aminotransferase class 99.9 3.4E-25 1.2E-29 209.2 24.0 284 45-383 71-409 (413)
115 3ju7_A Putative PLP-dependent 99.9 6.6E-25 2.2E-29 204.4 25.2 303 55-383 36-370 (377)
116 1b9h_A AHBA synthase, protein 99.9 4.4E-25 1.5E-29 206.7 23.5 255 54-330 37-323 (388)
117 3ffr_A Phosphoserine aminotran 99.9 3.2E-25 1.1E-29 205.4 22.3 280 55-383 43-359 (362)
118 3d6k_A Putative aminotransfera 99.9 9.8E-26 3.3E-30 213.5 18.8 296 46-383 69-417 (422)
119 3nx3_A Acoat, acetylornithine 99.9 3.7E-26 1.3E-30 214.5 15.7 322 12-383 37-394 (395)
120 3ez1_A Aminotransferase MOCR f 99.9 2.9E-25 9.8E-30 210.4 21.9 295 47-383 63-414 (423)
121 7aat_A Aspartate aminotransfer 99.9 4.1E-25 1.4E-29 207.8 22.7 167 44-215 62-264 (401)
122 3g7q_A Valine-pyruvate aminotr 99.9 5.7E-25 1.9E-29 207.9 23.7 303 47-383 69-412 (417)
123 1m32_A 2-aminoethylphosphonate 99.9 1.2E-25 4.3E-30 208.4 18.7 285 55-384 37-365 (366)
124 3if2_A Aminotransferase; YP_26 99.9 8.7E-25 3E-29 208.4 24.3 306 47-383 77-439 (444)
125 3dr4_A Putative perosamine syn 99.9 2.8E-24 9.6E-29 201.4 26.9 305 54-384 55-389 (391)
126 3f6t_A Aspartate aminotransfer 99.9 3.9E-25 1.3E-29 214.8 21.7 165 51-220 136-332 (533)
127 3ruy_A Ornithine aminotransfer 99.9 4.1E-25 1.4E-29 207.2 20.0 278 54-381 77-391 (392)
128 1jg8_A L-ALLO-threonine aldola 99.9 2.2E-25 7.7E-30 205.4 17.5 281 54-383 37-345 (347)
129 4f4e_A Aromatic-amino-acid ami 99.9 1.6E-24 5.5E-29 205.0 23.7 172 45-221 84-291 (420)
130 3b1d_A Betac-S lyase; HET: PLP 99.9 6.5E-28 2.2E-32 226.3 0.0 297 46-382 61-391 (392)
131 2oga_A Transaminase; PLP-depen 99.9 1.3E-24 4.4E-29 204.3 22.5 302 55-384 63-396 (399)
132 3k7y_A Aspartate aminotransfer 99.9 7.8E-25 2.7E-29 205.2 20.5 173 44-222 63-272 (405)
133 3ht4_A Aluminum resistance pro 99.9 1.8E-24 6.1E-29 204.1 22.9 254 55-323 65-345 (431)
134 4eu1_A Mitochondrial aspartate 99.9 1E-23 3.6E-28 198.8 28.2 251 11-271 41-344 (409)
135 4adb_A Succinylornithine trans 99.9 2.1E-25 7.3E-30 210.1 16.6 320 12-383 40-399 (406)
136 3meb_A Aspartate aminotransfer 99.9 6.3E-24 2.2E-28 202.5 26.6 327 11-385 49-445 (448)
137 3e9k_A Kynureninase; kynurenin 99.9 3.5E-26 1.2E-30 219.3 11.0 294 55-384 111-461 (465)
138 2c81_A Glutamine-2-deoxy-scyll 99.9 5E-24 1.7E-28 201.5 25.2 257 49-330 34-342 (418)
139 3bwn_A AT1G70560, L-tryptophan 99.9 1.8E-25 6.2E-30 209.4 14.4 297 45-383 55-386 (391)
140 3asa_A LL-diaminopimelate amin 99.9 1.3E-24 4.6E-29 204.3 19.6 291 46-383 68-392 (400)
141 3mad_A Sphingosine-1-phosphate 99.9 1.6E-24 5.4E-29 210.3 20.1 277 56-383 140-468 (514)
142 3lws_A Aromatic amino acid bet 99.9 8E-25 2.8E-29 202.6 17.0 288 19-331 11-321 (357)
143 3fsl_A Aromatic-amino-acid ami 99.9 4E-24 1.4E-28 200.8 21.7 198 11-215 26-261 (397)
144 1mdo_A ARNB aminotransferase; 99.9 6.9E-24 2.3E-28 198.9 23.3 302 55-383 39-385 (393)
145 2eh6_A Acoat, acetylornithine 99.9 4.8E-24 1.7E-28 198.6 21.1 273 55-380 70-374 (375)
146 1uu1_A Histidinol-phosphate am 99.9 4.9E-24 1.7E-28 195.6 20.0 235 57-328 58-309 (335)
147 1qz9_A Kynureninase; kynurenin 99.9 1E-24 3.6E-29 206.0 15.6 283 55-384 71-402 (416)
148 2fnu_A Aminotransferase; prote 99.9 4.4E-23 1.5E-27 192.0 25.5 300 55-384 32-372 (375)
149 3mc6_A Sphingosine-1-phosphate 99.9 4.1E-24 1.4E-28 206.7 18.5 278 56-383 108-436 (497)
150 2dkj_A Serine hydroxymethyltra 99.9 7.4E-24 2.5E-28 199.5 19.3 283 60-383 74-387 (407)
151 3ke3_A Putative serine-pyruvat 99.9 1.7E-23 5.7E-28 195.3 21.2 288 55-384 35-376 (379)
152 2zy4_A L-aspartate beta-decarb 99.9 1.4E-23 4.6E-28 204.1 21.3 175 47-224 132-338 (546)
153 1ajs_A Aspartate aminotransfer 99.9 1.1E-23 3.7E-28 198.8 19.5 285 45-384 66-411 (412)
154 1yaa_A Aspartate aminotransfer 99.9 1.8E-23 6.1E-28 197.4 20.8 283 46-383 66-410 (412)
155 2pb2_A Acetylornithine/succiny 99.9 1.1E-23 3.7E-28 199.2 17.5 285 53-383 97-417 (420)
156 2ord_A Acoat, acetylornithine 99.9 1.1E-23 3.7E-28 197.8 17.1 279 54-383 81-396 (397)
157 3pj0_A LMO0305 protein; struct 99.9 2.8E-23 9.5E-28 192.3 19.2 255 55-331 48-323 (359)
158 3a9z_A Selenocysteine lyase; P 99.9 2.7E-23 9.4E-28 197.3 19.6 305 56-383 62-427 (432)
159 1vef_A Acetylornithine/acetyl- 99.9 6.7E-24 2.3E-28 199.1 15.1 275 54-381 86-394 (395)
160 3dxv_A Alpha-amino-epsilon-cap 99.9 3.2E-24 1.1E-28 204.2 13.0 319 12-384 44-425 (439)
161 2q7w_A Aspartate aminotransfer 99.9 7.8E-23 2.7E-27 191.8 21.6 199 46-249 62-300 (396)
162 3b8x_A WBDK, pyridoxamine 5-ph 99.9 4.1E-22 1.4E-26 186.6 26.0 301 54-382 33-390 (390)
163 1v72_A Aldolase; PLP-dependent 99.9 1E-21 3.5E-26 181.4 28.0 276 54-383 42-352 (356)
164 3bb8_A CDP-4-keto-6-deoxy-D-gl 99.9 2.7E-22 9.3E-27 190.7 24.6 161 55-223 62-240 (437)
165 1svv_A Threonine aldolase; str 99.9 6.2E-23 2.1E-27 189.7 19.3 309 11-383 13-357 (359)
166 2hox_A ALLIIN lyase 1; cystein 99.9 2.7E-24 9.3E-29 203.5 10.0 284 56-383 105-424 (427)
167 2po3_A 4-dehydrase; external a 99.9 4.6E-22 1.6E-26 188.4 25.2 164 55-228 52-225 (424)
168 2oat_A Ornithine aminotransfer 99.9 1.4E-22 4.8E-27 192.6 21.5 282 54-383 117-438 (439)
169 1z7d_A Ornithine aminotransfer 99.9 8E-23 2.7E-27 194.0 19.4 284 54-383 106-428 (433)
170 2dgk_A GAD-beta, GADB, glutama 99.9 2.5E-22 8.5E-27 191.8 21.8 287 56-382 82-432 (452)
171 3n0l_A Serine hydroxymethyltra 99.9 1.5E-21 5.2E-26 184.3 25.6 287 57-383 73-388 (417)
172 1rv3_A Serine hydroxymethyltra 99.9 3.5E-22 1.2E-26 191.9 20.9 283 56-383 91-430 (483)
173 2eo5_A 419AA long hypothetical 99.9 2.1E-22 7.2E-27 190.4 19.0 276 54-384 85-418 (419)
174 1o69_A Aminotransferase; struc 99.9 3.5E-21 1.2E-25 180.5 27.0 252 55-330 32-332 (394)
175 3hbx_A GAD 1, glutamate decarb 99.9 4.9E-22 1.7E-26 191.8 21.2 286 56-383 96-443 (502)
176 1sff_A 4-aminobutyrate aminotr 99.9 1.1E-22 3.6E-27 192.8 16.2 283 55-383 84-423 (426)
177 2c0r_A PSAT, phosphoserine ami 99.9 7.2E-23 2.5E-27 189.8 14.5 273 56-382 50-359 (362)
178 2ay1_A Aroat, aromatic amino a 99.9 2.5E-22 8.4E-27 188.4 17.7 165 46-215 62-257 (394)
179 2vi8_A Serine hydroxymethyltra 99.9 2.3E-22 7.8E-27 189.2 17.0 285 59-384 73-387 (405)
180 3ecd_A Serine hydroxymethyltra 99.9 2.5E-21 8.5E-26 183.2 24.2 288 56-383 78-396 (425)
181 3vp6_A Glutamate decarboxylase 99.9 1.3E-21 4.4E-26 189.2 21.6 222 45-272 123-409 (511)
182 3i4j_A Aminotransferase, class 99.9 9.6E-23 3.3E-27 193.4 12.8 329 12-384 30-428 (430)
183 2z67_A O-phosphoseryl-tRNA(SEC 99.9 1E-21 3.6E-26 187.5 19.9 210 56-271 134-369 (456)
184 3n5m_A Adenosylmethionine-8-am 99.9 3.2E-22 1.1E-26 191.1 16.3 326 12-383 50-451 (452)
185 3gbx_A Serine hydroxymethyltra 99.9 1.4E-21 4.9E-26 184.6 20.6 289 56-384 77-396 (420)
186 1w23_A Phosphoserine aminotran 99.9 9.7E-23 3.3E-27 188.7 12.0 273 56-383 49-359 (360)
187 2fyf_A PSAT, phosphoserine ami 99.9 3E-22 1E-26 188.1 15.5 280 56-383 79-397 (398)
188 1wyu_B Glycine dehydrogenase s 99.9 3E-22 1E-26 192.2 15.3 158 56-218 108-287 (474)
189 1s0a_A Adenosylmethionine-8-am 99.9 5.8E-22 2E-26 188.0 17.1 282 54-383 85-423 (429)
190 2x3l_A ORN/Lys/Arg decarboxyla 99.9 7.8E-22 2.7E-26 187.6 17.9 272 54-384 56-353 (446)
191 4h51_A Aspartate aminotransfer 99.9 3.3E-22 1.1E-26 187.5 13.5 201 13-220 46-284 (420)
192 1c4k_A Protein (ornithine deca 99.9 1.1E-20 3.7E-25 188.0 24.9 210 55-270 173-437 (730)
193 1js3_A DDC;, DOPA decarboxylas 99.9 4.5E-21 1.5E-25 184.8 20.7 282 56-383 114-473 (486)
194 3a8u_X Omega-amino acid--pyruv 99.9 2.3E-21 7.8E-26 185.0 17.4 283 54-384 92-447 (449)
195 2a7v_A Serine hydroxymethyltra 99.9 1E-20 3.5E-25 180.4 21.3 283 59-382 104-439 (490)
196 2qma_A Diaminobutyrate-pyruvat 99.9 4.2E-21 1.4E-25 185.4 18.3 284 56-383 141-495 (497)
197 3oks_A 4-aminobutyrate transam 99.9 1.6E-21 5.3E-26 186.1 14.0 322 13-383 63-450 (451)
198 1zod_A DGD, 2,2-dialkylglycine 99.9 1.6E-20 5.6E-25 178.2 20.8 288 54-383 84-431 (433)
199 2cy8_A D-phgat, D-phenylglycin 99.9 2.2E-21 7.4E-26 185.3 14.7 317 12-383 58-434 (453)
200 4ffc_A 4-aminobutyrate aminotr 99.9 1.3E-21 4.5E-26 186.6 13.1 322 13-383 66-448 (453)
201 3h7f_A Serine hydroxymethyltra 99.9 4.6E-20 1.6E-24 175.7 23.7 290 58-383 93-413 (447)
202 2ez2_A Beta-tyrosinase, tyrosi 99.9 5.6E-20 1.9E-24 175.7 24.4 165 54-227 74-281 (456)
203 3tfu_A Adenosylmethionine-8-am 99.9 5.2E-22 1.8E-26 189.4 10.2 323 12-384 76-453 (457)
204 4e1o_A HDC, histidine decarbox 99.9 1.7E-20 5.9E-25 180.1 20.1 292 45-383 106-477 (481)
205 3gju_A Putative aminotransfera 99.9 1.9E-20 6.4E-25 179.1 20.1 324 12-383 52-455 (460)
206 3dod_A Adenosylmethionine-8-am 99.9 1.4E-21 5E-26 186.2 12.0 319 12-383 45-442 (448)
207 3l44_A Glutamate-1-semialdehyd 99.9 3.7E-21 1.3E-25 182.7 14.7 281 54-383 94-429 (434)
208 2okj_A Glutamate decarboxylase 99.9 2.8E-20 9.7E-25 179.9 20.8 163 56-222 133-333 (504)
209 1wyu_A Glycine dehydrogenase ( 99.9 2.3E-20 7.8E-25 177.4 19.8 155 56-218 109-277 (438)
210 2jis_A Cysteine sulfinic acid 99.9 4.4E-20 1.5E-24 178.9 21.9 160 56-221 149-347 (515)
211 3e77_A Phosphoserine aminotran 99.8 1.1E-20 3.7E-25 174.2 15.7 278 56-384 59-375 (377)
212 2epj_A Glutamate-1-semialdehyd 99.8 1.5E-20 5.1E-25 178.6 16.6 284 54-383 95-430 (434)
213 3k40_A Aromatic-L-amino-acid d 99.8 2.3E-20 8E-25 178.8 17.3 282 56-383 114-470 (475)
214 3i5t_A Aminotransferase; pyrid 99.8 1.1E-20 3.8E-25 181.2 15.0 319 13-383 56-453 (476)
215 4a6r_A Omega transaminase; tra 99.8 1E-20 3.4E-25 181.0 14.7 283 54-383 93-448 (459)
216 3fq8_A Glutamate-1-semialdehyd 99.8 6.4E-21 2.2E-25 180.7 13.3 285 53-383 90-426 (427)
217 1ax4_A Tryptophanase; tryptoph 99.8 1.8E-19 6.3E-24 172.6 21.5 292 55-383 76-440 (467)
218 3k28_A Glutamate-1-semialdehyd 99.8 1.9E-20 6.6E-25 177.5 14.2 282 54-384 92-427 (429)
219 4e77_A Glutamate-1-semialdehyd 99.8 1.6E-20 5.4E-25 178.1 13.4 284 54-383 92-428 (429)
220 3hmu_A Aminotransferase, class 99.8 1E-20 3.5E-25 181.1 11.1 321 12-383 56-451 (472)
221 2vyc_A Biodegradative arginine 99.8 1.2E-19 4.3E-24 181.9 19.0 208 56-271 206-464 (755)
222 2cjg_A L-lysine-epsilon aminot 99.8 8.8E-20 3E-24 173.8 16.7 282 53-383 99-447 (449)
223 3qm2_A Phosphoserine aminotran 99.8 1E-19 3.5E-24 168.7 15.2 152 55-219 72-238 (386)
224 2e7u_A Glutamate-1-semialdehyd 99.8 8.7E-19 3E-23 165.8 19.7 257 54-330 91-398 (424)
225 2yky_A Beta-transaminase; tran 99.7 1.5E-21 5.3E-26 185.0 0.0 322 12-384 101-460 (465)
226 2oqx_A Tryptophanase; lyase, p 99.8 2.1E-18 7.3E-23 165.2 17.4 293 55-383 74-441 (467)
227 3m5u_A Phosphoserine aminotran 99.8 1.6E-18 5.3E-23 159.3 15.3 272 56-382 51-358 (361)
228 3n75_A LDC, lysine decarboxyla 99.8 1E-17 3.6E-22 165.2 19.0 207 56-271 196-442 (715)
229 1ohv_A 4-aminobutyrate aminotr 99.8 2E-17 6.9E-22 158.4 17.3 279 55-383 110-470 (472)
230 3hl2_A O-phosphoseryl-tRNA(SEC 99.7 6E-16 2.1E-20 142.4 18.0 201 62-271 124-355 (501)
231 3ou5_A Serine hydroxymethyltra 99.7 2.4E-14 8.1E-19 131.2 24.8 214 53-272 94-355 (490)
232 3bc8_A O-phosphoseryl-tRNA(SEC 99.6 3.5E-15 1.2E-19 139.1 14.0 210 56-271 99-337 (450)
233 4ao9_A Beta-phenylalanine amin 99.6 1.3E-14 4.3E-19 136.7 14.2 280 56-384 128-446 (454)
234 4atq_A 4-aminobutyrate transam 99.6 5.1E-14 1.7E-18 133.1 18.2 290 56-384 108-455 (456)
235 4e3q_A Pyruvate transaminase; 99.5 1.4E-13 4.9E-18 130.5 14.2 314 20-384 78-468 (473)
236 4a0g_A Adenosylmethionine-8-am 99.3 1.6E-11 5.6E-16 124.1 15.2 207 130-384 577-828 (831)
237 3ic5_A Putative saccharopine d 82.1 6.5 0.00022 28.2 7.8 90 72-173 7-97 (118)
238 3ruf_A WBGU; rossmann fold, UD 66.9 37 0.0013 29.7 10.1 98 72-170 26-143 (351)
239 1tks_A 3,4-dihydroxy-2-butanon 66.6 11 0.00038 30.5 5.6 43 132-174 152-194 (204)
240 4g81_D Putative hexonate dehyd 65.6 22 0.00075 30.1 7.8 88 67-155 4-102 (255)
241 3dhn_A NAD-dependent epimerase 65.1 32 0.0011 27.9 8.7 66 74-146 7-74 (227)
242 2jl1_A Triphenylmethane reduct 64.8 20 0.00069 30.4 7.7 91 74-170 3-99 (287)
243 1qyd_A Pinoresinol-lariciresin 63.1 43 0.0015 28.7 9.6 95 74-170 7-109 (313)
244 2zcu_A Uncharacterized oxidore 62.4 18 0.00061 30.7 6.8 91 74-170 2-96 (286)
245 2al1_A Enolase 1, 2-phospho-D- 59.6 20 0.00067 33.1 6.8 92 81-174 277-371 (436)
246 3qvo_A NMRA family protein; st 59.1 35 0.0012 28.0 7.9 90 72-169 24-116 (236)
247 3e48_A Putative nucleoside-dip 58.7 20 0.00067 30.6 6.5 91 74-170 3-98 (289)
248 3qtp_A Enolase 1; glycolysis, 57.6 25 0.00086 32.3 7.0 92 81-174 283-378 (441)
249 3l77_A Short-chain alcohol deh 57.5 23 0.0008 29.0 6.5 77 73-149 4-90 (235)
250 3v2g_A 3-oxoacyl-[acyl-carrier 57.2 40 0.0014 28.5 8.1 75 72-147 32-117 (271)
251 3dqp_A Oxidoreductase YLBE; al 56.1 73 0.0025 25.5 9.3 88 74-169 3-97 (219)
252 3llv_A Exopolyphosphatase-rela 55.0 25 0.00086 26.1 5.8 89 71-169 7-95 (141)
253 1pjq_A CYSG, siroheme synthase 53.0 34 0.0012 31.7 7.4 93 72-178 14-107 (457)
254 3i6i_A Putative leucoanthocyan 53.0 25 0.00085 30.9 6.3 98 73-174 12-116 (346)
255 3fwz_A Inner membrane protein 52.4 23 0.00079 26.4 5.2 73 72-149 9-81 (140)
256 1zk4_A R-specific alcohol dehy 52.0 56 0.0019 26.9 8.1 77 72-148 7-91 (251)
257 1xgk_A Nitrogen metabolite rep 51.5 63 0.0022 28.5 8.7 92 74-169 8-103 (352)
258 2akz_A Gamma enolase, neural; 50.8 29 0.001 32.0 6.5 92 81-174 274-368 (439)
259 4iin_A 3-ketoacyl-acyl carrier 49.9 48 0.0016 27.9 7.4 77 72-148 30-116 (271)
260 1iuk_A Hypothetical protein TT 49.5 35 0.0012 25.7 5.7 21 159-179 107-127 (140)
261 3rih_A Short chain dehydrogena 48.4 1.2E+02 0.004 25.9 9.7 77 72-148 42-128 (293)
262 4fc7_A Peroxisomal 2,4-dienoyl 48.3 47 0.0016 28.1 7.1 76 72-147 28-113 (277)
263 3osu_A 3-oxoacyl-[acyl-carrier 47.7 45 0.0015 27.6 6.8 76 72-147 5-90 (246)
264 2g1u_A Hypothetical protein TM 47.3 88 0.003 23.5 9.5 88 70-167 19-107 (155)
265 1y81_A Conserved hypothetical 47.1 86 0.003 23.3 7.7 38 134-178 88-125 (138)
266 2r6j_A Eugenol synthase 1; phe 47.0 57 0.0019 28.0 7.6 95 74-174 14-112 (318)
267 4dmm_A 3-oxoacyl-[acyl-carrier 46.9 58 0.002 27.4 7.4 77 72-148 29-115 (269)
268 3is3_A 17BETA-hydroxysteroid d 46.9 54 0.0018 27.5 7.3 75 72-146 19-103 (270)
269 2d59_A Hypothetical protein PH 46.6 90 0.0031 23.4 7.8 40 132-178 94-133 (144)
270 3mio_A DHBP synthase, 3,4-dihy 46.2 46 0.0016 27.0 6.0 43 132-174 151-194 (206)
271 3m2p_A UDP-N-acetylglucosamine 45.6 75 0.0026 27.1 8.2 87 74-170 5-101 (311)
272 4b79_A PA4098, probable short- 45.3 94 0.0032 25.9 8.2 68 72-144 12-83 (242)
273 3ged_A Short-chain dehydrogena 45.0 1.2E+02 0.004 25.3 8.9 80 72-155 3-91 (247)
274 3enk_A UDP-glucose 4-epimerase 44.9 46 0.0016 28.9 6.7 98 73-170 7-121 (341)
275 3gk3_A Acetoacetyl-COA reducta 43.8 90 0.0031 26.1 8.2 76 72-147 26-111 (269)
276 1kyq_A Met8P, siroheme biosynt 43.6 25 0.00084 30.1 4.4 32 72-103 15-46 (274)
277 1g57_A DHBP synthase, 3,4-dihy 43.4 48 0.0016 27.1 5.8 42 132-174 160-201 (217)
278 3dr5_A Putative O-methyltransf 43.1 1.3E+02 0.0045 24.3 10.9 120 55-182 39-169 (221)
279 3uj2_A Enolase 1; enzyme funct 42.8 78 0.0027 29.2 8.0 92 81-174 293-389 (449)
280 2orv_A Thymidine kinase; TP4A 42.8 43 0.0015 27.8 5.6 90 81-177 35-124 (234)
281 3i4f_A 3-oxoacyl-[acyl-carrier 42.7 69 0.0024 26.6 7.3 74 72-146 8-92 (264)
282 3sxp_A ADP-L-glycero-D-mannohe 42.6 1.2E+02 0.0042 26.5 9.3 101 73-173 12-134 (362)
283 2q1w_A Putative nucleotide sug 42.1 79 0.0027 27.4 7.8 95 73-170 23-129 (333)
284 3u5t_A 3-oxoacyl-[acyl-carrier 42.1 66 0.0022 27.0 7.0 75 72-147 28-113 (267)
285 3l4b_C TRKA K+ channel protien 41.9 60 0.002 26.2 6.5 73 73-149 3-75 (218)
286 1lss_A TRK system potassium up 41.6 68 0.0023 23.3 6.4 89 72-169 6-94 (140)
287 1y80_A Predicted cobalamin bin 41.6 86 0.0029 25.2 7.4 75 102-178 100-180 (210)
288 3v2h_A D-beta-hydroxybutyrate 41.5 80 0.0027 26.7 7.5 77 72-148 26-113 (281)
289 1snn_A DHBP synthase, 3,4-dihy 41.5 45 0.0015 27.5 5.4 42 132-174 171-212 (227)
290 1chr_A Chloromuconate cycloiso 41.2 1.1E+02 0.0039 27.2 8.7 82 94-177 215-298 (370)
291 3rwb_A TPLDH, pyridoxal 4-dehy 41.1 1E+02 0.0035 25.4 8.0 76 72-151 7-92 (247)
292 3tqp_A Enolase; energy metabol 41.0 38 0.0013 31.1 5.5 92 81-174 267-363 (428)
293 2yxb_A Coenzyme B12-dependent 40.6 87 0.003 24.1 6.9 66 102-169 30-97 (161)
294 1pq4_A Periplasmic binding pro 40.6 97 0.0033 26.6 7.9 69 92-174 189-265 (291)
295 4egf_A L-xylulose reductase; s 40.6 55 0.0019 27.4 6.3 77 72-148 21-107 (266)
296 2fym_A Enolase; RNA degradosom 40.4 1.5E+02 0.005 27.1 9.5 95 81-177 271-370 (431)
297 2pju_A Propionate catabolism o 40.3 1.2E+02 0.0042 24.8 8.1 94 72-177 65-162 (225)
298 3oid_A Enoyl-[acyl-carrier-pro 40.3 1E+02 0.0035 25.6 7.9 76 72-148 5-91 (258)
299 3h7a_A Short chain dehydrogena 40.2 1.2E+02 0.0041 25.1 8.3 76 72-148 8-92 (252)
300 3c85_A Putative glutathione-re 40.1 38 0.0013 26.5 4.9 88 72-169 41-130 (183)
301 2ioj_A Hypothetical protein AF 40.1 95 0.0032 23.0 6.9 48 121-174 55-103 (139)
302 3otr_A Enolase; structural gen 40.0 33 0.0011 31.6 4.8 93 81-175 285-382 (452)
303 3ghf_A Septum site-determining 39.4 58 0.002 23.8 5.3 54 116-173 14-78 (120)
304 1hdo_A Biliverdin IX beta redu 39.2 89 0.0031 24.4 7.2 68 73-146 5-74 (206)
305 3r1i_A Short-chain type dehydr 39.1 1.2E+02 0.0041 25.5 8.2 76 72-148 33-118 (276)
306 2z1n_A Dehydrogenase; reductas 38.6 1.2E+02 0.0042 25.0 8.2 76 72-147 8-93 (260)
307 1xg5_A ARPG836; short chain de 38.5 1.2E+02 0.0041 25.4 8.2 75 72-147 33-119 (279)
308 3gvc_A Oxidoreductase, probabl 38.5 1.2E+02 0.0041 25.6 8.1 75 72-148 30-112 (277)
309 3tla_A MCCF; serine protease, 38.4 64 0.0022 28.9 6.5 69 89-157 39-127 (371)
310 3pk0_A Short-chain dehydrogena 38.4 1.2E+02 0.0042 25.1 8.2 77 72-148 11-97 (262)
311 3gi1_A LBP, laminin-binding pr 38.3 61 0.0021 27.8 6.2 69 92-174 178-256 (286)
312 3efb_A Probable SOR-operon reg 38.1 1.1E+02 0.0038 25.8 7.8 49 57-108 13-73 (266)
313 3ijr_A Oxidoreductase, short c 38.1 30 0.001 29.7 4.2 75 72-146 48-132 (291)
314 3bzy_B ESCU; auto cleavage pro 38.1 20 0.00069 24.4 2.4 20 158-177 29-48 (83)
315 1qyc_A Phenylcoumaran benzylic 37.7 78 0.0027 26.9 7.0 95 74-173 7-109 (308)
316 4ibo_A Gluconate dehydrogenase 37.7 89 0.003 26.3 7.2 76 72-148 27-112 (271)
317 3ksu_A 3-oxoacyl-acyl carrier 37.4 1.4E+02 0.0049 24.7 8.4 76 72-147 12-99 (262)
318 1xx6_A Thymidine kinase; NESG, 37.2 54 0.0019 26.1 5.3 90 81-174 24-113 (191)
319 1uls_A Putative 3-oxoacyl-acyl 37.2 81 0.0028 25.9 6.7 72 72-147 6-85 (245)
320 4gqr_A Pancreatic alpha-amylas 37.2 19 0.00064 33.5 2.9 82 91-178 7-99 (496)
321 3imf_A Short chain dehydrogena 37.1 1.3E+02 0.0044 24.9 8.0 75 72-147 7-91 (257)
322 3sju_A Keto reductase; short-c 36.9 1.4E+02 0.0049 25.0 8.4 76 72-148 25-110 (279)
323 4fgs_A Probable dehydrogenase 36.7 1.2E+02 0.0041 25.7 7.7 80 72-155 30-119 (273)
324 3guy_A Short-chain dehydrogena 36.5 1E+02 0.0035 24.9 7.2 71 73-147 3-80 (230)
325 3ezl_A Acetoacetyl-COA reducta 36.5 1E+02 0.0034 25.4 7.3 76 71-147 13-99 (256)
326 3dii_A Short-chain dehydrogena 36.4 1E+02 0.0035 25.4 7.2 73 72-148 3-84 (247)
327 3r6d_A NAD-dependent epimerase 36.1 51 0.0017 26.5 5.2 88 74-169 8-99 (221)
328 3o38_A Short chain dehydrogena 36.1 94 0.0032 25.8 7.1 77 72-148 23-110 (266)
329 4e6p_A Probable sorbitol dehyd 36.0 1.1E+02 0.0037 25.4 7.4 75 72-148 9-91 (259)
330 3l6e_A Oxidoreductase, short-c 36.0 1.1E+02 0.0038 24.9 7.4 75 73-149 5-87 (235)
331 3qlj_A Short chain dehydrogena 36.0 1.5E+02 0.005 25.6 8.5 74 72-146 28-121 (322)
332 3tfo_A Putative 3-oxoacyl-(acy 36.0 1.2E+02 0.0042 25.3 7.7 78 72-150 5-92 (264)
333 3gdg_A Probable NADP-dependent 35.9 93 0.0032 25.8 7.0 76 72-147 21-109 (267)
334 2pzm_A Putative nucleotide sug 35.9 1.2E+02 0.0041 26.1 7.9 95 73-170 22-128 (330)
335 4e3z_A Putative oxidoreductase 35.8 54 0.0018 27.5 5.5 74 72-146 27-111 (272)
336 2b4q_A Rhamnolipids biosynthes 35.8 62 0.0021 27.3 5.9 75 72-147 30-113 (276)
337 2bgk_A Rhizome secoisolaricire 35.4 45 0.0015 28.0 4.9 75 72-146 17-99 (278)
338 2o1e_A YCDH; alpha-beta protei 35.4 72 0.0025 27.7 6.3 68 92-173 189-266 (312)
339 4egb_A DTDP-glucose 4,6-dehydr 35.3 48 0.0017 28.9 5.3 98 73-170 26-141 (346)
340 3edm_A Short chain dehydrogena 35.2 1.3E+02 0.0045 24.9 7.8 74 72-146 9-93 (259)
341 4iiu_A 3-oxoacyl-[acyl-carrier 35.2 1E+02 0.0035 25.7 7.1 76 72-147 27-112 (267)
342 3qn3_A Enolase; structural gen 35.1 41 0.0014 30.8 4.7 94 81-176 265-363 (417)
343 2ptz_A Enolase; lyase, glycoly 35.1 64 0.0022 29.6 6.1 86 88-175 283-373 (432)
344 4id9_A Short-chain dehydrogena 35.0 1.2E+02 0.004 26.3 7.8 86 73-170 21-118 (347)
345 3pgx_A Carveol dehydrogenase; 34.7 1.1E+02 0.0039 25.6 7.4 77 72-148 16-114 (280)
346 2c5a_A GDP-mannose-3', 5'-epim 34.5 1.3E+02 0.0045 26.5 8.1 68 73-146 31-100 (379)
347 3c1o_A Eugenol synthase; pheny 34.5 1.2E+02 0.0042 25.8 7.8 96 74-174 7-110 (321)
348 1m3s_A Hypothetical protein YC 34.4 1.6E+02 0.0055 22.8 8.7 34 137-174 78-111 (186)
349 4h1h_A LMO1638 protein; MCCF-l 34.3 55 0.0019 28.7 5.3 69 89-157 8-96 (327)
350 3dfz_A SIRC, precorrin-2 dehyd 34.1 1.2E+02 0.004 24.9 7.0 88 71-173 32-119 (223)
351 2q1s_A Putative nucleotide sug 34.0 1.1E+02 0.0038 26.9 7.6 71 73-147 34-107 (377)
352 3pxx_A Carveol dehydrogenase; 34.0 1.1E+02 0.0038 25.6 7.3 29 72-100 11-41 (287)
353 3nyw_A Putative oxidoreductase 34.0 59 0.002 27.0 5.3 76 72-147 8-95 (250)
354 3gem_A Short chain dehydrogena 34.0 41 0.0014 28.2 4.4 72 72-147 28-107 (260)
355 3rkr_A Short chain oxidoreduct 33.9 1.1E+02 0.0038 25.3 7.2 76 72-148 30-115 (262)
356 2gas_A Isoflavone reductase; N 33.5 1.4E+02 0.0047 25.2 7.9 96 74-174 5-109 (307)
357 3ak4_A NADH-dependent quinucli 33.4 1.3E+02 0.0044 24.9 7.5 74 72-147 13-94 (263)
358 1x1t_A D(-)-3-hydroxybutyrate 33.3 1.5E+02 0.0051 24.5 7.9 76 72-147 5-91 (260)
359 3p19_A BFPVVD8, putative blue 33.2 1.3E+02 0.0043 25.2 7.4 72 72-148 17-96 (266)
360 3m1a_A Putative dehydrogenase; 32.8 1.2E+02 0.0042 25.3 7.3 73 72-146 6-86 (281)
361 2wm3_A NMRA-like family domain 32.8 56 0.0019 27.7 5.2 97 73-174 7-112 (299)
362 1sb8_A WBPP; epimerase, 4-epim 32.6 1.3E+02 0.0044 26.2 7.7 97 73-170 29-145 (352)
363 1gy8_A UDP-galactose 4-epimera 32.5 1.4E+02 0.0047 26.5 7.9 74 74-147 5-101 (397)
364 4dqx_A Probable oxidoreductase 32.2 1.5E+02 0.0051 24.9 7.7 74 72-149 28-111 (277)
365 2o23_A HADH2 protein; HSD17B10 32.1 1.2E+02 0.0041 25.0 7.1 74 72-147 13-94 (265)
366 3sr3_A Microcin immunity prote 32.1 77 0.0026 27.9 5.9 69 89-157 9-97 (336)
367 3ppi_A 3-hydroxyacyl-COA dehyd 32.0 1.2E+02 0.0043 25.3 7.2 73 72-146 31-110 (281)
368 3lf2_A Short chain oxidoreduct 32.0 1.3E+02 0.0044 25.0 7.3 77 72-148 9-96 (265)
369 4hp8_A 2-deoxy-D-gluconate 3-d 32.0 87 0.003 26.2 5.9 74 68-144 5-84 (247)
370 1yxm_A Pecra, peroxisomal tran 31.9 1.3E+02 0.0044 25.5 7.4 76 72-147 19-108 (303)
371 2vt1_B Surface presentation of 31.9 29 0.00098 24.2 2.4 21 158-178 29-49 (93)
372 1g94_A Alpha-amylase; beta-alp 31.9 25 0.00084 32.5 2.8 29 150-178 59-87 (448)
373 2hmt_A YUAA protein; RCK, KTN, 31.8 88 0.003 22.7 5.6 90 71-169 7-96 (144)
374 4da9_A Short-chain dehydrogena 31.6 49 0.0017 28.1 4.5 75 72-147 30-115 (280)
375 3afn_B Carbonyl reductase; alp 31.5 1.5E+02 0.0051 24.2 7.6 75 72-147 8-93 (258)
376 1sjd_A N-acylamino acid racema 31.4 1.1E+02 0.0036 27.3 6.9 47 128-176 244-291 (368)
377 2x4g_A Nucleoside-diphosphate- 31.4 1.8E+02 0.0061 25.0 8.4 92 73-170 15-118 (342)
378 2uvd_A 3-oxoacyl-(acyl-carrier 31.3 1.2E+02 0.004 24.9 6.8 75 72-147 5-90 (246)
379 1vl8_A Gluconate 5-dehydrogena 31.3 84 0.0029 26.3 5.9 76 72-147 22-107 (267)
380 3svt_A Short-chain type dehydr 31.2 1.6E+02 0.0055 24.6 7.8 74 72-146 12-98 (281)
381 4e5s_A MCCFLIKE protein (BA_56 31.2 71 0.0024 28.1 5.5 68 89-156 8-95 (331)
382 2cfc_A 2-(R)-hydroxypropyl-COM 31.1 60 0.0021 26.6 4.9 75 73-147 4-88 (250)
383 3t7y_A YOP proteins translocat 31.0 28 0.00095 24.5 2.2 20 158-177 44-63 (97)
384 1h5q_A NADP-dependent mannitol 30.9 1.3E+02 0.0045 24.7 7.1 75 72-146 15-99 (265)
385 3tzq_B Short-chain type dehydr 30.8 91 0.0031 26.1 6.1 73 72-146 12-92 (271)
386 3vnd_A TSA, tryptophan synthas 30.8 62 0.0021 27.5 4.9 6 211-216 231-236 (267)
387 3tsc_A Putative oxidoreductase 30.7 1.3E+02 0.0043 25.3 7.0 76 72-147 12-109 (277)
388 3tjr_A Short chain dehydrogena 30.6 1.4E+02 0.0047 25.5 7.3 76 72-148 32-117 (301)
389 2ehd_A Oxidoreductase, oxidore 30.6 1.8E+02 0.0063 23.3 7.9 72 72-147 6-86 (234)
390 3jva_A Dipeptide epimerase; en 30.5 1.9E+02 0.0066 25.4 8.4 87 90-178 206-294 (354)
391 2duw_A Putative COA-binding pr 30.5 90 0.0031 23.4 5.4 41 132-179 87-127 (145)
392 3f9i_A 3-oxoacyl-[acyl-carrier 30.4 97 0.0033 25.4 6.1 73 72-146 15-91 (249)
393 2pa6_A Enolase; glycolysis, ly 30.4 52 0.0018 30.2 4.7 92 81-174 271-365 (427)
394 1jeo_A MJ1247, hypothetical pr 30.3 1.8E+02 0.0063 22.2 8.1 82 59-173 29-113 (180)
395 3lyl_A 3-oxoacyl-(acyl-carrier 30.2 1.9E+02 0.0066 23.4 8.0 76 72-148 6-91 (247)
396 3rjz_A N-type ATP pyrophosphat 30.1 1.2E+02 0.0042 25.1 6.5 94 73-173 8-120 (237)
397 3r3h_A O-methyltransferase, SA 30.1 2.1E+02 0.0073 23.4 8.2 122 55-182 46-176 (242)
398 3kts_A Glycerol uptake operon 30.0 84 0.0029 25.1 5.2 43 127-174 17-59 (192)
399 3hvm_A Agmatine deiminase; hyd 30.0 33 0.0011 30.2 3.0 51 56-106 169-228 (330)
400 3slg_A PBGP3 protein; structur 29.9 73 0.0025 28.1 5.6 96 73-173 26-137 (372)
401 3ioy_A Short-chain dehydrogena 29.8 1.2E+02 0.0042 26.1 6.9 76 72-147 9-95 (319)
402 1w6t_A Enolase; bacterial infe 29.8 56 0.0019 30.1 4.8 94 81-176 283-381 (444)
403 1g0o_A Trihydroxynaphthalene r 29.8 1.4E+02 0.0048 25.1 7.2 76 72-147 30-115 (283)
404 3c01_E Surface presentation of 29.7 30 0.001 24.3 2.2 21 158-178 29-49 (98)
405 3sho_A Transcriptional regulat 29.7 1.4E+02 0.0048 23.1 6.7 35 136-174 85-119 (187)
406 3op4_A 3-oxoacyl-[acyl-carrier 29.7 2.1E+02 0.0073 23.3 8.2 74 72-147 10-91 (248)
407 2q2v_A Beta-D-hydroxybutyrate 29.7 2.1E+02 0.0072 23.4 8.2 73 72-147 5-87 (255)
408 3un1_A Probable oxidoreductase 29.6 1.6E+02 0.0054 24.5 7.4 69 72-148 29-105 (260)
409 3u9l_A 3-oxoacyl-[acyl-carrier 29.6 1.5E+02 0.005 25.8 7.3 77 72-148 6-96 (324)
410 3rd5_A Mypaa.01249.C; ssgcid, 29.6 54 0.0019 27.9 4.5 71 72-146 17-93 (291)
411 3t4x_A Oxidoreductase, short c 29.5 1.6E+02 0.0054 24.5 7.4 76 72-147 11-93 (267)
412 3r3s_A Oxidoreductase; structu 29.4 68 0.0023 27.4 5.1 76 72-147 50-136 (294)
413 3awd_A GOX2181, putative polyo 29.2 1.6E+02 0.0055 24.1 7.4 75 72-147 14-98 (260)
414 2poz_A Putative dehydratase; o 29.2 1.8E+02 0.0063 26.0 8.1 111 62-175 190-307 (392)
415 2oz8_A MLL7089 protein; struct 29.1 1E+02 0.0034 27.7 6.3 74 96-175 221-296 (389)
416 3ecs_A Translation initiation 29.0 2.9E+02 0.0098 24.0 11.3 97 72-174 123-228 (315)
417 1rpn_A GDP-mannose 4,6-dehydra 28.9 1.3E+02 0.0046 25.7 7.1 75 72-146 15-93 (335)
418 2pnf_A 3-oxoacyl-[acyl-carrier 28.9 1.6E+02 0.0054 23.9 7.2 76 72-147 8-93 (248)
419 3grp_A 3-oxoacyl-(acyl carrier 28.7 1.2E+02 0.0043 25.2 6.6 72 72-147 28-109 (266)
420 2gl5_A Putative dehydratase pr 28.5 1.5E+02 0.0053 26.7 7.5 110 62-174 209-325 (410)
421 3dip_A Enolase; structural gen 28.4 2.1E+02 0.007 25.9 8.3 82 94-177 240-324 (410)
422 3bh4_A Alpha-amylase; calcium, 28.3 37 0.0013 31.6 3.3 28 151-178 74-101 (483)
423 3tj4_A Mandelate racemase; eno 28.1 2.6E+02 0.0088 24.8 8.8 83 90-174 220-304 (372)
424 2c20_A UDP-glucose 4-epimerase 28.1 1.3E+02 0.0045 25.7 6.8 92 74-170 4-110 (330)
425 3tpc_A Short chain alcohol deh 28.0 2.2E+02 0.0074 23.4 8.0 72 72-147 8-89 (257)
426 3uf0_A Short-chain dehydrogena 27.9 2.6E+02 0.009 23.2 8.9 74 72-147 32-114 (273)
427 2hq1_A Glucose/ribitol dehydro 27.8 69 0.0023 26.2 4.7 74 72-146 6-90 (247)
428 3s55_A Putative short-chain de 27.8 1.5E+02 0.005 24.9 6.9 76 72-147 11-107 (281)
429 2p5y_A UDP-glucose 4-epimerase 27.8 1.9E+02 0.0064 24.5 7.8 68 74-146 3-73 (311)
430 1mxg_A Alpha amylase; hyperthe 27.8 38 0.0013 31.1 3.3 28 151-178 82-109 (435)
431 3e03_A Short chain dehydrogena 27.6 2.1E+02 0.0073 23.8 7.9 75 72-147 7-98 (274)
432 3icc_A Putative 3-oxoacyl-(acy 27.5 2E+02 0.0069 23.4 7.7 64 72-136 8-76 (255)
433 1ud2_A Amylase, alpha-amylase; 27.5 38 0.0013 31.5 3.3 27 152-178 77-103 (480)
434 1ja9_A 4HNR, 1,3,6,8-tetrahydr 27.5 1.3E+02 0.0045 24.9 6.5 74 72-146 22-106 (274)
435 3sc4_A Short chain dehydrogena 27.4 2.1E+02 0.0072 24.0 7.9 77 72-149 10-103 (285)
436 1k4i_A 3,4-dihydroxy-2-butanon 27.4 99 0.0034 25.5 5.2 42 132-174 160-212 (233)
437 3ko8_A NAD-dependent epimerase 27.3 2.2E+02 0.0075 23.9 8.1 65 74-146 3-69 (312)
438 1fmc_A 7 alpha-hydroxysteroid 27.3 1.2E+02 0.0042 24.7 6.3 76 72-147 12-96 (255)
439 1hvx_A Alpha-amylase; hydrolas 27.2 39 0.0013 31.9 3.3 27 152-178 78-104 (515)
440 1edo_A Beta-keto acyl carrier 27.2 1.4E+02 0.0048 24.2 6.6 74 73-147 3-87 (244)
441 3q45_A Mandelate racemase/muco 27.2 1.5E+02 0.0053 26.3 7.1 64 112-177 229-294 (368)
442 3nzo_A UDP-N-acetylglucosamine 27.2 2.2E+02 0.0074 25.5 8.3 98 73-170 37-157 (399)
443 1wpc_A Glucan 1,4-alpha-maltoh 27.1 39 0.0013 31.5 3.3 27 152-178 79-105 (485)
444 3rft_A Uronate dehydrogenase; 27.1 2.1E+02 0.007 23.7 7.7 65 73-146 5-71 (267)
445 3o26_A Salutaridine reductase; 27.0 58 0.002 27.7 4.2 75 72-146 13-98 (311)
446 1gee_A Glucose 1-dehydrogenase 27.0 1.7E+02 0.0059 23.9 7.2 75 72-147 8-93 (261)
447 3tsm_A IGPS, indole-3-glycerol 27.0 2.3E+02 0.0078 24.0 7.7 78 96-176 98-176 (272)
448 1nff_A Putative oxidoreductase 26.9 2E+02 0.0068 23.7 7.5 74 72-147 8-89 (260)
449 2ya0_A Putative alkaline amylo 26.8 31 0.0011 34.2 2.6 29 151-179 250-278 (714)
450 3d3w_A L-xylulose reductase; u 26.6 2.5E+02 0.0086 22.6 8.9 71 72-146 8-83 (244)
451 4ina_A Saccharopine dehydrogen 26.6 2.1E+02 0.0071 25.8 8.0 94 73-172 4-103 (405)
452 1yb1_A 17-beta-hydroxysteroid 26.6 1.2E+02 0.004 25.4 6.0 76 72-148 32-117 (272)
453 1lwj_A 4-alpha-glucanotransfer 26.4 33 0.0011 31.5 2.6 27 152-178 66-92 (441)
454 3qiv_A Short-chain dehydrogena 26.3 57 0.002 26.9 3.9 74 72-146 10-93 (253)
455 2ae2_A Protein (tropinone redu 26.3 2.1E+02 0.007 23.6 7.5 75 72-147 10-95 (260)
456 3m9w_A D-xylose-binding peripl 26.3 1.1E+02 0.0038 25.9 6.0 69 101-174 15-88 (313)
457 4eso_A Putative oxidoreductase 26.2 2.1E+02 0.0071 23.6 7.5 72 72-147 9-90 (255)
458 1hxh_A 3BETA/17BETA-hydroxyste 26.0 2.7E+02 0.0092 22.7 8.9 74 72-147 7-88 (253)
459 3i4k_A Muconate lactonizing en 26.0 2.2E+02 0.0074 25.4 7.9 60 116-177 243-304 (383)
460 2i2x_B MTAC, methyltransferase 25.8 1.3E+02 0.0046 25.1 6.1 74 102-177 135-212 (258)
461 3a28_C L-2.3-butanediol dehydr 25.7 2.1E+02 0.007 23.5 7.4 74 73-147 4-89 (258)
462 2d1y_A Hypothetical protein TT 25.7 2.7E+02 0.0094 22.7 8.3 71 72-147 7-85 (256)
463 1xkq_A Short-chain reductase f 25.7 2.1E+02 0.0072 23.9 7.5 76 72-147 7-94 (280)
464 3ftp_A 3-oxoacyl-[acyl-carrier 25.6 2.2E+02 0.0075 23.7 7.6 75 72-147 29-113 (270)
465 3kv1_A Transcriptional repress 25.6 2.2E+02 0.0077 23.9 7.6 48 58-108 10-68 (267)
466 1ht6_A AMY1, alpha-amylase iso 25.5 36 0.0012 30.9 2.6 28 152-179 65-92 (405)
467 1wza_A Alpha-amylase A; hydrol 25.4 40 0.0014 31.5 3.0 27 152-178 78-104 (488)
468 3kvo_A Hydroxysteroid dehydrog 25.4 3.4E+02 0.012 23.7 9.1 75 72-147 46-137 (346)
469 1geg_A Acetoin reductase; SDR 25.3 2.1E+02 0.0071 23.5 7.3 74 73-147 4-87 (256)
470 1cyd_A Carbonyl reductase; sho 25.3 2.6E+02 0.0091 22.4 8.9 72 72-147 8-84 (244)
471 1x92_A APC5045, phosphoheptose 25.3 2.4E+02 0.0083 22.0 10.3 40 131-174 106-145 (199)
472 1spx_A Short-chain reductase f 25.3 2.3E+02 0.0078 23.5 7.7 75 72-146 7-93 (278)
473 2xhz_A KDSD, YRBH, arabinose 5 25.3 2.3E+02 0.0079 21.7 8.8 33 137-173 95-127 (183)
474 1gcy_A Glucan 1,4-alpha-maltot 25.2 44 0.0015 31.6 3.3 29 150-178 87-115 (527)
475 1ek6_A UDP-galactose 4-epimera 25.1 1.1E+02 0.0038 26.5 5.8 74 73-146 4-88 (348)
476 4fn4_A Short chain dehydrogena 25.0 44 0.0015 28.2 2.9 74 72-146 8-91 (254)
477 4aie_A Glucan 1,6-alpha-glucos 25.0 36 0.0012 32.2 2.6 26 153-178 77-102 (549)
478 3oec_A Carveol dehydrogenase ( 25.0 1.7E+02 0.0058 25.1 6.9 77 72-148 47-144 (317)
479 1r6d_A TDP-glucose-4,6-dehydra 24.9 2.1E+02 0.0073 24.4 7.6 96 74-170 3-119 (337)
480 4dyv_A Short-chain dehydrogena 24.9 1E+02 0.0034 26.0 5.3 74 72-147 29-110 (272)
481 1hdc_A 3-alpha, 20 beta-hydrox 24.9 1.9E+02 0.0067 23.7 7.1 72 72-147 6-87 (254)
482 3mwd_B ATP-citrate synthase; A 24.8 1.2E+02 0.0041 26.7 5.7 74 101-178 65-140 (334)
483 2dh2_A 4F2 cell-surface antige 24.8 42 0.0014 30.7 3.0 28 152-179 78-105 (424)
484 2e8y_A AMYX protein, pullulana 24.8 25 0.00086 34.8 1.5 25 155-179 315-339 (718)
485 3a11_A Translation initiation 24.8 1.6E+02 0.0055 25.9 6.6 98 72-175 143-249 (338)
486 3re1_A Uroporphyrinogen-III sy 24.6 42 0.0014 28.4 2.7 56 92-149 13-76 (269)
487 3e2i_A Thymidine kinase; Zn-bi 24.5 1E+02 0.0035 25.3 4.9 91 81-175 44-134 (219)
488 2jah_A Clavulanic acid dehydro 24.5 1.9E+02 0.0067 23.5 7.0 75 72-147 8-92 (247)
489 2gdq_A YITF; mandelate racemas 24.3 1.3E+02 0.0046 26.8 6.2 84 90-175 207-293 (382)
490 2dt5_A AT-rich DNA-binding pro 24.2 1.2E+02 0.0042 24.5 5.4 104 57-179 64-174 (211)
491 1iy8_A Levodione reductase; ox 24.2 80 0.0027 26.3 4.5 75 72-146 14-99 (267)
492 1jae_A Alpha-amylase; glycosid 24.1 35 0.0012 31.7 2.3 28 151-178 70-97 (471)
493 3mfq_A TROA, high-affinity zin 24.1 55 0.0019 28.0 3.4 70 94-174 164-243 (282)
494 2j9r_A Thymidine kinase; TK1, 24.0 1.1E+02 0.0038 24.9 5.0 90 81-174 44-133 (214)
495 2ag5_A DHRS6, dehydrogenase/re 24.0 2.9E+02 0.0099 22.4 8.3 72 72-147 7-82 (246)
496 3ezx_A MMCP 1, monomethylamine 23.8 1.5E+02 0.0051 24.1 5.8 74 102-177 104-185 (215)
497 3tox_A Short chain dehydrogena 23.8 1.1E+02 0.0037 25.9 5.3 74 72-146 9-92 (280)
498 1vhx_A Putative holliday junct 23.8 1.6E+02 0.0055 22.3 5.7 53 128-180 43-102 (150)
499 2yva_A DNAA initiator-associat 23.7 2.6E+02 0.0088 21.7 11.1 38 133-174 104-141 (196)
500 3ddm_A Putative mandelate race 23.7 2.4E+02 0.0083 25.2 7.8 77 96-174 228-307 (392)
No 1
>3ndn_A O-succinylhomoserine sulfhydrylase; seattle structural genomics center for infectious disease, S mycobacterium, PLP, schiff base; HET: LLP; 1.85A {Mycobacterium tuberculosis}
Probab=100.00 E-value=4.6e-50 Score=378.12 Aligned_cols=379 Identities=34% Similarity=0.544 Sum_probs=338.1
Q ss_pred CCCCCccceeeccCCCCCCCCCcccceeeeeeeecCCC--------CCCCCccccCCCCchHHHHHHHHHhhcCCCceEE
Q 016612 4 EEEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (386)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~ 75 (386)
+.+.++++++++.|..++.+|.+.+|+++++++..++. .....+.|++.++|.++++++.+++++|.++.++
T Consensus 22 ~~~~~~~t~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~~~ 101 (414)
T 3ndn_A 22 PDGVSQATVGVRGGMLRSGFEETAEAMYLTSGYVYGSAAVAEKSFAGELDHYVYSRYGNPTVSVFEERLRLIEGAPAAFA 101 (414)
T ss_dssp CTTCCHHHHHHHTTCCCCTTCBSSCCBCCCSBBCCSSHHHHHHHHTTSSCCCCBTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred cCCCCccceeeecCCCCCCCCCcCCCcccCCceecCChHHHHHHHhCCcCCcCcCCCCChHHHHHHHHHHHHHCCCcEEE
Confidence 45667889999999777889999999999999987654 2345677888888999999999999999999999
Q ss_pred eCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcc
Q 016612 76 FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 76 ~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~ 154 (386)
++||++|+. ++.+++++||+|++++|.|+++...+...++..|++++.++..|++++++++++++++|++++|+||+|.
T Consensus 102 ~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~ai~~~t~~v~le~p~NptG~ 181 (414)
T 3ndn_A 102 TASGMAAVFTSLGALLGAGDRLVAARSLFGSCFVVCSEILPRWGVQTVFVDGDDLSQWERALSVPTQAVFFETPSNPMQS 181 (414)
T ss_dssp ESSHHHHHHHHHHTTCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHTSSCCSEEEEESSCTTTCC
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEcCCccchHHHHHHHHHHHcCcEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCc
Confidence 999999987 5666899999999999999998876666667799999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCC
Q 016612 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (386)
Q Consensus 155 ~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~ 234 (386)
+.|+++|.++|+++|+++|+|++|+.+....+...++|+++.|+||++++++.+++|+++++++.+.+.+.......+..
T Consensus 182 ~~~l~~i~~la~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~~~G~~~~G~vv~~~~~~~~~l~~~~~~~g~~ 261 (414)
T 3ndn_A 182 LVDIAAVTELAHAAGAKVVLDNVFATPLLQQGFPLGVDVVVYSGTKHIDGQGRVLGGAILGDREYIDGPVQKLMRHTGPA 261 (414)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTHHHHCCCGGGTCSEEEEETTTTTTCSSCCCCEEEEECHHHHTTHHHHHHHHHCCC
T ss_pred cccHHHHHHHHHHcCCEEEEECCCcccccCCchhcCCCeEeccCCccccCCCCceEEEEEECHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999999999997776667778899999999999976554789999998655544555555556677
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-----H
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-----L 309 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-----~ 309 (386)
+++..+++++++++.+..+.++..++++.+.++|++++.+..+.++++++.+++.++.+..++.|++++|.+++ .
T Consensus 262 ~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~G~~l~~~l~~~~~~~~ 341 (414)
T 3ndn_A 262 MSAFNAWVLLKGLETLAIRVQHSNASAQRIAEFLNGHPSVRWVRYPYLPSHPQYDLAKRQMSGGGTVVTFALDCPEDVAK 341 (414)
T ss_dssp CCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEECSCGGGHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEeEEECCCCCCCcCHHHHHHhCCCCceEEEEEEcCCccccH
Confidence 78888888889999999999999999999999999999888899999999999999888888899999999954 5
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
+...++++.++..++.++.|+.++++++|+.+++..++++.+.+.|..+++||+|+|.|+++++++.|+++|+
T Consensus 342 ~~~~~~~~~l~~~~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvG~e~~~dli~dl~~al~ 414 (414)
T 3ndn_A 342 QRAFEVLDKMRLIDISNNLGDAKSLVTHPATTTHRAMGPEGRAAIGLGDGVVRISVGLEDTDDLIADIDRALS 414 (414)
T ss_dssp HHHHHHHHHCSSSEECSCCSCSSCEEECGGGTTTCTTHHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred HHHHHHHHhCccceEcCCCCCCCceeeCccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHhhC
Confidence 6788999999999999999999999999999999999999999999999999999999999999999999984
No 2
>3nmy_A Xometc, cystathionine gamma-lyase-like protein; Cys-Met metabolism PLP-dependent enzyme family, CYST gamma lyase, pyridoxal-phosphate; HET: PLP; 2.07A {Xanthomonas oryzae PV} SCOP: c.67.1.0 PDB: 3e6g_A* 3nnp_A*
Probab=100.00 E-value=1.7e-49 Score=372.64 Aligned_cols=376 Identities=43% Similarity=0.707 Sum_probs=341.6
Q ss_pred CCccceeeccCCCCC-CCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHH
Q 016612 7 PGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (386)
Q Consensus 7 ~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~ 85 (386)
.+++|++++.|..++ .+|.+++|+++++++..++......+.|++.++|.+.++++.++++.|.++.++++||++|+.+
T Consensus 18 ~~~~t~~~~~~~~~~~~~~~~~~pi~~~s~~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~l~g~~~~~~~~sG~~Ai~~ 97 (400)
T 3nmy_A 18 LSLATLAIHGGQSPDPSTGAVMPPIYATSTYAQSSPGEHQGFEYSRTHNPTRFAYERCVAALEGGTRAFAFASGMAATST 97 (400)
T ss_dssp CCHHHHHHHTTCCCCTTTCBSSCCBCCCSBBBCSBTTBSSSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred CCcchheeeCCCCCCCCCCCcCCCccccceeeccCccccCCcccccCCCHHHHHHHHHHHHHhCCCCEEEecCHHHHHHH
Confidence 367899999997665 4999999999999999877766677889999999999999999999999999999999999987
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhh-cccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRV-TPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~-~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 164 (386)
+++++++||+|+++++.|+++...+... ++..|++++.++..|++++++++++++++|++++|+||+|.+.|+++|.++
T Consensus 98 ~~~l~~~gd~Vi~~~~~y~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~e~~~np~G~~~~l~~i~~l 177 (400)
T 3nmy_A 98 VMELLDAGSHVVAMDDLYGGTFRLFERVRRRTAGLDFSFVDLTDPAAFKAAIRADTKMVWIETPTNPMLKLVDIAAIAVI 177 (400)
T ss_dssp HHTTSCTTCEEEEESSCCHHHHHHHHHTHHHHHCCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHHHcCCCCEEEEeCCCchHHHHHHHHhhHhhcCeEEEEECCCCHHHHHHHhccCCCEEEEECCCCCCCeeecHHHHHHH
Confidence 7788999999999999999887666555 667899999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEE-EEEEcChhHHHHHHHhhhhcCCCCChhhHHHH
Q 016612 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAG-VLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (386)
Q Consensus 165 a~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G-~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (386)
|+++|+++|+|++|+.+....+...++|+++.|++|+++|++..++| +++.+++++.+.+.......+...++..++++
T Consensus 178 a~~~g~~livDe~~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~~vv~~~~~~~~~l~~~~~~~g~~~~~~~a~~~ 257 (400)
T 3nmy_A 178 ARKHGLLTVVDNTFASPMLQRPLSLGADLVVHSATKYLNGHSDMVGGIAVVGDNAELAEQMAFLQNSIGGVQGPFDSFLA 257 (400)
T ss_dssp HHHTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECSCHHHHHHHHHHHHHHCCBCCHHHHHHH
T ss_pred HHHcCCEEEEECCCcccccCChhhcCCcEEEecCccccCCCCCcceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHHHHHH
Confidence 99999999999999877766677789999999999999887655678 67777777877777777777888899999999
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcc
Q 016612 244 LRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYF 322 (386)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~ 322 (386)
+++++.+..+.++..++++.+.++|++++.+..+.++++++++++.++.++.++.|++++|.+.. .+...++++.++..
T Consensus 258 l~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~V~~p~l~~~~~~~~~~~~~~g~G~~~~~~l~~~~~~~~~~~~~l~~~ 337 (400)
T 3nmy_A 258 LRGLKTLPLRMRAHCENALALAQWLETHPAIEKVIYPGLASHPQHVLAKRQMSGFGGIVSIVLKGGFDAAKRFCEKTELF 337 (400)
T ss_dssp HHHHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHHHHHHHHHCSSS
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHHcCCCEeEEECCCCCCCcCHHHHHHhCCCCCceEEEEeCCcHHHHHHHHHcCCcc
Confidence 99999999999999999999999999999998999999999999999988888999999999965 45688999999999
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
++..+.|+..+++.+|+.+++..++++.+.+.|+.++++|+|+|.|+++++++.|+++|+
T Consensus 338 ~~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~gi~~~liRlsvGle~~~dli~dl~~al~ 397 (400)
T 3nmy_A 338 TLAESLGGVESLVNHPAVMTHASIPVARREQLGISDALVRLSVGIEDLGDLRGDLERALV 397 (400)
T ss_dssp EECSCCCSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred eEecCCCCCcceeeCccccccccCCHHHHHhcCCCcCeEEEEeCcCCHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999997
No 3
>3ri6_A O-acetylhomoserine sulfhydrylase; PYR 5'-phosphate, gamma-elimination, direct sulfhydrylation, CY metabolism, protein thiocarboxylate, TR; 2.20A {Wolinella succinogenes}
Probab=100.00 E-value=3.2e-49 Score=373.15 Aligned_cols=374 Identities=33% Similarity=0.449 Sum_probs=295.8
Q ss_pred CccceeeccCCCCC-CCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCc
Q 016612 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTS 78 (386)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~ 78 (386)
+++|++++.|..++ .+|.+.+|+++++++..++.. ....+.|++.++|.++++++.+++++|.+..+++++
T Consensus 26 ~~~t~~~h~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~v~~~s 105 (430)
T 3ri6_A 26 GFTTRALHVPKAKRDVHGALRTPVYDNAAFEFENSDEIAQVSLGRALGHVYSRSSNPTVEDLEQRLKNLTGALGVLALGS 105 (430)
T ss_dssp CHHHHHHCCC--------------------------------------------CCHHHHHHHHHHHHHHTCSEEEEESC
T ss_pred CcchhheeCCCCCCCCCCCcCCCcccccccccCCHHHHHHHhhcccCCccccCCCCHHHHHHHHHHHHHHCCCcEEEECC
Confidence 46789999996655 489999999999998876442 234567888889999999999999999999999999
Q ss_pred HHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 79 GMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 79 gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
|++|+. ++.+++++||+|+++++.|+++...+...++..|++++.++.+|++++++++++++++|++++|+||+|.+.|
T Consensus 106 G~~Ai~~al~al~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~~~~v~~~d~~~l~~ai~~~t~~v~~e~p~NptG~~~d 185 (430)
T 3ri6_A 106 GMAAISTAILTLARAGDSVVTTDRLFGHTLSLFQKTLPSFGIEVRFVDVMDSLAVEHACDETTKLLFLETISNPQLQVAD 185 (430)
T ss_dssp HHHHHHHHHHHHCCTTCEEEEETTCCHHHHHHHHTHHHHTTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCCeecC
Confidence 999987 5667899999999999999998877666778899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChh-H----------------
Q 016612 158 IRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGER-L---------------- 220 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~-~---------------- 220 (386)
+++|.++|+++|+++|+|++++.+...++...++|+++.|++|+++|++...+|+++.+.+. +
T Consensus 186 l~~i~~la~~~g~~livD~a~~~~~~~~~~~~g~div~~S~sK~l~g~g~~~gG~vv~~~~~~~~~~~~~~~l~~~~g~~ 265 (430)
T 3ri6_A 186 LEALSKVVHAKGIPLVVDTTMTPPYLLEAKRLGVDIEVLSSTKFISGGGTSVGGVLIDHGLFEWKSLPSLAPYYAKAGPM 265 (430)
T ss_dssp HHHHHHHHHTTTCCEEEECTTSCTTTCCGGGGTCSEEEEECCCEEETTEEECCEEEEECSCSCGGGSTTTHHHHHHHGGG
T ss_pred HHHHHHHHHHcCCEEEEECCCcccccCChHHcCCEEEEECCcccccCCCCceEEEEEECChHHhhhccchhhhhhhhchh
Confidence 99999999999999999999999888778888999999999999988755668888854331 1
Q ss_pred --HHHH-HHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCC
Q 016612 221 --AKEL-YFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 297 (386)
Q Consensus 221 --~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 297 (386)
.... .......+..+++..+++.+++++.+..|+++..++++.+.++|++++.+..+.++++++.|++.++.++. +
T Consensus 266 ~~i~~~~~~~~~~~g~~~~~~~a~l~l~~l~~l~~r~~~~~~na~~la~~L~~~p~v~~V~~P~l~~~p~~~~~~~~~-g 344 (430)
T 3ri6_A 266 AFLYKARKEVFQNLGPSLSPHNAYLQSLGLETMALRIERSCQNAQELAHWLLSIPQVKCVNHPSLPDSPFYAIAKRQF-R 344 (430)
T ss_dssp HHHHHHHHTHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEEEECTTSTTSTTHHHHHHHC-S
T ss_pred hHHHHHHHHHHHhcCCCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhCCCCccEEECCCCCCCccHHHHHHhC-C
Confidence 1111 12233456778899999989999999999999999999999999999999899999999999999988877 8
Q ss_pred CCc-eEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHH
Q 016612 298 AGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISD 376 (386)
Q Consensus 298 ~~~-~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~ 376 (386)
.|+ +++|.+++.....++++.++..++.+++|+.++++++|+.++|..++.+.+...|+.+++||+|+|.|+++++++.
T Consensus 345 ~Gg~~lsf~l~~~~~~~~~~~~l~~~~~~~s~G~~~sli~~p~~~~h~~~~~~~~~~~g~~~~liRlsvG~E~~~dl~~d 424 (430)
T 3ri6_A 345 YAGSILTFELESKEASYRFMDALKLIRRATNIHDNKSLILSPYHVIYALNSHEERLKLEISPAMMRLSVGIEEIEDLKED 424 (430)
T ss_dssp SCCSEEEEECSSHHHHHHHHHHCSSSEECSCCSCSSCEEECTGGGC---------CGGGSCTTEEEEECCSSCHHHHHHH
T ss_pred CCceEEEEEECCHHHHHHHHHhCCcceecCCCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHH
Confidence 899 9999998878899999999999999999999999999999999999999888899999999999999999999999
Q ss_pred HHHHHh
Q 016612 377 LDKALR 382 (386)
Q Consensus 377 l~~~l~ 382 (386)
|+++|+
T Consensus 425 l~~al~ 430 (430)
T 3ri6_A 425 ILQALC 430 (430)
T ss_dssp HHHHHC
T ss_pred HHHhhC
Confidence 999984
No 4
>1ibj_A CBL, cystathionine beta-lyase; PLP-dependent enzyme, methionine biosynthesis, transsulfurat lyase; HET: PLP; 2.30A {Arabidopsis thaliana} SCOP: c.67.1.3
Probab=100.00 E-value=1.4e-47 Score=365.69 Aligned_cols=381 Identities=85% Similarity=1.281 Sum_probs=325.0
Q ss_pred CCCccceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHH
Q 016612 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (386)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~ 85 (386)
+..+++.+++++.+.++.+.+++|+.++..+...+....+.+.|++.|++.++++++++++++|.++.+++++|++|+.+
T Consensus 84 ~~~~~~~~i~l~~g~~~~~~~~~~i~~a~~~~~~~~~~~~~~~Y~~~g~~~~~~l~~~la~~~g~~~~i~~~sGt~al~~ 163 (464)
T 1ibj_A 84 EASVSTLLVNLDNKFDPFDAMSTPLYQTATFKQPSAIENGPYDYTRSGNPTRDALESLLAKLDKADRAFCFTSGMAALSA 163 (464)
T ss_dssp -CCHHHHHTCCCCSSCTTCCSSCCCCCCSBCCCSSSSCCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHH
T ss_pred cCCcCCeEEECCCCCCCCCCCCccHHhhhhhhhhcccccCCccccCCCCHHHHHHHHHHHHHhCCCeEEEECCHHHHHHH
Confidence 34556888999854467889999999988776555555667889877888999999999999999999999999999887
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la 165 (386)
++.++++||+|++++|.|+++...+...++..|.+++.++..|++++++++++++++|++++|+||+|.+.|+++|.++|
T Consensus 164 ~l~~~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~tk~v~l~~p~NptG~v~~l~~i~~la 243 (464)
T 1ibj_A 164 VTHLIKNGEEIVAGDDVYGGSDRLLSQVVPRSGVVVKRVNTTKLDEVAAAIGPQTKLVWLESPTNPRQQISDIRKISEMA 243 (464)
T ss_dssp HHTTSCTTCEEEEESSCCHHHHHHHHHTSGGGTCEEEEECTTSHHHHHHHCCSSEEEEEECSSCTTTCCCCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEECCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCceEEEEeCCCCCCCEeecHHHHHHHH
Confidence 66788999999999999999877666677889999999999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
+++|+++|+|++|+.+....+...++|+++.|+||+++|+.|+|+|+++++++.+.+.+.......+...++..++++..
T Consensus 244 ~~~gi~livDea~~~g~~~~~~~~~~div~~S~sK~~~g~~Gl~~G~l~~~~~~l~~~l~~~~~~~g~~~~~~~~~a~~~ 323 (464)
T 1ibj_A 244 HAQGALVLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGEKLAKEVYFLQNSEGSGLAPFDCWLCLR 323 (464)
T ss_dssp HTTTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEECSHHHHHHHHHHHHHTTCBCCHHHHHHHHH
T ss_pred HHcCCEEEEECCCcccccCChhhcCCEEEEECCcccccCCCCCcEEEEEEChHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999998876655556789999999999999888999999999876677767666655666778888888888
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceec
Q 016612 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 325 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~ 325 (386)
+++....+.+...+++..+.+++++++.++++++++|++++++.++.+..++.+++++|.+++....+.+.+.+...++.
T Consensus 324 al~~~~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~L~~~gi~ 403 (464)
T 1ibj_A 324 GIKTMALRIEKQQENARKIAMYLSSHPRVKKVYYAGLPDHPGHHLHFSQAKGAGSVFSFITGSVALSKHLVETTKYFSIA 403 (464)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHTCTTCCEEECTTSTTSTTHHHHTTTCSCCCSEEEEECSCHHHHHHHHHHCSSSEEC
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHhCCCceEEECCCCCCCcchHHHhccCCCCceEEEEEECCHHHHHHHHHhcCcceEe
Confidence 88888888888888999999999998888899999999999988876655567899999997654566799999989999
Q ss_pred cCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCCC
Q 016612 326 VSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGPL 386 (386)
Q Consensus 326 ~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~~ 386 (386)
++.|...++++.|+...+...+.+.+...|..+++||+|++.++++++++.|+++|++.++
T Consensus 404 v~~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlsvg~edi~~li~~L~~al~~~~~ 464 (464)
T 1ibj_A 404 VSFGSVKSLISMPCFMSHASIPAEVREARGLTEDLVRISAGIEDVDDLISDLDIAFKTFPL 464 (464)
T ss_dssp SCCCSSSCEEECTTTTTTCSCCSSSSSSSSCCTTCEEEECCSSCHHHHHHHHHHHHHSCCC
T ss_pred ecCCCCceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHhhcCC
Confidence 9999988999999876665555444445566688999999999999999999999998764
No 5
>3cog_A Cystathionine gamma-lyase; CTH, PLP, propargylglycine, SGC, inhibitor, structural genom stockholm, structural genomics consortium; HET: PLP; 2.00A {Homo sapiens} PDB: 2nmp_A* 3elp_B
Probab=100.00 E-value=2.2e-47 Score=359.29 Aligned_cols=377 Identities=42% Similarity=0.726 Sum_probs=321.6
Q ss_pred CccceeeccCCCCC-CC-CCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHH
Q 016612 8 GVSTLLMNFSNEFD-PY-GALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA 85 (386)
Q Consensus 8 ~~~~~~~~~~~~~~-~~-g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~ 85 (386)
++++++++.|..++ .+ |.+.+|+++++++..++......+.|++.++|...++++.+++++|.++.+++++|++|+.+
T Consensus 18 ~~~t~~~h~g~~~~~~~~~~~~~pi~~stt~~~~~~~~~~~~~y~r~~~p~~~~l~~~la~~~g~~~~i~~~sG~~ai~~ 97 (403)
T 3cog_A 18 HFATQAIHVGQDPEQWTSRAVVPPISLSTTFKQGAPGQHSGFEYSRSGNPTRNCLEKAVAALDGAKYCLAFASGLAATVT 97 (403)
T ss_dssp THHHHHHHTTCCGGGSTTCBSSCCBCCCSCBCCC--------------CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHH
T ss_pred CcccEEEeCCCCCCcCCCCCccCCeeccceeecCCccccCCCcccCCCCchHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 56789999996544 46 99999999999988776555556778888889999999999999999899999999998875
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la 165 (386)
++.++++||+|++++|.|+++...+...++..|++++.++.+|++++++.+++++++|++++|+||+|.+.|+++|.++|
T Consensus 98 ~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~~i~~~t~~v~~~~p~nptG~~~~l~~i~~la 177 (403)
T 3cog_A 98 ITHLLKAGDQIICMDDVYGGTNRYFRQVASEFGLKISFVDCSKIKLLEAAITPETKLVWIETPTNPTQKVIDIEGCAHIV 177 (403)
T ss_dssp HHTTSCTTCEEEEESSCCHHHHHHHHHTGGGGTCEEEEECTTSHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEeCCCcchHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCcCCeEEEEECCCCCCCeeeCHHHHHHHH
Confidence 54488999999999999998877666677889999999999999999999999999999999999999999999999999
Q ss_pred HHcC-CEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 166 HAHG-ALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 166 ~~~~-~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
+++| +++|+|++|+.+....+...++|+++.|+||+++|++++++|+++++++.+.+.+.......+...++..++++.
T Consensus 178 ~~~g~~~livD~~~~~~~~~~~~~~~~div~~S~sK~~~g~~~~~~G~v~~~~~~l~~~l~~~~~~~g~~~~~~~~~~~~ 257 (403)
T 3cog_A 178 HKHGDIILVVDNTFMSPYFQRPLALGADISMYSATKYMNGHSDVVMGLVSVNCESLHNRLRFLQNSLGAVPSPIDCYLCN 257 (403)
T ss_dssp TSSSCCEEEEECTTTCTTTCCTTTTTCSEEEEETTTTTTCSSCCCCEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred HHcCCCEEEEECCCcccccCCccccCCeEEEEcChhhccCCCCCeEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 9999 999999999988766666778999999999999988887899999976777777766666666777888888888
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcce
Q 016612 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFS 323 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~g 323 (386)
++++.+..+.++..+++..+.+++++++.++.+++++|+++|++.++.+..++.+++++|.+++ .....++++.+++..
T Consensus 258 ~~l~~l~~r~~~~~~n~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~l~~~~i~~ 337 (403)
T 3cog_A 258 RGLKTLHVRMEKHFKNGMAVAQFLESNPWVEKVIYPGLPSHPQHELVKRQCTGCTGMVTFYIKGTLQHAEIFLKNLKLFT 337 (403)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCHHHHHHHHHHCSSSE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECCCCCCCCcHHHHHhcCCCCceEEEEEecCCHHHHHHHHHhCCcce
Confidence 8888888889999999999999999998899999999999999988876666779999999853 456778888888887
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
...+.|+..+++++|+..++...+.+.+...|..+++||+|++.++++++++.|.++|+++
T Consensus 338 ~~~s~G~~~sl~~~p~~~~~~~~~~~~~~~~g~~~~~iRlSvg~e~~~d~i~~l~~al~~~ 398 (403)
T 3cog_A 338 LAESLGGFESLAELPAIMTHASVLKNDRDVLGISDTLIRLSVGLEDEEDLLEDLDQALKAA 398 (403)
T ss_dssp ECSCCSSSSCEEECTTTTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred EccCCCCcceeeecccccccccCCHHHHHhcCCCcCeEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 7889999999999999999988888888888988999999999999999999999999753
No 6
>1qgn_A Protein (cystathionine gamma-synthase); methionine biosynthesis, pyridoxal 5'-phosphate, gamma-famil; HET: PLP; 2.90A {Nicotiana tabacum} SCOP: c.67.1.3 PDB: 1i41_A* 1i48_A* 1i43_A*
Probab=100.00 E-value=1.4e-46 Score=355.96 Aligned_cols=376 Identities=32% Similarity=0.562 Sum_probs=326.9
Q ss_pred CCc-cceeeccCCCCC---CCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceE
Q 016612 7 PGV-STLLMNFSNEFD---PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRAL 74 (386)
Q Consensus 7 ~~~-~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i 74 (386)
.++ +|++++.|..++ .+|.+.+|+++++++..++.. ....+.|++.++|.++++++.+++++|.++.+
T Consensus 54 ~~~~~t~~~~~~~~~~~~~~~~~~~~Pi~~t~t~~~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~lA~l~g~~~~v 133 (445)
T 1qgn_A 54 LNSDGSVAIHAGERLGRGIVTDAITTPVVNTSAYFFNKTSELIDFKEKRRASFEYGRYGNPTTVVLEEKISALEGAESTL 133 (445)
T ss_dssp CCSHHHHHHHTTTTTCCSSCCSBSSCCBCCCSBBCBSSHHHHHHHHTTSSCCCCBGGGCCHHHHHHHHHHHHHHTCSEEE
T ss_pred CCCcccEEEecCCCCCcCCCCCCcCCCcccCCceecCCHHHHHhhhccccCCccccCCCChHHHHHHHHHHHHhCCCcEE
Confidence 345 788889896654 589999999999999876542 23467788888899999999999999999999
Q ss_pred EeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCc-eEEEEeCCCCCC
Q 016612 75 CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWT-KLVWVESPTNPR 152 (386)
Q Consensus 75 ~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~-~~v~~~~~~npt 152 (386)
++++|++|+. ++.+++++||+|+++++.|+++...+...++..|++++.++..|++++++++++++ ++|++++|+||+
T Consensus 134 ~~~sG~~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d~~~l~~ai~~~tv~lV~le~p~Npt 213 (445)
T 1qgn_A 134 LMASGMCASTVMLLALVPAGGHIVTTTDCYRKTRIFIETILPKMGITATVIDPADVGALELALNQKKVNLFFTESPTNPF 213 (445)
T ss_dssp EESCHHHHHHHHHHHHSCSSCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECSSCHHHHHHHHHHSCEEEEEEESSCTTT
T ss_pred EeCCHHHHHHHHHHHHhCCCCEEEEcCCCchhHHHHHHHHHHHcCCEEEEeCCCCHHHHHHHhccCCCCEEEEeCCCCCC
Confidence 9999999987 45568899999999999999887666556778999999999999999999998888 999999999999
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcC
Q 016612 153 QQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG 232 (386)
Q Consensus 153 G~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~ 232 (386)
|.+.|+++|.++|+++|+++|+|++|+.+....+...++|+++.|+||+++|++.+++|++++++ ++.+.+.......+
T Consensus 214 G~v~dl~~I~~la~~~g~~livD~a~~~~~~~~~~~~g~Div~~S~sK~~gg~gd~~~G~l~~~~-~l~~~l~~~~~~~g 292 (445)
T 1qgn_A 214 LRCVDIELVSKLCHEKGALVCIDGTFATPLNQKALALGADLVLHSATKFLGGHNDVLAGCISGPL-KLVSEIRNLHHILG 292 (445)
T ss_dssp CCCCCHHHHHHHHHHTTCEEEEECTTTCTTTCCTTTTTCSEEEECTTTTTTCSSSCCCEEEEECH-HHHHHHHHHHHHHC
T ss_pred CcccCHHHHHHHHHHcCCEEEEECCCcccccCCccccCCEEEEECCcccccccccceEEEEEECH-HHHHHHHHHHHHhC
Confidence 99999999999999999999999999988776677789999999999999776556789999874 56666665555566
Q ss_pred CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHh
Q 016612 233 SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LAL 311 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ 311 (386)
...++..++++.++++.+..++++..++++.+.++|++++.+..+.++++++.|++.+...+.++.+++++|.+++ ...
T Consensus 293 ~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~l~~~p~~~~~~~~~~g~g~ivsf~l~~~~~~ 372 (445)
T 1qgn_A 293 GALNPNAAYLIIRGMKTLHLRVQQQNSTALRMAEILEAHPKVRHVYYPGLQSHPEHHIAKKQMTGFGGAVSFEVDGDLLT 372 (445)
T ss_dssp CCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSSSSTTHHHHHHHCSCCCSEEEEEESSCHHH
T ss_pred CCCCHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCceEEECCCCCCCchHHHHHHhccCCCcEEEEEECCCHHH
Confidence 6778888888888999988899999999999999999988777788899998888888766666789999999965 345
Q ss_pred HHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 312 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 312 ~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
..++++.++.+++.++.|+.++++.+|+..+|..++.+.+.+.|+.+++||+|+|.|+++++++.|++++++
T Consensus 373 ~~~~l~~l~~~~i~~s~G~~~sl~~~p~~~~h~~~~~~~~~~~g~~~~~iRlSvG~Edid~li~~L~~al~~ 444 (445)
T 1qgn_A 373 TAKFVDALKIPYIAPSFGGCESIVDQPAIMSYWDLSQSDRAKYGIMDNLVRFSFGVEDFDDLKADILQALDS 444 (445)
T ss_dssp HHHHHHHCSSSEECSCCCSSSCEEECHHHHHSTTSCHHHHHTTTCCSSEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCceEeccCCCCceeeecccccccccCCHHHHHhcCCCCCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 889999999899999999999999999999999999999999999899999999999999999999999975
No 7
>3qhx_A Cystathionine gamma-synthase METB (CGS); structural genomics, seattle structural genomics center for infectious disease, ssgcid, CGS_LIKE; HET: LLP EPE; 1.65A {Mycobacterium ulcerans} SCOP: c.67.1.0 PDB: 3qi6_A*
Probab=100.00 E-value=1.7e-46 Score=352.34 Aligned_cols=372 Identities=44% Similarity=0.716 Sum_probs=329.6
Q ss_pred CccceeeccCCCCC-CCCCcccceeeeeeeecCCCCC-CCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-
Q 016612 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSATE-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA- 84 (386)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~-~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~- 84 (386)
++++++++.|..++ .+|.+.+|+++++++..++... ...+.|++.++|.++++++.+++++|.++.+++++|++|+.
T Consensus 17 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~y~r~~~~~~~~l~~~la~~~g~~~~~~~~sGt~A~~~ 96 (392)
T 3qhx_A 17 GLATRAIHSGYRPDPATGAVNAPIYASSTFAQDGVGGLRGGYEYARTGNPTRTALEAALAAVEDAAFGRAFSSGMAAADC 96 (392)
T ss_dssp CHHHHHHHSSCCCCTTTCBSSCCBCCCSBBCCSSTTCCBTTBCBTTTCCHHHHHHHHHHHHHTTCSEEEEESSHHHHHHH
T ss_pred CcchhheeCCCCCCCCCCCccCCcccCcceEecCcccccCCccccCCCChHHHHHHHHHHHHhCCCcEEEECCHHHHHHH
Confidence 46788999996655 4899999999999988765543 33677888888999999999999999999999999999987
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHH
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 164 (386)
++..++++||+|+++++.|+++...+...++..|.+++.++.+|++++++++++++++|++++|+||+|.+.|+++|.++
T Consensus 97 al~~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l 176 (392)
T 3qhx_A 97 ALRAMLRPGDHVVIPDDAYGGTFRLIDKVFTGWNVEYTPVALADLDAVRAAIRPTTRLIWVETPTNPLLSIADIAGIAQL 176 (392)
T ss_dssp HHHHHCCTTCEEEEETTCCHHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHH
T ss_pred HHHHHhCCCCEEEEeCCCcchHHHHHHHHHHhcCcEEEEeCCCCHHHHHHhhCCCCeEEEEECCCCCCcEEecHHHHHHH
Confidence 45568899999999999999887777677788999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 165 AHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 165 a~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
|+++|+++|+|++|+.+....+...++|+++.|+||++++++++++|+++++++.+.+.+.......+...++..++++.
T Consensus 177 a~~~g~~li~D~~~~~~~~~~~~~~~~di~~~S~sK~lg~~g~~~~G~v~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~~ 256 (392)
T 3qhx_A 177 GADSSAKVLVDNTFASPALQQPLSLGADVVLHSTTKYIGGHSDVVGGALVTNDEELDQSFAFLQNGAGAVPGPFDAYLTM 256 (392)
T ss_dssp HHHHTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred HHHcCCEEEEECCCcccccCChHHhCCcEEEEcCccccCCCCCceEEEEEECcHHHHHHHHHHHHhcCCCCCHHHHHHHH
Confidence 99999999999999988776777789999999999999776657899999987777777777777677888889999988
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcce
Q 016612 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFS 323 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~g 323 (386)
.+++.+..+.++..++++.+.+++++++.+..+.+++++.++++.++.+..++.+++++|.+.+ ....+++++.++..+
T Consensus 257 ~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~~~~~l~~~~ 336 (392)
T 3qhx_A 257 RGLKTLVLRMQRHSENAAAVAEFLAEHPAISTVLYPGLPSHPGHAVAARQMRGFGGMVSVRMRAGRTAAEQLCAKTNIFI 336 (392)
T ss_dssp HHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTCHHHHHHHHHHCSSSE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCcceEECCCCCCCCCHHHHHHhCCCCceEEEEEeCCcHHHHHHHHHhCCCce
Confidence 8999888999999999999999999998888889999999999998888888899999999965 566889999999999
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
+.++.|+..++++.|...++..++.+ ..++.++.||+|++.++++++++.|.++|+
T Consensus 337 ~~~s~G~~~sl~~~~~~~~~~~~~~~---~~g~~~~~iRlSvg~e~~~~~i~~l~~al~ 392 (392)
T 3qhx_A 337 LAESLGSVESLIEHPSAMTHASTAGS---QLEVPDDLVRLSVGIEDVADLLDDLKQALG 392 (392)
T ss_dssp ECSCCCCSSCEEECGGGTSCGGGBTT---BCCCCTTEEEEECCSSCHHHHHHHHHHHHC
T ss_pred ECCCCCCCCceeeCcccccccccCHH---HcCCCCCeEEEEeccCCHHHHHHHHHHHhC
Confidence 99999999999888988877766554 567789999999999999999999999874
No 8
>3acz_A Methionine gamma-lyase; L-methionine; HET: LLP; 1.97A {Entamoeba histolytica} PDB: 3aej_A* 3ael_A* 3aem_A* 3aen_A* 3aeo_A* 3aep_A*
Probab=100.00 E-value=1.5e-45 Score=345.75 Aligned_cols=378 Identities=38% Similarity=0.645 Sum_probs=326.1
Q ss_pred CCCCccceeeccCCCCCCCCCcccceeeeeeeecCCC--------CCCCCccccCCCCchHHHHHHHHHhhcCCCceEEe
Q 016612 5 EEPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSA--------TENGPYDYTRSGNPTRDALESLLAKLDKADRALCF 76 (386)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~--------~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~ 76 (386)
.+.+++++.++.| ..+.+|.+.+|+++++++..++. .....+.|++.++|...++++.+++++|.++.+++
T Consensus 2 ~~~~~~t~~~~~~-~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~i~~ 80 (389)
T 3acz_A 2 TAQDITTTLLHPK-GDHVLHSHAYPIFQTSTFCFDSTQQGADLFMGKGEGHIYSRLGNPTVEQFEEMVCSIEGAAGSAAF 80 (389)
T ss_dssp -CCCHHHHHHSCS-SCCSTTBSSCCBCCCSBBCCSSHHHHHHHHTTCSSCCCBTTTCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCcceeEEecC-CCCCCCCCCCCcccCCceecCChHHHHHhhcCCCCCcccCCCCChHHHHHHHHHHHHhCCCeEEEe
Confidence 3456788999999 55568999999999999887553 12345778888889999999999999999999999
Q ss_pred CcHHHHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc
Q 016612 77 TSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 77 ~~gt~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~ 155 (386)
++|++|+.++ .+++++||+|+++++.|+++...+...++..|++++.++..|++++++.+++++++|++++|+||+|.+
T Consensus 81 ~sG~~ai~~~~~~~~~~gd~vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~ 160 (389)
T 3acz_A 81 GSGMGAISSSTLAFLQKGDHLIAGDTLYGCTVSLFTHWLPRFGIEVDLIDTSDVEKVKAAWKPNTKMVYLESPANPTCKV 160 (389)
T ss_dssp SSHHHHHHHHHTTTCCTTCEEEEESSCCHHHHHHHHHHHHHTTCEEEEECTTCHHHHHHTCCTTEEEEEEESSCTTTCCC
T ss_pred CCHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCCee
Confidence 9999998754 457899999999999999887766666778999999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCC
Q 016612 156 CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL 235 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~ 235 (386)
.|+++|.++|+++|+++|+|++|+.+....+...++|+++.|+||+++++++..+|+++++++++.+.+.......+...
T Consensus 161 ~~l~~i~~~~~~~~~~livD~~~~~~~~~~~~~~~~di~~~S~sK~~~~~~~~~~G~v~~~~~~~~~~l~~~~~~~g~~~ 240 (389)
T 3acz_A 161 SDIKGIAVVCHERGARLVVDATFTSPCFLKPLELGADIALHSVSKYINGHGDVIGGVSSAKTAEDIATIKFYRKDAGSLM 240 (389)
T ss_dssp CCHHHHHHHHHHHTCEEEEECTTTCTTTCCGGGTTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHCCCC
T ss_pred cCHHHHHHHHHHcCCEEEEECCCccccccCccccCCeEEEECChhhccCCCCceeEEEEECcHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999999887765566678999999999999877653249999986356666665555456667
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHH
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHV 315 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l 315 (386)
++..+++...+++.+..+.++..++++.+.+++++++.++.+++++|++++++.++.+..++.+++++|.+.+.....++
T Consensus 241 ~~~~~~~~~~~l~~l~~r~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~~~~~~~~~~~~g~g~~~~~~l~~~~~~~~~ 320 (389)
T 3acz_A 241 APMDAFLCARGMKTLPIRMQIHMENGLKVAKFLEQHEKIVKVNHPGLESFPGHDIAKKQMTGYGSTFLFEMKSFEAAKKL 320 (389)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSHHHHHHH
T ss_pred CHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCCeEEEEEECCHHHHHHH
Confidence 88888888888888888889999999999999999988889999999999999888766567889999999665667788
Q ss_pred HhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 316 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
++.+++.....+.|+..+++.+|+..++..++++.+...|+.+++||+|++.++++++++.|.++|++
T Consensus 321 l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRlsvg~~~~~~li~~l~~al~~ 388 (389)
T 3acz_A 321 MEHLKVCTLAVSLGCVDTLIEHPASMTHAAVPENIMRKQGITPELVRISVGIENVDDIIADLKQALEL 388 (389)
T ss_dssp HTTCSSSEEBSCCCCSSCEEECTTTTTTSSSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHTC
T ss_pred HHhCCCcEECcCCCCcccEeeCCcccccccCCHHHHHhcCCCcCeEEEEeccCCHHHHHHHHHHHHhh
Confidence 88888877788889999999999999999999988888899899999999999999999999999975
No 9
>2fq6_A Cystathionine beta-lyase; protein-inhibitor complex, PLP cofactor covalently bound to inhibitor; HET: P3F; 1.78A {Escherichia coli} SCOP: c.67.1.3 PDB: 2gqn_A* 1cl1_A* 1cl2_A*
Probab=100.00 E-value=2.4e-46 Score=352.34 Aligned_cols=372 Identities=26% Similarity=0.443 Sum_probs=316.8
Q ss_pred CccceeeccCCCCC-CCCCcccceeeeeeeecCCCC--------C-CCCccccCCCCchHHHHHHHHHhhcCCCceEEeC
Q 016612 8 GVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------E-NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (386)
Q Consensus 8 ~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~-~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~ 77 (386)
+++|++++.|..++ .+|.+.+|+++++++..++.. . .+.+.|++.++|.++++++.+++++|.++.++++
T Consensus 25 ~~~t~~~~~~~~~~~~~~~~~~pi~~s~t~~~~~~~~~~~~~~~~~~~~~~y~r~~~p~~~~le~~lA~l~g~~~~i~~s 104 (415)
T 2fq6_A 25 KLDTQLVNAGRSKKYTLGAVNSVIQRASSLVFDSVEAKKHATRNRANGELFYGRRGTLTHFSLQQAMCELEGGAGCVLFP 104 (415)
T ss_dssp CHHHHHHHTTCCHHHHTTBSSCCBCCCSCBCCSSHHHHHHHHHTTTTTSCCCTTTCCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CcCceeEeCCCCCCCCCCCEeCCeecccceeeCCHHHHHHhhccccCCCccccCCCCchHHHHHHHHHHHhCCCeEEEeC
Confidence 57799999996644 489999999999999876542 1 3457789889999999999999999999999999
Q ss_pred cHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccc
Q 016612 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (386)
Q Consensus 78 ~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~ 156 (386)
+|++|++ ++.+++++||+|+++++.|+++...+...++..|++++.++.+|+++++++++++|++|++++|+||+|.+.
T Consensus 105 sGt~Ai~~al~~l~~~Gd~Vi~~~~~y~~~~~~~~~~l~~~G~~v~~v~~~d~~~le~ai~~~tklV~~e~~~NptG~v~ 184 (415)
T 2fq6_A 105 CGAAAVANSILAFIEQGDHVLMTNTAYEPSQDFCSKILSKLGVTTSWFDPLIGADIVKHLQPNTKIVFLESPGSITMEVH 184 (415)
T ss_dssp SHHHHHHHHHHTTCCTTCEEEEETTSCHHHHHHHHHTGGGGTCEEEEECTTCGGGGGGGCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEECCCCHHHHHHhhccCCcEEEEECCCCCCCEee
Confidence 9999987 455688999999999999999887776677788999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHH--cCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCC
Q 016612 157 DIRKIAEMAHA--HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (386)
Q Consensus 157 ~l~~i~~la~~--~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~ 234 (386)
|+++|.++|++ +|+++|+|++|+.+....+...++|++++|+||++++++++++|+++++++ +.+.+.......+..
T Consensus 185 dl~~I~~la~~~~~g~~livD~a~a~~~~~~p~~~g~Div~~S~sK~lg~~g~~~~G~l~~~~~-~~~~l~~~~~~~G~~ 263 (415)
T 2fq6_A 185 DVPAIVAAVRSVVPDAIIMIDNTWAAGVLFKALDFGIDVSIQAATKYLVGHSDAMIGTAVCNAR-CWEQLRENAYLMGQM 263 (415)
T ss_dssp CHHHHHHHHHHHCTTCEEEEECTTTTTTSSCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECTT-THHHHHHHHHHTTCC
T ss_pred cHHHHHHHHHhhcCCCEEEEECCCcccccCCccccCCeEEEEeCccccCCCCCceEEEEEeCHH-HHHHHHHHHHhcCCC
Confidence 99999999999 999999999999876666677799999999999998776666899998764 555565555555667
Q ss_pred CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC---HHh
Q 016612 235 LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LAL 311 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~ 311 (386)
+++..+++...+++.+..++++..+++..+.++|++.+.+..+.+++++.++++.++.++.++.+++++|.+++ ...
T Consensus 264 ~~~~~a~~~~~~l~~l~~r~~~~~~n~~~l~~~L~~~~~v~~v~~p~l~~~~~~~~~~~~~~~~g~i~sf~l~g~~~~~~ 343 (415)
T 2fq6_A 264 VDADTAYITSRGLRTLGVRLRQHHESSLKVAEWLAEHPQVARVNHPALPGSKGHEFWKRDFTGSSGLFSFVLKKKLNNEE 343 (415)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSCCCSEEEEEESSCCCHHH
T ss_pred CCHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEECCCCCHHH
Confidence 77887887778888888899999999999999999998887888999999998888776656678999999975 567
Q ss_pred HHHHHhhcCcceeccCCCCccccccc--cccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 312 SKHVVETTKYFSITVSFGSVKSLISM--PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 312 ~~~l~~~l~~~gi~~~~G~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
...+++.++..++.++.|+.+++..+ |+..++.... ...|..++.||+|+|.++++++++.+.++|+++
T Consensus 344 ~~~~l~~l~~~~~a~s~G~~~s~~~~~~p~~~s~~~~~----~~~g~~~~~iRlS~G~e~~~d~i~~l~~al~~~ 414 (415)
T 2fq6_A 344 LANYLDNFSLFSMAYSWGGYESLILANQPEHIAAIRPQ----GEIDFSGTLIRLHIGLEDVDDLIADLDAGFARI 414 (415)
T ss_dssp HHHHHTTCSSCEECSCCCSSSCEEEEECHHHHHTTCTT----CCCCCCSCEEEEECCSSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHhCCcCeEeccCCCCceeEEecCCCccccccch----hhcCCCCCEEEEEecCCCHHHHHHHHHHHHHhh
Confidence 89999999999999999999998877 7655432100 123566799999999999999999999999864
No 10
>1n8p_A Cystathionine gamma-lyase; three open alpha/beta structures; HET: PLP; 2.60A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=100.00 E-value=1.7e-44 Score=338.77 Aligned_cols=377 Identities=40% Similarity=0.671 Sum_probs=316.3
Q ss_pred CCCccceeeccCCCCCCCCCcccceeeeeeeecCCCCCC-CCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH
Q 016612 6 EPGVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSATEN-GPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA 84 (386)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~ 84 (386)
+-++++++++.|...+.+|.+.+|+++++++..++.... ..+.|++.+.+..+++++.+++++|.++.+++++|++|++
T Consensus 5 ~~~~~t~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lr~~la~~~g~~~~i~~~sGt~a~~ 84 (393)
T 1n8p_A 5 SDKFATKAIHAGEHVDVHGSVIEPISLSTTFKQSSPANPIGTYEYSRSQNPNRENLERAVAALENAQYGLAFSSGSATTA 84 (393)
T ss_dssp SCCHHHHHHHTTCCCCSSCCSSCCBCCCSBCCBSSSSSBSSSCCBTTTCCHHHHHHHHHHHHHTTCSEEEEESCHHHHHH
T ss_pred CCCccceEEecCCCccCCCCcCCCcccccceeeccccccccCcceecCCChhHHHHHHHHHHHhCCCcEEEECChHHHHH
Confidence 336789999998655578999999999999988654432 4567887777889999999999999999999999999997
Q ss_pred HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHH
Q 016612 85 AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEM 164 (386)
Q Consensus 85 ~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l 164 (386)
+++.++++||+|+++.+.|++....+...++..|.+++.++.+| +++++++++++++|++++|+||+|.+.|+++|.++
T Consensus 85 ~al~~~~~gd~Vi~~~~~y~~~~~~~~~~~~~~G~~v~~v~~~d-~~l~~~i~~~t~lv~~~~~~nptG~~~~l~~i~~l 163 (393)
T 1n8p_A 85 TILQSLPQGSHAVSIGDVYGGTHRYFTKVANAHGVETSFTNDLL-NDLPQLIKENTKLVWIETPTNPTLKVTDIQKVADL 163 (393)
T ss_dssp HHHHTSCSSCEEEEESSCCHHHHHHHHHTSTTTCSCCEEESSHH-HHHHHHSCSSEEEEEECSSCTTTCCCCCHHHHHHH
T ss_pred HHHHHcCCCCEEEEeCCCchHHHHHHHHHHHHcCcEEEEeCCCh-HHHHHhcccCceEEEEECCCCCcceecCHHHHHHH
Confidence 54448899999999999998776555557788899999999888 99999999899999999999999999999999999
Q ss_pred HHHc----CCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceE-EEEEEcChhHHHHHHHhhhhcCCCCChhh
Q 016612 165 AHAH----GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAEGSGLAPFD 239 (386)
Q Consensus 165 a~~~----~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~-G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (386)
|+++ |+++|+|++|+.+...++...++|++++|+||+++ ++|.|. |+++++++.+.+.+.......+...++..
T Consensus 164 a~~~~~~~~~~livD~a~~~~~~~~~~~~~~di~~~S~sK~~g-~~G~rigG~~~~~~~~~~~~l~~~~~~~g~~~~~~~ 242 (393)
T 1n8p_A 164 IKKHAAGQDVILVVDNTFLSPYISNPLNFGADIVVHSATKYIN-GHSDVVLGVLATNNKPLYERLQFLQNAIGAIPSPFD 242 (393)
T ss_dssp HHHHTTTTTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTT-CSSCCCCEEEEESCHHHHHHHHHHHHHHCCCCCHHH
T ss_pred HHHhCCCCCCEEEEeCCccccccCCHHHcCCeEEEEECccccc-CCCCceeEEEEeCCHHHHHHHHHHHHhcCCCCCHHH
Confidence 9999 99999999998776555666789999999999995 456666 99998656666666655554555667777
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCC-cceEecCCCCCCCchhhhhhccCC-C-CceEEEEeC-CHHhHHHH
Q 016612 240 CWICLRGVKTMALRVEKQQDNAQKIAEFLASHPR-VKKVNYAGLPEHPGHELHYSQAKG-A-GSVLSFLTG-SLALSKHV 315 (386)
Q Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~~~l~~~~~~~i~~~~~~~-~-~~~~~~~~~-~~~~~~~l 315 (386)
++++..+++.+..+.++..++++.+.+++++.+. +..+.++++...+++.++....++ . +++++|.++ .....+.+
T Consensus 243 ~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~~l~~v~~p~l~~~~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~~~~ 322 (393)
T 1n8p_A 243 AWLTHRGLKTLHLRVRQAALSANKIAEFLAADKENVVAVNYPGLKTHPNYDVVLKQHRDALGGGMISFRIKGGAEAASKF 322 (393)
T ss_dssp HHHHHHHHTTHHHHHHHHHHHHHHHHHHHTSCTTTEEEEECTTSTTSTTHHHHHHHSGGGCCCSEEEEEESSCHHHHHHH
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHHHHHhCCCCceEEECCCCCCCccHHHHHhhCCCCCCccEEEEEeCCcHHHHHHH
Confidence 7777778888888889999999999999998876 666778888888887777654444 5 789999996 44568899
Q ss_pred HhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 316 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
++.++..++.++.|++.++..+|+...|..++.+.+.+.|..++.||+|++.++++++++.+.++|+++
T Consensus 323 l~~l~~~~~~~s~G~~~s~~~~p~~~~h~~~~~~~~~~~g~~~~~iRlS~g~~~~~~~i~~l~~al~~~ 391 (393)
T 1n8p_A 323 ASSTRLFTLAESLGGIESLLEVPAVMTHGGIPKEAREASGVFDDLVRISVGIEDTDDLLEDIKQALKQA 391 (393)
T ss_dssp HHHCSSSEECSCCCCSSCEEECTTTTTSCSSCTTTTTTTSCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HhhCCcceECCCCCCCcceeeccccccccccCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 999999999999999988888888888887777777788888899999999999999999999999764
No 11
>1e5e_A MGL, methionine gamma-lyase; methionine biosynthesis, PLP-dependent enzymes, C-S gamma lyase; HET: PPJ; 2.18A {Trichomonas vaginalis} SCOP: c.67.1.3 PDB: 1e5f_A*
Probab=100.00 E-value=6.7e-44 Score=335.99 Aligned_cols=375 Identities=36% Similarity=0.639 Sum_probs=318.2
Q ss_pred CccceeeccCCCCCCCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcH
Q 016612 8 GVSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (386)
Q Consensus 8 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (386)
++++++++.|......+.+.+|+++++.+..++.. ....+.|++.|.|..+++++.+++++|.++.+++++|
T Consensus 7 ~~~t~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~~~~~~~~l~~~ia~~~g~~~~i~~~~g 86 (404)
T 1e5e_A 7 TPATACIHANPQKDQFGAAIPPIYQTSTFVFDNCQQGGNRFAGQESGYIYTRLGNPTVSNLEGKIAFLEKTEACVATSSG 86 (404)
T ss_dssp CHHHHHHHSSCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHTTSSCSCCBTTTCCHHHHHHHHHHHHHHTCSEEEEESSH
T ss_pred CccceeeecCCCCCCCCCcCCCCcCCCccccCCHHHHHHhhcCCcCCccccCCcChHHHHHHHHHHHHhCCCcEEEeCCh
Confidence 35788899885434579999999998888775542 2346778887888999999999999999999999999
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccH
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDI 158 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l 158 (386)
++++. ++.+++++||+|++++|.|+++...+...++..|++++.++..|++++++.+++++++|++++|+||||.+.|+
T Consensus 87 ~~ai~~~~~~l~~~gd~Vl~~~~~y~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~t~~v~l~~p~NptG~v~~l 166 (404)
T 1e5e_A 87 MGAIAATVLTILKAGDHLISDECLYGCTHALFEHALTKFGIQVDFINTAIPGEVKKHMKPNTKIVYFETPANPTLKIIDM 166 (404)
T ss_dssp HHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHHCCTTEEEEEEESSCTTTCCCCCH
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCcEEEEECCCCCCCcccCH
Confidence 99987 45568899999999999999987766556778999999999989999999999999999999999999999999
Q ss_pred HHHHHHHHH-cCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceE-EEEEEcChhHHHHHHHhhhhc-CCCC
Q 016612 159 RKIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAE-GSGL 235 (386)
Q Consensus 159 ~~i~~la~~-~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~-G~i~~~~~~~~~~~~~~~~~~-~~~~ 235 (386)
++|.++|++ +|+++|+|++|+.+....+...++|+++.|+||++++++ .|+ |+++++++.+.+.+....... +...
T Consensus 167 ~~i~~la~~~~~~~li~De~~~~~~~~~~~~~~~di~~~S~sK~~~~~g-~ri~G~~~~~~~~~~~~l~~~~~~~~g~~~ 245 (404)
T 1e5e_A 167 ERVCKDAHSQEGVLVIADNTFCSPMITNPVDFGVDVVVHSATKYINGHT-DVVAGLICGKADLLQQIRMVGIKDITGSVI 245 (404)
T ss_dssp HHHHHHHHTSTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSS-CCCCEEEEECHHHHHHHHHTCCCCCCCCCC
T ss_pred HHHHHHHHhhcCCEEEEECCCchhhhCCccccCCEEEEEcCccccCCCC-CCeEEEEEECHHHHHHHHHHHHHhCCCCCC
Confidence 999999999 999999999999877555556789999999999997764 575 999998654443565554444 5567
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHH
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKH 314 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~ 314 (386)
++..++++..+++.+..+.++..++.+.+.+++++++.+...++++|+++|++.++.+..++.++++.|.+++. +...+
T Consensus 246 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 325 (404)
T 1e5e_A 246 SPHDAWLITRGLSTLNIRMKAESENAMKVAEYLKSHPAVEKVYYPGFEDHEGHDIAKKQMRMYGSMITFILKSGFEGAKK 325 (404)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTCSSSTTHHHHHHHCSSCCSEEEEEETTHHHHHHH
T ss_pred CHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHHhCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEeCCCHHHHHH
Confidence 78888888888888888888889999999999999887778899999999999888766567799999998764 45677
Q ss_pred HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 315 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 315 l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
+++++++.....++|+..+++++|+...+..++.+.+...|+.+++||||++.++++++++.|++++++
T Consensus 326 ~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~e~~~~li~~l~~al~~ 394 (404)
T 1e5e_A 326 LLDNLKLITLAVSLGGCESLIQHPASMTHAVVPKEEREAAGITDGMIRLSVGIEDADELIADFKQGLDA 394 (404)
T ss_dssp HHHTCSSSEESSCCCSSSCEEECGGGTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHH
T ss_pred HHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCCCCHHHHHHHHHHHHHH
Confidence 888888766778889999999999999998888888888888889999999999999999999999875
No 12
>1gc0_A Methionine gamma-lyase; pyridoxal-5'-phosphate; HET: LLP; 1.70A {Pseudomonas putida} SCOP: c.67.1.3 PDB: 1gc2_A* 1pg8_A* 1ukj_A* 2o7c_A*
Probab=100.00 E-value=2.5e-43 Score=331.86 Aligned_cols=378 Identities=37% Similarity=0.620 Sum_probs=301.9
Q ss_pred CCccceeeccCCCC-CCCCCcccceeeeeeeecCCCCC--------CCCccccCCCCchHHHHHHHHHhhcCCCceEEeC
Q 016612 7 PGVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATE--------NGPYDYTRSGNPTRDALESLLAKLDKADRALCFT 77 (386)
Q Consensus 7 ~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~ 77 (386)
.++++++++.|..+ +.+|.+.+|++.++++..++... ...+.|++.+.+..+++++.+++++|.++.++++
T Consensus 8 ~~~~t~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~l~~~la~~~g~~~~i~~~ 87 (398)
T 1gc0_A 8 PGFATRAIHHGYDPQDHGGALVPPVYQTATFTFPTVEYGAACFAGEQAGHFYSRISNPTLNLLEARMASLEGGEAGLALA 87 (398)
T ss_dssp CCHHHHHHHTTCCGGGGTTBSSCCBCCCSCBCCC---------------------CCHHHHHHHHHHHHHHTCSEEEEES
T ss_pred CCcCceeEeCCCCCCCCCCCcCCCccCCCccccCCHHHHHHhhcCCcCCCcccCCCChHHHHHHHHHHHHhCCCcEEEEC
Confidence 35678899998654 35899999999999887765421 1234566667789999999999999999999999
Q ss_pred cHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccc
Q 016612 78 SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQIC 156 (386)
Q Consensus 78 ~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~ 156 (386)
+|++|+. ++.+++++||+|+++++.|+++...+...++..|++++.++..|++++++.+++++++|++++|+||+|.+.
T Consensus 88 sG~~a~~~~l~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~ 167 (398)
T 1gc0_A 88 SGMGAITSTLWTLLRPGDEVLLGNTLYGCTFAFLHHGIGEFGVKLRHVDMADLQALEAAMTPATRVIYFESPANPNMHMA 167 (398)
T ss_dssp SHHHHHHHHHHHHCCTTCEEEEESSCCSHHHHHHHHTGGGGTCEEEEECTTCHHHHHHHCCTTEEEEEEESSCTTTCCCC
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECCCCHHHHHHhcCCCCeEEEEECCCCCCcccc
Confidence 9999987 556678999999999999999887766666788999999999999999999999999999999999999999
Q ss_pred cHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh-cCCCC
Q 016612 157 DIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA-EGSGL 235 (386)
Q Consensus 157 ~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~-~~~~~ 235 (386)
|+++|.++|+++|+++|+|++|+.+....+...++|+++.|+||+++++++..+|+++++++.+.+.+...... .+...
T Consensus 168 ~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~d~~~~S~sK~~~~~~~~~~G~l~~~~~~~~~~~~~~~~~~~~~~~ 247 (398)
T 1gc0_A 168 DIAGVAKIARKHGATVVVDNTYCTPYLQRPLELGADLVVHSATKYLSGHGDITAGIVVGSQALVDRIRLQGLKDMTGAVL 247 (398)
T ss_dssp CHHHHHHHHGGGTCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTTCSSSCCCEEEEECHHHHHHHHHTHHHHHTCCCC
T ss_pred cHHHHHHHHHHcCCEEEEECCCcccccCCchhhCceEEEECCccccCCCCCCeEEEEEEChHHHHHHHHHHhhccCCCCC
Confidence 99999999999999999999998776655566789999999999997765433599998765454445554444 55667
Q ss_pred ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHH
Q 016612 236 APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKH 314 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~ 314 (386)
++..++++..+++.+..+.++..++++.+.+++++.+.+..+.++++++++++.++.+..++.+++++|.+.+ .....+
T Consensus 248 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~~v~~v~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 327 (398)
T 1gc0_A 248 SPHDAALLMRGIKTLNLRMDRHCANAQVLAEFLARQPQVELIHYPGLASFPQYTLARQQMSQPGGMIAFELKGGIGAGRR 327 (398)
T ss_dssp CHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEEEC----------------CCTTEEEEEETTHHHHHHH
T ss_pred CHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHhcCCCeeEEECCCCCCCcCHHHHHhhCCCCceEEEEEECCCHHHHHH
Confidence 7888888888888888899999999999999999988888888999999999888866555679999999964 355778
Q ss_pred HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 315 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 315 l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
+++++++.+...++|+..+++++|...++...+.+.+...|+.+++||+|++.++++++++.+.++|+++
T Consensus 328 ~l~~~~i~~~~~s~G~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~g~~~~~~~i~~l~~al~~~ 397 (398)
T 1gc0_A 328 FMNALQLFSRAVSLGDAESLAQHPASMTHSSYTPEERAHYGISEGLVRLSVGLEDIDDLLADVQQALKAS 397 (398)
T ss_dssp HHHHCSSSEECSCCSCSSCEEECGGGTTTSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEeCcCCHHHHHHHHHHHHHhc
Confidence 8899988888889999999999999999988998888889998999999999999999999999999763
No 13
>2rfv_A Methionine gamma-lyase; pyridoxal-5'-phosphate, PLP-dependent enzyme; HET: LLP; 1.35A {Citrobacter freundii} PDB: 1y4i_A* 3jwa_A* 3jw9_A* 3jwb_A* 3mkj_A*
Probab=100.00 E-value=3.3e-42 Score=324.29 Aligned_cols=380 Identities=40% Similarity=0.680 Sum_probs=316.0
Q ss_pred CCCCccceeeccCCCCC-CCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEE
Q 016612 5 EEPGVSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALC 75 (386)
Q Consensus 5 ~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~ 75 (386)
.+.++++++++.|...+ ..+.+.+|++.++....+... ....+.|++.+.+..+++++++++++|.++.++
T Consensus 5 ~~~~~~t~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~g~~~~i~ 84 (398)
T 2rfv_A 5 RTYGFNTQIVHAGQQPDPSTGALSTPIFQTSTFVFDSAEQGAARFALEESGYIYTRLGNPTTDALEKKLAVLERGEAGLA 84 (398)
T ss_dssp GGSCHHHHHHHTTCCCCTTTCCSSCCCCCCSBCCCSSHHHHHHHC-----CCSBTTTCCHHHHHHHHHHHHHHTCSEEEE
T ss_pred ccCCCceeEeecCCcCccCCCCcCCCCcCCCccccCCHHHHHHhhcCCCCCCceeCCCChHHHHHHHHHHHHhCCCcEEE
Confidence 34467789999986533 478889999988877665432 134456666667789999999999999999999
Q ss_pred eCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcc
Q 016612 76 FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ 154 (386)
Q Consensus 76 ~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~ 154 (386)
+++|++|+. ++.+++++||+|++++|.|+++...+...++..|.+++.++..|++++++.+++++++|++++|+||||.
T Consensus 85 ~~sG~~a~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~i~~~~~~v~~~~~~nptG~ 164 (398)
T 2rfv_A 85 TASGISAITTTLLTLCQQGDHIVSASAIYGCTHAFLSHSMPKFGINVRFVDAAKPEEIRAAMRPETKVVYIETPANPTLS 164 (398)
T ss_dssp ESSHHHHHHHHHHHHCCTTCEEEEESSSCHHHHHHHHTHHHHTTCEEEEECTTSHHHHHHHCCTTEEEEEEESSBTTTTB
T ss_pred ECCHHHHHHHHHHHHhCCCCEEEEcCCCcccHHHHHHHHHHHcCCEEEEeCCCCHHHHHHhcCCCCeEEEEECCCCCCCc
Confidence 999999987 5566789999999999999998766655557889999999999999999999999999999999999999
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceE-EEEEEcChhHHHHHHHhhhhc-C
Q 016612 155 ICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMA-GVLAVKGERLAKELYFLQNAE-G 232 (386)
Q Consensus 155 ~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~-G~i~~~~~~~~~~~~~~~~~~-~ 232 (386)
+.|+++|.++|+++|+++|+|++|+.+....+...+.|+++.|+||++++++ .|. |+++++++.+.+.+....... +
T Consensus 165 ~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~g-~~~~G~~~~~~~~~~~~~~~~~~~~~~ 243 (398)
T 2rfv_A 165 LVDIETVAGIAHQQGALLVVDNTFMSPYCQQPLQLGADIVVHSVTKYINGHG-DVIGGIIVGKQEFIDQARFVGLKDITG 243 (398)
T ss_dssp CCCHHHHHHHHHHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSS-CCCCEEEEECHHHHHHHHHTHHHHTTC
T ss_pred ccCHHHHHHHHHHcCCEEEEECCCcccccCCchhhCCcEEEEeCcccccCCC-CceEEEEEECHHHHHHHHHHHHHhCCC
Confidence 9999999999999999999999999877665666789999999999997765 455 999987554443555555544 5
Q ss_pred CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHh
Q 016612 233 SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LAL 311 (386)
Q Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ 311 (386)
...++..++++..+++.+..+.++..++.+.+.+++++.+.+..+.++++++++++.++.+..++.+++++|.+++ ...
T Consensus 244 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~l~~~~~v~~~~~~~L~~~p~~~~~~~~~~~~g~~~~~~~~~~~~~ 323 (398)
T 2rfv_A 244 GCMSPFNAWLTLRGVKTLGIRMERHCENALKIARFLEGHPSITRVYYPGLSSHPQYELGQRQMSLPGGIISFEIAGGLEA 323 (398)
T ss_dssp CCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEETTHHHH
T ss_pred CCCCHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhhCCCCceEEEEEEcCCHHH
Confidence 5677788888888888888888888899999999999988788888999999999888865545678999999975 345
Q ss_pred HHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcCC
Q 016612 312 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 312 ~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~~ 385 (386)
...+++.++..++.+++|..++++.+|+...+..++.+.+...|..+++||+|++.++++++++.+.++|++++
T Consensus 324 ~~~l~~~~~~~~i~~~~G~~~~li~~~~~~~~~~~~~~~~~~~g~~~~~iRls~~~~~~~~~i~~l~~al~~~~ 397 (398)
T 2rfv_A 324 GRRMINSVELCLLAVSLGDTETLIQHPASMTHSPVAPEERLKAGITDGLIRLSVGLEDPEDIINDLEHAIRKAT 397 (398)
T ss_dssp HHHHHTTCSSSEECSCCSSSSCEEECHHHHTSSSSCHHHHHHTTCCTTEEEEECCSSCHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhCCcceeccCCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEecCCCHHHHHHHHHHHHHhhc
Confidence 77899999999999999999998888888777777777777778888999999999999999999999998653
No 14
>2ctz_A O-acetyl-L-homoserine sulfhydrylase; crystal, O-acetyl homoserine sulfhydrase, structural genomic structural genomics/proteomics initiative; HET: PLP; 2.60A {Thermus thermophilus} SCOP: c.67.1.3
Probab=100.00 E-value=7.1e-42 Score=323.90 Aligned_cols=374 Identities=33% Similarity=0.491 Sum_probs=309.9
Q ss_pred ccceeeccCCCCC-CCCCcccceeeeeeeecCCCC--------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcH
Q 016612 9 VSTLLMNFSNEFD-PYGALSTPLYQTATFKQPSAT--------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSG 79 (386)
Q Consensus 9 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~--------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~g 79 (386)
++++.++.|...+ .+|.+.+|+++++++..++.. ....+.|++.+++...++++.+++++|.++.+++++|
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~v~~~sG 82 (421)
T 2ctz_A 3 FETLQLHAGYEPEPTTLSRQVPIYPTTSYVFKSPEHAANLFALKEFGNIYSRIMNPTVDVLEKRLAALEGGKAALATASG 82 (421)
T ss_dssp HHHHHHHTTCCCCTTTCBSSCCBCCCSCBCCSCHHHHHHHHTTTTGGGSCBTTBCHHHHHHHHHHHHHHTCSEEEEESSH
T ss_pred cceeeeeCCCCCCcCCCCccCCeeccceeeeCCHHHHHHhhccccCCCcccCCCChHHHHHHHHHHHHhCCCceEEecCH
Confidence 5678888886544 589999999999998876531 2335678887778899999999999999888999999
Q ss_pred HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe-CCCCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 80 MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV-NTCDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 80 t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v-~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
++|+. ++..++++||+|+++.+.|+++...+...++..|++++.+ +.+|++++++++++++++|++++++||+|.+.|
T Consensus 83 t~A~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~n~~G~~~~ 162 (421)
T 2ctz_A 83 HAAQFLALTTLAQAGDNIVSTPNLYGGTFNQFKVTLKRLGIEVRFTSREERPEEFLALTDEKTRAWWVESIGNPALNIPD 162 (421)
T ss_dssp HHHHHHHHHHHCCTTCEEEECSCCCHHHHHHHHTHHHHTTCEEEECCTTCCHHHHHHHCCTTEEEEEEESSCTTTCCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEEeCCCchHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHhhccCCeEEEEECCCCCCCcccC
Confidence 99987 4555789999999999999998776655567889999999 988999999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCEEEEeCCC-CCCCccCCCCCCccEEEeccccccccCCCceEEEEEEc-ChhH----HHHHH------
Q 016612 158 IRKIAEMAHAHGALLLVDNSI-MSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVK-GERL----AKELY------ 225 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~-~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~-~~~~----~~~~~------ 225 (386)
+++|.++|+++|+++|+|++| +.+....+...++|++++|+||+++++++..+|+++.+ +..+ .+.+.
T Consensus 163 l~~i~~~a~~~g~~livD~~~~~~g~~~~~~~~~~Di~~~s~~K~l~~~g~~~G~~~~~~~~~~~~~~~~~~l~~~~~g~ 242 (421)
T 2ctz_A 163 LEALAQAAREKGVALIVDNTFGMGGYLLRPLAWGAALVTHSLTKWVGGHGAVIAGAIVDGGNFPWEGGRYPLLTEPQPGY 242 (421)
T ss_dssp HHHHHHHHHHHTCEEEEECGGGGGGTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECSCSCCTTTTCHHHHSCBGGG
T ss_pred HHHHHHHHHHcCCEEEEECCcccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccchhhcccchhhhccccchh
Confidence 999999999999999999999 77765556667899999999999987654334555542 2111 01111
Q ss_pred -------------------H-hhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCC
Q 016612 226 -------------------F-LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 285 (386)
Q Consensus 226 -------------------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 285 (386)
. .....+..+++..+++...+++.+..+.++..++++.+.++|++++.+..+.++++...
T Consensus 243 ~g~~~~~~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~r~~~~~~~a~~l~~~L~~~p~v~~v~~p~~~~~ 322 (421)
T 2ctz_A 243 HGLRLTEAFGELAFIVKARVDGLRDQGQALGPFEAWVVLLGMETLSLRAERHVENTLHLAHWLLEQPQVAWVNYPGLPHH 322 (421)
T ss_dssp TTBCHHHHHGGGHHHHHHHHTHHHHHCCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHTCTTEEEEECTTSTTC
T ss_pred hhhhhhhhcchhHHHHHHHHHHHHhcCCCCCHHHHHHHHcCcchHHHHHHHHHHhHHHHHHHHHhCCCeeEEECCCCCCC
Confidence 0 01224557788888888888998888888888999999999999988777777888888
Q ss_pred Cchhhhhhcc-CCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEE
Q 016612 286 PGHELHYSQA-KGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRI 363 (386)
Q Consensus 286 ~~~~i~~~~~-~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRi 363 (386)
+.+.+..++. ++.+++++|.+.+ ......++++++..++..+.|+..+++.+|+..+|..++.+.+...|+.++.||+
T Consensus 323 ~~~~~~~~~~~~~~g~ivsf~l~~~~~~~~~~~~~l~~~~~~~~~G~~~sl~~~~~~~~h~~~~~~~~~~~g~~~~~vRl 402 (421)
T 2ctz_A 323 PHHDRAQKYFKGKPGAVLTFGLKGGYEAAKRFISRLKLISHLANVGDTRTLAIHPASTTHSQLSPEEQAQAGVSPEMVRL 402 (421)
T ss_dssp TTHHHHHHHHTTCCCSEEEEEETTHHHHHHHHHHTCSSSEECSCCCCSSCEEECGGGTTTTTSCHHHHHHHTCCTTEEEE
T ss_pred CCHHHHHHhccCCCceEEEEEeCCCHHHHHHHHHhCCcceecccCCCCCceeeCCcccccccCCHHHHHhcCCCCCeEEE
Confidence 8877765543 5689999999976 3568899999999999999999999999999999999999888899999999999
Q ss_pred EeccCChHHHHHHHHHHHh
Q 016612 364 SVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 364 s~~~~~~~~~i~~l~~~l~ 382 (386)
|++.++++++++.|+++|+
T Consensus 403 S~g~e~~~~li~~l~~al~ 421 (421)
T 2ctz_A 403 SVGLEHVEDLKAELKEALA 421 (421)
T ss_dssp ECCSSCHHHHHHHHHHHTC
T ss_pred EeCCCCHHHHHHHHHHHhC
Confidence 9999999999999999874
No 15
>1cs1_A CGS, protein (cystathionine gamma-synthase); lyase, LLP-dependent enzymes, methionine biosynthesis; HET: LLP DHD; 1.50A {Escherichia coli} SCOP: c.67.1.3
Probab=100.00 E-value=2e-41 Score=317.74 Aligned_cols=375 Identities=38% Similarity=0.584 Sum_probs=306.8
Q ss_pred CccceeeccCCCC-CCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHH-
Q 016612 8 GVSTLLMNFSNEF-DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAA- 85 (386)
Q Consensus 8 ~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~- 85 (386)
++++++++.|... +.+|.+.+|+++++.+...+......+.|++.+++...++++.++++++.++.+++++|++++..
T Consensus 4 ~~~t~~~~~~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~ 83 (386)
T 1cs1_A 4 KQATIAVRSGLNDDEQYGCVVPPIHLSSTYNFTGFNEPRAHDYSRRGNPTRDVVQRALAELEGGAGAVLTNTGMSAIHLV 83 (386)
T ss_dssp CHHHHHHHTTTTCCTTTCBSSCCBCCCSBBCCSBTTBCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHH
T ss_pred CcceeEEecCCCccccCCCCCCCccccceeeccccCCCCCcceeCCCCccHHHHHHHHHHHhCCCcEEEeCCHHHHHHHH
Confidence 4568889988543 45899999999999998765554456778777888899999999999998888999999999874
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHH
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMA 165 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la 165 (386)
+..++++||+|++++|.|+++...+...++..|.+++.++..|++++++.+++++++|++++|+||||.+.|+++|.++|
T Consensus 84 ~~~~~~~g~~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~ 163 (386)
T 1cs1_A 84 TTVFLKPGDLLVAPHDCYGGSYRLFDSLAKRGCYRVLFVDQGDEQALRAALAEKPKLVLVESPSNPLLRVVDIAKICHLA 163 (386)
T ss_dssp HHHHCCTTCEEEEETTCCHHHHHHHHHHHTTTSCEEEEECTTCHHHHHHHHHTCCSEEEEECSCTTTCCCCCHHHHHHHH
T ss_pred HHHHhCCCCEEEEecCCcHhHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhccCCcEEEEeCCCCCCCcccCHHHHHHHH
Confidence 55578999999999999998766665666788999999999999999999988999999999999999999999999999
Q ss_pred HHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 166 HAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
+++|+++|+|++|+.+....+...++|+++.|+||+++++++..+|+++++++++.+.+.......+...++..+++...
T Consensus 164 ~~~~~~li~De~~~~~~~~~~~~~~~di~~~s~sK~~~~~~~~~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~ 243 (386)
T 1cs1_A 164 REVGAVSVVDNTFLSPALQNPLALGADLVLHSCTKYLNGHSDVVAGVVIAKDPDVVTELAWWANNIGVTGGAFDSYLLLR 243 (386)
T ss_dssp HHTTCEEEEECTTTCTTTCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEESSHHHHHHHHHHHHHHTCBCCHHHHHHHHH
T ss_pred HHcCCEEEEECCCcccccCCccccCceEEEEcCcccccCCCCceeEEEEeCcHHHHHHHHHHHHhcCCCCCHHHHHHHHh
Confidence 99999999999998776655556789999999999997775533599999865676666655555455567777777667
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceec
Q 016612 246 GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 325 (386)
Q Consensus 246 ~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~ 325 (386)
+++.+..+.+...++.+.+.+++++.+.+....++++.+++++.++.+..++.+++++|.+.+. .+.+.+.+...|+.
T Consensus 244 ~l~~~~~~~~~~~~~~~~l~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~gi~ 321 (386)
T 1cs1_A 244 GLRTLVPRMELAQRNAQAIVKYLQTQPLVKKLYHPSLPENQGHEIAARQQKGFGAMLSFELDGD--EQTLRRFLGGLSLF 321 (386)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHTTCTTEEEEECTTSTTSTTHHHHHHHCSSCCSEEEEEESSC--HHHHHHHHHTCSSS
T ss_pred cccHHHHHHHHHHHHHHHHHHHHhcCCCeEEEECCCCCCCccHHHHHHhcCCCceEEEEEECCC--HHHHHHHHHhCCcc
Confidence 7777777888889999999999999887777788999999998888665566789999998642 23333334344555
Q ss_pred cC---CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 326 VS---FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 326 ~~---~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
++ +|+..++++.|....+...+...+...|..++++|+|++.++++++++.+.++|+++
T Consensus 322 ~~~~~~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~~~~~i~~l~~al~~~ 383 (386)
T 1cs1_A 322 TLAESLGGVESLISHAATMTHAGMAPEARAAAGISETLLRISTGIEDGEDLIADLENGFRAA 383 (386)
T ss_dssp EEBSCCCSSSCEEEEGGGTTTTTSCHHHHHHHTCCTTEEEEECCSSCHHHHHHHHHHHHHHH
T ss_pred eEcccCCCcceeeecccccccccCCHHHHHhcCCCCCeEEEEEccCCHHHHHHHHHHHHHHh
Confidence 44 787788888888877777777777777888899999999999999999999999764
No 16
>2cb1_A O-acetyl homoserine sulfhydrylase; PLP enzyme, lyase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: LLP; 2.0A {Thermus thermophilus}
Probab=100.00 E-value=3.5e-40 Score=311.69 Aligned_cols=373 Identities=32% Similarity=0.532 Sum_probs=304.8
Q ss_pred ccceeeccCCCCCCCCCcccceeeeeeeecCCCC-------CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHH
Q 016612 9 VSTLLMNFSNEFDPYGALSTPLYQTATFKQPSAT-------ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMA 81 (386)
Q Consensus 9 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~-------~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~ 81 (386)
++++.++.|...+.+|.+.+|+++++++..+... ....+.|++.+.+..+++++.+++++|.++.+++++|++
T Consensus 3 ~~t~~~~~~~~~~~~~~~~~pi~~s~~~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~l~~~la~~~g~~~~~~~~~gt~ 82 (412)
T 2cb1_A 3 YTTLAVLAGLPEDPHGAVGLPIYAVAAYGFKTLEEGQERFATGEGYVYARQKDPTAKALEERLKALEGALEAVVLASGQA 82 (412)
T ss_dssp HHHHHHHTTCCCCTTCCSSCCCCCCSBCCCSSHHHHHHHHHHCCSCSBTTTCCHHHHHHHHHHHHHHTCSEEEEESSHHH
T ss_pred ccceeeecCCCcCCCCCcCCCccccceeecCChHHHHHHhccccCcCcCCCCChHHHHHHHHHHHHhCCCcEEEECCHHH
Confidence 5678888885555689999999998777654321 234567887777889999999999999998999999999
Q ss_pred HHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHH
Q 016612 82 ALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 82 al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
|+.. +.+++++||+|+++.+.|+++...+...++..|.+++.++. |++++++++++++++|++++|+||+|.+.|+++
T Consensus 83 a~~~al~~l~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~~~~l~~~i~~~~~~v~~~~~~n~~G~~~~l~~ 161 (412)
T 2cb1_A 83 ATFAALLALLRPGDEVVAAKGLFGQTIGLFGQVLSLMGVTVRYVDP-EPEAVREALSAKTRAVFVETVANPALLVPDLEA 161 (412)
T ss_dssp HHHHHHHTTCCTTCEEEEETTCCHHHHHHHHHTTTTTTCEEEEECS-SHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHH
T ss_pred HHHHHHHHHhCCCCEEEEeCCCchhHHHHHHHHHHHcCCEEEEECC-CHHHHHHHhccCCeEEEEeCCCCCCcccccHHH
Confidence 9874 55578999999999999998876666667788999999987 499999999999999999999999999999999
Q ss_pred HHHHHHHcCCEEEEeCCCCCC-CccCCCCCCccEEEeccccccccCCCceEEEEEEcCh---------------------
Q 016612 161 IAEMAHAHGALLLVDNSIMSP-VLSRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------------- 218 (386)
Q Consensus 161 i~~la~~~~~~li~D~a~~~~-~~~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~--------------------- 218 (386)
|.++|+++|+++|+|++|+.+ ....+...+.|++++|+||++++|++..+|+++.+++
T Consensus 162 i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~di~~~S~~K~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 241 (412)
T 2cb1_A 162 LATLAEEAGVALVVDNTFGAAGALCRPLAWGAHVVVESLTKWASGHGSVLGGAVLSRETELWRNYPQFLQPDLKGQIPWE 241 (412)
T ss_dssp HHHHHHHHTCEEEEECGGGTTTTSCCGGGGTCSEEEEETTTTTTCSSCCCCEEEEECCCSGGGGSGGGGCC-------HH
T ss_pred HHHHHHHcCCEEEEECCCccccccCCccccCCeEEEECCcccccCCCCcEEEEEEeccccccccccccccccccccchhh
Confidence 999999999999999999877 4445556689999999999998776533444444423
Q ss_pred -----hHHHHHHHhh-hhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhh
Q 016612 219 -----RLAKELYFLQ-NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 292 (386)
Q Consensus 219 -----~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~ 292 (386)
++.+.++... ...+..+.+...++...+++.+..+.++..++.+.+.++|.+.+.+..+..+++...|.+....
T Consensus 242 ~~~~~~~~~~~r~~~~~~~g~~~~~~~a~~~~~~l~~l~~~~~~~~~~~~~l~~~L~~~~~v~~v~~p~~~~~p~~~~~~ 321 (412)
T 2cb1_A 242 ALRARCFPERVRTLGLSLCGMALSPFNAYLLFQGLETVALRVARMSETARFLAERLQGHPKVKALRYPGLPEDPAHRNAR 321 (412)
T ss_dssp HHGGGHHHHHHHHHHTTTTCCCCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHHTCTTCSEEECTTSTTCTTHHHHH
T ss_pred ccchHHHHHHHHHHHHHhcCCCCChHHhHHHHcCCchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHH
Confidence 2333333332 3334456777788877888888888888888999999999988777667778888888888777
Q ss_pred hccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHH
Q 016612 293 SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVND 372 (386)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~ 372 (386)
++.++.+++++|.+++.+...++++++++.. ..+.|+..+++.+|+...+..+++..+.+.|+.++.||+|++.+++++
T Consensus 322 ~~~~~~~~iv~~~~~~~~~~~~~l~~~~i~~-~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iR~s~g~~~~~~ 400 (412)
T 2cb1_A 322 KYLASGGPILTLDLGDLERASRFLGAIRLLK-AANLGDARTLLVHPWTTTHSRLKEEARLQAGVTPGLVRVSVGLEDPLD 400 (412)
T ss_dssp HHCSSSCSEEEEECSSHHHHHHHHHHCSSEE-CSCCSCSSCEEECTTTTTTTTSCHHHHHHTTCCTTEEEEECCSSCHHH
T ss_pred HhCCCCceEEEEEeCCHHHHHHHHHhCCeee-ecccCCCcceeecCcccccccCCHHHHHhcCCCCCeEEEEeccCCHHH
Confidence 6666788999999955556777888888777 788889999988998888888888888889998999999999999999
Q ss_pred HHHHHHHHHhc
Q 016612 373 LISDLDKALRT 383 (386)
Q Consensus 373 ~i~~l~~~l~~ 383 (386)
+++.+.++|++
T Consensus 401 ~i~~l~~al~~ 411 (412)
T 2cb1_A 401 LLALFEEALEA 411 (412)
T ss_dssp HHHHHHHHHHC
T ss_pred HHHHHHHHHhh
Confidence 99999999976
No 17
>1pff_A Methionine gamma-lyase; homocysteine; 2.50A {Trichomonas vaginalis} SCOP: c.67.1.3
Probab=100.00 E-value=7.7e-38 Score=287.23 Aligned_cols=325 Identities=41% Similarity=0.662 Sum_probs=266.4
Q ss_pred HHHHHHHhhcCCCceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC
Q 016612 59 ALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG 137 (386)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~ 137 (386)
++++.+++++|.++.+++++|++++.. +.+++++||+|++++|.|+++...+...++..|.+++.++..|++++++.++
T Consensus 2 ~l~~~la~~~g~~~~i~~~sG~~a~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~d~~~l~~~i~ 81 (331)
T 1pff_A 2 ALEGKIAKLEHAEACAATASGMGAIAASVWTFLKAGDHLISDDCLYGCTHALFEHQLRKFGVEVDFIDMAVPGNIEKHLK 81 (331)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHCCTTCEEEEESCCCHHHHHHHHTHHHHTTCEEEEECTTSTTHHHHTCC
T ss_pred hHHHHHHHHhCCCeEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcchHHHHHHHHHHhcCCEEEEeCCCCHHHHHHhhc
Confidence 678899999999999999999999875 4557899999999999999987665544566899999999889999999999
Q ss_pred CCceEEEEeCCCCCCcccccHHHHHHHHHH-cCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCce-EEEEEE
Q 016612 138 PWTKLVWVESPTNPRQQICDIRKIAEMAHA-HGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDVM-AGVLAV 215 (386)
Q Consensus 138 ~~~~~v~~~~~~nptG~~~~l~~i~~la~~-~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~~-~G~i~~ 215 (386)
+++++|++++|+||||.+.|+++|.++|++ +|+++|+|++|+.+....+...++|++++|+||++++|+ .| +|++++
T Consensus 82 ~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~d~~~~s~~K~~~~~~-~r~~G~~~~ 160 (331)
T 1pff_A 82 PNTRIVYFETPANPTLKVIDIEDAVKQARKQKDILVIVDNTFASPILTNPLDLGVDIVVHSATKYINGHT-DVVAGLVCS 160 (331)
T ss_dssp TTEEEEEEESSCTTTCCCCCHHHHHHHHTTSSSCEEEEECTTTHHHHCCGGGGTCSEEEEETTTTTSSSS-SCCCEEEEE
T ss_pred CCCeEEEEECCCCCcCcccCHHHHHHHHhhhcCCEEEEECCCcccccCChhhcCCcEEEEECccccCCCC-CceEEEEEe
Confidence 999999999999999999999999999999 999999999998776544446689999999999997765 45 799998
Q ss_pred cChhHHHHHHHhhhh-cCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhc
Q 016612 216 KGERLAKELYFLQNA-EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ 294 (386)
Q Consensus 216 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~ 294 (386)
+++++.+.+...... .+...++..++.+..+++.+..+.+...++.+.+.+++++++.+...+++++.+++++.++...
T Consensus 161 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~l~~~~~~~~~~~~ 240 (331)
T 1pff_A 161 RADIIAKVKSQGIKDITGAIISPHDAWLITRGTLTLDMRVKRAAENAQKVAEFLHEHKAVKKVYYPGLPDHPGHEIAKKQ 240 (331)
T ss_dssp CHHHHHHHHHTCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCEECTTSTTSTTHHHHHHH
T ss_pred CcHHHHHHHHHHHHhhcCCCCCHHHHHHHHcCcchHHHHHHHHHHHHHHHHHHHHcCCCeeEEECCCCCCCccHHHHHhh
Confidence 753676666665554 4556666666666666666667777888899999999998877778899999999998887665
Q ss_pred cCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHH
Q 016612 295 AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLI 374 (386)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i 374 (386)
.++.+++++|.+.+.+...+++++.++.....+.|+..+++.+|....+...+.+.+...|..++++|+|++.+++++++
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~l~~~gI~~~~~s~g~~~sl~~~~~~~~~~~~~~~~~~~~g~~~~~iRis~~~~~t~~~i 320 (331)
T 1pff_A 241 MKMFGSMIAFDVDGLEKAKKVLDNCHVVSLAVSLGGPESLIQHPASMTHAGVPKEEREAAGLTDNLIRLSVGCENVQDII 320 (331)
T ss_dssp CSSCCSEEEEECSSHHHHHHHHHTCSSSEECSSCCSSSCEEECHHHHTSTTSCHHHHHHTTCCTTEEEEECCSSCHHHHH
T ss_pred CCCCceEEEEEECCHHHHHHHHHhCCCceeccCCCCcceeeecchhhcccccCHHHHHhcCCCCCeEEEEEecCCHHHHH
Confidence 56678999999875544555555544433356678878888888777777777777777888889999999999999999
Q ss_pred HHHHHHHhcC
Q 016612 375 SDLDKALRTG 384 (386)
Q Consensus 375 ~~l~~~l~~~ 384 (386)
+.+.++|+++
T Consensus 321 ~~l~~~l~~~ 330 (331)
T 1pff_A 321 DDLKQALDLV 330 (331)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHHHh
Confidence 9999999864
No 18
>3nra_A Aspartate aminotransferase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: LLP; 2.15A {Rhodobacter sphaeroides}
Probab=99.97 E-value=7.4e-30 Score=240.63 Aligned_cols=325 Identities=18% Similarity=0.141 Sum_probs=220.7
Q ss_pred ceeeccCCCCCCCCC-cccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC-----CceEEeCcHHHH
Q 016612 11 TLLMNFSNEFDPYGA-LSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA-----DRALCFTSGMAA 82 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~~~i~~~~gt~a 82 (386)
..+++++ .+++.+. .++.+.++.... +.......|... |.+ +++++++++++++|. ++.+++++|+++
T Consensus 39 ~~~id~~-~g~~~~~~~~~~v~~a~~~~---~~~~~~~~y~~~~g~~~l~~~l~~~l~~~~g~~~~~~~~i~~~~g~~~a 114 (407)
T 3nra_A 39 GRPVDFS-HGDVDAHEPTPGAFDLFSAG---VQSGGVQAYTEYRGDLGIRDLLAPRLAAFTGAPVDARDGLIITPGTQGA 114 (407)
T ss_dssp SCCEETT-SCCTTTSCCCTTHHHHHHHH---HHHTHHHHSCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred Cceeeec-CcCCCCCCCcHHHHHHHHHH---HhcCCCCCcCCCCCCHHHHHHHHHHHHHHhCCCCCCCCcEEEeCCcHHH
Confidence 3478888 4455432 333333321111 111123357665 665 899999999999886 456666777799
Q ss_pred HHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-----------CCHHHHHhhhCCCceEEEEeCCCC
Q 016612 83 LAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------CDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 83 l~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
+.. +.+++++||+|++++|+|.++. ..++..|.+++.++. .|++++++.+++++++|++++|+|
T Consensus 115 ~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~n 190 (407)
T 3nra_A 115 LFLAVAATVARGDKVAIVQPDYFANR----KLVEFFEGEMVPVQLDYVSADETRAGLDLTGLEEAFKAGARVFLFSNPNN 190 (407)
T ss_dssp HHHHHHTTCCTTCEEEEEESCCTHHH----HHHHHTTCEEEEEEBCCCSSCCSSCCBCHHHHHHHHHTTCCEEEEESSCT
T ss_pred HHHHHHHhCCCCCEEEEcCCcccchH----HHHHHcCCEEEEeecccccccCcCCCcCHHHHHHHHhhCCcEEEEcCCCC
Confidence 875 4557899999999999999885 445577888888876 189999999988999999999999
Q ss_pred CCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----CC-----CCCCccEEEeccccccccCCCceEEEEEEcC
Q 016612 151 PRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKG 217 (386)
Q Consensus 151 ptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-----~~-----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~ 217 (386)
|||.+.+ +++|.++|++||+++|+|++|+...+. .. ...+.++++.|+||++ |.+|+|+|+++++
T Consensus 191 ptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~- 268 (407)
T 3nra_A 191 PAGVVYSAEEIGQIAALAARYGATVIADQLYSRLRYAGASYTHLRAEAAVDAENVVTIMGPSKTE-SLSGYRLGVAFGS- 268 (407)
T ss_dssp TTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCTTCCCCCGGGCTTSCGGGEEEEECSSSTT-CCGGGCCEEEEEC-
T ss_pred CCCcccCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCCChhhcCcccCCcEEEEeCccccc-CCCeeeEEEEEcC-
Confidence 9999998 999999999999999999999753321 11 1245679999999999 5457899999986
Q ss_pred hhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhh
Q 016612 218 ERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS 293 (386)
Q Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~ 293 (386)
+.+.+.+...........++..+.++...++. +..+.++..++.+.+.+.+++.+. +....
T Consensus 269 ~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~--------~~~~~------- 333 (407)
T 3nra_A 269 RAIIARMEKLQAIVSLRAAGYSQAVLRGWFDEAPGWMEDRIARHQAIRDELLHVLRGCEG--------VFART------- 333 (407)
T ss_dssp HHHHHHHHHHHHHHTSSSCHHHHGGGGGTTCCCTTHHHHHHHHHHHHHHHHHHHHHTSTT--------CBCCC-------
T ss_pred HHHHHHHHHHHhhhccCCChHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcCCC--------ceecc-------
Confidence 55666665555544445555555555554432 455556666667777777765431 11110
Q ss_pred ccCCCCceEEEEeCC-HHhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CC
Q 016612 294 QAKGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--ED 369 (386)
Q Consensus 294 ~~~~~~~~~~~~~~~-~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~ 369 (386)
...+.++++.++. ......+.+.+. ..|+.+.+|..+. ...++++|||++. ++
T Consensus 334 --~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------------------~~~~~~iRis~~~~~~~ 390 (407)
T 3nra_A 334 --PQAGSYLFPRLPKLAVAPAEFVKILRLQAGVVVTPGTEFS---------------------PHTADSVRLNFSQDHEA 390 (407)
T ss_dssp --CSBSSEECCBCCCBSSCHHHHHHHHHHHHCEECEEGGGTC---------------------TTCTTBEEEECCSCHHH
T ss_pred --CCeeEEEEEeCCCCCCCHHHHHHHHHHhCCEEEeCchhhC---------------------CCCCCEEEEEeCCCHHH
Confidence 1123555555543 233556666664 3588777765422 0136789999974 66
Q ss_pred hHHHHHHHHHHHhc
Q 016612 370 VNDLISDLDKALRT 383 (386)
Q Consensus 370 ~~~~i~~l~~~l~~ 383 (386)
++++++.|++++++
T Consensus 391 i~~~~~~l~~~~~~ 404 (407)
T 3nra_A 391 AVAAARRIVTLVER 404 (407)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77788888888765
No 19
>3tqx_A 2-amino-3-ketobutyrate coenzyme A ligase; energy metabolism, transferase; HET: PLP; 2.30A {Coxiella burnetii}
Probab=99.97 E-value=2.5e-29 Score=236.28 Aligned_cols=284 Identities=15% Similarity=0.145 Sum_probs=209.7
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHH
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVA 133 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 133 (386)
+...++++.+++++|.++.+++++|++++. ++.+++++||.|++++|.|+++. ..++..|.+++.++..|+++++
T Consensus 88 ~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~~l~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l~ 163 (399)
T 3tqx_A 88 TIHKELEKDISEFLGTDDTILYSSCFDANGGLFETLLGPEDAIISDELNHASII----DGIRLCKAQRYRYKNNAMGDLE 163 (399)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHH----HHHHSCCSEEEEECTTCTTHHH
T ss_pred hHHHHHHHHHHHHHCCCcEEEECchHHHHHHHHHHhcCCCCEEEECCcccHHHH----HHHHHcCCceeEeCCCCHHHHH
Confidence 478999999999999999999999998876 56668899999999999999885 4556789999999988999999
Q ss_pred hhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC-------C--CCCccEEEecc
Q 016612 134 SAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-------L--ELGADIVMHSA 198 (386)
Q Consensus 134 ~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-------~--~~~~di~~~S~ 198 (386)
+.+++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+..... . ..+.|++++|+
T Consensus 164 ~~l~~~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~di~~~s~ 243 (399)
T 3tqx_A 164 AKLKEADEKGARFKLIATDGVFSMDGIIADLKSICDLADKYNALVMVDDSHAVGFIGENGRGTPEYCGVADRVDILTGTL 243 (399)
T ss_dssp HHHHHHHTTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSSTTSCCHHHHHTCTTCCSEEEEES
T ss_pred HHHHhhhccCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEECCccccccCCCCCchHHhhCCCCCCcEEEecc
Confidence 88874 899999999999999999999999999999999999999975543211 1 12679999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhh--hcCCCCChhhHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHhhCC
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
||+++|++ +|++++++ ++.+.+..... ......++....++...++. .....++..++.+.+.+.+++..
T Consensus 244 sK~~~g~~---gG~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~g 319 (399)
T 3tqx_A 244 GKALGGAS---GGYTSGHK-EIIEWLRNRSRPYLFSNTVAPVIVATSLKVLELLKTEGPQLRKQLQENSRYFRAGMEKLG 319 (399)
T ss_dssp SSSSCSSC---CEEEEECH-HHHHHHHHHCHHHHSSCCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred hHhcccCc---eEEEEcCH-HHHHHHHHhCcceeccCCCcHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 99997454 59999874 45554544321 22334555555554444432 23444555566666666666431
Q ss_pred CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 273 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
++ +. ...++++++.+++.....++.+.+...|+.+.++.... .
T Consensus 320 ---------~~------~~----~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~------~------------ 362 (399)
T 3tqx_A 320 ---------FQ------LV----PGNHPIIPVMLGDAQLATNMADHLLQEGIYVVGFSYPV------V------------ 362 (399)
T ss_dssp ---------CC------BC----CCSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTT------S------------
T ss_pred ---------CC------cC----CCCCCEEEEEeCCHHHHHHHHHHHHHCCCEEeeeCCCC------C------------
Confidence 11 11 23578889988776667788888888888776543210 0
Q ss_pred hcCCCCCeEEEEec----cCChHHHHHHHHHHHhcCC
Q 016612 353 ARGLTEDLVRISVG----IEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 353 ~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~~ 385 (386)
...++++|++++ .++++++++.|++++++.+
T Consensus 363 --~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 397 (399)
T 3tqx_A 363 --PMGKARIRVQMSAVHTQQQLDRAIEAFGQVGKKLG 397 (399)
T ss_dssp --CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred --CCCCceEEEEeecCCCHHHHHHHHHHHHHHHHHhc
Confidence 113568999996 3788889999999888764
No 20
>3dzz_A Putative pyridoxal 5'-phosphate-dependent C-S LYA; putative PLP-dependent aminotransferase; HET: MSE LLP PG4; 1.61A {Lactobacillus delbrueckii subsp} SCOP: c.67.1.0
Probab=99.97 E-value=7e-29 Score=232.62 Aligned_cols=296 Identities=16% Similarity=0.185 Sum_probs=205.5
Q ss_pred CccccCCCCchHHHHHHHHHhhcC--C--CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 46 PYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 46 ~~~y~~~g~~~~~~l~~~l~~~~g--~--~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
.+.|.+...++++++++++++.+| . ++.+++++|++++. ++.+++++||+|++++|+|+++. ..++..|.+
T Consensus 57 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~ 132 (391)
T 3dzz_A 57 AFGYESVPAEYYKAVADWEEIEHRARPKEDWCVFASGVVPAISAMVRQFTSPGDQILVQEPVYNMFY----SVIEGNGRR 132 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHSCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCHHHH----HHHHHTTCE
T ss_pred cCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECCCHHHHHHHHHHHhCCCCCeEEECCCCcHHHH----HHHHHcCCE
Confidence 445655533588999999999887 2 35666666789987 55667899999999999999885 445578899
Q ss_pred EEEeCC--------CCHHHHHhhhC-CCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 121 VKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 121 ~~~v~~--------~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
++.++. .|+++++++++ +++++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.....
T Consensus 133 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 212 (391)
T 3dzz_A 133 VISSDLIYENSKYSVNWADLEEKLATPSVRMMVFCNPHNPIGYAWSEEEVKRIAELCAKHQVLLISDEIHGDLVLTDEDI 212 (391)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTSTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCC
T ss_pred EEEeeeeecCCceeecHHHHHHHHhccCceEEEEECCCCCCCcccCHHHHHHHHHHHHHCCCEEEEecccccccCCCCCc
Confidence 998887 48999999998 7999999999999999994 6899999999999999999998743321
Q ss_pred -CCCCCC---cc--EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcC-CCCChhhHHHHHhcCCc----HHHH
Q 016612 185 -RPLELG---AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGVKT----MALR 253 (386)
Q Consensus 185 -~~~~~~---~d--i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~ 253 (386)
.....+ .| +++.|+||++ |.+|+|+|+++++++++.+.+.......+ ...+...+.++...+.. +...
T Consensus 213 ~~~~~~~~~~~d~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 291 (391)
T 3dzz_A 213 TPAFTVDWDAKNWVVSLISPSKTF-NLAALHAACAIIPNPDLRARAEESFFLAGIGEPNLLAIPAAIAAYEEGHDWLREL 291 (391)
T ss_dssp CCGGGSCTTTGGGEEEEECSHHHH-TCTTTCCEEEECCSHHHHHHHHHHHHHHTCSSCCTTHHHHHHHHHHHCHHHHHHH
T ss_pred eehhhcCccccCcEEEEEeChhhc-cccchhheEEEECCHHHHHHHHHHHHhhccCCCCHHHHHHHHHHHhccHHHHHHH
Confidence 111211 44 9999999999 55678999999986777766655543222 23444444443333322 3444
Q ss_pred HHHHHHHHHHHHHHHhh-CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcC-cceeccCCCC
Q 016612 254 VEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTK-YFSITVSFGS 330 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~-~~gi~~~~G~ 330 (386)
.+...++.+.+.+.+++ .+.+ .++ . ...+.++++.++.. .....+.+.+. ..|+.+++|.
T Consensus 292 ~~~~~~~~~~l~~~l~~~~~~~--------------~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 354 (391)
T 3dzz_A 292 KQVLRDNFAYAREFLAKEVPEV--------------KVL--D-SNASYLAWVDISALGMNAEDFCKYLREKTGLIISAGN 354 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTS--------------EEC--C-CCBSSEEEEECGGGCSCHHHHHHHHHHHHCEECEESG
T ss_pred HHHHHHHHHHHHHHHHhhCCCc--------------EEe--c-cCceEEEEEehhhcCCCHHHHHHHHHHhCCEEEeCch
Confidence 55556666667777765 3321 111 0 11234445666432 24667777773 7789888776
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
.+.. ..++++|||++. +++++.++.|.+++++.
T Consensus 355 ~~~~---------------------~~~~~iRis~~~~~~~i~~~l~~l~~~l~~~ 389 (391)
T 3dzz_A 355 GYRG---------------------NGHEFVRINLACPKELVIDGMQRLKQGVLNL 389 (391)
T ss_dssp GGCT---------------------TGGGEEEEECCSCHHHHHHHHHHHHHHHHTC
T ss_pred hhCC---------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 5220 125779999973 67788888888888764
No 21
>3a2b_A Serine palmitoyltransferase; vitamin B6-dependent enzyme fold type I, acyltransferase, PY phosphate; HET: PLP; 2.30A {Sphingobacterium multivorum}
Probab=99.97 E-value=1.3e-28 Score=231.58 Aligned_cols=290 Identities=16% Similarity=0.194 Sum_probs=208.1
Q ss_pred cccCC-CC-chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 48 DYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 48 ~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
.|... |. ++++++++++++++|.++.+++++|++++. ++.+++++||.|++++|.|+++. ..++..|.+++.+
T Consensus 79 ~~~~~~g~~~~~~~l~~~la~~~g~~~v~~~~ggt~a~~~~~~~~~~~gd~V~~~~p~~~~~~----~~~~~~g~~~~~v 154 (398)
T 3a2b_A 79 GSRFLNGTLDIHVELEEKLSAYVGKEAAILFSTGFQSNLGPLSCLMGRNDYILLDERDHASII----DGSRLSFSKVIKY 154 (398)
T ss_dssp SBTTTTCCCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHSSCTTCEEEEETTCCHHHH----HHHHHSSSEEEEE
T ss_pred CcCcccCCcHHHHHHHHHHHHHhCCCcEEEECCHHHHHHHHHHHHhCCCCEEEECCccCHHHH----HHHHHcCCceEEe
Confidence 34443 55 489999999999999988888999999987 45567899999999999999886 3455679999999
Q ss_pred CCCCHHHHHhhhCC----CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----CCCC-----CCc
Q 016612 125 NTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE-----LGA 191 (386)
Q Consensus 125 ~~~d~~~l~~~~~~----~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----~~~~-----~~~ 191 (386)
+..|++++++.+++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.+. .... .+.
T Consensus 155 ~~~d~~~l~~~l~~~~~~~~~~v~~~~~~nptG~~~~~~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~ 234 (398)
T 3a2b_A 155 GHNNMEDLRAKLSRLPEDSAKLICTDGIFSMEGDIVNLPELTSIANEFDAAVMVDDAHSLGVIGHKGAGTASHFGLNDDV 234 (398)
T ss_dssp CTTCHHHHHHHHHTSCSSSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGC
T ss_pred CCCCHHHHHHHHHhhccCCceEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCCcccccCCCCCchHhhcCCCcCC
Confidence 99899999998875 7999999999999999999999999999999999999999866431 1111 125
Q ss_pred cEEEeccccccccCCCceEEEEEEcChhHHHHHHHh-h-hhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHH
Q 016612 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-Q-NAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAE 266 (386)
Q Consensus 192 di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~ 266 (386)
|++++|+||+++ ++| ||++++ +++.+.+... . .......++.+.+++...++.. ....+...++.+.+.+
T Consensus 235 di~~~s~sK~~~-~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~~~~l~~ 309 (398)
T 3a2b_A 235 DLIMGTFSKSLA-SLG---GFVAGD-ADVIDFLKHNARSVMFSASMTPASVASTLKALEIIQNEPEHIEKLWKNTDYAKA 309 (398)
T ss_dssp SEEEEESSSTTC-SSC---EEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHHCTHHHHHHHHHHHHHHH
T ss_pred eEEEeccccccc-CCC---cEEEeC-HHHHHHHHHhcccceecCCCCHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHH
Confidence 899999999995 555 899886 5565555443 2 2223334444443333333322 2334445556666666
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCC
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 346 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~ 346 (386)
.|++.. ++ +. .+.+.++++.+++......+.+.+...|+.+.+|..+. .|
T Consensus 310 ~L~~~g---------~~------~~----~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~---~~-------- 359 (398)
T 3a2b_A 310 QLLDHG---------FD------LG----ATESPILPIFIRSNEKTFWVTKMLQDDGVFVNPVVSPA---VP-------- 359 (398)
T ss_dssp HHHHTT---------CC------BC----SCCSSEEEEECCCHHHHHHHHHHHHHTTEECEEECTTT---SC--------
T ss_pred HHHhcC---------CC------cC----CCCCCEEEEEcCCHHHHHHHHHHHHHCCcEEEeeCCCC---CC--------
Confidence 665431 11 11 12367888888765556778888877788877765421 00
Q ss_pred CHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcCC
Q 016612 347 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTGP 385 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~~ 385 (386)
..++++||+++. ++++++++.|++++++..
T Consensus 360 ---------~~~~~iRis~~~~~~~e~i~~~~~~l~~~l~~~~ 393 (398)
T 3a2b_A 360 ---------AEESLIRFSLMATHTYDQIDEAIEKMVKVFKQAE 393 (398)
T ss_dssp ---------GGGCEEEEECCTTCCHHHHHHHHHHHHHHHHHCC
T ss_pred ---------CCCceEEEEEeCCCCHHHHHHHHHHHHHHHHHhC
Confidence 025679999973 778888888888887654
No 22
>3kax_A Aminotransferase, classes I and II; PLP, C-S lyase, transf structural genomics, center for structural genomics of INFE diseases, csgid; HET: LLP MSE PLP; 1.70A {Bacillus anthracis str} PDB: 3t32_A*
Probab=99.97 E-value=2.6e-28 Score=228.06 Aligned_cols=322 Identities=15% Similarity=0.170 Sum_probs=216.1
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcC--C--CceEEeCcHHHHHH-H
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA-A 85 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g--~--~~~i~~~~gt~al~-~ 85 (386)
..+++++.++..++ .++.+.++..... ....+.|+....++++++++++++.+| . ++.+++++|++++. +
T Consensus 24 ~~~i~l~~~~~~~~-~~~~v~~a~~~~~----~~~~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~ 98 (383)
T 3kax_A 24 EELIHAWIADMDFE-VPQPIQTALKKRI----EHPIFGYTLPPENIGDIICNWTKKQYNWDIQKEWIVFSAGIVPALSTS 98 (383)
T ss_dssp SCCEECCCSSCSSC-CCHHHHHHHHHHH----HSCCCCCCCCCTTHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHH
T ss_pred CCeeecccccCCCC-CCHHHHHHHHHHH----hcCCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHH
Confidence 35677774443343 3333333211111 123445655544689999999999987 3 25667777789987 5
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC--------CCHHHHHhhhCCCceEEEEeCCCCCCccccc
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~ 157 (386)
+..++++||+|++++|+|+++. ..++..|.+++.++. .|++++++.+++++++|++++|+||||.+.|
T Consensus 99 ~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~ 174 (383)
T 3kax_A 99 IQAFTKENESVLVQPPIYPPFF----EMVTTNNRQLCVSPLQKQNDTYAIDFEHLEKQFQQGVKLMLLCSPHNPIGRVWK 174 (383)
T ss_dssp HHHHCCTTCEEEECSSCCHHHH----HHHHHTTCEEEECCCEEETTEEECCHHHHHHHHTTTCCEEEEESSBTTTTBCCC
T ss_pred HHHhCCCCCEEEEcCCCcHHHH----HHHHHcCCEEEeccceecCCcEEEcHHHHHHHhCcCCeEEEEeCCCCCCCcCcC
Confidence 5667899999999999998885 445678899998886 3899999999889999999999999999986
Q ss_pred ---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCC-----CCccEEEeccccccccCCCceEEEEEEcChhHHHHH
Q 016612 158 ---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (386)
Q Consensus 158 ---l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~-----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~ 224 (386)
+++|.++|+++|+++|+|++|+..... .... .+.++++.|+||++ +++|+|+|+++++++++.+.+
T Consensus 175 ~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~ 253 (383)
T 3kax_A 175 KEELTKLGSLCTKYNVIVVADEIHSDIIYADHTHTPFASLSEELAARTITCMAPSKTF-NIAGLQASIIIIPNEKLRQAF 253 (383)
T ss_dssp HHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCEEEEEccccccccCCCCceeHhhcCccccCcEEEEEEChhhc-cCcchhheEEEeCCHHHHHHH
Confidence 667777799999999999998753321 1111 14569999999999 556789999998667777666
Q ss_pred HHhhhhcCC-CCChhhHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHhh-CCCcceEecCCCCCCCchhhhhhccCCC
Q 016612 225 YFLQNAEGS-GLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGA 298 (386)
Q Consensus 225 ~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~ 298 (386)
.......+. ..+...+.++...++. +....+...++.+.+.+.+++ .+. + .+. ...
T Consensus 254 ~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~--------~------~~~----~~~ 315 (383)
T 3kax_A 254 TSIQYRQGFHGLNIFAYTAMQSAYTECNDWLNEIRFYIEDNAKFACEYIKDHIPT--------L------SVM----KPE 315 (383)
T ss_dssp HHHHHHTTCCCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHHHHCTT--------C------EEC----CCS
T ss_pred HHHHhhcccCCCCHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHhhCCC--------c------eEe----cCC
Confidence 655544333 5566666666555554 334445555666666666665 321 1 111 112
Q ss_pred Cce-EEEEeCCH-HhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHH
Q 016612 299 GSV-LSFLTGSL-ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDL 373 (386)
Q Consensus 299 ~~~-~~~~~~~~-~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~ 373 (386)
+++ +++.++.. .....+.+.+. ..|+.+++|..+. ...++++|+|++. +++++.
T Consensus 316 ~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~---------------------~~~~~~iRi~~~~~~~~i~~~ 374 (383)
T 3kax_A 316 GSFLLWIDCSALNLSQDERTKLLEEKGKIIVEPGEKYG---------------------LGGEEHIGINIGCPRSVLEEI 374 (383)
T ss_dssp BSSEEEEECGGGCCCHHHHHHHHHHTSCEECEESGGGC---------------------TTCTTEEEEECSSCHHHHHHH
T ss_pred ceEEEEEEccccCCCHHHHHHHHHhhCCEEeECchhhc---------------------CCCCCeEEEEEcCCHHHHHHH
Confidence 333 44666432 24667777775 6789888776522 0136789999974 556666
Q ss_pred HHHHHHHH
Q 016612 374 ISDLDKAL 381 (386)
Q Consensus 374 i~~l~~~l 381 (386)
++.|++++
T Consensus 375 l~~l~~~l 382 (383)
T 3kax_A 375 LNRLRHTF 382 (383)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 66666655
No 23
>3ffh_A Histidinol-phosphate aminotransferase; APC88260, listeria in CLIP11262, structural genomics, PSI-2; 2.31A {Listeria innocua} SCOP: c.67.1.0
Probab=99.97 E-value=1.2e-28 Score=228.76 Aligned_cols=274 Identities=15% Similarity=0.204 Sum_probs=197.1
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
...++++.+++++|.+ +.+++++|++++.+ +.+++++||+|++++|+|+++. ..++..|.+++.++.+
T Consensus 68 ~~~~lr~~la~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~ 143 (363)
T 3ffh_A 68 WASSLRKEVADFYQLEEEELIFTAGVDELIELLTRVLLDTTTNTVMATPTFVQYR----QNALIEGAEVREIPLLQDGEH 143 (363)
T ss_dssp -CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCSTTCEEEEEESSCHHHH----HHHHHHTCEEEEEECCTTSCC
T ss_pred chHHHHHHHHHHhCCChhhEEEeCCHHHHHHHHHHHHccCCCEEEEcCCChHHHH----HHHHHcCCEEEEecCCCCCCc
Confidence 4567888888888864 56677777899874 5557899999999999998875 4456678999999876
Q ss_pred CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCc-------cCCCCCCccEEEecc
Q 016612 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVL-------SRPLELGADIVMHSA 198 (386)
Q Consensus 128 d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~-------~~~~~~~~di~~~S~ 198 (386)
|++++++.+++++++|++++|+||||.+.|++++.++++.+ |+++|+|++|+.... ......+.++++.|+
T Consensus 144 d~~~l~~~i~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 223 (363)
T 3ffh_A 144 DLEGMLNAIDEKTTIVWICNPNNPTGNYIELADIQAFLDRVPSDVLVVLDEAYIEYVTPQPEKHEKLVRTYKNLIITRTF 223 (363)
T ss_dssp CHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHTTSCTTSEEEEECTTGGGCSSCCCCCGGGGGTCTTEEEEEES
T ss_pred CHHHHHHhcccCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCcEEEEeCchHhhcCccccCHHHHhhcCCCEEEEeec
Confidence 99999999999999999999999999999999999999887 999999999973221 111123567999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC---cHHHHHHHHHHHHHHHHHHHhhCCCcc
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
||++ |++|+|+|+++++ +++.+.+..... ....+...++++...++ .+....++..++.+.+.+.+++...
T Consensus 224 sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~g-- 297 (363)
T 3ffh_A 224 SKIY-GLASARVGYGIAD-KEIIRQLNIVRP--PFNTTSIGQKLAIEAIKDQAFIGECRTSNANGIKQYEAFAKRFEK-- 297 (363)
T ss_dssp SSTT-CCSSCCCEEEEEC-HHHHHHHHHTCC--SCCCBHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCTT--
T ss_pred hhhh-cCchhceeeeecC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhhCCC--
Confidence 9999 5568899999995 556665655443 23456666665555443 2334445555666666666665321
Q ss_pred eEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 276 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 276 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
+ .++ +..+.++++.++. ....+.+.+...|+.+++|..+.
T Consensus 298 ------~------~~~----~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~~g~~~~---------------------- 337 (363)
T 3ffh_A 298 ------V------KLY----PANGNFVLIDLGI--EAGTIFSYLEKNGYITRSGAALG---------------------- 337 (363)
T ss_dssp ------C------EEC----CCCSSEEEEECSS--CHHHHHHHHHHTTEECEETTTTT----------------------
T ss_pred ------c------eEC----CCCCeEEEEECCC--CHHHHHHHHHHCCeEEEeCccCC----------------------
Confidence 1 111 2246778888864 35667777777788877766421
Q ss_pred CCCCeEEEEecc-CChHHHHHHHHHH
Q 016612 356 LTEDLVRISVGI-EDVNDLISDLDKA 380 (386)
Q Consensus 356 ~~~~~iRis~~~-~~~~~~i~~l~~~ 380 (386)
.++++|+|++. ++++++++.|+++
T Consensus 338 -~~~~iRis~~~~~~i~~~~~~l~~~ 362 (363)
T 3ffh_A 338 -FPTAVRITIGKEEDNSAVIALLEKL 362 (363)
T ss_dssp -CTTEEEEECCCHHHHHHHHHHHHHH
T ss_pred -CCCeEEEECCCHHHHHHHHHHHHHh
Confidence 15679999973 5667777777654
No 24
>3i16_A Aluminum resistance protein; YP_878183.1, carbon-sulfur lyase involved in aluminum resist structural genomics; HET: MSE TLA PLP; 2.00A {Clostridium novyi} PDB: 3gwp_A*
Probab=99.97 E-value=1.2e-28 Score=231.46 Aligned_cols=256 Identities=18% Similarity=0.187 Sum_probs=205.6
Q ss_pred hHHHHHHHHHhhcCCCceEE---eCcHHHHHH-HHHHhcCCCCEEEecC-CCCCcHHHHH-------hhhcccCCcEEEE
Q 016612 56 TRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLL-------SRVTPKTGVVVKR 123 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~---~~~gt~al~-~~~~~~~~g~~Vlv~~-~~~~~~~~~~-------~~~~~~~g~~~~~ 123 (386)
.++++++.+++++|.+..++ ++||++|+. ++.++++|||+|++++ +.|+++...+ ...++..|++++.
T Consensus 74 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~ 153 (427)
T 3i16_A 74 GRDSLDAVYARVFNTESALVRPHFVNGTHALGAALFGNLRPGNTMLSVCGEPYDTLHDVIGITENSNMGSLKEFGINYKQ 153 (427)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHHCCTTCEEEESSSSCCGGGHHHHTCSCCCSSCCTGGGTCEEEE
T ss_pred HHHHHHHHHHHHhCCcceEEeCCCccHHHHHHHHHHHHhCCCCEEEEeCCCccHHHHHHHhccccchHHHHHHcCCEEEE
Confidence 58899999999999998888 899999986 5667899999999999 9998886554 1456678999999
Q ss_pred eCC-----CCHHHHHhhhC--CCceEEEEeC----CCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCC-ccCCCCC
Q 016612 124 VNT-----CDLDEVASAIG--PWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLEL 189 (386)
Q Consensus 124 v~~-----~d~~~l~~~~~--~~~~~v~~~~----~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~-~~~~~~~ 189 (386)
++. .|+++++++++ +++++|++++ |+||+|.+.|+++|.++|++ +|+++++|++|+.+. ...+...
T Consensus 154 v~~~~~g~~D~e~l~~~l~~~~~tklV~i~~s~~~p~nptg~i~dl~~i~~la~~~~~g~~livD~a~~~~~~~~~p~~~ 233 (427)
T 3i16_A 154 VDLKEDGKPNLEEIEKVLKEDESITLVHIQRSTGYGWRRALLIEDIKSIVDCVKNIRKDIICFVDNCYGEFMDTKEPTDV 233 (427)
T ss_dssp CCCCTTSSCCHHHHHHHHHTCTTEEEEEEECSCCSSSSCCCCHHHHHHHHHHHHHHCTTSEEEEECTTTTTSSSSCGGGG
T ss_pred ecCccCCCcCHHHHHHHhhCCCCCEEEEEEcCCCCCCCCcccHHHHHHHHHHHHHhCCCCEEEEECCCccccccCCcccc
Confidence 997 59999999998 8999999999 99999999999999999999 999999999999877 4566677
Q ss_pred CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh--hcCCCCCh-hh-HHHHHhcCCcHHHHHHHHHHHHHHHH
Q 016612 190 GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAP-FD-CWICLRGVKTMALRVEKQQDNAQKIA 265 (386)
Q Consensus 190 ~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~--~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~l~ 265 (386)
++|++++|+||+++|+...++|+++++ +++.+.+..... ..+....+ .. ++++++++..+..|.++..+++..+.
T Consensus 234 gaDiv~~S~sK~lgg~g~~~gG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~l~gl~~~~~r~~~~~~~a~~la 312 (427)
T 3i16_A 234 GADLIAGSLIKNIGGGIAPTGGYLAGT-KDCIEKTSYRLTVPGIGGECGSTFGVVRSMYQGLFLAPHISMEALKGAILCS 312 (427)
T ss_dssp TCSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEecCcccCCCCCCceEEEEEEC-HHHHHHHHHhcccCccCccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999999999977544668999987 556665655322 22222222 33 67778888888999999999999999
Q ss_pred HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceecc
Q 016612 266 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITV 326 (386)
Q Consensus 266 ~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~ 326 (386)
++|++++. .+ +++ .+.+.+ .-+++|.+++.+...++++.+.......
T Consensus 313 ~~L~~~g~--~V-~p~-~~~~~~----------~~i~~i~l~~~~~~~~f~~~l~~~~~~~ 359 (427)
T 3i16_A 313 RIMELAGF--EV-MPK-YDEKRS----------DIIQSIKFNDKDKLIEFCKGIQTGSPID 359 (427)
T ss_dssp HHHHHTTC--EE-ESC-TTSCCS----------SSCEEEECSSHHHHHHHHHHHHHTCSSS
T ss_pred HHHHhCCC--ee-cCC-CCCCCc----------cEEEEEEECCHHHHHHHHHHHhhcCccc
Confidence 99998863 23 444 333322 2378999988888889999988776543
No 25
>1b5p_A Protein (aspartate aminotransferase); pyridoxal enzyme; HET: PLP; 1.80A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1gck_A* 1b5o_A* 5bj4_A* 1gc4_A* 1gc3_A* 1bkg_A* 5bj3_A* 1bjw_A*
Probab=99.97 E-value=1.5e-28 Score=230.14 Aligned_cols=289 Identities=19% Similarity=0.245 Sum_probs=193.6
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
..|... |.+ +++++.+++.+.+|. ++.+++++|++++.+ +.+++++||+|+++.|+|+++. ..++..|.
T Consensus 62 ~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~ 137 (385)
T 1b5p_A 62 TKYAPPAGIPELREALAEKFRRENGLSVTPEETIVTVGGSQALFNLFQAILDPGDEVIVLSPYWVSYP----EMVRFAGG 137 (385)
T ss_dssp CSCCCTTCCHHHHHHHHHHHHHTTCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCChHHEEEcCChHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHcCC
Confidence 457665 665 788888888877664 245556666799974 5557899999999999998885 44557788
Q ss_pred EEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----C
Q 016612 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (386)
Q Consensus 120 ~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~ 185 (386)
+++.++.+ |++++++++++++++|++++|+||||.+++ +++|.++|+++|++||+|++|+...+. +
T Consensus 138 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~ 217 (385)
T 1b5p_A 138 VVVEVETLPEEGFVPDPERVRRAITPRTKALVVNSPNNPTGAVYPKEVLEALARLAVEHDFYLVSDEIYEHLLYEGEHFS 217 (385)
T ss_dssp EEEEEECCGGGTTCCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCC
T ss_pred EEEEeecCcccCCCCCHHHHHHhcCCCCEEEEEeCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCC
Confidence 98888763 789999999888999999999999999976 899999999999999999998754331 1
Q ss_pred CCCC--CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-------HHHHHHH
Q 016612 186 PLEL--GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MALRVEK 256 (386)
Q Consensus 186 ~~~~--~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~ 256 (386)
.... +.++++.|+||++ |++|+|+||++++ +.+.+.+.........+.+...+.++...++. +....+.
T Consensus 218 ~~~~~~~~~i~~~s~SK~~-~~~G~RiG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 295 (385)
T 1b5p_A 218 PGRVAPEHTLTVNGAAKAF-AMTGWRIGYACGP-KEVIKAMASVSRQSTTSPDTIAQWATLEALTNQEASRAFVEMAREA 295 (385)
T ss_dssp GGGTCTTTEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEEechhhc-CCcccceEEEEeC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhCCCcchHHHHHHHHH
Confidence 1222 6789999999999 5568999999986 55666565555444445566555555444432 2223334
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLI 335 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~ 335 (386)
+.++.+.+.+.+++. ++. +. . ...+.++++.+.. .....++.+.+...|+.+.+|..+.
T Consensus 296 ~~~~~~~l~~~L~~~---------g~~------~~--~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~gv~v~~g~~f~-- 355 (385)
T 1b5p_A 296 YRRRRDLLLEGLTAL---------GLK------AV--R-PSGAFYVLMDTSPIAPDEVRAAERLLEAGVAVVPGTDFA-- 355 (385)
T ss_dssp HHHHHHHHHHHHHHH---------TCC------BC--C-CSBTTEEEEECTTTCSSHHHHHHHHHHTTEECEESGGGT--
T ss_pred HHHHHHHHHHHHHHC---------CCe------ec--C-CCeeEEEEEecCCCCCCHHHHHHHHHHCCeEEecccccC--
Confidence 444445555555532 111 11 0 1113345555541 1235567777767788887776421
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
.++++|||++. +++++.++.|.++++
T Consensus 356 ---------------------~~~~iRis~~~~~~~i~~~l~~l~~~l~ 383 (385)
T 1b5p_A 356 ---------------------AFGHVRLSYATSEENLRKALERFARVLG 383 (385)
T ss_dssp ---------------------CTTEEEEECCSCHHHHHHHHHHGGGGC-
T ss_pred ---------------------CCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 14679999983 334444444444443
No 26
>3hvy_A Cystathionine beta-lyase family protein, YNBB B.S ortholog; NP_348457.1, putative cystathionine beta-lyase involved in A resistance; HET: LLP MSE; 2.00A {Clostridium acetobutylicum}
Probab=99.97 E-value=4e-28 Score=227.86 Aligned_cols=255 Identities=18% Similarity=0.182 Sum_probs=204.4
Q ss_pred hHHHHHHHHHhhcCCCceEE---eCcHHHHHH-HHHHhcCCCCEEEecC-CCCCcHHHHH-------hhhcccCCcEEEE
Q 016612 56 TRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLL-------SRVTPKTGVVVKR 123 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~---~~~gt~al~-~~~~~~~~g~~Vlv~~-~~~~~~~~~~-------~~~~~~~g~~~~~ 123 (386)
.++++++.+++++|.+..++ ++||++|+. ++.++++|||+|++++ +.|+++...+ ...++..|++++.
T Consensus 75 g~~~Le~~lA~l~g~e~alv~p~~~sGt~A~~~al~all~pGD~Vl~~~~~~y~~~~~~~g~~~~~~~~~l~~~G~~~~~ 154 (427)
T 3hvy_A 75 GRDSLDRVYANIFNTESAFVRPHFVNGTHAIGAALFGNLRPNDTMMSICGMPYDTLHDIIGMDDSKKVGSLREYGVKYKM 154 (427)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTCCSHHHHHHHHHHHTCCTTCEEEECSSSCCGGGHHHHTCCTTCCSCCTGGGTCEEEE
T ss_pred hHHHHHHHHHHHhCCCceEEeCCCCcHHHHHHHHHHHhcCCCCEEEEeCCCCchhHHHHhccccchhhhHHHHcCCEEEE
Confidence 48899999999999998888 899999986 5667899999999998 9998886444 1456678999999
Q ss_pred eCC----CCHHHHHhhhC--CCceEEEEeC----CCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCC-ccCCCCCC
Q 016612 124 VNT----CDLDEVASAIG--PWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLELG 190 (386)
Q Consensus 124 v~~----~d~~~l~~~~~--~~~~~v~~~~----~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~-~~~~~~~~ 190 (386)
++. .|+++++++++ +++++|++++ |+||+|.+.|+++|.++|++ +|+++++|++|+.+. ...+...+
T Consensus 155 v~~~~~~~d~e~l~~~i~~~~~tklV~i~~s~gyp~nptg~v~dl~~i~~ia~~~~~g~~livD~a~~~~~~~~~p~~~g 234 (427)
T 3hvy_A 155 VDLKDGKVDINTVKEELKKDDSIKLIHIQRSTGYGWRKSLRIAEIAEIIKSIREVNENVIVFVDNCYGEFVEEKEPTDVG 234 (427)
T ss_dssp CCCBTTBCCHHHHHHHHHHCTTEEEEEEESSCCSSSSCCCCHHHHHHHHHHHHHHCSSSEEEEECTTCTTTSSSCGGGGT
T ss_pred ecCCCCCcCHHHHHHHhhCCCCCEEEEEECCCCCCCCccccHHHHHHHHHHHHHhCCCCEEEEECCccccccCCCCcccC
Confidence 998 69999999998 8999999999 99999999999999999999 899999999998887 45667778
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhc--C--CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE--G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 266 (386)
+|++++|+||+++|+...++|+++++ +++.+.+....... + .+.+...++++.+++..+..+.++..+++..+.+
T Consensus 235 aDiv~~S~sK~lgg~g~~~GG~i~~~-~~li~~l~~~~~~~~~g~~~~~~~~~a~~~~~gl~~~~~r~~~~~~~a~~la~ 313 (427)
T 3hvy_A 235 ADIIAGSLIKNIGGGIATTGGYIAGK-EEYVTQATFRVTVPGIGGECGSTFGVMRSLYEGLFMAPHVTIEAVKGAVFCAR 313 (427)
T ss_dssp CSEEEEETTSGGGTTTCCSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEECCcccccccccceEEEEEEC-HHHHHHHHHHhhcCCcccccCCCHHHHHHHHHhHhHHHHHHHHHHHHHHHHHH
Confidence 99999999999977544568999986 55666665533222 1 1222334677778888888899999999999999
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceec
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 325 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~ 325 (386)
++++++. .+ +++ ++.++ ...++++.+++.+...++++.+......
T Consensus 314 ~L~~~g~--~V-~p~-~~~~~----------~~li~~~~l~~~~~~~~f~~~l~~~~~~ 358 (427)
T 3hvy_A 314 IMELAGF--DV-LPK-YNDKR----------TDIIQAIKFNDEKKLIDFIKGIQTASPV 358 (427)
T ss_dssp HHHHTTC--EE-ESC-TTSCC----------SSSEEEEECSSHHHHHHHHHHHHHTCSS
T ss_pred HHHhCCC--ee-cCC-CCCCC----------ceEEEEEeCCCHHHHHHHHHHhcccccc
Confidence 9998763 22 444 33322 2338899998888888999988876543
No 27
>1fc4_A 2-amino-3-ketobutyrate conenzyme A ligase; 2-amino-3-ketobutyrate COA ligase, pyridoxal phosphate, COEN transferase, structural genomics; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.4
Probab=99.97 E-value=1.3e-28 Score=231.72 Aligned_cols=285 Identities=15% Similarity=0.162 Sum_probs=208.7
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHH
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEV 132 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l 132 (386)
.+...++++.+++++|.++.+++++|++++. ++..++++||.|+++.|.|+++. ..++..|.+++.++..|++++
T Consensus 89 ~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~~~~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~d~~~l 164 (401)
T 1fc4_A 89 QDSHKELEQKLAAFLGMEDAILYSSCFDANGGLFETLLGAEDAIISDALNHASII----DGVRLCKAKRYRYANNDMQEL 164 (401)
T ss_dssp BHHHHHHHHHHHHHHTCSEEEEESCHHHHHHTTHHHHCCTTCEEEEETTCCHHHH----HHHHTSCSEEEEECTTCHHHH
T ss_pred cHHHHHHHHHHHHHhCCCcEEEeCChHHHHHHHHHHHcCCCCEEEEcchhHHHHH----HHHHHcCCceEEECCCCHHHH
Confidence 3578899999999999988899999998876 56667899999999999998775 345678999999998899999
Q ss_pred HhhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc---------CCCCCCccEEEec
Q 016612 133 ASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---------RPLELGADIVMHS 197 (386)
Q Consensus 133 ~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~---------~~~~~~~di~~~S 197 (386)
++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+... .....+.|++++|
T Consensus 165 ~~~l~~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~De~~~~g~~~~~g~~~~~~~~~~~~~di~~~s 244 (401)
T 1fc4_A 165 EARLKEAREAGARHVLIATDGVFSMDGVIANLKGVCDLADKYDALVMVDDSHAVGFVGENGRGSHEYCDVMGRVDIITGT 244 (401)
T ss_dssp HHHHHHHHHTTCSSEEEEEESEETTTTEECCHHHHHHHHHHTTEEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEE
T ss_pred HHHHHHhhccCCCceEEEEeCCcCCCCCCCCHHHHHHHHHHcCCEEEEECcccccccCCCCCccHHHcCCCcCCcEEEec
Confidence 988864 7999999999999999999999999999999999999999754431 1112357999999
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHhh--hhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCC
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
+||+++++. +|+++++ +++.+.+.... .......++..++++..+++.+ ....++..++.+.+.+.+++..
T Consensus 245 ~sK~~~~~~---gG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g 320 (401)
T 1fc4_A 245 LGKALGGAS---GGYTAAR-KEVVEWLRQRSRPYLFSNSLAPAIVAASIKVLEMVEAGSELRDRLWANARQFREQMSAAG 320 (401)
T ss_dssp SSSTTCSSS---CEEEEEC-HHHHHHHHHHCHHHHHSCCCCHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred chhhccCCC---CEEEEcC-HHHHHHHHHhCcCceeCCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC
Confidence 999995544 4999886 55655554432 2223455666666655544433 2445556666666777766541
Q ss_pred CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 273 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
++ ++ ...++++++.+++......+.+.+...|+.+.+|..+. .|
T Consensus 321 ---------~~------~~----~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~---~~-------------- 364 (401)
T 1fc4_A 321 ---------FT------LA----GADHAIIPVMLGDAVVAQKFARELQKEGIYVTGFFYPV---VP-------------- 364 (401)
T ss_dssp ---------CC------BC----CSSSSEEEEEEECHHHHHHHHHHHHHTTEECCEECTTS---SC--------------
T ss_pred ---------Cc------cc----CCCCCEEEEEcCChHHHHHHHHHHHHCCcEEeeecCCC---CC--------------
Confidence 11 11 13578888888765556778888877788877665311 00
Q ss_pred hcCCCCCeEEEEecc----CChHHHHHHHHHHHhcCC
Q 016612 353 ARGLTEDLVRISVGI----EDVNDLISDLDKALRTGP 385 (386)
Q Consensus 353 ~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~~ 385 (386)
..++++||+++. ++++++++.|++++++..
T Consensus 365 ---~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~~ 398 (401)
T 1fc4_A 365 ---KGQARIRTQMSAAHTPEQITRAVEAFTRIGKQLG 398 (401)
T ss_dssp ---TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHTT
T ss_pred ---CCCceEEEEeCCCCCHHHHHHHHHHHHHHHHHhC
Confidence 124679999973 678888888888877653
No 28
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=99.97 E-value=2.4e-28 Score=227.45 Aligned_cols=288 Identities=14% Similarity=0.175 Sum_probs=201.4
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.+ +++++.+++.+.+|. ++.+++++|++++.+ +..++++||+|++++|+|+++. ..++..|
T Consensus 59 ~~~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g 134 (370)
T 2z61_A 59 KTHYTDSRGILELREKISELYKDKYKADIIPDNIIITGGSSLGLFFALSSIIDDGDEVLIQNPCYPCYK----NFIRFLG 134 (370)
T ss_dssp CCSCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCTHHH----HHHHHTT
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCChHHHHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcC
Confidence 3456655 554 677788777766552 357777777899874 5557899999999999999886 3455688
Q ss_pred cEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----CCC----CCC
Q 016612 119 VVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS----RPL----ELG 190 (386)
Q Consensus 119 ~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~----~~~----~~~ 190 (386)
.+++.++ .|++++++.+++++++|++++|+||||.+.|.+ |.++|+++|+++|+|++|+.+... +.. ..+
T Consensus 135 ~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~-l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~ 212 (370)
T 2z61_A 135 AKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLGEVIDRE-IYEFAYENIPYIISDEIYNGLVYEGKCYSAIEFDENLE 212 (370)
T ss_dssp CEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTCCCCCHH-HHHHHHHHCSEEEEECTTTTCBSSSCCCCGGGTCTTCS
T ss_pred CEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcCcccCHH-HHHHHHHcCCEEEEEcchhhcccCCCCcCHHHccCCCC
Confidence 9999998 799999999988899999999999999999999 999999999999999999864431 111 236
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-H----HHHHHHHHHHHHHHH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-M----ALRVEKQQDNAQKIA 265 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~----~~~~~~~~~~~~~l~ 265 (386)
.|++++|+||++ |++|+|+|++++++ ++.+.+...........+...+.++...++. . ....+...++.+.+.
T Consensus 213 ~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~ 290 (370)
T 2z61_A 213 KTILINGFSKLY-AMTGWRIGYVISND-EIIEAILKLQQNLFISAPTISQYAALKAFEKETEREINSMIKEFDRRRRLVL 290 (370)
T ss_dssp SEEEEEESTTTT-TCGGGCCEEEECCH-HHHHHHHHHHHHHTSSSCHHHHHHHGGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cEEEEecChhcc-CCccceEEEEEECH-HHHHHHHHHHhhcccCCCHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHH
Confidence 799999999999 55678999999875 5666666555544456677777777676664 1 222333444555555
Q ss_pred HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccccccccccccCC
Q 016612 266 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHA 344 (386)
Q Consensus 266 ~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~ 344 (386)
+.+++.. +. +. . ...+.++++.++. ....+.+.+. .+|+.+.+|..+..
T Consensus 291 ~~L~~~g---------~~------~~--~-~~~~~~~~~~~~~--~~~~~~~~l~~~~gi~v~~g~~f~~---------- 340 (370)
T 2z61_A 291 KYVKDFG---------WE------VN--N-PIGAYYVFPNIGE--DGREFAYKLLKEKFVALTPGIGFGS---------- 340 (370)
T ss_dssp HHHHHTT---------CB------CC--C-CCBTTEECCBCSS--CHHHHHHHHHHHHCEECEEGGGGCG----------
T ss_pred HHHHHcC---------Ce------ec--C-CCcceEEEEecCC--CHHHHHHHHHHhCCEEEeCchhhCC----------
Confidence 5555431 11 11 0 1123445556654 3556777765 57888777654210
Q ss_pred CCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 345 SIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 345 ~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
..++++|||++. +++++.++.|+++++
T Consensus 341 -----------~~~~~~Ri~~~~~~~~i~~~~~~l~~~l~ 369 (370)
T 2z61_A 341 -----------KGKNYIRISYANSYENIKEGLERIKEFLN 369 (370)
T ss_dssp -----------GGSSBEEEECCSCHHHHHHHHHHHHHHHC
T ss_pred -----------CCCCEEEEEEeCCHHHHHHHHHHHHHHHh
Confidence 025679999973 556666777776664
No 29
>3jzl_A Putative cystathionine beta-lyase involved in ALU resistance; putative cystathionine beta-lyase involved in aluminum resis structural genomics; HET: LLP; 1.91A {Listeria monocytogenes str} PDB: 3fd0_A*
Probab=99.97 E-value=5.8e-28 Score=226.11 Aligned_cols=255 Identities=20% Similarity=0.205 Sum_probs=203.2
Q ss_pred hHHHHHHHHHhhcCCCceEE---eCcHHHHHH-HHHHhcCCCCEEEecC-CCCCcHHHHHh------hhcccCCcEEEEe
Q 016612 56 TRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVVKRV 124 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~---~~~gt~al~-~~~~~~~~g~~Vlv~~-~~~~~~~~~~~------~~~~~~g~~~~~v 124 (386)
.++++++.+++++|.+..++ ++||++|+. ++.++++|||+|++++ +.|.++...+. ..++..|++++.+
T Consensus 60 ~~~~Le~~lA~l~g~e~alv~p~~~sGt~Ai~~al~all~~GD~Vl~~~~~~y~~~~~~~~~~g~~~~~l~~~G~~~~~v 139 (409)
T 3jzl_A 60 GRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDELLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSV 139 (409)
T ss_dssp HHHHHHHHHHHHHTCSEEEEETTSCSHHHHHHHHHHHHCCTTCEEEECSSSCCTTHHHHHTSSSSSSSCTGGGTCEEEEC
T ss_pred HHHHHHHHHHHHhCCCcEEEECCCccHHHHHHHHHHHhcCCCCEEEEeCCCCcHhHHHHHhcccchhhHHHHcCCEEEEe
Confidence 58899999999999998888 889999987 5667899999999998 99998865442 4566789999999
Q ss_pred CC-----CCHHHHHhhhCCCceEEEEeC----CCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCC-ccCCCCCCcc
Q 016612 125 NT-----CDLDEVASAIGPWTKLVWVES----PTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPV-LSRPLELGAD 192 (386)
Q Consensus 125 ~~-----~d~~~l~~~~~~~~~~v~~~~----~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~-~~~~~~~~~d 192 (386)
+. .|++++++++++++++|++++ |+||+|.+.|+++|.++|++ +|+++++|++|+.+. ...+...++|
T Consensus 140 ~~~~~g~~d~e~l~~ai~~~tklV~i~~s~g~p~nptg~v~~l~~I~~la~~~~~~~~livD~a~~~~~~~~~p~~~g~D 219 (409)
T 3jzl_A 140 PLLENGDVDFPRIAKKMTPKTKMIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGAD 219 (409)
T ss_dssp CCCTTSCCCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTTSSCCSGGGTCS
T ss_pred CCCCCCCcCHHHHHHhccCCCeEEEEECCCCCCCCCcCccccHHHHHHHHHhhCCCCEEEEeCCcccccccCCccccCCe
Confidence 98 599999999999999999999 99999999999999999999 999999999998876 3456677899
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhc----CCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE----GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l 268 (386)
++++|+||+++|+...++|+++++ +++.+.+....... ..+......+++.++++.+..+.++..+++..+.++|
T Consensus 220 iv~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~g~~~~~~~~~l~gl~~~~~r~~~~~~~a~~la~~L 298 (409)
T 3jzl_A 220 IIAGSLIKNPGGGLAKTGGYIAGK-EALVDLCGYRLTTPGIGREAGASLYSLLEMYQGFFLAPHVTAQAIKGARFTAAML 298 (409)
T ss_dssp EEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTGGGCCCCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECccccCCccCCceEEEEEeC-HHHHHHHHHHhccccccccccccHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 999999999977654568999987 55666555433221 1222222345567778788889999999999999999
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceec
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSIT 325 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~ 325 (386)
++++. .+ +++ ++.++ ...++++.+++.+...++++.++.....
T Consensus 299 ~~~g~--~v-~p~-~~~~~----------~~~i~~i~l~~~~~~~~~~~~L~~~~~~ 341 (409)
T 3jzl_A 299 AEFGV--EA-DPV-WDAPR----------TDLIQSVSFHNKEKMVAFAQAIQAASPV 341 (409)
T ss_dssp HHTTC--EE-ESC-TTSCC----------SSSCCEEECSCHHHHHHHHHHHHHTSSS
T ss_pred HhCCC--cc-cCC-CCCCC----------ccEEEEEEeCCHHHHHHHHHHHHhcCcc
Confidence 98763 22 444 33322 2237888898888888999998877643
No 30
>3get_A Histidinol-phosphate aminotransferase; NP_281508.1, structural genomics, joint center for structural genomics; HET: LLP MSE; 2.01A {Campylobacter jejuni subsp}
Probab=99.96 E-value=8.1e-29 Score=230.16 Aligned_cols=311 Identities=14% Similarity=0.195 Sum_probs=214.2
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAA-VT 87 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~ 87 (386)
..+++++.+...++ .++.+.++..... .....|.... ..++++.+++++|.+ +.+++++|++++.+ +.
T Consensus 30 ~~~i~l~~~~~~~~-~~~~v~~a~~~~~-----~~~~~y~~~~---~~~lr~~la~~~~~~~~~v~~~~g~~~a~~~~~~ 100 (365)
T 3get_A 30 KEVIKLASNENPFG-TPPKAIECLRQNA-----NKAHLYPDDS---MIELKSTLAQKYKVQNENIIIGAGSDQVIEFAIH 100 (365)
T ss_dssp SCCEECSSCCCTTC-SCHHHHHHHHHHG-----GGTTSCCCTT---CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHH
T ss_pred CceEEecCCCCCCC-CCHHHHHHHHHHH-----HhhccCCCCC---hHHHHHHHHHHhCCCcceEEECCCHHHHHHHHHH
Confidence 35678885545555 3333333211111 1233444331 257888888888865 56677777899874 55
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-----CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
.++++||+|++++|+|+++. ..++..|.+++.++. .|++++++.+++++++|++++|+||||.+.|.+++.
T Consensus 101 ~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~ 176 (365)
T 3get_A 101 SKLNSKNAFLQAGVTFAMYE----IYAKQCGAKCYKTQSITHNLDEFKKLYETHKDEIKLIFLCLPNNPLGECLDASEAT 176 (365)
T ss_dssp HHCCTTCEEEECSSCCTHHH----HHHHHHTCEEEECSSSSCCHHHHHHHHHHTTTTEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HHhCCCCEEEEeCCChHHHH----HHHHHcCCEEEEEecCCCCCCCHHHHHHHhCCCCCEEEEcCCCCCCCCCcCHHHHH
Confidence 57899999999999999885 445567899999987 478899999999999999999999999999988888
Q ss_pred HHHH--HcCCEEEEeCCCCCCCc-------cCC----CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh
Q 016612 163 EMAH--AHGALLLVDNSIMSPVL-------SRP----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN 229 (386)
Q Consensus 163 ~la~--~~~~~li~D~a~~~~~~-------~~~----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~ 229 (386)
++++ ++|+++|+|++|+...+ ... ...+.+++++|+||++ |.+|+|+|+++++ +++.+.+.....
T Consensus 177 ~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~ 254 (365)
T 3get_A 177 EFIKGVNEDCLVVIDAAYNEFASFKDSKKHLEPCELIKEFDNVLYLGTFSKLY-GLGGLRIGYGIAN-ANIISAFYKLRA 254 (365)
T ss_dssp HHHHTSCTTSEEEEECTTHHHHHHHCGGGCCCHHHHHHHCTTEEEEEESSSTT-SCTTTCCEEEEEC-HHHHHHHHHHSC
T ss_pred HHHHhCCCCcEEEEeCccHHHhcccCCcccccHhHHhccCCCEEEEeecchHh-cCcchheEEEEcC-HHHHHHHHHhcC
Confidence 8887 67999999999873221 111 1236789999999999 5567899999995 566665655443
Q ss_pred hcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe
Q 016612 230 AEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 306 (386)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 306 (386)
. .+.+...+.++...++. +....++..++.+.+.+.+++.. +. ++ ...+.++++.+
T Consensus 255 ~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~g---------~~------~~----~~~~~~~~~~~ 313 (365)
T 3get_A 255 P--FNVSNLALKAAVAAMDDDEFTEKTLENNFSQMELYKEFAKKHN---------IK------II----DSYTNFITYFF 313 (365)
T ss_dssp T--TCSCHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTT---------CE------EC----CCSSSEEEEEC
T ss_pred C--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhCC---------CE------EC----CCCCeEEEEEC
Confidence 3 34566666665555543 34444555566666666666541 11 10 22456788888
Q ss_pred CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 016612 307 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALR 382 (386)
Q Consensus 307 ~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 382 (386)
+.. ....+.+.+...|+.+++|..+ + ++++|+|++. ++++++++.|+++++
T Consensus 314 ~~~-~~~~~~~~l~~~gi~v~~g~~~----------------------~--~~~iRis~~~~~~i~~l~~~l~~~l~ 365 (365)
T 3get_A 314 DEK-NSTDLSEKLLKKGIIIRNLKSY----------------------G--LNAIRITIGTSYENEKFFTEFDKILR 365 (365)
T ss_dssp SSS-CHHHHHHHHHTTTEECEECGGG----------------------T--CSEEEEECCCHHHHHHHHHHHHHHHC
T ss_pred CCC-CHHHHHHHHHHCCEEEEECccC----------------------C--CCEEEEEcCCHHHHHHHHHHHHHHhC
Confidence 653 4667777777788888776641 1 4679999974 778888888887763
No 31
>4dq6_A Putative pyridoxal phosphate-dependent transferas; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PLP; 1.50A {Clostridium difficile} PDB: 4dgt_A*
Probab=99.96 E-value=1.3e-28 Score=230.85 Aligned_cols=291 Identities=13% Similarity=0.169 Sum_probs=201.0
Q ss_pred CccccCCCCchHHHHHHHHHhhcC--C--CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 46 PYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 46 ~~~y~~~g~~~~~~l~~~l~~~~g--~--~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
.+.|+....++++++++++++.+| . ++.+++++|++++. ++..++++||+|+++.|+|+++. ..++..|.+
T Consensus 62 ~~~y~~~~~~~~~~l~~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~ 137 (391)
T 4dq6_A 62 IYGYTTRPDSYNESIVNWLYRRHNWKIKSEWLIYSPGVIPAISLLINELTKANDKIMIQEPVYSPFN----SVVKNNNRE 137 (391)
T ss_dssp CCCCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCEEEECSSCCTHHH----HHHHHTTCE
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCcHHHeEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCHHHH----HHHHHcCCe
Confidence 445555333589999999999988 3 35677777789987 55667899999999999999886 445578899
Q ss_pred EEEeCCC---------CHHHHHhhhCCCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 121 VKRVNTC---------DLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 121 ~~~v~~~---------d~~~l~~~~~~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
++.++.+ |++++++++++ +++|++++|+||||.+. ++++|.++|+++|+++|+|++|+.....
T Consensus 138 ~~~~~~~~~~~~~~~~d~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 216 (391)
T 4dq6_A 138 LIISPLQKLENGNYIMDYEDIENKIKD-VKLFILCNPHNPVGRVWTKDELKKLGDICLKHNVKIISDEIHSDIILKKHKH 216 (391)
T ss_dssp EEECCCEECTTSCEECCHHHHHHHCTT-EEEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC
T ss_pred EEeeeeeecCCCceEeeHHHHHHHhhc-CCEEEEECCCCCCCcCcCHHHHHHHHHHHHHcCCEEEeeccccccccCCCCc
Confidence 9988765 89999999988 99999999999999995 5889999999999999999999753321
Q ss_pred -CCCCC-----CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcC-CCCChhhHHHHHhcCCc----HHHH
Q 016612 185 -RPLEL-----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGVKT----MALR 253 (386)
Q Consensus 185 -~~~~~-----~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~ 253 (386)
..... +.++++.|+||++ |.+|+|+|+++++++++.+.+.......+ ...+...+.++...+.. +...
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 295 (391)
T 4dq6_A 217 IPMASISKEFEKNTITCMAPTKTF-NIAGLQSSYVVLPDEKDYKLLDDAFTRIDIKRNNCFSLVATEASYNNGESWLESF 295 (391)
T ss_dssp CCGGGSCHHHHHTEEEEECSHHHH-TCGGGCCEEEECCSHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred cCHHHcCccccCcEEEEEechhhc-cCcccceEEEEeCCHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhchHHHHHHH
Confidence 11122 3449999999999 55578999999987567666655543332 24455554444333322 3344
Q ss_pred HHHHHHHHHHHHHHHhh-CCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCC-HHhHHHHHhhcCcc-eeccCCC
Q 016612 254 VEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS-LALSKHVVETTKYF-SITVSFG 329 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~-~~~~~~l~~~l~~~-gi~~~~G 329 (386)
.+...++.+.+.+.+++ .+. + .++ ...++ ++++.++. ......+.+.+... |+.+++|
T Consensus 296 ~~~~~~~~~~l~~~l~~~~~~--------~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 357 (391)
T 4dq6_A 296 LEYLESNIDFAIKYINENMPK--------L------KVR----KPEGTYLLWVDFSALGLSDEELESILVQKGKVALNQG 357 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHCTT--------S------EEC----CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCEECEEG
T ss_pred HHHHHHHHHHHHHHHHhhCCC--------C------Eec----CCCccEEEEEEhhhcCCCHHHHHHHHHHhCCEEeeCc
Confidence 44555666666666665 221 1 111 11233 34466643 22466777777766 8888776
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHH
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKAL 381 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l 381 (386)
..+. ...++++|+|++. +++++.++.|++++
T Consensus 358 ~~~~---------------------~~~~~~iRis~~~~~~~i~~~l~~l~~~l 390 (391)
T 4dq6_A 358 NSFG---------------------IGGSGYQRINLACPRSMLEEALIRIKNAI 390 (391)
T ss_dssp GGGC---------------------TTCTTEEEEECCSCHHHHHHHHHHHHHHH
T ss_pred hhhC---------------------CCCCCeEEEEEcCCHHHHHHHHHHHHHHh
Confidence 6422 1135789999974 56677777777665
No 32
>3op7_A Aminotransferase class I and II; PLP-dependent transferase, structural genomics, joint center structural genomics, JCSG; HET: LLP UNL; 1.70A {Streptococcus suis 89} PDB: 3p6k_A*
Probab=99.96 E-value=1.3e-28 Score=229.66 Aligned_cols=291 Identities=16% Similarity=0.167 Sum_probs=202.5
Q ss_pred CCccccCC-CCchHHHHHHHHHhhcC---CCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 45 GPYDYTRS-GNPTRDALESLLAKLDK---ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 45 ~~~~y~~~-g~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
....|... |. .++++.++++++ .++.+++++|++|+. ++.+++++||+|+++.|.|+++. ..++..|.
T Consensus 55 ~~~~y~~~~g~---~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~ 127 (375)
T 3op7_A 55 TKLNYGWIEGS---PAFKKSVSQLYTGVKPEQILQTNGATGANLLVLYSLIEPGDHVISLYPTYQQLY----DIPKSLGA 127 (375)
T ss_dssp SCCSSCCTTCC---HHHHHHHHTTSSSCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESSCTHHH----HHHHHTTC
T ss_pred CCcCCCCCCCh---HHHHHHHHHHhccCChhhEEEcCChHHHHHHHHHHhcCCCCEEEEeCCCchhHH----HHHHHcCC
Confidence 34456554 43 467777777753 246777777789987 55668899999999999999886 44557788
Q ss_pred EEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccCC---
Q 016612 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSRP--- 186 (386)
Q Consensus 120 ~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~~--- 186 (386)
+++.++.+ |++++++++++++++|++++|+||||.+.| +++|.++|++||+++|+|++|+.......
T Consensus 128 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~la~~~~~~li~De~~~~~~~~~~~~~ 207 (375)
T 3op7_A 128 EVDLWQIEEENGWLPDLEKLRQLIRPTTKMICINNANNPTGAVMDRTYLEELVEIASEVGAYILSDEVYRSFSELDVPSI 207 (375)
T ss_dssp EEEEEEEEGGGTTEECHHHHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECCSCCCSSSCCCCH
T ss_pred EEEEEeccccCCCCCCHHHHHHhhccCCeEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccccccccCCCch
Confidence 88888753 899999999999999999999999999999 99999999999999999999876433210
Q ss_pred -CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHH----HHHHHHHH
Q 016612 187 -LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALR----VEKQQDNA 261 (386)
Q Consensus 187 -~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 261 (386)
...+.++++.|+||++ +.+|+|+|++++ ++++.+.+...........+...++++...++..... .+...++.
T Consensus 208 ~~~~~~~i~~~s~sK~~-~~~G~r~G~v~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 285 (375)
T 3op7_A 208 IEVYDKGIAVNSLSKTY-SLPGIRIGWVAA-NHQVTDILRDYRDYTMICAGVFDDLVAQLALAHYQEILERNRHILEENL 285 (375)
T ss_dssp HHHCTTEEEEEESSSSS-SCGGGCCEEEEC-CHHHHHHHTTTGGGTTSCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred hhhcCCEEEEeEChhhc-CCcccceEEEEe-CHHHHHHHHHHHhhhccCCCcHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 1135679999999999 445789999998 4667776665555545555666666555544433322 33335566
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhc-CcceeccCCCCcccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~~~~G~~~~~~~~p~~ 340 (386)
+.+.+.+++.+.+ .+. . ...+.+.++.++.......+.+.+ ...|+.+.+|..+.
T Consensus 286 ~~l~~~l~~~~~~--------------~~~--~-~~~~~~~~~~~~~~~~~~~~~~~ll~~~gi~v~~g~~~~------- 341 (375)
T 3op7_A 286 AILDQWIEEEPLV--------------SYI--R-PAVVSTSFVKIAVDMPMEDFCLQLLQEHGVLLVPGNRFE------- 341 (375)
T ss_dssp HHHHHHHHHCTTE--------------EEC--C-CSSSSCEEEEECCSSCHHHHHHHHHHHHCEECEEGGGGT-------
T ss_pred HHHHHHHhhCCCc--------------eEe--c-CCCeEEEeEEcCCCCCHHHHHHHHHHhCCEEEeChhhhC-------
Confidence 6666666654321 110 0 112334455554333355566655 56788777665421
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
.++++|++++. +++++.++.|.+++++.
T Consensus 342 ----------------~~~~iRi~~~~~~~~i~~~l~~l~~~l~~~ 371 (375)
T 3op7_A 342 ----------------RDGYVRLGFACEQETLIKGLEKLSQFLRRF 371 (375)
T ss_dssp ----------------CTTEEEECCCSCHHHHHHHHHHHHHHHGGG
T ss_pred ----------------CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 15679999974 57888899999888764
No 33
>1o4s_A Aspartate aminotransferase; TM1255, structural genomics, JCS protein structure initiative, joint center for structural G transferase; HET: PLP; 1.90A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.96 E-value=4.2e-28 Score=227.37 Aligned_cols=288 Identities=18% Similarity=0.206 Sum_probs=200.6
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
..|... |.+ +++++.+++.+.+|. ++.+++++|++++.+ +..++++||+|++++|+|+++. ..++..|.
T Consensus 72 ~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~v~~~~g~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~ 147 (389)
T 1o4s_A 72 VKYTDPRGIYELREGIAKRIGERYKKDISPDQVVVTNGAKQALFNAFMALLDPGDEVIVFSPVWVSYI----PQIILAGG 147 (389)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHTCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTC
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEecCHHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCC
Confidence 456655 554 677777777766664 256666667799874 5557899999999999999986 34456788
Q ss_pred EEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----C
Q 016612 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (386)
Q Consensus 120 ~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~ 185 (386)
+++.++.+ |++++++.+++++++|++++|+||||.+.| +++|.++|+++|+++|+|++|+.+... +
T Consensus 148 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~~~~g~~~~ 227 (389)
T 1o4s_A 148 TVNVVETFMSKNFQPSLEEVEGLLVGKTKAVLINSPNNPTGVVYRREFLEGLVRLAKKRNFYIISDEVYDSLVYTDEFTS 227 (389)
T ss_dssp EEEEEECCGGGTTCCCHHHHHHTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBCSSCCCC
T ss_pred EEEEEecCCccCCCCCHHHHHHhcccCceEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCC
Confidence 88888753 789999999889999999999999999987 999999999999999999999865432 1
Q ss_pred CC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-HHHHHHHHHHH
Q 016612 186 PL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-MALRVEKQQDN 260 (386)
Q Consensus 186 ~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 260 (386)
.. ..+.|++++|+||++ |++|+|+|+++++ +++.+.+.........+.+...+.++...++. +....+...++
T Consensus 228 ~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~l~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 305 (389)
T 1o4s_A 228 ILDVSEGFDRIVYINGFSKSH-SMTGWRVGYLISS-EKVATAVSKIQSHTTSCINTVAQYAALKALEVDNSYMVQTFKER 305 (389)
T ss_dssp HHHHCSSSTTEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHHHHHHHHTCSCCHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred HhhcCCCCCcEEEEeechhhc-CCcccceEEEEeC-HHHHHHHHHHhhhcccCCCHHHHHHHHHHHhccHHHHHHHHHHH
Confidence 11 136799999999999 5567899999986 45666565555444445566666555555443 34445566667
Q ss_pred HHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccccccccc
Q 016612 261 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 261 ~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~ 339 (386)
.+.+.+.+++.. +.-.+ +. .+.++++.++ ....++.+.+. ..|+.+.+|..+.
T Consensus 306 ~~~l~~~L~~~g---------~~~~~--------~~-~~~~~~~~~~--~~~~~l~~~l~~~~gi~v~~g~~f~------ 359 (389)
T 1o4s_A 306 KNFVVERLKKMG---------VKFVE--------PE-GAFYLFFKVR--GDDVKFCERLLEEKKVALVPGSAFL------ 359 (389)
T ss_dssp HHHHHHHHHHTT---------CCCCC--------CS-BSSEEEEECS--SCHHHHHHHHHHHHCEECEEGGGGT------
T ss_pred HHHHHHHHHhcC---------Ceeec--------CC-cceEEEEeCC--CCHHHHHHHHHHHCCEEEeCchhcC------
Confidence 777777776531 11110 11 2345566664 22456666664 6788777665321
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
.++++|+|++. +++++.++.|.+++++
T Consensus 360 -----------------~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (389)
T 1o4s_A 360 -----------------KPGFVRLSFATSIERLTEALDRIEDFLNS 388 (389)
T ss_dssp -----------------CTTEEEEECCSCHHHHHHHHHHHHHHHTC
T ss_pred -----------------CCCeEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 13579999974 5666777777776653
No 34
>2r2n_A Kynurenine/alpha-aminoadipate aminotransferase mitochondrial; alpha & beta protein, PLP-dependent transferase, aminotransf mitochondrion; HET: PMP KYN; 1.95A {Homo sapiens} PDB: 2qlr_A* 3dc1_A* 3ue8_A* 2vgz_A* 2xh1_A*
Probab=99.96 E-value=7.9e-28 Score=228.14 Aligned_cols=297 Identities=19% Similarity=0.220 Sum_probs=199.2
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCCC----------ceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhh
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKAD----------RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR 112 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~~----------~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~ 112 (386)
..|++. |.+ +++++.+++++.+|.+ +.|++++| ++++. ++..++++||+|++++|+|+++. .
T Consensus 72 ~~Y~~~~G~~~lr~~ia~~l~~~~g~~~~~~~~~~~~~~i~~t~G~~~al~~~~~~l~~~gd~Vlv~~p~y~~~~----~ 147 (425)
T 2r2n_A 72 LQYSPSAGIPELLSWLKQLQIKLHNPPTIHYPPSQGQMDLCVTSGSQQGLCKVFEMIINPGDNVLLDEPAYSGTL----Q 147 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHCCTTTTSCGGGTCEEEEEESSHHHHHHHHHHHHCCTTCEEEEESSCCHHHH----H
T ss_pred cCCCCCCCCHHHHHHHHHHHHHhcCCCCccccccCCcCcEEEeCcHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----H
Confidence 468777 886 8999999998887753 25555555 68987 45567899999999999998885 4
Q ss_pred hcccCCcEEEEeCCC----CHHHHHhhhC------------CCceEEEE-eCCCCCCccccc---HHHHHHHHHHcCCEE
Q 016612 113 VTPKTGVVVKRVNTC----DLDEVASAIG------------PWTKLVWV-ESPTNPRQQICD---IRKIAEMAHAHGALL 172 (386)
Q Consensus 113 ~~~~~g~~~~~v~~~----d~~~l~~~~~------------~~~~~v~~-~~~~nptG~~~~---l~~i~~la~~~~~~l 172 (386)
.++..|.+++.++.+ |++++++.++ +++++|++ ++|+||||.+.+ +++|.++|+++|++|
T Consensus 148 ~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~l 227 (425)
T 2r2n_A 148 SLHPLGCNIINVASDESGIVPDSLRDILSRWKPEDAKNPQKNTPKFLYTVPNGNNPTGNSLTSERKKEIYELARKYDFLI 227 (425)
T ss_dssp HHGGGTCEEEEECEETTEECHHHHHHHHTTSCSTTSSSTTSCCCSEEEECCSSCTTTCCCCCHHHHHHHHHHHHHTTCEE
T ss_pred HHHHcCCEEEEeCcCCCCCCHHHHHHHHHhhhccccccccCCCceEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEE
Confidence 556788999888863 7899998886 46888876 699999999997 459999999999999
Q ss_pred EEeCCCCCCCc-----cCCC---CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHH
Q 016612 173 LVDNSIMSPVL-----SRPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICL 244 (386)
Q Consensus 173 i~D~a~~~~~~-----~~~~---~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 244 (386)
|+||+|+...+ .+.. ..+.++++.|+||++ + +|+|+||+++++ .+.+.+...........+...+.++.
T Consensus 228 i~De~~~~~~~~g~~~~~~~~~~~~~~~i~~~s~SK~~-~-~GlRiG~~~~~~-~l~~~l~~~~~~~~~~~~~~~q~a~~ 304 (425)
T 2r2n_A 228 IEDDPYYFLQFNKFRVPTFLSMDVDGRVIRADSFSKII-S-SGLRIGFLTGPK-PLIERVILHIQVSTLHPSTFNQLMIS 304 (425)
T ss_dssp EEECTTGGGBSSSSCCCCTGGGCTTSCEEEEEESTTTT-C-STTCCEEEEEEH-HHHHHHHHHHHTTTCSSCHHHHHHHH
T ss_pred EEECCcccccCCCCCCCCccccCCCCCEEEEccchhhc-c-CccceEEEecCH-HHHHHHHHHHHHhcCCCCHHHHHHHH
Confidence 99999863211 1111 235679999999999 5 689999999974 56666655555444556666666655
Q ss_pred hcCCcH---------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHH-
Q 016612 245 RGVKTM---------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKH- 314 (386)
Q Consensus 245 ~~~~~~---------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~- 314 (386)
..++.. ....+.+.++.+.+.+.+++.- +++. .+. . +..+.++++.++.......
T Consensus 305 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-------~~~~-----~~~--~-p~~g~~~~~~~~~~~~~~~~ 369 (425)
T 2r2n_A 305 QLLHEWGEEGFMAHVDRVIDFYSNQKDAILAAADKWL-------TGLA-----EWH--V-PAAGMFLWIKVKGINDVKEL 369 (425)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-------SSSE-----EEC--C-CSBSSEEEEEETTCSCCHHH
T ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CCCe-----EEe--C-CCceEEEEEEeCCCCCHHHH
Confidence 544321 1122333344444445554420 1110 000 1 1235677788754222223
Q ss_pred HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhc
Q 016612 315 VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 383 (386)
Q Consensus 315 l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~ 383 (386)
+.+.+...|+.+.+|..+.. +. ...++++|||++ .+++++.++.|++++++
T Consensus 370 ~~~~l~~~gv~v~pg~~f~~---~~---------------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 423 (425)
T 2r2n_A 370 IEEKAVKMGVLMLPGNAFYV---DS---------------SAPSPYLRASFSSASPEQMDVAFQVLAQLIKE 423 (425)
T ss_dssp HHTHHHHTTEECEEGGGGSS---ST---------------TSCCCEEEEECSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHCCcEEechhhhcC---CC---------------CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 45666677888877765220 00 012578999986 37788888888888764
No 35
>3ly1_A Putative histidinol-phosphate aminotransferase; structural G joint center for structural genomics, JCSG; HET: MSE PLP CIT; 1.80A {Erwinia carotovora atroseptica}
Probab=99.96 E-value=9.6e-28 Score=221.94 Aligned_cols=277 Identities=13% Similarity=0.155 Sum_probs=203.3
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
+...++++.+++++|.+ +.+++++|++++.+ +..++++||+|++++|.|+++. ..++..|.+++.++.+
T Consensus 51 ~~~~~l~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~l~~~gd~vl~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~ 126 (354)
T 3ly1_A 51 NEILMLGNKLAAHHQVEAPSILLTAGSSEGIRAAIEAYASLEAQLVIPELTYGDGE----HFAKIAGMKVTKVKMLDNWA 126 (354)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSSCTHHH----HHHHHTTCEEEEECCCTTSC
T ss_pred CchHHHHHHHHHHhCCChHHEEEeCChHHHHHHHHHHHhCCCCeEEECCCCchHHH----HHHHHcCCEEEEecCCCCCC
Confidence 46789999999999865 56666666799875 4557799999999999999885 4556789999999876
Q ss_pred -CHHHHHhhhC--CCceEEEEeCCCCCCcccccHHHHHHHHHH--cCCEEEEeCCCCCCCcc----CC----CCC-CccE
Q 016612 128 -DLDEVASAIG--PWTKLVWVESPTNPRQQICDIRKIAEMAHA--HGALLLVDNSIMSPVLS----RP----LEL-GADI 193 (386)
Q Consensus 128 -d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~l~~i~~la~~--~~~~li~D~a~~~~~~~----~~----~~~-~~di 193 (386)
|++++++.++ +++++|++++|+||||.+.|.+++.++++. +|+++|+|++|+..... .. ... +.++
T Consensus 127 ~d~~~l~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i 206 (354)
T 3ly1_A 127 FDIEGLKAAVAAYSGPSIVYLVNPNNPTGTITPADVIEPWIASKPANTMFIVDEAYAEFVNDPRFRSISPMITQGAENII 206 (354)
T ss_dssp CCHHHHHHHHHTCSSCEEEEEESSCTTTCCCCCHHHHHHHHHTCCTTEEEEEECTTGGGCCCTTCCCSHHHHHTTCSSEE
T ss_pred CCHHHHHHHhccCCCCCEEEEeCCCCCcCCCcCHHHHHHHHHhCCCCeEEEEeccHHHhccccccCCHHHHhhhcCCCEE
Confidence 8999999998 799999999999999999998888888877 99999999998743322 11 122 6679
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhh
Q 016612 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 194 ~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~ 270 (386)
+++|+||++ |.+|+|+|+++++ +.+.+.+...... ...+...+.++...++. +..+.++..++.+.+.+.+++
T Consensus 207 ~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~ 282 (354)
T 3ly1_A 207 LLKTFSKIH-AMAGMRVGYAVAH-PTVIALMGRYVAG--EKINFSGVDAALASMNDSAFITYSKKSNDVSRQILLKALED 282 (354)
T ss_dssp EEEESSSTT-CCGGGCCEEEECC-HHHHHHHGGGTTC--SCCCHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeeChhhc-cChhhhheeeecC-HHHHHHHHHhcCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 5567899999985 5566655544433 45666666666666654 333444555566666666654
Q ss_pred CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHH
Q 016612 271 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 350 (386)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~ 350 (386)
.. +... +..+.++++.++. ...++.+.+..+|+.++ |....
T Consensus 283 ~~---------~~~~----------~~~~~~~~~~~~~--~~~~~~~~l~~~gi~v~-g~~~~----------------- 323 (354)
T 3ly1_A 283 LK---------LPYL----------PSEGNFVFHQLVV--PLKDYQTHMADAGVLIG-RAFPP----------------- 323 (354)
T ss_dssp HT---------CCBC----------CCCSSEEEEECSS--CHHHHHHHHHHTTEECC-CCCTT-----------------
T ss_pred CC---------CeEC----------CCCceEEEEECCC--CHHHHHHHHHHCCEEEe-ecCCC-----------------
Confidence 31 1111 2246778888864 35567777777788776 54310
Q ss_pred HHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhcC
Q 016612 351 RQARGLTEDLVRISVGI-EDVNDLISDLDKALRTG 384 (386)
Q Consensus 351 ~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~ 384 (386)
.++++|||++. ++++++++.|++++++.
T Consensus 324 ------~~~~iRis~~~~~~i~~~~~~l~~~l~~~ 352 (354)
T 3ly1_A 324 ------ADNWCRISLGTPQEMQWVADTMREFRKKS 352 (354)
T ss_dssp ------CTTEEEEECCCHHHHHHHHHHHHHHHHTT
T ss_pred ------CCCEEEEEcCCHHHHHHHHHHHHHHHHhh
Confidence 36779999974 78899999999988764
No 36
>1gd9_A Aspartate aminotransferase; pyridoxal enzyme, temperature dependence O substrate recognition; HET: PLP; 1.80A {Pyrococcus horikoshii} SCOP: c.67.1.1 PDB: 1gde_A* 1dju_A*
Probab=99.96 E-value=7.6e-29 Score=232.36 Aligned_cols=294 Identities=16% Similarity=0.174 Sum_probs=202.2
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----Cc-eEEeCcHHHHHHHH-HHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DR-ALCFTSGMAALAAV-THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~-~i~~~~gt~al~~~-~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
..|... |.+ +++++.+++.+.+|. ++ .+++++|++++.++ ..++++||+|++++|+|+++.. .++..|
T Consensus 57 ~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g 132 (389)
T 1gd9_A 57 THYGPNIGLLELREAIAEKLKKQNGIEADPKTEIMVLLGANQAFLMGLSAFLKDGEEVLIPTPAFVSYAP----AVILAG 132 (389)
T ss_dssp CSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSTTHHHHHHHTTTCCTTCEEEEEESCCTTHHH----HHHHHT
T ss_pred CCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCCeEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHCC
Confidence 456665 554 778888888776673 35 66777778999754 4467899999999999999864 445678
Q ss_pred cEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+...
T Consensus 133 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 212 (389)
T 1gd9_A 133 GKPVEVPTYEEDEFRLNVDELKKYVTDKTRALIINSPCNPTGAVLTKKDLEEIADFVVEHDLIVISDEVYEHFIYDDARH 212 (389)
T ss_dssp CEEEEEECCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTCCC
T ss_pred CEEEEeccCCccCCCCCHHHHHHhcCcCceEEEEECCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEehhhhhcccCCCCC
Confidence 888887742 789999999888999999999999999984 899999999999999999999865431
Q ss_pred -CCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH------HH
Q 016612 185 -RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA------LR 253 (386)
Q Consensus 185 -~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 253 (386)
.... .+.|+++.|+||++ |++|+|+|+++++ +.+.+.+...........+...+.++...++... ..
T Consensus 213 ~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 290 (389)
T 1gd9_A 213 YSIASLDGMFERTITVNGFSKTF-AMTGWRLGFVAAP-SWIIERMVKFQMYNATCPVTFIQYAAAKALKDERSWKAVEEM 290 (389)
T ss_dssp CCGGGSTTCGGGEEEEEESTTTT-TCGGGCCEEEECC-HHHHHHHHHHHTTTTCSCCHHHHHHHHHHHTCHHHHHHHHHH
T ss_pred CCHhhccCCCCCEEEEecChhhc-CCcccceEEEEEC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCCcchHHHHH
Confidence 1111 35789999999998 5567899999987 5566666555544444556666666555555422 22
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcC-cceeccCCCCc
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTK-YFSITVSFGSV 331 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~-~~gi~~~~G~~ 331 (386)
.+...++.+.+.+.+++.. +.-.+ ...+.++++.++. .....++.+.+. ..|+.+.+|..
T Consensus 291 ~~~~~~~~~~l~~~L~~~g---------~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~ 352 (389)
T 1gd9_A 291 RKEYDRRRKLVWKRLNEMG---------LPTVK---------PKGAFYIFPRIRDTGLTSKKFSELMLKEARVAVVPGSA 352 (389)
T ss_dssp HHHHHHHHHHHHHHHHHTT---------CCCCC---------CCBTTEECCBCGGGTCCHHHHHHHHHHHTCEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHcC---------CeecC---------CCeeeEEEEeccCCCCCHHHHHHHHHHhCCEEEeCchh
Confidence 3334455555555555431 11110 1113345555542 123556777765 67888777654
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcCC
Q 016612 332 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTGP 385 (386)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~~ 385 (386)
+.. ..++++|||++. +++++.++.|.+++++..
T Consensus 353 ~~~---------------------~~~~~iRi~~~~~~~~i~~~l~~l~~~~~~~~ 387 (389)
T 1gd9_A 353 FGK---------------------AGEGYVRISYATAYEKLEEAMDRMERVLKERK 387 (389)
T ss_dssp GCG---------------------GGTTBEEEECCSCHHHHHHHHHHHHHHHHHTT
T ss_pred hCC---------------------CCCCeEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 210 025679999974 677788888888887653
No 37
>2x5d_A Probable aminotransferase; HET: LLP PLP; 2.25A {Pseudomonas aeruginosa}
Probab=99.96 E-value=5.1e-28 Score=228.51 Aligned_cols=293 Identities=14% Similarity=0.116 Sum_probs=197.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC-----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA-----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|... |.+ +++++.+++.+.+|. ++.+++++|++++.+ +..++++||+|++++|+|+++.. .++..
T Consensus 68 ~~~y~~~~g~~~l~~~ia~~~~~~~g~~~~~~~~v~~t~g~~~a~~~~~~~~~~~gd~Vl~~~p~~~~~~~----~~~~~ 143 (412)
T 2x5d_A 68 THGYSTSRGIPRLRRAISHWYRDRYDVQIDPESEAIVTIGSKEGLAHLMLATLDHGDTILVPNPSYPIHIY----GAVIA 143 (412)
T ss_dssp -----CTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESCHHHHHHHHHHHHCCTTCEEEEEESCCHHHHH----HHHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCCCcCEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHc
Confidence 3457654 554 677777777766674 356777777899874 55578999999999999998864 34467
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
|.+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+.
T Consensus 144 g~~~~~~~~~~~~~~~~d~~~l~~~i~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~ 223 (412)
T 2x5d_A 144 GAQVRSVPLVPGIDFFNELERAIRESIPKPRMMILGFPSNPTAQCVELDFFERVVALAKQYDVMVVHDLAYADIVYDGWK 223 (412)
T ss_dssp TCEEEEEECSTTSCHHHHHHHHHHTEESCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred CCEEEEeecCCccCCCCCHHHHHHhcccCceEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEeccccccccCCCC
Confidence 8888888753 468888888888999999999999999986 688999999999999999999864421
Q ss_pred --CCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHH
Q 016612 185 --RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRV 254 (386)
Q Consensus 185 --~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 254 (386)
+... .+.++++.|+||++ |++|+|+|+++++ +.+.+.+.........+.+...+.++...++. +....
T Consensus 224 ~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 301 (412)
T 2x5d_A 224 APSIMQVPGAKDIAVEFFTLSKSY-NMAGWRIGFMVGN-PELVSALARIKSYHDYGTFTPLQVAAIAALEGDQQCVRDIA 301 (412)
T ss_dssp CCCGGGSTTGGGTEEEEEECC-CC-SCTTSCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHSCSHHHHHHH
T ss_pred CCChhhccCccCcEEEEecCcccc-CCcccceEEEEcC-HHHHHHHHHHHhhhccCCCHHHHHHHHHHHhCCHHHHHHHH
Confidence 1111 36789999999999 5567899999986 55666665554443445556555554443322 33444
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC-CceEEEEeCCHH---hHHHHHhhcC-cceeccCCC
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA-GSVLSFLTGSLA---LSKHVVETTK-YFSITVSFG 329 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~---~~~~l~~~l~-~~gi~~~~G 329 (386)
+.+.++.+.+.+.|++.. +... ... +.++++.++... ....+.+.+. ..|+.+.+|
T Consensus 302 ~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~g~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 362 (412)
T 2x5d_A 302 RQYQQRRDVLVKGLREAG---------WMVE----------NPKASMYVWAKIPEPYAHLGSLEFAKKLLQDAKVSVSPG 362 (412)
T ss_dssp HHHHHHHHHHHHHHHHHT---------CCCC----------CCSBSSEEEEECCTTTGGGCHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHHCC---------CEec----------CCCeeeEEEEEcCCccCCCCHHHHHHHHHHHCCEEEeCc
Confidence 455566666666666431 1111 112 346777775321 3556777764 458887776
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
..+.. ..++++|||++. +++++.++.|.+++++.
T Consensus 363 ~~f~~---------------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~~~ 398 (412)
T 2x5d_A 363 IGFGD---------------------YGDDHVRFALIENRDRLRQAVRGIKAMFRAD 398 (412)
T ss_dssp GGGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHHHHHHHT
T ss_pred hhhCC---------------------CCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 54210 025679999974 66777788888887654
No 38
>3kki_A CAI-1 autoinducer synthase; quorum sensing, CQSA, P virulence, acyltransferase, aminotransferase, pyridoxal PHO transferase; HET: PLP; 1.80A {Vibrio cholerae} PDB: 3hqt_A* 2wk9_A* 2wk8_A* 2wka_A* 2wk7_A
Probab=99.96 E-value=1.8e-28 Score=231.42 Aligned_cols=324 Identities=16% Similarity=0.129 Sum_probs=219.1
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CC-chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AVT 87 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~ 87 (386)
...++++ +|+++|..++|..........+........|... |. +.++++++++++++|.+..+++++|++++. ++.
T Consensus 59 ~~~ld~~-s~~~l~~~~~p~v~~a~~~~l~~~~~~~~~~~~~~g~~~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~l~ 137 (409)
T 3kki_A 59 PDDIILQ-SNDYLALANHPLIKARLAKSLLEEQQSLFMSASFLQNDYDKPMIEKRLAKFTGFDECLLSQSGWNANVGLLQ 137 (409)
T ss_dssp TTSEECC-CSCTTCCTTCHHHHHHHHHHHHSCCCCCCSBGGGGCSTTTSCHHHHHHHHHHTCSEEEEESCHHHHHHHHHH
T ss_pred CceEEee-ccCccCCcCCHHHHHHHHHHHHHcCCCCCccccccCCcHHHHHHHHHHHHHhCCCeEEEecchHHHHHHHHH
Confidence 4577888 7888887555433211111100000112222222 44 467889999999999998999999998876 667
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAH 166 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~ 166 (386)
+++++||.|++++|.|+++.. .++..|.+++.++..|++++++.+++ ++++|++++++||||.+.|+++|.++|+
T Consensus 138 ~~~~~gd~Vl~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~le~~l~~~~~~~vi~~~~~nptG~~~~l~~l~~la~ 213 (409)
T 3kki_A 138 TICQPNTNVYIDFFAHMSLWE----GARYANAQAHPFMHNNCDHLRMLIQRHGPGIIVVDSIYSTLGTIAPLAELVNISK 213 (409)
T ss_dssp HHCCTTCEEEEETTSCHHHHH----HHHHTTCEEEEECTTCHHHHHHHHHHHCSCEEEEESBCTTTCCBCCHHHHHHHHH
T ss_pred HhcCCCCEEEECCCcCHHHHH----HHHHcCCeEEEecCCCHHHHHHHHHhcCCeEEEECCCCCCCCCcCCHHHHHHHHH
Confidence 789999999999999988863 34567889999998899999999874 5899999999999999999999999999
Q ss_pred HcCCEEEEeCCCCCCCccC---------CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh--hhhcCCCC
Q 016612 167 AHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGL 235 (386)
Q Consensus 167 ~~~~~li~D~a~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~--~~~~~~~~ 235 (386)
++|++||+||+|+.+.+.. ....+.|+++.|+||+++++ +|+++++++ +.+.+... ....+...
T Consensus 214 ~~~~~li~De~~~~g~~g~~g~~~~~~~~~~~~~di~~~s~sK~~~~~----gg~v~~~~~-~~~~~~~~~~~~~~~~~~ 288 (409)
T 3kki_A 214 EFGCALLVDESHSLGTHGPNGAGLLAELGLTREVHFMTASLAKTFAYR----AGAIWCNNE-VNRCVPFISYPAIFSSTL 288 (409)
T ss_dssp HHTCEEEEECTTTTTTSSGGGCCHHHHHTCGGGCSEEEEESSSTTCSS----CEEEEESSS-GGGTHHHHCHHHHHSBCC
T ss_pred HcCCEEEEECCccccccCCCCCcchhhcCCCCCCCEEEeecchhhCCC----ceEEEECHH-HHHHHHHhCcCccccCCC
Confidence 9999999999997654321 11225789999999999643 489988754 43333221 11223334
Q ss_pred ChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhH
Q 016612 236 APFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALS 312 (386)
Q Consensus 236 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 312 (386)
++...+++..+++.. ....+...++.+.+.+.|++.. +. + .+.+.++++.++.....
T Consensus 289 ~~~~~aa~~aal~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~------~-----~~~~~~~~~~~~~~~~~ 348 (409)
T 3kki_A 289 LPYEAAGLETTLEIIESADNRRQHLDRMARKLRIGLSQLG---------LT------I-----RSESQIIGLETGDERNT 348 (409)
T ss_dssp CHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHTTT---------CC------C-----CCSSSEEEEEEESHHHH
T ss_pred cHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------Cc------c-----CCCCCEEEEEeCCHHHH
Confidence 555544444443322 2333445556666666666431 11 1 12567888888766556
Q ss_pred HHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 313 KHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 313 ~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
.++.+.+...|+.+.++.. |.. ..+++++|++++. ++++++++.|+++++..
T Consensus 349 ~~~~~~L~~~Gv~v~~~~~------~~~--------------~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~l~~~ 404 (409)
T 3kki_A 349 EKVRDYLESNGVFGSVFCR------PAT--------------SKNKNIIRLSLNSDVNDEQIAKIIEVCSDAVNYG 404 (409)
T ss_dssp HHHHHHHHHTTEECEEECT------TSS--------------CTTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHCCceEeeeCC------CCc--------------CCCCcEEEEEccCCCCHHHHHHHHHHHHHHHhcC
Confidence 6777777777876544221 100 1135789999963 77788888888887764
No 39
>1j32_A Aspartate aminotransferase; HET: PLP; 2.10A {Phormidium lapideum} SCOP: c.67.1.1
Probab=99.96 E-value=5.9e-28 Score=226.22 Aligned_cols=292 Identities=17% Similarity=0.202 Sum_probs=199.2
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.+ +++++.+++.+.+|. ++.+++++|++++.+ +.+++++||+|++++|+|+++. ..++..|
T Consensus 60 ~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g 135 (388)
T 1j32_A 60 KTRYGPAAGEPRLREAIAQKLQRDNGLCYGADNILVTNGGKQSIFNLMLAMIEPGDEVIIPAPFWVSYP----EMVKLAE 135 (388)
T ss_dssp CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEESSCCTHHH----HHHHHTT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHcC
Confidence 3457665 655 788888888877664 245556666799874 5557899999999999999886 4455678
Q ss_pred cEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 136 ~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~ 215 (388)
T 1j32_A 136 GTPVILPTTVETQFKVSPEQIRQAITPKTKLLVFNTPSNPTGMVYTPDEVRAIAQVAVEAGLWVLSDEIYEKILYDDAQH 215 (388)
T ss_dssp CEEEEECCCGGGTTCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCC
T ss_pred CEEEEecCCcccCCCCCHHHHHHhcCcCceEEEEeCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCC
Confidence 888888763 789999999889999999999999999975 899999999999999999998754321
Q ss_pred -CCCC-----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC----cHHHHH
Q 016612 185 -RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALRV 254 (386)
Q Consensus 185 -~~~~-----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 254 (386)
.... .+.|+++.|+||++ |++|+|+|+++++ +.+.+.+.........+.+...+.++...++ .+....
T Consensus 216 ~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 293 (388)
T 1j32_A 216 LSIGAASPEAYERSVVCSGFAKTY-AMTGWRVGFLAGP-VPLVKAATKIQGHSTSNVCTFAQYGAIAAYENSQDCVQEML 293 (388)
T ss_dssp CCGGGSCHHHHHTEEEEEESTTTT-TCTTTCCEEEECC-HHHHHHHHHHHHTTTCSCCHHHHHHHHHHHHSCSHHHHHHH
T ss_pred CCHHHccccccCCEEEEeechhcc-CCcccceEEEEeC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHHhCCcHHHHHHH
Confidence 1111 35789999999999 5668899999986 4566666555554445556655544433332 233444
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCc-ceeccCCCCcc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKY-FSITVSFGSVK 332 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~-~gi~~~~G~~~ 332 (386)
+...++.+.+.+.|++.+. +. +. . ...+.++++.++. .....++.+.+.. .|+.+.+|..+
T Consensus 294 ~~~~~~~~~l~~~L~~~~g--------~~------~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~ 356 (388)
T 1j32_A 294 AAFAERRRYMLDALNAMPG--------LE------CP--K-PDGAFYMFPSIAKTGRSSLDFCSELLDQHQVATVPGAAF 356 (388)
T ss_dssp HHHHHHHHHHHHHHHTCTT--------CB------CC--C-CCBTTEECCBCGGGTCCHHHHHHHHHHHHCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHhhCCC--------Cc------cc--C-CCeeEEEEEecCCCCCCHHHHHHHHHHhCCEEEeChhhh
Confidence 5556666666666665421 11 11 0 0112333344432 1134566666654 58877766532
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
. .++++|+|++. +++++.++.|++++++
T Consensus 357 ~-----------------------~~~~iRis~~~~~~~i~~~~~~l~~~l~~ 386 (388)
T 1j32_A 357 G-----------------------ADDCIRLSYATDLDTIKRGMERLEKFLHG 386 (388)
T ss_dssp T-----------------------CTTBEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred C-----------------------CCCcEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 1 14569999973 6677778888777764
No 40
>3euc_A Histidinol-phosphate aminotransferase 2; YP_297314.1, structur genomics, joint center for structural genomics, JCSG; HET: MSE; 2.05A {Ralstonia eutropha JMP134} SCOP: c.67.1.0
Probab=99.96 E-value=3.5e-28 Score=226.07 Aligned_cols=277 Identities=16% Similarity=0.201 Sum_probs=197.8
Q ss_pred chHHHHHHHHHhhcCC-C--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKA-D--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~-~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+...++++.+++++|. + +.+++++|++++.+ +..++++||+|++++|+|+++. ..++..|.+++.++.+
T Consensus 67 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~ 142 (367)
T 3euc_A 67 PSSEALRAKLKEVMQVPAGMEVLLGNGSDEIISMLALAAARPGAKVMAPVPGFVMYA----MSAQFAGLEFVGVPLRADF 142 (367)
T ss_dssp CCHHHHHHHHHHHHTCCTTCEEEEEEHHHHHHHHHHHHTCCTTCEEEEEESCSCCSC----HHHHTTTCEEEEEECCTTS
T ss_pred CcHHHHHHHHHHHhCCCCcceEEEcCCHHHHHHHHHHHHcCCCCEEEEcCCCHHHHH----HHHHHcCCeEEEecCCCCC
Confidence 3567889999999987 3 45555556699875 4557899999999999999885 4456789999988854
Q ss_pred --CHHHHHhhhCC-CceEEEEeCCCCCCccccc---HHHHHHHHHHc--CCEEEEeCCCCCCCc----cCCCCCCccEEE
Q 016612 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICD---IRKIAEMAHAH--GALLLVDNSIMSPVL----SRPLELGADIVM 195 (386)
Q Consensus 128 --d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~---l~~i~~la~~~--~~~li~D~a~~~~~~----~~~~~~~~di~~ 195 (386)
|++++++++++ ++++|++++|+||||.+.+ +++|.++|++| |+++|+|++|+.... ......+.++++
T Consensus 143 ~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~ 222 (367)
T 3euc_A 143 TLDRGAMLAAMAEHQPAIVYLAYPNNPTGNLFDAADMEAIVRAAQGSVCRSLVVVDEAYQPFAQESWMSRLTDFGNLLVM 222 (367)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHTBTTSCBCEEEEECTTCCSSSCCSGGGGGTCTTEEEE
T ss_pred CCCHHHHHHHhhccCCCEEEEcCCCCCCCCCCCHHHHHHHHHhhhhcCCCcEEEEeCcchhhcccchHHHHhhCCCEEEE
Confidence 89999999987 8999999999999999974 77888889999 999999999874321 112234567999
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCC
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
.|+||+ +.+|+|+|+++++ +++.+.+..... ..+.+...+.++...++. +..+.++..++.+.+.+.+++.+
T Consensus 223 ~s~sK~--~~~G~r~G~~~~~-~~~~~~~~~~~~--~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~ 297 (367)
T 3euc_A 223 RTVSKL--GLAGIRLGYVAGD-PQWLEQLDKVRP--PYNVNVLTEATALFALEHVAVLDEQAAQLRAERSRVAEGMAAHG 297 (367)
T ss_dssp EECCCT--TSCSCCEEEEEEC-HHHHHHHGGGCC--SSCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHTST
T ss_pred ecchhh--cccccCceeeeeC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 999999 4567899999986 556555544332 234566666666555554 23344455555666666665543
Q ss_pred CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 273 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
.+ .++ +..+.++++.++ ...++.+.+...|+.+++|..+.
T Consensus 298 g~--------------~~~----~~~~~~~~~~~~---~~~~l~~~l~~~gi~v~~~~~~~------------------- 337 (367)
T 3euc_A 298 GV--------------TVF----PSAANFLLARVP---DAAQTFDRLLARKVLIKNVSKMH------------------- 337 (367)
T ss_dssp TC--------------EEC----CCSSSEEEEECS---CHHHHHHHHHTTTEECEECGGGC-------------------
T ss_pred Cc--------------EEC----CCCCeEEEEECC---CHHHHHHHHHHCCeEEEECCccC-------------------
Confidence 21 111 224667788776 35667777777888877765421
Q ss_pred hcCCCCCeEEEEecc-CChHHHHHHHHHHHh
Q 016612 353 ARGLTEDLVRISVGI-EDVNDLISDLDKALR 382 (386)
Q Consensus 353 ~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~ 382 (386)
+..++++|+|++. ++++++++.|+++++
T Consensus 338 --~~~~~~iRis~~~~~~i~~~~~~l~~~l~ 366 (367)
T 3euc_A 338 --PLLANCLRVTVSTPEENAQFLEAFAASLQ 366 (367)
T ss_dssp --GGGTTEEEEECCCHHHHHHHHHHHHHHTC
T ss_pred --CCCCCEEEEecCCHHHHHHHHHHHHHHhc
Confidence 1136789999974 778888888888765
No 41
>1fg7_A Histidinol phosphate aminotransferase; HISC, histidine biosynthesis, pyridoxal PH montreal-kingston bacterial structural genomics initiative; HET: PMP; 1.50A {Escherichia coli} SCOP: c.67.1.1 PDB: 1fg3_A* 1gew_A* 1gex_A* 1gey_A* 1iji_A*
Probab=99.96 E-value=3.8e-27 Score=218.15 Aligned_cols=299 Identities=17% Similarity=0.177 Sum_probs=196.2
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEeCcH-HHHHH-HHHH
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALA-AVTH 88 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~g-t~al~-~~~~ 88 (386)
..++++.+...+|. ++.+ .. .....|...+ ..++++.+++++|.+ +.+++++| ++++. ++.+
T Consensus 30 ~~i~l~~~~~~~~~-~~~v---------a~--~~~~~Y~~~~---~~~lr~~la~~~~~~~~~v~~~~G~~~ai~~~~~~ 94 (356)
T 1fg7_A 30 GDVWLNANEYPTAV-EFQL---------TQ--QTLNRYPECQ---PKAVIENYAQYAGVKPEQVLVSRGADEGIELLIRA 94 (356)
T ss_dssp CSEECSSCCCSSCC-CCCC---------CC--CCTTSCCCSS---CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHH
T ss_pred ceEEeeCCCCCCCC-CHhH---------hh--hhhccCCCcc---HHHHHHHHHHHhCCChHHEEEcCCHHHHHHHHHHH
Confidence 46777755555664 2222 11 1234555432 467888888888876 45555555 68987 4555
Q ss_pred hcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHH---
Q 016612 89 LLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIR--- 159 (386)
Q Consensus 89 ~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~--- 159 (386)
++++| |+|++++|+|+++.. .++..|.+++.++.+ |++++++.++ ++++|++++|+||||.+.+.+
T Consensus 95 ~~~~g~d~Vl~~~p~~~~~~~----~~~~~g~~~~~v~~~~~~~~d~~~l~~~i~-~~~~v~l~~p~nptG~~~~~~~l~ 169 (356)
T 1fg7_A 95 FCEPGKDAILYCPPTYGMYSV----SAETIGVECRTVPTLDNWQLDLQGISDKLD-GVKVVYVCSPNNPTGQLINPQDFR 169 (356)
T ss_dssp HCCTTTCEEEECSSSCTHHHH----HHHHHTCEEEECCCCTTSCCCHHHHHTSCT-TEEEEEEESSCTTTCCCCCHHHHH
T ss_pred HhCCCCCEEEEeCCChHHHHH----HHHHcCCEEEEeeCCCCCCCCHHHHHHHhc-CCCEEEEeCCCCCCCCCCCHHHHH
Confidence 78899 999999999999864 445678888888753 7899999888 899999999999999998755
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCC-ccC---C-CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCC
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPV-LSR---P-LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG 234 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~-~~~---~-~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~ 234 (386)
+|.++|+ +|+++|+||+|+... ..+ . ...+.++++.|+||++ |.+|+|+|+++++ +++.+.+...... .+
T Consensus 170 ~l~~~~~-~~~~li~De~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~~--~~ 244 (356)
T 1fg7_A 170 TLLELTR-GKAIVVADEAYIEFCPQASLAGWLAEYPHLAILRTLSKAF-ALAGLRCGFTLAN-EEVINLLMKVIAP--YP 244 (356)
T ss_dssp HHHHHHT-TTCEEEEECTTGGGSGGGCSGGGTTTCTTEEEEEESSSTT-CCGGGCCEEEEEC-HHHHHHHHHHSCS--SC
T ss_pred HHHHhCC-CCCEEEEEccchhhcCCCcHHHHHhhCCCEEEEecchHhh-cCchhhhEEEEeC-HHHHHHHHHhcCC--CC
Confidence 4555566 899999999987433 111 1 2236789999999999 5568999999996 5566655544332 24
Q ss_pred CChhhHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH
Q 016612 235 LAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 309 (386)
Q Consensus 235 ~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (386)
.+...+.++...++. +....+...++.+.+.+.+++.+.+ . .+ .+..+.++++.++
T Consensus 245 ~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~---~----------~~----~~~~~~~~~~~~~-- 305 (356)
T 1fg7_A 245 LSTPVADIAAQALSPQGIVAMRERVAQIIAEREYLIAALKEIPCV---E----------QV----FDSETNYILARFK-- 305 (356)
T ss_dssp SCHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTE---E----------EE----CCCSSSEEEEEET--
T ss_pred CCHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHhCCCc---e----------EE----CCCCCeEEEEECC--
Confidence 566666666666654 2233344445555566666554311 0 00 0224677888886
Q ss_pred HhHHHHHhhcCcceeccCC-CCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHH
Q 016612 310 ALSKHVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLD 378 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~-G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~ 378 (386)
...++.+.+..+|+.+++ |..+ + .++++|||++. ++++++++.|+
T Consensus 306 -~~~~l~~~L~~~gI~v~~~g~~~----------------------~-~~~~iRis~~~~~e~~~~~~~l~ 352 (356)
T 1fg7_A 306 -ASSAVFKSLWDQGIILRDQNKQP----------------------S-LSGCLRITVGTREESQRVIDALR 352 (356)
T ss_dssp -THHHHHHHHHHTTEECEECTTST----------------------T-CTTEEEEECCCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHCCEEEEECCCCC----------------------C-CCCeEEEEeCCHHHHHHHHHHHH
Confidence 245677777777888776 5431 1 13579999974 44444444443
No 42
>1lc5_A COBD, L-threonine-O-3-phosphate decarboxylase; PLP-dependent decarboxylase cobalamin, lyase; 1.46A {Salmonella enterica} SCOP: c.67.1.1 PDB: 1lc7_A* 1lc8_A* 1lkc_A*
Probab=99.96 E-value=5.7e-28 Score=224.40 Aligned_cols=278 Identities=14% Similarity=0.131 Sum_probs=191.1
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCC-----
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD----- 128 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d----- 128 (386)
...++++.+++++|.+ +.+++++|++++.+++..+ +||+|++++|+|+++. ..++..|.+++.++.+.
T Consensus 60 ~~~~l~~~la~~~~~~~~~v~~~~g~~~al~~~~~~~-~gd~vl~~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~ 134 (364)
T 1lc5_A 60 DYFHLHQALARHHQVPASWILAGNGETESIFTVASGL-KPRRAMIVTPGFAEYG----RALAQSGCEIRRWSLREADGWQ 134 (364)
T ss_dssp TCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHH-CCSEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTTC
T ss_pred CHHHHHHHHHHHHCcCHHHEEECCCHHHHHHHHHHHc-CCCeEEEeCCCcHHHH----HHHHHcCCeEEEEeCCcccccc
Confidence 3467888888888875 4556666679998665555 7899999999999886 34456788988888642
Q ss_pred -HHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc-----cC-CCCCCccEEEecc
Q 016612 129 -LDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SR-PLELGADIVMHSA 198 (386)
Q Consensus 129 -~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~-----~~-~~~~~~di~~~S~ 198 (386)
++++.+.++++++++++++|+||||.+.| +++|.++|+++|+++|+|++|+.... .. ....+.++++.|+
T Consensus 135 ~l~~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 214 (364)
T 1lc5_A 135 LTDAILEALTPDLDCLFLCTPNNPTGLLPERPLLQAIADRCKSLNINLILDEAFIDFIPHETGFIPALKDNPHIWVLRSL 214 (364)
T ss_dssp CCTTHHHHCCTTCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGSTTCCCSGGGCTTCTTEEEEEES
T ss_pred hhHHHHHhccCCCCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCcEEEEECcChhhccCccchhhHhccCCCEEEEEEC
Confidence 35566666678999999999999999998 89999999999999999999874332 11 1224678999999
Q ss_pred ccccccCCCceEEEEE-EcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCc
Q 016612 199 TKFIAGHSDVMAGVLA-VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRV 274 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~ 274 (386)
||++ |.+|+|+|+++ ++ +++.+.+..... ....+...++++...++. +....+...++.+.+.+.+++.+
T Consensus 215 sK~~-~~~G~r~G~~~~~~-~~~~~~l~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-- 288 (364)
T 1lc5_A 215 TKFY-AIPGLRLGYLVNSD-DAAMARMRRQQM--PWSVNALAALAGEVALQDSAWQQATWHWLREEGARFYQALCQLP-- 288 (364)
T ss_dssp TTTT-TCTTTCCEEEECCC-HHHHHHHHHHSC--TTCSCHHHHHHHHHGGGCHHHHHHHHHHHHHHHHHHHHHHHTST--
T ss_pred chhh-cCCccceEEEEECC-HHHHHHHHHhCC--CCCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcCC--
Confidence 9999 44578999999 65 566665554432 335666777777666665 22333344455555556665432
Q ss_pred ceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhc
Q 016612 275 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 354 (386)
Q Consensus 275 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~ 354 (386)
++.+. +..++++++.+++. ...+.+.+...|+.+.+|..+.
T Consensus 289 ------------~~~~~----~~~g~~~~~~~~~~--~~~l~~~l~~~gi~v~~g~~~~--------------------- 329 (364)
T 1lc5_A 289 ------------LLTVY----PGRANYLLLRCERE--DIDLQRRLLTQRILIRSCANYP--------------------- 329 (364)
T ss_dssp ------------TEEEC----CCSSSEEEEEESCT--TCCHHHHHHTTTEECEECTTST---------------------
T ss_pred ------------CCEEC----CCCCeEEEEECCCc--HHHHHHHHHHCCcEEeeCcccC---------------------
Confidence 21111 12467788887542 3345555556688877765421
Q ss_pred CCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 016612 355 GLTEDLVRISVGI-EDVNDLISDLDKALRT 383 (386)
Q Consensus 355 ~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 383 (386)
+..++++|||++. ++++++++.|++.+++
T Consensus 330 ~~~~~~iRis~~~~~~~~~l~~~l~~~~~~ 359 (364)
T 1lc5_A 330 GLDSRYYRVAIRSAAQNERLLAALRNVLTG 359 (364)
T ss_dssp TCCTTEEEEECCCHHHHHHHHHHHHHHC--
T ss_pred CCCCCEEEEEeCCHHHHHHHHHHHHHHhhc
Confidence 1135789999974 5667888888887765
No 43
>3ele_A Amino transferase; RER070207001803, structural genomics, JOI for structural genomics, JCSG; HET: MSE PLP; 2.10A {Eubacterium rectale}
Probab=99.96 E-value=1.9e-27 Score=223.55 Aligned_cols=290 Identities=16% Similarity=0.150 Sum_probs=204.3
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCC-CEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|.+. |.+ +++++.+++.+.+|. ++.+++++|++++.+ +..++++| |+|++++|+|+++. ..++..
T Consensus 69 ~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~~~g~~~al~~~~~~l~~~g~d~vl~~~p~~~~~~----~~~~~~ 144 (398)
T 3ele_A 69 LHGYTSAQGDVETRAAIAEFLNNTHGTHFNADNLYMTMGAAASLSICFRALTSDAYDEFITIAPYFPEYK----VFVNAA 144 (398)
T ss_dssp HHSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCSTTCEEEEESSCCTHHH----HHHHHT
T ss_pred cCCcCCCCCcHHHHHHHHHHHHHHhCCCCChHHEEEccCHHHHHHHHHHHHcCCCCCEEEEeCCCchhhH----HHHHHc
Confidence 3567665 665 789999999888763 256666667799874 55678999 99999999999886 445678
Q ss_pred CcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHH------cCCEEEEeCCCCCCC
Q 016612 118 GVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHA------HGALLLVDNSIMSPV 182 (386)
Q Consensus 118 g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~------~~~~li~D~a~~~~~ 182 (386)
|.+++.++.+ |++++++++++++++|++++|+||||.+.+ +++|.++|++ +|+++|+||+|+...
T Consensus 145 g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~~~~~~ 224 (398)
T 3ele_A 145 GARLVEVPADTEHFQIDFDALEERINAHTRGVIINSPNNPSGTVYSEETIKKLSDLLEKKSKEIGRPIFIIADEPYREIV 224 (398)
T ss_dssp TCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHHHTSCCEEEEECTTTTCB
T ss_pred CCEEEEEecCCcCCcCCHHHHHHHhCcCCCEEEEcCCCCCCCCCCCHHHHHHHHHHHHhhhhccCCCeEEEEeccccccc
Confidence 8999998864 899999999999999999999999999987 7778899999 999999999997532
Q ss_pred cc-----CC-CCCCccEEEeccccccccCCCceEEEEEEcChh-----HHHHHHHhhhhc-CCCCChhhHHHHHhcCCcH
Q 016612 183 LS-----RP-LELGADIVMHSATKFIAGHSDVMAGVLAVKGER-----LAKELYFLQNAE-GSGLAPFDCWICLRGVKTM 250 (386)
Q Consensus 183 ~~-----~~-~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~-----~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 250 (386)
.. .. ...+.++++.|+||++ |.+|+|+||++++++. +...+....... ....+...+.++...++..
T Consensus 225 ~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~ 303 (398)
T 3ele_A 225 YDGIKVPFVTKYYDNTLVCYSYSKSL-SLPGERIGYVLVPDEVYDKAELYAAVCGAGRALGYVCAPSLFQKMIVKCQGAT 303 (398)
T ss_dssp CTTCCCCCGGGTCSSEEEEEESTTTS-SCTTTCCEEEECCTTSTTHHHHHHHHHHHHHHTTCCCSCHHHHHHHTTCTTCC
T ss_pred cCCCCcCChHhhcCCeEEEEehhhcC-CCccceeEEEEEcchhhhHHHHHHHHHHHhhhccccCCCHHHHHHHHHHhcCH
Confidence 21 11 1236789999999999 5557899999998652 223333333332 2344555555555544432
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCC
Q 016612 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 330 (386)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~ 330 (386)
. ..+.+.++.+.+.+.+++.. +. +. . ...+.++++.++.. ....+.+.+...|+.+.+|.
T Consensus 304 ~-~~~~~~~~~~~l~~~L~~~g---------~~------~~--~-~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~ 363 (398)
T 3ele_A 304 G-DINAYKENRDLLYEGLTRIG---------YH------CF--K-PDGAFYMFVKALED-DSNAFCEKAKEEDVLIVAAD 363 (398)
T ss_dssp C-CHHHHHHHHHHHHHHHHHHT---------CC------EE--C-CSBSSEEEEECSSS-CHHHHHHHHHTTTEECEESG
T ss_pred H-HHHHHHHHHHHHHHHHHHcC---------Ce------ec--C-CCeeEEEEEEcCCC-CHHHHHHHHHHCCEEEeCcc
Confidence 1 23455666677777776531 11 00 0 11234477777543 35677777778899888776
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
.+. .++++|||++. +++++.++.|++++++
T Consensus 364 ~~~-----------------------~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 395 (398)
T 3ele_A 364 GFG-----------------------CPGWVRISYCVDREMIKHSMPAFEKIYKK 395 (398)
T ss_dssp GGT-----------------------CTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred ccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 521 14679999974 6778888888888765
No 44
>3fdb_A Beta C-S lyase, putative PLP-dependent beta-cystathionase; PLP-dependent transferase-like fold, structural genomics; HET: LLP; 1.99A {Corynebacterium diphtheriae}
Probab=99.96 E-value=1e-28 Score=230.45 Aligned_cols=295 Identities=12% Similarity=0.110 Sum_probs=200.6
Q ss_pred CccccCCCCchHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 46 PYDYTRSGNPTRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 46 ~~~y~~~g~~~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
...|.+.+..+++++.+++.+.+|. ++.+++++|++++.+ +..++++||+|+++.|+|+++. ..++..|.+
T Consensus 53 ~~~y~~~~~~lr~~la~~~~~~~~~~~~~~~i~~t~g~~~a~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g~~ 128 (377)
T 3fdb_A 53 AFGYQPDGSLLSQATAEFYADRYGYQARPEWIFPIPDVVRGLYIAIDHFTPAQSKVIVPTPAYPPFF----HLLSATQRE 128 (377)
T ss_dssp CCSSCCSSCCHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTTCCEEEEESCCTHHH----HHHHHHTCC
T ss_pred CCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEeCChHHHHHHHHHHhcCCCCEEEEcCCCcHhHH----HHHHHcCCE
Confidence 3455544444788888888877653 357777777899874 5567899999999999999886 445567888
Q ss_pred EEEeCCC---CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC-----CC-C
Q 016612 121 VKRVNTC---DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR-----PL-E 188 (386)
Q Consensus 121 ~~~v~~~---d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~-----~~-~ 188 (386)
++.++.+ |++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+...... +. .
T Consensus 129 ~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~ 208 (377)
T 3fdb_A 129 GIFIDATGGINLHDVEKGFQAGARSILLCNPYNPLGMVFAPEWLNELCDLAHRYDARVLVDEIHAPLVFDGQHTVAAGVS 208 (377)
T ss_dssp EEEEECTTSCCHHHHHHHHHTTCCEEEEESSBTTTTBCCCHHHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSC
T ss_pred EEEccCCCCCCHHHHHHHhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEcccchhhcCCCCCcccHHH
Confidence 9888876 899999999888999999999999999985 7778888999999999999987532211 11 1
Q ss_pred ---CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHHHHHHH
Q 016612 189 ---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNA 261 (386)
Q Consensus 189 ---~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 261 (386)
.+.++++.|+||++ |.+|+|+|++++.++.+.+.+...........++..+.++...++. +....+...++.
T Consensus 209 ~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~ 287 (377)
T 3fdb_A 209 DTAASVCITITAPSKAW-NIAGLKCAQIIFSNPSDAEHWQQLSPVIKDGASTLGLIAAEAAYRYGTDFLNQEVAYLKNNH 287 (377)
T ss_dssp HHHHHHEEEEECSTTTT-TCGGGCCEEEECCSHHHHHHHHHSCHHHHCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred ccCCCcEEEEEeChHhc-cCcchhheEEEeCCHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHhccHHHHHHHHHHHHHHH
Confidence 24469999999999 5567899998886677777665554443345566555554443332 234445555666
Q ss_pred HHHHHHHhh-CCCcceEecCCCCCCCchhhhhhccCCC-CceEEEEeCCHHhHHHHHhhcCc-ceeccCCCCcccccccc
Q 016612 262 QKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGA-GSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMP 338 (386)
Q Consensus 262 ~~l~~~l~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~gi~~~~G~~~~~~~~p 338 (386)
+.+.+.+++ .+. + .+. ... +.++++.++......++.+.+.. .|+.+.+|..+...
T Consensus 288 ~~l~~~L~~~~~~--------~------~~~----~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~~--- 346 (377)
T 3fdb_A 288 DFLLHEIPKRIPG--------A------KIT----PMQATYLMWIDFRDTTIEGSPSEFFIEKAKVAMNDGAWFGED--- 346 (377)
T ss_dssp HHHHHHHHHHSTT--------C------EEC----CCSBCSEEEEECTTSCCCSCHHHHHHHHHCEECEEGGGGCGG---
T ss_pred HHHHHHHHhhCCC--------c------eEe----cCCeeEEEEEECcccCCCHHHHHHHHHhCCEEecCChhccCC---
Confidence 666666665 321 1 111 112 33446666442111233333333 37777776542210
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
.++++|+|++. +++++.++.|++++++.
T Consensus 347 ------------------~~~~~Ris~~~~~e~i~~~l~~l~~~l~~~ 376 (377)
T 3fdb_A 347 ------------------GTGFCRLNFATSREVLEEAIDRMAKAVSHH 376 (377)
T ss_dssp ------------------GTTEEEEECCSCHHHHHHHHHHHHHHHTTC
T ss_pred ------------------CCCEEEEEeCCCHHHHHHHHHHHHHHHhhc
Confidence 25779999974 67778888888888764
No 45
>3ezs_A Aminotransferase ASPB; NP_207418.1, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 2.19A {Helicobacter pylori 26695} SCOP: c.67.1.0
Probab=99.96 E-value=4.4e-28 Score=226.06 Aligned_cols=319 Identities=12% Similarity=0.018 Sum_probs=211.7
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHH-
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA- 84 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~- 84 (386)
.+++++.+...++ .++.+.++ ... .. .....|... |.+ +++++.+++++.+|. ++.+++++|++++.
T Consensus 24 ~~i~l~~~~~~~~-~~~~v~~a--~~~-~~--~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~i~~t~g~~~al~~ 97 (376)
T 3ezs_A 24 RGLDLGIGEPQFE-TPKFIQDA--LKN-HT--HSLNIYPKSAFEESLRAAQRGFFKRRFKIELKENELISTLGSREVLFN 97 (376)
T ss_dssp CCCBCSSCCCCSC-CCHHHHHH--HHT-TG--GGGGSCCCTTCCHHHHHHHHHHHHHHHSCCCCGGGEEEESSSHHHHHH
T ss_pred CEEEeCCCCCCCC-CCHHHHHH--HHH-hh--hhcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEECcCcHHHHHH
Confidence 7788885554455 23333332 111 11 334567765 654 788899998888775 25667777789997
Q ss_pred HHHHhcCC--CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHH----HHHhhhCCCceEEEEeCCCCCCccccc-
Q 016612 85 AVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLD----EVASAIGPWTKLVWVESPTNPRQQICD- 157 (386)
Q Consensus 85 ~~~~~~~~--g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~----~l~~~~~~~~~~v~~~~~~nptG~~~~- 157 (386)
++..++++ ||+|++++|+|+++. ..++..|.+++.++.++.+ ++++.+.+++++|++++|+||||.+.+
T Consensus 98 ~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~~~~p~nptG~~~~~ 173 (376)
T 3ezs_A 98 FPSFVLFDYQNPTIAYPNPFYQIYE----GAAKFIKAKSLLMPLTKENDFTPSLNEKELQEVDLVILNSPNNPTGRTLSL 173 (376)
T ss_dssp HHHHHTTTCSSCEEEEEESCCTHHH----HHHHHTTCEEEEEECCGGGTSCCCCCHHHHHHCSEEEECSSCTTTCCCCCH
T ss_pred HHHHHcCCCCCCEEEEecCCcHhHH----HHHHHcCCEEEEcccCCCCCcchhHHhhhccCCCEEEEcCCCCCcCCCCCH
Confidence 55667899 999999999999885 4456788999998875322 556666668999999999999999987
Q ss_pred --HHHHHHHHHHcCCEEEEeCCCCCCCcc----CCC---------CCCccEEEeccccccccCCCceEEEEEEcChhHHH
Q 016612 158 --IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL---------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (386)
Q Consensus 158 --l~~i~~la~~~~~~li~D~a~~~~~~~----~~~---------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~ 222 (386)
+++|.++|+++|+++|+||+|+..... ... ..+.++++.|+||++ |.+|+|+||++++ +++.+
T Consensus 174 ~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~ 251 (376)
T 3ezs_A 174 EELISWVKLALKHDFILINDECYSEIYENTPPPSLLEACMLAGNEAFKNVLVIHSLSKRS-SAPGLRSGFIAGD-SRLLE 251 (376)
T ss_dssp HHHHHHHHHHHHHTCEEEEECTTTTCBSSSCCCCHHHHHHHTTCTTCTTEEEEEESTTTT-TCGGGCCEEEEEC-HHHHH
T ss_pred HHHHHHHHHHHHcCcEEEEEccchhhccCCCCCCHHHccccccccccCcEEEEecchhcc-CCccceeEEEeeC-HHHHH
Confidence 778888899999999999999753321 111 357789999999999 5567899999985 56666
Q ss_pred HHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceE
Q 016612 223 ELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL 302 (386)
Q Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~ 302 (386)
.+...........+...+.++...++.. ...++..+..+...+.+.+.-. ++. .+..+.++
T Consensus 252 ~~~~~~~~~~~~~~~~~~~a~~~~l~~~-~~~~~~~~~~~~~~~~l~~~l~-------~~~-----------~~~~~~~~ 312 (376)
T 3ezs_A 252 KYKAFRAYLGYTSANAIQKASEAAWLDD-RHAEFFRNIYANNLKLARKIFK-------NTL-----------IYPYSFYV 312 (376)
T ss_dssp HHHHHHTTTCCCCCHHHHHHHHHHHHCS-HHHHHHHHHHHHHHHHHHHHST-------TCC-----------CCSBSSEE
T ss_pred HHHHHHhhhcCCCChHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHhc-------CCC-----------CCCcceEE
Confidence 6666555545566666666655444321 1122333333333333332110 111 12346677
Q ss_pred EEEeCCHHhHHHHHhhcCc-ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHH
Q 016612 303 SFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDK 379 (386)
Q Consensus 303 ~~~~~~~~~~~~l~~~l~~-~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~ 379 (386)
++.++ ....+.+.+.. .|+.+.+|..+.. + ...++++|||++ .++++++++.|++
T Consensus 313 ~~~~~---~~~~~~~~l~~~~gi~v~~g~~~~~---~----------------~~~~~~iRis~~~~~~~i~~~l~~l~~ 370 (376)
T 3ezs_A 313 YLPVQ---NGENFAKTLYQNEGIITLPALYLGR---N----------------RIGADYVRLALVYDTPLLEKPLEIIET 370 (376)
T ss_dssp EEECS---CHHHHHHHHHHHHCCBCEEGGGGCS---T----------------TTTTTEEEEECCSCHHHHHHHHHHHHH
T ss_pred EEECC---CHHHHHHHHHHhCCEEEeCcHHhCC---C----------------CCCCCeEEEEEcCCHHHHHHHHHHHHH
Confidence 77776 24556666655 6888777665221 0 124678999985 4778888888888
Q ss_pred HHhc
Q 016612 380 ALRT 383 (386)
Q Consensus 380 ~l~~ 383 (386)
++++
T Consensus 371 ~l~~ 374 (376)
T 3ezs_A 371 YREN 374 (376)
T ss_dssp HHCC
T ss_pred HHHh
Confidence 8765
No 46
>2w8t_A SPT, serine palmitoyltransferase; HET: LLP; 1.25A {Sphingomonas paucimobilis} PDB: 2w8u_A* 2w8w_A* 2xbn_A* 2w8j_A* 2w8v_A* 2jg2_A* 2jgt_A 2x8u_A*
Probab=99.96 E-value=7.4e-28 Score=228.43 Aligned_cols=326 Identities=15% Similarity=0.167 Sum_probs=223.2
Q ss_pred ceeeccCCCCCCCCC-cccceeeeeeeecCCCCCCCCccccCC-CC-chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HH
Q 016612 11 TLLMNFSNEFDPYGA-LSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKADRALCFTSGMAALA-AV 86 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~ 86 (386)
...++++ .++++|. .++.+.++........ ..+...|... |. +...++++.+++++|.++.+++++|++++. ++
T Consensus 64 ~~~id~~-~~~~lg~~~~~~v~~a~~~~~~~~-~~~~~~~~~~~G~~~~~~~l~~~la~~~g~~~~i~~~sGs~a~~~al 141 (427)
T 2w8t_A 64 KDTILLG-TYNYMGMTFDPDVIAAGKEALEKF-GSGTCGSRMLNGTFHDHMEVEQALRDFYGTTGAIVFSTGYMANLGII 141 (427)
T ss_dssp EEEEECS-CCCTTCGGGCHHHHHHHHHHHHHH-CSCCCSCTTTTCCCHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHH
T ss_pred ceEEEEE-CcccccCCCCHHHHHHHHHHHHHh-CCCCcccccccCCcHHHHHHHHHHHHHhCCCceEEecCcHHHHHHHH
Confidence 3467888 5566774 4444443211111000 0111122222 54 578999999999999999999999998875 55
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC----CceEEEEeCCCCCCcccccHHHHH
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP----WTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~----~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
.+++++||.|+++.+.|+++... ++..|.+++.++..|++++++.+++ ++++|++++++||+|.+.|+++|.
T Consensus 142 ~~l~~~gd~vl~~~~~h~~~~~~----~~~~g~~~~~~~~~d~~~le~~l~~~~~~~~~~v~~~~~~n~tG~~~~l~~l~ 217 (427)
T 2w8t_A 142 STLAGKGEYVILDADSHASIYDG----CQQGNAEIVRFRHNSVEDLDKRLGRLPKEPAKLVVLEGVYSMLGDIAPLKEMV 217 (427)
T ss_dssp HHHSCTTCEEEEETTCCHHHHHH----HHHSCSEEEEECTTCHHHHHHHHHTSCSSSCEEEEEESEETTTTEECCHHHHH
T ss_pred HHhcCCCCEEEECCcccHHHHHH----HHHcCCeeEEeCCCCHHHHHHHHHhccCCCCeEEEEcCCCCCCCCccCHHHHH
Confidence 66789999999999999988643 4467889999998999999998875 789999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCCCCccC---------CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh--hhhc
Q 016612 163 EMAHAHGALLLVDNSIMSPVLSR---------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAE 231 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~~~~~~~---------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~--~~~~ 231 (386)
++|+++|+++|+||+|+.+.+.. ....+.|++++|+||+++ ++ +|+++++++ +.+.+... ....
T Consensus 218 ~l~~~~g~~li~Dea~~~~~~~~~g~~~~~~~~~~~~~di~~~s~sK~~g-~~---gG~v~~~~~-l~~~l~~~~~~~~~ 292 (427)
T 2w8t_A 218 AVAKKHGAMVLVDEAHSMGFFGPNGRGVYEAQGLEGQIDFVVGTFSKSVG-TV---GGFVVSNHP-KFEAVRLACRPYIF 292 (427)
T ss_dssp HHHHHTTCEEEEECTTTTTTSSTTSCCHHHHTTCTTCCSEEEEESSSTTC-SC---CEEEEECCT-TGGGGGGTCHHHHS
T ss_pred HHHHHcCCEEEEECCccccccCCCCCchHhhcCCCcCCcEEEecchhhhc-cC---CCEEEeCHH-HHHHHHHhcccccc
Confidence 99999999999999998765431 112357999999999995 44 499998754 44433322 1122
Q ss_pred CCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC
Q 016612 232 GSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS 308 (386)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~ 308 (386)
+...++....++..+++. .....++..++.+.+.+.|++.. ++ +.. +...++++++.+++
T Consensus 293 ~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~------~~~--~~~~~~~~~~~~~~ 355 (427)
T 2w8t_A 293 TASLPPSVVATATTSIRKLMTAHEKRERLWSNARALHGGLKAMG---------FR------LGT--ETCDSAIVAVMLED 355 (427)
T ss_dssp SCCCCHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHT---------CE------ESC--SSCCSSEEEEEESS
T ss_pred cCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHcC---------Cc------ccC--CCCCCCEEEEEECC
Confidence 334555555554343332 24555666777777777776531 11 100 01146789998877
Q ss_pred HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 309 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 309 ~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
.....++.+.+...|+.+.+|.... .| .+.+++|++++. ++++++++.|++++++.
T Consensus 356 ~~~~~~l~~~L~~~Gi~v~~~~~~~---~~-----------------~~~~~lRi~~~~~~t~e~i~~~~~~l~~~l~~~ 415 (427)
T 2w8t_A 356 QEQAAMMWQALLDGGLYVNMARPPA---TP-----------------AGTFLLRCSICAEHTPAQIQTVLGMFQAAGRAV 415 (427)
T ss_dssp HHHHHHHHHHHHHTTEECEEECTTT---SC-----------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCeEEeeeCCCC---CC-----------------CCCeEEEEEeCCCCCHHHHHHHHHHHHHHHHHh
Confidence 6667788888877888776654311 00 124679999974 67777777777777653
No 47
>2dou_A Probable N-succinyldiaminopimelate aminotransfera; PLP-dependent enzyme, structural genomics, NPPSFA; HET: EPE; 2.30A {Thermus thermophilus}
Probab=99.96 E-value=1.1e-28 Score=230.14 Aligned_cols=319 Identities=15% Similarity=0.079 Sum_probs=200.1
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCCC-----ceEEeCcHHHHHH
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGMAALA 84 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~gt~al~ 84 (386)
..++++.+...+| .+|.+.++... .+.......|... |.+ +++++.+++.+.+|.+ +.+++++|++++.
T Consensus 26 ~~idl~~~~~~~~-~~~~v~~a~~~---~~~~~~~~~y~~~~~~~~l~~~ia~~~~~~~g~~~~~~~~v~~~~g~~~a~~ 101 (376)
T 2dou_A 26 GLIDLSIGSTDLP-PPEAPLKALAE---ALNDPTTYGYCLKSCTLPFLEEAARWYEGRYGVGLDPRREALALIGSQEGLA 101 (376)
T ss_dssp CCEECSSCCCCCC-CCHHHHHHHHH---HTTCGGGSSCCCHHHHHHHHHHHHHHHHHHHSCCCCTTTSEEEESSHHHHHH
T ss_pred CEEeccCCCCCCC-CCHHHHHHHHH---HHhCCCcCCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCccEEEcCCcHHHHH
Confidence 4677774444455 23333322111 1111123445543 332 4555555555555763 4555666679987
Q ss_pred -HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-----CCHHHHHhhhCCCceEEEEeCCCCCCccccc-
Q 016612 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----CDLDEVASAIGPWTKLVWVESPTNPRQQICD- 157 (386)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~- 157 (386)
++.+++++||+|++++|+|+++. ..++..|.+++.++. .|++++++.+++++++|++++|+||||.+.+
T Consensus 102 ~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~ 177 (376)
T 2dou_A 102 HLLLALTEPEDLLLLPEVAYPSYF----GAARVASLRTFLIPLREDGLADLKAVPEGVWREAKVLLLNYPNNPTGAVADW 177 (376)
T ss_dssp HHHHHHCCTTCEEEEESSCCHHHH----HHHHHTTCEEEEECBCTTSSBCGGGSCHHHHHHEEEEEECSSCTTTCCCCCH
T ss_pred HHHHHhcCCCCEEEECCCCcHhHH----HHHHHcCCEEEEeeCCCCCCCCHHHHHHhhccCceEEEECCCCCCcCccCCH
Confidence 45557889999999999998886 344567888888875 3778888888778999999999999999986
Q ss_pred --HHHHHHHHHHcCCEEEEeCCCCCCCcc----CCCC----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh
Q 016612 158 --IRKIAEMAHAHGALLLVDNSIMSPVLS----RPLE----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (386)
Q Consensus 158 --l~~i~~la~~~~~~li~D~a~~~~~~~----~~~~----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~ 227 (386)
+++|.++|+++|+++|+|++|+..... .... .+.++++.|+||++ |.+|+|+|+++++ +++.+.+...
T Consensus 178 ~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~ 255 (376)
T 2dou_A 178 GYFEEALGLARKHGLWLIHDNPYVDQVYEGEAPSPLALPGAKERVVELFSLSKSY-NLAGFRLGFALGS-EEALARLERV 255 (376)
T ss_dssp HHHHHHHHHHHHTTCEEEEECTTGGGBSSSCCCCGGGSTTGGGTEEEEEEHHHHH-TCGGGCCEEEEEC-HHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCEEEEEccchhcccCCCCCChhhcCCCCCcEEEEecchhhc-CChhheeEEEecC-HHHHHHHHHH
Confidence 788999999999999999998753321 1121 25689999999999 4457899999986 5566666555
Q ss_pred hhhcCCCCChhhHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEE
Q 016612 228 QNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 303 (386)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 303 (386)
......+.+...+.++...++. +....+.+.++.+.+.+.+++. + .+. . ...+.+++
T Consensus 256 ~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~l~~~L~~~--~--------------~~~--~-~~~~~~~~ 316 (376)
T 2dou_A 256 KGVIDFNQYAGVLRMGVEALKTPKEVVRGYARVYRERALGMAEALKGV--L--------------SLL--P-PRATMYLW 316 (376)
T ss_dssp HHHHCCCSCHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHHTTT--S--------------EEC--C-CCBSSEEE
T ss_pred HHhcccCCCHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHh--c--------------Ccc--C-CCeeEEEE
Confidence 5444444566666655555543 2222333444445555555432 1 010 0 11244577
Q ss_pred EEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHH
Q 016612 304 FLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKA 380 (386)
Q Consensus 304 ~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~ 380 (386)
+.+++......+.+.+...|+.+.+|..+.. ..++++|||++. +++++.++.|+++
T Consensus 317 ~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~---------------------~~~~~~Ris~~~~~~~i~~~l~~l~~~ 374 (376)
T 2dou_A 317 GRLPEGVDDLEFGLRLVERGVALAPGRGFGP---------------------GGKGFVRIALVRPLEELLEAAKRIREA 374 (376)
T ss_dssp EECCTTCCHHHHHHHHHHTTEECEEGGGGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHHHT
T ss_pred EECCCCCCHHHHHHHHHHCCEEEcCchhhCC---------------------CCCCeEEEEecCCHHHHHHHHHHHHHH
Confidence 7775433345677777667888777654210 025679999975 4444445555444
No 48
>3aow_A Putative uncharacterized protein PH0207; protein-PLP-AKG triple complex, schiff-base linkage, kynuren aminotransferase; HET: PLP AKG; 1.56A {Pyrococcus horikoshii} PDB: 3aov_A* 3ath_A* 3av7_A* 1x0m_A 1wst_A*
Probab=99.96 E-value=1.5e-27 Score=227.45 Aligned_cols=295 Identities=14% Similarity=0.134 Sum_probs=200.5
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC---CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA---DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~---~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
..|+.. |.+ +++++.+++.+.+|. ++.+++++|++++. ++..++++||+|++++|+|+++. ..++..|.+
T Consensus 112 ~~Y~~~~g~~~lr~~ia~~~~~~~g~~~~~~v~~t~G~~~al~~~~~~l~~~Gd~Vlv~~p~y~~~~----~~~~~~g~~ 187 (448)
T 3aow_A 112 LQYGTTKGFTPLRETLMKWLGKRYGISQDNDIMITSGSQQALDLIGRVFLNPGDIVVVEAPTYLAAL----QAFNFYEPQ 187 (448)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCTTSEEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTCCE
T ss_pred hCCCCCCCcHHHHHHHHHHHHHhcCcCChhhEEEeCcHHHHHHHHHHHHcCCCCEEEEeCCChHHHH----HHHHHcCCE
Confidence 467765 665 777777777666676 35666666679997 45557899999999999999886 445568888
Q ss_pred EEEeCCC----CHHHHHhhhC----C--CceEEE-EeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc--
Q 016612 121 VKRVNTC----DLDEVASAIG----P--WTKLVW-VESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-- 184 (386)
Q Consensus 121 ~~~v~~~----d~~~l~~~~~----~--~~~~v~-~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-- 184 (386)
++.++.+ |+++|++.++ + ++++|+ +++|+||||.+.+ +++|.++|+++|++||+||+|+...+.
T Consensus 188 ~~~v~~~~~g~d~~~L~~~l~~~~~~~~~~k~v~~~~~~~NPtG~~~~~~~l~~i~~la~~~~~~lI~De~y~~~~~~g~ 267 (448)
T 3aow_A 188 YIQIPLDDEGMKVEILEEKLKELKSQGKKVKVVYTVPTFQNPAGVTMNEDRRKYLLELASEYDFIVVEDDPYGELRYSGN 267 (448)
T ss_dssp EEEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECSCTTCBCSSC
T ss_pred EEEeccCCCCCCHHHHHHHHhhhhccCCCCeEEEECCCCCCCcCCCCCHHHHHHHHHHHHHcCCEEEEECCCccccCCCC
Confidence 8888763 8999998886 5 789985 6899999999986 678999999999999999999754321
Q ss_pred ---CCC---CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc------HHH
Q 016612 185 ---RPL---ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MAL 252 (386)
Q Consensus 185 ---~~~---~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~ 252 (386)
... ..+.++++.|+||+++ +|+|+||++++ +.+.+.+.........+.+...+.++...++. +..
T Consensus 268 ~~~~~~~~~~~~~vi~~~S~SK~~~--~GlriG~v~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~~~~~~ 344 (448)
T 3aow_A 268 PEKKIKALDNEGRVIYLGTFSKILA--PGFRIGWMVGD-PGIIRKMEIAKQSTDLCTNVFGQVVAWRYVDGGYLEKHIPE 344 (448)
T ss_dssp CCCCTGGGCTTSCEEEEEESTTTTC--GGGCCEEEEEC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHTTHHHHHHHH
T ss_pred CCcCHHhcCCCCCEEEEccchhhcc--ccccEEEEEeC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHhCCHHHHHHH
Confidence 111 2256899999999995 58999999997 55666555444333333455555555443332 222
Q ss_pred HHHHHHHHHHHHHHHHhhC-CCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCc
Q 016612 253 RVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSV 331 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~ 331 (386)
..+.+.++.+.+.+.+++. +. ++ .+. . +..+.++++.++.......+.+.+...|+.+.+|..
T Consensus 345 ~~~~~~~~~~~l~~~L~~~~~~-------g~------~~~--~-p~~g~~~~v~~~~~~~~~~l~~~l~~~gV~v~pg~~ 408 (448)
T 3aow_A 345 IRKFYKPRRDAMLEALEEFMPE-------GV------KWT--K-PEGGMFIWVTLPDGIDSKKMLERAIKKGVAYVPGEA 408 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHCCT-------TC------EEC--C-CSBSSEEEEECSTTCCHHHHHHHHHHTTEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHHhCCC-------Ce------EEe--C-CCccEEEEEEcCCCCCHHHHHHHHHHCCcEEEcchh
Confidence 2333445555555666542 20 11 111 1 123567788886433356677777777888777654
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 332 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
+..- +..++++|+|++. +++++.+++|.+++++
T Consensus 409 f~~~-------------------~~~~~~iRls~~~~~~e~i~~~~~~L~~~l~~ 444 (448)
T 3aow_A 409 FYAH-------------------RDVKNTMRLNFTYVDEDKIMEGIKRLAETIKE 444 (448)
T ss_dssp GSTT-------------------CCCCSEEEEECSSSCTHHHHHHHHHHHHHHHH
T ss_pred hcCC-------------------CCCCCEEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 2100 1135789999974 6788888888888764
No 49
>1d2f_A MALY protein; aminotransferase fold, large PLP-binding domain, small C-TER domain, open alpha-beta structure., transferase; HET: PLP; 2.50A {Escherichia coli} SCOP: c.67.1.3
Probab=99.96 E-value=4.6e-28 Score=227.17 Aligned_cols=292 Identities=15% Similarity=0.175 Sum_probs=194.7
Q ss_pred ccccCCCCc-hHHHHHHHHHhhcC--C--CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 47 YDYTRSGNP-TRDALESLLAKLDK--A--DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 47 ~~y~~~g~~-~~~~l~~~l~~~~g--~--~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
..|.....+ +++++.+++.+.+| . ++.+++++|++++.+ +.+++++||+|++++|+|+++. ..++..|.+
T Consensus 59 ~~y~~~~~~~lr~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~~~~~g~~ 134 (390)
T 1d2f_A 59 FGYSRWKNDEFLAAIAHWFSTQHYTAIDSQTVVYGPSVIYMVSELIRQWSETGEGVVIHTPAYDAFY----KAIEGNQRT 134 (390)
T ss_dssp CCCCCSCCHHHHHHHHHHHHHHSCCCCCGGGEEEESCHHHHHHHHHHHSSCTTCEEEEEESCCHHHH----HHHHHTTCE
T ss_pred CCCCCCChHHHHHHHHHHHHHhcCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHHHH----HHHHHCCCE
Confidence 445543335 67777777777666 3 356666667799974 5557789999999999999886 344567888
Q ss_pred EEEeCC--------CCHHHHHhhhCC-CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 121 VKRVNT--------CDLDEVASAIGP-WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 121 ~~~v~~--------~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
++.++. .|++++++.+++ ++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+.....
T Consensus 135 ~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 214 (390)
T 1d2f_A 135 VMPVALEKQADGWFCDMGKLEAVLAKPECKIMLLCSPQNPTGKVWTCDELEIMADLCERHGVRVISDEIHMDMVWGEQPH 214 (390)
T ss_dssp EEEEECEECSSSEECCHHHHHHHHTSTTEEEEEEESSCTTTCCCCCTTHHHHHHHHHHHTTCEEEEECTTTTCBCSSSCC
T ss_pred EEEeecccCCCccccCHHHHHHHhccCCCeEEEEeCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCC
Confidence 888775 479999999985 8999999999999999987 899999999999999999999754321
Q ss_pred -CCCCC--Cc-cEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh-hcC-CCCChhhHHHHHhcCC----cHHHHH
Q 016612 185 -RPLEL--GA-DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEG-SGLAPFDCWICLRGVK----TMALRV 254 (386)
Q Consensus 185 -~~~~~--~~-di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~----~~~~~~ 254 (386)
+.... +. |. +.|+||++ |++|+|+|+++++++.+.+.+..... ... ...+...+.++...++ .+....
T Consensus 215 ~~~~~~~~~~~d~-~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~ 292 (390)
T 1d2f_A 215 IPWSNVARGDWAL-LTSGSKSF-NIPALTGAYGIIENSSSRDAYLSALKGRDGLSSPSVLALTAHIAAYQQGAPWLDALR 292 (390)
T ss_dssp CCGGGTCCSSEEE-EECSHHHH-TCGGGCCEEEEECSHHHHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHCHHHHHHHH
T ss_pred cCHHHcchhhHhh-ccCccHhh-cccChhheEEEECCHHHHHHHHHHHhhhcccCCCCHHHHHHHHHHHhcCHHHHHHHH
Confidence 11112 21 67 99999999 55678999999876667666655444 222 2445555544433332 122333
Q ss_pred HHHHHHHHHHHHHHhh-CCCcceEecCCCCCCCchhhhhhccCCCCce-EEEEeCCH-HhHHHHHhhcC-cceeccCCCC
Q 016612 255 EKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSV-LSFLTGSL-ALSKHVVETTK-YFSITVSFGS 330 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-~~~~~~~~-~~~~~l~~~l~-~~gi~~~~G~ 330 (386)
+...++.+.+.+.+++ .+ ++... .+.+++ +++.++.. ....++.+.+. ..|+.+.+|.
T Consensus 293 ~~~~~~~~~l~~~L~~~~~--------~~~~~----------~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~ 354 (390)
T 1d2f_A 293 IYLKDNLTYIADKMNAAFP--------ELNWQ----------IPQSTYLAWLDLRPLNIDDNALQKALIEQEKVAIMPGY 354 (390)
T ss_dssp HHHHHHHHHHHHHHHHHCS--------SCCCC----------CCSBCSEEEEECGGGCCCHHHHHHHHHHTTCEECEEGG
T ss_pred HHHHHHHHHHHHHHHhhCC--------CCEEe----------cCCccEEEEEEccccCCCHHHHHHHHHHHcCEEeeCcc
Confidence 4445555566666654 32 22111 123344 45676532 23566777776 5788887765
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
.+.. ..++++|||++. +++++.++.|.+++++
T Consensus 355 ~f~~---------------------~~~~~~Ris~~~~~~~l~~~l~~l~~~l~~ 388 (390)
T 1d2f_A 355 TYGE---------------------EGRGFVRLNAGCPRSKLEKGVAGLINAIRA 388 (390)
T ss_dssp GGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred ccCC---------------------CCCCeEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 4210 025679999975 5566667777776654
No 50
>1bs0_A Protein (8-amino-7-oxonanoate synthase); PLP-dependent acyl-COA synthase, biotin biosynthesis, 8-AMIN oxonanoate synthase; 1.65A {Escherichia coli} SCOP: c.67.1.4 PDB: 2g6w_A* 1dje_A* 1dj9_A*
Probab=99.96 E-value=1.7e-27 Score=222.83 Aligned_cols=281 Identities=15% Similarity=0.155 Sum_probs=198.7
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHH
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVA 133 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 133 (386)
+...++++.+++++|.++.+++++|++++. ++..++++||.|++++|.|+++.. .++..|.+++.++..|+++++
T Consensus 84 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~~~~~~~~~gd~v~~~~~~~~~~~~----~~~~~g~~~~~~~~~d~~~l~ 159 (384)
T 1bs0_A 84 VVHQALEEELAEWLGYSRALLFISGFAANQAVIAAMMAKEDRIAADRLSHASLLE----AASLSPSQLRRFAHNDVTHLA 159 (384)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCCHHHHH----HHHTSSSEEEEECTTCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCcEEEEcccccHHHHH----HHHHcCCCEEEeCCCCHHHHH
Confidence 478899999999999988999999998876 556678999999999999988753 445679999999988999999
Q ss_pred hhhCC---CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-------CCCCCCccEEEeccccccc
Q 016612 134 SAIGP---WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 134 ~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-------~~~~~~~di~~~S~sK~~~ 203 (386)
+.+++ +++++++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.+. .....+.|++++|+||+++
T Consensus 160 ~~l~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~di~~~s~sK~~~ 239 (384)
T 1bs0_A 160 RLLASPCPGQQMVVTEGVFSMDGDSAPLAEIQQVTQQHNGWLMVDDAHGTGVIGEQGRGSCWLQKVKPELLVVTFGKGFG 239 (384)
T ss_dssp HHHHSCCSSCEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSSGGGCCHHHHTTCCCSEEEEESSSTTS
T ss_pred HHHHhcCCCCeEEEEeCCCCCCCCccCHHHHHHHHHHcCcEEEEECCcccceecCCCCchHHhcCCCCcEEEeeccchhh
Confidence 98864 3789999999999999999999999999999999999999766432 1122357999999999995
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhh--hhcCCCCChhhHHHHHhcCCcHH-----HHHHHHHHHHHHHHHHHhhCCCcce
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQ--NAEGSGLAPFDCWICLRGVKTMA-----LRVEKQQDNAQKIAEFLASHPRVKK 276 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~l~~~l~~~~~~~~ 276 (386)
++| |+++++ +++.+.+.... ...+...++..+.++..+++.+. ...++..++.+.+.+.|++..
T Consensus 240 -~~G---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---- 310 (384)
T 1bs0_A 240 -VSG---AAVLCS-STVADYLLQFARHLIYSTSMPPAQAQALRASLAVIRSDEGDARREKLAALITRFRAGVQDLP---- 310 (384)
T ss_dssp -SCC---EEEEEC-HHHHHHHHHHCHHHHSSBCCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTSS----
T ss_pred -ccC---cEEEeC-HHHHHHHHHhchhhhcCCCCCHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHhcC----
Confidence 554 999986 55655554432 22223456655555444443322 333444555555555555431
Q ss_pred EecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 277 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 277 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+.+. ...++++++.+++.....++.+.+...|+.+.+|.... . ..
T Consensus 311 -----------~~~~----~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~---~-----------------~~ 355 (384)
T 1bs0_A 311 -----------FTLA----DSCSAIQPLIVGDNSRALQLAEKLRQQGCWVTAIRPPT---V-----------------PA 355 (384)
T ss_dssp -----------CEEC----SCCSSBCCEEEESHHHHHHHHHHHHHTTEECCEECTTS---S-----------------CT
T ss_pred -----------Cccc----CCCCCEEEEEeCCHHHHHHHHHHHHHCCcEEEeecCCC---C-----------------CC
Confidence 1111 12456777777654556778888877788877655311 0 01
Q ss_pred CCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 357 TEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 357 ~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.++++||+++....++.++.+.++|++
T Consensus 356 ~~~~~Ri~~~~~~~~~~i~~~~~~l~~ 382 (384)
T 1bs0_A 356 GTARLRLTLTAAHEMQDIDRLLEVLHG 382 (384)
T ss_dssp TCEEECCBCCTTCCHHHHHHHHHHHHH
T ss_pred CCceEEEEEcCCCCHHHHHHHHHHHHh
Confidence 246799999865555555555555543
No 51
>3jtx_A Aminotransferase; NP_283882.1, structural genomics, joint CE structural genomics, JCSG, protein structure initiative; HET: LLP MES; 1.91A {Neisseria meningitidis Z2491}
Probab=99.96 E-value=8e-28 Score=225.91 Aligned_cols=325 Identities=16% Similarity=0.128 Sum_probs=211.2
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC-----C-ceEEeCcHHH
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA-----D-RALCFTSGMA 81 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~-~~i~~~~gt~ 81 (386)
....++++.+...++ .++.+.++. .. .. .....|... |.+ +++++.+++.+.+|. + +.+++++|++
T Consensus 29 g~~~i~l~~~~~~~~-~~~~v~~a~--~~-~~--~~~~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~~i~~t~g~~~ 102 (396)
T 3jtx_A 29 GMEAVPLHIGEPKHP-TPKVITDAL--TA-SL--HELEKYPLTAGLPELRQACANWLKRRYDGLTVDADNEILPVLGSRE 102 (396)
T ss_dssp TCCCEECSCCSCCSC-CCHHHHHHH--HH-TG--GGGGSCCCTTCCHHHHHHHHHHHHHHTTTCCCCTTTSEEEESSHHH
T ss_pred CCCeEEeCCcCCCCC-CCHHHHHHH--HH-Hh--hhccCCCCCCCcHHHHHHHHHHHHHhcCCCCCCCCCeEEEcCCcHH
Confidence 356788885544444 233333221 11 11 134567766 665 899999999887773 3 5666666679
Q ss_pred HHHH-HHHhcCCC-----CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCC
Q 016612 82 ALAA-VTHLLGTG-----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 82 al~~-~~~~~~~g-----~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
++.+ +..++++| |+|++++|+|+++. ..++..|.+++.++.+ |++++++++++++++|++++|+
T Consensus 103 al~~~~~~~~~~g~~~~~d~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~g~~~d~~~l~~~~~~~~~~v~l~~p~ 178 (396)
T 3jtx_A 103 ALFSFVQTVLNPVSDGIKPAIVSPNPFYQIYE----GATLLGGGEIHFANCPAPSFNPDWRSISEEVWKRTKLVFVCSPN 178 (396)
T ss_dssp HHHHHHHHHCCC---CCCCEEEEEESCCHHHH----HHHHHTTCEEEEEECCTTTCCCCGGGSCHHHHHTEEEEEEESSC
T ss_pred HHHHHHHHHhCCCCccCCCEEEEcCCCcHhHH----HHHHHcCCEEEEeecCCCCCccCHHHHHHhhccCcEEEEEECCC
Confidence 9874 55678886 79999999998875 4456788898888753 7788888888899999999999
Q ss_pred CCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC--CC-----------CCCccEEEeccccccccCCCceEEEE
Q 016612 150 NPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR--PL-----------ELGADIVMHSATKFIAGHSDVMAGVL 213 (386)
Q Consensus 150 nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~--~~-----------~~~~di~~~S~sK~~~g~~g~~~G~i 213 (386)
||||.+.+ +++|.++|+++|+++|+||+|+...... +. ..+.++++.|+||.+ +.+|+|+||+
T Consensus 179 nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~ 257 (396)
T 3jtx_A 179 NPSGSVLDLDGWKEVFDLQDKYGFIIASDECYSEIYFDGNKPLGCLQAAAQLGRSRQKLLMFTSLSKRS-NVPGLRSGFV 257 (396)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHCCEEEEECTTTTCCSTTCCCCCHHHHHHHTTCCCTTEEEEEESTTTS-SCGGGCCEEE
T ss_pred CCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCCchHHhhhhhcccccCcEEEEecccccc-CCcccceEEE
Confidence 99999987 5559999999999999999997533221 11 256789999999988 4567899999
Q ss_pred EEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC---cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhh
Q 016612 214 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK---TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 290 (386)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i 290 (386)
+++ +++.+.+.......+...+...+.++...++ .+....+.+.++.+.+.+.+++.. . +
T Consensus 258 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~----------~------~ 320 (396)
T 3jtx_A 258 AGD-AELLKNFLLYRTYHGSAMSIPVQRASIAAWDDEQHVIDNRRLYQEKFERVIPILQQVF----------D------V 320 (396)
T ss_dssp EEC-HHHHHHHHHHHHHHTCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHTTTS----------C------C
T ss_pred EeC-HHHHHHHHHHHhhcccCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHhcC----------C------c
Confidence 886 5566666655555555666666655544432 233334444555555555555321 0 0
Q ss_pred hhhccCCCCceEEEEeCCHHhHHHHHhhc-CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--
Q 016612 291 HYSQAKGAGSVLSFLTGSLALSKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 367 (386)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l-~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 367 (386)
. . ...+.++++.++.. ....+.+.+ +..|+.+.+|..+..-... ....++++|||++.
T Consensus 321 ~--~-~~~~~~~~~~~~~~-~~~~~~~~l~~~~gi~v~~g~~~~~~~~~---------------~~~~~~~iRis~~~~~ 381 (396)
T 3jtx_A 321 K--L-PDASFYIWLKVPDG-DDLAFARNLWQKAAIQVLPGRFLARDTEQ---------------GNPGEGYVRIALVADV 381 (396)
T ss_dssp C--C-CSSSSEEEEECTTS-CHHHHHHHHHHHHCEECEEGGGGCCCCTT---------------CCTTTTEEEEECCSCH
T ss_pred c--C-CCeeEEEEEECCCC-CHHHHHHHHHHHCCEEEeCChHhCCcccc---------------cCCCCCeEEEEEcCCH
Confidence 0 1 12356777777642 244555555 4458888777653211000 01236889999975
Q ss_pred CChHHHHHHHHHHH
Q 016612 368 EDVNDLISDLDKAL 381 (386)
Q Consensus 368 ~~~~~~i~~l~~~l 381 (386)
+++++.++.|++++
T Consensus 382 ~~i~~~l~~l~~~l 395 (396)
T 3jtx_A 382 ATCVKAAEDIVSLY 395 (396)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHh
Confidence 55666666666654
No 52
>1c7n_A Cystalysin; transferase, aminotransferase, pyridoxal phosphate; HET: PLP; 1.90A {Treponema denticola} SCOP: c.67.1.3 PDB: 1c7o_A*
Probab=99.96 E-value=3.8e-27 Score=221.52 Aligned_cols=292 Identities=14% Similarity=0.155 Sum_probs=198.6
Q ss_pred ccccCCCCc-hHHHHHHHHHhhcC--C--CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 47 YDYTRSGNP-TRDALESLLAKLDK--A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 47 ~~y~~~g~~-~~~~l~~~l~~~~g--~--~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
..|... .+ +++++.+++.+.+| . ++.+++++|++++. ++.+++++||+|++++|+|+++. ..++..|.+
T Consensus 62 ~~y~~~-~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~a~~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g~~ 136 (399)
T 1c7n_A 62 LGYTGP-TEEYKKTVKKWMKDRHQWDIQTDWIINTAGVVPAVFNAVREFTKPGDGVIIITPVYYPFF----MAIKNQERK 136 (399)
T ss_dssp CSSBCC-CHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEECSSCCTHHH----HHHHTTTCE
T ss_pred CCCCCC-cHHHHHHHHHHHHHHhCCCCChhhEEEcCCHHHHHHHHHHHhcCCCCEEEEcCCCcHhHH----HHHHHcCCE
Confidence 445543 33 67777777777667 3 35666677789987 45557889999999999999986 444567888
Q ss_pred EEEeCC--------CCHHHHHhhhC-CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 121 VKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 121 ~~~v~~--------~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
++.++. .|++++++.++ +++++|++++|+||||.+.| +++|.++|+++|+++|+||+|+.....
T Consensus 137 ~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 216 (399)
T 1c7n_A 137 IIECELLEKDGYYTIDFQKLEKLSKDKNNKALLFCSPHNPVGRVWKKDELQKIKDIVLKSDLMLWSDEIHFDLIMPGYEH 216 (399)
T ss_dssp EEECCCEEETTEEECCHHHHHHHHTCTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHSSCEEEEECTTTTCBCTTCCC
T ss_pred EEecccccCCCCEEEcHHHHHHHhccCCCcEEEEcCCCCCCCcCcCHHHHHHHHHHHHHcCCEEEEEccccccccCCCCc
Confidence 888875 37899999998 78999999999999999998 999999999999999999999753321
Q ss_pred -CCCC-----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC-CCChhhHHHHHhcCC----cHHHH
Q 016612 185 -RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVK----TMALR 253 (386)
Q Consensus 185 -~~~~-----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~----~~~~~ 253 (386)
.... .+.++++.|+||++ |++|+|+|+++++++++.+.+.......+. +.+...+.++...++ .+...
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 295 (399)
T 1c7n_A 217 TVFQSIDEQLADKTITFTAPSKTF-NIAGMGMSNIIIKNPDIRERFTKSRDATSGMPFTTLGYKACEICYKECGKWLDGC 295 (399)
T ss_dssp CCGGGSCHHHHTTEEEEECSHHHH-TCGGGCCEEEECCCHHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccHHHcCccccCcEEEEEeChhhc-cccchheEEEEECCHHHHHHHHHHHhhcccCCCCHHHHHHHHHHHhCChHHHHHH
Confidence 1111 24579999999999 445789999999766676666555444332 345555554444332 12333
Q ss_pred HHHHHHHHHHHHHHHhh-CCCcceEecCCCCCCCchhhhhhccCCCCceE-EEEeCCH-HhHHHHHhhcC-cceeccCCC
Q 016612 254 VEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL-SFLTGSL-ALSKHVVETTK-YFSITVSFG 329 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~l~~~l~-~~gi~~~~G 329 (386)
.+...++.+.+.+.+++ .+ ++... .+.++++ ++.++.. .....+.+.+. ..|+.+.+|
T Consensus 296 ~~~~~~~~~~l~~~L~~~~~--------~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g 357 (399)
T 1c7n_A 296 IKVIDKNQRIVKDFFEVNHP--------EIKAP----------LIEGTYLQWIDFRALKMDHKAMEEFMIHKAQIFFDEG 357 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHCT--------TSBCC----------CCSBSSEEEEECGGGCCCHHHHHHHHHHTTCCCCEEG
T ss_pred HHHHHHHHHHHHHHHHhhCC--------CCeEe----------cCCceEEEEEEcccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 34455556666666655 32 12111 1233444 5677532 23556777775 678887776
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
..+. + ..++++|||++. +++++.++.|.+++++
T Consensus 358 ~~~~----~-----------------~~~~~iRis~~~~~~~l~~~l~~l~~~l~~ 392 (399)
T 1c7n_A 358 YIFG----D-----------------GGIGFERINLAAPSSVIQESLERLNKALKD 392 (399)
T ss_dssp GGGC----G-----------------GGTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred cccC----C-----------------CCCCeEEEEeccCHHHHHHHHHHHHHHHHH
Confidence 5421 0 025679999975 5677777777777754
No 53
>3dyd_A Tyrosine aminotransferase; PLP, SGC, structural genomics, structural genomics consortium, disease mutation, phenylalani catabolism; HET: PLP; 2.30A {Homo sapiens} PDB: 3pdx_A*
Probab=99.96 E-value=1e-27 Score=227.43 Aligned_cols=288 Identities=15% Similarity=0.091 Sum_probs=192.1
Q ss_pred ccccCC-CCchHHHHHHHHHhhcC-------CCceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 47 YDYTRS-GNPTRDALESLLAKLDK-------ADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 47 ~~y~~~-g~~~~~~l~~~l~~~~g-------~~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
..|... |.+ ++++.++++++ .++.+++++|++|+.. +..++++||+|++++|+|.++. ..++..
T Consensus 90 ~~y~~~~g~~---~lr~~la~~~~~~~~~~~~~~v~~t~g~t~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~ 162 (427)
T 3dyd_A 90 NGYAPSIGFL---SSREEIASYYHCPEAPLEAKDVILTSGCSQAIDLCLAVLANPGQNILVPRPGFSLYK----TLAESM 162 (427)
T ss_dssp SSCCCTTCCH---HHHHHHHHHHCBTTBCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTHHH----HHHHHT
T ss_pred CCCCCCCCcH---HHHHHHHHHHhhcCCCCChHHEEEecCcHHHHHHHHHHhcCCCCEEEEcCCCchhHH----HHHHHc
Confidence 456554 544 44455555544 2367777788899974 5557889999999999999885 455678
Q ss_pred CcEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 118 GVVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
|.+++.++.. |++++++.++++++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 163 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~~i~Deay~~~~~~g~~ 242 (427)
T 3dyd_A 163 GIEVKLYNLLPEKSWEIDLKQLEYLIDEKTACLIVNNPSNPCGSVFSKRHLQKILAVAARQCVPILADEIYGDMVFSDCK 242 (427)
T ss_dssp TCEEEEEEEEGGGTTEECHHHHHSSCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTTTCBCSSCC
T ss_pred CCEEEEEecccccCCCCCHHHHHHHhccCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEcCchhhccCCCc
Confidence 8888887652 899999999989999999999999999998 999999999999999999999753221
Q ss_pred --CCCCCC---ccEEEeccccccccCCCceEEEEEEcC------hhHHHHHHHhhhhcCCCCChhhHHHHHhcCC-----
Q 016612 185 --RPLELG---ADIVMHSATKFIAGHSDVMAGVLAVKG------ERLAKELYFLQNAEGSGLAPFDCWICLRGVK----- 248 (386)
Q Consensus 185 --~~~~~~---~di~~~S~sK~~~g~~g~~~G~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 248 (386)
.....+ ..++++|+||.++ .+|+|+|++++++ +.+.+.+...... ..+.+...+.++...++
T Consensus 243 ~~~~~~~~~~~~vi~~~S~sK~~~-~~G~riG~~~~~~~~~~~~~~i~~~l~~~~~~-~~~~~~~~~~a~~~~L~~~~~~ 320 (427)
T 3dyd_A 243 YEPLATLSTDVPILSCGGLAKRWL-VPGWRLGWILIHDRRDIFGNEIRDGLVKLSQR-ILGPCTIVQGALKSILCRTPGE 320 (427)
T ss_dssp CCCGGGGCSSCCEEEEEESTTTSS-CGGGCCEEEEEECSTTSSHHHHHHHHHHHHHH-HCCSCHHHHHHHHHHHHHSCHH
T ss_pred CccHHHhCCCCcEEEEeeccccCC-CcCcceEEEEecCcchhhHHHHHHHHHHHHhc-cCCCCHHHHHHHHHHHHhcCHH
Confidence 111122 2478899999984 4678999999975 3455444443322 23445555544443332
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----HhHHHHHhhc-Ccc
Q 016612 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVVETT-KYF 322 (386)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~l~~~l-~~~ 322 (386)
.+....++..++.+.+.+.|++.+.+ .+. . +..+.++++.++.. .....+.+.+ ...
T Consensus 321 ~~~~~~~~~~~~~~~l~~~L~~~~g~--------------~~~--~-p~~g~~~~~~l~~~~~~~~~~~~~~~~~l~~~~ 383 (427)
T 3dyd_A 321 FYHNTLSFLKSNADLCYGALAAIPGL--------------RPV--R-PSGAMYLMVGIEMEHFPEFENDVEFTERLVAEQ 383 (427)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSTTE--------------EEE--C-CSBTTEEEEEECGGGCTTCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc--------------eec--C-CCeeEEEEEecCHhhcCCCCCHHHHHHHHHHHC
Confidence 23344455556666666666654321 111 0 11244556566421 2244555555 366
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
|+.+.+|..+. .++++|||++. +++++.++.|.+++++
T Consensus 384 gV~v~~g~~~~-----------------------~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 423 (427)
T 3dyd_A 384 SVHCLPATCFE-----------------------YPNFIRVVITVPEVMMLEACSRIQEFCEQ 423 (427)
T ss_dssp CEECEEGGGGT-----------------------CTTEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred CEEEECCcccC-----------------------CCCeEEEEECCCHHHHHHHHHHHHHHHHH
Confidence 88777765421 25679999973 6778888888888764
No 54
>3h14_A Aminotransferase, classes I and II; YP_167802.1, SPO258 structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.90A {Silicibacter pomeroyi dss-3}
Probab=99.96 E-value=2.4e-27 Score=222.35 Aligned_cols=293 Identities=16% Similarity=0.148 Sum_probs=198.6
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.+ +++++.+++.+.+|. ++.+++++|++++. ++..++++||+|++++|+|+++. ..++..|
T Consensus 61 ~~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~g 136 (391)
T 3h14_A 61 ALGYTVALGLPALRQRIARLYGEWYGVDLDPGRVVITPGSSGGFLLAFTALFDSGDRVGIGAPGYPSYR----QILRALG 136 (391)
T ss_dssp --------CCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHHTT
T ss_pred CCCCCCCCChHHHHHHHHHHHHHHhCCCCCHHHEEEecChHHHHHHHHHHhcCCCCEEEEcCCCCccHH----HHHHHcC
Confidence 3567765 655 788888888877663 35677777789987 45667899999999999998886 4456788
Q ss_pred cEEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 119 VVVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 119 ~~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
.+++.++.+ |++++++. ++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 137 ~~~~~v~~~~~~~~~~d~~~l~~~---~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~ 213 (391)
T 3h14_A 137 LVPVDLPTAPENRLQPVPADFAGL---DLAGLMVASPANPTGTMLDHAAMGALIEAAQAQGASFISDEIYHGIEYEAKAV 213 (391)
T ss_dssp CEEEEEECCGGGTTSCCHHHHTTS---CCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCC
T ss_pred CEEEEeecCcccCCCCCHHHHHhc---CCeEEEECCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEECcchhcccCCCCc
Confidence 999888864 77888776 7899999999999999987 889999999999999999999753321
Q ss_pred CCCC-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHH
Q 016612 185 RPLE-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDN 260 (386)
Q Consensus 185 ~~~~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~ 260 (386)
.... .+.+++++|+||++ |++|+|+|++++++ .+.+.+...........+...+.++...++. +....+...++
T Consensus 214 ~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 291 (391)
T 3h14_A 214 TALELTDECYVINSFSKYF-SMTGWRVGWMVVPE-DQVRVVERIAQNMFICAPHASQVAALAALDCDAELQANLDVYKAN 291 (391)
T ss_dssp CGGGTCSSSEEEEESSSTT-CCTTSCCEEEECCG-GGHHHHHHHHHHTTCCCCHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred ChhhcCCCEEEEEechhcc-CCccceeEEEEeCH-HHHHHHHHHHhhhccCCCHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 1112 25679999999999 55688999999874 4666666555555555666666555444442 33344455556
Q ss_pred HHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCc-ceeccCCCCcccccccc
Q 016612 261 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKY-FSITVSFGSVKSLISMP 338 (386)
Q Consensus 261 ~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~-~gi~~~~G~~~~~~~~p 338 (386)
.+.+.+.+++.+. ... . . ...+.++++.++. ......+.+.+.. .|+.+.+|..+..
T Consensus 292 ~~~l~~~l~~~~~---------~~~-----~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~~---- 350 (391)
T 3h14_A 292 RKLMLERLPKAGF---------TRI-----A--P-PDGAFYVYADVSDLTDDSRAFAAEILEKAGVAVTPGLDFDP---- 350 (391)
T ss_dssp HHHHHHHHHHHTC---------CCB-----C--C-CCBTTEEEEECTTTCSCHHHHHHHHHHHHCEECEEGGGTCT----
T ss_pred HHHHHHHHHHcCC---------Ccc-----c--C-CCeeEEEEEecCccCCCHHHHHHHHHHHCCEEEcCchhhCC----
Confidence 6666666665421 000 0 0 1123455666643 2235566666554 4888877765321
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
+..++++|+|++. +++++.++.|++++++.
T Consensus 351 ----------------~~~~~~iRis~~~~~~~i~~~l~~l~~~~~~~ 382 (391)
T 3h14_A 351 ----------------ERGAGTLRFSYARATADIEEGLDRLEAFMQAR 382 (391)
T ss_dssp ----------------TTGGGEEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred ----------------CCCCCeEEEEecCCHHHHHHHHHHHHHHHHHh
Confidence 0125779999975 67777888888887654
No 55
>3isl_A Purine catabolism protein PUCG; pyridoxalphosphate, PLP dependent enzymes, purine metabolism transaminases, aminotransferases; HET: PLP; 2.06A {Bacillus subtilis}
Probab=99.96 E-value=3.7e-28 Score=229.63 Aligned_cols=287 Identities=15% Similarity=0.114 Sum_probs=199.3
Q ss_pred chHHHHHHHHHhhcCCCc--eE-EeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKADR--AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~--~i-~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+..+++++++++++|.+. .+ ++++|++++. ++.+++++||+|+++++.|++.. +...++..|.+++.++.+
T Consensus 44 ~~~~~l~~~la~~~g~~~~~~~~~~~s~t~al~~~~~~l~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 121 (416)
T 3isl_A 44 GIMNETMEMLRELFQTKNRWAYPIDGTSRAGIEAVLASVIEPEDDVLIPIYGRFGYL--LTEIAERYGANVHMLECEWGT 121 (416)
T ss_dssp HHHHHHHHHHHHHTTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEecCcHHHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHhcCCeeEEEecCCCC
Confidence 468899999999999873 33 5567789987 55667999999999999997732 235677889999998875
Q ss_pred --CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 --DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 --d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|+++++++++ +++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... +....+.|++++|+||++.
T Consensus 122 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~l~ 201 (416)
T 3isl_A 122 VFDPEDIIREIKKVKPKIVAMVHGETSTGRIHPLKAIGEACRTEDALFIVDAVATIGGCEVKVDEWKIDAAIGGTQKCLS 201 (416)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCHHHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSSTTC
T ss_pred CCCHHHHHHHHhhCCCcEEEEEccCCCCceecCHHHHHHHHHHcCCEEEEECCccccCCCcchhhcCCCEEEecCccccC
Confidence 8999999998 68999999999999999999999999999999999999999877653 3344578999999999977
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhh------------------------------------h-hc-CCCCChhhHHHHHh
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQ------------------------------------N-AE-GSGLAPFDCWICLR 245 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~------------------------------------~-~~-~~~~~~~~~~~~~~ 245 (386)
|+.| +|++++++ ++.+.+.... . .. ....+......+..
T Consensus 202 g~~g--~g~~~~~~-~~~~~~~~~~~~~~Gw~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 278 (416)
T 3isl_A 202 VPSG--MAPITYNE-RVADVIAARKKVERGIATQADRAALSGNRPITSNYFDLSQLEDYWSERRLNHHTEATTMLYALRE 278 (416)
T ss_dssp CCSS--EEEEEECH-HHHHHHHTC------------------CCCCSCSTTCHHHHHHHTSTTCCCSSCCCHHHHHHHHH
T ss_pred CCCC--eEEEEECH-HHHHHhhccccccccccccccchhccCCCCCCccccchHHHHhhhcccCCCCCCCCHHHHHHHHH
Confidence 7776 79998874 4544443211 0 00 11222222222222
Q ss_pred cCCc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC
Q 016612 246 GVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 320 (386)
Q Consensus 246 ~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 320 (386)
+++. +....++..++.+.+.+.|++. ++. ++.......+.++++.+++.....++.+.+.
T Consensus 279 al~~~~~~g~~~~~~~~~~~~~~l~~~L~~~---------g~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 343 (416)
T 3isl_A 279 GVRLVLEEGLETRFERHRHHEAALAAGIKAM---------GLR------LFGDDSCKMPVVTCVEIPGGIDGESVRDMLL 343 (416)
T ss_dssp HHHHHHHHCHHHHHHHHHHHHHHHHHHHHHT---------TCC------BCSCGGGBCTTEEEEECCTTCCHHHHHHHHH
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHHHHHHc---------CCE------eccCccccCCcEEEEeCCCCCCHHHHHHHHH
Confidence 2222 2334444555555666666542 111 1111111235778888854334667777776
Q ss_pred cc-eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCC-hHHHHHHHHHHHhcC
Q 016612 321 YF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IED-VNDLISDLDKALRTG 384 (386)
Q Consensus 321 ~~-gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~-~~~~i~~l~~~l~~~ 384 (386)
.. |+.+++|.. ...++++|++++ .++ ++++++.|++++++.
T Consensus 344 ~~~gi~v~~g~~-----------------------~~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~~~~~ 390 (416)
T 3isl_A 344 AQFGIEIASSFG-----------------------PLAGKIWRIGTMGYSCRKENVLFVLAGLEAVLLRH 390 (416)
T ss_dssp HHHCEECBCCCS-----------------------TTTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred HhCCEEEecCCC-----------------------CCCCCEEEEecccCCCcHHHHHHHHHHHHHHHHHc
Confidence 55 888776642 123678999993 345 889999999988765
No 56
>2dr1_A PH1308 protein, 386AA long hypothetical serine aminotransferase; PLP, structural genomics, NPPSFA; HET: PLP; 1.90A {Pyrococcus horikoshii}
Probab=99.96 E-value=1.2e-27 Score=223.89 Aligned_cols=287 Identities=14% Similarity=0.134 Sum_probs=201.5
Q ss_pred CchHHHHHHHHHhhcCCC--c-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC---
Q 016612 54 NPTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--- 126 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~--~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--- 126 (386)
.++++++++++++++|.+ + .+++++|++|+. ++.+++++||+|++++|+|++.. +...++..|.+++.++.
T Consensus 52 ~~~~~~~~~~la~~~g~~~~~~v~~~~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (386)
T 2dr1_A 52 RKVHMDTVERLREFLEVEKGEVLLVPSSGTGIMEASIRNGVSKGGKVLVTIIGAFGKR--YKEVVESNGRKAVVLEYEPG 129 (386)
T ss_dssp HHHHHHHHHHHHHHHTCSSSEEEEESSCHHHHHHHHHHHHSCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTT
T ss_pred HHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHHHhhcCCCeEEEEcCCchhHH--HHHHHHHhCCceEEEecCCC
Confidence 357899999999999986 5 445667779987 45557899999999999998721 13556678899988886
Q ss_pred --CCHHHHHhhh--CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 127 --CDLDEVASAI--GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 127 --~d~~~l~~~~--~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
.|++++++.+ .+++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... +....++|++++|+||+
T Consensus 130 ~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK~ 209 (386)
T 2dr1_A 130 KAVKPEDLDDALRKNPDVEAVTITYNETSTGVLNPLPELAKVAKEHDKLVFVDAVSAMGGADIKFDKWGLDVVFSSSQKA 209 (386)
T ss_dssp CCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEEEETTST
T ss_pred CCCCHHHHHHHHhcCCCCcEEEEEeecCCcchhCCHHHHHHHHHHcCCeEEEEccccccCccccccccCCcEEEEecccc
Confidence 4899999998 578999999999999999999999999999999999999999876643 33345789999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHH----------------Hhh--hhcCCCCChhhHHHHHhcCCc------HHHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELY----------------FLQ--NAEGSGLAPFDCWICLRGVKT------MALRVEKQ 257 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~----------------~~~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 257 (386)
++++.| +|++++++ .+.+.+. ... .......+...+.++..+++. +....++.
T Consensus 210 ~~~~~g--~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~g~~~~~~~~~ 286 (386)
T 2dr1_A 210 FGVPPG--LAIGAFSE-RFLEIAEKMPERGWYFDIPLYVKYLKEKESTPSTPPMPQVFGINVALRIIEKMGGKEKWLEMY 286 (386)
T ss_dssp TCCCSS--CEEEEECH-HHHHHHTTCTTCCSTTCHHHHHHHHHHHSSCSSCCCHHHHHHHHHHHHHHHHTTCHHHHHHHH
T ss_pred ccCCCc--eEEEEECH-HHHHHHhcCCCCceEEeHHHHHHhhccCCCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHH
Confidence 987755 79999875 4544331 111 112223444444444433332 33445556
Q ss_pred HHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccc
Q 016612 258 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISM 337 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~ 337 (386)
.++.+.+.+.|++. . ++-.. +.....+.++++.++......++.+.+...|+.+.+|...
T Consensus 287 ~~~~~~l~~~L~~~-g--------~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~----- 346 (386)
T 2dr1_A 287 EKRAKMVREGVREI-G--------LDILA------EPGHESPTITAVLTPPGIKGDEVYEAMRKRGFELAKGYGS----- 346 (386)
T ss_dssp HHHHHHHHHHHHHT-T--------CCBSS------CTTCBCSSEEEEECCTTCCHHHHHHHHHHTTEECEECCGG-----
T ss_pred HHHHHHHHHHHHHc-C--------CeeCc------CccccCCceEEEEcCCCCCHHHHHHHHHHCCeEEecCccc-----
Confidence 66677777777654 1 11110 0001146788888864334667777777778877766531
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 338 PCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 338 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
..++++||+++. ++++++++.|++++++
T Consensus 347 ------------------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 378 (386)
T 2dr1_A 347 ------------------VKEKTFRIGHMGYMKFEDIQEMLDNLREVINE 378 (386)
T ss_dssp ------------------GTTTEEEEECCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------cCCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 025679999973 7777888888877764
No 57
>2o1b_A Aminotransferase, class I; aminotrasferase; HET: PLP; 1.95A {Staphylococcus aureus}
Probab=99.96 E-value=4.2e-28 Score=228.46 Aligned_cols=292 Identities=15% Similarity=0.097 Sum_probs=197.6
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCCC-----ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
..|... |.+ +++++.+++++.+|.+ +.+++++|++++. ++..++++||+|++++|+|+++.. .++..|
T Consensus 79 ~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~~----~~~~~g 154 (404)
T 2o1b_A 79 QKYGAFHGKEAFKQAIVDFYQRQYNVTLDKEDEVCILYGTKNGLVAVPTCVINPGDYVLLPDPGYTDYLA----GVLLAD 154 (404)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCSSHHH----HHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhCCCCCCcccEEEcCCcHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHCC
Confidence 356664 554 6777777777766753 4555666678987 455578899999999999999864 445678
Q ss_pred cEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----C
Q 016612 119 VVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (386)
Q Consensus 119 ~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~ 185 (386)
.+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|++||+|++|+...+. +
T Consensus 155 ~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~ 234 (404)
T 2o1b_A 155 GKPVPLNLEPPHYLPDWSKVDSQIIDKTKLIYLTYPNNPTGSTATKEVFDEAIAKFKGTDTKIVHDFAYGAFGFDAKNPS 234 (404)
T ss_dssp CEEEEEECCTTTCCCCGGGSCHHHHHHEEEEEECSSCTTTCCCCCHHHHHHHHHHHTTSSCEEEEECTTTTCBSSSCCCC
T ss_pred CEEEEeccCcccCcCCHHHHHHhhccCceEEEEcCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEEccchhcccCCCCCC
Confidence 888888753 678888888778999999999999999985 788999999999999999999754321 1
Q ss_pred CCCC----CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHHH
Q 016612 186 PLEL----GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQ 257 (386)
Q Consensus 186 ~~~~----~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~ 257 (386)
.... +.++++.|+||++ |.+|+|+|+++++ +++.+.+...........+...++++...++. +....+.+
T Consensus 235 ~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~ 312 (404)
T 2o1b_A 235 ILASENGKDVAIEIYSLSKGY-NMSGFRVGFAVGN-KDMIQALKKYQTHTNAGMFGALQDAAIYALNHYDDFLEEQSNVF 312 (404)
T ss_dssp GGGSTTHHHHEEEEEESTTTT-TCGGGCCEEEEEC-HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHH
T ss_pred hhhcCCCCCCEEEEEecchhc-cCchhheEeEecC-HHHHHHHHHHHhhccCCCCHHHHHHHHHHHhcCHHHHHHHHHHH
Confidence 1222 4579999999999 4457899999986 55666665555444445566656555444332 22333344
Q ss_pred HHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC-CceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccccc
Q 016612 258 QDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA-GSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLI 335 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~ 335 (386)
.++.+.+.+.+++.. +. +. ... +.++++.++......++.+.+. ..|+.+.+|..+..
T Consensus 313 ~~~~~~l~~~L~~~g---------~~------~~----~~~~g~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~~- 372 (404)
T 2o1b_A 313 KTRRDRFEAMLAKAD---------LP------FV----HAKGGIYVWLETPPGYDSEQFEQFLVQEKSILVAPGKPFGE- 372 (404)
T ss_dssp HHHHHHHHHHHHHTT---------CC------EE----CCCBSSEEEEECCTTCCHHHHHHHHHHHHCEECEESGGGCG-
T ss_pred HHHHHHHHHHHHhcC---------Ce------ec----CCCcceEEEEeCCCCCCHHHHHHHHHHHCCEEEeCchhhCc-
Confidence 555556666665431 11 11 112 3457777754323456666654 46888777654210
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhcC
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRTG 384 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~~ 384 (386)
..++++|||++. +++++.++.|.+++++.
T Consensus 373 --------------------~~~~~iRis~~~~~e~l~~~l~~l~~~l~~~ 403 (404)
T 2o1b_A 373 --------------------NGNRYVRISLALDDQKLDEAAIRLTELAYLY 403 (404)
T ss_dssp --------------------GGTTEEEEECCSCTTHHHHHHHHHHGGGGGG
T ss_pred --------------------CCCCeEEEEEcCCHHHHHHHHHHHHHHHHhh
Confidence 025679999974 67778888888877653
No 58
>3zrp_A Serine-pyruvate aminotransferase (AGXT); HET: PLP; 1.75A {Sulfolobus solfataricus} PDB: 3zrq_A* 3zrr_A*
Probab=99.96 E-value=6.8e-28 Score=225.21 Aligned_cols=285 Identities=15% Similarity=0.095 Sum_probs=199.5
Q ss_pred chHHHHHHHHHhhcCCCc----eEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKADR----ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~----~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+..+++++++++++|.+. .+++++|++++.++.+++++||+|+++++.|++. .+..+++..|.+++.++.+
T Consensus 35 ~~~~~~~~~la~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~gd~vi~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~ 112 (384)
T 3zrp_A 35 EALAYSLKGLRYVMGASKNYQPLIIPGGGTSAMESVTSLLKPNDKILVVSNGVFGD--RWEQIFKRYPVNVKVLRPSPGD 112 (384)
T ss_dssp HHHHHHHHHHHHHHTCCTTSEEEEEESCHHHHHHHGGGGCCTTCEEEEECSSHHHH--HHHHHHTTSSCEEEEECCSTTC
T ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEcCCcHHHHHHHHhhcCCCCEEEEecCCcchH--HHHHHHHHcCCcEEEecCCCCC
Confidence 468889999999998763 6667777899885455789999999999998663 2346667889999999875
Q ss_pred --CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 --d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|++++++.+++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+... +....+.|++++|+||+++
T Consensus 113 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~ 192 (384)
T 3zrp_A 113 YVKPGEVEEEVRKSEYKLVALTHVETSTGVREPVKDVINKIRKYVELIVVDGVSSVGAEEVKAEEWNVDVYLTASQKALG 192 (384)
T ss_dssp CCCHHHHHHHHHHSCEEEEEEESEETTTTEECCHHHHHHHHGGGEEEEEEECTTTTTTSCCCTTTTTCSEEEEETTSTTC
T ss_pred CCCHHHHHHHHHhCCCcEEEEeCCCCCCceECcHHHHHHHHHhcCCEEEEECcccccCccccccccCCCEEEecCccccc
Confidence 89999999986 8999999999999999999999999999999999999999877653 2334578999999999997
Q ss_pred cCCCceEEEEEEcChhHHHHH-------------HHhhh---h----cC---CCCChhhHHHHHhcCCc-----HHHHHH
Q 016612 204 GHSDVMAGVLAVKGERLAKEL-------------YFLQN---A----EG---SGLAPFDCWICLRGVKT-----MALRVE 255 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~-------------~~~~~---~----~~---~~~~~~~~~~~~~~~~~-----~~~~~~ 255 (386)
|+.| +|+++++++ +.+.+ ..... . .. ...+......+..+++. +....+
T Consensus 193 ~~~g--~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~ 269 (384)
T 3zrp_A 193 SAAG--LGLLLLSPK-ALSILDSQNSIAGYYLDLRNWLPVMRGAEEGKAAYFATPPVHVILQLAEAFRLIEKEGIENRIK 269 (384)
T ss_dssp CCSS--EEEEEECHH-HHHHHHHCCCSCCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCc--eEEEEECHH-HHHHhcCCCCCCcccccHHHHHHHHHhhcccCCCcCCCCCHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 7776 799998754 43333 11111 1 00 12233333322222221 234444
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhc-cCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ-AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSL 334 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~ 334 (386)
+..++.+.+.+.+++. . +. ++... ....+.++++.+++ .....+.+.+...|+.+++|....
T Consensus 270 ~~~~~~~~l~~~L~~~-g--------~~------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~g~~~~- 332 (384)
T 3zrp_A 270 RHTMVASAIRAGLEAL-G--------LE------IVARRPESYSNTVTGVILKV-ADPQKVLAGTVNEGVEFAPGVHPA- 332 (384)
T ss_dssp HHHHHHHHHHHHHHHT-T--------CC------BSCSSGGGBCSSEEEEECSS-SCHHHHHHHHHTTTCCCEECCCTT-
T ss_pred HHHHHHHHHHHHHHHC-C--------Ce------EccCcccccCccEEEEECCC-CCHHHHHHHHHHCCEEEecCCCCC-
Confidence 5555666666666654 1 11 11000 11235677888865 346677777777788777665210
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 335 ISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 335 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+++|++++ .++++++++.|++++++.
T Consensus 333 -----------------------~~~iRi~~~~~~~~e~i~~~~~~l~~~l~~~ 363 (384)
T 3zrp_A 333 -----------------------FKYFRIGHMGWVTPNDAIIAISVIERTLRKL 363 (384)
T ss_dssp -----------------------CCEEEEECCSSCCHHHHHHHHHHHHHHHHHH
T ss_pred -----------------------cCEEEEeccccCCHHHHHHHHHHHHHHHHHc
Confidence 156999986 477888888888887653
No 59
>1yiz_A Kynurenine aminotransferase; glutamine transaminase; kynurenic acid, mosquito, PLP-enzyme, pyridoxal phosphate, PLP; HET: LLP; 1.55A {Aedes aegypti} SCOP: c.67.1.1 PDB: 1yiy_A* 2r5c_A* 2r5e_A*
Probab=99.96 E-value=3.2e-27 Score=224.20 Aligned_cols=298 Identities=19% Similarity=0.173 Sum_probs=198.8
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|... |.+ +++++.+++.+.+|. + +.+++++|++++.+ +..++++||+|++++|.|+++.. .++..
T Consensus 70 ~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~ 145 (429)
T 1yiz_A 70 ANQYTRGFGHPRLVQALSKLYSQLVDRTINPMTEVLVTVGAYEALYATIQGHVDEGDEVIIIEPFFDCYEP----MVKAA 145 (429)
T ss_dssp GGSCCCSSCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHHH----HHHHT
T ss_pred ccCCCCCCCcHHHHHHHHHHHHHHhCCCCCCcCCEEEecChHHHHHHHHHHhcCCCCEEEEcCCCchhHHH----HHHHc
Confidence 3467665 554 788888888776663 3 45555555799874 55578899999999999999864 34567
Q ss_pred CcEEEEeCC---------------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCC
Q 016612 118 GVVVKRVNT---------------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 118 g~~~~~v~~---------------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~ 179 (386)
|.+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+
T Consensus 146 g~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~ 225 (429)
T 1yiz_A 146 GGIPRFIPLKPNKTGGTISSADWVLDNNELEALFNEKTKMIIINTPHNPLGKVMDRAELEVVANLCKKWNVLCVSDEVYE 225 (429)
T ss_dssp TCEEEEEECBCCCSSSSEEGGGCBCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTT
T ss_pred CCEEEEEeCCcccccccccccCcccCHHHHHHHhccCceEEEECCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEecccc
Confidence 888877764 3789999999889999999999999999985 8999999999999999999987
Q ss_pred CCCc-----cCC--C--CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC--
Q 016612 180 SPVL-----SRP--L--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK-- 248 (386)
Q Consensus 180 ~~~~-----~~~--~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 248 (386)
...+ ... . ..+.|+++.|+||++ +++|+|+|+++++ +++.+.+...........+...+.++...++
T Consensus 226 ~~~~~g~~~~~~~~~~~~~~~~~~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~ 303 (429)
T 1yiz_A 226 HMVFEPFEHIRICTLPGMWERTITIGSAGKTF-SLTGWKIGWAYGP-EALLKNLQMVHQNCVYTCATPIQEAIAVGFETE 303 (429)
T ss_dssp TCBCTTSCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEESC-HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHH
T ss_pred ccccCCCCCcChhhccCCcCceEEEecchhcc-CCCCcceEEEEeC-HHHHHHHHHHHhhcccCCChHHHHHHHHHHhcc
Confidence 4321 111 1 246799999999998 4567999999987 5566656554443333444544443333222
Q ss_pred ---------cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH----------
Q 016612 249 ---------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---------- 309 (386)
Q Consensus 249 ---------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---------- 309 (386)
.+....+...++.+.+.+.+++.. + .+. . ...+.++++.++..
T Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~--------------~~~--~-~~~g~~~~~~~~~~~~~~~~~~~~ 365 (429)
T 1yiz_A 304 LKRLKSPECYFNSISGELMAKRDYMASFLAEVG-M--------------NPT--V-PQGGYFMVADWSSLDSKVDLTQET 365 (429)
T ss_dssp HTTTTSTTSHHHHHHHHHHHHHHHHHHHHHHHT-C--------------EEE--E-CSBSSEEEEECCSSCTTTTCCSSS
T ss_pred cccccchHHHHHHHHHHHHHHHHHHHHHHHhCC-C--------------ccc--C-CCcceEEEEEcccccccccccccc
Confidence 233334445555666666665431 1 111 0 11256777777542
Q ss_pred --HhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 310 --ALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 310 --~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
....++.+.+. ..|+.+.+|..+..- + . .+..++++|||++. +++++.++.|++++++
T Consensus 366 ~~~~~~~l~~~l~~~~gv~v~~g~~f~~~--~----~----------~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~~ 428 (429)
T 1yiz_A 366 DARKDYRFTKWMTKSVGLQGIPPSAFYSE--P----N----------KHLGEDFVRYCFFKKDENLQKAAEILRKWKGS 428 (429)
T ss_dssp SSCHHHHHHHHHHHHTSEECBCGGGGSCG--G----G----------GGGTTTEEEEECCSCHHHHHHHHHHHHHHSCC
T ss_pred cCCCHHHHHHHHHHhCCEEEeCchHhCCC--c----c----------cCCCCCeEEEEecCCHHHHHHHHHHHHHhccC
Confidence 23556666654 678887776542100 0 0 00125789999974 6677778888777654
No 60
>4hvk_A Probable cysteine desulfurase 2; transferase and ISCS, transferase; HET: PMP PG4; 1.43A {Archaeoglobus fulgidus} PDB: 4eb7_A* 4eb5_A*
Probab=99.96 E-value=1.9e-28 Score=228.60 Aligned_cols=298 Identities=17% Similarity=0.139 Sum_probs=192.7
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhc----CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~----~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
+..+++++++++++|.+ +.+++++|++++.+ +.+++ ++||+|+++++.|+++...+. .++..|.+++.++.+
T Consensus 43 ~~~~~~~~~la~~~~~~~~~i~~~~g~~~a~~~~~~~~~~~~~~~gd~vi~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~ 121 (382)
T 4hvk_A 43 EAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPVG 121 (382)
T ss_dssp HHHHHHHHHHHHHTTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHHHTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHcCCCcCeEEEECCchHHHHHHHHHhhhhhcCCCCEEEECCCCcHHHHHHHH-HHHhcCCEEEEeccC
Confidence 46889999999999987 35566666789874 45555 899999999999999876653 334678999999865
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC-CCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-~~~~~~di~~~S~sK~ 201 (386)
|++++++++++++++|++++|+||||.+.|+++|.++|+++|+ +|+|++++.+.... ....+.|++++|+||+
T Consensus 122 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~-li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~ 200 (382)
T 4hvk_A 122 KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAA-LHIDATASVGQIEVDVEKIGADMLTISSNDI 200 (382)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHSSSSE-EEEECTTTBTTBCCCHHHHTCSEEEEESGGG
T ss_pred CCCCcCHHHHHHHhccCceEEEEECCCCCceeeCCHHHHHHHHHHcCE-EEEEhHHhcCCCCCCchhcCCCEEEEeHHHh
Confidence 8999999999999999999999999999999999999999999 99999998776532 2234789999999998
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhh-------hcCCCCChhhHHHHHhcCCcH----HHHHHHHHHHHHHHHHHHhh
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQN-------AEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~ 270 (386)
+ |+.| +|+++++++.. +..... ......+......+..++... ....++..++.+.+.+.+++
T Consensus 201 ~-g~~g--~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 274 (382)
T 4hvk_A 201 Y-GPKG--VGALWIRKEAK---LQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLK 274 (382)
T ss_dssp T-SCTT--CEEEEEETTCC---CCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred c-CCCc--eEEEEEcCccC---cCcccccCCCcCccccCCcCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhc
Confidence 6 5666 57777765431 111110 011122333333333332222 22233333444444444443
Q ss_pred CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHH
Q 016612 271 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 350 (386)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~ 350 (386)
.+ +..++........+++++.+++. ....+.+.+..+|+.+++|..+...... +...
T Consensus 275 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~~~~--------~~~~ 331 (382)
T 4hvk_A 275 IE--------------ESYLNGHPEKRLPNNVNVRFSYI-EGESIVLSLDMAGIQASTGSACSSKTLQ--------PSHV 331 (382)
T ss_dssp ST--------------TEEECSCSSSBCTTEEEEEETTC-CHHHHHHHHHHTTCBCBCC--------C--------CCHH
T ss_pred CC--------------CeEEeCCccccCCCEEEEEECCC-CHHHHHHHHHHCCEEEeeCCccCCCCCc--------chHH
Confidence 32 22222111112235778877543 2566777777788988887653211000 0011
Q ss_pred HHhcCCC----CCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 351 RQARGLT----EDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 351 ~~~~~~~----~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
....+.. ++++|++++. ++++++++.|++++++
T Consensus 332 ~~~~g~~~~~~~~~iRl~~~~~~t~e~i~~~~~~l~~~~~~ 372 (382)
T 4hvk_A 332 LMACGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp HHHTTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCChhhcCCeEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 1222332 5789999983 6677778877777654
No 61
>3p1t_A Putative histidinol-phosphate aminotransferase; PLP-dependent transferase-like, structural genomics, joint C structural genomics, JCSG; HET: TLA; 2.60A {Burkholderia pseudomallei}
Probab=99.96 E-value=2.8e-27 Score=217.31 Aligned_cols=308 Identities=14% Similarity=0.127 Sum_probs=205.0
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC-ceEEeCcH-HHHHHHHH
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD-RALCFTSG-MAALAAVT 87 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~-~~i~~~~g-t~al~~~~ 87 (386)
...+++++.+.+++|. +|.+.++..... .....| +.+...++++.+++++|.+ +.+++++| ++++.++.
T Consensus 15 ~~~~i~l~~n~~~~~~-~~~v~~a~~~~~-----~~~~~y---~~~~~~~lr~~la~~~~~~~~~i~~t~G~~~~l~~~~ 85 (337)
T 3p1t_A 15 AAQAVCLAFNENPEAV-EPRVQAAIAAAA-----ARINRY---PFDAEPRVMRKLAEHFSCPEDNLMLVRGIDECFDRIS 85 (337)
T ss_dssp CCCCEECSSCCCCSCC-CHHHHHHHHHHG-----GGTTSC---CTTHHHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHH
T ss_pred CCCceEeeCCCCCCCC-CHHHHHHHHHhh-----hhhccC---CCCchHHHHHHHHHHhCcCHHHEEEeCCHHHHHHHHH
Confidence 3467888855456662 233333211111 112334 2356788999999999886 45555555 58888776
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
..+ +||+|++++|+|+++. ..++..|.+++.++.+ |++++++. .+++++++++|+||||.+.|++++.
T Consensus 86 ~~~-~gd~vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~d~~~l~~~--~~~~~v~i~~p~nptG~~~~~~~l~ 158 (337)
T 3p1t_A 86 AEF-SSMRFVTAWPGFDGYR----ARIAVSGLRHFEIGLTDDLLLDPNDLAQV--SRDDCVVLANPSNPTGQALSAGELD 158 (337)
T ss_dssp HHS-TTSEEEEESSSCSHHH----HHHTTSCCEEEEECBCTTSSBCHHHHTTC--CTTEEEEEESSCTTTCCCCCHHHHH
T ss_pred Hhc-CCCeEEEeCCCcHHHH----HHHHHcCCEEEEecCCCCCCCCHHHHHhh--cCCCEEEEeCCCCCCCCCCCHHHHH
Confidence 666 9999999999999885 5566789999998854 78888876 4789999999999999999999999
Q ss_pred HHHHHcCCEEEEeCCCCCCCc--c-CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhh
Q 016612 163 EMAHAHGALLLVDNSIMSPVL--S-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFD 239 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~~~~~--~-~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (386)
++|+++++ +|+|++|+.... . .....+.+++++|+||++ |++|+|+||++++ +.+.+.+..... ....+...
T Consensus 159 ~l~~~~~~-~ivDea~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~-~~~~~~l~~~~~--~~~~~~~~ 233 (337)
T 3p1t_A 159 QLRQRAGK-LLIDETYVDYSSFRARGLAYGENELVFRSFSKSY-GLAGLRLGALFGP-SELIAAMKRKQW--FCNVGTLD 233 (337)
T ss_dssp HHHHHCSE-EEEECTTGGGSSCSSSCCCCBTTEEEEEESSSTT-CCTTTCCEEEECC-HHHHHHHHTTSC--TTCSCHHH
T ss_pred HHHHhCCc-EEEECCChhhccccccccccCCCEEEEeeCchhc-cCcchheEEEEeC-HHHHHHHHhhcC--CCCCCHHH
Confidence 99999997 566999873211 1 122236789999999999 6668899999986 445554544322 23445555
Q ss_pred HHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHH
Q 016612 240 CWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 316 (386)
Q Consensus 240 ~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 316 (386)
+.++...++. +..+.++..++.+.+.+.+++.. +... ...++++++...+.. .+.
T Consensus 234 ~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~----------~~~~~~~~~~~~~~~---~~~ 291 (337)
T 3p1t_A 234 LHALEAALDNDRAREAHIAKTLAQRRRVADALRGLG---------YRVA----------SSEANFVLVENAAGE---RTL 291 (337)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHTT---------CCBC----------CCSSSEEEEECTTTH---HHH
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCc---------CEEC----------CCCCeEEEEEcCCHH---HHH
Confidence 5555444443 23344445555566666665531 1111 234678888775433 344
Q ss_pred hhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 016612 317 ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 383 (386)
Q Consensus 317 ~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 383 (386)
+.+...|+.+++|..+. .++++|||++. ++++++++.|++.+++
T Consensus 292 ~~l~~~gi~v~~g~~~~-----------------------~~~~iRis~~~~~~~~~l~~al~~~~~~ 336 (337)
T 3p1t_A 292 RFLRERGIQVKDAGQFG-----------------------LHHHIRISIGREEDNDRLLAALAEYSDH 336 (337)
T ss_dssp HHHHHTTEECEEGGGGT-----------------------CCSEEEEECCCHHHHHHHHHHHHHHTC-
T ss_pred HHHHHCCeEEEECccCC-----------------------CCCeEEEecCCHHHHHHHHHHHHHHhhc
Confidence 55556688877766421 14679999985 6778888888776543
No 62
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=99.96 E-value=2.3e-26 Score=213.15 Aligned_cols=278 Identities=13% Similarity=0.140 Sum_probs=198.2
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----C
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----D 128 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d 128 (386)
...++++.++++++.+ +.++++||++++.+++..+ |+|+++.|+|+++. ..++..|.+++.++.+ +
T Consensus 62 ~~~~l~~~la~~~~~~~~~i~~~~g~t~al~~~~~~~---d~vi~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~~~ 134 (361)
T 3ftb_A 62 NYRRLNKSIENYLKLKDIGIVLGNGASEIIELSISLF---EKILIIVPSYAEYE----INAKKHGVSVVFSYLDENMCID 134 (361)
T ss_dssp TCHHHHHHHHHHHTCCSCEEEEESSHHHHHHHHHTTC---SEEEEEESCCTHHH----HHHHHTTCEEEEEECCTTSCCC
T ss_pred cHHHHHHHHHHHhCCCcceEEEcCCHHHHHHHHHHHc---CcEEEecCChHHHH----HHHHHcCCeEEEeecCcccCCC
Confidence 4568888888888864 5566677779998776666 89999999999886 4455678999888854 6
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-------CCCCCCccEEEecc
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-------RPLELGADIVMHSA 198 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-------~~~~~~~di~~~S~ 198 (386)
++++++.+++ ++++++++|+||||.+.+ +++|.++|+++|+++|+|++|+..... .....+.++++.|+
T Consensus 135 ~~~l~~~l~~-~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~i~~~s~ 213 (361)
T 3ftb_A 135 YEDIISKIDD-VDSVIIGNPNNPNGGLINKEKFIHVLKLAEEKKKTIIIDEAFIEFTGDPSSSFVGEIKNYSCLFIIRAM 213 (361)
T ss_dssp HHHHHHHTTT-CSEEEEETTBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECSSGGGTCCTTSSSGGGTTTCSSEEEEEES
T ss_pred HHHHHHhccC-CCEEEEeCCCCCCCCCCCHHHHHHHHHHhhhcCCEEEEECcchhhcCCcccchhHhcccCCCEEEEeeC
Confidence 7899999988 999999999999999986 677888888999999999998743321 11123556889999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH---HHHHHHHHHHHHHHHHHHhhCCCcc
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM---ALRVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
||.+ |.+|+|+|++++.++++.+.+..... ....+...+.++...++.. ..+.+...++.+.+.+.+++.+.+.
T Consensus 214 sK~~-~~~G~r~g~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 290 (361)
T 3ftb_A 214 TKFF-AMPGIRFGYGITNNKEIAAKIKAKQN--PWNINCFAEMAAINCLKDTNYIEESLLWIKKERKRFIEELNKIGFIK 290 (361)
T ss_dssp SSTT-SCGGGCCEEEEESCHHHHHHHHTTSC--TTCSCHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHSSSEE
T ss_pred hhhc-CCCCcceeEEEeCCHHHHHHHHhhCC--CCCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHhCCCCc
Confidence 9999 55678999998556777666654433 2356667777777777642 3334445556666666666543211
Q ss_pred eEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 276 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 276 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
. +. ...++++++.++. .....+.+.+...|+.+++|..+. +
T Consensus 291 ~-------------~~----~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~v~~g~~~~---------------------~ 331 (361)
T 3ftb_A 291 R-------------VF----SPHANFVLCRLEN-ISGEKLYDSLLKEDIVIRRCCNFI---------------------G 331 (361)
T ss_dssp E-------------EE----CCSSSEEEEEESS-SCHHHHHHHHHTTTEECEECTTST---------------------T
T ss_pred e-------------ec----CCCCeEEEEEcCC-CCHHHHHHHHHHCCeEEeeCccCC---------------------C
Confidence 0 11 2346778888865 235677777777788887776421 1
Q ss_pred CCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 016612 356 LTEDLVRISVGI-EDVNDLISDLDKALRT 383 (386)
Q Consensus 356 ~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 383 (386)
..++++|+|++. ++++++++.+++..+.
T Consensus 332 ~~~~~iRis~~~~~~~~~l~~~l~~~~~~ 360 (361)
T 3ftb_A 332 LDDSFVRFAIKDEKKNTKFLRALKGVENN 360 (361)
T ss_dssp CCTTEEEEECCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEcCCHHHHHHHHHHHHHHHhc
Confidence 246789999985 5567888888777654
No 63
>3l8a_A METC, putative aminotransferase, probable beta-cystathi; beta-cystathionase, lyase; HET: PLP; 1.54A {Streptococcus mutans}
Probab=99.96 E-value=1.4e-28 Score=233.05 Aligned_cols=294 Identities=15% Similarity=0.174 Sum_probs=198.8
Q ss_pred CCccccCCCCchHHHHHHHHHhhcC--CC--ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 45 GPYDYTRSGNPTRDALESLLAKLDK--AD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 45 ~~~~y~~~g~~~~~~l~~~l~~~~g--~~--~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
..+.|+....++++++++++++.+| .+ ..+++++|++|+. ++..++++||+|+++.|.|+++. ..++..|.
T Consensus 90 ~~~~y~~~~~~l~~~l~~~l~~~~g~~~~~~~v~~~~g~~ea~~~a~~~~~~~gd~Vi~~~~~y~~~~----~~~~~~g~ 165 (421)
T 3l8a_A 90 HIFGYNYFNDDLYQAVIDWERKEHDYAVVKEDILFIDGVVPAISIALQAFSEKGDAVLINSPVYYPFA----RTIRLNDH 165 (421)
T ss_dssp CCSSCBCCCHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSCTEEEEEEEESCCHHHH----HHHHHTTE
T ss_pred CCcCCCCCCHHHHHHHHHHHHHHhCCCCCHHHEEEcCCHHHHHHHHHHHhcCCCCEEEECCCCcHHHH----HHHHHCCC
Confidence 3455665444588999999999887 32 4666666678987 45567899999999999999876 44456788
Q ss_pred EEEEeCCC--------CHHHHHhhhC-CCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 120 VVKRVNTC--------DLDEVASAIG-PWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 120 ~~~~v~~~--------d~~~l~~~~~-~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
+++.++.. |+++++++++ +++++|++++|+||+|.+. ++++|.++|+++|+++|+||+|+.....
T Consensus 166 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~vil~~p~nptG~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~ 245 (421)
T 3l8a_A 166 RLVENSLQIINGRFEIDFEQLEKDIIDNNVKIYLLCSPHNPGGRVWDNDDLIKIAELCKKHGVILVSDEIHQDLALFGNT 245 (421)
T ss_dssp EEEEEECEEETTEEECCHHHHHHHHHHTTEEEEEEESSBTTTTBCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCC
T ss_pred EEEeccccccCCCeeeCHHHHHHHhhccCCeEEEECCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEccccccccCCCC
Confidence 88888753 8999999998 7999999999999999884 5899999999999999999998742211
Q ss_pred --CCCC-----CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC-CCChhhHHHHHhcCCc----HHH
Q 016612 185 --RPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVKT----MAL 252 (386)
Q Consensus 185 --~~~~-----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~----~~~ 252 (386)
.... .+.++++.|+||++ +.+|+++|+++++++++.+.+.......+. +.++..+.++...++. +..
T Consensus 246 ~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~~~G~~~~~~~~l~~~~~~~~~~~~~~~~n~~~~~a~~aal~~~~~~~~~ 324 (421)
T 3l8a_A 246 HHSLNTLDASYKDFTIILSSATKTF-NIAGTKNSFAIIQNESLRRKFQYRQLANNQHEVPTVGMIATQAAFQYGKPWLEE 324 (421)
T ss_dssp CCCGGGSCTTGGGTEEEEECSHHHH-TCGGGCCEEEECCSHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHCHHHHHH
T ss_pred CccHHHcCchhcCcEEEEEeChhhc-cCchhheEeEEcCCHHHHHHHHHHHHhcccCCCCHHHHHHHHHHHhccHHHHHH
Confidence 1111 25569999999999 445789999999867777766555433322 4555555444433321 233
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceE-EEEeCCH-HhHHHHHhhcC-cceeccCCC
Q 016612 253 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVL-SFLTGSL-ALSKHVVETTK-YFSITVSFG 329 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~l~~~l~-~~gi~~~~G 329 (386)
..+...++.+.+.+.+++.+.+ . +. .+.++++ ++.++.. .....+.+.+. ..|+.+.+|
T Consensus 325 ~~~~~~~~~~~l~~~L~~~~~i--------~------~~----~~~~~~~~~v~~~~~~~~~~~l~~~l~~~~gi~v~~g 386 (421)
T 3l8a_A 325 LKTVIEGNIKLVIKELEAKTKI--------K------VM----EPEGTYLVWLDFSAYAIAQPQLSEKLQNEAKVVLNDG 386 (421)
T ss_dssp HHHHHHHHHHHHHHHHHHHCSC--------E------EE----CCSBSSEEEEECGGGTCCTTHHHHHHHHTTCEECEEG
T ss_pred HHHHHHHHHHHHHHHHHhCCCc--------e------Ee----CCCeeEEEEEeccccCCCHHHHHHHHHHhCCEEEECc
Confidence 4445555666666666653211 1 11 1223344 4666431 12445556553 458877776
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
..+.. ..++++||+++. +++++.++.|+++++
T Consensus 387 ~~f~~---------------------~~~~~iRi~~~~~~~~i~~~l~~l~~~l~ 420 (421)
T 3l8a_A 387 AHFGK---------------------EGKYFARLNVATPKNTVQEALSRIISVFG 420 (421)
T ss_dssp GGGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHHHHC-
T ss_pred hhhCC---------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHh
Confidence 54210 136789999973 667777888877765
No 64
>3b46_A Aminotransferase BNA3; kynurenine aminotransferase, LLP, PLP, cytoplasm, mitochondrion, pyridoxal phosphate; HET: LLP; 2.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.2e-27 Score=223.37 Aligned_cols=294 Identities=13% Similarity=0.113 Sum_probs=190.9
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCCC----ceEEeCcHHHHHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKAD----RALCFTSGMAALA 84 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~~i~~~~gt~al~ 84 (386)
...++++.+...++ .++.+.++... .+.......|++. |.+ +++++.+++.+.+|.+ +.+++++|++++.
T Consensus 57 ~~~i~l~~g~~~~~-~~~~v~~a~~~---~~~~~~~~~Y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~v~~t~G~~~al~ 132 (447)
T 3b46_A 57 RELINLGQGFFSYS-PPQFAIKEAQK---ALDIPMVNQYSPTRGRPSLINSLIKLYSPIYNTELKAENVTVTTGANEGIL 132 (447)
T ss_dssp SCCEECCCCSCSSC-CCHHHHHHHHH---HTTSGGGGSCCCTTCCHHHHHHHHHHHTTTTTSCCCGGGEEEESHHHHHHH
T ss_pred CCeEEccCCCCCCC-CCHHHHHHHHH---HHhCcCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCChhhEEEeCCHHHHHH
Confidence 46788885544444 22222222111 1111134567776 765 7888888888877652 4555566679987
Q ss_pred -HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-----------------CCHHHHHhhhCCCceEEEEe
Q 016612 85 -AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-----------------CDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 85 -~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-----------------~d~~~l~~~~~~~~~~v~~~ 146 (386)
++..++++||+|++++|.|+++. ..++..|.+++.++. .|+++|++.+++++++|+++
T Consensus 133 ~~~~~l~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~ 208 (447)
T 3b46_A 133 SCLMGLLNAGDEVIVFEPFFDQYI----PNIELCGGKVVYVPINPPKELDQRNTRGEEWTIDFEQFEKAITSKTKAVIIN 208 (447)
T ss_dssp HHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEEEECCGGGGTSCBCSTTSEECHHHHHTTCCTTEEEEEEE
T ss_pred HHHHHHcCCCCEEEEeCCCchhHH----HHHHHcCCEEEEEeCCCccccccccccccCcccCHHHHHHhhccCCeEEEEe
Confidence 55667899999999999999986 344567888777653 27899999998899999999
Q ss_pred CCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCcc----CCC-----CCCccEEEeccccccccCCCceEEEEE
Q 016612 147 SPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS----RPL-----ELGADIVMHSATKFIAGHSDVMAGVLA 214 (386)
Q Consensus 147 ~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~----~~~-----~~~~di~~~S~sK~~~g~~g~~~G~i~ 214 (386)
+|+||||.++ ++++|.++|++||+++|+||+|+...+. ... ..+.++++.|+||++ +.+|+|+||++
T Consensus 209 ~p~nptG~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~i~i~S~sK~~-~~~G~riG~~~ 287 (447)
T 3b46_A 209 TPHNPIGKVFTREELTTLGNICVKHNVVIISDEVYEHLYFTDSFTRIATLSPEIGQLTLTVGSAGKSF-AATGWRIGWVL 287 (447)
T ss_dssp SSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCCGGGSCHHHHTTEEEEEEHHHHT-TCTTSCCEEEE
T ss_pred CCCCCCCcccCHHHHHHHHHHHHHcCcEEEEeccchhcccCCCCcCHHHcCCCCCCcEEEEecCchhc-CCcchhhEEEE
Confidence 9999999997 4899999999999999999999753321 111 236799999999999 55678999999
Q ss_pred EcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc------HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCch
Q 016612 215 VKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGH 288 (386)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~ 288 (386)
++++++.+.+...........+...+.++...++. +....+.+.++.+.+.+.|++.. +.
T Consensus 288 ~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~aL~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~----- 353 (447)
T 3b46_A 288 SLNAELLSYAAKAHTRICFASPSPLQEACANSINDALKIGYFEKMRQEYINKFKIFTSIFDELG---------LP----- 353 (447)
T ss_dssp CSCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHT---------CC-----
T ss_pred eCCHHHHHHHHHHHhhccCCCChHHHHHHHHHHhCCcchHHHHHHHHHHHHHHHHHHHHHHHCC---------Ce-----
Confidence 93456666565544333334455555444444332 22233444455555555555431 11
Q ss_pred hhhhhccCCCCceEEEEeCCH---------------HhHHHHHhhcC-cceeccCCCCc
Q 016612 289 ELHYSQAKGAGSVLSFLTGSL---------------ALSKHVVETTK-YFSITVSFGSV 331 (386)
Q Consensus 289 ~i~~~~~~~~~~~~~~~~~~~---------------~~~~~l~~~l~-~~gi~~~~G~~ 331 (386)
+. . +..+.++++.++.. ....++.+.+. ..|+.+.+|..
T Consensus 354 -~~--~-~~~g~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~l~~~~gV~v~pg~~ 408 (447)
T 3b46_A 354 -YT--A-PEGTYFVLVDFSKVKIPEDYPYPEEILNKGKDFRISHWLINELGVVAIPPTE 408 (447)
T ss_dssp -EE--C-CSBSSEEEEECTTCCCCTTCCCCGGGSSSCHHHHHHHHHHHHTCEECBCGGG
T ss_pred -ec--C-CCeeEEEEEecccccCccccccccccccCCCHHHHHHHHHHhCCEEEECchH
Confidence 10 0 12255667776431 23456666654 46888777654
No 65
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=99.95 E-value=6e-27 Score=221.83 Aligned_cols=297 Identities=16% Similarity=0.143 Sum_probs=201.8
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCCC-----ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKAD-----RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~~-----~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
..|... |.+ +++++.+++.+.+|.+ +.+++++|++++. ++..++++||+|++++|.|+++. ..++..|
T Consensus 61 ~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g 136 (422)
T 3fvs_A 61 NQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGGYGALFTAFQALVDEGDEVIIIEPFFDCYE----PMTMMAG 136 (422)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTT
T ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECChHHHHHHHHHHHcCCCCEEEEcCCCchhhH----HHHHHcC
Confidence 567766 664 7888888888877753 3555666679987 45557899999999999999986 4455678
Q ss_pred cEEEEeCC-----------------CCHHHHHhhhCCCceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCC
Q 016612 119 VVVKRVNT-----------------CDLDEVASAIGPWTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 119 ~~~~~v~~-----------------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~ 178 (386)
.+++.++. .|++++++++++++++|++++|+||||.+. ++++|.++|+++|+++|+|++|
T Consensus 137 ~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~ 216 (422)
T 3fvs_A 137 GRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKFTSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCITDEVY 216 (422)
T ss_dssp CEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred CEEEEEecccccccccccccccCCCCCHHHHHhhcCCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEEEEccc
Confidence 88877764 278999999999999999999999999998 5999999999999999999999
Q ss_pred CCCCcc-----CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC--
Q 016612 179 MSPVLS-----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-- 247 (386)
Q Consensus 179 ~~~~~~-----~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 247 (386)
+...+. +.. ..+.++++.|+||++ |.+|+|+|++++++ .+.+.+...........+...+.++...+
T Consensus 217 ~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~ 294 (422)
T 3fvs_A 217 QWMVYDGHQHISIASLPGMWERTLTIGSAGKTF-SATGWKVGWVLGPD-HIMKHLRTVHQNSVFHCPTQSQAAVAESFER 294 (422)
T ss_dssp TTCBCTTCCCCCGGGSTTTGGGEEEEEEHHHHH-TCGGGCCEEEECCH-HHHHHHHHHHHTTTCCCCHHHHHHHHHHHHH
T ss_pred hhhccCCCCCCChhhcccccCcEEEEecchhcc-CCccceEEEEEeCH-HHHHHHHHHHhhccCCCCcHHHHHHHHHHhh
Confidence 753221 111 125679999999999 55678999999874 55555555544444455555555544333
Q ss_pred ---------CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHh-------
Q 016612 248 ---------KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLAL------- 311 (386)
Q Consensus 248 ---------~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~------- 311 (386)
..+....+.+.++.+.+.+.+++.. + .... +..+.++++.+.....
T Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~----------------~~~~~~~~~~~~~~~~~~~~~~~ 356 (422)
T 3fvs_A 295 EQLLFRQPSSYFVQFPQAMQRCRDHMIRSLQSVG-L-KPII----------------PQGSYFLITDISDFKRKMPDLPG 356 (422)
T ss_dssp HHHTTTCTTCHHHHHHHHHHHHHHHHHHHHHTTT-C-EEEB----------------CSBSSEEEEECHHHHHHCCCCCC
T ss_pred ccccccchHHHHHHHHHHHHHHHHHHHHHHHHcC-C-eecC----------------CCeeeEEEEechhhccccccccc
Confidence 2234445556666677777776542 1 1111 1235566666532110
Q ss_pred ------HHHHHhh-cCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHh
Q 016612 312 ------SKHVVET-TKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALR 382 (386)
Q Consensus 312 ------~~~l~~~-l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~ 382 (386)
..++.+. +...|+.+.+|..+..- + .....++++|||++. +++++.++.|+++++
T Consensus 357 ~~~~~~~~~~~~~ll~~~gv~v~~g~~f~~~--~--------------~~~~~~~~iRis~~~~~e~i~~~l~~l~~~l~ 420 (422)
T 3fvs_A 357 AVDEPYDRRFVKWMIKNKGLVAIPVSIFYSV--P--------------HQKHFDHYIRFCFVKDEATLQAMDEKLRKWKV 420 (422)
T ss_dssp CTTCCHHHHHHHHHHHHHCEECEEGGGGSCH--H--------------HHTTSCSEEEEECCCCHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHHhcCEEEeCcHHhcCC--c--------------CCCCCCCeEEEEecCCHHHHHHHHHHHHHHHh
Confidence 2344444 34468877777652210 0 001236889999974 777888888888887
Q ss_pred c
Q 016612 383 T 383 (386)
Q Consensus 383 ~ 383 (386)
+
T Consensus 421 ~ 421 (422)
T 3fvs_A 421 E 421 (422)
T ss_dssp C
T ss_pred h
Confidence 5
No 66
>1elu_A L-cysteine/L-cystine C-S lyase; FES cluster biosynthesis, pyridoxal 5'-phosphate, thiocystei aminoacrylate, enzyme-product complex; HET: PDA; 1.55A {Synechocystis SP} SCOP: c.67.1.3 PDB: 1elq_A* 1n2t_A* 1n31_A*
Probab=99.95 E-value=3.9e-27 Score=220.63 Aligned_cols=286 Identities=18% Similarity=0.121 Sum_probs=199.7
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAV-THL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+...++++.+++++|.+ +.+++++|++++.++ ..+ +++||+|++++|+|+++...+..+++..|.+++.++.+
T Consensus 59 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~~~~~ 138 (390)
T 1elu_A 59 QLIAQLRQALAETFNVDPNTITITDNVTTGCDIVLWGLDWHQGDEILLTDCEHPGIIAIVQAIAARFGITYRFFPVAATL 138 (390)
T ss_dssp HHHHHHHHHHHHHTTSCGGGEEEESSHHHHHHHHHHHSCCCTTCEEEEETTCCHHHHHHHHHHHHHHCCEEEEECCGGGS
T ss_pred HHHHHHHHHHHHHcCCCHHHEEEeCChHHHHHHHHhCCCCCCCCEEEEecCcccHHHHHHHHHHHHhCcEEEEEcCCCCC
Confidence 45788999999999976 567777888999754 556 68999999999999998765555566778899888862
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHH----HcCCEEEEeCCCCCCCccC-CCCCCccEEEecc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAH----AHGALLLVDNSIMSPVLSR-PLELGADIVMHSA 198 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~----~~~~~li~D~a~~~~~~~~-~~~~~~di~~~S~ 198 (386)
|++++++.+++++++|++++|+||||.+.|+++|.++|+ ++|+++|+|++|+.+.... ....+.|++++|+
T Consensus 139 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~ 218 (390)
T 1elu_A 139 NQGDAAAVLANHLGPKTRLVILSHLLWNTGQVLPLAEIMAVCRRHQGNYPVRVLVDGAQSAGSLPLDFSRLEVDYYAFTG 218 (390)
T ss_dssp SSSCHHHHHHTTCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHCCSSSCCEEEEECTTTBTTBCCCTTTSCCSEEEEES
T ss_pred CccchHHHHHHhcCCCceEEEEeccccCCceecCHHHHHHHHhhhhhhcCcEEEEEcccccCCcCCChhhcCCCEEEccc
Confidence 789999999889999999999999999999999999999 9999999999998765432 2245789999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhh----------------------hhcCCCCChhhHHHHHhcCC------cH
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQ----------------------NAEGSGLAPFDCWICLRGVK------TM 250 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~----------------------~~~~~~~~~~~~~~~~~~~~------~~ 250 (386)
||++.++.| +|+++++++ +.+.+.... .......+.....++..+++ .+
T Consensus 219 ~K~~~~~~g--~G~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~l~~~~~~ 295 (390)
T 1elu_A 219 HKWFAGPAG--VGGLYIHGD-CLGEINPTYVGWRSITYGAKGEPTGWAEGGKRFEVATSAYPQYAGLLAALQLHQRQGTA 295 (390)
T ss_dssp SSTTCCCTT--CEEEEECTT-TGGGCCCCSCCTTTEEECTTSCEEEECSGGGGGCCSCCCHHHHHHHHHHHHHHHHHCCH
T ss_pred cccccCCCc--eEEEEECHH-hHhhcCCccccCCcccccccCcccccccchHhhCCCCCCHHHHHHHHHHHHHHHHcCCH
Confidence 997767665 699998754 433222110 11111223333322222222 13
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCC
Q 016612 251 ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 330 (386)
Q Consensus 251 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~ 330 (386)
....++..++.+.+.+.|++.+.+ .++.+ .++.++++.|.++......++.+.+...|+.+.+|.
T Consensus 296 ~~~~~~~~~~~~~l~~~L~~~~g~--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~ 360 (390)
T 1elu_A 296 EERYQAICQRSEFLWRGLNQLPHV--------------HCLAT-SAPQAGLVSFTVDSPLGHRAIVQKLEEQRIYLRTIA 360 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHSTTE--------------EESCS-SCCSSSEEEEEECSSSCHHHHHHHHHHTTEECEEET
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCc--------------EEecC-ccccccEEEEEcCCCCCHHHHHHHHHHCCEEEEecC
Confidence 445556666777777777664321 11110 023578888888532235567777767788766543
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.++++|||++....++.++.+.++|++.
T Consensus 361 --------------------------~~~~iRis~~~~~~~~~i~~~~~~l~~~ 388 (390)
T 1elu_A 361 --------------------------DPDCIRACCHYITDEEEINHLLARLADF 388 (390)
T ss_dssp --------------------------TTTEEEEECCTTCCHHHHHHHHHHHTTC
T ss_pred --------------------------CCCeEEEecccCCCHHHHHHHHHHHHhh
Confidence 1456999997766667777777777654
No 67
>1xi9_A Putative transaminase; alanine aminotransferase, southeast collaboratory for structural genomics, secsg; HET: PLP; 2.33A {Pyrococcus furiosus} SCOP: c.67.1.1
Probab=99.95 E-value=1e-27 Score=225.97 Aligned_cols=293 Identities=18% Similarity=0.153 Sum_probs=195.4
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
..|... |.+ +++++.+++.+.+|. ++.+++++|++++.+ +..++++||+|++++|+|+++. ..++..|.
T Consensus 72 ~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~v~~t~g~~~al~~~~~~l~~~gd~Vl~~~~~~~~~~----~~~~~~g~ 147 (406)
T 1xi9_A 72 NYYGDSEGLPELRKAIVEREKRKNGVDITPDDVRVTAAVTEALQLIFGALLDPGDEILVPGPSYPPYT----GLVKFYGG 147 (406)
T ss_dssp CSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHHTTC
T ss_pred CCCCCCCCcHHHHHHHHHHHHHhcCCCCCHHHEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCCccHH----HHHHHcCC
Confidence 356665 554 778888888776553 356666666799874 5557899999999999998875 44456788
Q ss_pred EEEEeCCC-------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----C
Q 016612 120 VVKRVNTC-------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (386)
Q Consensus 120 ~~~~v~~~-------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~ 185 (386)
+++.++.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+. .
T Consensus 148 ~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~~~~~ 227 (406)
T 1xi9_A 148 KPVEYRTIEEEDWQPDIDDIRKKITDRTKAIAVINPNNPTGALYDKKTLEEILNIAGEYEIPVISDEIYDLMTYEGEHIS 227 (406)
T ss_dssp EEEEEEEEGGGTSEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBSSSCCCC
T ss_pred EEEEeecCCCcCCcCCHHHHHHhhCcCceEEEEECCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCC
Confidence 88877642 789999999889999999999999999976 999999999999999999999764431 1
Q ss_pred CCC--CCc-cEEEeccccccccCCCceEEEEE--EcCh---hHHHHHHHhhhhcCCCCChhhHHHHHhcCC----cHHHH
Q 016612 186 PLE--LGA-DIVMHSATKFIAGHSDVMAGVLA--VKGE---RLAKELYFLQNAEGSGLAPFDCWICLRGVK----TMALR 253 (386)
Q Consensus 186 ~~~--~~~-di~~~S~sK~~~g~~g~~~G~i~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 253 (386)
... .+. |++++|+||++ +++|+|+|+++ ++++ ++.+.+....... ...+...+.++...++ .+...
T Consensus 228 ~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~~~a~~~~l~~~~~~~~~~ 305 (406)
T 1xi9_A 228 PGSLTKDVPVIVMNGLSKVY-FATGWRLGYMYFVDPENKLSEVREAIDRLARIR-LCPNTPAQFAAIAGLTGPMDYLKEY 305 (406)
T ss_dssp HHHHCSSSCEEEEEESTTTT-CCGGGCCEEEEEECTTCTTHHHHHHHHHHHHHT-CCSCSHHHHHHHHHHHSCCHHHHHH
T ss_pred HHHcCCCceEEEEecccccc-CCCccEEEEEEEecCchhHHHHHHHHHHHHHhh-cCCCHHHHHHHHHHHhCCcHHHHHH
Confidence 111 356 89999999999 45678999998 6641 5666565544433 3444444444433331 12333
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCce-EEEEeCC--HHhHHHHHhhcC-cceeccCCC
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSV-LSFLTGS--LALSKHVVETTK-YFSITVSFG 329 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~-~~~~~~~--~~~~~~l~~~l~-~~gi~~~~G 329 (386)
.+...++.+.+.+.|++.+ ++.+. ...+++ +++.++. .....++.+.+. ..|+.+.+|
T Consensus 306 ~~~~~~~~~~l~~~L~~~~--------------~~~~~----~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g 367 (406)
T 1xi9_A 306 MKKLKERRDYIYKRLNEIP--------------GISTT----KPQGAFYIFPKIEVGPWKNDKEFVLDVLHNAHVLFVHG 367 (406)
T ss_dssp HHHHHHHHHHHHHHHHTST--------------TEECC----CCCBSSEECCEECSCSCSSHHHHHHHHHHHHCEECEEG
T ss_pred HHHHHHHHHHHHHHHHhCC--------------CCeee----cCCeeEEEEEecCccCCCCHHHHHHHHHHhCCEEEeCc
Confidence 3444555555555555432 11111 112233 3345542 123556666664 678877766
Q ss_pred CccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHhcC
Q 016612 330 SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 330 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~~~ 384 (386)
..+.. ..++++|||++ .+++++.++.|++++++.
T Consensus 368 ~~f~~---------------------~~~~~lRis~~~~~~~i~~~~~~l~~~l~~~ 403 (406)
T 1xi9_A 368 SGFGE---------------------YGAGHFRAVFLPPIEILEEAMDRFEKFMKER 403 (406)
T ss_dssp GGGCG---------------------GGTTBEEEECCSCHHHHHHHHHHHHHHHHHC
T ss_pred hhcCC---------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 54210 02567999997 366777888888887653
No 68
>1v2d_A Glutamine aminotransferase; PLP, riken structural genomics/proteomics initi RSGI, structural genomics; HET: PLP; 1.90A {Thermus thermophilus} SCOP: c.67.1.1 PDB: 1v2e_A* 1v2f_A*
Probab=99.95 E-value=7.6e-27 Score=218.16 Aligned_cols=287 Identities=17% Similarity=0.140 Sum_probs=193.4
Q ss_pred cccCCCCchHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 48 DYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 48 ~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
.|... ....++++.++++++.+ +.+++++|++++.+ +..++++||+|++++|+|+++. ..++..|.+++.+
T Consensus 56 ~y~~~--~~~~~l~~~la~~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v 129 (381)
T 1v2d_A 56 QYAPP--AGLPALREALAEEFAVEPESVVVTSGATEALYVLLQSLVGPGDEVVVLEPFFDVYL----PDAFLAGAKARLV 129 (381)
T ss_dssp SCCCT--TCCHHHHHHHHHHHTSCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEE
T ss_pred CCCCC--CCCHHHHHHHHHhcCCChhhEEEcCChHHHHHHHHHHhCCCCCEEEEcCCCchhHH----HHHHHcCCEEEEE
Confidence 45543 13457777888888875 56777777899874 5557899999999999999986 3455678888888
Q ss_pred CCC--------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----CCC--
Q 016612 125 NTC--------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL-- 187 (386)
Q Consensus 125 ~~~--------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~~~-- 187 (386)
+.+ |++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+. +..
T Consensus 130 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~g~~~~~~~~~ 209 (381)
T 1v2d_A 130 RLDLTPEGFRLDLSALEKALTPRTRALLLNTPMNPTGLVFGERELEAIARLARAHDLFLISDEVYDELYYGERPRRLREF 209 (381)
T ss_dssp ECEEETTEEECCHHHHHTTCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBSSSCCCCHHHH
T ss_pred eCCCCCccCCcCHHHHHHhcCcCCEEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEEcCccccccCCCCCCHHHh
Confidence 753 799999999889999999999999999986 899999999999999999999754321 111
Q ss_pred CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC------cHHHHHHHHHHHH
Q 016612 188 ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK------TMALRVEKQQDNA 261 (386)
Q Consensus 188 ~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 261 (386)
..+.|+++.|+||++ +++|+|+|++++++ ++.+.+...........+...+.++...++ .+....+...++.
T Consensus 210 ~~~~~~~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~ 287 (381)
T 1v2d_A 210 APERTFTVGSAGKRL-EATGYRVGWIVGPK-EFMPRLAGMRQWTSFSAPTPLQAGVAEALKLARREGFYEALREGYRRRR 287 (381)
T ss_dssp CTTTEEEEEEHHHHT-TCGGGCCEEEECCT-TTHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHH
T ss_pred cCCCEEEEeechhhc-CCcccceEEEEeCH-HHHHHHHHHHhhcccCCCcHHHHHHHHHHhCcccHHHHHHHHHHHHHHH
Confidence 347899999999999 55578999999874 455555444433333444544444433332 2333444555666
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
+.+.+.+++.. + .++ . ...+.++++.+++.+ +.+.+...|+.+.+|..+.. +
T Consensus 288 ~~l~~~L~~~g---------~------~~~--~-~~~~~~~~~~~~~~~----~~~~l~~~gi~v~~g~~~~~---~--- 339 (381)
T 1v2d_A 288 DLLAGGLRAMG---------L------RVY--V-PEGTYFLMAELPGWD----AFRLVEEARVALIPASAFYL---E--- 339 (381)
T ss_dssp HHHHHHHHHTT---------C------CEE--C-CSBSSEEEEECTTCC----HHHHHHHTCEECEEGGGGCS---S---
T ss_pred HHHHHHHHHCC---------C------Eec--C-CCcceEEEEecChHh----HHHHHHhCCEEEecchHhCC---C---
Confidence 66666666521 1 111 0 112456777775432 44445556777766654210 0
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 342 SHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
+..++++|||++. ++++++++.|.+++++
T Consensus 340 -------------~~~~~~iRi~~~~~~~~i~~~~~~l~~~l~~ 370 (381)
T 1v2d_A 340 -------------DPPKDLFRFAFCKTEEELHLALERLGRVVNS 370 (381)
T ss_dssp -------------SCCTTEEEEECCSCHHHHHHHHHHHHHHC--
T ss_pred -------------CCCCCEEEEEeCCCHHHHHHHHHHHHHHHhh
Confidence 0135789999975 5667777777777654
No 69
>3nnk_A Ureidoglycine-glyoxylate aminotransferase; PLP-dependent; HET: LLP; 2.58A {Klebsiella pneumoniae}
Probab=99.95 E-value=1.2e-27 Score=225.65 Aligned_cols=287 Identities=12% Similarity=0.096 Sum_probs=197.1
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+..+++++++++++|.+ + .+++++|++++. ++..++++||+|++++++|++.. +...++..|.+++.++.+
T Consensus 46 ~~~~~~~~~la~~~~~~~~~~v~~~~sgt~al~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 123 (411)
T 3nnk_A 46 HYMNEVMALYRGVFRTENRWTMLVDGTSRAGIEAILVSAIRPGDKVLVPVFGRFGHL--LCEIARRCRAEVHTIEVPWGE 123 (411)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHHHhcCCCCEEEEecCCchHHH--HHHHHHHcCCeEEEEecCCCC
Confidence 46788999999999886 2 345567789987 55667899999999999997631 135566789999988875
Q ss_pred --CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 --d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|++++++++++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... +....+.|++++|+||++.
T Consensus 124 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~d~~~~s~~K~l~ 203 (411)
T 3nnk_A 124 VFTPDQVEDAVKRIRPRLLLTVQGDTSTTMLQPLAELGEICRRYDALFYTDATASLGGNPLETDVWGLDAVSAGMQKCLG 203 (411)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTBTTBCCCTTTTTCSEEECCSTTTTC
T ss_pred CCCHHHHHHHHhhCCCeEEEEeCCCCCcceeccHHHHHHHHHHcCCEEEEECCcccCCcccchhccCCcEEEecCccccC
Confidence 89999999985 8999999999999999999999999999999999999999876543 3345578999999999977
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhh-----------------------------------hh-cCCCCChhhHHHHHhcC
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQ-----------------------------------NA-EGSGLAPFDCWICLRGV 247 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~-----------------------------------~~-~~~~~~~~~~~~~~~~~ 247 (386)
++.| +|++++++ ++.+.+.... .. .....+......+..++
T Consensus 204 ~~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~g~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al 280 (411)
T 3nnk_A 204 GPSG--TSPITLSA-RMEEAIRRRKCVEEGIRTDAHRDGDEEMIYSNYFDLGMVMDYWGPERLNHHTEATTALFGARECA 280 (411)
T ss_dssp CCSS--EEEEEECH-HHHHHHHTTCCCCGGGCCTTCCCCSSCCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHH
T ss_pred CCCc--eEEEEECH-HHHHHHhhcccccccccccccccccCCCCcccccchHHHHhhhccccCCCCCCCHHHHHHHHHHH
Confidence 7776 79999874 4554444322 00 00112222222222222
Q ss_pred Cc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc
Q 016612 248 KT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF 322 (386)
Q Consensus 248 ~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 322 (386)
+. +....++..++.+.+.+.|++.. +. ++.......+.++++.++......++.+.+...
T Consensus 281 ~~~~~~g~~~~~~~~~~~~~~l~~~L~~~g---------~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 345 (411)
T 3nnk_A 281 RLILQEGLDYGIARHKLHGDALVKGIQAMG---------LE------TFGDLKHKMNNVLGVVIPQGINGDQARKLMLED 345 (411)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHTT---------CC------BCSCGGGBCSSEEEEECCTTCCHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHcC---------CE------eCCCcccccccEEEEECCCCCCHHHHHHHHHHh
Confidence 21 23334445555566666666531 11 111111224577888885433456677766554
Q ss_pred -eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe-c----cCChHHHHHHHHHHHhcC
Q 016612 323 -SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 323 -gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~----~~~~~~~i~~l~~~l~~~ 384 (386)
|+.+++|.. ...++++||++ + .++++++++.|++++++.
T Consensus 346 ~gi~v~~g~~-----------------------~~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 390 (411)
T 3nnk_A 346 FGIEIGTSFG-----------------------PLHGKVWRIGTMGYNARKDCVMTTLSALEAVLNYL 390 (411)
T ss_dssp HSEEEEECCG-----------------------GGTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred cCeEEeCccC-----------------------CCCCCEEEEeCccCcCCHHHHHHHHHHHHHHHHHc
Confidence 787665532 11356899998 5 367888888888888764
No 70
>3lvm_A Cysteine desulfurase; structural genomics, montreal-kingston bacterial structural genomics initiative, BSGI, transferase; HET: PLP; 2.05A {Escherichia coli} PDB: 3lvk_A* 3lvl_B* 3lvj_A* 1p3w_B*
Probab=99.95 E-value=3.1e-27 Score=223.85 Aligned_cols=299 Identities=20% Similarity=0.189 Sum_probs=194.8
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHhc----CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAV-THLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~~----~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
+..+++++++++++|.+ +.+++++|++|+.++ .+++ ++||+|+++++.|+++...+... +..|.+++.++.+
T Consensus 68 ~~~~~l~~~la~~~~~~~~~v~~~~ggt~a~~~a~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~ 146 (423)
T 3lvm_A 68 EAVDIARNQIADLVGADPREIVFTSGATESDNLAIKGAANFYQKKGKHIITSKTEHKAVLDTCRQL-EREGFEVTYLAPQ 146 (423)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHHHHHTTTCCEEEEETTSCHHHHHHHHHH-HHTTCEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEeCChHHHHHHHHHHHHHhhccCCCEEEECCccchHHHHHHHHH-HHcCCEEEEeccC
Confidence 36788999999999987 677778888998744 4454 37999999999999987665333 6679999999875
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++++++++++|++++++||||.+.|+++|.++|+++|++||+|++++.+... +....+.|++++|+||+
T Consensus 147 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK~ 226 (423)
T 3lvm_A 147 RNGIIDLKELEAAMRDDTILVSIMHVNNEIGVVQDIAAIGEMCRARGIIYHVDATQSVGKLPIDLSQLKVDLMSFSGHKI 226 (423)
T ss_dssp TTSCCCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTSCCSEEEEESTTT
T ss_pred CCCccCHHHHHHhcCCCcEEEEEeCCCCCCccccCHHHHHHHHHHcCCEEEEEhhhhcCCCCcChhhcCCCEEEechHHh
Confidence 899999999999999999999999999999999999999999999999999877653 34456789999999997
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhh-------hcCCCCChhhHHHHHhcCCcH----HHHHHHHHHHHHHHHHHHhh
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQN-------AEGSGLAPFDCWICLRGVKTM----ALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~~~l~~ 270 (386)
+ |+.| +|+++++++.... +..... ......+......+..+++.+ ....++..++.+.+.+.+++
T Consensus 227 ~-g~~g--~G~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~ 302 (423)
T 3lvm_A 227 Y-GPKG--IGALYVRRKPRVR-IEAQMHGGGHERGMRSGTLPVHQIVGMGEAYRIAKEEMATEMERLRGLRNRLWNGIKD 302 (423)
T ss_dssp T-SCSS--CEEEEECBTTBCC-CCCSSCSSCTTTTTCCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred c-CCCC--eEEEEEeccccCC-CCccccCCcccccccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 6 5666 6888887543221 211111 111122333333332333222 22233334444444444443
Q ss_pred CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHH
Q 016612 271 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 350 (386)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~ 350 (386)
.+ +..++.......++++.+.+... ....+.+.+.. +.+..|..+..... .+...
T Consensus 303 ~~--------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~--i~v~~g~~~~~~~~--------~~~~~ 357 (423)
T 3lvm_A 303 IE--------------EVYLNGDLEHGAPNILNVSFNYV-EGESLIMALKD--LAVSSGSACTSASL--------EPSYV 357 (423)
T ss_dssp ST--------------TEEEESCSTTBCTTEEEEEETTS-CHHHHHHHTTT--EECBCCCC-----C--------CCCHH
T ss_pred CC--------------CEEEeCCccccCCCeEEEEeCCC-CHHHHHHHHhh--heeccCccccCCCc--------cccHH
Confidence 32 22222111112245777777443 35667777766 66666654221100 00111
Q ss_pred HHhcCCC----CCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 351 RQARGLT----EDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 351 ~~~~~~~----~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
...++.. ++++||+++. ++++++++.|++++++
T Consensus 358 ~~~~g~~~~~~~~~iRi~~~~~~t~e~i~~~~~~l~~~~~~ 398 (423)
T 3lvm_A 358 LRALGLNDELAHSSIRFSLGRFTTEEEIDYTIELVRKSIGR 398 (423)
T ss_dssp HHHHTCCHHHHHTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCccccCceEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1222332 4789999974 6677777777777754
No 71
>2gb3_A Aspartate aminotransferase; TM1698, structural genomics, PSI structure initiative, joint center for structural genomics; HET: LLP; 2.50A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=1.4e-26 Score=218.49 Aligned_cols=296 Identities=19% Similarity=0.207 Sum_probs=198.6
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
...|... |.+ +++++.+++.+.+|. ++.+++++|++++. ++..++++||+|++++|+|+++.. .++..|
T Consensus 72 ~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~----~~~~~g 147 (409)
T 2gb3_A 72 VVYYSHSAGIWELREAFASYYKRRQRVDVKPENVLVTNGGSEAILFSFAVIANPGDEILVLEPFYANYNA----FAKIAG 147 (409)
T ss_dssp SCCCCCTTCCHHHHHHHHHHHHHTSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHHH----HHHHHT
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHhCCCCCHHHEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCchhHHH----HHHHcC
Confidence 3456655 554 677777777766553 35666777789987 455578999999999999998863 445678
Q ss_pred cEEEEeCCCC------HHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----C
Q 016612 119 VVVKRVNTCD------LDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----R 185 (386)
Q Consensus 119 ~~~~~v~~~d------~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~ 185 (386)
.+++.++.++ +++|++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+... .
T Consensus 148 ~~~~~v~~~~~~~~~~~~~l~~~l~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~Dea~~~~~~~~~~~~ 227 (409)
T 2gb3_A 148 VKLIPVTRRMEEGFAIPQNLESFINERTKGIVLSNPCNPTGVVYGKDEMRYLVEIAERHGLFLIVDEVYSEIVFRGEFAS 227 (409)
T ss_dssp CEEEEEECCGGGTSCCCTTGGGGCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCSSCCCC
T ss_pred CEEEEeccCCCCCCccHHHHHHhhCcCCeEEEECCCCCCCCCCcCHHHHHHHHHHHHHcCCEEEEECcccccccCCCCCC
Confidence 8888887652 78888888889999999999999999974 899999999999999999999764331 1
Q ss_pred CC-C-CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHHHHHH
Q 016612 186 PL-E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQD 259 (386)
Q Consensus 186 ~~-~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~ 259 (386)
.. . .+.|++++|+||++ |++|+|+|+++++++++.+.+........ ..+...+.++...++. +....+...+
T Consensus 228 ~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~l~~~l~~~~~~~~-~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~ 305 (409)
T 2gb3_A 228 ALSIESDKVVVIDSVSKKF-SACGARVGCLITRNEELISHAMKLAQGRL-APPLLEQIGSVGLLNLDDSFFDFVRETYRE 305 (409)
T ss_dssp GGGSCCTTEEEEEESTTTT-TCGGGCCEEEECSCHHHHHHHHHHHHHSC-CCCHHHHHHHHHHHTCCHHHHHHHHHHHHH
T ss_pred ccccCCCCEEEEecchhcc-CCccceEEEEEECcHHHHHHHHHHHhccC-CCCHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 11 1 35799999999999 55678999999986466666655544443 5566655555554432 2233344455
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc------eeccCCCCccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF------SITVSFGSVKS 333 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------gi~~~~G~~~~ 333 (386)
+.+.+.+.+++.. +.-. . . +..+.++++.+++ ....++.+.+... |+.+.+|..+.
T Consensus 306 ~~~~l~~~L~~~g---------~~~~-----~--~-~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~~~gi~v~~g~~f~ 367 (409)
T 2gb3_A 306 RVETVLKKLEEHG---------LKRF-----T--K-PSGAFYITAELPV-EDAEEFARWMLTDFNMDGETTMVAPLRGFY 367 (409)
T ss_dssp HHHHHHHHHHHTT---------CCCB-----C--C-CSBSSEEEEECSS-SCHHHHHHHHHHSCCBTTEEEECEEGGGGC
T ss_pred HHHHHHHHHHHcC---------ceee-----e--C-CCeeEEEEEEeCC-CCHHHHHHHHHhccccccCcEEEeCchHhC
Confidence 5555666665431 1110 0 0 1123455556652 2245566666544 88777665321
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHhc
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALRT 383 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~~ 383 (386)
.. + +..++++||+++ .++++++++.|++++++
T Consensus 368 ~~--~----------------~~~~~~iRis~~~~~e~i~~~~~~l~~~l~~ 401 (409)
T 2gb3_A 368 LT--P----------------GLGKKEIRIACVLEKDLLSRAIDVLMEGLKM 401 (409)
T ss_dssp SS--T----------------TTTSSEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred CC--C----------------CCCCCEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 00 0 123678999997 36677888888887754
No 72
>1iay_A ACC synthase 2, 1-aminocyclopropane-1-carboxylate synthase 2; protein-cofactor-inhibitor complex, V6-dependent enzyme, LYA; HET: PLP AVG; 2.70A {Solanum lycopersicum} SCOP: c.67.1.4 PDB: 1iax_A*
Probab=99.95 E-value=6.2e-26 Score=215.32 Aligned_cols=293 Identities=14% Similarity=0.130 Sum_probs=197.6
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcC----C--CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDK----A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g----~--~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
..|... |.+ +++++.+++.+.+| . ++.++++++++++. ++..++++||+|++++|+|+++.. .+....
T Consensus 77 ~~Y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~~i~~~~G~~~ai~~~~~~~~~~gd~Vl~~~p~y~~~~~---~~~~~~ 153 (428)
T 1iay_A 77 ANFQDYHGLPEFRKAIAKFMEKTRGGRVRFDPERVVMAGGATGANETIIFCLADPGDAFLVPSPYYPAFNR---DLRWRT 153 (428)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTCSCCCTTSCEEEEHHHHHHHHHHHHHCCTTCEEEEESSCCTTHHH---HTTTTT
T ss_pred cCCCCCCCcHHHHHHHHHHHHHhcCCCCCCChhhEEEccChHHHHHHHHHHhCCCCCeEEEccCCCcchHH---HHHHhc
Confidence 456655 554 67777777766555 2 34555555568987 556678999999999999998852 244568
Q ss_pred CcEEEEeCCC-------CHHHHHhhhC------CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 118 GVVVKRVNTC-------DLDEVASAIG------PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 118 g~~~~~v~~~-------d~~~l~~~~~------~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
|.+++.++.+ |++++++.++ +++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+..
T Consensus 154 g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~~ 233 (428)
T 1iay_A 154 GVQLIPIHCESSNNFKITSKAVKEAYENAQKSNIKVKGLILTNPSNPLGTTLDKDTLKSVLSFTNQHNIHLVCDEIYAAT 233 (428)
T ss_dssp CCEEEEECCCTTTTTCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHTTTCEEEEECTTGGG
T ss_pred CCEEEEeecCCccCCcCCHHHHHHHHHHHHhcCCceEEEEEcCCCCCCCCcCCHHHHHHHHHHHHHCCeEEEEecccccc
Confidence 8999888753 7889988875 37899999999999999998 999999999999999999999753
Q ss_pred Ccc-----CCCC--CC-------cc--EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 182 VLS-----RPLE--LG-------AD--IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 182 ~~~-----~~~~--~~-------~d--i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
.+. +... .+ .| +++.|+||++ |.+|+|+|+++++++++.+.+...... ...+...+.++..
T Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~~d~viv~~s~sK~~-g~~Glr~G~~~~~~~~~~~~~~~~~~~--~~~~~~~~~a~~~ 310 (428)
T 1iay_A 234 VFDTPQFVSIAEILDEQEMTYCNKDLVHIVYSLSKDM-GLPGFRVGIIYSFNDDVVNCARKMSSF--GLVSTQTQYFLAA 310 (428)
T ss_dssp CCSSSCCCCHHHHHTSGGGTTSCTTSEEEEEESTTTS-SCGGGCEEEEEESCHHHHHHHHHHHTT--SCCCHHHHHHHHH
T ss_pred ccCCCCccCHHHhccccccccCCCCcEEEEecchhhc-CCCCceEEEEEeCCHHHHHHHHHHHhc--ccCCHHHHHHHHH
Confidence 221 1111 11 45 8999999999 556899999999666676655544332 3455666666666
Q ss_pred cCCcHH-------HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH------HhH
Q 016612 246 GVKTMA-------LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL------ALS 312 (386)
Q Consensus 246 ~~~~~~-------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~------~~~ 312 (386)
.++... ...+...++.+.+.+.+++.. +. ++ +...+.++++.++.. ...
T Consensus 311 ~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~------~~---~~~~g~~~~~~~~~~~~~~~~~~~ 372 (428)
T 1iay_A 311 MLSDEKFVDNFLRESAMRLGKRHKHFTNGLEVVG---------IK------CL---KNNAGLFCWMDLRPLLRESTFDSE 372 (428)
T ss_dssp HTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CC------BC---CCSSSSEEEEECGGGCSSSSHHHH
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------Cc------cc---CCCeeEEEEEechhhcCCCchhHH
Confidence 665432 223333444555555555431 11 11 011356677777532 235
Q ss_pred HHHHhhcCcc-eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhcC
Q 016612 313 KHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 313 ~~l~~~l~~~-gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~~ 384 (386)
..+.+.+... |+.+.+|..+. ...++++||+++ .++++++++.|++++++.
T Consensus 373 ~~l~~~l~~~~gi~v~~~~~~~---------------------~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~~ 427 (428)
T 1iay_A 373 MSLWRVIINDVKLNVSPGSSFE---------------------CQEPGWFRVCFANMDDGTVDIALARIRRFVGVE 427 (428)
T ss_dssp HHHHHHHHHTSCEECEEGGGGT---------------------CSSSSEEEEECSSSCHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHhCCEEEeCchhhC---------------------CCCCCEEEEEEecCCHHHHHHHHHHHHHHHhcc
Confidence 5677777654 88877665421 012567999997 377888888888887653
No 73
>2zc0_A Alanine glyoxylate transaminase; alanine:glyoxylate aminotransferase, archaea, thermococcus L transferase; HET: PMP; 2.30A {Thermococcus litoralis}
Probab=99.95 E-value=3.7e-27 Score=222.25 Aligned_cols=294 Identities=17% Similarity=0.191 Sum_probs=197.7
Q ss_pred ccCC-CCc-hHHHHHHHHHhhcCC--C--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEE
Q 016612 49 YTRS-GNP-TRDALESLLAKLDKA--D--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV 121 (386)
Q Consensus 49 y~~~-g~~-~~~~l~~~l~~~~g~--~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~ 121 (386)
|... |.+ +++++.+++.+.+|. + +.+++++|++++.+ +..++++||+|++++|+|+++. ..++..|.++
T Consensus 71 y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~ 146 (407)
T 2zc0_A 71 YTPANGIPELREELAAFLKKYDHLEVSPENIVITIGGTGALDLLGRVLIDPGDVVITENPSYINTL----LAFEQLGAKI 146 (407)
T ss_dssp CCCTTCCHHHHHHHHHHHHHHSCCCCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTTCEE
T ss_pred CCCCCCCHHHHHHHHHHHHHhcCCCCCcceEEEecCHHHHHHHHHHHhcCCCCEEEEeCCChHHHH----HHHHHcCCEE
Confidence 6655 554 677777777666673 2 45555666799874 5557789999999999998875 4455788888
Q ss_pred EEeCCC----CHHHHHhhhC----C--CceEEE-EeCCCCCCcccccHH---HHHHHHHHcCCEEEEeCCCCCCCcc---
Q 016612 122 KRVNTC----DLDEVASAIG----P--WTKLVW-VESPTNPRQQICDIR---KIAEMAHAHGALLLVDNSIMSPVLS--- 184 (386)
Q Consensus 122 ~~v~~~----d~~~l~~~~~----~--~~~~v~-~~~~~nptG~~~~l~---~i~~la~~~~~~li~D~a~~~~~~~--- 184 (386)
+.++.+ |++++++.++ + ++++|+ +++|+||||.+.|.+ +|.++|+++|+++|+|++|+...+.
T Consensus 147 ~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~ 226 (407)
T 2zc0_A 147 EGVPVDNDGMRVDLLEEKIKELKAKGQKVKLIYTIPTGQNPMGVTMSMERRKALLEIASKYDLLIIEDTAYNFMRYEGGD 226 (407)
T ss_dssp EEEEEETTEECHHHHHHHHHHHHHTTCCEEEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTSBSSCSS
T ss_pred EEcccCCCCCCHHHHHHHHHhhhcccCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEECCCcccccCCCC
Confidence 888763 8999998887 5 788874 689999999999865 9999999999999999999754331
Q ss_pred --CCCC---CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-------HHH
Q 016612 185 --RPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-------MAL 252 (386)
Q Consensus 185 --~~~~---~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 252 (386)
.... .+.++++.|+||+++ +|+|+|+++++ +++.+.+...........++..+.++...++. +..
T Consensus 227 ~~~~~~~~~~~~~i~~~s~sK~~~--~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 303 (407)
T 2zc0_A 227 IVPLKALDNEGRVIVAGTLSKVLG--TGFRIGWIIAE-GEILKKVLMQKQPIDFCAPAISQYIALEYLKRGYFEKYHLEG 303 (407)
T ss_dssp CCCGGGGCSSCCEEEEEESTTTTC--TTSCCEEEECC-HHHHHHHHHHHTTTTSSSCHHHHHHHHHHHHTTHHHHHTTTT
T ss_pred CCChhhcCCCCCEEEEcccccccC--CCcceEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHcCCchHHHHHH
Confidence 1111 246789999999995 57899999987 56666665554443334455555444333322 112
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc-eeccCCCCc
Q 016612 253 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSV 331 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~~~~G~~ 331 (386)
..+...++.+.+.+.+++.. +++. +. . +..+.++++.++......++.+.+... |+.+.+|..
T Consensus 304 ~~~~~~~~~~~l~~~L~~~~-------~~~~------~~--~-~~~~~~~~~~~~~~~~~~~l~~~l~~~~gi~v~~g~~ 367 (407)
T 2zc0_A 304 ALLGYKEKRDIMLKALENHL-------PNAE------FT--K-PIAGMFVMFFLPEGADGISFANELMEREGVVVVPGKP 367 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHC-------TTSC------BC--C-CSBSSEEEEECSTTCCHHHHHHHHHHHTCEECBCSGG
T ss_pred HHHHHHHHHHHHHHHHHHhC-------CCCE------Ee--c-CCCcEEEEEEcCCCCCHHHHHHHHHHhCCeEEECchh
Confidence 23334455555666665421 1111 11 0 123567788875433456777777777 888877754
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhcC
Q 016612 332 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRTG 384 (386)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~~ 384 (386)
+.. + +..++++|||++. ++++++++.|++++++.
T Consensus 368 ~~~---~----------------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 404 (407)
T 2zc0_A 368 FYT---D----------------ESGKNAIRLNFSRPSKEEIPIGIKKLAKLYKEK 404 (407)
T ss_dssp GCS---S----------------SCCTTEEEEECSSSCTTHHHHHHHHHHHHHHHH
T ss_pred ccC---C----------------CCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHHH
Confidence 210 0 0135789999974 78888999998888653
No 74
>3tcm_A Alanine aminotransferase 2; pyridoxal phosphate (PLP)-binding; HET: DCS; 2.71A {Hordeum vulgare}
Probab=99.95 E-value=2.2e-27 Score=229.21 Aligned_cols=296 Identities=15% Similarity=0.101 Sum_probs=196.1
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHHH-HHhc-CCCCEEEecCCCCCcHHHHHhhhccc
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAAV-THLL-GTGEEIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~~-~~~~-~~g~~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
....|... |.+ +++++.+++.+..|. ++.++++++++++..+ ..++ ++||.|++++|.|+++. ..++.
T Consensus 126 ~~~~Y~~~~G~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~~~al~~~~~~l~~~~gd~Vlv~~p~y~~~~----~~~~~ 201 (500)
T 3tcm_A 126 ATGAYSHSQGIHGLRDAIASGIASRDGFPANADDIFLTDGASPGVHLMMQLLIRNEKDGILVPIPQYPLYS----ASIAL 201 (500)
T ss_dssp CSSSCCCTTCCHHHHHHHHHHHHHHHSSCCCGGGEEEESSSHHHHHHHHHHHCCSTTEEEEEEESCCTHHH----HHHHH
T ss_pred cCCCcCCCcChHHHHHHHHHHHHhhcCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCEEEEeCCCcHhHH----HHHHH
Confidence 45678877 776 788999988877663 3566777778999755 4466 79999999999999886 44556
Q ss_pred CCcEEEEeCC-------CCHHHHHhhhCC------CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 117 TGVVVKRVNT-------CDLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 117 ~g~~~~~v~~-------~d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
.|.+++.++. .|+++|++.+++ ++++|++++|+||||.+++ +++|+++|+++|+++|+|++|+.
T Consensus 202 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~k~ivl~~p~NPtG~~~s~~~l~~i~~la~~~~~~li~Deay~~ 281 (500)
T 3tcm_A 202 HGGALVPYYLNESTGWGLETSDVKKQLEDARSRGINVRALVVINPGNPTGQVLAEENQYDIVKFCKNEGLVLLADEVYQE 281 (500)
T ss_dssp TTCEEEEEECBTTTTSBCCHHHHHHHHHHHHHTTCEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTT
T ss_pred cCCEEEEEecccccCCCCCHHHHHHHHHHHHhcCCCceEEEEECCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccc
Confidence 7888888874 378999998875 7899999999999999986 67788889999999999999876
Q ss_pred CCccCC------------C---CC-CccEEEeccccccccCCCceEEEEEEc--ChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 181 PVLSRP------------L---EL-GADIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 181 ~~~~~~------------~---~~-~~di~~~S~sK~~~g~~g~~~G~i~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
..+... . .. ...+++.|+||.+.|.+|+|+||+++. ++.+.+.+...... ....+...+.+
T Consensus 282 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~i~~~S~SK~~~g~~G~R~G~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~q~~ 360 (500)
T 3tcm_A 282 NIYVDNKKFHSFKKIVRSLGYGEEDLPLVSYQSVSKGYYGECGKRGGYFEITGFSAPVREQIYKIASV-NLCSNITGQIL 360 (500)
T ss_dssp CBCCTTCCCCCHHHHHHHTTCSSSCCCEEEEEESSSTTTCCGGGCCEEEEEESCCTTHHHHHHHHHHT-TCCCCHHHHHH
T ss_pred cccCCCCCCCcHHHHHHHhccccCCeEEEEEecCCccCCCCCccceEEEEEeCCCHHHHHHHHHHHhc-ccCCCHHHHHH
Confidence 443210 0 11 124788899999866778999999982 35565555544432 23344444444
Q ss_pred HHhcCC--------------cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-EeC
Q 016612 243 CLRGVK--------------TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LTG 307 (386)
Q Consensus 243 ~~~~~~--------------~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~~ 307 (386)
+...+. ......+.+.++.+.+.+.|++.+ ++.+. ...++++.| .+.
T Consensus 361 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~--------------g~~~~----~~~g~~~~~~~~~ 422 (500)
T 3tcm_A 361 ASLVMNPPKASDESYASYKAEKDGILASLARRAKALEHAFNKLE--------------GITCN----EAEGAMYVFPQIC 422 (500)
T ss_dssp HHHHHSCCCSSSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTST--------------TEECC----CCCBTTEECCEEC
T ss_pred HHHHhcCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CcEEe----cCCeEEEEeeeec
Confidence 433322 112223344455555555655432 22221 223455544 332
Q ss_pred CHH-------------hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHH
Q 016612 308 SLA-------------LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVND 372 (386)
Q Consensus 308 ~~~-------------~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~ 372 (386)
.+. ....+.+.+...|+.+.+|..+.. ..+.++||++++ .+++++
T Consensus 423 lp~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pg~~f~~--------------------~~g~~~iRis~~~~~e~i~~ 482 (500)
T 3tcm_A 423 LPQKAIEAAKAANKAPDAFYALRLLESTGIVVVPGSGFGQ--------------------VPGTWHFRCTILPQEDKIPA 482 (500)
T ss_dssp CCHHHHHHHHHHTSCHHHHHHHHHHHHHCEECEESTTTCC--------------------CTTCCBEEEESCSCTTTHHH
T ss_pred CchhhHHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC--------------------CCCCCEEEEEECCCHHHHHH
Confidence 211 111123455556888877765321 013567999997 477889
Q ss_pred HHHHHHHHHhc
Q 016612 373 LISDLDKALRT 383 (386)
Q Consensus 373 ~i~~l~~~l~~ 383 (386)
++++|.+++++
T Consensus 483 ~i~~l~~~~~~ 493 (500)
T 3tcm_A 483 VISRFTVFHEA 493 (500)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999888764
No 75
>2x5f_A Aspartate_tyrosine_phenylalanine pyridoxal-5' phosphate-dependent aminotransferase...; HET: PLP EPE; 1.80A {Staphylococcus aureus}
Probab=99.95 E-value=2.3e-26 Score=218.39 Aligned_cols=320 Identities=12% Similarity=0.094 Sum_probs=206.2
Q ss_pred eeeccCCCCC-CCCCcccce--eeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhc-CCC--c---eEEeCcHH
Q 016612 12 LLMNFSNEFD-PYGALSTPL--YQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLD-KAD--R---ALCFTSGM 80 (386)
Q Consensus 12 ~~~~~~~~~~-~~g~~~~~~--~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~-g~~--~---~i~~~~gt 80 (386)
.+++++.+.. .+|. ++.+ .++. ...+.......|... |.+ +++++.+++.+.. +.+ + .+++++|+
T Consensus 48 ~~i~l~~g~~~~~~~-~~~~~~~~a~---~~~~~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~i~~t~g~~ 123 (430)
T 2x5f_A 48 TTYNATIGMATNKDG-KMFASSLDAM---FNDLTPDEIFPYAPPQGIEELRDLWQQKMLRDNPELSIDNMSRPIVTNALT 123 (430)
T ss_dssp CSEECCCSSCEETTE-ECCCHHHHTT---BSSCCGGGTSSCCCTTCCHHHHHHHHHHHHHHCTTCCGGGBCCCEEESHHH
T ss_pred CcEEeeeeeccCCCC-chhhHHHHHH---HHhcCcccccccCCCCCCHHHHHHHHHHHhccCcccCCCccceEEEcCCch
Confidence 4678885544 4553 3333 2211 111111134567665 554 5666666665432 443 5 55666667
Q ss_pred HHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhccc-CCcEEEEeCCC------CHHHHHhhhCC---CceEEEEeCCC
Q 016612 81 AALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-TGVVVKRVNTC------DLDEVASAIGP---WTKLVWVESPT 149 (386)
Q Consensus 81 ~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-~g~~~~~v~~~------d~~~l~~~~~~---~~~~v~~~~~~ 149 (386)
+++.+ +..++++||+|++++|+|+++. ..++. .|.+++.++.+ |++++++.+++ +++++++++|+
T Consensus 124 ~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~~g~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~ 199 (430)
T 2x5f_A 124 HGLSLVGDLFVNQDDTILLPEHNWGNYK----LVFNTRNGANLQTYPIFDKDGHYTTDSLVEALQSYNKDKVIMILNYPN 199 (430)
T ss_dssp HHHHHHHHHHCCTTCEEEEESSCCTHHH----HHHTTTTCCEEEEECCBCTTSCBCSHHHHHHHHHCCSSEEEEEECSSC
T ss_pred HHHHHHHHHHhCCCCEEEEcCCcCccHH----HHHHHhcCCeEEEEeccCccCCcCHHHHHHHHHhcCCCCEEEEEcCCC
Confidence 99974 5557899999999999999885 44556 88998888752 68899988875 88999999999
Q ss_pred CCCccccc---HHHHHHHHHH-----cCCEEEEeCCCCCCCcc-----CCC----C-CCc---cEEEeccccccccCCCc
Q 016612 150 NPRQQICD---IRKIAEMAHA-----HGALLLVDNSIMSPVLS-----RPL----E-LGA---DIVMHSATKFIAGHSDV 208 (386)
Q Consensus 150 nptG~~~~---l~~i~~la~~-----~~~~li~D~a~~~~~~~-----~~~----~-~~~---di~~~S~sK~~~g~~g~ 208 (386)
||||.+.+ +++|.++|++ +|+++|+|++|+..... ... . .+. +++++|+||++ |.+|+
T Consensus 200 nptG~~~~~~~l~~i~~~~~~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~ 278 (430)
T 2x5f_A 200 NPTGYTPTHKEVTTIVEAIKALANKGTKVIAVVDDAYYGLFYEDVYTQSLFTALTNLHSNAILPIRLDGATKEF-FAWGF 278 (430)
T ss_dssp TTTCCCCCHHHHHHHHHHHHHHHHTTCEEEEEEECTTTTCBCSSSCCSCHHHHHHTTCCTTEEEEEEEEHHHHT-TCGGG
T ss_pred CCCCCcCCHHHHHHHHHHHHhhhhccCCEEEEEehhcccccCCcccchHHHHHHhhccCCcceEEEEEecccCC-CCCCC
Confidence 99999998 8999999999 99999999998753321 111 1 345 78899999999 44578
Q ss_pred eEEEEEE--cChhHHHHHHHhhhh----cCCCCChhhHHHHHhcCC-c---HHH---HHHHHHHHHHHHHHHHhhCCCcc
Q 016612 209 MAGVLAV--KGERLAKELYFLQNA----EGSGLAPFDCWICLRGVK-T---MAL---RVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 209 ~~G~i~~--~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~-~---~~~---~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
|+|++++ +++.+.+.+...... .....+...++++...++ . ... ..+.+.++.+.+.+.+++..
T Consensus 279 riG~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--- 355 (430)
T 2x5f_A 279 RVGFMTFGTSDQTTKEVLEAKVKGLIRSNISSGPLPTQSAVKHVLKNNKQFDKEIEQNIQTLKERYEVTKEVVYADQ--- 355 (430)
T ss_dssp CCEEEEEBCCCHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHHHTCGG---
T ss_pred CeEEEEEecCCHHHHHHHHHHHhhhhhcccCCCChHHHHHHHHHHccChHHHHHHHHHHHHHHHHHHHHHHHHHhhC---
Confidence 9999999 235566555544433 334566666666655554 3 111 23333444444445544210
Q ss_pred eEecCCCCCCCchhhhhhccCCC-CceEEEEeCCHHhHHHHHhhcCc-ceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 276 KVNYAGLPEHPGHELHYSQAKGA-GSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 276 ~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~-~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
... ++.+. ... +.++++.+++ .....+.+.+.. +|+.+.+|.
T Consensus 356 -------~~~-g~~~~----~~~~g~~~~~~~~~-~~~~~~~~~l~~~~gi~v~~g~----------------------- 399 (430)
T 2x5f_A 356 -------YHS-HWQAY----DFNSGYFMAIKVHD-VDPEALRKHLIDKYSIGVIALN----------------------- 399 (430)
T ss_dssp -------GTT-TEEEC----CCCBSSEEEEEESS-SCHHHHHHHHHHHHCEECEECS-----------------------
T ss_pred -------CCC-Cceee----CCCceEEEEeCCCC-CCHHHHHHHHHHhCCEEEecCC-----------------------
Confidence 000 11111 112 3457777762 235567777766 788776541
Q ss_pred cCCCCCeEEEEec---cCChHHHHHHHHHHHhc
Q 016612 354 RGLTEDLVRISVG---IEDVNDLISDLDKALRT 383 (386)
Q Consensus 354 ~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~ 383 (386)
++++|||++ .++++++++.|++++++
T Consensus 400 ----~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 428 (430)
T 2x5f_A 400 ----ATDIRIAFSCVEKDDIPHVFDSIAKAIDD 428 (430)
T ss_dssp ----SSEEEEEGGGSCGGGHHHHHHHHHHHHHH
T ss_pred ----CCeEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 456999998 47799999999988865
No 76
>3hdo_A Histidinol-phosphate aminotransferase; PSI-II, histidinol-phosphate aminotrans structural genomics, protein structure initiative; 1.61A {Geobacter metallireducens gs-15}
Probab=99.95 E-value=5e-27 Score=217.69 Aligned_cols=276 Identities=16% Similarity=0.145 Sum_probs=191.2
Q ss_pred HHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHH
Q 016612 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVA 133 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~ 133 (386)
..++++.+++++|.+ +.+++++|++++. ++.+++++||+|++++|+|+++. ..++..|.+++.++.++.-.++
T Consensus 67 ~~~lr~~la~~~g~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~ 142 (360)
T 3hdo_A 67 SQKLREVAGELYGFDPSWIIMANGSDEVLNNLIRAFAAEGEEIGYVHPSYSYYG----TLAEVQGARVRTFGLTGDFRIA 142 (360)
T ss_dssp CHHHHHHHHHHHTCCGGGEEEESSHHHHHHHHHHHHCCTTCEEEEESSSCTHHH----HHHHHHTCEEEEECBCTTSSBT
T ss_pred hHHHHHHHHHHhCcCcceEEEcCCHHHHHHHHHHHHhCCCCEEEEcCCChHHHH----HHHHHCCCEEEEeeCCCCCCHH
Confidence 367888888888854 6777777789987 45667899999999999999886 4455778999999875322222
Q ss_pred hhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC----CCCCccEEEeccccccccCCCc
Q 016612 134 SAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP----LELGADIVMHSATKFIAGHSDV 208 (386)
Q Consensus 134 ~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~----~~~~~di~~~S~sK~~~g~~g~ 208 (386)
+... .+++++++++|+||||.+.|+++|.++|+++|+++|+|++|+....... ...+.+++++|+||++ |.+|+
T Consensus 143 ~l~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~ 221 (360)
T 3hdo_A 143 GFPERYEGKVFFLTTPNAPLGPSFPLEYIDELARRCAGMLVLDETYAEFAESNALELVRRHENVVVTRTLSKSY-SLAGM 221 (360)
T ss_dssp TCCSSBCSSEEEEESSCTTTCCCCCHHHHHHHHHHBSSEEEEECTTGGGSSCCCTHHHHHCSSEEEEEESTTTT-SCTTS
T ss_pred HHHhhcCCCEEEEeCCCCCCCCCcCHHHHHHHHHHCCCEEEEECChHhhCCcchhHHhccCCCEEEEecchHhh-cCCcc
Confidence 2222 2467999999999999999999999999999999999999874211111 1235679999999999 55678
Q ss_pred eEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCC
Q 016612 209 MAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEH 285 (386)
Q Consensus 209 ~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~ 285 (386)
|+|+++++ +++.+.+...... .+.+...+.++...++. +..+.++..++.+.+.+.+++.. + .
T Consensus 222 r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~-~--------~-- 287 (360)
T 3hdo_A 222 RIGLAIAR-PEVIAALDKIRDH--YNLDRLAQAACVAALRDQAYLSECCRRIRETREWFTTELRSIG-Y--------D-- 287 (360)
T ss_dssp CCEEEECC-HHHHHHHHHHSCS--CCSCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHTT-C--------E--
T ss_pred ceeeEeeC-HHHHHHHHHhCCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHCC-C--------E--
Confidence 99999985 5666656554432 34566666655554443 33444555566666666666541 1 1
Q ss_pred CchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe
Q 016612 286 PGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV 365 (386)
Q Consensus 286 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~ 365 (386)
+. +..+.++++.+++. ...++.+.+...|+.+++|.. + ..++++|||+
T Consensus 288 ----~~----~~~~~~~~~~~~~~-~~~~l~~~l~~~gi~v~~~~~------~-----------------~~~~~iRis~ 335 (360)
T 3hdo_A 288 ----VI----PSQGNYLFATPPDR-DGKRVYDGLYARKVLVRHFSD------P-----------------LLAHGMRISI 335 (360)
T ss_dssp ----EC----CCSSSEEEEECTTC-CHHHHHHHHHHTTEECBCCCS------T-----------------TTTTSEEEEC
T ss_pred ----Ec----CCCccEEEEECCCC-CHHHHHHHHHHCCEEEEECCC------C-----------------CCCCEEEEEc
Confidence 10 23467788877543 356677777778888776543 0 1256799999
Q ss_pred c-cCChHHHHHHHHHHHhc
Q 016612 366 G-IEDVNDLISDLDKALRT 383 (386)
Q Consensus 366 ~-~~~~~~~i~~l~~~l~~ 383 (386)
+ .++++++++.|++..+.
T Consensus 336 ~~~~e~~~l~~al~~~~~~ 354 (360)
T 3hdo_A 336 GTREEMEQTLAALKEIGEG 354 (360)
T ss_dssp CCHHHHHHHHHHHHHHHC-
T ss_pred CCHHHHHHHHHHHHHHhcc
Confidence 7 47788888888776654
No 77
>1kmj_A Selenocysteine lyase; persulfide perselenide NIFS pyridoxal phosphate, structural PSI, protein structure initiative; HET: PLP; 2.00A {Escherichia coli} SCOP: c.67.1.3 PDB: 1i29_A* 1jf9_A* 1kmk_A* 1c0n_A*
Probab=99.95 E-value=5.7e-27 Score=220.59 Aligned_cols=293 Identities=18% Similarity=0.205 Sum_probs=196.2
Q ss_pred chHHHHHHHHHhhcCC---CceEEeCcHHHHHHH-HHHh----cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 55 PTRDALESLLAKLDKA---DRALCFTSGMAALAA-VTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~-~~~~----~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
+...++++.+++++|. ++.+++++|++|+.+ +.++ +++||+|++++|+|++....+..+++..|.+++.++.
T Consensus 67 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 146 (406)
T 1kmj_A 67 EKMENVRKRASLFINARSAEELVFVRGTTEGINLVANSWGNSNVRAGDNIIISQMEHHANIVPWQMLCARVGAELRVIPL 146 (406)
T ss_dssp HHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHTCEEEEECB
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEEeCChhHHHHHHHHHhhhhcCCCCCEEEEecccchHHHHHHHHHHHhCCCEEEEEec
Confidence 3578899999999998 256666777899874 4556 7899999999999998765555666778889988886
Q ss_pred C-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccc
Q 016612 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (386)
Q Consensus 127 ~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK 200 (386)
+ |++++++.+++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... +....++|++++|+||
T Consensus 147 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~g~~~~~~~~~~~d~~~~s~~K 226 (406)
T 1kmj_A 147 NPDGTLQLETLPTLFDEKTRLLAITHVSNVLGTENPLAEMITLAHQHGAKVLVDGAQAVMHHPVDVQALDCDFYVFSGHK 226 (406)
T ss_dssp CTTSCBCGGGHHHHCCTTEEEEEEESBCTTTCCBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGG
T ss_pred CCCCCcCHHHHHHHhccCCeEEEEeCCCccccCcCCHHHHHHHHHHcCCEEEEEchhhcCCCCCcccccCCCEEEEEchh
Confidence 3 789999999989999999999999999999999999999999999999999876543 2223478999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhhhh---------------------cCCCCChhhHHHHH-hcCCcH-----HHH
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNA---------------------EGSGLAPFDCWICL-RGVKTM-----ALR 253 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~-~~~~~~-----~~~ 253 (386)
.+ |+.| +|+++++ +++.+.+...... ...+.+...+.+.+ .+++.+ ...
T Consensus 227 ~~-g~~G--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~ 302 (406)
T 1kmj_A 227 LY-GPTG--IGILYVK-EALLQEMPPWEGGGSMIATVSLSEGTTWTKAPWRFEAGTPNTGGIIGLGAALEYVSALGLNNI 302 (406)
T ss_dssp TT-SCTT--CEEEEEC-HHHHHHCCCSSCSTTSEEEEETTTEEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHH
T ss_pred cc-CCCC--cEEEEEe-HHHHhhcCCcccCCCceeecccccccccCCCchhccCCCCCHHHHHHHHHHHHHHHHcCHHHH
Confidence 98 6666 6999987 5555544322210 11122333333222 222222 222
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccc
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKS 333 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~ 333 (386)
.++..++.+.+.+.+++.+ ++.++.+. ..++++.|.+++. ....+.+.+...|+.+++|..+.
T Consensus 303 ~~~~~~~~~~l~~~L~~~~--------------~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~ 365 (406)
T 1kmj_A 303 AEYEQNLMHYALSQLESVP--------------DLTLYGPQ--NRLGVIAFNLGKH-HAYDVGSFLDNYGIAVRTGHHCA 365 (406)
T ss_dssp HHHHHHHHHHHHHHHTTST--------------TEEEESCT--TCCSEEEEEETTC-CHHHHHHHHHHTTEECEEECTTC
T ss_pred HHHHHHHHHHHHHHHhcCC--------------CeEEecCC--CcCCEEEEEECCC-CHHHHHHHHhhCCcEEEeccccc
Confidence 3334444555555554432 22222111 1467888887532 24566677777788877665321
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.|. ....+ .++++||+++. ++++++++.|+++++.
T Consensus 366 ---~~~-----------~~~~g-~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 404 (406)
T 1kmj_A 366 ---MPL-----------MAYYN-VPAMCRASLAMYNTHEEVDRLVTGLQRIHRL 404 (406)
T ss_dssp ---HHH-----------HHHTT-CSCEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---hHH-----------HHhcC-CCCeEEEEeecCCCHHHHHHHHHHHHHHHHh
Confidence 010 00111 15789999986 4666666666666543
No 78
>3piu_A 1-aminocyclopropane-1-carboxylate synthase; fruit ripening, ethylene biosynthesis, lyase, pyridoxal 5'-P binding; HET: LLP PLR; 1.35A {Malus domestica} SCOP: c.67.1.4 PDB: 1m4n_A* 1m7y_A* 1ynu_A* 1b8g_A*
Probab=99.95 E-value=3e-26 Score=217.94 Aligned_cols=291 Identities=15% Similarity=0.142 Sum_probs=193.2
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcC------CCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcc-c
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDK------ADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-K 116 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g------~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~-~ 116 (386)
..|.+. |.+ +++++.+++.+..+ .++.+++++|++++. ++..++++||.|++++|.|+++. ..+. .
T Consensus 80 ~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~~v~~~~gg~~a~~~~~~~l~~~gd~vl~~~p~~~~~~----~~~~~~ 155 (435)
T 3piu_A 80 ALFQDYHGLPAFKKAMVDFMAEIRGNKVTFDPNHLVLTAGATSANETFIFCLADPGEAVLIPTPYYPGFD----RDLKWR 155 (435)
T ss_dssp HHCCCTTCCHHHHHHHHHHHHHHTTTSSCCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHTTTT
T ss_pred cccCCCCCcHHHHHHHHHHHHHhhCCCCCCCHHHEEEcCChHHHHHHHHHHhcCCCCeEEECCCccccHH----HHHHHh
Confidence 456665 554 66666666665443 346777777789987 45667899999999999999886 3344 6
Q ss_pred CCcEEEEeCCC-------CHHHHHhhhCC------CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 117 TGVVVKRVNTC-------DLDEVASAIGP------WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 117 ~g~~~~~v~~~-------d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
.|.+++.++.+ |++++++++++ ++++|++++|+||||.+.+ +++|.++|++||+++|+||+|+.
T Consensus 156 ~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~v~i~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~Dea~~~ 235 (435)
T 3piu_A 156 TGVEIVPIHCTSSNGFQITETALEEAYQEAEKRNLRVKGVLVTNPSNPLGTTMTRNELYLLLSFVEDKGIHLISDEIYSG 235 (435)
T ss_dssp TCCEEEEEECCGGGTSCCCHHHHHHHHHHHHHTTCCEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGG
T ss_pred cCCEEEEeeCCCccCCcCCHHHHHHHHHHHHhcCCCeEEEEEcCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEeccccc
Confidence 88999888864 78999988864 8999999999999999986 58899999999999999999875
Q ss_pred CCccC-----C----CC---------CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 181 PVLSR-----P----LE---------LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 181 ~~~~~-----~----~~---------~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
..+.. . .+ .+.++++.|+||++ |.+|+|+|+++++++.+.+.+....... ..++..+.+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~i~i~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 312 (435)
T 3piu_A 236 TAFSSPSFISVMEVLKDRNCDENSEVWQRVHVVYSLSKDL-GLPGFRVGAIYSNDDMVVAAATKMSSFG--LVSSQTQHL 312 (435)
T ss_dssp GCCSSSCCCCHHHHHHC-------CGGGGEEEEEESSSSS-CCGGGCEEEEEESCHHHHHHHHHHGGGS--CCCHHHHHH
T ss_pred cccCCCCCcCHHHhccccccccccCCCCCEEEEEeeeccc-CCCceeEEEEEeCCHHHHHHHHHHhhcC--CCCHHHHHH
Confidence 33211 0 01 23458899999999 5567899999997777766555444332 234444444
Q ss_pred HHhcCCcH-------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHH-----
Q 016612 243 CLRGVKTM-------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA----- 310 (386)
Q Consensus 243 ~~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~----- 310 (386)
+...+... ....+++.++.+.+.+.+++.. + .+. ....+.++++.++...
T Consensus 313 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~------~~~---~~~~g~~~~~~l~~~~~~~~~ 374 (435)
T 3piu_A 313 LSAMLSDKKLTKNYIAENHKRLKQRQKKLVSGLQKSG---------I------SCL---NGNAGLFCWVDMRHLLRSNTF 374 (435)
T ss_dssp HHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT---------C------EEC---CCCSSSEEEEECGGGSSSSSH
T ss_pred HHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---------C------ccc---CCCeeEEEEEEcccccccCCc
Confidence 33333221 2223334444455555555431 1 111 0112467777775421
Q ss_pred -hHHHHHhhcCcc-eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 311 -LSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 311 -~~~~l~~~l~~~-gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
...++.+.+... |+.+.+|..+. ...++++||+++. +++++.++.|++++++
T Consensus 375 ~~~~~~~~~l~~~~gi~v~~g~~~~---------------------~~~~~~iRi~~~~~~~e~i~~~l~~l~~~l~~ 431 (435)
T 3piu_A 375 EAEMELWKKIVYEVHLNISPGSSCH---------------------CTEPGWFRVCFANLPERTLDLAMQRLKAFVGE 431 (435)
T ss_dssp HHHHHHHHHHHHTSCEECEEGGGGT---------------------CSSTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHCCEEEeCCcccC---------------------CCCCCEEEEEeeCCCHHHHHHHHHHHHHHHHH
Confidence 345566665444 88777665421 1136789999964 7788888888888765
No 79
>1t3i_A Probable cysteine desulfurase; PLP-binding enzyme, transferase; HET: 2OS PLP; 1.80A {Synechocystis SP} SCOP: c.67.1.3
Probab=99.95 E-value=6.6e-27 Score=221.21 Aligned_cols=296 Identities=21% Similarity=0.193 Sum_probs=201.4
Q ss_pred chHHHHHHHHHhhcCC---CceEEeCcHHHHHHH-HHHh----cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 55 PTRDALESLLAKLDKA---DRALCFTSGMAALAA-VTHL----LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~-~~~~----~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
+...++++.+++++|. ++.+++++|++|+.+ +..+ +++||+|++++|+|++....+...++..|.+++.++.
T Consensus 72 ~~~~~l~~~la~~~~~~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 151 (420)
T 1t3i_A 72 DAYEAVRNKVAKFINARSPREIVYTRNATEAINLVAYSWGMNNLKAGDEIITTVMEHHSNLVPWQMVAAKTGAVLKFVQL 151 (420)
T ss_dssp HHHHHHHHHHHHHTTCSCGGGEEEESSHHHHHHHHHHHTHHHHCCTTCEEEEETTCCGGGTHHHHHHHHHHCCEEEEECB
T ss_pred HHHHHHHHHHHHHcCCCCCCeEEEcCChHHHHHHHHHHhhhcccCCCCEEEECcchhHHHHHHHHHHHHhcCcEEEEecc
Confidence 4577899999999998 467777888899874 4556 7899999999999998644444566677889988886
Q ss_pred -----CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccc
Q 016612 127 -----CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (386)
Q Consensus 127 -----~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK 200 (386)
.|++++++++++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... +....+.|++++|+||
T Consensus 152 ~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~sK 231 (420)
T 1t3i_A 152 DEQESFDLEHFKTLLSEKTKLVTVVHISNTLGCVNPAEEIAQLAHQAGAKVLVDACQSAPHYPLDVQLIDCDWLVASGHK 231 (420)
T ss_dssp CTTSSBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEEGGG
T ss_pred CCCCCcCHHHHHHhhCCCceEEEEeCCcccccCcCCHHHHHHHHHHcCCEEEEEhhhccCCccCchhhcCCCEEEEehhh
Confidence 3899999999999999999999999999999999999999999999999999877653 2333478999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhhhh--------------------cCCCCChhhHHHHHh-cCCc-----HHHHH
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNA--------------------EGSGLAPFDCWICLR-GVKT-----MALRV 254 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~-~~~~-----~~~~~ 254 (386)
.+ |+.| +|+++++ +++.+.+...... ...+.+...+.+.+. +++. +....
T Consensus 232 ~~-~~~g--~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~ 307 (420)
T 1t3i_A 232 MC-APTG--IGFLYGK-EEILEAMPPFFGGGEMIAEVFFDHFTTGELPHKFEAGTPAIAEAIALGAAVDYLTDLGMENIH 307 (420)
T ss_dssp TT-SCTT--CEEEEEC-HHHHHHSCCCSCSTTSEEEECSSCEEECCTTGGGCCSSCCHHHHHHHHHHHHHHHHHCHHHHH
T ss_pred hc-CCCc--eEEEEEc-hHHHhhcCceecCCCccccccccccCCCCchhhccCCCccHHHHHHHHHHHHHHHHhHHHHHH
Confidence 76 5666 7999987 4455444322211 111233333333222 2222 23334
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhcc-C-CCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQA-K-GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVK 332 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~ 332 (386)
++..++.+.+.+.|++.+. +.+..+.. . ..+++++|.+++. ...++.+.+...|+.+.+|..+
T Consensus 308 ~~~~~~~~~l~~~L~~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~~~~~ 372 (420)
T 1t3i_A 308 NYEVELTHYLWQGLGQIPQ--------------LRLYGPNPKHGDRAALASFNVAGL-HASDVATMVDQDGIAIRSGHHC 372 (420)
T ss_dssp HHHHHHHHHHHHHHHTCTT--------------EEEESCCGGGSCBCSEEEEEETTB-CHHHHHHHHHTTTEECBCSCTT
T ss_pred HHHHHHHHHHHHHHHhCCC--------------eEEeCCCccccccCCEEEEEECCC-CHHHHHHHHHHCCeEEeecccc
Confidence 4555566666666665432 11111100 0 2478888888642 3556777777788988877542
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
. .|. ....+. ++++|||++. ++++++++.|+++++.+
T Consensus 373 ~---~~~-----------~~~~g~-~~~iRis~~~~~~~~~i~~~~~~l~~~~~~~ 413 (420)
T 1t3i_A 373 T---QPL-----------HRLFDA-SGSARASLYFYNTKEEIDLFLQSLQATIRFF 413 (420)
T ss_dssp C---HHH-----------HHHTTC-CCCEEEECCTTCCHHHHHHHHHHHHHHHHHT
T ss_pred c---hHH-----------HHhcCC-CCeEEEecCCCCCHHHHHHHHHHHHHHHHHh
Confidence 1 110 001111 5679999975 56677777777766543
No 80
>2z9v_A Aspartate aminotransferase; pyridoxamine, pyruvate; HET: PXM; 1.70A {Mesorhizobium loti} PDB: 2z9u_A* 2z9w_A* 2z9x_A*
Probab=99.95 E-value=4.2e-27 Score=220.66 Aligned_cols=287 Identities=15% Similarity=0.092 Sum_probs=193.5
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
...++++.+++++|.+ +.+++++|++++.+ +..++++||+|++++++|+++. +..+++..|.+++.++.+
T Consensus 43 ~~~~l~~~la~~~g~~~~~v~~t~g~t~a~~~~~~~~~~~gd~Vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~ 120 (392)
T 2z9v_A 43 LYEKVVDKAQKAMRLSNKPVILHGEPVLGLEAAAASLISPDDVVLNLASGVYGKG--FGYWAKRYSPHLLEIEVPYNEAI 120 (392)
T ss_dssp HHHHHHHHHHHHTTCSSCCEEESSCTHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHHCSCEEEEECCTTSCC
T ss_pred HHHHHHHHHHHHhCCCCCEEEEeCCchHHHHHHHHHhcCCCCEEEEecCCcccHH--HHHHHHHcCCceEEeeCCCCCCC
Confidence 5788999999999976 45556777899874 5557899999999999998763 234455678888888753
Q ss_pred CHHHHHhhh--CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccccc
Q 016612 128 DLDEVASAI--GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (386)
Q Consensus 128 d~~~l~~~~--~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (386)
|++++++.+ ++++++|++++++||||.+.|+++|.++|+++|+++|+|++++.+... +....+.|++++|+||+++|
T Consensus 121 d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~sK~~~~ 200 (392)
T 2z9v_A 121 DPQAVADMLKAHPEITVVSVCHHDTPSGTINPIDAIGALVSAHGAYLIVDAVSSFGGMKTHPEDCKADIYVTGPNKCLGA 200 (392)
T ss_dssp CHHHHHHHHHHCTTCCEEEEESEEGGGTEECCHHHHHHHHHHTTCEEEEECTTTBTTBSCCGGGGTCSEEEECSSSTTCC
T ss_pred CHHHHHHHHhcCCCCcEEEEeccCCCCceeccHHHHHHHHHHcCCeEEEEcccccCCcccccccccceEEEecCcccccC
Confidence 899999998 468999999999999999999999999999999999999999876543 22234789999999998877
Q ss_pred CCCceEEEEEEcChhHHHHHHHhh-------------------h-hcCCCCChhhHHHHHhcCCc-----HHHHHHHHHH
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQ-------------------N-AEGSGLAPFDCWICLRGVKT-----MALRVEKQQD 259 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~-------------------~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 259 (386)
+.| .|++++++ .+.+.+.... . ......+......+..+++. +....++..+
T Consensus 201 ~~g--~G~l~~~~-~~~~~l~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~~~ 277 (392)
T 2z9v_A 201 PPG--LTMMGVSE-RAWAKMKANPLAPRASMLSIVDWENAWSRDKPFPFTPSVSEINGLDVALDLYLNEGPEAVWARHAL 277 (392)
T ss_dssp CSC--CEEEEECH-HHHHHHHTCTTSCCSSTTCSGGGTTTTSTTSCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHH
T ss_pred CCc--eeEEEECH-HHHHHhhhccCCCCceeccHHHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 777 49998874 4544443211 0 00112222222222222222 2233444455
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc-eeccCCCCcccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMP 338 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~~~~G~~~~~~~~p 338 (386)
+.+.+.+.+++. . +.-... ......+.++++.++......++.+.+... |+.+.+|...
T Consensus 278 ~~~~l~~~L~~~-g--------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~gi~v~~g~~~------ 337 (392)
T 2z9v_A 278 TAKAMRAGVTAM-G--------LSVWAA-----SDSIASPTTTAVRTPDGVDEKALRQAARARYGVVFSSGRGE------ 337 (392)
T ss_dssp HHHHHHHHHHHT-T--------CCBSSS-----SGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECEECCGG------
T ss_pred HHHHHHHHHHHc-C--------CeeccC-----CccccCCceEEEECCCCCCHHHHHHHHHhcCCEEEecCCCC------
Confidence 555566666543 1 111100 000113567888875333356677777765 8877665531
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEe-c----cCChHHHHHHHHHHHhcC
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISV-G----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~-~----~~~~~~~i~~l~~~l~~~ 384 (386)
..++++|+|+ + .++++++++.|++++++.
T Consensus 338 -----------------~~~~~lRi~~~~~~~~~~~i~~~~~~l~~~~~~~ 371 (392)
T 2z9v_A 338 -----------------TLGKLTRIGHMGPTAQPIYAIAALTALGGAMNAA 371 (392)
T ss_dssp -----------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHHT
T ss_pred -----------------CCCCeEEEeCcccccCHHHHHHHHHHHHHHHHHc
Confidence 1256799995 4 377888888888888764
No 81
>3vax_A Putative uncharacterized protein DNDA; desulfurase, transferase; HET: PLP; 2.40A {Streptomyces lividans}
Probab=99.95 E-value=2.2e-27 Score=223.18 Aligned_cols=299 Identities=18% Similarity=0.117 Sum_probs=184.7
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHhc----CCCC-EEEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAV-THLL----GTGE-EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~~----~~g~-~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
+..+++++++++++|.+ +.+++++|++|+.++ .+++ ++|| +|+++++.|+++...+..+ +..|.+++.++.
T Consensus 63 ~~~~~l~~~la~~~~~~~~~v~~~~g~t~al~~~~~~l~~~~~~~gd~~Vl~~~~~~~~~~~~~~~~-~~~g~~~~~v~~ 141 (400)
T 3vax_A 63 RGVERAREYLASTVSAEPDELIFTSGATESNNIALLGLAPYGERTGRRHIITSAIEHKAVLEPLEHL-AGRGFEVDFLTP 141 (400)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEESCHHHHHHHHHHTTHHHHHHHTCCEEEEETTSCHHHHHHHHHH-HTTTCEEEEECC
T ss_pred HHHHHHHHHHHHHcCCCCCcEEEeCCHHHHHHHHHHHHHHhhccCCCCEEEECccccHhHHHHHHHH-HhcCCeEEEEcc
Confidence 46889999999999987 466667778999754 4455 7999 9999999999987666443 568999999987
Q ss_pred C-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC-CCCCCccEEEecccc
Q 016612 127 C-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATK 200 (386)
Q Consensus 127 ~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-~~~~~~di~~~S~sK 200 (386)
+ |++++++++++++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+.... .... .|++++|+||
T Consensus 142 ~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~d~~~~s~~K 220 (400)
T 3vax_A 142 GPSGRISVEGVMERLRPDTLLVSLMHVNNETGVIQPVAELAQQLRATPTYLHVDAAQGYGKVPGDLTTP-IDMISISGHK 220 (400)
T ss_dssp CTTCCCCHHHHHTTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSCEEEEECTTTTTTSGGGGGSC-CSEEEEETGG
T ss_pred CCCCCcCHHHHHHhcCCCceEEEEECCCCCceeeCcHHHHHHHHHhcCCEEEEEhhhhcCCCCcChhhc-CcEEEEeHHH
Confidence 5 8999999999999999999999999999999999999999999999999998766432 2233 8999999999
Q ss_pred ccccCCCceEEEEE-EcChhHH---HHHHHhh-------hhcCCCCChhhHHHHHhcCCc----HHHHHHHHHHHHHHHH
Q 016612 201 FIAGHSDVMAGVLA-VKGERLA---KELYFLQ-------NAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIA 265 (386)
Q Consensus 201 ~~~g~~g~~~G~i~-~~~~~~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~ 265 (386)
++ |+.| +|+++ ++++.+. ..+.... .......+......+..+++. +....++..++.+.+.
T Consensus 221 ~~-g~~g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~ 297 (400)
T 3vax_A 221 IG-APKG--VGALVTRRREEMDDERVPLEPIMFGGGQERKLRPGTLPVPLIMGLAEAAKIFEAEHAQWQVAAQDLRSRLL 297 (400)
T ss_dssp GT-SCSS--CEEEEECBCSSSTTCBCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHH
T ss_pred hC-CCCc--eEEEEEecchhccccccccCceecCCCceeeeecCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 65 6666 57777 7762211 0111111 011122333333333333322 2233333444444444
Q ss_pred HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCC
Q 016612 266 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 345 (386)
Q Consensus 266 ~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~ 345 (386)
+.++ .+ ++.+..+.....++++.+.+.+. ..+.+.+.+. .|+.+++|..+.....+
T Consensus 298 ~~L~-~~--------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~-~gi~v~~g~~~~~~~~~------- 353 (400)
T 3vax_A 298 AGLA-ST--------------SFQVNGDQDHVVPHILNLSFEDV-DAEAFLVTLK-DLVAVATGSASTSASFT------- 353 (400)
T ss_dssp HHHT-TT--------------TCEECSCTTSBCTTEEEEECTTC-CHHHHHHHHH-HHHHHTTTTEEEEEEEC-------
T ss_pred HhhC-CC--------------CEEEeCCcccCCCCEEEEEeCCC-CHHHHHHHHh-cCcEEEecccccCCCCC-------
Confidence 4444 22 22222111112346788877643 3667788888 89988888653321111
Q ss_pred CCHHHHHhcCCC----CCeEEEEe-c----cCChHHHHHHHHHHHhc
Q 016612 346 IPVEVRQARGLT----EDLVRISV-G----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 346 ~~~~~~~~~~~~----~~~iRis~-~----~~~~~~~i~~l~~~l~~ 383 (386)
+.......|.. ++++||++ + .++++++++.|++++++
T Consensus 354 -~~~~~~~~g~~~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~~~ 399 (400)
T 3vax_A 354 -PSHVLRAMGLPEEAASKSLRFSWTPGQATDLDVEELARGVAKLKPS 399 (400)
T ss_dssp -CHHHHHTTTCCHHHHTSEEEEEEEEC--------------------
T ss_pred -ccHHHHHcCCCccccCceEEEEccCCCCCHHHHHHHHHHHHHHhcc
Confidence 01111222333 48899999 6 47777777777777653
No 82
>1u08_A Hypothetical aminotransferase YBDL; alpha beta protein; HET: PLP; 2.35A {Escherichia coli} SCOP: c.67.1.1
Probab=99.95 E-value=1.9e-26 Score=215.87 Aligned_cols=292 Identities=15% Similarity=0.138 Sum_probs=190.7
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|... |.+ +++++.+++.+.+|. + +.+++++|++++.+ +..++++||+|++++|.|+++. ..++..
T Consensus 60 ~~~y~~~~g~~~l~~~la~~l~~~~g~~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~ 135 (386)
T 1u08_A 60 ANQYAPMTGVQALREAIAQKTERLYGYQPDADSDITVTAGATEALYAAITALVRNGDEVICFDPSYDSYA----PAIALS 135 (386)
T ss_dssp CCSCCCTTCCHHHHHHHHHHHHHHHSCCCCTTTTEEEESSHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHT
T ss_pred ccCCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCCEEEcCChHHHHHHHHHHhCCCCCEEEEeCCCchhHH----HHHHHc
Confidence 3467665 654 788888888777663 3 56666677799874 5557899999999999999886 445567
Q ss_pred CcEEEEeCC------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 118 GVVVKRVNT------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 118 g~~~~~v~~------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
|.+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+...+.
T Consensus 136 g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~~~ 215 (386)
T 1u08_A 136 GGIVKRMALQPPHFRVDWQEFAALLSERTRLVILNTPHNPSATVWQQADFAALWQAIAGHEIFVISDEVYEHINFSQQGH 215 (386)
T ss_dssp TCEEEEEECCTTTCCCCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHTTSCCEEEEECTTTTCBCCSSCC
T ss_pred CCEEEEeecCcccCcCCHHHHHHhhcccCEEEEEeCCCCCCCccCCHHHHHHHHHHHHHcCcEEEEEccccccccCCCCC
Confidence 888888875 3799999999889999999999999999985 789999999999999999999753221
Q ss_pred -CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHHHH
Q 016612 185 -RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALRVE 255 (386)
Q Consensus 185 -~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 255 (386)
... ..+.|+++.|+||++ +++|+|+|+++++ +.+.+.+...........+...+.++...++. +....+
T Consensus 216 ~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~ 293 (386)
T 1u08_A 216 ASVLAHPQLRERAVAVSSFGKTY-HMTGWKVGYCVAP-APISAEIRKVHQYLTFSVNTPAQLALADMLRAEPEHYLALPD 293 (386)
T ss_dssp CCGGGSHHHHTTEEEEEEHHHHT-TCGGGCCEEEECC-HHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHCTHHHHTHHH
T ss_pred cChhcccCccCcEEEEecchhhc-CCcccceEEEEcC-HHHHHHHHHHHHhhccCCChHHHHHHHHHHhCCcHHHHHHHH
Confidence 111 236799999999999 4567899999987 55666565544333334444444444333321 222223
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcC-cceeccCCCCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTK-YFSITVSFGSVK 332 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~-~~gi~~~~G~~~ 332 (386)
...++.+.+.+.+++. ++.+. . ...+.++++.++.. ....++.+.+. ..|+.+.+|..+
T Consensus 294 ~~~~~~~~l~~~L~~~---------------g~~~~--~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~f 355 (386)
T 1u08_A 294 FYRQKRDILVNALNES---------------RLEIL--P-CEGTYFLLVDYSAVSTLDDVEFCQWLTQEHGVAAIPLSVF 355 (386)
T ss_dssp HHHHHHHHHHHHTTSS---------------SCEEC--C-CCBSSEEEEECTTTCCSCHHHHHHHHHHHSCEECEEGGGG
T ss_pred HHHHHHHHHHHHHHHC---------------CCeec--C-CCceEEEEEecCCCCCCCHHHHHHHHHHhCCEEEeCchHh
Confidence 3333444444443322 11111 1 11256778877542 23456666554 568877766532
Q ss_pred ccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 333 SLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
.. . ...++++|||++. .++.++.+.+.|+
T Consensus 356 ~~---~----------------~~~~~~iRis~~~--~~~~i~~~~~~l~ 384 (386)
T 1u08_A 356 CA---D----------------PFPHKLIRLCFAK--KESTLLAAAERLR 384 (386)
T ss_dssp CS---S----------------CCCSCEEEEECCS--CHHHHHHHHHHHT
T ss_pred CC---C----------------CCCCCEEEEEEcC--CHHHHHHHHHHHh
Confidence 10 0 0135789999984 3444444444443
No 83
>3ihj_A Alanine aminotransferase 2; helix, structural genomics, structural genomics consortium, pyridoxal phosphate; HET: PLP; 2.30A {Homo sapiens}
Probab=99.95 E-value=4.1e-26 Score=220.08 Aligned_cols=295 Identities=16% Similarity=0.128 Sum_probs=194.3
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcC-C----CceEEeCcHHHHHHHH-HHhcCCCC----EEEecCCCCCcHHHHHhhh
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDK-A----DRALCFTSGMAALAAV-THLLGTGE----EIVAGDDLYGGTDRLLSRV 113 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g-~----~~~i~~~~gt~al~~~-~~~~~~g~----~Vlv~~~~~~~~~~~~~~~ 113 (386)
...|+.. |.+ +++++.+++.+..| . +++++++++++++..+ ..++++|| .|+++.|.|+.+. ..
T Consensus 122 ~~~Y~~~~G~~~lr~~ia~~~~~~~gG~~~~~~~i~~t~G~~~ai~~~~~~l~~~gd~~~d~Vlv~~p~y~~~~----~~ 197 (498)
T 3ihj_A 122 LGSYSASQGVNCIREDVAAYITRRDGGVPADPDNIYLTTGASDGISTILKILVSGGGKSRTGVMIPIPQYPLYS----AV 197 (498)
T ss_dssp ------CCSCHHHHHHHHHHHHHHTTTCCCCGGGEEEESSHHHHHHHHHHHHCCCCGGGSEEEEEEESCCTHHH----HH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHhcCCCCCCcccEEEcCCHHHHHHHHHHHHcCCCCCCCCEEEEeCCCchhHH----HH
Confidence 4568877 875 89999999998875 3 3566666667998754 55778875 9999999999886 44
Q ss_pred cccCCcEEEEeCCC-------CHHHHHhhhCC-----CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCC
Q 016612 114 TPKTGVVVKRVNTC-------DLDEVASAIGP-----WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 114 ~~~~g~~~~~v~~~-------d~~~l~~~~~~-----~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~ 178 (386)
++..|.+++.++.+ |+++|++.+++ ++++|++++|+||||.+++ +++|+++|+++|++||+||+|
T Consensus 198 ~~~~g~~~v~~~~~~~~~~~~d~~~le~~l~~~~~~~~~k~i~l~np~NPTG~v~s~~~l~~i~~la~~~~~~li~De~y 277 (498)
T 3ihj_A 198 ISELDAIQVNYYLDEENCWALNVNELRRAVQEAKDHCDPKVLCIINPGNPTGQVQSRKCIEDVIHFAWEEKLFLLADEVY 277 (498)
T ss_dssp HHHTTCEEEEEECBGGGTTBCCHHHHHHHHHHHTTTSEEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTT
T ss_pred HHHcCCEEEEeeccccccCCCCHHHHHHHHHhhhccCCCeEEEEECCCCCCCCcCCHHHHHHHHHHHHHcCcEEEEEcCc
Confidence 55678888888764 88999998875 6899999999999999986 778999999999999999999
Q ss_pred CCCCccCC---CC--------------CCccEEEeccccccccCCCceEEEEEE--cChhHHHHHHHhhhhcCCCCChhh
Q 016612 179 MSPVLSRP---LE--------------LGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNAEGSGLAPFD 239 (386)
Q Consensus 179 ~~~~~~~~---~~--------------~~~di~~~S~sK~~~g~~g~~~G~i~~--~~~~~~~~~~~~~~~~~~~~~~~~ 239 (386)
+...+... .. ....+++.|+||.+.|.+|+|+||++. .++.+.+.+....... ...+...
T Consensus 278 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~S~SK~~~G~~G~R~G~~~~~~~~~~l~~~l~~~~~~~-~~~~~~~ 356 (498)
T 3ihj_A 278 QDNVYSPDCRFHSFKKVLYEMGPEYSSNVELASFHSTSKGYMGECGYRGGYMEVINLHPEIKGQLVKLLSVR-LCPPVSG 356 (498)
T ss_dssp TTCBCCTTCCCCCHHHHHHHTCHHHHTTCCEEEEEESSSSTTCCSSSCCEEEEEESCCHHHHHHHHHHHHHS-CCCCHHH
T ss_pred cccccCCCCCcCCHHHHHHHhcccccCceeEEEEeccccccccCcccceEEEEEecCCHHHHHHHHHHHhcc-CCCCHHH
Confidence 86544211 00 012478899999997777899999984 4566766665554432 3334444
Q ss_pred HHHHHhcCCc-------H-------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-
Q 016612 240 CWICLRGVKT-------M-------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF- 304 (386)
Q Consensus 240 ~~~~~~~~~~-------~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~- 304 (386)
+.++...+.. + ....+.+.++.+.+.+.|++.+ ++.+. ...++++.|
T Consensus 357 q~a~~~~l~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~l~~~L~~~~--------------g~~~~----~p~gg~~~~~ 418 (498)
T 3ihj_A 357 QAAMDIVVNPPVAGEESFEQFSREKESVLGNLAKKAKLTEDLFNQVP--------------GIHCN----PLQGAMYAFP 418 (498)
T ss_dssp HHHHHHHTCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTST--------------TEECC----CCCBSSEECC
T ss_pred HHHHHHHhcCCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CcEec----CCCeEEEEEE
Confidence 5444444421 1 2223445566666666666542 21111 223455555
Q ss_pred EeCCHH-----------hHHH--HHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CC
Q 016612 305 LTGSLA-----------LSKH--VVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--ED 369 (386)
Q Consensus 305 ~~~~~~-----------~~~~--l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~ 369 (386)
.++.+. ..+. +.+.+...|+.+.+|..+.. + .+++++|++++. ++
T Consensus 419 ~l~~p~~~~~~~~~~g~~~~~~~~~~ll~~~gI~v~pG~~f~~---~-----------------~~~~~~Ris~~~~~e~ 478 (498)
T 3ihj_A 419 RIFIPAKAVEAAQAHQMAPDMFYCMKLLEETGICVVPGSGFGQ---R-----------------EGTYHFRMTILPPVEK 478 (498)
T ss_dssp EECCCHHHHHHHHHTTSCHHHHHHHHHHHHHCBCCEEGGGTCC---C-----------------TTCCBEEEECCSCHHH
T ss_pred eccCchhhhHHHHhcCCCcHHHHHHHHHHHCCEEEEeCcccCC---C-----------------CCCCEEEEEeCCCHHH
Confidence 343211 0122 34445556887777765321 0 135679999963 67
Q ss_pred hHHHHHHHHHHHhc
Q 016612 370 VNDLISDLDKALRT 383 (386)
Q Consensus 370 ~~~~i~~l~~~l~~ 383 (386)
+++.+++|.+++++
T Consensus 479 l~~~i~~L~~~~~~ 492 (498)
T 3ihj_A 479 LKTVLQKVKDFHIN 492 (498)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 77888888887764
No 84
>3ppl_A Aspartate aminotransferase; dimer, PLP-dependent transferase-like fold structural genomics, joint center for structural genomics; HET: MSE PLP UNL; 1.25A {Corynebacterium glutamicum}
Probab=99.95 E-value=6.1e-27 Score=222.19 Aligned_cols=296 Identities=15% Similarity=0.087 Sum_probs=195.5
Q ss_pred CccccCC-CCchHHHHHHHHHhhcCCC-ceE-EeCcHHHHH--H-HHHHhcC--C----------CCEEEecCCCCCcHH
Q 016612 46 PYDYTRS-GNPTRDALESLLAKLDKAD-RAL-CFTSGMAAL--A-AVTHLLG--T----------GEEIVAGDDLYGGTD 107 (386)
Q Consensus 46 ~~~y~~~-g~~~~~~l~~~l~~~~g~~-~~i-~~~~gt~al--~-~~~~~~~--~----------g~~Vlv~~~~~~~~~ 107 (386)
...|... |.+ ++++.++++++.+ +.| +++++++++ . ++..+++ | ||+|++++|+|+++.
T Consensus 71 ~~~Y~~~~g~~---~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~~gd~V~v~~p~y~~~~ 147 (427)
T 3ppl_A 71 VRNYGGLDGIV---DIRQIWADLLGVPVEQVLAGDASSLNIMFDVISWSYIFGNNDSVQPWSKEETVKWICPVPGYDRHF 147 (427)
T ss_dssp TTSSCCSSCCH---HHHHHHHHHHTSCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH
T ss_pred hcCCCCCCCcH---HHHHHHHHHhCCCcceEEEeCCcHHHHHHHHHHHHHhccCCcccccccCCCCCEEEEcCCCcHHHH
Confidence 4566654 544 5556666666665 444 445556888 3 4455666 6 899999999999886
Q ss_pred HHHhhhcccCCcEEEEeCCC----CHHHHHhhhC-CCceEEEEe-CCCCCCcccccHH---HHHHHH-HHcCCEEEEeCC
Q 016612 108 RLLSRVTPKTGVVVKRVNTC----DLDEVASAIG-PWTKLVWVE-SPTNPRQQICDIR---KIAEMA-HAHGALLLVDNS 177 (386)
Q Consensus 108 ~~~~~~~~~~g~~~~~v~~~----d~~~l~~~~~-~~~~~v~~~-~~~nptG~~~~l~---~i~~la-~~~~~~li~D~a 177 (386)
..++..|.+++.++.+ |+++++++++ +++++|+++ +++||||.+.+.+ +|.++| +++|++||+||+
T Consensus 148 ----~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~p~~~NPtG~~~~~~~~~~l~~~a~~~~~~~ii~De~ 223 (427)
T 3ppl_A 148 ----SITERFGFEMISVPMNEDGPDMDAVEELVKNPQVKGMWVVPVFSNPTGFTVTEDVAKRLSAMETAAPDFRVVWDNA 223 (427)
T ss_dssp ----HHHHHTTCEEEEEEEETTEECHHHHHHHTTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECT
T ss_pred ----HHHHHcCCEEEEeCCCCCCCCHHHHHHHHhcCCCeEEEECCCCCCCCCccCCHHHHHHHHHHHhhcCCCEEEEECC
Confidence 4556788898888764 8999999995 789999876 8999999999865 888888 999999999999
Q ss_pred CCCCCcc-------CC-------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHH
Q 016612 178 IMSPVLS-------RP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (386)
Q Consensus 178 ~~~~~~~-------~~-------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (386)
|+...+. +. ...+.+++++|+||++ ++ |+|+||++++ +.+.+.+...........+...+.++
T Consensus 224 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~-G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~q~~~ 300 (427)
T 3ppl_A 224 YAVHTLTDEFPEVIDIVGLGEAAGNPNRFWAFTSTSKIT-LA-GAGVSFFLTS-AENRKWYTGHAGIRGIGPNKVNQLAH 300 (427)
T ss_dssp TTTCBSSSCCCCCCCHHHHHHHTTCTTSEEEEEESTTTS-CT-TSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred CcccccCCCCCCccchhhhhhccCCCCcEEEEechhhcc-Cc-CccEEEEEcC-HHHHHHHHHHhhcccCCCCHHHHHHH
Confidence 8753221 11 1346789999999993 44 7899999987 55666666665555566666666666
Q ss_pred HhcCCcH-------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHH
Q 016612 244 LRGVKTM-------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 316 (386)
Q Consensus 244 ~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 316 (386)
...+... ....+.+.++.+.+.+.+.+. ++.+++..+. . ...+.++++.++.. ....+.
T Consensus 301 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------l~~~~~~~~~--~-p~~g~~~~~~~~~~-~~~~~~ 366 (427)
T 3ppl_A 301 ARYFGDAEGVRAVMRKHAASLAPKFNKVLEILDSR----------LAEYGVAQWT--V-PAGGYFISLDVVPG-TASRVA 366 (427)
T ss_dssp HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HGGGTCCEEC--C-CSBSSCEEEECSTT-CHHHHH
T ss_pred HHHHhChhhHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCCCCceEEe--C-CCccEEEEEECCcc-hHHHHH
Confidence 5555441 122223333444444444431 0000011110 1 12367788888654 366777
Q ss_pred hhcCcceeccCCCC-ccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 317 ETTKYFSITVSFGS-VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 317 ~~l~~~gi~~~~G~-~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
+.+...|+.+.+|+ ++..- ....++++|||++. +++++.++.|.+++++
T Consensus 367 ~~l~~~gv~v~~~g~~~~~~------------------~~~~~~~~Ris~~~~~~~~i~~~~~~l~~~l~~ 419 (427)
T 3ppl_A 367 ELAKEAGIALTGAGSSYPLR------------------QDPENKNLRLAPSLPPVEELEVAMDGVATCVLL 419 (427)
T ss_dssp HHHHHTTEECCCTTTTSGGG------------------CCTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCCEEecCcCcCCCC------------------CCCCCCeEEEECCCCCHHHHHHHHHHHHHHHHH
Confidence 77878899888844 32100 01136789999975 6677888888887764
No 85
>3g0t_A Putative aminotransferase; NP_905498.1, putative aspartate aminotransferase, structural genomics, joint center for structural genomics; HET: MSE LLP PE4; 1.75A {Porphyromonas gingivalis}
Probab=99.95 E-value=1.6e-26 Score=219.96 Aligned_cols=298 Identities=14% Similarity=0.100 Sum_probs=201.4
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHHH-HHhc--CCCC--EEEecCCCCCcHHHHHhhhcc
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAAV-THLL--GTGE--EIVAGDDLYGGTDRLLSRVTP 115 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~~-~~~~--~~g~--~Vlv~~~~~~~~~~~~~~~~~ 115 (386)
..|... |.+ +++++.+++.+.+|. ++.+++++|++++.++ ..++ ++|| +|++++|+|+++.. .++
T Consensus 76 ~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~i~~t~g~t~al~~~~~~l~~~~~gd~~~Vl~~~p~~~~~~~----~~~ 151 (437)
T 3g0t_A 76 SIYPNLDGLPELKQEASRFAKLFVNIDIPARACVPTVGSMQGCFVSFLVANRTHKNREYGTLFIDPGFNLNKL----QCR 151 (437)
T ss_dssp GSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHTTSCTTCSCCEEEEESCCHHHHH----HHH
T ss_pred cCCCCCCChHHHHHHHHHHHHHhhCCCCCcccEEEeCCHHHHHHHHHHHHhcCCCCCccEEEEeCCCcHhHHH----HHH
Confidence 556665 554 677777777766553 3566666667999754 5566 8999 99999999998864 445
Q ss_pred cCCcEEEEeCCC------CHHHHHhhh-CCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-
Q 016612 116 KTGVVVKRVNTC------DLDEVASAI-GPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS- 184 (386)
Q Consensus 116 ~~g~~~~~v~~~------d~~~l~~~~-~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~- 184 (386)
..|.+++.++.+ |++++++++ ++++++|++++|+||||.+.+ +++|+++|+++|+++|+|++|+...+.
T Consensus 152 ~~g~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~v~l~~p~nptG~~~~~~~l~~i~~~a~~~~~~li~De~~~~~~~~~ 231 (437)
T 3g0t_A 152 ILGQKFESFDLFEYRGEKLREKLESYLQTGQFCSIIYSNPNNPTWQCMTDEELRIIGELATKHDVIVIEDLAYFGMDFRK 231 (437)
T ss_dssp HHTCCCEEEEGGGGCTTHHHHHHHHHHTTTCCCEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCCTTS
T ss_pred HcCCEEEEEeecCCCCccCHHHHHHHHhcCCceEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchhhcccCC
Confidence 677888887753 789999999 688999999999999999986 778999999999999999999743221
Q ss_pred ------------CCC-CCCccEEEeccccccccCCCceEEEEEEcChhHHH-H-----------------HHHhhhhcCC
Q 016612 185 ------------RPL-ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK-E-----------------LYFLQNAEGS 233 (386)
Q Consensus 185 ------------~~~-~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~-~-----------------~~~~~~~~~~ 233 (386)
... ..+.+++++|+||++ +++|+|+|++++++ .+.+ . +.........
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (437)
T 3g0t_A 232 DYSHPGEPLYQPSVANYTDNYILALSSSKAF-SYAGQRIGVLMISG-KLYEREYPDLEESFGRLRFGEALSSSALYALSS 309 (437)
T ss_dssp CCCSTTSSCCCCCGGGTCSCEEEEEESTTTT-SCGGGCCEEEEECH-HHHHCBCGGGHHHHSCSBHHHHHHTTHHHHHHS
T ss_pred CcCcccccchhhccCCCCCcEEEEEcCccCC-CCccceeEEEEECH-HHhhhhhhcccccccccchhHHHHHHHHhhhcC
Confidence 111 246779999999999 55678999999974 4544 3 3333333334
Q ss_pred CCChhhHHHHHhcCCc-------HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe
Q 016612 234 GLAPFDCWICLRGVKT-------MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 306 (386)
Q Consensus 234 ~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 306 (386)
..+...+.++...++. +....+.+.++.+.+.+.+++.. + ....+. . ...+...+.++++.+
T Consensus 310 ~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g-~-~~~~~~-------~--~~~~~~~~~~~~~~~ 378 (437)
T 3g0t_A 310 GATHSAQWGMAAMLKACNDGEYNFRDSVIEYGRKARIMKKMFLDNG-F-NIVYDK-------D--GNEPLADGFYFTVGY 378 (437)
T ss_dssp SSCHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHTTT-E-EESSCE-------E--TTEECCSSSEEEEEE
T ss_pred CCCHHHHHHHHHHHhCcHhHHHHHHHHHHHHHHHHHHHHHHHHHcC-C-EEeccc-------c--CCCCCceeEEEEEec
Confidence 4555555555443322 44555566666777777776541 1 000000 0 000112466778787
Q ss_pred CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 307 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 307 ~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
++ .....+.+.+...|+.+.+|..+. ...++++|||++. ++++++++.|++++++
T Consensus 379 ~~-~~~~~l~~~L~~~gi~v~~~~~~~---------------------~~~~~~iRis~~~~~~e~i~~~~~~l~~~~~~ 436 (437)
T 3g0t_A 379 KG-MDSSKLIEKFVRYGMCAITLKTTG---------------------SKRNEAMRICTSLLPESQFPDLEKRLQMLNAE 436 (437)
T ss_dssp TT-CCHHHHHHHHHHTTEECEESTTTT---------------------CCCTTCEEEECSSSCGGGHHHHHHHHHHHHHH
T ss_pred CC-CCHHHHHHHHHHcCeEEeeccccC---------------------CCCCCEEEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 62 235667777777788877665421 0023679999973 7888888888887764
No 86
>3cai_A Possible aminotransferase; RV3778C; 1.80A {Mycobacterium tuberculosis}
Probab=99.95 E-value=7.1e-27 Score=220.19 Aligned_cols=293 Identities=19% Similarity=0.109 Sum_probs=195.1
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHHH-Hh---cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAAVT-HL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~~-~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
+...++++.+++++|.+ +.+++++|++++.++. ++ +++||+|++++++|+++...+....+..|.+++.++.+
T Consensus 69 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~~~~~l~~~~~~gd~vi~~~~~~~~~~~~~~~~~~~~g~~v~~v~~~~ 148 (406)
T 3cai_A 69 AVLDAAREAVADLVNADPGGVVLGADRAVLLSLLAEASSSRAGLGYEVIVSRLDDEANIAPWLRAAHRYGAKVKWAEVDI 148 (406)
T ss_dssp HHHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHTGGGGBTTCEEEEETTSCGGGTHHHHHHHHHHBCEEEEECCCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeCChHHHHHHHHHHHhhccCCCCEEEEcCCccHHHHHHHHHHHHhcCCeEEEEecCc
Confidence 46888999999999986 4555666678887554 45 68999999999999988666555455578899988865
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.+++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... +....+.|++++|+||+
T Consensus 149 ~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~ 228 (406)
T 3cai_A 149 ETGELPTWQWESLISKSTRLVAVNSASGTLGGVTDLRAMTKLVHDVGALVVVDHSAAAPYRLLDIRETDADVVTVNAHAW 228 (406)
T ss_dssp TTCCCCGGGHHHHCCTTEEEEEEESBCTTTCBBCCCHHHHHHHHHTTCEEEEECTTTTTTCCCCHHHHCCSEEEEEGGGG
T ss_pred ccCCcCHHHHHHHhCCCceEEEEeCCcCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCCCchhcCCCEEEeehhhh
Confidence 899999999989999999999999999999999999999999999999999876552 22234789999999998
Q ss_pred cccCCCceEE-EEEEcChhHHHHHHHhhh---------hcCCCCChhhHHHHHhcCCc-------------------HHH
Q 016612 202 IAGHSDVMAG-VLAVKGERLAKELYFLQN---------AEGSGLAPFDCWICLRGVKT-------------------MAL 252 (386)
Q Consensus 202 ~~g~~g~~~G-~i~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~-------------------~~~ 252 (386)
+ |+. +| ++++++ .+.+.+..... ......+......+..+++. +..
T Consensus 229 ~-g~~---~G~~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~~~~~ 303 (406)
T 3cai_A 229 G-GPP---IGAMVFRDP-SVMNSFGSVSTNPYATGPARLEIGVHQFGLLAGVVASIEYLAALDESARGSRRERLAVSMQS 303 (406)
T ss_dssp T-SCS---CEEEEESCH-HHHHTSCCCCSCTTCCGGGGGCCSCCCHHHHHHHHHHHHHHHTSSTTCCSSHHHHHHHHHHH
T ss_pred c-CCC---cCeEEEEeh-HHHhhcCCcccCCCCCccccccCCCccHHHHHHHHHHHHHHHHhccccccchhhhhhhhHHH
Confidence 7 543 56 988864 45443322211 00112233222222111111 233
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcc
Q 016612 253 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVK 332 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~ 332 (386)
..++..++.+.+.+.|++.+. +.++.+ ....++++++.+++. ...++.+.+...|+.++.|...
T Consensus 304 ~~~~~~~~~~~l~~~L~~~~~--------------~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~L~~~gi~v~~g~~~ 367 (406)
T 3cai_A 304 ADAYLNRVFDYLMVSLRSLPL--------------VMLIGR-PEAQIPVVSFAVHKV-PADRVVQRLADNGILAIANTGS 367 (406)
T ss_dssp HHHHHHHHHHHHHHHHHTCTT--------------EEECCC-CSSBCSEEEEEETTB-CHHHHHHHHHHTTEECEECCSC
T ss_pred HHHHHHHHHHHHHHHHhcCCC--------------eEEcCC-ccccCCEEEEEECCc-CHHHHHHHHHHCCcEEecCChH
Confidence 334444555555566654332 111111 012356788887642 2556667776678887766511
Q ss_pred ccccccccccCCCCCHHHHHhcCC--CCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 333 SLISMPCFMSHASIPVEVRQARGL--TEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 333 ~~~~~p~~~~~~~~~~~~~~~~~~--~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
.. ...++. .++++|+|++....++.++.+.++|+++
T Consensus 368 ~~----------------~~~~g~~~~~~~iRis~~~~~t~e~i~~~~~~l~~~ 405 (406)
T 3cai_A 368 RV----------------LDVLGVNDVGGAVTVGLAHYSTMAEVDQLVRALASL 405 (406)
T ss_dssp HH----------------HHHHTTTTTTCCEEEECCTTCCHHHHHHHHHHHHTC
T ss_pred HH----------------HHHcCCCCCCCeEEEEeecCCCHHHHHHHHHHHHHh
Confidence 10 001122 2478999999766677777777777653
No 87
>1vp4_A Aminotransferase, putative; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE PLP; 1.82A {Thermotoga maritima} SCOP: c.67.1.1
Probab=99.95 E-value=1.1e-26 Score=220.41 Aligned_cols=297 Identities=14% Similarity=0.140 Sum_probs=194.6
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcC---CC--ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDK---AD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g---~~--~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
..|... |.+ +++++.+++.+.+| .+ +.+++++|++++. ++.+++++||+|++++|+|+++. ..++..|
T Consensus 79 ~~y~~~~g~~~lr~~la~~l~~~~g~~~~~~~~v~~t~G~~~al~~~~~~l~~~gd~Vl~~~p~y~~~~----~~~~~~g 154 (425)
T 1vp4_A 79 LQYSTTEGDPVLKQQILKLLERMYGITGLDEDNLIFTVGSQQALDLIGKLFLDDESYCVLDDPAYLGAI----NAFRQYL 154 (425)
T ss_dssp TSCCCTTCCHHHHHHHHHHHHHHHCCCSCCGGGEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTT
T ss_pred cCCCCCCCCHHHHHHHHHHHHhccCCCCCCcccEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcC
Confidence 456655 554 67777777766657 33 4445555568887 45567899999999999999886 4445678
Q ss_pred cEEEEeCCC----CHHHHHhhhCC--------CceEE-EEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 119 VVVKRVNTC----DLDEVASAIGP--------WTKLV-WVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 119 ~~~~~v~~~----d~~~l~~~~~~--------~~~~v-~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
.+++.++.+ |++++++.+++ ++++| ++++|+||||.+.+ +++|.++|+++|+++|+||+|+...
T Consensus 155 ~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~ 234 (425)
T 1vp4_A 155 ANFVVVPLEDDGMDLNVLERKLSEFDKNGKIKQVKFIYVVSNFHNPAGVTTSLEKRKALVEIAEKYDLFIVEDDPYGALR 234 (425)
T ss_dssp CEEEEEEEETTEECHHHHHHHHHHHHHTTCGGGEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECSSTTCB
T ss_pred CEEEEeccCCCCCCHHHHHHHHHhhhhcccCCCceEEEECCCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEECCCcccc
Confidence 888888763 88999988865 78888 47899999999986 6789999999999999999997643
Q ss_pred cc-----CC---CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----
Q 016612 183 LS-----RP---LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----- 249 (386)
Q Consensus 183 ~~-----~~---~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 249 (386)
+. .. ...+.++++.|+||+++ +|+|+|+++++ +++.+.+.........+.+...++++...++.
T Consensus 235 ~~g~~~~~~~~~~~~~~~i~~~s~sK~~~--~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~ 311 (425)
T 1vp4_A 235 YEGETVDPIFKIGGPERVVLLNTFSKVLA--PGLRIGMVAGS-KEFIRKIVQAKQSADLCSPAITHRLAARYLERYDLLE 311 (425)
T ss_dssp CSSCCCCCHHHHHCTTTEEEEEESTTTTC--GGGCEEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHSCHHH
T ss_pred CCCCCCcCHHHhCCCCCEEEEeccccccc--cccceEEEeeC-HHHHHHHHHHhhhhcCCCCHHHHHHHHHHHhcCCHHH
Confidence 21 11 11256899999999995 58999999987 55666555444333233455555555443322
Q ss_pred -HHHHHHHHHHHHHHHHHHHhhC-CCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccC
Q 016612 250 -MALRVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 327 (386)
Q Consensus 250 -~~~~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~ 327 (386)
+....+.+.++.+.+.+.+++. +. .+++.+. . +..+.++++.++......++.+.+...|+.+.
T Consensus 312 ~~~~~~~~~~~~~~~l~~~L~~~~~~-----------~~g~~~~--~-~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~ 377 (425)
T 1vp4_A 312 QLKPTIELYRRKRTVMLNALEEYFSD-----------IPGVKWV--K-SEGGLFIWLTLPEGFDTWEMFEYAKRKKVFYV 377 (425)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHSTT-----------STTCEEC--C-CSBSSEEEEECCTTCCTTTTHHHHHHHTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCC-----------CCceEEe--c-CCccEEEEEEcCCCCCHHHHHHHHHHCCCEEE
Confidence 1223334445556666666542 10 0011111 0 12356788887532223445555555577777
Q ss_pred CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 328 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
+|..+... +..++++|||++. ++++++++.|++++++
T Consensus 378 ~g~~f~~~-------------------~~~~~~iRis~~~~~~e~i~~~l~~l~~~l~~ 417 (425)
T 1vp4_A 378 PGRVFKVY-------------------DEPSPSMRLSFCLPPDEKIVEGIKRLREVVLE 417 (425)
T ss_dssp EGGGGCTT-------------------CCCCSEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred CchhhcCC-------------------CCCCCeEEEEeCCCCHHHHHHHHHHHHHHHHH
Confidence 66542100 1135789999974 6788888888887764
No 88
>2o0r_A RV0858C (N-succinyldiaminopimelate aminotransfera; PLP-binding enzyme, lysine biosynthesis, aminotransferase, S genomics; HET: LLP; 2.00A {Mycobacterium tuberculosis}
Probab=99.95 E-value=2.8e-26 Score=216.51 Aligned_cols=303 Identities=17% Similarity=0.135 Sum_probs=193.5
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcCC----C-ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDKA----D-RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g~----~-~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
...|... |.+ +++++.+++.+.+|. + +.+++++|++++.+ +..++++||+|++++|+|+++. ..++..
T Consensus 55 ~~~y~~~~g~~~l~~~la~~~~~~~g~~~~~~~~v~~t~g~~~al~~~~~~~~~~gd~Vl~~~~~y~~~~----~~~~~~ 130 (411)
T 2o0r_A 55 VNQYPPGPGSAPLRRAIAAQRRRHFGVDYDPETEVLVTVGATEAIAAAVLGLVEPGSEVLLIEPFYDSYS----PVVAMA 130 (411)
T ss_dssp CCSCCCTTCCHHHHHHHHHHHHHHHCCCCCTTTSEEEEEHHHHHHHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHT
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHcCCCCCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEeCCCcHhHH----HHHHHc
Confidence 4467665 554 788888888877663 2 45555666799874 5557899999999999999986 344567
Q ss_pred CcEEEEeCC--------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc--
Q 016612 118 GVVVKRVNT--------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-- 184 (386)
Q Consensus 118 g~~~~~v~~--------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-- 184 (386)
|.+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.+.+.
T Consensus 131 g~~~~~v~~~~~~~~~~~d~~~l~~~l~~~~~~v~l~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~g~ 210 (411)
T 2o0r_A 131 GAHRVTVPLVPDGRGFALDADALRRAVTPRTRALIINSPHNPTGAVLSATELAAIAEIAVAANLVVITDEVYEHLVFDHA 210 (411)
T ss_dssp TCEEEEEECEEETTEEECCHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTTTCBCTTC
T ss_pred CCEEEEeeccccccCCCCCHHHHHHhhccCceEEEEeCCCCCCCCCCCHHHHHHHHHHHHHcCCEEEEEccccccccCCC
Confidence 888888775 3899999999889999999999999999986 589999999999999999999754321
Q ss_pred ---CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----HHHH
Q 016612 185 ---RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT----MALR 253 (386)
Q Consensus 185 ---~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 253 (386)
... ..+.|+++.|+||++ |++|+|+|+++++ +++.+.+...........+...+.++...++. +...
T Consensus 211 ~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 288 (411)
T 2o0r_A 211 RHLPLAGFDGMAERTITISSAAKMF-NCTGWKIGWACGP-AELIAGVRAAKQYLSYVGGAPFQPAVALALDTEDAWVAAL 288 (411)
T ss_dssp CCCCGGGSTTTGGGEEEEEEHHHHT-TCTTTCEEEEECC-HHHHHHHHHHHHHHTSCCCTTHHHHHHHHHHHCHHHHHHH
T ss_pred CCcChhhccCCCCCEEEEeechhhc-CCccceEEEEeeC-HHHHHHHHHHHhhccCCCChHHHHHHHHHHhCChHHHHHH
Confidence 111 136799999999998 4567999999986 55666555444332223333333333333321 2223
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcC-cceeccCCCC
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTK-YFSITVSFGS 330 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~-~~gi~~~~G~ 330 (386)
.+...++.+.+.+.+++.. + .+. . ...+.++++.++.. ....++.+.+. ..|+.+.+|.
T Consensus 289 ~~~~~~~~~~l~~~L~~~g---------~------~~~--~-~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~ 350 (411)
T 2o0r_A 289 RNSLRARRDRLAAGLTEIG---------F------AVH--D-SYGTYFLCADPRPLGYDDSTEFCAALPEKVGVAAIPMS 350 (411)
T ss_dssp HHHHHHHHHHHHHHHHHHT---------C------EEC--C-CCBSSEEEEECGGGTCCCHHHHHHHHHHHHSEECEEGG
T ss_pred HHHHHHHHHHHHHHHHHcC---------C------Eec--C-CCeeEEEEEecCCCCCCCHHHHHHHHHHhCCEEEcChh
Confidence 3344455555555555431 1 111 0 11244677777531 12455666553 5688777665
Q ss_pred cccccc-ccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 331 VKSLIS-MPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 331 ~~~~~~-~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
.+..-. .|. +. .....++++|||++. ++++++++.|++++++
T Consensus 351 ~f~~~~~~~~-~~----------~~~~~~~~iRis~~~~~e~i~~~~~~l~~~~~~ 395 (411)
T 2o0r_A 351 AFCDPAAGQA-SQ----------QADVWNHLVRFTFCKRDDTLDEAIRRLSVLAER 395 (411)
T ss_dssp GGSCCC-------------------CCGGGCEEEECCSCHHHHHHHHHHHGGGGC-
T ss_pred hhCCCccccc-cc----------cccCCCCeEEEEecCCHHHHHHHHHHHHHHHhc
Confidence 421000 000 00 000124679999974 5566667777666544
No 89
>2e7j_A SEP-tRNA:Cys-tRNA synthase; seven-stranded BETE-strand, lyase, structural genomics; HET: PLP; 2.40A {Archaeoglobus fulgidus} SCOP: c.67.1.9 PDB: 2e7i_A*
Probab=99.95 E-value=4.2e-27 Score=218.95 Aligned_cols=287 Identities=16% Similarity=0.157 Sum_probs=195.0
Q ss_pred CchHHHHHHH-HHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC--CC--
Q 016612 54 NPTRDALESL-LAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN--TC-- 127 (386)
Q Consensus 54 ~~~~~~l~~~-l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~--~~-- 127 (386)
.+...++++. +++++|.+..+++++|++|+. ++.+++++||+|++++|+|+++... ++..|.+++.++ .+
T Consensus 52 ~~~~~~l~~~~la~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~ 127 (371)
T 2e7j_A 52 TPPIHDFIHNQLPKFLGCDVARVTNGAREAKFAVMHSLAKKDAWVVMDENCHYSSYVA----AERAGLNIALVPKTDYPD 127 (371)
T ss_dssp -CCHHHHHHTHHHHHTTSSEEEEESSHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH----HHHTTCEEEEECCCCTTT
T ss_pred HHHHHHHHHHHHHHHcCCCEEEEeCChHHHHHHHHHHHhCCCCEEEEccCcchHHHHH----HHHcCCeEEEeecccCCC
Confidence 3578899999 999999884444455579987 4555789999999999999988643 567889999998 54
Q ss_pred ---CHHHHHhhhC-----CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecc
Q 016612 128 ---DLDEVASAIG-----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSA 198 (386)
Q Consensus 128 ---d~~~l~~~~~-----~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~ 198 (386)
|++++++.++ +++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+... +....+.|++++|+
T Consensus 128 ~~~d~~~l~~~l~~~~~~~~~~~v~~~~~~nptG~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~di~~~s~ 207 (371)
T 2e7j_A 128 YAITPENFAQTIEETKKRGEVVLALITYPDGNYGNLPDVKKIAKVCSEYDVPLLVNGAYAIGRMPVSLKEIGADFIVGSG 207 (371)
T ss_dssp CCCCHHHHHHHHHHHTTTSCEEEEEEESSCTTTCCCCCHHHHHHHHHTTTCCEEEECTTTBTTBCCCHHHHTCSEEEEEH
T ss_pred CCcCHHHHHHHHHhhcccCCeEEEEEECCCCCCcccCCHHHHHHHHHHcCCeEEEECccccCCCCCChhhcCCCEEEecC
Confidence 8999999987 78999999999999999999999999999999999999999876653 22334789999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHH-HHHhhh--hc-----CCCCChhhHHHHHhcCCcHH-HHHHHH--HHHHHHHHHH
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKE-LYFLQN--AE-----GSGLAPFDCWICLRGVKTMA-LRVEKQ--QDNAQKIAEF 267 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~-~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~l~~~ 267 (386)
||+++++. ++|+++++++ +.+. +..... .. ....+..+.+.+..+++.+. ...++. .++.+.+.+.
T Consensus 208 sK~~~~~~--~~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~~~ 284 (371)
T 2e7j_A 208 HKSMAASG--PIGVMGMKEE-WAEIVLRRSEKYKNKEVELLGCTARGATIITLMASFPHVRERIKRWDEEVEKARRFAAE 284 (371)
T ss_dssp HHHSSCCS--SCEEEEECTT-TTTTTTCBCSSCTTSBGGGTTCCCCSHHHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHH
T ss_pred CcCCCCCC--CcEEEEEech-hhhhhccccccCcccccccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99987654 6899999865 4333 322222 11 12233333333333333222 223334 4556666666
Q ss_pred HhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCC
Q 016612 268 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 347 (386)
Q Consensus 268 l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~ 347 (386)
|++. .+ .... .....++++++.++ ...++.+.+...|+.+.+ .... .+
T Consensus 285 L~~~-~~-~~~~--------------~~~~~~~~~~~~~~---~~~~~~~~l~~~gi~~~~-~~~~---~~--------- 332 (371)
T 2e7j_A 285 MEKL-GI-KQLG--------------DNPHNHDLMFFHAE---VLYEISKKAKGGRFFLYR-ELKS---RK--------- 332 (371)
T ss_dssp HHHT-TC-EEES--------------SSSCCSSEEEEECH---HHHHHHHHSSSGGGHHHH-HHHH---TT---------
T ss_pred HHHc-Cc-EEec--------------CCCccCceEEEECC---CHHHHHHHHHHCCEEEEe-cccc---cc---------
Confidence 6653 11 1110 00113678888875 467788888888887653 1100 00
Q ss_pred HHHHHhcCCCCCeEE-EEecc-----CChHHHHHHHHHHHhcC
Q 016612 348 VEVRQARGLTEDLVR-ISVGI-----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 348 ~~~~~~~~~~~~~iR-is~~~-----~~~~~~i~~l~~~l~~~ 384 (386)
..+..++++| ++++. ++++++++.|++++++.
T Consensus 333 -----~~g~~~~~iRii~~~~~~~~~~~i~~~~~~l~~~~~~~ 370 (371)
T 2e7j_A 333 -----IHGIKPGLTRYFKLSTYGLSDEEVDYVLNAFKEIIEKY 370 (371)
T ss_dssp -----EECSCTTCCSEEEEECTTCCHHHHHHHHHHHHHHHHHC
T ss_pred -----ccCCCCCceEEEEeeccCCCHHHHHHHHHHHHHHHHhc
Confidence 0022357799 99874 56677777777777654
No 90
>3e2y_A Kynurenine-oxoglutarate transaminase 3; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: GLN PMP; 2.26A {Mus musculus} SCOP: c.67.1.0 PDB: 2zjg_A* 3e2f_A* 3e2z_A*
Probab=99.95 E-value=3.5e-26 Score=215.74 Aligned_cols=252 Identities=18% Similarity=0.189 Sum_probs=170.8
Q ss_pred cceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcCC-----CceEEeCcHHHH
Q 016612 10 STLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDKA-----DRALCFTSGMAA 82 (386)
Q Consensus 10 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~-----~~~i~~~~gt~a 82 (386)
+...++++.+...++ .++.+.++... .+.......|... |.+ +++++.+++.+.+|. ++.+++++|+++
T Consensus 22 ~~~~i~l~~~~~~~~-~~~~v~~a~~~---~~~~~~~~~y~~~~g~~~l~~~la~~~~~~~~~~~~~~~~i~~~~g~~~a 97 (410)
T 3e2y_A 22 DPSVVNLGQGFPDIS-PPSYVKEELSK---AAFIDNMNQYTRGFGHPALVKALSCLYGKIYQRQIDPNEEILVAVGAYGS 97 (410)
T ss_dssp STTSEECSSCCCCSC-CCHHHHHHHHH---HHTCGGGGSCCCTTCCHHHHHHHHHHHHHHHTSCCCTTTSEEEESHHHHH
T ss_pred CCCeEEecCCCCCCC-CCHHHHHHHHH---HHhCccccCCCCCCChHHHHHHHHHHHHHHhCCCCCCCCCEEEeCCcHHH
Confidence 356788885544343 22222222111 1111223467665 654 788888888776553 345566666799
Q ss_pred HH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----------------CHHHHHhhhCCCceEEEE
Q 016612 83 LA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----------------DLDEVASAIGPWTKLVWV 145 (386)
Q Consensus 83 l~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----------------d~~~l~~~~~~~~~~v~~ 145 (386)
+. ++..++++||+|++++|.|+++. ..++..|.+++.++.. |++++++++++++++|++
T Consensus 98 ~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~~~d~~~l~~~~~~~~~~v~~ 173 (410)
T 3e2y_A 98 LFNSIQGLVDPGDEVIIMVPFYDCYE----PMVRMAGAVPVFIPLRSKPTDGMKWTSSDWTFDPRELESKFSSKTKAIIL 173 (410)
T ss_dssp HHHHHHHHCCTTCEEEEEESCCTTHH----HHHHHTTCEEEEEECEECCCCSSCCBGGGEECCHHHHHTTCCTTEEEEEE
T ss_pred HHHHHHHhcCCCCEEEEeCCCchhhH----HHHHHcCCEEEEEeccccccccccccccCCcCCHHHHHhhcCCCceEEEE
Confidence 87 45567899999999999999886 4445678888877653 889999999989999999
Q ss_pred eCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCC----CCCccEEEeccccccccCCCceEEEE
Q 016612 146 ESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPL----ELGADIVMHSATKFIAGHSDVMAGVL 213 (386)
Q Consensus 146 ~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~----~~~~di~~~S~sK~~~g~~g~~~G~i 213 (386)
++|+||||.+. ++++|.++|+++|+++|+|++|+...+. ... ..+.++++.|+||++ |++|+|+|++
T Consensus 174 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-g~~G~r~G~~ 252 (410)
T 3e2y_A 174 NTPHNPLGKVYTRQELQVIADLCVKHDTLCISDEVYEWLVYTGHTHVKIATLPGMWERTITIGSAGKTF-SVTGWKLGWS 252 (410)
T ss_dssp ESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTTTCBCTTCCCCCGGGSTTCGGGEEEEEEHHHHS-SCGGGCCEEE
T ss_pred eCCCCCCCcCcCHHHHHHHHHHHHHcCcEEEEEhhhhhcccCCCCCCCHHHcCCccCeEEEEecchhhc-CCCCceEEEE
Confidence 99999999996 5899999999999999999999743221 111 124569999999999 5557899999
Q ss_pred EEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC-----------CcHHHHHHHHHHHHHHHHHHHhhC
Q 016612 214 AVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV-----------KTMALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~l~~~l~~~ 271 (386)
+++ +++.+.+...........+...+.++...+ ..+....+.+.++.+.+.+.+++.
T Consensus 253 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 320 (410)
T 3e2y_A 253 IGP-AHLIKHLQTVQQNSFYTCATPLQAALAEAFWIDIKRMDDPECYFNSLPKELEVKRDRMVRLLNSV 320 (410)
T ss_dssp ECC-HHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTTTTSTTSHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEC-HHHHHHHHHHHHhhccCCChHHHHHHHHHHHhhhccccchHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 986 456555655554444455555555444332 223444555566666677777654
No 91
>1vjo_A Alanine--glyoxylate aminotransferase; 17130350, ALR1004, STR genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: PLP; 1.70A {Nostoc SP} SCOP: c.67.1.3
Probab=99.95 E-value=1.4e-26 Score=217.30 Aligned_cols=282 Identities=17% Similarity=0.177 Sum_probs=194.6
Q ss_pred chHHHHHHHHHhhcCCC-c--eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCc--HHHHHhhhcccCCcEEEEeCC--
Q 016612 55 PTRDALESLLAKLDKAD-R--ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTGVVVKRVNT-- 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~-~--~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~--~~~~~~~~~~~~g~~~~~v~~-- 126 (386)
++++++++++++++|.+ + .+++++|++|+. ++..++++||+|++++|+|++ +. ..++..|.+++.++.
T Consensus 67 ~~~~~~~~~la~~~g~~~~~~v~~t~g~t~al~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~~~g~~~~~v~~~~ 142 (393)
T 1vjo_A 67 ALMDEIQSLLRYVWQTENPLTIAVSGTGTAAMEATIANAVEPGDVVLIGVAGYFGNRLV----DMAGRYGADVRTISKPW 142 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHHHH----HHHHHTTCEEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCchHHHHHHHHHhccCCCCEEEEEcCChhHHHHH----HHHHHcCCceEEEecCC
Confidence 47899999999999986 4 455566679987 556678999999999999987 43 555678889988885
Q ss_pred ---CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 127 ---CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 127 ---~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
.|++++++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+... +....++|++++|+||+
T Consensus 143 ~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~di~~~s~sK~ 222 (393)
T 1vjo_A 143 GEVFSLEELRTALETHRPAILALVHAETSTGARQPLEGVGELCREFGTLLLVDTVTSLGGVPIFLDAWGVDLAYSCSQKG 222 (393)
T ss_dssp TCCCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEECCSSST
T ss_pred CCCCCHHHHHHHHhhCCceEEEEeccCCCcceeccHHHHHHHHHHcCCEEEEECCccccCcCCcccccCccEEEEcCccc
Confidence 489999999987 8999999999999999999999999999999999999999866432 22234789999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHh----hh---------------hcCC-CCChhhHHHHHhcCCc-----HHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFL----QN---------------AEGS-GLAPFDCWICLRGVKT-----MALRVEK 256 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~----~~---------------~~~~-~~~~~~~~~~~~~~~~-----~~~~~~~ 256 (386)
++++. ++|+++++++ +.+.+... .. .... ..+...+.++..+++. +....++
T Consensus 223 l~~~~--~~G~l~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~al~~~~~~~~~~~~~~ 299 (393)
T 1vjo_A 223 LGCSP--GASPFTMSSR-AIEKLQRRRTKVANWYLDMNLLGKYWGSERVYHHTAPINLYYALREALRLIAQEGLANCWQR 299 (393)
T ss_dssp TCSCS--SCEEEEECHH-HHHHHHTCSSCCSCSTTCHHHHHHHHSTTCCCCSCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred ccCCC--ceEEEEECHH-HHHHHhccCCCCCceecCcHhhhhhhccCCCCCCCCCHHHHHHHHHHHHHHHHccHHHHHHH
Confidence 97765 4799998754 54444211 00 1111 3444444444444432 2234455
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc-eeccCCCCccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLI 335 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~~~~G~~~~~~ 335 (386)
..++.+.+.+.|++. . ++-... .....+.++++.++......++.+.+... |+.+.+|..+.
T Consensus 300 ~~~~~~~l~~~L~~~-g--------~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~~-- 362 (393)
T 1vjo_A 300 HQKNVEYLWERLEDI-G--------LSLHVE------KEYRLPTLTTVCIPDGVDGKAVARRLLNEHNIEVGGGLGEL-- 362 (393)
T ss_dssp HHHHHHHHHHHHHHT-T--------CCBSSC------GGGBCSSEEEEECCTTCCHHHHHHHHHHHHCEECEECCGGG--
T ss_pred HHHHHHHHHHHHHHc-C--------CcccCC------ccccCCcEEEEEcCCCCCHHHHHHHHHhhCCEEEecCcccc--
Confidence 556666666666653 1 111110 00013467788775333466777777766 88877765311
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEe-cc----CChHHHHHHHHHHH
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISV-GI----EDVNDLISDLDKAL 381 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~~----~~~~~~i~~l~~~l 381 (386)
.++++|||+ +. ++++++++.|++++
T Consensus 363 ---------------------~~~~iRis~~~~~~~~~~i~~~~~~l~~~l 392 (393)
T 1vjo_A 363 ---------------------AGKVWRVGLMGFNSRKESVDQLIPALEQVL 392 (393)
T ss_dssp ---------------------TTTEEEEECCGGGCSHHHHHHHHHHHHHHH
T ss_pred ---------------------CCCEEEEeCCccCChHHHHHHHHHHHHHHh
Confidence 256799994 43 34677777777765
No 92
>2huf_A Alanine glyoxylate aminotransferase; alpha and beta protein, PLP-dependent transferase; HET: LLP; 1.75A {Aedes aegypti} PDB: 2hui_A* 2huu_A*
Probab=99.95 E-value=1.1e-26 Score=217.88 Aligned_cols=286 Identities=14% Similarity=0.155 Sum_probs=194.0
Q ss_pred chHHHHHHHHHhhcCCCc--eE-EeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC----
Q 016612 55 PTRDALESLLAKLDKADR--AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~--~i-~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---- 126 (386)
+...++++++++++|.+. .+ ++++|++++. ++..++++||+|++++|+|+++. +...++..|.+++.++.
T Consensus 52 ~~~~~l~~~la~~~g~~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~ 129 (393)
T 2huf_A 52 KIMDDIKEGVRYLFQTNNIATFCLSASGHGGMEATLCNLLEDGDVILIGHTGHWGDR--SADMATRYGADVRVVKSKVGQ 129 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEcCcHHHHHHHHHHHHhCCCCEEEEECCCcchHH--HHHHHHHcCCeeEEEeCCCCC
Confidence 468899999999999862 45 5567779987 45557899999999999998752 23455667889888875
Q ss_pred -CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 127 -CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 127 -~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
.|++++++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... +....++|++++|+||+++
T Consensus 130 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~sK~l~ 209 (393)
T 2huf_A 130 SLSLDEIRDALLIHKPSVLFLTQGDSSTGVLQGLEGVGALCHQHNCLLIVDTVASLGGAPMFMDRWEIDAMYTGSQKVLG 209 (393)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCSEEECCSSSTTC
T ss_pred CCCHHHHHHHHhccCCcEEEEEccCCCccccCCHHHHHHHHHHcCCEEEEEcccccCCCCcchhhcCccEEEECCCcccc
Confidence 389999999987 8999999999999999999999999999999999999998866543 2234578999999999987
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhh----h-h---------c--------C-CCCChhhHHHHHhcCCc-----HHHHHH
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQ----N-A---------E--------G-SGLAPFDCWICLRGVKT-----MALRVE 255 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~----~-~---------~--------~-~~~~~~~~~~~~~~~~~-----~~~~~~ 255 (386)
|+.|+ |+++++ +++.+.+.... . . . . ...+......+..+++. +....+
T Consensus 210 g~~G~--G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 286 (393)
T 2huf_A 210 APPGI--TPVSFS-HRAVERYKRRNTKVKVYYWDMSLVGDYWGCFGRPRIYHHTISSTLLYGLREAIAMACEEGLPALIA 286 (393)
T ss_dssp CCSSC--EEEEEC-HHHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCSCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred cCCCe--EEEEEC-HHHHHHHhhcCCCCceEEEchHHHHhhhccccccCCCCCCCCHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 77774 898887 55555544320 0 0 0 0 12222222222222221 233445
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc-ceeccCCCCcccc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSL 334 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~~~~G~~~~~ 334 (386)
+..++.+.+.+.|++. . +. ++.+.....+.++++.++......++.+.+.. .|+.+++|...
T Consensus 287 ~~~~~~~~l~~~L~~~-g--------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~-- 349 (393)
T 2huf_A 287 RHEDCAKRLYRGLQDA-G--------FE------LYADPKDRLSTVTTIKVPQGVDWLKAAQYAMKTYLVEISGGLGP-- 349 (393)
T ss_dssp HHHHHHHHHHHHHHHT-T--------CC------BSSCGGGBCTTEEEEECCTTCCHHHHHHHHHHHHCEECBCCCGG--
T ss_pred HHHHHHHHHHHHHHHc-C--------Ce------eccCccccCCcEEEEEcCCCCCHHHHHHHHHHhCCEEEecCccc--
Confidence 5556666666666653 1 11 11000001234777877533235567777654 48877766531
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEe-cc----CChHHHHHHHHHHHhc
Q 016612 335 ISMPCFMSHASIPVEVRQARGLTEDLVRISV-GI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 335 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~~----~~~~~~i~~l~~~l~~ 383 (386)
..++++||++ +. ++++++++.|++++++
T Consensus 350 ---------------------~~~~~~Ri~~~~~~~~~e~i~~~~~~l~~~~~~ 382 (393)
T 2huf_A 350 ---------------------TAGQVFRIGLMGQNATTERVDRVLQVFQEAVAA 382 (393)
T ss_dssp ---------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred ---------------------ccCCEEEEEcccCcCCHHHHHHHHHHHHHHHHH
Confidence 0256799999 52 4588888888888765
No 93
>3ei9_A LL-diaminopimelate aminotransferase; lysine biosynthesis, pyridoxal 5' phosphat external aldimine, chloroplast, pyridox phosphate; HET: PL6; 1.55A {Arabidopsis thaliana} PDB: 3ei8_A* 3eib_A* 3ei6_A* 2z1z_A* 3ei5_A* 2z20_A* 3ei7_A 3eia_A*
Probab=99.95 E-value=2.2e-26 Score=218.68 Aligned_cols=324 Identities=14% Similarity=0.126 Sum_probs=197.8
Q ss_pred eeeccCCCCCCCCCcccceeeeeeeecCCC-CCCCCccccCC-CCc-hHHHHHHHHHhhcCCC-c-eEEeCcHHHHHHHH
Q 016612 12 LLMNFSNEFDPYGALSTPLYQTATFKQPSA-TENGPYDYTRS-GNP-TRDALESLLAKLDKAD-R-ALCFTSGMAALAAV 86 (386)
Q Consensus 12 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-~-~i~~~~gt~al~~~ 86 (386)
.+++++ .+++.-..++.+.++......+. ...+...|... |.+ +++++.+++.+.++.+ + .++++++++++.++
T Consensus 57 ~~i~l~-~~~~~~~~~~~v~~a~~~~~~~~~~~~~~~~y~~~~g~~~l~~~ia~~~~~~~~~~~~~i~~t~G~~~al~~l 135 (432)
T 3ei9_A 57 QVISLG-IGDTTEPIPEVITSAMAKKAHELSTIEGYSGYGAEQGAKPLRAAIAKTFYGGLGIGDDDVFVSDGAKCDISRL 135 (432)
T ss_dssp CCEECS-SCCCCSCCCHHHHHHHHHHHHHTTSTTTCCCCCCTTCCHHHHHHHHHHHHTTTTCCGGGEEEESCHHHHHHHH
T ss_pred CeEEcc-CCCCCCCCCHHHHHHHHHHHhcccccCCccCCCCCCCCHHHHHHHHHHHHccCCCCcceEEECCChHHHHHHH
Confidence 578888 44444334444444322111111 11334567655 554 6666666665434544 4 44555556888877
Q ss_pred HHhcCCCCEEEecCCCCCcHHHHHhhhcccCC---------cEEEEeCCCCHH----HHHhhhCCCceEEEEeCCCCCCc
Q 016612 87 THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG---------VVVKRVNTCDLD----EVASAIGPWTKLVWVESPTNPRQ 153 (386)
Q Consensus 87 ~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g---------~~~~~v~~~d~~----~l~~~~~~~~~~v~~~~~~nptG 153 (386)
.+++++||.|++++|.|+++...+.. ....+ .+++.++.++.. ++++ .+++++|++++|+||||
T Consensus 136 ~~l~~~gd~Vl~~~p~y~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~v~l~~p~NPtG 212 (432)
T 3ei9_A 136 QVMFGSNVTIAVQDPSYPAYVDSSVI-MGQTGQFNTDVQKYGNIEYMRCTPENGFFPDLST--VGRTDIIFFCSPNNPTG 212 (432)
T ss_dssp HHHHCTTCCEEEEESCCTHHHHHHHH-HTCSCCEETTTTEETTCEEEECCGGGTTSCCGGG--CCCCSEEEEESSCTTTC
T ss_pred HHHcCCCCEEEEeCCCCHHHHHHHHH-cCCcccccccccccCceEEeccCcccCCcCChhh--CCCCCEEEEeCCCCCCC
Confidence 77899999999999999998765432 22222 245555543211 2222 36789999999999999
Q ss_pred cccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----CCC----CCCccEEEeccccccccCCCceEEEEEEcChh---
Q 016612 154 QICD---IRKIAEMAHAHGALLLVDNSIMSPVLS----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGER--- 219 (386)
Q Consensus 154 ~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~----~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~--- 219 (386)
.+.+ +++|+++|+++|+++|+||+|+..... ... ..+.++++.|+||++ |.+|+|+|+++++++.
T Consensus 213 ~~~~~~~l~~l~~la~~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~r~G~~~~~~~~~~~ 291 (432)
T 3ei9_A 213 AAATREQLTQLVEFAKKNGSIIVYDSAYAMYMSDDNPRSIFEIPGAEEVAMETASFSNYA-GFTGVRLGWTVIPKKLLYS 291 (432)
T ss_dssp CCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCCSSCCSSGGGSTTGGGTEEEEEESHHHH-CTTTTCCEEEECCTTCBCT
T ss_pred CCCCHHHHHHHHHHHHHcCcEEEEccchHhhccCCCCCChhhcCCCCCeEEEEecchhcc-CCcccceEEEEEChHHhhc
Confidence 9985 777888899999999999999743221 111 124679999999999 5568999999998665
Q ss_pred ----HHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhh
Q 016612 220 ----LAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHEL 290 (386)
Q Consensus 220 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i 290 (386)
+.+.+.........+.+...+.++...+.. +....+.+.++.+.+.+.|++.. +. +
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~------~ 356 (432)
T 3ei9_A 292 DGFPVAKDFNRIICTCFNGASNISQAGALACLTPEGLEAMHKVIGFYKENTNIIIDTFTSLG---------YD------V 356 (432)
T ss_dssp TSCBHHHHHHHHHHHSCCCSCHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CC------E
T ss_pred chHHHHHHHHHHhccccCCCCHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHCC---------ce------e
Confidence 145454444444455666666665555542 23344555566666666666541 11 1
Q ss_pred hhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--
Q 016612 291 HYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-- 367 (386)
Q Consensus 291 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-- 367 (386)
. ....+.++++.+++.. ...+.+.+. ..|+.+.+|..+. + .+++++|||+..
T Consensus 357 ~---~~~~~~~~~~~~~~~~-~~~~~~~ll~~~gv~v~~g~~f~----~-----------------~~~~~iRis~~~~~ 411 (432)
T 3ei9_A 357 Y---GGKNAPYVWVHFPNQS-SWDVFAEILEKTHVVTTPGSGFG----P-----------------GGEGFVRVSAFGHR 411 (432)
T ss_dssp E---ECSSSSEEEEECTTSC-HHHHHHHHHHHHCEECEEGGGGC----G-----------------GGTTEEEEECCSCH
T ss_pred c---CCCcceEEEEECCCCC-HHHHHHHHHHHCCEEEeCchHhC----C-----------------CCCCEEEEEecCCH
Confidence 1 0123567888886322 344444443 3478777766422 0 136789999853
Q ss_pred CChHHHHHHHHHH
Q 016612 368 EDVNDLISDLDKA 380 (386)
Q Consensus 368 ~~~~~~i~~l~~~ 380 (386)
+++++.+++|++-
T Consensus 412 e~l~~~l~rl~~~ 424 (432)
T 3ei9_A 412 ENILEACRRFKQL 424 (432)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5666666666543
No 94
>3fkd_A L-threonine-O-3-phosphate decarboxylase; structural genomic, , structural genomics, PSI-2, protein structure initiative; 2.50A {Porphyromonas gingivalis}
Probab=99.95 E-value=8.2e-27 Score=215.42 Aligned_cols=313 Identities=16% Similarity=0.159 Sum_probs=207.4
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHHHH
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKAD--RALCFTSGMAALAAVTH 88 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~~~ 88 (386)
..+++++.+...++ .++.+.++ ... .. .....|... ...++++.+++++|.+ +.+++++|++++.+++.
T Consensus 15 ~~~id~~~~~~~~~-~~~~v~~a--~~~-~~--~~~~~y~~~---~~~~lr~~la~~~~~~~~~i~~t~g~~~al~~~~~ 85 (350)
T 3fkd_A 15 SEIVNFSTTVWTDG-DKDHLEKH--LVE-NL--NCIRHYPEP---DAGTLRQMLAKRNSVDNNAILVTNGPTAAFYQIAQ 85 (350)
T ss_dssp -CCEECSCCSCCCS-CCHHHHHH--HHH-TG--GGGGSCCCT---TCHHHHHHHHHHTTCCGGGEEEESHHHHHHHHHHH
T ss_pred ccEEEccCCCCCCC-CCHHHHHH--HHH-hH--hHHhcCCCC---cHHHHHHHHHHHhCcCHHHEEEcCCHHHHHHHHHH
Confidence 45788885555566 23333322 111 11 122334332 2268889999998876 45555666699986655
Q ss_pred hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHH
Q 016612 89 LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (386)
Q Consensus 89 ~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~ 167 (386)
.+. ||+|++++|+|.++. ..++..|.+++.++. ++.+.+.. +++++|++++|+||||.+.|+++|.++++.
T Consensus 86 ~l~-gd~Vi~~~p~~~~~~----~~~~~~g~~~~~v~~~~~~~~~~~---~~~~~v~i~~p~nptG~~~~~~~l~~l~~~ 157 (350)
T 3fkd_A 86 AFR-GSRSLIAIPSFAEYE----DACRMYEHEVCFYPSNEDIGEADF---SNMDFCWLCNPNNPDGRLLQRTEILRLLND 157 (350)
T ss_dssp HTT-TCEEEEEESCCHHHH----HHHHHTTCEEEEEETTSCGGGSCC---TTCSEEEEESSCTTTCCCCCHHHHHHHHHH
T ss_pred HHC-CCEEEEeCCCcHHHH----HHHHHcCCeEEEEecCCccccCcc---CCCCEEEEeCCCCCcCCCCCHHHHHHHHHh
Confidence 544 999999999998885 455678999999988 54333321 689999999999999999999999999988
Q ss_pred cC-CEEEEeCCCCCCCccC------CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhH
Q 016612 168 HG-ALLLVDNSIMSPVLSR------PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (386)
Q Consensus 168 ~~-~~li~D~a~~~~~~~~------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (386)
++ .++|+|++|+...... ....+.+++++|+||++ +.+|+|+|+++++ +++.+.+...... ...+...+
T Consensus 158 ~~~~~li~Dea~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~-~~~~~~~~~~~~~--~~~~~~~~ 233 (350)
T 3fkd_A 158 HPDTTFVLDQSYVSFTTEEVIRPADIKGRKNLVMVYSFSHAY-GIPGLRIGYIVAN-KDFMKRVAAFSTP--WAVNALAI 233 (350)
T ss_dssp CTTSEEEEECTTTTSCSSCCCCGGGGTTCSSEEEEEESHHHH-SCGGGCCEEEECC-HHHHHHHHTTCCT--TCSCHHHH
T ss_pred CCCCEEEEECchhhhccCcchhhHHhhcCCCEEEEecCchhc-cCcchheEeEEeC-HHHHHHHHHhCCC--CCCCHHHH
Confidence 75 7999999987433211 11335679999999999 5557899999984 6666655544332 34555555
Q ss_pred HHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHh
Q 016612 241 WICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVE 317 (386)
Q Consensus 241 ~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~ 317 (386)
.++...++. +..+.++..++.+.+.+.+++.+.+ .++ +..+.++++.++.. ...++.+
T Consensus 234 ~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~~~~--------------~~~----~~~~~~~~~~~~~~-~~~~l~~ 294 (350)
T 3fkd_A 234 EAAKFILIHPAQFTLPIRKWQRNTVDFITALNRLDGV--------------EVH----PSGTTFFLLRLKKG-TAAELKK 294 (350)
T ss_dssp HHHHHHHHCTTTTCCCHHHHHHHHHHHHHHHHHSTTE--------------EEC----CCSSSEEEEEESSS-CHHHHHH
T ss_pred HHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhcCCCc--------------EEC----CCCCcEEEEECCCC-CHHHHHH
Confidence 554333221 2223333446677777777765321 111 23467777888654 4667777
Q ss_pred hcCc-ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhcC
Q 016612 318 TTKY-FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRTG 384 (386)
Q Consensus 318 ~l~~-~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~~ 384 (386)
.+.. .|+.+++|..+. +..++++|||++. ++++++++.|++.+++.
T Consensus 295 ~L~~~~gi~v~~g~~f~---------------------~~~~~~iRis~~~~~~~~~l~~al~~~~~~~ 342 (350)
T 3fkd_A 295 YMLEEYNMLIRDASNFR---------------------GLDESYVRITTQRPAQNQLFIKALETFLEKY 342 (350)
T ss_dssp HHHHTTCEECEECTTST---------------------TCCTTEEEEECCCHHHHHHHHHHHHHHHTC-
T ss_pred HHHHHCCEEEEeCccCC---------------------CCCCCEEEEEcCCHHHHHHHHHHHHHHHHHh
Confidence 7777 899888776531 1246789999985 66788999998887653
No 95
>3kgw_A Alanine-glyoxylate aminotransferase; AAH25799.1, putative aminotransferase, structural genomics, center for structural genomics, JCSG; HET: PLP; 1.65A {Mus musculus} SCOP: c.67.1.3 PDB: 3kgx_A 3imz_A* 3r9a_A* 1h0c_A* 1j04_A*
Probab=99.95 E-value=4.7e-27 Score=220.23 Aligned_cols=288 Identities=15% Similarity=0.178 Sum_probs=197.7
Q ss_pred chHHHHHHHHHhhcCCC--c-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD--R-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+...++++++++++|.+ + .+++++|++++. ++..++++||+|+++.+.|.+.. +...++..|.+++.++.+
T Consensus 56 ~~~~~l~~~la~~~~~~~~~~v~~~~gg~~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~ 133 (393)
T 3kgw_A 56 QIMEEIKQGIQYVFQTRNPLTLVVSGSGHCAMETALFNLLEPGDSFLTGTNGIWGMR--AAEIADRIGARVHQMIKKPGE 133 (393)
T ss_dssp HHHHHHHHHHHHHHTCCCSEEEEESCCTTTHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCcHHHHHHHHHhcCCCCCEEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCC
Confidence 46788999999999876 2 455677789987 55668999999999988775331 235566788998888753
Q ss_pred --CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 --DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 --d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|++++++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++++.+... +....+.|+++.|+||+++
T Consensus 134 ~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~d~~~~s~sK~~~ 213 (393)
T 3kgw_A 134 HYTLQEVEEGLAQHKPVLLFLVHGESSTGVVQPLDGFGELCHRYQCLLLVDSVASLGGVPIYMDQQGIDIMYSSSQKVLN 213 (393)
T ss_dssp CCCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTTTTSCCCTTTTTCCEEEEESSSTTC
T ss_pred CCCHHHHHHHHhhCCCcEEEEeccCCcchhhccHHHHHHHHHHcCCEEEEECCccccCcccchhhcCCCEEEecCccccc
Confidence 89999999987 8999999999999999999999999999999999999999866543 2344578999999999887
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhhhh-----------------------cCCCCChhhHHHHHhcCCc-----HHHHHH
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQNA-----------------------EGSGLAPFDCWICLRGVKT-----MALRVE 255 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~-----~~~~~~ 255 (386)
|+.| +|++++++ ++.+.+...... .....+......+..+++. +....+
T Consensus 214 ~~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~ 290 (393)
T 3kgw_A 214 APPG--ISLISFND-KAKYKVYSRKTKPVSFYTDITYLAKLWGCEGETRVIHHTTPVTSLYCLRESLALIAEQGLENCWR 290 (393)
T ss_dssp CCSS--CEEEEECH-HHHHHHHTCSSCCSCSTTCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHH
T ss_pred CCCc--eeEEEECH-HHHHHHhccCCCCCceeecHHHHHHhhhhccccCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHH
Confidence 7776 68998874 454444322110 0112233333333232221 234445
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcc-eeccCCCCcccc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSL 334 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~-gi~~~~G~~~~~ 334 (386)
+..++.+.+.+.+++.. +.-... ......+.++++.++......++.+.+... |+.+.+|...
T Consensus 291 ~~~~~~~~l~~~L~~~g---------~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gi~v~~g~~~-- 354 (393)
T 3kgw_A 291 RHREATAHLHKHLQEMG---------LKFFVK-----DPEIRLPTITTVTVPAGYNWRDIVSYVLDHFSIEISGGLGP-- 354 (393)
T ss_dssp HHHHHHHHHHHHHHHTT---------CCBSSS-----SGGGBCSSEEEEECCTTBCHHHHHHHHHHHHCEECBCCCGG--
T ss_pred HHHHHHHHHHHHHHHcC---------CeeccC-----ChhhcCCeEEEEeCCCCCCHHHHHHHHHHhCCEEEeCCccc--
Confidence 55666666666666541 111100 000112455667775444466777777666 8887776531
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEe-c----cCChHHHHHHHHHHHhcC
Q 016612 335 ISMPCFMSHASIPVEVRQARGLTEDLVRISV-G----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 335 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~----~~~~~~~i~~l~~~l~~~ 384 (386)
..++++|+++ + .++++++++.|++++++.
T Consensus 355 ---------------------~~~~~iRi~~~~~~~~~~~i~~~~~~l~~~l~~~ 388 (393)
T 3kgw_A 355 ---------------------TEERVLRIGLLGYNATTENVDRVAEALREALQHC 388 (393)
T ss_dssp ---------------------GTTTEEEEECCGGGCCHHHHHHHHHHHHHHHHHS
T ss_pred ---------------------CCCCEEEEEecccCCCHHHHHHHHHHHHHHHHhh
Confidence 1356899998 4 478889999999988764
No 96
>4eb5_A Probable cysteine desulfurase 2; scaffold, transferase-metal binding protein complex; HET: PLP EPE; 2.53A {Archaeoglobus fulgidus} PDB: 4eb7_A*
Probab=99.95 E-value=2.4e-26 Score=214.65 Aligned_cols=301 Identities=17% Similarity=0.132 Sum_probs=194.0
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHHH-HHHhc----CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALAA-VTHLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~-~~~~~----~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
+...++++++++++|.+ +.+++++|++|+.+ +.++. ++||+|+++++.|+++...+. .++..|.+++.++.+
T Consensus 43 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~l~~~~~~~gd~Vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~ 121 (382)
T 4eb5_A 43 EAVQEAREKVAKLVNGGGGTVVFTSGATEANNLAIIGYAMRNARKGKHILVSAVEHMSVINPAK-FLQKQGFEVEYIPVG 121 (382)
T ss_dssp HHHHHHHHHHHHHHTCTTEEEEEESSHHHHHHHHHHHHHHHHGGGCCEEEEETTCCHHHHHHHH-HHTTTTCEEEEECBC
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEcCchHHHHHHHHHHHHhhccCCCCEEEECCCcchHHHHHHH-HHHhCCcEEEEeccC
Confidence 46888999999999986 45666677899874 45555 899999999999998866553 344579999998863
Q ss_pred -----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 128 -----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 128 -----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
|++++++.+++++++|++++++||||.+.|+++|.++|+++|++ |+|++|+.+... +....+.|++++|+||+
T Consensus 122 ~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~-i~D~a~~~g~~~~~~~~~~~di~~~s~sK~ 200 (382)
T 4eb5_A 122 KYGEVDVSFIDQKLRDDTILVSVQHANNEIGTIQPVEEISEVLAGKAAL-HIDATASVGQIEVDVEKIGADMLTISSNDI 200 (382)
T ss_dssp TTSCBCHHHHHHHCCTTEEEEECCSBCTTTCBBCCHHHHHHHHTTSSEE-EEECTTTBTTBCCCHHHHTCSEEEEETGGG
T ss_pred CCCccCHHHHHHHhcCCCeEEEEeccCCCccccCCHHHHHHHHHHCCCE-EEEcchhcCCcccCccccCCCEEEeehHHh
Confidence 89999999998999999999999999999999999999999999 999999865442 11223689999999998
Q ss_pred cccCCCceEEEEEEcChh-HHHHHHH---hhhhcCCCCChhhHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHhhCCC
Q 016612 202 IAGHSDVMAGVLAVKGER-LAKELYF---LQNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
+ |+.| +|+++++++. +...... .........+......+..+++. +....++..++.+.+.+.|++.+
T Consensus 201 ~-g~~g--~G~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~~~- 276 (382)
T 4eb5_A 201 Y-GPKG--VGALWIRKEAKLQPVILGGGQENGLRSGSENVPSIVGFGKAAEITAMEWREEAERLRRLRDRIIDNVLKIE- 276 (382)
T ss_dssp T-CCSS--CEEEEEETTCCCCCSSCSSCTGGGTSCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTST-
T ss_pred c-CCCc--eEEEEEccccccCceecCCCccccccCCCccHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhhCC-
Confidence 6 6666 5888887652 2110000 00111112233333332222222 22233344444555555554432
Q ss_pred cceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
+..+..+.....++++++.+++. ...++.+.+...|+.+++|..+... . ..+......
T Consensus 277 -------------~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~----~----~~~~~~~~~ 334 (382)
T 4eb5_A 277 -------------ESYLNGHPEKRLPNNVNVRFSYI-EGESIVLSLDMAGIQASTGSACSSK----T----LQPSHVLMA 334 (382)
T ss_dssp -------------TEEECSCSSSBCTTEEEEEETTS-CHHHHHHHHHHHTCBCBCCCGGGTS----S----CCCCHHHHH
T ss_pred -------------CeEEeCCcccCCCCEEEEEeCCc-CHHHHHHHHHHCCEEEeccccccCC----C----CcccHHHHH
Confidence 22211110011256788887632 3556777777778888877642211 0 001111222
Q ss_pred cCCC----CCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 354 RGLT----EDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 354 ~~~~----~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
+|.. ++++||+++. ++++++++.|++++++
T Consensus 335 ~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 372 (382)
T 4eb5_A 335 CGLKHEEAHGTLLLTLGRYNTDEDVDRLLEVLPGVIER 372 (382)
T ss_dssp TTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred cCCChhccCCeEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 3332 5789999973 6777777777777654
No 97
>3cq5_A Histidinol-phosphate aminotransferase; PLP, PMP, amino-acid biosynthesis, histidine biosynthesis, pyridoxal phosphate; HET: PMP; 1.80A {Corynebacterium glutamicum} PDB: 3cq6_A* 3cq4_A
Probab=99.95 E-value=8.4e-26 Score=210.16 Aligned_cols=282 Identities=13% Similarity=0.160 Sum_probs=191.0
Q ss_pred ccccCC-CCchHHHHHHHHHhhcC--CC-ceEEeCcH-HHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 47 YDYTRS-GNPTRDALESLLAKLDK--AD-RALCFTSG-MAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 47 ~~y~~~-g~~~~~~l~~~l~~~~g--~~-~~i~~~~g-t~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
..|... +..+++++.+++.+.+| .+ +.+++++| ++++. ++.+++++||+|++++|+|+++. ..++..|.+
T Consensus 64 ~~y~~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~G~~~al~~~~~~l~~~gd~Vl~~~~~y~~~~----~~~~~~g~~ 139 (369)
T 3cq5_A 64 NRYPERDAVELRDELAAYITKQTGVAVTRDNLWAANGSNEILQQLLQAFGGPGRTALGFQPSYSMHP----ILAKGTHTE 139 (369)
T ss_dssp TSCCCTTCHHHHHHHHHHHHHHHCCCCCGGGEEEESHHHHHHHHHHHHHCSTTCEEEEEESSCTHHH----HHHHHTTCE
T ss_pred ccCCCccHHHHHHHHHHhhhhcccCCCChHhEEECCChHHHHHHHHHHhcCCCCEEEEcCCChHHHH----HHHHHcCCE
Confidence 445544 32356666666655544 33 44555555 58886 55567899999999999999886 345567888
Q ss_pred EEEeCCC-----CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CC----CCC
Q 016612 121 VKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RP----LEL 189 (386)
Q Consensus 121 ~~~v~~~-----d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~----~~~ 189 (386)
++.++.+ |++++++.+++ ++++|++++|+||||.+.|++++.++|+.+++++|+|++|+.+... .. ...
T Consensus 140 ~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~ 219 (369)
T 3cq5_A 140 FIAVSRGADFRIDMDVALEEIRAKQPDIVFVTTPNNPTGDVTSLDDVERIINVAPGIVIVDEAYAEFSPSPSATTLLEKY 219 (369)
T ss_dssp EEEEECCTTSSCCHHHHHHHHHHHCCSEEEEESSCTTTCCCCCHHHHHHHHHHCSSEEEEECTTGGGCCSCCGGGGTTTC
T ss_pred EEEecCCcCCCCCHHHHHHHhhccCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCCCEEEEECCchhhcCCcchHHHHhhC
Confidence 8888743 78999998876 8999999999999999999999999999999999999999754421 11 123
Q ss_pred C-ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHH
Q 016612 190 G-ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIA 265 (386)
Q Consensus 190 ~-~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~ 265 (386)
+ .++++.|+||++ |.+|+|+|++++++ ++.+.+...... ...+...++++...++. +....+...++.+.+.
T Consensus 220 ~~~~i~~~s~sK~~-~~~G~r~G~~~~~~-~~~~~l~~~~~~--~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~l~ 295 (369)
T 3cq5_A 220 PTKLVVSRTMSKAF-DFAGGRLGYFVANP-AFIDAVMLVRLP--YHLSALSQAAAIVALRHSADTLGTVEKLSVERVRVA 295 (369)
T ss_dssp TTTEEEEEESSSTT-SCGGGCCEEEEECT-HHHHHHHTTSCT--TCSCHHHHHHHHHHHHTHHHHHTHHHHHHHHHHHHH
T ss_pred CCCEEEEEechHhc-CCcccceEEEEeCH-HHHHHHHHcCCC--CCCCHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHH
Confidence 5 679999999999 44578999999974 455555443322 23555555555444432 2233444555556666
Q ss_pred HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCC
Q 016612 266 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 345 (386)
Q Consensus 266 ~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~ 345 (386)
+.+++.. + .+. +..++++++.++ ....++.+.+..+|+.+.+|+
T Consensus 296 ~~L~~~g---------~------~~~----~~~~~~~~~~~~--~~~~~l~~~l~~~gi~v~~~~--------------- 339 (369)
T 3cq5_A 296 ARLEELG---------Y------AVV----PSESNFVFFGDF--SDQHAAWQAFLDRGVLIRDVG--------------- 339 (369)
T ss_dssp HHHHHHT---------C------EEE----CCSSSEEEEECC--SSHHHHHHHHHHTTEECBCCS---------------
T ss_pred HHHHhCC---------C------EEC----CCCCeEEEEECC--CCHHHHHHHHHHCCEEEEECC---------------
Confidence 6665421 1 111 124577888775 234566666767788776651
Q ss_pred CCHHHHHhcCCCCCeEEEEecc-CChHHHHHHHHHHHhc
Q 016612 346 IPVEVRQARGLTEDLVRISVGI-EDVNDLISDLDKALRT 383 (386)
Q Consensus 346 ~~~~~~~~~~~~~~~iRis~~~-~~~~~~i~~l~~~l~~ 383 (386)
.++++|+|++. ++++++++.|+++++.
T Consensus 340 -----------~~~~iRis~~~~~~i~~~~~~l~~~~~~ 367 (369)
T 3cq5_A 340 -----------IAGHLRTTIGVPEENDAFLDAAAEIIKL 367 (369)
T ss_dssp -----------CTTEEEEECCCHHHHHHHHHHHHHHHTT
T ss_pred -----------CCCeEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 14569999973 6677788888777653
No 98
>1bw0_A TAT, protein (tyrosine aminotransferase); tyrosine catabolism, pyridoxal-5'-phosphate, PLP; HET: LLP; 2.50A {Trypanosoma cruzi} SCOP: c.67.1.1
Probab=99.95 E-value=1.7e-25 Score=211.48 Aligned_cols=291 Identities=15% Similarity=0.135 Sum_probs=189.6
Q ss_pred ccccCC-CCc-hHHHHHHHHHhh------c----CCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhh
Q 016612 47 YDYTRS-GNP-TRDALESLLAKL------D----KADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRV 113 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~------~----g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~ 113 (386)
..|... |.+ +++++.+++.+. . ..++.+++++|++++. ++..++++||+|++++|+|+++. ..
T Consensus 69 ~~y~~~~~~~~lr~~la~~~~~~~~~~~~~~~~~~~~~v~~~~g~~~al~~~~~~l~~~gd~vl~~~p~y~~~~----~~ 144 (416)
T 1bw0_A 69 NGYFPTVGSPEAREAVATWWRNSFVHKEELKSTIVKDNVVLCSGGSHGILMAITAICDAGDYALVPQPGFPHYE----TV 144 (416)
T ss_dssp SSCCCTTCCHHHHHHHHHHHHHHHCCSTTTGGGCCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCTHHH----HH
T ss_pred CCcCCCCCCHHHHHHHHHHHHhhhcccccCCCCCCcceEEEeCChHHHHHHHHHHhCCCCCEEEEcCCCcHhHH----HH
Confidence 456654 554 677777776631 1 2335666666679987 45557899999999999999886 44
Q ss_pred cccCCcEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 114 TPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 114 ~~~~g~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
++..|.+++.++. .|++++++.++++++++++++|+||||.+.| +++|.++|+++|++||+|++|+...+
T Consensus 145 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~ 224 (416)
T 1bw0_A 145 CKAYGIGMHFYNCRPENDWEADLDEIRRLKDDKTKLLIVTNPSNPCGSNFSRKHVEDIVRLAEELRLPLFSDEIYAGMVF 224 (416)
T ss_dssp HHHTTCEEEEEEEEGGGTTEECHHHHHHHCCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCCEEEECTTTTCBC
T ss_pred HHHcCcEEEEeecCcccCCCCCHHHHHHHhccCCeEEEEeCCCCCCCcccCHHHHHHHHHHHHHcCCEEEEEcccccccc
Confidence 5577888888764 2789999999888999999999999999998 99999999999999999999875221
Q ss_pred ---------cCCCC---CCccEEEeccccccccCCCceEEEEEEcCh-hH----HHHHHHhhhhcCCCCChhhHHHHHhc
Q 016612 184 ---------SRPLE---LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RL----AKELYFLQNAEGSGLAPFDCWICLRG 246 (386)
Q Consensus 184 ---------~~~~~---~~~di~~~S~sK~~~g~~g~~~G~i~~~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (386)
..... .+.+++++|+||+++ .+|+|+|+++++++ .+ ......... ...+.+...++++...
T Consensus 225 ~g~~~~~~~~~~~~~~~~~~~i~~~s~sK~~~-~~Glr~G~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~a~~~~ 302 (416)
T 1bw0_A 225 KGKDPNATFTSVADFETTVPRVILGGTAKNLV-VPGWRLGWLLYVDPHGNGPSFLEGLKRVGM-LVCGPCTVVQAALGEA 302 (416)
T ss_dssp CSSCTTCCCCCTTSSCCSCCEEEEEESTTTTS-CGGGCCEEEEEECTTCSCHHHHHHHHHHHH-HHTCSCHHHHHHHHHH
T ss_pred CCCCCCCCccCHHHccCCCcEEEEecchhhCC-CCCceEEEEEeeCchhhHHHHHHHHHHHhc-cccCCCcHHHHHHHHH
Confidence 11111 124688999999984 45789999998765 22 222222211 1223455555554443
Q ss_pred CCc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----HhHHHHH
Q 016612 247 VKT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----ALSKHVV 316 (386)
Q Consensus 247 ~~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----~~~~~l~ 316 (386)
++. +....++..++.+.+.+.|++.+ ++.+.. ...+.++++.++.. .....+.
T Consensus 303 l~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--------------g~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 365 (416)
T 1bw0_A 303 LLNTPQEHLDQIVAKIEESAMYLYNHIGECI--------------GLAPTM---PRGAMYLMSRIDLEKYRDIKTDVEFF 365 (416)
T ss_dssp HHSSCHHHHHHHHHHHHHHHHHHHHHHTTST--------------TEEECC---CCBTTEEEEEECGGGBSSCCSHHHHH
T ss_pred HhcccHHHHHHHHHHHHHHHHHHHHHHHhCC--------------CCcccC---CCeeEEEEEeCCHHHcCCCCCHHHHH
Confidence 321 22333444455555555555432 222110 11255667776421 2345666
Q ss_pred hhc-CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 317 ETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 317 ~~l-~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
+.+ ...|+.+.+|..+. .++++|||++. +++++.++.|.+++++
T Consensus 366 ~~l~~~~gi~v~~g~~f~-----------------------~~~~iRis~~~~~e~l~~~l~~l~~~l~~ 412 (416)
T 1bw0_A 366 EKLLEEENVQVLPGTIFH-----------------------APGFTRLTTTRPVEVYREAVERIKAFCQR 412 (416)
T ss_dssp HHHHHHHCEECEEGGGGT-----------------------CTTEEEEECCSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHCCEEEecccccC-----------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 665 46788877765421 14679999963 6677778888887765
No 99
>1eg5_A Aminotransferase; PLP-dependent enzymes, iron-sulfur-cluster synthesis, C-S BE transferase; HET: PLP; 2.00A {Thermotoga maritima} SCOP: c.67.1.3 PDB: 1ecx_A*
Probab=99.95 E-value=2.1e-26 Score=215.10 Aligned_cols=301 Identities=14% Similarity=0.091 Sum_probs=195.5
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHhc----CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THLL----GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~~----~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
...++++.+++++|.+ +.+++++|++++.++ ..+. ++||+|++++|.|+++...+. .++..|.+++.++.+
T Consensus 45 ~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~-~~~~~g~~~~~v~~~~ 123 (384)
T 1eg5_A 45 HMEKAREKVAKVLGVSPSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMK-YLSMKGFKVKYVPVDS 123 (384)
T ss_dssp HHHHHHHHHHHHHTSCGGGEEEESCHHHHHHHHHHHHHHHTTTTCCEEEECTTSCHHHHHHHH-HHHHTTCEEEECCBCT
T ss_pred HHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHHhhhhhccCCCCEEEECCCCchHHHHHHH-HHHhcCCEEEEEccCC
Confidence 5688999999999976 566777778998754 4455 799999999999988865542 335678999998863
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcC--CEEEEeCCCCCCCcc-CCCCCCccEEEecccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNSIMSPVLS-RPLELGADIVMHSATK 200 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~--~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK 200 (386)
|++++++.+++++++|++++|+||||.+.|+++|.++|+++| +++|+|++|+.+... +....+.|++++|+||
T Consensus 124 ~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~sK 203 (384)
T 1eg5_A 124 RGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHK 203 (384)
T ss_dssp TSCBCHHHHHHHCCTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHCTTCEEEEECTTTTTTSCCCCTTTCCSEEEEEGGG
T ss_pred CCccCHHHHHHHhCCCCeEEEEECCCCCcccccCHHHHHHHHHhcCCceEEEEEhhhhcCCcccCchhcCCCEEEecHHH
Confidence 899999999989999999999999999999999999999999 999999999865432 2223478999999999
Q ss_pred ccccCCCceEEEEEEcChh-HHHHHHHh---hhhcCCCCChhhHHHHHhcCCc----HHHHHHHHHHHHHHHHHHHhhCC
Q 016612 201 FIAGHSDVMAGVLAVKGER-LAKELYFL---QNAEGSGLAPFDCWICLRGVKT----MALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
++ |++| +|+++++++. +...+... ........+.....++..+++. +....++..++.+.+.+.|++ .
T Consensus 204 ~~-g~~G--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~~L~~-~ 279 (384)
T 1eg5_A 204 FH-GPKG--VGITYIRKGVPIRPLIHGGGQERGLRSGTQNVPGIVGAARAMEIAVEELSEAAKHMEKLRSKLVSGLMN-L 279 (384)
T ss_dssp GT-SCTT--CEEEEECTTSCCCCSBCSSCTTTTTBCSCCCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHT-T
T ss_pred hc-CCCc--eEEEEEcCCCccccccccCcccccccCCCCChHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHhCC-C
Confidence 87 6666 5999987652 11111000 0011123444444433333332 233444555566666666654 2
Q ss_pred CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 273 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
.+ .+........+.++++.+.+. ....+.+.+...|+.+.+|..+... +.. +.....
T Consensus 280 g~--------------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~gi~v~~g~~~~~~--~~~------~~~~~~ 336 (384)
T 1eg5_A 280 GA--------------HIITPLEISLPNTLSVSFPNI-RGSTLQNLLSGYGIYVSTSSACTSK--DER------LRHVLD 336 (384)
T ss_dssp TC--------------EECSCTTSBCTTEEEEECTTC-CHHHHHHHHHHTTEECBC--------------------CHHH
T ss_pred Ce--------------EEeCCcccCCCCEEEEEeCCC-CHHHHHHHHhhCCeEEeccccccCC--CCc------chHHHH
Confidence 11 111000011245677776532 3556777777788988877642210 000 000111
Q ss_pred hcCCC----CCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 353 ARGLT----EDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 353 ~~~~~----~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
..+.. ++++||+++ .++++++++.|+++++++
T Consensus 337 ~~g~~~~~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 376 (384)
T 1eg5_A 337 AMGVDRRIAQGAIRISLCKYNTEEEVDYFLKKIEEILSFL 376 (384)
T ss_dssp HTTCCHHHHHHEEEEECCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HcCCChhhcCCeEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 12222 468999997 378888888888887654
No 100
>1iug_A Putative aspartate aminotransferase; wild type, pyridoxal-5'-phosphate form, riken structural genomics/proteomics initiative, RSGI; HET: LLP; 2.20A {Thermus thermophilus} SCOP: c.67.1.3
Probab=99.94 E-value=1.6e-26 Score=213.33 Aligned_cols=280 Identities=14% Similarity=0.064 Sum_probs=190.9
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
...++++++++++|.+ +.+++++|++++. ++.+++++||+|++++|+|+++. +...++..|.+++.++.+
T Consensus 35 ~~~~l~~~la~~~g~~~~~i~~~~g~t~a~~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~~ 112 (352)
T 1iug_A 35 VFLKARGLLREAFRTEGEVLILTGSGTLAMEALVKNLFAPGERVLVPVYGKFSER--FYEIALEAGLVVERLDYPYGDTP 112 (352)
T ss_dssp HHHHHHHHHHHHHTCSSEEEEEESCHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHTTCEEEEEECCTTCCC
T ss_pred HHHHHHHHHHHHhCCCCceEEEcCchHHHHHHHHHhccCCCCeEEEEeCCchhHH--HHHHHHHcCCceEEEeCCCCCCC
Confidence 5788999999999986 4556667789987 45567899999999999998874 234556678898888763
Q ss_pred CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCcc-CCCCCCccEEEecccccccc
Q 016612 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (386)
Q Consensus 128 d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (386)
|++++++ +++++|++++++||||.+.|+++|.++|+++ |+++|+|++|+.+... +....+.|++++|+||++.+
T Consensus 113 d~~~l~~---~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~ 189 (352)
T 1iug_A 113 RPEDVAK---EGYAGLLLVHSETSTGALADLPALARAFKEKNPEGLVGADMVTSLLVGEVALEAMGVDAAASGSQKGLMC 189 (352)
T ss_dssp CTTTSCC---SSCSEEEEESEETTTTEECCHHHHHHHHHHHCTTCEEEEECTTTBTTBCCCSGGGTCSEEEEESSSTTCC
T ss_pred CHHHHhc---cCCcEEEEEEecCCcceecCHHHHHHHHHhhCCCCEEEEECCccccCcceeccccCeeEEEecCcccccC
Confidence 5666665 6789999999999999999999999999999 9999999999866543 22234689999999998878
Q ss_pred CCCceEEEEEEcChhHHHH---------HH----Hhh-hhcCCCCChhhHHHHHhcCC----cHHHHHHHHHHHHHHHHH
Q 016612 205 HSDVMAGVLAVKGERLAKE---------LY----FLQ-NAEGSGLAPFDCWICLRGVK----TMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~---------~~----~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~ 266 (386)
+.| +|+++++++.+ +. +. ... .......+......+..+++ .+....++..++.+.+.+
T Consensus 190 ~~g--~G~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~l~~ 266 (352)
T 1iug_A 190 PPG--LGFVALSPRAL-ERLKPRGYYLDLARELKAQKEGESAWTPAINLVLAVAAVLEEVLPRLEEHLALKAWQNALLYG 266 (352)
T ss_dssp CSC--EEEEEECHHHH-HTCCCCSSTTCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHH
T ss_pred CCc--eeEEEECHHHH-HHhhCCCceeeHHHHHhhcccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 766 69998875433 22 11 111 11112233333332222221 234455556666677777
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCC
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 346 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~ 346 (386)
.+++. .+ ....+ ...+.++++.+++.....++.+.+...|+.+++|.. +
T Consensus 267 ~L~~~-g~-~~~~~---------------~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------~-------- 315 (352)
T 1iug_A 267 VGEEG-GL-RPVPK---------------RFSPAVAAFYLPEGVPYARVKEAFAQRGAVIAGGQG------P-------- 315 (352)
T ss_dssp HHHHT-TC-EESCS---------------SBCTTCEEEECCTTCCHHHHHHHHHTTTEECEECCG------G--------
T ss_pred HHHHC-CC-ccccc---------------ccCCeEEEEEcCCCCCHHHHHHHHHHCCEEEEeCCC------c--------
Confidence 77654 11 11100 013567888876333356777777777887776552 0
Q ss_pred CHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 347 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
..++++|++++. ++++++++.|++++++
T Consensus 316 ---------~~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~ 347 (352)
T 1iug_A 316 ---------LKGKVFRLSLMGAYDRYEALGVAGMFREVLEE 347 (352)
T ss_dssp ---------GTTTEEEECCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ---------cCCCEEEEEccccCCHHHHHHHHHHHHHHHHH
Confidence 125679999973 6677777777777654
No 101
>2ch1_A 3-hydroxykynurenine transaminase; PLP-enzyme, kynurenine pathway, transferase; HET: LLP; 2.4A {Anopheles gambiae} SCOP: c.67.1.3 PDB: 2ch2_A*
Probab=99.94 E-value=9.3e-27 Score=218.60 Aligned_cols=286 Identities=14% Similarity=0.156 Sum_probs=192.0
Q ss_pred hHHHHHHHHHhhcCCC-c-eE-EeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-----
Q 016612 56 TRDALESLLAKLDKAD-R-AL-CFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-~-~i-~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----- 126 (386)
...++++.+++++|.+ + .+ ++++|++++. ++.+++++||+|++++|+|+++. +...++..|.+++.++.
T Consensus 52 ~~~~l~~~la~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~gd~vl~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~~~ 129 (396)
T 2ch1_A 52 TMDEVKDGLRYIFQTENRATMCVSGSAHAGMEAMLSNLLEEGDRVLIAVNGIWAER--AVEMSERYGADVRTIEGPPDRP 129 (396)
T ss_dssp HHHHHHHHHHHHHTCCCSCEEEESSCHHHHHHHHHHHHCCTTCEEEEEESSHHHHH--HHHHHHHTTCEEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHHhcCCCCeEEEEcCCcccHH--HHHHHHHcCCceEEecCCCCCC
Confidence 5788999999999986 3 45 5566679987 45557899999999999998873 22456678899988885
Q ss_pred CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccccc
Q 016612 127 CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIAG 204 (386)
Q Consensus 127 ~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~g 204 (386)
.|++++++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+... +....+.|+++.|++|++++
T Consensus 130 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~d~~~~s~~K~~~~ 209 (396)
T 2ch1_A 130 FSLETLARAIELHQPKCLFLTHGDSSSGLLQPLEGVGQICHQHDCLLIVDAVASLCGVPFYMDKWEIDAVYTGAQKVLGA 209 (396)
T ss_dssp CCHHHHHHHHHHHCCSEEEEESEETTTTEECCCTTHHHHHHHTTCEEEEECTTTBTTBCCCTTTTTCCEEECCCC-CCCC
T ss_pred CCHHHHHHHHHhCCCCEEEEECCCCCCceecCHHHHHHHHHHcCCEEEEEccccccCCccchhhcCcCEEEEcCCccccC
Confidence 389999999886 8999999999999999999999999999999999999999865433 22344679999999999888
Q ss_pred CCCceEEEEEEcChhHHHHHHHhh-----------------------hhcCCCCChhhHHHHHhcCCc-----HHHHHHH
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQ-----------------------NAEGSGLAPFDCWICLRGVKT-----MALRVEK 256 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 256 (386)
+.| +|++++++ .+.+.+.... .......+...+.++..+++. +....++
T Consensus 210 ~~g--~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~ 286 (396)
T 2ch1_A 210 PPG--ITPISISP-KALDVIRNRRTKSKVFYWDLLLLGNYWGCYDEPKRYHHTVASNLIFALREALAQIAEEGLENQIKR 286 (396)
T ss_dssp CSS--CEEEEECH-HHHHHHHTCSSCCSCGGGCHHHHHHHTTCSSSCCCCCCCCCHHHHHHHHHHHHHHHHHCHHHHHHH
T ss_pred CCC--eEEEEECH-HHHHhhhhccCcccceEechHHHHHhhhhhcccCCCCCCCcHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 777 48888875 4444442210 000012233333333333322 2334445
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc-ceeccCCCCccccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY-FSITVSFGSVKSLI 335 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~gi~~~~G~~~~~~ 335 (386)
..++.+.+.+.|++.. +.-.+... ....+.++++.++......++.+.+.. .|+.+++|...
T Consensus 287 ~~~~~~~l~~~L~~~g---------~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~g~~~--- 349 (396)
T 2ch1_A 287 RIECAQILYEGLGKMG---------LDIFVKDP-----RHRLPTVTGIMIPKGVDWWKVSQYAMNNFSLEVQGGLGP--- 349 (396)
T ss_dssp HHHHHHHHHHHHHHHT---------CCBSSCSG-----GGBCTTEEEEECCTTCCHHHHHHHHHHHHCBCCBCCCGG---
T ss_pred HHHHHHHHHHHHHHCC---------CeeccCCc-----cccCCceEEEEcCCCCCHHHHHHHHHHhCCEEEecCccc---
Confidence 5555666666665431 11110000 001234778877533335667777654 38877665421
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEe-c----cCChHHHHHHHHHHHhc
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISV-G----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~----~~~~~~~i~~l~~~l~~ 383 (386)
..++++||++ + .++++++++.|++++++
T Consensus 350 --------------------~~~~~iRi~~~~~~~~~e~i~~~~~~l~~~l~~ 382 (396)
T 2ch1_A 350 --------------------TFGKAWRVGIMGECSTVQKIQFYLYGFKESLKA 382 (396)
T ss_dssp --------------------GTTTEEEEECCGGGCSHHHHHHHHHHHHHHHHH
T ss_pred --------------------cCCCEEEEECCCCcCCHHHHHHHHHHHHHHHHH
Confidence 1356799999 4 36788889988888765
No 102
>3qgu_A LL-diaminopimelate aminotransferase; L-lysine, pyridoxal-5' phosphate, chamydomonas reinhardtii; HET: GOL; 1.55A {Chlamydomonas reinhardtii}
Probab=99.94 E-value=1.8e-26 Score=220.44 Aligned_cols=293 Identities=15% Similarity=0.125 Sum_probs=188.1
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhc--CCC--ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLD--KAD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~--g~~--~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
....|.+. |.+ +++++.+++. . +.+ +.++++++++++.++.+++++||+|++++|+|+++...+ +..|
T Consensus 103 ~~~~y~~~~g~~~lr~~ia~~~~--~g~~~~~~~i~~t~G~~~al~~~~~l~~~gd~Vl~~~p~~~~~~~~~----~~~g 176 (449)
T 3qgu_A 103 GYSGYGAEQGQGALREAVASTFY--GHAGRAADEIFISDGSKCDIARIQMMFGSKPTVAVQDPSYPVYVDTS----VMMG 176 (449)
T ss_dssp CCCCSTTTTCCHHHHHHHHHHHH--TTTTCCGGGEEEESCHHHHHHHHHHHHCSSSCEEEEESCCTHHHHHH----HHHT
T ss_pred CCCCCCCCCCcHHHHHHHHHHHH--cCCCCCHHHEEEccCHHHHHHHHHHHhCCCCEEEEcCCCChhHHHHH----HHcC
Confidence 34567654 554 4555555544 2 333 455555666999866778999999999999999986443 4455
Q ss_pred cE----------EEEeCCCCHHHHHhhhC--CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 119 VV----------VKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 119 ~~----------~~~v~~~d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
.+ ++.++.++.+.+...+. +++++|++++|+||||.+.+ +++|+++|+++|+++|+||+|+....
T Consensus 177 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~p~NPtG~~~~~~~l~~l~~l~~~~~~~li~Dea~~~~~~ 256 (449)
T 3qgu_A 177 MTGDHNGTGFDGIEYMVCNPDNHFFPDLSKAKRTDIIFFCSPNNPTGAAATRAQLTELVNFARKNGSILVYDAAYALYIS 256 (449)
T ss_dssp CSCCBCSSSBTTEEEEECCGGGTTCCCGGGCCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEECTTGGGCC
T ss_pred CcccccccccceeEEEecccccCCcCChhHcCCCCEEEEeCCCCCCCCcCCHHHHHHHHHHHHHCCcEEEEEcchHhhhc
Confidence 55 77777643222221121 58999999999999999986 88899999999999999999875322
Q ss_pred c-----CCC----CCCccEEEeccccccccCCCceEEEEEEcChhHH-------HHHHHhhhhcCCCCChhhHHHHHhcC
Q 016612 184 S-----RPL----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-------KELYFLQNAEGSGLAPFDCWICLRGV 247 (386)
Q Consensus 184 ~-----~~~----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (386)
. ... ..+.++++.|+||++ |.+|+|+|+++++++.+. ..+.........+.+...+.++...+
T Consensus 257 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~-g~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l 335 (449)
T 3qgu_A 257 NPDCPKTIYEIPGADEVAIETCSFSKYA-GFTGVRLGWTVVPKALKYANGEPVHADWNRVMTTCFNGASNIVQAGGLACL 335 (449)
T ss_dssp CTTSCSSGGGSTTGGGTEEEEEECSGGG-TCTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHSCCCCCHHHHHHHHHHT
T ss_pred CCCCCCCHhhccCCCCcEEEEecchhhc-CCccceeEEEecCHHHHhhhhhhHHHHHHHHhhcccCCCCHHHHHHHHHHH
Confidence 1 111 125679999999999 556789999999765432 13333333334456666666666655
Q ss_pred Cc-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCc-
Q 016612 248 KT-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKY- 321 (386)
Q Consensus 248 ~~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~- 321 (386)
.. +....+.+.++.+.+.+.|++.. + .+. ....+.++++.++ .....++.+.+..
T Consensus 336 ~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~------~~~---~~~~~~~~~~~~~-~~~~~~~~~~l~~~ 396 (449)
T 3qgu_A 336 QPEGLKEMNAMIKFYKENAQILKTTFTEMG---------F------SVY---GGDDAPYIWVGFP-GKPSWDVFAEILER 396 (449)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------C------CEE---ESSSSSEEEEECT-TSCHHHHHHHHHHH
T ss_pred hhcCHHHHHHHHHHHHHHHHHHHHHHHHCC---------C------eee---CCCCeeEEEEECC-CCCHHHHHHHHHHH
Confidence 53 23334455556666666666531 1 111 0123567787776 2234455555544
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHhcC
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~~~ 384 (386)
.|+.+.+|..+.. .++++||||+. .+++++.++.|++++++-
T Consensus 397 ~gI~v~pg~~f~~---------------------~~~~~iRis~~~~~e~i~~~l~~l~~~~~~~ 440 (449)
T 3qgu_A 397 CNIVTTPGSGYGP---------------------AGEGFVRASAFGSRENILEAVRRFKEAYGKR 440 (449)
T ss_dssp HCEECEEGGGGCG---------------------GGTTEEEEECCSCHHHHHHHHHHHHHHHC--
T ss_pred CCEEEecchHhCC---------------------CCCCeEEEEecCCHHHHHHHHHHHHHHHHhc
Confidence 3787777654220 13678999974 478888899998888653
No 103
>3frk_A QDTB; aminotransferase, sugar-modification, natural porduct; HET: TQP; 2.15A {Thermoanaerobacteriumthermosaccharolyticum}
Probab=99.94 E-value=1.8e-26 Score=215.03 Aligned_cols=302 Identities=16% Similarity=0.142 Sum_probs=201.4
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+...++++.+++++|.++.+++++|++|+. ++.++ +++||+|+++.++|+++... ++..|.+++.++.+
T Consensus 35 ~~~~~~l~~~la~~~~~~~~i~~~sgt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~ 110 (373)
T 3frk_A 35 GDEDKKFEQEFADYCNVNYCIGCGNGLDALHLILKGYDIGFGDEVIVPSNTFIATALA----VSYTGAKPIFVEPDIRTY 110 (373)
T ss_dssp SHHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEETTSCTHHHHH----HHHHSCEEEEECEETTTT
T ss_pred CchHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEecccccc
Confidence 3578899999999999999999999999987 45556 78999999999999998643 45678888888764
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCC--ccEEEeccc--cc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSAT--KF 201 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~--~di~~~S~s--K~ 201 (386)
|++++++++++++++|+ ++||+|...|+++|.++|+++|+++|+|++|+.+...+....+ .|++++|++ |+
T Consensus 111 ~~d~~~l~~~l~~~~~~v~---~~n~~G~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~S~~~~K~ 187 (373)
T 3frk_A 111 NIDPSLIESAITEKTKAII---AVHLYGQPADMDEIKRIAKKYNLKLIEDAAQAHGSLYKGMKVGSLGDAAGFSFYPAKN 187 (373)
T ss_dssp EECGGGTGGGCCTTEEEEE---EECCTTCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred CcCHHHHHHhcCCCCeEEE---EECCCcCcccHHHHHHHHHHcCCEEEEECCcccCCEECCEeccccccEEEEeCcCCCc
Confidence 89999999998999888 7789999999999999999999999999999877654333334 799999976 99
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcC------------CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHh
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 269 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 269 (386)
+++++ ++|+++++++.+.+.+........ ..+++..+++....++.+....++..++.+.+.+.+.
T Consensus 188 l~~~g--~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 265 (373)
T 3frk_A 188 LGSLG--DGGAVVTNDKDLAEKIKALSNYGSEKKYHHIYKGFNSRLDELQAGFLRVKLKYLDKWNEERRKIAQKYIAGIN 265 (373)
T ss_dssp SCCSS--SCEEEEESCHHHHHHHHHHHBTTCSBTTBCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHCC
T ss_pred cCccc--eeEEEEeCCHHHHHHHHHHHhcCcccCCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 95423 379999887777666655443221 1235555555444444444444444555555555444
Q ss_pred hCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccC----CC
Q 016612 270 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH----AS 345 (386)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~----~~ 345 (386)
+.+ +..+..... .......+.+...+ .+.+.+.|...|+.++.+......+.|..... ..
T Consensus 266 ~~~----~~~~~~~~~---------~~~~~~~~~~~~~~---~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~ 329 (373)
T 3frk_A 266 NPN----VIIPVEADY---------AKHVWYTFVIRSEK---RDELQKYLNNNGIGTLIHYPIPIHLQQAYKDLGFKTGN 329 (373)
T ss_dssp CTT----EECCCCCTT---------EECCCSSEEEEESS---HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTS
T ss_pred cCc----eEeccCCCC---------CceeeEEEEEEeCC---HHHHHHHHHHCCCCcccCcCCccccChHHHhcCCCCCC
Confidence 332 111111000 00111223444432 55677777777887776542222333322211 11
Q ss_pred CCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 346 IPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 346 ~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
++.... ...+.+|++++...+++.++.+.++|++.
T Consensus 330 ~~~~~~----~~~~~lrl~~~~~~t~~di~~~~~~l~~~ 364 (373)
T 3frk_A 330 FPIAEK----IANEILSIPIWYGMKNEEIEYVIDKINAW 364 (373)
T ss_dssp SHHHHH----HHHHEEEECCCTTCCHHHHHHHHHHHHTC
T ss_pred CHHHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHHH
Confidence 111111 01256999999888888888888888765
No 104
>2zyj_A Alpha-aminodipate aminotransferase; alpha-aminoadipate aminotransferase; HET: PGU; 1.67A {Thermus thermophilus} PDB: 2egy_A* 2dtv_A* 2zg5_A* 2zp7_A* 2z1y_A* 3cbf_A*
Probab=99.94 E-value=5e-26 Score=213.80 Aligned_cols=285 Identities=15% Similarity=0.167 Sum_probs=190.0
Q ss_pred HHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----CH
Q 016612 57 RDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DL 129 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~ 129 (386)
..++++.+++++|.+ +.+++++|++++. ++.+++++||+|++++|+|+++. ..++..|.+++.++.+ |+
T Consensus 76 ~~~l~~~la~~~g~~~~~v~~~~g~~~al~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~d~ 151 (397)
T 2zyj_A 76 YAPLRAFVAEWIGVRPEEVLITTGSQQALDLVGKVFLDEGSPVLLEAPSYMGAI----QAFRLQGPRFLTVPAGEEGPDL 151 (397)
T ss_dssp CHHHHHHHHHHHTSCGGGEEEESHHHHHHHHHHHHHCCTTCEEEEEESCCHHHH----HHHHTTCCEEEEEEEETTEECH
T ss_pred CHHHHHHHHHHhCCChhhEEEeccHHHHHHHHHHHhCCCCCEEEEeCCCcHHHH----HHHHHcCCEEEecCcCCCCCCH
Confidence 346666667766764 4555555568987 45557899999999999999886 4445678888888753 89
Q ss_pred HHHHhhhCC-CceEEE-EeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCC------CccE
Q 016612 130 DEVASAIGP-WTKLVW-VESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLEL------GADI 193 (386)
Q Consensus 130 ~~l~~~~~~-~~~~v~-~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~------~~di 193 (386)
+++++.+++ ++++|+ +++|+||||.+.+ +++|.++|+++|+++|+||+|+...+. +.... +.++
T Consensus 152 ~~l~~~l~~~~~~~v~~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~~~~~~~i 231 (397)
T 2zyj_A 152 DALEEVLKRERPRFLYLIPSFQNPTGGLTPLPARKRLLQMVMERGLVVVEDDAYRELYFGEARLPSLFELAREAGYPGVI 231 (397)
T ss_dssp HHHHHHHHHCCCSCEEECCBSCTTTCCBCCHHHHHHHHHHHHHHTCCEEEECTTTTCBCSSCCCCCHHHHHHHHTCCCEE
T ss_pred HHHHHHHhhcCCeEEEECCCCcCCCCCcCCHHHHHHHHHHHHHcCCEEEEeCCcccccCCCCCCCchhhhCcccCCCeEE
Confidence 999998874 788874 6899999999987 558999999999999999999864331 11112 3458
Q ss_pred EEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHHHHHHHHHHHH
Q 016612 194 VMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKIAEFL 268 (386)
Q Consensus 194 ~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l~~~l 268 (386)
++.|+||+++ +|+|+|+++++ +++.+.+.........+.+...+.++...++. +....+.+.++.+.+.+.+
T Consensus 232 ~~~s~sK~~~--~G~r~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~L 308 (397)
T 2zyj_A 232 YLGSFSKVLS--PGLRVAFAVAH-PEALQKLVQAKQGADLHTPMLNQMLVHELLKEGFSERLERVRRVYREKAQAMLHAL 308 (397)
T ss_dssp EEEESTTTTC--GGGCCEEEECC-HHHHHHHHHHHHHHHSSCCHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEeccccccc--ccceeEEEecC-HHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999995 57899999987 55665555443332233355555555444432 2223334445555566666
Q ss_pred hhC-CCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCC
Q 016612 269 ASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIP 347 (386)
Q Consensus 269 ~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~ 347 (386)
++. +. ++ .+. . +..+.++++.++......++.+.+...|+.+.+|..+..-
T Consensus 309 ~~~~~~-------g~------~~~--~-~~~g~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~f~~~------------ 360 (397)
T 2zyj_A 309 DREVPK-------EV------RYT--R-PKGGMFVWMELPKGLSAEGLFRRALEENVAFVPGGPFFAN------------ 360 (397)
T ss_dssp HHHSCT-------TS------EEC--C-CSBSSEEEEECSTTCCHHHHHHHHHHTTEEEEESGGGCTT------------
T ss_pred HHHCCC-------Ce------EEc--c-CCccEEEEEEcCCCCCHHHHHHHHHHCCCEEechHHhcCC------------
Confidence 542 20 11 111 0 1235677888754333566777777778887776542100
Q ss_pred HHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 348 VEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 348 ~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
+..++++|||++. +++++.++.|.+++++
T Consensus 361 -------~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 392 (397)
T 2zyj_A 361 -------GGGENTLRLSYATLDREGIAEGVRRLGRALKG 392 (397)
T ss_dssp -------SCCTTEEEEECSSSCHHHHHHHHHHHHHHHHH
T ss_pred -------CCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 1135789999974 5778888888887764
No 105
>3f9t_A TDC, L-tyrosine decarboxylase MFNA; NP_247014.1, L-tyrosine decarboxylase MFNA (EC 4.1.1.25), ST genomics; HET: PLP; 2.11A {Methanocaldococcus jannaschii}
Probab=99.94 E-value=1.5e-26 Score=216.92 Aligned_cols=274 Identities=15% Similarity=0.075 Sum_probs=186.2
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHHhcCC-------------CCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLLGT-------------GEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~~~~~-------------g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
+..+++++++++++|.+ +.+++++|++++. ++..++.+ ||+|++++|+|+++. ..++..|
T Consensus 69 ~~~~~l~~~la~~~~~~~~~i~~~~ggt~a~~~~~~~~~~~~~~~~~~~~~~~~gd~vl~~~~~~~~~~----~~~~~~g 144 (397)
T 3f9t_A 69 LLEEKAVALLGSLLNNKDAYGHIVSGGTEANLMALRCIKNIWREKRRKGLSKNEHPKIIVPITAHFSFE----KGREMMD 144 (397)
T ss_dssp HHHHHHHHHHHHHTTCTTCEEEEESCHHHHHHHHHHHHHHHHHHHHHTTCCCCSSCEEEEETTCCTHHH----HHHHHHT
T ss_pred HHHHHHHHHHHHHhCCCCCCEEEecCcHHHHHHHHHHHHHHHHhhhhhcccCCCCeEEEECCcchhHHH----HHHHHcC
Confidence 36788999999999886 4577788889986 44555554 999999999999986 4445668
Q ss_pred cEEEEeCCC-----CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc--------
Q 016612 119 VVVKRVNTC-----DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-------- 184 (386)
Q Consensus 119 ~~~~~v~~~-----d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-------- 184 (386)
.+++.++.+ |++++++.+++ ++++|++++|+||||.+.|+++|.++|+++|+++|+|++|+.+...
T Consensus 145 ~~~~~v~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~ 224 (397)
T 3f9t_A 145 LEYIYAPIKEDYTIDEKFVKDAVEDYDVDGIIGIAGTTELGTIDNIEELSKIAKENNIYIHVDAAFGGLVIPFLDDKYKK 224 (397)
T ss_dssp CEEEEECBCTTSSBCHHHHHHHHHHSCCCEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEECTTGGGTGGGCCGGGCC
T ss_pred ceeEEEeeCCCCcCCHHHHHHHHhhcCCeEEEEECCCCCCCCCCCHHHHHHHHHHhCCeEEEEccccchhhhhccccccc
Confidence 999999875 89999999987 8999999999999999999999999999999999999999754321
Q ss_pred -------CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhc---------CC--CCChhhHHHHHhc
Q 016612 185 -------RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE---------GS--GLAPFDCWICLRG 246 (386)
Q Consensus 185 -------~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~---------~~--~~~~~~~~~~~~~ 246 (386)
+... +.|+++.|+||+++++. ++|+++++++.+.+.+....... +. +.+....++.+..
T Consensus 225 ~~~~~~~~~~~-~~~~~~~s~~K~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~ 301 (397)
T 3f9t_A 225 KGVNYKFDFSL-GVDSITIDPHKMGHCPI--PSGGILFKDIGYKRYLDVDAPYLTETRQATILGTRVGFGGACTYAVLRY 301 (397)
T ss_dssp TTCCCCCSGGG-TCSEEECCTTTTTCCCS--SCEEEEESSGGGGGGTCEECTTSSSSEECSSCSSCCSHHHHHHHHHHHH
T ss_pred ccccccccccc-cCCeEEEccccccCCCC--CceEEEEeCHHHHHhhccCCccccCCCccccccccccchHHHHHHHHHH
Confidence 1122 78999999999986543 57888887765544321111110 11 1122223332222
Q ss_pred C--CcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCccee
Q 016612 247 V--KTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSI 324 (386)
Q Consensus 247 ~--~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi 324 (386)
+ ..+....++..++.+.+.+.|++.. +... . ...++++++.+.+ ...+.+.+...|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~l~~~L~~~g---------~~~~------~---~~~~~~~~~~~~~---~~~~~~~l~~~gi 360 (397)
T 3f9t_A 302 LGREGQRKIVNECMENTLYLYKKLKENN---------FKPV------I---EPILNIVAIEDED---YKEVCKKLRDRGI 360 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CCBS------S---CCSSSEEEEECTT---HHHHHHHHHHTTC
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHCC---------CEEE------c---CCCccEEEEEeCC---HHHHHHHHHhCCe
Confidence 2 1223444555566666666666541 1100 0 1246788888765 4456666666677
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
.+++|.. ++++||+++. ++++++++.|+++++
T Consensus 361 ~v~~~~~--------------------------~~~~Ri~~~~~~~~e~i~~~~~~l~~~l~ 396 (397)
T 3f9t_A 361 YVSVCNC--------------------------VKALRIVVMPHIKREHIDNFIEILNSIKR 396 (397)
T ss_dssp BCEECSS--------------------------SSEEEEECCTTCCHHHHHHHHHHHHHHC-
T ss_pred EEeccCC--------------------------CCEEEEEEcCCCCHHHHHHHHHHHHHhhC
Confidence 6665442 4669999985 555566666665553
No 106
>2aeu_A Hypothetical protein MJ0158; selenocysteine synthase, PLP, pyridoxal phosphate, HOMO- oligomerization, unknown function; 1.70A {Methanocaldococcus jannaschii} SCOP: c.67.1.8 PDB: 2aev_A*
Probab=99.94 E-value=3e-26 Score=213.41 Aligned_cols=287 Identities=18% Similarity=0.195 Sum_probs=188.9
Q ss_pred hHHHHHHHHHhhcCC---CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHH
Q 016612 56 TRDALESLLAKLDKA---DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEV 132 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l 132 (386)
..+++++.+++++|. ++.+++++|++++..++..+ +||+|++++|.|+++...+. .++..|.+++.+ .|++++
T Consensus 59 ~~~~~~~~~a~~~g~~~~~~~~~~~ggt~a~~~~~~~~-~gd~Vl~~~~~y~~~~~~~~-~~~~~g~~~~~v--~d~~~l 134 (374)
T 2aeu_A 59 FAEKVNEYGLKHLGGDENDKCVGFNRTSSAILATILAL-KPKKVIHYLPELPGHPSIER-SCKIVNAKYFES--DKVGEI 134 (374)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHH-CCSEEEEECSSSSCCTHHHH-HHHHTTCEEEEE--SCHHHH
T ss_pred HHHHHHHHHHHHhCCCCcceEEEEcChHHHHHHHHHhC-CCCEEEEecCCCCccHHHHH-HHHHcCcEEEEe--CCHHHH
Confidence 456778888888898 57788888999987554445 99999999999988655443 566789999888 699999
Q ss_pred HhhhCCCceE-EEEeCCCCCCc-ccccHHHHHHHHHHcCCEEEEeCCCCCCC---ccC--CCCCCccEEEeccccccccC
Q 016612 133 ASAIGPWTKL-VWVESPTNPRQ-QICDIRKIAEMAHAHGALLLVDNSIMSPV---LSR--PLELGADIVMHSATKFIAGH 205 (386)
Q Consensus 133 ~~~~~~~~~~-v~~~~~~nptG-~~~~l~~i~~la~~~~~~li~D~a~~~~~---~~~--~~~~~~di~~~S~sK~~~g~ 205 (386)
++. ++++++ |++++|+|||| ...++++|.++|+++|+++|+|++|+... ... +...+.|++++|+||+++|
T Consensus 135 ~~~-~~~~~~~v~~~~p~nptG~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~di~~~S~sK~l~g- 212 (374)
T 2aeu_A 135 LNK-IDKDTLVIITGSTMDLKVIELENFKKVINTAKNKEAIVFVDDASGARVRLLFNQPPALKLGADLVVTSTDKLMEG- 212 (374)
T ss_dssp HTT-CCTTEEEEEECBCTTSCBCCHHHHHHHHHHHHHHTCCEEEECTTHHHHHHHTTCCCHHHHTCSEEEEETTSSSSS-
T ss_pred Hhc-CCCccEEEEEccCCCCCCCCcccHHHHHHHHHHcCCEEEEECCcccccccccccCCccccCCcEEEecCcccccC-
Confidence 988 888999 99999999999 78899999999999999999999986542 111 2335789999999999865
Q ss_pred CCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH-HHHHHHHHHHHH----HHHHhhCCCcceEecC
Q 016612 206 SDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL-RVEKQQDNAQKI----AEFLASHPRVKKVNYA 280 (386)
Q Consensus 206 ~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l----~~~l~~~~~~~~~~~~ 280 (386)
+|+|+++++ +++.+.+.......+...++..++++..+++.+.. +.++..++.+.+ .+.+.+.- +
T Consensus 213 --~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L-------~ 282 (374)
T 2aeu_A 213 --PRGGLLAGK-KELVDKIYIEGTKFGLEAQPPLLAGIYRALKNFNLERIRKAFERAKNFDLSKIEKLNKEL-------K 282 (374)
T ss_dssp --CSCEEEEEE-HHHHHHHHHHHHTTTCBCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCHHHHHHHHHH-------T
T ss_pred --cceEEEEEC-HHHHHHHHHhhccccCCCCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhh-------h
Confidence 368999887 45666666555544555666666655554432212 344555555555 34443310 1
Q ss_pred CCCCCCchhhhhhccCCCCceEEEE-eCCH-H--hHHHHH-hhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 281 GLPEHPGHELHYSQAKGAGSVLSFL-TGSL-A--LSKHVV-ETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 281 ~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~-~--~~~~l~-~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
.+...++..+. +...+.++.+. .... . ...++. +.+...|+.+.+|..+ |
T Consensus 283 ~~~~~~g~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~ll~~~gV~v~~g~~~-----~----------------- 337 (374)
T 2aeu_A 283 AIDDNINIVYE---RTPTGFVIKRVYKDDTINIKKLIEIGFNLLKNYGIITITVAGM-----P----------------- 337 (374)
T ss_dssp TTCTTEEEEEE---ECSSEEEEEEEESSHHHHHHHHHHHHHHHHHHHCEECSTTSSS-----C-----------------
T ss_pred hhhhccCccee---eCCceEEEEeecccccccccchHHHHHHHHHhCCEEEecCCCC-----C-----------------
Confidence 11100121111 12234444443 2211 1 011133 3344568877776431 1
Q ss_pred CCCCeEEEEecc-----CChHHHHHHHHHHHhc
Q 016612 356 LTEDLVRISVGI-----EDVNDLISDLDKALRT 383 (386)
Q Consensus 356 ~~~~~iRis~~~-----~~~~~~i~~l~~~l~~ 383 (386)
..++++||+++. .+++.+++.++++|++
T Consensus 338 ~~~~~lRi~~~~~~~~~~~l~~l~~~l~~~l~~ 370 (374)
T 2aeu_A 338 GASKSLRIDLTSRDAERIDDNYIIKAIVESIKM 370 (374)
T ss_dssp SSCCSEEEETTSGGGGGSCHHHHHHHHHHHHHH
T ss_pred CCCCeEEEEcCCchHHHHHHHHHHHHHHHHHHH
Confidence 124579999973 3467778888777765
No 107
>3rq1_A Aminotransferase class I and II; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta structure, cytosol; HET: AKG GOL; 2.20A {Veillonella parvula}
Probab=99.94 E-value=8.2e-26 Score=213.78 Aligned_cols=285 Identities=17% Similarity=0.161 Sum_probs=189.5
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
....|.+. |.+ +++++.+++....+.+ +.+++++|++++. ++.+++++||+|++++|+|+++. ..++..|
T Consensus 72 ~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~l~~~gd~Vl~~~p~~~~~~----~~~~~~g 147 (418)
T 3rq1_A 72 EHVGYAPIAGIPDFLCAAEKECFGNFRPEGHIRSIATAGGTGGIHHLIHNYTEPGDEVLTADWYWGAYR----VICSDTG 147 (418)
T ss_dssp HHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHSCTTCEEEEESSCCTHHH----HHHHHTT
T ss_pred ccCCCCCCCChHHHHHHHHHHHhcccCccccccEEECCchHHHHHHHHHHhcCCCCEEEECCCCchhHH----HHHHHcC
Confidence 34567776 776 7888888888777777 6677777789987 55668899999999999999886 4556789
Q ss_pred cEEEEeCCC------CHHHHHhhhCC----Cce-EEEEeCC-CCCCcccccH---HHHHHHHH------HcCCEEEEeCC
Q 016612 119 VVVKRVNTC------DLDEVASAIGP----WTK-LVWVESP-TNPRQQICDI---RKIAEMAH------AHGALLLVDNS 177 (386)
Q Consensus 119 ~~~~~v~~~------d~~~l~~~~~~----~~~-~v~~~~~-~nptG~~~~l---~~i~~la~------~~~~~li~D~a 177 (386)
.+++.++.. |++++++.+++ +++ ++++++| +||||.+.+. ++|+++|+ ++|+++|+||+
T Consensus 148 ~~~~~v~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~ 227 (418)
T 3rq1_A 148 RTLVTYSLFDEHNNFNHEAFQNRVNELAAKQTNVVVIFNTPGNNPTGYSIEDKDWDSILNFLKDLVAIGRNNVIIGIDVA 227 (418)
T ss_dssp CEEEEECSBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHHHTSSCEEEEEEECT
T ss_pred CEEEEEeeeCCCCCcCHHHHHHHHHHhhccCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHhhhccCCCeEEEEecc
Confidence 999998852 78999988874 666 8888999 9999999974 55666666 89999999999
Q ss_pred CCCCCcc---------CCCCCCc---cEEEeccccccccCCCceEEEEEE--cChhHHHHHHHhhhh----cCCCCChhh
Q 016612 178 IMSPVLS---------RPLELGA---DIVMHSATKFIAGHSDVMAGVLAV--KGERLAKELYFLQNA----EGSGLAPFD 239 (386)
Q Consensus 178 ~~~~~~~---------~~~~~~~---di~~~S~sK~~~g~~g~~~G~i~~--~~~~~~~~~~~~~~~----~~~~~~~~~ 239 (386)
|...... ....... .++++|+||.+ |.+|+|+||+++ +++++.+.+...... .....+...
T Consensus 228 y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (418)
T 3rq1_A 228 YLDYSGEKDEVRAFFNKFSHLPKEILTCVCYSLSKGF-TMYGQRVGAMIGISDDEEIADEFFEVNKSTSRATWSNICRPA 306 (418)
T ss_dssp TGGGSSCHHHHHGGGGGGTTCCTTEEEEEEEESTTTT-TCCSSCCEEEEEEESSHHHHHHHHHHHHHHHHHHTSSCCHHH
T ss_pred cccccCChHHHHHHHHHHHhcCCCceEEEEEeCCCCC-cCcCCcceEEEEEeCCHHHHHHHHHHHHHHHhhccCCCchHH
Confidence 8532211 0111122 38889999999 556899999998 245666555443321 123455555
Q ss_pred HHHHHhcCCcHH----------HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCC
Q 016612 240 CWICLRGVKTMA----------LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS 308 (386)
Q Consensus 240 ~~~~~~~~~~~~----------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~ 308 (386)
+.++...++... ...+.+.++.+.+.+.+++. +++.. ...++ ++++.+.+
T Consensus 307 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~---------g~~~~----------~~~~~~~~~~~~~~ 367 (418)
T 3rq1_A 307 MRTMANIVADPAKFKEYEAERNCYYQLIRDRADIFKQEAAQV---------GLPML----------PYRGGFFITIPTDS 367 (418)
T ss_dssp HHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------TCCCC----------CCCSSSEEEEECTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---------CCCCC----------CCCceEEEEcCCCC
Confidence 555555444321 11223334444444444432 12111 11234 44444533
Q ss_pred HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhcC
Q 016612 309 LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 309 ~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~~ 384 (386)
..++.+.+...|+.+.+| ++++|||++ .++++++++.|++++++.
T Consensus 368 ---~~~~~~~l~~~gi~v~~g----------------------------~~~iRis~~~~~~~~i~~~~~~l~~~l~~~ 415 (418)
T 3rq1_A 368 ---ANAICEELKKEHIYVIAL----------------------------ANGIRIAACGIPKCQMTGLAEKIYNAMKSL 415 (418)
T ss_dssp ---HHHHHHHHHHTTEECEEC----------------------------SSEEEEEGGGSCHHHHTTHHHHHHHHHHHT
T ss_pred ---HHHHHHHHHhCCEEEecC----------------------------CCCeEEEEecCCHHHHHHHHHHHHHHHHHH
Confidence 345556666678876654 234999986 488888999999998765
No 108
>3f0h_A Aminotransferase; RER070207000802, structural genomics, JOIN for structural genomics, JCSG; HET: MSE LLP; 1.70A {Eubacterium rectale}
Probab=99.94 E-value=7.7e-26 Score=210.83 Aligned_cols=166 Identities=13% Similarity=0.104 Sum_probs=131.8
Q ss_pred chHHHHHHHHHhhcCCC---ceEE-eCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 55 PTRDALESLLAKLDKAD---RALC-FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~---~~i~-~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
+.++++++++++++|.+ +.++ ++||++++. ++.+++++||+|++++|.|.+.. +...+...|.+++.++.+
T Consensus 52 ~~~~~~~~~la~~~g~~~~~~~i~~~~ggt~al~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 129 (376)
T 3f0h_A 52 STMLENEKFMLEYAKAPEGSKAVFMTCSSTGSMEAVVMNCFTKKDKVLVIDGGSFGHR--FVQLCEIHEIPYVALKLEHG 129 (376)
T ss_dssp HHHHHHHHHHHHHHTCCTTCEEEEESSCHHHHHHHHHHHHCCTTCCEEEEESSHHHHH--HHHHHHHTTCCEEEEECCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCChhHHHHHHHHhccCCCCeEEEEeCChhhHH--HHHHHHHcCCceEEEeCCCC
Confidence 46888999999999876 3455 456689987 55667899999999998776643 224556678888877653
Q ss_pred ---CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccccc
Q 016612 128 ---DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 ---d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~~ 203 (386)
|++++++.++++++++++++|+||||.+.|+++|.++|+++|+++|+|++++.+... +....+.|++++|+||+++
T Consensus 130 ~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~~~~~~~~~~~~~~~~~d~~~~s~~K~l~ 209 (376)
T 3f0h_A 130 KKLTKEKLYEYDNQNFTGLLVNVDETSTAVLYDTMMIGEFCKKNNMFFVCDCVSAFLADPFNMNECGADVMITGSQKVLA 209 (376)
T ss_dssp CCCCHHHHHTTTTSCCCEEEEESEETTTTEECCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCSEEEEETTTTTC
T ss_pred CCCCHHHHHHhhccCceEEEEecccCCcceecCHHHHHHHHHHcCCEEEEEcCccccCccccccccCccEEEecCccccc
Confidence 899999988889999999999999999999999999999999999999999876543 2223468999999999998
Q ss_pred cCCCceEEEEEEcChhHHHHHH
Q 016612 204 GHSDVMAGVLAVKGERLAKELY 225 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~ 225 (386)
++.| +|++++++ .+.+.+.
T Consensus 210 ~~~G--~g~~~~~~-~~~~~~~ 228 (376)
T 3f0h_A 210 CPPG--ISVIVLAP-RGVERVE 228 (376)
T ss_dssp CCSS--CEEEEECH-HHHHHHH
T ss_pred CCCc--eEEEEECH-HHHHHhh
Confidence 6777 57787764 4544443
No 109
>3nyt_A Aminotransferase WBPE; PLP binding, nucleotide-sugar binding; HET: ULP; 1.30A {Pseudomonas aeruginosa} PDB: 3nys_A* 3nyu_A* 3nu8_A* 3nu7_A* 3nub_A*
Probab=99.94 E-value=3.5e-25 Score=205.88 Aligned_cols=301 Identities=17% Similarity=0.149 Sum_probs=211.6
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+...++++.+++++|.++.+++++||+|+. ++.++ +++||+|+++.++|+++.. .++..|.+++.++.+
T Consensus 34 ~~~~~~l~~~la~~~~~~~~~~~~sGt~al~~al~~~~~~~gd~Vi~~~~~~~~~~~----~~~~~G~~~~~~~~~~~~~ 109 (367)
T 3nyt_A 34 GPEVTELEDRLADFVGAKYCISCANGTDALQIVQMALGVGPGDEVITPGFTYVATAE----TVALLGAKPVYVDIDPRTY 109 (367)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHH----HHHHcCCEEEEEecCCccC
Confidence 3578899999999999999999999999987 45556 7899999999999999864 445678999988754
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCc--cEEEecc--ccc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHSA--TKF 201 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~--di~~~S~--sK~ 201 (386)
|++++++++++++++|+ ++||+|...++++|.++|+++|+++|+|++|+.+...+....+. |++++|| +|+
T Consensus 110 ~~d~~~l~~~i~~~~~~v~---~~~~~G~~~~~~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~Sf~~~K~ 186 (367)
T 3nyt_A 110 NLDPQLLEAAITPRTKAII---PVSLYGQCADFDAINAIASKYGIPVIEDAAQSFGASYKGKRSCNLSTVACTSFFPSAP 186 (367)
T ss_dssp SBCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCCBEEECTTTTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred CcCHHHHHHhcCcCCcEEE---eeCCccChhhHHHHHHHHHHcCCEEEEECccccCCeECCeeccCCCCEEEEECCCCCc
Confidence 88999999999999988 88899999999999999999999999999998766433322333 9999996 899
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhh------------cCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHh
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNA------------EGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLA 269 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 269 (386)
++++ |. +|+++++++.+.+.+...... ....+++..+++....++.+....++..++.+.+.+.++
T Consensus 187 l~~~-g~-gg~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~~~~~~~~~~~~~~~~~~~L~ 264 (367)
T 3nyt_A 187 LGCY-GD-GGAIFTNDDELATAIRQIARHGQDRRYHHIRVGVNSRLDTLQAAILLPKLEIFEEEIALRQKVAAEYDLSLK 264 (367)
T ss_dssp SCCS-SC-CEEEEESCHHHHHHHHHHTBTTEEETTEECSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCc-Cc-eeEEEeCCHHHHHHHHHHHhcCCCcCceeeccCcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 9543 33 899998877777766654432 124466677776666666666666677777777778777
Q ss_pred hCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccc-cCCCCCH
Q 016612 270 SHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM-SHASIPV 348 (386)
Q Consensus 270 ~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~-~~~~~~~ 348 (386)
+.+ + ..+.... + ......++.+.+++ .+.+.+.+...|+.++.+........|.+. ....++.
T Consensus 265 ~~~-~---~~~~~~~--~-------~~~~~~~~~~~~~~---~~~l~~~L~~~GI~~~~~~~~~~~~~~~~~~~~~~~~~ 328 (367)
T 3nyt_A 265 QVG-I---GTPFIEV--N-------NISVYAQYTVRMDN---RESVQASLKAAGVPTAVHYPIPLNKQPAVADEKAKLPV 328 (367)
T ss_dssp HTT-C---CCCCCCT--T-------EECCCSSEEEECSS---HHHHHHHHHHHTCCCBCSCSSCGGGSGGGCCTTCCCHH
T ss_pred cCC-e---eccCCCC--C-------CceeeEEEEEEeCC---HHHHHHHHHHCCCceeccCCCccccChhhhccCCCChH
Confidence 653 1 1111100 0 00112334555543 556777777778877665432333333332 2222322
Q ss_pred HHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 349 EVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 349 ~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
.... ....+|++++....++.++.+.+++++
T Consensus 329 ~~~~----~~~~l~lp~~~~~t~~~i~~v~~~~~~ 359 (367)
T 3nyt_A 329 GDKA----ATQVMSLPMHPYLDTASIKIICAALTN 359 (367)
T ss_dssp HHHH----HHHEEEECCCTTCCHHHHHHHHHHHHC
T ss_pred HHHH----HhCeEEccCCCCCCHHHHHHHHHHHHH
Confidence 2111 135599999988888888888888765
No 110
>2yrr_A Aminotransferase, class V; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; HET: PLP; 1.86A {Thermus thermophilus} PDB: 2yri_A*
Probab=99.94 E-value=2.1e-26 Score=212.50 Aligned_cols=283 Identities=15% Similarity=0.115 Sum_probs=189.9
Q ss_pred hHHHHHHHHHhhcCCC---ceE-EeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-----
Q 016612 56 TRDALESLLAKLDKAD---RAL-CFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i-~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----- 126 (386)
...++++++++++|.+ +.+ ++++|++++..++..+.+ |+|+++++.|+++ .+...++..|.+++.++.
T Consensus 34 ~~~~l~~~la~~~g~~~~~~~v~~t~g~t~a~~~~~~~~~~-d~vl~~~~~~~~~--~~~~~~~~~g~~~~~v~~~~~~~ 110 (353)
T 2yrr_A 34 VNRAIQERLAALFDPGEGALVAALAGSGSLGMEAGLANLDR-GPVLVLVNGAFSQ--RVAEMAALHGLDPEVLDFPPGEP 110 (353)
T ss_dssp HHHHHHHHHHHHHCCCTTCEEEEESSCHHHHHHHHHHTCSC-CCEEEEECSHHHH--HHHHHHHHTTCCEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhCCCCCCceEEEcCCcHHHHHHHHHHhcC-CcEEEEcCCCchH--HHHHHHHHcCCceEEEeCCCCCC
Confidence 5789999999999874 444 455667999865554333 8999999999876 233556678888888886
Q ss_pred CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC-CCCCccEEEecccccccc
Q 016612 127 CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATKFIAG 204 (386)
Q Consensus 127 ~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-~~~~~di~~~S~sK~~~g 204 (386)
.|++++++.+++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+..... ...+.|++++|++|++++
T Consensus 111 ~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~~~s~~K~~~~ 190 (353)
T 2yrr_A 111 VDPEAVARALKRRRYRMVALVHGETSTGVLNPAEAIGALAKEAGALFFLDAVTTLGMLPFSMRAMGVDYAFTGSQKCLSA 190 (353)
T ss_dssp CCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEECCTTSTTCC
T ss_pred CCHHHHHHHHHhCCCCEEEEEccCCCcceecCHHHHHHHHHHcCCeEEEEcCcccccccccccccCceEEEecCcccccC
Confidence 388999999887 899999999999999999999999999999999999999976654311 223679999999998877
Q ss_pred CCCceEEEEEEcChhHHHHHH-------------H-h-hhhcCCCCChhhHHHHHhcCCc-----HHHHHHHHHHHHHHH
Q 016612 205 HSDVMAGVLAVKGERLAKELY-------------F-L-QNAEGSGLAPFDCWICLRGVKT-----MALRVEKQQDNAQKI 264 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~-------------~-~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~l 264 (386)
+.| +|+++++++ +.+.+. . . ........+.....++..+++. +....++..++.+.+
T Consensus 191 ~~g--~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l 267 (353)
T 2yrr_A 191 PPG--LAPIAASLE-ARKAFTGKRGWYLDLARVAEHWERGGYHHTTPVLLHYALLEALDLVLEEGVAARERRAREVYAWV 267 (353)
T ss_dssp CSS--CEEEEECHH-HHHHCCCCSCSTTCHHHHHHHHTTCCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred CCc--eEEEEECHH-HHHHhccCCCccccHHHHhhhhhcCCCCCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 777 599998754 433322 0 0 0111122333333333233322 233344555666666
Q ss_pred HHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCC
Q 016612 265 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHA 344 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~ 344 (386)
.+.+++. .+ .++. .....+.++++.++......++.+.+...|+.+.+|..+.
T Consensus 268 ~~~L~~~-g~--------------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~----------- 320 (353)
T 2yrr_A 268 LEELKAR-GF--------------RPYP-KASPLPTVLVVRPPEGVDADRLVRALYAEGVAVAGGIGPT----------- 320 (353)
T ss_dssp HHHHHHT-TC--------------EESC-SSSBCTTEEEEECCTTCCHHHHHHHHHHTTEECEECCGGG-----------
T ss_pred HHHHHHC-CC--------------cccc-CccCCCeEEEEECCCCCCHHHHHHHHHHCCEEEeCCcccc-----------
Confidence 6666653 11 1110 0011345667877533335677777777788777665310
Q ss_pred CCCHHHHHhcCCCCCeEEEEec----cCChH-HHHHHHHHHHhc
Q 016612 345 SIPVEVRQARGLTEDLVRISVG----IEDVN-DLISDLDKALRT 383 (386)
Q Consensus 345 ~~~~~~~~~~~~~~~~iRis~~----~~~~~-~~i~~l~~~l~~ 383 (386)
.++++|+|++ .++++ ++++.|+++++.
T Consensus 321 ------------~~~~iRi~~~~~~~~~~~~~~~~~~l~~~l~~ 352 (353)
T 2yrr_A 321 ------------RGQVLRLGLMGEGARREAYQAFLKALDRALAL 352 (353)
T ss_dssp ------------TTTCEEEECSGGGSCHHHHHHHHHHHHHHHHC
T ss_pred ------------CCCeEEEecCccCCHHHHHHHHHHHHHHHHhh
Confidence 2466999983 46677 888888888764
No 111
>2bkw_A Alanine-glyoxylate aminotransferase 1; analine-glyoxylate aminotransferase, pyridoxal-5-phosphate, SAD, glycolate pathway; HET: LLP; 2.57A {Saccharomyces cerevisiae} SCOP: c.67.1.3
Probab=99.94 E-value=1.4e-25 Score=209.73 Aligned_cols=284 Identities=12% Similarity=0.110 Sum_probs=186.7
Q ss_pred hHHHHHHHHHhhcCC------CceEEeCcHHHHHHHH-HHhc---CCCCEEEecCC-CCCcHHHHHhhhcccCCcEEEEe
Q 016612 56 TRDALESLLAKLDKA------DRALCFTSGMAALAAV-THLL---GTGEEIVAGDD-LYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~------~~~i~~~~gt~al~~~-~~~~---~~g~~Vlv~~~-~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
...++++.++++++. ++.++++||++++.++ .++. ++||+|+++++ .|+.+. ...++..|.+++.+
T Consensus 39 ~~~~~~~~l~~~~~~~~~~~~~~v~~~~g~t~al~~~~~~~~~~~~~gd~vlv~~~~~~~~~~---~~~~~~~g~~~~~v 115 (385)
T 2bkw_A 39 IFQRVLKNTRAVFKSAAASKSQPFVLAGSGTLGWDIFASNFILSKAPNKNVLVVSTGTFSDRF---ADCLRSYGAQVDVV 115 (385)
T ss_dssp HHHHHHHHHHHHTTCCGGGTCEEEEEESCTTHHHHHHHHHHSCTTCSCCEEEEECSSHHHHHH---HHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCCceEEEcCchHHHHHHHHHHHhccCCCCCeEEEEcCCcchHHH---HHHHHHcCCceEEE
Confidence 355677777777665 2455666778998754 5565 89999988754 444332 24456778999998
Q ss_pred CC------CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHc--CCEEEEeCCCCCCCcc-CCCCCCccEE
Q 016612 125 NT------CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAH--GALLLVDNSIMSPVLS-RPLELGADIV 194 (386)
Q Consensus 125 ~~------~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~--~~~li~D~a~~~~~~~-~~~~~~~di~ 194 (386)
+. .|++++++++++ ++++|++++++||||.+.|+++|.++|+++ |+++|+|++|+.+... +....++|++
T Consensus 116 ~~~~~~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~l~~i~~~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~d~~ 195 (385)
T 2bkw_A 116 RPLKIGESVPLELITEKLSQNSYGAVTVTHVDTSTAVLSDLKAISQAIKQTSPETFFVVDAVCSIGCEEFEFDEWGVDFA 195 (385)
T ss_dssp CCSSTTSCCCHHHHHHHHHHSCCSEEEEESEETTTTEECCHHHHHHHHHHHCTTSEEEEECTTTTTTSCCCTTTTTCSEE
T ss_pred ecCCCCCCCCHHHHHHHHhcCCCCEEEEEccCCCcCeEcCHHHHHHHHHhhCCCCEEEEECccccCCccccccccCceEE
Confidence 87 389999999875 899999999999999999999999999999 9999999999876543 2334578999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHH------------------HHh--hhhcC-----CCCChhhHHHHHhcCCc
Q 016612 195 MHSATKFIAGHSDVMAGVLAVKGERLAKEL------------------YFL--QNAEG-----SGLAPFDCWICLRGVKT 249 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~------------------~~~--~~~~~-----~~~~~~~~~~~~~~~~~ 249 (386)
++|+||+++|+.| .|+++++++.+.+.+ ... ....+ ...+......+..+++.
T Consensus 196 ~~s~~K~~~~~~G--~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~ 273 (385)
T 2bkw_A 196 LTASQKAIGAPAG--LSISLCSSRFMDYALNDSKNGHVHGYFSSLRRWTPIMENYEAGKGAYFATPPVQLINSLDVALKE 273 (385)
T ss_dssp EEESSSTTCCCSC--EEEEEECHHHHHHHTCHHHHCCCSCSTTCHHHHHHHHHHHHTTCCCCSSCCCHHHHHHHHHHHHH
T ss_pred EecCccccccCCc--ceEEEEcHHHHHHHHhhccCCCCCceeecHHHHhhHHHhhhccCCCCCCCCCHHHHHHHHHHHHH
Confidence 9999998887777 489988755433122 110 11111 12333333333333322
Q ss_pred -----HHHHHHHHHHHHHHHHHHH-hhCCCcceEecCCCCCCCchhhhhhcc-C-CCCceEEEEeCCHHhHHHHHhhcCc
Q 016612 250 -----MALRVEKQQDNAQKIAEFL-ASHPRVKKVNYAGLPEHPGHELHYSQA-K-GAGSVLSFLTGSLALSKHVVETTKY 321 (386)
Q Consensus 250 -----~~~~~~~~~~~~~~l~~~l-~~~~~~~~~~~~~l~~~~~~~i~~~~~-~-~~~~~~~~~~~~~~~~~~l~~~l~~ 321 (386)
+....++..++.+.+.+.+ ++. .+ .++...+ . ..+.++++.+++ ..++.+.+..
T Consensus 274 ~~~~~~~~~~~~~~~~~~~l~~~L~~~~-g~--------------~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~ 335 (385)
T 2bkw_A 274 ILEEGLHKRWDLHREMSDWFKDSLVNGL-QL--------------TSVSRYPSNMSAHGLTAVYVAD---PPDVIAFLKS 335 (385)
T ss_dssp HHHHCHHHHHHHHHHHHHHHHHHHHTTT-CC--------------EESSCSSSTTBCSSCEEEECSC---HHHHHHHHHH
T ss_pred HHHccHHHHHHHHHHHHHHHHHHHHHhc-Cc--------------eecccCcccccCCceEEEecCC---HHHHHHHHHH
Confidence 2233444555556666666 432 11 1110000 1 246788888865 4567777767
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEE-ec-------cCChHHHHHHHHHHHhcC
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRIS-VG-------IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis-~~-------~~~~~~~i~~l~~~l~~~ 384 (386)
.|+.+++|.... ..++++||| ++ .++++++++.|+++++++
T Consensus 336 ~gi~v~~g~~~~----------------------~~~~~iRis~~~~~~~~~~~e~i~~~~~~l~~~~~~~ 384 (385)
T 2bkw_A 336 HGVVIAGGIHKD----------------------IGPKYIRIGHMGVTACNKNLPYMKNCFDLIKLALQRK 384 (385)
T ss_dssp TTEECBCCCCTT----------------------TGGGEEEECCCGGGTSSTTCTHHHHHHHHHHHHTTC-
T ss_pred CCeEEeCCCCcc----------------------cCCCEEEEEccccccccCCHHHHHHHHHHHHHHHHhc
Confidence 788877664310 124679999 54 478889999999888764
No 112
>2bwn_A 5-aminolevulinate synthase; tetrapyrrole biosynthesis, heme biosynthesis, pyridoxal PHOS dependent, transferase, acyltransferase; HET: LLP; 2.1A {Rhodobacter capsulatus} SCOP: c.67.1.4 PDB: 2bwo_A* 2bwp_A*
Probab=99.94 E-value=4.6e-25 Score=207.50 Aligned_cols=281 Identities=18% Similarity=0.171 Sum_probs=191.3
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-h--cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHH
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTH-L--LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDE 131 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~--~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~ 131 (386)
+...++++.+++++|.++.+++++|++++.+++. + +.+||.|+++.|.|+++...+ +..|.+++.++.+|+++
T Consensus 91 ~~~~~l~~~la~~~~~~~~i~~~sG~~a~~~~~~~l~~~~~gd~Vl~~~~~~~~~~~~~----~~~g~~~~~v~~~d~~~ 166 (401)
T 2bwn_A 91 AYHRRLEAEIAGLHQKEAALVFSSAYNANDATLSTLRVLFPGLIIYSDSLNHASMIEGI----KRNAGPKRIFRHNDVAH 166 (401)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHHHHHSTTCEEEEETTCCHHHHHHH----HHSCCCEEEECTTCHHH
T ss_pred HHHHHHHHHHHHHhCCCcEEEECCcHHHHHHHHHHHhcCCCCCEEEECchhhHHHHHHH----HHcCCeEEEEcCCCHHH
Confidence 3788999999999998888999999886554433 3 369999999999999886443 45789999999889999
Q ss_pred HHhhhC----CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC-------CC--CCccEEEecc
Q 016612 132 VASAIG----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-------LE--LGADIVMHSA 198 (386)
Q Consensus 132 l~~~~~----~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-------~~--~~~di~~~S~ 198 (386)
+++.++ +++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.+... .. ...|+++.|+
T Consensus 167 le~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~g~~~~~~~~~~~~~~i~~~s~ 246 (401)
T 2bwn_A 167 LRELIAADDPAAPKLIAFESVYSMDGDFGPIKEICDIAEEFGALTYIDEVHAVGMYGPRGAGVAERDGLMHRIDIFNGTL 246 (401)
T ss_dssp HHHHHHHSCTTSCEEEEEESBCTTTCCBCCHHHHHHHHHHHTCEEEEECTTTTTTSSTTSCCHHHHHTCGGGCSEEEEES
T ss_pred HHHHHHhhccCCceEEEEecCcCCCCCcCCHHHHHHHHHHcCCEEEEeccccccccCCCCceeeeccCccccCcEEEeec
Confidence 998876 5899999999999999999999999999999999999999985543210 11 1358999999
Q ss_pred ccccccCCCceEEEEEEcChhHHHHHHHhhh--hcCCCCChhhHHHHHhcCC---cH--HHHHHHHHHHHHHHHHHHhhC
Q 016612 199 TKFIAGHSDVMAGVLAVKGERLAKELYFLQN--AEGSGLAPFDCWICLRGVK---TM--ALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 199 sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~l~~~l~~~ 271 (386)
||+++++ +|+++++ +.+.+.+..... ....+.++..+.++..+++ .. ....++..++.+.+.+.|++.
T Consensus 247 sK~~~~~----GG~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 321 (401)
T 2bwn_A 247 AKAYGVF----GGYIAAS-ARMVDAVRSYAPGFIFSTSLPPAIAAGAQASIAFLKTAEGQKLRDAQQMHAKVLKMRLKAL 321 (401)
T ss_dssp SSTTCSC----CEEEEEC-HHHHHHHHHHCHHHHTSBCCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhccCC----CCEEecC-HHHHHHHHHhCcCceecCCCCHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHC
Confidence 9999643 3888876 555554443221 1222334444433333332 22 334455556666666666543
Q ss_pred CCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccccccccccccCCCCCHHH
Q 016612 272 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSHASIPVEV 350 (386)
Q Consensus 272 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~ 350 (386)
++. ++ ...++++++.+++......+.+.+. ..|+.+.++.... .|
T Consensus 322 ---------g~~------~~----~~~~~~~~~~~~~~~~~~~~~~~L~~~~gi~v~~~~~~~---~~------------ 367 (401)
T 2bwn_A 322 ---------GMP------II----DHGSHIVPVVIGDPVHTKAVSDMLLSDYGVYVQPINFPT---VP------------ 367 (401)
T ss_dssp ---------TCC------BC----CCSSSCEEEECCCHHHHHHHHHHHHHHHCEECCEECTTT---SC------------
T ss_pred ---------CCc------cc----CCCCCeEEEEeCChHHHHHHHHHHHhcCCEEEeecCCCC---CC------------
Confidence 111 11 1134688998876555667777774 6788776544210 00
Q ss_pred HHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 351 RQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 351 ~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.+.+++|+|++. ++++++++.|++++++
T Consensus 368 -----~~~~~iRis~~~~~t~~~i~~~~~~l~~~~~~ 399 (401)
T 2bwn_A 368 -----RGTERLRFTPSPVHDLKQIDGLVHAMDLLWAR 399 (401)
T ss_dssp -----TTCCEEEECCCTTSCHHHHHHHHHHHHHHC--
T ss_pred -----CCCceEEEEeeCCCCHHHHHHHHHHHHHHHHh
Confidence 023579999984 5666666666666554
No 113
>3uwc_A Nucleotide-sugar aminotransferase; lipopolysaccharide biosynthesis; HET: MSE PMP; 1.80A {Coxiella burnetii}
Probab=99.94 E-value=6.8e-26 Score=211.08 Aligned_cols=304 Identities=17% Similarity=0.192 Sum_probs=202.2
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+...++++.++++++.++.+++++|++|+. ++..+ +++||+|+++.|+|+++. ..++..|.+++.++.+
T Consensus 37 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~~~~~~~~~~gd~v~~~~~~~~~~~----~~~~~~g~~~~~~~~~~~~~ 112 (374)
T 3uwc_A 37 GAELEKFEKRFAALHNAPHAIGVGTGTDALAMSFKMLNIGAGDEVITCANTFIASV----GAIVQAGATPVLVDSENGYV 112 (374)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHH----HHHHHTTCEEEEECBCTTSS
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHH----HHHHHcCCEEEEEecCCCCC
Confidence 3578899999999999999999999999987 45556 899999999999999886 4456789999999875
Q ss_pred -CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCC--CccEEEeccc--ccc
Q 016612 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLEL--GADIVMHSAT--KFI 202 (386)
Q Consensus 128 -d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~--~~di~~~S~s--K~~ 202 (386)
|++++++.+++++++|+ |+||||.+.|+++|.++|+++|+++|+|++|+.+...+.... ..|++++|+| |++
T Consensus 113 ~d~~~l~~~~~~~~~~v~---~~n~~G~~~~~~~i~~~~~~~~~~li~D~~~~~g~~~~~~~~~~~~d~~~~s~~~~K~l 189 (374)
T 3uwc_A 113 IDPEKIEAAITDKTKAIM---PVHYTGNIADMPALAKIAKKHNLHIVEDACQTILGRINDKFVGSWGQFACFSLHPLKNL 189 (374)
T ss_dssp BCGGGTGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECSSSSSS
T ss_pred cCHHHHHHhCCCCceEEE---EeCCcCCcCCHHHHHHHHHHcCCEEEEeCCCccCceeCCeeccccccEEEEeCCCCCcC
Confidence 89999999998898888 899999999999999999999999999999987654322222 3699999977 999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhc------------CCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhh
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAE------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 270 (386)
++++ . +|+++++++.+.+.+....... ...+....+.+....+..+....++..++.+.+.+.+.+
T Consensus 190 ~~~g-~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 267 (374)
T 3uwc_A 190 NVWS-D-AGVIITHSDEYAEKLRLYRNHGLINRDVCVEYGINCRMDTIQAVIANRLMNQLETITEKRRGIAHLYDQSFVD 267 (374)
T ss_dssp CCSS-C-CEEEEESCHHHHHHHHHHTBTTEEETTEESSCCCBCBCCHHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHTGG
T ss_pred Cccc-e-eEEEEeCCHHHHHHHHHHHhcCccccCccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 5533 2 7999988777766665543211 112344555555555555555556666666666666665
Q ss_pred CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccC----CCC
Q 016612 271 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH----ASI 346 (386)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~----~~~ 346 (386)
.+.. +..+..... .......+.+...+ ...+.+.+...|+.++.|........|..... ..+
T Consensus 268 ~~~~--~~~~~~~~~---------~~~~~~~~~~~~~~---~~~l~~~L~~~gi~v~~~~~~~~~~~~~~~~~~~~~~~~ 333 (374)
T 3uwc_A 268 LSEF--IDVPVRREG---------VYHVFHIYVLRVKY---RDQLFQYLKDNGIEVKIHYPIAMHLQPAAKSLGYQQGDF 333 (374)
T ss_dssp GTTT--EECCCCCTT---------EECCCSSEEEEETT---HHHHHHHHHHTTBCCBCSCSSCGGGSGGGGGGCCCTTSC
T ss_pred CCCe--EEeccCCCC---------CceeeEEEEEEcCC---HHHHHHHHHHCCCccccCCCCccccChhhhhcCCccCCC
Confidence 4310 111111100 00001223333332 45667777777887776652222222322110 111
Q ss_pred CHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 347 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
+.... ...+.+|++++. ++++++++.|++++++.
T Consensus 334 ~~~~~----~~~~~lrl~~~~~~t~edi~~~~~~l~~~l~~~ 371 (374)
T 3uwc_A 334 PMAEK----HGEAVITLPAHPYLTEEEINYIIKKVREFYLEK 371 (374)
T ss_dssp HHHHH----HHHHEEEECCCTTSCHHHHHHHHHHHHHHHHTT
T ss_pred ccHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHHHHHhh
Confidence 11100 112569999864 67777777777777653
No 114
>3t18_A Aminotransferase class I and II; PSI-biology, MCSG, midwest center for structural genomics, P 5'-phosphate binding; HET: PLP; 2.86A {Anaerococcus prevotii} PDB: 4emy_A*
Probab=99.94 E-value=3.4e-25 Score=209.23 Aligned_cols=284 Identities=14% Similarity=0.074 Sum_probs=187.9
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
....|.+. |.+ +++++.+++....+.+ +.++++||++++. ++..++++||+|++++|.|+++. ..++..|
T Consensus 71 ~~~~Y~~~~g~~~lr~~la~~~~~~~~~~~~~~i~~t~g~~~al~~~~~~~~~~gd~Vl~~~p~~~~~~----~~~~~~g 146 (413)
T 3t18_A 71 HIASYAPIEGEKDYRKIVIDTLFGPYKPEGYISAIATPGGTGAIRSAIFSYLDEGDPLICHDYYWAPYR----KICEEFG 146 (413)
T ss_dssp HHHSCCCTTCCHHHHHHHHHHHHGGGCCSSEEEEEEESHHHHHHHHHHHHHCCSSCEEEEESSCCTHHH----HHHHHHT
T ss_pred cccCcCCCCCCHHHHHHHHHHHhcccCccccCcEEEcCccHHHHHHHHHHhcCCCCEEEECCCCcccHH----HHHHHhC
Confidence 34567766 776 7899999888777666 6667777779997 55668899999999999999886 4455778
Q ss_pred cEEEEeCCC------CHHHHHhhhCC----Cce-EEEEeCC-CCCCcccccH---HHHHHHHH------HcCCEEEEeCC
Q 016612 119 VVVKRVNTC------DLDEVASAIGP----WTK-LVWVESP-TNPRQQICDI---RKIAEMAH------AHGALLLVDNS 177 (386)
Q Consensus 119 ~~~~~v~~~------d~~~l~~~~~~----~~~-~v~~~~~-~nptG~~~~l---~~i~~la~------~~~~~li~D~a 177 (386)
.+++.++.. |++++++.+++ +++ ++++++| +||||.+.+. ++|+++|+ ++|++||+||+
T Consensus 147 ~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~vi~~~p~~NPtG~~~~~~~l~~l~~~~~~~~~~~~~~~~li~De~ 226 (413)
T 3t18_A 147 RNFKTFEFFTDDFAFNIDVYKEAIDEGIRDSDRIASLINSPGNNPTGYSLSDEEWDEVITFLKEKAEDKDKKITLIVDVA 226 (413)
T ss_dssp CEEEEECCBCTTSSBCHHHHHHHHHHHHHHCSEEEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTTSTTCEEEEEEECT
T ss_pred CeEEEeeccCCCCCcCHHHHHHHHHHHhhcCCCEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHHhhccCCcEEEEEecc
Confidence 899988852 78999988874 677 7888999 9999999975 45556666 89999999999
Q ss_pred CCCCCcc---------CCCCCCc---cEEEeccccccccCCCceEEEEEEc--ChhHHHHHHHhhhh----cCCCCChhh
Q 016612 178 IMSPVLS---------RPLELGA---DIVMHSATKFIAGHSDVMAGVLAVK--GERLAKELYFLQNA----EGSGLAPFD 239 (386)
Q Consensus 178 ~~~~~~~---------~~~~~~~---di~~~S~sK~~~g~~g~~~G~i~~~--~~~~~~~~~~~~~~----~~~~~~~~~ 239 (386)
|...... .....+. +++++|+||.+ +.+|+|+||+++. ++++.+.+...... .....+...
T Consensus 227 y~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (413)
T 3t18_A 227 YLEFAGDGDQQRKFFEKFSNLPRNLFVVVAFSMSKSH-TAYGLRSGAAVGISSSKEIIEEFEASLAHSARCNWSNGTHAA 305 (413)
T ss_dssp TGGGSSSSSTTTGGGGGGTTCCTTEEEEEEEEHHHHT-TCGGGCCEEEEEEESCHHHHHHHHHHHHHHHHHHTSSCCHHH
T ss_pred cccccCChhhHHHHHHHHhhcCCCeeEEEEEecCccC-CCcCcCcEEEEEecCCHHHHHHHHHHHHHhhhccccCCChHH
Confidence 7522111 0011122 38889999999 5568999999982 45566555443322 113456666
Q ss_pred HHHHHhcCCcHH---------HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCH
Q 016612 240 CWICLRGVKTMA---------LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSL 309 (386)
Q Consensus 240 ~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~ 309 (386)
+.++...++... ...+.+.++.+.+.+.+++. ++... ...++ ++++.+.+
T Consensus 306 ~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~---------g~~~~----------~~~~~~~~~~~~~~- 365 (413)
T 3t18_A 306 QNILIELERAENKKIYEQELVDLRNMLKSRADVFVTAAKEN---------KLTMI----------PYFGGFFTFIPTDK- 365 (413)
T ss_dssp HHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT---------TCCCB----------CCCSSSCEEEECSC-
T ss_pred HHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc---------CCCcc----------CCCceEEEEeCCCC-
Confidence 666666565321 11233344444455555543 11111 11233 44444432
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
..++.+.+...|+.+.+| ++++|||++..+.+++++.|.+++++
T Consensus 366 --~~~~~~~l~~~gv~v~~g----------------------------~~~iRis~~~~~~~~~l~~l~~~l~~ 409 (413)
T 3t18_A 366 --AFDIVKDLEKENIFTIPS----------------------------AKGIRVAICGVGEEKIPKLVQRLAFY 409 (413)
T ss_dssp --HHHHHHHHHHTTEECEEC----------------------------SSEEEECTTTSCGGGHHHHHHHHHHH
T ss_pred --HHHHHHHHHhCCEEEecC----------------------------CCceEEEEeeCCHHHHHHHHHHHHHH
Confidence 345555666678876654 24599999865555559999888865
No 115
>3ju7_A Putative PLP-dependent aminotransferase; NP_978343.1, struct genomics, joint center for structural genomics, JCSG; HET: LLP PGE; 2.19A {Bacillus cereus atcc 10987}
Probab=99.94 E-value=6.6e-25 Score=204.36 Aligned_cols=303 Identities=13% Similarity=0.095 Sum_probs=214.0
Q ss_pred chHHHHHHHH-HhhcC-CCceEEeCcHHHHHH-HHHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLL-AKLDK-ADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l-~~~~g-~~~~i~~~~gt~al~-~~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
|...++++.+ ++++| .++.+++++|++|+. ++.++ +++||+|+++.++|.++.. .+...|.+++.++.+
T Consensus 36 ~~~~~l~~~~~a~~~g~~~~~v~~~sgt~al~~al~~l~~~~Gd~Vi~~~~~~~~~~~----~~~~~G~~~~~v~~~~~~ 111 (377)
T 3ju7_A 36 PINQRFEQTIMSGFFQNRGAVTTVANATLGLMAAIQLKKRKKGKYALMPSFTFPATPL----AAIWCGLEPYFIDISIDD 111 (377)
T ss_dssp HHHHHHHHHHHHHTSTTCSEEEEESCHHHHHHHHHHHHSCTTCCEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTT
T ss_pred HHHHHHHHHHHHHHhCCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCCcHHHHH----HHHHcCCEEEEEecCCcc
Confidence 6788999999 99999 778999999999987 55566 8999999999999999864 445789999988753
Q ss_pred ---CHHHHHhhh-CCC--ceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCC---CccEEEecc
Q 016612 128 ---DLDEVASAI-GPW--TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLEL---GADIVMHSA 198 (386)
Q Consensus 128 ---d~~~l~~~~-~~~--~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~---~~di~~~S~ 198 (386)
|++++++++ +++ |++|+ ++||+|...|+++|.++|+ +|+++|+|++|+.+........ ..|+.++|+
T Consensus 112 ~~~d~~~l~~~i~~~~~~tk~v~---~~~~~G~~~~~~~i~~la~-~~~~vi~D~a~a~g~~~~~~~~g~~~~d~~~~S~ 187 (377)
T 3ju7_A 112 WYMDKTVLWDKIEELKEEVAIVV---PYATFGSWMNLEEYEELEK-KGVPVVVDAAPGFGLMNGGMHYGQDFSGMIIYSF 187 (377)
T ss_dssp CSBCHHHHHHHHHHHGGGEEEEC---CBCGGGBCCCCHHHHHHHH-TTCCBEEECTTCTTCEETTEETTTTCSSEEEEEC
T ss_pred CCcCHHHHHHHHhcCCCCceEEE---EECCCCCccCHHHHHHHHh-cCCEEEEECCCccCCeECCEeccCCCCcEEEEEC
Confidence 899999988 566 89887 7788999999999999999 9999999999987764332222 257777775
Q ss_pred --ccccccCCCceEEEEEEcChhHHHHHHHhhhhc------------CCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHH
Q 016612 199 --TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE------------GSGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 264 (386)
Q Consensus 199 --sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (386)
+|++++ | .+|+++++++++.+.++.+.... ...++..++++....++.+..+.++..++++.+
T Consensus 188 ~~~K~l~~--g-~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~g~~~~~~~~~aa~~~~~l~~l~~~~~~~~~~~~~~ 264 (377)
T 3ju7_A 188 HATKPFGI--G-EGGLIYSKNEEDIQRIKRMGNFGFDTNRECTMMGFNCKMSEYAAAIGIATMKKWDDKLKERTRISEWY 264 (377)
T ss_dssp BTTSSSCC--B-SCEEEEESCHHHHHHHHHHTBTTBCTTSCBCSSCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCCCcCCC--C-CcEEEEECCHHHHHHHHHHHhcCCCCCCceeeccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 699965 3 47999998888877776655422 345777788877777888888888889999999
Q ss_pred HHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccccc--
Q 016612 265 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS-- 342 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~-- 342 (386)
.+.|++.+.+.....+. .+ ......++.+.+++....+.+.+.|...||.++.+........|.+..
T Consensus 265 ~~~L~~~~~~~~~~~~~----~~-------~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~~~~~~~~~~~~~~~~~~~~ 333 (377)
T 3ju7_A 265 KQLLQSNGLMKKGWQLQ----KT-------EAVIQQFMPILCPEEVRNKQVIEDLKKQKIEARLYFSPSCHQQVLFRNYK 333 (377)
T ss_dssp HHHHHHTTTTTTTCBCC----CC-------SCBCCSSEEEECCTTSCHHHHHHHHHTTTBCCBCTTSSCGGGSGGGTTSC
T ss_pred HHHhcCCCCccccccCC----CC-------CcceEEEEEEEeCChhhHHHHHHHHHHCCCceecccCCccccchhhhcCC
Confidence 99998765220000000 00 001122345555543347788888888898876654222233333321
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 343 HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
...++..... ..+.+|++++..-.++.++.+.++|++
T Consensus 334 ~~~~p~~~~~----~~~~l~lp~~~~~t~~di~~v~~~l~~ 370 (377)
T 3ju7_A 334 STDLTRTNKI----AKRIVSLPLWEGMTKEIVEQIVICLGQ 370 (377)
T ss_dssp BSCCHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHTC
T ss_pred CCCCHHHHHH----HhCEEECCCCCCCCHHHHHHHHHHHHH
Confidence 1223322221 135599999876666666666666654
No 116
>1b9h_A AHBA synthase, protein (3-amino-5-hydroxybenzoic acid synthase); rifamycin biosynthesis (RIFD gene); HET: PLP; 2.00A {Amycolatopsis mediterranei} SCOP: c.67.1.4 PDB: 1b9i_A*
Probab=99.94 E-value=4.4e-25 Score=206.72 Aligned_cols=255 Identities=18% Similarity=0.232 Sum_probs=181.3
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+...++++.+++++|.++.+++++|++|+.+ +.++ +++||+|+++.|+|+++.. .++..|.+++.++.+
T Consensus 37 ~~~~~~l~~~la~~~~~~~~i~~~sGt~al~~~l~~l~~~~gd~Vi~~~~~~~~~~~----~~~~~g~~~~~v~~~~~~~ 112 (388)
T 1b9h_A 37 GDEVNSFEREFAAHHGAAHALAVTNGTHALELALQVMGVGPGTEVIVPAFTFISSSQ----AAQRLGAVTVPVDVDAATY 112 (388)
T ss_dssp CSHHHHHHHHHHHHTTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTC
T ss_pred CHHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCcC
Confidence 35788999999999999889999999999874 5556 7899999999999999863 445788898888753
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC---CCCCccEEEeccc--c
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP---LELGADIVMHSAT--K 200 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~---~~~~~di~~~S~s--K 200 (386)
|++++++.+++++++|+ |+||+|.+.++++|.++|+++|++||+|++|+.+..... ...+ |++++|+| |
T Consensus 113 ~~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~la~~~~~~li~D~a~~~g~~~~~~~~~~~~-~i~~~S~s~~K 188 (388)
T 1b9h_A 113 NLDPEAVAAAVTPRTKVIM---PVHMAGLMADMDALAKISADTGVPLLQDAAHAHGARWQGKRVGELD-SIATFSFQNGK 188 (388)
T ss_dssp CBCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEEGGGSS-SCEEEECCTTS
T ss_pred CCCHHHHHHhcCcCceEEE---EeCCccCcCCHHHHHHHHHHcCCEEEEecchhcCCccCCeeccccc-ceEEEEccCCC
Confidence 79999999988888887 999999999999999999999999999999987654311 1222 67777777 6
Q ss_pred ccccCCCceEEEEEEcChhH--HHHHHHhhhhc-------------CC--CCChhhHHHHHhcCCcHHHHHHHHHHHHHH
Q 016612 201 FIAGHSDVMAGVLAVKGERL--AKELYFLQNAE-------------GS--GLAPFDCWICLRGVKTMALRVEKQQDNAQK 263 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~--~~~~~~~~~~~-------------~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (386)
+++| + ++|+++++++.+ .+.+....... +. .++....+++...++.+....++..++.+.
T Consensus 189 ~l~g--~-~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~l~~~~~~~~~~~~~ 265 (388)
T 1b9h_A 189 LMTA--G-EGGAVVFPDGETEKYETAFLRHSCGRPRDDRRYFHKIAGSNMRLNEFSASVLRAQLARLDEQIAVRDERWTL 265 (388)
T ss_dssp SSCS--S-SCEEEEECTTCHHHHHHHHHHTBTTCCTTCSSCCCCSCCCBCBCBHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccC--C-CeEEEEECCHHHHHHHHHHHHHhCCCCccCccceeecccccCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6644 2 689999886645 44443322110 11 144555555555666666777777778888
Q ss_pred HHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcCcceeccCCCC
Q 016612 264 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGS 330 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~ 330 (386)
+.+.|++.+.+. .. ..-.. ..+..+.++++.+++. ...+.+.+.+...|+.++.+.
T Consensus 266 l~~~L~~~~~~~-~~-~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~~~ 323 (388)
T 1b9h_A 266 LSRLLGAIDGVV-PQ-GGDVR---------ADRNSHYMAMFRIPGLTEERRNALVDRLVEAGLPAFAAF 323 (388)
T ss_dssp HHHHHHTSTTCE-EC-CCCTT---------CCBCCCSEEEEECTTCCHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHhccCCCcc-cc-CCCcC---------CCccceEEEEEEeCCcCcccHHHHHHHHHHCCCCccccc
Confidence 888887654221 10 00000 0012357888888642 246678888777788776543
No 117
>3ffr_A Phosphoserine aminotransferase SERC; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP MSE P33; 1.75A {Cytophaga hutchinsonii atcc 33406}
Probab=99.94 E-value=3.2e-25 Score=205.41 Aligned_cols=280 Identities=11% Similarity=0.103 Sum_probs=188.4
Q ss_pred chHHHHHHHHHhhcCCC---ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~---~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+..+++++++++++|.+ +.++++||++++.+ +.+++++ +.+++..+.|. . .+...++..|++++.++.+
T Consensus 43 ~~~~~~~~~la~~~g~~~~~~v~~~~g~t~al~~~~~~l~~~-~~i~~~~~~~~-~--~~~~~~~~~g~~~~~v~~~~~~ 118 (362)
T 3ffr_A 43 EVYKTASDNLKTLLELPSNYEVLFLASATEIWERIIQNCVEK-KSFHCVNGSFS-K--RFYEFAGELGREAYKEEAAFGK 118 (362)
T ss_dssp HHHHHHHHHHHHHTTCCTTEEEEEESCHHHHHHHHHHHHCSS-EEEEEECSHHH-H--HHHHHHHHTTCEEEEEECCTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEeCCchHHHHHHHHhccCC-cEEEEcCcHHH-H--HHHHHHHHhCCCeEEEecCCCC
Confidence 46788999999999873 35666777899874 5567777 44445544443 2 2234566779998888754
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc-CCEEEEeCCCCCCCccCCCCCCccEEEecccccccc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH-GALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAG 204 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~-~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g 204 (386)
|+++++ +++++++|++++|+||||.+.|+++|.++|+++ |+++|+|++++.+....... ..|++++|+||++++
T Consensus 119 ~~d~~~l~--~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~p~~~li~D~a~~~~~~~~~~~-~~d~~~~s~~K~~~~ 195 (362)
T 3ffr_A 119 GFYPADIT--VPADAEIICLTHNETSSGVSMPVEDINTFRDKNKDALIFVDAVSSLPYPKFDWT-KIDSVFFSVQKCFGL 195 (362)
T ss_dssp CCCGGGCC--CCTTCCEEEEESEETTTTEECCHHHHTTSGGGSTTSEEEEECTTTTTSSCCCTT-SCSEEEEETTSTTCC
T ss_pred CCCHHHHh--ccCCccEEEEEcCCCCcceeCCHHHHHHHHHhCCCCEEEEecccccCCcccChh-HCcEEEEecccccCC
Confidence 788888 778999999999999999999999999999999 99999999998776532222 289999999999986
Q ss_pred CCCceEEEEEEcChhHHHHHHHhhhhc---------------------CCCCChhhHHHHHhcCC-----cHHHHHHHHH
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQNAE---------------------GSGLAPFDCWICLRGVK-----TMALRVEKQQ 258 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 258 (386)
++| +|++++++ ++.+.+....... ....+......+..+++ .+....++..
T Consensus 196 ~~G--~g~~~~~~-~~~~~~~~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~ 272 (362)
T 3ffr_A 196 PAG--LGVWILND-RVIEKSKALLAKRKSIGTYHTIPSMLEKARVNQTPETPNAMNIFLLGKVTGDMLQISADGIRKQTE 272 (362)
T ss_dssp CSC--CEEEEEEH-HHHHHHHHHHHTTCCCCSTTSHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHCHHHHHHHHH
T ss_pred CCc--eEEEEECH-HHHHHhhhccccCCCCcccccHHHHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccHHHHHHHHH
Confidence 777 57787764 4544444333200 11222232322222222 1345556666
Q ss_pred HHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhh-ccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccc
Q 016612 259 DNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYS-QAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISM 337 (386)
Q Consensus 259 ~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~ 337 (386)
++.+.+.+.+++.+.+ .++.. .....+.++++.+++ ...++.+.+...|+.+++|...
T Consensus 273 ~~~~~l~~~L~~~~g~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~~~gi~~~~g~~~----- 331 (362)
T 3ffr_A 273 EKAALINTYIESSKVF--------------SFGVEDAKLRSMTTIVANTTM--LPGEINKILEPFDMAVGAGYGS----- 331 (362)
T ss_dssp HHHHHHHHHHHHCSSE--------------EESSSCGGGBCSSEEEEEESS--CHHHHHHHHGGGTEEEEECSGG-----
T ss_pred HHHHHHHHHHHHccCc--------------eeccCChhhcCCceEEEecCC--CHHHHHHHHHHCCeEEecCccc-----
Confidence 7777777777765421 11110 001235678888876 4677888888888887766321
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhc
Q 016612 338 PCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRT 383 (386)
Q Consensus 338 p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~ 383 (386)
..++++|||++....++.++.+.++|++
T Consensus 332 ------------------~~~~~iRis~~~~~~~e~i~~l~~~l~~ 359 (362)
T 3ffr_A 332 ------------------KKETQIRIANFPAHSLEQVHKLVQTLKE 359 (362)
T ss_dssp ------------------GTTTEEEEECCTTSCHHHHHHHHHHHHH
T ss_pred ------------------cCCCEEEEECCCCCCHHHHHHHHHHHHH
Confidence 1357799999876666666666666654
No 118
>3d6k_A Putative aminotransferase; APC82464, corynebacterium diphthe structural genomics, PSI-2, protein structure initiative; 2.00A {Corynebacterium diphtheriae}
Probab=99.94 E-value=9.8e-26 Score=213.53 Aligned_cols=296 Identities=15% Similarity=0.099 Sum_probs=190.6
Q ss_pred CccccCC-CCchHHHHHHHHHhhcCCC-ceEEeCcH-HHHH--HHHHH-hcCC------------CCEEEecCCCCCcHH
Q 016612 46 PYDYTRS-GNPTRDALESLLAKLDKAD-RALCFTSG-MAAL--AAVTH-LLGT------------GEEIVAGDDLYGGTD 107 (386)
Q Consensus 46 ~~~y~~~-g~~~~~~l~~~l~~~~g~~-~~i~~~~g-t~al--~~~~~-~~~~------------g~~Vlv~~~~~~~~~ 107 (386)
.+.|... |.+ ++++.++++++.+ +.|++++| ++++ .++.. +.++ +|+|++++|+|+++.
T Consensus 69 ~~~Y~~~~G~~---~lr~~ia~~~~~~~~~i~~t~G~~~al~l~~~~~~l~~~~~~g~~~~~~~d~~~Vl~~~p~y~~~~ 145 (422)
T 3d6k_A 69 CRNYGGLLGIA---DIRELWAEALGLPADLVVAQDGSSLNIMFDLISWSYTWGNNDSSRPWSAEEKVKWLCPVPGYDRHF 145 (422)
T ss_dssp TTSSCCSSCCH---HHHHHHHHHHTCCGGGEEECSSCHHHHHHHHHHHHHHHCCTTCSSCGGGSSCCEEEEEESCCHHHH
T ss_pred hhCCCCCCCCH---HHHHHHHHHhCCChhHEEEecchHHHHHHHHHHHHhcCcccccccccccCCCCEEEEeCCccHHHH
Confidence 4567665 554 5555666666765 45555555 5776 55444 4455 347999999999886
Q ss_pred HHHhhhcccCCcEEEEeCCC----CHHHHHhhhCC-CceEEE-EeCCCCCCcccccHH---HHHHHHH-HcCCEEEEeCC
Q 016612 108 RLLSRVTPKTGVVVKRVNTC----DLDEVASAIGP-WTKLVW-VESPTNPRQQICDIR---KIAEMAH-AHGALLLVDNS 177 (386)
Q Consensus 108 ~~~~~~~~~~g~~~~~v~~~----d~~~l~~~~~~-~~~~v~-~~~~~nptG~~~~l~---~i~~la~-~~~~~li~D~a 177 (386)
..++..|.+++.++.+ |++++++.+++ ++++|+ +++|+||||.+.+.+ +|.++|+ ++|++||+||+
T Consensus 146 ----~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~~~~~~~~~li~De~ 221 (422)
T 3d6k_A 146 ----TITEHFGFEMINVPMTDEGPDMGVVRELVKDPQVKGMWTVPVFGNPTGVTFSEQTCRELAEMSTAAPDFRIVWDNA 221 (422)
T ss_dssp ----HHHHHHTCEEEEEEEETTEECHHHHHHHHTSTTEEEEEECCSSCTTTCCCCCHHHHHHHHHCCCSSTTCEEEEECT
T ss_pred ----HHHHHcCCEEEecCCCCCCCCHHHHHHHHhcCCCeEEEEcCCCCCCCCCCCCHHHHHHHHHHHhhccCCEEEEECC
Confidence 4455678888888763 89999999875 789988 689999999999855 7888888 89999999999
Q ss_pred CCCCCc-c------CC-------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHH
Q 016612 178 IMSPVL-S------RP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWIC 243 (386)
Q Consensus 178 ~~~~~~-~------~~-------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (386)
|+...+ . .. ...+.++++.|+||+ +++ |+|+||++++ +++.+.+.........+.+...+.++
T Consensus 222 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~-~~~-GlriG~~~~~-~~l~~~l~~~~~~~~~~~~~~~q~a~ 298 (422)
T 3d6k_A 222 YALHTLSDEFPIVHNVIEFAQAAGNPNRFWFMSSTSKI-THA-GSGVSFFASS-KENIEWYASHANVRGIGPNKLNQLAH 298 (422)
T ss_dssp TTTCBSSSCCCCCCCHHHHHHHTTCTTCEEEEEESTTT-SCT-TSSCEEEECC-HHHHHHHHHHHHHHCSCCCHHHHHHH
T ss_pred ccccccCCCCCCCcChhhHhhccCCCCcEEEEcChhhh-cCc-ccceEEEEeC-HHHHHHHHHHHHhhcCCCCHHHHHHH
Confidence 973111 1 11 123678999999998 454 7999999987 55666666555555555667666666
Q ss_pred HhcCCcH-------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHH
Q 016612 244 LRGVKTM-------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVV 316 (386)
Q Consensus 244 ~~~~~~~-------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~ 316 (386)
...++.. ....+.+.++.+.+.+.+.+. ++.+++..+. . +..+.++++.++.. ..+.+.
T Consensus 299 ~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~----------l~~~~~~~~~--~-p~~g~~~~~~~~~~-~~~~~~ 364 (422)
T 3d6k_A 299 AQFFGDVAGLKAHMLKHAASLAPKFERVLEILDSR----------LSEYGVAKWT--S-PTGGYFISVDVVPG-TASRVV 364 (422)
T ss_dssp HHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HGGGTCEEEC--C-CSBSSCEEEEESTT-CHHHHH
T ss_pred HHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCcCCceEEe--C-CCcceEEEEECCCC-CHHHHH
Confidence 5555441 111222333444444455431 0000001110 1 12356788888643 245667
Q ss_pred hhcCcceeccCCC-CccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhc
Q 016612 317 ETTKYFSITVSFG-SVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 383 (386)
Q Consensus 317 ~~l~~~gi~~~~G-~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~ 383 (386)
+.+...|+.+.+| ..+..- + ...++++|||++ .+++++.++.|++++++
T Consensus 365 ~~l~~~gV~v~~~g~~f~~~--~----------------~~~~~~iRis~~~~~~e~i~~~~~~l~~~l~~ 417 (422)
T 3d6k_A 365 ELAKEAGIALTGAGSSFPLH--N----------------DPNNENIRLAPSLPPVAELEVAMDGFATCVLM 417 (422)
T ss_dssp HHHHHTTEECCCTTTTSGGG--C----------------CTTSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHCCeEEEcCccccCCC--C----------------CCCCCeEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 7777788988874 322100 0 012578999997 37788888888888764
No 119
>3nx3_A Acoat, acetylornithine aminotransferase; csgid, structural genomics, center for structural genomics O infectious diseases; 1.80A {Campylobacter jejuni subsp}
Probab=99.94 E-value=3.7e-26 Score=214.52 Aligned_cols=322 Identities=14% Similarity=0.100 Sum_probs=207.6
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHH-H
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAVT-H 88 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~-~ 88 (386)
..+++..+ ...+|..+|.+.++...... ...+.|+....+.+.++++++++++|.++.++++||++|+..++ .
T Consensus 37 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~----~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~ea~~~al~~ 112 (395)
T 3nx3_A 37 KYLDFSSGIGVCALGYNHAKFNAKIKAQVD----KLLHTSNLYYNENIAAAAKNLAKASALERVFFTNSGTESIEGAMKT 112 (395)
T ss_dssp EEEESSHHHHTCTTCBSCHHHHHHHHHHHT----TCSCCCTTSBCHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHH
T ss_pred EEEECCCcHHhccCCCCCHHHHHHHHHHHH----hccccccccCCHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHH
Confidence 35566522 35577756665543221111 12223332345689999999999999888999999999987443 3
Q ss_pred hc-------CCCCEEEecCCCCCcHHHHH---------hhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCC
Q 016612 89 LL-------GTGEEIVAGDDLYGGTDRLL---------SRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPR 152 (386)
Q Consensus 89 ~~-------~~g~~Vlv~~~~~~~~~~~~---------~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~npt 152 (386)
+. .++++|++.+|.|+++.... .......+.++..++..|++++++++++++++|++++++|++
T Consensus 113 ~~~~~~~~g~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~~ 192 (395)
T 3nx3_A 113 ARKYAFNKGVKGGQFIAFKHSFHGRTLGALSLTANEKYQKPFKPLISGVKFAKYNDISSVEKLVNEKTCAIILESVQGEG 192 (395)
T ss_dssp HHHHHHHTTCTTCEEEEETTCCCCSSHHHHTTCCCHHHHGGGCSCCSCEEEECTTCHHHHHTTCCTTEEEEEEESEECTT
T ss_pred HHHHhhccCCCCCEEEEEcCCcCCCCHHHHhhcCCcccccccCCCCCCcEEeCCCCHHHHHHhccCCeEEEEEeCccCCC
Confidence 32 46799999999997753221 122233446778888889999999999899999999999999
Q ss_pred ccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhH-H
Q 016612 153 QQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERL-A 221 (386)
Q Consensus 153 G~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~-~ 221 (386)
|.+.+ +++|.++|++||+++|+||+|+ .+... .......|++ |+||.+++ |+++|+++++++ + .
T Consensus 193 G~~~~~~~~l~~l~~l~~~~~~~li~Dev~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~--G~~~G~~~~~~~-~~~ 267 (395)
T 3nx3_A 193 GINPANKDFYKALRKLCDEKDILLIADEIQCGMGRSGKFFAYEHAQILPDIM--TSAKALGC--GLSVGAFVINQK-VAS 267 (395)
T ss_dssp SCEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGTT--TSCCEEEEECHH-HHH
T ss_pred CcccCCHHHHHHHHHHHHHcCCEEEEEecccCCCcCCcchhHHhcCCCCCEE--EecccccC--CCceEEEEEchh-hhh
Confidence 99976 9999999999999999999986 22211 1112334655 57899964 688999998754 4 5
Q ss_pred HHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC
Q 016612 222 KELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 299 (386)
Q Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 299 (386)
+.+...........++..++++..+++.+. ...++..++.+.+.+.+++.. ..++.. ...++.+
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~----------~~~~~~----~~~~~~g 333 (395)
T 3nx3_A 268 NSLEAGDHGSTYGGNPLVCAGVNAVFEIFKEEKILENVNKLTPYLEQSLDELI----------NEFDFC----KKRKGLG 333 (395)
T ss_dssp HHSCTTCCSSCBSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH----------HHCTTE----EEEEEET
T ss_pred hhcCCcccCCCCCCCHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHH----------HhCCCe----EEEEeEE
Confidence 544333223334556666666555444221 122333344444444444321 000100 1113457
Q ss_pred ceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHH
Q 016612 300 SVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLIS 375 (386)
Q Consensus 300 ~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~ 375 (386)
.++++.+.+......+.+.+...|+.+++++ ++++|++++ .++++++++
T Consensus 334 ~~~~~~~~~~~~~~~~~~~l~~~Gi~v~~~~---------------------------~~~iRi~~~~~~t~e~i~~~l~ 386 (395)
T 3nx3_A 334 FMQGLSLDKSVKVAKVIQKCQENALLLISCG---------------------------ENDLRFLPPLILQKEHIDEMSE 386 (395)
T ss_dssp TEEEEEECTTSCHHHHHHHHHHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHHHHH
T ss_pred EEEEEEeCCcchHHHHHHHHHHCCCEEecCC---------------------------CCEEEEECCCCCCHHHHHHHHH
Confidence 8889988654446777888877888765432 456999864 477888888
Q ss_pred HHHHHHhc
Q 016612 376 DLDKALRT 383 (386)
Q Consensus 376 ~l~~~l~~ 383 (386)
.|++++++
T Consensus 387 ~l~~~l~~ 394 (395)
T 3nx3_A 387 KLRKALKS 394 (395)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHh
Confidence 88888764
No 120
>3ez1_A Aminotransferase MOCR family; YP_604413.1, struct genomics, joint center for structural genomics, JCSG; 2.60A {Deinococcus geothermalis dsm 11300}
Probab=99.94 E-value=2.9e-25 Score=210.38 Aligned_cols=295 Identities=16% Similarity=0.137 Sum_probs=193.3
Q ss_pred ccc-cCC-CCchHHHHHHHHHhhcCCC--ceEEeCcHHHHHH--H-HHHhcC--C---------CCEEEecCCCCCcHHH
Q 016612 47 YDY-TRS-GNPTRDALESLLAKLDKAD--RALCFTSGMAALA--A-VTHLLG--T---------GEEIVAGDDLYGGTDR 108 (386)
Q Consensus 47 ~~y-~~~-g~~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~--~-~~~~~~--~---------g~~Vlv~~~~~~~~~~ 108 (386)
..| .+. |.+ ++++.++++++.+ +.+++++++++++ + +..+++ + ||+|++++|+|+++.
T Consensus 63 ~~Yp~~~~g~~---~lr~~ia~~~~~~~~~i~~t~G~~~al~~~~~~~~l~~~~~g~~~~~~~~gd~Vlv~~p~y~~~~- 138 (423)
T 3ez1_A 63 RNYPGGVAGLP---SARALFAGYLDVKAENVLVWNNSSLELQGLVLTFALLHGVRGSTGPWLSQTPKMIVTVPGYDRHF- 138 (423)
T ss_dssp TSSCSCTTCCH---HHHHHHHHHTTSCGGGEEECSSCHHHHHHHHHHHHHHTCCTTCSSCGGGGCCEEEEEESCCHHHH-
T ss_pred hCCCCCCCChH---HHHHHHHHHhCCChhhEEEeCCcHHHHHHHHHHHHHhccCCCccccccCCCCEEEEcCCCcHHHH-
Confidence 556 544 444 6677777777765 4455555568885 4 455677 7 599999999998886
Q ss_pred HHhhhcccCCcEEEEeCCC----CHHHHHhhh--CCCceEEEEe-CCCCCCcccccHH---HHHHHH-HHcCCEEEEeCC
Q 016612 109 LLSRVTPKTGVVVKRVNTC----DLDEVASAI--GPWTKLVWVE-SPTNPRQQICDIR---KIAEMA-HAHGALLLVDNS 177 (386)
Q Consensus 109 ~~~~~~~~~g~~~~~v~~~----d~~~l~~~~--~~~~~~v~~~-~~~nptG~~~~l~---~i~~la-~~~~~~li~D~a 177 (386)
..++..|.+++.++.+ |++++++++ .+++++|++. +|+||||.+.+.+ +|.++| +++|+++|+||+
T Consensus 139 ---~~~~~~g~~~~~v~~~~~g~d~~~l~~~l~~~~~~~~v~~~~~~~NPtG~~~~~~~l~~l~~~a~~~~~~~li~De~ 215 (423)
T 3ez1_A 139 ---LLLQTLGFELLTVDMQSDGPDVDAVERLAGTDPSVKGILFVPTYSNPGGETISLEKARRLAGLQAAAPDFTIFADDA 215 (423)
T ss_dssp ---HHHHHHTCEEEEEEEETTEECHHHHHHHHHSCTTEEEEEECSSSCTTTCCCCCHHHHHHHHTCCCSSTTCEEEEECT
T ss_pred ---HHHHHcCCEEEeccCCCCCCCHHHHHHHHhhCCCceEEEECCCCCCCCCcCCCHHHHHHHHHHHHhccCCEEEEECC
Confidence 4455678888888763 899999999 5789999765 8999999999865 888888 899999999999
Q ss_pred CCCCCccC--------C-------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHH
Q 016612 178 IMSPVLSR--------P-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWI 242 (386)
Q Consensus 178 ~~~~~~~~--------~-------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (386)
|+...+.. . ...+.++++.|+||++ + +|+|+||++++ +.+.+.+...........+...+.+
T Consensus 216 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~-~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~a 292 (423)
T 3ez1_A 216 YRVHHLVEEDRAEPVNFVVLARDAGYPDRAFVFASTSKIT-F-AGAGLGFVASS-EDNIRWLSKYLGAQSIGPNKVEQAR 292 (423)
T ss_dssp TSSCBCCSSSCCCCCCHHHHHHHHTCTTSEEEEEESTTTS-C-SSSSCEEEEEC-HHHHHHHHHHHHHSCSCCCHHHHHH
T ss_pred cchhhcCCCCCCCCcchhhhhhccCCCCeEEEEeCchhhc-c-CCcceEEEEeC-HHHHHHHHHHHhhhccCCCHHHHHH
Confidence 87422211 1 1336789999999984 4 37899999987 4566666666655555666666555
Q ss_pred HHhcCCc----H----HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCC-chhhhhhccCCCCceEEEEeCCHHhHH
Q 016612 243 CLRGVKT----M----ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHP-GHELHYSQAKGAGSVLSFLTGSLALSK 313 (386)
Q Consensus 243 ~~~~~~~----~----~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~ 313 (386)
+...+.. + ....+.+.++.+.+.+.+.+. ++.+. +..+. . +..+.++++.++.. ..+
T Consensus 293 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~----------l~~~~~~~~~~--~-p~~g~~~~~~~~~~-~~~ 358 (423)
T 3ez1_A 293 HVKFLTEYPGGLEGLMRDHAAIIAPKFRAVDEVLRAE----------LGEGGEYATWT--L-PKGGYFISLDTAEP-VAD 358 (423)
T ss_dssp HHHHHHHSTTHHHHHHHHHHHHHHHHHHHHHHHHHHH----------HTTTTSSEEEC--C-CSBSSCEEEEESSS-CHH
T ss_pred HHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHh----------cCcCCCceEEe--C-CCccEEEEEECCCC-cHH
Confidence 4433322 1 111222333344444444331 11111 11111 1 12466788888643 356
Q ss_pred HHHhhcCcceeccCC-CCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc---CChHHHHHHHHHHHhc
Q 016612 314 HVVETTKYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI---EDVNDLISDLDKALRT 383 (386)
Q Consensus 314 ~l~~~l~~~gi~~~~-G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~---~~~~~~i~~l~~~l~~ 383 (386)
.+.+.+...|+.+.+ |..+..- ....++++|||++. +++++.++.|.+++++
T Consensus 359 ~~~~~l~~~gv~v~~~g~~~~~~------------------~~~~~~~iRis~~~~~~~~i~~~~~~l~~~l~~ 414 (423)
T 3ez1_A 359 RVVKLAEAAGVSLTPAGATYPAG------------------QDPHNRNLRLAPTRPPVEEVRTAMQVVAACIRL 414 (423)
T ss_dssp HHHHHHHHTTEECCCTTTTSSTT------------------CCSSSCEEEECCSSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCcEEecCcccccCC------------------CCCCCCeEEEEcCCCCHHHHHHHHHHHHHHHHH
Confidence 777777788998887 4432100 01136789999974 7778888888888765
No 121
>7aat_A Aspartate aminotransferase; transferase(aminotransferase); HET: PLP; 1.90A {Gallus gallus} SCOP: c.67.1.1 PDB: 1ivr_A* 1map_A* 1maq_A* 1oxo_A* 1oxp_A* 1ama_A* 1tas_A* 1tat_A* 1tar_A* 8aat_A* 9aat_A* 1aka_A* 1akb_A* 1akc_A* 3pd6_A* 3hlm_A* 3pdb_A*
Probab=99.94 E-value=4.1e-25 Score=207.82 Aligned_cols=167 Identities=14% Similarity=0.111 Sum_probs=127.3
Q ss_pred CCCccccCC-CCc-hHHHHHHHHHhhcC----CCceEE--eCcHHHHHHHHH-H---hcCCCCEEEecCCCCCcHHHHHh
Q 016612 44 NGPYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FTSGMAALAAVT-H---LLGTGEEIVAGDDLYGGTDRLLS 111 (386)
Q Consensus 44 ~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~~gt~al~~~~-~---~~~~g~~Vlv~~~~~~~~~~~~~ 111 (386)
.....|... |.+ +++++.+++...+| .++.++ +++|+++++.+. . ++++||+|++++|+|.++.
T Consensus 62 ~~~~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~v~t~G~~~al~~~~~~l~~~~~~gd~Vlv~~p~~~~~~---- 137 (401)
T 7aat_A 62 KMDKEYLPIAGLADFTRASAELALGENSEAFKSGRYVTVQGISGTGSLRVGANFLQRFFKFSRDVYLPKPSWGNHT---- 137 (401)
T ss_dssp TCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEEESCCTTHH----
T ss_pred ccccCCCCCCCCHHHHHHHHHHhcCCCccccccCceEEEecCcchHHHHHHHHHHHHhccCCCEEEEcCCCchhHH----
Confidence 356678776 776 78888888876655 445544 666679987443 3 3489999999999999986
Q ss_pred hhcccCCcEEEEeCCC-------CHHHHHhhhC---CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCC
Q 016612 112 RVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~~-------d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~ 178 (386)
..++..|.+++.++.. |++++++.+. ++++++++++||||||.+.+ +++|+++|+++|+++|+||+|
T Consensus 138 ~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~Deay 217 (401)
T 7aat_A 138 PIFRDAGLQLQAYRYYDPKTCSLDFTGAMEDISKIPEKSIILLHACAHNPTGVDPRQEQWKELASVVKKRNLLAYFDMAY 217 (401)
T ss_dssp HHHHHTTCEEEEEECEETTTTEECHHHHHHHHTTSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHcCCeeEeeeeeccccCccCHHHHHHHHHhCCCCcEEEEeCCCCCCCCCCCCHHHHHHHHHHHHhCCcEEEEcccc
Confidence 4455678888888752 6776665553 67899999999999999875 788999999999999999998
Q ss_pred CCCCccCC-----------CCCCccEEEeccccccccCCCceEEEEEE
Q 016612 179 MSPVLSRP-----------LELGADIVMHSATKFIAGHSDVMAGVLAV 215 (386)
Q Consensus 179 ~~~~~~~~-----------~~~~~di~~~S~sK~~~g~~g~~~G~i~~ 215 (386)
........ ...+.++++.|+||.+ |.+|+|+||+++
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~~-~~~G~RiG~l~~ 264 (401)
T 7aat_A 218 QGFASGDINRDAWALRHFIEQGIDVVLSQSYAKNM-GLYGERAGAFTV 264 (401)
T ss_dssp TTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEEEE
T ss_pred ccccCCCccccHHHHHHHHhcCCcEEEEecCCccc-ccccCceEEEEE
Confidence 75433211 1235679999999999 566899999887
No 122
>3g7q_A Valine-pyruvate aminotransferase; NP_462565.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Salmonella typhimurium}
Probab=99.94 E-value=5.7e-25 Score=207.88 Aligned_cols=303 Identities=15% Similarity=0.129 Sum_probs=191.5
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCC-----EEEec-CCCCCcHHHHHhh-
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGE-----EIVAG-DDLYGGTDRLLSR- 112 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~-----~Vlv~-~~~~~~~~~~~~~- 112 (386)
..|... |.+ +++++.+++.+.+|. ++++++++|++++++ +..++++|| +|+++ .|+|+++...+..
T Consensus 69 ~~y~~~~g~~~lr~~ia~~~~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~vi~~~~p~~~~~~~~~~~~ 148 (417)
T 3g7q_A 69 CNYDGPQGKTALLNALAVLLRETLGWDIEPQNIALTNGSQSAFFYLFNLFAGRRADGSTKKVLFPLAPEYIGYADSGLED 148 (417)
T ss_dssp HSTTCTTSHHHHHHHHHHHHHHHHCCCCCGGGEEEESCHHHHHHHHHHHHSBC----CCBEEEESSCCCHHHHHC-----
T ss_pred eccCCCCCcHHHHHHHHHHHHHHhCCCCCcccEEEeCCcHHHHHHHHHHHcCCCccCCcceEEEeCCCccccchhhccch
Confidence 357766 654 777788877766553 356677777899975 555788887 89997 9999887533211
Q ss_pred -hcccCCcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 113 -VTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 113 -~~~~~g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
.....+..+..++.. |+++++ ++++++++++++|+||||.+.+ +++|.++|++||+++|+|++|+.+.
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~d~~~l~--~~~~~~~v~~~~p~NptG~~~~~~~~~~l~~~a~~~~~~li~De~~~~~~ 226 (417)
T 3g7q_A 149 DLFVSARPNIELLPEGQFKYHVDFEHLH--IGEETGMICVSRPTNPTGNVITDEELMKLDRLANQHNIPLVIDNAYGVPF 226 (417)
T ss_dssp CCEEECCCEEEEEGGGEEEEECCGGGCC--CCTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCCEEEECTTCTTT
T ss_pred hhhccccCcccccCCcccccccCHHHhc--cccCceEEEECCCCCCCCCccCHHHHHHHHHHHHHcCCEEEEeCCCcccc
Confidence 122344556555532 778887 6788999999999999999998 8999999999999999999997422
Q ss_pred c----c--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC--cHHH--
Q 016612 183 L----S--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK--TMAL-- 252 (386)
Q Consensus 183 ~----~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~-- 252 (386)
. . .+...+.++++.|+|| + +.+|+|+||++++ +++.+.+...........++..+.++...+. .+..
T Consensus 227 ~~~~~~~~~~~~~~~~i~~~s~sK-~-~~~G~r~G~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 303 (417)
T 3g7q_A 227 PGIIFSEARPLWNPNIILCMSLSK-L-GLPGSRCGIIIAN-DKTITAIANMNGIISLAPGGMGPAMMCEMIKRNDLLRLS 303 (417)
T ss_dssp TCCBCSCCCCCCCTTEEEEEESGG-G-TCTTSCCEEEECC-HHHHHHHHHHHHHHCCCCCSHHHHHHHHHHHTTCHHHHH
T ss_pred ccccccccccCCCCCEEEEEechh-c-cCCCcceEEEEeC-HHHHHHHHHhhcceeeCCCcHHHHHHHHHHcCcchHHHH
Confidence 1 1 1222467899999999 5 5568999999986 5566666655554444445544444433221 1111
Q ss_pred ---HHHHHHHHHHHHHHHHhhC-CCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccC
Q 016612 253 ---RVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVS 327 (386)
Q Consensus 253 ---~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~ 327 (386)
..+.+.++.+.+.+.+.+. +. + ++.+. .+..+.++++.++. ......+.+.+...|+.+.
T Consensus 304 ~~~~~~~~~~~~~~~~~~l~~~l~~--------~----~~~~~---~~~~g~~~~~~~~~~~~~~~~l~~~l~~~gi~v~ 368 (417)
T 3g7q_A 304 ETVIKPFYYQRVQQTIAIIRRYLSE--------E----RCLIH---KPEGAIFLWLWFKDLPITTELLYQRLKARGVLMV 368 (417)
T ss_dssp HHTHHHHHHHHHHHHHHHHHHHCCT--------T----TCEEE---CCCBSSEEEEECTTCSSCHHHHHHHHHHTTEECE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccc--------C----Cceee---CCCcceEEEEEcCCCCCCHHHHHHHHHHCCEEEE
Confidence 2233445555566666542 21 0 11111 12235677777754 3346677777777889888
Q ss_pred CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 328 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
+|..+..- . .... +..++++|||++. +++++.++.|.+++++
T Consensus 369 ~g~~f~~~----~--~~~~--------~~~~~~iRis~~~~~~~i~~~~~~l~~~l~~ 412 (417)
T 3g7q_A 369 PGHYFFPG----L--DKPW--------PHTHQCMRMNYVPEPDKIEAGVKILAEEIER 412 (417)
T ss_dssp EGGGGCTT----B--SSCC--------GGGGGEEEEESCSCHHHHHHHHHHHHHHHHH
T ss_pred CchhhCCC----C--cccc--------ccCCCeEEEEecCCHHHHHHHHHHHHHHHHH
Confidence 77653210 0 0000 0014679999975 5677788888887764
No 123
>1m32_A 2-aminoethylphosphonate-pyruvate aminotransferase; PLP-dependent aminotransferase fold; HET: PLP; 2.20A {Salmonella typhimurium} SCOP: c.67.1.3
Probab=99.94 E-value=1.2e-25 Score=208.39 Aligned_cols=285 Identities=15% Similarity=0.145 Sum_probs=187.5
Q ss_pred chHHHHHHHHHhhcCCC----ceEEeCcHHHHHHH-HHHhcCCCCEEEecC-CCCCcHHHHHhhhcccCCcEEEEeCC--
Q 016612 55 PTRDALESLLAKLDKAD----RALCFTSGMAALAA-VTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNT-- 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~----~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~-~~~~~~~~~~~~~~~~~g~~~~~v~~-- 126 (386)
+...++++.+++++|.+ +.+++++|++++.+ +.+++++||+|++.+ +.|++.. ...++..|.+++.++.
T Consensus 37 ~~~~~l~~~la~~~g~~~~~~~v~~~~g~t~a~~~~~~~~~~~gd~vi~~~~~~~~~~~---~~~~~~~g~~~~~v~~~~ 113 (366)
T 1m32_A 37 GVVEQIRQQLTALATASEGYTSVLLQGSGSYAVEAVLGSALGPQDKVLIVSNGAYGARM---VEMAGLMGIAHHAYDCGE 113 (366)
T ss_dssp TTHHHHHHHHHHHHCSSSSEEEEEEESCHHHHHHHHHHHSCCTTCCEEEEESSHHHHHH---HHHHHHHTCCEEEEECCT
T ss_pred HHHHHHHHHHHHHhCCCCcCcEEEEecChHHHHHHHHHHhcCCCCeEEEEeCCCccHHH---HHHHHHhCCceEEEeCCC
Confidence 56788999999999843 36677778899874 555778999988765 5554422 2445566888887775
Q ss_pred ---CCHHHHHhhhCC--CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC-CCCCCccEEEecccc
Q 016612 127 ---CDLDEVASAIGP--WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLELGADIVMHSATK 200 (386)
Q Consensus 127 ---~d~~~l~~~~~~--~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-~~~~~~di~~~S~sK 200 (386)
.|++++++++++ ++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+.... ....+.|++++|+||
T Consensus 114 ~~~~d~~~l~~~l~~~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~~~~~~~~~di~~~s~~K 193 (366)
T 1m32_A 114 VARPDVQAIDAILNADPTISHIAMVHSETTTGMLNPIDEVGALAHRYGKTYIVDAMSSFGGIPMDIAALHIDYLISSANK 193 (366)
T ss_dssp TSCCCHHHHHHHHHHCTTCCEEEEESEETTTTEECCHHHHHHHHHHHTCEEEEECTTTTTTSCCCTTTTTCSEEEEESSS
T ss_pred CCCCCHHHHHHHHhcCCCeEEEEEecccCCcceecCHHHHHHHHHHcCCEEEEECCccccCcCccccccCccEEEecCcc
Confidence 388999998874 58899999999999999999999999999999999999998765432 223468999999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHh------------h---hh-c--CCCCChhhHHHHHhcCCcH------HHHHHH
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFL------------Q---NA-E--GSGLAPFDCWICLRGVKTM------ALRVEK 256 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~------------~---~~-~--~~~~~~~~~~~~~~~~~~~------~~~~~~ 256 (386)
+++++.| +|+++++++ +.+.+... . .. . ....+.....++..+++.+ ....++
T Consensus 194 ~~~~~~g--~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~g~~~~~~~~ 270 (366)
T 1m32_A 194 CIQGVPG--FAFVIAREQ-KLAACKGHSRSLSLDLYAQWRCMEDNHGKWRFTSPTHTVLAFAQALKELAKEGGVAARHQR 270 (366)
T ss_dssp TTCCCSS--EEEEEEEHH-HHTTCTTCCSCSTTCHHHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cccCCCc--eEEEEECHH-HHHhhcCCCCCccccHHHHHhhhcccCCCCCCCCCHHHHHHHHHHHHHHHHccCHhHHHHH
Confidence 9877766 599998754 43322110 0 00 0 1123333333333333322 233444
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhcCcceeccCCCCcccc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSL 334 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~~G~~~~~ 334 (386)
..++.+.+.+.|++.. +. ++.......+.++++.+++ .....++.+.+...|+.+.+|..+
T Consensus 271 ~~~~~~~l~~~L~~~~---------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~-- 333 (366)
T 1m32_A 271 YQQNQRSLVAGMRALG---------FN------TLLDDELHSPIITAFYSPEDPQYRFSEFYRRLKEQGFVIYPGKVS-- 333 (366)
T ss_dssp HHHHHHHHHHHHHHTT---------CC------BSSCGGGBCSSEEEEECCCCTTCCHHHHHHHHHHTTEECEECCCS--
T ss_pred HHHHHHHHHHHHHHCC---------Ce------eccCchhcCceEEEEEcCccCCCCHHHHHHHHHHCCEEEECCcCC--
Confidence 5555666666665431 11 1100001124478888763 334667777777778877665431
Q ss_pred ccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 335 ISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 335 ~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
.++++|++++. ++++++++.|++++++.
T Consensus 334 ----------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~~~~~ 365 (366)
T 1m32_A 334 ----------------------QSDCFRIGNIGEVYAADITALLTAIRTAMYWT 365 (366)
T ss_dssp ----------------------SSCEEEEECCSSCCHHHHHHHHHHHHHHCTTC
T ss_pred ----------------------CCCEEEEecCCCCCHHHHHHHHHHHHHHHHhc
Confidence 25679999974 56666777777666543
No 124
>3if2_A Aminotransferase; YP_265399.1, structura genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI-2; HET: PLP; 2.50A {Psychrobacter arcticus 273-4}
Probab=99.93 E-value=8.7e-25 Score=208.39 Aligned_cols=306 Identities=14% Similarity=0.116 Sum_probs=195.6
Q ss_pred ccccCC-CCc-hHHHHHHHHHhhcCC----CceEEeCcHHHHHHH-HHHhcCCCC--------------EEEec-CCCCC
Q 016612 47 YDYTRS-GNP-TRDALESLLAKLDKA----DRALCFTSGMAALAA-VTHLLGTGE--------------EIVAG-DDLYG 104 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~~l~~~~g~----~~~i~~~~gt~al~~-~~~~~~~g~--------------~Vlv~-~~~~~ 104 (386)
..|... |.+ +++++.+++.+.+|. ++++++++|++++++ +..++++|| +|+++ .|+|+
T Consensus 77 ~~y~~~~g~~~lr~~ia~~l~~~~g~~~~~~~i~~t~G~t~al~~~~~~l~~~gd~~~~~~~~~~g~~~~vi~~~~p~~~ 156 (444)
T 3if2_A 77 ANYSNPQGDSAFIDALVGFFNRHYDWNLTSENIALTNGSQNAFFYLFNLFGGAFVNEHSQDKESKSVDKSILLPLTPEYI 156 (444)
T ss_dssp HSCCCTTCCHHHHHHHHHHHHHHHCCCCCGGGEEEESSHHHHHHHHHHHSSEEEECC-------CEEEEEEEESSSSCCG
T ss_pred hccCCCCCCHHHHHHHHHHHHhhcCCCCCHHHEEEecCcHHHHHHHHHHHhCCCccccccccccccccceEEEeCCCCcc
Confidence 457766 665 788888888766543 356777777899975 455778887 78775 89998
Q ss_pred cHHHHHh--hhcccCCcEEEEeCC----------CCHHHHHhh---hCCCceEEEEeCCCCCCccccc---HHHHHHHHH
Q 016612 105 GTDRLLS--RVTPKTGVVVKRVNT----------CDLDEVASA---IGPWTKLVWVESPTNPRQQICD---IRKIAEMAH 166 (386)
Q Consensus 105 ~~~~~~~--~~~~~~g~~~~~v~~----------~d~~~l~~~---~~~~~~~v~~~~~~nptG~~~~---l~~i~~la~ 166 (386)
++..... ..+...|..++.++. .|+++|+++ +++++++|++++|+||||.+.+ +++|.++|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~nptG~~~~~~~l~~i~~~a~ 236 (444)
T 3if2_A 157 GYSDVHVEGQHFAAVLPHIDEVTHDGEEGFFKYRVDFEALENLPALKEGRIGAICCSRPTNPTGNVLTDEEMAHLAEIAK 236 (444)
T ss_dssp GGTTCCSSSCCEEECCCEEEEEEETTEEEEEEEECCHHHHHTCHHHHTTCEEEEEEESSCTTTCCCCCHHHHHHHHHHHH
T ss_pred chhhcccccchhhccCceEEecccccccCccccCCCHHHHHHHHHhcCCCceEEEeCCCCCCCCCcCCHHHHHHHHHHHH
Confidence 8742110 034566777777662 389999988 6789999999999999999998 889999999
Q ss_pred HcCCEEEEeCCCCCCCc----c--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhH
Q 016612 167 AHGALLLVDNSIMSPVL----S--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (386)
Q Consensus 167 ~~~~~li~D~a~~~~~~----~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (386)
++|+++|+|++|+.+.. . .+...+.+++++|+||+ +.+|+|+||++++ +.+.+.+.......+...++..+
T Consensus 237 ~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~i~~~S~sK~--~~~G~r~G~~~~~-~~l~~~~~~~~~~~~~~~~~~~~ 313 (444)
T 3if2_A 237 RYDIPLIIDNAYGMPFPNIIYSDAHLNWDNNTILCFSLSKI--GLPGMRTGIIVAD-AKVIEAVSAMNAVVNLAPTRFGA 313 (444)
T ss_dssp HTTCCEEEECTTCTTTTCCBCSCCCCCCCTTEEEEEESTTT--TCGGGCCEEEECC-HHHHHHHHHHHHHHHSSCCCHHH
T ss_pred HCCCEEEEECCCCCcccccccccccccCCCCEEEEechhhc--cCCCCceEEEEEC-HHHHHHHHHHHHhccCCCChHHH
Confidence 99999999999974321 1 11224678999999996 4457899999986 55666565554433333344444
Q ss_pred HHHHhcCCc--HHH-----HHHHHHHHHHHHHHHHhhC-CCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHh
Q 016612 241 WICLRGVKT--MAL-----RVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LAL 311 (386)
Q Consensus 241 ~~~~~~~~~--~~~-----~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~ 311 (386)
.++...+.. +.. ..+.+.++.+.+.+.+.+. +.+ ++.+. .+..+.++++.++. ...
T Consensus 314 ~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~------------~~~~~---~~~~g~~~~~~~~~~~~~ 378 (444)
T 3if2_A 314 AIATPLVANDRIKQLSDNEIKPFYQKQATLAVKLLKQALGDY------------PLMIH---KPEGAIFLWLWFKDLPIS 378 (444)
T ss_dssp HHHHHHHHTSHHHHHHHHTHHHHHHHHHHHHHHHHHHHSSSS------------SEEEE---CCCBSSEEEEEETTCSSC
T ss_pred HHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHhcccC------------CceEe---cCCccEEEEEEcCCCCCC
Confidence 433332221 111 1223444555555555542 211 11111 11235677777754 334
Q ss_pred HHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 312 SKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 312 ~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
...+.+.+...|+.+.+|..+..- .+ ... . ...+++||||++. +++++.++.|.+++++
T Consensus 379 ~~~l~~~l~~~gi~v~~g~~~~~~-~~---~~~-~--------~~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 439 (444)
T 3if2_A 379 TLDLYERLKAKGTLIVPSEYFFPG-VD---VSD-Y--------QHAHECIRMSIAADEQTLIDGIKVIGEVVRE 439 (444)
T ss_dssp HHHHHHHHHHTTEECEEGGGSCTT-CC---CTT-C--------SGGGSEEEEESSSCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCeEEecchhhcCC-CC---Ccc-c--------ccCCCeEEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 667777777789988877653210 00 000 0 0013679999975 6677778888877754
No 125
>3dr4_A Putative perosamine synthetase; deoxysugar, pyridoxal phosphate, aspartate aminotransferase, O-antigen; HET: G4M; 1.60A {Caulobacter crescentus} PDB: 3dr7_A* 3bn1_A*
Probab=99.93 E-value=2.8e-24 Score=201.44 Aligned_cols=305 Identities=17% Similarity=0.168 Sum_probs=204.2
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+...++++.+++++|.++.+++++|++|+. ++.++ +++||+|++++++|+++.. .++..|.+++.++.+
T Consensus 55 ~~~~~~l~~~la~~~~~~~~i~~~~gt~al~~~l~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~ 130 (391)
T 3dr4_A 55 GRFIVEFEKAFADYCGVKHAIACNNGTTALHLALVAMGIGPGDEVIVPSLTYIASAN----SVTYCGATPVLVDNDPRTF 130 (391)
T ss_dssp SHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTC
T ss_pred ChHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCchHHHHH----HHHHCCCEEEEEecCcccc
Confidence 3578899999999999999999999999987 45556 7999999999999999864 445678999988865
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCC--CCCccEEEeccc--cc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL--ELGADIVMHSAT--KF 201 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~--~~~~di~~~S~s--K~ 201 (386)
|++++++.+++++++|+ ++||||.+.|+++|.++|+++|+++|+|++|+.+...... ..-.|+++.|++ |+
T Consensus 131 ~~d~~~l~~~~~~~~~~v~---~~n~tG~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~di~~~S~s~~K~ 207 (391)
T 3dr4_A 131 NLDAAKLEALITPRTKAIM---PVHLYGQICDMDPILEVARRHNLLVIEDAAEAVGATYRGKKSGSLGDCATFSFFGNAI 207 (391)
T ss_dssp SBCGGGSGGGCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECBTTSS
T ss_pred CcCHHHHHHhcCCCceEEE---EECCCCChhhHHHHHHHHHHcCCEEEEECcccccceECCeeecccCCEEEEECCCCCc
Confidence 88999999998999888 6789999999999999999999999999999876643222 122478888855 99
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcC--------------CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEG--------------SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 267 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 267 (386)
+++ | ++|+++.+++.+.+.+........ ..+....+.+....+..+....++..++.+.+.+.
T Consensus 208 l~~--g-~gg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~l~aa~~~~~~~~~~~~~~~~~~~~~~l~~~ 284 (391)
T 3dr4_A 208 ITT--G-EGGMITTNDDDLAAKMRLLRGQGMDPNRRYWFPIVGFNYRMTNIQAAIGLAQLERVDEHLAARERVVGWYEQK 284 (391)
T ss_dssp SCC--B-SCEEEEESCHHHHHHHHHHHBTTCCTTSTTCCSSCCCBCBCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHH
T ss_pred CCc--C-CeEEEEECCHHHHHHHHHHHhcCCCCCCcccccccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 854 2 479998887777666655443221 23344444444444444555556666666677777
Q ss_pred HhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhcCcceeccCCCCcccccccccccc--C
Q 016612 268 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFMS--H 343 (386)
Q Consensus 268 l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~--~ 343 (386)
+.+. .+. ........ .......++++.+++ ....+++.+.+...|+.+++|... ..+.|.+.. .
T Consensus 285 L~~~-g~~-~~~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~GI~v~~~~~p-~~~~~~~~~~~~ 352 (391)
T 3dr4_A 285 LARL-GNR-VTKPHVAL---------TGRHVFWMYTVRLGEGLSTTRDQVIKDLDALGIESRPVFHP-MHIMPPYAHLAT 352 (391)
T ss_dssp HGGG-TTS-EECCCCCT---------TSCCCCSSEEEEECSSCSSCHHHHHHHHHHTTCCCEECCCC-GGGSGGGGGGCC
T ss_pred hhcC-Ccc-ccCcCCCC---------CCcceeEEEEEEECCccchhHHHHHHHHHHCCCceeecCCc-cccChhhhhcCc
Confidence 7654 211 11100000 001223456777654 334667888887788887766421 222332211 1
Q ss_pred CCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHhcC
Q 016612 344 ASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 344 ~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~~~ 384 (386)
..++..... ....+|++++....++.++.+.++|+++
T Consensus 353 ~~~~~~~~~----~~~~lrl~~~~~~t~edi~~~~~~l~~~ 389 (391)
T 3dr4_A 353 DDLKIAEAC----GVDGLNLPTHAGLTEADIDRVIAALDQV 389 (391)
T ss_dssp TTCHHHHHH----HHHEEEECCCTTCCHHHHHHHHHHHHTT
T ss_pred CCChHHHHH----HhCeEEccCCCCCCHHHHHHHHHHHHHH
Confidence 222222111 1356999998777777777777777654
No 126
>3f6t_A Aspartate aminotransferase; YP_194538.1, STRU genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: LLP; 2.15A {Lactobacillus acidophilus ncfm}
Probab=99.93 E-value=3.9e-25 Score=214.84 Aligned_cols=165 Identities=18% Similarity=0.226 Sum_probs=127.4
Q ss_pred CC-CCc-hHHHHHHHHHhhcCC-------CceEEeCcHHHHHHHH-HH-----hcCCCCEEEecCCCCCcHHHHHhhhcc
Q 016612 51 RS-GNP-TRDALESLLAKLDKA-------DRALCFTSGMAALAAV-TH-----LLGTGEEIVAGDDLYGGTDRLLSRVTP 115 (386)
Q Consensus 51 ~~-g~~-~~~~l~~~l~~~~g~-------~~~i~~~~gt~al~~~-~~-----~~~~g~~Vlv~~~~~~~~~~~~~~~~~ 115 (386)
+. |.+ +++++.+.+.+.++. ++.+++++|++++..+ .+ ++++||+|++++|+|.++. ..++
T Consensus 136 ~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~l~~~~l~~~gd~Viv~~p~~~~~~----~~~~ 211 (533)
T 3f6t_A 136 PDRCLVNTEKIINYFLQELSYKDANLAEQTDLFPTEGGTAAIVYAFHSLAENHLLKKGDKIAINEPIFTPYL----RIPE 211 (533)
T ss_dssp SSSCCHHHHHHHHHHHHHHHTTTCCCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEESSCCHHHH----TSGG
T ss_pred CcccHHHHHHHHHHHHHHhcCCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhccCCcCEEEEcCCCcHHHH----HHHH
Confidence 44 665 788888888766232 2455555556998754 44 6899999999999998874 5666
Q ss_pred cCCcEEEEeCCC---------CHHHHHhhhCCCceEEEEeCCCCCCcccccHH---HHHHHHH-HcCCEEEEeCCCCCCC
Q 016612 116 KTGVVVKRVNTC---------DLDEVASAIGPWTKLVWVESPTNPRQQICDIR---KIAEMAH-AHGALLLVDNSIMSPV 182 (386)
Q Consensus 116 ~~g~~~~~v~~~---------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~---~i~~la~-~~~~~li~D~a~~~~~ 182 (386)
..|.+++.++.. |++++++.+++++++|++++|+||||.+.+.+ +|+++|+ ++|+++|+|++|+...
T Consensus 212 ~~g~~~~~v~~~~~~~~~~~~d~~~l~~~l~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~la~~~~~~~li~De~y~~~~ 291 (533)
T 3f6t_A 212 LKDYELVEVDLHSYEKNDWEIEPNEIEKLKDPSIKALIVVNPTNPTSKEFDTNALNAIKQAVEKNPKLMIISDEVYGAFV 291 (533)
T ss_dssp GGGSEEEEECCCEETTTTSEECHHHHHHHSCTTEEEEEEESSCTTTCBCCCHHHHHHHHHHHHHCTTCEEEEECTTGGGS
T ss_pred HcCCeEEEEEecCCcccCCCCCHHHHHHHhCCCCeEEEEeCCCCCCccccCHHHHHHHHHHHHhCCCCEEEEcCCccccc
Confidence 778888877753 89999999999999999999999999998754 8888888 5899999999987432
Q ss_pred cc--CC--CCCCccEEEeccccccccCCCceEEEEEEcChhH
Q 016612 183 LS--RP--LELGADIVMHSATKFIAGHSDVMAGVLAVKGERL 220 (386)
Q Consensus 183 ~~--~~--~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~ 220 (386)
.. .. ...+.+++++|+||.+ |++|+|+||++++++.+
T Consensus 292 ~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~RiG~l~~~~~~~ 332 (533)
T 3f6t_A 292 PNFKSIYSVVPYNTMLVYSYSKLF-GCTGWRLGVIALNEKNV 332 (533)
T ss_dssp TTCCCHHHHSGGGEEEEEESHHHH-TCGGGCEEEEEEESSCH
T ss_pred cCccCHhhcCCCCEEEEecCcccC-CCcccceEEEEECcHHH
Confidence 21 11 1125679999999999 56689999999987633
No 127
>3ruy_A Ornithine aminotransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha and beta protein; HET: LLP; 2.65A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.93 E-value=4.1e-25 Score=207.18 Aligned_cols=278 Identities=15% Similarity=0.158 Sum_probs=185.8
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHhcC----------CCCEEEecCCCCCcHHHHHhhhccc------
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLG----------TGEEIVAGDDLYGGTDRLLSRVTPK------ 116 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~~~----------~g~~Vlv~~~~~~~~~~~~~~~~~~------ 116 (386)
.+.+.++++++++++|.++.++++||++|+.+ +..+.. .||+|++..++|++...........
T Consensus 77 ~~~~~~l~~~la~~~g~~~v~~~~~gt~a~~~al~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (392)
T 3ruy_A 77 SDQLGPWYEKVAKLTNKEMVLPMNTGAEAVETAIKTARRWAYDVKKVEANRAEIIVCEDNFHGRTMGAVSMSSNEEYKRG 156 (392)
T ss_dssp ETTHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTCCCCSSHHHHHTCSCTTTTTT
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCcHHHHHHHHHHHHHHhhhhccCCCCCCcEEEEEcCCcCCCCHhhhhccCChhhccc
Confidence 45899999999999998889999999999874 433332 3679999999997664332222111
Q ss_pred ---CCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc----
Q 016612 117 ---TGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---- 184 (386)
Q Consensus 117 ---~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~---- 184 (386)
....+..++..|++++++++++++++|++++++||||.+.| +++|.++|++||+++|+||+|+ .+...
T Consensus 157 ~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~i~~l~~~~~~~li~De~~~~~~~~g~~~~ 236 (392)
T 3ruy_A 157 FGPMLPGIIVIPYGDLEALKAAITPNTAAFILEPIQGEAGINIPPAGFLKEALEVCKKENVLFVADEIQTGLGRTGKVFA 236 (392)
T ss_dssp CCSCCSSEEEECTTCHHHHHHHCCTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTTTSSSSG
T ss_pred cCCCCCCCeeeCcccHHHHHHHhccCeEEEEEeCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeechhCCCccccchh
Confidence 01236667777999999999999999999999999999998 9999999999999999999995 22211
Q ss_pred -CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHH
Q 016612 185 -RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDN 260 (386)
Q Consensus 185 -~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 260 (386)
+......|++ |+||+++| | +|+|++++++ ++.+.+...........++..+.++...++.+. ...++..++
T Consensus 237 ~~~~~~~~d~~--~~SK~l~g--G~~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 311 (392)
T 3ruy_A 237 CDWDNVTPDMY--ILGKALGG--GVFPISCAAANR-DILGVFEPGSHGSTFGGNPLACAVSIAALEVLEEEKLTERSLQL 311 (392)
T ss_dssp GGGGTCCCSEE--EECGGGGT--TTSCCEEEEECH-HHHTTCCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHH
T ss_pred hhccCCCCCEE--EEchhhhC--ChhhhEEEEECH-HHHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 1112345776 55799865 5 7899999874 454444333333344566666666655554332 122333444
Q ss_pred HHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 261 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 261 ~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
.+.+.+.+++.. . +.. ....+.+.++++.++. ...++.+.+...|+.+++|.
T Consensus 312 ~~~l~~~L~~~~---------~---~~~----~~~~~~g~~~~~~~~~--~~~~l~~~l~~~gi~v~~~~---------- 363 (392)
T 3ruy_A 312 GEKLVGQLKEID---------N---PMI----TEVRGKGLFIGIELNE--PARPYCEQLKAAGLLCKETH---------- 363 (392)
T ss_dssp HHHHHHHHTTCC---------C---TTE----EEEEEETTEEEEEESS--CSHHHHHHHHTTTEECCCBT----------
T ss_pred HHHHHHHHHHhc---------C---CCc----eEEEeeeeEEEEEEcc--hHHHHHHHHHHCCcEEecCC----------
Confidence 444444444321 0 111 1113357888888865 35667777777788776543
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 381 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 381 (386)
++++|++++. ++++++++.|++++
T Consensus 364 -----------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 391 (392)
T 3ruy_A 364 -----------------ENVIRIAPPLVISEEDLEWAFQKIKAVL 391 (392)
T ss_dssp -----------------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred -----------------CCEEEEECCCCCCHHHHHHHHHHHHHHh
Confidence 3559999653 66666777776665
No 128
>1jg8_A L-ALLO-threonine aldolase; glycine biosynthesis, pyridoxal-5'- phosphate, calcium binding site, structural genomics, PSI; HET: LLP; 1.80A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1lw4_A* 1lw5_A* 1m6s_A* 2fm1_A*
Probab=99.93 E-value=2.2e-25 Score=205.44 Aligned_cols=281 Identities=19% Similarity=0.205 Sum_probs=182.6
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC----CC
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CD 128 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~d 128 (386)
.+...++++.+++++|.++.+++++|++++. ++.+++++||+|++++|+|.++... ...+...|.+++.+.. .|
T Consensus 37 ~~~~~~l~~~la~~~g~~~~~~~~~gt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~d 115 (347)
T 1jg8_A 37 DPTINELERLAAETFGKEAALFVPSGTMGNQVSIMAHTQRGDEVILEADSHIFWYEV-GAMAVLSGVMPHPVPGKNGAMD 115 (347)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHCCTTCEEEEETTCHHHHSST-THHHHHTCCEEEEECEETTEEC
T ss_pred ChHHHHHHHHHHHHhCCceEEEecCcHHHHHHHHHHhcCCCCEEEEcCcchhhhccc-cchhhccCeEEEEecCCCCccC
Confidence 3567789999999999998999999998875 5566789999999999998654311 0134557888887721 28
Q ss_pred HHHHHhhhCC------CceEEEEeCCCCCC-ccccc---HHHHHHHHHHcCCEEEEeCCCCCCC---cc-CC--CCCCcc
Q 016612 129 LDEVASAIGP------WTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMSPV---LS-RP--LELGAD 192 (386)
Q Consensus 129 ~~~l~~~~~~------~~~~v~~~~~~npt-G~~~~---l~~i~~la~~~~~~li~D~a~~~~~---~~-~~--~~~~~d 192 (386)
++++++++++ ++++|++++|+||| |.+.| +++|.++|+++|+++|+|+++..+. .. +. ...+.|
T Consensus 116 ~~~l~~~i~~~~~~~~~~~~v~~~~~~npt~G~~~~~~~l~~i~~~a~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d 195 (347)
T 1jg8_A 116 PDDVRKAIRPRNIHFPRTSLIAIENTHNRSGGRVVPLENIKEICTIAKEHGINVHIDGARIFNASIASGVPVKEYAGYAD 195 (347)
T ss_dssp HHHHHHHSCCSCTTSCCEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCEEEEEETTHHHHHHHHCCCHHHHHHTCS
T ss_pred HHHHHHHhccccccccCceEEEEeccccccCCccCcHHHHHHHHHHHHHCCCEEEeehhhhhcchhhcCCChHHhccccc
Confidence 9999999875 68999999999999 99876 5789999999999999999874321 11 11 112578
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCC--CChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhh
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG--LAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 270 (386)
.++.|+||+++++. +++++.+ +++.+.+.......+.+ .+...+.+...+++....++.+..++.+.+.+.|++
T Consensus 196 ~~~~s~sK~l~~~~---G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 271 (347)
T 1jg8_A 196 SVMFCLSKGLCAPV---GSVVVGD-RDFIERARKARKMLGGGMRQAGVLAAAGIIALTKMVDRLKEDHENARFLALKLKE 271 (347)
T ss_dssp EEEEESSSTTCCSS---CEEEEEC-HHHHHHHHHHHHHHTCCCSSTHHHHHHHHHHHHHSSTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEecccccCCCc---eEEEEcC-HHHHHHHHHHHHHcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88889999996542 4566655 55555444433322222 222333322222211111223333455666666654
Q ss_pred CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHH
Q 016612 271 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVE 349 (386)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~ 349 (386)
.. +. +... +..++++++.++. .....++.+.+...|+.+++++
T Consensus 272 ~~---------~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~------------------- 315 (347)
T 1jg8_A 272 IG---------YS------VNPE--DVKTNMVILRTDNLKVNAHGFIEALRNSGVLANAVS------------------- 315 (347)
T ss_dssp HT---------CB------CCGG--GCCSSEEEEECTTSSSCHHHHHHHHHHHTEECEEEE-------------------
T ss_pred cC---------ce------eccC--CCcceEEEEEcccccCCHHHHHHHHHHCCCEEecCC-------------------
Confidence 31 11 0000 1246778888753 2235677777777788765321
Q ss_pred HHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 350 VRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 350 ~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
++++|++++ .++++++++.|++++++
T Consensus 316 --------~~~iRl~~~~~~~~e~i~~~~~~l~~~l~~ 345 (347)
T 1jg8_A 316 --------DTEIRLVTHKDVSRNDIEEALNIFEKLFRK 345 (347)
T ss_dssp --------TTEEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred --------CCeEEEEeCCCCCHHHHHHHHHHHHHHHHh
Confidence 345999985 37777788888777654
No 129
>4f4e_A Aromatic-amino-acid aminotransferase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: LLP; 1.80A {Burkholderia pseudomallei} PDB: 4eff_A*
Probab=99.93 E-value=1.6e-24 Score=205.04 Aligned_cols=172 Identities=18% Similarity=0.122 Sum_probs=132.5
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcC----CC--ceEEeCcHHHHHHHH---HHhcCCCCEEEecCCCCCcHHHHHhhh
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDK----AD--RALCFTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRV 113 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~--~~i~~~~gt~al~~~---~~~~~~g~~Vlv~~~~~~~~~~~~~~~ 113 (386)
....|... |.+ +++++.+++....+ .+ +.+++++|++++.++ ++++++||+|++++|+|.++. ..
T Consensus 84 ~~~~Y~~~~g~~~lr~~ia~~l~~~~~~~~~~~~~~i~~t~G~t~al~~~~~~~~~~~~gd~Vlv~~p~~~~~~----~~ 159 (420)
T 4f4e_A 84 LPRGYLPIDGIAAYDASVQKLLLGDDSPLIAAGRVVTAQALGGTGALKIGADFLRTLNPKAKVAISDPSWENHR----AL 159 (420)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH----HH
T ss_pred CCCCCCCCCCcHHHHHHHHHHhcCCCccccccCceEEEECCccHHHHHHHHHHHHHhCCCCEEEEeCCCcHhHH----HH
Confidence 44567776 775 78888888876654 33 445556667998754 456899999999999999885 44
Q ss_pred cccCCcEEEEeCC----C---CHHHHHhhhC---CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCC
Q 016612 114 TPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMS 180 (386)
Q Consensus 114 ~~~~g~~~~~v~~----~---d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~ 180 (386)
++..|.+++.++. . |++++++.++ ++++++++++|+||||.+.+ +++|+++|+++|+++|+|++|+.
T Consensus 160 ~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~i~~p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~ 239 (420)
T 4f4e_A 160 FDMAGFEVVAYPYYDAKTNGVNFDGMLAALNGYEPGTIVVLHACCHNPTGVDLNDAQWAQVVEVVKARRLVPFLDIAYQG 239 (420)
T ss_dssp HHHTTCCEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTT
T ss_pred HHHcCCeEEEeeeeccccCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCcEEEEcccccc
Confidence 5577888888876 2 8999999987 67899999999999999975 77899999999999999999864
Q ss_pred CCccC----------CCCCCccEEEeccccccccCCCceEEEEEE--cChhHH
Q 016612 181 PVLSR----------PLELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLA 221 (386)
Q Consensus 181 ~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~G~i~~--~~~~~~ 221 (386)
..+.. ....+.++++.|+||.+ |++|+|+||+++ +++++.
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~RiG~~~~~~~~~~~~ 291 (420)
T 4f4e_A 240 FGESIEADAAAVRLFAAANLNVFVSSSFSKSF-SLYGERVGALSIITDSKDEA 291 (420)
T ss_dssp SSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCEEEEEEECSSHHHH
T ss_pred ccCCcchhhHHHHHHHhcCCCEEEEEeCCccC-cCcCCCcEEEEEEcCCHHHH
Confidence 43320 01235689999999999 566899999864 344443
No 130
>3b1d_A Betac-S lyase; HET: PLP PLS EPE; 1.66A {Streptococcus anginosus} PDB: 3b1c_A* 3b1e_A*
Probab=99.88 E-value=6.5e-28 Score=226.30 Aligned_cols=297 Identities=13% Similarity=0.139 Sum_probs=190.4
Q ss_pred CccccCCCCchHHHHHHHHHhhcC--C--CceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 46 PYDYTRSGNPTRDALESLLAKLDK--A--DRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 46 ~~~y~~~g~~~~~~l~~~l~~~~g--~--~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
...|...-.++++++.+++.+.+| . ++.+++++|++++. ++..++++||+|++++|.|+++. ..++..|.+
T Consensus 61 ~~~y~~~~~~l~~~la~~l~~~~g~~~~~~~v~~~~g~~~a~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~ 136 (392)
T 3b1d_A 61 VYGYTYASDELLQAVLDWEKSEHQYSFDKEDIVFVEGVVPAISIAIQAFTKEGEAVLINSPVYPPFA----RSVRLNNRK 136 (392)
Confidence 445554422367777777777766 2 34555555568987 45557889999999999999885 455677888
Q ss_pred EEEeCC--------CCHHHHHhhhC-CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 121 VKRVNT--------CDLDEVASAIG-PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 121 ~~~v~~--------~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
++.++. .|++++++.++ +++++|++++|+||||.+.+ +++|.++|+++|+++|+||+|+.....
T Consensus 137 ~~~~~~~~~~g~~~~d~~~l~~~l~~~~~~~v~~~~~~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~g~~~ 216 (392)
T 3b1d_A 137 LVSNSLKEENGLFQIDFEQLENDIVENDVKLYLLCNPHNPGGRVWEREVLEQIGHLCQKHHVILVSDEIHQDLTLFGHEH 216 (392)
Confidence 877765 26788888887 68899999999999999986 899999999999999999998753221
Q ss_pred -CCC---C--CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcC-CCCChhhHHHHHhcCCcHHHHHHHH
Q 016612 185 -RPL---E--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG-SGLAPFDCWICLRGVKTMALRVEKQ 257 (386)
Q Consensus 185 -~~~---~--~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 257 (386)
... . .+.++++.|+||++ +.+|+|+|+++++++.+.+.+.......+ ...++..+.++...++..
T Consensus 217 ~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~r~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~------- 288 (392)
T 3b1d_A 217 VSFNTVSPDFKDFALVLSSATKTF-NIAGTKNSYAIIENPTLCAQFKHQQLVNNHHEVSSLGYIATETAYRYG------- 288 (392)
Confidence 111 1 35679999999999 44578999999876656655544433332 123444444433333311
Q ss_pred HHHHHHHHHHHhhCCCcceEecCCCCC-CCchhhhhhccCCCCceE-EEEeCCH-HhHHHHHhhcC-cceeccCCCCccc
Q 016612 258 QDNAQKIAEFLASHPRVKKVNYAGLPE-HPGHELHYSQAKGAGSVL-SFLTGSL-ALSKHVVETTK-YFSITVSFGSVKS 333 (386)
Q Consensus 258 ~~~~~~l~~~l~~~~~~~~~~~~~l~~-~~~~~i~~~~~~~~~~~~-~~~~~~~-~~~~~l~~~l~-~~gi~~~~G~~~~ 333 (386)
.+..+.+.+.+.+.. +.+...+.. ++++.+. .+.++++ ++.++.. .....+.+.+. ..|+.+.+|..+.
T Consensus 289 ~~~~~~~~~~~~~~~---~~l~~~l~~~~~~~~~~----~~~~~~~~~i~~~~~~~~~~~l~~~l~~~~gi~v~~g~~f~ 361 (392)
T 3b1d_A 289 KPWLVALKAVLEENI---QFAVEYFAQEAPRLKVM----KPQGTYLIWLDFSDYGLTDDALFTLLHDQAKVILNRGSDYG 361 (392)
Confidence 111222222222222 223333443 3444332 2234444 4566432 23556777774 6788887766421
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEec--cCChHHHHHHHHHHHh
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVG--IEDVNDLISDLDKALR 382 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--~~~~~~~i~~l~~~l~ 382 (386)
...++++||+++ .+++++.++.|+++++
T Consensus 362 ---------------------~~~~~~iRi~~~~~~e~i~~~l~~l~~~l~ 391 (392)
T 3b1d_A 362 ---------------------SEGELHARLNIAAPKSLVEEICKRIVCCLP 391 (392)
Confidence 012567999986 4778888888877765
No 131
>2oga_A Transaminase; PLP-dependent enzyme, desosamine, deoxysugars, antibiotics, hydrolase; HET: PGU; 2.05A {Streptomyces venezuelae} PDB: 2oge_A*
Probab=99.93 E-value=1.3e-24 Score=204.35 Aligned_cols=302 Identities=19% Similarity=0.214 Sum_probs=193.6
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
+...++++.+++++|.++.+++++|++++.. +.++ +++||+|+++.|+|+++.. .++..|.+++.++.+
T Consensus 63 ~~~~~l~~~la~~~~~~~~v~~~~Gt~a~~~~l~~~~~~~gd~vl~~~~~~~~~~~----~~~~~g~~~~~~~~~~~~~~ 138 (399)
T 2oga_A 63 PELEGFEAEFAAYCETDHAVGVNSGMDALQLALRGLGIGPGDEVIVPSHTYIASWL----AVSATGATPVPVEPHEDHPT 138 (399)
T ss_dssp HHHHHHHHHHHHHTTSSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHH----HHHHTTCEEEEECBCSSSSS
T ss_pred hhHHHHHHHHHHHHCCCeEEEecCHHHHHHHHHHHhCCCCcCEEEECCCccHHHHH----HHHHCCCEEEEEecCCCCCC
Confidence 5678899999999999889999999999874 5556 7899999999999998763 445678898888752
Q ss_pred -CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCC--ccEEEecc--cccc
Q 016612 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMHSA--TKFI 202 (386)
Q Consensus 128 -d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~--~di~~~S~--sK~~ 202 (386)
|++++++.+++++++|+ ++||||.+.|+++|.++|+++|+++|+|++|+.+...+....+ .|++++|+ +|++
T Consensus 139 ~d~~~l~~~i~~~~~~v~---~~n~tG~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~~~sK~~ 215 (399)
T 2oga_A 139 LDPLLVEKAITPRTRALL---PVHLYGHPADMDALRELADRHGLHIVEDAAQAHGARYRGRRIGAGSSVAAFSFYPGKNL 215 (399)
T ss_dssp BCHHHHHHHCCTTEEEEC---CBCGGGCCCCHHHHHHHHHHHTCEECEECTTCTTCEETTEETTCTTCEEEEECCTTSSS
T ss_pred cCHHHHHHhcCCCCeEEE---EeCCcCCccCHHHHHHHHHHcCCEEEEECcccccCccCCeecccccCEEEEeCCCCccC
Confidence 78999999988898887 6789999999999999999999999999999876533222223 69999999 6999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhc----------C--CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhh
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAE----------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~----------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 270 (386)
+ ++| ++|+++++++++.+.+....... + ...++...+++..+++.+....++..++.+.+.+.+++
T Consensus 216 ~-~~G-~~g~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~~~~~l~~~L~~ 293 (399)
T 2oga_A 216 G-CFG-DGGAVVTGDPELAERLRMLRNYGSRQKYSHETKGTNSRLDEMQAAVLRIRLAHLDSWNGRRSALAAEYLSGLAG 293 (399)
T ss_dssp C-CSS-CCEEEEESCHHHHHHHHHHHBTTCSSTTCCCSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTT
T ss_pred C-cCC-ceEEEEeCCHHHHHHHHHHHhcCccccccccccccCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 4 445 78999987667766665543321 1 23456666665555555544444445555555555544
Q ss_pred CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccC----CCC
Q 016612 271 HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH----ASI 346 (386)
Q Consensus 271 ~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~----~~~ 346 (386)
.+ +..+..........++.+.+... ...++.+.+...|+.++.+........|..... ..+
T Consensus 294 ~~--------------g~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~L~~~gI~v~~~~~~~~~~~~~~~~~~~~~~~~ 358 (399)
T 2oga_A 294 LP--------------GIGLPVTAPDTDPVWHLFTVRTE-RRDELRSHLDARGIDTLTHYPVPVHLSPAYAGEAPPEGSL 358 (399)
T ss_dssp CT--------------TCBCCCCCTTEECCCSSEEEECS-SHHHHHHHHHHTTBCCBCSCSSCGGGSHHHHTTSCCTTSC
T ss_pred CC--------------CccccCCCCCCcceeEEEEEECC-CHHHHHHHHHHCCCceecCCCCccccchhhcccCCCCCCC
Confidence 32 11111000001111112333211 245666666667887665431111101100000 000
Q ss_pred CHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 347 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
+.... ...+++||+++. ++++++++.|+++++++
T Consensus 359 p~~~~----~~~~~lRi~~~~~~t~edi~~~~~~l~~~~~~l 396 (399)
T 2oga_A 359 PRAES----FARQVLSLPIGPHLERPQALRVIDAVREWAERV 396 (399)
T ss_dssp HHHHH----HHHHEEEECCSTTCCHHHHHHHHHHHHHHHHSC
T ss_pred hhHHH----HHhCEEEccCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 00000 012569999964 67777777777777654
No 132
>3k7y_A Aspartate aminotransferase; aminotrans pyridoxal phosphate; HET: PLP; 2.80A {Plasmodium falciparum} SCOP: c.67.1.0
Probab=99.93 E-value=7.8e-25 Score=205.18 Aligned_cols=173 Identities=16% Similarity=0.121 Sum_probs=130.1
Q ss_pred CCCccccCC-CCc-hHHHHHHHHHhhcCCC----c--eEEeCcHHHHHHHH-HHhcC--CCCEEEecCCCCCcHHHHHhh
Q 016612 44 NGPYDYTRS-GNP-TRDALESLLAKLDKAD----R--ALCFTSGMAALAAV-THLLG--TGEEIVAGDDLYGGTDRLLSR 112 (386)
Q Consensus 44 ~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~----~--~i~~~~gt~al~~~-~~~~~--~g~~Vlv~~~~~~~~~~~~~~ 112 (386)
...++|.+. |.+ +|+++.+++....+.. + .+++++|++|+..+ ..+++ | |+|++++|+|+++. .
T Consensus 63 ~~~~~Y~~~~G~~~lr~aia~~~~~~~~~~~~~~~i~i~~t~G~~~al~~~~~~l~~~~~-d~Vlv~~P~y~~~~----~ 137 (405)
T 3k7y_A 63 YKEKPYLLGNGTEDFSTLTQNLIFGNNSKYIEDKKICTIQCIGGTGAIFVLLEFLKMLNV-ETLYVTNPPYINHV----N 137 (405)
T ss_dssp CCCCCCCTTSSCHHHHHHHHHHHHCSSCTTTTTTCEEEEEEEHHHHHHHHHHHHHHTTTC-CEEEEESSCCHHHH----H
T ss_pred CCCCCCCCCCCcHHHHHHHHHHHcCCCCccccccceEEEEcCchHHHHHHHHHHHHhcCC-CEEEEeCCCCHhHH----H
Confidence 456789987 887 8999999887655432 2 24555556898754 44555 8 99999999999885 5
Q ss_pred hcccCCcEEEEeCCC-------CHHHHHhhhC--CCceEEEEeCC-CCCCccccc---HHHHHHHHHHcCCEEEEeCCCC
Q 016612 113 VTPKTGVVVKRVNTC-------DLDEVASAIG--PWTKLVWVESP-TNPRQQICD---IRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 113 ~~~~~g~~~~~v~~~-------d~~~l~~~~~--~~~~~v~~~~~-~nptG~~~~---l~~i~~la~~~~~~li~D~a~~ 179 (386)
+++..|.+++.++.. |++++++.++ ++++++++++| |||||.+++ +++|+++|++||+++|+||+|.
T Consensus 138 ~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~i~l~~~~~NPTG~~~s~~~~~~l~~~~~~~~~~vi~De~Y~ 217 (405)
T 3k7y_A 138 MIESRGFNLKYINFFDYNLIDINYDLFLNDLRNIPNGSSVILQISCYNPCSVNIEEKYFDEIIEIVLHKKHVIIFDIAYQ 217 (405)
T ss_dssp HHHTTTCEEEEECCEETTTTEECHHHHHHHHHHSCSSCEEEECCSSCTTTCCCCCHHHHHHHHHHHHHHCCEEEEEESCT
T ss_pred HHHHcCCeEEEEeccccccCCcCHHHHHHHHHhCCCCeEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCeEEEEecCcc
Confidence 567899999998761 7899998886 46788888765 899999986 7789999999999999999986
Q ss_pred CCCccC------C-----CCCCccEEEeccccccccCCCceEEEEEE--cChhHHH
Q 016612 180 SPVLSR------P-----LELGADIVMHSATKFIAGHSDVMAGVLAV--KGERLAK 222 (386)
Q Consensus 180 ~~~~~~------~-----~~~~~di~~~S~sK~~~g~~g~~~G~i~~--~~~~~~~ 222 (386)
.-.... . ...+..+++.|+||.| +.+|+|+||+++ .++++.+
T Consensus 218 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~l~GlRiG~~~~~~~~~~~~~ 272 (405)
T 3k7y_A 218 GFGHTNLEEDVLLIRKFEEKNIAFSVCQSFSKNM-SLYGERAGALHIVCKNQEEKK 272 (405)
T ss_dssp TTSSSSTTGGGHHHHHHHTTTCCEEEEEECTTTS-CCTTTTEEEEEEECSSHHHHH
T ss_pred cccCCCcccchHHHHHHHhcCCcEEEEeeCCccC-CCccccceEEEEEeCCHHHHH
Confidence 422210 0 1124679999999999 566899999864 4454443
No 133
>3ht4_A Aluminum resistance protein; lyase, putative cystathionine BEAT-lyase, aluminium resistance protein, Q81A77_baccr, NESG, BCR213; 2.90A {Bacillus cereus atcc 14579}
Probab=99.93 E-value=1.8e-24 Score=204.12 Aligned_cols=254 Identities=19% Similarity=0.200 Sum_probs=191.4
Q ss_pred chHHHHHHHHHhhcCCCceEE---eCcHHHHHH-HHHHhcCCCCEEEecC-CCCCcHHHHHh------hhcccCCcEEEE
Q 016612 55 PTRDALESLLAKLDKADRALC---FTSGMAALA-AVTHLLGTGEEIVAGD-DLYGGTDRLLS------RVTPKTGVVVKR 123 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~---~~~gt~al~-~~~~~~~~g~~Vlv~~-~~~~~~~~~~~------~~~~~~g~~~~~ 123 (386)
+.++++++.+++++|.+...+ ++||++|+. ++.+++++||+|++++ +.|+++...+. ..++..|++++.
T Consensus 65 ~~~~~l~~~la~~~g~~~~~~~i~~~sGt~Ai~~al~al~~~Gd~Vl~~~~~~y~~~~~~~~l~g~~~~~~~~~G~~~~~ 144 (431)
T 3ht4_A 65 IGRDTLEKVYADVFGAEAGLVRPQIISGTHAISTALFGILRPGDELLYITGKPYDTLEEIVGVRGKGVGSFKEYNIGYNA 144 (431)
T ss_dssp HHHHHHHHHHHHHTTCSEECCBTTSCSHHHHHHHHHHTTCCTTCEEEECSSSCCTTHHHHTTSSSCSSSCSGGGTCEEEE
T ss_pred hhHHHHHHHHHHHhCCCcccccceeeCHHHHHHHHHHHhCCCCCEEEEeCCCCchhHHHHHhhcccccchHHHcCCEEEE
Confidence 468999999999999986555 789999987 5566899999999998 99998865432 345678999999
Q ss_pred eCCC-----CHHHHHhhhCCCceEEEEeC-CCCCCccc---ccHHHHHHHHHH--cCCEEEEeCCCCCCCc-cCCCCCCc
Q 016612 124 VNTC-----DLDEVASAIGPWTKLVWVES-PTNPRQQI---CDIRKIAEMAHA--HGALLLVDNSIMSPVL-SRPLELGA 191 (386)
Q Consensus 124 v~~~-----d~~~l~~~~~~~~~~v~~~~-~~nptG~~---~~l~~i~~la~~--~~~~li~D~a~~~~~~-~~~~~~~~ 191 (386)
++.+ |++++++++++++++|++++ |+||+|.. .++++|.++|++ +|+++|+|++|+.+.. ..+...++
T Consensus 145 v~~~~~~~~d~e~l~~~l~~~tk~V~i~~sp~np~~~~~~~~~l~~i~~la~~~~~~~~livDea~~~~~~~~~~~~~g~ 224 (431)
T 3ht4_A 145 VPLTEGGLVDFEAVAAAIHSNTKMIGIQRSKGYATRPSFTISQIKEMIAFVKEIKPDVVVFVDNCYGEFIEEQEPCHVGA 224 (431)
T ss_dssp CCBCTTSSBCHHHHHHHCCTTEEEEEEECSCTTSSSCCCCHHHHHHHHHHHHHHCTTCEEEEECTTCTTSSSCCGGGTTC
T ss_pred eCCCCCCCcCHHHHHhhcCCCCeEEEEECCCCCCCCCcCCHHHHHHHHHHHHhhCCCCEEEEeCCChhhccCCCccccCC
Confidence 9974 99999999999999999995 66666655 479999999999 9999999999987764 45666789
Q ss_pred cEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCC----CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 016612 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS----GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEF 267 (386)
Q Consensus 192 di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 267 (386)
|++++|++|+++|..++.+|+++++ +++.+.+.......+. +.+....+++..++..+..+.++..++++.+.+.
T Consensus 225 Di~~~S~sK~lgg~~~~~GG~v~~~-~~li~~l~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~a~~l~~~ 303 (431)
T 3ht4_A 225 DLMAGSLIKNPGGGIVKTGGYIVGK-EQYVEACAYRLTSPGIGAEAGASLYSLQEMYQGFFLAPHVAGQALKGAIFTAAF 303 (431)
T ss_dssp SEEEEETTSGGGTTTCSSCEEEEEC-HHHHHHHHHHHSCTTTTTSCSCCCSCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEcCccccCCCCCCCceEEEEec-HHHHHHHHHHhccCCcccccCccHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999877444556999987 5565555543332221 1222224555666666778888899999999999
Q ss_pred HhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcce
Q 016612 268 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFS 323 (386)
Q Consensus 268 l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g 323 (386)
+++.+. .+ .+. .+. +..+.++++.+++.+...++++.+....
T Consensus 304 L~~~g~--~v-~p~-~~~----------~~~~li~~i~l~~~~~~~~~~~~l~~~~ 345 (431)
T 3ht4_A 304 LEKLGM--NT-SPA-WNA----------PRTDLIQSVQFDDKDRMIAFCQAIQYAS 345 (431)
T ss_dssp HHHHTC--CE-ESC-TTS----------CCSSSCCEEECCCHHHHHHHHHHHHHTS
T ss_pred HHhCcC--Ee-cCC-CCC----------CCccEEEEEEeCCHHHHHHHHHHHHhcC
Confidence 987652 11 222 221 2234578888888777888888887764
No 134
>4eu1_A Mitochondrial aspartate aminotransferase; ssgcid, structural genomics, SEA structural genomics center for infectious disease; HET: LLP; 2.30A {Trypanosoma brucei}
Probab=99.93 E-value=1e-23 Score=198.75 Aligned_cols=251 Identities=15% Similarity=0.117 Sum_probs=160.8
Q ss_pred ceeeccCCCCCC-CCCcccceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcC----CCce--EEeCcHHH
Q 016612 11 TLLMNFSNEFDP-YGALSTPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----ADRA--LCFTSGMA 81 (386)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~--i~~~~gt~ 81 (386)
..+++++ .+++ -...++++.++.. +......+.|.+. |.+ +++++.+++....+ .++. +.+.+|++
T Consensus 41 ~~~i~l~-~g~~~d~~~~~~v~~a~~----~a~~~~~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~~~~g~g 115 (409)
T 4eu1_A 41 KRKVNLS-IGVYRDDADQPFVLECVK----QATLGTNMDYAPVTGIASFVEEAQKLCFGPTCAALRDGRIASCQTLGGTG 115 (409)
T ss_dssp SSCEECC-CSSCCCTTSCCCCCHHHH----TCCCCSCCCCCCTTCCHHHHHHHHHHHHCSSCHHHHTTCEEEEEESHHHH
T ss_pred cCceeee-eeEEECCCCCEeecHHHH----hcCccccccCCCCCCcHHHHHHHHHHHcCCCchhhccCceeeeecccchH
Confidence 4678888 4454 2233444333211 1133455677765 665 66666666633222 2233 34677777
Q ss_pred HHHHH----HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-------CHHHHHhhhC---CCceEEEEeC
Q 016612 82 ALAAV----THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-------DLDEVASAIG---PWTKLVWVES 147 (386)
Q Consensus 82 al~~~----~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-------d~~~l~~~~~---~~~~~v~~~~ 147 (386)
++.++ ..++++||+|++++|+|.++. ..++..|.+++.++.. |++++++.++ ++++++++++
T Consensus 116 a~~~~~~~~~~~~~~gd~Vlv~~p~y~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~i~~~~ 191 (409)
T 4eu1_A 116 ALRIGGDLLNRFVANCNRIYGPDVGYPNHE----SIFAKAGMELTPYSYYDPATKGLNLAGMLECLDKAPEGSVILVHAC 191 (409)
T ss_dssp HHHHHHHHGGGTSSSCCEEEEESSCCTHHH----HHHHHTTCEEEEECCEETTTTEECHHHHHHHHHHSCTTCEEEEESS
T ss_pred HHHHHHHHHHHhcCCCCEEEEeCCCcHhHH----HHHHHcCCeEEEEEeecCcCCcCcHHHHHHHHHhCCCCcEEEEECC
Confidence 77643 235689999999999999886 4556788999998861 7899999885 3566777799
Q ss_pred CCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC----------C-CCCCccEEEeccccccccCCCceEEEE
Q 016612 148 PTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----------P-LELGADIVMHSATKFIAGHSDVMAGVL 213 (386)
Q Consensus 148 ~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~----------~-~~~~~di~~~S~sK~~~g~~g~~~G~i 213 (386)
|+||||.+.+ +++|.++|+++|+++|+||+|+...... . ...+.++++.|+||.+ |.+|+|+||+
T Consensus 192 p~NPtG~~~~~~~l~~i~~~~~~~~~~li~De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G~riG~~ 270 (409)
T 4eu1_A 192 AHNPTGVDPTHDDWRQVCDVIKRRNHIPFVDMAYQGFATGQLDYDAFVPRHLVDMVPNLIVAQSFSKNF-GLYGHRCGAL 270 (409)
T ss_dssp SCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTTTTSCHHHHTHHHHHHHTTSSCCEEEEECTTTS-SCGGGCCEEE
T ss_pred CCCCCCCCCCHHHHHHHHHHHHhCCcEEEEeccccccccCCcccchHHHHHHHhhCCcEEEEecCcccc-cCccCCceEE
Confidence 9999999987 5669999999999999999987543221 0 1224568999999999 5568999997
Q ss_pred --EEcChh----HHHHHHHhhhhcCCCCChhhHHHHHhcCCc----------HHHHHHHHHHHHHHHHHHHhhC
Q 016612 214 --AVKGER----LAKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 214 --~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~l~~~l~~~ 271 (386)
++.+++ +.+.+...........+...+.++...+.. +....+.+.++.+.+.+.+++.
T Consensus 271 ~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~ 344 (409)
T 4eu1_A 271 HISTASAEEAKRLVSQLALLIRPMYNNPPLYGAWVVSSILKDPQLTALWKKELKQMSSRIAEVRKRLVSELKAC 344 (409)
T ss_dssp EEECSSHHHHHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred EEEeCCHHHHHHHHHHHHHHHhhhcCCCChHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 666666 444444443333334445555554443332 2223344445555555555543
No 135
>4adb_A Succinylornithine transaminase; transferase, PLP enzymes, aminotransferase; HET: PLP; 2.20A {Escherichia coli} PDB: 4adc_A* 4add_A* 4ade_A
Probab=99.93 E-value=2.1e-25 Score=210.07 Aligned_cols=320 Identities=16% Similarity=0.167 Sum_probs=205.9
Q ss_pred eeeccCCCC---CCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHH-H
Q 016612 12 LLMNFSNEF---DPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALAAV-T 87 (386)
Q Consensus 12 ~~~~~~~~~---~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~-~ 87 (386)
..+++. .+ .++|..+|.+.++...... .....+.....+...++++++++++|.++.+++++|++|+.++ .
T Consensus 40 ~~lD~~-~~~~~~~lg~~~p~v~~a~~~~~~----~~~~~~~~~~~~~~~~l~~~la~~~~~~~v~~~~gg~~a~~~al~ 114 (406)
T 4adb_A 40 EYIDFA-GGIAVNALGHAHPELREALNEQAS----KFWHTGNGYTNEPVLRLAKKLIDATFADRVFFCNSGAEANEAALK 114 (406)
T ss_dssp EEEESS-HHHHTCTTCBTCHHHHHHHHHHHT----TCSCCCTTSCCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHH
T ss_pred EEEECC-CchhhcccCCCCHHHHHHHHHHHH----hcccccCCcCCHHHHHHHHHHHhhCCCCeEEEeCcHHHHHHHHHH
Confidence 355665 33 6677755554443211111 1111112224467899999999999999889999999998754 4
Q ss_pred HhcC-------CC-CEEEecCCCCCcHHHHHhhhc---------ccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 88 HLLG-------TG-EEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 88 ~~~~-------~g-~~Vlv~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
.++. +| |+|++.+|.|+++........ ...+.++..++..|++++++++++++++|+++ |+|
T Consensus 115 ~~~~~~~~~~~~g~~~vi~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~-p~n 193 (406)
T 4adb_A 115 LARKFAHDRYGSHKSGIVAFKNAFHGRTLFTVSAGGQPAYSQDFAPLPADIRHAAYNDINSASALIDDSTCAVIVE-PIQ 193 (406)
T ss_dssp HHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCGGGTGGGCSCCSSEEEECTTCHHHHHTTCSTTEEEEEEC-SEE
T ss_pred HHHHHHHhcCCCCCcEEEEECCCcCCCcHHHhhccCCccccccCCCCCCCceEeCCCcHHHHHHHhcCCeEEEEEe-CCc
Confidence 4443 55 999999999988743322221 12234677788889999999999999999999 899
Q ss_pred CCcccc-----cHHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChh
Q 016612 151 PRQQIC-----DIRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 151 ptG~~~-----~l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~ 219 (386)
|+|.+. ++++|.++|++||++||+||+|+. +.... ......|++ |+||+++ +|+|+|+++++ ++
T Consensus 194 p~g~~~~~~~~~l~~l~~l~~~~~~~li~De~~~~~~~~g~~~~~~~~~~~~d~~--t~sK~~~--~G~r~G~~~~~-~~ 268 (406)
T 4adb_A 194 GEGGVVPASNAFLQGLRELCNRHNALLIFDEVQTGVGRTGELYAYMHYGVTPDLL--TTAKALG--GGFPVGALLAT-EE 268 (406)
T ss_dssp TTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGG--TTSCCEEEEEC-HH
T ss_pred CCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCccchhHHHHhcCCCCCEE--Eechhhc--CCCCeEEEEEc-HH
Confidence 999875 589999999999999999999962 11111 112345776 5699996 47899999986 44
Q ss_pred HHHHHHHhhhhcCCCCChhhHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCC
Q 016612 220 LAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG 297 (386)
Q Consensus 220 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~ 297 (386)
+.+.+...........++..+.++...++.+ ....+...++.+.+.+.+++... .... ....++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~~~l~~~l~~~~~----~~~~----------~~~~~~ 334 (406)
T 4adb_A 269 CARVMTVGTHGTTYGGNPLASAVAGKVLELINTPEMLNGVKQRHDWFVERLNTINH----RYGL----------FSEVRG 334 (406)
T ss_dssp HHHTCCTTSSCCSSTTCHHHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHHHH----HHCC----------EEEEEE
T ss_pred HHhhhccCCcCCCCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCCC----------ceEEEE
Confidence 5554443333333455666666555444322 33344555555566665554310 0000 011233
Q ss_pred CCceEEEEeCCHH--hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChH
Q 016612 298 AGSVLSFLTGSLA--LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVN 371 (386)
Q Consensus 298 ~~~~~~~~~~~~~--~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~ 371 (386)
.+.++++.+.+.. ....+.+.+...|+.+.+++ ++++|++++ .++++
T Consensus 335 ~g~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~---------------------------~~~iRi~~~~~~~~e~i~ 387 (406)
T 4adb_A 335 LGLLIGCVLNADYAGQAKQISQEAAKAGVMVLIAG---------------------------GNVVRFAPALNVSEEEVT 387 (406)
T ss_dssp ETTEEEEEECTTTTTCHHHHHHHHHHTTEECEESS---------------------------TTEEEECCCTTCCHHHHH
T ss_pred EEEEEEEEEeCCcHHHHHHHHHHHHHCCcEEeecC---------------------------CCeEEEECCCCCCHHHHH
Confidence 5778888886532 46677777777788765432 456999764 37788
Q ss_pred HHHHHHHHHHhc
Q 016612 372 DLISDLDKALRT 383 (386)
Q Consensus 372 ~~i~~l~~~l~~ 383 (386)
++++.|++++++
T Consensus 388 ~~~~~l~~~l~~ 399 (406)
T 4adb_A 388 TGLDRFAAACEH 399 (406)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888887764
No 136
>3meb_A Aspartate aminotransferase; pyridoxal PHOS transferase, structural genomics, seattle structural genomi for infectious disease, ssgcid; HET: PLP; 1.90A {Giardia lamblia}
Probab=99.93 E-value=6.3e-24 Score=202.50 Aligned_cols=327 Identities=14% Similarity=0.065 Sum_probs=197.6
Q ss_pred ceeeccCCCCCC-CCCcccceeeeeeeecCCC---CCCCCccccCC-CCc-hHHHHHHHHHhhcCCC-------ceEE--
Q 016612 11 TLLMNFSNEFDP-YGALSTPLYQTATFKQPSA---TENGPYDYTRS-GNP-TRDALESLLAKLDKAD-------RALC-- 75 (386)
Q Consensus 11 ~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~---~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~-------~~i~-- 75 (386)
...++++ ...| -...++++.++......+. .......|... |.+ +++++.+++. |.+ +.++
T Consensus 49 ~~~i~l~-~g~~~d~~~~~~v~~av~~a~~~~~~~~~~~~~~Y~~~~G~~~lr~~ia~~l~---g~~~~~~~~~~i~~~~ 124 (448)
T 3meb_A 49 PKKVNLG-VGAYRDESGKPWILPAVKEAEAIISSDLSKYNKEYPPVAGFPLFLEAAQFLMF---GKDSKAAQEGRIASCQ 124 (448)
T ss_dssp TTCEEES-SCCCCCTTSCCCCCHHHHHHHHHHHHCTTTTCCSCCCTTCCHHHHHHHHHHHH---CTTCHHHHTTCEEEEE
T ss_pred CCeEEee-cccccCCCCCEechHHHHHHHHHHhhcccCCCCCCCCCcchHHHHHHHHHHhc---CCCccccCcCcEEEEE
Confidence 4468888 4444 2233444444322110001 12445667765 765 5666666652 443 4555
Q ss_pred eCcHHHHHHH---HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC---C-----CHHHHHhhhC---CCce
Q 016612 76 FTSGMAALAA---VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---C-----DLDEVASAIG---PWTK 141 (386)
Q Consensus 76 ~~~gt~al~~---~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---~-----d~~~l~~~~~---~~~~ 141 (386)
+++|++|+.. +.+++.+||+|++++|+|+++...+...++..|.+++.++. . |++++++.++ ++++
T Consensus 125 t~ggt~al~l~~~~~~~~~~gd~Vlv~~p~~~~~~~~~~~~~~~~G~~v~~~~~~~~~~~~~~d~e~l~~~l~~~~~~~~ 204 (448)
T 3meb_A 125 SLSGTGSLHIGFEFLHLWMPKAEFYMPSTTWPNHYGIYDKVFNKLKVPYKEYTYLRKDGELEIDFSNTKKDIQSAPEKSI 204 (448)
T ss_dssp ESHHHHHHHHHHHHHHHHCTTCCEEEESSCCTHHHHHHHHHHCTTTSCCEEECCBCTTSCSSBCHHHHHHHHHHSCTTCE
T ss_pred CCcHHHHHHHHHHHHHHhCCCCEEEECCCCCHhHHHHHHhhHHhCCCeEEEEeccccccCCCcCHHHHHHHHHhCCCCcE
Confidence 6777888854 34578899999999999998864443222277888888775 2 7899998886 4678
Q ss_pred EEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC----C-------CCCCccEEEeccccccccCCC
Q 016612 142 LVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P-------LELGADIVMHSATKFIAGHSD 207 (386)
Q Consensus 142 ~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~----~-------~~~~~di~~~S~sK~~~g~~g 207 (386)
++++++|+||||.+.+ +++|+++|+++|+++|+|++|....... . .....++++.|+||.+ |++|
T Consensus 205 ~v~~~~p~NPtG~~~~~~~l~~i~~l~~~~~~~li~Deay~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-g~~G 283 (448)
T 3meb_A 205 FLFHACAHNPSGIDFTEAQWKELLPIMKEKKHIAFFDSAYQGFATGSFEADAFAVRMFVDAGVEVLVAQSFSKNF-GLYG 283 (448)
T ss_dssp EEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTSSSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGG
T ss_pred EEEeCCCCCCCCcCCCHHHHHHHHHHHHHCCCEEEEecccccccCCCcccCchhHHHHhhcCCcEEEEecccccC-CCcc
Confidence 8889999999999986 6669999999999999999987433221 0 1123468899999999 5668
Q ss_pred ceEEEE--EE--------cCh----hHHHHHHHhhhhcCCCCChhhHHHHHhcCCc----------HHHHHHHHHHHHHH
Q 016612 208 VMAGVL--AV--------KGE----RLAKELYFLQNAEGSGLAPFDCWICLRGVKT----------MALRVEKQQDNAQK 263 (386)
Q Consensus 208 ~~~G~i--~~--------~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~ 263 (386)
+|+|++ ++ +++ .+.+.+...........+...+.++...+.. +....+++.++.+.
T Consensus 284 ~RiG~l~~v~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~a~~~~l~~~~l~~~~~~~~~~~~~~~~~~r~~ 363 (448)
T 3meb_A 284 ERIGCLHVVHAGVEGSVEKNKALSAAMVSGMTLQIRKTWSMSAIHGAYIVQVIVHDKRLLQMFYDNVKEMSARIHRMRSL 363 (448)
T ss_dssp GCCEEEEEECCCCSSSHHHHHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccceeeeeeeccccccccCCHHHHHHHHHHHHHHHhcccCCccHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999998 66 444 4444444444444445555555555544433 22223334444555
Q ss_pred HHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccC
Q 016612 264 IAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 343 (386)
Q Consensus 264 l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~ 343 (386)
+.+.|++.. .++......+... . ..++++.|.--..+....+++ ..|+.+.+|.
T Consensus 364 l~~~L~~~~------~~~~~~~~~~~~~--~--~~~g~~~~~~~~~~~~~~ll~---~~gV~v~~G~------------- 417 (448)
T 3meb_A 364 LHASLAKRK------TPGPGSKGTWDHI--L--TAIGMFTFTGLTPEHVDYLKE---KWSIYLVKAG------------- 417 (448)
T ss_dssp HHHHHHHTT------CCCSTTTCCCTHH--H--HCCSSEEECCCCHHHHHHHHH---HHCEEECSGG-------------
T ss_pred HHHHHHhhC------CCCcCccccccee--C--CCceEEEecCCCHHHHHHHHH---hCCEEEeCCC-------------
Confidence 555555431 0110000001121 1 123455553222333444433 3466555432
Q ss_pred CCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhcCC
Q 016612 344 ASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRTGP 385 (386)
Q Consensus 344 ~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~~~ 385 (386)
.|||++ .++++++++.|++++++.+
T Consensus 418 -----------------gRis~a~~~~~~i~~~~~~l~~~l~~~~ 445 (448)
T 3meb_A 418 -----------------GRMSMCGLTESNCDYVAEAIHDAVTKLP 445 (448)
T ss_dssp -----------------GEEEGGGCCTTTHHHHHHHHHHHHHHSC
T ss_pred -----------------cEEEEecCCHHHHHHHHHHHHHHHHhcc
Confidence 488885 4789999999999998764
No 137
>3e9k_A Kynureninase; kynurenine-L-hydrolase, kynurenine hydrolase, pyridoxal-5'-phosphate, inhibitor complex, 3-hydroxy hippur hydroxyhippuric acid, PLP; HET: PLP 3XH; 1.70A {Homo sapiens} PDB: 2hzp_A*
Probab=99.93 E-value=3.5e-26 Score=219.28 Aligned_cols=294 Identities=10% Similarity=0.074 Sum_probs=187.3
Q ss_pred chHHHHHHHHHhhcCCC-c-eEEeCcHHHHHHH-HHHhcCCCC---EEEecCCCCCcHHHHHhhhcccCCcEE-----EE
Q 016612 55 PTRDALESLLAKLDKAD-R-ALCFTSGMAALAA-VTHLLGTGE---EIVAGDDLYGGTDRLLSRVTPKTGVVV-----KR 123 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~-~-~i~~~~gt~al~~-~~~~~~~g~---~Vlv~~~~~~~~~~~~~~~~~~~g~~~-----~~ 123 (386)
+..+++++++++++|.+ + .++++++++++++ +.+++++|+ +|+++.|.|++....+...++..|.++ ..
T Consensus 111 ~~~~~l~~~la~~~g~~~~~v~~t~g~t~al~~~~~~~~~~~~~~~~Vl~~~~~~~s~~~~~~~~~~~~G~~~~~~~v~~ 190 (465)
T 3e9k_A 111 TGDESIVGLMKDIVGANEKEIALMNALTVNLHLLMLSFFKPTPKRYKILLEAKAFPSDHYAIESQLQLHGLNIEESMRMI 190 (465)
T ss_dssp GTTHHHHGGGHHHHTCCGGGEEECSCHHHHHHHHHHHHCCCCSSSCEEEEETTCCHHHHHHHHHHHHHTTCCHHHHEEEE
T ss_pred HhHHHHHHHHHHHcCCCcCCEEEECCHHHHHHHHHHHhccccCCCCEEEEcCCcCCchHHHHHHHHHHcCCcceeeeEEE
Confidence 36678999999999986 4 4555555699985 455666655 499999999997766666777778764 23
Q ss_pred eCCC-----CHHHHHhhhC---CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC-CCCCccEE
Q 016612 124 VNTC-----DLDEVASAIG---PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIV 194 (386)
Q Consensus 124 v~~~-----d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-~~~~~di~ 194 (386)
++.+ |+++++++++ +++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+..+.. ...++|++
T Consensus 191 ~~~~~~~~~d~~~l~~~i~~~~~~~~lv~~~~~~n~tG~~~~l~~i~~la~~~g~~vi~D~a~~~g~~~~~~~~~~~D~~ 270 (465)
T 3e9k_A 191 KPREGEETLRIEDILEVIEKEGDSIAVILFSGVHFYTGQHFNIPAITKAGQAKGCYVGFDLAHAVGNVELYLHDWGVDFA 270 (465)
T ss_dssp CCCTTCSSCCHHHHHHHHHHHGGGEEEEEEESBCTTTCBBCCHHHHHHHHHHTTCEEEEECTTTTTTSCCCHHHHTCCEE
T ss_pred ecCCCCCccCHHHHHHHHHhcCCCeEEEEEeCcccCcceeecHHHHHHHHHHcCCEEEEEhhhhcCCcCCchhhcCCCEE
Confidence 3322 7999999996 6899999999999999999999999999999999999999998876422 24578999
Q ss_pred Eeccccccc-cCCCceEEEEEEcChhHHHHHHHhhhh-------------------------cCCCCChhhHHHHHhcCC
Q 016612 195 MHSATKFIA-GHSDVMAGVLAVKGERLAKELYFLQNA-------------------------EGSGLAPFDCWICLRGVK 248 (386)
Q Consensus 195 ~~S~sK~~~-g~~g~~~G~i~~~~~~~~~~~~~~~~~-------------------------~~~~~~~~~~~~~~~~~~ 248 (386)
++|+||++. ||.| .|+++++++ +.+.+...... .....+......+..+++
T Consensus 271 ~~s~~K~l~~gp~~--~g~l~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~~~~~~a~~aal~ 347 (465)
T 3e9k_A 271 CWCSYKYLNAGAGG--IAGAFIHEK-HAHTIKPALVGWFGHELSTRFKMDNKLQLIPGVCGFRISNPPILLVCSLHASLE 347 (465)
T ss_dssp EECSSSTTCCCTTC--CCEEEECGG-GTTTSCCSSCCGGGBCHHHHTTCCSCCCBCSSGGGGCCSCCCHHHHHHHHHHHH
T ss_pred EECcccccccCCCc--eEEEEEcHH-HHhhcCCcccCccCCCCCcccccCCCcCcCCChHHhccCCccHHHHHHHHHHHH
Confidence 999999995 5554 588888754 32211100000 001222233333333333
Q ss_pred c-----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhc-cCCCCceEEEEeCCHHhHHHHHhhcCcc
Q 016612 249 T-----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQ-AKGAGSVLSFLTGSLALSKHVVETTKYF 322 (386)
Q Consensus 249 ~-----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 322 (386)
. +....++..++.+.+.+.+++... ..+.+...+++.++.+. +..++++++|.++. ....+.+.+...
T Consensus 348 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~~~~~~~g~~~~~p~~~~~~g~~~~~~~~~--~~~~l~~~L~~~ 421 (465)
T 3e9k_A 348 IFKQATMKALRKKSVLLTGYLEYLIKHNYG----KDKAATKKPVVNIITPSHVEERGCQLTITFSV--PNKDVFQELEKR 421 (465)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHHHCC-------------CEEECSCSSGGGBCSCEEEEECC--TTCCHHHHHHTT
T ss_pred HHHHcCHHHHHHHHHHHHHHHHHHHHhhcc----ccccccCCCCeEEeCCCCHhhcccEEEEEecC--CHHHHHHHHHHC
Confidence 2 223333444455555555554210 01112222333333221 23357889998852 234455555556
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe-c----cCChHHHHHHHHHHHhcC
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~----~~~~~~~i~~l~~~l~~~ 384 (386)
|+.+.++ .++++|+|+ + .++++++++.|++++++.
T Consensus 422 Gi~v~~~---------------------------~~~~iRis~~~~~~t~edi~~~~~~l~~~l~~~ 461 (465)
T 3e9k_A 422 GVVCDKR---------------------------NPNGIRVAPVPLYNSFHDVYKFTNLLTSILDSA 461 (465)
T ss_dssp TEECEEE---------------------------TTTEEEEBCCTTTCCHHHHHHHHHHHHHHHTC-
T ss_pred CEEEecC---------------------------CCCEEEEeCcccCCCHHHHHHHHHHHHHHHHhc
Confidence 7765421 246799998 3 477888888888888754
No 138
>2c81_A Glutamine-2-deoxy-scyllo-inosose aminotransferase; SMAT, butirosin, aminoglycoside antibiotics; HET: PMP; 1.7A {Bacillus circulans} PDB: 2c7t_A*
Probab=99.93 E-value=5e-24 Score=201.53 Aligned_cols=257 Identities=16% Similarity=0.147 Sum_probs=176.7
Q ss_pred ccCC-CCc-hHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 49 YTRS-GNP-TRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 49 y~~~-g~~-~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
|+.. |.+ +++++++.+++++|.++.+++++|++++.. +.++ +++||+|+++.|+|+++... ++..|.+++.+
T Consensus 34 ~~~~~g~~~l~~~l~~~la~~~g~~~~i~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~ 109 (418)
T 2c81_A 34 SGYWTGEESMERKFAKAFADFNGVPYCVPTTSGSTALMLALEALGIGEGDEVIVPSLTWIATATA----VLNVNALPVFV 109 (418)
T ss_dssp TSBCCSSCCHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCTHHHHH----HHHTTCEEEEE
T ss_pred cCcccCCHHHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCcCEEEECCCccHhHHHH----HHHcCCEEEEE
Confidence 5554 665 799999999999999988999999999874 5556 78999999999999998643 45678898888
Q ss_pred CCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-cc-CCCCCCccEEEe
Q 016612 125 NTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-LS-RPLELGADIVMH 196 (386)
Q Consensus 125 ~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-~~-~~~~~~~di~~~ 196 (386)
+.+ |++++++.+++++++|++ +||+|...++++|.++|+++|+++|+|++|+.+. +. .....-.|+++.
T Consensus 110 ~~~~~~~~~d~~~l~~~i~~~~~~v~~---~~~~G~~~~~~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~~ 186 (418)
T 2c81_A 110 DVEADTYCIDPQLIKSAITDKTKAIIP---VHLFGSMANMDEINEIAQEHNLFVIEDCAQSHGSVWNNQRAGTIGDIGAF 186 (418)
T ss_dssp CBCTTTCSBCHHHHGGGCCTTEEEECC---BCCTTCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEE
T ss_pred ecCCCCCCcCHHHHHHhhCCCCeEEEE---eCCcCCcccHHHHHHHHHHCCCEEEEECcccccCccCCEecccccceEEE
Confidence 754 799999999888999885 4689999999999999999999999999998775 22 111112367777
Q ss_pred cc--ccccccCCCceEEEEEEcChhHHHHHHHhhhhcC------------C--------------CCChhhHHHHHhcCC
Q 016612 197 SA--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEG------------S--------------GLAPFDCWICLRGVK 248 (386)
Q Consensus 197 S~--sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~------------~--------------~~~~~~~~~~~~~~~ 248 (386)
|+ ||+++ + | ++|+++++++.+.+.+........ . .+....+++....++
T Consensus 187 s~s~~K~~~-~-g-~~g~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~~~~l~ 263 (418)
T 2c81_A 187 SCQQGKVLT-A-G-EGGIIVTKNPRLFELIQQLRADSRVYCDDSSELMHGDMQLVKKGDIQGSNYCLSEFQSAILLDQLQ 263 (418)
T ss_dssp ECCTTSSSC-S-S-SCEEEEESCHHHHHHHHHHHBTTEEECSCGGGCCTTCBSEEECCSSCCCBCCCCHHHHHHHHHHHT
T ss_pred eccCCcccC-C-C-CeEEEEECCHHHHHHHHHHHHhCccccccccccccchhhccccccccCcCCCcCHHHHHHHHHHHH
Confidence 77 99995 4 5 799999876666655544332110 0 022233333334445
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCC--C-C-ceEEEEeCC----HHhHHHHHhhcC
Q 016612 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKG--A-G-SVLSFLTGS----LALSKHVVETTK 320 (386)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~--~-~-~~~~~~~~~----~~~~~~l~~~l~ 320 (386)
.+....++..++.+.+.+.|.+.+.+ .+... +.+ . . .++.+.+++ ......+.+.+.
T Consensus 264 ~~~~~~~~~~~~~~~l~~~L~~~~g~--------------~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~ 328 (418)
T 2c81_A 264 ELDDKNAIREKNAMFLNDALSKIDGI--------------KVMKR-PPQVSRQTYYGYVFRFDPVKFGGLNADQFCEILR 328 (418)
T ss_dssp THHHHHHHHHHHHHHHHHHHTTSTTE--------------EECCC-CTTEEECCCSEEEEEECGGGTTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccCCCc--------------ccCCC-CCCCcccccEEEEEEEccccccccCHHHHHHHHH
Confidence 55555666666677777777654321 11100 011 1 1 355566652 223567777777
Q ss_pred cc-eec---cCCCC
Q 016612 321 YF-SIT---VSFGS 330 (386)
Q Consensus 321 ~~-gi~---~~~G~ 330 (386)
.. |+. ++.|.
T Consensus 329 ~~~gI~~~~v~~~~ 342 (418)
T 2c81_A 329 EKLNMGTFYLHPPY 342 (418)
T ss_dssp HHHTCCTTTEECCC
T ss_pred HcCCCCcccccccc
Confidence 66 777 66554
No 139
>3bwn_A AT1G70560, L-tryptophan aminotransferase; auxin synthesis, pyridoxal-5'- phosphate, indole-3-pyruvate; HET: LLP PMP PHE; 2.25A {Arabidopsis thaliana} PDB: 3bwo_A*
Probab=99.93 E-value=1.8e-25 Score=209.40 Aligned_cols=297 Identities=15% Similarity=0.108 Sum_probs=178.4
Q ss_pred CCccccCC-CC-----c-hHHHHHHHHHhhcC----CCceEEeCcHH-HHHHH-HHHhcCCCC----EEEecCCCCCcHH
Q 016612 45 GPYDYTRS-GN-----P-TRDALESLLAKLDK----ADRALCFTSGM-AALAA-VTHLLGTGE----EIVAGDDLYGGTD 107 (386)
Q Consensus 45 ~~~~y~~~-g~-----~-~~~~l~~~l~~~~g----~~~~i~~~~gt-~al~~-~~~~~~~g~----~Vlv~~~~~~~~~ 107 (386)
....|... |. + +++++.+++. ..| .++.|++++|+ +++.. +.+++++|| +|++++|+|+++.
T Consensus 55 ~~~~Y~~~~G~~~~~~~~lr~aia~~~~-~~g~~~~~~~~i~~t~G~~~al~~~~~~l~~~Gd~~~~~Vlv~~P~y~~~~ 133 (391)
T 3bwn_A 55 LMSYFSDMTNLCWFLEPELEDAIKDLHG-VVGNAATEDRYIVVGTGSTQLCQAAVHALSSLARSQPVSVVAAAPFYSTYV 133 (391)
T ss_dssp TCSSCSCTTSSSTTSCHHHHHHHHHHHH-HHCSBCCSSSEEEEEEHHHHHHHHHHHHHHHTSSSSSEEEEECSSCCTHHH
T ss_pred hhhcCCCCCCcccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEeCChHHHHHHHHHHhcCCCCCCcceEEEcCCCchhHH
Confidence 45678776 75 4 5666666554 223 23456666665 88874 555789999 9999999999886
Q ss_pred HHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC-C
Q 016612 108 RLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-P 186 (386)
Q Consensus 108 ~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-~ 186 (386)
..++..|.+++.++.+ .+.++ .+++++|++++|+||||.+.+ +|++.+++++++||+|++|..+.... .
T Consensus 134 ----~~~~~~g~~~~~~~~d-~~~l~---~~~~k~v~l~~p~NPtG~~~~--~l~~~~~~~~~~ii~De~y~~~~~~~l~ 203 (391)
T 3bwn_A 134 ----EETTYVRSGMYKWEGD-AWGFD---KKGPYIELVTSPNNPDGTIRE--TVVNRPDDDEAKVIHDFAYYWPHYTPIT 203 (391)
T ss_dssp ----HHHHTTCBTTEEEEEE-STTCC---CCSCEEEEEESSCTTTCCCCC--CCC-----CCCEEEEECTTCSTTTSCCC
T ss_pred ----HHHHHcCCeEEEecCC-HHHcC---CCCCEEEEECCCCCCCchhHH--HHHHHhhcCCCEEEEeCCCCCCCCCccc
Confidence 4455677777666642 23332 367899999999999999986 45442222349999999997532211 1
Q ss_pred CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCC--------------cHHH
Q 016612 187 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVK--------------TMAL 252 (386)
Q Consensus 187 ~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~ 252 (386)
...+.+++++|+||.+ |++|+|+||+++.++.+.+.+.........+.+...+.++...++ .+..
T Consensus 204 ~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~l~~~~~~~~~~~~~~~~~~~ 282 (391)
T 3bwn_A 204 RRQDHDIMLFTFSKIT-GHAGSRIGWALVKDKEVAKKMVEYIIVNSIGVSKESQVRTAKILNVLKETCKSESESENFFKY 282 (391)
T ss_dssp CCBCCSEEEEEHHHHH-SCGGGCEEEEEECCHHHHHHHHHHHHHHHSSCCHHHHHHHHHHHHHHHHHTTCCCTTTSHHHH
T ss_pred cCCCCeEEEEechhhc-CCCccceEEEEecCHHHHHHHHHHhcccccCCCHHHHHHHHHHHhCcchhccccccHHHHHHH
Confidence 1346789999999998 667899999998456676666555543334455555544433332 2333
Q ss_pred HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhh-hccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCc
Q 016612 253 RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY-SQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSV 331 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~-~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~ 331 (386)
..+.+.++.+.+.+.|++.+. +...... .+...+. ...+..|.++++.+++.+... +.+...|+.+.+|..
T Consensus 283 ~~~~~~~~~~~l~~~L~~~~~---~~~~~p~--~~~~~f~~~~~~~~g~~~~~~~~~~~~~~---~~l~~~gV~v~pg~~ 354 (391)
T 3bwn_A 283 GREMMKNRWEKLREVVKESDA---FTLPKYP--EAFCNYFGKSLESYPAFAWLGTKEETDLV---SELRRHKVMSRAGER 354 (391)
T ss_dssp HHHHHHHHHHHHHHHHHTCSS---EECCCCC--CEEETTTTEEECCCCSEEEEEESSSCCHH---HHHHHTTEECEEGGG
T ss_pred HHHHHHHHHHHHHHHHHhCCC---cccccCC--ccccccccccCCCcceEEEecCCcHHHHH---HHHHHCCEEEccCCC
Confidence 445556666667777766431 1111100 0000000 000112456778886433333 334445777777665
Q ss_pred cccccccccccCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 332 KSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 332 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
+. ..++++|||++. ++++++++.|++++++
T Consensus 355 fg----------------------~~~~~iRis~~~~~e~i~~~~~~L~~~~~~ 386 (391)
T 3bwn_A 355 CG----------------------SDKKHVRVSMLSREDVFNVFLERLANMKLI 386 (391)
T ss_dssp GT----------------------CCTTEEEEESCSCHHHHHHHHHHHHSCC--
T ss_pred CC----------------------CCCCEEEEEecCCHHHHHHHHHHHHHHHHh
Confidence 21 135789999974 4566777777666543
No 140
>3asa_A LL-diaminopimelate aminotransferase; PLP dependent aminotransferase; 2.05A {Chlamydia trachomatis} PDB: 3asb_A*
Probab=99.93 E-value=1.3e-24 Score=204.25 Aligned_cols=291 Identities=15% Similarity=0.151 Sum_probs=175.5
Q ss_pred CccccCC-CCchHHHHHHHHHhh--cC-CC--ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc
Q 016612 46 PYDYTRS-GNPTRDALESLLAKL--DK-AD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV 119 (386)
Q Consensus 46 ~~~y~~~-g~~~~~~l~~~l~~~--~g-~~--~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~ 119 (386)
...|++. |. .++++.++++ .| .+ +.++++++++++.++..++++||+|++++|+|+++.. .++..|.
T Consensus 68 ~~~y~~~~g~---~~lr~~la~~l~~g~~~~~~v~~~~G~~~al~~~~~~~~~gd~Vl~~~p~y~~~~~----~~~~~g~ 140 (400)
T 3asa_A 68 CRGYGPDFGL---PALRQKLSEDFYRGFVDAKEIFISDGAKVDLFRLLSFFGPNQTVAIQDPSYPAYLD----IARLTGA 140 (400)
T ss_dssp CCCCCCTTCC---HHHHHHHHHTTSTTSSCGGGEEEESCHHHHHHHHHHHHCSSCEEEEEESCCHHHHH----HHHHTTC
T ss_pred ccCCCCCCCC---HHHHHHHHHHHHcCCCCHHHEEEccChHHHHHHHHHHcCCCCEEEECCCCcHHHHH----HHHHcCC
Confidence 3456544 44 3566666665 46 33 4555566669998777778999999999999988763 3455677
Q ss_pred E-EEEeCCCCHHHHHhhhC--CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc-----cCCCC
Q 016612 120 V-VKRVNTCDLDEVASAIG--PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLE 188 (386)
Q Consensus 120 ~-~~~v~~~d~~~l~~~~~--~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~-----~~~~~ 188 (386)
+ ++.++.++...+...+. +++++|++++|+||||.+.+ +++|.++|+++|+++|+|++|+.... .....
T Consensus 141 ~~~~~~~~~~~~~~~~~l~~~~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~ 220 (400)
T 3asa_A 141 KEIIALPCLQENAFFPEFPEDTHIDILCLCSPNNPTGTVLNKDQLRAIVHYAIEHEILILFDAAYSTFISDPSLPKSIFE 220 (400)
T ss_dssp SEEEEEECCGGGTTCCCCCTTCCCSEEEEESSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEECTTGGGCCCTTSCSSGGG
T ss_pred cceEecccchhcCcccChhhccCccEEEEeCCCCCCCCcCCHHHHHHHHHHHHHcCCEEEEEchhhhhhcCCCCCCchhh
Confidence 7 77777642111111111 57899999999999999987 67789999999999999999873211 11112
Q ss_pred C----CccEEEeccccccccCCCceEEEEEEcChh-------HHHHHHHhhhhcCCCCChhhHHHHHhcCC--cHHHHHH
Q 016612 189 L----GADIVMHSATKFIAGHSDVMAGVLAVKGER-------LAKELYFLQNAEGSGLAPFDCWICLRGVK--TMALRVE 255 (386)
Q Consensus 189 ~----~~di~~~S~sK~~~g~~g~~~G~i~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 255 (386)
. +.++++.|+||++ |.+|+|+||++++++. +...............+...+.++...++ .+....+
T Consensus 221 ~~~~~~~~i~~~s~sK~~-g~~GlriG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~ 299 (400)
T 3asa_A 221 IPDARFCAIEINSFSKPL-GFAGIRLGWTVIPQELTYADGHFVIQDWERFLSTTFNGASIPAQEAGVAGLSILPQLEAIH 299 (400)
T ss_dssp STTGGGTEEEEEECCGGG-TTTTCCCEEEECCTTCBCTTSCBHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTCHHHH
T ss_pred CCCCCCceEEEecchhhc-CCcchheeEEeeChhhccchhhhHHHHHHHHhccCccCCChHHHHHHHHHhCcHHHHHHHH
Confidence 2 3469999999999 5568999999987654 23322212211122344444443333221 1233345
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-eCCHHhHHHHHhhcC-cceeccCCCCccc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-TGSLALSKHVVETTK-YFSITVSFGSVKS 333 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~~~l~~~l~-~~gi~~~~G~~~~ 333 (386)
.+.++.+.+.+.+++.. + . +. . ...+.++++. ++......++.+.+. ..|+.+.+|..+.
T Consensus 300 ~~~~~~~~l~~~L~~~g-~-~-------------~~--~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~gv~v~~g~~f~ 361 (400)
T 3asa_A 300 YYRENSDLLRKALLATG-F-E-------------VF--G-GEHAPYLWVKPTQANISDRDLFDFFLREYHIAITPGIGFG 361 (400)
T ss_dssp HHHHHHHHHHHHHHHTT-C-E-------------EE--E-CSSSSEEEEECCCTTCCTTTHHHHHHHHHSEECEEGGGGC
T ss_pred HHHHHHHHHHHHHHHCC-C-e-------------ee--C-CCCceEEEEeccCCCCCHHHHHHHHHHhCCEEEeChhHhC
Confidence 55566666777776541 1 1 11 0 1135677887 643212233444443 3477777665421
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhc
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~ 383 (386)
+ ..++++|||+ ..+++++.++.|++++++
T Consensus 362 ----~-----------------~~~~~iRis~~~~~e~i~~~l~~l~~~~~~ 392 (400)
T 3asa_A 362 ----R-----------------SGSGFVRFSSLGKREDILAACERLQMAPAL 392 (400)
T ss_dssp ----G-----------------GGTTCEEEECCSCHHHHHHHHHHHHC----
T ss_pred ----C-----------------CCCCEEEEEeeCCHHHHHHHHHHHHHHHHh
Confidence 0 0246799995 247778888888777764
No 141
>3mad_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxal phosphate; HET: LLP; 2.00A {Symbiobacterium thermophilum} PDB: 3maf_A* 3mau_A* 3mbb_A*
Probab=99.92 E-value=1.6e-24 Score=210.32 Aligned_cols=277 Identities=17% Similarity=0.163 Sum_probs=189.1
Q ss_pred hHHHHHHHHHhhcCCC----ce--EEeCcHHHHHH-HHHHhcCCC--------CEEEecCCCCCcHHHHHhhhcccCCcE
Q 016612 56 TRDALESLLAKLDKAD----RA--LCFTSGMAALA-AVTHLLGTG--------EEIVAGDDLYGGTDRLLSRVTPKTGVV 120 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~----~~--i~~~~gt~al~-~~~~~~~~g--------~~Vlv~~~~~~~~~~~~~~~~~~~g~~ 120 (386)
+.+++++++++++|.+ .. +++++|++++. ++.++.++| |+|+++.+.|.++. ..++..|.+
T Consensus 140 le~~l~~~la~~~g~~~~~~~v~~~~t~ggt~a~~~al~a~~~~g~~~~g~~~d~Vi~~~~~~~~~~----~~~~~~G~~ 215 (514)
T 3mad_A 140 FEAEVVAMTAHMLGGDAAGGTVCGTVTSGGTESLLLAMKTYRDWARATKGITAPEAVVPVSAHAAFD----KAAQYFGIK 215 (514)
T ss_dssp HHHHHHHHHHHHTTGGGGTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHCCSSCEEEEETTSCTHHH----HHHHHHTCE
T ss_pred HHHHHHHHHHHHcCCCCccCCcceEEcCcHHHHHHHHHHHHHHHhhhhcCCCCCeEEEeCccchHHH----HHHHHcCCe
Confidence 5667888889999876 44 78888889986 455566655 89999999999885 455567899
Q ss_pred EEEeCCC-----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc------------
Q 016612 121 VKRVNTC-----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL------------ 183 (386)
Q Consensus 121 ~~~v~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~------------ 183 (386)
++.++.+ |+++|++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+..
T Consensus 216 v~~v~~~~~~~~d~~~Le~~i~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~i~livDea~~~~~~~~~~~~g~~~~~ 295 (514)
T 3mad_A 216 LVRTPLDADYRADVAAMREAITPNTVVVAGSAPGYPHGVVDPIPEIAALAAEHGIGCHVDACLGGFILPWAERLGYPVPP 295 (514)
T ss_dssp EEEECBCTTSCBCHHHHHHHCCTTEEEEEEETTCTTTCCCCCHHHHHHHHHHHTCEEEEECTTTTTTHHHHHHTTCCCCC
T ss_pred eEEeeeCCCCCCCHHHHHHHhccCCEEEEEeCCCCCCccccCHHHHHHHHHHhCCeEEEecccccccchhHHhcCCCCCc
Confidence 9999875 89999999999999999999999999999999999999999999999999875432
Q ss_pred cCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh-h--------c-CCCCCh---hhHHHHHhcC--C
Q 016612 184 SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-A--------E-GSGLAP---FDCWICLRGV--K 248 (386)
Q Consensus 184 ~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~-~--------~-~~~~~~---~~~~~~~~~~--~ 248 (386)
.+....+.|++++|+||++.++.+ +|+++++++.+.+....... . . ...... ...++.+..+ .
T Consensus 296 ~~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gs~~~~~~~a~~aal~~l~~~ 373 (514)
T 3mad_A 296 FDFRLEGVTSVSADTHKYGYGAKG--TSVILYRRPDLLHYQYFIAADWPGGLYFSPTFAGSRPGALSATAWAAMLSLGEE 373 (514)
T ss_dssp CSTTSTTCCEEEECTTTTTCCCSS--CEEEEESSHHHHTTTCEEESSCTTCSEEESSSCSSCCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEECchhccCCCCC--eEEEEEeCHHHhccccccccccCCCcccCCccCCCCchHHHHHHHHHHHHHhHH
Confidence 122345789999999999766554 79998887654331110000 0 0 001111 1223222222 1
Q ss_pred cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCC
Q 016612 249 TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 328 (386)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~ 328 (386)
.+....++..++.+.+.+.+++.+. ..++ ....+++++...+. ...++.+.+...|+.+ .
T Consensus 374 ~~~~~~~~~~~~~~~l~~~L~~~~g--------------~~~~----~~~~~~~~~~~~~~-~~~~l~~~L~~~Gi~v-~ 433 (514)
T 3mad_A 374 GYLDATRRILQAADRLKAGVRAIPS--------------LKIL----GDPLWVIAVASDEL-NIYQVMEEMAGRGWRL-N 433 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTSTT--------------CEES----SCCSSEEEEECSSS-CHHHHHHHHHTTTCBC-E
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCC--------------eEEe----CCCeEEEEEeCCCC-CHHHHHHHHHhcCCEe-c
Confidence 2334455556666666777665432 1111 11234777776432 2556777776667754 2
Q ss_pred CCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHHHHhc
Q 016612 329 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 329 G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~~l~~ 383 (386)
|.. .++.+|++++ .++++++++.|++++++
T Consensus 434 g~~-------------------------~~~~~Ri~~~~~~~~~e~i~~~l~~L~~~l~~ 468 (514)
T 3mad_A 434 GLH-------------------------RPPAFHVALTLRHTEPGVVDRFLADLQDAVAQ 468 (514)
T ss_dssp EET-------------------------TTTEEEEECCGGGGSTTHHHHHHHHHHHHHHH
T ss_pred cCC-------------------------CCCeEEEEEecCCCCHHHHHHHHHHHHHHHHH
Confidence 111 1345999986 37889999999988864
No 142
>3lws_A Aromatic amino acid beta-eliminating lyase/threonine aldolase; structural genomics, joint center for structural genomics, JCSG; HET: LLP MSE; 2.00A {Exiguobacterium sibiricum}
Probab=99.92 E-value=8e-25 Score=202.55 Aligned_cols=288 Identities=13% Similarity=0.042 Sum_probs=183.6
Q ss_pred CCCCCCCcccceeeeeeeec-CCCC-CCCCccccCCCCchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCC-
Q 016612 19 EFDPYGALSTPLYQTATFKQ-PSAT-ENGPYDYTRSGNPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGE- 94 (386)
Q Consensus 19 ~~~~~g~~~~~~~~~~~~~~-~~~~-~~~~~~y~~~g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~- 94 (386)
+|+|+|..+.|......... .... ......|+. .+...++++++++++|.+..+++++|++++. ++..++.+||
T Consensus 11 ~~~~l~~~~~p~~~~~~~~~~~~~~~~~~~~~y~~--~~~~~~l~~~la~~~~~~~~i~~~~G~~a~~~al~~~~~~gd~ 88 (357)
T 3lws_A 11 QTTGQISGHGKRNVGVLKTAFAAVADEMASDQYGT--GAIIEPFEQKFADVLGMDDAVFFPSGTMAQQVALRIWSDETDN 88 (357)
T ss_dssp TCSEESSBSSCCBHHHHHHHHTTSCTTCBCEETTE--ETTHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTC
T ss_pred hhcccccCCCCCCHHHHHHHHHHhhcccCcccccC--ChHHHHHHHHHHHHhCCCcEEEecCcHHHHHHHHHHHhhcCCC
Confidence 78888888888665221111 1100 111223332 2578899999999999998888999998876 5566778888
Q ss_pred -EEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----CHHHHHhhhCCCceEEEEeCCCCCC-ccccc---HHHHHHHH
Q 016612 95 -EIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVESPTNPR-QQICD---IRKIAEMA 165 (386)
Q Consensus 95 -~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~~~~~~~~v~~~~~~npt-G~~~~---l~~i~~la 165 (386)
.|+++.+.|...... .......|.+++.++.. |+++++++. ++++|++++|+||+ |.+.+ +++|.++|
T Consensus 89 ~~vi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~d~~~l~~~~--~~~~v~~~~p~np~~G~~~~~~~l~~i~~~~ 165 (357)
T 3lws_A 89 RTVAYHPLCHLEIHEQ-DGLKELHPIETILVGAADRLMTLDEIKALP--DIACLLLELPQREIGGVAPAFSELETISRYC 165 (357)
T ss_dssp CEEEECTTCHHHHSST-THHHHHSSCEEEECSCTTSCCCHHHHHTCC--SCSEEEEESSBGGGTSBCCCHHHHHHHHHHH
T ss_pred cEEEecccceeeeecc-chhhhccCcEEEEecCCCCCcCHHHHhcCc--CcceEEEEcccccCCceeCCHHHHHHHHHHH
Confidence 677777765443210 01233458888888753 889999873 49999999999998 88875 89999999
Q ss_pred HHcCCEEEEeCCCCC---CCcc---CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCC--Ch
Q 016612 166 HAHGALLLVDNSIMS---PVLS---RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--AP 237 (386)
Q Consensus 166 ~~~~~~li~D~a~~~---~~~~---~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~--~~ 237 (386)
++||++||+|++|.. +... .....+.|+++.|+||+++++.| |+++++ +++.+.+.......+... ..
T Consensus 166 ~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~~~~~g---g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 241 (357)
T 3lws_A 166 RERGIRLHLDGARLFEMLPYYEKTAAEIAGLFDSIYISFYKGLGGIAG---AILAGP-AAFCQTARIWKRRYGGDLISLY 241 (357)
T ss_dssp HHTTCEEEEEETTHHHHHHHHTCCHHHHHTTSSEEEEESSSTTCCSSC---EEEEEC-HHHHHHHHHHHHHTTCCCSCCH
T ss_pred HHcCCEEEEECchhhhhhhhcCCChHHHHhcCCEEEEeccccCCCCce---EEEEcC-HHHHHHHHHHHHHhcCCcccch
Confidence 999999999999751 1111 11113568889999999977654 888876 556665554443332221 22
Q ss_pred hhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHH
Q 016612 238 FDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHV 315 (386)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l 315 (386)
..+.+...+++....+.++..++.+.+.+.|++.+.+ .+.. .+..++++++.++.. ....++
T Consensus 242 ~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~--------------~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 305 (357)
T 3lws_A 242 PYIVSADYYYELRKDRMGQYYEQAKQLAEQFNALPGV--------------HTTP--EVPVSNMFHLHFDGQAADISPKL 305 (357)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTSTTE--------------EEES--SSCSSSEEEEEEESCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--------------eecc--CCCcceEEEEEecCChHHHHHHH
Confidence 2222222333222233344556667777777765321 1100 022467888887543 335677
Q ss_pred HhhcCcceeccCCCCc
Q 016612 316 VETTKYFSITVSFGSV 331 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~ 331 (386)
.+.+...|+.+++|..
T Consensus 306 ~~~l~~~Gi~v~~g~~ 321 (357)
T 3lws_A 306 EQVQEETGLGFVGYLV 321 (357)
T ss_dssp HHHHHHHCEESCSCCE
T ss_pred HHHHHhcCeEEecccc
Confidence 8888888998887743
No 143
>3fsl_A Aromatic-amino-acid aminotransferase; tyrosine aminotransferase, pyridoxal phosphate, internal ALD schiff base, amino-acid biosynthesis; HET: PLR; 2.35A {Escherichia coli k-12} SCOP: c.67.1.1 PDB: 3tat_A*
Probab=99.92 E-value=4e-24 Score=200.76 Aligned_cols=198 Identities=15% Similarity=0.102 Sum_probs=141.8
Q ss_pred ceeeccCCCC--CCCCCcc--cceeeeeeeecCCCCCCCCccccCC-CCc-hHHHHHHHHHhhcC----CC--ceEEeCc
Q 016612 11 TLLMNFSNEF--DPYGALS--TPLYQTATFKQPSATENGPYDYTRS-GNP-TRDALESLLAKLDK----AD--RALCFTS 78 (386)
Q Consensus 11 ~~~~~~~~~~--~~~g~~~--~~~~~~~~~~~~~~~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~--~~i~~~~ 78 (386)
..+++++.+. ++.+..+ +.+.++... ..........|... |.+ +++++.+++....+ .+ +.++++|
T Consensus 26 ~~~i~l~~g~y~d~~~~~~~~~~v~~a~~~--~~~~~~~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~~~i~~t~g 103 (397)
T 3fsl_A 26 SDKVNLSIGLYYNEDGIIPQLQAVAEAEAR--LNAQPHGASLYLPMEGLNCYRHAIAPLLFGADHPVLKQQRVATIQTLG 103 (397)
T ss_dssp SCCEECSSCCCCCTTSCCCCCHHHHHHHHH--HHHSCCCCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESH
T ss_pred CCeEEEeeeEEECCCCCccCcHHHHHHHHh--hccCccccccCCCCCchHHHHHHHHHHHhcCCcccccccceEEEEcCC
Confidence 4578888442 3444333 233332111 01112244567765 765 78888888776554 33 4455666
Q ss_pred HHHHHHHH---HHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC----C---CHHHHHhhhC---CCceEEEE
Q 016612 79 GMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----C---DLDEVASAIG---PWTKLVWV 145 (386)
Q Consensus 79 gt~al~~~---~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~---d~~~l~~~~~---~~~~~v~~ 145 (386)
|++++..+ .+++++||+|++++|+|+++. ..++..|.+++.++. . |++++++.++ ++++++++
T Consensus 104 ~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~ 179 (397)
T 3fsl_A 104 GSGALKVGADFLKRYFPESGVWVSDPTWENHV----AIFAGAGFEVSTYPWYDEATNGVRFNDLLATLKTLQAGSIVLLH 179 (397)
T ss_dssp HHHHHHHHHHHHHHHCTTCCEEEESSCCHHHH----HHHHHTTCCEEEECCEETTTTEECHHHHHHHHTTCCTTCEEEEC
T ss_pred cHHHHHHHHHHHHhcCCCCeEEEeCCCchhHH----HHHHHcCCceEEEeeeeccCCcCcHHHHHHHHHhCCCCCEEEEe
Confidence 67998754 456899999999999998885 445578888888887 2 8999999987 67889999
Q ss_pred eCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC----------CCCCCccEEEeccccccccCCCceEEE
Q 016612 146 ESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----------PLELGADIVMHSATKFIAGHSDVMAGV 212 (386)
Q Consensus 146 ~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~----------~~~~~~di~~~S~sK~~~g~~g~~~G~ 212 (386)
++|+||||.+.+ +++|.++|+++|+++|+|++|+...... ....+.++++.|+||.+ |++|+|+||
T Consensus 180 ~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~S~SK~~-~~~G~riG~ 258 (397)
T 3fsl_A 180 PCCHNPTGADLTNDQWDAVIEILKARELIPFLDIAYQGFGAGMEEDAYAIRAIASAGLPALVSNSFSKIF-SLYGERVGG 258 (397)
T ss_dssp SSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTSSSCTTGGGHHHHHHHHTTCCEEEEEECTTTT-TCGGGCCEE
T ss_pred CCCCCCCCcCCCHHHHHHHHHHHHhCCEEEEEecCchhhccCcccccHHHHHHHhcCCCEEEEecccccc-cCcCCCeeE
Confidence 999999999975 6699999999999999999987544320 01235679999999999 666899999
Q ss_pred EEE
Q 016612 213 LAV 215 (386)
Q Consensus 213 i~~ 215 (386)
+++
T Consensus 259 ~~~ 261 (397)
T 3fsl_A 259 LSV 261 (397)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 144
>1mdo_A ARNB aminotransferase; type 1 aminotransferase fold; HET: MSE PMP; 1.70A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1mdx_A* 1mdz_A*
Probab=99.92 E-value=6.9e-24 Score=198.85 Aligned_cols=302 Identities=16% Similarity=0.181 Sum_probs=199.3
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
+...++++.+++++|.++.+++++|++|+.+ +.++ +++||+|++++|+|+++. ..++..|.+++.++.+
T Consensus 39 ~~~~~l~~~la~~~~~~~~~~~~~gt~al~~~~~~~~~~~gd~Vl~~~~~~~~~~----~~~~~~g~~~~~v~~~~~~~~ 114 (393)
T 1mdo_A 39 PKNQELEAAFCRLTGNQYAVAVSSATAGMHIALMALGIGEGDEVITPSMTWVSTL----NMIVLLGANPVMVDVDRDTLM 114 (393)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCHHHH----HHHHHTTCEEEEECBCTTTCC
T ss_pred hHHHHHHHHHHHHhCCCcEEEecChHHHHHHHHHHcCCCCCCEEEeCCCccHhHH----HHHHHCCCEEEEEeccCCcCC
Confidence 5788999999999999888999999999974 4556 789999999999999886 3445688999888752
Q ss_pred -CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCC-ccEEEeccc--cccc
Q 016612 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG-ADIVMHSAT--KFIA 203 (386)
Q Consensus 128 -d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~-~di~~~S~s--K~~~ 203 (386)
|++++++.+++++++|+++ ||+|.+.++++|.++|+++|+++|+|++|+.+........+ .|++++|+| |+++
T Consensus 115 ~d~~~l~~~l~~~~~~v~~~---~~~G~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~S~~k~K~l~ 191 (393)
T 1mdo_A 115 VTPEHIEAAITPQTKAIIPV---HYAGAPADLDAIYALGERYGIPVIEDAAHATGTSYKGRHIGARGTAIFSFHAIKNIT 191 (393)
T ss_dssp BCHHHHHHHCCTTEEEECCB---CGGGCCCCHHHHHHHHHHHTCCBCEECTTCTTCEETTEETTSSSEEEEECCTTSSSC
T ss_pred CCHHHHHHhcCCCceEEEEe---CCCCCcCCHHHHHHHHHHcCCeEEEECccccCCeECCeecCCCCeEEEeCCCCCccc
Confidence 7899999998889999865 47999999999999999999999999999876533222235 899999999 8885
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhhhhcC------------------------CCCChhhHHHHHhcCCcHHHHHHHHHH
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQNAEG------------------------SGLAPFDCWICLRGVKTMALRVEKQQD 259 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~~~~~------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (386)
+ | ++|+++++++++.+.+........ ..+++..+.+....++.+....++..+
T Consensus 192 ~--~-~~g~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~~~~l~~~~~~~~~~~~ 268 (393)
T 1mdo_A 192 C--A-EGGIVVTDNPQFADKLRSLKFHGLGVDAWDRQSGGRAPQAEVLAPGYKYNLPDLNAAIALAQLQKLDALNARRAA 268 (393)
T ss_dssp S--S-SCEEEEESCHHHHHHHHHHTBTTEECC-----------CCEESSCCCBCCCCHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred c--c-cceEEEeCCHHHHHHHHHHHhcCCcccchhhhcccccccccccccCccCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 3 689999876666665554332110 113444444444444445555555566
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC---HHhHHHHHhhcCcceeccCCCCcccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---LALSKHVVETTKYFSITVSFGSVKSLIS 336 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~l~~~l~~~gi~~~~G~~~~~~~ 336 (386)
+.+.+.+.+.+.+ + .+ ...+.. .....+.++++.+++ .....++.+.+...|+.++.|.... ..
T Consensus 269 ~~~~l~~~L~~~~-~-~~--~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~~l~~~l~~~gi~v~~~~~~~-~~ 335 (393)
T 1mdo_A 269 IAAQYHQAMADLP-F-QP--LSLPSW--------EHIHAWHLFIIRVDEARCGITRDALMASLKTKGIGTGLHFRAA-HT 335 (393)
T ss_dssp HHHHHHHHHHTSS-C-EE--CCCCSS--------CEECCCSCEEEECCHHHHSSCHHHHHHHHHHTTBCCBCCCCCG-GG
T ss_pred HHHHHHHHHhcCC-c-cc--ccCCCC--------CCCceeEEEEEEecccccccCHHHHHHHHHhCCCCcccccCcc-cc
Confidence 6677777776543 1 11 111000 001234578888753 1236677788877888877765321 00
Q ss_pred cccccc---CCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 337 MPCFMS---HASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 337 ~p~~~~---~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.|.... ...++.... .....+|++++. ++++++++.|+++++.
T Consensus 336 ~~~~~~~~~~~~~~~~~~----~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~ 385 (393)
T 1mdo_A 336 QKYYRERFPTLTLPDTEW----NSERICSLPLFPDMTESDFDRVITALHQIAGQ 385 (393)
T ss_dssp SHHHHHHSTTCCCHHHHH----HHTTEEEECCCTTCCHHHHHHHHHHHHHHHC-
T ss_pred ChhhhccCCccCChhHHH----HHhCEEEecCCCCCCHHHHHHHHHHHHHHHhc
Confidence 111000 001111000 014569999974 6666677777666654
No 145
>2eh6_A Acoat, acetylornithine aminotransferase; ARGD, structural genomics, NPPSFA, national project on prote structural and functional analyses; HET: PLP; 1.90A {Aquifex aeolicus}
Probab=99.92 E-value=4.8e-24 Score=198.62 Aligned_cols=273 Identities=16% Similarity=0.173 Sum_probs=178.8
Q ss_pred chHHHHHHHHHhhcCC-CceEEeCcHHHHHHHHHH----hc---CCC-CEEEecCCCCCcHHHHHhhhccc----CCc--
Q 016612 55 PTRDALESLLAKLDKA-DRALCFTSGMAALAAVTH----LL---GTG-EEIVAGDDLYGGTDRLLSRVTPK----TGV-- 119 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~-~~~i~~~~gt~al~~~~~----~~---~~g-~~Vlv~~~~~~~~~~~~~~~~~~----~g~-- 119 (386)
+...++++.+++++|. ++.+++++|++++.+++. +. ++| |+|++++|.|+++...+...... .+.
T Consensus 70 ~~~~~l~~~la~~~g~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~g~~~vl~~~~~y~~~~~~~~~~~~~~~~~~~~~~ 149 (375)
T 2eh6_A 70 PWQEELAHKLVKHFWTEGKVFFANSGTESVEAAIKLARKYWRDKGKNKWKFISFENSFHGRTYGSLSATGQPKFHKGFEP 149 (375)
T ss_dssp HHHHHHHHHHHHTSSSCEEEEEESSHHHHHHHHHHHHHHHHHHTTCCCCEEEEEBTCCCCSSHHHHHHCBCGGGTTTTCS
T ss_pred HHHHHHHHHHHhhcCCCCeEEEeCchHHHHHHHHHHHHHHhccCCCCCCEEEEECCCcCCCchhhhhhcCCccccCCCCC
Confidence 4577899999999998 677788888899874432 34 788 99999999998765433222111 122
Q ss_pred ---EEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCccC---CCC
Q 016612 120 ---VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR---PLE 188 (386)
Q Consensus 120 ---~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~~---~~~ 188 (386)
.+..++..|++++++++++++++|++++++||||.+.+ +++|.++|+++|+++|+|++|+ .+.... ...
T Consensus 150 ~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~ 229 (375)
T 2eh6_A 150 LVPGFSYAKLNDIDSVYKLLDEETAGIIIEVIQGEGGVNEASEDFLSKLQEICKEKDVLLIIDEVQTGIGRTGEFYAYQH 229 (375)
T ss_dssp CCSSEEEECTTCHHHHHTTCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGG
T ss_pred CCCCceeCCCchHHHHHHHhcCCeEEEEEeCccCCCCCcCCCHHHHHHHHHHHHHhCCEEEEeccccCCCCCCcchhhhh
Confidence 26667777999999999989999999999999999987 9999999999999999999998 332221 122
Q ss_pred CC--ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 016612 189 LG--ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 189 ~~--~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 266 (386)
.+ .|++ |+||++++ |+|+|++++++ ++.+.+.........+.++..+.++...++......++..++.+.+.+
T Consensus 230 ~~~~~d~~--s~SK~~~~--g~~~G~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~ 304 (375)
T 2eh6_A 230 FNLKPDVI--ALAKGLGG--GVPIGAILARE-EVAQSFTPGSHGSTFGGNPLACRAGTVVVDEVEKLLPHVREVGNYFKE 304 (375)
T ss_dssp GTCCCSEE--EECGGGGT--TSCCEEEEEEH-HHHTTCCTTSCCCSSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCEE--EEcccccC--CCCeEEEEEcH-HHHhhhcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34 6777 56799963 67899999874 454433321122223445565655555444333334445555566666
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCC
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 346 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~ 346 (386)
.+++.+. . ..++.+.++++.++.. ..++.+.+...|+.+.++
T Consensus 305 ~L~~~~~---------~----------~~~~~g~~~~~~~~~~--~~~~~~~l~~~gi~~~~~----------------- 346 (375)
T 2eh6_A 305 KLKELGK---------G----------KVKGRGLMLGLELERE--CKDYVLKALEKGLLINCT----------------- 346 (375)
T ss_dssp HHHHTTS---------S----------EEEEETTEEEEECSSC--CHHHHHHHHHTTEECEEE-----------------
T ss_pred HHHHHhc---------C----------CceEEEEEEEEEEcCc--HHHHHHHHHHCCCEEecC-----------------
Confidence 6655321 0 0123467888887531 344555555567765432
Q ss_pred CHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHH
Q 016612 347 PVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKA 380 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~ 380 (386)
.++++|++++. ++++++++.|+++
T Consensus 347 ----------~~~~iRi~~~~~~~~~~i~~~~~~l~~~ 374 (375)
T 2eh6_A 347 ----------AGKVLRFLPPLIIQKEHIDRAISVLREI 374 (375)
T ss_dssp ----------TTTEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ----------CCCEEEEECCCCCCHHHHHHHHHHHHHh
Confidence 14569999864 4455555555443
No 146
>1uu1_A Histidinol-phosphate aminotransferase; histidine biosynthesis, pyridoxal phosphate, complete proteome; HET: PMP HSA; 2.38A {Thermotoga maritima} SCOP: c.67.1.1 PDB: 1uu0_A 1h1c_A* 1uu2_A* 2f8j_A*
Probab=99.92 E-value=4.9e-24 Score=195.61 Aligned_cols=235 Identities=9% Similarity=0.087 Sum_probs=158.8
Q ss_pred HHHHHHHHHhhcC---CC--ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 57 RDALESLLAKLDK---AD--RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 57 ~~~l~~~l~~~~g---~~--~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
..++++.++++++ .+ +.++++++++++..++..+ ||+|+++ |+|+++. ..++..|.+++.++.+
T Consensus 58 ~~~lr~~la~~~~~~~~~~~~v~~~~G~~~al~~~~~~~--gd~Vl~~-p~y~~~~----~~~~~~g~~~~~v~~~~~~~ 130 (335)
T 1uu1_A 58 DEELIEKILSYLDTDFLSKNNVSVGNGADEIIYVMMLMF--DRSVFFP-PTYSCYR----IFAKAVGAKFLEVPLTKDLR 130 (335)
T ss_dssp CHHHHHHHHHHHTCSSCCGGGEEEESSHHHHHHHHHHHS--SEEEECS-SSCHHHH----HHHHHHTCEEEECCCCTTSC
T ss_pred hHHHHHHHHHHcCCCCCCHHHEEEcCChHHHHHHHHHHh--CCcEEEC-CCcHHHH----HHHHHcCCeEEEeccCCCCC
Confidence 4567777777777 43 4556666679998766655 8999999 9998875 4445678899888764
Q ss_pred -CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC----ccCCCCCCccEEEecccccc
Q 016612 128 -DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV----LSRPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 -d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~----~~~~~~~~~di~~~S~sK~~ 202 (386)
|++++ +++++|++++|+||||.+.+.+++.++++..| ++|+|++|+... .......+.+++++|+||++
T Consensus 131 ~d~~~l-----~~~~~v~l~~p~nptG~~~~~~~l~~l~~~~~-~li~De~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~ 204 (335)
T 1uu1_A 131 IPEVNV-----GEGDVVFIPNPNNPTGHVFEREEIERILKTGA-FVALDEAYYEFHGESYVDFLKKYENLAVIRTFSKAF 204 (335)
T ss_dssp CCCCCC-----CTTEEEEEESSCTTTCCCCCHHHHHHHHHTTC-EEEEECTTHHHHCCCCGGGGGTCSSEEEEEESTTTT
T ss_pred CCHHHc-----CCCCEEEEeCCCCCCCCCCCHHHHHHHHHhCC-EEEEECcchhhcchhHHHHhhhCCCEEEEecchhhc
Confidence 33443 57899999999999999999999999999888 999999986321 11112346789999999999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---HHHHHHHHHHHHHHHHHHHhhCCCcceEec
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---MALRVEKQQDNAQKIAEFLASHPRVKKVNY 279 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~ 279 (386)
|++|+|+|+++++ +++.+.+...... ...+...+.++...++. +....++..++.+.+.+.+++..
T Consensus 205 -g~~G~r~G~~~~~-~~~~~~l~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~L~~~g------- 273 (335)
T 1uu1_A 205 -SLAAQRVGYVVAS-EKFIDAYNRVRLP--FNVSYVSQMFAKVALDHREIFEERTKFIVEERERMKSALREMG------- 273 (335)
T ss_dssp -TCGGGCCEEEEEC-HHHHHHHHHHSCT--TCSCHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHT-------
T ss_pred -CCcccCeEEEEeC-HHHHHHHHHhcCC--CCcCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHCC-------
Confidence 5568899999995 5566655544322 34555556555554443 22333444455555555555421
Q ss_pred CCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCC
Q 016612 280 AGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSF 328 (386)
Q Consensus 280 ~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~ 328 (386)
+. +. +..++++++.++. .....+.+.+..+|+.+++
T Consensus 274 --~~------~~----~~~~~~~~~~~~~-~~~~~~~~~l~~~gi~v~~ 309 (335)
T 1uu1_A 274 --YR------IT----DSRGNFVFVFMEK-EEKERLLEHLRTKNVAVRS 309 (335)
T ss_dssp --CC------BC----CCCSSEEEEECCT-HHHHHHHHHHHHHTEEEEE
T ss_pred --cE------Ec----CCCCeEEEEECCC-CCHHHHHHHHHHCCEEEEE
Confidence 11 10 1235678888765 3355677777677876553
No 147
>1qz9_A Kynureninase; kynurenine, tryptophan, PLP, vitamin B6, pyridoxal-5'-phosph hydrolase; HET: PLP P3G; 1.85A {Pseudomonas fluorescens} SCOP: c.67.1.3
Probab=99.92 E-value=1e-24 Score=206.00 Aligned_cols=283 Identities=16% Similarity=0.156 Sum_probs=186.1
Q ss_pred chHHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHHhc------CCCCE-EEecCCCCCcHHHHHhhhcccC--CcEEE
Q 016612 55 PTRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL------GTGEE-IVAGDDLYGGTDRLLSRVTPKT--GVVVK 122 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~~~------~~g~~-Vlv~~~~~~~~~~~~~~~~~~~--g~~~~ 122 (386)
+...++++.+++++|.+ +.+++++|++++. ++..++ ++||+ |+++.+.|+++...+....+.. |.+++
T Consensus 71 ~~~~~l~~~la~~~g~~~~~v~~~~g~t~al~~al~~~~~~~~~~~~gd~vii~~~~~~~~~~~~~~~~~~~~~~g~~~~ 150 (416)
T 1qz9_A 71 DLSERLGNRLATLIGARDGEVVVTDTTSINLFKVLSAALRVQATRSPERRVIVTETSNFPTDLYIAEGLADMLQQGYTLR 150 (416)
T ss_dssp GHHHHHHHHHHTTTTCCTTSEEECSCHHHHHHHHHHHHHHHHHHHSTTCCEEEEETTSCHHHHHHHHHHHHHHCSSCEEE
T ss_pred HHHHHHHHHHHHHcCCCcccEEEeCChhHHHHHHHHhhcccccccCCCCcEEEEcCCCCCchHHHHHHHHHHhcCCceEE
Confidence 47889999999999986 4556666678886 455454 89987 5566668877665543333333 88999
Q ss_pred EeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC-CCCCccEEEeccccc
Q 016612 123 RVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP-LELGADIVMHSATKF 201 (386)
Q Consensus 123 ~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~-~~~~~di~~~S~sK~ 201 (386)
.++. ++++++.+++++++|++++++||||.+.|+++|.++|+++|+++|+|++|+.+..... ...+.|++++|+||+
T Consensus 151 ~v~~--~~~l~~~i~~~~~~v~~~~~~nptG~~~~l~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~d~~~~s~~K~ 228 (416)
T 1qz9_A 151 LVDS--PEELPQAIDQDTAVVMLTHVNYKTGYMHDMQALTALSHECGALAIWDLAHSAGAVPVDLHQAGADYAIGCTYKY 228 (416)
T ss_dssp EESS--GGGHHHHCSTTEEEEEEESBCTTTCBBCCHHHHHHHHHHHTCEEEEECTTTTTTSCCCHHHHTCSEEEECSSST
T ss_pred EeCc--HHHHHHHhCCCceEEEEeccccCcccccCHHHHHHHHHHcCCEEEEEccccccCcCCChhhcCCCEEEecCccc
Confidence 9987 8899999988999999999999999999999999999999999999999987654322 234689999999999
Q ss_pred cccCCCceE-EEEEEcChhHHHHHHHhh-----------------------hhcCCCCChhhHHHHHhcC-----CcHHH
Q 016612 202 IAGHSDVMA-GVLAVKGERLAKELYFLQ-----------------------NAEGSGLAPFDCWICLRGV-----KTMAL 252 (386)
Q Consensus 202 ~~g~~g~~~-G~i~~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~-----~~~~~ 252 (386)
+.++.+ + |+++++++ +.+.+.... .......+......+..++ ..+..
T Consensus 229 l~~g~~--~~g~l~~~~~-~~~~l~~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~ 305 (416)
T 1qz9_A 229 LNGGPG--SQAFVWVSPQ-LCDLVPQPLSGWFGHSRQFAMEPRYEPSNGIARYLCGTQPITSLAMVECGLDVFAQTDMAS 305 (416)
T ss_dssp TCCCTT--CCCEEEECTT-TTTTSCCSCCCGGGBCTTSCCCSSCCBCSSGGGGCCSCCCHHHHHHHHHHHHHHTTSCHHH
T ss_pred CCCCCC--CeEEEEECHH-HHhccCCCccccCccccccCCCCccCCCcchHHhcCCCCCHHHHHHHHHHHHHHHhcCHHH
Confidence 855444 5 99998755 322222110 0011122332222222221 23444
Q ss_pred HHHHHHHHHHHHHHHHhhC-CCcceEecCCCCCCCchhhhhhc-cCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCC
Q 016612 253 RVEKQQDNAQKIAEFLASH-PRVKKVNYAGLPEHPGHELHYSQ-AKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGS 330 (386)
Q Consensus 253 ~~~~~~~~~~~l~~~l~~~-~~~~~~~~~~l~~~~~~~i~~~~-~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~ 330 (386)
..++..++.+.+.+.|++. +. .++ .++.+. ....++++++.+++ ...+.+.+...|+.+.+.
T Consensus 306 ~~~~~~~~~~~l~~~L~~~~~~------~g~------~~~~~~~~~~~~~~~~~~~~~---~~~l~~~l~~~gi~~~~~- 369 (416)
T 1qz9_A 306 LRRKSLALTDLFIELVEQRCAA------HEL------TLVTPREHAKRGSHVSFEHPE---GYAVIQALIDRGVIGDYR- 369 (416)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTT------SCC------EECSCSSGGGBCSEEEEECTT---HHHHHHHHHTTTEECEEE-
T ss_pred HHHHHHHHHHHHHHHHHhhccC------CCe------EEeCCCCHHHcCCEEEEecCC---HHHHHHHHHhCCcEeccC-
Confidence 5556666677777777653 20 011 111000 00135778888764 455666666667754210
Q ss_pred ccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-----cCChHHHHHHHHHHHhcC
Q 016612 331 VKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 331 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-----~~~~~~~i~~l~~~l~~~ 384 (386)
.++++||+++ .++++++++.|++++++.
T Consensus 370 --------------------------~~~~lRis~~~~~~t~~~i~~~~~~l~~~~~~~ 402 (416)
T 1qz9_A 370 --------------------------EPRIMRFGFTPLYTTFTEVWDAVQILGEILDRK 402 (416)
T ss_dssp --------------------------TTTEEEEECCTTTCCHHHHHHHHHHHHHHHHHT
T ss_pred --------------------------CCCeEEEeCcccCCCHHHHHHHHHHHHHHHhcc
Confidence 2466999986 377778888888777653
No 148
>2fnu_A Aminotransferase; protein-product complex, structural genomics, montreal-kings bacterial structural genomics initiative, BSGI; HET: PMP UD1; 1.50A {Helicobacter pylori} SCOP: c.67.1.4 PDB: 2fni_A* 2fn6_A*
Probab=99.92 E-value=4.4e-23 Score=192.03 Aligned_cols=300 Identities=14% Similarity=0.127 Sum_probs=194.5
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh---cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+...++++.+++++|.++.++++||++|+. ++.++ +++||+|+++.++|+++... ++..|.+++.++.+
T Consensus 32 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~~~~~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~ 107 (375)
T 2fnu_A 32 KRSLLFEEALCEFLGVKHALVFNSATSALLTLYRNFSEFSADRNEIITTPISFVATANM----LLESGYTPVFAGIKNDG 107 (375)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHSSCCCTTSCEEEECSSSCTHHHHH----HHHTTCEEEECCBCTTS
T ss_pred hHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHhcccCCCCCEEEECCCccHhHHHH----HHHCCCEEEEeccCCCC
Confidence 567899999999999988888889999987 45556 78999999999999998644 34578999988864
Q ss_pred --CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCC--CCCCccEEEeccc--cc
Q 016612 128 --DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRP--LELGADIVMHSAT--KF 201 (386)
Q Consensus 128 --d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~--~~~~~di~~~S~s--K~ 201 (386)
|++++++.+++++++|+++++ +|.+.|+++|.++|+++|+++|+|++|+.+..... ...-.|+++.|+| |+
T Consensus 108 ~~d~~~l~~~i~~~~~~v~~~~~---tG~~~~l~~i~~l~~~~~~~li~D~a~~~~~~~~~~~~~~~~~i~~~s~s~~K~ 184 (375)
T 2fnu_A 108 NIDELALEKLINERTKAIVSVDY---AGKSVEVESVQKLCKKHSLSFLSDSSHALGSEYQNKKVGGFALASVFSFHAIKP 184 (375)
T ss_dssp SBCGGGSGGGCCTTEEEEEEECG---GGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSS
T ss_pred CCCHHHHHhhcCcCceEEEEeCC---cCCccCHHHHHHHHHHcCCEEEEECccccCCeECCeeccccCCeEEEeCCCCCC
Confidence 789999999888999888776 89999999999999999999999999987764322 1111378888887 99
Q ss_pred cccCCCceEEEEEE-cChhHHHHHHHhhhhc--------------C--CCCChhhHHHHHhcCCcHHHHHHHHHHHHHHH
Q 016612 202 IAGHSDVMAGVLAV-KGERLAKELYFLQNAE--------------G--SGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 264 (386)
Q Consensus 202 ~~g~~g~~~G~i~~-~~~~~~~~~~~~~~~~--------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (386)
+ ++ | .|++++ +++++.+.+....... + ..+++..+.+....+..+....++..++.+.+
T Consensus 185 ~-~~-g--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~l 260 (375)
T 2fnu_A 185 I-TT-A--EGGAVVTNDSELHEKMKLFRSHGMLKKDFFEGEVKSIGHNFRLNEIQSALGLSQLKKAPFLMQKREEAALTY 260 (375)
T ss_dssp S-CC-S--SCEEEEESCHHHHHHHHHHTBTTEEESSSSCEEESSCCCBCCCCHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred c-cc-c--CceEEEeCCHHHHHHHHHHHhcCCccccccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9 55 5 355555 5566665555443211 1 13455555554444555666666677777777
Q ss_pred HHHHhhCCCcceEecCCCCCCCchhhhhhc--cCCCCceEEEEeCCH-H-hHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 265 AEFLASHPRVKKVNYAGLPEHPGHELHYSQ--AKGAGSVLSFLTGSL-A-LSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~--~~~~~~~~~~~~~~~-~-~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
.+.|++.+. ..+.... ......++++.++.. . ....+.+.+...|+.++.+.. .....+..
T Consensus 261 ~~~L~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~v~~~~~-p~~~~~~~ 325 (375)
T 2fnu_A 261 DRIFKDNPY--------------FTPLHPLLKDKSSNHLYPILMHQKFFTCKKLILESLHKRGILAQVHYK-PIYQYQLY 325 (375)
T ss_dssp HHHHTTCSS--------------EEESGGGCSSCCCCSCEEEEECGGGGGGHHHHHHHHHHTTEECBCCCC-CGGGSHHH
T ss_pred HHHhhcCCC--------------ccccCCCCCCCcceEEEEEEeCccccchHHHHHHHHHHCCCCcccccc-ccccchhh
Confidence 777776432 1111110 011234456666432 1 366777777777887662211 11100100
Q ss_pred c---cCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 341 M---SHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 341 ~---~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
. ....++... ...++++||+++. ++++++++.|++++++.
T Consensus 326 ~~~~~~~~~~~~~----~~~~~~lRi~~~~~~t~~~i~~~~~~l~~~~~~~ 372 (375)
T 2fnu_A 326 QQLFNTAPLKSAE----DFYHAEISLPCHANLNLESVQNIAHSVLKTFESF 372 (375)
T ss_dssp HHHHCCCCCHHHH----HHHHHEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCccCChHHH----HHHhCEEEecCCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0 000011000 0013579999974 66667777777766543
No 149
>3mc6_A Sphingosine-1-phosphate lyase; carboxy-lyase activity, pyridoxyl phosphate; HET: LLP; 3.15A {Saccharomyces cerevisiae}
Probab=99.92 E-value=4.1e-24 Score=206.66 Aligned_cols=278 Identities=18% Similarity=0.204 Sum_probs=191.9
Q ss_pred hHHHHHHHHHhhcCCC----ceEEeCcHHHHHH-HHHHhcC-----CC---CEEEecCCCCCcHHHHHhhhcccCCcEEE
Q 016612 56 TRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG-----TG---EEIVAGDDLYGGTDRLLSRVTPKTGVVVK 122 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~----~~i~~~~gt~al~-~~~~~~~-----~g---~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~ 122 (386)
+.+++.+++++++|.+ ..+++++|++++. ++.++++ +| |+|+++.+.|+++. ..++..|++++
T Consensus 108 l~~~~~~~la~~~g~~~~~~~~~~~~ggt~a~~~a~~a~~~~~~~~~g~~~~~Vi~~~~~h~~~~----~~~~~~G~~~~ 183 (497)
T 3mc6_A 108 MESEVVSMVLRMFNAPSDTGCGTTTSGGTESLLLACLSAKMYALHHRGITEPEIIAPVTAHAGFD----KAAYYFGMKLR 183 (497)
T ss_dssp HHHHHHHHHHHHTTCCTTTCCEEEESSHHHHHHHHHHHHHHHHHHHSCCSSCEEEEETTSCHHHH----HHHHHSCCEEE
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCceEEEeCCccHHHH----HHHHHcCCeEE
Confidence 5778889999999876 4677778888886 4444543 56 89999999999885 45566789999
Q ss_pred EeCCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-----------c--
Q 016612 123 RVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----------L-- 183 (386)
Q Consensus 123 ~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-----------~-- 183 (386)
.++.+ |+++|++++++++++|++++|+||+|.+.|+++|.++|+++|+++|+|++|+.+. .
T Consensus 184 ~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~p~nptG~~~~l~~i~~la~~~g~~livD~a~~~~~~~f~~~~~~~~~~~ 263 (497)
T 3mc6_A 184 HVELDPTTYQVDLGKVKKFINKNTVLLVGSAPNFPHGIADDIEGLGKIAQKYKLPLHVDSCLGSFIVSFMEKAGYKNLPL 263 (497)
T ss_dssp EECBCTTTCSBCTTTTGGGCCSSEEEEEEETTCTTTCCCCSCTTTTTHHHHTTCCEEEETTTTHHHHGGGTTTTCCSCCC
T ss_pred EEecCcccCcCCHHHHHHHHhhCCEEEEEECCCCCCCcCCCHHHHHHHHHHhCCEEEEECcchhhhhhhhhhhcccCCcc
Confidence 88754 5899999999999999999999999999999999999999999999999987321 1
Q ss_pred cCCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh--cC---C-CC----C---hhhHHHHHhcCC--
Q 016612 184 SRPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EG---S-GL----A---PFDCWICLRGVK-- 248 (386)
Q Consensus 184 ~~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--~~---~-~~----~---~~~~~~~~~~~~-- 248 (386)
.+....++|+++.|++|++.++.+ +|+++++++.+.+........ .+ . .. . ....++.+..+.
T Consensus 264 ~~~~~~g~d~~~~s~~K~l~~~~~--~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~aal~~l~~~ 341 (497)
T 3mc6_A 264 LDFRVPGVTSISCDTHKYGFAPKG--SSVIMYRNSDLRMHQYYVNPAWTGGLYGSPTLAGSRPGAIVVGCWATMVNMGEN 341 (497)
T ss_dssp CSTTSTTCCEEEEETTTTTCCCSS--CEEEECSSHHHHTTTSCCBTTCTTSCBCCSSSCSSCBHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCCcEEEECchhhcCCCCC--ceeEEecCHHHHhhhhcccccccCCCcCCcCcccCCcchhHHHHHHHHHHHhHH
Confidence 123345789999999999866654 799998876543321111000 00 0 00 0 122333333222
Q ss_pred cHHHHHHHHHHHHHHHHHHHhh-CCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccC
Q 016612 249 TMALRVEKQQDNAQKIAEFLAS-HPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS 327 (386)
Q Consensus 249 ~~~~~~~~~~~~~~~l~~~l~~-~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~ 327 (386)
.+....++..++++.+.+.+++ .+.+ .++. ...+++++|...+. ...++.+.+...|+.++
T Consensus 342 ~~~~~~~~~~~~~~~l~~~L~~~~~g~--------------~~~~---~~~~~~v~~~~~~~-~~~~l~~~L~~~Gi~v~ 403 (497)
T 3mc6_A 342 GYIESCQEIVGAAMKFKKYIQENIPDL--------------DIMG---NPRYSVISFSSKTL-NIHELSDRLSKKGWHFN 403 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSCTTC--------------EECS---CCCSSEEEEECTTT-THHHHHHHHHTTTCBCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCE--------------EEec---CCCeeEEEEeCCCC-CHHHHHHHHHhCCEEEe
Confidence 2344455666777777888776 3321 1110 12457788876542 35677777777787654
Q ss_pred CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhc
Q 016612 328 FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 383 (386)
Q Consensus 328 ~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~ 383 (386)
.+.. +..+|++++ .++++++++.|++++++
T Consensus 404 ~~~~--------------------------~~~~ri~~~~~t~e~i~~~~~~L~~~l~~ 436 (497)
T 3mc6_A 404 ALQK--------------------------PVALHMAFTRLSAHVVDEICDILRTTVQE 436 (497)
T ss_dssp ECCS--------------------------SCCEEEECCTTTTCTHHHHHHHHHHHHHH
T ss_pred cCCC--------------------------CCeEEEEEeCCCHHHHHHHHHHHHHHHHH
Confidence 3221 234888885 59999999999998865
No 150
>2dkj_A Serine hydroxymethyltransferase; PLP dependent enzyme, structural genomics; HET: PLP; 1.15A {Thermus thermophilus}
Probab=99.92 E-value=7.4e-24 Score=199.51 Aligned_cols=283 Identities=20% Similarity=0.136 Sum_probs=184.4
Q ss_pred HHHHHHhhcCCCce-EEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCC------CCH
Q 016612 60 LESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNT------CDL 129 (386)
Q Consensus 60 l~~~l~~~~g~~~~-i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~------~d~ 129 (386)
+++++++++|.+.. +++++|++++. ++..++++||+|++++|.|+++.... ..++..|. ..+.++. .|+
T Consensus 74 ar~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d~ 152 (407)
T 2dkj_A 74 AIERAKALFGAAWANVQPHSGSQANMAVYMALMEPGDTLMGMDLAAGGHLTHG-SRVNFSGKLYKVVSYGVRPDTELIDL 152 (407)
T ss_dssp HHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGT-CTTSHHHHHSEEEEECCCTTTSSCCH
T ss_pred HHHHHHHHhCCCcceEEecchHHHHHHHHHHhcCCCCEEEEecccccCccchH-HHHHhcCceEEEEecCCCcccCccCH
Confidence 34589999998854 67789998887 45557899999999999998773111 22333344 4444431 389
Q ss_pred HHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCCCccEEEeccccccc
Q 016612 130 DEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSATKFIA 203 (386)
Q Consensus 130 ~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~di~~~S~sK~~~ 203 (386)
+++++.+++ ++++|++++|+|| ...|+++|.++|+++|+++|+|++|+.|... .... ..|++++|+||+++
T Consensus 153 ~~l~~~l~~~~~~~v~~~~p~~~--~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l~ 229 (407)
T 2dkj_A 153 EEVRRLALEHRPKVIVAGASAYP--RFWDFKAFREIADEVGAYLVVDMAHFAGLVAAGLHPNPLP-YAHVVTSTTHKTLR 229 (407)
T ss_dssp HHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTCSCCCTT-TCSEEEEESSGGGC
T ss_pred HHHHHHHhhcCCeEEEEeccccC--CCCCHHHHHHHHHHcCCEEEEEccccccccccCccCCccc-cccEEEEeccccCC
Confidence 999999874 8999999999997 6779999999999999999999999864321 1122 47999999999886
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhhhhcCC-CCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHHhhCCCcceE
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 277 (386)
|+ ++|+++++++++.+.+......... ..+......+..+++ .+....++..++.+.+.+.|++..
T Consensus 230 g~---~~G~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----- 301 (407)
T 2dkj_A 230 GP---RGGLILSNDPELGKRIDKLIFPGIQGGPLEHVIAGKAVAFFEALQPEFKEYSRLVVENAKRLAEELARRG----- 301 (407)
T ss_dssp CC---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred CC---CceEEEECCHHHHHHHHhhhcccccCCCcHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 54 5799999755666655544432222 233322222222222 223444555556666666666531
Q ss_pred ecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 278 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 278 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+.++.. +..++++++.++.. .....+.+.+...|+.+.+|........+ .
T Consensus 302 ----------~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~~~~~~~~-----------------~ 352 (407)
T 2dkj_A 302 ----------YRIVTG--GTDNHLFLVDLRPKGLTGKEAEERLDAVGITVNKNAIPFDPKPP-----------------R 352 (407)
T ss_dssp ----------CEEGGG--SCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCCTTCSSCT-----------------T
T ss_pred ----------ceeecC--CCCceEEEEECcccCCCHHHHHHHHHHcCceecCCcCccccccc-----------------c
Confidence 111111 23567888887531 13556777777778887766531000000 1
Q ss_pred CCCeEEEEec--------cCChHHHHHHHHHHHhc
Q 016612 357 TEDLVRISVG--------IEDVNDLISDLDKALRT 383 (386)
Q Consensus 357 ~~~~iRis~~--------~~~~~~~i~~l~~~l~~ 383 (386)
.++++|+|++ .++++++++.|++++++
T Consensus 353 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~ 387 (407)
T 2dkj_A 353 VTSGIRIGTPAITTRGFTPEEMPLVAELIDRALLE 387 (407)
T ss_dssp TCSEEEEECHHHHHTTCCGGGHHHHHHHHHHHHHH
T ss_pred CCCceeeecccccccCCCHHHHHHHHHHHHHHHhc
Confidence 2567999983 58899999999988865
No 151
>3ke3_A Putative serine-pyruvate aminotransferase; structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: LLP; 2.20A {Psychrobacter arcticus 273-4}
Probab=99.92 E-value=1.7e-23 Score=195.34 Aligned_cols=288 Identities=15% Similarity=0.168 Sum_probs=185.8
Q ss_pred chHHHHHHHHHhhcCCCceEE-eCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeC------
Q 016612 55 PTRDALESLLAKLDKADRALC-FTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVN------ 125 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~-~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~------ 125 (386)
+.++++++.+++++|.++.++ ++|||+++++++..+++||+|++.++.|++.. +..+++..| .+++.++
T Consensus 35 ~~~~~~~~~l~~~~~~~~~v~~~~sgt~a~~~~~~~~~~gd~vi~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~g~ 112 (379)
T 3ke3_A 35 EVMNDLLSNLKTVYNAEAAVIIPGSGTYGMEAVARQLTIDEDCLIIRNGWFSYR--WTQILEKGKFAKSSTVLTAERTED 112 (379)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHHHHCTTCEEEEEECSHHHHH--HHHHHHHHCCSSEEEEEECEESSC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEcCChhHHHHHHHHhCCCCCeEEEEeCCchhHH--HHHHHHHhCCCCceEEEecccccc
Confidence 367889999999999886555 46788999877777889999999999887653 223444444 3555543
Q ss_pred --------CCCHHHHHhhhC-CCceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCcc
Q 016612 126 --------TCDLDEVASAIG-PWTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGAD 192 (386)
Q Consensus 126 --------~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~d 192 (386)
..|++++++.++ +++++|++++++|++|.+.| +++|.++|+++|+++|+|++++ +... +....+.|
T Consensus 113 ~~~~~~~~~~d~~~l~~~i~~~~~~~v~~~~~~~~~G~~~~~~~l~~i~~~~~~~~~~li~D~~~~-g~~~~~~~~~~~d 191 (379)
T 3ke3_A 113 TEAPKPFAPVDIETAVAKIKEDKSAIVYAPHVETSSGIILSEEYIKALSEAVHSVGGLLVIDCIAS-GCVWLDMKELGID 191 (379)
T ss_dssp CSSCCCEECCCHHHHHHHHHHHTCSEEEEESEETTTTEECCHHHHHHHHHHHHHTTCEEEEECTTC-TTCCCCHHHHTCS
T ss_pred ccccCCCCCCCHHHHHHHHhhcCCcEEEEEeecCCCceeCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccccccccCCC
Confidence 258999999885 58999999999999999999 9999999999999999999998 6432 22335889
Q ss_pred EEEeccccccccCCCceEEEEEEcChhHHHHHHHhhh-----------------hcC-----CCCChhhHHHHHhcCCc-
Q 016612 193 IVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-----------------AEG-----SGLAPFDCWICLRGVKT- 249 (386)
Q Consensus 193 i~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~-----------------~~~-----~~~~~~~~~~~~~~~~~- 249 (386)
++++|++|++++|+| +|+++++++ +.+.+..... ..+ ...+....+.+..+++.
T Consensus 192 ~~~~s~~K~l~~~~g--~g~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~t~~~~~~~a~~aal~~~ 268 (379)
T 3ke3_A 192 VLISAPQKGWSSTPC--AGLVMLSAA-AIKKVESTESNCFSLDLKQWLTIMRAYENGGHAYHATMPTDSLRQFRDAILEA 268 (379)
T ss_dssp EEEECTTTTTCSCCC--EEEEEECHH-HHHHHHTCCCSCSTTCHHHHHHHHHHHHTTSCCCSSCCCHHHHHHHHHHHHHH
T ss_pred EEEecchhhcCCCCc--eEEEEECHH-HHHhhhcCCCCceeecHHHHHHHHHhhhccCCCCCCCCCHHHHHHHHHHHHHH
Confidence 999999999988876 799998744 4443332100 001 12233333333333322
Q ss_pred ----HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCHHhHHHHHhhcCccee
Q 016612 250 ----MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSI 324 (386)
Q Consensus 250 ----~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~gi 324 (386)
+....++..+..+.+.+.+++.. +. ++.. +..+++ +..+..++... .+.+.+..+|+
T Consensus 269 ~~~g~~~~~~~~~~l~~~l~~~l~~~g---------~~------~~~~-~~~~~~~i~~~~~~~~~~--~~~~~L~~~Gi 330 (379)
T 3ke3_A 269 KEIGFDILRDAQWELGNRVRKVLTDKG---------IE------SVAA-EGFEAPGVVVSYTERDDM--HKGSAFAEAGL 330 (379)
T ss_dssp HHHCHHHHHHHHHHHHHHHHHHHHHTT---------CC------BSBC-TTCBCSSEEEEECSCHHH--HSSHHHHHTTC
T ss_pred HHhcHHHHHHHHHHHHHHHHHHHHHcC---------CE------ecCC-ccccCceEEEEccCCcch--HHHHHHHHCCe
Confidence 23333444455555566665532 11 1100 011233 34444454432 12444555677
Q ss_pred ccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 325 TVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 325 ~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+.+|.... +..| ...+.+|+|++ .++++++++.|+++++++
T Consensus 331 ~v~~g~~~~-~~~~-----------------~~~~~lRis~~~~~t~~di~~~~~~l~~~l~~~ 376 (379)
T 3ke3_A 331 QIAAGVPLK-VGEP-----------------DNFKTFRLGLFGLDKLTDIDGTVERFEKALDEV 376 (379)
T ss_dssp CCEECCCCS-SCCC-----------------TTCCEEEEECCSHHHHTCHHHHHHHHHHHHHHH
T ss_pred EEeCCcccc-cccc-----------------CcCCEEEEeCCcCCCHHHHHHHHHHHHHHHHHh
Confidence 666654311 0001 12577999985 499999999999888753
No 152
>2zy4_A L-aspartate beta-decarboxylase; pyridoxal 5'-phosphate, aminotransferase, lyase; HET: PLP; 2.00A {Alcaligenes faecalis subsp} PDB: 2zy3_A* 2zy5_A* 3fdd_A* 2zy2_A*
Probab=99.92 E-value=1.4e-23 Score=204.12 Aligned_cols=175 Identities=16% Similarity=0.218 Sum_probs=128.4
Q ss_pred ccccCC-CCc-hHHHHHH-HHHhhcCC------CceEEeCcH-HHHHHHHH-H-----hcCCCCEEEecCCCCCcHHHHH
Q 016612 47 YDYTRS-GNP-TRDALES-LLAKLDKA------DRALCFTSG-MAALAAVT-H-----LLGTGEEIVAGDDLYGGTDRLL 110 (386)
Q Consensus 47 ~~y~~~-g~~-~~~~l~~-~l~~~~g~------~~~i~~~~g-t~al~~~~-~-----~~~~g~~Vlv~~~~~~~~~~~~ 110 (386)
..|... |.+ +++++.+ ++.+..+. ++.|++++| ++++..++ . ++++||.|++++|.|+++....
T Consensus 132 ~~Y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~~~~~I~~t~G~~eal~~~~~~l~~~~l~~~Gd~Vlv~~P~y~~~~~~~ 211 (546)
T 2zy4_A 132 CNYPVPPRMLNISEKIVRQYIIREMGADAIPSESVNLFAVEGGTAAMAYIFESLKLNGLLKAGDKVAIGMPVFTPYIEIP 211 (546)
T ss_dssp CSCCSSSSCCHHHHHHHHHHHHHHTTCTTSCGGGEEEEEEEHHHHHHHHHHHHHHHTTSSCTTCEEEEEESCCHHHHHHH
T ss_pred CCCCCCcCCHHHHHHHHHHHHHHhccCCCCCCCcceEEEECCHHHHHHHHHHHhhhhhcCCCCCEEEEeCCCCccHHHHH
Confidence 468776 665 7777554 44444321 245555555 58887544 3 4789999999999999886432
Q ss_pred hhhcccCCcEEEEeCC-------CCHHHHHhhhCCCceEEEEeCCCCCCccccc---HHHHHHHH--HHcCCEEEEeCCC
Q 016612 111 SRVTPKTGVVVKRVNT-------CDLDEVASAIGPWTKLVWVESPTNPRQQICD---IRKIAEMA--HAHGALLLVDNSI 178 (386)
Q Consensus 111 ~~~~~~~g~~~~~v~~-------~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~---l~~i~~la--~~~~~~li~D~a~ 178 (386)
.....|.+++.++. .|++++++.+++++++|++++|+||||.+.+ +++|.++| +++|++||+||+|
T Consensus 212 --~~~~~g~~~~~v~~~~~~~~~~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~~~~l~~l~~~a~~~~~~~~ii~De~y 289 (546)
T 2zy4_A 212 --ELAQYALEEVAINADPSLNWQYPDSELDKLKDPAIKIFFCVNPSNPPSVKMDQRSLERVRNIVAEHRPDLMILTDDVY 289 (546)
T ss_dssp --HSTTSCCEEEEEECBGGGTTBCCHHHHGGGGSTTEEEEEEESSCSSSCBCCCHHHHHHHHHHHHHTCTTCEEEEECTT
T ss_pred --HHcCCCcEEEEEecCcccCCCCCHHHHHHhhCCCCeEEEEECCCCCCCccCCHHHHHHHHHHHHhccCCcEEEEeCcc
Confidence 23456788888875 3788999888889999999999999999986 67788998 7789999999999
Q ss_pred CCCCcc--CCC--CCCccEEEeccccccccCCCceEEEEEEcChhHHHHH
Q 016612 179 MSPVLS--RPL--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKEL 224 (386)
Q Consensus 179 ~~~~~~--~~~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~ 224 (386)
+..... +.. ..+.++++.|+||++ |.+|+|+||++++++++.+.+
T Consensus 290 ~~~~~~~~s~~~~~~~~~i~~~S~SK~~-g~~GlRiG~~~~~~~~l~~~l 338 (546)
T 2zy4_A 290 GTFADDFQSLFAICPENTLLVYSFSKYF-GATGWRLGVVAAHQQNVFDLA 338 (546)
T ss_dssp GGGSTTCCCHHHHCGGGEEEEEESTTTT-TCGGGCEEEEEEESSCHHHHH
T ss_pred hhhcccCcCHHHhCCCCEEEEEeCcccc-CCCCcceEEEEECCHHHHHHH
Confidence 743321 111 125789999999998 556899999999865344433
No 153
>1ajs_A Aspartate aminotransferase; PIG, in the presence of ligand 2-methylaspartate; HET: LLP PLA; 1.60A {Sus scrofa} SCOP: c.67.1.1 PDB: 1ajr_A* 3ii0_A* 1aat_A 2cst_A*
Probab=99.91 E-value=1.1e-23 Score=198.84 Aligned_cols=285 Identities=15% Similarity=0.078 Sum_probs=178.9
Q ss_pred CCccccCC-CCc-hHHHHHHHHHhhcC----CCceEE--eCcHHHHHHHH---HHhcCCC-----CEEEecCCCCCcHHH
Q 016612 45 GPYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FTSGMAALAAV---THLLGTG-----EEIVAGDDLYGGTDR 108 (386)
Q Consensus 45 ~~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~~gt~al~~~---~~~~~~g-----~~Vlv~~~~~~~~~~ 108 (386)
..+.|.+. |.+ +++++.+++....| .++.++ +++|++|+.++ ..++++| |+|++++|+|+++.
T Consensus 66 ~~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~t~gg~~a~~~~~~~~~~~~~g~~~~~d~Vl~~~p~y~~~~- 144 (412)
T 1ajs_A 66 LNHEYLPILGLAEFRTCASRLALGDDSPALQEKRVGGVQSLGGTGALRIGAEFLARWYNGTNNKDTPVYVSSPTWENHN- 144 (412)
T ss_dssp CCCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHSSSSSCCCSCEEEEESCCTHHH-
T ss_pred hccCCCCCCCCHHHHHHHHHHHhcCCCCccCCCcEEEEECCCcHHHHHHHHHHHHHhCcCcCCCCCeEEEcCCCcHHHH-
Confidence 34567655 554 56666666644332 245666 77778998754 3457899 99999999999886
Q ss_pred HHhhhcccCCcE-EEEeCC---C----CHHHHHhhhCC---CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEE
Q 016612 109 LLSRVTPKTGVV-VKRVNT---C----DLDEVASAIGP---WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 109 ~~~~~~~~~g~~-~~~v~~---~----d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~ 174 (386)
..++..|.+ ++.++. + |++++++.+++ +++++++++|+||||.+.+ +++|.++|+++|+++|+
T Consensus 145 ---~~~~~~g~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~ 221 (412)
T 1ajs_A 145 ---GVFTTAGFKDIRSYRYWDTEKRGLDLQGFLSDLENAPEFSIFVLHACAHNPTGTDPTPEQWKQIASVMKRRFLFPFF 221 (412)
T ss_dssp ---HHHHHTTCSCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEE
T ss_pred ---HHHHHcCCceeEEEeeecCCCCccCHHHHHHHHHhCCCCcEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEE
Confidence 444567788 877775 2 78999988763 6788889999999999975 67899999999999999
Q ss_pred eCCCCCCCcc----C---C--C--CCCccEEEeccccccccCCCceEEEEEE--cChh----HHHHHHHhhhhcCCCCCh
Q 016612 175 DNSIMSPVLS----R---P--L--ELGADIVMHSATKFIAGHSDVMAGVLAV--KGER----LAKELYFLQNAEGSGLAP 237 (386)
Q Consensus 175 D~a~~~~~~~----~---~--~--~~~~di~~~S~sK~~~g~~g~~~G~i~~--~~~~----~~~~~~~~~~~~~~~~~~ 237 (386)
||+|...... . . . ..+.++++.|+||.+ |++|+|+|++++ ++++ +.+.+...........+.
T Consensus 222 De~y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (412)
T 1ajs_A 222 DSAYQGFASGNLEKDAWAIRYFVSEGFELFCAQSFSKNF-GLYNERVGNLTVVAKEPDSILRVLSQMQKIVRVTWSNPPA 300 (412)
T ss_dssp EESCTTTTTSCHHHHTHHHHHHHHTTCCEEEEEECTTTS-CCGGGCEEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCS
T ss_pred EcccccccCCcccccchHHHHHhccCCcEEEEEeccccc-CCCCcceEEEEEecCCHHHHHHHHHHHHHHHhcccCCCCh
Confidence 9997643221 0 1 1 123469999999999 567899999998 2344 333233322222223355
Q ss_pred hhHHHHHhcCCcH----------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-Ee
Q 016612 238 FDCWICLRGVKTM----------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LT 306 (386)
Q Consensus 238 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~ 306 (386)
..+.++...++.. ....+.+.++.+.+.+.+++.. .+ .++.+.. + .++++.| .+
T Consensus 301 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~---------~~--~~~~~~~--~--~~~~~~~~~~ 365 (412)
T 1ajs_A 301 QGARIVARTLSDPELFHEWTGNVKTMADRILSMRSELRARLEALK---------TP--GTWNHIT--D--QIGMFSFTGL 365 (412)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---------CS--SCCHHHH--H--CCSSEEECCC
T ss_pred HHHHHHHHHHcCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhC---------CC--CCeeEEc--C--CCceEEEeCC
Confidence 5555554444332 2223333444445555554431 00 0122221 1 2344444 33
Q ss_pred CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhc
Q 016612 307 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 383 (386)
Q Consensus 307 ~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~ 383 (386)
+ .+.+.+.+...|+.+.+ .+|+|++ .++++++++.|++++++
T Consensus 366 ~----~~~~~~~l~~~gv~v~~-------------------------------~~Ris~~~~~~~~i~~~~~~l~~~l~~ 410 (412)
T 1ajs_A 366 N----PKQVEYLINQKHIYLLP-------------------------------SGRINMCGLTTKNLDYVATSIHEAVTK 410 (412)
T ss_dssp C----HHHHHHHHHTTCEECCT-------------------------------TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred C----HHHHHHHHHhCCEEecC-------------------------------CcEEEeeeCCHHHHHHHHHHHHHHHHh
Confidence 3 23344444455775442 1689886 48999999999999876
Q ss_pred C
Q 016612 384 G 384 (386)
Q Consensus 384 ~ 384 (386)
.
T Consensus 411 ~ 411 (412)
T 1ajs_A 411 I 411 (412)
T ss_dssp C
T ss_pred c
Confidence 4
No 154
>1yaa_A Aspartate aminotransferase; HET: PLP; 2.05A {Saccharomyces cerevisiae} SCOP: c.67.1.1
Probab=99.91 E-value=1.8e-23 Score=197.35 Aligned_cols=283 Identities=14% Similarity=0.124 Sum_probs=178.0
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcC----CCceEE--eCcHHHHHHHH---HHhcCCCCEEEecCCCCCcHHHHHhhhc
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FTSGMAALAAV---THLLGTGEEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~~gt~al~~~---~~~~~~g~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
...|.+. |.+ +++++.+++....| .++.++ +++|++|+.++ ...+++||+|++++|+|+++. ..+
T Consensus 66 ~~~y~~~~g~~~lr~~ia~~~~~~~~~~~~~~~i~~~~t~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~~~~~~----~~~ 141 (412)
T 1yaa_A 66 NHEYLGITGLPSLTSNAAKIIFGTQSDALQEDRVISVQSLSGTGALHISAKFFSKFFPDKLVYLSKPTWANHM----AIF 141 (412)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCTTHH----HHH
T ss_pred ccCCCCCCCcHHHHHHHHHHHhcCCCCCCCcceEEEEeccchHhHHHHHHHHHHHhCCCCEEEEeCCCCccHH----HHH
Confidence 3457655 665 67777777765444 345666 66777898754 455689999999999999986 445
Q ss_pred ccCCcEEEEeCC-------CCHHHHHhhhCCC---ceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 115 PKTGVVVKRVNT-------CDLDEVASAIGPW---TKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 115 ~~~g~~~~~v~~-------~d~~~l~~~~~~~---~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
+..|.+++.++. .|++++++.++++ +.++++++|+||||.+.+ +++|.++|+++|+++|+|++|+..
T Consensus 142 ~~~g~~~~~v~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~p~nPtG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 221 (412)
T 1yaa_A 142 ENQGLKTATYPYWANETKSLDLNGFLNAIQKAPEGSIFVLHSCAHNPTGLDPTSEQWVQIVDAIASKNHIALFDTAYQGF 221 (412)
T ss_dssp HTTTCCEEEEECEETTTTEECHHHHHHHHHHSCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHTTCEEEEEESCTTT
T ss_pred HHcCceEEEEeeecCCCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 567888888876 2789999888642 445555999999999975 678999999999999999998643
Q ss_pred Ccc----------CCCC-CC---ccEEEeccccccccCCCceEEEEE--E----cChh----HHHHHHHhhhhcCCCCCh
Q 016612 182 VLS----------RPLE-LG---ADIVMHSATKFIAGHSDVMAGVLA--V----KGER----LAKELYFLQNAEGSGLAP 237 (386)
Q Consensus 182 ~~~----------~~~~-~~---~di~~~S~sK~~~g~~g~~~G~i~--~----~~~~----~~~~~~~~~~~~~~~~~~ 237 (386)
... .... .. .+++++|+||.+ |++|+|+||++ + +++. +.+.+...........+.
T Consensus 222 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~GlriG~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~ 300 (412)
T 1yaa_A 222 ATGDLDKDAYAVRLGVEKLSTVSPVFVCQSFAKNA-GMYGERVGCFHLALTKQAQNKTIKPAVTSQLAKIIRSEVSNPPA 300 (412)
T ss_dssp SSSCHHHHTHHHHHHHHHTTTTCCEEEEEECTTTS-CCGGGCEEEEEEECCSCTTHHHHHHHHHHHHHHHHHTTTSSCCH
T ss_pred cCCcccchhHHHHHHHhcCCCCcceEEEeccCCCC-CCcCCcceEEEEEecCCCCCHHHHHHHHHHHHHHHhhccCCCCh
Confidence 221 1111 12 578999999999 57789999998 6 2344 544444433332333355
Q ss_pred hhHHHHHhcCCcH----------HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEE-Ee
Q 016612 238 FDCWICLRGVKTM----------ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSF-LT 306 (386)
Q Consensus 238 ~~~~~~~~~~~~~----------~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~-~~ 306 (386)
..+.++...++.. ....+.+.++.+.+.+.+++.. +. .++.+.. + .++++.| .+
T Consensus 301 ~~~~a~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~-------~~----~~~~~~~--~--~~~~~~~~~~ 365 (412)
T 1yaa_A 301 YGAKIVAKLLETPELTEQWHKDMVTMSSRITKMRHALRDHLVKLG-------TP----GNWDHIV--N--QCGMFSFTGL 365 (412)
T ss_dssp HHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT-------CS----SCCTHHH--H--CCSSEEECCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC-------CC----CCeeeec--c--CceEEEeeCC
Confidence 5555554444332 2223333344444555554321 00 0122221 1 2344444 33
Q ss_pred CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec---cCChHHHHHHHHHHHhc
Q 016612 307 GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG---IEDVNDLISDLDKALRT 383 (386)
Q Consensus 307 ~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~---~~~~~~~i~~l~~~l~~ 383 (386)
+ . +.+.+.+...|+.+.+ ++|||++ .++++++++.|+++++.
T Consensus 366 ~-~---~~~~~~l~~~gi~v~~-------------------------------~~Ris~~~~~~~~i~~~~~~l~~~~~~ 410 (412)
T 1yaa_A 366 T-P---QMVKRLEETHAVYLVA-------------------------------SGRASIAGLNQGNVEYVAKAIDEVVRF 410 (412)
T ss_dssp C-H---HHHHHHHHHHCEECCT-------------------------------TSEEEGGGCCTTTHHHHHHHHHHHHHH
T ss_pred C-H---HHHHHHHHhCCEEecc-------------------------------CcEEEEccCCHhHHHHHHHHHHHHHHh
Confidence 2 2 2333333445665442 2899986 38889999999988864
No 155
>2pb2_A Acetylornithine/succinyldiaminopimelate aminotran; ARGD, pyridoxal 5'-phosphate, arginine metabolism, lysine biosynthesis, gabaculine; HET: PLP; 1.91A {Salmonella typhimurium} PDB: 2pb0_A*
Probab=99.91 E-value=1.1e-23 Score=199.22 Aligned_cols=285 Identities=15% Similarity=0.158 Sum_probs=184.8
Q ss_pred CCchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-hcC-------CC-CEEEecCCCCCcHHHHHhhhcc--------
Q 016612 53 GNPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG-------TG-EEIVAGDDLYGGTDRLLSRVTP-------- 115 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~~~-------~g-~~Vlv~~~~~~~~~~~~~~~~~-------- 115 (386)
..+.+.++++.+++++|.++.++++||++|+.+++. +.. +| ++|++.+|.|++..........
T Consensus 97 ~~~~~~~l~~~la~~~g~~~v~~~~ggteA~~~al~~~~~~~~~~~~~g~~~vi~~~~~yh~~~~~~~~~~g~~~~~~~~ 176 (420)
T 2pb2_A 97 TNEPALRLGRKLIDATFAERVLFMNSGTEANETAFKLARHYACVRHSPFKTKIIAFHNAFHGRSLFTVSVGGQPKYSDGF 176 (420)
T ss_dssp CCHHHHHHHHHHHHHSSCSEEEEESSHHHHHHHHHHHHHHHHHHHTCTTCCEEEEETTCCCCSSHHHHHHSSCHHHHTTS
T ss_pred CCHHHHHHHHHHHhhCCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCEEEEEeCCcCCcCHHHHHhcCCccccccC
Confidence 346899999999999998888999999999875444 443 67 4899999999775322112111
Q ss_pred -cCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccc----ccHHHHHHHHHHcCCEEEEeCCCCC-CCccC----
Q 016612 116 -KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQI----CDIRKIAEMAHAHGALLLVDNSIMS-PVLSR---- 185 (386)
Q Consensus 116 -~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~----~~l~~i~~la~~~~~~li~D~a~~~-~~~~~---- 185 (386)
.....+..++..|++++++.+++++++|++++++|++|.+ .++++|.++|+++|+++|+||+|.. +....
T Consensus 177 ~p~~~~~~~~~~~d~~~le~~i~~~~~~vi~~p~~~~gG~~~~~~~~l~~l~~l~~~~gi~lI~Dev~~g~~~~g~~~~~ 256 (420)
T 2pb2_A 177 GPKPADIIHVPFNDLHAVKAVMDDHTCAVVVEPIQGEGGVQAATPEFLKGLRDLCDEHQALLVFDEVQCGMGRTGDLFAY 256 (420)
T ss_dssp SSCCSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSHH
T ss_pred CCCCCCeEEecCCCHHHHHHHhccCceEEEEeCCcCCCCeecCCHHHHHHHHHHHHHcCCEEEEEcCCcCcccCCcHHHH
Confidence 1112366777779999999999899999999999987863 3589999999999999999999952 11111
Q ss_pred -CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH--HHHHHHHHHHHH
Q 016612 186 -PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQ 262 (386)
Q Consensus 186 -~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 262 (386)
......|++ |+||+++ +|+++|++++++ ++.+.+...........++..++++...++.+ ....++..++.+
T Consensus 257 ~~~~~~~dii--t~sK~l~--~G~~iG~~~~~~-~l~~~l~~~~~~~t~~~~~~~~aa~~a~L~~~~~~~~~~~~~~~~~ 331 (420)
T 2pb2_A 257 MHYGVTPDIL--TSAKALG--GGFPVSAMLTTQ-EIASAFHVGSHGSTYGGNPLACAVAGAAFDIINTPEVLQGIHTKRQ 331 (420)
T ss_dssp HHHTCCCSEE--EECGGGG--TTSCCEEEEECH-HHHTTCC----CCEECCCHHHHHHHHHHHHHHSSHHHHHHHHHHHH
T ss_pred HhcCCCCCeE--Eeccccc--CCCceEEEEEhH-HHHHhhcCCCcCcccCcCHHHHHHHHHHHHHHHhccHHHHHHHHHH
Confidence 112346876 6799996 368899999975 45443322112222345566665554444322 223344445555
Q ss_pred HHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHH--hHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 263 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA--LSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 263 ~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~--~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
.+.+.+++... ..+.+ ...++.+.++++.+.... ...++.+.+...|+.+.+++
T Consensus 332 ~l~~~L~~~~~----~~~~~----------~~~~~~g~~~~v~~~~~~~~~~~~l~~~l~~~Gi~v~~~~---------- 387 (420)
T 2pb2_A 332 QFVQHLQAIDE----QFDIF----------SDIRGMGLLIGAELKPKYKGRARDFLYAGAEAGVMVLNAG---------- 387 (420)
T ss_dssp HHHHHHHHHHH----HHCCE----------EEEEEETTEEEEEECGGGTTCHHHHHHHHHHTTEECEESS----------
T ss_pred HHHHHHHHHHh----cCCCe----------EEEEecceEEEEEECCCchHHHHHHHHHHHHCCCEEEeCC----------
Confidence 55555543210 00100 011335788888885432 35677777777788665432
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
++++|++++ .++++++++.|++++++
T Consensus 388 -----------------~~~iRl~~~~~~t~eei~~~~~~l~~~l~~ 417 (420)
T 2pb2_A 388 -----------------ADVMRFAPSLVVEEADIHEGMQRFAQAVGK 417 (420)
T ss_dssp -----------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -----------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 345999964 47888888888888765
No 156
>2ord_A Acoat, acetylornithine aminotransferase; TM1785, acetylornithine aminotransferase (EC 2.6.1.11) (ACOA structural genomics; HET: MSE PLP; 1.40A {Thermotoga maritima MSB8} PDB: 2e54_A*
Probab=99.91 E-value=1.1e-23 Score=197.85 Aligned_cols=279 Identities=14% Similarity=0.143 Sum_probs=183.5
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-hcC------C-CCEEEecCCCCCcHHHHHhhhcccCCcE-----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LLG------T-GEEIVAGDDLYGGTDRLLSRVTPKTGVV----- 120 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~~~------~-g~~Vlv~~~~~~~~~~~~~~~~~~~g~~----- 120 (386)
.+.+.++++.+++++|.++.+++++|++|+.+++. +.. + ++.|++.+|.|++.... .+...|.+
T Consensus 81 ~~~~~~l~~~la~~~g~~~v~~~~gg~~a~~~al~~~~~~~~~~~~~~~~vi~~~~~yh~~~~~---~~~~~g~~~~~~~ 157 (397)
T 2ord_A 81 NRPQMELAELLSKNTFGGKVFFANTGTEANEAAIKIARKYGKKKSEKKYRILSAHNSFHGRTLG---SLTATGQPKYQKP 157 (397)
T ss_dssp EHHHHHHHHHHHHTTTSCEEEEESSHHHHHHHHHHHHHHHHHHHCTTCCEEEEEBTCCCCSSHH---HHHHSBCHHHHGG
T ss_pred CHHHHHHHHHHHHhcCCCeEEEeCCHHHHHHHHHHHHHHHhhcCCCCCceEEEEcCCcCCCchh---hhhccCChhhccc
Confidence 35789999999999998888899999999875444 332 5 47899888988664321 12223332
Q ss_pred -------EEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcc-cc---cHHHHHHHHHHcCCEEEEeCCCCCCCc--cCCC
Q 016612 121 -------VKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQ-IC---DIRKIAEMAHAHGALLLVDNSIMSPVL--SRPL 187 (386)
Q Consensus 121 -------~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~-~~---~l~~i~~la~~~~~~li~D~a~~~~~~--~~~~ 187 (386)
+..++..|++++++.+++++++|++++|+||||. +. ++++|.++|+++|+++|+||+|+ +.. ....
T Consensus 158 ~~p~~~~~~~~~~~d~~~l~~~l~~~~~~v~~~~~~nptG~~~~~~~~l~~l~~l~~~~~~~li~De~~~-~~~~~g~~~ 236 (397)
T 2ord_A 158 FEPLVPGFEYFEFNNVEDLRRKMSEDVCAVFLEPIQGESGIVPATKEFLEEARKLCDEYDALLVFDEVQC-GMGRTGKLF 236 (397)
T ss_dssp GCSCCTTEEEECTTCHHHHHHHCCTTEEEEEECSEECTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTT-TTTTTSSSS
T ss_pred cCCCCCCeeEecCCCHHHHHHHhhcCeEEEEEecccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEeccc-CCccCccch
Confidence 6777878999999999989999999999999999 43 68999999999999999999997 221 1111
Q ss_pred -----CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcH--HHHHHHHHHH
Q 016612 188 -----ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDN 260 (386)
Q Consensus 188 -----~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 260 (386)
....|++ |+||+++ +|+|+|+++++++ +. .+...........++..++++..+++.+ ....++..++
T Consensus 237 ~~~~~~~~~d~~--s~sK~~~--~G~r~G~~~~~~~-~~-~l~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~ 310 (397)
T 2ord_A 237 AYQKYGVVPDVL--TTAKGLG--GGVPIGAVIVNER-AN-VLEPGDHGTTFGGNPLACRAGVTVIKELTKEGFLEEVEEK 310 (397)
T ss_dssp HHHHHTCCCSEE--EECGGGG--TTSCCEEEEECST-TC-CCCTTSSCCSSTTCHHHHHHHHHHHHHHTSTTHHHHHHHH
T ss_pred hhhhhCCCCCee--eeccccC--CCcCeEEEEEchH-hc-ccCCCCcCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 1236766 6799996 3678999999865 32 2321112222344555555554443322 1233445555
Q ss_pred HHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 261 AQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 261 ~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
.+.+.+.+++.. .+++. . ...++.+.++++.++......++.+.+...|+.+.+|+
T Consensus 311 ~~~l~~~L~~~~-------~~~~~------~-~~~~~~g~~~~~~~~~~~~~~~l~~~l~~~gi~v~~~~---------- 366 (397)
T 2ord_A 311 GNYLMKKLQEMK-------EEYDV------V-ADVRGMGLMIGIQFREEVSNREVATKCFENKLLVVPAG---------- 366 (397)
T ss_dssp HHHHHHHHHHHH-------HHCTT------E-EEEEEETTEEEEEECTTSCHHHHHHHHHHTTEECEEET----------
T ss_pred HHHHHHHHHHHH-------HhCCc------e-EEEEEEeEEEEEEECChHHHHHHHHHHHHCCCEEccCC----------
Confidence 555665555421 00110 0 01123467888888643335667777766788665432
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
++++|++++ .++++++++.|++++++
T Consensus 367 -----------------~~~iRis~~~~~~~e~i~~~~~~l~~~l~~ 396 (397)
T 2ord_A 367 -----------------NNTIRFLPPLTVEYGEIDLAVETLKKVLQG 396 (397)
T ss_dssp -----------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -----------------CCEEEEECCcCCCHHHHHHHHHHHHHHHhh
Confidence 345999964 47788888888887764
No 157
>3pj0_A LMO0305 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, lyase; HET: LLP MSE; 1.80A {Listeria monocytogenes}
Probab=99.91 E-value=2.8e-23 Score=192.32 Aligned_cols=255 Identities=16% Similarity=0.096 Sum_probs=167.4
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCE--EEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEE--IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~--Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
+...++++++++++|.+..+++++|++++. ++..++.+||. |+++.+.|...... .......|.+++.++..
T Consensus 48 ~~~~~l~~~la~~~~~~~~i~~~~g~~a~~~a~~~~~~~g~~~vvi~~~~~~~~~~~~-~~~~~~~g~~~~~v~~~~~~~ 126 (359)
T 3pj0_A 48 AVIEDFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIHEQ-DGLKELQQITPLLLGTANQLL 126 (359)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHHHHHHTCCEEEECTTCHHHHSST-THHHHHHCCEEEECSCTTSCC
T ss_pred HHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHHHhcCCCcEEEEeccceeeehhc-chHHHhcCceEEecCCcCCCc
Confidence 578899999999999998888899998876 55667778886 55665555332110 01113458888888864
Q ss_pred CHHHHHhhhCCCceEEEEeCCCCCC-ccccc---HHHHHHHHHHcCCEEEEeCCCCCCCc------cCCCCCCccEEEec
Q 016612 128 DLDEVASAIGPWTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMSPVL------SRPLELGADIVMHS 197 (386)
Q Consensus 128 d~~~l~~~~~~~~~~v~~~~~~npt-G~~~~---l~~i~~la~~~~~~li~D~a~~~~~~------~~~~~~~~di~~~S 197 (386)
|+++++++ .+++++|++++|+||+ |.+.+ +++|.++|++||++||+|+++..+.. ......+.|+++.|
T Consensus 127 d~~~l~~~-~~~~~~v~~~~p~n~~~G~~~~~~~l~~l~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~~~~d~~~~s 205 (359)
T 3pj0_A 127 TIDDIKSL-REPVSSVLIELPQREIGGQLPAFEELEKISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVS 205 (359)
T ss_dssp CHHHHHTC-SSCCSEEEEESSBGGGTSBCCCHHHHHHHHHHHHHHTCEEEEEETTCGGGHHHHTCCHHHHHTTCSEEEEE
T ss_pred CHHHHHhc-cCCceEEEEEecccCCCcccCCHHHHHHHHHHHHHcCCEEEEECcchhcchhhhCCCHHHhhccCCEEEEe
Confidence 89999988 7889999999999998 68777 45559999999999999999764321 11112367899999
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCC--ChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcc
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGL--APFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
+||+++++. +|+++.+ +++.+.+.......+... ....+.+...+++....+.++..++.+.+.+.|++.+.+
T Consensus 206 ~sK~~~~~~---gg~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~a~~~~l~~~~~~~~~~~~~~~~l~~~L~~~~g~- 280 (359)
T 3pj0_A 206 FYKGIGGIA---GAILAGN-DDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSCSGV- 280 (359)
T ss_dssp SSSTTCCSS---CEEEEEC-HHHHHHHHHHHHHTTCCCSCCHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHHTSTTE-
T ss_pred ccccCCCcc---eEEEECC-HHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCCc-
Confidence 999997764 3777765 566666655443332221 222222222222222233445566666777777664321
Q ss_pred eEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcCcceeccCCCCc
Q 016612 276 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSV 331 (386)
Q Consensus 276 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~ 331 (386)
.+.. .+..++++++.++.. .....+.+.+...|+.+++|..
T Consensus 281 -------------~~~~--~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~GV~v~~g~~ 323 (359)
T 3pj0_A 281 -------------KTVP--EVPVSNMFHVYFENSADEIGAILTKIQDETGVGISGYLQ 323 (359)
T ss_dssp -------------EEES--SSCSSSEEEEEESSCHHHHHHHHHHHHHHHCEECCSCCE
T ss_pred -------------eeec--cCCcceEEEEEecCccchhHHHHHHHHHhcCcEecCCcc
Confidence 1110 022456777777532 3467788888888999888754
No 158
>3a9z_A Selenocysteine lyase; PLP, cytoplasm, pyridoxal phosphate, transferase; HET: PLP SLP; 1.55A {Rattus norvegicus} PDB: 3a9x_A* 3a9y_A* 3gzd_A* 3gzc_A* 2hdy_A*
Probab=99.91 E-value=2.7e-23 Score=197.29 Aligned_cols=305 Identities=18% Similarity=0.161 Sum_probs=174.3
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHHHH-HHhc--------CCCCEEEecCCCCCcH-------------HHHHh
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALAAV-THLL--------GTGEEIVAGDDLYGGT-------------DRLLS 111 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~~~-~~~~--------~~g~~Vlv~~~~~~~~-------------~~~~~ 111 (386)
...++++++++++|.+ +.+++++|++++.++ ..++ ++||+|+++.|+|+.+ ...+.
T Consensus 62 ~~~~l~~~la~~~g~~~~~v~~~~g~t~a~~~~~~~~~~~~~~~~~~~gd~vl~~~p~y~~~~~i~~~~~~h~s~~~~~~ 141 (432)
T 3a9z_A 62 IINTARASLAKMIGGKPQDIIFTSGGTESNNLVIHSTVRCFHEQQTLQGRTVDQISPEEGTRPHFITCTVEHDSIRLPLE 141 (432)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEESCHHHHHHHHHHHHHHHHHHHHHHC------------CCCEEEEETTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCcCeEEEeCChHHHHHHHHHHHHhhhhhccccCCccccccccccccCCeEEEecCcchhHHHHHH
Confidence 5678999999999986 455666667998754 4443 5898888888877653 23334
Q ss_pred hhcccCCcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcC----------CEEEEe
Q 016612 112 RVTPKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHG----------ALLLVD 175 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~----------~~li~D 175 (386)
..++..|.+++.++.+ |++++++.+++++++|++++|+||||.+.|+++|.++|+++| +++|+|
T Consensus 142 ~~~~~~g~~v~~v~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~l~~~~~~~~~~~~~~~~~livD 221 (432)
T 3a9z_A 142 HLVEDQVAEVTFVPVSKVNGQVEVEDILAAVRPTTCLVTIMLANNETGVIMPISEISRRIKALNQIRAASGLPRVLVHTD 221 (432)
T ss_dssp HHHHTTSCEEEEECCCTTTSSCCHHHHHHTCCTTEEEEECCSBCTTTCBBCCHHHHHHHHHHHHHHHHHHTCCCCEEEEE
T ss_pred HHHHhcCcEEEEEecCcccCCcCHHHHHHhccCCceEEEEECcccCcccccCHHHHHHHHHhcCcccccccCCceEEEEE
Confidence 4555678999988863 789999999989999999999999999999999999999999 999999
Q ss_pred CCCCCCCcc-CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh-------hhhcCCCCChhhHHHHHhcC
Q 016612 176 NSIMSPVLS-RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGV 247 (386)
Q Consensus 176 ~a~~~~~~~-~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~ 247 (386)
++|+.+... +....+.|++++|+||++ |+ ++|+++++++.....+... ........+....+++..++
T Consensus 222 ea~~~~~~~~~~~~~~~d~~~~s~~K~~-g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~aal 297 (432)
T 3a9z_A 222 AAQALGKRRVDVEDLGVDFLTIVGHKFY-GP---RIGALYVRGVGKLTPLYPMLFGGGQERNFRPGTENTPMIAGLGKAA 297 (432)
T ss_dssp CTTTTTTSCCCHHHHCCSEEEEEGGGTT-CC---SCEEEEETTBTTTBCCCCSCCSSCGGGGTSCSCCCHHHHHHHHHHH
T ss_pred chhhhCCcccChhhcCCCEEEEehhHhc-CC---cceEEEEccccccCCcCceeecCCccccccCCCcCHHHHHHHHHHH
Confidence 999876542 112247899999999987 54 3799999865311111111 01111123333333333333
Q ss_pred CcHH----HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcc
Q 016612 248 KTMA----LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYF 322 (386)
Q Consensus 248 ~~~~----~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~ 322 (386)
+.+. ...++..++.+.+.+.|++.+.+ .+...+.. + .....+.+++|.+.+. .....+.+.+.
T Consensus 298 ~~~~~~~~~~~~~~~~~~~~l~~~L~~~~g~-~~~~~~~~--~-------~~~~~~~~~~~~~~~~~~~~~~~~~~l~-- 365 (432)
T 3a9z_A 298 DLVSENCETYEAHMRDIRDYLEERLEAEFGK-RIHLNSRF--P-------GVERLPNTCNFSIQGSQLRGYMVLAQCQ-- 365 (432)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG-GEEESSCC--T-------TCCBCTTEEEEEECSTTCCHHHHHHHCS--
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHhccCC-cEEEeCCC--C-------cccCCCCEEEEEeCCCCCcHHHHHHHhc--
Confidence 3222 22333344444455555442111 11110100 0 0012244677777541 12445666553
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCC----CCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLT----EDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~----~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
++..+.|..... ... ..........|.. +++||||++ .++++++++.|++++++
T Consensus 366 ~i~~~~G~~~~~----~~~---~~~~~~l~~~g~~~~~~~~~iRis~~~~~t~eei~~~~~~l~~~~~~ 427 (432)
T 3a9z_A 366 TLLASVGASCHS----DHE---DRPSPVLLSCGIPVDVARNAVRLSVGRSTTRAEVDLIVQDLKQAVNQ 427 (432)
T ss_dssp SEECBSSCGGGG----GGT---TSCCHHHHHTTCCHHHHTTEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CeEEeccccccC----CCC---CCccHHHHhcCCCccccCceEEEEcCCCCCHHHHHHHHHHHHHHHHH
Confidence 565555543211 000 0000111122332 478999997 37777888888777654
No 159
>1vef_A Acetylornithine/acetyl-lysine aminotransferase; PLP, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: PLP; 1.35A {Thermus thermophilus} SCOP: c.67.1.4 PDB: 1wkg_A* 1wkh_A*
Probab=99.91 E-value=6.7e-24 Score=199.11 Aligned_cols=275 Identities=17% Similarity=0.190 Sum_probs=176.8
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHH-hc--CCCCEEEecCCCCCcHHHHHhhhcccCCc---------
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTDRLLSRVTPKTGV--------- 119 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~-~~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--------- 119 (386)
.+.++++++.++++++. ++.+++++|++|+.+++. +. .+||+|++.++.|++....+ +...|.
T Consensus 86 ~~~~~~l~~~la~~~~~~~~~v~~~~gg~~a~~~al~~~~~~~~~~~vi~~~~~y~~~~~~~---~~~~g~~~~~~~~~p 162 (395)
T 1vef_A 86 TPMRGEFYRTLTAILPPELNRVFPVNSGTEANEAALKFARAHTGRKKFVAAMRGFSGRTMGS---LSVTWEPKYREPFLP 162 (395)
T ss_dssp CHHHHHHHHHHHHTSCTTEEEEEEESSHHHHHHHHHHHHHHHHSCCEEEEETTCCCCSSHHH---HHTCCCHHHHGGGCS
T ss_pred CHHHHHHHHHHHHhcCCCcCEEEEcCcHHHHHHHHHHHHHHHhCCCeEEEEcCCcCCCchhh---hhhcCCcccccccCC
Confidence 45789999999999954 467777888899875443 32 67899999999887543211 112222
Q ss_pred ---EEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCccC-----C
Q 016612 120 ---VVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----P 186 (386)
Q Consensus 120 ---~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~ 186 (386)
++..++..|++++++.+++++++|++++++||||.+.+ +++|.++|+++|++||+|++|+. +.... .
T Consensus 163 ~~~~~~~~~~~d~~~l~~~i~~~~~~v~~~~~~~~tG~~~~~~~~l~~i~~l~~~~~~~li~Dea~~~~~~~g~~~~~~~ 242 (395)
T 1vef_A 163 LVEPVEFIPYNDVEALKRAVDEETAAVILEPVQGEGGVRPATPEFLRAAREITQEKGALLILDEIQTGMGRTGKRFAFEH 242 (395)
T ss_dssp CSSCEEEECTTCHHHHHHHCCTTEEEEEECSEETTTTSEECCHHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHH
T ss_pred CCCCeeEeCCCcHHHHHHHhccCEEEEEEeCccCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCccCCchhHhhh
Confidence 25566667999999999989999999888999999887 99999999999999999999982 11111 1
Q ss_pred CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHH
Q 016612 187 LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKI 264 (386)
Q Consensus 187 ~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l 264 (386)
.....|++ |+||++++ |+++|+++++++ +.+.+...........++..++++..+++.+.. ..++..++.+.+
T Consensus 243 ~~~~~d~~--s~sK~~~~--g~~~G~~~~~~~-~~~~l~~~~~~~~~~~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~l 317 (395)
T 1vef_A 243 FGIVPDIL--TLAKALGG--GVPLGVAVMREE-VARSMPKGGHGTTFGGNPLAMAAGVAAIRYLERTRLWERAAELGPWF 317 (395)
T ss_dssp HTCCCSEE--EECGGGGT--TSSCEEEEEEHH-HHHTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred cCCCCCEE--EEcccccC--CCceEEEEehHH-HHhhhccCCcCCCcCCCHHHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 12346766 78999964 578999998754 544332211122233455555555444443322 223344444555
Q ss_pred HHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC-cceeccCCCCccccccccccccC
Q 016612 265 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK-YFSITVSFGSVKSLISMPCFMSH 343 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~gi~~~~G~~~~~~~~p~~~~~ 343 (386)
.+.+++.. .+ +. ...++.+.++++.++.. ...+.+.+. ..|+.+.++.
T Consensus 318 ~~~l~~~~---------~~------~~-~~~~~~g~~~~~~~~~~--~~~l~~~l~~~~gi~v~~~~------------- 366 (395)
T 1vef_A 318 MEKLRAIP---------SP------KI-REVRGMGLMVGLELKEK--AAPYIARLEKEHRVLALQAG------------- 366 (395)
T ss_dssp HHHHHTSC---------CT------TE-EEEEEETTEEEEEESSC--SHHHHHHHHHHHCEECEESS-------------
T ss_pred HHHHHHhh---------cC------ce-EEEEEEEEEEEEEEcCh--HHHHHHHHHHHCCeEEecCC-------------
Confidence 55554432 00 00 01123467888888542 445666665 6677665431
Q ss_pred CCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHH
Q 016612 344 ASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKAL 381 (386)
Q Consensus 344 ~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l 381 (386)
++++||+++. ++++++++.|++++
T Consensus 367 --------------~~~iRi~~~~~~~~~~i~~~~~~l~~~l 394 (395)
T 1vef_A 367 --------------PTVIRFLPPLVIEKEDLERVVEAVRAVL 394 (395)
T ss_dssp --------------TTEEEECCCTTCCHHHHHHHHHHHHHHH
T ss_pred --------------CCEEEEeCCCCCCHHHHHHHHHHHHHHh
Confidence 4569998764 56666666666654
No 160
>3dxv_A Alpha-amino-epsilon-caprolactam racemase; fold-TYPE1, pyridoxal-5'-phosphate dependent racemase, pyrid phosphate, isomerase; HET: PLP; 2.21A {Achromobacter obae} PDB: 2zuk_A* 3dxw_A*
Probab=99.91 E-value=3.2e-24 Score=204.17 Aligned_cols=319 Identities=13% Similarity=0.082 Sum_probs=196.3
Q ss_pred eeeccCCCCCC---CCCcccceeeeeeeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhc--CC-CceEEeCcHHHHH
Q 016612 12 LLMNFSNEFDP---YGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLD--KA-DRALCFTSGMAAL 83 (386)
Q Consensus 12 ~~~~~~~~~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~--g~-~~~i~~~~gt~al 83 (386)
..++++ ++.+ +|..+|.+.++...... .. ..|+.. + .+.+.++++++++++ +. ++.+++++|++|+
T Consensus 44 ~~lD~~-~~~~~~~lG~~~p~v~~a~~~~~~---~~--~~~~~~~~~~~~~~~l~~~la~~~~~~~~~~v~~~~ggsea~ 117 (439)
T 3dxv_A 44 ELIDLS-GAWGAASLGYGHPAIVAAVSAAAA---NP--AGATILSASNAPAVTLAERLLASFPGEGTHKIWFGHSGSDAN 117 (439)
T ss_dssp EEEESS-TTTTTCTTCBSCHHHHHHHHHHHH---SC--SCSCSSSSEEHHHHHHHHHHHHTTTCTTTEEEEEESSHHHHH
T ss_pred EEEECC-CchhhccCCCCCHHHHHHHHHHHH---hc--cCccccccCCHHHHHHHHHHHHhCCCCCCCEEEEeCCHHHHH
Confidence 456777 4444 77755555543221111 11 223322 3 358999999999998 55 4788888999998
Q ss_pred HHHHHh---cCCCCEEEecCCCCCcHHHHHhhhcccCCc--------------EEEEeCCC----------CHHHHHhhh
Q 016612 84 AAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--------------VVKRVNTC----------DLDEVASAI 136 (386)
Q Consensus 84 ~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--------------~~~~v~~~----------d~~~l~~~~ 136 (386)
..++.. ..+++.|++.++.|++..... ....+. .+..++.. |+++|++++
T Consensus 118 ~~al~~~~~~~~~~~vi~~~~~yhg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~le~~l 194 (439)
T 3dxv_A 118 EAAYRAIVKATGRSGVIAFAGAYHGCTVGS---MAFSGHSVQADAAKADGLILLPYPDPYRPYRNDPTGDAILTLLTEKL 194 (439)
T ss_dssp HHHHHHHHHHHSCCEEEEETTCCCCSSHHH---HCC-------------CEEEECCCCSSSCBTTBTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCEEEEECCCCCCCcHHH---HhhcCCCchhhccccCCCCCCcEEcCCCcccccccHHHHHHHHHHHH
Confidence 744332 346678888888886653221 111111 12334433 589999988
Q ss_pred ----CCCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEecccccc
Q 016612 137 ----GPWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFI 202 (386)
Q Consensus 137 ----~~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~ 202 (386)
.+++++|++++++|++|.+.+ +++|.++|++||++||+||+|+. +... +......|++ |+||.+
T Consensus 195 ~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DE~~~g~g~~g~~~~~~~~~~~~di~--s~sK~~ 272 (439)
T 3dxv_A 195 AAVPAGSIGAAFIEPIQSDGGLIVPPDGFLRKFADICRAHGILVVCDEVKVGLARSGRLHCFEHEGFVPDIL--VLGKGL 272 (439)
T ss_dssp HTSCTTCEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTCTTTTSSSSGGGGTTCCCSEE--EECGGG
T ss_pred HhcCCCCEEEEEEccccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcCchhhHHHhcCCCCCEE--EEcchh
Confidence 567899999999999999988 99999999999999999999962 1111 1122345666 789999
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecC
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYA 280 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 280 (386)
++ |+|+|+++++ +++.+.+......... .++..+.++...++.+. ...++..++.+.+.+.+++... ..+
T Consensus 273 ~~--G~riG~~~~~-~~~~~~~~~~~~~~t~-~~~~~~~aa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~ 344 (439)
T 3dxv_A 273 GG--GLPLSAVIAP-AEILDCASAFAMQTLH-GNPISAAAGLAVLETIDRDDLPAMAERKGRLLRDGLSELAK----RHP 344 (439)
T ss_dssp GT--TSCCEEEEEE-HHHHTSCSSSSCCTTT-TCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH----HCT
T ss_pred cC--CcceEEEEEC-HHHHhhhcCCCcCCCc-ccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHH----hCC
Confidence 63 7899999987 4454433322222233 55555555555443221 1233344444455555443210 001
Q ss_pred CCCCCCchhhhhhccCCCCceEEEEe--------CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 281 GLPEHPGHELHYSQAKGAGSVLSFLT--------GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 281 ~l~~~~~~~i~~~~~~~~~~~~~~~~--------~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
.+ ...++.+.++++.+ ++......+.+.+...|+.+.++..
T Consensus 345 ~~----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~--------------------- 393 (439)
T 3dxv_A 345 LI----------GDIRGRGLACGMELVCDRQSREPARAETAKLIYRAYQLGLVVYYVGM--------------------- 393 (439)
T ss_dssp TE----------EEEEEETTEEEEEEEEETTTTEECHHHHHHHHHHHHHHTEECEEEST---------------------
T ss_pred Ce----------EEEEEEEEEEEEEEecCccccCCCHHHHHHHHHHHHHCCcEEeecCC---------------------
Confidence 00 01134577888876 4455567788888777887665432
Q ss_pred hcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 353 ARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 353 ~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.++++||+++ .++++++++.|++++++.
T Consensus 394 ----~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 425 (439)
T 3dxv_A 394 ----NGNVLEFTPPLTITETDIHKALDLLDRAFSEL 425 (439)
T ss_dssp ----TSCEEEECCCTTCCHHHHHHHHHHHHHHHHTG
T ss_pred ----CCCEEEEECCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2467999864 377888888888888653
No 161
>2q7w_A Aspartate aminotransferase; mechanism-based inhibitor, PLP, sadta, PH dependence; HET: KST PSZ PMP GOL; 1.40A {Escherichia coli} SCOP: c.67.1.1 PDB: 2qa3_A* 2qb2_A* 2qb3_A* 2qbt_A* 3qn6_A* 3pa9_A* 1aaw_A* 1amq_A* 1ams_A* 1arg_A* 1amr_A* 1art_A* 1asa_A* 1asd_A* 1ase_A* 1asl_A* 1asm_A* 1asn_A* 1c9c_A* 1cq6_A* ...
Probab=99.91 E-value=7.8e-23 Score=191.85 Aligned_cols=199 Identities=15% Similarity=0.113 Sum_probs=137.7
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhcC----CCceEE--eCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhc
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLDK----ADRALC--FTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~g----~~~~i~--~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
.+.|.+. |.+ +++++.+++....+ .++.++ +++|++++.++.. .+.+||+|++++|+|+++. ..+
T Consensus 62 ~~~y~~~~g~~~lr~~la~~~~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~Vl~~~p~y~~~~----~~~ 137 (396)
T 2q7w_A 62 TKNYLGIDGIPEFGRCTQELLFGKGSALINDKRARTAQTPGGTGALRVAADFLAKNTSVKRVWVSNPSWPNHK----SVF 137 (396)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHCTTCHHHHTTCEEEEEESHHHHHHHHHHHHHHHHSCCCEEEEEESCCTHHH----HHH
T ss_pred ccCCCCCCCCHHHHHHHHHHHhcCCCCccccccEEEEecccchhhHHHHHHHHHHhCCCCEEEEcCCCchhHH----HHH
Confidence 4457655 654 67777766644322 345555 7777799875543 3579999999999999886 445
Q ss_pred ccCCcEEEEeCC---C----CHHHHHhhhCC---CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCC
Q 016612 115 PKTGVVVKRVNT---C----DLDEVASAIGP---WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSP 181 (386)
Q Consensus 115 ~~~g~~~~~v~~---~----d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~ 181 (386)
+..|.+++.++. + |++++++.+++ +++++++++|+||||.+.+ +++|.++|+++|+++|+||+|+..
T Consensus 138 ~~~g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~v~~~~p~nptG~~~~~~~l~~l~~~~~~~~~~li~De~~~~~ 217 (396)
T 2q7w_A 138 NSAGLEVREYAYYDAENHTLDFDALINSLNEAQAGDVVLFHGCCHNPTGIDPTLEQWQTLAQLSVEKGWLPLFDFAYQGF 217 (396)
T ss_dssp HHTTCEEEEEECEETTTTEECHHHHHHHHTTCCTTCEEEEECSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTS
T ss_pred HHcCCceEEEecccCCCCCcCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecccccc
Confidence 567888888876 3 89999998874 4778888999999999985 678999999999999999998753
Q ss_pred Ccc------CC--C-C-CCccEEEeccccccccCCCceEEEEEE--cCh----hHHHHHHHhhhhcCCCCChhhHHHHHh
Q 016612 182 VLS------RP--L-E-LGADIVMHSATKFIAGHSDVMAGVLAV--KGE----RLAKELYFLQNAEGSGLAPFDCWICLR 245 (386)
Q Consensus 182 ~~~------~~--~-~-~~~di~~~S~sK~~~g~~g~~~G~i~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (386)
... .. . . .+.+++++|+||.+ |++|+|+||+++ +++ .+.+.+...........+...+.++..
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~ 296 (396)
T 2q7w_A 218 ARGLEEDAEGLRAFAAMHKELIVASSYSXNF-GLYNERVGACTLVAADSETVDRAFSQMKAAIRANYSNPPAHGASVVAT 296 (396)
T ss_dssp SSCHHHHTHHHHHHHHHCSCEEEEEECTTTT-TCGGGCCEEEEEECSSHHHHHHHHHHHHHHHHTTTSSCCHHHHHHHHH
T ss_pred cCCccchhHHHHHHHhcCCcEEEEEeccccc-cccccccceEEEEcCCHHHHHHHHHHHHHHHhhccCCCCcHHHHHHHH
Confidence 321 01 1 1 24578999999999 566899999997 334 233333322222222335656655555
Q ss_pred cCCc
Q 016612 246 GVKT 249 (386)
Q Consensus 246 ~~~~ 249 (386)
.++.
T Consensus 297 ~l~~ 300 (396)
T 2q7w_A 297 ILSN 300 (396)
T ss_dssp HHTS
T ss_pred HhcC
Confidence 5443
No 162
>3b8x_A WBDK, pyridoxamine 5-phosphate-dependent dehydrase; aspartate aminotransferase, colitose, perosamine, O-antigen, pyridoxal phosphate,; HET: G4M; 1.70A {Escherichia coli} PDB: 2gms_A* 2gmu_A* 2r0t_A* 3gr9_A*
Probab=99.91 E-value=4.1e-22 Score=186.64 Aligned_cols=301 Identities=17% Similarity=0.155 Sum_probs=196.1
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh-------cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL-------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN 125 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~-------~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~ 125 (386)
.+...++++.+++++|.++.+++++|++++. ++.++ +++||+|+++.++|+++... ++..|.+++.++
T Consensus 33 ~~~~~~l~~~la~~~~~~~~i~~~sGt~a~~~al~~~~~~~~~~~~~g~~Vi~~~~~~~~~~~~----~~~~g~~~~~~~ 108 (390)
T 3b8x_A 33 GEYVKQYETQFAKTFGSKYAVMVSSGSTANLLMIAALFFTKKPRLKKGDEIIVPAVSWSTTYYP----LQQYGLRVKFVD 108 (390)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTSSSSCSCCTTCEEEEESSSCHHHHHH----HHHTTCEEEEEC
T ss_pred ChHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHHhhhhcCCCCcCEEEECCCCcHHHHHH----HHHcCCEEEEEe
Confidence 3578899999999999999999999999887 45556 68899999999999988644 345788888887
Q ss_pred CC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCc--cEEEec
Q 016612 126 TC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGA--DIVMHS 197 (386)
Q Consensus 126 ~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~--di~~~S 197 (386)
.+ |++++++.+++++++|++++ ++|...++++|.++|+++|+++|+|++|+.+...+....+. |+.++|
T Consensus 109 ~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~g~~~~~~~~s 185 (390)
T 3b8x_A 109 IDINTLNIDIESLKEAVTDSTKAILTVN---LLGNPNNFDEINKIIGGRDIILLEDNCESMGATFNNKCAGTFGLMGTFS 185 (390)
T ss_dssp BCTTTCSBCHHHHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHTTSCCEEEEECTTCTTCEETTEETTSSSSEEEEE
T ss_pred cCccccCcCHHHHHHHhCcCCeEEEEEC---CccChhhHHHHHHHHHHcCCEEEEECcCcccCEECCcccccccceEEEE
Confidence 64 89999999998999999874 56777999999999999999999999999776544433444 555544
Q ss_pred c--ccccccCCCceEEEEEEcChhHHHHHHHhhhhc-----------------------------C--CCCChhhHHHHH
Q 016612 198 A--TKFIAGHSDVMAGVLAVKGERLAKELYFLQNAE-----------------------------G--SGLAPFDCWICL 244 (386)
Q Consensus 198 ~--sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~-----------------------------~--~~~~~~~~~~~~ 244 (386)
+ +|.+.++ ++|+++++++.+.+.+....... + ..+++..+++.+
T Consensus 186 ~~~~k~~~~g---~gG~~~~~~~~l~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l 262 (390)
T 3b8x_A 186 SFYSNHIATM---EGGCIVTDDEEIYHILLCIRAHGWTRNLPKKNKVTGVKSDDQFEESFKFVLPGYNVRPLEMSGAIGI 262 (390)
T ss_dssp CCTTSSSCSS---SCEEEEESCHHHHHHHHHHTBTTBSTTSCSEETTTEECCSCTTTSSSCBCSCCCBCCCCHHHHHHHH
T ss_pred ccCCCCCccC---CceEEEeCCHHHHHHHHHHHhcCCCccccccccccccccccccccccceeccccccCcCHHHHHHHH
Confidence 2 4544332 36999988766655554433211 1 114556666555
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhcCcc
Q 016612 245 RGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYF 322 (386)
Q Consensus 245 ~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~ 322 (386)
..++.+....++..++.+.+.+.|++.+.+ ..... ........+.+.++. ....+.+.+.|...
T Consensus 263 ~~l~~l~~~~~~~~~~~~~l~~~L~~~~~~---~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~~l~~~L~~~ 328 (390)
T 3b8x_A 263 EQLKKLPRFISVRRKNAEYFLDKFKDHPYL---DVQQE-----------TGESSWFGFSFIIKKDSGVIRKQLVENLNSA 328 (390)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCSSE---EECCC-----------CSBCCCCEEEEEECTTSCCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCc---ccCCC-----------CCCcccEEEEEEecCcCcccHHHHHHHHHHC
Confidence 555555555556666666676666654321 11110 001112235555542 12356677777777
Q ss_pred eeccCCCCccccccc-cccc----c-CCCCCHHHHHhcCCCCCeEEEEeccCChHHHHHHHHHHHh
Q 016612 323 SITVSFGSVKSLISM-PCFM----S-HASIPVEVRQARGLTEDLVRISVGIEDVNDLISDLDKALR 382 (386)
Q Consensus 323 gi~~~~G~~~~~~~~-p~~~----~-~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~i~~l~~~l~ 382 (386)
|+.++.....+.+.. |... . ...++..... ..+.+|++++...+++.++.+.++|+
T Consensus 329 gI~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~l~l~~~~~~t~~di~~i~~~l~ 390 (390)
T 3b8x_A 329 GIECRPIVTGNFLKNTDVLKYFDYTVHNNVDNAEYL----DKNGLFVGNHQIELFDEIDYLREVLK 390 (390)
T ss_dssp TBCCBCSTTSSGGGCHHHHTTCEEEESSCCHHHHHH----HHHEEEEECCSSCCHHHHHHHHHHTC
T ss_pred CCCeeeecCCchhhcchhhhcCCCCCcCCChHHHHH----hcCEEEeeCCCCCCHHHHHHHHHhhC
Confidence 887665221122222 3211 0 1222222111 12459999999888888888887763
No 163
>1v72_A Aldolase; PLP-dependent enzyme, lyase; HET: PLP; 2.05A {Pseudomonas putida} SCOP: c.67.1.1
Probab=99.90 E-value=1e-21 Score=181.39 Aligned_cols=276 Identities=16% Similarity=0.146 Sum_probs=176.7
Q ss_pred CchHHHHHHHHHhhcCCCc-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCC--
Q 016612 54 NPTRDALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTC-- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~-- 127 (386)
.+.++++++++++++|.+. .+++++|++++. ++..++++||+|++++|.|+++... ..+... |.+++.++.+
T Consensus 42 ~~~~~~l~~~la~~~g~~~~v~~~~~gt~a~~~al~~~~~~gd~vi~~~~~~~~~~~~--~~~~~~~~g~~~~~v~~~~~ 119 (356)
T 1v72_A 42 DELTAQVKRKFCEIFERDVEVFLVPTGTAANALCLSAMTPPWGNIYCHPASHINNDEC--GAPEFFSNGAKLMTVDGPAA 119 (356)
T ss_dssp SHHHHHHHHHHHHHHTSCCEEEEESCHHHHHHHHHHTSCCTTEEEEECTTSHHHHSST--THHHHHTTSCEEEECCCGGG
T ss_pred chHHHHHHHHHHHHhCCCCcEEEeCCccHHHHHHHHHhcCCCCEEEEcCccchhhhhc--hHHHHHhCCcEEEEecCCCC
Confidence 3578999999999999654 577788899986 4555778999999999988765321 003334 8889888864
Q ss_pred --CHHHHHh-hhCC-------CceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEEEeCCCCCC------CccCCC-
Q 016612 128 --DLDEVAS-AIGP-------WTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLLVDNSIMSP------VLSRPL- 187 (386)
Q Consensus 128 --d~~~l~~-~~~~-------~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li~D~a~~~~------~~~~~~- 187 (386)
|++++++ .+++ ++++|++++|+| ||.++ ++++|.++|++||+++|+|++|+.+ ......
T Consensus 120 ~~d~~~l~~~~i~~~~~~~~~~~~~v~~~~~~~-tG~~~~~~~l~~i~~~~~~~~~~li~D~a~~~~~~~~~~~~~~~~~ 198 (356)
T 1v72_A 120 KLDIVRLRERTREKVGDVHTTQPACVSITQATE-VGSIYTLDEIEAIGDVCKSSSLGLHMDGSRFANALVSLGCSPAEMT 198 (356)
T ss_dssp CCCHHHHHHHTTSSTTCTTSCEEEEEEEESSCT-TSCCCCHHHHHHHHHHHHHTTCEEEEEETTHHHHHHHHTCCTTTTT
T ss_pred eEcHHHHHHHhhhcchhhccCCceEEEEEcCCC-CCccCCHHHHHHHHHHHHHcCCeEEEEchhhHhHhccCCCCHHHhh
Confidence 8999999 8875 689999999987 99965 5899999999999999999998632 111111
Q ss_pred -CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCC--hhhHHHHHhcCCc--HHHHHHHHHHHHH
Q 016612 188 -ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLA--PFDCWICLRGVKT--MALRVEKQQDNAQ 262 (386)
Q Consensus 188 -~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~ 262 (386)
..+.|+++.|+||+ ++|.| +|+++++ +++.+.+.......+.... ..........++. +....++..++.+
T Consensus 199 ~~~~~d~~~~s~sK~-g~~~G--~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 274 (356)
T 1v72_A 199 WKAGVDALSFGATKN-GVLAA--EAIVLFN-TSLATEMSYRRKRAGHLSSKMRFLSAQIDAYLTDDLWLRNARKANAAAQ 274 (356)
T ss_dssp GGGTCCEEEECCGGG-TCSSC--EEEEESS-GGGHHHHHHHHHHTTCCCSSTHHHHHHHHHHTSTTHHHHHHHHHHHHHH
T ss_pred hhhcCCEEEEecccC-CCcCc--cEEEEEC-HHHHhhHHHHhhccCchhhhHHHHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 13678999999999 45443 4688775 5565555444332222111 1222112223322 2223344455556
Q ss_pred HHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccccc
Q 016612 263 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 342 (386)
Q Consensus 263 ~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~ 342 (386)
.+.+.|++.+ +..+.. +..++++++.++. .+.+.+...|+.+.+|..
T Consensus 275 ~l~~~L~~~~--------------g~~~~~---~~~~~~~~~~~~~-----~~~~~l~~~gi~v~~g~~----------- 321 (356)
T 1v72_A 275 RLAQGLEGLG--------------GVEVLG---GTEANILFCRLDS-----AMIDALLKAGFGFYHDRW----------- 321 (356)
T ss_dssp HHHHHHTTCT--------------TEEEES---CCCSSEEEEEECH-----HHHHHHHHTTCBCBCSSS-----------
T ss_pred HHHHHHhhCC--------------CcEEcc---CCCccEEEEEcCH-----HHHHHHHhcCeEEecccc-----------
Confidence 6666665432 221111 1235677777652 455555556777665541
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 343 HASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
+ ++++|++++. ++++++++.|++++++
T Consensus 322 ------------~--~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 352 (356)
T 1v72_A 322 ------------G--PNVVRFVTSFATTAEDVDHLLNQVRLAADR 352 (356)
T ss_dssp ------------S--TTEEEEECCTTCCHHHHHHHHHHHHHTC--
T ss_pred ------------C--CCeEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 1 3569999864 5666777777766654
No 164
>3bb8_A CDP-4-keto-6-deoxy-D-glucose-3-dehydrase; aspartate aminotransferase fold, oxidoreductase; HET: PLP; 2.35A {Yersinia pseudotuberculosis} PDB: 3bcx_A
Probab=99.90 E-value=2.7e-22 Score=190.70 Aligned_cols=161 Identities=19% Similarity=0.123 Sum_probs=129.0
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHh---------cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHL---------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~---------~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
+...++++.+++++|.++.+++++|++++. ++.++ +++||+|+++.++|+++...+ +..|.+++.+
T Consensus 62 ~~~~~l~~~la~~~g~~~~i~~~sGt~a~~~al~~l~~~~~~~~~~~~gd~Vi~~~~~~~~~~~~~----~~~g~~~~~v 137 (437)
T 3bb8_A 62 RFNDAFEKKLGEYLGVPYVLTTTSGSSANLLALTALTSPKLGVRALKPGDEVITVAAGFPTTVNPT----IQNGLIPVFV 137 (437)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEESCHHHHHHHHHHHTTCGGGGGGSCCTTCEEEECSSSCHHHHHHH----HHTTCEEEEC
T ss_pred hHHHHHHHHHHHHHCCCcEEEeCCHHHHHHHHHHHhhhcccccccCCCcCEEEECCCCcHHHHHHH----HHcCCEEEEE
Confidence 578899999999999999999999999887 44555 789999999999999986443 4578898888
Q ss_pred CCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCC--ccEEEe
Q 016612 125 NTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELG--ADIVMH 196 (386)
Q Consensus 125 ~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~--~di~~~ 196 (386)
+.+ |++++++++++++++|++++ ++|...++++|.++|+++|+++|+|++|+.+...+....+ .|+++.
T Consensus 138 ~~~~~~~~~d~~~l~~~i~~~~~~v~~~~---~~g~~~~~~~i~~l~~~~~~~li~D~a~~~g~~~~~~~~~~~~d~~~~ 214 (437)
T 3bb8_A 138 DVDIPTYNVNASLIEAAVSDKTKAIMIAH---TLGNLFDLAEVRRVADKYNLWLIEDCCDALGSTYDGKMAGTFGDIGTV 214 (437)
T ss_dssp CEETTTTEECGGGHHHHCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHHTCEEEEECTTCTTCEETTEETTSSSSEEEE
T ss_pred eccCccCCcCHHHHHHhcCCCCeEEEEeC---CCCChhcHHHHHHHHHHcCCEEEEECccccCceECCeecccccCEEEE
Confidence 753 79999999998999999875 3456689999999999999999999999877654333334 789888
Q ss_pred ccccccccCCCceEEEEEEcChhHHHH
Q 016612 197 SATKFIAGHSDVMAGVLAVKGERLAKE 223 (386)
Q Consensus 197 S~sK~~~g~~g~~~G~i~~~~~~~~~~ 223 (386)
|++|...-+ |.++|+++++++.+.+.
T Consensus 215 s~~~~k~l~-~g~gg~~~~~~~~~~~~ 240 (437)
T 3bb8_A 215 SFYPAKHIT-MGEGGAVFTQSAELKSI 240 (437)
T ss_dssp ECSTTSSSC-CSSCEEEEESCHHHHHH
T ss_pred ECcCCcCCC-CCCeEEEEeCCHHHHHH
Confidence 886655433 34789999886655544
No 165
>1svv_A Threonine aldolase; structural genomics, structural genomics of pathogenic proto SGPP, protein structure initiative, PSI; 2.10A {Leishmania major} SCOP: c.67.1.1
Probab=99.90 E-value=6.2e-23 Score=189.75 Aligned_cols=309 Identities=14% Similarity=0.095 Sum_probs=187.4
Q ss_pred ceeeccCCCCCCCCCcccceeeeeeeecCCCCCCCCccccCC-CC-chHHHHHHHHHhhcCCC--ceEEeCcHHHHHH-H
Q 016612 11 TLLMNFSNEFDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GN-PTRDALESLLAKLDKAD--RALCFTSGMAALA-A 85 (386)
Q Consensus 11 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~-~~~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~ 85 (386)
+..++++ .++.|..++.+.++..... . .|... |. ++++++++++++++|.+ +.+++++|++++. +
T Consensus 13 p~~i~l~--~~~~~~~~~~v~~a~~~~~---~-----~~~~~~g~~~~~~~~~~~l~~~~g~~~~~v~~~~g~t~a~~~~ 82 (359)
T 1svv_A 13 PKPYSFV--NDYSVGMHPKILDLMARDN---M-----TQHAGYGQDSHCAKAARLIGELLERPDADVHFISGGTQTNLIA 82 (359)
T ss_dssp --CEECS--CSCSSCCCHHHHHHHHHHT---T-----CCCCSTTCSHHHHHHHHHHHHHHTCTTSEEEEESCHHHHHHHH
T ss_pred CeeEEec--CCCcCCCCHHHHHHHHHHH---h-----hccccccccHHHHHHHHHHHHHhCCCCccEEEeCCchHHHHHH
Confidence 3456666 3555544444444321111 1 24333 44 48999999999999876 4666777889987 4
Q ss_pred HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----CHHHHHhhhCCC-------ceEEEEeCCCCCCcc
Q 016612 86 VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW-------TKLVWVESPTNPRQQ 154 (386)
Q Consensus 86 ~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~~~~~-------~~~v~~~~~~nptG~ 154 (386)
+..++++||+|++++|+|+++... ..++..|.+++.++.+ |++++++.++++ +++|++++| ||||.
T Consensus 83 ~~~~~~~gd~vl~~~~~~~~~~~~--~~~~~~g~~~~~v~~~~~~~d~~~l~~~l~~~~~~~~~~~~~v~~~~~-~ptG~ 159 (359)
T 1svv_A 83 CSLALRPWEAVIATQLGHISTHET--GAIEATGHKVVTAPCPDGKLRVADIESALHENRSEHMVIPKLVYISNT-TEVGT 159 (359)
T ss_dssp HHHHCCTTEEEEEETTSHHHHSST--THHHHTTCCEEEECCTTSCCCHHHHHHHHHHSCSTTSCEEEEEEEESS-CTTSC
T ss_pred HHHHhCCCCEEEEcccchHHHHHH--HHHhcCCCeeEEEeCCCCeecHHHHHHHHHHHHhccCCCceEEEEEcC-CCCce
Confidence 555788999999999999887431 1245678889888865 589999988754 899999999 79999
Q ss_pred ccc---HHHHHHHHHHcCCEEEEeCCC---CCCCccCCCC-----CCccEEEeccccccccCCCceEEEEEEcChhHHHH
Q 016612 155 ICD---IRKIAEMAHAHGALLLVDNSI---MSPVLSRPLE-----LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE 223 (386)
Q Consensus 155 ~~~---l~~i~~la~~~~~~li~D~a~---~~~~~~~~~~-----~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~ 223 (386)
+.| +++|.++|+++|+++|+|++| +.+....... ...|+++.|++|+. ++.| .|+++++++ +.+.
T Consensus 160 ~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~~K~g-~~~~--~g~l~~~~~-~~~~ 235 (359)
T 1svv_A 160 QYTKQELEDISASCKEHGLYLFLDGARLASALSSPVNDLTLADIARLTDMFYIGATKAG-GMFG--EALIILNDA-LKPN 235 (359)
T ss_dssp CCCHHHHHHHHHHHHHHTCEEEEECTTHHHHHTSTTCCCCHHHHHHHCSEEEEECTTTT-CSSC--EEEEECSGG-GCTT
T ss_pred ecCHHHHHHHHHHHHHhCCEEEEEccchhhhhcCCCcchhhhhhhhcCCEEEEecccCC-CCCc--eEEEEEccc-HHHH
Confidence 998 899999999999999999998 3333221111 35789999999984 5544 688888644 4333
Q ss_pred HHHhhhhcCC--CCChhhHHHHHhcCCc--HHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCC
Q 016612 224 LYFLQNAEGS--GLAPFDCWICLRGVKT--MALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAG 299 (386)
Q Consensus 224 ~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~ 299 (386)
+.......+. .............+.. +....++..++.+.+.+.+ +.+ ++. +.. +..+
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~~L-~~~--------~~~------~~~---~~~~ 297 (359)
T 1svv_A 236 ARHLIKQRGALMAKGWLLGIQFEVLMKDNLFFELGAHSNKMAAILKAGL-EAC--------GIR------LAW---PSAS 297 (359)
T ss_dssp HHHHHHHTTCCCTTTHHHHHHHHHHTSTTHHHHHHHHHHHHHHHHHHHH-HHT--------TCC------BSS---CCSS
T ss_pred HHHHHhcCCcccccchhhHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHh-ccC--------CeE------Ecc---CCcc
Confidence 3332211121 1111111111222322 2334455555666666666 322 111 110 1124
Q ss_pred ceEEEEeCCHHhHHHHHhhcCcc-eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHH
Q 016612 300 SVLSFLTGSLALSKHVVETTKYF-SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLI 374 (386)
Q Consensus 300 ~~~~~~~~~~~~~~~l~~~l~~~-gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i 374 (386)
.++++.++ .++.+.+... |+.+ ++.. + ..++++|++++. +++++++
T Consensus 298 ~~~~~~~~-----~~~~~~l~~~~gi~v-~~~~------~-----------------~~~~~iRi~~~~~~~~~~i~~~~ 348 (359)
T 1svv_A 298 NQLFPILE-----NTMIAELNNDFDMYT-VEPL------K-----------------DGTCIMRLCTSWATEEKECHRFV 348 (359)
T ss_dssp SEECBEEE-----HHHHHHHTTTEECEE-EEEE------T-----------------TTEEEEEEECCTTCCHHHHHHHH
T ss_pred ceEEEEcC-----HHHHHHHHHhcCEEE-Eecc------c-----------------CCCceEEEEccCcCCHHHHHHHH
Confidence 45555554 2455666555 7755 2110 0 124579999864 5666666
Q ss_pred HHHHHHHhc
Q 016612 375 SDLDKALRT 383 (386)
Q Consensus 375 ~~l~~~l~~ 383 (386)
+.|++++++
T Consensus 349 ~~l~~~~~~ 357 (359)
T 1svv_A 349 EVLKRLVAS 357 (359)
T ss_dssp HHHHHC---
T ss_pred HHHHHHHhc
Confidence 666666654
No 166
>2hox_A ALLIIN lyase 1; cysteine sulphoxide lyase, ALLIINASE; HET: NAG FUC BMA P1T; 1.40A {Allium sativum} SCOP: c.67.1.1 PDB: 2hor_A* 1lk9_A*
Probab=99.90 E-value=2.7e-24 Score=203.52 Aligned_cols=284 Identities=18% Similarity=0.165 Sum_probs=176.3
Q ss_pred hHHHHHHHHHhhcC--C-CceEEeC-cHHHHHHH-HHHh--------cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEE
Q 016612 56 TRDALESLLAKLDK--A-DRALCFT-SGMAALAA-VTHL--------LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK 122 (386)
Q Consensus 56 ~~~~l~~~l~~~~g--~-~~~i~~~-~gt~al~~-~~~~--------~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~ 122 (386)
+++++.+++....+ . ++.|+++ ++++++.+ +.++ +++||+|+++.|.|+++... ++..|.+++
T Consensus 105 lr~aia~~~~~~~~~~~~~~~iv~t~G~~~al~~~~~~l~~~~~~~~~~~Gd~Vlv~~P~y~~~~~~----~~~~g~~~~ 180 (427)
T 2hox_A 105 LEKTIKELHEVVGNAAAKDRYIVFGVGVTQLIHGLVISLSPNMTATPDAPESKVVAHAPFYPVFREQ----TKYFDKKGY 180 (427)
T ss_dssp HHHHHHHHHHHHTCBCCTTCEEEEESHHHHHHHHHHHHHSCCTTTCTTSCCEEEEECSSCCHHHHHH----HHHSCBTTE
T ss_pred HHHHHHHHHHHhCCcCCCCCEEEEeCCHHHHHHHHHHHHhhccccccCCCCCEEEEeCCCcccHHHH----HHHcCCeee
Confidence 56666666654332 2 2345454 45689874 4557 78999999999999888643 445566655
Q ss_pred EeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccccc
Q 016612 123 RVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKF 201 (386)
Q Consensus 123 ~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~ 201 (386)
.+. .|+++|++.+++++++|++++|+||||.+.+ + + ++ ++..+.|+.+..+... .....+.+++++|+||.
T Consensus 181 ~~~-~d~~~l~~~~~~~~k~v~l~~p~NPtG~~~~-~-~---l~--~~~~i~d~~~~~~~~s~~~~~~~~~i~~~S~SK~ 252 (427)
T 2hox_A 181 VWA-GNAANYVNVSNPEQYIEMVTSPNNPEGLLRH-A-V---IK--GCKSIYDMVYYWPHYTPIKYKADEDILLFTMSKF 252 (427)
T ss_dssp EEE-EEGGGGTTCSCGGGEEEEEESSCTTTCCCCC-C-S---ST--TCEEEEECTTCSTTTSCCCSCBCCSEEEEEHHHH
T ss_pred eec-CCHHHHHHhhcCCceEEEEcCCCCCcccccH-H-H---Hc--CCCEEEeecccCCCCCccccCCCceEEEEeChhc
Confidence 444 3788898888888999999999999999999 4 2 23 5678999887532211 11124689999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc---------------HHHHHHHHHHHHHHHHH
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT---------------MALRVEKQQDNAQKIAE 266 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~l~~ 266 (386)
+ |++|+|+||++++++.+.+.+.........+.+...+.++...+.. +....+.+.++.+.+.+
T Consensus 253 ~-g~~G~RiG~~~~~~~~l~~~l~~~~~~~~~~~~~~~q~a~~~~L~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~ 331 (427)
T 2hox_A 253 T-GHSGSRFGWALIKDESVYNNLLNYMTKNTEGTPRETQLRSLKVLKEVVAMVKTQKGTMRDLNTFGFKKLRERWVNITA 331 (427)
T ss_dssp T-SCGGGCCEEEEECCHHHHHHHHHHHHHHTSSCCHHHHHHHHHHHHHHHHHHHHHTTSTTSHHHHHHHHHHHHHHHHHH
T ss_pred C-CCCCceEEEEEECCHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhhcchhhhccccchhHHHHHHHHHHHHHHHHHHHH
Confidence 8 5678999999996667777776666554455666655554333321 12233455556666666
Q ss_pred HHhhCCCcceEecCCCC--C-CCchhhhhhccCCCCceEEEEeCC--HHhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 267 FLASHPRVKKVNYAGLP--E-HPGHELHYSQAKGAGSVLSFLTGS--LALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~--~-~~~~~i~~~~~~~~~~~~~~~~~~--~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
.|++.+.+ ....+. . ..+..+ ..+ ..+.++++.++. .+...++++ ..|+.+++|..+.
T Consensus 332 ~L~~~~g~---~~~~~~~~~~~~~~~~--~~p-~~g~f~~~~~~~~~~~~~~~ll~---~~gI~v~pg~~f~-------- 394 (427)
T 2hox_A 332 LLDQSDRF---SYQELPQSEYCNYFRR--MRP-PSPSYAWVKCEWEEDKDCYQTFQ---NGRINTQNGVGFE-------- 394 (427)
T ss_dssp HHTTSSSE---ECCCCCSCEEETTTTE--EEC-CCCSEEEEEECSGGGCSHHHHHH---HTTEECEEGGGGT--------
T ss_pred HHHhCcCc---cccccccccccccccc--cCC-CCceEEEEECCCcHHHHHHHHHH---HCCEEEcCCCccC--------
Confidence 66654321 110000 0 000111 111 235667777753 223333332 4577777766421
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEecc--CChHHHHHHHHHHHhc
Q 016612 342 SHASIPVEVRQARGLTEDLVRISVGI--EDVNDLISDLDKALRT 383 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~~~--~~~~~~i~~l~~~l~~ 383 (386)
..+++||||++. +++++.++.|++++++
T Consensus 395 --------------~~~~~~Ris~~~~~e~l~~~l~~l~~~~~~ 424 (427)
T 2hox_A 395 --------------ASSRYVRLSLIKTQDDFDQLMYYLKDMVKA 424 (427)
T ss_dssp --------------SCTTEEEEECSSCHHHHHHHHHHHHHHHTC
T ss_pred --------------CCCCEEEEEecCCHHHHHHHHHHHHHHHhh
Confidence 135789999974 5567777777777754
No 167
>2po3_A 4-dehydrase; external aldimine, PLP, aminotransferase, TDP-sugar; HET: T4K; 2.10A {Streptomyces venezuelae}
Probab=99.90 E-value=4.6e-22 Score=188.39 Aligned_cols=164 Identities=21% Similarity=0.222 Sum_probs=131.6
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------C
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------D 128 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d 128 (386)
+...++++.+++++|.++.+++++|++++.+++..+.+||+|++++|+|+++.. .++..|.+++.++.+ |
T Consensus 52 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~l~~l~~gd~Vlv~~~~~~~~~~----~~~~~G~~~~~v~~~~~~~~~d 127 (424)
T 2po3_A 52 PLVREFEERVAGLAGVRHAVATCNATAGLQLLAHAAGLTGEVIMPSMTFAATPH----ALRWIGLTPVFADIDPDTGNLD 127 (424)
T ss_dssp HHHHHHHHHHHHHHTSSEEEEESCHHHHHHHHHHHHTCCSEEEEESSSCTHHHH----HHHHTTCEEEEECBCTTTSSBC
T ss_pred HHHHHHHHHHHHHhCCCeEEEeCCHHHHHHHHHHHcCCCCEEEECCCccHHHHH----HHHHcCCEEEEEecCCCcCCcC
Confidence 567889999999999988888899999998665555689999999999998864 445678899888754 7
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC--CCCCCccEEEeccc--ccccc
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR--PLELGADIVMHSAT--KFIAG 204 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~--~~~~~~di~~~S~s--K~~~g 204 (386)
++++++.+++++++|++++ |+|...++++|.++|+++|+++|+|++|+.+...+ ......|++++|+| |++++
T Consensus 128 ~~~l~~~i~~~~~~v~~~~---~tG~~~~l~~i~~la~~~~~~li~Dea~~~g~~~~~~~~~~~~di~~~S~sk~K~l~~ 204 (424)
T 2po3_A 128 PDQVAAAVTPRTSAVVGVH---LWGRPCAADQLRKVADEHGLRLYFDAAHALGCAVDGRPAGSLGDAEVFSFHATKAVNA 204 (424)
T ss_dssp HHHHGGGCCTTEEEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTSSSCC
T ss_pred HHHHHHhhCcCCcEEEEEC---CCCCcCCHHHHHHHHHHcCCEEEEECccccCCeECCeecccccCEEEEeCCCCCCccC
Confidence 8999999988899999754 79999999999999999999999999998654321 12222589999999 77644
Q ss_pred CCCceEEEEEEcChhHHHHHHHhh
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQ 228 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~ 228 (386)
.++|+++++++++.+.+....
T Consensus 205 ---~~~G~~v~~~~~l~~~l~~~~ 225 (424)
T 2po3_A 205 ---FEGGAVVTDDADLAARIRALH 225 (424)
T ss_dssp ---SSCEEEEESCHHHHHHHHHHH
T ss_pred ---CCCeEEEeCCHHHHHHHHHHH
Confidence 478999987566666555443
No 168
>2oat_A Ornithine aminotransferase; 5-fluoromethylornithine, PLP-dependent ENZ pyridoxal phosphate; HET: PFM; 1.95A {Homo sapiens} SCOP: c.67.1.4 PDB: 1oat_A* 2byj_A* 2byl_A* 1gbn_A* 2can_A*
Probab=99.90 E-value=1.4e-22 Score=192.58 Aligned_cols=282 Identities=13% Similarity=0.124 Sum_probs=182.6
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHH-hc---------CCC-CEEEecCCCCCcHHHHHhhhcc-------
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTH-LL---------GTG-EEIVAGDDLYGGTDRLLSRVTP------- 115 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~-~~---------~~g-~~Vlv~~~~~~~~~~~~~~~~~------- 115 (386)
.+.+.++++.+++++|.++.++++||++|+.+++. +. .+| |+|++.++.|++..........
T Consensus 117 ~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~~~~~~~~~~g~~~g~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~ 196 (439)
T 2oat_A 117 NNVLGEYEEYITKLFNYHKVLPMNTGVEAGETACKLARKWGYTVKGIQKYKAKIVFAAGNFWGRTLSAISSSTDPTSYDG 196 (439)
T ss_dssp ESSHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTTCCCTTCCEEEEETTCCCCSSHHHHTTCCCHHHHTT
T ss_pred CHHHHHHHHHHHHhcCCCEEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEcCCCCCCCHhHhhcCCChhcccC
Confidence 35789999999999998888899999999874433 32 356 8999999998765322112111
Q ss_pred --cCCcEEEEeCCCCHHHHHhhh-CCCceEEEEeCCCCCCcccc----cHHHHHHHHHHcCCEEEEeCCCCC-CCcc---
Q 016612 116 --KTGVVVKRVNTCDLDEVASAI-GPWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS-PVLS--- 184 (386)
Q Consensus 116 --~~g~~~~~v~~~d~~~l~~~~-~~~~~~v~~~~~~nptG~~~----~l~~i~~la~~~~~~li~D~a~~~-~~~~--- 184 (386)
....++..++..|++++++.+ ++++++|++++.++++|.+. ++++|.++|++||+++|+||+|.. +...
T Consensus 197 ~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~g~~g~~~ 276 (439)
T 2oat_A 197 FGPFMPGFDIIPYNDLPALERALQDPNVAAFMVEPIQGEAGVVVPDPGYLMGVRELCTRHQVLFIADEIQTGLARTGRWL 276 (439)
T ss_dssp SCSCCTTEEEECSSCHHHHHHHTTSTTEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS
T ss_pred CCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCCccCCcch
Confidence 011456777878999999999 47888999888888899876 699999999999999999999952 1111
Q ss_pred --CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHH
Q 016612 185 --RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQD 259 (386)
Q Consensus 185 --~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 259 (386)
+......|++ |+||++++ | +++|++++++ ++.+.+...........++..++++...++.+.. ..++..+
T Consensus 277 ~~~~~~~~~Di~--t~sK~l~~--G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 351 (439)
T 2oat_A 277 AVDYENVRPDIV--LLGKALSG--GLYPVSAVLCDD-DIMLTIKPGEHGSTYGGNPLGCRVAIAALEVLEEENLAENADK 351 (439)
T ss_dssp GGGGGTCCCSEE--EECGGGGT--TSSCCEEEEECH-HHHTTSCTTSSCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hHHHhCCCCcEE--EecccccC--CCCCeEEEEECH-HHHhccCCCCcccCCCcCHHHHHHHHHHHHHHhhhhHHHHHHH
Confidence 1122346776 78999964 6 7899999974 4544333221222234556666655555443322 1223333
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHhhcCcceeccCCCCccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVETTKYFSITVSFGSVKSLISM 337 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~~l~~~gi~~~~G~~~~~~~~ 337 (386)
+.+.+.+.+++. ++ + +. ...++.+.++++.+.+. ....++.+.+...|+.+.++
T Consensus 352 ~~~~l~~~L~~l---------~~---~---~~-~~~~~~g~~~~v~l~~~~~~~~~~l~~~l~~~Gv~v~~~-------- 407 (439)
T 2oat_A 352 LGIILRNELMKL---------PS---D---VV-TAVRGKGLLNAIVIKETKDWDAWKVCLRLRDNGLLAKPT-------- 407 (439)
T ss_dssp HHHHHHHHHTTS---------CT---T---TE-EEEEEETTEEEEEECCCSSCCHHHHHHHHHHTTEECCBS--------
T ss_pred HHHHHHHHHHHh---------cC---C---Cc-EEEEeeeeEEEEEEecCccHHHHHHHHHHHHCCeEEecC--------
Confidence 333333333321 11 1 11 11234578888888543 23556777777778876542
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 338 PCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 338 p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.++++|++++ .++++++++.|++++++
T Consensus 408 -------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 438 (439)
T 2oat_A 408 -------------------HGDIIRFAPPLVIKEDELRESIEIINKTILS 438 (439)
T ss_dssp -------------------SSSEEEECCCTTCCHHHHHHHHHHHHHHHHT
T ss_pred -------------------CCCEEEEECccCCCHHHHHHHHHHHHHHHHh
Confidence 1356999875 47788888888887764
No 169
>1z7d_A Ornithine aminotransferase; structural genomics consortium, SGC, malaria; 2.10A {Plasmodium yoelii yoelii} SCOP: c.67.1.4 PDB: 3lg0_A 3ntj_A
Probab=99.90 E-value=8e-23 Score=193.97 Aligned_cols=284 Identities=13% Similarity=0.118 Sum_probs=178.7
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHHHHHHh-c---------CCC-CEEEecCCCCCcHHHHHhhhcc-------
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALAAVTHL-L---------GTG-EEIVAGDDLYGGTDRLLSRVTP------- 115 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~~~~~-~---------~~g-~~Vlv~~~~~~~~~~~~~~~~~------- 115 (386)
.+.+.++++.+++++|.++.++++||++|+.+++.. . .+| |+|++.++.|++..........
T Consensus 106 ~~~~~~l~~~la~~~g~~~v~~~~sGseA~~~al~~a~~~~~~~~g~~~gr~~vi~~~~~yhg~~~~~~~~~g~~~~~~~ 185 (433)
T 1z7d_A 106 SVPLGICERYLTNLLGYDKVLMMNTGAEANETAYKLCRKWGYEVKKIPENMAKIVVCKNNFSGRTLGCISASTTKKCTSN 185 (433)
T ss_dssp EHHHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHHHHHHTSCCCTTCCEEEEETTC--------------------
T ss_pred CHHHHHHHHHHHhhcCCCeEEEeCCHHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEeCCcCCcchhhhcccCCcccccc
Confidence 357889999999999988899999999998744332 2 467 9999999999775321111111
Q ss_pred --cCCcEEEEeCCCCHHHHHhhh-CCCceEEEEeCCCCCCcccc----cHHHHHHHHHHcCCEEEEeCCCCC-CCcc---
Q 016612 116 --KTGVVVKRVNTCDLDEVASAI-GPWTKLVWVESPTNPRQQIC----DIRKIAEMAHAHGALLLVDNSIMS-PVLS--- 184 (386)
Q Consensus 116 --~~g~~~~~v~~~d~~~l~~~~-~~~~~~v~~~~~~nptG~~~----~l~~i~~la~~~~~~li~D~a~~~-~~~~--- 184 (386)
.....+..++..|++++++++ ++++++|++++.+|++|.+. ++++|.++|+++|++||+||+|+. +...
T Consensus 186 ~~p~~~~v~~~~~~d~~~le~~l~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~llI~DEv~~g~g~~g~~~ 265 (433)
T 1z7d_A 186 FGPFAPQFSKVPYDDLEALEEELKDPNVCAFIVEPIQGEAGVIVPSDNYLQGVYDICKKYNVLFVADEVQTGLGRTGKLL 265 (433)
T ss_dssp ------CEEEECTTCHHHHHHHHTSTTEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSS
T ss_pred CCCCCCCeEEeCCCCHHHHHHHhCCCCEEEEEEECCCCCCCccCCCHHHHHHHHHHHHHcCCEEEEecCccCCCcCCcch
Confidence 001356677778999999999 57889999888888899875 699999999999999999999962 1111
Q ss_pred --CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHH
Q 016612 185 --RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQD 259 (386)
Q Consensus 185 --~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 259 (386)
+......|++ |+||++++ | +++|++++++ ++.+.+...........++..++++...++.+.. ..++..+
T Consensus 266 ~~~~~~~~~di~--t~sK~l~~--G~~~~G~v~~~~-~~~~~l~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~ 340 (433)
T 1z7d_A 266 CVHHYNVKPDVI--LLGKALSG--GHYPISAVLAND-DIMLVIKPGEHGSTYGGNPLAASICVEALNVLINEKLCENAEK 340 (433)
T ss_dssp GGGGGTCCCSEE--EECGGGGT--TSSCCEEEEECH-HHHTTCCTTCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHH
T ss_pred hhHhcCCCCCEE--EECccccC--CCCCeEEEEECH-HHHhhhccccccccCCCCHHHHHHHHHHHHHHHhccHHHHHHH
Confidence 1112346776 78999963 6 7899999874 4544332221222234556666555555443321 2233344
Q ss_pred HHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcceeccCCCCcccccccc
Q 016612 260 NAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMP 338 (386)
Q Consensus 260 ~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~~~~G~~~~~~~~p 338 (386)
+.+.+.+.+++.. .+++ .. ...++.+.++++.+... ....++.+.+...|+.+.++
T Consensus 341 ~~~~l~~~L~~l~-------~~~~---~~----~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~Gv~v~~~--------- 397 (433)
T 1z7d_A 341 LGGPFLENLKREL-------KDSK---IV----RDVRGKGLLCAIEFKNELVNVLDICLKLKENGLITRDV--------- 397 (433)
T ss_dssp HHHHHHHHHHHHH-------TTCT---TE----EEEEEETTEEEEEECTTTCCHHHHHHHHHHTTEECCEE---------
T ss_pred HHHHHHHHHHHHH-------HhCC---Ce----EEEEeeeeEEEEEEccChhHHHHHHHHHHHCCeEEecC---------
Confidence 4444444444320 1111 10 11134578889988543 23566777777778876542
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.++++|++++ .++++++++.|++++++
T Consensus 398 ------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 428 (433)
T 1z7d_A 398 ------------------HDKTIRLTPPLCITKEQLDECTEIIVKTVKF 428 (433)
T ss_dssp ------------------TTTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 1345999875 37788888888877764
No 170
>2dgk_A GAD-beta, GADB, glutamate decarboxylase beta; gadbd1-14, autoinhibition, substituted aldamine, lyase; HET: PLP; 1.90A {Escherichia coli} PDB: 2dgm_A* 1pmo_A* 2dgl_A* 1pmm_A* 3fz6_A* 3fz7_A 3fz8_A* 1xey_A*
Probab=99.90 E-value=2.5e-22 Score=191.77 Aligned_cols=287 Identities=12% Similarity=-0.027 Sum_probs=186.1
Q ss_pred hHHHHHHHHHhhcCCC--c-----eEEeCcHHHHHH-HHHHhcC--------CC-----CEEEecCCCCCcHHHHHhhhc
Q 016612 56 TRDALESLLAKLDKAD--R-----ALCFTSGMAALA-AVTHLLG--------TG-----EEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~-----~i~~~~gt~al~-~~~~~~~--------~g-----~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
+.+++++++++++|.+ . .+++++||+|+. ++.++.+ +| ++|++++ .|.++. ..+
T Consensus 82 l~~~~~~~la~l~g~~~~~~~~~~~~~t~ggtea~~~al~a~~~~~~~~~~~~G~~~~~~~vi~~~-~h~~~~----~~~ 156 (452)
T 2dgk_A 82 IDLRCVNMVADLWHAPAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTDKPNLVCGP-VQICWH----KFA 156 (452)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEESS-CCHHHH----HHH
T ss_pred HHHHHHHHHHHHhCCCcccccCCceEEeCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcEEEECC-CcHHHH----HHH
Confidence 5778889999999986 2 577788888876 4444432 55 5899999 887775 556
Q ss_pred ccCCcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc------CCEEEEeCCCCCCC
Q 016612 115 PKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPV 182 (386)
Q Consensus 115 ~~~g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~------~~~li~D~a~~~~~ 182 (386)
+..|++++.++.+ |+++|+++++++|++|++++|+||||.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 157 ~~~G~~v~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~vD~a~~~~~ 236 (452)
T 2dgk_A 157 RYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKFQADTGIDIDMHIDAASGGFL 236 (452)
T ss_dssp HHTTCEEEECCCBTTBCSCCHHHHHHHCCTTEEEEECBBSCTTTCBBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HHcCceEEEEecCCCCCeECHHHHHHHHhhCCEEEEEEcCCcCCcccCCHHHHHHHHHHHhhccCCCCcEEEEcccHHHH
Confidence 6789999999863 89999999999999999999999999999999999999995 99999999998653
Q ss_pred c---c-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHH-HHHHHhhhhc----------CCCC--ChhhHH
Q 016612 183 L---S-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAE----------GSGL--APFDCW 241 (386)
Q Consensus 183 ~---~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~-~~~~~~~~~~----------~~~~--~~~~~~ 241 (386)
. . +....++|++++|+||++.+|.+ +|+++++++.+. +.+....... +... .....+
T Consensus 237 ~~~~~~~~~~~~~~~~~d~~~~~~hK~~~~~~~--~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~ 314 (452)
T 2dgk_A 237 APFVAPDIVWDFRLPRVKSISASGHKFGLAPLG--CGWVIWRDEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQY 314 (452)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECCTTCCEEECCSCCSCBCHHHHHHH
T ss_pred HHhhCccchhhcCCCCCcEEEECcccccCCCCC--eEEEEEcCHHHHHHHhccCccccCCCCCCcccCCCChhHHHHHHH
Confidence 2 1 11123789999999998766554 899999765432 2221100000 0100 112223
Q ss_pred HHHhc--CCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH----HhHHHH
Q 016612 242 ICLRG--VKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL----ALSKHV 315 (386)
Q Consensus 242 ~~~~~--~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----~~~~~l 315 (386)
+.+.. .+.+..+.++..++++.+.+.|++.+.+ .+..++. +....++++|.+++. .....+
T Consensus 315 aal~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~-~~~~~~~------------~~~~~~~v~f~~~~~~~~~~~~~~l 381 (452)
T 2dgk_A 315 YEFLRLGREGYTKVQNASYQVAAYLADEIAKLGPY-EFICTGR------------PDEGIPAVCFKLKDGEDPGYTLYDL 381 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSE-EEEEECC------------TTTBSSEEEEEECTTCCCSCCHHHH
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhCCCe-EEecCCC------------CCCCeEEEEEEecCcccccCCHHHH
Confidence 33222 1233445556666777777777765422 1111110 012457888887542 123566
Q ss_pred HhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 316 VETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 316 ~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
.+.+...|+.++... .|... .+.+++|++++. ++++++++.|+++++
T Consensus 382 ~~~L~~~Gi~v~~~~------~~~~~--------------~~~~~lRis~~~~~t~e~id~li~~l~~~~~ 432 (452)
T 2dgk_A 382 SERLRLRGWQVPAFT------LGGEA--------------TDIVVMRIMCRRGFEMDFAELLLEDYKASLK 432 (452)
T ss_dssp HHHHHHTTCBCCEEE------CSTTC--------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCeeeeee------CCccc--------------CCeEEEEEEecCCCCHHHHHHHHHHHHHHHH
Confidence 666666676543210 11000 024579999975 667777777776654
No 171
>3n0l_A Serine hydroxymethyltransferase; alpha beta class, 3-layer(ABA) sandwich, CSGI transferase, structural genomics; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.89 E-value=1.5e-21 Score=184.31 Aligned_cols=287 Identities=17% Similarity=0.128 Sum_probs=177.0
Q ss_pred HHHHHHHHHhhcCCCc-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhh-hcccCCcEEEEeCC-----CC
Q 016612 57 RDALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNT-----CD 128 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~-~~~~~g~~~~~v~~-----~d 128 (386)
.+.+++.+++++|.+. .+++++|++++. ++.+++++||+|++++|+|+++...... .....+..++.++. .|
T Consensus 73 ~~~~~~~la~~~g~~~~~i~~~sGt~a~~~~~~~~~~~gd~vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d 152 (417)
T 3n0l_A 73 ETLAIERCKKLFNCKFANVQPNSGSQANQGVYAALINPGDKILGMDLSHGGHLTHGAKVSSSGKMYESCFYGVELDGRID 152 (417)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHSCTTCEEEEECC----------------CCSEEEEECCCTTSSCC
T ss_pred HHHHHHHHHHHhCCCCcceEeccHHHHHHHHHHHhcCCCCEEEecccccccccchhhhhhhhcceeeeEeccCCCCCCcC
Confidence 3445668899999884 488899998887 5566899999999999999876432111 11123445555554 38
Q ss_pred HHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc-----cCCCCCCccEEEecccccc
Q 016612 129 LDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKFI 202 (386)
Q Consensus 129 ~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~-----~~~~~~~~di~~~S~sK~~ 202 (386)
++++++.++ +++++|++++++| |.+.|+++|.++|++||+++|+|++++.+.. ..... +.|++++|+||++
T Consensus 153 ~~~l~~~i~~~~~~~v~~~~~~~--G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~-~~di~~~s~sK~l 229 (417)
T 3n0l_A 153 YEKVREIAKKEKPKLIVCGASAY--ARVIDFAKFREIADEIGAYLFADIAHIAGLVVAGEHPSPFP-YAHVVSSTTHKTL 229 (417)
T ss_dssp HHHHHHHHHHHCCSEEEECCSSC--CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCCTT-TCSEEEEESSTTT
T ss_pred HHHHHHHHHhcCCeEEEECCccc--CccCCHHHHHHHHHHcCCEEEEECccchhhhhcccCCCccc-cceEEEeeCcccc
Confidence 999999997 6899999888886 8899999999999999999999999864432 11222 5799999999998
Q ss_pred ccCCCceEEEEEEcChhHHHHHHHhhhhcCC-CCChhhHHHHHhc----C-CcHHHHHHHHHHHHHHHHHHHhhCCCcce
Q 016612 203 AGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRG----V-KTMALRVEKQQDNAQKIAEFLASHPRVKK 276 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 276 (386)
+|+ |+|+++++++.+.+.+......... +.......+...+ . ..+....++..++.+.+.+.|++..
T Consensus 230 ~g~---~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g---- 302 (417)
T 3n0l_A 230 RGP---RGGIIMTNDEELAKKINSAIFPGIQGGPLMHVIAAKAVGFKFNLSDEWKVYAKQVRTNAQVLANVLMDRK---- 302 (417)
T ss_dssp CSC---SCEEEEESCHHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT----
T ss_pred CCC---CeeEEEECCHHHHHHHhhhhCCcccCCcHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC----
Confidence 553 5799999866676666554432222 2222222221111 1 2234455556666677777776521
Q ss_pred EecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 277 VNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 277 ~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
+ .+.. ....+.++++.+.. ......+.+.+...|+.++.+.. |..... .
T Consensus 303 -----~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------~~~~~~-----------~ 352 (417)
T 3n0l_A 303 -----F------KLVS--DGTDNHLVLMSFLDREFSGKDADLALGNAGITANKNTV------PGEIRS-----------P 352 (417)
T ss_dssp -----C------EEGG--GSCSSSEEEEECTTSSSCHHHHHHHHHHTTEECEECCC------TTCCSC-----------T
T ss_pred -----c------eecc--CCCCceEEEEEcccCCCCHHHHHHHHHHcCeEEecccc------CCCCcc-----------c
Confidence 1 1110 01235567777642 11345555666666776654321 100000 1
Q ss_pred CCCCeEEEEec--------cCChHHHHHHHHHHHhc
Q 016612 356 LTEDLVRISVG--------IEDVNDLISDLDKALRT 383 (386)
Q Consensus 356 ~~~~~iRis~~--------~~~~~~~i~~l~~~l~~ 383 (386)
.....+|+++. .++++++++.|+++++.
T Consensus 353 ~~~~~~ri~~~~~~~~~~~~~~i~~~~~~l~~~l~~ 388 (417)
T 3n0l_A 353 FITSGLRLGTPALTARGFKEKEMEIVSNYIADILDD 388 (417)
T ss_dssp TTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHT
T ss_pred CCCCeeEecCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 12456999974 37788888888888865
No 172
>1rv3_A Serine hydroxymethyltransferase, cytosolic; one-carbon metabolism; HET: GLY PLP; 2.40A {Oryctolagus cuniculus} SCOP: c.67.1.4 PDB: 1rv4_A* 1rvu_A* 1rvy_A* 1ls3_A* 1cj0_A* 1bj4_A* 1eji_A*
Probab=99.89 E-value=3.5e-22 Score=191.91 Aligned_cols=283 Identities=15% Similarity=0.096 Sum_probs=180.7
Q ss_pred hHHHHHHHHHhhcCCCc-----eEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhh----hcccCC--cEEEE
Q 016612 56 TRDALESLLAKLDKADR-----ALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSR----VTPKTG--VVVKR 123 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~-----~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~----~~~~~g--~~~~~ 123 (386)
+.+.+++++++++|.+. .+++++|++++.+ +.++++|||+|+++++.|+++..++.. .+...| .+.+.
T Consensus 91 le~~~~~~~a~~~g~~~~~~~~~V~~~sGs~an~~~~~all~pGD~Vl~~~~~~~~~~~~~~~~~~~~v~~~G~~~~~v~ 170 (483)
T 1rv3_A 91 LETLCQKRALQAYGLDPQCWGVNVQPYSGSPANFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTDKKKISATSIFFESMA 170 (483)
T ss_dssp HHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHTCTTCEEEEECGGGTCCGGGCCBCSSCBCSHHHHHSEEEE
T ss_pred HHHHHHHHHHHHhCCCcccCceEEEECCcHHHHHHHHHHhcCCCCEEEEecCccCcCcchhhhhcccCcccccceEEEEE
Confidence 35566699999999872 3889999977664 777899999999999999887532110 122222 44555
Q ss_pred eCC------CCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCCCc
Q 016612 124 VNT------CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGA 191 (386)
Q Consensus 124 v~~------~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~ 191 (386)
++. .|+++++++++ ++|++|++ +++|++ .+.|+++|.++|+++|+++++|++|+.+... .+.. ++
T Consensus 171 ~~~~~~~~~iD~d~le~~i~~~~tklIi~-~~sn~~-~~~dl~~i~~ia~~~g~~livD~ah~~g~~~~~~~~~p~~-~~ 247 (483)
T 1rv3_A 171 YKVNPDTGYIDYDRLEENARLFHPKLIIA-GTSCYS-RNLDYGRLRKIADENGAYLMADMAHISGLVVAGVVPSPFE-HC 247 (483)
T ss_dssp ECBCTTTCSBCHHHHHHHHHHHCCSEEEE-CCSSCC-SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHHTSSCCGGG-TC
T ss_pred CccccCCCcCCHHHHHHHHhhcCCcEEEE-eCCcCC-CcCCHHHHHHHHHHcCCEEEEEccchhcccccCCCCCCCC-CC
Confidence 421 38999999998 79999999 999988 8899999999999999999999998754322 2222 68
Q ss_pred cEEEeccccccccCCCceEEEEEEcCh--------------hHHHHHHHhhhhcCC-CCChhhHHHH---Hh-cC-CcHH
Q 016612 192 DIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQNAEGS-GLAPFDCWIC---LR-GV-KTMA 251 (386)
Q Consensus 192 di~~~S~sK~~~g~~g~~~G~i~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~~---~~-~~-~~~~ 251 (386)
|++++|+||++.|| |+|+++++++ .+.+.+......... +........+ +. .. ..+.
T Consensus 248 div~~s~~K~l~Gp---rgG~i~~~~~~~~~~~~~g~~~~y~~~~~~~~~~~~~~~g~~~~~~iaal~~Al~~~~~~~~~ 324 (483)
T 1rv3_A 248 HVVTTTTHKTLRGC---RAGMIFYRRGVRSVDPKTGKEILYNLESLINSAVFPGLQGGPHNHAIAGVAVALKQAMTPEFK 324 (483)
T ss_dssp SEEEEESSGGGCCC---SCEEEEEECSBCC-------CCBCCHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHTSHHHH
T ss_pred cEEEecCcccCCCC---CceEEEEcchhhhhccccCcchhhHHHHHhhhhcCCcccCCccHHHHHHHHHHHHHHhChhHH
Confidence 99999999999765 4699999865 233333222111111 1111111111 11 11 1345
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcceeccC---
Q 016612 252 LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVS--- 327 (386)
Q Consensus 252 ~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~~~--- 327 (386)
...++..++++.+.+.|.+.. + . +... .....++++.+... ...+.+.+.|...|+.++
T Consensus 325 ~~~~~~~~~~~~l~~~L~~~g-~-~-------------~~~~--~~~~~~~~v~~~~~g~~~~~~~~~L~~~gI~v~~~~ 387 (483)
T 1rv3_A 325 EYQRQVVANCRALSAALVELG-Y-K-------------IVTG--GSDNHLILVDLRSKGTDGGRAEKVLEACSIACNKNT 387 (483)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT-C-E-------------EGGG--SCSSSEEEEEGGGGTCCHHHHHHHHHHTTEECEEEC
T ss_pred HHHHHHHHHHHHHHHHHHhcC-C-E-------------eccC--CCCCceEEEeccCCCCCHHHHHHHHHhCCcEEecCC
Confidence 556667778888888877642 1 1 1100 00123455555321 123445555555677766
Q ss_pred -CCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec--------cCChHHHHHHHHHHHhc
Q 016612 328 -FGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLDKALRT 383 (386)
Q Consensus 328 -~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--------~~~~~~~i~~l~~~l~~ 383 (386)
+|... ...++++|||++ .++++++++.|.++++.
T Consensus 388 ~pg~~~----------------------~~~~~~iRis~~~~~t~g~~~edi~~~~~~l~~~l~~ 430 (483)
T 1rv3_A 388 CPGDKS----------------------ALRPSGLRLGTPALTSRGLLEKDFQKVAHFIHRGIEL 430 (483)
T ss_dssp CSSCSC----------------------TTSCCEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCc----------------------CCCCceEEeecCCcccCCCCHHHHHHHHHHHHHHHHh
Confidence 54421 013567999996 36788888888877754
No 173
>2eo5_A 419AA long hypothetical aminotransferase; PLP enzyme, structural genomics, NPPSFA, N project on protein structural and functional analyses; HET: PLP; 1.90A {Sulfolobus tokodaii}
Probab=99.89 E-value=2.1e-22 Score=190.40 Aligned_cols=276 Identities=13% Similarity=0.094 Sum_probs=172.0
Q ss_pred CchHHHHHHHHHhhcCCC---ceEEeCcHHHHHHHHHH-hcC-CCCEEEecCCCCCcHHHHHhhhcc----------cCC
Q 016612 54 NPTRDALESLLAKLDKAD---RALCFTSGMAALAAVTH-LLG-TGEEIVAGDDLYGGTDRLLSRVTP----------KTG 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~---~~i~~~~gt~al~~~~~-~~~-~g~~Vlv~~~~~~~~~~~~~~~~~----------~~g 118 (386)
.+.+.++++.+++++|.+ +++++++|++++..++. +.. +||+|++.+|.|++.......... ...
T Consensus 85 ~~~~~~l~~~la~~~~~~~~~~v~~~~gg~ea~~~ai~~~~~~~~~~vi~~~p~yh~~~~~~~~~~~~~~~~~~~~~~~~ 164 (419)
T 2eo5_A 85 NIPQLELAKKLVTYSPGNFQKKVFFSNSGTEAIEASIKVVKNTGRKYIIAFLGGFHGRTFGSISLTASKAVQRSIVGPFM 164 (419)
T ss_dssp CHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHTTSCCEEEEETTCCCCSSHHHHHHCCSCGGGGCSSCCCC
T ss_pred CHHHHHHHHHHHHhCCCCcCCEEEEeCchHHHHHHHHHHHHHhhCCcEEEECCCcCCCCHhhHhhcCCccccccccCCCC
Confidence 457889999999999863 56667778899875443 332 389999999999765332211111 111
Q ss_pred cEEEEeCCC---------------------CHHHHH-hhhC-----CCceEEEEeCCCCCCccccc----HHHHHHHHHH
Q 016612 119 VVVKRVNTC---------------------DLDEVA-SAIG-----PWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 119 ~~~~~v~~~---------------------d~~~l~-~~~~-----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 167 (386)
..++.++.+ |+++++ +.++ +++++|++++.+||+|.+.+ +++|.++|++
T Consensus 165 ~~~~~v~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~i~~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~ 244 (419)
T 2eo5_A 165 PGVIHVPYPNPYRNPWHINGYENPSELVNRVIEFIEDYIFVNLVPPEEVAGIFFEPIQGEGGYVIPPKNFFAELQKLAKK 244 (419)
T ss_dssp TTEEEECCCCSSSCTTCCCTTTCHHHHHHHHHHHHHHTHHHHTCCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHH
T ss_pred CCCEEECCCccccccccccccccchhhHHHHHHHHHHHHHhhccCCCCEEEEEEeCccCCCCCccCCHHHHHHHHHHHHH
Confidence 244555442 367888 7775 45677777766778898765 9999999999
Q ss_pred cCCEEEEeCCCC-CCCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHhhhhcCCCCChhhH
Q 016612 168 HGALLLVDNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQNAEGSGLAPFDC 240 (386)
Q Consensus 168 ~~~~li~D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (386)
||+++|+||+|+ .+... .......|++ |+||.+++ | +|+|+++++++ +. .+ ..........++..+
T Consensus 245 ~~~~li~DE~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~~~~--G~~riG~~~~~~~-~~-~~-~~~~~~t~~~n~~~~ 317 (419)
T 2eo5_A 245 YGILLVDDEVQMGLGRTGKLFAIENFNTVPDVI--TLAKALGG--GIMPIGATIFRKD-LD-FK-PGMHSNTFGGNALAC 317 (419)
T ss_dssp HTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--TTSCCEEEEEEGG-GC-CC-------CCCCCHHHH
T ss_pred cCCEEEEeccccCCccCcchhhHHhcCCCCCEE--EecccccC--CccceEEEEEchH-hh-cC-CcccCCCCCCCHHHH
Confidence 999999999987 32221 1112345655 68999963 7 89999999755 33 33 211222334566666
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-CHHhHHHHHhhc
Q 016612 241 WICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-SLALSKHVVETT 319 (386)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l 319 (386)
.++..+++......+...++.+.+.+.|++. + ...++.+.++++.+. +..... +.+.+
T Consensus 318 ~aa~aal~~~~~~~~~~~~~~~~l~~~L~~~----------~----------~~~~~~g~~~~i~~~~~~~~~~-~~~~l 376 (419)
T 2eo5_A 318 AIGSKVIDIVKDLLPHVNEIGKIFAEELQGL----------A----------DDVRGIGLAWGLEYNEKKVRDR-IIGES 376 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTS----------S----------SEEEEETTEEEEECSCHHHHHH-HHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----------h----------hheEeeeEEEEEEEecCccHHH-HHHHH
Confidence 6655555433332333334444444444321 0 011345788888883 323355 77777
Q ss_pred CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 320 KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 320 ~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
...|+.+++++ ++++||+++ .++++++++.|+++++++
T Consensus 377 ~~~Gv~v~~~~---------------------------~~~lRis~~~~~t~e~i~~~l~~l~~~l~~~ 418 (419)
T 2eo5_A 377 FKRGLLLLPAG---------------------------RSAIRVIPPLVISEEEAKQGLDILKKVIKVV 418 (419)
T ss_dssp HHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred HHCCCEEecCC---------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHhc
Confidence 77788765432 345999865 477888888888887653
No 174
>1o69_A Aminotransferase; structural genomics, unknown function; HET: X04; 1.84A {Campylobacter jejuni} SCOP: c.67.1.4 PDB: 1o62_A 1o61_A*
Probab=99.89 E-value=3.5e-21 Score=180.52 Aligned_cols=252 Identities=15% Similarity=0.092 Sum_probs=176.2
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHh-cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHL-LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~-~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----- 127 (386)
+...++++.+++++|.++.+++++|++++.+ +.++ +++||+|+++.|+|+++... ++..|.+++.++.+
T Consensus 32 ~~~~~l~~~la~~~~~~~v~~~~ggt~al~~~~~~l~~~~gd~Vl~~~~~~~~~~~~----~~~~g~~~~~v~~~~~~~~ 107 (394)
T 1o69_A 32 EFVNRFEQSVKDYSKSENALALNSATAALHLALRVAGVKQDDIVLASSFTFIASVAP----ICYLKAKPVFIDCDETYNI 107 (394)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEESCHHHHHHHHHHHTTCCTTCEEEEESSSCGGGTHH----HHHTTCEEEEECBCTTSSB
T ss_pred hHHHHHHHHHHHHhCCCcEEEeCCHHHHHHHHHHHcCCCCCCEEEECCCccHHHHHH----HHHcCCEEEEEEeCCCCCc
Confidence 5688999999999999888899999999974 5556 78999999999999998644 34578899888853
Q ss_pred CHHHHHhhhCC---CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCC---C-CCccEEEecccc
Q 016612 128 DLDEVASAIGP---WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPL---E-LGADIVMHSATK 200 (386)
Q Consensus 128 d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~---~-~~~di~~~S~sK 200 (386)
|++++++.+++ ++++|++++ |+|...++++|.++|+++|+++|+|++|+.+...... . .+.|+..+|.+|
T Consensus 108 d~~~l~~~i~~~~~~~~~v~~~~---~~G~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~~~~s~s~~K 184 (394)
T 1o69_A 108 DVDLLKLAIKECEKKPKALILTH---LYGNAAKMDEIVEICKENDIVLIEDAAEALGSFYKNKALGTFGEFGVYSYNGNK 184 (394)
T ss_dssp CHHHHHHHHHHCSSCCCEEEEEC---GGGCCCCHHHHHHHHHHTTCEEEEECTTCTTCEETTEETTSSSSEEEEECCTTS
T ss_pred CHHHHHHHHhcccCCceEEEEEC---CCCChhhHHHHHHHHHHcCCEEEEECcCcccceeCCcccccccCcEEEEEeCCc
Confidence 88999998875 799999886 7999999999999999999999999999865432111 1 245677777789
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhhhhcCC--------------CCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS--------------GLAPFDCWICLRGVKTMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 266 (386)
.+++ . ++|+++++++++.+.+......... .+++..+.+.+..++.+....++..++.+.+.+
T Consensus 185 ~l~~-~--~~G~~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~~aa~~l~~l~~l~~~~~~~~~~~~~l~~ 261 (394)
T 1o69_A 185 IITT-S--GGGMLIGKNKEKIEKARFYSTQARENCLHYEHLDYGYNYRLSNVLGAIGVAQMEVLEQRVLKKREIYEWYKE 261 (394)
T ss_dssp SSCC-S--SCEEEEESCHHHHHHHHHHTBTCCCSSSSCCCSSCCCBCBCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred cCCC-C--CceEEEECCHHHHHHHHHHHHhccccCccccccccCcccCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8853 2 5899999766666655544322110 033344444444455566666677777777777
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH---------------------HhHHHHHhhcCcceec
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---------------------ALSKHVVETTKYFSIT 325 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---------------------~~~~~l~~~l~~~gi~ 325 (386)
.|++. + .+ .+. ... ......++++.++.. .....+.+.|...|+.
T Consensus 262 ~L~~~--~-~~-~~~-~~~---------~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~ 327 (394)
T 1o69_A 262 FLGEY--F-SF-LDE-LEN---------SRSNRWLSTALINFDKNELNACQKDINISQKNITLHPKISKLIEDLKNKQIE 327 (394)
T ss_dssp HHTTT--E-EC-CCC-CTT---------EECCCSSEEEEESCCGGGSCCCCEEEECCCCCCCCCHHHHHHHHHHHHTTCC
T ss_pred Hhccc--c-cc-cCC-CCC---------CcceeEEEEEEecchhhccccccccccccccccccccCHHHHHHHHHHcCCc
Confidence 77653 1 11 111 000 001112566776532 2466788888888998
Q ss_pred cCCCC
Q 016612 326 VSFGS 330 (386)
Q Consensus 326 ~~~G~ 330 (386)
++.|.
T Consensus 328 v~~~~ 332 (394)
T 1o69_A 328 TRPLW 332 (394)
T ss_dssp CBCCC
T ss_pred ccccC
Confidence 88774
No 175
>3hbx_A GAD 1, glutamate decarboxylase 1; calmodulin-binding, lyase, pyridoxal phosphate; HET: LLP; 2.67A {Arabidopsis thaliana}
Probab=99.89 E-value=4.9e-22 Score=191.79 Aligned_cols=286 Identities=15% Similarity=0.109 Sum_probs=192.2
Q ss_pred hHHHHHHHHHhhcCCC-------ceEEeCcHHHHHH-HHHHhcCC--------CC-----EEEecCCCCCcHHHHHhhhc
Q 016612 56 TRDALESLLAKLDKAD-------RALCFTSGMAALA-AVTHLLGT--------GE-----EIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-------~~i~~~~gt~al~-~~~~~~~~--------g~-----~Vlv~~~~~~~~~~~~~~~~ 114 (386)
+.+++++++++++|.+ ..+++++|++++. +++++..+ |+ +|+++.+.|.++. ..+
T Consensus 96 le~~~~~~la~l~g~~~~~~~~~~g~~t~ggtea~~~a~~a~~~~~~~~~~~~G~~~~~~~vi~~~~~h~s~~----~~~ 171 (502)
T 3hbx_A 96 LQNRCVNMIAHLFNAPLEEAETAVGVGTVGSSEAIMLAGLAFKRKWQNKRKAEGKPVDKPNIVTGANVQVCWE----KFA 171 (502)
T ss_dssp HHHHHHHHHHHHTTCCCCSSCCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCCCSCCEEEEETTCCHHHH----HHH
T ss_pred HHHHHHHHHHHHhCCCcccccCCcceecCcHHHHHHHHHHHHHHHHhHHHHhcCCCCCCcEEEEcCCchHHHH----HHH
Confidence 4667888899999987 2345788888875 45555443 76 8999999998875 556
Q ss_pred ccCCcEEEEeCCC------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHc------CCEEEEeCCCCCCC
Q 016612 115 PKTGVVVKRVNTC------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAH------GALLLVDNSIMSPV 182 (386)
Q Consensus 115 ~~~g~~~~~v~~~------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~------~~~li~D~a~~~~~ 182 (386)
+..|++++.++.+ |++++++++++++++|++++++||||.+.|+++|.++|+++ |+++++|++|+.+.
T Consensus 172 ~~~G~~~~~v~~~~~~~~~d~~~l~~~i~~~t~~v~~~~~~n~tG~~~~l~~I~~ia~~~~~~~~~~~~l~VD~A~~~~~ 251 (502)
T 3hbx_A 172 RYFEVELKEVKLSEGYYVMDPQQAVDMVDENTICVAAILGSTLNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFI 251 (502)
T ss_dssp HHTTCEEEEECCBTTBCSCCHHHHHHHCCTTEEEEEEEBSCTTTCCBCCHHHHHHHHHHHHHHHCCCCCEEEECTTGGGT
T ss_pred HHcCceeEEEecCCCcCcCCHHHHHHHHhhCCEEEEEecCCCCCCcccCHHHHHHHHHHhhhccCCCCeEEEECCccchh
Confidence 6788999888853 89999999999999999999999999999999999999999 99999999997433
Q ss_pred c---c-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHH-HHHHHhhhhcC----------CCC--ChhhHH
Q 016612 183 L---S-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQNAEG----------SGL--APFDCW 241 (386)
Q Consensus 183 ~---~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~-~~~~~~~~~~~----------~~~--~~~~~~ 241 (386)
. . +....++|++..|++|++.+|.| +|+++++++... +.+.......+ +.. .....+
T Consensus 252 ~p~~~~~~~~~~~~~~~D~v~~s~hK~l~~p~g--~G~~~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~sr~~~~~~a~~ 329 (502)
T 3hbx_A 252 APFLYPELEWDFRLPLVKSINVSGHKYGLVYAG--IGWVIWRNKEDLPEELIFHINYLGADQPTFTLNFSKGSSQVIAQY 329 (502)
T ss_dssp HHHHCTTCCCSTTSTTEEEEEEETTTTTCCCSS--CEEEEESSGGGSCGGGCEEECSSSSCEEECCSCCSCBSHHHHHHH
T ss_pred hhhhCcccccccCCCCceEEEECcccccCCCCC--eEEEEEeCHHHhhHHhccCcccccCCCCCccccCCchHHHHHHHH
Confidence 1 1 11123789999999999988776 688877765432 21111001100 000 112223
Q ss_pred HHHh--cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--HhHHHHHh
Q 016612 242 ICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--ALSKHVVE 317 (386)
Q Consensus 242 ~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~l~~ 317 (386)
+.+. +.+.+..+.++..++++.+.+.|++.+.+. +..+ ....++++|.+.+. .....+.+
T Consensus 330 ~al~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~~-~~~~---------------~~~~~~v~f~~~~~~~~~~~~l~~ 393 (502)
T 3hbx_A 330 YQLIRLGHEGYRNVMENCRENMIVLREGLEKTERFN-IVSK---------------DEGVPLVAFSLKDSSCHTEFEISD 393 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCEE-ECSC---------------SSSSSEEEEEESSCSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEE-EEeC---------------CCCceEEEEEecCCCcCCHHHHHH
Confidence 3222 223445666777778888888888765321 1110 01357888888542 23456777
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.|...|+.++. +..|... .+..++||+++ .++++.+++.|+++++.
T Consensus 394 ~L~~~Gi~v~~------~~~p~~~--------------~~~~~lRisv~~~~t~edid~li~~L~~~l~~ 443 (502)
T 3hbx_A 394 MLRRYGWIVPA------YTMPPNA--------------QHITVLRVVIREDFSRTLAERLVIDIEKVMRE 443 (502)
T ss_dssp HHHTTTCBCCE------EECCTTC--------------TTCEEEEEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCcEEee------ccCCccc--------------CCceEEEEEeCCCCCHHHHHHHHHHHHHHHHH
Confidence 77777776532 1112100 12457999997 47778888888777754
No 176
>1sff_A 4-aminobutyrate aminotransferase; enzyme complexes; HET: IK2; 1.90A {Escherichia coli} SCOP: c.67.1.4 PDB: 1sf2_A* 1szk_A* 1szu_A* 1szs_A*
Probab=99.89 E-value=1.1e-22 Score=192.83 Aligned_cols=283 Identities=14% Similarity=0.143 Sum_probs=173.9
Q ss_pred chHHHHHHHHHhhc-C-C-CceEEeCcHHHHHHHH-H---HhcCCCCEEEecCCCCCcHHHHHhhhccc-------CCc-
Q 016612 55 PTRDALESLLAKLD-K-A-DRALCFTSGMAALAAV-T---HLLGTGEEIVAGDDLYGGTDRLLSRVTPK-------TGV- 119 (386)
Q Consensus 55 ~~~~~l~~~l~~~~-g-~-~~~i~~~~gt~al~~~-~---~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-------~g~- 119 (386)
+...++++.+++++ | . ++.+++++|++|+.++ . .+.++| .|++.+|.|++....+...... ++.
T Consensus 84 ~~~~~l~~~la~~~~~~~~~~v~~~~g~~~a~~~~~~~a~~~~~~~-~vi~~~p~y~~~~~~~~~~~g~~~~~~~~~~~~ 162 (426)
T 1sff_A 84 EPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVKIARAATKRS-GTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLM 162 (426)
T ss_dssp HHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHTCC-EEEEETTCCCCSSHHHHHHSSCCTTTTTTSCCC
T ss_pred HHHHHHHHHHHHhCCcccccEEEEeCchHHHHHHHHHHHHHhhCCC-eEEEECCCcCCCchHhhhhcCCccccccccCCC
Confidence 46778999999988 5 3 3566777778998744 3 356676 8999999997754221122111 111
Q ss_pred --EEEEeCCC----------CHHHHHhhhC-----CCceEEEEe-CCCCCCccccc----HHHHHHHHHHcCCEEEEeCC
Q 016612 120 --VVKRVNTC----------DLDEVASAIG-----PWTKLVWVE-SPTNPRQQICD----IRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 120 --~~~~v~~~----------d~~~l~~~~~-----~~~~~v~~~-~~~nptG~~~~----l~~i~~la~~~~~~li~D~a 177 (386)
.++.++.+ |++++++.++ +++++|+++ +++| ||.+.+ +++|.++|++||++||+||+
T Consensus 163 ~~~v~~v~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~v~~~p~~~n-tG~~~~~~~~l~~l~~l~~~~~~~li~De~ 241 (426)
T 1sff_A 163 PGHVYRALYPCPLHGISEDDAIASIHRIFKNDAAPEDIAAIVIEPVQGE-GGFYASSPAFMQRLRALCDEHGIMLIADEV 241 (426)
T ss_dssp CSSEEEECCCBGGGTBCHHHHHHHHHHHHHHTCCGGGEEEEEECSBCTT-TTSCBCCHHHHHHHHHHHHHHTCEEEEECT
T ss_pred CCCcEEeCCCccccccchHHHHHHHHHHHHhccCCCceEEEEEecccCC-CCcccCCHHHHHHHHHHHHHcCCEEEEech
Confidence 14444432 6788888875 467888885 4567 997776 99999999999999999999
Q ss_pred CCC-CCcc-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH
Q 016612 178 IMS-PVLS-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA 251 (386)
Q Consensus 178 ~~~-~~~~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 251 (386)
|+. +... +......|++ |+||+++ + |+|+|++++++ ++.+.+...........++..+.++..+++.+.
T Consensus 242 ~~~~~~~g~~~~~~~~~~~~di~--s~sK~~~-~-GlriG~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~a~~aal~~~~ 316 (426)
T 1sff_A 242 QSGAGRTGTLFAMEQMGVAPDLT--TFAKSIA-G-GFPLAGVTGRA-EVMDAVAPGGLGGTYAGNPIACVAALEVLKVFE 316 (426)
T ss_dssp TTTTTTTSSSSGGGGTTSCCSEE--EECGGGG-T-SSCCEEEEEEH-HHHTTSCTTSBCCSSSSCHHHHHHHHHHHHHHH
T ss_pred hhccCcccchhhhhhcCCCCCEE--EEccccc-C-CCceEEEEEcH-HHHhhhccCCcCcCCCCCHHHHHHHHHHHHHHH
Confidence 982 1111 1112235655 7899995 4 79999999974 454433221122223455666655554443322
Q ss_pred H--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC--------CHHhHHHHHhhcCc
Q 016612 252 L--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG--------SLALSKHVVETTKY 321 (386)
Q Consensus 252 ~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~--------~~~~~~~l~~~l~~ 321 (386)
. ..++..++.+.+.+.+++.. ..+ +... ..++.+.++++.+. +......+.+.+..
T Consensus 317 ~~~~~~~~~~~~~~l~~~l~~~~-------~~~---~~~~----~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 382 (426)
T 1sff_A 317 QENLLQKANDLGQKLKDGLLAIA-------EKH---PEIG----DVRGLGAMIAIELFEDGDHNKPDAKLTAEIVARARD 382 (426)
T ss_dssp HTTHHHHHHHHHHHHHHHHHHHH-------HTC---TTEE----EEEEETTEEEEEEBGGGCTTSBCHHHHHHHHHHHHH
T ss_pred hcCHHHHHHHHHHHHHHHHHHHH-------HhC---CCeE----EEEEEEEEEEEEEecCccccCCChHHHHHHHHHHHH
Confidence 1 22333444444444444311 001 1000 11224788888883 23346677777777
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.|+.+.+|.. .++++|++++ .++++++++.|++++++
T Consensus 383 ~gi~v~~~~~-------------------------~~~~iRi~~~~~~~~~~i~~~~~~l~~~l~~ 423 (426)
T 1sff_A 383 KGLILLSCGP-------------------------YYNVLRILVPLTIEDAQIRQGLEIISQCFDE 423 (426)
T ss_dssp TTEECEEEST-------------------------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CCcEEecCCC-------------------------CCCEEEEECCccCCHHHHHHHHHHHHHHHHH
Confidence 7887766543 1456999985 37788888888887764
No 177
>2c0r_A PSAT, phosphoserine aminotransferase; pyridoxal-5'-phosphate, pyridine serine biosynthesis, amino-acid biosynthesis, pyridoxal phosphate; HET: PLP; 1.2A {Bacillus circulans} SCOP: c.67.1.4 PDB: 1bt4_A* 1w3u_A*
Probab=99.89 E-value=7.2e-23 Score=189.80 Aligned_cols=273 Identities=14% Similarity=0.059 Sum_probs=171.0
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeC-cHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 56 TRDALESLLAKLDKAD---RALCFT-SGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~-~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
+++++++.+++++|.+ +.++++ +|+++++ ++.++++|||+|+++++.|.+.. +...++..| +++.++.+
T Consensus 50 ~~~~~~~~la~~~g~~~~~~~i~~t~g~t~a~~~~~~~l~~~gd~vl~~~~~~~~~~--~~~~~~~~g-~~~~v~~~~~~ 126 (362)
T 2c0r_A 50 VHNEAQARLLALLGNPTGYKVLFIQGGASTQFAMIPMNFLKEGQTANYVMTGSWASK--ALKEAKLIG-DTHVAASSEAS 126 (362)
T ss_dssp HHHHHHHHHHHHTTCCSSEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHH--HHHHHHHHS-CEEEEEECGGG
T ss_pred HHHHHHHHHHHHhCCCCCcEEEEECCCchHHHHHHHHhcCCCCCeEEEEecCcHhHH--HHHHHHHhC-CeEEEeccccc
Confidence 6889999999999987 335564 5569987 55668899999998876654431 123445567 66666532
Q ss_pred ------CHHHHHhhhCCCceEEEEeCCCCCCccc-ccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEecccc
Q 016612 128 ------DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATK 200 (386)
Q Consensus 128 ------d~~~l~~~~~~~~~~v~~~~~~nptG~~-~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK 200 (386)
|.++++ ++++|++|++++++||||.+ .|+++| +|+++++|++|+.+....... ..|++++|+||
T Consensus 127 ~~~~~~~~~~~~--i~~~t~~v~~~~~~n~tG~~~~~l~~i------~~~~vivD~a~~~~~~~~~~~-~~d~~~~s~~K 197 (362)
T 2c0r_A 127 NYMTLPKLQEIQ--LQDNAAYLHLTSNETIEGAQFKAFPDT------GSVPLIGDMSSDILSRPFDLN-QFGLVYAGAQK 197 (362)
T ss_dssp TTCSCCCGGGCC--CCTTEEEEEEESEETTTTEECSSCCCC------TTSCEEEECTTTTTSSCCCGG-GCSEEEEETTT
T ss_pred ccccCCCHHHcc--cCCCcCEEEEeCCcCccceeccccccc------CCCEEEEEChhhccCCccchh-HCcEEEEeccc
Confidence 333332 67889999999999999996 677776 899999999998776532222 24899999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHh------------hhhcCCCCChhhHHHHHhcCCc------HHHHHHHHHHHHH
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFL------------QNAEGSGLAPFDCWICLRGVKT------MALRVEKQQDNAQ 262 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 262 (386)
++ |+.| +|+++++++.+ +.+... ........+....+.+..+++. +..+.++..++.+
T Consensus 198 ~~-g~~G--~G~l~~~~~~~-~~l~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~~~~~~~~~~~~~~~~ 273 (362)
T 2c0r_A 198 NL-GPSG--VTVVIVREDLV-AESPKHLPTMLRYDTYVKNNSLYNTPPSFGIYMVNEVLKWIEERGGLEGVQQANRKKAS 273 (362)
T ss_dssp TT-CCSS--CEEEEEEGGGS-SSCCTTSCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cc-cCcC--cEEEEEcHHHH-hhccccCchHHhHHHHhhccCcCCCchHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99 5777 79999875432 222110 0011123344444444444332 3344455555566
Q ss_pred HHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccccc
Q 016612 263 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMS 342 (386)
Q Consensus 263 ~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~ 342 (386)
.+.+.|++.+. + ..+........++++++.+++......+.+.+...|+.+.+|..+
T Consensus 274 ~l~~~L~~~~~--------~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gi~~~~g~~~---------- 330 (362)
T 2c0r_A 274 LIYDAIDQSGG--------F-----YRGCVDVDSRSDMNITFRLASEELEKEFVKASEQEGFVGLKGHRS---------- 330 (362)
T ss_dssp HHHHHHHTSTT--------S-----SEESSCGGGBCSSEEEEECSCHHHHHHHHHHHHHTTEESCBCCTT----------
T ss_pred HHHHHHHHcCC--------c-----cccCCChHHcCCcEEEEEcCCcchHHHHHHHHHHCCCeeccCCCC----------
Confidence 66666665421 1 001000001124677888865545677888887778876554321
Q ss_pred CCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 343 HASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 343 ~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
.+++|+|++. ++++++++.|++.++
T Consensus 331 ---------------~~~iRis~~~~~~~e~i~~l~~~l~~~~~ 359 (362)
T 2c0r_A 331 ---------------VGGLRASIYNAVPYESCEALVQFMEHFKR 359 (362)
T ss_dssp ---------------TCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred ---------------CCEEEEECCCCCCHHHHHHHHHHHHHHHH
Confidence 2359999974 566666666666554
No 178
>2ay1_A Aroat, aromatic amino acid aminotransferase; HET: PLP AHC; 2.20A {Paracoccus denitrificans} SCOP: c.67.1.1 PDB: 1ay5_A* 1ay4_A* 1ay8_A* 2ay2_A* 2ay3_A* 2ay4_A* 2ay5_A* 2ay6_A* 2ay7_A* 2ay8_A* 2ay9_A*
Probab=99.89 E-value=2.5e-22 Score=188.36 Aligned_cols=165 Identities=16% Similarity=0.181 Sum_probs=119.6
Q ss_pred CccccCC-CCc-hHHHHHHHHHhhc-CCCceEE--eCcHHHHHHHHHH-h--cCCCCEEEecCCCCCcHHHHHhhhcccC
Q 016612 46 PYDYTRS-GNP-TRDALESLLAKLD-KADRALC--FTSGMAALAAVTH-L--LGTGEEIVAGDDLYGGTDRLLSRVTPKT 117 (386)
Q Consensus 46 ~~~y~~~-g~~-~~~~l~~~l~~~~-g~~~~i~--~~~gt~al~~~~~-~--~~~g~~Vlv~~~~~~~~~~~~~~~~~~~ 117 (386)
.+.|... |.+ +++++.+++.... ..++.++ +++|++|+.++.. + +.+||+|++++|+|+++. ..++..
T Consensus 62 ~~~y~~~~g~~~lr~~la~~~~~~~~~~~~v~~~~~~g~~~a~~~~~~~~~~~~~gd~vl~~~p~~~~~~----~~~~~~ 137 (394)
T 2ay1_A 62 TKTYAGLSGEPEFQKAMGELILGDGLKSETTATLATVGGTGALRQALELARMANPDLRVFVSDPTWPNHV----SIMNFM 137 (394)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHGGGCCGGGEEEEEEEHHHHHHHHHHHHHHHHCTTCCEEEEESCCHHHH----HHHHHH
T ss_pred cCCCCCCCCcHHHHHHHHHHHhCCCCCcccEEEEecCCchhHHHHHHHHHHhcCCCCEEEEcCCCChhHH----HHHHHc
Confidence 4457654 554 5666666653221 2235555 6777799875543 3 349999999999999886 344566
Q ss_pred CcEEEEeCC---C----CHHHHHhhhCC---CceEEEEeCCCCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCcc
Q 016612 118 GVVVKRVNT---C----DLDEVASAIGP---WTKLVWVESPTNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLS 184 (386)
Q Consensus 118 g~~~~~v~~---~----d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~ 184 (386)
|.+++.++. + |++++++.+++ +++++++++|+||||.+.+ +++|.++|+++|+++|+||+|+.....
T Consensus 138 g~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~~~~~nptG~~~~~~~l~~i~~~~~~~~~~li~De~~~~~~~~ 217 (394)
T 2ay1_A 138 GLPVQTYRYFDAETRGVDFEGMKADLAAAKKGDMVLLHGCCHNPTGANLTLDQWAEIASILEKTGALPLIDLAYQGFGDG 217 (394)
T ss_dssp TCCEEEEECEETTTTEECHHHHHHHHHTCCTTCEEEEESSSCTTTCCCCCHHHHHHHHHHHHHHTCEEEEEECCTTSSSC
T ss_pred CCceEEEecccccCCccCHHHHHHHHHhCCCCCEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEecCccccccC
Confidence 788888776 2 78999988864 3677888999999999986 668999999999999999999754321
Q ss_pred ------CC--C-C-CCccEEEeccccccccCCCceEEEEEE
Q 016612 185 ------RP--L-E-LGADIVMHSATKFIAGHSDVMAGVLAV 215 (386)
Q Consensus 185 ------~~--~-~-~~~di~~~S~sK~~~g~~g~~~G~i~~ 215 (386)
.. . . ...+++++|+||++ |++|+|+|++++
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~~s~sK~~-~~~G~riG~~~~ 257 (394)
T 2ay1_A 218 LEEDAAGTRLIASRIPEVLIAASCSKNF-GIYRERTGCLLA 257 (394)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEECTTTT-TCGGGCEEEEEE
T ss_pred cccchHHHHHHhhcCCCEEEEEeccCCC-cCcCCccceEEE
Confidence 01 1 1 13468899999999 556899999998
No 179
>2vi8_A Serine hydroxymethyltransferase; SHMT, E53Q, FTHF, enzyme memory, pyridoxal phosphate, one-carbon metabolism, PLP-dependent enzymes; HET: PLP; 1.67A {Bacillus stearothermophilus} PDB: 2vi9_A* 2via_A* 2vib_A* 1kkj_A* 1kkp_A* 1kl1_A* 1kl2_A* 1yjs_A* 2w7f_A* 2w7d_A* 2w7e_A* 2w7g_A* 2w7h_A* 1yjz_A* 1yjy_A* 2vgu_A* 2vgs_A* 2vgt_A* 2vgv_A* 2vgw_A* ...
Probab=99.89 E-value=2.3e-22 Score=189.20 Aligned_cols=285 Identities=18% Similarity=0.145 Sum_probs=180.2
Q ss_pred HHHHHHHhhcCCCce-EEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCC------CC
Q 016612 59 ALESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNT------CD 128 (386)
Q Consensus 59 ~l~~~l~~~~g~~~~-i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~------~d 128 (386)
++++++++++|.+.. +++++|++++. ++.+++++||+|++++|.|+++...+ ......|. +++.++. .|
T Consensus 73 ~~r~~la~~~g~~~~~i~~~sGt~a~~~a~~~~~~~gd~Vl~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~d 151 (405)
T 2vi8_A 73 LARERAKQLFGAEHANVQPHSGAQANMAVYFTVLEHGDTVLGMNLSHGGHLTHG-SPVNFSGVQYNFVAYGVDPETHVID 151 (405)
T ss_dssp HHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCTTTT-CTTSHHHHHSEEEEECBCTTTCSBC
T ss_pred HHHHHHHHHhCCCceEEEecCcHHHHHHHHHHhcCCCCEEEEecccccchhccc-chhhhccceeEEEecccccccCCcC
Confidence 355799999998854 45688999987 55667899999999999998774210 00112232 6666653 28
Q ss_pred HHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccC-CCC---CCccEEEeccccccc
Q 016612 129 LDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSR-PLE---LGADIVMHSATKFIA 203 (386)
Q Consensus 129 ~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~-~~~---~~~di~~~S~sK~~~ 203 (386)
++++++.+++ ++++|+++ ++|. |...++++|.++|+++|+++|+|++|+.+.... ... .+.|++++|+||+++
T Consensus 152 ~~~l~~~i~~~~~~~v~~~-~~~~-~~~~~l~~i~~l~~~~~~~li~Dea~~~g~~~~~~~~~~~~~~di~~~s~sK~~~ 229 (405)
T 2vi8_A 152 YDDVREKARLHRPKLIVAA-AAAY-PRIIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHPNPVPYAHFVTTTTHKTLR 229 (405)
T ss_dssp HHHHHHHHHHHCCSEEEEC-CSSC-CSCCCHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCSTTTCSEEEEESSSTTC
T ss_pred HHHHHHHHHhcCCeEEEEe-CCCC-CccCCHHHHHHHHHHcCCEEEEEccccccccccCcCCCccccCCEEEEeccccCC
Confidence 9999999875 88888874 4443 566789999999999999999999998443211 111 157899999999997
Q ss_pred cCCCceEEEEEEcChhHHHHHHHhhhhcCC-CCChhhHHHHHhcCC-----cHHHHHHHHHHHHHHHHHHHhhCCCcceE
Q 016612 204 GHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICLRGVK-----TMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 277 (386)
|+.| |+++++ +++.+.+......... +.+..+...+..+++ .+....++..++.+.+.+.|++..
T Consensus 230 g~~g---G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~aa~~~al~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g----- 300 (405)
T 2vi8_A 230 GPRG---GMILCQ-EQFAKQIDKAIFPGIQGGPLMHVIAAKAVAFGEALQDDFKAYAKRVVDNAKRLASALQNEG----- 300 (405)
T ss_dssp CCSC---EEEEEC-HHHHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHHHTT-----
T ss_pred CCCC---eEEEEc-HHHHHHHHhhhcccccCCCCHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhCC-----
Confidence 6664 999987 5566555544322222 223333333222222 223344455555666666665431
Q ss_pred ecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCC
Q 016612 278 NYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGL 356 (386)
Q Consensus 278 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~ 356 (386)
+.+.. +.+.+.++++.++.. .....+.+.+...|+.+++|.... ...+ ..
T Consensus 301 ----------~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~g~~~~-~~~~----------------~~ 351 (405)
T 2vi8_A 301 ----------FTLVS--GGTDNHLLLVDLRPQQLTGKTAEKVLDEVGITVNKNTIPY-DPES----------------PF 351 (405)
T ss_dssp ----------CEEGG--GSCSSSEEEEECGGGTCCHHHHHHHHHHHTEECEEECCTT-CSSC----------------TT
T ss_pred ----------CeEec--CCCCceEEEEEccCCCCCHHHHHHHHHHcCceeccCcCcc-ccCC----------------CC
Confidence 11111 122467788887531 135566677777788777654210 0000 01
Q ss_pred CCCeEEEEec--------cCChHHHHHHHHHHHhcC
Q 016612 357 TEDLVRISVG--------IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 357 ~~~~iRis~~--------~~~~~~~i~~l~~~l~~~ 384 (386)
.++++|+|++ .++++++++.|++++++.
T Consensus 352 ~~~~iRis~~~~~~~~~~~~~i~~~~~~l~~~~~~~ 387 (405)
T 2vi8_A 352 VTSGIRIGTAAVTTRGFGLEEMDEIAAIIGLVLKNV 387 (405)
T ss_dssp TCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHTCT
T ss_pred CCCceEEeeeeeeecCCCHHHHHHHHHHHHHHHhcc
Confidence 2467999997 478888888888888654
No 180
>3ecd_A Serine hydroxymethyltransferase 2; ssgcid, decode, bupsa00008A, one-carbon metabolism, pyridoxa phosphate, structural genomics; 1.60A {Burkholderia pseudomallei}
Probab=99.89 E-value=2.5e-21 Score=183.24 Aligned_cols=288 Identities=16% Similarity=0.140 Sum_probs=172.5
Q ss_pred hHHH-HHHHHHhhcCCCce-EEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHH-HhhhcccCCcEEEEeCCC----
Q 016612 56 TRDA-LESLLAKLDKADRA-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRL-LSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 56 ~~~~-l~~~l~~~~g~~~~-i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~-~~~~~~~~g~~~~~v~~~---- 127 (386)
.+++ .++.+++++|.+.. +++++|++++. ++.+++++||+|++++|.|++.... ........+.+.+.++.+
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~v~~~~Gs~a~~~al~~~~~~gd~Vi~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 157 (425)
T 3ecd_A 78 EVEALAIERVKRLFNAGHANVQPHSGAQANGAVMLALAKPGDTVLGMSLDAGGHLTHGAKPALSGKWFNALQYGVSRDTM 157 (425)
T ss_dssp HHHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECC------------------CEEEEECCCTTTS
T ss_pred HHHHHHHHHHHHHhCCCCceeecCchHHHHHHHHHHccCCCCEEEEcccccccceecchhhhhcccceeeeecCCCcccC
Confidence 4444 45888899999865 45889998886 5566889999999999999873211 111112223355555543
Q ss_pred --CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCCCccEEEeccc
Q 016612 128 --DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHSAT 199 (386)
Q Consensus 128 --d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~di~~~S~s 199 (386)
|++++++.++ +++++|++++|+|| ...++++|.++|+++|++||+|++|+.+... .... ..|++++|+|
T Consensus 158 ~~d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~i~~l~~~~~~~li~De~~~~g~~~~~~~~~~~~-~~di~~~s~s 234 (425)
T 3ecd_A 158 LIDYDQVEALAQQHKPSLIIAGFSAYP--RKLDFARFRAIADSVGAKLMVDMAHIAGVIAAGRHANPVE-HAHVVTSTTH 234 (425)
T ss_dssp SCCHHHHHHHHHHHCCSEEEEECSCCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSCCGGG-TCSEEEEESS
T ss_pred ccCHHHHHHHHhhcCCcEEEEccccCC--CcCCHHHHHHHHHHcCCEEEEECcChHhhhhcccccCchh-cCcEEEecCC
Confidence 8999999986 68999999999884 6778999999999999999999997544321 1122 3789999999
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHhhhhcCC-CCChhhHHHHH----hcC-CcHHHHHHHHHHHHHHHHHHHhhCCC
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGS-GLAPFDCWICL----RGV-KTMALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
|+++|+ |+|+++++++.+.+.+......... ........++. ... ..+....++..++.+.+.+.|.+..
T Consensus 235 K~l~g~---~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 310 (425)
T 3ecd_A 235 KTLRGP---RGGFVLTNDEEIAKKINSAVFPGLQGGPLMHVIAGKAVAFGEALTDDFKTYIDRVLANAQALGDVLKAGG- 310 (425)
T ss_dssp GGGCCC---SCEEEEESCHHHHHHHHHHHC-----CCCHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred cccCCC---CcEEEEeCCHHHHHHHHhhhCccccCCccHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhCC-
Confidence 999553 5799999876676655543332211 22221111111 112 2233445555666666666666531
Q ss_pred cceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
+ .+.. +...+.++++.+.. ......+.+.+...|+.++.+.. |....
T Consensus 311 --------~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------p~~~~---------- 358 (425)
T 3ecd_A 311 --------V------DLVT--GGTDNHLLLVDLRPKGLKGAQVEQALERAGITCNKNGI------PFDPE---------- 358 (425)
T ss_dssp --------C------EEGG--GSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEECCC------TTCSS----------
T ss_pred --------C------eecc--CCCCceEEEEEeCCCCCCHHHHHHHHHHcCCEeccccc------CCCCC----------
Confidence 1 1111 12346778887743 22345566666666777663321 10000
Q ss_pred hcCCCCCeEEEEec--------cCChHHHHHHHHHHHhc
Q 016612 353 ARGLTEDLVRISVG--------IEDVNDLISDLDKALRT 383 (386)
Q Consensus 353 ~~~~~~~~iRis~~--------~~~~~~~i~~l~~~l~~ 383 (386)
.....+.+|++++ .++++++++.|++++++
T Consensus 359 -~~~~~~~iRi~~~~~~~~~~~~e~i~~~~~~l~~~l~~ 396 (425)
T 3ecd_A 359 -KPTITSGIRLGTPAGTTRGFGAAEFREVGRLILEVFEA 396 (425)
T ss_dssp -CTTTCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCCccceeccchhheeccCCHHHHHHHHHHHHHHHhc
Confidence 0112467999953 36777777777777754
No 181
>3vp6_A Glutamate decarboxylase 1; catalytic loop SWAP, lyase; HET: LLP HLD; 2.10A {Homo sapiens} PDB: 2okj_A* 2okk_A*
Probab=99.88 E-value=1.3e-21 Score=189.18 Aligned_cols=222 Identities=11% Similarity=0.060 Sum_probs=155.7
Q ss_pred CCccccCC-CC-chHHHHHHHHHhhcCCC----ceEEeCcHHHHHH-HHHHhcC--------------CCCEEEecCCCC
Q 016612 45 GPYDYTRS-GN-PTRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLLG--------------TGEEIVAGDDLY 103 (386)
Q Consensus 45 ~~~~y~~~-g~-~~~~~l~~~l~~~~g~~----~~i~~~~gt~al~-~~~~~~~--------------~g~~Vlv~~~~~ 103 (386)
..+.|... +. .+.+++.+++++++|.+ ..+++++||+|+. ++.+..+ +++.|+++++.|
T Consensus 123 ~~~~~~~~p~~~~le~~~~~~l~~~~g~~~~~~~~~~t~ggt~a~~~al~~a~~~~~~~~~~~G~~~~~~~~v~~s~~~H 202 (511)
T 3vp6_A 123 NMFTYEIAPVFVLMEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSH 202 (511)
T ss_dssp CSSCTTTCHHHHHHHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTHHHHHCGGGSCCEEEEEETTSC
T ss_pred CCCCcccCchHHHHHHHHHHHHHHHhCCCCCCCceEECCchHHHHHHHHHHHHHHhhhhhhhcCcccCCCeEEEECCCch
Confidence 34455544 32 25677888899999876 4677888888764 4444332 567899999999
Q ss_pred CcHHHHHhhhcccCCc---EEEEeCCC-----CHHHHHhhhCCC------ceEEEEeCCCCCCcccccHHHHHHHHHHcC
Q 016612 104 GGTDRLLSRVTPKTGV---VVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 104 ~~~~~~~~~~~~~~g~---~~~~v~~~-----d~~~l~~~~~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~ 169 (386)
.++.. .++..|+ +++.++.+ |+++|+++++++ +++|++++++|++|.+.|+++|+++|++||
T Consensus 203 ~s~~~----~~~~~g~g~~~~~~v~~d~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~~~~G~vd~l~~I~~ia~~~~ 278 (511)
T 3vp6_A 203 YSIKK----AGAALGFGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYN 278 (511)
T ss_dssp THHHH----HHHHTTSCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCSSSCCBCCHHHHHHHHHHHT
T ss_pred HHHHH----HHHHcCCCCCcEEEeecCCCCccCHHHHHHHHHHHHhcCCCcEEEEEecCCCCCcccccHHHHHHHHHHcC
Confidence 98864 4445555 77777764 899999998754 889999999999999999999999999999
Q ss_pred CEEEEeCCCCCCCccCCC-------CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh--hh----------
Q 016612 170 ALLLVDNSIMSPVLSRPL-------ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ--NA---------- 230 (386)
Q Consensus 170 ~~li~D~a~~~~~~~~~~-------~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~--~~---------- 230 (386)
+++++|++|+.+....+. ..++|++++++||++++|.| +|+++++++.+.+...... +.
T Consensus 279 ~~lhvD~a~~~~~~~~~~~~~~~~g~~~aDsv~~~~hK~l~~p~g--~g~l~~~~~~~~~~~~~~~~~yl~~~~~~~~~~ 356 (511)
T 3vp6_A 279 LWLHVDAAWGGGLLMSRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQGCNQMHASYLFQQDKHYDVS 356 (511)
T ss_dssp CEEEEEETTGGGGGGCTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHHHHHCCCCTTTCCSSCSSCGG
T ss_pred CEEEEEccchhhHhhChhhhhhccCCccCCEEEECcccccCCCcC--eEEEEEeCHHHHHHHhccCCccccCcccccccc
Confidence 999999999877653221 12569999999999988776 6888888765544321100 00
Q ss_pred ---------cCCCCChhhHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHhhCC
Q 016612 231 ---------EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 231 ---------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
.+........++.+. +.+.+..+.++..++++.+.+.+++.+
T Consensus 357 ~~~~~~~~~~~r~~~al~~~~al~~~g~~gl~~~~~~~~~~a~~l~~~L~~~p 409 (511)
T 3vp6_A 357 YDTGDKAIQCGRHVDIFKFWLMWKAKGTVGFENQINKCLELAEYLYAKIKNRE 409 (511)
T ss_dssp GCCGGGSSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCT
T ss_pred cCccCCCCCCCCchHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 001112233333333 233455667777788888888887664
No 182
>3i4j_A Aminotransferase, class III; structural GENOMICS,NYSGXRC, target 11246C, deino radiodurans, pyridoxal phosphate, transfe PSI-2; 1.70A {Deinococcus radiodurans}
Probab=99.88 E-value=9.6e-23 Score=193.44 Aligned_cols=329 Identities=12% Similarity=0.071 Sum_probs=187.7
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDKA--DRALCFTSGMAALAA 85 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~ 85 (386)
+.+++..+ ..++|..+|.+.++...... ... .|... + .+.+.+++++++++++. ++.++++||++++..
T Consensus 30 ~~lD~~~~~~~~~lG~~~p~v~~a~~~~~~----~~~-~~~~~~~~~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~ 104 (430)
T 3i4j_A 30 RYLDGSSGALVANIGHGRAEVGERMAAQAA----RLP-FVHGSQFSSDVLEEYAGRLARFVGLPTFRFWAVSGGSEATES 104 (430)
T ss_dssp EEEETTHHHHTCTTCBCCHHHHHHHHHHHH----HCC-CCCTTTCEEHHHHHHHHHHHHHTTCTTCEEEEESSHHHHHHH
T ss_pred EEEECCCchhccccCCCCHHHHHHHHHHHH----hcc-cccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCcHHHHHHH
Confidence 35566533 46678766665543221111 111 23322 2 34789999999999865 467778888999874
Q ss_pred -HHHhc--------CCCCEEEecCCCCCcHHHHHhhhcccCC---------c--EEEEeCCC--------CHHHHHhhhC
Q 016612 86 -VTHLL--------GTGEEIVAGDDLYGGTDRLLSRVTPKTG---------V--VVKRVNTC--------DLDEVASAIG 137 (386)
Q Consensus 86 -~~~~~--------~~g~~Vlv~~~~~~~~~~~~~~~~~~~g---------~--~~~~v~~~--------d~~~l~~~~~ 137 (386)
+..++ .+|+.|++.+|.|+++............ . .+..++.. |+++|++.++
T Consensus 105 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~l~ 184 (430)
T 3i4j_A 105 AVKLARQYHVERGEPGRFKVITRVPSYHGASLGSLAASGMGARRELYTPLMRPEAWPKLPKPDPARNGAEDAEGLRALLE 184 (430)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTC-------------------------CGGGSCEECCCCTTSCHHHHHTHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCcEEEEEeCCcCCCCcccccccCccccccccCCcCCCCCceEcCCCcccchhhHHHHHHHHHHH
Confidence 43343 4578999999999876432111111000 0 22333433 3478888876
Q ss_pred ----CCceEEEEeCCCC-CCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCC-CCCccEEEeccccc
Q 016612 138 ----PWTKLVWVESPTN-PRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPL-ELGADIVMHSATKF 201 (386)
Q Consensus 138 ----~~~~~v~~~~~~n-ptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~-~~~~di~~~S~sK~ 201 (386)
+++++|+++.++| ++|.+.+ +++|.++|++||+++|+||+|+. +... ... ....|++ ++||.
T Consensus 185 ~~~~~~~~~vi~~p~~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~~~~~~g~~~~~~~~~~~~~di~--t~sK~ 262 (430)
T 3i4j_A 185 REGPETVAAFMAEPVVGASDAALAPAPGYYERVRDICDEAGIIFIADEVMSGMGRCGSPLALSRWSGVTPDIA--VLGKG 262 (430)
T ss_dssp HHCGGGEEEEEECSSCCGGGTTCCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTTCCCSEE--EECGG
T ss_pred hcCCCCEEEEEEcCcccCcCCcccCCHHHHHHHHHHHHHcCCEEEEechhhCCCcccchhhhhhhcCCCCcEE--EEccc
Confidence 5667788888888 8998776 99999999999999999999862 2211 111 2235665 57899
Q ss_pred cccCCC-ceEEEEEEcChhHHHHHHHh----hhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCc
Q 016612 202 IAGHSD-VMAGVLAVKGERLAKELYFL----QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRV 274 (386)
Q Consensus 202 ~~g~~g-~~~G~i~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~ 274 (386)
+++ | +|+|+++++ +++.+.+... ........++..+.++..+++.+. ...++..++.+.+.+.+++..
T Consensus 263 l~~--G~~r~G~~~~~-~~i~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~l~~~~-- 337 (430)
T 3i4j_A 263 LAA--GYAPLAGLLAA-PQVYETVMGGSGAFMHGFTYAGHPVSVAAGLSVLDIVEREDLTGAAKERGAQLLAGLQALQ-- 337 (430)
T ss_dssp GTT--TSSCCEEEEEC-HHHHHHHHHTTCBCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH--
T ss_pred ccC--CccccEEEEEC-HHHHHHHhccCCcccccCCCCCCHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH--
Confidence 964 7 899999986 5566655542 222334556666666555544221 123344444455555554321
Q ss_pred ceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH---------HhHHHHHhhcCcceeccCCCCccccccccccccCCC
Q 016612 275 KKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL---------ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHAS 345 (386)
Q Consensus 275 ~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~ 345 (386)
..++.. ...++.+.++++.+.+. ....++.+.+...|+.+.++....
T Consensus 338 --------~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~~~------------ 393 (430)
T 3i4j_A 338 --------ARFPQM----MQVRGTGLLLGVVLGDLATGQAFETPGIASRIGAAALKRGLITYPGSGAE------------ 393 (430)
T ss_dssp --------HHCTTE----EEEEEETTEEEEEEC------------CHHHHHHHHHHTTEECC------------------
T ss_pred --------HhCCCe----EEEEEEEEEEEEEeccccccCCCccHHHHHHHHHHHHhCCCEEEeccccc------------
Confidence 000111 11134567888887431 123567777777888777653200
Q ss_pred CCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 346 IPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 346 ~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+..++++||+++ .++++++++.|++++++.
T Consensus 394 --------~~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~~ 428 (430)
T 3i4j_A 394 --------PNGRGDHLLLGPPLSITAAEVDGLLALLAGALEDV 428 (430)
T ss_dssp -------------CEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 0223567999965 488888999999888753
No 183
>2z67_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine biosynthesis, seven-stranded BETE-strand, PYR 5'-phosphate; HET: PLP; 2.50A {Methanococcus maripaludis} SCOP: c.67.1.9
Probab=99.88 E-value=1e-21 Score=187.47 Aligned_cols=210 Identities=13% Similarity=0.126 Sum_probs=142.7
Q ss_pred hHHHHHHHHHhhcCCCc-eEEeCcHH-HHHH-HHHHhcC--CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC----
Q 016612 56 TRDALESLLAKLDKADR-ALCFTSGM-AALA-AVTHLLG--TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT---- 126 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~-~i~~~~gt-~al~-~~~~~~~--~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~---- 126 (386)
+.+++++++++++|.+. .+++++|| .++. ++.++.. +|+.|+++++.|+++. ..++..|++++.++.
T Consensus 134 ~~~~~~~~la~~~g~~~~~~~t~g~te~a~~~al~~~~~~~~~~~vi~~~~~h~s~~----~~~~~~G~~~~~v~~~~~~ 209 (456)
T 2z67_A 134 LTNKILESFFKQLGLNVHAIATPISTGMSISLCLSAARKKYGSNVVIYPYASHKSPI----KAVSFVGMNMRLVETVLDG 209 (456)
T ss_dssp HHHHHHHHHHHHTTCCCEEEEESSCHHHHHHHHHHHHHHHHCCCEEEEECCCCHHHH----HHHHHTTCEEEEECCEEET
T ss_pred HHHHHHHHHHHHcCCCCCEEEeCcHHHHHHHHHHHHHHHhcCCCEEEEECCCcHHHH----HHHHHcCCCceEEEEeccC
Confidence 56779999999999874 56666777 4544 4444333 7788999999998875 445568999888775
Q ss_pred ----CCHHHHHhhh-C----CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc---cC-C--CCCCc
Q 016612 127 ----CDLDEVASAI-G----PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL---SR-P--LELGA 191 (386)
Q Consensus 127 ----~d~~~l~~~~-~----~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~---~~-~--~~~~~ 191 (386)
.|++++++++ + .++.+|++++++||+|.+.|+++|.++|+++|+++++|++|+.... +. . ...++
T Consensus 210 ~~~~~d~~~l~~~i~~~~~~~~~~~vv~~~~nn~tG~i~~l~~I~~la~~~g~~v~vD~A~~~~~~g~~~~~~~~~~~~~ 289 (456)
T 2z67_A 210 DRVYVPVEDIENAIKKEIELGNRPCVLSTLTFFPPRNSDDIVEIAKICENYDIPHIINGAYAIQNNYYLEKLKKAFKYRV 289 (456)
T ss_dssp TEEECCHHHHHHHHHHHHHTTCCEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHTSCC
T ss_pred CCCCcCHHHHHHHHHHHhhCCCeEEEEEeCCCCCCCCcCCHHHHHHHHHHcCCcEEEECcchHHHHHhhHHHHHhhCCCC
Confidence 2899999998 4 4777888899999999999999999999999999999999874432 11 1 11178
Q ss_pred cEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHh
Q 016612 192 DIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGV--KTMALRVEKQQDNAQKIAEFLA 269 (386)
Q Consensus 192 di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~l~~~l~ 269 (386)
|++++|+||++.+|.| +|+++++++++.+.+................++.+..+ ..+....++..++++.+.+.|+
T Consensus 290 D~~~~s~hK~~~~p~g--~G~l~~~~~~~~~~l~~~~~g~~~~~~~~~~~aal~~l~~~~~~~~~~~~~~~~~~l~~~L~ 367 (456)
T 2z67_A 290 DAVVSSSDKNLLTPIG--GGLVYSTDAEFIKEISLSYPGRASATPVVNTLVSLLSMGSKNYLELVKNQKNSKKLLDELLN 367 (456)
T ss_dssp SEEEEEHHHHHCCCSS--CEEEEESCHHHHHHHHTTSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CEEEEcCCCCcCCCCC--eEEEEEcCHHHHhhcCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999877655 79999976666554432221111111122222222211 2233344555566666666665
Q ss_pred hC
Q 016612 270 SH 271 (386)
Q Consensus 270 ~~ 271 (386)
+.
T Consensus 368 ~~ 369 (456)
T 2z67_A 368 DL 369 (456)
T ss_dssp HH
T ss_pred hc
Confidence 43
No 184
>3n5m_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, csgid; 2.05A {Bacillus anthracis}
Probab=99.88 E-value=3.2e-22 Score=191.10 Aligned_cols=326 Identities=16% Similarity=0.151 Sum_probs=196.3
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcCCC-ceEEeCcHHHHHHHH-
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDKAD-RALCFTSGMAALAAV- 86 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g~~-~~i~~~~gt~al~~~- 86 (386)
+.+++..+ ..++|..+|.+.++...... ...+ +... ..+.+.+++++++++++.+ ++++++||++|+..+
T Consensus 50 ~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~----~~~~-~~~~~~~~~~~~la~~l~~~~~~~~~v~~~~ggseA~~~al 124 (452)
T 3n5m_A 50 RYLDGMSGLWCVNSGYGRKELAEAAYKQLQ----TLSY-FPMSQSHEPAIKLAEKLNEWLGGEYVIFFSNSGSEANETAF 124 (452)
T ss_dssp EEEETTHHHHTCTTCBCCHHHHHHHHHHHT----TCCC-CCTTSEEHHHHHHHHHHHHHHTSCEEEEEESSHHHHHHHHH
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHH----hcCC-cccccCCHHHHHHHHHHHHhCCCCceEEEeCchHHHHHHHH
Confidence 35666522 36788776666554222111 1111 1112 2357899999999998765 577778889998744
Q ss_pred HHhc-----C---CCCEEEecCCCCCcHHHHHhhhc---------ccCCcEEEEeCC--------CC---------HHHH
Q 016612 87 THLL-----G---TGEEIVAGDDLYGGTDRLLSRVT---------PKTGVVVKRVNT--------CD---------LDEV 132 (386)
Q Consensus 87 ~~~~-----~---~g~~Vlv~~~~~~~~~~~~~~~~---------~~~g~~~~~v~~--------~d---------~~~l 132 (386)
..++ + ++++|++.++.|+++........ ......+..++. .| +++|
T Consensus 125 ~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 204 (452)
T 3n5m_A 125 KIARQYYAQKGEPHRYKFMSRYRGYHGNTMATMAATGQAQRRYQYEPFASGFLHVTPPDCYRMPGIERENIYDVECVKEV 204 (452)
T ss_dssp HHHHHHHHTTTCTTCCEEEEETTCCCCSSHHHHHSCCCGGGTTTTCCCCSCEEEECCCCTTTSTTTTTSCGGGCHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHHhcCCchhhccccCCCCCCCeEeCCCccccCccCCchhhHHHHHHHHH
Confidence 3343 4 78999999999987642221111 011112333332 23 8899
Q ss_pred HhhhC----CCceEEEEeCC-CCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEec
Q 016612 133 ASAIG----PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHS 197 (386)
Q Consensus 133 ~~~~~----~~~~~v~~~~~-~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S 197 (386)
++.++ +++++|+++++ +| +|.+.+ +++|.++|++||+++|+||+|+. +... .......|++ +
T Consensus 205 e~~l~~~~~~~~~~vi~ep~~~n-~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~~~~~~~~~~di~--t 281 (452)
T 3n5m_A 205 DRVMTWELSETIAAFIMEPIITG-GGILMAPQDYMKAVHETCQKHGALLISDEVICGFGRTGKAFGFMNYDVKPDII--T 281 (452)
T ss_dssp HHHHHHHCGGGEEEEEECSSBTT-TTCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSGGGGTTCCCSEE--E
T ss_pred HHHHHhcCCCCEEEEEEccccCC-CCeeeCCHHHHHHHHHHHHHcCCEEEEecchhCCCcccccchhhhcCCCCCEE--e
Confidence 98886 67889999998 89 998876 99999999999999999999862 2211 1112345666 5
Q ss_pred cccccccCCC-ceEEEEEEcChhHHHHHHH---hh---hhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHH
Q 016612 198 ATKFIAGHSD-VMAGVLAVKGERLAKELYF---LQ---NAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL 268 (386)
Q Consensus 198 ~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~---~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l 268 (386)
+||.+++ | +++|+++++ +++.+.+.. .. .....+.++..++++...++.+.. ..++..++.+.+.+.+
T Consensus 282 ~sK~l~~--G~~~ig~~~~~-~~i~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L 358 (452)
T 3n5m_A 282 MAKGITS--AYLPLSATAVK-REIYEAFKGKGEYEFFRHINTFGGNPAACALALKNLEIIENENLIERSAQMGSLLLEQL 358 (452)
T ss_dssp ECGGGGT--TSSCCEEEEEE-HHHHGGGCSSSTTCSCCCCCSSTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred ecccccC--CCcceEEEEEC-HHHHHHHhhccCCCCccccCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 7899954 6 889999986 555554321 11 122334566666665555543211 2334444455555555
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC---------HHhHHHHHhhcCcceeccCCCCccccccccc
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS---------LALSKHVVETTKYFSITVSFGSVKSLISMPC 339 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~---------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~ 339 (386)
++.. ..++.. ...++.+.++++.+.. .....++.+.+...|+.+.++..+.
T Consensus 359 ~~~~----------~~~~~~----~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~~~~------ 418 (452)
T 3n5m_A 359 KEEI----------GEHPLV----GDIRGKGLLVGIELVNDKETKEPIDNDKIASVVNACKEKGLIIGRNGMTT------ 418 (452)
T ss_dssp HHHH----------TTCTTE----EEEEESSSCEEEEEEEETTTTEECCHHHHHHHHHHHHHTTEECEECTTSS------
T ss_pred HHHH----------hcCCCe----EEEEEEEEEEEEEEecCCcccCCCCHHHHHHHHHHHHHCCcEEeecCccc------
Confidence 4320 111111 1113456777777621 2234567777777788776654311
Q ss_pred cccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 340 FMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
+..++++||+++ .++++++++.|++++++
T Consensus 419 ---------------~~~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 451 (452)
T 3n5m_A 419 ---------------AGYNNILTLAPPLVISSEEIAFVIGTLKTAMER 451 (452)
T ss_dssp ---------------TTCCCEEEECCCTTCCHHHHHHHHHHHHHHHTT
T ss_pred ---------------CCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 012577999865 37888888888888765
No 185
>3gbx_A Serine hydroxymethyltransferase; structural genomics, IDP01011, serine hydroxymethyltransfera salmonella typhimurium.; HET: MSE; 1.80A {Salmonella typhimurium} SCOP: c.67.1.4 PDB: 1dfo_A* 3g8m_A* 1eqb_A*
Probab=99.88 E-value=1.4e-21 Score=184.58 Aligned_cols=289 Identities=20% Similarity=0.149 Sum_probs=173.5
Q ss_pred hHHHHHHHHHhhcCCCc-eEEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhh-hcccCCcEEEEeCC-----C
Q 016612 56 TRDALESLLAKLDKADR-ALCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNT-----C 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~-~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~-~~~~~g~~~~~v~~-----~ 127 (386)
..+.+++++++++|.+. .+++++|++++. ++.+++++||+|++++|.|+++...... .....+...+.++. .
T Consensus 77 ~~~~~~~~la~~~~~~~~~v~~~sGs~a~~~a~~~~~~~gd~v~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 156 (420)
T 3gbx_A 77 VEQLAIDRAKELFGADYANVQPHSGSQANFAVYTALLQPGDTVLGMNLAQGGHLTHGSPVNFSGKLYNIVPYGIDESGKI 156 (420)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEEEEC------------CHHHHSEEEEEEECTTCSC
T ss_pred HHHHHHHHHHHHhCCCCceeEecCcHHHHHHHHHHhcCCCCEEEecchhhcceeccchhhhhcccceeEEeccCCccCCc
Confidence 34556688999999884 466899998886 5567899999999999999874311111 11112223333321 4
Q ss_pred CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCc-----cCCCCCCccEEEeccccc
Q 016612 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVL-----SRPLELGADIVMHSATKF 201 (386)
Q Consensus 128 d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~-----~~~~~~~~di~~~S~sK~ 201 (386)
|++++++++++ ++++|++++|+|| ...++++|.++|++||+++|+||+|+.+.. ..... ..|++++|+||+
T Consensus 157 d~~~l~~~i~~~~~~~v~~~~~~~~--~~~~l~~l~~l~~~~~~~li~De~~~~~~~~~~~~~~~~~-~~di~~~s~sK~ 233 (420)
T 3gbx_A 157 DYDEMAKLAKEHKPKMIIGGFSAYS--GVVDWAKMREIADSIGAYLFVDMAHVAGLIAAGVYPNPVP-HAHVVTTTTHKT 233 (420)
T ss_dssp CHHHHHHHHHHHCCSEEEECCTTCC--SCCCHHHHHHHHHHTTCEEEEECTTTHHHHHTTSSCCSTT-TSSEEEEESSGG
T ss_pred CHHHHHHHHHhcCCeEEEEecCccC--CccCHHHHHHHHHHcCCEEEEECCcchhceecccCCcccc-cCCEEEeecccC
Confidence 89999999875 6999999999886 478999999999999999999999864432 22222 489999999999
Q ss_pred cccCCCceEEEEEEcC--hhHHHHHHHhhhhcCC-CCChhhHHH---HH-hcC-CcHHHHHHHHHHHHHHHHHHHhhCCC
Q 016612 202 IAGHSDVMAGVLAVKG--ERLAKELYFLQNAEGS-GLAPFDCWI---CL-RGV-KTMALRVEKQQDNAQKIAEFLASHPR 273 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~---~~-~~~-~~~~~~~~~~~~~~~~l~~~l~~~~~ 273 (386)
++|+. +|++++++ +.+.+.+......... ........+ .. ... ..+....++..++.+.+.+.|++..
T Consensus 234 ~~g~~---gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~g- 309 (420)
T 3gbx_A 234 LAGPR---GGLILAKGGDEELYKKLNSAVFPSAQGGPLMHVIAGKAVALKEAMEPEFKVYQQQVAKNAKAMVEVFLNRG- 309 (420)
T ss_dssp GCSCS---CEEEEESSCCHHHHHHHHHHHC----CCCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHTT-
T ss_pred CCCCC---ceEEEEcCCcHHHHHHhhhhcCCCCCCCcchhHHHHHHHHHHHHHhHhHHHHHHHHHHHHHHHHHHHHhcC-
Confidence 97654 69999886 3565555443332211 111211111 11 222 2234455666677777777776531
Q ss_pred cceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHH
Q 016612 274 VKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQ 352 (386)
Q Consensus 274 ~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~ 352 (386)
+ .+.. +...++++++.+.. ......+.+.+...|+.+.++.. |.....
T Consensus 310 --------~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~v~~~~~------~~~~~~--------- 358 (420)
T 3gbx_A 310 --------Y------KVVS--GGTENHLFLLDLVDKNLTGKEADAALGRANITVNKNSV------PNDPKS--------- 358 (420)
T ss_dssp --------C------EEGG--GSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECEEECC------TTCSSC---------
T ss_pred --------C------eecc--CCCCCeEEEEEcCCCCCCHHHHHHHHHHCCcEeccccC------CCCccc---------
Confidence 1 1111 11246677877643 22345555666666776554211 100000
Q ss_pred hcCCCCCeEEEEec--------cCChHHHHHHHHHHHhcC
Q 016612 353 ARGLTEDLVRISVG--------IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 353 ~~~~~~~~iRis~~--------~~~~~~~i~~l~~~l~~~ 384 (386)
...+..+|++++ .++++++++.|++++++.
T Consensus 359 --~~~~~~iRi~~~~~~~~~~~~~~i~~~~~~l~~~l~~~ 396 (420)
T 3gbx_A 359 --PFVTSGIRIGSPAVTRRGFKEAEVKELAGWMCDVLDNI 396 (420)
T ss_dssp --TTTCSEEEEECHHHHHTTCCHHHHHHHHHHHHHHHHTT
T ss_pred --cCCCcceEEecchhcccCCCHHHHHHHHHHHHHHHhCc
Confidence 012345999985 266777777777777653
No 186
>1w23_A Phosphoserine aminotransferase; pyridoxal-5'-phosphate; HET: PGE PLP EPE; 1.08A {Bacillus alcalophilus} SCOP: c.67.1.4 PDB: 2bhx_A* 2bi1_A* 2bi2_A* 2bi3_A* 2bi5_A* 2bi9_A* 2bia_A* 2bie_A* 2big_A*
Probab=99.88 E-value=9.7e-23 Score=188.69 Aligned_cols=273 Identities=12% Similarity=0.070 Sum_probs=172.4
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCcH-HHHHHH-HHHhcCC---CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKAD---RALCFTSG-MAALAA-VTHLLGT---GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~g-t~al~~-~~~~~~~---g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
..+++++++++++|.+ +.++++++ ++|+.+ +..++.+ ||.|+++.+.|... ..++..| +++.++.+
T Consensus 49 ~~~~l~~~la~~~g~~~~~~v~~~~g~gt~al~~~~~~l~~~~~~g~~vi~~~~~~~~~-----~~~~~~g-~~~~v~~~ 122 (360)
T 1w23_A 49 VHEQAQNLLRELLQIPNDYQILFLQGGASLQFTMLPMNLLTKGTIGNYVLTGSWSEKAL-----KEAKLLG-ETHIAAST 122 (360)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHCCTTCEEEEEECSHHHHHHH-----HHHHTTS-EEEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCCceEEEECCcchHHHHHHHHHhcCCCCcccEEEecchhHHHH-----HHHHHhC-CeEEeecc
Confidence 6889999999999986 34455555 788874 5566654 66677776666442 2345678 88887742
Q ss_pred ------CHHHHHh-hhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEecccc
Q 016612 128 ------DLDEVAS-AIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATK 200 (386)
Q Consensus 128 ------d~~~l~~-~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK 200 (386)
|++++++ ++++++++|++++|+||||.+.+ +| ++++|+++|+|++|+.+....... ..|++++|+||
T Consensus 123 ~~~~~~d~~~l~~~~i~~~~k~v~~~~~~nptG~~~~--~i---~~~~~~~li~D~a~~~~~~~~~~~-~~di~~~s~sK 196 (360)
T 1w23_A 123 KANSYQSIPDFSEFQLNENDAYLHITSNNTIYGTQYQ--NF---PEINHAPLIADMSSDILSRPLKVN-QFGMIYAGAQK 196 (360)
T ss_dssp GGGTSCSCCCGGGCCCCTTEEEEEEESEETTTTEECS--SC---CCCCSSCEEEECTTTTTSSCCCGG-GCSEEEEETTT
T ss_pred cccCcCCccchHhhccCCCCCEEEEeCCCCCcceecc--cc---cccCCceEEEechhhcCCCCcCcc-cCCEEEEEccc
Confidence 6788888 88889999999999999999987 33 338999999999998765432221 23899999999
Q ss_pred ccccCCCceEEEEEEcChhHHHHHHHhh-----------hhcC-CCCChhhHHHHHhcCCc------HHHHHHHHHHHHH
Q 016612 201 FIAGHSDVMAGVLAVKGERLAKELYFLQ-----------NAEG-SGLAPFDCWICLRGVKT------MALRVEKQQDNAQ 262 (386)
Q Consensus 201 ~~~g~~g~~~G~i~~~~~~~~~~~~~~~-----------~~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~ 262 (386)
+++ ++| +|+++++++ +.+.+.... .... ...+....+++..+++. +....++..++.+
T Consensus 197 ~~~-~~G--~G~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~~~~~~~~~~~ 272 (360)
T 1w23_A 197 NLG-PSG--VTVVIVKKD-LLNTKVEQVPTMLQYATHIKSDSLYNTPPTFSIYMLRNVLDWIKDLGGAEAIAKQNEEKAK 272 (360)
T ss_dssp TTS-CTT--CEEEEEEHH-HHCSCCTTCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred ccC-CCC--cEEEEEcHH-HHhhcccCCcchhhhhhhhhccCCCCCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 994 666 699988754 333221111 0011 12233333333333322 2334455556666
Q ss_pred HHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCC-CceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccc
Q 016612 263 KIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGA-GSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFM 341 (386)
Q Consensus 263 ~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~ 341 (386)
.+.+.+++.+. + ..... .+... +.++++.+++.....++.+.+...|+.+.+|..
T Consensus 273 ~l~~~L~~~~~--------~-----~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gi~~~~~~~---------- 328 (360)
T 1w23_A 273 IIYDTIDESNG--------F-----YVGHA-EKGSRSLMNVTFNLRNEELNQQFLAKAKEQGFVGLNGHR---------- 328 (360)
T ss_dssp HHHHHHHTTTT--------S-----SEESS-CGGGBCSSEEEEECSSHHHHHHHHHHHHHTTEESCBCCT----------
T ss_pred HHHHHHHHccC--------c-----ccccC-CchhccCcEEEEEcCCCccHHHHHHHHHHCCeeeecCCC----------
Confidence 66666665431 1 00000 01112 348888887655567788888778887665442
Q ss_pred cCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 342 SHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 342 ~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
.++++|+|++. ++++++++.|++.+++
T Consensus 329 ---------------~~~~iRis~~~~~~~~~i~~~~~~l~~~~~~ 359 (360)
T 1w23_A 329 ---------------SVGGCRASIYNAVPIDACIALRELMIQFKEN 359 (360)
T ss_dssp ---------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHH
T ss_pred ---------------CCCeEEEEecCCCCHHHHHHHHHHHHHHHhh
Confidence 13569999974 5566666666666554
No 187
>2fyf_A PSAT, phosphoserine aminotransferase; PLP-dependent enzyme, dimer, structural genomics; HET: PLP; 1.50A {Mycobacterium tuberculosis} PDB: 3vom_A*
Probab=99.88 E-value=3e-22 Score=188.07 Aligned_cols=280 Identities=11% Similarity=0.028 Sum_probs=168.3
Q ss_pred hHHHHHHHHHhhcCCC---ceEE-eCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCC
Q 016612 56 TRDALESLLAKLDKAD---RALC-FTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCD 128 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~-~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d 128 (386)
..+++++++++++|.+ +.++ +++|++++.+ +.+++++| .+++..+.|.... ...+... |.+++.++.++
T Consensus 79 ~~~~~~~~la~~~g~~~~~~i~~~t~g~t~al~~~~~~l~~~g-v~~v~~~~~~~~~---~~~~~~~~~g~~~~~v~~~~ 154 (398)
T 2fyf_A 79 LVGRVRSGLAELFSLPDGYEVILGNGGATAFWDAAAFGLIDKR-SLHLTYGEFSAKF---ASAVSKNPFVGEPIIITSDP 154 (398)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEETCHHHHHHHHHHHTCSSC-EEEEECSHHHHHH---HHHHHHCTTSCCCEEEECCT
T ss_pred HHHHHHHHHHHHhCCCCCceEEEeCCchhHHHHHHHHHhcCCC-eEEEeCCHHHHHH---HHHHHHhCCCCceEEEecCC
Confidence 5788999999999986 3444 5677799874 55577887 2333434442211 1122223 66666666531
Q ss_pred HHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccccCCCc
Q 016612 129 LDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIAGHSDV 208 (386)
Q Consensus 129 ~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~g~~g~ 208 (386)
-......+++++++|++++++||||.+.|+++|.++ +|+++|+|++|+.+....... +.|++++|+||++++++|
T Consensus 155 g~~~~~~i~~~~~~v~~~~~~nptG~~~~~~~i~~~---~~~~vivD~a~~~~~~~~~~~-~~di~~~s~sK~~~~~gg- 229 (398)
T 2fyf_A 155 GSAPEPQTDPSVDVIAWAHNETSTGVAVAVRRPEGS---DDALVVIDATSGAGGLPVDIA-ETDAYYFAPQKNFASDGG- 229 (398)
T ss_dssp TCCCCCCCCTTCSEEEEESEETTTTEECCCCCCTTC---C-CEEEEECTTTTTTSCCCGG-GCSEEEECTTSTTCSCSS-
T ss_pred CCCCCccccCCCCEEEEeCcCCCcceecchHHhhhh---cCCeEEEEeccccCCcccCcc-cCcEEEEecCcccCCCCc-
Confidence 000111256789999999999999999999888887 899999999998766432222 479999999999966533
Q ss_pred eEEEEEEcChhHHHHHHHhh----------------h----hcC-CCCChhhHHHHHhcCCc------HHHHHHHHHHHH
Q 016612 209 MAGVLAVKGERLAKELYFLQ----------------N----AEG-SGLAPFDCWICLRGVKT------MALRVEKQQDNA 261 (386)
Q Consensus 209 ~~G~i~~~~~~~~~~~~~~~----------------~----~~~-~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~ 261 (386)
+|+++++++ +.+.+.... . ... ...+......+..+++. +....++..++.
T Consensus 230 -~g~l~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~~~~~~~a~~~al~~~~~~g~~~~~~~~~~~~~ 307 (398)
T 2fyf_A 230 -LWLAIMSPA-ALSRIEAIAATGRWVPDFLSLPIAVENSLKNQTYNTPAIATLALLAEQIDWLVGNGGLDWAVKRTADSS 307 (398)
T ss_dssp -EEEEEECHH-HHHHHHHHHHTTCCCCGGGCHHHHHHHHTTTCCSSCCCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHH
T ss_pred -eEEEEECHH-HHHHhhcccccCCCCCcEEehHHHhhhcccCCCCCCCCHHHHHHHHHHHHHHHHccCHHHHHHHHHHHH
Confidence 799888754 444332110 0 011 12222323333333322 333445555666
Q ss_pred HHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCCHHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 262 QKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 262 ~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
+.+.+.|++.+. ..++...+..+++ ++++.++......++.+.+...|+.++.|..
T Consensus 308 ~~l~~~L~~~~g--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gI~v~~g~~--------- 364 (398)
T 2fyf_A 308 QRLYSWAQERPY--------------TTPFVTDPGLRSQVVGTIDFVDDVDAGTVAKILRANGIVDTEPYR--------- 364 (398)
T ss_dssp HHHHHHHHHSTT--------------EEESCCSGGGBCSSEEEEEECTTSCHHHHHHHHHHTTCBCCSCCT---------
T ss_pred HHHHHHHHHcCC--------------ceeccCChhhcCCcEEEEECCCCCCHHHHHHHHHHCCcEEecCcc---------
Confidence 666666665431 1111100111244 8888885433456777777777887765421
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
..+++++|||++. ++++++++.|++++++
T Consensus 365 --------------~~~~~~iRis~~~~~t~e~i~~~~~~l~~~l~~ 397 (398)
T 2fyf_A 365 --------------KLGRNQLRVAMFPAVEPDDVSALTECVDWVVER 397 (398)
T ss_dssp --------------TTCSSEEEEECCTTSCHHHHHHHHHHHHHHHHT
T ss_pred --------------cCCCCEEEEEecCCCCHHHHHHHHHHHHHHHHh
Confidence 1125679999973 6777777777777764
No 188
>1wyu_B Glycine dehydrogenase subunit 2 (P-protein); alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_B* 1wyv_B*
Probab=99.88 E-value=3e-22 Score=192.22 Aligned_cols=158 Identities=20% Similarity=0.289 Sum_probs=128.6
Q ss_pred hHHHHHHHHHhhcCCCceEEe-CcHHHHHHH-HHHh----cCCCC-----EEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 56 TRDALESLLAKLDKADRALCF-TSGMAALAA-VTHL----LGTGE-----EIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~-~~gt~al~~-~~~~----~~~g~-----~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
+++++++++++++|.+..+++ ++|++++.+ ++.+ .++|| +|+++++.|+++. ..++..|.+++.+
T Consensus 108 l~~~l~~~la~~~g~~~~~~~~~ggt~a~~~al~~~~~~~~~~Gd~~~r~~Vlv~~~~h~~~~----~~~~~~G~~vv~v 183 (474)
T 1wyu_B 108 LMWELGEYLKALTGMDAITLEPAAGAHGELTGILIIRAYHEDRGEGRTRRVVLVPDSAHGSNP----ATASMAGYQVREI 183 (474)
T ss_dssp HHHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHHHHHHHTTCTTTCCEEEEETTSCTHHH----HHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHHCCCceeecChHHHHHHHHHHHHHHHHHHhcCCccCCCEEEEeCCcChhhH----HHHHHCCCEEEEe
Confidence 688999999999999865544 667788753 3332 46887 9999999998886 4456789999999
Q ss_pred CCC-----CHHHHHhhhCCCceEEEEeCCCCCCccc-ccHHHHHHHHHHcCCEEEEeCCCCCCCc--cCCCCCCccEEEe
Q 016612 125 NTC-----DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVL--SRPLELGADIVMH 196 (386)
Q Consensus 125 ~~~-----d~~~l~~~~~~~~~~v~~~~~~nptG~~-~~l~~i~~la~~~~~~li~D~a~~~~~~--~~~~~~~~di~~~ 196 (386)
+.+ |+++|++++++++++|++++| ||+|.+ .++++|.++|+++|+++|+|++|+.+.. .++...+.|++++
T Consensus 184 ~~~~~~~~d~~~L~~~i~~~t~~v~~~~p-n~~G~~~~~l~~i~~l~~~~g~~li~Dea~~~~~~g~~~~~~~g~di~~~ 262 (474)
T 1wyu_B 184 PSGPEGEVDLEALKRELGPHVAALMLTNP-NTLGLFERRILEISRLCKEAGVQLYYDGANLNAIMGWARPGDMGFDVVHL 262 (474)
T ss_dssp CBCTTSSBCHHHHHHHCSTTEEEEEECSS-CTTSCCCTTHHHHHHHHHHHTCEEEEEGGGGGGTTTTCCHHHHTCSEEEC
T ss_pred cCCCCCCcCHHHHHHhhCCCceEEEEECC-CCCcccCCCHHHHHHHHHHcCCEEEEeCchhhhhccCCCcccCCCcEEEE
Confidence 875 899999999999999999998 689998 6999999999999999999999975543 1233457899999
Q ss_pred ccccccccCC---CceEEEEEEcCh
Q 016612 197 SATKFIAGHS---DVMAGVLAVKGE 218 (386)
Q Consensus 197 S~sK~~~g~~---g~~~G~i~~~~~ 218 (386)
|+||++++|. |+++|+++++++
T Consensus 263 s~~K~~~~p~g~gG~~~G~~~~~~~ 287 (474)
T 1wyu_B 263 NLHKTFTVPHGGGGPGSGPVGVKAH 287 (474)
T ss_dssp CTTTTTCCCCTTSCCCCCCEEECGG
T ss_pred eCccccccCCCCCCCCeEEEEEcHH
Confidence 9999997663 357899999865
No 189
>1s0a_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; fold type I, subclass II, homodimer; HET: LLP; 1.71A {Escherichia coli} SCOP: c.67.1.4 PDB: 1qj5_A* 1mlz_A* 1qj3_A* 1mly_A* 1s06_A* 1s08_A* 1s09_A* 1s07_A* 1mgv_A* 1dty_A*
Probab=99.88 E-value=5.8e-22 Score=187.99 Aligned_cols=282 Identities=12% Similarity=0.069 Sum_probs=174.2
Q ss_pred CchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHHH-h---cC----CCCEEEecCCCCCcHHHHHhhhcc--------
Q 016612 54 NPTRDALESLLAKLDK--ADRALCFTSGMAALAAVTH-L---LG----TGEEIVAGDDLYGGTDRLLSRVTP-------- 115 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~~-~---~~----~g~~Vlv~~~~~~~~~~~~~~~~~-------- 115 (386)
.+...++++.++++++ .++.+++++|++|+..++. + .+ |||+|++.+|.|+++.........
T Consensus 85 ~~~~~~l~~~la~~~~~~~~~v~~~~ggtea~~~ai~~~~~~~~~~g~~~~~vi~~~~~yh~~~~~~~~~~~~~~~~~~~ 164 (429)
T 1s0a_A 85 HAPAIELCRKLVAMTPQPLECVFLADSGSVAVEVAMKMALQYWQAKGEARQRFLTFRNGYHGDTFGAMSVCDPDNSMHSL 164 (429)
T ss_dssp CHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTCCCCSSHHHHTTSCTTTTTGGG
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHHHHHHHHHHhcccCCCCCeEEEECCCCCCCchhhhhhcCCchhhccc
Confidence 3467889999999995 4467777888899874433 2 22 689999999998875322211111
Q ss_pred ----cCCcEEEEeCC---------CCHHHHHhhhC---CCceEEEEeCC-CCCCccccc----HHHHHHHHHHcCCEEEE
Q 016612 116 ----KTGVVVKRVNT---------CDLDEVASAIG---PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 116 ----~~g~~~~~v~~---------~d~~~l~~~~~---~~~~~v~~~~~-~nptG~~~~----l~~i~~la~~~~~~li~ 174 (386)
..+...+.++. .|+++++++++ +++++|+++++ +||||.+.+ +++|.++|+++|+++|+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~vi~~p~~~n~tG~~~~~~~~l~~i~~l~~~~~~~li~ 244 (429)
T 1s0a_A 165 WKGYLPENLFAPAPQSRMDGEWDERDMVGFARLMAAHRHEIAAVIIEPIVQGAGGMRMYHPEWLKRIRKICDREGILLIA 244 (429)
T ss_dssp GTTTSCCCEEECCCCSBC-CCCCGGGGHHHHHHHHHHTTTEEEEEECSSEECTTTCEEBCTHHHHHHHHHHHHHTCEEEE
T ss_pred ccCCCCCceEeCCCcccccccchHHHHHHHHHHHHhCCCCEEEEEEeecccCCCCcccCCHHHHHHHHHHHHHcCCEEEE
Confidence 11345554441 37889988886 57778887777 899998776 99999999999999999
Q ss_pred eCCCC-CCCcc-----CCCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHhh-----hhcCCCCChhhHHH
Q 016612 175 DNSIM-SPVLS-----RPLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQ-----NAEGSGLAPFDCWI 242 (386)
Q Consensus 175 D~a~~-~~~~~-----~~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~ 242 (386)
||+|+ .+... +......|++ |+||++++ | +++|++++++ ++.+.+.... .......++..+.+
T Consensus 245 De~~~~~g~~g~~~~~~~~~~~~d~~--t~sK~l~~--G~~~iG~~~~~~-~~~~~l~~~~~~~~~~~~t~~~n~~~~~a 319 (429)
T 1s0a_A 245 DEIATGFGRTGKLFACEHAEIAPDIL--CLGKALTG--GTMTLSATLTTR-EVAETISNGEAGCFMHGPTFMGNPLACAA 319 (429)
T ss_dssp ECTTTTTTTTSSSSGGGGGTCCCSEE--EECGGGGT--SSSCCEEEEECH-HHHHHHHTSTTSSCSCCCTTTTCHHHHHH
T ss_pred eehhhCCcccchHHHhhhcCCCCCEE--EecccccC--CCccceEEEeCH-HHHHHhhcCCCcccccCCCCCCCHHHHHH
Confidence 99997 32211 1122345766 67899864 6 7899999874 5555444321 11122345555555
Q ss_pred HHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcC
Q 016612 243 CLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTK 320 (386)
Q Consensus 243 ~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 320 (386)
+..+++.+. ...++..++.+.+.+.+++.. .+++... .++.+.++++.+........+.+.+.
T Consensus 320 ~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----------~~~~~~~----~~~~g~~~~~~~~~~~~~~~l~~~l~ 384 (429)
T 1s0a_A 320 ANASLAILESGDWQQQVADIEVQLREQLAPAR-----------DAEMVAD----VRVLGAIGVVETTHPVNMAALQKFFV 384 (429)
T ss_dssp HHHHHHHHHTCHHHHHHHHHHHHHHHHHGGGG-----------GCTTEEE----EEEETTEEEEEESSCBCHHHHHHHHH
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHh-----------cCCCEEE----EEEeeEEEEEEECCcccHHHHHHHHH
Confidence 544443221 122334444445555554321 0111111 12346788888754223556667666
Q ss_pred cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhc
Q 016612 321 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRT 383 (386)
Q Consensus 321 ~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~ 383 (386)
..|+.++++ .+++||+++. ++++++++.|++++++
T Consensus 385 ~~Gi~v~~~----------------------------~~~iRis~~~~~t~e~i~~~~~~l~~~~~~ 423 (429)
T 1s0a_A 385 EQGVWIRPF----------------------------GKLIYLMPPYIILPQQLQRLTAAVNRAVQD 423 (429)
T ss_dssp HTTEECCCB----------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHTSS
T ss_pred HCCCEEecc----------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHh
Confidence 678865531 2459999653 7777777777777654
No 190
>2x3l_A ORN/Lys/Arg decarboxylase family protein; lyase; HET: LLP; 2.00A {Staphylococcus aureus}
Probab=99.88 E-value=7.8e-22 Score=187.63 Aligned_cols=272 Identities=11% Similarity=0.007 Sum_probs=168.5
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC--C--
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--C-- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~-- 127 (386)
.+...++++++++ +|.++.+++++|+ +++. ++.+++++||+|++++++|.++...+ ...|.+++.++. +
T Consensus 56 ~~~~~~~~~~la~-~g~~~~v~~~~G~t~a~~~~~~a~~~~gd~Vlv~~~~h~s~~~~~----~~~G~~~~~v~~~~~~~ 130 (446)
T 2x3l_A 56 EEVILKSMKQVEK-HSDYDGYFLVNGTTSGILSVIQSFSQKKGDILMARNVHKSVLHAL----DISQQEGHFIETHQSPL 130 (446)
T ss_dssp SSHHHHHHHHHCS-CTTEEEEEESSHHHHHHHHHHHTTTTSSSCEEECTTCCHHHHHHH----HHHTCCEEECEEEECTT
T ss_pred chHHHHHHHHHHh-cCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEEecCccHHHHHHH----HHcCCeEEEEeCeeccc
Confidence 3468899999999 9988766666665 8887 55667899999999999999887544 346777777665 2
Q ss_pred -------CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-c----cCCCCCCccEEE
Q 016612 128 -------DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-L----SRPLELGADIVM 195 (386)
Q Consensus 128 -------d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-~----~~~~~~~~di~~ 195 (386)
|++++ +.+++++|++++ .|++|.+.|+++|.++|+++|+++|+|++|+... + .+....++|+++
T Consensus 131 ~~~~~~~d~~~l---~~~~~~~v~~~~-~n~~G~~~~l~~I~~l~~~~~~~livDea~~~~~~f~~~~~~~~~~g~Di~~ 206 (446)
T 2x3l_A 131 TNHYNKVNLSRL---NNDGHKLVVLTY-PNYYGETFNVEEVIKSLHQLNIPVLIDEAHGAHFGLQGFPDSTLNYQADYVV 206 (446)
T ss_dssp TSSEEEEEC----------CCEEEEES-SCTTSCCCCHHHHHHHHHHTTCCEEEECTTCTTTTSTTSCCCGGGGTCSEEE
T ss_pred cCcCCCCCHHHH---cCCCceEEEEEC-CCCCeEecCHHHHHHHHHhcCCeEEEcchhhhhhccCCCCCChHHcCCCEEE
Confidence 34555 457899999999 5669999999999999999999999999987511 1 122334789999
Q ss_pred eccccccccCCCceEEEEEEcChhHH-HHHHHhhh-hcCCCCChhhHHHHHhcCCcHHHH-HHHHHHHHHHHHHHHhhCC
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLA-KELYFLQN-AEGSGLAPFDCWICLRGVKTMALR-VEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~~~l~~~~ 272 (386)
.|+||+++++.| +|+++++++.+. ..+..... ......+....+.+..+.+.+... .+...++...+.+++.+.
T Consensus 207 ~S~~K~l~~~~g--~g~l~~~~~~i~~~~~~~~~~~~~~~s~~~~~~aal~~a~~~l~~~g~~~~~~~~~~l~~~l~~~- 283 (446)
T 2x3l_A 207 QSFHKTLPALTM--GSVLYIHKNAPYRENIIEYLSYFQTSSPSYLIMASLESAAQFYKTYDSTLFFAKRAQLIECLENK- 283 (446)
T ss_dssp ECHHHHSSSCTT--CEEEEEETTCTTHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH-
T ss_pred ECCccccccccc--cEEEEEcCCcCCHHHHHHHHHHHcCCCchHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHc-
Confidence 999998877765 699998765432 22221111 112222322222221122111111 111344455555555443
Q ss_pred CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccC-CCCccccccccccccCCCCCHHHH
Q 016612 273 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVS-FGSVKSLISMPCFMSHASIPVEVR 351 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~-~G~~~~~~~~p~~~~~~~~~~~~~ 351 (386)
.+ .... . . ....+++.+++ .....+.+.+...|+.+. .|
T Consensus 284 g~-~~~~-------------~--~-~~~~l~i~~~~-~~~~~l~~~L~~~GI~v~~~g---------------------- 323 (446)
T 2x3l_A 284 GF-EMLQ-------------V--D-DPLKLLIKYEG-FTGHDIQNWFMNAHIYLELAD---------------------- 323 (446)
T ss_dssp TC-EEEE-------------C--S-STTEEEEECTT-SCHHHHHHHHHHTTEEESEEC----------------------
T ss_pred CC-EECc-------------C--C-CCeEEEEEeCC-cCHHHHHHHHHHCCCEEEecC----------------------
Confidence 11 1110 0 1 11246666642 224556666655677654 21
Q ss_pred HhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 352 QARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 352 ~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
.+++|++++ .+++ ++++.|++.++..
T Consensus 324 ------~~~iRi~~~~~~t~e~i-~l~~aL~~~~~~~ 353 (446)
T 2x3l_A 324 ------DYQALAILPLWHHDDTY-LFDSLLRKIEDMI 353 (446)
T ss_dssp ------SSCEEEECCCCCTTCCC-CHHHHHHHHHTCC
T ss_pred ------CCEEEEEeecCCCHHHH-HHHHHHHHHHHhh
Confidence 234999996 3778 8999998887654
No 191
>4h51_A Aspartate aminotransferase; ssgcid, structural genomics, seattle struc genomics center for infectious disease, aspartate aminotran transferase; HET: LLP; 1.85A {Leishmania major}
Probab=99.87 E-value=3.3e-22 Score=187.46 Aligned_cols=201 Identities=14% Similarity=0.050 Sum_probs=131.5
Q ss_pred eeccCCC--CCCCCCcccceeeeeeeecCCC-CCCCCccccCC-CCc-hHHHHHHHHHhhcCCC---ceEEeCcHHHHHH
Q 016612 13 LMNFSNE--FDPYGALSTPLYQTATFKQPSA-TENGPYDYTRS-GNP-TRDALESLLAKLDKAD---RALCFTSGMAALA 84 (386)
Q Consensus 13 ~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~-~~~~~~~y~~~-g~~-~~~~l~~~l~~~~g~~---~~i~~~~gt~al~ 84 (386)
.+|||-+ -|..| .||++++.......+ .......|.+. |.| +++++.+++..-.... ..+.+.+||.|+.
T Consensus 46 kinLgvG~y~d~~g--~~~vl~~Vk~A~~~~~~~~~~~~Y~p~~G~p~lr~aia~~~~g~~~~~~~~~~~qt~ggtga~~ 123 (420)
T 4h51_A 46 KANLVIGAYRDEQG--RPYPLRVVRKAEQLLLDMNLDYEYLPISGYQPFIDEAVKIIYGNTVELENLVAVQTLSGTGAVS 123 (420)
T ss_dssp CEECCSCCCBCTTS--CBCCCHHHHHHHHHHHHTTCCCCCCCTTCCHHHHHHHHHHHHC---CGGGEEEEEEEHHHHHHH
T ss_pred CEEeecCcccCCCC--CCCCCHHHHHHHHHHhcCCCCCCCCCcCChHHHHHHHHHHhcCCCccccccceeeecCchHHHH
Confidence 5788844 23345 334444321111111 12334569888 988 7888777664322222 2344667787764
Q ss_pred H-HH----HhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEE-EeCC---C----CHHHHHhhh---CCCceEEEEeCC
Q 016612 85 A-VT----HLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK-RVNT---C----DLDEVASAI---GPWTKLVWVESP 148 (386)
Q Consensus 85 ~-~~----~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~-~v~~---~----d~~~l~~~~---~~~~~~v~~~~~ 148 (386)
. +. .+++|||+|++++|.|+.+. .+++..|.+.+ ..+. . |.+.+.+.+ .+++++++.++|
T Consensus 124 ~a~~~l~~~~~~pgd~V~ip~P~w~~y~----~i~~~aG~~~V~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~vll~~~p 199 (420)
T 4h51_A 124 LGAKLLTRVFDAETTPIYLSDPTWPNHY----GVVKAAGWKNICTYAYYDPKTVSLNFEGMKKDILAAPDGSVFILHQCA 199 (420)
T ss_dssp HHHHHHTTTSCTTTSCEEEEESCCTHHH----HHHHHTTCCCEEEEECEEGGGTEECHHHHHHHHHHSCSSCEEEEESSS
T ss_pred HHHHHHHHhcCCCCCEEEEecCCchhHH----HHHHHcCCeEEEeeccccccccCCCHHHHHHHHhccCCCcEEEEeCCC
Confidence 2 21 24579999999999999986 44556666532 2221 1 666666554 467888888999
Q ss_pred CCCCccccc---HHHHHHHHHHcCCEEEEeCCCCCCCccC----C-------CCCCccEEEeccccccccCCCceEEEEE
Q 016612 149 TNPRQQICD---IRKIAEMAHAHGALLLVDNSIMSPVLSR----P-------LELGADIVMHSATKFIAGHSDVMAGVLA 214 (386)
Q Consensus 149 ~nptG~~~~---l~~i~~la~~~~~~li~D~a~~~~~~~~----~-------~~~~~di~~~S~sK~~~g~~g~~~G~i~ 214 (386)
|||||.+++ +++|.++|+++++++++|++|..-...+ . ......+++.|+||.+ +..|.|+|+++
T Consensus 200 ~NPtG~~~~~~~~~~i~~~~~~~~~~~~~D~~Y~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~SK~~-~~~G~RvG~~~ 278 (420)
T 4h51_A 200 HNPTGVDPSQEQWNEIASLMLAKHHQVFFDSAYQGYASGSLDTDAYAARLFARRGIEVLLAQSFSKNM-GLYSERAGTLS 278 (420)
T ss_dssp CTTTCCCCCHHHHHHHHHHHHHHTCEEEEEESCTTTTTSCHHHHTHHHHHHHHTTCCCEEEEECTTTS-CCGGGCEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHhcCceEeeehhhhhhccCCcccchHHHHhHHhhCceEEEEecccccc-ccccCceEEEE
Confidence 999999985 7899999999999999999986433221 0 1123568999999999 56689999998
Q ss_pred EcChhH
Q 016612 215 VKGERL 220 (386)
Q Consensus 215 ~~~~~~ 220 (386)
+..+..
T Consensus 279 ~~~~~~ 284 (420)
T 4h51_A 279 LLLKDK 284 (420)
T ss_dssp EECSCH
T ss_pred ecccCH
Confidence 875533
No 192
>1c4k_A Protein (ornithine decarboxylase); lyase; HET: PLP GTP; 2.70A {Lactobacillus SP} SCOP: c.23.1.4 c.67.1.5 d.125.1.1 PDB: 1ord_A*
Probab=99.87 E-value=1.1e-20 Score=187.96 Aligned_cols=210 Identities=13% Similarity=0.032 Sum_probs=149.0
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC------
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------ 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------ 126 (386)
....++++.+++++|.+..+++++|+ +++. ++.+++++||+|++++++|.++... ++...|++++.++.
T Consensus 173 ~~i~e~e~~lA~~~gae~~i~v~nGtt~an~~ai~al~~pGD~VLv~~~~H~S~~~~---~~~l~Ga~~v~v~~~~~~~~ 249 (730)
T 1c4k_A 173 GPAVAAEKHAARVYNADKTYFVLGGSSNANNTVTSALVSNGDLVLFDRNNHKSVYNS---ALAMAGGRPVYLQTNRNPYG 249 (730)
T ss_dssp THHHHHHHHHHHHTTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEETTCCHHHHHH---HTTTTCCEEEEECEEECTTC
T ss_pred HHHHHHHHHHHHHHCCCcEEEECCHHHHHHHHHHHHhcCCCCEEEEcCCchHHHHHH---HHHHCCCEEEEEeCCccccC
Confidence 36889999999999999888888887 7776 5677899999999999999887632 25678888887753
Q ss_pred ----CCHHHH-----HhhhCCC------c----eEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-cc--
Q 016612 127 ----CDLDEV-----ASAIGPW------T----KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-LS-- 184 (386)
Q Consensus 127 ----~d~~~l-----~~~~~~~------~----~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-~~-- 184 (386)
.|++++ +++++++ + +++++++| |++|.+.|+++|+++|+++|+++++|++|+.+. +.
T Consensus 250 i~g~id~e~L~~~~le~~i~~~~~~~~~t~~~vklviv~~p-n~~G~v~dl~~I~~la~~~g~~livDeAh~~~~~f~~~ 328 (730)
T 1c4k_A 250 FIGGIYDSDFDEKKIRELAAKVDPERAKWKRPFRLAVIQLG-TYDGTIYNAHEVVKRIGHLCDYIEFDSAWVGYEQFIPM 328 (730)
T ss_dssp CEEEECGGGSCHHHHHHHTTTSSHHHHTCSCCBSEEEEESB-CTTSEEECHHHHHHHHGGGBSEEEEECTTCCGGGSSGG
T ss_pred ccCCCCHHHHhhhHHHHHhhcCCcccccccCCCeEEEEECC-CCCCeecCHHHHHHHHHHcCCeEEEEcccccccccCcc
Confidence 167777 8888765 5 89999998 589999999999999999999999999987432 11
Q ss_pred ----CCCC---CCcc----EEEeccccccccCCCceEEEEEEcChhH--------HHHHHHh-hhhcCCCCChhhHHHHH
Q 016612 185 ----RPLE---LGAD----IVMHSATKFIAGHSDVMAGVLAVKGERL--------AKELYFL-QNAEGSGLAPFDCWICL 244 (386)
Q Consensus 185 ----~~~~---~~~d----i~~~S~sK~~~g~~g~~~G~i~~~~~~~--------~~~~~~~-~~~~~~~~~~~~~~~~~ 244 (386)
.+.. .++| ++++|+||+++|+.+ +|+++++++.+ ...+... ........+....+.+.
T Consensus 329 ~~g~~~l~~~~~g~D~~~~iv~~S~hK~L~g~~~--gg~I~v~~~~l~g~~~~i~~~~~~~~~~~~~stsp~~~~iaal~ 406 (730)
T 1c4k_A 329 MRNSSPLLIDDLGPEDPGIIVVQSVHKQQAGFSQ--TSQIHKKDSHIKGQLRYCDHKHFNNSFNLFMSTSPFYPMYAALD 406 (730)
T ss_dssp GGGGCTTSCCCCCTTSCEEEEEECHHHHSSCCTT--CEEEEEECGGGTTSTTCCCHHHHHHHHHHHSCSSCCHHHHHHHH
T ss_pred cCCcCcccccccCCCCCCEEEEECCCCCCCCCCC--EEEEEecchhhcCcccccCHHHHHHHHHHhCCCCCcHHHHHHHH
Confidence 1222 2677 999999999987765 68887765543 1222211 11222222322222221
Q ss_pred hcC---C--cHHHHHHHHHHHHHHHHHHHhh
Q 016612 245 RGV---K--TMALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 245 ~~~---~--~~~~~~~~~~~~~~~l~~~l~~ 270 (386)
.++ . ....+.++..++++.+.+.+++
T Consensus 407 aA~~~l~~~~g~~~~~~~~~~a~~lr~~L~~ 437 (730)
T 1c4k_A 407 VNAAMQEGEAGRKLWHDLLITTIEARKKLIK 437 (730)
T ss_dssp HHHHHHSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhhHHHHHHHHHHHHHHHHHHhh
Confidence 111 1 1244566777788888888877
No 193
>1js3_A DDC;, DOPA decarboxylase; carbidopa, parkinson'S disease, vitamin; HET: PLP 142; 2.25A {Sus scrofa} SCOP: c.67.1.6 PDB: 1js6_A* 3rch_A* 3rbl_A 3rbf_A*
Probab=99.87 E-value=4.5e-21 Score=184.77 Aligned_cols=282 Identities=15% Similarity=0.155 Sum_probs=182.1
Q ss_pred hHHHHHHHHHhhcCCCc-----------eEEeCcHHHHHH-HHHHhcC---C------CC--------E--EEecCCCCC
Q 016612 56 TRDALESLLAKLDKADR-----------ALCFTSGMAALA-AVTHLLG---T------GE--------E--IVAGDDLYG 104 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~-----------~i~~~~gt~al~-~~~~~~~---~------g~--------~--Vlv~~~~~~ 104 (386)
+.+++.+++++++|.+. .+++++||+|+. ++.+... + || . |+++.+.|.
T Consensus 114 le~~~~~~la~l~g~~~~~~~~~~~~~~~v~t~ggTeA~~~al~~~~~~~~~~~~~~~gd~~~~~~~~~~~v~~s~~~h~ 193 (486)
T 1js3_A 114 LETVMMDWLGKMLQLPEAFLAGEAGEGGGVIQGSASEATLVALLAARTKVVRRLQAASPGLTQGAVLEKLVAYASDQAHS 193 (486)
T ss_dssp HHHHHHHHHHHHTTCCGGGCCTTTCSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHEEEEEETTCCH
T ss_pred HHHHHHHHHHHHhCCCchhcccCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhhhhccCccchhcccCCCEEEEECCCCcH
Confidence 56677888899998763 578888898864 4443321 1 42 3 788999998
Q ss_pred cHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCCCce------EEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 105 GTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPWTK------LVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 105 ~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~~~~------~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
++. +.++..|++++.++.+ |+++|+++++++++ +|++++++|++|.+.|+++|.++|+++|++++
T Consensus 194 s~~----~~~~~~G~~v~~v~~d~~~~~d~~~L~~~i~~~~~~g~~p~~vv~~~~~n~tG~~~~l~~I~~la~~~~~~lh 269 (486)
T 1js3_A 194 SVE----RAGLIGGVKLKAIPSDGKFAMRASALQEALERDKAAGLIPFFVVATLGTTSCCSFDNLLEVGPICHEEDIWLH 269 (486)
T ss_dssp HHH----HHHHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEE
T ss_pred HHH----HHHHhCCCceEEeecCCCCCCCHHHHHHHHHHHHhCCCCceEEEEeCCCCCCCCCCCHHHHHHHHHHcCCEEE
Confidence 875 5555678899999874 89999999976553 88899999999999999999999999999999
Q ss_pred EeCCCCCCCccCC--C----C-CCccEEEeccccccccCCCceEEEEEEcChhH-HHHHH----Hhhhh-----------
Q 016612 174 VDNSIMSPVLSRP--L----E-LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELY----FLQNA----------- 230 (386)
Q Consensus 174 ~D~a~~~~~~~~~--~----~-~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~-~~~~~----~~~~~----------- 230 (386)
+|++|+.+.+..+ . . .++|++++|+||++++|.+ +|+++++++.. .+.+. .+...
T Consensus 270 vD~a~g~~~~~~~~~~~~~~g~~~adsi~~~~hK~~~~p~~--~G~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~ 347 (486)
T 1js3_A 270 VDAAYAGSAFICPEFRHLLNGVEFADSFNFNPHKWLLVNFD--CSAMWVKRRTDLTGAFKLDPVYLKHSHQGSGLITDYR 347 (486)
T ss_dssp EECTTGGGGGGSTTTGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESCHHHHHGGGC------------CCSCCCGG
T ss_pred EehhhHHHHHHCHHHHHHhcCccccCeeEEchhhhcCCCcc--eEEEEEeCHHHHHHHhcCCchhhCCCcccccCCCCcc
Confidence 9999986654221 1 1 2679999999999977654 89999987653 22210 11000
Q ss_pred -----cCCCCChhhHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEE
Q 016612 231 -----EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLS 303 (386)
Q Consensus 231 -----~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~ 303 (386)
.+........++.+. +.+.+....++..++++.+.+.+++.+.+ .+.. +...++++
T Consensus 348 ~~~~~~~rr~~~~~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~~~--------------~~~~---~~~~~~v~ 410 (486)
T 1js3_A 348 HWQLPLGRRFRSLKMWFVFRMYGVKGLQAYIRKHVQLSHEFEAFVLQDPRF--------------EVCA---EVTLGLVC 410 (486)
T ss_dssp GSSSCSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTE--------------EECS---CCCSSEEE
T ss_pred ccCCCCCCchhHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCe--------------EEeC---CCceeEEE
Confidence 011112233333332 22334555566667777777777765422 1110 01356788
Q ss_pred EEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-c----CChHHHHHHH
Q 016612 304 FLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-I----EDVNDLISDL 377 (386)
Q Consensus 304 ~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-~----~~~~~~i~~l 377 (386)
|.+.+ .....++.+.+...|+....+.. + + +.+++|++++ . ++++++++.|
T Consensus 411 f~~~~~~~~~~~l~~~L~~~g~~~~~~~~---~-------------------~-~~~~lRi~~~~~~~t~~di~~~~~~l 467 (486)
T 1js3_A 411 FRLKGSDGLNEALLERINSARKIHLVPCR---L-------------------R-GQFVLRFAICSRKVESGHVRLAWEHI 467 (486)
T ss_dssp EEESSCHHHHHHHHHHHHHHTSCBCEEEE---E-------------------T-TEEEEEEECCCTTCCHHHHHHHHHHH
T ss_pred EEecChHHHHHHHHHHHHhcCCEEEEEEE---E-------------------C-CEEEEEEEeCCCCCCHHHHHHHHHHH
Confidence 88753 22346666666555543211110 0 0 2456999974 3 4677777777
Q ss_pred HHHHhc
Q 016612 378 DKALRT 383 (386)
Q Consensus 378 ~~~l~~ 383 (386)
++.+++
T Consensus 468 ~~~~~~ 473 (486)
T 1js3_A 468 RGLAAE 473 (486)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 776643
No 194
>3a8u_X Omega-amino acid--pyruvate aminotransferase; large pleated sheet, transaminase, pyridox phosphate; HET: PLP; 1.40A {Pseudomonas putida}
Probab=99.87 E-value=2.3e-21 Score=185.00 Aligned_cols=283 Identities=13% Similarity=0.134 Sum_probs=177.4
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHH-HhcC--------CCCEEEecCCCCCcHHHHHhhhcc-------
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVT-HLLG--------TGEEIVAGDDLYGGTDRLLSRVTP------- 115 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~-~~~~--------~g~~Vlv~~~~~~~~~~~~~~~~~------- 115 (386)
.+.+.++++.++++++. ++.+++++|++|+.+++ .+.. +||+|++.+|.|++..........
T Consensus 92 ~~~~~~l~~~la~~~~~~~~~v~~~~ggsea~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~g~~~~~~~ 171 (449)
T 3a8u_X 92 HPLSFQLAEKITDLTPGNLNHVFFTDSGSECALTAVKMVRAYWRLKGQATKTKMIGRARGYHGVNIAGTSLGGVNGNRKL 171 (449)
T ss_dssp CHHHHHHHHHHHTTSSTTEEEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCHHHHTT
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEcCcHHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCCChhhhhccCChhhccc
Confidence 35788999999999854 36777888899987443 3332 689999999999875321112211
Q ss_pred ----cCCcEEEEeCC--------CC--------HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHH
Q 016612 116 ----KTGVVVKRVNT--------CD--------LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHA 167 (386)
Q Consensus 116 ----~~g~~~~~v~~--------~d--------~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~ 167 (386)
..++..+.++. .| ++++++.++ +++++|++++.+|++|.+.+ +++|.++|++
T Consensus 172 ~~~~~~~~~~v~~~~~~~~~~~~~d~~~~~~~~~~~le~~l~~~~~~~~~~vi~~p~~~~tG~~~~~~~~l~~l~~l~~~ 251 (449)
T 3a8u_X 172 FGQPMQDVDHLPHTLLASNAYSRGMPKEGGIALADELLKLIELHDASNIAAVFVEPLAGSAGVLVPPEGYLKRNREICNQ 251 (449)
T ss_dssp TCCCSCSEEEECCCCCGGGTTCSSSCSSSHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHH
T ss_pred cCCCCCCCeEecCCccccCccccCChHHHHHHHHHHHHHHHHhcCCCCEEEEEEcCccCCCCCccCCHHHHHHHHHHHHH
Confidence 12344444432 14 888998886 46788888877788998887 9999999999
Q ss_pred cCCEEEEeCCCC-CCCccC-----CCCCCccEEEeccccccccCCC-ceEEEEEEcChhHHHHHHHhh---------hhc
Q 016612 168 HGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSD-VMAGVLAVKGERLAKELYFLQ---------NAE 231 (386)
Q Consensus 168 ~~~~li~D~a~~-~~~~~~-----~~~~~~di~~~S~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~~---------~~~ 231 (386)
||++||+||+|+ .+.... ......|++ |+||++++ | +|+|+++++ +++.+.+.... ...
T Consensus 252 ~~~~li~Dev~~~~g~~g~~~~~~~~~~~~di~--s~sK~l~~--G~~~~G~~~~~-~~~~~~l~~~~~~~~~~~~~~~~ 326 (449)
T 3a8u_X 252 HNILLVFDEVITGFGRTGSMFGADSFGVTPDLM--CIAKQVTN--GAIPMGAVIAS-TEIYQTFMNQPTPEYAVEFPHGY 326 (449)
T ss_dssp HTCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT--TSSCCEEEEEE-HHHHHHHHTCSSCTTSCSSCCCC
T ss_pred hCCEEEEeccccCccccCcchhhhhcCCCCCEE--EEcccccC--CCCceEEEEEC-HHHHHHhhccCcccccccccccC
Confidence 999999999995 443221 112345766 77899964 5 789999887 45665554321 111
Q ss_pred CCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH
Q 016612 232 GSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 309 (386)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (386)
....++..++++..+++.+.. ..++..++.+.+.+.+++.. .++.. ...++.+.++++.+...
T Consensus 327 t~~~~~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-----------~~~~~----~~~~~~g~~~~i~~~~~ 391 (449)
T 3a8u_X 327 TYSAHPVACAAGLAALCLLQKENLVQSVAEVAPHFEKALHGIK-----------GAKNV----IDIRNFGLAGAIQIAPR 391 (449)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHTTT-----------TSTTE----EEEEEETTEEEEEECCB
T ss_pred CCcccHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHh-----------cCCCe----EEEeeeEEEEEEEEecC
Confidence 223455555555554443221 23334444444555554321 11111 01134578889888532
Q ss_pred H-----hHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHH
Q 016612 310 A-----LSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKA 380 (386)
Q Consensus 310 ~-----~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~ 380 (386)
. ....+.+.+...|+.+++++ +++||+++ .++++++++.|+++
T Consensus 392 ~~~~~~~~~~~~~~l~~~Gv~v~~~g----------------------------~~iRis~~~~~t~~~i~~~l~~l~~~ 443 (449)
T 3a8u_X 392 DGDAIVRPFEAGMALWKAGFYVRFGG----------------------------DTLQFGPTFNSKPQDLDRLFDAVGEV 443 (449)
T ss_dssp TTBSSHHHHHHHHHHHHHTEECEEET----------------------------TEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHHCCcEEecCC----------------------------CEEEEECCCcCCHHHHHHHHHHHHHH
Confidence 1 12356666666787665421 34999964 47888888888888
Q ss_pred HhcC
Q 016612 381 LRTG 384 (386)
Q Consensus 381 l~~~ 384 (386)
+++.
T Consensus 444 l~~~ 447 (449)
T 3a8u_X 444 LNKL 447 (449)
T ss_dssp HHHC
T ss_pred HHHH
Confidence 8754
No 195
>2a7v_A Serine hydroxymethyltransferase; structural genomics, structural genomics consortium, SGC; 2.04A {Homo sapiens} PDB: 3ou5_A
Probab=99.87 E-value=1e-20 Score=180.35 Aligned_cols=283 Identities=16% Similarity=0.136 Sum_probs=167.5
Q ss_pred HHHHHHHhhcCCCc----e-EEeCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHh----hhcccCCcE--EEEeC-
Q 016612 59 ALESLLAKLDKADR----A-LCFTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTGVV--VKRVN- 125 (386)
Q Consensus 59 ~l~~~l~~~~g~~~----~-i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~g~~--~~~v~- 125 (386)
..++++++++|.+. . ++++||++|+. ++.++++|||+|+++++.|+++..... ..+...|.. ++.++
T Consensus 104 ~a~~~~a~l~g~~~~~~~~~v~~~sGt~An~~al~al~~pGD~Vl~~~~~h~g~l~h~~~~~~~~i~~~g~~~~~~~~~v 183 (490)
T 2a7v_A 104 LCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATSIFFESMPYKL 183 (490)
T ss_dssp HHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCCSCEECCC-------------------------------CCB
T ss_pred HHHHHHHHHcCCCcccCceEEeCCchHHHHHHHHHHHcCCCCEecccCccccccccchhhhcchhHHHcCCeEEEEeccc
Confidence 34499999999985 3 34469998876 677799999999999999876532100 012233432 33332
Q ss_pred -----CCCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCC-----CccCCCCCCccEE
Q 016612 126 -----TCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSP-----VLSRPLELGADIV 194 (386)
Q Consensus 126 -----~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~-----~~~~~~~~~~di~ 194 (386)
..|++++++.+. .++++|+++.++|| ...|+++|.++|+++|+++++|++|+.+ ....+.. ++|++
T Consensus 184 d~~~~~iD~d~le~~l~~~~~klIi~~~s~~~--~~~dl~~i~~ia~~~g~~livD~Ah~~glv~~g~~~~~~~-~aDiv 260 (490)
T 2a7v_A 184 NPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIPSPFK-HADIV 260 (490)
T ss_dssp CTTTCSBCHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHTTCEEEEECGGGHHHHHTTSSCCGGG-TCSEE
T ss_pred ccccCCcCHHHHHHHHhhcCCcEEEEcCCCCC--CcccHHHHHHHHHHcCCEEEEccccccccccCCcCCCCCC-CCCEE
Confidence 238999999886 47899998888886 4679999999999999999999998643 2233333 68999
Q ss_pred EeccccccccCCCceEEEEEEcCh--------------hHHHHHHHhhhhcCC-CCChhhHHHHH----hcC-CcHHHHH
Q 016612 195 MHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQNAEGS-GLAPFDCWICL----RGV-KTMALRV 254 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~~~--------------~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~-~~~~~~~ 254 (386)
++|+||+++||. +|+++++++ ++.+.++........ +......+++. ..+ ..+..+.
T Consensus 261 ~~S~hK~l~Gp~---GG~i~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~g~qggp~~~~iaAla~Al~~~~~~~~~~~~ 337 (490)
T 2a7v_A 261 TTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQACTPMFREYS 337 (490)
T ss_dssp EEESSGGGCSCS---CEEEEEECSEEEEETTTEEEEECCCHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHSHHHHHHH
T ss_pred EECCcccCcccc---chheeeccchhcccccccchhhHHHHHHHHHHhcccCCCCchHHHHHHHHHHHHHHhhhhHHHHH
Confidence 999999997764 699998864 244545443322211 12221111111 111 2335566
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcceeccCCCCccc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKS 333 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~~~~G~~~~ 333 (386)
++..++++.+.+.|.+.. + .+.. ......++++.+... ...+++.+.|...||.++.+..
T Consensus 338 ~~~~~na~~L~~~L~~~G---------~------~v~~--~~t~t~lv~vdl~~~g~~~~~~~~~L~~~GI~v~~~~~-- 398 (490)
T 2a7v_A 338 LQVLKNARAMADALLERG---------Y------SLVS--GGTDNHLVLVDLRPKGLDGARAERVLELVSITANKNTC-- 398 (490)
T ss_dssp HHHHHHHHHHHHHHHHTT---------C------EEGG--GSCSSSEEEEECTTTTCCHHHHHHHHHHTTEECEEECC--
T ss_pred HHHHHHHHHHHHHHHHcC---------c------EEec--CCCCCeEEEEEeCCCCCCHHHHHHHHHhCCeEEecCcc--
Confidence 778888999998888752 1 1110 011246777777432 2345566666666777654321
Q ss_pred cccccccccCCCCCHHHHHhcCCCCCeEEEEec--------cCChHHHHHHHHHHHh
Q 016612 334 LISMPCFMSHASIPVEVRQARGLTEDLVRISVG--------IEDVNDLISDLDKALR 382 (386)
Q Consensus 334 ~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~--------~~~~~~~i~~l~~~l~ 382 (386)
|.-. ....++.||++.. .++++++++.|.++++
T Consensus 399 ----p~d~------------~p~~~~~iRig~~a~t~~g~~~~d~~~~~~~i~~~l~ 439 (490)
T 2a7v_A 399 ----PGDR------------SAITPGGLRLGAPALTSRQFREDDFRRVVDFIDEGVN 439 (490)
T ss_dssp ----TTCC------------CSSSCSEEEEESHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred ----CCCC------------CCCCCCceEecccccccCCCCHHHHHHHHHHHHHHHH
Confidence 1000 0112456999762 3777777888777765
No 196
>2qma_A Diaminobutyrate-pyruvate transaminase and L-2,4- diaminobutyrate decarboxylase; structural genomics, APC91511.1, glutamate decarboxylase; HET: MSE; 1.81A {Vibrio parahaemolyticus}
Probab=99.86 E-value=4.2e-21 Score=185.43 Aligned_cols=284 Identities=14% Similarity=0.140 Sum_probs=177.6
Q ss_pred hHHHHHHHHHhhcCCC---ceEEeCcHHHHHH-HHHH----hc---------CC------CC-EEEecCCCCCcHHHHHh
Q 016612 56 TRDALESLLAKLDKAD---RALCFTSGMAALA-AVTH----LL---------GT------GE-EIVAGDDLYGGTDRLLS 111 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~---~~i~~~~gt~al~-~~~~----~~---------~~------g~-~Vlv~~~~~~~~~~~~~ 111 (386)
+.+++++++++++|.+ ..+++++||+|+. ++.. ++ .+ |+ .|+++.+.|.++...+.
T Consensus 141 le~~~~~~la~~~g~~~~~~~~~t~ggt~a~~~al~~ar~~~~~~~~~~~~~~~G~~~~~g~~~v~~s~~~h~s~~~~~~ 220 (497)
T 2qma_A 141 VEQKVVNWLCDKYDLSEKADGIFTSGGTQSNQMGLMLARDWIADKLSGHSIQKLGLPDYADKLRIVCSKKSHFTVQKSAS 220 (497)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEESSHHHHHHHHHHHHHHHHHHHHHCCCHHHHCSCGGGGGEEEEEETTSCTHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCCCeEEcCCchHHHHHHHHHHHHHHHHhhcccchhhcccccccCCeEEEECCCchHHHHHHHH
Confidence 4566688899999873 5777788888875 3433 22 13 46 78999999998865542
Q ss_pred hhcccCCc-EEEEeCCC-----CHHHHHhhhCCC----ce--EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 112 RVTPKTGV-VVKRVNTC-----DLDEVASAIGPW----TK--LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 112 ~~~~~~g~-~~~~v~~~-----d~~~l~~~~~~~----~~--~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
... .|. +++.++.+ |+++|++.++++ ++ +|++++++|++|.+.|+++|.++|+++|+++++|++|+
T Consensus 221 -~~g-~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~~~~~~~vv~~~~~~~tG~~~~l~~I~~l~~~~~~~l~vD~a~~ 298 (497)
T 2qma_A 221 -WMG-LGEKAVMTVDANADGTMDITKLDEVIAQAKAEGLIPFAIVGTAGTTDHGAIDDLDFIADMAVKHDMWMHVDGAYG 298 (497)
T ss_dssp -HTT-SCGGGEEEECBCTTSSBCGGGHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTG
T ss_pred -HcC-CCcccEEEEecCCCCcCCHHHHHHHHHHHHHCCCcceEEEEcCCCCCCCCCCCHHHHHHHHHHcCCEEEEehhhh
Confidence 221 133 67777764 889999888642 44 88889999999999999999999999999999999998
Q ss_pred CCCccCC-----CCC-CccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh-h--hcC--------------CCCC
Q 016612 180 SPVLSRP-----LEL-GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ-N--AEG--------------SGLA 236 (386)
Q Consensus 180 ~~~~~~~-----~~~-~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~-~--~~~--------------~~~~ 236 (386)
.+..... ... ++|+++.|+||++++|.+ +|+++++++...+.+.... + ... ....
T Consensus 299 ~~~~~~~~~~~~~gi~~~D~i~~s~hK~l~~p~~--~G~l~~~~~~~~~~~~~~~~yl~~~~~~~~~~~~~~~~~~r~~~ 376 (497)
T 2qma_A 299 GALILSSHKSRLKGVERAHSISVDFHKLFYQTIS--CGALLVNDKSNFKFLLHHADYLNREHDELPNLVDKSIATTKRFD 376 (497)
T ss_dssp GGGGGSTTGGGGTTGGGCSEEEEETTTTTCCCSS--CEEEEESCGGGGGGGCC--------------------CCSCCCT
T ss_pred HHHHhCcchHhhcCcccCCEEEEcchhccCCCcc--eEEEEEeCHHHHHHhcCCchhcCCccccCCCccccCCCCCCchh
Confidence 7654322 122 679999999999988754 7998888665322111000 0 000 0011
Q ss_pred hhhHHHHHhcCC--cHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----
Q 016612 237 PFDCWICLRGVK--TMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL----- 309 (386)
Q Consensus 237 ~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~----- 309 (386)
....++.+..+. .+....++..++++.+.+.+++.+.+ .++. +..+++++|.+...
T Consensus 377 al~~~~~l~~lg~~g~~~~~~~~~~~a~~l~~~L~~~~~~--------------~~~~---~~~~~~v~f~~~~~~~~~~ 439 (497)
T 2qma_A 377 ALKVFMTMQNVGPKALGDMYDHLLAQTLEVADMIRTNDQF--------------ELLA---EPSLSTVLFRATHETADLD 439 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHTCTTE--------------EECS---CCSSSEEEEEECCSSSCHH
T ss_pred HHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhhCCCe--------------EEEc---CCCceEEEEEEcCCccCHH
Confidence 222333333332 23344555666777777777754321 1111 11356888887432
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe-c----cCChHHHHHHHHHHHhc
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV-G----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~-~----~~~~~~~i~~l~~~l~~ 383 (386)
....++.+.+...|+.+..+.. . .+.+++|+++ + .++++++++.|++++++
T Consensus 440 ~l~~~l~~~l~~~G~~~~~~~~---~--------------------~g~~~lRis~~~~~~t~edi~~~~~~l~~~~~~ 495 (497)
T 2qma_A 440 ELNKALRLEALTRGIAVLGETI---V--------------------DGKTALKFTILNPCLTTSDFESLLSKINMLAVE 495 (497)
T ss_dssp HHHHHHHHHHHHHTSCBCEEEE---E--------------------TTEEEEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEeeE---E--------------------CCEEEEEEEecCCCCCHHHHHHHHHHHHHHHHh
Confidence 2234555666555654322110 0 0235699998 4 36777777777776654
No 197
>3oks_A 4-aminobutyrate transaminase; ssgcid, transferase, seattle structural genomics center for infectious disease; HET: LLP; 1.80A {Mycobacterium smegmatis} PDB: 3r4t_A* 3q8n_A
Probab=99.86 E-value=1.6e-21 Score=186.07 Aligned_cols=322 Identities=15% Similarity=0.161 Sum_probs=190.2
Q ss_pred eeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC--CCchHHHHHHHHHhhcC---CCceEEeCcHHHHHHH
Q 016612 13 LMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDK---ADRALCFTSGMAALAA 85 (386)
Q Consensus 13 ~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~ 85 (386)
.+++..+ ...+|..+|.+.++...... .. ..|+.. ..+.+.+++++++++++ .++.++++||++|+.+
T Consensus 63 ylD~~~~~~~~~lGh~~p~v~~A~~~~~~---~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~ 137 (451)
T 3oks_A 63 LIDLGSGIAVTTVGNSAPKVVEAVRSQVG---DF--THTCFMVTPYEGYVAVCEQLNRLTPVRGDKRSALFNSGSEAVEN 137 (451)
T ss_dssp EEESSHHHHTCTTCTTCHHHHHHHHHHHT---TC--SCCTTTTSCCHHHHHHHHHHHHHSSCCSSEEEEEESSHHHHHHH
T ss_pred EEEcCCCccccccCCCCHHHHHHHHHHHH---hc--ccccCCccCCHHHHHHHHHHHHhCCcCCCCEEEEeCcHHHHHHH
Confidence 4555422 34577666665553222111 11 223332 34578899999999985 3468888999999875
Q ss_pred HHH-hc--CCCCEEEecCCCCCcHHHHHhhhc----------ccCCcEEEEeCCC------------------CHHHHHh
Q 016612 86 VTH-LL--GTGEEIVAGDDLYGGTDRLLSRVT----------PKTGVVVKRVNTC------------------DLDEVAS 134 (386)
Q Consensus 86 ~~~-~~--~~g~~Vlv~~~~~~~~~~~~~~~~----------~~~g~~~~~v~~~------------------d~~~l~~ 134 (386)
++. .. ..++.|++.++.|+++........ ......+..++.. +++.+++
T Consensus 138 Alk~a~~~~g~~~ii~~~~~yhG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 217 (451)
T 3oks_A 138 AVKIARSHTHKPAVVAFDHAYHGRTNLTMALTAKVMPYKDGFGPFAPEIYRAPLSYPFRDAEFGKELATDGELAAKRAIT 217 (451)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTCCSCCSSEEEECCCCHHHHGGGCTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHhcCCCeEEEEcCCcCCccHHHHHhcCCCcccccCCCCCCCCcEEeCCCccccccccccccchhhHHHHHHHHH
Confidence 443 33 345889999999887643322211 1111134444433 2333333
Q ss_pred hh----C-CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEeccc
Q 016612 135 AI----G-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSAT 199 (386)
Q Consensus 135 ~~----~-~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~s 199 (386)
.+ . +++++|+++..+++.|.+.+ +++|.++|++||++||+||+|.. +... .......|++ |+|
T Consensus 218 ~l~~~~~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~g~~g~~~~~~~~~~~pdi~--t~s 295 (451)
T 3oks_A 218 VIDKQIGADNLAAVVIEPIQGEGGFIVPADGFLPTLLDWCRKNDVVFIADEVQTGFARTGAMFACEHEGIDPDLI--VTA 295 (451)
T ss_dssp HHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--EEC
T ss_pred HHHhhcCCCCEEEEEEcCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEecccCCCccccchhhhhcCCCCCee--eeh
Confidence 33 3 45667777776766677765 99999999999999999999862 2211 1112345666 678
Q ss_pred cccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceE
Q 016612 200 KFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKV 277 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~ 277 (386)
|.+++ |+|+|+++++ +++.+.+.........+.++..++++...++.+.. ..++..++.+.+.+.+++..
T Consensus 296 K~l~~--G~~iG~v~~~-~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~----- 367 (451)
T 3oks_A 296 KGIAG--GLPLSAVTGR-AEIMDSPHVSGLGGTYGGNPIACAAALATIETIESEGLVARAQQIEKIMKDRLGRLQ----- 367 (451)
T ss_dssp GGGGT--TSSCEEEEEE-HHHHTCSCTTSBCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-----
T ss_pred hhhhC--CcceEEEEEC-HHHHhhhcCCCcCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHH-----
Confidence 99964 6899999986 55655443333333445666666666555543221 23334444444444444320
Q ss_pred ecCCCCCCCchhhhhhccCCCCceEEEEe-------CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHH
Q 016612 278 NYAGLPEHPGHELHYSQAKGAGSVLSFLT-------GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEV 350 (386)
Q Consensus 278 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~ 350 (386)
..++.. ...++.|.++++.+ ++.....++.+.+...|+.+.+++.
T Consensus 368 -----~~~~~~----~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------------------- 419 (451)
T 3oks_A 368 -----AEDDRI----GDVRGRGAMIAMELVKAGTTEPDADLTKALCAGAHAAGVIVLSCGT------------------- 419 (451)
T ss_dssp -----HHCTTE----EEEEEETTEEEEEEBSTTSCCBCHHHHHHHHHHHHHTTEECEEECT-------------------
T ss_pred -----hhCCCe----EEEEEeeEEEEEEEecCccCCCCHHHHHHHHHHHHhCCcEEecCCC-------------------
Confidence 000100 11244578888887 3445577788888888887665432
Q ss_pred HHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 351 RQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 351 ~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
..+++|++++ .+++++.++.|++++++
T Consensus 420 ------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 450 (451)
T 3oks_A 420 ------YGNVVRFLPPLSIGDDLLNEGLDVLEEVLRG 450 (451)
T ss_dssp ------TSCEEEECCCTTCCHHHHHHHHHHHHHHHHC
T ss_pred ------CCCEEEEECCCCCCHHHHHHHHHHHHHHHhh
Confidence 1356999865 47788888888888764
No 198
>1zod_A DGD, 2,2-dialkylglycine decarboxylase; pyridoxal, cesium, lyase; HET: MES PLP; 1.80A {Burkholderia cepacia} SCOP: c.67.1.4 PDB: 1dka_A* 1m0o_A* 1m0p_A* 1m0n_A* 1zc9_A* 1zob_A* 1m0q_A* 2dkb_A* 1dgd_A* 1dge_A* 1d7u_A* 1d7s_A* 1d7r_A* 1d7v_A* 1z3z_A*
Probab=99.86 E-value=1.6e-20 Score=178.20 Aligned_cols=288 Identities=15% Similarity=0.135 Sum_probs=177.8
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHH-hc--CCCCEEEecCCCCCcHHHHHhhhc----------ccCC
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTH-LL--GTGEEIVAGDDLYGGTDRLLSRVT----------PKTG 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~-~~--~~g~~Vlv~~~~~~~~~~~~~~~~----------~~~g 118 (386)
.+.+.++++.++++++. ++.++++||++|+..++. +. ..+++|++.+|.|++......... ...|
T Consensus 84 ~~~~~~l~~~la~~~~~~~~~v~~~~gg~ea~~~a~~~~~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 163 (433)
T 1zod_A 84 SRPVVDLATRLANITPPGLDRALLLSTGAESNEAAIRMAKLVTGKYEIVGFAQSWHGMTGAAASATYSAGRKGVGPAAVG 163 (433)
T ss_dssp CHHHHHHHHHHHHHSCTTCCEEEEESCHHHHHHHHHHHHHHHHTCCEEEEETTCCCCSSHHHHHTCCSSCCSSSCCCCTT
T ss_pred CHHHHHHHHHHHHhCCCCcCEEEEeCchHHHHHHHHHHHHHhhCCCeEEEECCCcCCCChhHHhhcCCccccccCCCCCC
Confidence 35788999999999874 467777888999875443 22 346799999999976532211111 1125
Q ss_pred cEEEEeCC------C---------CHHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEe
Q 016612 119 VVVKRVNT------C---------DLDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 119 ~~~~~v~~------~---------d~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D 175 (386)
+..+.++. . |++++++.++ +++++|++++.+||+|.+.+ +++|.++|++||++||+|
T Consensus 164 ~~~v~~~~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~D 243 (433)
T 1zod_A 164 SFAIPAPFTYRPRFERNGAYDYLAELDYAFDLIDRQSSGNLAAFIAEPILSSGGIIELPDGYMAALKRKCEARGMLLILD 243 (433)
T ss_dssp EEEECCCCTTSCCCEETTEECHHHHHHHHHHHHHHHCCSCEEEEEECSEETTTTCEECCTTHHHHHHHHHHHHTCEEEEE
T ss_pred ceEecCCcccccccCCchhhhHHHHHHHHHHHHHhcCCCCeEEEEEccccCCCCcccCCHHHHHHHHHHHHHhCCEEEEe
Confidence 55544432 1 3888988886 56778887777788998765 999999999999999999
Q ss_pred CCCC-CCCccCC-----CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhh--cCCCCChhhHHHHHhcC
Q 016612 176 NSIM-SPVLSRP-----LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNA--EGSGLAPFDCWICLRGV 247 (386)
Q Consensus 176 ~a~~-~~~~~~~-----~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 247 (386)
|+|+ .+..... .....|++ |+||++++ |+|+|++++++ ++.+.+...... .....++..+.++..++
T Consensus 244 Ev~~~~g~~g~~~~~~~~~~~~di~--s~sK~~~~--G~~ig~~~~~~-~~~~~~~~~~~~~~~t~~~~~~~~~a~~aal 318 (433)
T 1zod_A 244 EAQTGVGRTGTMFACQRDGVTPDIL--TLSKTLGA--GLPLAAIVTSA-AIEERAHELGYLFYTTHVSDPLPAAVGLRVL 318 (433)
T ss_dssp CTTTTTTTTSSSSTHHHHTCCCSEE--EECHHHHT--TSSCEEEEECH-HHHHHHHHTTCCCCCTTTTCHHHHHHHHHHH
T ss_pred ccccCCCcCchHhHHhhcCCCCCEE--EecccccC--CCCeeEEEEhH-HHHHhhccCCCCCCCCCCcCHHHHHHHHHHH
Confidence 9997 3322111 12245654 78999964 68999999974 566555442111 22344555555554444
Q ss_pred CcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC--------HHhHHHHHh
Q 016612 248 KTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS--------LALSKHVVE 317 (386)
Q Consensus 248 ~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~--------~~~~~~l~~ 317 (386)
+.+.. ..++..++.+.+.+.+++.. ..+ +.. ...++.+.++++.+.. .....++.+
T Consensus 319 ~~~~~~~~~~~~~~~~~~l~~~l~~l~-------~~~---~~~----~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~ 384 (433)
T 1zod_A 319 DVVQRDGLVARANVMGDRLRRGLLDLM-------ERF---DCI----GDVRGRGLLLGVEIVKDRRTKEPADGLGAKITR 384 (433)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHH-------HHC---TTE----EEEEEETTEEEEEEEEETTTTEECTTHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHHHH-------HhC---CCe----EEEEEEEEEEEEEEecCccccCCChHHHHHHHH
Confidence 32211 22333444444444444310 000 000 0113356788887632 123566777
Q ss_pred hcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 318 TTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 318 ~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.+...|+.+.+|..+ + .++++||+++ .++++++++.|++++++
T Consensus 385 ~l~~~Gv~v~~~~~~----------------------~-~~~~lRi~~~~~~t~~~i~~~l~~l~~~l~~ 431 (433)
T 1zod_A 385 ECMNLGLSMNIVQLP----------------------G-MGGVFRIAPPLTVSEDEIDLGLSLLGQAIER 431 (433)
T ss_dssp HHHHTTEECCEECCT----------------------T-SCCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCeEeccCCC----------------------C-CCCEEEEECCcCCCHHHHHHHHHHHHHHHHH
Confidence 777778877665421 1 1467999864 47788888888887765
No 199
>2cy8_A D-phgat, D-phenylglycine aminotransferase; structural genomics, NPPSFA, national PROJ protein structural and functional analyses; 2.30A {Pseudomonas stutzeri}
Probab=99.86 E-value=2.2e-21 Score=185.34 Aligned_cols=317 Identities=16% Similarity=0.127 Sum_probs=182.6
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH 88 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~~ 88 (386)
..++++.+ ..++|..+|.+.++...... . . ..|. ...+++.++.+++++.+ +.++.++++||++|+.+++.
T Consensus 58 ~~iD~~~~~~~~~lg~~~~~v~~a~~~~~~---~-~-~~~~-~~~~~~~~la~~l~~~~~~~~~v~~~~gg~eA~~~al~ 131 (453)
T 2cy8_A 58 VYLDFFGGHGALVLGHGHPRVNAAIAEALS---H-G-VQYA-ASHPLEVRWAERIVAAFPSIRKLRFTGSGTETTLLALR 131 (453)
T ss_dssp EEEESCTTTTSCTTCBTCHHHHHHHHHHHT---T-T-CSSC-SSCHHHHHHHHHHHHHCTTCSEEEEESCHHHHHHHHHH
T ss_pred EEEECcccHhhcccCCCCHHHHHHHHHHHH---h-C-CCCC-CCCHHHHHHHHHHHhhCCCCCEEEEeCCHHHHHHHHHH
Confidence 35566522 25677755555543222111 1 1 1121 12357899999999888 45578888899999875433
Q ss_pred h---cCCCCEEEecCCCCCcHHHHHhhhc-------ccCCc------EEEEeCCCCHHHHHhhhC---CCceEEEEeCCC
Q 016612 89 L---LGTGEEIVAGDDLYGGTDRLLSRVT-------PKTGV------VVKRVNTCDLDEVASAIG---PWTKLVWVESPT 149 (386)
Q Consensus 89 ~---~~~g~~Vlv~~~~~~~~~~~~~~~~-------~~~g~------~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~ 149 (386)
. +.+++.|++.+|.|+++........ ...|+ .+..++..|++++++.++ +++++|++++.+
T Consensus 132 ~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~ 211 (453)
T 2cy8_A 132 VARAFTGRRMILRFEGHYHGWHDFSASGYNSHFDGQPAPGVLPETTANTLLIRPDDIEGMREVFANHGSDIAAFIAEPVG 211 (453)
T ss_dssp HHHHHHCCCEEEEECC----------------------------CGGGEEEECTTCHHHHHHHHHHHGGGEEEEEECSSE
T ss_pred HHHHhhCCCEEEEEcCCcCCCchhhHhhcCCccCCCcCCCCCccccCceeecCCCCHHHHHHHHHhcCCCEEEEEECCCC
Confidence 3 4455788888898886543211101 01233 345566679999998886 477888888877
Q ss_pred CCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCCcc-C-----CCCCCccEEEeccccccccCCCceEEEEEEcChh
Q 016612 150 NPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS-R-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 150 nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~~~-~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~ 219 (386)
|++|.+.+ +++|.++|++||++||+||+|+ +... . ......|++ |+||++++ |+++|++++++ +
T Consensus 212 ~~tG~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~-g~~~g~~~~~~~~~~~~di~--s~sK~l~~--G~~~G~v~~~~-~ 285 (453)
T 2cy8_A 212 SHFGVTPVSDSFLREGAELARQYGALFILDEVIS-GFRVGNHGMQALLDVQPDLT--CLAKASAG--GLPGGILGGRE-D 285 (453)
T ss_dssp HHHHTEECCHHHHHHHHHHHHHTTCEEEEECTTT-TTTTCTTHHHHHHTCCCSEE--EEEGGGGT--TSSCEEEEECH-H
T ss_pred CCCCCcCCCHHHHHHHHHHHHHcCCEEEEecCcc-ccccCchhhhHHhCCCCcEE--EEChhhhC--CcceEEEechH-H
Confidence 88998887 9999999999999999999997 3211 1 112345765 78999964 67899999874 4
Q ss_pred HHHHHHH-----hhhhcCCCCChhhHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhh
Q 016612 220 LAKELYF-----LQNAEGSGLAPFDCWICLRGVKT-M-ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHY 292 (386)
Q Consensus 220 ~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~ 292 (386)
+.+.+.. .........++..++++...++. + ....++..++.+.+.+.+++... ..+ +.
T Consensus 286 ~~~~l~~~~~~~~~~~~t~~~n~~~~aa~~aal~~~~~~~~~~~~~~~~~~l~~~L~~~~~----~~~-~~--------- 351 (453)
T 2cy8_A 286 VMGVLSRGSDRKVLHQGTFTGNPITAAAAIAAIDTILEDDVCAKINDLGQFAREAMNHLFA----RKG-LN--------- 351 (453)
T ss_dssp HHTTSSSCC---------CCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHH----HTT-CC---------
T ss_pred HHHHhccccCCCceeCCCCCCCHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHh----hCC-Cc---------
Confidence 5443322 01111234556666655554443 2 12233444444455555443210 000 00
Q ss_pred hccCCCCceEEEEeCC-------------------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHh
Q 016612 293 SQAKGAGSVLSFLTGS-------------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQA 353 (386)
Q Consensus 293 ~~~~~~~~~~~~~~~~-------------------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~ 353 (386)
...++.|.++++.+.+ .....++.+.+...|+.+.++.
T Consensus 352 ~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Gv~v~~~~----------------------- 408 (453)
T 2cy8_A 352 WLAYGRFSGFHLMPGLPPNTTDTGSITRAEVARPDVKMIAAMRMALILEGVDIGGRG----------------------- 408 (453)
T ss_dssp EEEECCTTEEEEEETSCTTCCCCHHHHTTCSCCCCHHHHHHHHHHHHHTTEECBTTT-----------------------
T ss_pred EEEEEeeeEEEEEEeccccccccccccccccccccHHHHHHHHHHHHHCCeEEeCCC-----------------------
Confidence 0113467889998863 1235567777777788663321
Q ss_pred cCCCCCeEEEEe--ccCChHHHHHHHHHHHhc
Q 016612 354 RGLTEDLVRISV--GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 354 ~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~ 383 (386)
.+|+++ +.++++++++.|++++++
T Consensus 409 ------~~~l~~~~t~~~i~~~l~~l~~~l~~ 434 (453)
T 2cy8_A 409 ------SVFLSAQHEREHVEHLVTTFDRVLDR 434 (453)
T ss_dssp ------EEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------CEEeeccCCHHHHHHHHHHHHHHHHH
Confidence 155553 348888889999888764
No 200
>4ffc_A 4-aminobutyrate aminotransferase (GABT); structural genomics, niaid, national institute of allergy AN infectious diseases; HET: LLP; 1.80A {Mycobacterium abscessus}
Probab=99.86 E-value=1.3e-21 Score=186.63 Aligned_cols=322 Identities=16% Similarity=0.180 Sum_probs=188.9
Q ss_pred eeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC--CCchHHHHHHHHHhhcCC---CceEEeCcHHHHHHH
Q 016612 13 LMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDKA---DRALCFTSGMAALAA 85 (386)
Q Consensus 13 ~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~ 85 (386)
.+++..+ ...+|..+|.+.++...... .. ..|+.. ..+.+.+++++++++++. +++++++||++|+.+
T Consensus 66 ylD~~~~~~~~~lGh~~p~v~~A~~~~~~---~~--~~~~~~~~~~~~~~~la~~l~~~~~~~~~~~v~~~~sGseA~~~ 140 (453)
T 4ffc_A 66 FIDLGAGIAVTTVGASHPAVAAAIADQAT---HF--THTCFMVTPYEQYVQVAELLNALTPGDHDKRTALFNSGAEAVEN 140 (453)
T ss_dssp EEESSHHHHTCTTCTTCHHHHHHHHHHHH---HC--SCCTTTTSCCHHHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHH
T ss_pred EEEcCCCcccCcCCCCCHHHHHHHHHHHH---hc--cccccCcCCCHHHHHHHHHHHHhCCCCCCcEEEEeCcHHHHHHH
Confidence 4555522 34577766665553221111 11 123332 345789999999999863 468888899999875
Q ss_pred HHH-hc--CCCCEEEecCCCCCcHHHHHhhhcc----------cCCcEEEEeCCC----C-------------HHHHHhh
Q 016612 86 VTH-LL--GTGEEIVAGDDLYGGTDRLLSRVTP----------KTGVVVKRVNTC----D-------------LDEVASA 135 (386)
Q Consensus 86 ~~~-~~--~~g~~Vlv~~~~~~~~~~~~~~~~~----------~~g~~~~~v~~~----d-------------~~~l~~~ 135 (386)
++. .. ..++.|++.++.|++.......+.. .....+..++.. | .+.+++.
T Consensus 141 alk~a~~~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~ 220 (453)
T 4ffc_A 141 AIKVARLATGRPAVVAFDNAYHGRTNLTMALTAKSMPYKSQFGPFAPEVYRMPASYPLRDEPGLTGEEAARRAISRIETQ 220 (453)
T ss_dssp HHHHHHHHHCCCEEEEETTCCCCSSHHHHHHCCCCTTTTTTSCSCCSSEEEECCCCTTTSCTTCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEcCccCCcchHHHhhcCCCcccccCCCCCCCCcEEeCCCccccCccccchHHHHHHHHHHHHHh
Confidence 443 22 3568899999999876433222211 111133334332 3 3566666
Q ss_pred hCC-CceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCccCC-----CCCCccEEEecccccccc
Q 016612 136 IGP-WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSRP-----LELGADIVMHSATKFIAG 204 (386)
Q Consensus 136 ~~~-~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~~-----~~~~~di~~~S~sK~~~g 204 (386)
+.+ ++++|+++..++..|.+.+ +++|.++|++||+++|+||+|.. +..... .....|++ ++||.+++
T Consensus 221 i~~~~~aavi~ep~~~~gG~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~g~~g~~~a~~~~~~~pdi~--t~sK~~~~ 298 (453)
T 4ffc_A 221 IGAQSLAAIIIEPIQGEGGFIVPAPGFLATLTAWASENGVVFIADEVQTGFARTGAWFASEHEGIVPDIV--TMAKGIAG 298 (453)
T ss_dssp TCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT
T ss_pred cCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecCccCCCcccccchhhhcCCCcchH--hhhhhhcC
Confidence 654 4555555555555556655 99999999999999999999862 222111 12234655 57899954
Q ss_pred CCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecCCC
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYAGL 282 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l 282 (386)
|+|+|+++++ +++.+.+.........+.++..++++...++.+. ...++..++.+.+.+.+++..
T Consensus 299 --G~~~G~~~~~-~~i~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~l~~~~---------- 365 (453)
T 4ffc_A 299 --GMPLSAVTGR-AELMDAVYAGGLGGTYGGNPVTCAAAVAALGVMRELDLPARARAIEASVTSRLSALA---------- 365 (453)
T ss_dssp --TSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH----------
T ss_pred --CcCeEEEEEC-HHHHhhhcccCcCCCCCcCHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHH----------
Confidence 6899999886 5565544333333334556666666555544221 112333344444444444320
Q ss_pred CCCCchhhhhhccCCCCceEEEEe-------CCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcC
Q 016612 283 PEHPGHELHYSQAKGAGSVLSFLT-------GSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARG 355 (386)
Q Consensus 283 ~~~~~~~i~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~ 355 (386)
..++.. ...++.|.++++.+ ++.....++.+.+...|+.+.+++.
T Consensus 366 ~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~~------------------------ 417 (453)
T 4ffc_A 366 EEVDII----GEVRGRGAMLAIEIVKPGTLEPDAALTKSIAAEALSQGVLILTCGT------------------------ 417 (453)
T ss_dssp HHCSSE----EEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHHTTEECCEECT------------------------
T ss_pred hhCCCe----EEEEeeceEEEEEEecCcccCCCHHHHHHHHHHHHhCCCEEecCCC------------------------
Confidence 000110 11244578888887 3445577888888888887765432
Q ss_pred CCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 356 LTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 356 ~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
..+++|++++ .+++++.++.|++++++
T Consensus 418 -~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 448 (453)
T 4ffc_A 418 -FGNVIRLLPPLVIGDDLLDEGITALSDIIRA 448 (453)
T ss_dssp -TSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred -CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1356999865 47788888888888865
No 201
>3h7f_A Serine hydroxymethyltransferase 1; cytoplasm, one-carbon metabolism, pyridoxal phosphate, structural genomics; HET: LLP; 1.50A {Mycobacterium tuberculosis}
Probab=99.86 E-value=4.6e-20 Score=175.74 Aligned_cols=290 Identities=21% Similarity=0.151 Sum_probs=175.1
Q ss_pred HHHH-HHHHhhcCCCceEE-eCcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhh-hcccCCcEEEEeCC------C
Q 016612 58 DALE-SLLAKLDKADRALC-FTSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSR-VTPKTGVVVKRVNT------C 127 (386)
Q Consensus 58 ~~l~-~~l~~~~g~~~~i~-~~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~-~~~~~g~~~~~v~~------~ 127 (386)
+++. +++++++|.+...+ ++||++|+. ++.+++++||+|++++|.|+++...... .....+..++.++. .
T Consensus 93 e~~a~~~la~~~g~~~~~v~~~sGs~a~~~a~~~~~~~Gd~Vl~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 172 (447)
T 3h7f_A 93 ENLARDRAKALFGAEFANVQPHSGAQANAAVLHALMSPGERLLGLDLANGGHLTHGMRLNFSGKLYENGFYGVDPATHLI 172 (447)
T ss_dssp HHHHHHHHHHHHTCSEEECCCSSHHHHHHHHHHHHCCTTCEEEEECGGGTCCGGGTCTTSHHHHSSEEEEECCCTTTCSC
T ss_pred HHHHHHHHHHHcCCCceEEEeCCHHHHHHHHHHHhcCCCCEEEecCcccccccchhhhhhhcCCeeEEEEcCcCcccCCc
Confidence 4455 89999999986665 899998876 5667899999999999998773210000 01112234444442 3
Q ss_pred CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-----ccCCCCCCccEEEeccccc
Q 016612 128 DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LSRPLELGADIVMHSATKF 201 (386)
Q Consensus 128 d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-----~~~~~~~~~di~~~S~sK~ 201 (386)
|++++++.+. .++++|++++++||++. ++++|.++|+++|+++|+|++|+.+. ...+. .+.|++++|+||+
T Consensus 173 d~~~l~~~i~~~~~~~i~~~~~~~~~~~--~l~~i~~l~~~~g~lli~Dea~~~g~~~~g~~~~~~-~~~di~~~s~sK~ 249 (447)
T 3h7f_A 173 DMDAVRATALEFRPKVIIAGWSAYPRVL--DFAAFRSIADEVGAKLLVDMAHFAGLVAAGLHPSPV-PHADVVSTTVHKT 249 (447)
T ss_dssp CHHHHHHHHHHHCCSEEEEECSSCCSCC--CHHHHHHHHHHHTCEEEEECTTTHHHHHTTSSCCST-TTCSEEEEESSGG
T ss_pred CHHHHHHHHHhcCCeEEEEcCCCCCCcc--CHHHHHHHHHHcCCEEEEECCchhhhhcCCCCCCCC-CCCcEEEecCCcC
Confidence 8999999885 57899999999998876 99999999999999999999986432 22223 3679999999999
Q ss_pred cccCCCceEEEEEEcChhHHHHHHHhhhhcCCC-CChh-hHH--HHH-hcCC-cHHHHHHHHHHHHHHHHHHHhhCCCcc
Q 016612 202 IAGHSDVMAGVLAVKGERLAKELYFLQNAEGSG-LAPF-DCW--ICL-RGVK-TMALRVEKQQDNAQKIAEFLASHPRVK 275 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~--~~~-~~~~-~~~~~~~~~~~~~~~l~~~l~~~~~~~ 275 (386)
++|+ |+|++++++ ++.+.+.........+ .... ... +.. .... .+..+.++..++.+.+.+.|++..
T Consensus 250 l~G~---~gG~i~~~~-~~~~~l~~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~~--- 322 (447)
T 3h7f_A 250 LGGG---RSGLIVGKQ-QYAKAINSAVFPGQQGGPLMHVIAGKAVALKIAATPEFADRQRRTLSGARIIADRLMAPD--- 322 (447)
T ss_dssp GCCC---SCEEEEECG-GGHHHHHHHHTTTTCSSCCHHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHTSHH---
T ss_pred CCCC---CeEEEEECH-HHHHHHhhhcCCcccCCccHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHHhcc---
Confidence 9654 579999874 4555554433322222 1111 111 111 1222 344556667777777777776530
Q ss_pred eEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhc
Q 016612 276 KVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQAR 354 (386)
Q Consensus 276 ~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~ 354 (386)
...+++ .+.. ....+.++++.+... .....+.+.+...|+.++......-...|
T Consensus 323 -~~~~g~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~GI~v~~~~i~~~~~~p---------------- 377 (447)
T 3h7f_A 323 -VAKAGV------SVVS--GGTDVHLVLVDLRDSPLDGQAAEDLLHEVGITVNRNAVPNDPRPP---------------- 377 (447)
T ss_dssp -HHHTTC------EEGG--GSCSSSEEEEECTTSSCCHHHHHHHHHHTTEECBC--------------------------
T ss_pred -ccCCCe------EEec--CCCCCCEEEEEcCCCCCCHHHHHHHHHHCCeEEecccCCCCCCCC----------------
Confidence 000011 1111 012345667766321 12334444444556765521100000001
Q ss_pred CCCCCeEEEEec--------cCChHHHHHHHHHHHhc
Q 016612 355 GLTEDLVRISVG--------IEDVNDLISDLDKALRT 383 (386)
Q Consensus 355 ~~~~~~iRis~~--------~~~~~~~i~~l~~~l~~ 383 (386)
..++.+|++.. .++++++++.|.++|++
T Consensus 378 -~~~~~lRig~~~~~~~~~~~eei~~~~~~l~~~l~~ 413 (447)
T 3h7f_A 378 -MVTSGLRIGTPALATRGFGDTEFTEVADIIATALAT 413 (447)
T ss_dssp ----CEEEEECHHHHHHTCCHHHHHHHHHHHHHHHHS
T ss_pred -CCCCceeccCHHHhhCCCCHHHHHHHHHHHHHHHhc
Confidence 12466999863 37888888888888764
No 202
>2ez2_A Beta-tyrosinase, tyrosine phenol-lyase; PLP-dependent enzyme, pyridoxal-5'-phosphate, domain lyase; 1.85A {Citrobacter freundii} PDB: 2ez1_A 2vlf_A* 2vlh_A* 2yct_A* 1tpl_A 2tpl_A* 2ycn_A* 2yhk_A* 2ycp_A* 1c7g_A*
Probab=99.86 E-value=5.6e-20 Score=175.68 Aligned_cols=165 Identities=18% Similarity=0.167 Sum_probs=127.0
Q ss_pred CchHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCCCCEEEecCCCC-CcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 54 NPTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGTGEEIVAGDDLY-GGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~g~~Vlv~~~~~-~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
.+...++++.++++++.++.+++++|++|+. ++.+++++|| +++.+.| +++. ..+...|.+++.++.+
T Consensus 74 ~~~~~~l~~~la~~~~~~~~~~~~~gt~a~~~al~~l~~~gd--i~~~~~~~~~~~----~~~~~~G~~~~~v~~~~~~~ 147 (456)
T 2ez2_A 74 SENFYHLERTVQELFGFKHIVPTHQGRGAENLLSQLAIKPGQ--YVAGNMYFTTTR----YHQEKNGAVFVDIVRDEAHD 147 (456)
T ss_dssp CHHHHHHHHHHHHHHCCSEEEEESSHHHHHHHHHHHHCCTTC--EEEESSCCHHHH----HHHHHTTCEEEECBCGGGGC
T ss_pred ChhHHHHHHHHHHHhCCCcEEEeCCcHHHHHHHHHHhCCCCC--EeccccccchhH----HHHHHcCCEEEEeccccccc
Confidence 3567889999999999999999999999987 5556789999 7788888 5544 3445678888887542
Q ss_pred -----------CHHHHHhhhCCCc----eEEEEeCCCC-CCccccc---HHHHHHHHHHcCCEEEEeCCCCCC-------
Q 016612 128 -----------DLDEVASAIGPWT----KLVWVESPTN-PRQQICD---IRKIAEMAHAHGALLLVDNSIMSP------- 181 (386)
Q Consensus 128 -----------d~~~l~~~~~~~~----~~v~~~~~~n-ptG~~~~---l~~i~~la~~~~~~li~D~a~~~~------- 181 (386)
|+++|++++++++ ++|++++|+| |||.+.+ +++|.++|++||+++|+|++|+.|
T Consensus 148 ~~~~~~~~~~~d~~~l~~~i~~~t~~~~~~v~l~~p~n~ptG~~~~~~~l~~i~~la~~~~i~li~De~~~~g~~~~~~~ 227 (456)
T 2ez2_A 148 AGLNIAFKGDIDLKKLQKLIDEKGAENIAYICLAVTVNLAGGQPVSMANMRAVRELTEAHGIKVFYDATRCVENAYFIKE 227 (456)
T ss_dssp TTCCCSCTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHTTCCEEEECTTHHHHHHHHHH
T ss_pred ccccccccCCCCHHHHHHHHHhccccceeEEEEeccCCCCCCccCCHHHHHHHHHHHHHcCCeEEEEccccccccccccc
Confidence 7899999887555 8999999999 9999886 999999999999999999998763
Q ss_pred --C-cc-CC-------CCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh
Q 016612 182 --V-LS-RP-------LELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL 227 (386)
Q Consensus 182 --~-~~-~~-------~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~ 227 (386)
. +. .. .....|+++.|++|++ ++ | ++|+++++++++.+.+...
T Consensus 228 ~~~~~~g~~~~~~~~~~~~~~d~~~~S~kk~~-~~-~-~gG~~~~~~~~~~~~~~~~ 281 (456)
T 2ez2_A 228 QEQGFENKSIAEIVHEMFSYADGCTMSGKKDC-LV-N-IGGFLCMNDDEMFSSAKEL 281 (456)
T ss_dssp HSTTCTTSCHHHHHHHHHTTCSEEEEETTTTT-CC-S-SCEEEEESCHHHHHHHHHH
T ss_pred cccccCCcchhhhhhhhcccCCEEEEeCcccC-CC-C-ceeEEEECCHHHHHHHHHH
Confidence 1 11 11 0123688888888986 43 3 5899998656666555443
No 203
>3tfu_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; transferase, transferase-transferase inhibitor complex; HET: PL8; 1.94A {Mycobacterium tuberculosis} PDB: 3tft_A* 3bv0_A* 3lv2_A*
Probab=99.86 E-value=5.2e-22 Score=189.43 Aligned_cols=323 Identities=12% Similarity=0.071 Sum_probs=196.5
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLDKA--DRALCFTSGMAALAAVT 87 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~ 87 (386)
+.+++..+ ..++|..+|.+.++......+ .....++....+...+++++++++++. +++++++||++|+.+++
T Consensus 76 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~~---~~~~~~~~~~~~~~~~L~e~la~~~~~~~~~v~~~~sGseA~~~Al 152 (457)
T 3tfu_A 76 EVLDAMSSWWTAIHGHGHPALDQALTTQLRV---MNHVMFGGLTHEPAARLAKLLVDITPAGLDTVFFSDSGSVSVEVAA 152 (457)
T ss_dssp EEEETTHHHHTCTTCBTCHHHHHHHHHHHHH---CSCCCSSSEECHHHHHHHHHHHHHSSTTEEEEEEESSHHHHHHHHH
T ss_pred EEEECCCcHhhhccCCCCHHHHHHHHHHHHh---ccCccccccCCHHHHHHHHHHHHhCCCCcCEEEEeCcHHHHHHHHH
Confidence 45666522 456888676665542221111 111111222345788999999999954 47888889999987443
Q ss_pred -HhcC-------CC-CEEEecCCCCCcHHHHHhhhcc------------cCCcEEEEeCC-----CCHHHHHhhhC---C
Q 016612 88 -HLLG-------TG-EEIVAGDDLYGGTDRLLSRVTP------------KTGVVVKRVNT-----CDLDEVASAIG---P 138 (386)
Q Consensus 88 -~~~~-------~g-~~Vlv~~~~~~~~~~~~~~~~~------------~~g~~~~~v~~-----~d~~~l~~~~~---~ 138 (386)
.+.. +| +.|++.++.|++.......... ..+.....++. .|+++|++.++ +
T Consensus 153 k~a~~~~~~~g~~g~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~~le~~l~~~~~ 232 (457)
T 3tfu_A 153 KMALQYWRGRGLPGKRRLMTWRGGYHGDTFLAMSICDPHGGMHSLWTDVLAAQVFAPQVPRDYDPAYSAAFEAQLAQHAG 232 (457)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHTTSCCC----------CCCCEEECCCCSSCCHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHhcCCCCCceEEEEcCCcCCccHHhhcccCCcccccccccCCCCCceEecCCCcccCHHHHHHHHHHHHhCCC
Confidence 3332 44 5888888888765322111110 11222222221 27888998887 6
Q ss_pred CceEEEEeC-CCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCC
Q 016612 139 WTKLVWVES-PTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSD 207 (386)
Q Consensus 139 ~~~~v~~~~-~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g 207 (386)
++++|++++ ++|++|.+.+ +++|.++|++||+++|+||+|.. +.... ......|++ |+||.++| +.
T Consensus 233 ~~aavi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~gillI~DEv~~g~gr~G~~~a~~~~~~~pdii--t~sK~l~g-G~ 309 (457)
T 3tfu_A 233 ELAAVVVEPVVQGAGGMRFHDPRYLHDLRDICRRYEVLLIFDEIATGFGRTGALFAADHAGVSPDIM--CVGKALTG-GY 309 (457)
T ss_dssp GEEEEEECSSEECTTTCEECCTHHHHHHHHHHHHHTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGGGT-TS
T ss_pred CEEEEEEeCCCcCCCCcccCCHHHHHHHHHHHHHcCCEEEEEcCccCCccccchhHhHhcCCCceEE--EEChhhhC-CC
Confidence 789999999 9999999875 99999999999999999999862 22111 112346777 77999865 22
Q ss_pred ceEEEEEEcChhHHHHHHHh-----hhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHHHhhCCCcceEecC
Q 016612 208 VMAGVLAVKGERLAKELYFL-----QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEFLASHPRVKKVNYA 280 (386)
Q Consensus 208 ~~~G~i~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~l~~~~~~~~~~~~ 280 (386)
+++|+++++ +++.+.+... ......+.++..++++...++.+. ...++..+..+.+.+.+++..
T Consensus 310 ~~lG~v~~~-~~i~~~~~~~~~~~~~~~~t~~~n~~a~aaa~aaL~~~~~~~~~~~~~~~~~~l~~~L~~l~-------- 380 (457)
T 3tfu_A 310 LSLAATLCT-ADVAHTISAGAAGALMHGPTFMANPLACAVSVASVELLLGQDWRTRITELAAGLTAGLDTAR-------- 380 (457)
T ss_dssp SCCEEEEEE-HHHHHHHHHSSSCSCCCCCTTTTCHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHGGGG--------
T ss_pred cceEEEEEc-HHHHHHhhccCCCceeEecCCCcCHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHh--------
Confidence 579999987 5565555311 112223456666665555444221 112333444445555554321
Q ss_pred CCCCCCchhhhhhccCCCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCe
Q 016612 281 GLPEHPGHELHYSQAKGAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDL 360 (386)
Q Consensus 281 ~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 360 (386)
.+++. ...++.|.++++.+.+.....++.+.+...|+.+++. .++
T Consensus 381 ---~~~~v----~~vr~~G~~~~i~l~~~~~~~~~~~~l~~~Gv~v~~~----------------------------~~~ 425 (457)
T 3tfu_A 381 ---ALPAV----TDVRVCGAIGVIECDRPVDLAVATPAALDRGVWLRPF----------------------------RNL 425 (457)
T ss_dssp ---GSTTE----EEEEECSSCEEEEESSCCCHHHHHHHHHHTTEECCCB----------------------------TTE
T ss_pred ---cCCCe----eeeecCCeEEEEEECCcccHHHHHHHHHHCCeEEEec----------------------------CCE
Confidence 11111 1123467888998855433567777777778876542 234
Q ss_pred EEEEec----cCChHHHHHHHHHHHhcC
Q 016612 361 VRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 361 iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
+|++++ .++++++++.|++++++.
T Consensus 426 lRi~p~~~~t~eei~~~l~~L~~~l~~~ 453 (457)
T 3tfu_A 426 VYAMPPYICTPAEITQITSAMVEVARLV 453 (457)
T ss_dssp EEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 999854 488889999999888765
No 204
>4e1o_A HDC, histidine decarboxylase; lyase; HET: PLP PVH; 1.80A {Homo sapiens}
Probab=99.86 E-value=1.7e-20 Score=180.11 Aligned_cols=292 Identities=15% Similarity=0.133 Sum_probs=190.4
Q ss_pred CCccccCC-CC-chHHHHHHHHHhhcCCC------------ceEEeCcHHHHHH-HHHHhc-------------------
Q 016612 45 GPYDYTRS-GN-PTRDALESLLAKLDKAD------------RALCFTSGMAALA-AVTHLL------------------- 90 (386)
Q Consensus 45 ~~~~y~~~-g~-~~~~~l~~~l~~~~g~~------------~~i~~~~gt~al~-~~~~~~------------------- 90 (386)
....|... +. .+.+++.+++++++|.+ ..+++++||+++. ++++..
T Consensus 106 ~~~~~~~~p~~~~lE~~v~~~l~~l~g~~~~~~~~~~~~~~~g~~~~ggt~an~~al~~ar~~~~~~~~~~~~~~~~~~~ 185 (481)
T 4e1o_A 106 LGFTWASSPACTELEMNVMDWLAKMLGLPEHFLHHHPSSQGGGVLQSTVSESTLIALLAARKNKILEMKTSEPDADESSL 185 (481)
T ss_dssp CCSSTTTCHHHHHHHHHHHHHHHHHHTCCGGGCTTCTTCBCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHH
T ss_pred ccCCcCCCcHHHHHHHHHHHHHHHHhCCChhhhccccCCCCceEEeCchHHHHHHHHHHHHHHHHHHhhhcCcccccccc
Confidence 34445444 32 25667778888888876 3478888997754 444332
Q ss_pred CCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhCCC------ceEEEEeCCCCCCcccccHH
Q 016612 91 GTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 91 ~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~~~------~~~v~~~~~~nptG~~~~l~ 159 (386)
.+++.|++++..|.++... +...|.+++.++.+ |+++|+++++++ +.+|+++.++|++|.+.|++
T Consensus 186 ~~~~~v~~s~~~H~s~~~~----~~~~g~~~~~v~~~~~~~~d~~~Le~~i~~~~~~g~~~~~vv~~~~~t~~G~id~l~ 261 (481)
T 4e1o_A 186 NARLVAYASDQAHSSVEKA----GLISLVKMKFLPVDDNFSLRGEALQKAIEEDKQRGLVPVFVCATLGTTGVCAFDCLS 261 (481)
T ss_dssp HTTEEEEEETTSCHHHHHH----HHHHTCEEEEECCCTTSCCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHH
T ss_pred cCCeEEEEcCcchHHHHHH----HHhCCCceEEEEcCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEecCCCCCcCcCCHH
Confidence 2577899999999988644 34578899999864 899999998743 67888899999999999999
Q ss_pred HHHHHHHHcCCEEEEeCCCCCCCccCC----CCC---CccEEEeccccccccCCCceEEEEEEcChhHHHH-HH----Hh
Q 016612 160 KIAEMAHAHGALLLVDNSIMSPVLSRP----LEL---GADIVMHSATKFIAGHSDVMAGVLAVKGERLAKE-LY----FL 227 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~~~~~~~~~----~~~---~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~-~~----~~ 227 (386)
+|.++|++||+++++|++|+.+....+ ... .+|.++.++||++++|.| +|+++++++..... +. .+
T Consensus 262 ~I~~la~~~~~~lhvDaA~g~~~~~~~~~~~~~~gi~~aDsi~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl 339 (481)
T 4e1o_A 262 ELGPICAREGLWLHIDAAYAGTAFLCPEFRGFLKGIEYADSFTFNPSKWMMVHFD--CTGFWVKDKYKLQQTFSVNPIYL 339 (481)
T ss_dssp HHHHHHHHHTCEEEEECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESBHHHHHTTTCCCCGGG
T ss_pred HHHHHHHHcCCeEEeehhhHHHHHhChhhHHHhcCcccCCEEEEChHHhcCCCCc--eEEEEEeCHHHHHHHhcCCchhc
Confidence 999999999999999999986643211 112 359999999999998887 67777777654321 10 00
Q ss_pred hhh--------------cCCCCChhhHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhh
Q 016612 228 QNA--------------EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELH 291 (386)
Q Consensus 228 ~~~--------------~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~ 291 (386)
... .+........++.+. +.+.+..+.++..++++.+.+.+++.+.+ +++
T Consensus 340 ~~~~~~~~~~~~~~~~~~~r~~~~l~~~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~--------------~~~ 405 (481)
T 4e1o_A 340 RHANSGVATDFMHWQIPLSRRFRSVKLWFVIRSFGVKNLQAHVRHGTEMAKYFESLVRNDPSF--------------EIP 405 (481)
T ss_dssp CCTTTTTSCCGGGGSSSSCCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTE--------------ECC
T ss_pred cCcccCCCCCcccccccCCCCccHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCe--------------EEe
Confidence 000 011112233343333 22334556666777777888887765422 111
Q ss_pred hhccCCCCceEEEEeCC-HHhHHHHHhhcCcceecc-CCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-c-
Q 016612 292 YSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITV-SFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-I- 367 (386)
Q Consensus 292 ~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~-~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-~- 367 (386)
. +...++++|.+.+ .....++.+.+...|... .++.. .+..++|++++ .
T Consensus 406 ~---~~~~~~v~f~~~~~~~~~~~l~~~L~~~g~~~~~~~~~------------------------~g~~~lR~~~~~~~ 458 (481)
T 4e1o_A 406 A---KRHLGLVVFRLKGPNSLTENVLKEIAKAGRLFLIPATI------------------------QDKLIIRFTVTSQF 458 (481)
T ss_dssp S---CCCSSEEEEEESSCHHHHHHHHHHHHHHCSSBCEEEEE------------------------TTEEEEEEECCCTT
T ss_pred c---CCceeEEEEEeCCchHHHHHHHHHHHhCCeEEEEeeEE------------------------CCEEEEEEEeCCCC
Confidence 0 1235788988843 445667777776666432 11110 02356999975 2
Q ss_pred ---CChHHHHHHHHHHHhc
Q 016612 368 ---EDVNDLISDLDKALRT 383 (386)
Q Consensus 368 ---~~~~~~i~~l~~~l~~ 383 (386)
++++++++.|++.+++
T Consensus 459 tt~~di~~~~~~i~~~~~~ 477 (481)
T 4e1o_A 459 TTRDDILRDWNLIRDAATL 477 (481)
T ss_dssp CCHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHH
Confidence 5677777777776654
No 205
>3gju_A Putative aminotransferase; pyridoxal phosphate, PLP-dependent transferase-like fold, ST genomics, joint center for structural genomics, JCSG; HET: MSE LLP PLP; 1.55A {Mesorhizobium loti} PDB: 3fcr_A*
Probab=99.86 E-value=1.9e-20 Score=179.13 Aligned_cols=324 Identities=12% Similarity=0.050 Sum_probs=193.6
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDKA--DRALCFTSGMAALAA 85 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~ 85 (386)
+.+++..+ ...+|..+|.+.++...... ...+.|... + .+.+.+++++++++++. +++++++||++|+.+
T Consensus 52 ~~lD~~~~~~~~~lG~~~p~v~~A~~~~~~----~~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~gGseA~~~ 127 (460)
T 3gju_A 52 KSIDAFAGLYCVNVGYGRQKIADAIATQAK----NLAYYHAYVGHGTEASITLAKMIIDRAPKGMSRVYFGLSGSDANET 127 (460)
T ss_dssp EEEETTHHHHTCTTCBCCHHHHHHHHHHHH----HHSCCCCCTTCCCHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHH----hccccccccccCCHHHHHHHHHHHhhCCCCcCEEEEeCchHHHHHH
Confidence 34555522 24577666665553221111 112223333 2 35789999999998754 467888889999874
Q ss_pred HH-Hhc--------CCCCEEEecCCCCCcHHHHHhhh---------cccCCcEEEEeC--C----CC------------H
Q 016612 86 VT-HLL--------GTGEEIVAGDDLYGGTDRLLSRV---------TPKTGVVVKRVN--T----CD------------L 129 (386)
Q Consensus 86 ~~-~~~--------~~g~~Vlv~~~~~~~~~~~~~~~---------~~~~g~~~~~v~--~----~d------------~ 129 (386)
++ .++ .+++.|++.++.|+++....... .......+..++ . +| +
T Consensus 128 al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~g~~~~~~~~~~~ 207 (460)
T 3gju_A 128 NIKLIWYYNNVLGRPEKKKIISRWRGYHGSGVMTGSLTGLDLFHNAFDLPRAPVLHTEAPYYFRRTDRSMSEEQFSQHCA 207 (460)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHCCCGGGTTTTTCSCTTEEEECCCCGGGCSCTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCcCCCCHHHhhccCCcccccccCCCCCCCEEeCCCccccCCccccChhHHHHHHH
Confidence 43 343 35689999999997764322111 111112233333 2 22 6
Q ss_pred HHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCccC-----CCCCCccEEE
Q 016612 130 DEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVM 195 (386)
Q Consensus 130 ~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~~-----~~~~~~di~~ 195 (386)
++|++++. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+ .+.... ......|++
T Consensus 208 ~~le~~i~~~~~~~~aaii~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~llI~DEv~~g~gr~g~~~~~~~~~~~pdi~- 286 (460)
T 3gju_A 208 DKLEEMILAEGPETIAAFIGEPILGTGGIVPPPAGYWEKIQAVLKKYDVLLVADEVVTGFGRLGTMFGSDHYGIKPDLI- 286 (460)
T ss_dssp HHHHHHHHHHCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEE-
T ss_pred HHHHHHHHhcCCCCEEEEEECCccCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccCCCcccccchHhhcCCCCCee-
Confidence 88888875 57889999999999888765 9999999999999999999987 322211 112345666
Q ss_pred eccccccccCCCceEEEEEEcChhHHHHHHHh-------hhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHH
Q 016612 196 HSATKFIAGHSDVMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAE 266 (386)
Q Consensus 196 ~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~ 266 (386)
++||.+++ +++++|+++++ +++.+.+... ......+.++..++++...++.+. ...++..++.+.+.+
T Consensus 287 -t~sK~l~g-G~~~lg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~ 363 (460)
T 3gju_A 287 -TIAKGLTS-AYAPLSGVIVA-DRVWQVLVQGSDKLGSLGHGWTYSAHPICVAAGVANLELIDEMDLVTNAGETGAYFRA 363 (460)
T ss_dssp -EECGGGTT-TSSCCEEEEEE-HHHHHHHHHHHHHHCSCSCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred -eeehhhcC-CCCCeEEEEEC-HHHHHHHhcccccccccccCCCCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 56899865 22689999987 4565555321 222234556666666655554321 123334444444555
Q ss_pred HHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----------HhHHHHHhhcCcceeccCCCCccccc
Q 016612 267 FLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLI 335 (386)
Q Consensus 267 ~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~l~~~gi~~~~G~~~~~~ 335 (386)
.+.+. +..++.. ...++.+.++++.+... ....++.+.+...|+.+.+++
T Consensus 364 ~l~~~----------l~~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~~----- 424 (460)
T 3gju_A 364 ELAKA----------VGGHKNV----GEVRGDGMLAAVEFVADKDDRVFFDASQKIGPQVATALAASGVIGRAMP----- 424 (460)
T ss_dssp HHHHH----------HTTSTTE----EEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEECS-----
T ss_pred HHHHH----------HhcCCCe----EEEeeeeEEEEEEEccCccccccccchHHHHHHHHHHHHHCCeEEecCC-----
Confidence 44321 1111111 11234577888877421 125567777777788665432
Q ss_pred cccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 336 SMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 336 ~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.++++||+++ .++++++++.|++++++
T Consensus 425 ---------------------~~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 455 (460)
T 3gju_A 425 ---------------------QGDILGFAPPLCLTREQADIVVSKTADAVKS 455 (460)
T ss_dssp ---------------------SSCEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ---------------------CCCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 1356999954 48888888888888865
No 206
>3dod_A Adenosylmethionine-8-amino-7-oxononanoate aminotr; aminotransferase, biotin biosynthesis, pyridoxal phosphate, adenosyl-L-methionine; HET: PLP; 1.90A {Bacillus subtilis} SCOP: c.67.1.0 PDB: 3drd_A 3du4_A*
Probab=99.86 E-value=1.4e-21 Score=186.25 Aligned_cols=319 Identities=14% Similarity=0.124 Sum_probs=184.8
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC-C-CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G-NPTRDALESLLAKLDKA--DRALCFTSGMAALAA 85 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g-~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~ 85 (386)
+.+++..+ ..++|..+|.+.++...... ...+ |... + .+.+.+++++++++++. +++++++||++|+.+
T Consensus 45 ~ylD~~~~~~~~~lG~~~p~v~~A~~~~~~----~~~~-~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~ 119 (448)
T 3dod_A 45 EYYDGFSSVWLNVHGHRKKELDDAIKKQLG----KIAH-STLLGMTNVPATQLAETLIDISPKKLTRVFYSDSGAEAMEI 119 (448)
T ss_dssp EEEETTHHHHTCSSCBSCHHHHHHHHHHHT----TCSC-CCCSSSEEHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred EEEECCcchhhccCCCCCHHHHHHHHHHHH----hccC-ccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHH
Confidence 34555522 55678776666554222111 1111 2222 3 35789999999999853 478888889999874
Q ss_pred -HHHhcC----CC----CEEEecCCCCCcHHHHHhhhcc---------cCCcEEEEeCCC----------------CHHH
Q 016612 86 -VTHLLG----TG----EEIVAGDDLYGGTDRLLSRVTP---------KTGVVVKRVNTC----------------DLDE 131 (386)
Q Consensus 86 -~~~~~~----~g----~~Vlv~~~~~~~~~~~~~~~~~---------~~g~~~~~v~~~----------------d~~~ 131 (386)
+..+.. +| |+|++.++.|+++......... .....+..++.. |+++
T Consensus 120 al~~~~~~~~~~G~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ 199 (448)
T 3dod_A 120 ALKMAFQYWKNIGKPEKQKFIAMKNGYHGDTIGAVSVGSIELFHHVYGPLMFESYKAPIPYVYRSESGDPDECRDQCLRE 199 (448)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEEC-----------------------------CEEECCCCCTTSSSCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhCCCCCCEEEEECCCCCCccHHHHHhcCCccccccccCCCCCceEeCCCccccCCccchhhhhHHHHHH
Confidence 433433 44 9999999999776422111100 001123334433 2788
Q ss_pred HHhhhC---CCceEEEEeCCC-CCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEec
Q 016612 132 VASAIG---PWTKLVWVESPT-NPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHS 197 (386)
Q Consensus 132 l~~~~~---~~~~~v~~~~~~-nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S 197 (386)
|++.++ +++++|++++++ |++|.+.+ +++|.++|++||++||+||+|+. +... .......|++ +
T Consensus 200 le~~l~~~~~~~a~vi~ep~~~~~~G~~~~~~~~l~~l~~l~~~~~~~lI~DEv~~g~g~~g~~~a~~~~~~~~di~--t 277 (448)
T 3dod_A 200 LAQLLEEHHEEIAALSIESMVQGASGMIVMPEGYLAGVRELCTTYDVLMIVDEVATGFGRTGKMFACEHENVQPDLM--A 277 (448)
T ss_dssp HHHHHHHHGGGEEEEEEESSEESTTTCEECCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGTCCCSEE--E
T ss_pred HHHHHHhCCCCEEEEEEeCcccCCCCeecCCHHHHHHHHHHHHHhCCEEEEeccccCCCcccchhhhhhcCCCCCEE--E
Confidence 998886 567889899888 99998875 99999999999999999999872 2211 1112345665 5
Q ss_pred cccccccCCC-ceEEEEEEcChhHHHHHHH-------hhhhcCCCCChhhHHHHHhcCCcHH--HHHHHHHHHHHHHHHH
Q 016612 198 ATKFIAGHSD-VMAGVLAVKGERLAKELYF-------LQNAEGSGLAPFDCWICLRGVKTMA--LRVEKQQDNAQKIAEF 267 (386)
Q Consensus 198 ~sK~~~g~~g-~~~G~i~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~~ 267 (386)
+||.+++ | +++|+++++ +++.+.+.. .........++..+.++...++.+. ...++..++.+.+.+.
T Consensus 278 ~sK~l~~--G~~~ig~v~~~-~~~~~~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~~~~~ 354 (448)
T 3dod_A 278 AGKGITG--GYLPIAVTFAT-EDIYKAFYDDYENLKTFFHGHSYTGNQLGCAVALENLALFESENIVEQVAEKSKKLHFL 354 (448)
T ss_dssp ECGGGGT--TSSCCEEEEEE-HHHHHTTCSCGGGCCCCCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHH
T ss_pred ecccccC--CcCceEEEEEC-HHHHHHhhhccccCCcccccCCCCcCHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHH
Confidence 6899954 6 589999987 456554432 2222233456666666655554322 1233444455555555
Q ss_pred HhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCHH-----------hHHHHHhhcCcceeccCCCCcccccc
Q 016612 268 LASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSLA-----------LSKHVVETTKYFSITVSFGSVKSLIS 336 (386)
Q Consensus 268 l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~-----------~~~~l~~~l~~~gi~~~~G~~~~~~~ 336 (386)
+.+.. .++.. ...++.|.++++.+.... ....+.+.+...|+.+.+++
T Consensus 355 l~~l~-----------~~~~~----~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~~------ 413 (448)
T 3dod_A 355 LQDLH-----------ALPHV----GDIRQLGFMCGAELVRSKETKEPYPADRRIGYKVSLKMRELGMLTRPLG------ 413 (448)
T ss_dssp HHHHT-----------TSTTE----EEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECCEET------
T ss_pred HHHHh-----------cCCCe----EEEEeeeEEEEEEEccCcccccccchhhHHHHHHHHHHHHCCcEEeccC------
Confidence 54311 11111 112345778888874321 13566777777788665431
Q ss_pred ccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 337 MPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 337 ~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
+++|++++ .++++++++.|++++++
T Consensus 414 ----------------------~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 442 (448)
T 3dod_A 414 ----------------------DVIAFLPPLASTAEELSEMVAIMKQAIHE 442 (448)
T ss_dssp ----------------------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ----------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 34999754 47888888888888765
No 207
>3l44_A Glutamate-1-semialdehyde 2,1-aminomutase 1; alpha beta class, PLP-dependent transferase-like, bacillus A csgid, porphyrin biosynthesis; HET: LLP; 2.05A {Bacillus anthracis} SCOP: c.67.1.0
Probab=99.85 E-value=3.7e-21 Score=182.69 Aligned_cols=281 Identities=14% Similarity=0.111 Sum_probs=178.4
Q ss_pred CchHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHH-Hhc--CCCCEEEecCCCCCcHHHHHhhhcccCC-----------
Q 016612 54 NPTRDALESLLAKLD-KADRALCFTSGMAALAAVT-HLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTG----------- 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~-~~~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g----------- 118 (386)
.+...++++.+++++ +.++.++++||++++..++ .+. .++++|++.++.|+++.. ......|
T Consensus 94 ~~~~~~l~~~la~~~~~~~~v~~~~sGsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~---~~~~~~g~~~~~~~~~~~ 170 (434)
T 3l44_A 94 TALEVKFAKMLKEAMPALDKVRFVNSGTEAVMTTIRVARAYTGRTKIMKFAGCYHGHSD---LVLVAAGSGPSTLGTPDS 170 (434)
T ss_dssp CHHHHHHHHHHHHHCTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSG---GGGBC-------CCCBSS
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHHhhCCCEEEEEcCccCCCcH---HHHhhcCCcccccCCCCc
Confidence 356788888999988 4557888888999987443 333 377899999999877531 1111111
Q ss_pred --c------EEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCC--
Q 016612 119 --V------VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP-- 181 (386)
Q Consensus 119 --~------~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~-- 181 (386)
. ++..++..|++++++.++ +++++|++++++|++|.+.+ +++|.++|++||++||+||+|...
T Consensus 171 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~illI~DEv~~g~~~ 250 (434)
T 3l44_A 171 AGVPQSIAQEVITVPFNNVETLKEALDKWGHEVAAILVEPIVGNFGIVEPKPGFLEKVNELVHEAGALVIYDEVITAFRF 250 (434)
T ss_dssp TTCCHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHTTTCEEEEECTTTTTTS
T ss_pred CCCCCcCCCceEecCcccHHHHHHHHHhCCCCEEEEEEcCCCCCCCCccCCHHHHHHHHHHHHHcCCEEEEeccccceec
Confidence 1 455666679999998886 56788888888888888887 999999999999999999999732
Q ss_pred -Ccc--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh---hhhcCCCCChhhHHHHHhcCCcH--HHH
Q 016612 182 -VLS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL---QNAEGSGLAPFDCWICLRGVKTM--ALR 253 (386)
Q Consensus 182 -~~~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~--~~~ 253 (386)
... .......|++ |+||.++ +|+|+|+++++ +++.+.+... ......+.++..+.++..+++.+ ...
T Consensus 251 g~~~~~~~~~~~~di~--t~sK~~~--~G~~iG~~~~~-~~i~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~ 325 (434)
T 3l44_A 251 MYGGAQDLLGVTPDLT--ALGKVIG--GGLPIGAYGGK-KEIMEQVAPLGPAYQAGTMAGNPASMASGIACLEVLQQEGL 325 (434)
T ss_dssp SSSCHHHHHTCCCSEE--EEEGGGG--TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTH
T ss_pred cccHHHHHcCCCCCee--ehhhhhc--CCcCeeeEEEc-HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHcccH
Confidence 111 1112345655 6789995 46899999886 5555433321 11222345555555554443321 122
Q ss_pred HHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------------CHHhHHHHHhhcC
Q 016612 254 VEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTK 320 (386)
Q Consensus 254 ~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~ 320 (386)
.++..++.+.+.+.+++... ..+.. ...++.+.++++.+. +.....++.+.+.
T Consensus 326 ~~~~~~~~~~l~~~L~~~~~----~~~~~----------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 391 (434)
T 3l44_A 326 YEKLDELGATLEKGILEQAA----KHNID----------ITLNRLKGALTVYFTTNTIEDYDAAQDTDGEMFGKFFKLML 391 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHH----HTTCC----------EEEEEETTEEEEEESSSCCCSHHHHHHSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH----hCCCC----------EEEEeeccEEEEEEecCcccchhhccccCHHHHHHHHHHHH
Confidence 34444555555555543210 00000 011345778888762 2334467777777
Q ss_pred cceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhc
Q 016612 321 YFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 321 ~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~ 383 (386)
..|+.++++.. +.+|+++ +.++++++++.|++++++
T Consensus 392 ~~Gv~v~~~~~---------------------------~~~rl~~~~t~e~i~~~l~~l~~~l~~ 429 (434)
T 3l44_A 392 QEGVNLAPSKY---------------------------EAWFLTTEHTKEDIEYTIEAVGRAFAA 429 (434)
T ss_dssp HTTEECCSSTT---------------------------CCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HCCeEEeecCC---------------------------CcEEEecccCHHHHHHHHHHHHHHHHH
Confidence 78887766532 2377765 358888999999888864
No 208
>2okj_A Glutamate decarboxylase 1; PLP-dependent decarboxylase, lyase; HET: LLP PLZ; 2.30A {Homo sapiens} PDB: 2okk_A*
Probab=99.85 E-value=2.8e-20 Score=179.92 Aligned_cols=163 Identities=12% Similarity=0.053 Sum_probs=125.2
Q ss_pred hHHHHHHHHHhhcCCC----ceEEeCcHHHHHH-HHHHhc--------CCC-----C-EEEecCCCCCcHHHHHhhhccc
Q 016612 56 TRDALESLLAKLDKAD----RALCFTSGMAALA-AVTHLL--------GTG-----E-EIVAGDDLYGGTDRLLSRVTPK 116 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~----~~i~~~~gt~al~-~~~~~~--------~~g-----~-~Vlv~~~~~~~~~~~~~~~~~~ 116 (386)
+.+++.+++++++|.+ ..+++++||+|+. ++.++. ++| + .|+++++.|+++...+.. ..
T Consensus 133 le~~~~~~la~~~g~~~~~~~~~~t~ggtea~~~al~~~~~~~~~~~~~~G~~~~~~~~v~~s~~~h~s~~~~~~~-~g- 210 (504)
T 2okj_A 133 MEQITLKKMREIVGWSSKDGDGIFSPGGAISNMYSIMAARYKYFPEVKTKGMAAVPKLVLFTSEQSHYSIKKAGAA-LG- 210 (504)
T ss_dssp HHHHHHHHHHHHHTCCSSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHHHH-TT-
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEeCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCcchHHHHHHHHH-cC-
Confidence 3566778889999875 4677788888875 444432 256 6 789999999998755432 21
Q ss_pred CCc-EEEEeCCC-----CHHHHHhhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc
Q 016612 117 TGV-VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS 184 (386)
Q Consensus 117 ~g~-~~~~v~~~-----d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~ 184 (386)
.|. +++.++.+ |+++|++++++ ++++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+...
T Consensus 211 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~V~~~~~~~~tG~i~~l~~I~~la~~~g~~lhvD~a~~~~~~~ 290 (504)
T 2okj_A 211 FGTDNVILIKCNERGKIIPADFEAKILEAKQKGYVPFYVNATAGTTVYGAFDPIQEIADICEKYNLWLHVDAAWGGGLLM 290 (504)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEECBSCSSSCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred CCcccEEEEecCCCCCCCHHHHHHHHHHHHHCCCCceEEEEeCCCCCCCCcCCHHHHHHHHHHcCCEEEEehhhhhHHHh
Confidence 233 77778764 89999998874 5899999999999999999999999999999999999999876543
Q ss_pred C-----CCC--CCccEEEeccccccccCCCceEEEEEEcChhHHH
Q 016612 185 R-----PLE--LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAK 222 (386)
Q Consensus 185 ~-----~~~--~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~ 222 (386)
. ... .++|+++.|+||++++|.+ +|+++++++.+.+
T Consensus 291 ~~~~~~~~~g~~~~D~i~~~~hK~~~~p~~--~g~l~~~~~~~~~ 333 (504)
T 2okj_A 291 SRKHRHKLNGIERANSVTWNPHKMMGVLLQ--CSAILVKEKGILQ 333 (504)
T ss_dssp CTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESSTTHHH
T ss_pred CHhhHhhcCCcccCCEEEECchhhcCCCcc--eEEEEEECHHHHH
Confidence 1 111 2689999999999987754 7999998765443
No 209
>1wyu_A Glycine dehydrogenase (decarboxylating) subunit 1; alpha(2)beta(2) tetramer, riken structural genomics/proteomi initiative, RSGI; HET: PLP; 2.10A {Thermus thermophilus} SCOP: c.67.1.7 PDB: 1wyt_A* 1wyv_A*
Probab=99.85 E-value=2.3e-20 Score=177.43 Aligned_cols=155 Identities=21% Similarity=0.224 Sum_probs=119.0
Q ss_pred hHHHHHHHHHhhcCCCc--eEEeCcHHHHHHH-HHH-hcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----
Q 016612 56 TRDALESLLAKLDKADR--ALCFTSGMAALAA-VTH-LLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC---- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~--~i~~~~gt~al~~-~~~-~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~---- 127 (386)
...++++++++++|.+. .+++++++.+..+ .++ .+++||+|+++++.|+++...+...++..|++++.++..
T Consensus 109 ~~~~~~~~la~~~g~~~~~i~~~~g~taa~ea~~~a~~~~~gd~Viv~~~~h~s~~~~~~~~a~~~G~~v~~v~~~~~~~ 188 (438)
T 1wyu_A 109 ATFEYQTMIAELAGLEIANASMYDGATALAEGVLLALRETGRMGVLVSQGVHPEYRAVLRAYLEAVGAKLLTLPLEGGRT 188 (438)
T ss_dssp HHHHHHHHHHHHHTSSEECSCBSSHHHHHHHHHHHHHHHHTCCEEEEETTSCHHHHHHHHHHHHHTTCEEEEECCBTTBC
T ss_pred HHHHHHHHHHHHhCCCccceEEeCcHHHHHHHHHHHHhcCCCCEEEEcCccCHhHHHHHHHHHHHCCCEEEEEcCcCCcc
Confidence 57899999999999873 3555666644332 222 357899999999999999877777777789999999853
Q ss_pred CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCC-CCCCCccCCCCCCccEEEecccc-----c
Q 016612 128 DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS-IMSPVLSRPLELGADIVMHSATK-----F 201 (386)
Q Consensus 128 d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a-~~~~~~~~~~~~~~di~~~S~sK-----~ 201 (386)
|+++ ++++|++|++++| ||+|.+.|+++|.++|+++|+++++|.. ++.+.+..+...++|++++|.+| +
T Consensus 189 d~~~----i~~~t~~v~i~~p-n~tG~~~~l~~i~~la~~~g~~vivd~d~~a~g~~~~~~~~g~D~~~~s~kk~~~~~~ 263 (438)
T 1wyu_A 189 PLPE----VGEEVGAVVVQNP-NFLGALEDLGPFAEAAHGAGALFVAVADPLSLGVLKPPGAYGADIAVGDGQSLGLPMG 263 (438)
T ss_dssp CCCC----CCTTEEEEEEESS-CTTSBCCCHHHHHHHHHHTTCEEEEECCTTGGGTBCCHHHHTCSEEEEECTTTTCCCG
T ss_pred CHHH----hCCCeEEEEEECC-CCCeEEecHHHHHHHHHHcCCEEEEEechhhccCcCCCccCCCCEEEECCcccCCCcc
Confidence 3333 6778999999999 9999999999999999999999997744 44444433445688999999555 4
Q ss_pred cccCCCceEEEEEEcCh
Q 016612 202 IAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 202 ~~g~~g~~~G~i~~~~~ 218 (386)
++|| + +|+++++++
T Consensus 264 ~~Gp-~--~G~l~~~~~ 277 (438)
T 1wyu_A 264 FGGP-H--FGFLATKKA 277 (438)
T ss_dssp GGCS-C--CEEEEECGG
T ss_pred CCCC-C--eeEEEEcHH
Confidence 5555 3 799998754
No 210
>2jis_A Cysteine sulfinic acid decarboxylase; pyridoxal phosphate, alternative splicing, pyridoxal phosphate (PLP), structural genomics consortium (SGC); HET: PLP; 1.6A {Homo sapiens}
Probab=99.85 E-value=4.4e-20 Score=178.93 Aligned_cols=160 Identities=20% Similarity=0.177 Sum_probs=126.2
Q ss_pred hHHHHHHHHHhhcCCC--ceEEeCcHHHHHH-HHHHhc-------C-CCC------EEEecCCCCCcHHHHHhhhcccCC
Q 016612 56 TRDALESLLAKLDKAD--RALCFTSGMAALA-AVTHLL-------G-TGE------EIVAGDDLYGGTDRLLSRVTPKTG 118 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~~~gt~al~-~~~~~~-------~-~g~------~Vlv~~~~~~~~~~~~~~~~~~~g 118 (386)
+.+++++++++++|.+ +.+++++||+|+. ++..+. + +|+ .|+++++.|+++...+ +..|
T Consensus 149 le~~~~~~la~l~g~~~~~~~~t~ggtea~~~al~~ar~~~~~~~~~~G~~~~~~~~vl~s~~~h~s~~~~~----~~~g 224 (515)
T 2jis_A 149 MEEEVLRKLRALVGWSSGDGIFCPGGSISNMYAVNLARYQRYPDCKQRGLRTLPPLALFTSKECHYSIQKGA----AFLG 224 (515)
T ss_dssp HHHHHHHHHHHHHTCSSCEEEEESSHHHHHHHHHHHHHHHHCTTHHHHCGGGSCCEEEEEETTSCTHHHHHH----HHTT
T ss_pred HHHHHHHHHHHHhCCCCCCeEEcCCcHHHHHHHHHHHHHHHhhHHhhcCccccCCeEEEECCCccHHHHHHH----HHcC
Confidence 4677888999999986 5777788888865 343332 2 575 8999999999887544 3334
Q ss_pred c---EEEEeCCC-----CHHHHHhhhCC------CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc
Q 016612 119 V---VVKRVNTC-----DLDEVASAIGP------WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS 184 (386)
Q Consensus 119 ~---~~~~v~~~-----d~~~l~~~~~~------~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~ 184 (386)
. +++.++.+ |+++|++++++ ++++|++++++|++|.+.|+++|.++|+++|+++++|++|+.+...
T Consensus 225 ~g~~~v~~v~~~~~~~~d~~~L~~~i~~~~~~g~~~~~Vv~~~~~n~tG~i~~l~~I~~la~~~g~~l~vD~a~~~~~~~ 304 (515)
T 2jis_A 225 LGTDSVRVVKADERGKMVPEDLERQIGMAEAEGAVPFLVSATSGTTVLGAFDPLEAIADVCQRHGLWLHVDAAWGGSVLL 304 (515)
T ss_dssp SCGGGEEEECBCTTSCBCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHHTCEEEEEETTGGGGGG
T ss_pred CCCCcEEEEecCCCCcCCHHHHHHHHHHHHhCCCCcEEEEEeCCCCCCCCccCHHHHHHHHHHcCCeEEEehhhhhHHHh
Confidence 4 77888764 89999998864 4899999999999999999999999999999999999999876654
Q ss_pred CC-----C-CC-CccEEEeccccccccCCCceEEEEEEcCh-hHH
Q 016612 185 RP-----L-EL-GADIVMHSATKFIAGHSDVMAGVLAVKGE-RLA 221 (386)
Q Consensus 185 ~~-----~-~~-~~di~~~S~sK~~~g~~g~~~G~i~~~~~-~~~ 221 (386)
.+ . .. ++|++++|+||++++|.| +|+++++++ .+.
T Consensus 305 ~~~~~~~~~g~~~aD~v~~s~hK~l~~p~g--~G~l~~~~~~~~~ 347 (515)
T 2jis_A 305 SQTHRHLLDGIQRADSVAWNPHKLLAAGLQ--CSALLLQDTSNLL 347 (515)
T ss_dssp CTTTGGGGTTGGGCSEEEECTTSTTCCCSC--CEEEEESCCSCHH
T ss_pred ChhhHhhcCCCccCCEEEECcccccCCCCC--eeEEEEeChHHHH
Confidence 22 1 22 789999999999987765 799998876 443
No 211
>3e77_A Phosphoserine aminotransferase; SERC, PLP, structural genomi structural genomics consortium, SGC, amino-acid biosynthesi aminotransferase; HET: PLP; 2.50A {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=174.24 Aligned_cols=278 Identities=17% Similarity=0.141 Sum_probs=177.6
Q ss_pred hHHHHHHHHHhhcCCC--ceEEe-C-cHHHHHH-HHHHhcCC--CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-
Q 016612 56 TRDALESLLAKLDKAD--RALCF-T-SGMAALA-AVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~-~-~gt~al~-~~~~~~~~--g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~- 127 (386)
..+++++.+++++|.+ +.+++ + +||++++ ++..++.+ ||+|++...++.+. .|...++..|..++.++.+
T Consensus 59 ~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~a~~~l~~~~~Gd~v~~~~~g~~~~--~~~~~a~~~G~~~~~~~~~~ 136 (377)
T 3e77_A 59 IINNTENLVRELLAVPDNYKVIFLQGGGCGQFSAVPLNLIGLKAGRCADYVVTGAWSA--KAAEEAKKFGTINIVHPKLG 136 (377)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHGGGSTTCEEEECCCSHHHH--HHHHHHTTTSEEEECSCCCS
T ss_pred HHHHHHHHHHHHhCCCCCCeEEEEcCchHHHHHHHHHhccCCCCCCeEEEEECCHHHH--HHHHHHHHhCCceEEeccCC
Confidence 5788899999999986 34544 4 5679997 45667754 99998777766554 3457788899888776653
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEecccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSATKFI 202 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~sK~~ 202 (386)
++++++..+++++++|.+++.+|.||.+.|+ +|+++|+++++|.+++.|..+ +..+++ ++++|.+|++
T Consensus 137 ~~~~~~~~~~~~i~~~t~lV~~~h~et~tG~~~pi-----i~~~~~~~~~vD~~q~~g~~~id~~~~~--~~~~s~~K~~ 209 (377)
T 3e77_A 137 SYTKIPDPSTWNLNPDASYVYYCANETVHGVEFDF-----IPDVKGAVLVCDMSSNFLSKPVDVSKFG--VIFAGAQKNV 209 (377)
T ss_dssp SSCSCCCGGGCCCCTTCSCEEEESEETTTTEECSS-----CCCCTTCCEEEECTTTTTSSCCCGGGCS--EEEEEGGGTT
T ss_pred CcCCCCChHHhccCCCccEEEEeCccCchheEchh-----hhccCCCEEEEEcccccCCCCCchhhcC--EEEEeccccc
Confidence 5667777788899999999999999999998 477899999999999998865 333344 6889999999
Q ss_pred ccCCCceEEEEEEcChhHHH-------HH--HHhh-hhcCCCCCh-hhHHHHHhcCCc------HHHHHHHHHHHHHHHH
Q 016612 203 AGHSDVMAGVLAVKGERLAK-------EL--YFLQ-NAEGSGLAP-FDCWICLRGVKT------MALRVEKQQDNAQKIA 265 (386)
Q Consensus 203 ~g~~g~~~G~i~~~~~~~~~-------~~--~~~~-~~~~~~~~~-~~~~~~~~~~~~------~~~~~~~~~~~~~~l~ 265 (386)
||+| .|+++++++.+.+ .+ .... .....+..+ ...+.+..+++. +..+.++..+..+.+.
T Consensus 210 -gp~G--~g~l~~~~~~l~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~GG~~~i~~~~~~l~~~l~ 286 (377)
T 3e77_A 210 -GSAG--VTVVIVRDDLLGFALRECPSVLEYKVQAGNSSLYNTPPCFSIYVMGLVLEWIKNNGGAAAMEKLSSIKSQTIY 286 (377)
T ss_dssp -SCTT--CEEEEEETTSCSCCCTTSCGGGCHHHHHTTTTCSSCCCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred -CCCc--cEEEEEcHHHHhhccCCCCchhhHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHH
Confidence 7888 6888888653211 00 0111 111112222 222222233322 3333444445555555
Q ss_pred HHHhhCCCcceEecCCCCCCCchhhhhhccCCCCc-eEEEEeCC----HHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 266 EFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGS-VLSFLTGS----LALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 266 ~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~-~~~~~~~~----~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
+.+++.+.+ .+....+..+++ +++|.+++ .+....+++.+..+|+.+..|..
T Consensus 287 ~~L~~~~g~--------------~~~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~l~~l~~~Gi~~~~g~~--------- 343 (377)
T 3e77_A 287 EIIDNSQGF--------------YVCPVEPQNRSKMNIPFRIGNAKGDDALEKRFLDKALELNMLSLKGHR--------- 343 (377)
T ss_dssp HHHHTSTTS--------------EECCSCGGGBCSSEEEEEESSTTCCHHHHHHHHHHHHHTTEESCBCCT---------
T ss_pred HHHHhcCCc--------------eecCCCHHHcCCcEEEEEcCCCCCchhHHHHHHHHHHHCCcEEeCCCC---------
Confidence 666554321 110001112334 58999865 33335677777677887766542
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHhcC
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALRTG 384 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~~~ 384 (386)
..+.+|+|+.. ++++.+++.|++.+++.
T Consensus 344 ----------------~~g~iRiS~~~~~t~edId~l~~al~~~~~~~ 375 (377)
T 3e77_A 344 ----------------SVGGIRASLYNAVTIEDVQKLAAFMKKFLEMH 375 (377)
T ss_dssp ----------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHHHH
T ss_pred ----------------cCCEEEEECCCCCCHHHHHHHHHHHHHHHHHc
Confidence 12349999964 66666666776666543
No 212
>2epj_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.70A {Aeropyrum pernix} PDB: 2zsl_A* 2zsm_A*
Probab=99.85 E-value=1.5e-20 Score=178.55 Aligned_cols=284 Identities=17% Similarity=0.174 Sum_probs=180.0
Q ss_pred CchHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHHHhhhc----------ccCCc
Q 016612 54 NPTRDALESLLAKLD-KADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV 119 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~~----------~~~g~ 119 (386)
.+.+.++++.+++++ +.++.++++||++|+.+++.+ +.+++.|++.++.|+++........ ...|+
T Consensus 95 ~~~~~~l~~~la~~~~~~~~v~~~~sgseA~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~ 174 (434)
T 2epj_A 95 GEAEVLLAEKILGYVKRGGMIRFVNSGTEATMTAIRLARGYTGRDLILKFDGCYHGSHDAVLVAAGSAAAHYGVPTSAGV 174 (434)
T ss_dssp CHHHHHHHHHHHHHHCTTCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSSGGGSEECC------CEESSTTC
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCeEEEEcCCcCCCCHHHHHhcCCCccccCCCCCCCC
Confidence 357889999999998 677888899999998754433 4566788888888877531100000 11243
Q ss_pred ------EEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCCccC-
Q 016612 120 ------VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR- 185 (386)
Q Consensus 120 ------~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~~~~- 185 (386)
++..++..|++++++.++ +++++|++++.+|++|.+.+ +++|.++|++||+++|+||+|+......
T Consensus 175 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~g~~lI~DEv~~g~~~g~~ 254 (434)
T 2epj_A 175 PEAVARLTLVTPYNDVEALERVFAEYGDRIAGVIVEPVIANAGVIPPRREFLAALQRLSRESGALLILDEVVTGFRLGLE 254 (434)
T ss_dssp CHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCSSSCBCCCHHHHHHHHHHHHHHTCEEEEEETTTTTTSSTT
T ss_pred CCcccCceEecCCCCHHHHHHHHHhCCCCEEEEEEeCCcCCCCccCCCHHHHHHHHHHHHHcCCEEEEEcchhceeCCcc
Confidence 355666679999998886 47888888888888999887 9999999999999999999998211111
Q ss_pred ----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---hhcCCCCChhhHHHHHhcCCcHHH--HHHH
Q 016612 186 ----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMAL--RVEK 256 (386)
Q Consensus 186 ----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 256 (386)
......|++ |+||++++ |+++|+++++ +++.+.+.... .......++..++++...++.+.. ..++
T Consensus 255 ~~~~~~~~~~di~--s~sK~l~~--G~~~G~v~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aa~~a~l~~~~~~~~~~~ 329 (434)
T 2epj_A 255 GAQGYFNIEGDII--VLGKIIGG--GFPVGAVAGS-REVMSLLTPQGKVFNAGTFNAHPITMAAGLATLKALEEEPVYSV 329 (434)
T ss_dssp HHHHHHTCCCSEE--EEEGGGGT--TSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHHHSCHHHH
T ss_pred hhhHHhCCCCCee--eecchhcC--Ccceeeeeec-HHHHHhhccCCCcccCCCCCcCHHHHHHHHHHHHHHHhcCHHHH
Confidence 112346765 77899964 6889999987 44544333211 111224555565555554443321 2233
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-------------HHhHHHHHhhcCcce
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------LALSKHVVETTKYFS 323 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~~l~~~g 323 (386)
..++.+.+.+.+++... .. ++. ...++.+.++++.+.+ .....++.+.+...|
T Consensus 330 ~~~~~~~l~~~L~~~~~----~~-~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G 395 (434)
T 2epj_A 330 SREAAKALEEAASEVLD----RT-GLP---------YTINRVESMMQLFIGVEEVSNAAQARKADKKFYVKLHEEMLRRG 395 (434)
T ss_dssp HHHHHHHHHHHHHHHHH----HH-TCC---------EEEEEETTEEEEEETCSCCSSHHHHTTSCHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHh----hC-CCc---------EEEEEeeeEEEEEEeCCCcccchhccccCHHHHHHHHHHHHHCC
Confidence 44444444444443200 00 010 0113357888888854 234567888887889
Q ss_pred eccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhc
Q 016612 324 ITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 324 i~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~ 383 (386)
+.+.+|.. ..+|+++ +.++++++++.|++++++
T Consensus 396 v~v~~~~~---------------------------~~~~~~~~~t~e~i~~~l~~l~~~l~~ 430 (434)
T 2epj_A 396 VFIAPSNL---------------------------EAVFTGLPHQGEALEIAVEGLRSSLKT 430 (434)
T ss_dssp EECCSSTT---------------------------SCEECCTTCSHHHHHHHHHHHHHHHHH
T ss_pred eEEeccCC---------------------------CcEEEeccCCHHHHHHHHHHHHHHHHH
Confidence 88776542 1155554 348888888888888764
No 213
>3k40_A Aromatic-L-amino-acid decarboxylase; PLP dependent protein, alpha beta protein, alternative splicing, catecholamine biosynthesis, lyase; HET: LLP; 1.75A {Drosophila melanogaster} SCOP: c.67.1.6
Probab=99.84 E-value=2.3e-20 Score=178.80 Aligned_cols=282 Identities=14% Similarity=0.126 Sum_probs=182.8
Q ss_pred hHHHHHHHHHhhcCCC-----------ceEEeCcHHHHHH-HHHHhc-------------------CCCCEEEecCCCCC
Q 016612 56 TRDALESLLAKLDKAD-----------RALCFTSGMAALA-AVTHLL-------------------GTGEEIVAGDDLYG 104 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~-----------~~i~~~~gt~al~-~~~~~~-------------------~~g~~Vlv~~~~~~ 104 (386)
+.+++.+++++++|.+ ..+++++||++.. ++.+.. .+++.|+++...|.
T Consensus 114 lE~~v~~~l~~~~g~~~~~~~~~~~~~~gv~t~ggt~anl~al~~ar~~~~~~~~~~~~~~~~~~~~~~~~vi~s~~~H~ 193 (475)
T 3k40_A 114 LEVVMMDWLGKMLELPAEFLACSGGKGGGVIQGTASESTLVALLGAKAKKLKEVKELHPEWDEHTILGKLVGYCSDQAHS 193 (475)
T ss_dssp HHHHHHHHHHHHTTCCGGGCGGGTSSCEEEEESCHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHEEEEEETTSCH
T ss_pred HHHHHHHHHHHHhCCCchhccccCCCCCeEEcCchHHHHHHHHHHHHHHHHHHhhccCcccccccccCCeEEEECCCchH
Confidence 5666777888988877 3688889997753 443321 13468999999998
Q ss_pred cHHHHHhhhcccCCcEEEEeCCC----CHHHHHhhhCCC------ceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 105 GTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPW------TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 105 ~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~~~~~------~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
++.. .+...|++++.++.+ |+++|+++++++ +.+|+++.++|++|.+.|+++|.++|++||+++++
T Consensus 194 s~~~----~~~~~g~~~~~v~~d~~~~d~~~L~~~i~~~~~~~~~~~~v~~~~~~t~~G~~~~l~~I~~la~~~~~~lhv 269 (475)
T 3k40_A 194 SVER----AGLLGGVKLRSVQSENHRMRGAALEKAIEQDVAEGLIPFYAVVTLGTTNSCAFDYLDECGPVGNKHNLWIHV 269 (475)
T ss_dssp HHHH----HHHHHTCEEEEECCBTTBCCHHHHHHHHHHHHHTTCEEEEEEEEBSCTTTCCBCCHHHHHHHHHHTTCEEEE
T ss_pred HHHH----HHHHcCCceEEEECCCCCcCHHHHHHHHHHHHHCCCccEEEEEEecCCCCcCcCCHHHHHHHHHHhCCeEEE
Confidence 8864 444678899999874 899999998743 66788899999999999999999999999999999
Q ss_pred eCCCCCCCccCCC----C---CCccEEEeccccccccCCCceEEEEEEcChhH-HHHHHH----hhhh------------
Q 016612 175 DNSIMSPVLSRPL----E---LGADIVMHSATKFIAGHSDVMAGVLAVKGERL-AKELYF----LQNA------------ 230 (386)
Q Consensus 175 D~a~~~~~~~~~~----~---~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~-~~~~~~----~~~~------------ 230 (386)
|++|+.+....+. . ..+|.+++|+||++++|.| +|+++++++.. .+.+.. +...
T Consensus 270 D~A~~~~~~~~~~~~~~~~gi~~~Ds~~~~~hK~l~~p~g--~g~l~~~~~~~l~~~~~~~~~yl~~~~~~~~~~~~~~~ 347 (475)
T 3k40_A 270 DAAYAGSAFICPEYRHLMKGIESADSFNFNPHKWMLVNFD--CSAMWLKDPSWVVNAFNVDPLYLKHDMQGSAPDYRHWQ 347 (475)
T ss_dssp ECTTGGGGGGSGGGGGGGTTGGGCSEEEECHHHHSSCCSS--CEEEEESSGGGC--------------------------
T ss_pred eHHhHHHHHhCHhhHHHhcCcccCCEEEECchhccCCCCc--eEEEEEeCHHHHHHHhcCCccccCCCcCCCCCCccccc
Confidence 9999866432111 1 1469999999999988877 67888876644 221111 1000
Q ss_pred --cCCCCChhhHHHHHh--cCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe
Q 016612 231 --EGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 306 (386)
Q Consensus 231 --~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 306 (386)
.+........++.+. +...+..+.++..++++.+.+.+++.+.+ .++. +...++++|.+
T Consensus 348 ~~~sr~~~~l~l~~al~~~g~~g~~~~~~~~~~~a~~l~~~L~~~~g~--------------~l~~---~~~~~iv~f~~ 410 (475)
T 3k40_A 348 IPLGRRFRALKLWFVLRLYGVENLQAHIRRHCNFAKQFGDLCVADSRF--------------ELAA---EINMGLVCFRL 410 (475)
T ss_dssp -CCCGGGTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTE--------------EESS---CCBTTEEEEEE
T ss_pred ccCCCcccHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhcCCCE--------------EEec---CCceEEEEEEe
Confidence 000011222333322 22334555666777777888888776432 1111 11357888888
Q ss_pred C-CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec-c----CChHHHHHHHHHH
Q 016612 307 G-SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG-I----EDVNDLISDLDKA 380 (386)
Q Consensus 307 ~-~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~-~----~~~~~~i~~l~~~ 380 (386)
. ......++.+.+...|..... |... .+..++|++++ . ++++++++.|++.
T Consensus 411 ~~~~~~~~~l~~~L~~~g~~~~~---------~~~~--------------~g~~~lR~~~~~~~tt~~di~~~~~~i~~~ 467 (475)
T 3k40_A 411 KGSNERNEALLKRINGRGHIHLV---------PAKI--------------KDVYFLRMAICSRFTQSEDMEYSWKEVSAA 467 (475)
T ss_dssp SSCHHHHHHHHHHHHHHTSCBCE---------EEEE--------------TTEEEEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred CCchHHHHHHHHHHHhCCcEEEE---------eeEE--------------CCEEEEEEEeCCCCCCHHHHHHHHHHHHHH
Confidence 4 344466777777665543211 1000 02456999975 2 5677777777776
Q ss_pred Hhc
Q 016612 381 LRT 383 (386)
Q Consensus 381 l~~ 383 (386)
+++
T Consensus 468 ~~~ 470 (475)
T 3k40_A 468 ADE 470 (475)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 214
>3i5t_A Aminotransferase; pyridoxal 5'-phosphate, PSI-2, NYSGXRC, ST genomics, protein structure initiative; HET: PLP; 2.00A {Rhodobacter sphaeroides 2}
Probab=99.84 E-value=1.1e-20 Score=181.18 Aligned_cols=319 Identities=17% Similarity=0.166 Sum_probs=194.9
Q ss_pred eeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC-CCchHHHHHHHHHhhcC--CCceEEeCcHHHHHHHHH
Q 016612 13 LMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-GNPTRDALESLLAKLDK--ADRALCFTSGMAALAAVT 87 (386)
Q Consensus 13 ~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g~~~~~~l~~~l~~~~g--~~~~i~~~~gt~al~~~~ 87 (386)
.+++..+ ...+|..+|.+.++...... ...+.+.-. ..+.+.+++++++++++ .+.+++++||++|+..++
T Consensus 56 ylD~~s~~~~~~lGh~~p~v~~A~~~~l~----~~~~~~~~~~~~~~~~~la~~l~~~~~~~~~~v~~~~sGseA~~~Ai 131 (476)
T 3i5t_A 56 LIDGPAGMWCAQVGYGRREIVDAMAHQAM----VLPYASPWYMATSPAARLAEKIATLTPGDLNRIFFTTGGSTAVDSAL 131 (476)
T ss_dssp EEETTHHHHTCTTCBCCHHHHHHHHHHHH----HCCCCCTTTCBCHHHHHHHHHHHTTSSTTCCEEEEESSHHHHHHHHH
T ss_pred EEECCCchhhccCCCCCHHHHHHHHHHHH----hccCcccCccCCHHHHHHHHHHHhcCCCCcCEEEEeCchHHHHHHHH
Confidence 4555422 34577777666654222111 112222212 34589999999999985 457888899999987443
Q ss_pred H-hc--------CCCCEEEecCCCCCcHHHHHhhhcc-----------cCCcEEEEeCC-----C-C--------HHHHH
Q 016612 88 H-LL--------GTGEEIVAGDDLYGGTDRLLSRVTP-----------KTGVVVKRVNT-----C-D--------LDEVA 133 (386)
Q Consensus 88 ~-~~--------~~g~~Vlv~~~~~~~~~~~~~~~~~-----------~~g~~~~~v~~-----~-d--------~~~l~ 133 (386)
. +. ..++.|++.++.|+++......... ..+...+..+. . + +++|+
T Consensus 132 k~a~~~~~~~g~~~~~~vi~~~~~yHg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~le 211 (476)
T 3i5t_A 132 RFSEFYNNVLGRPQKKRIIVRYDGYHGSTALTAACTGRTGNWPNFDIAQDRISFLSSPNPRHAGNRSQEAFLDDLVQEFE 211 (476)
T ss_dssp HHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHTCCCGGGCTTSCCCCTTEEEECCCCGGGCTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCCCCEEEEEcCCcCcCChhhccccCChhhccccCCCCCCcEEeCCCcccccCCCchHHHHHHHHHHHH
Confidence 3 33 3467899999999876432211110 11223333222 1 1 77888
Q ss_pred hhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----C-CCCCCccEEEecc
Q 016612 134 SAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----R-PLELGADIVMHSA 198 (386)
Q Consensus 134 ~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~-~~~~~~di~~~S~ 198 (386)
+.+. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|+. +... . ......|+++ +
T Consensus 212 ~~i~~~~~~~~aavi~ep~~~~~G~~~~~~~~L~~l~~lc~~~gillI~DEv~~g~gr~G~~~~~~~~~~v~pdi~t--~ 289 (476)
T 3i5t_A 212 DRIESLGPDTIAAFLAEPILASGGVIIPPAGYHARFKAICEKHDILYISDEVVTGFGRCGEWFASEKVFGVVPDIIT--F 289 (476)
T ss_dssp HHHHHHCGGGEEEEEECSSBTTTTSBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHTTCCCCSEEE--E
T ss_pred HHHHhcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEecccCCccccCceeeecccCCCcchhh--h
Confidence 8875 56889999999999998665 99999999999999999999862 2221 1 2233467774 6
Q ss_pred ccccccCCC-ceEEEEEEcChhHHHHHHHh-------hhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHH
Q 016612 199 TKFIAGHSD-VMAGVLAVKGERLAKELYFL-------QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFL 268 (386)
Q Consensus 199 sK~~~g~~g-~~~G~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l 268 (386)
+|.+++ | +++|+++++ +++.+.+... ......+.++..+++++.+++.+.. ..++..++.+.+.+.+
T Consensus 290 sK~l~~--G~~plg~v~~~-~~i~~~~~~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~l~~~L 366 (476)
T 3i5t_A 290 AKGVTS--GYVPLGGLAIS-EAVLARISGENAKGSWFTNGYTYSNQPVACAAALANIELMEREGIVDQAREMADYFAAAL 366 (476)
T ss_dssp CGGGGT--TSSCCEEEEEC-HHHHHTTSGGGCTTCEECCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHH
T ss_pred hhhhcC--CCcCeEEEEEC-HHHHHHHhcCCcccccccccCCCCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 899965 6 789999986 5566544332 1223345566666666665543321 2334444555555555
Q ss_pred hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH-----------HhHHHHHhhcCcceeccCCCCccccccc
Q 016612 269 ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL-----------ALSKHVVETTKYFSITVSFGSVKSLISM 337 (386)
Q Consensus 269 ~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~-----------~~~~~l~~~l~~~gi~~~~G~~~~~~~~ 337 (386)
++. ..++... ..++.|.++.+.+... .....+.+.+...|+.+.+.
T Consensus 367 ~~l-----------~~~~~v~----~v~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~-------- 423 (476)
T 3i5t_A 367 ASL-----------RDLPGVA----ETRSVGLVGCVQCLLDPTRADGTAEDKAFTLKIDERCFELGLIVRPL-------- 423 (476)
T ss_dssp HTT-----------TTSTTEE----EEEEETTEEEEEECCC-----CCHHHHHHHHHHHHHHHHTTEECEEE--------
T ss_pred HHH-----------hcCCCeE----EEEecCceeEEEEecCccccccccchhHHHHHHHHHHHHCCCEEEec--------
Confidence 532 1222211 1245678888887432 13556777777778765431
Q ss_pred cccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 338 PCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 338 p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.+++||++. .++++++++.|++++++
T Consensus 424 --------------------g~~iRi~p~l~~t~e~i~~~l~~l~~~l~~ 453 (476)
T 3i5t_A 424 --------------------GDLCVISPPLIISRAQIDEMVAIMRQAITE 453 (476)
T ss_dssp --------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred --------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 145999854 48888888888888764
No 215
>4a6r_A Omega transaminase; transferase, PLP-binding enzyme, transaminase fold type I; HET: TA8; 1.35A {Chromobacterium violaceum} PDB: 4a6t_A* 4a6u_A 4a72_A* 4ah3_A*
Probab=99.84 E-value=1e-20 Score=180.98 Aligned_cols=283 Identities=14% Similarity=0.126 Sum_probs=176.4
Q ss_pred CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHH-HHHhcC--------CCCEEEecCCCCCcHHHHHhhhc--------
Q 016612 54 NPTRDALESLLAKLDKA--DRALCFTSGMAALAA-VTHLLG--------TGEEIVAGDDLYGGTDRLLSRVT-------- 114 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~-~~~~~~--------~g~~Vlv~~~~~~~~~~~~~~~~-------- 114 (386)
.+.+.+++++++++++. +++++++||++|+.. +..+++ +++.|++.+|.|+++........
T Consensus 93 ~~~~~~la~~l~~~~~~~~~~v~~~~ggseA~~~al~~~~~~~~~~g~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~ 172 (459)
T 4a6r_A 93 HPAVVELSSLLAEVTPAGFDRVFYTNSGSESVDTMIRMVRRYWDVQGKPEKKTLIGRWNGYHGSTIGGASLGGMKYMHEQ 172 (459)
T ss_dssp CHHHHHHHHHHHHHSCTTCCEEEEESSHHHHHHHHHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCTTTC--
T ss_pred CHHHHHHHHHHHHhCCCCCCEEEEeCchHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCcCCccHHHHhhcCChhhccc
Confidence 45789999999999854 477888889999874 444443 57899999999987643221211
Q ss_pred -ccC--CcEEEEeCC----C---C--------HHHHHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHc
Q 016612 115 -PKT--GVVVKRVNT----C---D--------LDEVASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAH 168 (386)
Q Consensus 115 -~~~--g~~~~~v~~----~---d--------~~~l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~ 168 (386)
... +...+.++. . | +++|++.+. +++++|+++++++++|.+.+ +++|.++|++|
T Consensus 173 ~~~~~~~~~~~~~p~~~~~~~~~d~~~~~~~~~~~le~~i~~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~ 252 (459)
T 4a6r_A 173 GDLPIPGMAHIEQPWWYKHGKDMTPDEFGVVAARWLEEKILEIGADKVAAFVGEPIQGAGGVIVPPATYWPEIERICRKY 252 (459)
T ss_dssp -CCSCSSEEEECCCCHHHHCTTCCHHHHHHHHHHHHHHHHHHHCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHT
T ss_pred cCCCCCCCEEeCCCccccCCcccCHHHHHHHHHHHHHHHHHHcCCCCEEEEEECCccCCCCcccCCHHHHHHHHHHHHHc
Confidence 111 223333222 1 2 788888775 46788888888888888776 99999999999
Q ss_pred CCEEEEeCCCCC-CCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHH---HhhhhcCCCCChhh
Q 016612 169 GALLLVDNSIMS-PVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY---FLQNAEGSGLAPFD 239 (386)
Q Consensus 169 ~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~---~~~~~~~~~~~~~~ 239 (386)
|+++|+||+|+. +.... ......|++ ++||.+++ +++++|+++++ +++.+.+. ........+.++..
T Consensus 253 ~~llI~DEv~~g~gr~G~~~~~~~~~~~pdi~--t~sK~l~g-g~~~lg~v~~~-~~i~~~~~~~~~~~~~~t~~~~~~~ 328 (459)
T 4a6r_A 253 DVLLVADEVICGFGRTGEWFGHQHFGFQPDLF--TAAKGLSS-GYLPIGAVFVG-KRVAEGLIAGGDFNHGFTYSGHPVC 328 (459)
T ss_dssp TCEEEEECTTTTTTTTSSSSHHHHHTCCCSEE--EECGGGGT-TSSCCEEEEEC-HHHHHHHHHHCTTHHHHHHCSCHHH
T ss_pred CCEEEEeccccCCCcccccchHhhcCCCCCee--ehhhhhcC-CCCCccceeeC-HHHHHHhhcCCCcccCCCCCCCHHH
Confidence 999999999862 22211 112345766 46899854 44789999986 55666554 22222223455666
Q ss_pred HHHHHhcCCcHH--HHHHHHH-HHHHHHHHHH-hhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-------
Q 016612 240 CWICLRGVKTMA--LRVEKQQ-DNAQKIAEFL-ASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS------- 308 (386)
Q Consensus 240 ~~~~~~~~~~~~--~~~~~~~-~~~~~l~~~l-~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------- 308 (386)
++++...++.+. ...++.. ++.+.+.+.+ +... .++.. ...++.|.++.+.+..
T Consensus 329 ~aaa~aal~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-----------~~~~~----~~~~~~g~~~~~~~~~~~~~~~~ 393 (459)
T 4a6r_A 329 AAVAHANVAALRDEGIVQRVKDDIGPYMQKRWRETFS-----------RFEHV----DDVRGVGMVQAFTLVKNKAKREL 393 (459)
T ss_dssp HHHHHHHHHHHHHTCHHHHHHHTHHHHHHHHHHHHHT-----------TCTTE----EEEEEETTEEEEEECSBTTTTBC
T ss_pred HHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHh-----------cCCCe----EEEEEEEEEEEEEEecCcccccc
Confidence 666555554321 1123333 4444555555 2211 11111 1113457788887732
Q ss_pred ----HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHH
Q 016612 309 ----LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKA 380 (386)
Q Consensus 309 ----~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~ 380 (386)
......+.+.+...|+.+.+++ +++||+++ .++++++++.|+++
T Consensus 394 ~~~~~~~~~~~~~~l~~~Gv~v~~~g----------------------------~~iRi~~~~~~t~e~i~~~l~~l~~~ 445 (459)
T 4a6r_A 394 FPDFGEIGTLCRDIFFRNNLIMRACG----------------------------DHIVSAPPLVMTRAEVDEMLAVAERC 445 (459)
T ss_dssp CSSTTHHHHHHHHHHHHTTEECEEET----------------------------TEEEECCCTTCCHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHCCeEEecCC----------------------------CEEEEECCCCCCHHHHHHHHHHHHHH
Confidence 1225667777777788665422 34999954 47888888888888
Q ss_pred Hhc
Q 016612 381 LRT 383 (386)
Q Consensus 381 l~~ 383 (386)
+++
T Consensus 446 l~~ 448 (459)
T 4a6r_A 446 LEE 448 (459)
T ss_dssp HHH
T ss_pred HHH
Confidence 765
No 216
>3fq8_A Glutamate-1-semialdehyde 2,1-aminomutase; drug resistance, microev0lution, integrated approach, chlorophyll biosynthesis; HET: PMP; 2.00A {Synechococcus elongatus pcc 6301} SCOP: c.67.1.4 PDB: 2hp1_A* 2hoz_A* 2hoy_A* 2hp2_A* 3fq7_A* 3usf_A* 2gsa_A* 3gsb_A* 4gsa_A* 3fqa_A* 2cfb_A*
Probab=99.84 E-value=6.4e-21 Score=180.68 Aligned_cols=285 Identities=14% Similarity=0.130 Sum_probs=176.1
Q ss_pred CCchHHHHHHHHHhhcC-CCceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhh----------cccCC
Q 016612 53 GNPTRDALESLLAKLDK-ADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRV----------TPKTG 118 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g-~~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~----------~~~~g 118 (386)
..+.+.+++++++++++ .++.++++||++++.+++. ....+++|++.++.|++........ ....+
T Consensus 90 ~~~~~~~la~~l~~~~~~~~~v~~~~ggsea~~~al~~a~~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~ 169 (427)
T 3fq8_A 90 PCALENVLAEMVNDAVPSIEMVRFVNSGTEACMAVLRIMRAYTGRDKIIKFEGCYHGHADMFLVKAGSGVATLGLPSSPG 169 (427)
T ss_dssp CCHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEEETCCCCSCGGGCSSCCTHHHHHTCCSCSS
T ss_pred CCHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCCHHHHHhcCCcccccCCCCCCC
Confidence 34578999999999885 4578888889999874442 2344578998888887642110000 00111
Q ss_pred c------EEEEeCCCCHHHHHhhhCC---CceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCC---C
Q 016612 119 V------VVKRVNTCDLDEVASAIGP---WTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSP---V 182 (386)
Q Consensus 119 ~------~~~~v~~~d~~~l~~~~~~---~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~---~ 182 (386)
. .+..++..|++++++.+++ ++++|++++++|++|.+.+ +++|.++|++||++||+||+|+.- .
T Consensus 170 ~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~~p~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~g~ 249 (427)
T 3fq8_A 170 VPKKTTANTLTTPYNDLEAVKALFAENPGEIAGVILEPIVGNSGFIVPDAGFLEGLREITLEHDALLVFDEVITGFRIAY 249 (427)
T ss_dssp SCHHHHTTEEEEETTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHTTCEEEEECTTTBTTTBT
T ss_pred CCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCcCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccccccCc
Confidence 1 2555666699999998863 7889999999999999988 999999999999999999999721 1
Q ss_pred cc--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---hhcCCCCChhhHHHHHhcCCcH--HHHHH
Q 016612 183 LS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTM--ALRVE 255 (386)
Q Consensus 183 ~~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 255 (386)
.. .......|++ |+||+++ +|+|+|+++++ +++.+.+.... .......++..++++...++.+ ....+
T Consensus 250 ~~~~~~~~~~~di~--t~sK~~~--~G~~~G~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~~~aa~~aal~~~~~~~~~~ 324 (427)
T 3fq8_A 250 GGVQEKFGVTPDLT--TLGKIIG--GGLPVGAYGGK-REIMQLVAPAGPMYQAGTLSGNPLAMTAGIKTLELLRQPGTYE 324 (427)
T ss_dssp THHHHHTTCCCSEE--EECGGGG--TTSSCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHHHTSTTHHH
T ss_pred chhhHhcCCCCChh--hhhhhhh--CCcceEEEEEc-HHHHHhhccCCCccccCCCCcCHHHHHHHHHHHHHHHhcCHHH
Confidence 11 1122345654 6789996 37899999886 55554333211 1112234565555555443211 22234
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-------------HHhHHHHHhhcCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------LALSKHVVETTKYF 322 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~~l~~~ 322 (386)
+..++.+.+.+.+++... .. .+. ...++.+.++++.+.. .....++.+.+...
T Consensus 325 ~~~~~~~~~~~~l~~~~~----~~-~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~ 390 (427)
T 3fq8_A 325 YLDQITKRLSDGLLAIAQ----ET-GHA---------ACGGQVSGMFGFFFTEGPVHNYEDAKKSDLQKFSRFHRGMLEQ 390 (427)
T ss_dssp HHHHHHHHHHHHHHHHHH----HT-TCC---------CEEEEETTEEEEESSSCCCCSHHHHTTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHH----hC-CCC---------eEEEEeeeEEEEEEecCccccccccccccHHHHHHHHHHHHHC
Confidence 445555555555543210 00 000 0113356777777632 22345677777777
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~ 383 (386)
|+.+.++.. ..+|++. +.++++++++.|++++++
T Consensus 391 Gi~v~~~~~---------------------------~r~~~~~~~t~e~i~~~l~~l~~~l~~ 426 (427)
T 3fq8_A 391 GIYLAPSQF---------------------------EAGFTSLAHTEEDIDATLAAARTVMSA 426 (427)
T ss_dssp TEECCSSTT---------------------------SCEECCTTCCHHHHHHHHHHHHHHHHH
T ss_pred CcEEecCCC---------------------------CCEEeeCcCCHHHHHHHHHHHHHHHHh
Confidence 887766542 1144443 348888999999888865
No 217
>1ax4_A Tryptophanase; tryptophan biosynthesis, tryptophan indole-lyase, pyridoxal 5'-phosphate, monovalent cation binding site; HET: LLP; 2.10A {Proteus vulgaris} SCOP: c.67.1.2
Probab=99.84 E-value=1.8e-19 Score=172.65 Aligned_cols=292 Identities=15% Similarity=0.108 Sum_probs=175.3
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcC----CCCE---EEecCCCCCcHHHHHhhhcccCCcEEEEeCC
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLG----TGEE---IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT 126 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~----~g~~---Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~ 126 (386)
+...++++.++++++.++.++++||++|+. ++..+++ +||+ |+++.+.|..+. ..+...|.+++.++.
T Consensus 76 ~~~~~l~~~la~~~~~~~v~~t~ggt~A~~~al~~~~~~~~~~Gd~~~~viv~~~~~~~~~----~~~~~~g~~~~~~~~ 151 (467)
T 1ax4_A 76 RNYYDLKDKAKELFNYDYIIPAHQGRGAENILFPVLLKYKQKEGKAKNPVFISNFHFDTTA----AHVELNGCKAINIVT 151 (467)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEESSHHHHHHHHHHHHHHHHHHTTCCSSCEEEESSCCHHHH----HHHHHTTCEEEECBC
T ss_pred ccHHHHHHHHHHHcCCCcEEEcCCcHHHHHHHHHHHHHhhccCCCccceEEEeccccchhh----HHHhccCCceecccc
Confidence 467788999999999888889999999987 4555677 9998 998855555544 233455666665421
Q ss_pred ---------------CCHHHHHhhhCC----CceEEEEeCCCCCC-ccccc---HHHHHHHHHHcCCEEEEeCCCCC---
Q 016612 127 ---------------CDLDEVASAIGP----WTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMS--- 180 (386)
Q Consensus 127 ---------------~d~~~l~~~~~~----~~~~v~~~~~~npt-G~~~~---l~~i~~la~~~~~~li~D~a~~~--- 180 (386)
.|+++|++++++ ++++|++++|+||+ |.+.+ +++|.++|++||++||+|+++..
T Consensus 152 ~~~~~~~~~~~~~~~~d~~~le~~i~~~~~~~~~~vi~~~~~np~gG~~~~~~~l~~i~~la~~~gi~li~De~~~~~~~ 231 (467)
T 1ax4_A 152 EKAFDSETYDDWKGDFDIKKLKENIAQHGADNIVAIVSTVTCNSAGGQPVSMSNLKEVYEIAKQHGIFVVMDSARFCENA 231 (467)
T ss_dssp GGGGCTTSCCTTTTCBCHHHHHHHHHHHCGGGEEEEEEESSBTTTTSBCCCHHHHHHHHHHHHHHTCCEEEECTTHHHHH
T ss_pred cccccccccCCcccccCHHHHHHHHHhcCCCCeeEEEEeccccCCCccCCChhHHHHHHHHHHHcCCEEEEEchhhhhcc
Confidence 278999998873 78999999999999 77754 78999999999999999998654
Q ss_pred --------CCccC-CCC------CCccEEEeccccccccCCCceEEEEEEcCh-hHHHHHHHhhhh-cC---C-CCChhh
Q 016612 181 --------PVLSR-PLE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE-RLAKELYFLQNA-EG---S-GLAPFD 239 (386)
Q Consensus 181 --------~~~~~-~~~------~~~di~~~S~sK~~~g~~g~~~G~i~~~~~-~~~~~~~~~~~~-~~---~-~~~~~~ 239 (386)
+.... ... ...|++++|+||+++.+. +|+++++++ ++.+.+...... .+ . ..+...
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~s~sK~~g~~~---Gg~~~~~d~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 308 (467)
T 1ax4_A 232 YFIKARDPKYKNATIKEVIFDMYKYADALTMSAKKDPLLNI---GGLVAIRDNEEIFTLARQRCVPMEGFVTYGGLAGRD 308 (467)
T ss_dssp HHHHHHCGGGTTCCHHHHHHHHGGGCSEEEEETTSTTCCSS---CEEEEESSCHHHHHHHHHHHHHHTCSTTTTTCCHHH
T ss_pred hhccccccccCCCchhhhhhhhccccceEEEeccccCCCCc---ceEEEeCCHHHHHHHHHhhccccccccccCCccchH
Confidence 12111 111 236888999999985432 588887745 565554433221 11 1 112111
Q ss_pred HHH---HHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEE-------eCC-
Q 016612 240 CWI---CLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFL-------TGS- 308 (386)
Q Consensus 240 ~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~-------~~~- 308 (386)
... .+..... ..+..+..++.+.+.+.|++. . ++-. . +..+.++++. +..
T Consensus 309 ~~a~~~~l~~~~~-~~~~~~~~~~~~~l~~~L~~~-~--------~~~~--------~-~~~~~~~~~~~~~~~~~~~~~ 369 (467)
T 1ax4_A 309 MAAMVQGLEEGTE-EEYLHYRIGQVKYLGDRLREA-G--------IPIQ--------Y-PTGGHAVFVDCKKLVPQIPGD 369 (467)
T ss_dssp HHHHHHHHHHTTC-HHHHHHHHHHHHHHHHHHHHT-T--------CCBC--------S-SCCSSEEEEESTTTCTTSCGG
T ss_pred HHHHHHHHHHhhh-hhHHHHHHHHHHHHHHHHHhC-C--------CCcc--------c-CCCceEEEEehhhhccccccC
Confidence 111 1111111 123334445666677777652 1 1100 0 1134556666 321
Q ss_pred HHhHHHHHhhc-CcceeccCC-CCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc-----CChHHHHHHHHHHH
Q 016612 309 LALSKHVVETT-KYFSITVSF-GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI-----EDVNDLISDLDKAL 381 (386)
Q Consensus 309 ~~~~~~l~~~l-~~~gi~~~~-G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~-----~~~~~~i~~l~~~l 381 (386)
......+.+.+ ...|+.+.+ |....-. .|.. ... .....+++|+|++. ++++++++.|++++
T Consensus 370 ~~~~~~l~~~L~~~~gv~v~~~g~~~~~~-~~~~----g~~------~~~~~~~iRls~~~~~~t~e~i~~~~~~l~~~~ 438 (467)
T 1ax4_A 370 QFPAQAVINALYLESGVRAVEIGSFLLGR-DPAT----GEQ------KHADMEFMRLTIARRVYTNDHMDYIADALIGLK 438 (467)
T ss_dssp GCHHHHHHHHHHHHHCEECEEESHHHHCB-CTTT----CSB------CCCSCCEEEEECCTTSSCHHHHHHHHHHHHTTH
T ss_pred CCCHHHHHHHHHHhcCceeeecCcccccc-cccc----ccc------cccccceEEEecccccCCHHHHHHHHHHHHHHH
Confidence 11356677777 777888776 4321000 0000 000 00024789999872 55666666666655
Q ss_pred hc
Q 016612 382 RT 383 (386)
Q Consensus 382 ~~ 383 (386)
++
T Consensus 439 ~~ 440 (467)
T 1ax4_A 439 EK 440 (467)
T ss_dssp HH
T ss_pred Hh
Confidence 43
No 218
>3k28_A Glutamate-1-semialdehyde 2,1-aminomutase 2; biosynthesis of cofactors, prosthetic groups, and carriers, csgid, cytoplasm, isomerase; HET: MSE PLP; 1.95A {Bacillus anthracis str} SCOP: c.67.1.4 PDB: 3bs8_A*
Probab=99.84 E-value=1.9e-20 Score=177.49 Aligned_cols=282 Identities=15% Similarity=0.109 Sum_probs=179.9
Q ss_pred CchHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHH-Hhc--CCCCEEEecCCCCCcHHHHHhhhcccCC-----------
Q 016612 54 NPTRDALESLLAKLD-KADRALCFTSGMAALAAVT-HLL--GTGEEIVAGDDLYGGTDRLLSRVTPKTG----------- 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~-~~~--~~g~~Vlv~~~~~~~~~~~~~~~~~~~g----------- 118 (386)
.+...++++.+++++ +.++.++++||++++..++ .+. .++++|++.++.|++... ......|
T Consensus 92 ~~~~~~l~~~la~~~~~~~~v~~~~~Gsea~~~ai~~a~~~~~~~~vi~~~~~yhg~~~---~~~~~~g~~~~~~~~~~~ 168 (429)
T 3k28_A 92 TEIENKLAKLVIERVPSIEIVRMVNSGTEATMSALRLARGYTGRNKILKFIGCYHGHGD---SLLIKAGSGVATLGLPDS 168 (429)
T ss_dssp CHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEEETCCCCSCG---GGCSSCCTTC-----CCC
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCChHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcH---HHHHhcCCcccccCCCCc
Confidence 356788888999887 5567888889999987443 333 367889998888876531 1111111
Q ss_pred --------cEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCCc
Q 016612 119 --------VVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVL 183 (386)
Q Consensus 119 --------~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~~ 183 (386)
.++..++..|++++++.+. +++++|++++++|++|.+.+ +++|.++|++||+++|+||+|..-..
T Consensus 169 ~~~~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l~~~~~~~li~DEv~~g~~~ 248 (429)
T 3k28_A 169 PGVPEGVAKNTITVAYNDLESVKYAFEQFGDDIACVIVEPVAGNMGVVPPQPGFLEGLREVTEQNGALLIFDEVMTGFRV 248 (429)
T ss_dssp TTCCHHHHTTEEEEETTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEECTTTTTTS
T ss_pred CCCCCcccCceeecCCCCHHHHHHHHHhCCCCEEEEEEcCCCCCCCcccCCHHHHHHHHHHHHHcCCEEEEecccccccc
Confidence 1345556668999998886 56788888888888888887 99999999999999999999963211
Q ss_pred c-----CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---hhcCCCCChhhHHHHHhcCCcH-HHHH
Q 016612 184 S-----RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTM-ALRV 254 (386)
Q Consensus 184 ~-----~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~-~~~~ 254 (386)
. .......|++ ++||.+++ |+++|+++++ +++.+.+.... .....+.++..++++..+++.. ....
T Consensus 249 g~~~~~~~~~~~~di~--t~sK~~~~--G~~iG~~~~~-~~~~~~~~~~~~~~~~~t~~~~~~a~aaa~aal~~~~~~~~ 323 (429)
T 3k28_A 249 AYNCGQGYYGVTPDLT--CLGKVIGG--GLPVGAYGGK-AEIMRQVAPSGPIYQAGTLSGNPLAMAAGYETLVQLTPESY 323 (429)
T ss_dssp STTHHHHHHTCCCSEE--EECGGGGT--TSCCEEEEEC-HHHHTTBTTTSSBCCCCTTTTCHHHHHHHHHHHHTCCHHHH
T ss_pred CcchHHHHhCCCCcee--hhhhhhcC--CCCeEEEEEc-HHHHhhhccCCCccccCCCCCChHHHHHHHHHHHHHHHHHH
Confidence 0 0112235665 57899953 6899999986 44554332211 1122345555555554443311 3444
Q ss_pred HHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------------CHHhHHHHHhhcCc
Q 016612 255 EKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKY 321 (386)
Q Consensus 255 ~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~ 321 (386)
++..++.+.+.+.|++... ..+... ..++.+.++++.+. +.....++.+.+..
T Consensus 324 ~~~~~~~~~l~~~L~~~~~----~~~~~~----------~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 389 (429)
T 3k28_A 324 VEFERKAEMLEAGLRKAAE----KHGIPH----------HINRAGSMIGIFFTDEPVINYDAAKSSNLQFFAAYYREMVE 389 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHH----HTTCCC----------EEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh----hCCCCE----------EEEeeccEEEEEEecCCcccccccccccHHHHHHHHHHHHH
Confidence 5556666666666654210 001111 11345677787762 22335677777777
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhcC
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~~ 384 (386)
.|+.+++++. +.+|+++ +.++++++++.|++++++.
T Consensus 390 ~Gv~v~~~~~---------------------------~~~r~~~~~t~e~i~~~l~~l~~~l~~~ 427 (429)
T 3k28_A 390 QGVFLPPSQF---------------------------EGLFLSTVHSDADIEATIAAAEIAMSKL 427 (429)
T ss_dssp TTEECCSSTT---------------------------SCBCCCTTCCHHHHHHHHHHHHHHHHTC
T ss_pred CCeEEecCCC---------------------------CCEEEECCCCHHHHHHHHHHHHHHHHHH
Confidence 8887766431 2366665 3588999999999998765
No 219
>4e77_A Glutamate-1-semialdehyde 2,1-aminomutase; structural genomics, center for structural genomics of infec diseases, csgid, porphyrin biosynthesis; 2.00A {Yersinia pestis}
Probab=99.83 E-value=1.6e-20 Score=178.08 Aligned_cols=284 Identities=14% Similarity=0.133 Sum_probs=174.2
Q ss_pred CchHHHHHHHHHhhcC-CCceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHh----------hhcccCC-
Q 016612 54 NPTRDALESLLAKLDK-ADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLS----------RVTPKTG- 118 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~g-~~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~----------~~~~~~g- 118 (386)
.+...++++.++++++ .++.++++||++++..++. ...+++.|++.++.|++...... ......+
T Consensus 92 ~~~~~~la~~l~~~~~~~~~v~~~~sGsea~~~al~~a~~~~~~~~ii~~~~~yhg~~~~~~~~~~~~~~~~~~~~~~~~ 171 (429)
T 4e77_A 92 TEMEVKMAQLVTDLVPTMDMVRMVNSGTEATMSAIRLARGYTGRDKIIKFEGCYHGHADCLLVKAGSGALTLGQPNSPGV 171 (429)
T ss_dssp CHHHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCC------------------CCCTTS
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEeCcHHHHHHHHHHHHHHhhCCCEEEEEcCccCCCChhhhhhcCCcccccCCCCcCCC
Confidence 3578889999999884 5578888999999874433 23466788988888877642100 0000111
Q ss_pred -----cEEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCC---CCCc
Q 016612 119 -----VVVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIM---SPVL 183 (386)
Q Consensus 119 -----~~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~---~~~~ 183 (386)
..+..++..|++++++.++ +++++|++++.++++|.+.+ +++|.++|++||++||+||+|+ .+..
T Consensus 172 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~g~~~~~~~~l~~l~~l~~~~~~lli~DEv~~g~r~g~~ 251 (429)
T 4e77_A 172 PTDFAKHTLTCTYNDLASVRQAFEQYPQEVACIIVEPVAGNMNCIPPLPEFLPGLRALCDEFGALLIIDEVMTGFRVALA 251 (429)
T ss_dssp CGGGGTTEEEECTTCHHHHHHHHHHSTTTEEEEEECSSBCTTSCBCCCTTHHHHHHHHHHHHTCEEEEEETTTBTTTBTT
T ss_pred CCccCCceeecCCCCHHHHHHHHHhcCCCEEEEEECCccCCCCCcCCCHHHHHHHHHHHHHcCCEEEEeccccCcccCcc
Confidence 2455566679999998886 46777777777777777777 9999999999999999999997 2221
Q ss_pred c--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---hhcCCCCChhhHHHHHhcCCcH--HHHHHH
Q 016612 184 S--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTM--ALRVEK 256 (386)
Q Consensus 184 ~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 256 (386)
. .......|++ |+||.++ +|+++|+++++ +++.+.+.... .......++..++++..+++.+ ....++
T Consensus 252 ~~~~~~~~~pdi~--t~sK~~~--~G~~~G~~~~~-~~~~~~l~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 326 (429)
T 4e77_A 252 GAQDYYHVIPDLT--CLGKIIG--GGMPVGAFGGR-REVMNALAPTGPVYQAGTLSGNPIAMAAGFACLTEISQVGVYET 326 (429)
T ss_dssp CHHHHTTCCCSEE--EEEGGGG--TTSCCEEEEEC-HHHHTTBTTTSSBCC--CCCCCHHHHHHHHHHHHHHTSTTHHHH
T ss_pred hHHHhcCCCCCee--eeccccc--CCCCeEEEEEC-HHHHHHhccCCCccccCCCCCCHHHHHHHHHHHHHHHhcCHHHH
Confidence 1 1122345665 7789996 36889999986 44554333211 1222345666665555444321 222344
Q ss_pred HHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH--------------HhHHHHHhhcCcc
Q 016612 257 QQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL--------------ALSKHVVETTKYF 322 (386)
Q Consensus 257 ~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~--------------~~~~~l~~~l~~~ 322 (386)
..++.+.+.+.+++... .. ++. ...++.+.++++.+.+. ....++.+.+...
T Consensus 327 ~~~~~~~l~~~L~~~~~----~~-~~~---------~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 392 (429)
T 4e77_A 327 LTELTDSLATGLRHAAK----EE-NIP---------LVVNHVGGMFGLFFTNADTVTCYQDVMNCDVERFKRFFHLMLEE 392 (429)
T ss_dssp HHHHHHHHHHHHHHHHH----HT-TCC---------CEEEEETTEEEEECCSSSCCCSHHHHHTSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHH----hC-CCc---------eEEEEeeeEEEEEEccCcccccccccccccHHHHHHHHHHHHHC
Confidence 44555555555543210 00 000 01134577888887432 3346777788778
Q ss_pred eeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhc
Q 016612 323 SITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRT 383 (386)
Q Consensus 323 gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~ 383 (386)
|+.++++.. ..+|++. +.++++++++.|++++++
T Consensus 393 Gi~v~~~~~---------------------------~~~~~~~~~t~e~i~~~l~~l~~~l~~ 428 (429)
T 4e77_A 393 GVYLAPSAF---------------------------EAGFMSLAHSNEDIQKTVNAARRCFAK 428 (429)
T ss_dssp TEECCSSTT---------------------------SCEECCTTCCHHHHHHHHHHHHHHHTT
T ss_pred CeEEeecCC---------------------------CCEEEeccCCHHHHHHHHHHHHHHHHh
Confidence 887776542 1155543 358888999999988865
No 220
>3hmu_A Aminotransferase, class III; structural genomics, pyridoxal phosphate, PSI-2, protein structure initiative; 2.10A {Silicibacter pomeroyi}
Probab=99.83 E-value=1e-20 Score=181.11 Aligned_cols=321 Identities=16% Similarity=0.099 Sum_probs=195.2
Q ss_pred eeeccCCC--CCCCCCcccceeeeeeeecCCCCCCCCccccCC--CCchHHHHHHHHHhhcCC--CceEEeCcHHHHHHH
Q 016612 12 LLMNFSNE--FDPYGALSTPLYQTATFKQPSATENGPYDYTRS--GNPTRDALESLLAKLDKA--DRALCFTSGMAALAA 85 (386)
Q Consensus 12 ~~~~~~~~--~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~--g~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~ 85 (386)
+.+++..+ ...+|..+|.+.++...... ...+.|... ..+.+.++++.++++++. +++++++||++|+.+
T Consensus 56 ~ylD~~s~~~~~~lGh~~p~v~~A~~~~~~----~~~~~~~~~~~~~~~~~~lae~l~~~~~~~~~~v~~~~sGseA~~~ 131 (472)
T 3hmu_A 56 EILDAMAGLWCVNIGYGRDELAEVAARQMR----ELPYYNTFFKTTHVPAIALAQKLAELAPGDLNHVFFAGGGSEANDT 131 (472)
T ss_dssp EEECTTHHHHTCTTCBCCHHHHHHHHHHHH----HCSCCCSSSSEECHHHHHHHHHHHHHSCTTEEEEEEESSHHHHHHH
T ss_pred EEEECCCchhhccCCCCCHHHHHHHHHHHH----hccccccccccCCHHHHHHHHHHHHhCCCCCCEEEEeCCHHHHHHH
Confidence 45565522 45588777776654222111 112123322 345788999999999864 467888899999874
Q ss_pred HHH-hcC--------CCCEEEecCCCCCcHHHHHhhhc---------c-cCCcEEEEeCC----C---C--------HHH
Q 016612 86 VTH-LLG--------TGEEIVAGDDLYGGTDRLLSRVT---------P-KTGVVVKRVNT----C---D--------LDE 131 (386)
Q Consensus 86 ~~~-~~~--------~g~~Vlv~~~~~~~~~~~~~~~~---------~-~~g~~~~~v~~----~---d--------~~~ 131 (386)
++. +.. +++.|++.++.|+++........ . ..+...+..+. . | +++
T Consensus 132 aik~a~~~~~~~g~~~~~~ii~~~~~yHg~t~~~~~~~~~~~~~~~~~~~~~~~~v~~p~~~~~~~~~~~~~~~~~~~~~ 211 (472)
T 3hmu_A 132 NIRMVRTYWQNKGQPEKTVIISRKNAYHGSTVASSALGGMAGMHAQSGLIPDVHHINQPNWWAEGGDMDPEEFGLARARE 211 (472)
T ss_dssp HHHHHHHHHHHTTCTTCCEEEEETTCCCCSSHHHHHHSCCHHHHHTTCCCSSEEEECCCCHHHHCTTCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCEEEEEcCcCCCccHHhhhccCChhhccccCCCCCcEEeCCCccccCCcccCHHHHHHHHHHH
Confidence 433 332 46889999999987632211111 1 11233333222 1 1 778
Q ss_pred HHhhhC----CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCccC-----CCCCCccEEEec
Q 016612 132 VASAIG----PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLSR-----PLELGADIVMHS 197 (386)
Q Consensus 132 l~~~~~----~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~~-----~~~~~~di~~~S 197 (386)
|++.++ +++++|+++++++++|.+.+ +++|.++|+++|+++|+||+|+. +.... ......|+++
T Consensus 212 le~~i~~~~~~~~aavi~epv~~~gG~~~~~~~~l~~l~~l~~~~gillI~DEv~~gfgr~G~~~a~~~~~v~pdi~t-- 289 (472)
T 3hmu_A 212 LEEAILELGENRVAAFIAEPVQGAGGVIVAPDSYWPEIQRICDKYDILLIADEVICGFGRTGNWFGTQTMGIRPHIMT-- 289 (472)
T ss_dssp HHHHHHHHCGGGEEEEEECSSBSTTTCBCCCTTHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSCHHHHHTCCCSEEE--
T ss_pred HHHHHHhcCCCCEEEEEEcCccCCCCcccCCHHHHHHHHHHHHHcCCEEEEEccccCCcccCccchhHHhCCCCceee--
Confidence 888775 56789999999999999886 99999999999999999999872 22211 1123467775
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHh--hhhcCCCCChhhHHHHHhcCCcHHH--HHHHHH-HHHHHHHHHHhhCC
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFL--QNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQ-DNAQKIAEFLASHP 272 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~l~~~l~~~~ 272 (386)
++|.++| +++++|+++++ +++.+.+... ......+.++..++++..+++.+.. ..++.. ++.+.+.+.|++..
T Consensus 290 ~sK~l~g-g~~plG~v~~~-~~i~~~~~~~~~~~~~t~~~np~a~aAa~aaL~~~~~~~~~~~~~~~~~~~l~~~L~~l~ 367 (472)
T 3hmu_A 290 IAKGLSS-GYAPIGGSIVC-DEVAHVIGKDEFNHGYTYSGHPVAAAVALENLRILEEENILDHVRNVAAPYLKEKWEALT 367 (472)
T ss_dssp ECGGGTT-TSSCCEEEEEE-HHHHHHHTTSCBCCCCTTTTCHHHHHHHHHHHHHHHHTTHHHHHHHTHHHHHHHHHHGGG
T ss_pred echhhhc-CCcceEEEEEC-HHHHHhcccCCccccCCCCCCHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899865 34788999986 5566555211 1222334566666666665543321 223334 44455555554321
Q ss_pred CcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC------------HHhHHHHHhhcCcceeccCCCCcccccccccc
Q 016612 273 RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS------------LALSKHVVETTKYFSITVSFGSVKSLISMPCF 340 (386)
Q Consensus 273 ~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~------------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~ 340 (386)
.++.. ...++.|.++.+.+.. ......+.+.+...|+.+++++
T Consensus 368 -----------~~~~v----~~vr~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gv~v~~~g---------- 422 (472)
T 3hmu_A 368 -----------DHPLV----GEAKIVGMMASIALTPNKASRAKFASEPGTIGYICRERCFANNLIMRHVG---------- 422 (472)
T ss_dssp -----------GSTTE----EEEEEETTEEEEEECSCGGGTCCBSSCTTHHHHHHHHHHHHTTBCCEEET----------
T ss_pred -----------cCCCe----EEEEecCceEEEEEecCccccccccchhHHHHHHHHHHHHHCCcEEEecC----------
Confidence 11111 1124567888888742 2235667777777787655321
Q ss_pred ccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 341 MSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 341 ~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
+++||++. .++++++++.|++++++
T Consensus 423 ------------------~~iRi~p~~~~t~e~i~~~l~~l~~~l~~ 451 (472)
T 3hmu_A 423 ------------------DRMIISPPLVITPAEIDEMFVRIRKSLDE 451 (472)
T ss_dssp ------------------TEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred ------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 45999954 48888888888888765
No 221
>2vyc_A Biodegradative arginine decarboxylase; pyridoxal phosphate, PLP-dependent E lyase, acid resistance; HET: LLP; 2.4A {Escherichia coli}
Probab=99.83 E-value=1.2e-19 Score=181.91 Aligned_cols=208 Identities=13% Similarity=0.066 Sum_probs=145.4
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...+.++.+++++|.++.+++++|+ +++. ++.++++|||+|++++++|.++... +...|++++.++..
T Consensus 206 ~v~~~ee~la~l~G~d~~i~~~~Gtt~a~~~~i~al~~~GD~Vlv~~~~h~s~~~~----~~~~G~~~v~v~~~~~~~g~ 281 (755)
T 2vyc_A 206 AFGESEKYAARVFGADRSWSVVVGTSGSNRTIMQACMTDNDVVVVDRNCHKSIEQG----LMLTGAKPVYMVPSRNRYGI 281 (755)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHHH----HHHHCCEEEEECCCBCTTSC
T ss_pred HHHHHHHHHHHHhCCCceEEECCcHHHHHHHHHHHhcCCCCEEEECCCchHHHHHH----HHHcCCEEEEEeCCCCcccc
Confidence 5788999999999999888888886 7776 5677899999999999999988654 34568888887642
Q ss_pred ---------CHHHHHhhhCC--Cce--------EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc----
Q 016612 128 ---------DLDEVASAIGP--WTK--------LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS---- 184 (386)
Q Consensus 128 ---------d~~~l~~~~~~--~~~--------~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~---- 184 (386)
|++++++++++ +++ ++++++| |++|.+.|+++|.++|+++|+++++|++|+.....
T Consensus 282 ~g~i~~~~~d~e~le~~i~~~~~~k~~~~~~~klvil~~p-n~~G~v~dl~~I~~ia~~~~~~livDeA~~~~~~~~~~~ 360 (755)
T 2vyc_A 282 IGPIYPQEMQPETLQKKISESPLTKDKAGQKPSYCVVTNC-TYDGVCYNAKEAQDLLEKTSDRLHFDEAWYGYARFNPIY 360 (755)
T ss_dssp BCCCCGGGGSHHHHHHHHHHCTTTGGGTTCCCSCEEEESS-CTTSEEECHHHHHHHHTTTCSEEEEECTTCTTGGGCGGG
T ss_pred ccccCcCCCCHHHHHHHHHhCccccccccCCCeEEEEECC-CCCceecCHHHHHHHHHHcCCEEEEECcCchhcccCccc
Confidence 78999988853 444 8999998 78999999999999999999999999999743211
Q ss_pred ---CCCCCC--ccE------EEeccccccccCCCceEEEEEEcCh--hH-HHHHHHh-hhhcCCCCChhhHHHHHhc---
Q 016612 185 ---RPLELG--ADI------VMHSATKFIAGHSDVMAGVLAVKGE--RL-AKELYFL-QNAEGSGLAPFDCWICLRG--- 246 (386)
Q Consensus 185 ---~~~~~~--~di------~~~S~sK~~~g~~g~~~G~i~~~~~--~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~--- 246 (386)
.+. .+ +|+ ++.|+||+++|+.+ +|+++++++ .+ ...+... ........+....+.+..+
T Consensus 361 ~~~~~~-~g~~aD~~~~~~iv~~S~hK~L~g~~~--g~~i~~~~~~~~i~~~~~~~~~~~~~s~sp~~~~iaal~aA~~~ 437 (755)
T 2vyc_A 361 ADHYAM-RGEPGDHNGPTVFATHSTHKLLNALSQ--ASYIHVREGRGAINFSRFNQAYMMHATTSPLYAICASNDVAVSM 437 (755)
T ss_dssp TTSSSS-CSCCCCCSSBEEEEEEETTTSSSCCTT--CEEEEEECCBTCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHH
T ss_pred CCcchh-cCCcCCccCCCeEEEECccccccCcCC--eeeeeecCcccccCHHHHHHHHHHhCCCCHHHHHHHHHHHHHHH
Confidence 122 34 565 99999999988765 688887654 22 1222221 1222222222222222111
Q ss_pred CCc--HHHHHHHHHHHHHHHHHHHhhC
Q 016612 247 VKT--MALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 247 ~~~--~~~~~~~~~~~~~~l~~~l~~~ 271 (386)
+.. ...+.++..++++.+.+.+++.
T Consensus 438 l~~~gg~~~~~~~~~~a~~~r~~L~~l 464 (755)
T 2vyc_A 438 MDGNSGLSLTQEVIDEAVDFRQAMARL 464 (755)
T ss_dssp HSTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 211 2345566677777777777653
No 222
>2cjg_A L-lysine-epsilon aminotransferase; internal aldimine, pyridoxal phosphate, PLP, RV3290C, lysine amino transferase; HET: PMP; 1.95A {Mycobacterium tuberculosis} PDB: 2cjd_A* 2cin_A* 2cjh_A* 2jjg_A* 2jje_A* 2jjh_A* 2jjf_A
Probab=99.83 E-value=8.8e-20 Score=173.84 Aligned_cols=282 Identities=13% Similarity=0.081 Sum_probs=173.0
Q ss_pred CCchHHHHHHHHHhhcC---CCceEEeCcHHHHHHHHHH-h---cC-----------CCCEEEecCCCCCcHHHHHhhhc
Q 016612 53 GNPTRDALESLLAKLDK---ADRALCFTSGMAALAAVTH-L---LG-----------TGEEIVAGDDLYGGTDRLLSRVT 114 (386)
Q Consensus 53 g~~~~~~l~~~l~~~~g---~~~~i~~~~gt~al~~~~~-~---~~-----------~g~~Vlv~~~~~~~~~~~~~~~~ 114 (386)
..+...++++.++++++ .+++++++||++|+..++. + .. +||+|++.+|.|+++........
T Consensus 99 ~~~~~~~la~~la~~~~~~~~~~v~~~~~gseA~~~aik~a~~~~~~~~~~~~~~~~~~~~Vi~~~~~yhg~~~~~~~~~ 178 (449)
T 2cjg_A 99 YSVAMARFVETFARVLGDPALPHLFFVEGGALAVENALKAAFDWKSRHNQAHGIDPALGTQVLHLRGAFHGRSGYTLSLT 178 (449)
T ss_dssp CCHHHHHHHHHHHHHHCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSCTTCCCEEEEETTCCCCSSTTGGGTC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHHhcccccccccccCCCCEEEEECCCcCCcccchhhhc
Confidence 34578899999999985 3467788889999864332 2 22 28999999999987532111111
Q ss_pred c----------cCCcEEEEeCCCC--H-------------HHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHH
Q 016612 115 P----------KTGVVVKRVNTCD--L-------------DEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIA 162 (386)
Q Consensus 115 ~----------~~g~~~~~v~~~d--~-------------~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~ 162 (386)
. .....+..++..| . +++++.++ +++++|++++++||+|.+.+ +++|.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~le~~i~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~ 258 (449)
T 2cjg_A 179 NTKPTITARFPKFDWPRIDAPYMRPGLDEPAMAALEAEALRQARAAFETRPHDIACFVAEPIQGEGGDRHFRPEFFAAMR 258 (449)
T ss_dssp CSCHHHHTTSCCCCCCEECCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHSTTTEEEEEECSEETTTTCEECCHHHHHHHH
T ss_pred CCchhhcccCCCCCCCcEEEcCCCchhhccccchhhHHHHHHHHHHHHhcCCceEEEEEeCcCCCCCCccCCHHHHHHHH
Confidence 1 1112566666555 3 33787773 68899998888899997766 99999
Q ss_pred HHHHHcCCEEEEeCCCC-CCCccC-----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHH-----Hhhhhc
Q 016612 163 EMAHAHGALLLVDNSIM-SPVLSR-----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELY-----FLQNAE 231 (386)
Q Consensus 163 ~la~~~~~~li~D~a~~-~~~~~~-----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~-----~~~~~~ 231 (386)
++|++||+++|+||+|+ .+.... ......|++ |+||++ + +|++++++ ++.+.+. ......
T Consensus 259 ~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~~~~~di~--t~sK~l--~----iG~~~~~~-~~~~~l~~~~~~~~~~~~ 329 (449)
T 2cjg_A 259 ELCDEFDALLIFDEVQTGCGLTGTAWAYQQLDVAPDIV--AFGKKT--Q----VCGVMAGR-RVDEVADNVFAVPSRLNS 329 (449)
T ss_dssp HHHHHTTCEEEEECTTTTTTTTSSSSTHHHHTCCCSEE--EECGGG--S----SEEEEECG-GGGGSTTCTTTSTTSSCC
T ss_pred HHHHHCCcEEEEeccccCCCccCcceeecccCCCceEE--EecCcc--c----EEEEEECH-HHhhhhhhcccCCccccc
Confidence 99999999999999997 222211 112345766 578988 2 68888875 4544211 111112
Q ss_pred CCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCCH
Q 016612 232 GSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGSL 309 (386)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~ 309 (386)
..+.++..+.++..+++.+.. ..++..++.+.+.+.|++... ..+. . . ...++.+.++.+.+.+.
T Consensus 330 t~~~n~~~~~aa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~~----~~~~---~--~----~~~~~~g~~~~~~~~~~ 396 (449)
T 2cjg_A 330 TWGGNLTDMVRARRILEVIEAEGLFERAVQHGKYLRARLDELAA----DFPA---V--V----LDPRGRGLMCAFSLPTT 396 (449)
T ss_dssp SSSSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHH----HSTT---T--S----EEEEEETTEEEEECSSH
T ss_pred CCCCCHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHh----hCCC---c--e----eeEeeccEEEEEEECCh
Confidence 234456666655555543221 223344444555555543200 0011 0 0 01134578888888765
Q ss_pred HhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhc
Q 016612 310 ALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRT 383 (386)
Q Consensus 310 ~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~ 383 (386)
.....+.+.+...|+.+.+++ ++++|++++ .++++++++.|++++++
T Consensus 397 ~~~~~~~~~l~~~Gv~v~~~g---------------------------~~~iRi~~~~~~t~e~i~~~l~~l~~~l~~ 447 (449)
T 2cjg_A 397 ADRDELIRQLWQRAVIVLPAG---------------------------ADTVRFRPPLTVSTAEIDAAIAAVRSALPV 447 (449)
T ss_dssp HHHHHHHHHHHHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHCCeEEecCC---------------------------CCEEEEECCCCCCHHHHHHHHHHHHHHHHH
Confidence 446677777767787665432 355999764 47788888888888765
No 223
>3qm2_A Phosphoserine aminotransferase; structural genomics, center for structural genomics of infec diseases, csgid; 2.25A {Salmonella enterica subsp} PDB: 1bjn_A* 1bjo_A* 3qbo_A*
Probab=99.82 E-value=1e-19 Score=168.66 Aligned_cols=152 Identities=12% Similarity=0.029 Sum_probs=117.1
Q ss_pred chHHHHHHHHHhhcCCC--ceEEe--CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--
Q 016612 55 PTRDALESLLAKLDKAD--RALCF--TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-- 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~--~~i~~--~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-- 127 (386)
...+++++.+++++|.+ +.|++ ++||++++ ++..++++||+|++...++.+. .|...++..| ++..++.+
T Consensus 72 ~~~~~ar~~la~ll~~~~~~evif~t~~~T~a~n~ai~~l~~~gd~v~~~~~~~~~~--~~~~~a~~~G-~v~~v~~~~~ 148 (386)
T 3qm2_A 72 QVAEEAEQDFRDLLNIPSNYKVLFCHGGGRGQFAGVPLNLLGDKTTADYVDAGYWAA--SAIKEAKKYC-APQIIDAKIT 148 (386)
T ss_dssp -CCHHHHHHHHHHHTCCTTEEEEEEESCTTHHHHHHHHHHCTTCCEEEEEESSHHHH--HHHHHHTTTS-EEEEEECEEE
T ss_pred HHHHHHHHHHHHHhCCCCCceEEEEcCCchHHHHHHHHhccCCCCeEEEEeCCHHHH--HHHHHHHHhC-CeEEEecCcc
Confidence 36788999999999985 34444 57789997 5566889999987655555443 3446677888 77776643
Q ss_pred ------CHHHHHhhhCCCceEEEEeCCCCCCccc-ccHHHHHHHHHHcCCEEEEeCCCCCCCcc-CCCCCCccEEEeccc
Q 016612 128 ------DLDEVASAIGPWTKLVWVESPTNPRQQI-CDIRKIAEMAHAHGALLLVDNSIMSPVLS-RPLELGADIVMHSAT 199 (386)
Q Consensus 128 ------d~~~l~~~~~~~~~~v~~~~~~nptG~~-~~l~~i~~la~~~~~~li~D~a~~~~~~~-~~~~~~~di~~~S~s 199 (386)
++++++..++++|++|.+++.+|.||.+ .|+++|. +|+++++|.+++.|..+ +..++ +++++|.+
T Consensus 149 ~~G~~~~~~~~~~~l~~~t~lV~~~h~et~tG~~i~pi~~i~-----~g~~~~vDa~qs~g~~pidv~~~--~~~~~s~h 221 (386)
T 3qm2_A 149 VDGKRAVKPMREWQLSDNAAYLHYCPNETIDGIAIDETPDFG-----PEVVVTADFSSTILSAPLDVSRY--GVIYAGAQ 221 (386)
T ss_dssp ETTEEEECCGGGCCCCTTCSCEEECSEETTTTEECCCCCCCC-----TTCCEEEECTTTTTSSCCCGGGC--SEEEEETT
T ss_pred cCCCCCCchHHHhhcCCCCcEEEEECCcCCcCEecCchhhhc-----CCCEEEEEcccccCCCCCCcccc--CEEEEecc
Confidence 4567778888999999999999999996 8888885 79999999999998865 33333 46779999
Q ss_pred cccccCCCceEEEEEEcChh
Q 016612 200 KFIAGHSDVMAGVLAVKGER 219 (386)
Q Consensus 200 K~~~g~~g~~~G~i~~~~~~ 219 (386)
|++ ||+| .|+++++++.
T Consensus 222 K~l-GP~G--~g~l~v~~~~ 238 (386)
T 3qm2_A 222 KNI-GPAG--LTLVIVREDL 238 (386)
T ss_dssp TTT-CCTT--EEEEEEEGGG
T ss_pred ccc-CCCc--cEEEEECHHH
Confidence 999 6898 7999988653
No 224
>2e7u_A Glutamate-1-semialdehyde 2,1-aminomutase; PLP enzyme, GSA, structural genomics, NPPSFA; HET: PMP; 1.90A {Thermus thermophilus}
Probab=99.81 E-value=8.7e-19 Score=165.84 Aligned_cols=257 Identities=18% Similarity=0.143 Sum_probs=160.2
Q ss_pred CchHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHHHHHhhhc----------ccCCc
Q 016612 54 NPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTDRLLSRVT----------PKTGV 119 (386)
Q Consensus 54 ~~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~~~~~~~~----------~~~g~ 119 (386)
.+.+.++++.+++++ +.++.++++||++|+.+++. .+.+++.|++.+|.|+++........ ...|+
T Consensus 91 ~~~~~~l~~~l~~~~~~~~~v~~~~~g~ea~~~al~~ar~~~~~~~vi~~~~~yhg~~~~~~~~~~~~~~~~~~p~~~g~ 170 (424)
T 2e7u_A 91 SPLEVALAKKVKRAYPFVDLVRFVNSGTEATMSALRLARGYTGRPYIVKFRGNYHGHADGLLVEAGSGALTLGVPSSAGV 170 (424)
T ss_dssp CHHHHHHHHHHHHHCTTCCEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCCCGGGSEECCSSSCCBCEESSTTC
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCCHHHHHHHHHHHHHHhhCCCEEEEECCCcCCCcHHHHHhcCCcccccCCCCCCCC
Confidence 357899999999998 56678888899999874433 24456889999999987531110100 11232
Q ss_pred ------EEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCCccC-
Q 016612 120 ------VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLSR- 185 (386)
Q Consensus 120 ------~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~~~~- 185 (386)
.+..++..|++++++.++ +++++|++++.++++|.+.+ +++|.++ ++||++||+||+|+.-....
T Consensus 171 ~~~~~~~~~~~~~~d~~~le~~l~~~~~~~~~vi~ep~~~~~G~~~~~~~~l~~l~~l-~~~g~~lI~DEv~~g~~~g~~ 249 (424)
T 2e7u_A 171 PEEYAKLTLVLEYNDPEGLREVLKRRGEEIAAIIFEPVVGNAGVLVPTEDFLKALHEA-KAYGVLLIADEVMTGFRLAFG 249 (424)
T ss_dssp CHHHHTTEEEECTTCHHHHHHHHHHHGGGEEEEEECSSBCTTSCBCCCHHHHHHHHHG-GGGTCEEEEECTTTTTTSSTT
T ss_pred CCccCCceEeCCCCCHHHHHHHHHhCCCCEEEEEEeCCCCCCCCcCCCHHHHHHHHHH-HHcCCEEEEecCccccccchh
Confidence 356667779999998886 46777777666666898887 9999999 99999999999997221111
Q ss_pred ----CCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhh---hhcCCCCChhhHHHHHhcCCcHHH---HHH
Q 016612 186 ----PLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQ---NAEGSGLAPFDCWICLRGVKTMAL---RVE 255 (386)
Q Consensus 186 ----~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 255 (386)
......|++ |+||++++ |+++|++++++ ++.+.+.... .......++..++++...++.+.. ..+
T Consensus 250 ~~~~~~~~~~di~--s~sK~l~~--G~~~G~~~~~~-~~~~~~~~~~~~~~~~t~~~~~~~~aaa~aal~~~~~~~~~~~ 324 (424)
T 2e7u_A 250 GATELLGLKPDLV--TLGKILGG--GLPAAAYAGRR-EIMEKVAPLGPVYQAGTLSGNPLAMAAGLATLELLEENPGYYA 324 (424)
T ss_dssp HHHHHHTCCCSEE--EECGGGGT--TSSCEEEEECH-HHHTTBTTTSSBCCCCTTCSCHHHHHHHHHHHHHHHHCTHHHH
T ss_pred HHHHHhCCCcchh--hhhhhhhC--CcceEEEEEcH-HHHhhhcccCCcccCCCCCCCHHHHHHHHHHHHHHHhccHHHH
Confidence 112245765 78999963 68899999874 4554333211 111224556666555555543322 333
Q ss_pred HHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-------------HHhHHHHHhhcCcc
Q 016612 256 KQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-------------LALSKHVVETTKYF 322 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-------------~~~~~~l~~~l~~~ 322 (386)
+..++.+.+.+.+++... .. ++. ...++.|.++++.+.. .....++.+.+...
T Consensus 325 ~~~~~~~~l~~~L~~~~~----~~-~~~---------~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 390 (424)
T 2e7u_A 325 YLEDLGARLEAGLKEVLK----EK-GLP---------HTVNRVGSMITVFFTEGPVVTFQDARRTDTELFKRFFHGLLDR 390 (424)
T ss_dssp HHHHHHHHHHHHHHHHHH----HT-TCC---------CEEEEETTEEEEESSSSCCCSHHHHTTSCHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHH----hC-CCc---------eEEEeeceEEEEEEeCCCCcchhhhcccCHHHHHHHHHHHHHC
Confidence 444455555555543210 00 010 0012356788888753 23456777877778
Q ss_pred eeccCCCC
Q 016612 323 SITVSFGS 330 (386)
Q Consensus 323 gi~~~~G~ 330 (386)
|+.+.+|.
T Consensus 391 Gv~v~~~~ 398 (424)
T 2e7u_A 391 GIYWPPSN 398 (424)
T ss_dssp TEECCSSS
T ss_pred CeEEeccC
Confidence 98877654
No 225
>2yky_A Beta-transaminase; transferase; HET: PLP SFE; 1.69A {Mesorhizobium SP} PDB: 2ykv_A* 2yku_A* 2ykx_A*
Probab=99.69 E-value=1.5e-21 Score=184.96 Aligned_cols=322 Identities=13% Similarity=0.085 Sum_probs=194.4
Q ss_pred eeeccCCCCC--CCCCcccceeeeeeeecCCCCCCCCccccCCCCchHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHHH
Q 016612 12 LLMNFSNEFD--PYGALSTPLYQTATFKQPSATENGPYDYTRSGNPTRDALESLLAKLD-KADRALCFTSGMAALAAVTH 88 (386)
Q Consensus 12 ~~~~~~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~~ 88 (386)
+.+++..+.. .+|..+|.+.++.... +.....+. ...+...++++.+++++ +.+..++++||++|+..++.
T Consensus 101 ~yiD~~~~~~~~~lGh~~p~V~~Av~~q---~~~~~~~~---~~~~~~~~Lae~L~~~~p~~~~v~~~nSGseA~~~Aik 174 (465)
T 2yky_A 101 AYVNFLGEYTAGLFGHSHPVIRAAVERA---LAVGLNLS---TQTENEALFAEAVCDRFPSIDLVRFTNSGTEANLMALA 174 (465)
Confidence 3455552222 3677677766643222 11111111 13457788999999988 66778889999999875444
Q ss_pred h---cCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHHHHhhhC---CCceEEEEeCCCCCCccccc---
Q 016612 89 L---LGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG---PWTKLVWVESPTNPRQQICD--- 157 (386)
Q Consensus 89 ~---~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~~~---~~~~~v~~~~~~nptG~~~~--- 157 (386)
+ ...+++|++.++.|++.......-....|+ .+..++..|++++++.++ +++++|+++.+++++|.+.+
T Consensus 175 ~ar~~tgr~~ii~~~~~yHG~~~~~~sg~~~~g~~~~~~~~~~~d~~~l~~~l~~~~~~~aavi~epv~~~~G~~~~~~~ 254 (465)
T 2yky_A 175 TATAITGRKTVLAFDGGYHGGLLNFASGHAPTNAPYHVVLGVYNDVEGTADLLKRHGHDCAAILVEPMLGAGGCVPAERA 254 (465)
Confidence 3 345689999999997753221100012333 445556678999999887 68999999887777998776
Q ss_pred -HHHHHHHHHHcCCEEEEeCCCCCCCccCC---C--CCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHH-----
Q 016612 158 -IRKIAEMAHAHGALLLVDNSIMSPVLSRP---L--ELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYF----- 226 (386)
Q Consensus 158 -l~~i~~la~~~~~~li~D~a~~~~~~~~~---~--~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~----- 226 (386)
+++|.++|+++|+++|+||+|+ ...... . ....|++ |++|++++ |+++|++++++ ++.+.+..
T Consensus 255 ~l~~l~~l~~~~g~llI~DEv~~-~r~g~~~a~~~~gv~pDi~--t~sK~lg~--G~piG~v~~~~-~i~~~l~~~~~g~ 328 (465)
T 2yky_A 255 FLDLLRAEASRCGALLIFDEVMT-SRLSGGGAQEMLGISADLT--TLGKYIGG--GMSFGAFGGRR-DLMERFDPARDGA 328 (465)
Confidence 9999999999999999999998 422111 1 1234554 78999965 68999999874 45554443
Q ss_pred hhhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEe
Q 016612 227 LQNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLT 306 (386)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~ 306 (386)
.......+.++..++++...++.+.. +...++.+.+.+++.+.-. .. +...+ +. ...++.|.++++.+
T Consensus 329 ~~~~~T~~~npla~aAa~aaL~~l~~--~~~~~~~~~~~~~l~~~L~--~~----~~~~~---~~-~~v~g~G~~~~i~~ 396 (465)
T 2yky_A 329 FAHAGTFNNNILTMSAGHAALTQIYT--RQAASDLSASGDRFRANLN--RI----AVENQ---AP-LQFTGLGSLGTIHF 396 (465)
Confidence 11222234455555555555554322 2233444444444433210 00 11111 10 11245678888876
Q ss_pred CC-------------HHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccCChHHH
Q 016612 307 GS-------------LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIEDVNDL 373 (386)
Q Consensus 307 ~~-------------~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~~~~~~ 373 (386)
.+ .....++.+.+...|+.+.++.... +-+..+.+++++.
T Consensus 397 ~~~~~~~~~~~~~~d~~~~~~~~~~ll~~GV~v~p~~~~~---------------------------~s~~~t~edid~~ 449 (465)
T 2yky_A 397 SRAPIRSAGDVRAADQQLKELFFFHMLRKGIYLAPRGMYA---------------------------LSLEIADAGRDAF 449 (465)
Confidence 43 1225577788888888766544210 1123456889999
Q ss_pred HHHHHHHHhcC
Q 016612 374 ISDLDKALRTG 384 (386)
Q Consensus 374 i~~l~~~l~~~ 384 (386)
++.+.++++++
T Consensus 450 l~~l~~~l~~~ 460 (465)
T 2yky_A 450 AEALADFIGEQ 460 (465)
Confidence 99998888754
No 226
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=99.79 E-value=2.1e-18 Score=165.20 Aligned_cols=293 Identities=16% Similarity=0.103 Sum_probs=165.8
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHH-HHHHhcCC-----C----CEEEecCCCCCcHHHHHhhhcccCCcEEEEe
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALA-AVTHLLGT-----G----EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV 124 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~-~~~~~~~~-----g----~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v 124 (386)
+...++++.+++++|.++.++++||++|+. ++..++++ | |+|++. +.|..+... .....|..+...
T Consensus 74 ~~~~~l~~~la~~~~~~~v~~t~~gt~A~~~al~~~~~~~~~~~G~~~~d~Ii~~-~~h~~t~~~---~~~~~~~~~~~~ 149 (467)
T 2oqx_A 74 RSYYALAESVKNIFGYQYTIPTHQGRGAEQIYIPVLIKKREQEKGLDRSKMVAFS-NYFFDTTQG---HSQINGCTVRNV 149 (467)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEC--CCSHHHHHHHHHHHHHHHHCCCTTTCEEEE-SSCCHHHHH---HHHHTTCEEEEC
T ss_pred chhHHHHHHHHHHhCcCcEEEcCCcHHHHHHHHHHHhccccccCCCCccceEEec-ccccccchh---hhhccCcceeec
Confidence 457789999999999888889999998876 55556677 8 988877 444332211 111223333221
Q ss_pred ------C------C---CCHHHHHhhhC----CCceEEEEeCCCCCC-ccccc---HHHHHHHHHHcCCEEEEeCCCCC-
Q 016612 125 ------N------T---CDLDEVASAIG----PWTKLVWVESPTNPR-QQICD---IRKIAEMAHAHGALLLVDNSIMS- 180 (386)
Q Consensus 125 ------~------~---~d~~~l~~~~~----~~~~~v~~~~~~npt-G~~~~---l~~i~~la~~~~~~li~D~a~~~- 180 (386)
+ . .|+++|+++++ +++++|++++|+||+ |.+.+ +++|.++|++||++||+|++++.
T Consensus 150 ~~~~~~~~~~~~~~~~~~d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~D~a~~~e 229 (467)
T 2oqx_A 150 YIKEAFDTGVRYDFKGNFDLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVMDSARFAE 229 (467)
T ss_dssp BCTTTTCTTSCCTTTTCBCHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEEECTTHHH
T ss_pred cccccccCCCCCCccCCcCHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEEEchhhhh
Confidence 1 1 28899999987 379999999999998 76654 88999999999999999977644
Q ss_pred ----------CCcc-CCCC------CCccEEEeccccccccCCCceEEEEEEcCh---hHHHHHHHhh-hhcC----CCC
Q 016612 181 ----------PVLS-RPLE------LGADIVMHSATKFIAGHSDVMAGVLAVKGE---RLAKELYFLQ-NAEG----SGL 235 (386)
Q Consensus 181 ----------~~~~-~~~~------~~~di~~~S~sK~~~g~~g~~~G~i~~~~~---~~~~~~~~~~-~~~~----~~~ 235 (386)
+... .... ...|++++|+||+++.+. +|+++++++ +....+.... ...+ ...
T Consensus 230 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~s~sK~~g~~~---Gg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (467)
T 2oqx_A 230 NAYFIKQREAEYKDWTIEQITRETYKYADMLAMSAKKDAMVPM---GGLLCMKDDSFFDVYTECRTLCVVQEGFPTYGGL 306 (467)
T ss_dssp HHHHHHHHCGGGTTSCHHHHHHHHGGGCSEEEEESSSTTCCSS---CEEEEECSGGGHHHHHHHHHHHHHTTSSCCCCCC
T ss_pred hhhhcccccccccCccHHHHhhhhhccCCeEEEecccccCCCC---ceEEEecChhHHHHHHHHHHhhhccCCcccccch
Confidence 1111 1111 246788999999996542 588887755 2333333222 1111 111
Q ss_pred ChhhHHHHHhcCCc-H-HHHHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC----C-
Q 016612 236 APFDCWICLRGVKT-M-ALRVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG----S- 308 (386)
Q Consensus 236 ~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~----~- 308 (386)
......++..++.. + ...+++..++.+.+.+.|++. .+ .+. + . .+.++++.+. +
T Consensus 307 ~~~~~~al~~~l~~~~~~~~~~~~~~~~~~l~~~L~~~-~~--------------~~~--~-~-~~~~~~~~~~~~~~~~ 367 (467)
T 2oqx_A 307 EGGAMERLAVGLYDGMNLDWLAYRIAQVQYLVDGLEEI-GV--------------VCQ--Q-A-GGHAAFVDAGKLLPHI 367 (467)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHT-TC--------------CEE--E-E-CSSCEEEEHHHHSTTS
T ss_pred hhhHHHHHHHhhHhhhhHHHHHHHHHHHHHHHHHHHHC-CC--------------eee--c-C-CceEEEEechhhcccC
Confidence 22111111111111 0 123344456666777777654 11 111 0 1 2345666652 1
Q ss_pred --HHh-HHHHHhhc-CcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEeccC-----ChHHHHHHHHH
Q 016612 309 --LAL-SKHVVETT-KYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGIE-----DVNDLISDLDK 379 (386)
Q Consensus 309 --~~~-~~~l~~~l-~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~~-----~~~~~i~~l~~ 379 (386)
... ...+.+.+ ...|+.+.+++.+..-..|.. ..+ .....+++|++++.. +++++++.|++
T Consensus 368 ~~~~~~~~~l~~~L~~~~gv~~~~~~~~~~~~~~~~----g~~------~~~~~~~iRl~~~~~~~t~e~i~~~~~~l~~ 437 (467)
T 2oqx_A 368 PADQFPAQALACELYKVAGIRAVEIGSFLLGRDPKT----GKQ------LPCPAELLRLTIPRATYTQTHMDFIIEAFKH 437 (467)
T ss_dssp CGGGCHHHHHHHHHHHHHCEECEEESHHHHCBCTTT----CSB------CCCSCCEEEECCCTTTSCHHHHHHHHHHHHH
T ss_pred CcccccHHHHHHHHHHhcCceecccccccccccccc----ccc------ccCccCeEEEEecCCCCCHHHHHHHHHHHHH
Confidence 122 44556666 667887766332100000000 000 001247899999854 77777777777
Q ss_pred HHhc
Q 016612 380 ALRT 383 (386)
Q Consensus 380 ~l~~ 383 (386)
++++
T Consensus 438 ~l~~ 441 (467)
T 2oqx_A 438 VKEN 441 (467)
T ss_dssp HHHS
T ss_pred HHhh
Confidence 7754
No 227
>3m5u_A Phosphoserine aminotransferase; alpha-beta half sandwich, csgid, amino-acid biosynthesis, cytoplasm, pyridoxal phosphate; HET: MES; 2.15A {Campylobacter jejuni} SCOP: c.67.1.0
Probab=99.79 E-value=1.6e-18 Score=159.29 Aligned_cols=272 Identities=13% Similarity=0.022 Sum_probs=164.5
Q ss_pred hHHHHHHHHHhhcCCC--ceEEe--CcHHHHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC---
Q 016612 56 TRDALESLLAKLDKAD--RALCF--TSGMAALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--- 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~--~~i~~--~~gt~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--- 127 (386)
..+++++.+++++|.+ ..+++ ++||++++ ++..++ +||++++...++.+. .|...++..|++++.++.+
T Consensus 51 ~~~~~r~~la~ll~~~~~~~v~f~t~~~T~a~n~~~~~~~-~~~~~~~i~~~~~~~--~~~~~a~~~G~~v~~~~~~~~g 127 (361)
T 3m5u_A 51 VHFGAQEKAKKLYELNDDYEVLFLQGGASLQFAMIPMNLA-LNGVCEYANTGVWTK--KAIKEAQILGVNVKTVASSEES 127 (361)
T ss_dssp HHHHHHHHHHHHHTCCTTEEEEEESSHHHHHHHHHHHHHC-CSSCEEEEECSHHHH--HHHHHHHHTTCCEEEEEECTTT
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEcCcHHHHHHHHHHhcC-CCCeEEEEeCCHHHH--HHHHHHHHcCCceEEEecccCc
Confidence 5788899999999984 34544 45579997 455677 888653222223232 2345566778887777642
Q ss_pred ----CHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCccCCCCCCccEEEeccccccc
Q 016612 128 ----DLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLSRPLELGADIVMHSATKFIA 203 (386)
Q Consensus 128 ----d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~~~~~~~~di~~~S~sK~~~ 203 (386)
++++ + ++++|++|.+++.+|.+|.+.|. +++ +|+++++|.+++.|..+-..+ +.|++++|.+|++
T Consensus 128 ~~~~~~~~--~-l~~~t~lv~~~~~e~~tG~~~~~-----i~~-~~~~~~vD~~q~~g~~~id~~-~~d~~~~s~~K~~- 196 (361)
T 3m5u_A 128 NFDHIPRV--E-FSDNADYAYICSNNTIYGTQYQN-----YPK-TKTPLIVDASSDFFSRKVDFS-NIALFYGGVQKNA- 196 (361)
T ss_dssp TSCSCCCC--C-CCTTSSEEEEESEETTTTEECSS-----CCC-CSSCEEEECGGGTTSSCCCCT-TEEEEEEETTTTS-
T ss_pred CCCcCChh--h-cCCCCCEEEEeCCCCCcceeCCc-----ccc-cCCEEEEEcccccCCCCCCcc-cCCEEEEechhcc-
Confidence 3444 4 78899999999999999999762 333 499999999999988753333 4799999999999
Q ss_pred cCCCceEEEEEEcChhHHHHHHH-----------h-hhhcCCCC-ChhhHHHHHhcCC------cHHHHHHHHHHHHHHH
Q 016612 204 GHSDVMAGVLAVKGERLAKELYF-----------L-QNAEGSGL-APFDCWICLRGVK------TMALRVEKQQDNAQKI 264 (386)
Q Consensus 204 g~~g~~~G~i~~~~~~~~~~~~~-----------~-~~~~~~~~-~~~~~~~~~~~~~------~~~~~~~~~~~~~~~l 264 (386)
||+| .|+++++++.+ +.+.. . ......+. +....+.+..+++ .+....++..+..+.+
T Consensus 197 gp~G--~g~l~~~~~~~-~~~~~~~~p~~~~~~~~~~~~~~~~Tp~v~~i~~l~~al~~l~~~gG~~~i~~~~~~l~~~l 273 (361)
T 3m5u_A 197 GISG--LSCIFIRKDML-ERSKNKQIPSMLNYLTHAENQSLFNTPPTFAIYMFNLEMDWLLNQGGLDKVHEKNSQKATML 273 (361)
T ss_dssp SCTT--CEEEEEEHHHH-HHHHTCCCCGGGCHHHHHHTTTCSSCCCHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHH
T ss_pred CCCc--cEEEEEcHHHH-hhhcCCCCCceeehHHHhhcCCCCCCccHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHH
Confidence 6888 69999885533 33321 0 01111122 2222222222222 2344444555555666
Q ss_pred HHHHhhCCCcceEecCCCCCCCchhhhhhccCCCCceEEEEeCC-HHhHHHHHhhcCcceeccCCCCccccccccccccC
Q 016612 265 AEFLASHPRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTGS-LALSKHVVETTKYFSITVSFGSVKSLISMPCFMSH 343 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~-~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~ 343 (386)
.+.+++.+.+.. ++.........+++|.+++ ......+...+...|+.++.|..
T Consensus 274 ~~~L~~~~g~~~-------------~~~~~~~rs~~ivsf~~~~~~~~~~~~~~~L~~~gI~~~~g~~------------ 328 (361)
T 3m5u_A 274 YECIDLSNGFYK-------------GHADKKDRSLMNVSFNIAKNKDLEPLFVKEAEEAGMIGLKGHR------------ 328 (361)
T ss_dssp HHHHHTSTTSEE-------------ESSCGGGBCSSEEEEEESSCTTHHHHHHHHHHHTTEECCBCCT------------
T ss_pred HHHHHHCCCeee-------------ccCCHHHcCCeEEEEECCCchhhhHHHHHHHHHCCCEEecCCC------------
Confidence 666665432100 1000101124588999875 22224677777777888766543
Q ss_pred CCCCHHHHHhcCCCCCeEEEEecc----CChHHHHHHHHHHHh
Q 016612 344 ASIPVEVRQARGLTEDLVRISVGI----EDVNDLISDLDKALR 382 (386)
Q Consensus 344 ~~~~~~~~~~~~~~~~~iRis~~~----~~~~~~i~~l~~~l~ 382 (386)
..+.+|+|++. ++++.+++.|++..+
T Consensus 329 -------------~~g~iRiS~~~~~t~edId~l~~al~~~~~ 358 (361)
T 3m5u_A 329 -------------ILGGIRASIYNALNLDQVKTLCEFMKEFQG 358 (361)
T ss_dssp -------------TTCSEEEECCTTSCHHHHHHHHHHHHHHHH
T ss_pred -------------ccCeEEEEccCCCCHHHHHHHHHHHHHHHH
Confidence 11349999975 455555555555443
No 228
>3n75_A LDC, lysine decarboxylase, inducible; pyridoxal-5'-phosphate dependent decarboxylase, acid stress stringent response; HET: LLP G4P P6G; 2.00A {Escherichia coli} PDB: 3q16_A*
Probab=99.77 E-value=1e-17 Score=165.24 Aligned_cols=207 Identities=14% Similarity=0.080 Sum_probs=147.6
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcHH-HHHH-HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 56 TRDALESLLAKLDKADRALCFTSGM-AALA-AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~gt-~al~-~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
...++++.+++++|.++.+++++|+ .|+. ++.++++|||+|++++++|.++.. .+...|.++++++..
T Consensus 196 ~i~eaE~~lA~~fGa~~a~~v~nGts~An~~ai~al~~pGD~VLv~r~~H~S~~~----~l~lsGa~pv~v~~~~~~~gi 271 (715)
T 3n75_A 196 PHKEAEQYIARVFNADRSYMVTNGTSTANKIVGMYSAPAGSTILIDRNCHKSLTH----LMMMSDVTPIYFRPTRNAYGI 271 (715)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHCCTTCEEEEESSCCHHHHH----HHHHSCCEEEEECCCBCTTCC
T ss_pred HHHHHHHHHHHHhCCCCceEECcHHHHHHHHHHHHhCCCCCEEEECCCccHHHHH----HHHHcCCEEEEEecccccccc
Confidence 6899999999999999999999996 7765 667789999999999999998864 345678888888742
Q ss_pred ---------CHHHHHhhhC--CCce---EEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCC-----cc--CC
Q 016612 128 ---------DLDEVASAIG--PWTK---LVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPV-----LS--RP 186 (386)
Q Consensus 128 ---------d~~~l~~~~~--~~~~---~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~-----~~--~~ 186 (386)
|+++++++++ ++++ ++++++| |++|.+.|+++|.++|++++ +++|++|+.+. .. ..
T Consensus 272 ~~~i~~~~~d~e~Le~~l~~~~~~k~p~~vivt~p-n~~G~v~dl~~I~ela~~~~--livDEAH~~~~~f~~~~~~~~a 348 (715)
T 3n75_A 272 LGGIPQSEFQHATIAKRVKETPNATWPVHAVITNS-TYDGLLYNTDFIKKTLDVKS--IHFDSAWVPYTNFSPIYEGKCG 348 (715)
T ss_dssp BCCCCGGGGSHHHHHHHHHHSTTCCSCSEEEEESS-CTTSEEECHHHHHHHCCCSE--EEEECTTCTTGGGSGGGTTSST
T ss_pred ccCcccccCCHHHHHHHHhhCcCccCceEEEEECC-CCCCccCCHHHHHHHhCcCc--EEEccccccccccCCccccccc
Confidence 7899999886 3344 8999999 99999999999999998763 79999998553 11 12
Q ss_pred CCCC--ccEE---EeccccccccCCCceEEEEEEcChhHHHHHHHhhh-hcCCCCChhhHHHHHhcC---C--cHHHHHH
Q 016612 187 LELG--ADIV---MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQN-AEGSGLAPFDCWICLRGV---K--TMALRVE 255 (386)
Q Consensus 187 ~~~~--~di~---~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~---~--~~~~~~~ 255 (386)
...+ +|++ +.|+||+++|+.+ +|++.++++.....+..... ...+..+....+.+..+. . .-..+.+
T Consensus 349 l~~g~~aD~vii~~~S~hKtL~gltq--gs~i~v~~~i~~~~~~~~~~~~~STSpsy~~~AsldaA~~~~~~~~g~~~~~ 426 (715)
T 3n75_A 349 MSGGRVEGKVIYETQSTHKLLAAFSQ--ASMIHVKGDVNEETFNEAYMMHTTTSPHYGIVASTETAAAMMKGNAGKRLIN 426 (715)
T ss_dssp TSSSCCTTCEEEEEECHHHHSSCCTT--CEEEEEESCCCHHHHHHHHHHTSCSSCCHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred cccCcCCCEEEEEEecccccccCCCC--eeEEEeCchhhHHHHHHHHHhhcCCCchHHHHHHHHHHHHHHHhhccHHHHH
Confidence 2222 5655 9999999987754 78888876522223322222 223344444333333222 2 1234456
Q ss_pred HHHHHHHHHHHHHhhC
Q 016612 256 KQQDNAQKIAEFLASH 271 (386)
Q Consensus 256 ~~~~~~~~l~~~l~~~ 271 (386)
+..++++.+++.+++.
T Consensus 427 ~l~~~a~~~r~~L~~i 442 (715)
T 3n75_A 427 GSIERAIKFRKEIKRL 442 (715)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHh
Confidence 6677777777777654
No 229
>1ohv_A 4-aminobutyrate aminotransferase; PLP-dependent enzyme, 4- AMIN acid, antiepileptic drug target; HET: PLP; 2.3A {Sus scrofa} SCOP: c.67.1.4 PDB: 1ohw_A* 1ohy_A*
Probab=99.75 E-value=2e-17 Score=158.35 Aligned_cols=279 Identities=14% Similarity=0.144 Sum_probs=164.1
Q ss_pred chHHHHHHHHHhhc--CCCceEEeCcHHHHHHHHHH-hc-------C------------------CC---CEEEecCCCC
Q 016612 55 PTRDALESLLAKLD--KADRALCFTSGMAALAAVTH-LL-------G------------------TG---EEIVAGDDLY 103 (386)
Q Consensus 55 ~~~~~l~~~l~~~~--g~~~~i~~~~gt~al~~~~~-~~-------~------------------~g---~~Vlv~~~~~ 103 (386)
++.+++++.+++++ +.+++++++||++|+.+++. +. + || ++|++.++.|
T Consensus 110 ~l~~~la~~l~~~~~~~~~~v~f~~sGseA~~~Aik~a~~~~~~~~~~~~~~t~~~~~~~~~~~~~g~~r~~ii~~~~~y 189 (472)
T 1ohv_A 110 NFVEKLRESLLSVAPKGMSQLITMACGSCSNENAFKTIFMWYRSKERGQSAFSKEELETCMINQAPGCPDYSILSFMGAF 189 (472)
T ss_dssp THHHHHHHTGGGGCCTTCCEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHTTCTTTSCCCEEEEETTCC
T ss_pred HHHHHHHHHHHHhCCCCcCEEEEeCCchhHHHHHHHHHHHHhhhhccCcccccccccccccccccccCCCCeEEEECCCc
Confidence 46777777777776 45678899999999864333 21 1 45 8999999998
Q ss_pred CcHHHHHhhhcc-----cCCc-----EEEEeCC-----------------CCHHHHHhhhCC------CceEEEEeCCCC
Q 016612 104 GGTDRLLSRVTP-----KTGV-----VVKRVNT-----------------CDLDEVASAIGP------WTKLVWVESPTN 150 (386)
Q Consensus 104 ~~~~~~~~~~~~-----~~g~-----~~~~v~~-----------------~d~~~l~~~~~~------~~~~v~~~~~~n 150 (386)
+++......+.. ..+. ....++. .|+++|++.+++ ++++|++++.+|
T Consensus 190 Hg~~~~~~~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~d~~~l~~~l~~~~~~~~~~~~vive~v~~ 269 (472)
T 1ohv_A 190 HGRTMGCLATTHSKAIHKIDIPSFDWPIAPFPRLKYPLEEFVKENQQEEARCLEEVEDLIVKYRKKKKTVAGIIVEPIQS 269 (472)
T ss_dssp CCSSHHHHHHCCSCHHHHTTSCCCCCCEECCCCCCSSGGGCHHHHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEECSSBC
T ss_pred ccccHHHHhcCCCccccccCCCCCCCcccCCCcccCccccccccchhHHHHHHHHHHHHHHhcCCCCCCEEEEEEcCCcC
Confidence 875432222211 1111 1112221 157788888865 899999999999
Q ss_pred CCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCcc---CCCCCC----ccEEEeccccccccCCCceEEEEEEcCh
Q 016612 151 PRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLS---RPLELG----ADIVMHSATKFIAGHSDVMAGVLAVKGE 218 (386)
Q Consensus 151 ptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~---~~~~~~----~di~~~S~sK~~~g~~g~~~G~i~~~~~ 218 (386)
++|.+.+ +++|.++|++||+++|+||+|+ .+... .....+ .|++ |+||++.+ +|+++ + +
T Consensus 270 ~~G~~~~~~~~l~~l~~l~~~~g~lli~DEv~~g~g~~g~~~~~~~~gv~~~~Di~--t~sK~~l~-----GG~~~-~-~ 340 (472)
T 1ohv_A 270 EGGDNHASDDFFRKLRDISRKHGCAFLVDEVQTGGGSTGKFWAHEHWGLDDPADVM--TFSKKMMT-----GGFFH-K-E 340 (472)
T ss_dssp TTTCBCCCHHHHHHHHHHHHHTTCEEEEECTTTTTTTTSSSSGGGGGCCSSCCSEE--EECGGGSS-----EEEEE-C-G
T ss_pred CCCCCCCCHHHHHHHHHHHHHhCCEEEEeCcccCCCCCCCchhccccCCCCCCCEE--EEcccccc-----CCccC-c-h
Confidence 9998877 9999999999999999999987 23221 111223 6765 67898412 36665 4 4
Q ss_pred hHHHHHHHhhhhcCCCCChhhHHHHHhcCCcHHH--HHHHHHHHHHHHHHHHhhCCCcceEecCCCCCCCchhhhhhccC
Q 016612 219 RLAKELYFLQNAEGSGLAPFDCWICLRGVKTMAL--RVEKQQDNAQKIAEFLASHPRVKKVNYAGLPEHPGHELHYSQAK 296 (386)
Q Consensus 219 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~l~~~~~~~~~~~~~l~~~~~~~i~~~~~~ 296 (386)
.+.. ..........+.++..++++..+++.+.. ..++..+..+.+.+.|++.. .+++ . .....+
T Consensus 341 ~~~~-~~~~~~~~T~~~~~~~~aaa~aal~~~~~~~~~~~~~~~~~~l~~~L~~l~-------~~~~---~---~v~~~~ 406 (472)
T 1ohv_A 341 EFRP-NAPYRIFNTWLGDPSKNLLLAEVINIIKREDLLSNAAHAGKVLLTGLLDLQ-------ARYP---Q---FISRVR 406 (472)
T ss_dssp GGSC-SSSSSSCCSSSSCHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHH-------HHCT---T---TCEEEE
T ss_pred hhcc-cccccccCccCccHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH-------hhCC---C---cEEeec
Confidence 3421 11111112224456665555554443221 12233333344444443310 0011 0 001113
Q ss_pred CCCceEEEEeCCHHhHHHHHhhcCcceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEecc----CChHH
Q 016612 297 GAGSVLSFLTGSLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVGI----EDVND 372 (386)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~~----~~~~~ 372 (386)
+.+.++.+.+.+......+.+.+...|+.+.+++ .++||++++. +++++
T Consensus 407 ~~g~~~~~~~~~~~~~~~~~~~l~~~Gv~~~~~g---------------------------~~~iRi~~~~~~t~e~i~~ 459 (472)
T 1ohv_A 407 GRGTFCSFDTPDESIRNKLISIARNKGVMLGGCG---------------------------DKSIRFRPTLVFRDHHAHL 459 (472)
T ss_dssp EETTEEEEECSSHHHHHHHHHHHHHTTEECEEET---------------------------TTEEEECCCTTCCHHHHHH
T ss_pred CCceEEEEEeCChhHHHHHHHHHHHCCeEEecCC---------------------------CCEEEEECCCCCCHHHHHH
Confidence 4578888887655456677777777777654321 3459998864 67777
Q ss_pred HHHHHHHHHhc
Q 016612 373 LISDLDKALRT 383 (386)
Q Consensus 373 ~i~~l~~~l~~ 383 (386)
+++.|.+++++
T Consensus 460 ~~~~l~~~l~~ 470 (472)
T 1ohv_A 460 FLNIFSDILAD 470 (472)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 77777777764
No 230
>3hl2_A O-phosphoseryl-tRNA(SEC) selenium transferase; selenocysteine, sepsecs, protein-RNA complex, alternative splicing, cytoplasm, protein biosynthesis, pyridoxal phosphate, selenium; HET: PLR SEP; 2.81A {Homo sapiens}
Probab=99.70 E-value=6e-16 Score=142.37 Aligned_cols=201 Identities=11% Similarity=0.073 Sum_probs=134.3
Q ss_pred HHHHhhcCCC---ceEEeCcHHHH-HHHHHHhcCC----CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------
Q 016612 62 SLLAKLDKAD---RALCFTSGMAA-LAAVTHLLGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------ 127 (386)
Q Consensus 62 ~~l~~~~g~~---~~i~~~~gt~a-l~~~~~~~~~----g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------ 127 (386)
++++.+ |.+ ..++++++|.+ +.++++.+++ ||.|++++..|.+.. ..+...|++.+++++.
T Consensus 124 d~L~~~-G~~~~~~~flVnGsTgg~lamilaa~r~~rpg~d~VIvpRn~HKSv~----kAliL~Gl~Pv~V~p~~d~~~~ 198 (501)
T 3hl2_A 124 DIIKLA-GVHTVANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF----KSMITAGFEPVVIENVLEGDEL 198 (501)
T ss_dssp HHHHHT-TCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEEECEEEETTEE
T ss_pred HHHHHc-CCCCCCcEEEECcHHHHHHHHHHHHcCcccCCCCEEEEecchHHHHH----HHHHHcCCeEEEEeeeeccccc
Confidence 444444 765 36777777755 4566776663 499999999998886 4455788998888762
Q ss_pred --CHHHHHhhhCC---Cc-eEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc------CCCCCC-ccEE
Q 016612 128 --DLDEVASAIGP---WT-KLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLELG-ADIV 194 (386)
Q Consensus 128 --d~~~l~~~~~~---~~-~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~------~~~~~~-~di~ 194 (386)
|++++++++++ +. .+|+.+.++|..+.+.|+++|+++|++||+++++|+||+.-... .....| +|++
T Consensus 199 ~id~e~le~aI~e~ga~~i~~V~~Ttt~y~p~~~ddI~eIaeIch~~gIpllVDeAhGah~~~~~~lp~sA~~~GrAD~v 278 (501)
T 3hl2_A 199 RTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQGARVGRIDAF 278 (501)
T ss_dssp EECHHHHHHHHHHHCGGGEEEEEEECSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTCTTCHHHHHHHHHHHHHSCCCEE
T ss_pred CCCHHHHHHHHHhcCCCcEEEEEecCCCCCCcccccHHHHHHHHHHcCCeEEEeCcchhhhhhhhhhHHHHHhcCCCcEE
Confidence 88999998863 23 34444455554456689999999999999999999999753311 122346 9999
Q ss_pred EeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCCh--hhHHHHH--hcCCcHHHHHHHHHHHHHHHHHHHhh
Q 016612 195 MHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAP--FDCWICL--RGVKTMALRVEKQQDNAQKIAEFLAS 270 (386)
Q Consensus 195 ~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~l~~~l~~ 270 (386)
+.|.||++..|-| ++++.++++++.+.+... ..|..... ...++.+ .+.+.+....++..++++++.+.+++
T Consensus 279 VqS~HK~llvpIG--G~ii~~~d~e~l~~~~~~--yPGr~S~Spsldl~~tLL~lGr~Gy~~ll~e~~ela~~L~~~L~~ 354 (501)
T 3hl2_A 279 VQSLDKNFMVPVG--GAIIAGFNDSFIQEISKM--YPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKK 354 (501)
T ss_dssp EEEHHHHHCCCSS--CEEEEESCHHHHHHHHHT--SCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EecccccceeecC--ceEEEeCCHHHHHHHHHh--CCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999877754 566667777666554332 22322222 2233332 23444556666677777777777776
Q ss_pred C
Q 016612 271 H 271 (386)
Q Consensus 271 ~ 271 (386)
.
T Consensus 355 l 355 (501)
T 3hl2_A 355 L 355 (501)
T ss_dssp H
T ss_pred H
Confidence 4
No 231
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=99.67 E-value=2.4e-14 Score=131.25 Aligned_cols=214 Identities=19% Similarity=0.176 Sum_probs=135.6
Q ss_pred CCchHHHHH----HHHHhhcCCCc-----eEEeCcHHHHH-HHHHHhcCCCCEEEecCCCCCcHHHHHh----hhcccCC
Q 016612 53 GNPTRDALE----SLLAKLDKADR-----ALCFTSGMAAL-AAVTHLLGTGEEIVAGDDLYGGTDRLLS----RVTPKTG 118 (386)
Q Consensus 53 g~~~~~~l~----~~l~~~~g~~~-----~i~~~~gt~al-~~~~~~~~~g~~Vlv~~~~~~~~~~~~~----~~~~~~g 118 (386)
|.....++| ++.+++||.+. .+-..||+.|. .+.+++++|||+|+..+..++++..+-. .-....|
T Consensus 94 Gce~vD~iE~la~~rak~lF~a~~A~w~VNVQP~SGs~AN~avy~All~PGD~ilg~~l~~GGHltHg~~~~~~~v~~sg 173 (490)
T 3ou5_A 94 GAEVVDEIELLCQRRALEAFDLDPAQWGVNVQPYSGSPANLAVYTALLQPHDRIMGLDLPDGGHLTHGYMSDVKRISATS 173 (490)
T ss_dssp --CHHHHHHHHHHHHHHHHTTCCTTTEEEECCCSSHHHHHHHHHHHHCC-CCCEECBC----------------------
T ss_pred CChHHHHHHHHHHHHHHHHhCCCccccCCCCCcCCHHHHHHHHHHHHcCCCCEEEecccCCCCcccccccCCCccccccc
Confidence 444444443 55678899884 46778999775 5778899999999988887766542210 0111122
Q ss_pred cE--EEEeCC------CCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC-----CCCcc
Q 016612 119 VV--VKRVNT------CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM-----SPVLS 184 (386)
Q Consensus 119 ~~--~~~v~~------~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~-----~~~~~ 184 (386)
.- ...+.. .|.+++++... .++++|+.-...+| ...|++++.++|++.|.+|++|.+|. .+.++
T Consensus 174 ~~~~~~~Y~vd~~t~~IDyd~~~~~A~~~kPklIi~G~SaY~--r~id~~~~reIAd~vGA~Lm~DmAHiaGLVA~g~~p 251 (490)
T 3ou5_A 174 IFFESMPYKLNPKTGLIDYNQLALTARLFRPRLIIAGTSAYA--RLIDYARMREVCDEVKAHLLADMAHISGLVAAKVIP 251 (490)
T ss_dssp ------CBCEETTTTEECHHHHHHHHHHHCCSEEEECCSSCC--SCCCHHHHHHHHHHHTCEEEEECGGGHHHHHTTSSC
T ss_pred ccccccccccCCCCCcccHHHHHHHHhhcCCCeEEECCccCc--cccCHHHHHHHHhhcccEEEechhhhhhhhcccccC
Confidence 22 222211 28889987765 68999998766654 66899999999999999999999985 56678
Q ss_pred CCCCCCccEEEeccccccccCCCceEEEEEEcCh--------------hHHHHHHHhhhhcCCCCChhh--HHHH---Hh
Q 016612 185 RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGE--------------RLAKELYFLQNAEGSGLAPFD--CWIC---LR 245 (386)
Q Consensus 185 ~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~--------------~~~~~~~~~~~~~~~~~~~~~--~~~~---~~ 245 (386)
+|... +|++++|.||+|.||. +|+|.++++ ++.+++.........+.+... +..+ ..
T Consensus 252 sP~~~-ADvVTtTTHKTLrGPr---GG~Il~~~~~~~~~~k~~~~~~~~~~kkin~aVFPg~qggp~~h~IAAkAVaf~E 327 (490)
T 3ou5_A 252 SPFKH-ADIVTTTTHKTLRGAR---SGLIFYRKGVKAVDPKTGREIPYTFEDRINFAVFPSLQGGPHNHAIAAVAVALKQ 327 (490)
T ss_dssp CGGGT-CSEEEEESSSTTCSCS---CEEEEEECSEEEECC--CCEEECCCHHHHHHHHTTTTCSSCCHHHHHHHHHHHHH
T ss_pred Ccccc-ceEEeccccccccCCC---ceEEEeccccccccccccchhHHHHHHHHHhhcCccccccchHHHHHHHHHHHHH
Confidence 88874 9999999999998875 699998863 355555444332222211111 1111 11
Q ss_pred -cCCcHHHHHHHHHHHHHHHHHHHhhCC
Q 016612 246 -GVKTMALRVEKQQDNAQKIAEFLASHP 272 (386)
Q Consensus 246 -~~~~~~~~~~~~~~~~~~l~~~l~~~~ 272 (386)
....+..+..+..+|++.|.+.|.++.
T Consensus 328 a~~p~fk~Ya~qVv~NAkaLA~~L~~~G 355 (490)
T 3ou5_A 328 ACTPMFREYSLQVLKNARAMADALLERG 355 (490)
T ss_dssp HHSHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHhHhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 222456777888899999999998864
No 232
>3bc8_A O-phosphoseryl-tRNA(SEC) selenium transferase; disorder-order transition, phosphate-loop, pyridoxal phospha selenocysteine synthase (SECS, sepsecs); HET: LLP; 1.65A {Mus musculus} SCOP: c.67.1.9 PDB: 3bca_A* 3bcb_A*
Probab=99.62 E-value=3.5e-15 Score=139.06 Aligned_cols=210 Identities=12% Similarity=0.049 Sum_probs=135.7
Q ss_pred hHHHHHHHHHhhcCCCc---eEEeCcHH-HHHHHHHHhcCC----CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC
Q 016612 56 TRDALESLLAKLDKADR---ALCFTSGM-AALAAVTHLLGT----GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC 127 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~---~i~~~~gt-~al~~~~~~~~~----g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~ 127 (386)
+.+.+..++.+.+|.++ .++++++| .++.++++.+++ ++.|++++..|.+.. +.+...|+..++++..
T Consensus 99 ~e~~~~~~~~~~lGlp~~~~~~lV~GaT~~~~a~~L~aar~~~~~~~~viv~r~aHkSv~----kAl~l~Gl~p~~v~~~ 174 (450)
T 3bc8_A 99 ITNSLVLNVIKLAGVHSVASCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCF----KSMVTAGFEPVVIENV 174 (450)
T ss_dssp HHHHHHHHHHHHHTCTTCCEEEEESSCHHHHHHHHHHHHHHHCTTCCEEEEECCCCHHHH----HHHHHTTCEEEEECCE
T ss_pred HHHHHHHHHHHhCCCCCCceEEEECCHHHHHHHHHHHHcchhhcCCCEEEEECCcHHHHH----HHHHHcCCeeEEEEee
Confidence 34566777777778773 47777777 445555555443 899999999998886 5556788888888652
Q ss_pred --------CHHHHHhhhCC---CceEEEEeCC-CCCCcccccHHHHHHHHHHcCCEEEEeCCCCCCCcc------CCCC-
Q 016612 128 --------DLDEVASAIGP---WTKLVWVESP-TNPRQQICDIRKIAEMAHAHGALLLVDNSIMSPVLS------RPLE- 188 (386)
Q Consensus 128 --------d~~~l~~~~~~---~~~~v~~~~~-~nptG~~~~l~~i~~la~~~~~~li~D~a~~~~~~~------~~~~- 188 (386)
|++++++++.+ +..++++.+| ++.+|.+.|+++|+++|++||+++++|+||+..... ....
T Consensus 175 ~~~~~~~id~~~le~aI~~~~~~~~~~Vv~t~t~~g~g~~ddl~~Ia~ia~~~gi~l~VD~A~G~~~~~~~~l~~~a~~~ 254 (450)
T 3bc8_A 175 LEGDELRTDLKAVEAKIQELGPEHILCLHSTTACFAPRVPDRLEELAVICANYDIPHVVNNAYGLQSSKCMHLIQQGARV 254 (450)
T ss_dssp EETTEEECCHHHHHHHHHHHCGGGEEEEEEESSCCTTBCCCCHHHHHHHHHHHTCCEEEECTTTTTCHHHHHHHHHHHHH
T ss_pred ecCccCCcCHHHHHHHHHhcCCCCEEEEEEECCcCCCceecCHHHHHHHHHHCCCeEEEECCCchhhhhhHhHHHHHhcc
Confidence 89999999863 2344444444 444568899999999999999999999999853211 1112
Q ss_pred CCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHh--cCCcHHHHHHHHHHHHHHHHH
Q 016612 189 LGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLR--GVKTMALRVEKQQDNAQKIAE 266 (386)
Q Consensus 189 ~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~ 266 (386)
.++|+++.|.||++..+.+ ++++..+++...+..........+..+....|..+. +.+.+....++..+.++.+.+
T Consensus 255 ~~AD~~v~S~HK~l~a~~~--~~~l~~rd~~~~~~~~~~~~g~~s~SpsL~l~~~l~~~G~~g~~~~i~~~~~~a~~l~~ 332 (450)
T 3bc8_A 255 GRIDAFVQSLDKNFMVPVG--GAIIAGFNEPFIQDISKMYPGRASASPSLDVLITLLSLGCSGYRKLLKERKEMFVYLST 332 (450)
T ss_dssp SCCCEEEEEHHHHHSCCSS--CEEEEESCHHHHHHHHHHSCSCBCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEECCccCCCchhc--cEEEEecCHHHHHHHHHHhhcCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3789999999999988766 788887766655444322111111111122222222 222233333444566667777
Q ss_pred HHhhC
Q 016612 267 FLASH 271 (386)
Q Consensus 267 ~l~~~ 271 (386)
.+++.
T Consensus 333 ~l~~~ 337 (450)
T 3bc8_A 333 QLKKL 337 (450)
T ss_dssp HHHHH
T ss_pred HHHhh
Confidence 66654
No 233
>4ao9_A Beta-phenylalanine aminotransferase; HET: PLP; 1.50A {Variovorax paradoxus} PDB: 4aoa_A*
Probab=99.59 E-value=1.3e-14 Score=136.68 Aligned_cols=280 Identities=15% Similarity=0.101 Sum_probs=167.7
Q ss_pred hHHHHHHHHHhhc-CCCceEEeCcHHHHHHHHHHh---cCCCCEEEecCCCCCcHHHHHhhh--cccCCcEEEEeCCCCH
Q 016612 56 TRDALESLLAKLD-KADRALCFTSGMAALAAVTHL---LGTGEEIVAGDDLYGGTDRLLSRV--TPKTGVVVKRVNTCDL 129 (386)
Q Consensus 56 ~~~~l~~~l~~~~-g~~~~i~~~~gt~al~~~~~~---~~~g~~Vlv~~~~~~~~~~~~~~~--~~~~g~~~~~v~~~d~ 129 (386)
...++.+.+++.+ +.+...+++||++|....+.+ ....++|+..+.+|++........ ......++..++..|+
T Consensus 128 ~~~~lae~l~~~~p~~~~v~f~~SGsEA~e~AiklAr~~tgr~~ii~~~~~yHG~t~~~~~~~~~~~~~~~~~~~p~nd~ 207 (454)
T 4ao9_A 128 LEGRLARLICERFPQIEQLRFTNSGTEANLMALTAALHFTGRRKIVVFSGGYHGGVLGFGARPSPTTVPFDFLVLPYNDA 207 (454)
T ss_dssp SHHHHHHHHHHHSTTCSEEEEESSHHHHHHHHHHHHHHHHTCCEEEEETTCBCSTTCBBSSSBCTTSCCSEEEEECTTCH
T ss_pred HHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHHHHHHhcccCCeEEEEeCCcCCccccccccccCccCCCCcccCCCchH
Confidence 4556677777766 445788889999997533332 234567887777776642110000 1112235667777899
Q ss_pred HHHHhhhC---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCCCCcc-----CCCCCCccEEEec
Q 016612 130 DEVASAIG---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMSPVLS-----RPLELGADIVMHS 197 (386)
Q Consensus 130 ~~l~~~~~---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~~~~~-----~~~~~~~di~~~S 197 (386)
+.+++.+. +++.+|+++......|.+.| +++|.++|++||+++|+||++. |-.. ......+|+++
T Consensus 208 ~~l~~~l~~~~~~iAavIvEPv~g~~G~~~p~~~fL~~lr~lc~~~g~lLI~DEV~t-GR~G~~~a~e~~gv~PDi~t-- 284 (454)
T 4ao9_A 208 QTARAQIERHGPEIAVVLVEPMQGASGCIPGQPDFLQALRESATQVGALLVFDEVMT-SRLAPHGLANKLGIRSDLTT-- 284 (454)
T ss_dssp HHHHHHHHHTGGGEEEEEECSEESTTTCEECCHHHHHHHHHHHHHHTCEEEEECTTG-GGGSTTCHHHHHTCCCSEEE--
T ss_pred HHHHHHHhhcCCceEEEEeccccCCCCccCCchhhHHHHHHHHhhcCCEEEEECCCc-CCCccccchhccCCCCcEEE--
Confidence 99998875 57889999998888898876 9999999999999999999986 3221 11234568885
Q ss_pred cccccccCCCceEEEEEEcChhHHHHHHHhh----hhcCCCCChhhHHHHHhcCCcH--HHHHHHHHHHHHHHHHHHhhC
Q 016612 198 ATKFIAGHSDVMAGVLAVKGERLAKELYFLQ----NAEGSGLAPFDCWICLRGVKTM--ALRVEKQQDNAQKIAEFLASH 271 (386)
Q Consensus 198 ~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~l~~~ 271 (386)
++|.++| |+.+|.+.++ +++++.+.... .....+.++...++.+..++.+ ....++..+..+.+.+.|++.
T Consensus 285 ~gK~lgg--G~Piga~~~~-~ei~~~~~~~~~~~~h~~T~~gnPla~AAala~L~~l~~~~~~~~~~~~g~~l~~~L~~l 361 (454)
T 4ao9_A 285 LGKYIGG--GMSFGAFGGR-ADVMALFDPRTGPLAHSGTFNNNVMTMAAGYAGLTKLFTPEAAGALAERGEALRARLNAL 361 (454)
T ss_dssp EEGGGGT--TSSCEEEEEC-HHHHGGGCTTTCSCCCCCTTTTCHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred eccccCC--CCcceeeeeH-HHHHHHHhhccCCccccCCCCCCHHHHHHHHHHHHHHhccChhHHHHHHHHHHHHHHHHH
Confidence 5899865 4557888876 55655442211 1112234555555554443221 223344445555555555432
Q ss_pred CCcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------------CHHhHHHHHhhcCcceeccCCCCcccccccc
Q 016612 272 PRVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------------SLALSKHVVETTKYFSITVSFGSVKSLISMP 338 (386)
Q Consensus 272 ~~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------------~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p 338 (386)
.. ..+-.. ..++.|.++.+.+. +......+...+...|+.+.+...
T Consensus 362 ~~----~~~~~~----------~vrg~G~m~gi~f~~~~~~~~~~~~~~d~~~~~~~~~~ll~~Gv~~~p~~~------- 420 (454)
T 4ao9_A 362 CA----NEGVAM----------QFTGIGSLMNAHFVQGDVRSSEDLAAVDGRLRQLLFFHLLNEDIYSSPRGF------- 420 (454)
T ss_dssp HH----HHTBSC----------EEEEETTEEEEESCCSCCCSGGGGTTCCHHHHHHHHHHHHHTTEECCTTCE-------
T ss_pred Hh----hCCCCE----------EEeeeceEEEEEEecCCCCCHHHHHhhhHHHHHHHHHHHHHCCEEEcCCCC-------
Confidence 10 000000 11345667776651 233445666667777876544322
Q ss_pred ccccCCCCCHHHHHhcCCCCCeEEEEe--ccCChHHHHHHHHHHHhcC
Q 016612 339 CFMSHASIPVEVRQARGLTEDLVRISV--GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 339 ~~~~~~~~~~~~~~~~~~~~~~iRis~--~~~~~~~~i~~l~~~l~~~ 384 (386)
+.++. +.+++|++++.++++|.+.
T Consensus 421 ----------------------~~~s~~~T~~dId~~l~al~~~l~~~ 446 (454)
T 4ao9_A 421 ----------------------VVLSLPLTDADIDRYVAAIGSFIGGH 446 (454)
T ss_dssp ----------------------EECCTTCCHHHHHHHHHHHHHHHHHS
T ss_pred ----------------------EEEeCCCCHHHHHHHHHHHHHHHHhc
Confidence 32332 3478899999999988764
No 234
>4atq_A 4-aminobutyrate transaminase; transferase; HET: PLP; 2.75A {Arthrobacter aurescens} PDB: 4atp_A*
Probab=99.58 E-value=5.1e-14 Score=133.10 Aligned_cols=290 Identities=18% Similarity=0.180 Sum_probs=169.4
Q ss_pred hHHHHHHHHHhhcCC---CceEEeCcHHHHHHHHHH---hcCCCCEEEecCCCCCcHH-HHHhhhcc----------cCC
Q 016612 56 TRDALESLLAKLDKA---DRALCFTSGMAALAAVTH---LLGTGEEIVAGDDLYGGTD-RLLSRVTP----------KTG 118 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~---~~~i~~~~gt~al~~~~~---~~~~g~~Vlv~~~~~~~~~-~~~~~~~~----------~~g 118 (386)
...++.+.|.++... +..++++||++|+...+. .....++|+.-+.+|++.. ..+ .... ...
T Consensus 108 ~~~~lae~L~~~~p~~~~~~v~f~~sGsEA~e~AlklAr~~t~r~~ii~~~~~yHG~t~~al-s~t~~~~~~~~~~~p~~ 186 (456)
T 4atq_A 108 GYVAVTEQLNRLTPGDHAKRTVLFNSGAEAVENAVKVARLATGRDAVVAFDHAYHGRTNLTM-ALTAKAMPYKTNFGPFA 186 (456)
T ss_dssp HHHHHHHHHHHHSSCSSCEEEEEESSHHHHHHHHHHHHHHHHCCCEEEEETTCCCCSSHHHH-HHCCCCTTTTTTSCSCC
T ss_pred HHHHHHHHHHHhCCCCCCcEEEEeCChHHHHHHHHHHHhhhhcCCeEEEEecccCCcccccc-ccccCccccccCCCCcc
Confidence 455677778887743 356778999999864332 2344567887777776642 222 1110 011
Q ss_pred cEEEEeCCC-----------CHH-------HHHhhhC-CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEe
Q 016612 119 VVVKRVNTC-----------DLD-------EVASAIG-PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 119 ~~~~~v~~~-----------d~~-------~l~~~~~-~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D 175 (386)
..+..++.. +.+ .+++.+. +++.+|+++......|.+.+ +++|.++|++||+++|+|
T Consensus 187 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~iAAvivEPiqg~gG~~~p~~~fl~~lr~lc~~~gillI~D 266 (456)
T 4atq_A 187 PEVYRMPMSYPFREENPEITGAEAAKRAITMIEKQIGGDQVAAIIIEPIQGEGGFIVPAEGFLPALSEWAKEKGIVFIAD 266 (456)
T ss_dssp SSEEEECCCCGGGCSSTTCCHHHHHHHHHHHHHHHTCGGGEEEEEECSSBTTTTCBCCCTTHHHHHHHHHHHHTCEEEEE
T ss_pred ccceecccccccccCCCcccHHHHHHHHHHHHHHhhcCCceEEEEeccccCCCCccccchhhhHHHHHHHhhcCCceEec
Confidence 234444432 122 2333333 47899999998887888764 899999999999999999
Q ss_pred CCCCC-C---Ccc--CCCCCCccEEEeccccccccCCCceEEEEEEcChhHHHHHHHhhhhcCCCCChhhHHHHHhcCCc
Q 016612 176 NSIMS-P---VLS--RPLELGADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFLQNAEGSGLAPFDCWICLRGVKT 249 (386)
Q Consensus 176 ~a~~~-~---~~~--~~~~~~~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (386)
|++.. + .+. ......+|+++. +|.++| |+.+|.++++ +++.+.+.........+.++...++++..++.
T Consensus 267 EV~tG~GRtG~~~a~e~~gv~PDivt~--gK~lgg--g~P~~av~~~-~~i~~~~~~~~~~~Tf~gnpla~aaala~L~~ 341 (456)
T 4atq_A 267 EVQSGFCRTGEWFAVDHEGVVPDIITM--AKGIAG--GLPLSAITGR-ADLLDAVHPGGLGGTYGGNPVACAAALAAIDT 341 (456)
T ss_dssp CTTTTTTTTSSSSGGGGTTCCCSEEEE--CGGGGT--TSSCEEEEEE-HHHHTTSCTTSSCCSSSSCHHHHHHHHHHHHH
T ss_pred ccccccCCccccccccccCCCCchhhh--hhcccC--cCCceeeEec-HHHHhcccccCCCCCCCCChHHHHhhHHHHHH
Confidence 99863 2 222 122345799865 798864 4557888877 44554443333333345566777766666554
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCC-CcceEecCCCCCCCchhhhhhccCCCCceEEEEeC-------CHHhHHHHHhhcCc
Q 016612 250 MALRVEKQQDNAQKIAEFLASHP-RVKKVNYAGLPEHPGHELHYSQAKGAGSVLSFLTG-------SLALSKHVVETTKY 321 (386)
Q Consensus 250 ~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-------~~~~~~~l~~~l~~ 321 (386)
+.. +.+.++++.+.+++.+.- .+...+ + ...++ ...+.++.|.++.+.+. +.+...++.+.+..
T Consensus 342 i~~--~~l~~~~~~~g~~l~~~L~~l~~~~-~-~~~~~----~v~~VRG~Gl~~giel~~~~~~~~~~~~~~~v~~~~~~ 413 (456)
T 4atq_A 342 MEQ--HDLNGRARHIEELALGKLRELAAEL-S-AGGGS----VVGDIRGRGAMLAIELVQPGSKEPNAELTKAVAAACLK 413 (456)
T ss_dssp HHH--TTHHHHHHHHHHHHHHHHHHHHHHC-C----------CEEEEEEETTEEEEEEBCTTSCCBCHHHHHHHHHHHHH
T ss_pred Hhh--ccHHHHHHHHHHHHHHHHHHHHHhc-c-cccCC----ceEEeeecceEEEEEEecCCCCCcCHHHHHHHHHHHHH
Confidence 322 233444444433332210 000000 0 00000 01123567888888872 34557788888888
Q ss_pred ceeccCCCCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 322 FSITVSFGSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 322 ~gi~~~~G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
+|+.+...+ ...+.||+.+. .+++++.++.|.++|++.
T Consensus 414 ~Gvl~~~~g-------------------------~~~~~irl~PpL~it~~~id~~l~~l~~al~a~ 455 (456)
T 4atq_A 414 EGVIILTCG-------------------------TYGNVIRLLPPLVISDELLIDGLEVLAAAIKAH 455 (456)
T ss_dssp TTEECEEEC-------------------------TTSCEEEECCCTTCCHHHHHHHHHHHHHHHHHC
T ss_pred CCCEEEecC-------------------------CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHhh
Confidence 888654321 12345888764 488889999999999763
No 235
>4e3q_A Pyruvate transaminase; aminotransferase, transferase; HET: PMP; 1.90A {Vibrio fluvialis} PDB: 4e3r_A* 3nui_A
Probab=99.51 E-value=1.4e-13 Score=130.54 Aligned_cols=314 Identities=16% Similarity=0.160 Sum_probs=178.5
Q ss_pred CCCCCCcccceeeeeeeecCCCCCCCCccccCC-C--CchHHHHHHHHHhhcCC--CceEEeCcHHHHHHHHHHhc----
Q 016612 20 FDPYGALSTPLYQTATFKQPSATENGPYDYTRS-G--NPTRDALESLLAKLDKA--DRALCFTSGMAALAAVTHLL---- 90 (386)
Q Consensus 20 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~~~-g--~~~~~~l~~~l~~~~g~--~~~i~~~~gt~al~~~~~~~---- 90 (386)
...+|.-+|.+.++......+ ...|... + ++...++.+.|.++.+. +.+.+++||++|+...+.+.
T Consensus 78 ~~~lGh~~p~v~~Ai~~q~~~-----l~~~~~~~~~~~~~~~~lAe~L~~~~p~~~~~v~f~~sGsEA~e~AiKlAr~~~ 152 (473)
T 4e3q_A 78 NMVAGFDHKGLIDAAKAQYER-----FPGYHAFFGRMSDQTVMLSEKLVEVSPFDSGRVFYTNSGSEANDTMVKMLWFLH 152 (473)
T ss_dssp TCTTCSCCHHHHHHHHHHHHH-----CCCCCCCTTEEEHHHHHHHHHHHHHSSCSSCEEEEESSHHHHHHHHHHHHHHHH
T ss_pred HhhccCCCHHHHHHHHHHHHh-----cccccccccccCHHHHHHHHHHHhhCCCCccEEEEeCchHHHHHHHHHHHHHHH
Confidence 455777777766543221111 1112222 2 23566788888888754 47888899999986433321
Q ss_pred ----CC-CCEEEecCCCCCcH-HHHHhhhc-----ccCC---cEEEEeCCC------------------CHHHHHhhhC-
Q 016612 91 ----GT-GEEIVAGDDLYGGT-DRLLSRVT-----PKTG---VVVKRVNTC------------------DLDEVASAIG- 137 (386)
Q Consensus 91 ----~~-g~~Vlv~~~~~~~~-~~~~~~~~-----~~~g---~~~~~v~~~------------------d~~~l~~~~~- 137 (386)
++ ..+|+.-...|++. ...+ ... +.++ .....++.. ..+++++.+.
T Consensus 153 ~~~g~~~r~~ii~~~~~yHG~t~~a~-s~tg~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ 231 (473)
T 4e3q_A 153 AAEGKPQKRKILTRWNAYHGVTAVSA-SMTGKPYNSVFGLPLPGFVHLTCPHYWRYGEEGETEEQFVARLARELEETIQR 231 (473)
T ss_dssp HHTTCTTCCEEEEETTCCCCSSHHHH-HHSCCGGGGGGTCSCTTEEEECCCCHHHHSCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCcceEEEeeceECCCccccc-cccccccccccCCCCCcccccCCCcccccccccchhhHHHHHHHHHHHHHHHh
Confidence 12 34677777777653 3222 111 0111 122233221 1234444432
Q ss_pred ---CCceEEEEeCCCCCCccccc----HHHHHHHHHHcCCEEEEeCCCCC-CCcc-----CCCCCCccEEEecccccccc
Q 016612 138 ---PWTKLVWVESPTNPRQQICD----IRKIAEMAHAHGALLLVDNSIMS-PVLS-----RPLELGADIVMHSATKFIAG 204 (386)
Q Consensus 138 ---~~~~~v~~~~~~nptG~~~~----l~~i~~la~~~~~~li~D~a~~~-~~~~-----~~~~~~~di~~~S~sK~~~g 204 (386)
+++.+|+++......|.+.+ +++|.++|++||+++|.||++.. |-.. ......+|+++ ++|.++|
T Consensus 232 ~~~~~iAavi~EPiqg~gG~~~p~~~fl~~lr~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~PDi~t--~~K~l~g 309 (473)
T 4e3q_A 232 EGADTIAGFFAEPVMGAGGVIPPAKGYFQAILPILRKYDIPVISDEVICGFGRTGNTWGCVTYDFTPDAII--SSKNLTA 309 (473)
T ss_dssp HCGGGEEEEEECSSBSTTTSBCCCTTHHHHHHHHHHHTTCCEEEECTTTSSSTTSSSCHHHHTTCCCSEEE--ECGGGGT
T ss_pred hCCCceEEEEeCCccCCCCceeCCHHHHHHHHHHhcccceEEeccCccccCCcccchhHHHhcCCCCChHH--hcccccC
Confidence 56889999998887788764 89999999999999999999863 2221 12234579986 5899864
Q ss_pred CCCceEEEEEEcChhHHHHHHHhh-------hhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhhCCCcceE
Q 016612 205 HSDVMAGVLAVKGERLAKELYFLQ-------NAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKIAEFLASHPRVKKV 277 (386)
Q Consensus 205 ~~g~~~G~i~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 277 (386)
+++-+|.++++ +++.+.+.... .....+-++..+++++..++.+.. +.+.++++.+.+++.+.-
T Consensus 310 -G~~Pl~av~~~-~~i~~~~~~~~~~~~~~~hg~T~~Gnpla~Aaala~L~~i~~--~~l~~~~~~~g~~l~~~L----- 380 (473)
T 4e3q_A 310 -GFFPMGAVILG-PELSKRLETAIEAIEEFPHGFTASGHPVGCAIALKAIDVVMN--EGLAENVRRLAPRFEERL----- 380 (473)
T ss_dssp -TSSCCEEEEEC-HHHHHHHHHHHHHHSCCCCCCTTTTCHHHHHHHHHHHHHHHH--SSHHHHHHHHHHHHHHHH-----
T ss_pred -CCCCccccccc-HHHHHHhccccccccccccCCCCCCCcchhhhhhhhhhhhcc--ccHHHHHHHHHHHHHHHH-----
Confidence 22557888876 55665553321 122234556666666665553322 233444444444443311
Q ss_pred ecCCCCCCCchhhhhhccCCCCceEEEEeC-----------CHHhHHHHHhhcCcceeccCCCCccccccccccccCCCC
Q 016612 278 NYAGLPEHPGHELHYSQAKGAGSVLSFLTG-----------SLALSKHVVETTKYFSITVSFGSVKSLISMPCFMSHASI 346 (386)
Q Consensus 278 ~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~-----------~~~~~~~l~~~l~~~gi~~~~G~~~~~~~~p~~~~~~~~ 346 (386)
..+.+.+.+ .+.++.|.++.+.+- +.....++.+.+..+|+.+++.+
T Consensus 381 --~~l~~~~~v----~~vRG~Gl~~gielv~~~~~~~~~~~~~~~~~~~~~~~~~~Gll~~~~g---------------- 438 (473)
T 4e3q_A 381 --KHIAERPNI----GEYRGIGFMWALEAVKDKASKTPFDGNLSVSERIANTCTDLGLICRPLG---------------- 438 (473)
T ss_dssp --HHHTTSTTE----EEEEEETTEEEEEECSBTTTTBCCCGGGCHHHHHHHHHHHTTEECEEET----------------
T ss_pred --HHHhcCCCe----eEEeecceEEEEEEecCccccccccccHHHHHHHHHHHHHCCcEEEecC----------------
Confidence 001111211 123567788888761 12345678888888888654322
Q ss_pred CHHHHHhcCCCCCeEEEEe----ccCChHHHHHHHHHHHhcC
Q 016612 347 PVEVRQARGLTEDLVRISV----GIEDVNDLISDLDKALRTG 384 (386)
Q Consensus 347 ~~~~~~~~~~~~~~iRis~----~~~~~~~~i~~l~~~l~~~ 384 (386)
+.+|+++ +.++++++++.+.++|+++
T Consensus 439 ------------~~i~l~PPL~it~~eid~~~~~l~~al~~v 468 (473)
T 4e3q_A 439 ------------QSVVLCPPFILTEAQMDEMFDKLEKALDKV 468 (473)
T ss_dssp ------------TEEEECCCTTCCHHHHHHHHHHHHHHHHHH
T ss_pred ------------CEEEEeCCCCCCHHHHHHHHHHHHHHHHHH
Confidence 2266654 4588899999999988763
No 236
>4a0g_A Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; BIO3-BIO1, biotin synthesis; HET: PLP; 2.50A {Arabidopsis thaliana} PDB: 4a0h_A* 4a0r_A* 4a0f_A*
Probab=99.32 E-value=1.6e-11 Score=124.13 Aligned_cols=207 Identities=12% Similarity=0.076 Sum_probs=120.2
Q ss_pred HHHHhhhC--------CCceEEEEeCC-CCCCccccc----HHHHHHHHHHcCCEEEEeCCCC-CCCccCC-----CCCC
Q 016612 130 DEVASAIG--------PWTKLVWVESP-TNPRQQICD----IRKIAEMAHAHGALLLVDNSIM-SPVLSRP-----LELG 190 (386)
Q Consensus 130 ~~l~~~~~--------~~~~~v~~~~~-~nptG~~~~----l~~i~~la~~~~~~li~D~a~~-~~~~~~~-----~~~~ 190 (386)
+++++.+. +++.+|+++.. ++..|.+.+ +++|.++|++||+++|+||++. .|..... ....
T Consensus 577 ~~le~~l~~~~~~~~~~~iaavi~Epvvqg~gG~~~~~~~~L~~l~~lc~~~gilLI~DEV~tGfGRtG~~fa~e~~gv~ 656 (831)
T 4a0g_A 577 AYLSKHLQEHSGVRQSAHVGALIIEPVIHGAGGMHMVDPLFQRVLVNECRNRKIPVIFDEVFTGFWRLGVETTTELLGCK 656 (831)
T ss_dssp HHHHHHC---------CEEEEEEECCSEETTTTSEEECHHHHHHHHHHHHHTTCCEEEECTTTTTTTTSBSSTHHHHSSC
T ss_pred HHHHHHHHhhhhhcCCCcEEEEEEecccccCCCCccCCHHHHHHHHHHHHHcCCeEEEEcCccccccCCCchhhHhcCCC
Confidence 45666663 46789999987 888888764 8999999999999999999976 2222211 1234
Q ss_pred ccEEEeccccccccCCCceEEEEEEcChhHHHHHHHh------hhhcCCCCChhhHHHHHhcCCcHHHHHHHHHHHHHHH
Q 016612 191 ADIVMHSATKFIAGHSDVMAGVLAVKGERLAKELYFL------QNAEGSGLAPFDCWICLRGVKTMALRVEKQQDNAQKI 264 (386)
Q Consensus 191 ~di~~~S~sK~~~g~~g~~~G~i~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 264 (386)
.|++ +++|.++| +.+.+|+++++ +++.+.+... ......+.++..+++++..++.+.. +...++.
T Consensus 657 PDii--tlsK~L~g-G~~Plgav~~~-~~i~~~~~~~~~~~~~~hg~T~~g~Pla~Aaala~L~~i~~--~~l~~~~--- 727 (831)
T 4a0g_A 657 PDIA--CFAKLLTG-GMVPLAVTLAT-DAVFDSFSGDSKLKALLHGHSYSAHAMGCATAAKAIQWFKD--PETNHNI--- 727 (831)
T ss_dssp CSEE--EECGGGGT-TSSCCEEEEEC-HHHHHTTCSSCGGGSCCCCCTTTTCHHHHHHHHHHHHHHHC--TTTCTTB---
T ss_pred CcEE--EEeccccc-CccCcEEEEEC-HHHHHHHhcccccccceeecCCcccHHHHHHHHHHHHHHHh--hHHHHHH---
Confidence 6877 47999965 22578999987 4455543221 1122234455555554443322110 0000000
Q ss_pred HHHHhhCCCcceEecCC--------CCCCCchhhhhhccCCCCceEEEEeCCH--------HhHHHHHhhcCcceeccCC
Q 016612 265 AEFLASHPRVKKVNYAG--------LPEHPGHELHYSQAKGAGSVLSFLTGSL--------ALSKHVVETTKYFSITVSF 328 (386)
Q Consensus 265 ~~~l~~~~~~~~~~~~~--------l~~~~~~~i~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~l~~~gi~~~~ 328 (386)
.+. ...+... +..++. ....++.|.++.+.+... ....++.+.+...|+.+++
T Consensus 728 ----~~~---~~~l~~~l~~~l~~~l~~~~~----v~~vrg~Gl~~~iel~~~~~~~~~~~~~a~~~~~~l~e~Gv~v~p 796 (831)
T 4a0g_A 728 ----TSQ---GKTLRELWDEELVQQISSHSA----VQRVVVIGTLFALELKADASNSGYASLYAKSLLIMLREDGIFTRP 796 (831)
T ss_dssp ----CTT---SSBBCCCSCHHHHHHHHHSTT----EEEEEEETTEEEEEEC---------CHHHHHHHHHHHHTTEECCC
T ss_pred ----HHH---HHHHHHHHHHHHHHHHhhCCC----ceeEeecccEEEEEEecCccccccchHHHHHHHHHHHHCCcEEEe
Confidence 000 0011000 011111 112245678888887321 2456777888888887654
Q ss_pred CCccccccccccccCCCCCHHHHHhcCCCCCeEEEEec----cCChHHHHHHHHHHHhcC
Q 016612 329 GSVKSLISMPCFMSHASIPVEVRQARGLTEDLVRISVG----IEDVNDLISDLDKALRTG 384 (386)
Q Consensus 329 G~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~iRis~~----~~~~~~~i~~l~~~l~~~ 384 (386)
++ +.||+++. .++++++++.|.+++++.
T Consensus 797 ~g----------------------------~~lrl~pp~~~t~e~id~~~~~l~~~l~~l 828 (831)
T 4a0g_A 797 LG----------------------------NVIYLMCGPCTSPEICRRLLTKLYKRLGEF 828 (831)
T ss_dssp BT----------------------------TEEEEECCTTCCHHHHHHHHHHHHHHHTTT
T ss_pred cC----------------------------CEEEEECCCCCCHHHHHHHHHHHHHHHHHh
Confidence 32 34888853 488888888888888765
No 237
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=82.08 E-value=6.5 Score=28.15 Aligned_cols=90 Identities=21% Similarity=0.178 Sum_probs=56.3
Q ss_pred ceEEeCcHHHHHHHHHHhcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
..++++.|.-+..++..+.+.| ..|.+.+..-... .. +...++.....+..+.+++.+.+. +..+|+...+..
T Consensus 7 ~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~----~~-~~~~~~~~~~~d~~~~~~~~~~~~-~~d~vi~~~~~~ 80 (118)
T 3ic5_A 7 NICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAAL----AV-LNRMGVATKQVDAKDEAGLAKALG-GFDAVISAAPFF 80 (118)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHH----HH-HHTTTCEEEECCTTCHHHHHHHTT-TCSEEEECSCGG
T ss_pred eEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHH----HH-HHhCCCcEEEecCCCHHHHHHHHc-CCCEEEECCCch
Confidence 4566666665555555666667 5666544322111 12 225677888888888888988875 567777655322
Q ss_pred CCcccccHHHHHHHHHHcCCEEE
Q 016612 151 PRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li 173 (386)
....+.+.|.+.|+..+
T Consensus 81 ------~~~~~~~~~~~~g~~~~ 97 (118)
T 3ic5_A 81 ------LTPIIAKAAKAAGAHYF 97 (118)
T ss_dssp ------GHHHHHHHHHHTTCEEE
T ss_pred ------hhHHHHHHHHHhCCCEE
Confidence 23678888888887654
No 238
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=66.86 E-value=37 Score=29.72 Aligned_cols=98 Identities=13% Similarity=0.109 Sum_probs=54.2
Q ss_pred ceEEeCcHH--HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc------CCcEEEEeCCCCHHHHHhhhCCCceEE
Q 016612 72 RALCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK------TGVVVKRVNTCDLDEVASAIGPWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt--~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~------~g~~~~~v~~~d~~~l~~~~~~~~~~v 143 (386)
..+++++|+ -+-+++..+++.|..|++..-.-............. .+++++..+..|.+++.+++. ++.+|
T Consensus 26 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~V 104 (351)
T 3ruf_A 26 KTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMK-GVDHV 104 (351)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTT-TCSEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhc-CCCEE
Confidence 345555555 344566667788888764332111111111111111 567888888889999999887 56676
Q ss_pred EEeCCCC-CCcccc-----------cHHHHHHHHHHcCC
Q 016612 144 WVESPTN-PRQQIC-----------DIRKIAEMAHAHGA 170 (386)
Q Consensus 144 ~~~~~~n-ptG~~~-----------~l~~i~~la~~~~~ 170 (386)
+-..... +..... -...+.+.|++.++
T Consensus 105 ih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 143 (351)
T 3ruf_A 105 LHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQV 143 (351)
T ss_dssp EECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6443221 111101 13457888888765
No 239
>1tks_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, 3,4-dihydroxy-2-B 4-phosphate synthase, synthetic gene, ISO; 1.60A {Candida albicans} SCOP: d.115.1.2 PDB: 1tku_A* 2ris_A 2riu_A*
Probab=66.62 E-value=11 Score=30.54 Aligned_cols=43 Identities=12% Similarity=0.147 Sum_probs=34.8
Q ss_pred HHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.++..-.+..++.+-..|..|....+.++.++|++||+.++.
T Consensus 152 LarLAGl~Pa~vicEi~~~~dG~mar~~~l~~fA~~h~l~iit 194 (204)
T 1tks_A 152 LSTLAGLQPAGVICELVRDEDGLMMRLDDCIQFGKKHGIKIIN 194 (204)
T ss_dssp HHHHTTSCSBEEEEEBBCTTTCCBCBHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCceEEEEEEeECCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 4444445677888877778899999999999999999998874
No 240
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=65.63 E-value=22 Score=30.06 Aligned_cols=88 Identities=14% Similarity=0.083 Sum_probs=49.6
Q ss_pred hcCCC-ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC--CHHHHHhhhC----
Q 016612 67 LDKAD-RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC--DLDEVASAIG---- 137 (386)
Q Consensus 67 ~~g~~-~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~--d~~~l~~~~~---- 137 (386)
+|..+ +.+++|+|+.+| .....+.+.|-+|++.+-.-....... ..++..|.+...+..+ |.+++++.++
T Consensus 4 ~f~L~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~-~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (255)
T 4g81_D 4 LFDLTGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESV-DTLTRKGYDAHGVAFDVTDELAIEAAFSKLDA 82 (255)
T ss_dssp TTCCTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-HHHHHTTCCEEECCCCTTCHHHHHHHHHHHHH
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHH
Confidence 34444 577788888777 355668899999988654322222222 2233445566655544 7777766654
Q ss_pred --CCceEEEEeCCCCCCccc
Q 016612 138 --PWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 138 --~~~~~v~~~~~~nptG~~ 155 (386)
.+...++-+...++.+.+
T Consensus 83 ~~G~iDiLVNNAG~~~~~~~ 102 (255)
T 4g81_D 83 EGIHVDILINNAGIQYRKPM 102 (255)
T ss_dssp TTCCCCEEEECCCCCCCCCG
T ss_pred HCCCCcEEEECCCCCCCCCh
Confidence 256666544333333333
No 241
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=65.09 E-value=32 Score=27.88 Aligned_cols=66 Identities=18% Similarity=0.166 Sum_probs=40.6
Q ss_pred EEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+++++|+..+ .++..+++.|.+|.+..-.-... . ....++++...+..|.+++++.+. ++.+|+-.
T Consensus 7 ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~-~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi~~ 74 (227)
T 3dhn_A 7 IVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKI-----K-IENEHLKVKKADVSSLDEVCEVCK-GADAVISA 74 (227)
T ss_dssp EEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGC-----C-CCCTTEEEECCCTTCHHHHHHHHT-TCSEEEEC
T ss_pred EEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccc-----h-hccCceEEEEecCCCHHHHHHHhc-CCCEEEEe
Confidence 4555555444 56667888888887554321111 1 112567777777779999999887 46666654
No 242
>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D
Probab=64.76 E-value=20 Score=30.38 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=52.2
Q ss_pred EEeCcHHHHH--HHHHHhcCC--CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC
Q 016612 74 LCFTSGMAAL--AAVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~--g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
+++++|+..+ +++..+++. |.+|.+..-.-.... . ....+++++..+..|.+.+.+++. +...|+-....
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~-l~~~~~~~~~~D~~d~~~l~~~~~-~~d~vi~~a~~ 76 (287)
T 2jl1_A 3 IAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKAS----T-LADQGVEVRHGDYNQPESLQKAFA-GVSKLLFISGP 76 (287)
T ss_dssp EEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTH----H-HHHTTCEEEECCTTCHHHHHHHTT-TCSEEEECCCC
T ss_pred EEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHh----H-HhhcCCeEEEeccCCHHHHHHHHh-cCCEEEEcCCC
Confidence 5666666444 455667776 766654321111111 1 112467888888889999998886 46666654332
Q ss_pred CCCc--ccccHHHHHHHHHHcCC
Q 016612 150 NPRQ--QICDIRKIAEMAHAHGA 170 (386)
Q Consensus 150 nptG--~~~~l~~i~~la~~~~~ 170 (386)
++.. .+.-...+.+.|++.++
T Consensus 77 ~~~~~~n~~~~~~l~~a~~~~~~ 99 (287)
T 2jl1_A 77 HYDNTLLIVQHANVVKAARDAGV 99 (287)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTC
T ss_pred CcCchHHHHHHHHHHHHHHHcCC
Confidence 2211 12234678888888775
No 243
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=63.06 E-value=43 Score=28.68 Aligned_cols=95 Identities=13% Similarity=0.073 Sum_probs=54.9
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEEe-cCCCCC---cHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeC
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIVA-GDDLYG---GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vlv-~~~~~~---~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~ 147 (386)
+++++++ -+-+++..+++.|..|.+ .+..-. .....+. .....+++++..+..|.+.+.++++ +..+|+...
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~-~~~~~~~~~~~~D~~d~~~l~~~~~-~~d~vi~~a 84 (313)
T 1qyd_A 7 VLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLL-YFKQLGAKLIEASLDDHQRLVDALK-QVDVVISAL 84 (313)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHH-HHHTTTCEEECCCSSCHHHHHHHHT-TCSEEEECC
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHH-HHHhCCeEEEeCCCCCHHHHHHHHh-CCCEEEECC
Confidence 4455544 444556666777776653 333221 1111111 1234678888888889999999887 466666543
Q ss_pred C-CCCCcccccHHHHHHHHHHcC-C
Q 016612 148 P-TNPRQQICDIRKIAEMAHAHG-A 170 (386)
Q Consensus 148 ~-~nptG~~~~l~~i~~la~~~~-~ 170 (386)
. ..+...+.....+.+.|++.| +
T Consensus 85 ~~~~~~~~~~~~~~l~~aa~~~g~v 109 (313)
T 1qyd_A 85 AGGVLSHHILEQLKLVEAIKEAGNI 109 (313)
T ss_dssp CCSSSSTTTTTHHHHHHHHHHSCCC
T ss_pred ccccchhhHHHHHHHHHHHHhcCCC
Confidence 3 221113344678999999987 5
No 244
>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*
Probab=62.37 E-value=18 Score=30.68 Aligned_cols=91 Identities=20% Similarity=0.220 Sum_probs=49.8
Q ss_pred EEeCcHHHHH--HHHHHhcCC--CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC
Q 016612 74 LCFTSGMAAL--AAVTHLLGT--GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~--g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
+++++++..+ +++..+++. |.+|.+..-.-.... . ....+++++..+..|.+++.+++. +...|+-....
T Consensus 2 ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~----~-~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vi~~a~~ 75 (286)
T 2zcu_A 2 IAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQ----A-LAAQGITVRQADYGDEAALTSALQ-GVEKLLLISSS 75 (286)
T ss_dssp EEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCH----H-HHHTTCEEEECCTTCHHHHHHHTT-TCSEEEECC--
T ss_pred EEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhh----h-hhcCCCeEEEcCCCCHHHHHHHHh-CCCEEEEeCCC
Confidence 4455555444 456667776 776654321111111 1 112467788888889999998886 45666654332
Q ss_pred CCCcccccHHHHHHHHHHcCC
Q 016612 150 NPRQQICDIRKIAEMAHAHGA 170 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~~ 170 (386)
.+...+.-.+.+.+.|++.++
T Consensus 76 ~~~~~~~~~~~l~~a~~~~~~ 96 (286)
T 2zcu_A 76 EVGQRAPQHRNVINAAKAAGV 96 (286)
T ss_dssp ------CHHHHHHHHHHHHTC
T ss_pred CchHHHHHHHHHHHHHHHcCC
Confidence 222223345778888888775
No 245
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=59.62 E-value=20 Score=33.12 Aligned_cols=92 Identities=14% Similarity=0.084 Sum_probs=64.9
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC--CCHHHHHhhhCCC-ceEEEEeCCCCCCccccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICD 157 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~ 157 (386)
+++..+..++.+=+.+.+.+|....-...|..+.+...+++.--+. .++.++.+.+..+ ..+|.+. + |..|.+.+
T Consensus 277 eai~~~~~~l~~y~i~~iEdPl~~dD~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ik-v-~qiGGite 354 (436)
T 2al1_A 277 QLADLYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALLLK-V-NQIGTLSE 354 (436)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEEEC-H-HHHCCHHH
T ss_pred HHHHHHHHHHHhCCcEEEECCCCCcCHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEEec-h-hhcCCHHH
Confidence 4444445555555678899997766566666777677777765554 3789999888754 4455543 2 33688999
Q ss_pred HHHHHHHHHHcCCEEEE
Q 016612 158 IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 158 l~~i~~la~~~~~~li~ 174 (386)
..+++++|+++|+.+++
T Consensus 355 a~~ia~lA~~~g~~~~~ 371 (436)
T 2al1_A 355 SIKAAQDSFAAGWGVMV 371 (436)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 99999999999997765
No 246
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=59.15 E-value=35 Score=27.97 Aligned_cols=90 Identities=6% Similarity=-0.022 Sum_probs=51.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~ 148 (386)
..+++++|+..+ .++..+++.| ..|++..-.-... ......+++++..+..|.+++++.++ +..+|+.+..
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~-----~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vv~~a~ 97 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKI-----HKPYPTNSQIIMGDVLNHAALKQAMQ-GQDIVYANLT 97 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGS-----CSSCCTTEEEEECCTTCHHHHHHHHT-TCSEEEEECC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhh-----cccccCCcEEEEecCCCHHHHHHHhc-CCCEEEEcCC
Confidence 346666666555 4566688888 4665432111110 11223467777788889999999887 4566654432
Q ss_pred CCCCcccccHHHHHHHHHHcC
Q 016612 149 TNPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 149 ~nptG~~~~l~~i~~la~~~~ 169 (386)
. .......+.+.+.+++.+
T Consensus 98 ~--~~~~~~~~~~~~~~~~~~ 116 (236)
T 3qvo_A 98 G--EDLDIQANSVIAAMKACD 116 (236)
T ss_dssp S--TTHHHHHHHHHHHHHHTT
T ss_pred C--CchhHHHHHHHHHHHHcC
Confidence 1 111123566777777654
No 247
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=58.69 E-value=20 Score=30.55 Aligned_cols=91 Identities=12% Similarity=0.131 Sum_probs=51.8
Q ss_pred EEeCcHHHHH--HHHHHhcCC-CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC-
Q 016612 74 LCFTSGMAAL--AAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT- 149 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~-g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~- 149 (386)
+++++++..+ .++..+.+. |..|.+..-.-... ......+++++..+..|.+.+.++++ +...|+.....
T Consensus 3 ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~-----~~~~~~~v~~~~~D~~d~~~l~~~~~-~~d~vi~~a~~~ 76 (289)
T 3e48_A 3 IMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKV-----PDDWRGKVSVRQLDYFNQESMVEAFK-GMDTVVFIPSII 76 (289)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGS-----CGGGBTTBEEEECCTTCHHHHHHHTT-TCSEEEECCCCC
T ss_pred EEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHH-----HHhhhCCCEEEEcCCCCHHHHHHHHh-CCCEEEEeCCCC
Confidence 4555555333 445555554 66665322111111 11234678888889889999999887 45666654322
Q ss_pred CCCc-ccccHHHHHHHHHHcCC
Q 016612 150 NPRQ-QICDIRKIAEMAHAHGA 170 (386)
Q Consensus 150 nptG-~~~~l~~i~~la~~~~~ 170 (386)
++.. .+...+.+.+.|++.++
T Consensus 77 ~~~~~~~~~~~~l~~aa~~~gv 98 (289)
T 3e48_A 77 HPSFKRIPEVENLVYAAKQSGV 98 (289)
T ss_dssp CSHHHHHHHHHHHHHHHHHTTC
T ss_pred ccchhhHHHHHHHHHHHHHcCC
Confidence 2111 11235678889988875
No 248
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=57.63 E-value=25 Score=32.29 Aligned_cols=92 Identities=13% Similarity=0.054 Sum_probs=64.3
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC-cEEEEeCC--CCHHHHHhhhCC-CceEEEEeCCCCCCcccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQIC 156 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g-~~~~~v~~--~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~ 156 (386)
+.+.....++++=+.+.+.+|....-...|..+.+..+ +.++--+. .++..+.+.+.. ...++.+.. |-.|.+.
T Consensus 283 elid~y~~lle~ypI~~IEDPl~~dD~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~IlIKv--nqiGGIT 360 (441)
T 3qtp_A 283 GLIAEYVDYGKHYPIASIEDPFAEDDWAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSVLIKV--NQIGTLT 360 (441)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECG--GGTCCHH
T ss_pred HHHHHHHHHhhhcceeeecCCCChHHHHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEEEecc--cccccHH
Confidence 44445555666555778999977665556667766776 66655553 378899888863 445555443 2368889
Q ss_pred cHHHHHHHHHHcCCEEEE
Q 016612 157 DIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 157 ~l~~i~~la~~~~~~li~ 174 (386)
+..+++++|+++|+.+++
T Consensus 361 Ealkaa~lA~~~G~~vmv 378 (441)
T 3qtp_A 361 ETFKTIKMAQEKGWGVMA 378 (441)
T ss_dssp HHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCeEEE
Confidence 999999999999998776
No 249
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=57.48 E-value=23 Score=29.01 Aligned_cols=77 Identities=12% Similarity=0.145 Sum_probs=43.5
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHHHHhhhC------CCceE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
.+++++|+.++ ..+..+++.|..|++..-...........+.+..+. .+...+..|.+++++.++ .+...
T Consensus 4 ~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 83 (235)
T 3l77_A 4 VAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDVDV 83 (235)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSCSE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCCCE
Confidence 46667777666 455667888988876544322222222222222333 444456668888888776 25677
Q ss_pred EEEeCCC
Q 016612 143 VWVESPT 149 (386)
Q Consensus 143 v~~~~~~ 149 (386)
++-+...
T Consensus 84 li~~Ag~ 90 (235)
T 3l77_A 84 VVANAGL 90 (235)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 7655433
No 250
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=57.19 E-value=40 Score=28.47 Aligned_cols=75 Identities=13% Similarity=0.132 Sum_probs=41.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCCcEE--EEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g~~~--~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+.+.|..|++. ...-...... ....+..+.++ ...+..|.+++++.++ .+.
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 110 (271)
T 3v2g_A 32 KTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAV-VSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGGL 110 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHH-HHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 567777777776 3556688889888764 2221111111 12222334444 4445558777776654 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 111 D~lvnnA 117 (271)
T 3v2g_A 111 DILVNSA 117 (271)
T ss_dssp CEEEECC
T ss_pred cEEEECC
Confidence 6666543
No 251
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=56.12 E-value=73 Score=25.49 Aligned_cols=88 Identities=14% Similarity=0.095 Sum_probs=51.8
Q ss_pred EEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCC-HHHHHhhhCCCceEEEEeCCCC
Q 016612 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCD-LDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d-~~~l~~~~~~~~~~v~~~~~~n 150 (386)
+++++|+..+ .++..+++.|..|++..-.-. ......+++++..+..| .+++.+.+. +..+|+-+....
T Consensus 3 ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~-------~~~~~~~~~~~~~D~~d~~~~~~~~~~-~~d~vi~~ag~~ 74 (219)
T 3dqp_A 3 IFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVE-------QVPQYNNVKAVHFDVDWTPEEMAKQLH-GMDAIINVSGSG 74 (219)
T ss_dssp EEEESTTSHHHHHHHHHHTTSSCEEEEEESSGG-------GSCCCTTEEEEECCTTSCHHHHHTTTT-TCSEEEECCCCT
T ss_pred EEEECCCCHHHHHHHHHHHHCCCEEEEEECCcc-------chhhcCCceEEEecccCCHHHHHHHHc-CCCEEEECCcCC
Confidence 4555555444 566678888888775432211 12222567888888888 999998886 567776553322
Q ss_pred CCccc----ccHHHHHHHHHHcC
Q 016612 151 PRQQI----CDIRKIAEMAHAHG 169 (386)
Q Consensus 151 ptG~~----~~l~~i~~la~~~~ 169 (386)
..... .....+.+.|++.+
T Consensus 75 ~~~~~~~n~~~~~~l~~a~~~~~ 97 (219)
T 3dqp_A 75 GKSLLKVDLYGAVKLMQAAEKAE 97 (219)
T ss_dssp TSSCCCCCCHHHHHHHHHHHHTT
T ss_pred CCCcEeEeHHHHHHHHHHHHHhC
Confidence 21111 12456777776654
No 252
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=54.98 E-value=25 Score=26.09 Aligned_cols=89 Identities=15% Similarity=0.039 Sum_probs=53.2
Q ss_pred CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 71 ~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
...++++.|.-+..++..+.+.|..|++.+..-... ..+...+..+...+..+.+.+++.--.+.+++++..++.
T Consensus 7 ~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~-----~~~~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (141)
T 3llv_A 7 YEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKI-----ELLEDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDD 81 (141)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH-----HHHHHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCH
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHH-----HHHHHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCH
Confidence 357788888766666666666677777655432111 222345778878888888888876335677777665521
Q ss_pred CCcccccHHHHHHHHHHcC
Q 016612 151 PRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~ 169 (386)
..-..+...+++.+
T Consensus 82 -----~~n~~~~~~a~~~~ 95 (141)
T 3llv_A 82 -----EFNLKILKALRSVS 95 (141)
T ss_dssp -----HHHHHHHHHHHHHC
T ss_pred -----HHHHHHHHHHHHhC
Confidence 11234555666654
No 253
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=52.98 E-value=34 Score=31.69 Aligned_cols=93 Identities=12% Similarity=0.048 Sum_probs=58.4
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
.++++++|..|...+..+++.|..|.+-+|...... .......++++..-.. +.+++. +..+|+. .+.++
T Consensus 14 ~vlVvGgG~va~~k~~~L~~~ga~V~vi~~~~~~~~---~~l~~~~~i~~~~~~~-~~~~l~-----~~~lVi~-at~~~ 83 (457)
T 1pjq_A 14 DCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQF---TVWANEGMLTLVEGPF-DETLLD-----SCWLAIA-ATDDD 83 (457)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHH---HHHHTTTSCEEEESSC-CGGGGT-----TCSEEEE-CCSCH
T ss_pred EEEEECCCHHHHHHHHHHHhCcCEEEEEcCCCCHHH---HHHHhcCCEEEEECCC-CccccC-----CccEEEE-cCCCH
Confidence 578899999999888888888988887777654332 2333334555544332 333332 3345544 44332
Q ss_pred CcccccHHHHHHHHHHcCCEE-EEeCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALL-LVDNSI 178 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~l-i~D~a~ 178 (386)
..-..+.+.|+++++++ ++|+.-
T Consensus 84 ----~~n~~i~~~a~~~~i~vn~~d~~e 107 (457)
T 1pjq_A 84 ----TVNQRVSDAAESRRIFCNVVDAPK 107 (457)
T ss_dssp ----HHHHHHHHHHHHTTCEEEETTCTT
T ss_pred ----HHHHHHHHHHHHcCCEEEECCCcc
Confidence 22367999999999986 577763
No 254
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=52.95 E-value=25 Score=30.92 Aligned_cols=98 Identities=8% Similarity=0.046 Sum_probs=57.4
Q ss_pred eEEeCcHH--HHHHHHHHhcCCCCEEE-ecCCC--CCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEe
Q 016612 73 ALCFTSGM--AALAAVTHLLGTGEEIV-AGDDL--YGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (386)
Q Consensus 73 ~i~~~~gt--~al~~~~~~~~~g~~Vl-v~~~~--~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~ 146 (386)
.|++++++ -+-.++..+++.|..|. +.+.. .......+ ......+++++..+..|.+++.+++.. +..+|+-.
T Consensus 12 ~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~-~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~ 90 (346)
T 3i6i_A 12 RVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIF-KALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST 90 (346)
T ss_dssp CEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHH-HHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence 35555554 34455566666676655 33322 11111111 123356889999999999999988862 56666654
Q ss_pred CCCCCCcccccHHHHHHHHHHcC-CEEEE
Q 016612 147 SPTNPRQQICDIRKIAEMAHAHG-ALLLV 174 (386)
Q Consensus 147 ~~~nptG~~~~l~~i~~la~~~~-~~li~ 174 (386)
... ..+.....|.+.|++.+ +..++
T Consensus 91 a~~---~n~~~~~~l~~aa~~~g~v~~~v 116 (346)
T 3i6i_A 91 VGG---ESILDQIALVKAMKAVGTIKRFL 116 (346)
T ss_dssp CCG---GGGGGHHHHHHHHHHHCCCSEEE
T ss_pred Cch---hhHHHHHHHHHHHHHcCCceEEe
Confidence 332 12334578999999988 64444
No 255
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=52.45 E-value=23 Score=26.42 Aligned_cols=73 Identities=16% Similarity=0.060 Sum_probs=47.1
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
..++++.|.-+..++..+...|..|++-+..-... ..++..|..+..-+..+.+.++++--++.+++++..++
T Consensus 9 ~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~-----~~~~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 81 (140)
T 3fwz_A 9 HALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRV-----DELRERGVRAVLGNAANEEIMQLAHLECAKWLILTIPN 81 (140)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHH-----HHHHHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSC
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHH-----HHHHHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCC
Confidence 57888888877666666656676676655443211 22334688888888888888876533456777766554
No 256
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=51.99 E-value=56 Score=26.87 Aligned_cols=77 Identities=10% Similarity=0.094 Sum_probs=43.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+++.|.+|++..-.-.........+.....+.+...+..|.+++++.++ .+...+
T Consensus 7 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 86 (251)
T 1zk4_A 7 KVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVSTL 86 (251)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred cEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 457778777666 455667788888776433211111111122112346666677778887776664 256677
Q ss_pred EEeCC
Q 016612 144 WVESP 148 (386)
Q Consensus 144 ~~~~~ 148 (386)
+-+..
T Consensus 87 i~~Ag 91 (251)
T 1zk4_A 87 VNNAG 91 (251)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65543
No 257
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=51.48 E-value=63 Score=28.49 Aligned_cols=92 Identities=11% Similarity=0.154 Sum_probs=51.0
Q ss_pred EEeCcHHHH--HHHHHHhcCCCCEEEe-cCCCCCcHHHHHhhhcccCCcEEEEeC-CCCHHHHHhhhCCCceEEEEeCCC
Q 016612 74 LCFTSGMAA--LAAVTHLLGTGEEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVN-TCDLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 74 i~~~~gt~a--l~~~~~~~~~g~~Vlv-~~~~~~~~~~~~~~~~~~~g~~~~~v~-~~d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
+++++++.. -+++..+++.|.+|.+ .+..-.... .......+++++..+ ..|.+++.+++. ....|+.+...
T Consensus 8 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~---~~l~~~~~v~~v~~D~l~d~~~l~~~~~-~~d~Vi~~a~~ 83 (352)
T 1xgk_A 8 IAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIA---EELQAIPNVTLFQGPLLNNVPLMDTLFE-GAHLAFINTTS 83 (352)
T ss_dssp EEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHH---HHHHTSTTEEEEESCCTTCHHHHHHHHT-TCSEEEECCCS
T ss_pred EEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhH---HHHhhcCCcEEEECCccCCHHHHHHHHh-cCCEEEEcCCC
Confidence 555555533 3455566677777664 322211111 122223467787888 889999998886 45666644322
Q ss_pred CCCcccccHHHHHHHHHHcC
Q 016612 150 NPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~ 169 (386)
........-+.+.+.|++.+
T Consensus 84 ~~~~~~~~~~~l~~aa~~~g 103 (352)
T 1xgk_A 84 QAGDEIAIGKDLADAAKRAG 103 (352)
T ss_dssp TTSCHHHHHHHHHHHHHHHS
T ss_pred CCcHHHHHHHHHHHHHHHcC
Confidence 21111112377888888887
No 258
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=50.78 E-value=29 Score=31.97 Aligned_cols=92 Identities=11% Similarity=0.098 Sum_probs=64.6
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC--CCHHHHHhhhCCC-ceEEEEeCCCCCCccccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICD 157 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~ 157 (386)
+++..+..++.+=+.+.+.+|....-...|..+.+...+++.--+. .++.++.+.+..+ ..+|.+.. |-.|.+.+
T Consensus 274 e~~~~~~~ll~~y~i~~IEdPl~~dD~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~iKv--~qiGGite 351 (439)
T 2akz_A 274 QLGALYQDFVRDYPVVSIEDPFDQDDWAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLLLKV--NQIGSVTE 351 (439)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH--HHHCCHHH
T ss_pred HHHHHHHHHHHhCCCcEEECCCCcccHHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEEech--hhcCCHHH
Confidence 3344444455544578899997766555666666667778776554 4889999888754 45555433 33688899
Q ss_pred HHHHHHHHHHcCCEEEE
Q 016612 158 IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 158 l~~i~~la~~~~~~li~ 174 (386)
..+++++|+++|+.+++
T Consensus 352 a~~ia~lA~~~g~~~~~ 368 (439)
T 2akz_A 352 AIQACKLAQENGWGVMV 368 (439)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCeEEe
Confidence 99999999999997765
No 259
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=49.94 E-value=48 Score=27.87 Aligned_cols=77 Identities=10% Similarity=0.086 Sum_probs=42.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|.+|++..-.-......+....+..+ +.+...+..|.+++++.++ .+..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 109 (271)
T 4iin_A 30 KNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGGLS 109 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 467778887776 45566788898887543321111112222233334 3444455557777766654 3566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
.++-+..
T Consensus 110 ~li~nAg 116 (271)
T 4iin_A 110 YLVNNAG 116 (271)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665533
No 260
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=49.50 E-value=35 Score=25.68 Aligned_cols=21 Identities=14% Similarity=0.316 Sum_probs=18.3
Q ss_pred HHHHHHHHHcCCEEEEeCCCC
Q 016612 159 RKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 159 ~~i~~la~~~~~~li~D~a~~ 179 (386)
+++.++|+++|+.++-+.+.+
T Consensus 107 ~~~~~~a~~~Gir~vgpnc~g 127 (140)
T 1iuk_A 107 PEFEKALKEAGIPVVADRCLM 127 (140)
T ss_dssp HHHHHHHHHTTCCEEESCCHH
T ss_pred HHHHHHHHHcCCEEEcCCccc
Confidence 889999999999999887743
No 261
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=48.35 E-value=1.2e+02 Score=25.94 Aligned_cols=77 Identities=14% Similarity=0.158 Sum_probs=44.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc--CCcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-.........+... ..+.....+..|.+++++.++ .+..
T Consensus 42 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 121 (293)
T 3rih_A 42 RSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGALD 121 (293)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 567788888776 355667888988876544333333222222222 134455556668777776654 3566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 122 ~lvnnAg 128 (293)
T 3rih_A 122 VVCANAG 128 (293)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665533
No 262
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=48.25 E-value=47 Score=28.07 Aligned_cols=76 Identities=11% Similarity=0.091 Sum_probs=42.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.........+....+ +.....|..|.+++++.++ .+..
T Consensus 28 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 107 (277)
T 4fc7_A 28 KVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFGRID 107 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777666 45566888898887654332222222222222223 3444556668777776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 108 ~lv~nA 113 (277)
T 4fc7_A 108 ILINCA 113 (277)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 263
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=47.69 E-value=45 Score=27.59 Aligned_cols=76 Identities=14% Similarity=0.118 Sum_probs=40.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE--EEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+++.|.+|++....-...........+..+.+ ....+..|.+++++.++ .+..
T Consensus 5 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 84 (246)
T 3osu_A 5 KSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGSLD 84 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 456777777776 4556688889888764321111111111222233434 44455557777776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
.++-+.
T Consensus 85 ~lv~nA 90 (246)
T 3osu_A 85 VLVNNA 90 (246)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 264
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=47.35 E-value=88 Score=23.51 Aligned_cols=88 Identities=9% Similarity=-0.012 Sum_probs=50.0
Q ss_pred CCceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc-cCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCC
Q 016612 70 ADRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 70 ~~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~ 148 (386)
....++++.|.-+..++..+...|..|++.+..-... ..++ ..|..+...+..+.+.+.+.--.+..+|++..+
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~-----~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~ 93 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAF-----HRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTN 93 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGG-----GGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH-----HHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeC
Confidence 3467888888866665555555676776554432211 2233 567766555656777776541134667776654
Q ss_pred CCCCcccccHHHHHHHHHH
Q 016612 149 TNPRQQICDIRKIAEMAHA 167 (386)
Q Consensus 149 ~nptG~~~~l~~i~~la~~ 167 (386)
+. .....+..++++
T Consensus 94 ~~-----~~~~~~~~~~~~ 107 (155)
T 2g1u_A 94 DD-----STNFFISMNARY 107 (155)
T ss_dssp CH-----HHHHHHHHHHHH
T ss_pred Cc-----HHHHHHHHHHHH
Confidence 31 123455666666
No 265
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=47.07 E-value=86 Score=23.34 Aligned_cols=38 Identities=16% Similarity=0.261 Sum_probs=25.4
Q ss_pred hhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 134 SAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 134 ~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
+.+...++.+++.... .-+++.+.|+++|+.++-+.+.
T Consensus 88 ~~~~~g~~~i~~~~~~-------~~~~l~~~a~~~Gi~~igpnc~ 125 (138)
T 1y81_A 88 EAVEAGFKKLWFQPGA-------ESEEIRRFLEKAGVEYSFGRCI 125 (138)
T ss_dssp HHHHTTCCEEEECTTS-------CCHHHHHHHHHHTCEEECSCCH
T ss_pred HHHHcCCCEEEEcCcc-------HHHHHHHHHHHCCCEEEcCCcc
Confidence 3344456676654321 1488999999999998766664
No 266
>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*
Probab=46.99 E-value=57 Score=28.03 Aligned_cols=95 Identities=17% Similarity=0.115 Sum_probs=55.2
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEE-ecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIV-AGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vl-v~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
+++++++ -+-+++..+++.|..|. +.+..-... ..+.. ....+++++..+..|.+++.++++ ....|+......
T Consensus 14 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~-~~~~~-l~~~~v~~v~~Dl~d~~~l~~a~~-~~d~vi~~a~~~ 90 (318)
T 2r6j_A 14 ILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKT-TLLDE-FQSLGAIIVKGELDEHEKLVELMK-KVDVVISALAFP 90 (318)
T ss_dssp EEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCH-HHHHH-HHHTTCEEEECCTTCHHHHHHHHT-TCSEEEECCCGG
T ss_pred EEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchh-hHHHH-hhcCCCEEEEecCCCHHHHHHHHc-CCCEEEECCchh
Confidence 5555544 44456666777776664 333221111 11111 234678888889889999999887 456665433211
Q ss_pred CCcccccHHHHHHHHHHcC-CEEEE
Q 016612 151 PRQQICDIRKIAEMAHAHG-ALLLV 174 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~-~~li~ 174 (386)
.+...+.+.+.|++.+ +--++
T Consensus 91 ---~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 91 ---QILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp ---GSTTHHHHHHHHHHHCCCCEEE
T ss_pred ---hhHHHHHHHHHHHhcCCCCEEE
Confidence 1334678889998887 54333
No 267
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=46.93 E-value=58 Score=27.42 Aligned_cols=77 Identities=12% Similarity=0.126 Sum_probs=41.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-...........+..+. .....|..|.+++++.++ .+..
T Consensus 29 k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~id 108 (269)
T 4dmm_A 29 RIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGRLD 108 (269)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 567788887776 455668888988876432111111111122223333 444455567777776654 2566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 109 ~lv~nAg 115 (269)
T 4dmm_A 109 VLVNNAG 115 (269)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665533
No 268
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=46.89 E-value=54 Score=27.55 Aligned_cols=75 Identities=11% Similarity=0.072 Sum_probs=41.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE--EEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-..........++..+.+ ....+..|.+++++.++ .+..
T Consensus 19 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 98 (270)
T 3is3_A 19 KVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGHLD 98 (270)
T ss_dssp CEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887776 3556688889888763221111111111222233444 44455558777776654 2566
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
+++-+
T Consensus 99 ~lvnn 103 (270)
T 3is3_A 99 IAVSN 103 (270)
T ss_dssp EEECC
T ss_pred EEEEC
Confidence 66544
No 269
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=46.56 E-value=90 Score=23.39 Aligned_cols=40 Identities=23% Similarity=0.405 Sum_probs=26.9
Q ss_pred HHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
+++++...++.+++.. |. .-+++.++|+++|+.++-+.+.
T Consensus 94 v~~~~~~gi~~i~~~~-----g~--~~~~l~~~a~~~Gi~vvGpnc~ 133 (144)
T 2d59_A 94 VEQAIKKGAKVVWFQY-----NT--YNREASKKADEAGLIIVANRCM 133 (144)
T ss_dssp HHHHHHHTCSEEEECT-----TC--CCHHHHHHHHHTTCEEEESCCH
T ss_pred HHHHHHcCCCEEEECC-----Cc--hHHHHHHHHHHcCCEEEcCCch
Confidence 4444444566776442 22 2588999999999998877764
No 270
>3mio_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin, ribulose-5-phosphate, FAD, FMN; 1.80A {Mycobacterium tuberculosis} SCOP: d.115.1.0 PDB: 3mgz_A 3mk5_A
Probab=46.19 E-value=46 Score=27.00 Aligned_cols=43 Identities=16% Similarity=0.179 Sum_probs=32.4
Q ss_pred HHhhhCCCceEEEEeCC-CCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 132 VASAIGPWTKLVWVESP-TNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~-~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.+...-.+..++.+-. -|..|....+.++.++|++||+.++.
T Consensus 151 LarlAGl~Pa~vicEiv~~~~dG~mar~~~l~~fA~~h~l~~it 194 (206)
T 3mio_A 151 LARMAGLQPAGAICEIVSQKDEGSMAHTDELRVFADEHGLALIT 194 (206)
T ss_dssp HHHHTTSCSBEEEEEBBCSSSTTSBCCHHHHHHHHHHHTCEEEE
T ss_pred HHHHcCCCceEEEEEEeeeCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 33433445677776662 55789999999999999999998874
No 271
>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}
Probab=45.57 E-value=75 Score=27.13 Aligned_cols=87 Identities=10% Similarity=0.072 Sum_probs=51.2
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
+++++|+ -+-+++..+++.|..|.+..-. .... . . .+++++..+.. .+++.++++ ++.+|+-......
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~-~~~~----~-~--~~~~~~~~Dl~-~~~~~~~~~-~~d~Vih~a~~~~ 74 (311)
T 3m2p_A 5 IAVTGGTGFLGQYVVESIKNDGNTPIILTRS-IGNK----A-I--NDYEYRVSDYT-LEDLINQLN-DVDAVVHLAATRG 74 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEESC-CC------------CCEEEECCCC-HHHHHHHTT-TCSEEEECCCCCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCCEEEEEeCC-CCcc----c-C--CceEEEEcccc-HHHHHHhhc-CCCEEEEccccCC
Confidence 4555554 4445666677888887754433 3322 1 1 27888888888 888988887 6667765432221
Q ss_pred Ccc----c----ccHHHHHHHHHHcCC
Q 016612 152 RQQ----I----CDIRKIAEMAHAHGA 170 (386)
Q Consensus 152 tG~----~----~~l~~i~~la~~~~~ 170 (386)
... . .....+.+.|++.++
T Consensus 75 ~~~~~~~~~~n~~~~~~ll~a~~~~~~ 101 (311)
T 3m2p_A 75 SQGKISEFHDNEILTQNLYDACYENNI 101 (311)
T ss_dssp SSSCGGGTHHHHHHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHHHHHHHHHHHHHcCC
Confidence 111 1 124678888888775
No 272
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=45.27 E-value=94 Score=25.87 Aligned_cols=68 Identities=15% Similarity=0.199 Sum_probs=40.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC--CCceEEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVW 144 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~--~~~~~v~ 144 (386)
+.+++|+|+.+| .....+.+.|-+|++.+-.-... .......+.....+..|.+++++.++ .+...++
T Consensus 12 K~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~-----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLV 83 (242)
T 4b79_A 12 QQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGV-----HAPRHPRIRREELDITDSQRLQRLFEALPRLDVLV 83 (242)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTST-----TSCCCTTEEEEECCTTCHHHHHHHHHHCSCCSEEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH-----hhhhcCCeEEEEecCCCHHHHHHHHHhcCCCCEEE
Confidence 466777777777 35566888998888755332211 11222334455556668888877765 3555554
No 273
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=45.04 E-value=1.2e+02 Score=25.30 Aligned_cols=80 Identities=10% Similarity=0.098 Sum_probs=45.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhc-ccCCcEEEEeCCCCHHHHHhhhC------CCceE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
+.+++|+|+.+| .....+.+.|-+|++.+-.- ... .... +.........+..|.+++++.++ .+..+
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~---~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDi 78 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDE---KRS-ADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCH---HHH-HHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCH---HHH-HHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 356778888777 35566888999988755432 111 2222 22234444556667777776654 35666
Q ss_pred EEEeCCCCCCccc
Q 016612 143 VWVESPTNPRQQI 155 (386)
Q Consensus 143 v~~~~~~nptG~~ 155 (386)
++-+...++.+..
T Consensus 79 LVNNAG~~~~~~~ 91 (247)
T 3ged_A 79 LVNNACRGSKGIL 91 (247)
T ss_dssp EEECCCCCCCCGG
T ss_pred EEECCCCCCCCCc
Confidence 6544434444443
No 274
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=44.92 E-value=46 Score=28.93 Aligned_cols=98 Identities=11% Similarity=0.172 Sum_probs=54.0
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhc--ccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeC
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT--PKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVES 147 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~--~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~ 147 (386)
.+++++|+..+ +++..+++.|..|++..-.-........... ...++++...+..|.+++++.++. +...|+-+.
T Consensus 7 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vih~A 86 (341)
T 3enk_A 7 TILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAIHFA 86 (341)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEEECC
T ss_pred EEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEEECc
Confidence 46667666555 4666678889888765432222111111111 123566767777799999988863 566666443
Q ss_pred CCCCCcccc------------cHHHHHHHHHHcCC
Q 016612 148 PTNPRQQIC------------DIRKIAEMAHAHGA 170 (386)
Q Consensus 148 ~~nptG~~~------------~l~~i~~la~~~~~ 170 (386)
.....+... -...+.+.|++.+.
T Consensus 87 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 121 (341)
T 3enk_A 87 ALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAV 121 (341)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccccCccccChHHHHHHHHHHHHHHHHHHHhCCC
Confidence 322222111 13456777777764
No 275
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=43.80 E-value=90 Score=26.07 Aligned_cols=76 Identities=13% Similarity=0.120 Sum_probs=42.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|..|++..-.-.............. .+.+...+..|.+++++.+. .+..
T Consensus 26 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~id 105 (269)
T 3gk3_A 26 RVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFGKVD 105 (269)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788888777 3556688889888765322111111111112222 34555566668777776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
.++-+.
T Consensus 106 ~li~nA 111 (269)
T 3gk3_A 106 VLINNA 111 (269)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666553
No 276
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=43.55 E-value=25 Score=30.13 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=26.4
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLY 103 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~ 103 (386)
.++++++|..|...+..+++.|-.|.|-+|..
T Consensus 15 ~VLVVGgG~va~rka~~Ll~~Ga~VtViap~~ 46 (274)
T 1kyq_A 15 RILLIGGGEVGLTRLYKLMPTGCKLTLVSPDL 46 (274)
T ss_dssp EEEEEEESHHHHHHHHHHGGGTCEEEEEEEEE
T ss_pred EEEEECCcHHHHHHHHHHHhCCCEEEEEcCCC
Confidence 58888999999988888899998887766654
No 277
>1g57_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavine biosynthesis, skeletal rearrangement, antimicrobial target; 1.40A {Escherichia coli} SCOP: d.115.1.2 PDB: 1g58_A 1iez_A 3ls6_A 3lrj_A 3lqu_A 3h07_A
Probab=43.37 E-value=48 Score=27.13 Aligned_cols=42 Identities=19% Similarity=0.163 Sum_probs=31.4
Q ss_pred HHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.+...-.+..++.+-. |..|......++.++|++||+.++.
T Consensus 160 LarLAGl~Pa~vicEi~-~~dG~mar~~~l~~fA~~h~l~~it 201 (217)
T 1g57_A 160 LMTLAGFKPAGVLCELT-NDDGTMARAPECIEFANKHNMALVT 201 (217)
T ss_dssp HHHHTTSCSCEEEEEBB-CTTSSBCCHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCceEEEEEEe-CCCCCccCHHHHHHHHHHcCCCEEE
Confidence 33333345667766654 6679999999999999999998874
No 278
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=43.10 E-value=1.3e+02 Score=24.30 Aligned_cols=120 Identities=15% Similarity=0.201 Sum_probs=66.0
Q ss_pred chHHHHHHHHHhhcCCC---ceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE---EEEeCCC
Q 016612 55 PTRDALESLLAKLDKAD---RALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV---VKRVNTC 127 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~---~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~---~~~v~~~ 127 (386)
|...++-..+....+.. .++=+++|+..... +...+.++.+|+..+..-. .....+..++..|.. +..+. .
T Consensus 39 ~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~-~~~~a~~~~~~~g~~~~~i~~~~-g 116 (221)
T 3dr5_A 39 EMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESE-HQRQAKALFREAGYSPSRVRFLL-S 116 (221)
T ss_dssp HHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHH-HHHHHHHHHHHTTCCGGGEEEEC-S
T ss_pred HHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHH-HHHHHHHHHHHcCCCcCcEEEEE-c
Confidence 45556666666777765 67777777755543 3334666777877665432 222233444455543 44443 3
Q ss_pred CHHHHHhhh-CCCceEEEEeCCCCCCcccccHHHHHHHHHH---cCCEEEEeCCCCCCC
Q 016612 128 DLDEVASAI-GPWTKLVWVESPTNPRQQICDIRKIAEMAHA---HGALLLVDNSIMSPV 182 (386)
Q Consensus 128 d~~~l~~~~-~~~~~~v~~~~~~nptG~~~~l~~i~~la~~---~~~~li~D~a~~~~~ 182 (386)
|..++...+ +....+|++.... .......+.+.+ .|.++++|++...|.
T Consensus 117 da~~~l~~~~~~~fD~V~~d~~~------~~~~~~l~~~~~~LkpGG~lv~dn~~~~g~ 169 (221)
T 3dr5_A 117 RPLDVMSRLANDSYQLVFGQVSP------MDLKALVDAAWPLLRRGGALVLADALLDGT 169 (221)
T ss_dssp CHHHHGGGSCTTCEEEEEECCCT------TTHHHHHHHHHHHEEEEEEEEETTTTGGGT
T ss_pred CHHHHHHHhcCCCcCeEEEcCcH------HHHHHHHHHHHHHcCCCcEEEEeCCCCCCc
Confidence 555554444 4567888876431 122333333333 377888888865443
No 279
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=42.84 E-value=78 Score=29.21 Aligned_cols=92 Identities=13% Similarity=0.073 Sum_probs=61.1
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCC--CHHHHHhhhCC-CceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTC--DLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~--d~~~l~~~~~~-~~~~v~~~~~~nptG~~ 155 (386)
+++..+..++.+=+.+.+.+|....-...|..+.+.. .+.+.--+.. ++.++.+.+.. ...+|.+.. |-.|.+
T Consensus 293 eai~~~~~lle~y~i~~IEdPl~~dD~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv--~~iGGi 370 (449)
T 3uj2_A 293 ELVAHWKSLCERYPIVSIEDGLDEEDWEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKL--NQIGTV 370 (449)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH--HHHCSH
T ss_pred HHHHHHHHHHHhcCceEEECCCCcchHHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECc--cccCCH
Confidence 5555544555554577899997765555555655555 3454443432 68888888864 345555442 236888
Q ss_pred ccHHHHHHHHHHcCCEEEE
Q 016612 156 CDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~ 174 (386)
.+..+++++|+++|+.+++
T Consensus 371 Tea~kia~lA~~~Gi~~~v 389 (449)
T 3uj2_A 371 SETLEAIKMAHKAGYTAVV 389 (449)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEE
Confidence 9999999999999998766
No 280
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=42.78 E-value=43 Score=27.83 Aligned_cols=90 Identities=11% Similarity=0.052 Sum_probs=48.6
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHH
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
+++..+......|.+|++-.|.-..-.. ..+..+.|.++..+...+.+++.+.+ .+..+|+++=.+..++ +.+
T Consensus 35 ~lL~~~~r~~~~g~kvli~kp~~D~Ryg--~~i~sr~G~~~~a~~i~~~~di~~~~-~~~dvViIDEaQF~~~----v~e 107 (234)
T 2orv_A 35 ELMRRVRRFQIAQYKCLVIKYAKDTRYS--SSFCTHDRNTMEALPACLLRDVAQEA-LGVAVIGIDEGQFFPD----IVE 107 (234)
T ss_dssp HHHHHHHHHHTTTCCEEEEEETTCCCC-------------CEEEEESSGGGGHHHH-TTCSEEEESSGGGCTT----HHH
T ss_pred HHHHHHHHHHHCCCeEEEEeecCCccch--HHHHhhcCCeeEEEecCCHHHHHHHh-ccCCEEEEEchhhhhh----HHH
Confidence 5555666666667777654443211100 13444556655444433444454444 4578999987776553 778
Q ss_pred HHHHHHHcCCEEEEeCC
Q 016612 161 IAEMAHAHGALLLVDNS 177 (386)
Q Consensus 161 i~~la~~~~~~li~D~a 177 (386)
+.++..+.|+.||+=+-
T Consensus 108 l~~~l~~~gi~VI~~GL 124 (234)
T 2orv_A 108 FCEAMANAGKTVIVAAL 124 (234)
T ss_dssp HHHHHHHTTCEEEEECC
T ss_pred HHHHHHhCCCEEEEEec
Confidence 88888888999987443
No 281
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=42.70 E-value=69 Score=26.60 Aligned_cols=74 Identities=9% Similarity=0.120 Sum_probs=42.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.+| .++..+++.|..|++. ...- ..........+..+ +.+...+..|.+++++.++ .+.
T Consensus 8 k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 86 (264)
T 3i4f_A 8 RHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDT-TAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGKI 86 (264)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCH-HHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCCh-HHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 457788887776 4556688889888764 3221 11222223333333 4455556668887776664 256
Q ss_pred eEEEEe
Q 016612 141 KLVWVE 146 (386)
Q Consensus 141 ~~v~~~ 146 (386)
.+++-+
T Consensus 87 d~lv~~ 92 (264)
T 3i4f_A 87 DFLINN 92 (264)
T ss_dssp CEEECC
T ss_pred CEEEEC
Confidence 666544
No 282
>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}
Probab=42.62 E-value=1.2e+02 Score=26.46 Aligned_cols=101 Identities=10% Similarity=0.044 Sum_probs=53.6
Q ss_pred eEEeCcHHHHH--HHHHHhcC--CCCEEEecCCCCCcHH---HHH-----hhhcccCCcEEEEeCCCCHHHHHhhhCCCc
Q 016612 73 ALCFTSGMAAL--AAVTHLLG--TGEEIVAGDDLYGGTD---RLL-----SRVTPKTGVVVKRVNTCDLDEVASAIGPWT 140 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~--~g~~Vlv~~~~~~~~~---~~~-----~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~ 140 (386)
.+++++|+..+ +++..+++ .|..|++..-.-.... ... .......+++++..+..|.++++++...++
T Consensus 12 ~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~ 91 (362)
T 3sxp_A 12 TILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEKLHF 91 (362)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTTSCC
T ss_pred EEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhccCC
Confidence 46666666554 45666777 7888875432111000 000 011223356777778889999988734567
Q ss_pred eEEEEeCCCCCCccc----------ccHHHHHHHHHHcCCEEE
Q 016612 141 KLVWVESPTNPRQQI----------CDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 141 ~~v~~~~~~nptG~~----------~~l~~i~~la~~~~~~li 173 (386)
.+|+-.........- .....+.+.|++.++.+|
T Consensus 92 D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V 134 (362)
T 3sxp_A 92 DYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVI 134 (362)
T ss_dssp SEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEE
T ss_pred CEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 777644321111000 013467888888776533
No 283
>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}
Probab=42.09 E-value=79 Score=27.37 Aligned_cols=95 Identities=14% Similarity=0.155 Sum_probs=51.1
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCC
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPT 149 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~ 149 (386)
.+++++|+..+ +++..+++.|..|++..-.-.... .......+++++..+..|.+++.+++.. ++.+|+-+...
T Consensus 23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 99 (333)
T 2q1w_A 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRR---EHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS 99 (333)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG---GGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccch---hhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence 35566555444 456667777887765432111110 0111114667777788898888887753 46666654332
Q ss_pred CCCcc---------cccHHHHHHHHHHcCC
Q 016612 150 NPRQQ---------ICDIRKIAEMAHAHGA 170 (386)
Q Consensus 150 nptG~---------~~~l~~i~~la~~~~~ 170 (386)
...+. +.-...+.+.|.+.++
T Consensus 100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 129 (333)
T 2q1w_A 100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNV 129 (333)
T ss_dssp CSCTTCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred cCCCccCChHHHHHHHHHHHHHHHHHHhCC
Confidence 21111 1113567777877664
No 284
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=42.08 E-value=66 Score=27.04 Aligned_cols=75 Identities=11% Similarity=0.103 Sum_probs=40.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+.+.|..|++. ...- ..........+..+. .....+..|.+++++.++ .+.
T Consensus 28 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 106 (267)
T 3u5t_A 28 KVAIVTGASRGIGAAIAARLASDGFTVVINYAGKA-AAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGGV 106 (267)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCS-HHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCH-HHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 567777777666 3556677889888764 2222 111111122223333 344455568777776654 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 107 D~lvnnA 113 (267)
T 3u5t_A 107 DVLVNNA 113 (267)
T ss_dssp EEEEECC
T ss_pred CEEEECC
Confidence 6665443
No 285
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=41.91 E-value=60 Score=26.21 Aligned_cols=73 Identities=10% Similarity=0.012 Sum_probs=46.9
Q ss_pred eEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC
Q 016612 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 73 ~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
.++++.|.-+...+..+.+.|..|++-+...... ..+.+..|..+..-+..+.+.++++--.+.+++++..++
T Consensus 3 iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~----~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~ 75 (218)
T 3l4b_C 3 VIIIGGETTAYYLARSMLSRKYGVVIINKDRELC----EEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPR 75 (218)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSC
T ss_pred EEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHH----HHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCC
Confidence 5677888766666666666677776655432211 233444678888888889888887644567777765543
No 286
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=41.62 E-value=68 Score=23.26 Aligned_cols=89 Identities=11% Similarity=0.016 Sum_probs=49.4
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNP 151 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~np 151 (386)
..++++.|.-+...+..+.+.|..|.+-+..-. ....+.+..+..+...+..+.+.+.+..-.+.++|++..+..
T Consensus 6 ~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~----~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~- 80 (140)
T 1lss_A 6 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKD----ICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKE- 80 (140)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHH----HHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCH-
T ss_pred EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHH----HHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCc-
Confidence 466777777666655556666777765544221 112233334666655566677777655334677887775432
Q ss_pred CcccccHHHHHHHHHHcC
Q 016612 152 RQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~ 169 (386)
..-..+..++++.+
T Consensus 81 ----~~~~~~~~~~~~~~ 94 (140)
T 1lss_A 81 ----EVNLMSSLLAKSYG 94 (140)
T ss_dssp ----HHHHHHHHHHHHTT
T ss_pred ----hHHHHHHHHHHHcC
Confidence 11124555666554
No 287
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=41.59 E-value=86 Score=25.23 Aligned_cols=75 Identities=12% Similarity=0.141 Sum_probs=51.5
Q ss_pred CCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcC----CEEEEe
Q 016612 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG----ALLLVD 175 (386)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~----~~li~D 175 (386)
.|.--...+..+++..|.+++..... .++++.+.+. .++++|.++.... .....++++.+..++.+ +.+++=
T Consensus 100 ~H~iG~~~va~~l~~~G~~v~~LG~~vp~~~l~~~~~~~~~d~v~lS~~~~--~~~~~~~~~i~~l~~~~~~~~~~v~vG 177 (210)
T 1y80_A 100 LHDIGKNLVAMMLESGGFTVYNLGVDIEPGKFVEAVKKYQPDIVGMSALLT--TTMMNMKSTIDALIAAGLRDRVKVIVG 177 (210)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEECCSSBCHHHHHHHHHHHCCSEEEEECCSG--GGTHHHHHHHHHHHHTTCGGGCEEEEE
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEecccc--ccHHHHHHHHHHHHhcCCCCCCeEEEE
Confidence 44444445567788999999987765 6777776664 5788888876543 23456788888887754 777776
Q ss_pred CCC
Q 016612 176 NSI 178 (386)
Q Consensus 176 ~a~ 178 (386)
+..
T Consensus 178 G~~ 180 (210)
T 1y80_A 178 GAP 180 (210)
T ss_dssp STT
T ss_pred CCC
Confidence 553
No 288
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=41.54 E-value=80 Score=26.72 Aligned_cols=77 Identities=13% Similarity=0.106 Sum_probs=41.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCc-HHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-TDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~-~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-.. .......+....+.++.. .+..|.+++++.++ .+.
T Consensus 26 k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 105 (281)
T 3v2h_A 26 KTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFGGA 105 (281)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTSSC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCCCC
Confidence 456677777666 4556688889888865432211 111112222222334444 45557777776654 256
Q ss_pred eEEEEeCC
Q 016612 141 KLVWVESP 148 (386)
Q Consensus 141 ~~v~~~~~ 148 (386)
.+++-+..
T Consensus 106 D~lv~nAg 113 (281)
T 3v2h_A 106 DILVNNAG 113 (281)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 67665543
No 289
>1snn_A DHBP synthase, 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesis, isomerase; HET: 5RP; 1.55A {Methanocaldococcus jannaschii} SCOP: d.115.1.2 PDB: 1pvy_A* 1pvw_A
Probab=41.54 E-value=45 Score=27.50 Aligned_cols=42 Identities=12% Similarity=0.022 Sum_probs=31.6
Q ss_pred HHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.++..-.+..++.+-. |..|....+.++.++|++||+.++.
T Consensus 171 LarlAGl~Pa~VicEi~-~ddG~mar~~~l~~fA~~h~l~~it 212 (227)
T 1snn_A 171 LAELANLVPITTICEMM-GDDGNAMSKNETKRYAEKHNLIYLS 212 (227)
T ss_dssp HHHHTTSCSEEEEEEEB-CTTSSBCCHHHHHHHHHHHTCCEEE
T ss_pred HHHHcCCCceEEEEEEe-CCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 44444445666666554 5679999999999999999998874
No 290
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=41.18 E-value=1.1e+02 Score=27.16 Aligned_cols=82 Identities=12% Similarity=0.056 Sum_probs=51.5
Q ss_pred CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCE
Q 016612 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGAL 171 (386)
Q Consensus 94 ~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~ 171 (386)
+...+.+|..+.....+..+.+..++.+..-+. .+..++++.+.. ...++.+... ..|.+.+..+|+++|+++|+.
T Consensus 215 ~i~~iEqP~~~~~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~--~~GGit~~~~i~~~A~~~g~~ 292 (370)
T 1chr_A 215 GVELIEQPVGRENTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLC--NMGGVSATQKIAAVAEASGIA 292 (370)
T ss_dssp TEEEEECCSCTTCHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTT--TSCSHHHHHHHHHHHHHHTCE
T ss_pred CCCEEECCCCcccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECcc--ccCCHHHHHHHHHHHHHcCCe
Confidence 344566665443333333444455555554443 267777777764 3556655432 268888999999999999999
Q ss_pred EEEeCC
Q 016612 172 LLVDNS 177 (386)
Q Consensus 172 li~D~a 177 (386)
+..-..
T Consensus 293 ~~~~~~ 298 (370)
T 1chr_A 293 SYGGTM 298 (370)
T ss_dssp EEECCS
T ss_pred EEecCC
Confidence 886543
No 291
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=41.12 E-value=1e+02 Score=25.37 Aligned_cols=76 Identities=13% Similarity=0.195 Sum_probs=42.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-.... ...+..+.++.. .+..|.+++++.++ .+..
T Consensus 7 k~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 82 (247)
T 3rwb_A 7 KTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAK----AAAASIGKKARAIAADISDPGSVKALFAEIQALTGGID 82 (247)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHH----HHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 456777777666 455667888988887554322221 222222333444 44457777776654 3566
Q ss_pred EEEEeCCCCC
Q 016612 142 LVWVESPTNP 151 (386)
Q Consensus 142 ~v~~~~~~np 151 (386)
+++-+....+
T Consensus 83 ~lv~nAg~~~ 92 (247)
T 3rwb_A 83 ILVNNASIVP 92 (247)
T ss_dssp EEEECCCCCC
T ss_pred EEEECCCCCC
Confidence 7665543333
No 292
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=40.96 E-value=38 Score=31.08 Aligned_cols=92 Identities=12% Similarity=0.052 Sum_probs=61.2
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCC--CCHHHHHhhhCC-CceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~~~~-~~~~v~~~~~~nptG~~ 155 (386)
+++..+..++.+=+.+.+.+|....-...|..+.+..+ +.+.--+. .++.++.+.+.. ...+|.+.. |-.|.+
T Consensus 267 eai~~~~~ll~~y~i~~IEdPl~~dD~eg~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv--~~iGGi 344 (428)
T 3tqp_A 267 EMIDRLTEWTKKYPVISIEDGLSENDWAGWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKL--NQIGTL 344 (428)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH--HHHCCH
T ss_pred HHHHHHHHHHhhcccceEeCCCCcccHHHHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecc--cccCCH
Confidence 55555555555545778999976655555556665555 44433332 378888888864 345555443 336888
Q ss_pred ccHHHHHHHHHHcCCEEEE
Q 016612 156 CDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~ 174 (386)
.+..+++++|+++|+.+++
T Consensus 345 Tealkia~lA~~~G~~~~v 363 (428)
T 3tqp_A 345 TETLATVGLAKSNKYGVII 363 (428)
T ss_dssp HHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCeEEE
Confidence 9999999999999998766
No 293
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=40.64 E-value=87 Score=24.09 Aligned_cols=66 Identities=12% Similarity=0.083 Sum_probs=45.0
Q ss_pred CCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcC
Q 016612 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~ 169 (386)
.|.--...+...++..|.+++..... .++++.+.+. .++.+|.++.... .....++++.+..++.+
T Consensus 30 ~HdiG~~~va~~l~~~G~eVi~lG~~~p~e~lv~aa~~~~~diV~lS~~~~--~~~~~~~~~i~~L~~~g 97 (161)
T 2yxb_A 30 GHDRGAKVVARALRDAGFEVVYTGLRQTPEQVAMAAVQEDVDVIGVSILNG--AHLHLMKRLMAKLRELG 97 (161)
T ss_dssp SCCHHHHHHHHHHHHTTCEEECCCSBCCHHHHHHHHHHTTCSEEEEEESSS--CHHHHHHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHhcCCCEEEEEeech--hhHHHHHHHHHHHHhcC
Confidence 44433444567788899999887753 7777776654 6888888876543 33456778887777753
No 294
>1pq4_A Periplasmic binding protein component of AN ABC T uptake transporter; ZNUA, loop, metal-binding, metal binding protein; 1.90A {Synechocystis SP} SCOP: c.92.2.2 PDB: 2ov3_A 2ov1_A
Probab=40.62 E-value=97 Score=26.55 Aligned_cols=69 Identities=10% Similarity=0.086 Sum_probs=40.6
Q ss_pred CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC----CCHHHHHh---hhC-CCceEEEEeCCCCCCcccccHHHHHH
Q 016612 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT----CDLDEVAS---AIG-PWTKLVWVESPTNPRQQICDIRKIAE 163 (386)
Q Consensus 92 ~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~----~d~~~l~~---~~~-~~~~~v~~~~~~nptG~~~~l~~i~~ 163 (386)
++..+++..+.|. -.++.+|++...+.. .++.+|.+ .++ .++++|+.+.-.++ +-...
T Consensus 189 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~~~ 254 (291)
T 1pq4_A 189 PQRKFIVFHPSWA-------YFARDYNLVQIPIEVEGQEPSAQELKQLIDTAKENNLTMVFGETQFST-------KSSEA 254 (291)
T ss_dssp SCCEEEESSCCCH-------HHHHHTTCEEEESCBTTBCCCHHHHHHHHHHHHTTTCCEEEEETTSCC-------HHHHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCEEeecccCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHHHH
Confidence 4778888777662 345678888766542 24444443 333 56777777655443 33344
Q ss_pred HHHHcCCEEEE
Q 016612 164 MAHAHGALLLV 174 (386)
Q Consensus 164 la~~~~~~li~ 174 (386)
++++.|+.++.
T Consensus 255 ia~~~g~~v~~ 265 (291)
T 1pq4_A 255 IAAEIGAGVEL 265 (291)
T ss_dssp HHHHHTCEEEE
T ss_pred HHHHcCCeEEE
Confidence 56777766543
No 295
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=40.59 E-value=55 Score=27.44 Aligned_cols=77 Identities=10% Similarity=0.075 Sum_probs=42.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.........+.+..+ +.....|..|.+++++.++ .+..
T Consensus 21 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 100 (266)
T 4egf_A 21 KRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFGGLD 100 (266)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHTSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 567788888776 35566788898887654332222222122222123 4444555557666665543 3567
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 101 ~lv~nAg 107 (266)
T 4egf_A 101 VLVNNAG 107 (266)
T ss_dssp EEEEECC
T ss_pred EEEECCC
Confidence 7765543
No 296
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=40.43 E-value=1.5e+02 Score=27.14 Aligned_cols=95 Identities=9% Similarity=0.010 Sum_probs=63.4
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeC-C-CCHHHHHhhhCC-CceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVN-T-CDLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~-~-~d~~~l~~~~~~-~~~~v~~~~~~nptG~~ 155 (386)
+++..+..+..+=+...+.+|....-...+..+.+.. .+.+..-+ . .+..++.+.+.. ...+|.+.. +-.|.+
T Consensus 271 ~ai~~~~~L~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i~ik~--~~~GGi 348 (431)
T 2fym_A 271 EFTHFLEELTKQYPIVSIEDGLDESDWDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSILIKF--NQIGSL 348 (431)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECG--GGTCSH
T ss_pred HHHHHHHHHHHhCCceEEECCCCcccHHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEEEECc--cccCCH
Confidence 4554444444423467899997765555555555555 56666555 2 478888888864 345665543 336889
Q ss_pred ccHHHHHHHHHHcCCEEEEeCC
Q 016612 156 CDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D~a 177 (386)
.+..+++++|+++|+.+++-..
T Consensus 349 te~~~i~~~A~~~g~~~~~~h~ 370 (431)
T 2fym_A 349 TETLAAIKMAKDAGYTAVISHR 370 (431)
T ss_dssp HHHHHHHHHHHHTTCEEEEECC
T ss_pred HHHHHHHHHHHHCCCeEEEeCC
Confidence 9999999999999998876443
No 297
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=40.27 E-value=1.2e+02 Score=24.82 Aligned_cols=94 Identities=13% Similarity=-0.009 Sum_probs=46.3
Q ss_pred ceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC----CHHHHHhhhCCCceEEEEeC
Q 016612 72 RALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC----DLDEVASAIGPWTKLVWVES 147 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~----d~~~l~~~~~~~~~~v~~~~ 147 (386)
+.|+..+||..+-. ..++ --|+--..+.....+++..+ +..+-++-.+... +.+.+.+.+.-+.....+.+
T Consensus 65 dVIISRGgta~~Lr--~~~~--iPVV~I~vs~~Dil~aL~~a-~~~~~kIavVg~~~~~~~~~~i~~ll~~~i~~~~~~~ 139 (225)
T 2pju_A 65 DAIIAAGSNGAYLK--SRLS--VPVILIKPSGYDVLQFLAKA-GKLTSSIGVVTYQETIPALVAFQKTFNLRLDQRSYIT 139 (225)
T ss_dssp SEEEEEHHHHHHHH--TTCS--SCEEEECCCHHHHHHHHHHT-TCTTSCEEEEEESSCCHHHHHHHHHHTCCEEEEEESS
T ss_pred eEEEeCChHHHHHH--hhCC--CCEEEecCCHHHHHHHHHHH-HhhCCcEEEEeCchhhhHHHHHHHHhCCceEEEEeCC
Confidence 45555555654321 1121 22443333444445554333 3444344333322 45667777765555544322
Q ss_pred CCCCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 148 PTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 148 ~~nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
+ .+.+...+-+++.|+-+|+-+.
T Consensus 140 ~-------ee~~~~i~~l~~~G~~vVVG~~ 162 (225)
T 2pju_A 140 E-------EDARGQINELKANGTEAVVGAG 162 (225)
T ss_dssp H-------HHHHHHHHHHHHTTCCEEEESH
T ss_pred H-------HHHHHHHHHHHHCCCCEEECCH
Confidence 2 3456677777777877766443
No 298
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=40.26 E-value=1e+02 Score=25.61 Aligned_cols=76 Identities=16% Similarity=0.121 Sum_probs=42.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+.+.|.+|++. ...-....... ...+..+. .+...+..|.+++++.++ .+.
T Consensus 5 k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (258)
T 3oid_A 5 KCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETA-EEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGRL 83 (258)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467778887776 3556688889888764 33222221111 22223343 444455568877776654 256
Q ss_pred eEEEEeCC
Q 016612 141 KLVWVESP 148 (386)
Q Consensus 141 ~~v~~~~~ 148 (386)
..++-+..
T Consensus 84 d~lv~nAg 91 (258)
T 3oid_A 84 DVFVNNAA 91 (258)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 66665543
No 299
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=40.24 E-value=1.2e+02 Score=25.06 Aligned_cols=76 Identities=11% Similarity=0.097 Sum_probs=41.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC-----CCceE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG-----PWTKL 142 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~-----~~~~~ 142 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-......... ++..+.++.. .|..|.+++++.++ .+..+
T Consensus 8 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id~ 86 (252)
T 3h7a_A 8 ATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAE-IEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLEV 86 (252)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCceE
Confidence 456777777666 35566788898887654433332222222 2223444444 45557777776654 25566
Q ss_pred EEEeCC
Q 016612 143 VWVESP 148 (386)
Q Consensus 143 v~~~~~ 148 (386)
++-+..
T Consensus 87 lv~nAg 92 (252)
T 3h7a_A 87 TIFNVG 92 (252)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 654433
No 300
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=40.12 E-value=38 Score=26.45 Aligned_cols=88 Identities=16% Similarity=0.066 Sum_probs=51.0
Q ss_pred ceEEeCcHHHHHHHHHHhcCC-CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhh-hCCCceEEEEeCCC
Q 016612 72 RALCFTSGMAALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASA-IGPWTKLVWVESPT 149 (386)
Q Consensus 72 ~~i~~~~gt~al~~~~~~~~~-g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~-~~~~~~~v~~~~~~ 149 (386)
..++++.|.-+..++..+.+. |-.|++.+..-... ..++..|.++...+..+.+.+.++ --.+.++|++..++
T Consensus 41 ~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~-----~~~~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~ 115 (183)
T 3c85_A 41 QVLILGMGRIGTGAYDELRARYGKISLGIEIREEAA-----QQHRSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPH 115 (183)
T ss_dssp SEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHH-----HHHHHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSS
T ss_pred cEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHH-----HHHHHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCC
Confidence 578888888776666555555 66666554432111 223346777777677787777765 12356777765543
Q ss_pred CCCcccccHHHHHHHHHHcC
Q 016612 150 NPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~ 169 (386)
. .....+...+++.+
T Consensus 116 ~-----~~~~~~~~~~~~~~ 130 (183)
T 3c85_A 116 H-----QGNQTALEQLQRRN 130 (183)
T ss_dssp H-----HHHHHHHHHHHHTT
T ss_pred h-----HHHHHHHHHHHHHC
Confidence 1 12344555666643
No 301
>2ioj_A Hypothetical protein AF_1212; NYSGXRC, PFAM:DRTGG, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.15A {Archaeoglobus fulgidus} SCOP: c.98.2.2
Probab=40.08 E-value=95 Score=23.03 Aligned_cols=48 Identities=13% Similarity=0.167 Sum_probs=31.9
Q ss_pred EEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 121 VKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 121 ~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
++.++-+..+.+..++. .++.+++++....|. +++.++|+++|++++.
T Consensus 55 l~I~~G~r~~~~l~a~~~~~~~~iIlt~g~~~~------~~i~~~A~~~~ipvl~ 103 (139)
T 2ioj_A 55 ALVTGGDRSDLLLTALEMPNVRCLILTGNLEPV------QLVLTKAEERGVPVIL 103 (139)
T ss_dssp EEEEETTCHHHHHHHTTCTTEEEEEEETTCCCC------HHHHHHHHHHTCCEEE
T ss_pred EEEEcCCHHHHHHHHHhCCCCcEEEEcCCCCCC------HHHHHHHHHCCCeEEE
Confidence 33333334444445565 678888887654443 7888999999998875
No 302
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=39.98 E-value=33 Score=31.60 Aligned_cols=93 Identities=13% Similarity=0.044 Sum_probs=63.5
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCC--CCHHHHHhhhC-CCceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNT--CDLDEVASAIG-PWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~--~d~~~l~~~~~-~~~~~v~~~~~~nptG~~ 155 (386)
+.+.....++++=+.+.+.+|....-...|..+.+..+ +.++--+. .++..+.+.+. ....++.+-. |-.|.+
T Consensus 285 Elid~y~~lle~ypIv~IEDPl~~dD~eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~IlIKv--nQIGgI 362 (452)
T 3otr_A 285 KLKEVYEGWLKKYPIISVEDPFDQDDFASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNCLLLKV--NQIGSV 362 (452)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH--HHHCCH
T ss_pred HHHHHHHHHHhhhCceEEecCCChhhHHHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCEEEeec--cccccH
Confidence 44555555665445778999976655555666666666 66655553 37888888886 3445555432 236888
Q ss_pred ccHHHHHHHHHHcCCEEEEe
Q 016612 156 CDIRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D 175 (386)
.+..+++++|+++|+.+++=
T Consensus 363 TEalka~~lA~~~G~~vmvs 382 (452)
T 3otr_A 363 TEAIEACLLAQKSGWGVQVS 382 (452)
T ss_dssp HHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCeEEEe
Confidence 89999999999999887763
No 303
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=39.39 E-value=58 Score=23.77 Aligned_cols=54 Identities=7% Similarity=0.129 Sum_probs=34.5
Q ss_pred cCCcEEEEeCCCCHHHHHhhhCC---------CceEEEEe--CCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 116 KTGVVVKRVNTCDLDEVASAIGP---------WTKLVWVE--SPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 116 ~~g~~~~~v~~~d~~~l~~~~~~---------~~~~v~~~--~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
..++.+...+..|++++.+.+.+ +-.-|+++ ... ...++.+|.++++++|+.++
T Consensus 14 ~~~l~vl~l~~~d~~~l~~~L~~ki~~aP~FF~~aPVVlDl~~l~----~~~dl~~L~~~l~~~gl~~v 78 (120)
T 3ghf_A 14 SFTLSVVHLHEAEPEVIRQALEDKIAQAPAFLKHAPVVINVSGLE----SPVNWPELHKIVTSTGLRII 78 (120)
T ss_dssp CCCCEEEEEESCCHHHHHHHHHHHHHHSHHHHTTCEEEEEEEECC----SSCCHHHHHHHHHTTTCEEE
T ss_pred eeeEEEEEeCCCCHHHHHHHHHHHHHhChHhhCCCcEEEEccccC----ChHHHHHHHHHHHHcCCEEE
Confidence 34556666666788777766541 12233443 222 23689999999999998875
No 304
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=39.22 E-value=89 Score=24.40 Aligned_cols=68 Identities=9% Similarity=-0.010 Sum_probs=40.2
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
.+++++++..+ .++..+++.|.+|.+..-.-... ......++++...+..|.+++.+.++ +...|+-.
T Consensus 5 ~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~-~~d~vi~~ 74 (206)
T 1hdo_A 5 KIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRL-----PSEGPRPAHVVVGDVLQAADVDKTVA-GQDAVIVL 74 (206)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGS-----CSSSCCCSEEEESCTTSHHHHHHHHT-TCSEEEEC
T ss_pred EEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhc-----ccccCCceEEEEecCCCHHHHHHHHc-CCCEEEEC
Confidence 35566665444 45666777788776433221111 11113467777788889999998886 45666654
No 305
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=39.13 E-value=1.2e+02 Score=25.53 Aligned_cols=76 Identities=7% Similarity=0.094 Sum_probs=43.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-.........+ +.. .+.....+..|.+++++.++ .+..
T Consensus 33 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD 111 (276)
T 3r1i_A 33 KRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEI-AGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGID 111 (276)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHH-HHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-HhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777676 355667888988876544332222222222 222 34455556668887776664 2567
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 112 ~lvnnAg 118 (276)
T 3r1i_A 112 IAVCNAG 118 (276)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765533
No 306
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=38.59 E-value=1.2e+02 Score=25.01 Aligned_cols=76 Identities=12% Similarity=0.124 Sum_probs=41.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc---cCCcEEEEeCCCCHHHHHhhhCC-----Cce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---KTGVVVKRVNTCDLDEVASAIGP-----WTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~---~~g~~~~~v~~~d~~~l~~~~~~-----~~~ 141 (386)
..+++++|+.++ .++..+.+.|.+|++..-.-.........+.. ...+.+...+..|.+++++.++. ...
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~gid 87 (260)
T 2z1n_A 8 KLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGGAD 87 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 456777777666 45566778888887643322111111111111 11355566677788887776651 266
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 88 ~lv~~A 93 (260)
T 2z1n_A 88 ILVYST 93 (260)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 307
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=38.52 E-value=1.2e+02 Score=25.40 Aligned_cols=75 Identities=15% Similarity=0.225 Sum_probs=40.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC----cEEEEeCCCCHHHHHhhhC------CC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG----VVVKRVNTCDLDEVASAIG------PW 139 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g----~~~~~v~~~d~~~l~~~~~------~~ 139 (386)
..+++++|+.++ .++..+++.|..|++..-.-....... ..++..+ +.+...+..|.+++++.++ .+
T Consensus 33 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 111 (279)
T 1xg5_A 33 RLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELA-AECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHSG 111 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHH-HHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 456677777666 455667788888876433211111111 1111222 3444556668887776654 25
Q ss_pred ceEEEEeC
Q 016612 140 TKLVWVES 147 (386)
Q Consensus 140 ~~~v~~~~ 147 (386)
..+++-+.
T Consensus 112 iD~vi~~A 119 (279)
T 1xg5_A 112 VDICINNA 119 (279)
T ss_dssp CSEEEECC
T ss_pred CCEEEECC
Confidence 67776543
No 308
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=38.50 E-value=1.2e+02 Score=25.58 Aligned_cols=75 Identities=15% Similarity=0.183 Sum_probs=43.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-.........+ ...+.....|..|.+++++.++ .+..++
T Consensus 30 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 30 KVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI--GCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp CEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH--CSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467778787666 455667888988886543322221111111 1234555667678887776654 256676
Q ss_pred EEeCC
Q 016612 144 WVESP 148 (386)
Q Consensus 144 ~~~~~ 148 (386)
+-+..
T Consensus 108 vnnAg 112 (277)
T 3gvc_A 108 VANAG 112 (277)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65533
No 309
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=38.39 E-value=64 Score=28.95 Aligned_cols=69 Identities=10% Similarity=-0.045 Sum_probs=43.4
Q ss_pred hcCCCCEEEecCCCCCcH------HHHHhhhcccCCcEEEEeCCC-------------CHHHHHhhhC-CCceEEEEeCC
Q 016612 89 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (386)
Q Consensus 89 ~~~~g~~Vlv~~~~~~~~------~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~~~-~~~~~v~~~~~ 148 (386)
.+++||+|-+..|+.+.. .....+.++..|.+++.-+.. -.++|.+++. +++++|+..-.
T Consensus 39 ~Lk~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~af~Dp~i~aI~~~rG 118 (371)
T 3tla_A 39 PLAVGDTIGFFSSSAPATVTAKNRFFRGVEFLQRKGFKLVSGKLTGKTDFYRSGTIKERAQEFNELVYNPDITCIMSTIG 118 (371)
T ss_dssp CCCTTCEEEEECSSCCHHHHTHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHTCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 367899998888876532 111234566789998877642 2456766665 67888887654
Q ss_pred CCCCccccc
Q 016612 149 TNPRQQICD 157 (386)
Q Consensus 149 ~nptG~~~~ 157 (386)
-.-+-.++|
T Consensus 119 Gyga~rlLp 127 (371)
T 3tla_A 119 GDNSNSLLP 127 (371)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHHh
Confidence 443444443
No 310
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=38.36 E-value=1.2e+02 Score=25.10 Aligned_cols=77 Identities=13% Similarity=0.190 Sum_probs=43.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc--CCcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.........+.+. ..+.....+..|.+++++.++ .+..
T Consensus 11 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 90 (262)
T 3pk0_A 11 RSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGGID 90 (262)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCC
Confidence 467778777666 355667888988876543322222222222222 234455556668777776654 2567
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 91 ~lvnnAg 97 (262)
T 3pk0_A 91 VVCANAG 97 (262)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765533
No 311
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=38.33 E-value=61 Score=27.81 Aligned_cols=69 Identities=13% Similarity=0.205 Sum_probs=40.7
Q ss_pred CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC------CCHHHHH---hhhC-CCceEEEEeCCCCCCcccccHHHH
Q 016612 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDEVA---SAIG-PWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 92 ~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~d~~~l~---~~~~-~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
++..+++.++.|. -.++.+|++...+.. .++.+|. +.++ .++++|+.+.-.++ +.+
T Consensus 178 ~~~~~v~~H~af~-------Yf~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~-------~~~ 243 (286)
T 3gi1_A 178 RSKTFVTQHTAFS-------YLAKRFGLKQLGISGISPEQEPSPRQLKEIQDFVKEYNVKTIFAEDNVNP-------KIA 243 (286)
T ss_dssp SCCEEEEEESCCH-------HHHHHTTCEEEEEECSCC---CCHHHHHHHHHHHHHTTCCEEEECTTSCT-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 5778888777662 345678888765432 1334444 3343 57777777644443 334
Q ss_pred HHHHHHcCCEEEE
Q 016612 162 AEMAHAHGALLLV 174 (386)
Q Consensus 162 ~~la~~~~~~li~ 174 (386)
..++++.|+.++.
T Consensus 244 ~~la~~~g~~v~~ 256 (286)
T 3gi1_A 244 HAIAKSTGAKVKT 256 (286)
T ss_dssp HHHHHTTTCEEEE
T ss_pred HHHHHHhCCeEEE
Confidence 4567777776653
No 312
>3efb_A Probable SOR-operon regulator; alpha-beta-alpha sandwich, center for structural genomics of infectious diseases, csgid, transcription; HET: MSE; 2.00A {Shigella flexneri 2A} SCOP: c.124.1.8
Probab=38.10 E-value=1.1e+02 Score=25.77 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=32.7
Q ss_pred HHHHHHHHHhhcCCCceEEeCcH---H----HHH-----HHHHHhcCCCCEEEecCCCCCcHHH
Q 016612 57 RDALESLLAKLDKADRALCFTSG---M----AAL-----AAVTHLLGTGEEIVAGDDLYGGTDR 108 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~~~i~~~~g---t----~al-----~~~~~~~~~g~~Vlv~~~~~~~~~~ 108 (386)
..++++.|.+.||.++++++.+. . ..+ ..+..++++|+.|-+ .|+.+..
T Consensus 13 ~~~Le~~L~~~fgL~~v~Vvp~~~~~~~~~~~~lg~~aA~~L~~~l~~~~vIGv---~wG~Tl~ 73 (266)
T 3efb_A 13 NLWLEQQLKQKFGLKDVVVVSGNDEDEETQLAMMGLHGAQLLDRLLEPGDIVGF---SWGRAVS 73 (266)
T ss_dssp CHHHHHHHHHHHTCSEEEEECCCSCCHHHHHHHHHHHHHHHHHHHCCTTCEEEE---CCSHHHH
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCCChHHHHHHHHHHHHHHHHHhCCCCCEEEE---cccHHHH
Confidence 45889999999999988877652 1 112 123446788887767 6777653
No 313
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=38.08 E-value=30 Score=29.69 Aligned_cols=75 Identities=13% Similarity=0.092 Sum_probs=41.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEE--EeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK--RVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-...........+..+.++. ..+..|.+++++.++ .+..
T Consensus 48 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 127 (291)
T 3ijr_A 48 KNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGSLN 127 (291)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777776 355667888988876443222122222233334454444 445557777776654 2566
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
.++-+
T Consensus 128 ~lvnn 132 (291)
T 3ijr_A 128 ILVNN 132 (291)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66544
No 314
>3bzy_B ESCU; auto cleavage protein, flagella, intein, T3SS, membrane, membrane protein, protein transport; 1.20A {Escherichia coli} SCOP: d.367.1.1 PDB: 3c00_B 3bzl_C 3bzo_B 3bzv_B 3c03_C 3bzz_B 3bzx_B
Probab=38.08 E-value=20 Score=24.36 Aligned_cols=20 Identities=15% Similarity=0.120 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCEEEEeCC
Q 016612 158 IRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a 177 (386)
-++|.++|+++|++++.|-.
T Consensus 29 A~~I~~~A~e~~VPi~e~~~ 48 (83)
T 3bzy_B 29 ALQIIKLAELYDIPVIEDIP 48 (83)
T ss_dssp HHHHHHHHHHTTCCEEECHH
T ss_pred HHHHHHHHHHcCCCEEeCHH
Confidence 57899999999999999976
No 315
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=37.70 E-value=78 Score=26.86 Aligned_cols=95 Identities=13% Similarity=0.070 Sum_probs=54.5
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEEe-cCCCCCc----HHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIVA-GDDLYGG----TDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vlv-~~~~~~~----~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+++++++ -+-+++..+++.|..|.+ .+..-.. ....+ ......|++++..+..|.+.+.++++ +..+|+..
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~~ 84 (308)
T 1qyc_A 7 ILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLL-ESFKASGANIVHGSIDDHASLVEAVK-NVDVVIST 84 (308)
T ss_dssp EEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHH-HHHHTTTCEEECCCTTCHHHHHHHHH-TCSEEEEC
T ss_pred EEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHH-HHHHhCCCEEEEeccCCHHHHHHHHc-CCCEEEEC
Confidence 4555544 444566667777766653 3332111 11111 11235678888888889999998886 35566544
Q ss_pred CCCCCCcccccHHHHHHHHHHcC-CEEE
Q 016612 147 SPTNPRQQICDIRKIAEMAHAHG-ALLL 173 (386)
Q Consensus 147 ~~~nptG~~~~l~~i~~la~~~~-~~li 173 (386)
.... .+.....+.+.|++.+ +--+
T Consensus 85 a~~~---~~~~~~~l~~aa~~~g~v~~~ 109 (308)
T 1qyc_A 85 VGSL---QIESQVNIIKAIKEVGTVKRF 109 (308)
T ss_dssp CCGG---GSGGGHHHHHHHHHHCCCSEE
T ss_pred Ccch---hhhhHHHHHHHHHhcCCCceE
Confidence 3211 1234578888998887 5333
No 316
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=37.66 E-value=89 Score=26.27 Aligned_cols=76 Identities=14% Similarity=0.100 Sum_probs=43.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe--CCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v--~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-......... ++..+.++..+ |..|.+++++.++ .+..
T Consensus 27 k~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 105 (271)
T 4ibo_A 27 RTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQE-FRNVGHDAEAVAFDVTSESEIIEAFARLDEQGIDVD 105 (271)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHH-HHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCC
Confidence 567778787776 35566888899888765433222222212 22334444444 4457777776654 2566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 106 ~lv~nAg 112 (271)
T 4ibo_A 106 ILVNNAG 112 (271)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665533
No 317
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=37.44 E-value=1.4e+02 Score=24.70 Aligned_cols=76 Identities=13% Similarity=0.102 Sum_probs=41.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCc--HHHHHhhhcccCCcEEEEe--CCCCHHHHHhhhC------CC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG------PW 139 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~--~~~~~~~~~~~~g~~~~~v--~~~d~~~l~~~~~------~~ 139 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.. .........+..+.++..+ |..|.+++++.++ .+
T Consensus 12 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 91 (262)
T 3ksu_A 12 KVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEFGK 91 (262)
T ss_dssp CEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHHCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 467777777776 4556688899888864211111 1111112223335555544 4558777776664 35
Q ss_pred ceEEEEeC
Q 016612 140 TKLVWVES 147 (386)
Q Consensus 140 ~~~v~~~~ 147 (386)
..+++-+.
T Consensus 92 iD~lvnnA 99 (262)
T 3ksu_A 92 VDIAINTV 99 (262)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 66665543
No 318
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=37.23 E-value=54 Score=26.15 Aligned_cols=90 Identities=9% Similarity=0.038 Sum_probs=46.1
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHH
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
+++..+......|.+|++..|.-..-. .-..+....|.........+.+++.+.+..+..+|+++-.+.-+-. -++.
T Consensus 24 ~ll~~a~r~~~~g~kV~v~k~~~d~r~-~~~~i~s~~g~~~~a~~~~~~~~i~~~~~~~~dvViIDEaqfl~~~--~v~~ 100 (191)
T 1xx6_A 24 ELIRRIRRAKIAKQKIQVFKPEIDNRY-SKEDVVSHMGEKEQAVAIKNSREILKYFEEDTEVIAIDEVQFFDDE--IVEI 100 (191)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC--------CEEECTTSCEEECEEESSSTHHHHHCCTTCSEEEECSGGGSCTH--HHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEeccCccc-hHHHHHhhcCCceeeEeeCCHHHHHHHHhccCCEEEEECCCCCCHH--HHHH
Confidence 444555555566777766543321110 0124455566554444434445666666555788888755442211 1455
Q ss_pred HHHHHHHcCCEEEE
Q 016612 161 IAEMAHAHGALLLV 174 (386)
Q Consensus 161 i~~la~~~~~~li~ 174 (386)
+.+++.+ ++.+|+
T Consensus 101 l~~l~~~-~~~Vi~ 113 (191)
T 1xx6_A 101 VNKIAES-GRRVIC 113 (191)
T ss_dssp HHHHHHT-TCEEEE
T ss_pred HHHHHhC-CCEEEE
Confidence 5555554 787776
No 319
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=37.23 E-value=81 Score=25.94 Aligned_cols=72 Identities=18% Similarity=0.149 Sum_probs=42.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+.+.|.+|++..-.-.. .....+..++.....+..|.+++++.++ .+..++
T Consensus 6 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (245)
T 1uls_A 6 KAVLITGAAHGIGRATLELFAKEGARLVACDIEEGP----LREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGV 81 (245)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHH----HHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 356677777666 3556677889888764322111 1223333356777777778888777654 256666
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 82 vn~A 85 (245)
T 1uls_A 82 VHYA 85 (245)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 320
>4gqr_A Pancreatic alpha-amylase; glycosyl hydrolase, diabetes, obesity, digestion, glycosidas inhibition, flavonol, drug design; HET: NAG MYC; 1.20A {Homo sapiens} PDB: 1cpu_A* 1bsi_A 1u2y_A* 1u30_A* 1u33_A* 1xcw_A* 1xcx_A* 1xd0_A* 1xd1_A* 2qmk_A* 2qv4_A* 3bai_A* 3baj_A* 3baw_A* 3ij7_A* 1hny_A* 3ij9_A* 3ij8_A* 4gqq_A* 1kgw_A* ...
Probab=37.15 E-value=19 Score=33.51 Aligned_cols=82 Identities=12% Similarity=0.101 Sum_probs=49.5
Q ss_pred CCCCEEEecCCCCCcHHHHHh---hhcccCCcEEEEeCCCC--HH---HHH---hhhCCCceEEEEeCCCCCCcccccHH
Q 016612 91 GTGEEIVAGDDLYGGTDRLLS---RVTPKTGVVVKRVNTCD--LD---EVA---SAIGPWTKLVWVESPTNPRQQICDIR 159 (386)
Q Consensus 91 ~~g~~Vlv~~~~~~~~~~~~~---~~~~~~g~~~~~v~~~d--~~---~l~---~~~~~~~~~v~~~~~~nptG~~~~l~ 159 (386)
.+|..|++.-..+ .+..+.. ..++..|+.-+.+++.. .. ... .-..+ +. + .+....|...+++
T Consensus 7 ~~g~~~i~~~f~W-~w~~ia~e~~~yl~~~G~~~v~~~P~~e~~~~~~~~~~~~~~Y~~-~d--y--~i~~~~Gt~~df~ 80 (496)
T 4gqr_A 7 QQGRTSIVHLFEW-RWVDIALECERYLAPKGFGGVQVSPPNENVAIYNPFRPWWERYQP-VS--Y--KLCTRSGNEDEFR 80 (496)
T ss_dssp CTTCCEEEEETTC-CHHHHHHHHHHTTTTTTCCEEEECCCSCBBCCTTTTSCGGGGGSB-SC--S--CSCBTTBCHHHHH
T ss_pred CCCCcEEEEecCC-CHHHHHHHHHHHHHHhCCCEEEeCccccCccCCCCCCCcccccCc-cC--c--eeCCCCCCHHHHH
Confidence 3566677655444 2433322 34677888888887531 00 000 00000 11 1 2344567778899
Q ss_pred HHHHHHHHcCCEEEEeCCC
Q 016612 160 KIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 160 ~i~~la~~~~~~li~D~a~ 178 (386)
++++.||++|+-||+|-++
T Consensus 81 ~lv~~aH~~Gi~VilD~V~ 99 (496)
T 4gqr_A 81 NMVTRCNNVGVRIYVDAVI 99 (496)
T ss_dssp HHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHCCCEEEEEEcc
Confidence 9999999999999999995
No 321
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=37.05 E-value=1.3e+02 Score=24.90 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=42.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE--EEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-....... ...+..+.+ ....+..|.+++++.++ .+..
T Consensus 7 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 85 (257)
T 3imf_A 7 KVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAK-LEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRID 85 (257)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887776 355667888988876543322222221 222333434 44455567777776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 86 ~lv~nA 91 (257)
T 3imf_A 86 ILINNA 91 (257)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 322
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=36.90 E-value=1.4e+02 Score=25.02 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=42.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-....... ..++..+ +.....+..|.+++++.++ .+..
T Consensus 25 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 103 (279)
T 3sju_A 25 QTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAV-DGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGPIG 103 (279)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCc
Confidence 467777777666 355667888988876543322222121 1222334 3444455668877776654 2566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 104 ~lv~nAg 110 (279)
T 3sju_A 104 ILVNSAG 110 (279)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665543
No 323
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=36.66 E-value=1.2e+02 Score=25.70 Aligned_cols=80 Identities=13% Similarity=0.192 Sum_probs=44.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
+.+++|+|+.+| .....+.+.|-.|++.+-.-.. +...++..|. .....+..|.+++++.++ .+..
T Consensus 30 KvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~----l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iD 105 (273)
T 4fgs_A 30 KIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDV----LDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRID 105 (273)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH----HHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEE
T ss_pred CEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHH----HHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 466677777776 3556688899988875433211 2233333333 334445557777776654 3566
Q ss_pred EEEEeCCCCCCccc
Q 016612 142 LVWVESPTNPRQQI 155 (386)
Q Consensus 142 ~v~~~~~~nptG~~ 155 (386)
.++-+...++.+.+
T Consensus 106 iLVNNAG~~~~~~~ 119 (273)
T 4fgs_A 106 VLFVNAGGGSMLPL 119 (273)
T ss_dssp EEEECCCCCCCCCT
T ss_pred EEEECCCCCCCCCh
Confidence 66544434443433
No 324
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=36.50 E-value=1e+02 Score=24.87 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=39.5
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc--CCcEEEEeCCCCHHHHHhhhC---CCceEEEE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG---PWTKLVWV 145 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~d~~~l~~~~~---~~~~~v~~ 145 (386)
.+++++|+.+| .++..+++.|.+|++..-.-... ....+. ..+.+...+..|.+++++.+. +....++-
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKL----STVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHH----HHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 35677777666 35566788888887654332212 222222 234555566668888877664 23345544
Q ss_pred eC
Q 016612 146 ES 147 (386)
Q Consensus 146 ~~ 147 (386)
+.
T Consensus 79 ~A 80 (230)
T 3guy_A 79 SA 80 (230)
T ss_dssp CC
T ss_pred eC
Confidence 43
No 325
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=36.49 E-value=1e+02 Score=25.41 Aligned_cols=76 Identities=20% Similarity=0.187 Sum_probs=42.7
Q ss_pred CceEEeCcHHHHH--HHHHHhcCCCCEEEecC-CCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CC
Q 016612 71 DRALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PW 139 (386)
Q Consensus 71 ~~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~-~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~ 139 (386)
+..+++|+|+.+| .++..+++.|..|++.. ..-......... .+..+ +.+...+..|.+++++.++ .+
T Consensus 13 ~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 91 (256)
T 3ezl_A 13 QRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLED-QKALGFDFYASEGNVGDWDSTKQAFDKVKAEVGE 91 (256)
T ss_dssp CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHH-HHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHH-HHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 3577888888777 35566788898887532 222222222112 22223 4555566668777776654 25
Q ss_pred ceEEEEeC
Q 016612 140 TKLVWVES 147 (386)
Q Consensus 140 ~~~v~~~~ 147 (386)
..+++-+.
T Consensus 92 id~lv~~A 99 (256)
T 3ezl_A 92 IDVLVNNA 99 (256)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 66665543
No 326
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=36.45 E-value=1e+02 Score=25.35 Aligned_cols=73 Identities=10% Similarity=0.076 Sum_probs=42.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhc-ccCCcEEEEeCCCCHHHHHhhhC------CCceE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
..+++|+|+.+| .++..+++.|.+|++.+-.-... .... +.........+..|.+++++.++ .+...
T Consensus 3 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 78 (247)
T 3dii_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRS----ADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDV 78 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHhcccCCeEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 356777777666 45566788898887654322111 1222 22334556667778887776664 36677
Q ss_pred EEEeCC
Q 016612 143 VWVESP 148 (386)
Q Consensus 143 v~~~~~ 148 (386)
++-+..
T Consensus 79 lv~nAg 84 (247)
T 3dii_A 79 LVNNAC 84 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 765543
No 327
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=36.13 E-value=51 Score=26.54 Aligned_cols=88 Identities=11% Similarity=0.053 Sum_probs=50.0
Q ss_pred EEeCcHHHHH--HHHHHhc-CCCCEEEecCCCCCcHHHHHhhhc-ccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCC
Q 016612 74 LCFTSGMAAL--AAVTHLL-GTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPT 149 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~-~~g~~Vlv~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~ 149 (386)
+++++++..+ .++..++ +.|.+|++..-.-. . ...... ...+++++..+..|.+++.+.++ +..+++.+...
T Consensus 8 vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~--~-~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~-~~d~vv~~ag~ 83 (221)
T 3r6d_A 8 ITILGAAGQIAQXLTATLLTYTDMHITLYGRQLK--T-RIPPEIIDHERVTVIEGSFQNPGXLEQAVT-NAEVVFVGAME 83 (221)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHH--H-HSCHHHHTSTTEEEEECCTTCHHHHHHHHT-TCSEEEESCCC
T ss_pred EEEEeCCcHHHHHHHHHHHhcCCceEEEEecCcc--c-cchhhccCCCceEEEECCCCCHHHHHHHHc-CCCEEEEcCCC
Confidence 5566655444 4556677 68888775432210 0 111111 34567777778889999998886 56666654322
Q ss_pred CCCcccccHHHHHHHHHHcC
Q 016612 150 NPRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~ 169 (386)
. .+. .+.+.+.+++.+
T Consensus 84 ~---n~~-~~~~~~~~~~~~ 99 (221)
T 3r6d_A 84 S---GSD-MASIVKALSRXN 99 (221)
T ss_dssp C---HHH-HHHHHHHHHHTT
T ss_pred C---Chh-HHHHHHHHHhcC
Confidence 1 112 566677676643
No 328
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=36.06 E-value=94 Score=25.80 Aligned_cols=77 Identities=10% Similarity=0.085 Sum_probs=42.4
Q ss_pred ceEEeCcHH-HHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGM-AAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt-~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+ .+| .++..+++.|..|++..-.-.........+.+.. .+.+...|..|.+++++.++ .+.
T Consensus 23 k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 102 (266)
T 3o38_A 23 KVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAGRL 102 (266)
T ss_dssp CEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhCCC
Confidence 356666665 455 4566678889888765433222222222222222 34555556668877776654 256
Q ss_pred eEEEEeCC
Q 016612 141 KLVWVESP 148 (386)
Q Consensus 141 ~~v~~~~~ 148 (386)
..++-+..
T Consensus 103 d~li~~Ag 110 (266)
T 3o38_A 103 DVLVNNAG 110 (266)
T ss_dssp CEEEECCC
T ss_pred cEEEECCC
Confidence 67765543
No 329
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=36.01 E-value=1.1e+02 Score=25.41 Aligned_cols=75 Identities=9% Similarity=0.120 Sum_probs=42.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+++.|.+|++.+-.-.........+ .........+..|.+++++.++ .+...+
T Consensus 9 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 86 (259)
T 4e6p_A 9 KSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI--GPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL 86 (259)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh--CCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456677777666 455668888988876543322221111111 1234555566668887776654 256676
Q ss_pred EEeCC
Q 016612 144 WVESP 148 (386)
Q Consensus 144 ~~~~~ 148 (386)
+-+..
T Consensus 87 v~~Ag 91 (259)
T 4e6p_A 87 VNNAA 91 (259)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65543
No 330
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=36.00 E-value=1.1e+02 Score=24.89 Aligned_cols=75 Identities=16% Similarity=0.124 Sum_probs=42.4
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEEE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLVW 144 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v~ 144 (386)
.+++|+|+.+| .++..+.+.|.+|++..-.-.......... . .++.....|..|.+++++.++ .+..+++
T Consensus 5 ~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 5 HIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLL-G-NAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-G-GGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh-c-CCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 46677777666 355667788988876543322222111111 1 135566666668877776654 3566776
Q ss_pred EeCCC
Q 016612 145 VESPT 149 (386)
Q Consensus 145 ~~~~~ 149 (386)
-+...
T Consensus 83 nnAg~ 87 (235)
T 3l6e_A 83 HCAGT 87 (235)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 55433
No 331
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=36.00 E-value=1.5e+02 Score=25.59 Aligned_cols=74 Identities=15% Similarity=0.117 Sum_probs=40.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCC----------CCcHHHHHhhhcccCCcEEEEeC--CCCHHHHHhhhC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL----------YGGTDRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG 137 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~----------~~~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~~~ 137 (386)
..+++|+|+.+| .++..+++.|..|++.+-. -....... ..+...+.++..+. ..|.+++++.++
T Consensus 28 k~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~ 106 (322)
T 3qlj_A 28 RVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVV-DEITAAGGEAVADGSNVADWDQAAGLIQ 106 (322)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHH-HHHHHTTCEEEEECCCTTSHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 467788887776 3556688889888865432 11122111 22233444555444 447777666554
Q ss_pred ------CCceEEEEe
Q 016612 138 ------PWTKLVWVE 146 (386)
Q Consensus 138 ------~~~~~v~~~ 146 (386)
.+..+++-+
T Consensus 107 ~~~~~~g~iD~lv~n 121 (322)
T 3qlj_A 107 TAVETFGGLDVLVNN 121 (322)
T ss_dssp HHHHHHSCCCEEECC
T ss_pred HHHHHcCCCCEEEEC
Confidence 256666544
No 332
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=35.97 E-value=1.2e+02 Score=25.30 Aligned_cols=78 Identities=12% Similarity=0.114 Sum_probs=43.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-....... ..++..+.++.. .+..|.+++++.++ .+..
T Consensus 5 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 83 (264)
T 3tfo_A 5 KVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIA-TEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRID 83 (264)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 457778887776 355667888988876543322222111 222233444444 45557777776654 3566
Q ss_pred EEEEeCCCC
Q 016612 142 LVWVESPTN 150 (386)
Q Consensus 142 ~v~~~~~~n 150 (386)
+++-+....
T Consensus 84 ~lVnnAG~~ 92 (264)
T 3tfo_A 84 VLVNNAGVM 92 (264)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 766554333
No 333
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=35.89 E-value=93 Score=25.83 Aligned_cols=76 Identities=7% Similarity=0.062 Sum_probs=41.7
Q ss_pred ceEEeCcHH--HHH--HHHHHhcCCCCEEEecCCCCCcH-HHHHhhhcccCCcEEEEeC--CCCHHHHHhhhC------C
Q 016612 72 RALCFTSGM--AAL--AAVTHLLGTGEEIVAGDDLYGGT-DRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG------P 138 (386)
Q Consensus 72 ~~i~~~~gt--~al--~~~~~~~~~g~~Vlv~~~~~~~~-~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~~~------~ 138 (386)
..+++++|+ .++ .++..+++.|..|++..-.-... ......+.+..+.++..+. ..|.+++++.++ .
T Consensus 21 k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (267)
T 3gdg_A 21 KVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVADFG 100 (267)
T ss_dssp CEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHHTS
T ss_pred CEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHHcC
Confidence 456666666 555 45566788898887654332222 2222333333344555544 447777766554 3
Q ss_pred CceEEEEeC
Q 016612 139 WTKLVWVES 147 (386)
Q Consensus 139 ~~~~v~~~~ 147 (386)
+..+++-+.
T Consensus 101 ~id~li~nA 109 (267)
T 3gdg_A 101 QIDAFIANA 109 (267)
T ss_dssp CCSEEEECC
T ss_pred CCCEEEECC
Confidence 566776553
No 334
>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*
Probab=35.86 E-value=1.2e+02 Score=26.13 Aligned_cols=95 Identities=20% Similarity=0.258 Sum_probs=51.3
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCC
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPT 149 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~ 149 (386)
.+++++|+..+ +++..+++.|..|++..-.-.... .......+++++..+..|.+++++++.. ++.+|+-+...
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~---~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~ 98 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKR---EVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA 98 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCG---GGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccch---hhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence 46666666444 466667888888775332111110 0011114567777777788888887752 56666654332
Q ss_pred CCCcc---------cccHHHHHHHHHHcCC
Q 016612 150 NPRQQ---------ICDIRKIAEMAHAHGA 170 (386)
Q Consensus 150 nptG~---------~~~l~~i~~la~~~~~ 170 (386)
...+. +.-...+.+.|.+.++
T Consensus 99 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~ 128 (330)
T 2pzm_A 99 YKDPDDWAEDAATNVQGSINVAKAASKAGV 128 (330)
T ss_dssp CSCTTCHHHHHHHHTHHHHHHHHHHHHHTC
T ss_pred CCCccccChhHHHHHHHHHHHHHHHHHcCC
Confidence 21110 1113467777777664
No 335
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=35.81 E-value=54 Score=27.54 Aligned_cols=74 Identities=9% Similarity=0.040 Sum_probs=40.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+++.|..|++. ...-...... ....+..+.++.. .+..|.+++++.++ .+.
T Consensus 27 k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 105 (272)
T 4e3z_A 27 PVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAV-VAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFGRL 105 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHH-HHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHH-HHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 567788888776 3556688889888653 3222111111 1222333444444 45557777766654 256
Q ss_pred eEEEEe
Q 016612 141 KLVWVE 146 (386)
Q Consensus 141 ~~v~~~ 146 (386)
.+++-+
T Consensus 106 d~li~n 111 (272)
T 4e3z_A 106 DGLVNN 111 (272)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 666654
No 336
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=35.79 E-value=62 Score=27.34 Aligned_cols=75 Identities=11% Similarity=0.073 Sum_probs=40.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC-cEEEEeCCCCHHHHHhhhC------CCceE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-VVVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g-~~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-.........+ ...+ +.+...+..|.+++++.++ .+..+
T Consensus 30 k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~ 108 (276)
T 2b4q_A 30 RIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRL-SAYGDCQAIPADLSSEAGARRLAQALGELSARLDI 108 (276)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH-TTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCSE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-HhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 456777777666 455667788888876543321111111122 2223 3333345557777776654 25667
Q ss_pred EEEeC
Q 016612 143 VWVES 147 (386)
Q Consensus 143 v~~~~ 147 (386)
++-+.
T Consensus 109 lvnnA 113 (276)
T 2b4q_A 109 LVNNA 113 (276)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 337
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=35.38 E-value=45 Score=28.00 Aligned_cols=75 Identities=8% Similarity=0.165 Sum_probs=41.8
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+++.|.+|++.+-.-.........+.....+.+...+..|.+++++.++ .+..++
T Consensus 17 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 96 (278)
T 2bgk_A 17 KVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLDIM 96 (278)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456777777666 455667788888876533211111111112111145666667778888777664 256666
Q ss_pred EEe
Q 016612 144 WVE 146 (386)
Q Consensus 144 ~~~ 146 (386)
+-+
T Consensus 97 i~~ 99 (278)
T 2bgk_A 97 FGN 99 (278)
T ss_dssp EEC
T ss_pred EEC
Confidence 644
No 338
>2o1e_A YCDH; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.60A {Bacillus subtilis}
Probab=35.36 E-value=72 Score=27.73 Aligned_cols=68 Identities=12% Similarity=0.168 Sum_probs=40.8
Q ss_pred CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC------CCHH---HHHhhhC-CCceEEEEeCCCCCCcccccHHHH
Q 016612 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLD---EVASAIG-PWTKLVWVESPTNPRQQICDIRKI 161 (386)
Q Consensus 92 ~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~d~~---~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i 161 (386)
++..+++..+.|. -.++.+|++...+.. .++. ++.+.++ .++++|+.+.-.++ +.+
T Consensus 189 ~~~~~v~~H~af~-------Yfa~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~If~e~~~~~-------~~~ 254 (312)
T 2o1e_A 189 EKKEFITQHTAFG-------YLAKEYGLKQVPIAGLSPDQEPSAASLAKLKTYAKEHNVKVIYFEEIASS-------KVA 254 (312)
T ss_dssp SCCEEEESSCTTH-------HHHHHTTCEEEECSSCCSSSCCCHHHHHHHHHHTTSSCCCEEECSSCCCH-------HHH
T ss_pred CCCEEEEECCchH-------HHHHHCCCeEEEeeccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh-------HHH
Confidence 5677888766652 345688888776542 1344 4444444 56777776544332 445
Q ss_pred HHHHHHcCCEEE
Q 016612 162 AEMAHAHGALLL 173 (386)
Q Consensus 162 ~~la~~~~~~li 173 (386)
..++++.|+.++
T Consensus 255 ~~ia~e~g~~v~ 266 (312)
T 2o1e_A 255 DTLASEIGAKTE 266 (312)
T ss_dssp HHHHHHTCCEEE
T ss_pred HHHHHHhCCcEE
Confidence 556777777654
No 339
>4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis}
Probab=35.35 E-value=48 Score=28.87 Aligned_cols=98 Identities=10% Similarity=0.042 Sum_probs=52.0
Q ss_pred eEEeCcHHHHH--HHHHHhcCCC--CEEEecC-CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEe
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTG--EEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g--~~Vlv~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~ 146 (386)
-+++++|+..+ +++..+++.| -.|++.+ .........+.......+++++..+..|.+.+.+++.. ++.+|+-.
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 105 (346)
T 4egb_A 26 NILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNGELLEHVIKERDVQVIVNF 105 (346)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHHHHHHHHHHHTCCEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCHHHHHHHHhhcCCCEEEEC
Confidence 46666665444 4566677766 4555432 22111111111222234778888888899999988863 46666654
Q ss_pred CCCCCCccc-c-----------cHHHHHHHHHHcCC
Q 016612 147 SPTNPRQQI-C-----------DIRKIAEMAHAHGA 170 (386)
Q Consensus 147 ~~~nptG~~-~-----------~l~~i~~la~~~~~ 170 (386)
......+.. . -...+.+.|++.++
T Consensus 106 A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 141 (346)
T 4egb_A 106 AAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPH 141 (346)
T ss_dssp CCCC---------CHHHHHHTHHHHHHHHHHHHSTT
T ss_pred CcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 322211111 0 13578888888764
No 340
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=35.24 E-value=1.3e+02 Score=24.85 Aligned_cols=74 Identities=15% Similarity=0.166 Sum_probs=41.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+.+.|.+|++. +..-....... ...+..+ +.....|..|.+++++.++ .+.
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 87 (259)
T 3edm_A 9 RTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAV-AEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGEI 87 (259)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHH-HHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCSE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 466777777666 4556678889888765 33222222111 2222333 4455556668777776664 255
Q ss_pred eEEEEe
Q 016612 141 KLVWVE 146 (386)
Q Consensus 141 ~~v~~~ 146 (386)
..++-+
T Consensus 88 d~lv~n 93 (259)
T 3edm_A 88 HGLVHV 93 (259)
T ss_dssp EEEEEC
T ss_pred CEEEEC
Confidence 565544
No 341
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=35.23 E-value=1e+02 Score=25.68 Aligned_cols=76 Identities=12% Similarity=0.067 Sum_probs=41.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEe-cCCCCCcHHHHHhhhcc-cCCcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVA-GDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv-~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|..|++ ....-.........+.. ...+.+...+..|.+++++.++ .+..
T Consensus 27 k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id 106 (267)
T 4iiu_A 27 RSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGAWY 106 (267)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 467788888776 355668888988854 22221111111112111 1234555566668877776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
.++-+.
T Consensus 107 ~li~nA 112 (267)
T 4iiu_A 107 GVVSNA 112 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 342
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=35.13 E-value=41 Score=30.77 Aligned_cols=94 Identities=14% Similarity=0.085 Sum_probs=63.4
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCC--CHHHHHhhhCC-CceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTC--DLDEVASAIGP-WTKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~--d~~~l~~~~~~-~~~~v~~~~~~nptG~~ 155 (386)
+++..+..++++=+.+.+.+|....-...|..+.+..| +.+.--+.. ++.++.+.+.. ...++.+.. |-.|.+
T Consensus 265 eai~~~~~ll~~y~i~~IEdPl~~dD~e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv--~qiGGi 342 (417)
T 3qn3_A 265 ALIERYVELCAKYPICSIEDGLAENDFEGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKP--NQIGTI 342 (417)
T ss_dssp HHHHHHHHHHHHSCEEEEESSSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH--HHHCSH
T ss_pred HHHHHHHHHHhhcceeEEecCCCcccHHHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecC--CCCCCH
Confidence 55555555555545778999976655555556665554 566554432 48888888763 445555443 336888
Q ss_pred ccHHHHHHHHHHcCCEEEEeC
Q 016612 156 CDIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D~ 176 (386)
.+..+++++|+++|+.+++=.
T Consensus 343 Tea~kia~lA~~~G~~v~vsh 363 (417)
T 3qn3_A 343 TQTMRTVRLAQRNNYKCVMSH 363 (417)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHcCCeEEEeC
Confidence 999999999999999887743
No 343
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=35.09 E-value=64 Score=29.60 Aligned_cols=86 Identities=9% Similarity=0.026 Sum_probs=59.9
Q ss_pred HhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCC--CCHHHHHhhhCCC-ceEEEEeCCCCCCcccccHHHHH
Q 016612 88 HLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIA 162 (386)
Q Consensus 88 ~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~l~~i~ 162 (386)
..+.+=+.+.+.+|....-...+..+.+.. .+.+.--+. .+..++.+.+..+ ..+|.+.. |-.|.+.+..+++
T Consensus 283 ~~l~~y~i~~iEdPl~~~D~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i~ik~--~~~GGitea~~i~ 360 (432)
T 2ptz_A 283 KWAHDYPIVSIEDPYDQDDFAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSLLLKI--NQIGTISEAIASS 360 (432)
T ss_dssp HHHHHSCEEEEECCSCTTCHHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECH--HHHCCHHHHHHHH
T ss_pred HHHHhCCceEEECCCCcchHHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEEEecc--cccCCHHHHHHHH
Confidence 445444577899997766555555666665 567754444 5788898888744 45555433 2368889999999
Q ss_pred HHHHHcCCEEEEe
Q 016612 163 EMAHAHGALLLVD 175 (386)
Q Consensus 163 ~la~~~~~~li~D 175 (386)
++|+++|+.+++-
T Consensus 361 ~lA~~~g~~v~~~ 373 (432)
T 2ptz_A 361 KLCMENGWSVMVS 373 (432)
T ss_dssp HHHHHTTCEEEEE
T ss_pred HHHHHcCCeEEec
Confidence 9999999988663
No 344
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=34.95 E-value=1.2e+02 Score=26.34 Aligned_cols=86 Identities=19% Similarity=0.043 Sum_probs=51.1
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCC-C
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP-T 149 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~-~ 149 (386)
.+++++|+..+ +++..+++.|..|++..-.-. ..+++++..+..|.+.+.+.+. ++.+|+-... .
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~-----------~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~A~~~ 88 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPS-----------GTGGEEVVGSLEDGQALSDAIM-GVSAVLHLGAFM 88 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCC-----------SSCCSEEESCTTCHHHHHHHHT-TCSEEEECCCCC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCC-----------CCCccEEecCcCCHHHHHHHHh-CCCEEEECCccc
Confidence 45666665444 566667778877765322111 1456777778889999998887 5666664432 2
Q ss_pred CCCccc---------ccHHHHHHHHHHcCC
Q 016612 150 NPRQQI---------CDIRKIAEMAHAHGA 170 (386)
Q Consensus 150 nptG~~---------~~l~~i~~la~~~~~ 170 (386)
...... .....+.+.|++.++
T Consensus 89 ~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~ 118 (347)
T 4id9_A 89 SWAPADRDRMFAVNVEGTRRLLDAASAAGV 118 (347)
T ss_dssp CSSGGGHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred CcchhhHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 211111 013567888888775
No 345
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.68 E-value=1.1e+02 Score=25.63 Aligned_cols=77 Identities=16% Similarity=0.184 Sum_probs=40.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCC--------CC--cH--HHHHhhhcccCCcEE--EEeCCCCHHHHHhh
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL--------YG--GT--DRLLSRVTPKTGVVV--KRVNTCDLDEVASA 135 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~--------~~--~~--~~~~~~~~~~~g~~~--~~v~~~d~~~l~~~ 135 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-. |. .. ........+..+.++ ...+..|.+++++.
T Consensus 16 k~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~ 95 (280)
T 3pgx_A 16 RVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAALREL 95 (280)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHH
Confidence 467777777666 4556688889888764321 10 11 111112223334444 34455577777766
Q ss_pred hC------CCceEEEEeCC
Q 016612 136 IG------PWTKLVWVESP 148 (386)
Q Consensus 136 ~~------~~~~~v~~~~~ 148 (386)
++ .+..+++-+..
T Consensus 96 ~~~~~~~~g~id~lvnnAg 114 (280)
T 3pgx_A 96 VADGMEQFGRLDVVVANAG 114 (280)
T ss_dssp HHHHHHHHCCCCEEEECCC
T ss_pred HHHHHHHcCCCCEEEECCC
Confidence 54 25666665533
No 346
>2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A*
Probab=34.52 E-value=1.3e+02 Score=26.55 Aligned_cols=68 Identities=10% Similarity=-0.012 Sum_probs=40.9
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
.+++++|+..+ +++..+++.|..|++..-.-... ......+++++..+..|.+++.+.+. +..+|+-.
T Consensus 31 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~v~~~~~Dl~d~~~~~~~~~-~~d~Vih~ 100 (379)
T 2c5a_A 31 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEH-----MTEDMFCDEFHLVDLRVMENCLKVTE-GVDHVFNL 100 (379)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSS-----SCGGGTCSEEEECCTTSHHHHHHHHT-TCSEEEEC
T ss_pred eEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccc-----hhhccCCceEEECCCCCHHHHHHHhC-CCCEEEEC
Confidence 46666665444 45666777787776432211111 11123467777888889999998885 56666654
No 347
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=34.50 E-value=1.2e+02 Score=25.84 Aligned_cols=96 Identities=15% Similarity=0.105 Sum_probs=54.9
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEE-ecCCC-C---CcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIV-AGDDL-Y---GGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vl-v~~~~-~---~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+++++++ -+-.++..+++.|..|. +.+.. - +.....+. .....+++++..+..|.+.+.++++. ..+|+.+
T Consensus 7 ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~-~~~~~~v~~v~~D~~d~~~l~~a~~~-~d~vi~~ 84 (321)
T 3c1o_A 7 IIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLRE-EFRSMGVTIIEGEMEEHEKMVSVLKQ-VDIVISA 84 (321)
T ss_dssp EEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHH-HHHHTTCEEEECCTTCHHHHHHHHTT-CSEEEEC
T ss_pred EEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHH-HhhcCCcEEEEecCCCHHHHHHHHcC-CCEEEEC
Confidence 4555544 34455666667776665 33332 1 11111111 12346788888898899999998874 5666544
Q ss_pred CCCCCCcccccHHHHHHHHHHcC-CEEEE
Q 016612 147 SPTNPRQQICDIRKIAEMAHAHG-ALLLV 174 (386)
Q Consensus 147 ~~~nptG~~~~l~~i~~la~~~~-~~li~ 174 (386)
.... .+...+.+.+.|++.+ +--++
T Consensus 85 a~~~---~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 85 LPFP---MISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp CCGG---GSGGGHHHHHHHHHHCCCCEEE
T ss_pred CCcc---chhhHHHHHHHHHHhCCccEEe
Confidence 3211 1334578888998887 63333
No 348
>1m3s_A Hypothetical protein YCKF; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.95A {Bacillus subtilis} SCOP: c.80.1.3 PDB: 1viv_A
Probab=34.37 E-value=1.6e+02 Score=22.76 Aligned_cols=34 Identities=6% Similarity=-0.016 Sum_probs=22.3
Q ss_pred CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 137 GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 137 ~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
+++.-+|+++. +|...++.++.+.+++.|+.+|.
T Consensus 78 ~~~d~vI~iS~----sG~t~~~~~~~~~ak~~g~~vi~ 111 (186)
T 1m3s_A 78 AEGDLVIIGSG----SGETKSLIHTAAKAKSLHGIVAA 111 (186)
T ss_dssp CTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEE
T ss_pred CCCCEEEEEcC----CCCcHHHHHHHHHHHHCCCEEEE
Confidence 34455555554 35556677888899999876653
No 349
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=34.35 E-value=55 Score=28.73 Aligned_cols=69 Identities=13% Similarity=0.023 Sum_probs=43.5
Q ss_pred hcCCCCEEEecCCCCCc------HHHHHhhhcccCCcEEEEeCCC-------------CHHHHHhhhC-CCceEEEEeCC
Q 016612 89 LLGTGEEIVAGDDLYGG------TDRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (386)
Q Consensus 89 ~~~~g~~Vlv~~~~~~~------~~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~~~-~~~~~v~~~~~ 148 (386)
.+++||+|-+..|+.+. ......+.++..|.+++.-+.. -.++|.+++. +++++|+....
T Consensus 8 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~agtd~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (327)
T 4h1h_A 8 KLKQGDEIRIIAPSRSIGIMADNQVEIAVNRLTDMGFKVTFGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIG 87 (327)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCcCccCHHHHHHHHHHHHhCCCEEEECcchhhccCcccCCHHHHHHHHHHHhhCCCCCEEEEcCC
Confidence 47899999888886532 1112234567889999887642 2456666654 78899987654
Q ss_pred CCCCccccc
Q 016612 149 TNPRQQICD 157 (386)
Q Consensus 149 ~nptG~~~~ 157 (386)
-.-+-.++|
T Consensus 88 G~g~~rlL~ 96 (327)
T 4h1h_A 88 GFNSNQLLP 96 (327)
T ss_dssp CSCGGGGGG
T ss_pred chhHHHHhh
Confidence 443444443
No 350
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=34.08 E-value=1.2e+02 Score=24.95 Aligned_cols=88 Identities=14% Similarity=0.123 Sum_probs=51.9
Q ss_pred CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 71 ~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
..++++++|..|...+..+++.|-.|.+-+|...... ...++..+++.+.-+. +.+++ +...+|+. .+.+
T Consensus 32 k~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l---~~l~~~~~i~~i~~~~-~~~dL-----~~adLVIa-AT~d 101 (223)
T 3dfz_A 32 RSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEI---NEWEAKGQLRVKRKKV-GEEDL-----LNVFFIVV-ATND 101 (223)
T ss_dssp CCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHH---HHHHHTTSCEEECSCC-CGGGS-----SSCSEEEE-CCCC
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHH---HHHHHcCCcEEEECCC-CHhHh-----CCCCEEEE-CCCC
Confidence 3688999998888888888888888887777654332 2334444455433222 22332 23445543 3333
Q ss_pred CCcccccHHHHHHHHHHcCCEEE
Q 016612 151 PRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li 173 (386)
+ .--..|.+.|+ .++++-
T Consensus 102 ~----~~N~~I~~~ak-~gi~VN 119 (223)
T 3dfz_A 102 Q----AVNKFVKQHIK-NDQLVN 119 (223)
T ss_dssp T----HHHHHHHHHSC-TTCEEE
T ss_pred H----HHHHHHHHHHh-CCCEEE
Confidence 2 22366777887 777643
No 351
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=34.05 E-value=1.1e+02 Score=26.95 Aligned_cols=71 Identities=18% Similarity=0.179 Sum_probs=40.8
Q ss_pred eEEeCcHHHHH--HHHHHhcCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeC
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVES 147 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~ 147 (386)
.+++++|+..+ +++..+++.| ..|++..-.-.... ..+....+++++..+..|.+.+.+++. +..+|+-..
T Consensus 34 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~l~~~~~v~~~~~Dl~d~~~l~~~~~-~~d~Vih~A 107 (377)
T 2q1s_A 34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK---INVPDHPAVRFSETSITDDALLASLQD-EYDYVFHLA 107 (377)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG---GGSCCCTTEEEECSCTTCHHHHHHCCS-CCSEEEECC
T ss_pred EEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch---hhccCCCceEEEECCCCCHHHHHHHhh-CCCEEEECC
Confidence 35666655444 5666677788 77765433221110 011113456666667779999998876 566766543
No 352
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.03 E-value=1.1e+02 Score=25.62 Aligned_cols=29 Identities=21% Similarity=0.322 Sum_probs=20.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGD 100 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~ 100 (386)
..+++|+|+.+| .++..+++.|.+|++.+
T Consensus 11 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~ 41 (287)
T 3pxx_A 11 KVVLVTGGARGQGRSHAVKLAEEGADIILFD 41 (287)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCeEEEEc
Confidence 467777777676 45566888898887643
No 353
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=34.02 E-value=59 Score=26.97 Aligned_cols=76 Identities=9% Similarity=0.076 Sum_probs=42.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc----CCcEEEEeCCCCHHHHHhhhC------CC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK----TGVVVKRVNTCDLDEVASAIG------PW 139 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~----~g~~~~~v~~~d~~~l~~~~~------~~ 139 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.........+... ..+.+...+..|.+++++.++ .+
T Consensus 8 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 87 (250)
T 3nyw_A 8 GLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKYGA 87 (250)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 466777777666 355567778888876543322222221111111 345566667778877776654 35
Q ss_pred ceEEEEeC
Q 016612 140 TKLVWVES 147 (386)
Q Consensus 140 ~~~v~~~~ 147 (386)
..+++-+.
T Consensus 88 iD~lvnnA 95 (250)
T 3nyw_A 88 VDILVNAA 95 (250)
T ss_dssp EEEEEECC
T ss_pred CCEEEECC
Confidence 66666543
No 354
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=33.98 E-value=41 Score=28.20 Aligned_cols=72 Identities=11% Similarity=0.059 Sum_probs=43.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-.... ..++..++.....+..|.+++++.++ .+..++
T Consensus 28 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 103 (260)
T 3gem_A 28 APILITGASQRVGLHCALRLLEHGHRVIISYRTEHASV----TELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAV 103 (260)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHH----HHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 467778787776 355667788887775443322221 22223456777778778887776664 356666
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 104 v~nA 107 (260)
T 3gem_A 104 VHNA 107 (260)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 355
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=33.90 E-value=1.1e+02 Score=25.32 Aligned_cols=76 Identities=12% Similarity=0.045 Sum_probs=42.8
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE--EEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|.+|++..-.-....... ..+...+.+ +...+..|.+++.+.++ .+..
T Consensus 30 k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 108 (262)
T 3rkr_A 30 QVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVE-REIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGRCD 108 (262)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 467788887766 455667888988876543332222221 112223434 44455567777776654 2567
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 109 ~lv~~Ag 115 (262)
T 3rkr_A 109 VLVNNAG 115 (262)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765533
No 356
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=33.52 E-value=1.4e+02 Score=25.24 Aligned_cols=96 Identities=16% Similarity=0.110 Sum_probs=54.1
Q ss_pred EEeCcHH--HHHHHHHHhcCCCCEEEe-cCCC-CC----cHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEE
Q 016612 74 LCFTSGM--AALAAVTHLLGTGEEIVA-GDDL-YG----GTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWV 145 (386)
Q Consensus 74 i~~~~gt--~al~~~~~~~~~g~~Vlv-~~~~-~~----~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~ 145 (386)
+++++|+ -+-+++..+++.|..|.+ .+.. -. .....+ ......+++++..+..|.+.+.++++ ...+|+-
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~-~~l~~~~v~~v~~D~~d~~~l~~~~~-~~d~vi~ 82 (307)
T 2gas_A 5 ILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELI-DNYQSLGVILLEGDINDHETLVKAIK-QVDIVIC 82 (307)
T ss_dssp EEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHH-HHHHHTTCEEEECCTTCHHHHHHHHT-TCSEEEE
T ss_pred EEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHH-HHHHhCCCEEEEeCCCCHHHHHHHHh-CCCEEEE
Confidence 4455554 334455556666766543 3322 11 111111 11224678888889889999999887 4566654
Q ss_pred eCCCCCCcccccHHHHHHHHHHcC-CEEEE
Q 016612 146 ESPTNPRQQICDIRKIAEMAHAHG-ALLLV 174 (386)
Q Consensus 146 ~~~~nptG~~~~l~~i~~la~~~~-~~li~ 174 (386)
..... .+.....+.+.|++.| +--++
T Consensus 83 ~a~~~---~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 83 AAGRL---LIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp CSSSS---CGGGHHHHHHHHHHHCCCSEEE
T ss_pred CCccc---ccccHHHHHHHHHhcCCceEEe
Confidence 43221 1344577888898887 53333
No 357
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=33.43 E-value=1.3e+02 Score=24.89 Aligned_cols=74 Identities=16% Similarity=0.127 Sum_probs=41.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+++.|.+|++.+-.-....... .... ..+.....+..|.+++++.++ .+..++
T Consensus 13 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~-~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 13 RKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVV-AGLE-NGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTCT-TCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHh-cCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456777777666 455667888988876433211111111 1111 145666677778888777664 256666
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 91 v~~A 94 (263)
T 3ak4_A 91 CANA 94 (263)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 358
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=33.29 E-value=1.5e+02 Score=24.47 Aligned_cols=76 Identities=11% Similarity=0.139 Sum_probs=41.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCc-HHHHHhhhcc--cCCcEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-TDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~-~~~~~~~~~~--~~g~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.. .......+.. ...+.+...+..|.+++++.++ .+.
T Consensus 5 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 84 (260)
T 1x1t_A 5 KVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMGRI 84 (260)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 456777777666 3556677889888765433222 2111111111 1223444455568777776664 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 85 D~lv~~A 91 (260)
T 1x1t_A 85 DILVNNA 91 (260)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 6766543
No 359
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=33.16 E-value=1.3e+02 Score=25.17 Aligned_cols=72 Identities=11% Similarity=0.109 Sum_probs=42.8
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.- . ..... ..........+..|.+++++.++ .+..++
T Consensus 17 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~---~-~~~~~-~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 91 (266)
T 3p19_A 17 KLVVITGASSGIGEAIARRFSEEGHPLLLLARRV---E-RLKAL-NLPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAI 91 (266)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCH---H-HHHTT-CCTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCH---H-HHHHh-hcCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 467777777776 35566788888777643321 1 11222 23355666677778888776664 256666
Q ss_pred EEeCC
Q 016612 144 WVESP 148 (386)
Q Consensus 144 ~~~~~ 148 (386)
+-+..
T Consensus 92 vnnAg 96 (266)
T 3p19_A 92 VNNAG 96 (266)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65543
No 360
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=32.84 E-value=1.2e+02 Score=25.35 Aligned_cols=73 Identities=8% Similarity=0.121 Sum_probs=43.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-......... . ...+.+...+..|.+++++.+. .+..++
T Consensus 6 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 6 KVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAA-Y-PDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHH-C-TTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh-c-cCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 467788887666 45566888898887654433333221111 1 1245666667778887776654 256666
Q ss_pred EEe
Q 016612 144 WVE 146 (386)
Q Consensus 144 ~~~ 146 (386)
+-+
T Consensus 84 v~~ 86 (281)
T 3m1a_A 84 VNN 86 (281)
T ss_dssp EEC
T ss_pred EEC
Confidence 644
No 361
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=32.77 E-value=56 Score=27.75 Aligned_cols=97 Identities=12% Similarity=0.083 Sum_probs=53.1
Q ss_pred eEEeCcHHHHH--HHHHHhcCCC-CEEEe-cCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCC
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTG-EEIVA-GDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g-~~Vlv-~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~ 148 (386)
.+++++++..+ .++..+++.| ..|.+ .+..-.... ......+++++..+..|.+.+.+++. ....|+....
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~----~~l~~~~~~~~~~D~~d~~~l~~~~~-~~d~vi~~a~ 81 (299)
T 2wm3_A 7 LVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAA----KELRLQGAEVVQGDQDDQVIMELALN-GAYATFIVTN 81 (299)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHH----HHHHHTTCEEEECCTTCHHHHHHHHT-TCSEEEECCC
T ss_pred EEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHH----HHHHHCCCEEEEecCCCHHHHHHHHh-cCCEEEEeCC
Confidence 45566655443 4556666666 56653 332111111 11223578888888889999998886 4566664432
Q ss_pred CCCCcc----cccHHHHHHHHHHcCC-EEEE
Q 016612 149 TNPRQQ----ICDIRKIAEMAHAHGA-LLLV 174 (386)
Q Consensus 149 ~nptG~----~~~l~~i~~la~~~~~-~li~ 174 (386)
..+... +.-.+.+.+.|++.++ .+|.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~ 112 (299)
T 2wm3_A 82 YWESCSQEQEVKQGKLLADLARRLGLHYVVY 112 (299)
T ss_dssp HHHHTCHHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred CCccccchHHHHHHHHHHHHHHHcCCCEEEE
Confidence 110000 1124567788888776 3443
No 362
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=32.56 E-value=1.3e+02 Score=26.15 Aligned_cols=97 Identities=15% Similarity=0.139 Sum_probs=51.9
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhh---cc---cCCcEEEEeCCCCHHHHHhhhCCCceEEE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRV---TP---KTGVVVKRVNTCDLDEVASAIGPWTKLVW 144 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~---~~---~~g~~~~~v~~~d~~~l~~~~~~~~~~v~ 144 (386)
.+++++|+..+ +++..+++.|..|++..-.-......+... .. ..+++++..+..|.+++.+++. +..+|+
T Consensus 29 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vi 107 (352)
T 1sb8_A 29 VWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACA-GVDYVL 107 (352)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHT-TCSEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhc-CCCEEE
Confidence 45666665444 456667777887765432111111111111 11 2466777778889999988886 566666
Q ss_pred EeCCCCCCcc------------cccHHHHHHHHHHcCC
Q 016612 145 VESPTNPRQQ------------ICDIRKIAEMAHAHGA 170 (386)
Q Consensus 145 ~~~~~nptG~------------~~~l~~i~~la~~~~~ 170 (386)
-.......+. +.-...+.+.|++.++
T Consensus 108 h~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 145 (352)
T 1sb8_A 108 HQAALGSVPRSINDPITSNATNIDGFLNMLIAARDAKV 145 (352)
T ss_dssp ECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5433221110 0113567778877764
No 363
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=32.48 E-value=1.4e+02 Score=26.48 Aligned_cols=74 Identities=16% Similarity=0.125 Sum_probs=40.8
Q ss_pred EEeCcHHHHH--HHHHHhc-CCCCEEEecCCCCCc---------HHHH---Hhhhcc---cCC---cEEEEeCCCCHHHH
Q 016612 74 LCFTSGMAAL--AAVTHLL-GTGEEIVAGDDLYGG---------TDRL---LSRVTP---KTG---VVVKRVNTCDLDEV 132 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~-~~g~~Vlv~~~~~~~---------~~~~---~~~~~~---~~g---~~~~~v~~~d~~~l 132 (386)
+++++|+..+ +++..++ +.|..|++..-.-.. .... +..... ..+ ++++..+..|.+.+
T Consensus 5 vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~ 84 (397)
T 1gy8_A 5 VLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRNEDFL 84 (397)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTCHHHH
T ss_pred EEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCCHHHH
Confidence 5566665444 5666677 788887754321111 1111 111111 113 67777788899888
Q ss_pred HhhhC--CCceEEEEeC
Q 016612 133 ASAIG--PWTKLVWVES 147 (386)
Q Consensus 133 ~~~~~--~~~~~v~~~~ 147 (386)
.+++. .++.+|+-+.
T Consensus 85 ~~~~~~~~~~d~vih~A 101 (397)
T 1gy8_A 85 NGVFTRHGPIDAVVHMC 101 (397)
T ss_dssp HHHHHHSCCCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 88876 3367776543
No 364
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=32.15 E-value=1.5e+02 Score=24.93 Aligned_cols=74 Identities=18% Similarity=0.194 Sum_probs=43.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++.+-.-... ....+..+ +.....+..|.+++++.++ .+..
T Consensus 28 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (277)
T 4dqx_A 28 RVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAA----VRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVD 103 (277)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHH----HHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 467777777676 45566788898887654332211 12222222 4455566668887776664 2566
Q ss_pred EEEEeCCC
Q 016612 142 LVWVESPT 149 (386)
Q Consensus 142 ~v~~~~~~ 149 (386)
+++-+...
T Consensus 104 ~lv~nAg~ 111 (277)
T 4dqx_A 104 VLVNNAGF 111 (277)
T ss_dssp EEEECCCC
T ss_pred EEEECCCc
Confidence 76655433
No 365
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=32.12 E-value=1.2e+02 Score=25.02 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=42.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+++.|.+|++..-.-.........+ ...+.+...+..|.+++++.++ .+..++
T Consensus 13 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 13 LVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKL--GNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 456777777666 455667788888775433322222221111 1234555666668887776654 256666
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 91 i~~A 94 (265)
T 2o23_A 91 VNCA 94 (265)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 366
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=32.09 E-value=77 Score=27.94 Aligned_cols=69 Identities=12% Similarity=-0.032 Sum_probs=43.9
Q ss_pred hcCCCCEEEecCCCCCcH------HHHHhhhcccCCcEEEEeCCC-------------CHHHHHhhhC-CCceEEEEeCC
Q 016612 89 LLGTGEEIVAGDDLYGGT------DRLLSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (386)
Q Consensus 89 ~~~~g~~Vlv~~~~~~~~------~~~~~~~~~~~g~~~~~v~~~-------------d~~~l~~~~~-~~~~~v~~~~~ 148 (386)
.+++||+|-+..|+.+.. .....+.++..|.+++.-+.. -.++|.+++. +++++|+..-.
T Consensus 9 ~L~~GD~I~ivaPSs~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 88 (336)
T 3sr3_A 9 SLKYGDTIGIYSPSSPVTYTSPKRFERAKSYLLQKGFHILEGSLTGRYDYYRSGSIQERAKELNALIRNPNVSCIMSTIG 88 (336)
T ss_dssp CCCTTCEEEEECSSSCHHHHCHHHHHHHHHHHHHTTCEEEECTTTTCCBTTBSSCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCCCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEEcccccccccccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 478999999888877542 111234567799999876542 2456666654 68889887655
Q ss_pred CCCCccccc
Q 016612 149 TNPRQQICD 157 (386)
Q Consensus 149 ~nptG~~~~ 157 (386)
-.-+-.++|
T Consensus 89 G~g~~rlL~ 97 (336)
T 3sr3_A 89 GMNSNSLLP 97 (336)
T ss_dssp CSCGGGGGG
T ss_pred cccHHHHhh
Confidence 443444443
No 367
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=31.99 E-value=1.2e+02 Score=25.31 Aligned_cols=73 Identities=21% Similarity=0.176 Sum_probs=40.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC-----CCceEEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG-----PWTKLVW 144 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~-----~~~~~v~ 144 (386)
..+++++|+.+| .++..+++.|.+|++.+-.-.........+ ...+.+...+..|.+++++.++ .+...++
T Consensus 31 k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~--~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 31 ASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADEL--GNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--CTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHh--CCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 467777777766 455667888988876543322221111111 1234555566668777776554 2445555
Q ss_pred Ee
Q 016612 145 VE 146 (386)
Q Consensus 145 ~~ 146 (386)
.+
T Consensus 109 ~~ 110 (281)
T 3ppi_A 109 VA 110 (281)
T ss_dssp EC
T ss_pred Ec
Confidence 44
No 368
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=31.96 E-value=1.3e+02 Score=25.01 Aligned_cols=77 Identities=14% Similarity=0.083 Sum_probs=42.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc-cCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~-~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.........+.. ..+ +.....+..|.+++++.++ .+.
T Consensus 9 k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 88 (265)
T 3lf2_A 9 AVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLGCA 88 (265)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHCSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 466777777666 45566788898887654332222222222222 112 4455566668777776654 356
Q ss_pred eEEEEeCC
Q 016612 141 KLVWVESP 148 (386)
Q Consensus 141 ~~v~~~~~ 148 (386)
.+++-+..
T Consensus 89 d~lvnnAg 96 (265)
T 3lf2_A 89 SILVNNAG 96 (265)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 66665543
No 369
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=31.96 E-value=87 Score=26.18 Aligned_cols=74 Identities=18% Similarity=0.147 Sum_probs=42.0
Q ss_pred cCCC-ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe--CCCCHHHHHhhhCC-Cce
Q 016612 68 DKAD-RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIGP-WTK 141 (386)
Q Consensus 68 ~g~~-~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v--~~~d~~~l~~~~~~-~~~ 141 (386)
|..+ +..++|+|+.+| .....+.+.|-+|++.+-.-. .... ...+..|.+...+ +..|.+++++.+.. +..
T Consensus 5 f~L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~--~~~~-~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iD 81 (247)
T 4hp8_A 5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAP--DETL-DIIAKDGGNASALLIDFADPLAAKDSFTDAGFD 81 (247)
T ss_dssp TCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCC--HHHH-HHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCC
T ss_pred cCCCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcH--HHHH-HHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCC
Confidence 4444 577788888777 345668889988886543221 2222 3333455555444 44466666666653 445
Q ss_pred EEE
Q 016612 142 LVW 144 (386)
Q Consensus 142 ~v~ 144 (386)
+++
T Consensus 82 iLV 84 (247)
T 4hp8_A 82 ILV 84 (247)
T ss_dssp EEE
T ss_pred EEE
Confidence 444
No 370
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=31.89 E-value=1.3e+02 Score=25.49 Aligned_cols=76 Identities=16% Similarity=0.210 Sum_probs=41.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc------cCCcEEEEeCCCCHHHHHhhhCC-----
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP------KTGVVVKRVNTCDLDEVASAIGP----- 138 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~------~~g~~~~~v~~~d~~~l~~~~~~----- 138 (386)
..+++++|+.++ .++..+++.|.+|++..-.-.........+.. ...+.+...+..|.+++++.++.
T Consensus 19 k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 98 (303)
T 1yxm_A 19 QVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLDTF 98 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHHHc
Confidence 456777777666 45566778888887643322111111111111 12344555566688887776642
Q ss_pred -CceEEEEeC
Q 016612 139 -WTKLVWVES 147 (386)
Q Consensus 139 -~~~~v~~~~ 147 (386)
+..+++-+.
T Consensus 99 g~id~li~~A 108 (303)
T 1yxm_A 99 GKINFLVNNG 108 (303)
T ss_dssp SCCCEEEECC
T ss_pred CCCCEEEECC
Confidence 566776543
No 371
>2vt1_B Surface presentation of antigens protein SPAS; specificity switch, virulence, transmembrane, inner membrane, FLHB, YSCU, T3SS, plasmid; 2.00A {Shigella flexneri} SCOP: d.367.1.1
Probab=31.87 E-value=29 Score=24.18 Aligned_cols=21 Identities=14% Similarity=0.146 Sum_probs=18.5
Q ss_pred HHHHHHHHHHcCCEEEEeCCC
Q 016612 158 IRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~ 178 (386)
-++|.++|+++|++++.|-..
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (93)
T 2vt1_B 29 ALAVRKYANEVGIPTVRDVKL 49 (93)
T ss_dssp HHHHHHHHHHTTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCEEECHHH
Confidence 578999999999999998763
No 372
>1g94_A Alpha-amylase; beta-alpha-8-barrel, 3 domain structure, hydrolase; HET: DAF GLC; 1.74A {Pseudoalteromonas haloplanktis} SCOP: b.71.1.1 c.1.8.1 PDB: 1g9h_A* 1l0p_A 1aqm_A* 1aqh_A* 1b0i_A 1jd7_A 1jd9_A 1kxh_A*
Probab=31.87 E-value=25 Score=32.50 Aligned_cols=29 Identities=17% Similarity=0.192 Sum_probs=25.4
Q ss_pred CCCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
...|...+++++++.||++|+-||+|-++
T Consensus 59 p~~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 87 (448)
T 1g94_A 59 SRGGNRAQFIDMVNRCSAAGVDIYVDTLI 87 (448)
T ss_dssp BTTBCHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 34577778999999999999999999995
No 373
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=31.80 E-value=88 Score=22.72 Aligned_cols=90 Identities=14% Similarity=-0.018 Sum_probs=47.6
Q ss_pred CceEEeCcHHHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 71 DRALCFTSGMAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 71 ~~~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
...++++.|.-+...+..+.+.|..|.+.+..- . .. ..+...+..+...+..+.+.+.+.--.+..+++.+.+..
T Consensus 7 ~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~---~-~~-~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~ 81 (144)
T 2hmt_A 7 KQFAVIGLGRFGGSIVKELHRMGHEVLAVDINE---E-KV-NAYASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN 81 (144)
T ss_dssp CSEEEECCSHHHHHHHHHHHHTTCCCEEEESCH---H-HH-HTTTTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCH---H-HH-HHHHHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence 357778777766655555555565555443321 1 11 223344666655566677777764223566777665542
Q ss_pred CCcccccHHHHHHHHHHcC
Q 016612 151 PRQQICDIRKIAEMAHAHG 169 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~ 169 (386)
. ..-..+...+++.+
T Consensus 82 ~----~~~~~~~~~~~~~~ 96 (144)
T 2hmt_A 82 I----QASTLTTLLLKELD 96 (144)
T ss_dssp H----HHHHHHHHHHHHTT
T ss_pred h----HHHHHHHHHHHHcC
Confidence 1 11123555666554
No 374
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=31.57 E-value=49 Score=28.06 Aligned_cols=75 Identities=13% Similarity=0.147 Sum_probs=40.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCC-CCCcHHHHHhhhcccCCc--EEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDD-LYGGTDRLLSRVTPKTGV--VVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~-~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+++.|..|++..- .-....... ..+...+. .+...|..|.+++++.++ .+.
T Consensus 30 k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 108 (280)
T 4da9_A 30 PVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVI-AELSGLGARVIFLRADLADLSSHQATVDAVVAEFGRI 108 (280)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHH-HHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHSCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHH-HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 467777777776 355667888988876432 211111111 11222333 444445557766665554 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 109 D~lvnnA 115 (280)
T 4da9_A 109 DCLVNNA 115 (280)
T ss_dssp CEEEEEC
T ss_pred CEEEECC
Confidence 6666553
No 375
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=31.53 E-value=1.5e+02 Score=24.20 Aligned_cols=75 Identities=7% Similarity=0.084 Sum_probs=40.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCC-CCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-YGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~-~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.++ .++..+++.|.+|++..-. -......... .+..+ +.+...+..|.+++++.++ .+.
T Consensus 8 k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (258)
T 3afn_B 8 KRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIAS-MRADGGDAAFFAADLATSEACQQLVDEFVAKFGGI 86 (258)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHH-HHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSSC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHH-HHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 356777777665 4556677888887754322 2222211111 11223 3444455568777776664 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 87 d~vi~~A 93 (258)
T 3afn_B 87 DVLINNA 93 (258)
T ss_dssp SEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 376
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=31.43 E-value=1.1e+02 Score=27.28 Aligned_cols=47 Identities=17% Similarity=0.233 Sum_probs=27.5
Q ss_pred CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeC
Q 016612 128 DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 128 d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~ 176 (386)
+++++++.+.. ...+|.+.. +..|.+.+..+++++|+++|+.+++=.
T Consensus 244 ~~~~~~~~i~~~~~d~v~ik~--~~~GGit~~~~i~~~A~~~g~~~~~~~ 291 (368)
T 1sjd_A 244 SARAAADAIKLGAVQIVNIKP--GRVGGYLEARRVHDVCAAHGIPVWCGG 291 (368)
T ss_dssp SHHHHHHHHHTTCCSEEEECT--TTTTSHHHHHHHHHHHHHTTCCEEECC
T ss_pred CHHHHHHHHHcCCCCEEEecc--cccCCHHHHHHHHHHHHHcCCcEEeCC
Confidence 45555555532 344444432 235777777788888888887754433
No 377
>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}
Probab=31.38 E-value=1.8e+02 Score=24.96 Aligned_cols=92 Identities=10% Similarity=0.014 Sum_probs=49.9
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCC
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTN 150 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~n 150 (386)
.+++++|+..+ +++..+++.|.+|.+..-.-... .. ....+++++..+..|.+++.+++. +..+|+-.....
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~----~~-l~~~~~~~~~~Dl~d~~~~~~~~~-~~d~vih~a~~~ 88 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQI----QR-LAYLEPECRVAEMLDHAGLERALR-GLDGVIFSAGYY 88 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCG----GG-GGGGCCEEEECCTTCHHHHHHHTT-TCSEEEEC----
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhh----hh-hccCCeEEEEecCCCHHHHHHHHc-CCCEEEECCccC
Confidence 35666655444 55666777888776432211111 11 122367777888889999998886 466666443211
Q ss_pred CC--ccc--------ccHHHHHHHHHHcCC
Q 016612 151 PR--QQI--------CDIRKIAEMAHAHGA 170 (386)
Q Consensus 151 pt--G~~--------~~l~~i~~la~~~~~ 170 (386)
.. ... .-...+.+.|+++++
T Consensus 89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 118 (342)
T 2x4g_A 89 PSRPRRWQEEVASALGQTNPFYAACLQARV 118 (342)
T ss_dssp --------CHHHHHHHHHHHHHHHHHHHTC
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 10 000 013567888887764
No 378
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=31.30 E-value=1.2e+02 Score=24.86 Aligned_cols=75 Identities=12% Similarity=0.194 Sum_probs=40.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCC-CCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDD-LYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~-~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.++ .++..+.+.|.+|++..- .-....... ..++..+ +.....+..|.+++++.++ .+.
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 83 (246)
T 2uvd_A 5 KVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVV-DEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQV 83 (246)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHH-HHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 356777777666 355667788988876422 211111111 1111223 3444556668877776654 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 84 d~lv~nA 90 (246)
T 2uvd_A 84 DILVNNA 90 (246)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 379
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=31.29 E-value=84 Score=26.31 Aligned_cols=76 Identities=18% Similarity=0.202 Sum_probs=40.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|..|++..-.-.........+.+..+ +.....+..|.+++++.++ .+..
T Consensus 22 k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 101 (267)
T 1vl8_A 22 RVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGKLD 101 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 456777777666 45566778888887643322111111111101123 3444456668877776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 102 ~lvnnA 107 (267)
T 1vl8_A 102 TVVNAA 107 (267)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766543
No 380
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=31.24 E-value=1.6e+02 Score=24.63 Aligned_cols=74 Identities=15% Similarity=0.139 Sum_probs=41.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC-----cEEEEeCCCCHHHHHhhhC------C
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG-----VVVKRVNTCDLDEVASAIG------P 138 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g-----~~~~~v~~~d~~~l~~~~~------~ 138 (386)
..+++|+|+.+| .++..+++.|.+|++.+-.-.........+ +..+ +.+...|..|.+++++.++ .
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 90 (281)
T 3svt_A 12 RTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQEL-EALGANGGAIRYEPTDITNEDETARAVDAVTAWHG 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-HTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHH-HHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 467777777666 455667888988876543322222222222 2222 3444455568777776654 2
Q ss_pred CceEEEEe
Q 016612 139 WTKLVWVE 146 (386)
Q Consensus 139 ~~~~v~~~ 146 (386)
+...++-+
T Consensus 91 ~id~lv~n 98 (281)
T 3svt_A 91 RLHGVVHC 98 (281)
T ss_dssp CCCEEEEC
T ss_pred CCCEEEEC
Confidence 56666554
No 381
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=31.16 E-value=71 Score=28.10 Aligned_cols=68 Identities=13% Similarity=0.081 Sum_probs=43.6
Q ss_pred hcCCCCEEEecCCCCCcH---HHH---HhhhcccCCcEEEEeCCC-------------CHHHHHhhhC-CCceEEEEeCC
Q 016612 89 LLGTGEEIVAGDDLYGGT---DRL---LSRVTPKTGVVVKRVNTC-------------DLDEVASAIG-PWTKLVWVESP 148 (386)
Q Consensus 89 ~~~~g~~Vlv~~~~~~~~---~~~---~~~~~~~~g~~~~~v~~~-------------d~~~l~~~~~-~~~~~v~~~~~ 148 (386)
.+++||+|-+..|+.+.. ... ..+.++..|.+++.-+.. -.++|.+++. +++++|+..-.
T Consensus 8 ~L~~GD~I~ivaPS~~~~~~~~~~~~~~~~~L~~~G~~v~~~~~~~~~~~~~ag~d~~Ra~dL~~a~~Dp~i~aI~~~rG 87 (331)
T 4e5s_A 8 KLKKGDEIRVISPSCSLSIVSTENRRLAVKRLTELGFHVTFSTHAEEIDRFASSSISSRVQDLHEAFRDPNVKAILTTLG 87 (331)
T ss_dssp CCCTTCEEEEECSSSCGGGSCHHHHHHHHHHHHHTTCEEEECTTTTCCCTTSSCCHHHHHHHHHHHHHCTTEEEEEESCC
T ss_pred CCCCcCEEEEEeCCCCccccCHHHHHHHHHHHHhCCCEEEECCchhcccCccCCCHHHHHHHHHHHhhCCCCCEEEEccc
Confidence 478999998888876543 211 234567899999887642 2456666654 67889887654
Q ss_pred CCCCcccc
Q 016612 149 TNPRQQIC 156 (386)
Q Consensus 149 ~nptG~~~ 156 (386)
-.-+-.++
T Consensus 88 G~g~~rlL 95 (331)
T 4e5s_A 88 GYNSNGLL 95 (331)
T ss_dssp CSCGGGGG
T ss_pred cccHHHHH
Confidence 44344444
No 382
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=31.09 E-value=60 Score=26.62 Aligned_cols=75 Identities=17% Similarity=0.117 Sum_probs=40.5
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCceE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
.+++++|+.++ .++..+++.|..|++..-.-.........+.+..+ +.+...+..|.+++++.++ .+...
T Consensus 4 ~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (250)
T 2cfc_A 4 VAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAIDV 83 (250)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46677777665 45566778888877643322111111112212223 4455556668888777664 25667
Q ss_pred EEEeC
Q 016612 143 VWVES 147 (386)
Q Consensus 143 v~~~~ 147 (386)
++-+.
T Consensus 84 li~~A 88 (250)
T 2cfc_A 84 LVNNA 88 (250)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66553
No 383
>3t7y_A YOP proteins translocation protein U; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta; 2.10A {Chlamydia trachomatis} SCOP: d.367.1.0
Probab=31.00 E-value=28 Score=24.45 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=18.2
Q ss_pred HHHHHHHHHHcCCEEEEeCC
Q 016612 158 IRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a 177 (386)
-++|.++|+++|++++.|..
T Consensus 44 A~~I~~~A~e~gVPi~e~~~ 63 (97)
T 3t7y_A 44 AKRIIAEAEKYGVPIMRNVP 63 (97)
T ss_dssp HHHHHHHHHHHTCCEEECHH
T ss_pred HHHHHHHHHHcCCeEEECHH
Confidence 57899999999999999976
No 384
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=30.90 E-value=1.3e+02 Score=24.70 Aligned_cols=75 Identities=11% Similarity=0.086 Sum_probs=39.8
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc--CCcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.++ .++..+++.|.+|++..-.-.........+.+. ..+.+...+..|.+++++.++ .+..
T Consensus 15 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 94 (265)
T 1h5q_A 15 KTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGPIS 94 (265)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCSEE
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 456777777666 455667788877765432211222112222221 234555566668877776654 2455
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
.++-+
T Consensus 95 ~li~~ 99 (265)
T 1h5q_A 95 GLIAN 99 (265)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55544
No 385
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=30.82 E-value=91 Score=26.14 Aligned_cols=73 Identities=16% Similarity=0.106 Sum_probs=43.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-.......... .........+..|.+++++.++ .+..++
T Consensus 12 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 12 KVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASV--GRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHH--CTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHh--CCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467777777666 455667888988876554433333222222 2335566667778877776664 256666
Q ss_pred EEe
Q 016612 144 WVE 146 (386)
Q Consensus 144 ~~~ 146 (386)
+-+
T Consensus 90 v~n 92 (271)
T 3tzq_B 90 DNN 92 (271)
T ss_dssp EEC
T ss_pred EEC
Confidence 654
No 386
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=30.80 E-value=62 Score=27.47 Aligned_cols=6 Identities=17% Similarity=0.412 Sum_probs=3.1
Q ss_pred EEEEEc
Q 016612 211 GVLAVK 216 (386)
Q Consensus 211 G~i~~~ 216 (386)
|+++++
T Consensus 231 gvVVGS 236 (267)
T 3vnd_A 231 GAISGS 236 (267)
T ss_dssp EEEECH
T ss_pred EEEECH
Confidence 555553
No 387
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=30.68 E-value=1.3e+02 Score=25.26 Aligned_cols=76 Identities=17% Similarity=0.204 Sum_probs=40.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCC------------CCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhh
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL------------YGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASA 135 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~------------~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~ 135 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-. -...........+..+ +.....+..|.+++++.
T Consensus 12 k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~ 91 (277)
T 3tsc_A 12 RVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLRKV 91 (277)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHH
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHH
Confidence 467777777776 4556688889888764321 1111111111122233 34444555677777766
Q ss_pred hC------CCceEEEEeC
Q 016612 136 IG------PWTKLVWVES 147 (386)
Q Consensus 136 ~~------~~~~~v~~~~ 147 (386)
++ .+..+++-+.
T Consensus 92 ~~~~~~~~g~id~lvnnA 109 (277)
T 3tsc_A 92 VDDGVAALGRLDIIVANA 109 (277)
T ss_dssp HHHHHHHHSCCCEEEECC
T ss_pred HHHHHHHcCCCCEEEECC
Confidence 54 2566666553
No 388
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=30.59 E-value=1.4e+02 Score=25.50 Aligned_cols=76 Identities=18% Similarity=0.201 Sum_probs=43.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|..|++..-.-......... ++..+ +.+...|..|.+++++.++ .+..
T Consensus 32 k~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 110 (301)
T 3tjr_A 32 RAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNG-LRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGGVD 110 (301)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 467777777766 35566788898887654432222222111 22223 4445556668887776654 2566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 111 ~lvnnAg 117 (301)
T 3tjr_A 111 VVFSNAG 117 (301)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7665533
No 389
>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}
Probab=30.58 E-value=1.8e+02 Score=23.28 Aligned_cols=72 Identities=11% Similarity=-0.001 Sum_probs=41.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc-cCCcEEEEeCCCCHHHHHhhhC------CCceE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
..+++++|+.++ .++..+++.|..|++..-.-... ....+ ...+.+...+..|.+++++.++ .+..+
T Consensus 6 k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (234)
T 2ehd_A 6 GAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRL----QALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSA 81 (234)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 457788887666 45566788888887543321111 11111 1256667777778887776654 25666
Q ss_pred EEEeC
Q 016612 143 VWVES 147 (386)
Q Consensus 143 v~~~~ 147 (386)
++-+.
T Consensus 82 li~~A 86 (234)
T 2ehd_A 82 LVNNA 86 (234)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 390
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=30.53 E-value=1.9e+02 Score=25.43 Aligned_cols=87 Identities=10% Similarity=0.058 Sum_probs=47.9
Q ss_pred cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHH
Q 016612 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (386)
Q Consensus 90 ~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~ 167 (386)
+.+-+...+.+|..+.....+..+.+..++.+...+. .+..++++.+. ....+|.+... ..|.+.+..+++++|++
T Consensus 206 L~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~--~~GGit~~~~i~~~A~~ 283 (354)
T 3jva_A 206 LADYQIELVEQPVKRRDLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLM--KCGGIHEALKINQICET 283 (354)
T ss_dssp TTTSCEEEEECCSCTTCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHH--HHTSHHHHHHHHHHHHH
T ss_pred HHhcCCCEEECCCChhhHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECch--hcCCHHHHHHHHHHHHH
Confidence 3333334455554433222233344444555444333 25666666554 33455554322 24667778899999999
Q ss_pred cCCEEEEeCCC
Q 016612 168 HGALLLVDNSI 178 (386)
Q Consensus 168 ~~~~li~D~a~ 178 (386)
+|+.+.+-...
T Consensus 284 ~gi~~~~~~~~ 294 (354)
T 3jva_A 284 AGIECMIGCMA 294 (354)
T ss_dssp TTCEEEECCCT
T ss_pred cCCeEEecCCC
Confidence 99998875554
No 391
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=30.49 E-value=90 Score=23.44 Aligned_cols=41 Identities=22% Similarity=0.293 Sum_probs=27.5
Q ss_pred HHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 132 VASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
+++.+...++.+++.. |.. -+++.+.|+++|+.++-+.+.+
T Consensus 87 ~~~~~~~g~~~i~i~~-----~~~--~~~l~~~a~~~Gi~~igpnc~g 127 (145)
T 2duw_A 87 AQEAIAIGAKTLWLQL-----GVI--NEQAAVLAREAGLSVVMDRCPA 127 (145)
T ss_dssp HHHHHHHTCCEEECCT-----TCC--CHHHHHHHHTTTCEEECSCCHH
T ss_pred HHHHHHcCCCEEEEcC-----ChH--HHHHHHHHHHcCCEEEcCCeee
Confidence 3333444566766542 222 5889999999999999888753
No 392
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=30.44 E-value=97 Score=25.38 Aligned_cols=73 Identities=12% Similarity=0.130 Sum_probs=43.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC--CceEEEEe
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP--WTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~--~~~~v~~~ 146 (386)
..+++++|+.+| .++..+++.|.+|++..-.-......... . .....+...+..|.+++.+.++. +..+++-+
T Consensus 15 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~-~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ 91 (249)
T 3f9i_A 15 KTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNA-L-KDNYTIEVCNLANKEECSNLISKTSNLDILVCN 91 (249)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-H-CSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHH-h-ccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence 567888888776 35566788898887654432222211111 1 12455666677788888877652 56666544
No 393
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=30.41 E-value=52 Score=30.15 Aligned_cols=92 Identities=10% Similarity=0.080 Sum_probs=62.3
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC--CCHHHHHhhhCC-CceEEEEeCCCCCCccccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT--CDLDEVASAIGP-WTKLVWVESPTNPRQQICD 157 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~--~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~ 157 (386)
+++..+...+.+=+...+.+|....-...+..+.+...+++..-+. .+..++.+.+.. ...++.+... -.|.+.+
T Consensus 271 ~ai~~~~~~l~~~~i~~iEeP~~~~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~~--~~GGite 348 (427)
T 2pa6_A 271 ELLDYYKALVDEYPIVSIEDPFHEEDFEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLLKVN--QIGTLSE 348 (427)
T ss_dssp HHHHHHHHHHHHSCEEEEECCSCTTCHHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHH--HHCSHHH
T ss_pred HHHHHHHHHHhhCCCcEEEcCCChhhHHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEEccc--ccCCHHH
Confidence 5554444344444567899997765555555666666777765554 358888888763 4556654432 2588889
Q ss_pred HHHHHHHHHHcCCEEEE
Q 016612 158 IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 158 l~~i~~la~~~~~~li~ 174 (386)
..+++++|+++|+.+++
T Consensus 349 a~~ia~lA~~~g~~~~~ 365 (427)
T 2pa6_A 349 AVDAAQLAFRNGYGVVV 365 (427)
T ss_dssp HHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHcCCeEEE
Confidence 99999999999998876
No 394
>1jeo_A MJ1247, hypothetical protein MJ1247; RUMP pathway, phosphosugar, 3-hexulose-6-phosphate isomerase structural genomics; HET: CME CIT; 2.00A {Methanocaldococcus jannaschii} SCOP: c.80.1.3
Probab=30.33 E-value=1.8e+02 Score=22.23 Aligned_cols=82 Identities=15% Similarity=0.178 Sum_probs=44.8
Q ss_pred HHHHHHHhhcCCCceEEeCcHHHHHH---HHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhh
Q 016612 59 ALESLLAKLDKADRALCFTSGMAALA---AVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASA 135 (386)
Q Consensus 59 ~l~~~l~~~~g~~~~i~~~~gt~al~---~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~ 135 (386)
.+++....+...+..++++.|++... ....+..-|..+.+..+.+ ...
T Consensus 29 ~i~~~~~~i~~a~~I~i~G~G~S~~~A~~~~~~l~~~g~~~~~~~~~~-----------------------------~~~ 79 (180)
T 1jeo_A 29 KLDSLIDRIIKAKKIFIFGVGRSGYIGRCFAMRLMHLGFKSYFVGETT-----------------------------TPS 79 (180)
T ss_dssp HHHHHHHHHHHCSSEEEECCHHHHHHHHHHHHHHHHTTCCEEETTSTT-----------------------------CCC
T ss_pred HHHHHHHHHHhCCEEEEEeecHHHHHHHHHHHHHHHcCCeEEEeCCCc-----------------------------ccc
Confidence 34444444455668888888875432 2222333454444432110 012
Q ss_pred hCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 136 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 136 ~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
++++.-+|+++.. |...++.+..+.|+++|+.+|
T Consensus 80 ~~~~d~vi~iS~s----G~t~~~~~~~~~ak~~g~~vi 113 (180)
T 1jeo_A 80 YEKDDLLILISGS----GRTESVLTVAKKAKNINNNII 113 (180)
T ss_dssp CCTTCEEEEEESS----SCCHHHHHHHHHHHTTCSCEE
T ss_pred CCCCCEEEEEeCC----CCcHHHHHHHHHHHHCCCcEE
Confidence 3345556666653 555667788889999886554
No 395
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=30.19 E-value=1.9e+02 Score=23.44 Aligned_cols=76 Identities=9% Similarity=0.152 Sum_probs=41.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.++ .++..+.+.|.+|++....-...... ....+..+ +.....+..|.+++++.++ .+..
T Consensus 6 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (247)
T 3lyl_A 6 KVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKF-ENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAID 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCCS
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 457777777666 45566788898887654332222211 12222233 3444555667777776554 2566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
.++-+..
T Consensus 85 ~li~~Ag 91 (247)
T 3lyl_A 85 ILVNNAG 91 (247)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 6665533
No 396
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=30.12 E-value=1.2e+02 Score=25.10 Aligned_cols=94 Identities=10% Similarity=0.079 Sum_probs=51.8
Q ss_pred eEEeCcHHHHHHHHHHhcCCCCEEEecCCC----------CCcHHHHHhhhcccCCcEEEEeCCC-----CHHHHHhhhC
Q 016612 73 ALCFTSGMAALAAVTHLLGTGEEIVAGDDL----------YGGTDRLLSRVTPKTGVVVKRVNTC-----DLDEVASAIG 137 (386)
Q Consensus 73 ~i~~~~gt~al~~~~~~~~~g~~Vlv~~~~----------~~~~~~~~~~~~~~~g~~~~~v~~~-----d~~~l~~~~~ 137 (386)
.+.+++|-.+..++..+.+.|..|..-... |.......+.+++..|+++..++.. ..+++.+.+.
T Consensus 8 vvl~SGGkDSs~al~~l~~~G~eV~~L~~~~~~~~~s~~~h~~~~e~a~~~A~~LGIpl~~v~~~g~~~~e~e~l~~~l~ 87 (237)
T 3rjz_A 8 AVLYSGGKDSNYALYWAIKNRFSVKFLVTMVSENEESYMYHTINANLTDLQARALGIPLVKGFTQGEKEKEVEDLKRVLS 87 (237)
T ss_dssp EEECCSSHHHHHHHHHHHHTTCEEEEEEEEECC--------CCSSSHHHHHHHHHTCCEEEEEC------CHHHHHHHHT
T ss_pred EEEecCcHHHHHHHHHHHHcCCeEEEEEEEcCCCCCccccCCccHHHHHHHHHHcCCCEEEEECCCCchHHHHHHHHHHH
Confidence 566788885554444445567665311001 1111123356777888887777654 3566666665
Q ss_pred C-CceEEEEeCCCCCCcccc---cHHHHHHHHHHcCCEEE
Q 016612 138 P-WTKLVWVESPTNPRQQIC---DIRKIAEMAHAHGALLL 173 (386)
Q Consensus 138 ~-~~~~v~~~~~~nptG~~~---~l~~i~~la~~~~~~li 173 (386)
. ....++ +|.+. -...+-..|.+.|+..+
T Consensus 88 ~~~i~~vv-------~Gdi~s~yqr~r~e~vc~~~gl~~~ 120 (237)
T 3rjz_A 88 GLKIQGIV-------AGALASKYQRKRIEKVAKELGLEVY 120 (237)
T ss_dssp TSCCSEEE-------CC---CCSHHHHHHHHHHHTTCEEE
T ss_pred hcCCcEEE-------ECCcchHHHHHHHHHHHHHcCCEEE
Confidence 3 344554 45553 25778888988887554
No 397
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=30.11 E-value=2.1e+02 Score=23.37 Aligned_cols=122 Identities=11% Similarity=0.105 Sum_probs=56.5
Q ss_pred chHHHHHHHHHhhcCCCceEEeCcHHHHHHH-HHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCc--EEEEeCCCCHHH
Q 016612 55 PTRDALESLLAKLDKADRALCFTSGMAALAA-VTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGV--VVKRVNTCDLDE 131 (386)
Q Consensus 55 ~~~~~l~~~l~~~~g~~~~i~~~~gt~al~~-~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~--~~~~v~~~d~~~ 131 (386)
+....+-..+....+...++=+++|+..... +...+.++.+|+..+..-.... ..+..++..|. ++..+. .|..+
T Consensus 46 ~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~-~a~~~~~~~g~~~~i~~~~-gda~~ 123 (242)
T 3r3h_A 46 PEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTK-HAHPYWREAKQEHKIKLRL-GPALD 123 (242)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCC-CSHHHHHHTTCTTTEEEEE-SCHHH
T ss_pred HHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHH-HHHHHHHHcCCCCcEEEEE-cCHHH
Confidence 3444455555555666666666666644332 3334555666765443221110 00122223332 233333 34444
Q ss_pred HHhhh-----CCCceEEEEeCCCCCCccccc-HHHHHHHHHHcCCEEEEeCCCCCCC
Q 016612 132 VASAI-----GPWTKLVWVESPTNPRQQICD-IRKIAEMAHAHGALLLVDNSIMSPV 182 (386)
Q Consensus 132 l~~~~-----~~~~~~v~~~~~~nptG~~~~-l~~i~~la~~~~~~li~D~a~~~~~ 182 (386)
+...+ .....+|++..+. ..... ++.+.++.+ .|.++++|++...+.
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~~---~~~~~~l~~~~~~Lk-pGG~lv~d~~~~~g~ 176 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDADK---TNYLNYYELALKLVT-PKGLIAIDNIFWDGK 176 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESCG---GGHHHHHHHHHHHEE-EEEEEEEECSSSSSC
T ss_pred HHHHHhhccCCCCEeEEEEcCCh---HHhHHHHHHHHHhcC-CCeEEEEECCccCCc
Confidence 33333 3567888887541 11111 333333333 366777788765444
No 398
>3kts_A Glycerol uptake operon antiterminator regulatory; structural genomics, PSI-2, protein structur initiative; HET: UNL; 2.75A {Listeria monocytogenes str}
Probab=30.04 E-value=84 Score=25.15 Aligned_cols=43 Identities=9% Similarity=0.201 Sum_probs=34.0
Q ss_pred CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 127 CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 127 ~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
.+.++|+++++.+...+++-. |.+..++++.+.++++|-.+++
T Consensus 17 r~~~~l~~al~s~~~~ifll~-----g~i~~l~~~v~~lk~~~K~v~V 59 (192)
T 3kts_A 17 HNQKDMEKILELDLTYMVMLE-----THVAQLKALVKYAQAGGKKVLL 59 (192)
T ss_dssp SSSHHHHHHTTSSCCEEEECS-----EETTTHHHHHHHHHHTTCEEEE
T ss_pred cCHHHHHHHHcCCCCEEEEec-----CcHHHHHHHHHHHHHcCCeEEE
Confidence 488999999987777777643 6778899999999999765554
No 399
>3hvm_A Agmatine deiminase; hydrolase; 2.10A {Helicobacter pylori} SCOP: d.126.1.6 PDB: 2cmu_A
Probab=29.96 E-value=33 Score=30.24 Aligned_cols=51 Identities=16% Similarity=0.240 Sum_probs=37.5
Q ss_pred hHHHHHHHHHhhcCCCceEEeCcH------HHH-HHHHHHhcCCCCEEEe--cCCCCCcH
Q 016612 56 TRDALESLLAKLDKADRALCFTSG------MAA-LAAVTHLLGTGEEIVA--GDDLYGGT 106 (386)
Q Consensus 56 ~~~~l~~~l~~~~g~~~~i~~~~g------t~a-l~~~~~~~~~g~~Vlv--~~~~~~~~ 106 (386)
.++++++.|++++|.++.|-+..| |.+ +-.+.+++.||..++. .++..+.+
T Consensus 169 sk~eiE~~L~~~LGv~kviWL~~G~l~~DdTdgHID~larFv~p~~v~~~~~~d~~d~~y 228 (330)
T 3hvm_A 169 NQNGIETMLKKELGAKQVLWYSYGYLKGDDTDSHTDTLARFLDKDTIVYSACEDKNDEHY 228 (330)
T ss_dssp CHHHHHHHHHHHHCCSEEEEECCCCCTTCCSSCCGGGTEEEEETTEEEEEECCCTTSTTH
T ss_pred CHHHHHHHHHHHhCCCEEEEECCCCcCCCCCCccchheeEecCCCEEEEEcCCCCCCccH
Confidence 589999999999999999988877 444 4467778889765543 34554443
No 400
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=29.92 E-value=73 Score=28.06 Aligned_cols=96 Identities=10% Similarity=-0.013 Sum_probs=53.2
Q ss_pred eEEeCcHH--HHHHHHHHhcCC-CCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhhCCCceEEEEeCC
Q 016612 73 ALCFTSGM--AALAAVTHLLGT-GEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGPWTKLVWVESP 148 (386)
Q Consensus 73 ~i~~~~gt--~al~~~~~~~~~-g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~~~~~~v~~~~~ 148 (386)
-+++++|+ -+-+++..+++. |.+|.+..-.-... .......+++++..+.. |.+.+.+++. ++.+|+-...
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~----~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-~~d~Vih~A~ 100 (372)
T 3slg_A 26 KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRL----GDLVKHERMHFFEGDITINKEWVEYHVK-KCDVILPLVA 100 (372)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTT----GGGGGSTTEEEEECCTTTCHHHHHHHHH-HCSEEEECBC
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhh----hhhccCCCeEEEeCccCCCHHHHHHHhc-cCCEEEEcCc
Confidence 35555544 444556666665 77776433221111 13333467888888888 8888888776 4566664322
Q ss_pred -CCCCcc-----------cccHHHHHHHHHHcCCEEE
Q 016612 149 -TNPRQQ-----------ICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 149 -~nptG~-----------~~~l~~i~~la~~~~~~li 173 (386)
.++... +.-...+.+.|++.+..+|
T Consensus 101 ~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~v 137 (372)
T 3slg_A 101 IATPATYVKQPLRVFELDFEANLPIVRSAVKYGKHLV 137 (372)
T ss_dssp CCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHHTCEEE
T ss_pred cccHHHHhhCHHHHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 221110 0113567888887764444
No 401
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=29.83 E-value=1.2e+02 Score=26.12 Aligned_cols=76 Identities=16% Similarity=0.217 Sum_probs=41.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhccc-C--CcEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPK-T--GVVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~-~--g~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+++.|..|++..-.-.........+... . .+.+...|..|.+++.+.++ .+.
T Consensus 9 k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (319)
T 3ioy_A 9 RTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFGPV 88 (319)
T ss_dssp CEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTCCE
T ss_pred CEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCCCC
Confidence 356777777666 455667888988876543322222111111111 1 34555666678887776654 355
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 89 d~lv~nA 95 (319)
T 3ioy_A 89 SILCNNA 95 (319)
T ss_dssp EEEEECC
T ss_pred CEEEECC
Confidence 6665543
No 402
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=29.82 E-value=56 Score=30.14 Aligned_cols=94 Identities=15% Similarity=0.104 Sum_probs=62.9
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCC--CCHHHHHhhhC-CCceEEEEeCCCCCCccc
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNT--CDLDEVASAIG-PWTKLVWVESPTNPRQQI 155 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~--~d~~~l~~~~~-~~~~~v~~~~~~nptG~~ 155 (386)
+++..+..+.++=+...+.+|....-...+..+.+.. .+.+..-+. .+..++.+.+. ....+|.+.. +..|.+
T Consensus 283 eai~~~~~l~~~~~i~~iEePl~~~d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~ik~--~~~GGi 360 (444)
T 1w6t_A 283 EQIDYLEELVNKYPIITIEDGMDENDWDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANSILIKV--NQIGTL 360 (444)
T ss_dssp HHHHHHHHHHHHSCEEEEESCSCTTCHHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECH--HHHCSH
T ss_pred HHHHHHHHHHHhCCcEEEECCCChhhHHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCEEEEcc--cccCCH
Confidence 4555555554433467899998765555555555555 566665553 37888888876 3455665543 236888
Q ss_pred ccHHHHHHHHHHcCCEEEEeC
Q 016612 156 CDIRKIAEMAHAHGALLLVDN 176 (386)
Q Consensus 156 ~~l~~i~~la~~~~~~li~D~ 176 (386)
.+..+++++|+++|+.+++-.
T Consensus 361 tea~~ia~lA~~~g~~v~~~h 381 (444)
T 1w6t_A 361 TETFEAIEMAKEAGYTAVVSH 381 (444)
T ss_dssp HHHHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHHHCCCeEEecC
Confidence 999999999999999888743
No 403
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=29.77 E-value=1.4e+02 Score=25.06 Aligned_cols=76 Identities=11% Similarity=0.097 Sum_probs=40.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-..........++..+ +.+...+..|.+++++.++ .+..
T Consensus 30 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 109 (283)
T 1g0o_A 30 KVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGKLD 109 (283)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887776 35566788898887643221111111111122233 3444455567777766554 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 110 ~lv~~A 115 (283)
T 1g0o_A 110 IVCSNS 115 (283)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 404
>3c01_E Surface presentation of antigens protein SPAS; auto cleavage protein, flagella, ESCU, YSCU, intein, T3SS, M inner membrane, transmembrane; 2.60A {Salmonella typhimurium} SCOP: d.367.1.1
Probab=29.75 E-value=30 Score=24.33 Aligned_cols=21 Identities=19% Similarity=0.264 Sum_probs=18.4
Q ss_pred HHHHHHHHHHcCCEEEEeCCC
Q 016612 158 IRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 158 l~~i~~la~~~~~~li~D~a~ 178 (386)
-++|.++|+++|++++.|-..
T Consensus 29 A~~I~e~A~e~gVPi~e~~~L 49 (98)
T 3c01_E 29 ALAVRAYAEKVGVPVIVDIKL 49 (98)
T ss_dssp HHHHHHHHHHHTCCEEECHHH
T ss_pred HHHHHHHHHHcCCCeecCHHH
Confidence 578999999999999998763
No 405
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=29.71 E-value=1.4e+02 Score=23.10 Aligned_cols=35 Identities=14% Similarity=0.112 Sum_probs=23.1
Q ss_pred hCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 136 IGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 136 ~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
++++.-+|+++. +|...++.++.+.++++|+.+|.
T Consensus 85 ~~~~d~~i~iS~----sG~t~~~~~~~~~ak~~g~~vi~ 119 (187)
T 3sho_A 85 LRPTDLMIGVSV----WRYLRDTVAALAGAAERGVPTMA 119 (187)
T ss_dssp CCTTEEEEEECC----SSCCHHHHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEEE
Confidence 344555555544 46667788888999998875553
No 406
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=29.71 E-value=2.1e+02 Score=23.32 Aligned_cols=74 Identities=8% Similarity=0.091 Sum_probs=41.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-......... .. ........+..|.+++++.++ .+..++
T Consensus 10 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 10 KVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDY-LG-DNGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH-HG-GGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hc-ccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467777777666 45566888898887654332222111111 11 123455566668777776654 256666
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 88 v~nA 91 (248)
T 3op4_A 88 VNNA 91 (248)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 407
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=29.66 E-value=2.1e+02 Score=23.42 Aligned_cols=73 Identities=12% Similarity=0.167 Sum_probs=40.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEE--EEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVV--KRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~--~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|..|++..-.-. ......+ ...+.++ ...+..|.+++++.++ .+..
T Consensus 5 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 5 KTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDP--APALAEI-ARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHH-HTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHH-HhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 356777777666 455667788888876433221 2111222 2234334 3445558887777664 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 82 ~lv~~A 87 (255)
T 2q2v_A 82 ILVNNA 87 (255)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776553
No 408
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=29.64 E-value=1.6e+02 Score=24.45 Aligned_cols=69 Identities=6% Similarity=0.021 Sum_probs=42.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-. ......+.....+..|.+++++.++ .+..++
T Consensus 29 k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~--------~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 100 (260)
T 3un1_A 29 KVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIK--------PSADPDIHTVAGDISKPETADRIVREGIERFGRIDSL 100 (260)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCC--------CCSSTTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChh--------hcccCceEEEEccCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 567778777776 355667888988876443211 1122345666667778888776664 266777
Q ss_pred EEeCC
Q 016612 144 WVESP 148 (386)
Q Consensus 144 ~~~~~ 148 (386)
+-+..
T Consensus 101 v~nAg 105 (260)
T 3un1_A 101 VNNAG 105 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 65543
No 409
>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}
Probab=29.59 E-value=1.5e+02 Score=25.76 Aligned_cols=77 Identities=12% Similarity=0.135 Sum_probs=42.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCC-CCc---HHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-YGG---TDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------ 137 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~-~~~---~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------ 137 (386)
..+++|+|+.+| .++..+++.|.+|+...-. ... ....+.......+ +.+...|..|.+++++.++
T Consensus 6 k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~ 85 (324)
T 3u9l_A 6 KIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGED 85 (324)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHc
Confidence 457777777676 4556688899988753211 111 1111112222223 4555566668887777664
Q ss_pred CCceEEEEeCC
Q 016612 138 PWTKLVWVESP 148 (386)
Q Consensus 138 ~~~~~v~~~~~ 148 (386)
.+..+++-+..
T Consensus 86 g~iD~lVnnAG 96 (324)
T 3u9l_A 86 GRIDVLIHNAG 96 (324)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 25666664433
No 410
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=29.57 E-value=54 Score=27.87 Aligned_cols=71 Identities=14% Similarity=0.145 Sum_probs=41.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhCC--CceEEEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIGP--WTKLVWV 145 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~~--~~~~v~~ 145 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-... ....+..+ +.+...+..|.+++++.++. +..+++-
T Consensus 17 k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~ 92 (291)
T 3rd5_A 17 RTVVITGANSGLGAVTARELARRGATVIMAVRDTRKG----EAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLIN 92 (291)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEE
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHH----HHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEE
Confidence 456777777666 45566788898887654322111 23333333 34444555688888877653 5566554
Q ss_pred e
Q 016612 146 E 146 (386)
Q Consensus 146 ~ 146 (386)
+
T Consensus 93 n 93 (291)
T 3rd5_A 93 N 93 (291)
T ss_dssp C
T ss_pred C
Confidence 3
No 411
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=29.46 E-value=1.6e+02 Score=24.46 Aligned_cols=76 Identities=11% Similarity=0.155 Sum_probs=41.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC-CcE--EEEeCCCCHHHHHhhhC--CCceEEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT-GVV--VKRVNTCDLDEVASAIG--PWTKLVW 144 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~-g~~--~~~v~~~d~~~l~~~~~--~~~~~v~ 144 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-.........+.... +.. ....+..|.+++++.++ .+..+++
T Consensus 11 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~lv 90 (267)
T 3t4x_A 11 KTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDILI 90 (267)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCEEE
Confidence 467777777666 3556678889888765433222222222221111 233 34445557777776664 3566666
Q ss_pred EeC
Q 016612 145 VES 147 (386)
Q Consensus 145 ~~~ 147 (386)
-+.
T Consensus 91 ~nA 93 (267)
T 3t4x_A 91 NNL 93 (267)
T ss_dssp ECC
T ss_pred ECC
Confidence 553
No 412
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=29.44 E-value=68 Score=27.37 Aligned_cols=76 Identities=12% Similarity=0.048 Sum_probs=42.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCC-cHHHHHhhhcccCCcEEEEeC--CCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYG-GTDRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~-~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-. ..........+..+.++..+. ..|.+++++.++ .+.
T Consensus 50 k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 129 (294)
T 3r3s_A 50 RKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALGGL 129 (294)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 467777777666 455668888988876543211 111111223334455555554 447777666554 356
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 130 D~lv~nA 136 (294)
T 3r3s_A 130 DILALVA 136 (294)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 413
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=29.23 E-value=1.6e+02 Score=24.09 Aligned_cols=75 Identities=17% Similarity=0.206 Sum_probs=41.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.++ .++..+++.|.+|++..-.-......... ++..+ +.+...+..|.+++++.++ .+..
T Consensus 14 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 92 (260)
T 3awd_A 14 RVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVED-LRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRVD 92 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 456777777666 45566778888887654322111111111 12223 4555566668888777664 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 93 ~vi~~A 98 (260)
T 3awd_A 93 ILVACA 98 (260)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776553
No 414
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=29.18 E-value=1.8e+02 Score=25.96 Aligned_cols=111 Identities=8% Similarity=0.034 Sum_probs=67.7
Q ss_pred HHHHhhcCCCceEEe--CcH---HHHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhh
Q 016612 62 SLLAKLDKADRALCF--TSG---MAALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASA 135 (386)
Q Consensus 62 ~~l~~~~g~~~~i~~--~~g---t~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~ 135 (386)
+.+.+..|.+-.+.+ +++ .+++..+.. +.+-+...+.+|........+..+.+..++.+...+.. +++++++.
T Consensus 190 ~avr~a~G~d~~l~vD~n~~~~~~~a~~~~~~-l~~~~i~~iE~P~~~~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~ 268 (392)
T 2poz_A 190 KAVRDAAGPEIELMVDLSGGLTTDETIRFCRK-IGELDICFVEEPCDPFDNGALKVISEQIPLPIAVGERVYTRFGFRKI 268 (392)
T ss_dssp HHHHHHHCTTSEEEEECTTCSCHHHHHHHHHH-HGGGCEEEEECCSCTTCHHHHHHHHHHCSSCEEECTTCCHHHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCHHHHHHHHHH-HHhcCCCEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 334455676633333 222 144443333 44444557888865444444455555566666655543 67888888
Q ss_pred hCCC-ceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEe
Q 016612 136 IGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 136 ~~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D 175 (386)
+..+ ..+|.+. -+-.|.+.+..+++++|+++|+.++.=
T Consensus 269 i~~~~~d~v~ik--~~~~GGit~~~~i~~~A~~~g~~~~~h 307 (392)
T 2poz_A 269 FELQACGIIQPD--IGTAGGLMETKKICAMAEAYNMRVAPH 307 (392)
T ss_dssp HTTTCCSEECCC--TTTSSCHHHHHHHHHHHHTTTCEECCC
T ss_pred HHcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEecC
Confidence 8743 5555443 234688999999999999999988773
No 415
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=29.13 E-value=1e+02 Score=27.72 Aligned_cols=74 Identities=14% Similarity=0.116 Sum_probs=48.2
Q ss_pred EEecCCCCCcHHHHHhhhcccC-CcEEEEeCCCCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 96 IVAGDDLYGGTDRLLSRVTPKT-GVVVKRVNTCDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 96 Vlv~~~~~~~~~~~~~~~~~~~-g~~~~~v~~~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
..+.+|........+..+.+.. ++.+...+..+.+++++.+. ....+|.+. |.+.+..+++++|+++|+.++
T Consensus 221 ~~iEqP~~~~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik------GGit~a~~i~~~A~~~gi~~~ 294 (389)
T 2oz8_A 221 LWVEDPILRHDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH------GQVTDVMRIGWLAAELGIPIS 294 (389)
T ss_dssp SEEESCBCTTCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC------SCHHHHHHHHHHHHHHTCCEE
T ss_pred eEEeCCCCCcCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC------cCHHHHHHHHHHHHHcCCeEe
Confidence 3566665333333334444444 56665555336777777775 346677665 888888999999999998877
Q ss_pred Ee
Q 016612 174 VD 175 (386)
Q Consensus 174 ~D 175 (386)
+=
T Consensus 295 ~~ 296 (389)
T 2oz8_A 295 IG 296 (389)
T ss_dssp EC
T ss_pred ec
Confidence 75
No 416
>3ecs_A Translation initiation factor EIF-2B subunit alpha; eukaryotic translation initiation factor 2balpha (EIF2balpha); 2.65A {Homo sapiens}
Probab=28.95 E-value=2.9e+02 Score=24.01 Aligned_cols=97 Identities=13% Similarity=0.099 Sum_probs=54.2
Q ss_pred ceEEeCcHHH-HHHHHHHhcCCCC--EEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 72 RALCFTSGMA-ALAAVTHLLGTGE--EIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~-al~~~~~~~~~g~--~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+.|++-+.+. ++..+....+.|. +|++.+ |.+.+..- ..-+...|+++..+.......+.+ +...|++-
T Consensus 123 ~~ILTh~~S~tv~~~l~~A~~~gk~~~V~v~EsrP~~qG~~l--a~~L~~~gI~vtli~Dsa~~~~m~----~vd~VivG 196 (315)
T 3ecs_A 123 ATILTHAYSRVVLRVLEAAVAAKKRFSVYVTESQPDLSGKKM--AKALCHLNVPVTVVLDAAVGYIME----KADLVIVG 196 (315)
T ss_dssp EEEEECSCCHHHHHHHHHHHTTTCCEEEEEECCTTTTHHHHH--HHHHHTTTCCEEEECGGGHHHHGG----GCSEEEEE
T ss_pred CEEEEcCCcHHHHHHHHHHHHcCCeEEEEEecCCCcchHHHH--HHHHHHcCCCEEEEehhHHHHHHH----hCCEEEEC
Confidence 4566655543 3445555555453 455543 44444432 234557899988887433333333 45566553
Q ss_pred -CCCCCCccccc---HHHHHHHHHHcCCEEEE
Q 016612 147 -SPTNPRQQICD---IRKIAEMAHAHGALLLV 174 (386)
Q Consensus 147 -~~~nptG~~~~---l~~i~~la~~~~~~li~ 174 (386)
..-...|.+.. --.++-+|+.+++++++
T Consensus 197 Ad~i~~nG~v~nkiGT~~iAl~Ak~~~vP~~V 228 (315)
T 3ecs_A 197 AEGVVENGGIINKIGTNQMAVCAKAQNKPFYV 228 (315)
T ss_dssp CSEECTTSCEEEETTHHHHHHHHHHTTCCEEE
T ss_pred ceEEecCCCeeehhhhHHHHHHHHHhCCCEEE
Confidence 21223355543 35677788999998887
No 417
>1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2
Probab=28.93 E-value=1.3e+02 Score=25.70 Aligned_cols=75 Identities=15% Similarity=-0.007 Sum_probs=41.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecC-CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEe
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGD-DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~-~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~ 146 (386)
.-+++++|+..+ +++..+++.|..|++.. ..-......+.......+++++..+..|.+++.+.+.. ++.+|+-.
T Consensus 15 ~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~Vih~ 93 (335)
T 1rpn_A 15 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLRELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL 93 (335)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHHHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred CeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchhhccccCceEEEECCCCCHHHHHHHHHHcCCCEEEEC
Confidence 356677666554 45666777888776432 21111000111111234566777777788888887763 45666644
No 418
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=28.85 E-value=1.6e+02 Score=23.87 Aligned_cols=76 Identities=8% Similarity=0.070 Sum_probs=40.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc--cCCcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP--KTGVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~--~~g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.++ .++..+++.|.+|++..-.-.........+.. ...+.+...+..|.+++++.++ .+..
T Consensus 8 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 87 (248)
T 2pnf_A 8 KVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDGID 87 (248)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 456777777666 45566778888887643321111111111111 1234455556668887776664 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 88 ~vi~~A 93 (248)
T 2pnf_A 88 ILVNNA 93 (248)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776543
No 419
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=28.73 E-value=1.2e+02 Score=25.22 Aligned_cols=72 Identities=13% Similarity=0.095 Sum_probs=42.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-... ....+..+ +.+...+..|.+++++.++ .+..
T Consensus 28 k~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 103 (266)
T 3grp_A 28 RKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKL----KEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGID 103 (266)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 567788888776 35566788898887654332211 22222223 4444556668877776654 3566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 104 ~lvnnA 109 (266)
T 3grp_A 104 ILVNNA 109 (266)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 420
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=28.49 E-value=1.5e+02 Score=26.65 Aligned_cols=110 Identities=9% Similarity=-0.006 Sum_probs=67.1
Q ss_pred HHHHhhcCCCceEEe-C-cH-H--HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhh
Q 016612 62 SLLAKLDKADRALCF-T-SG-M--AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASA 135 (386)
Q Consensus 62 ~~l~~~~g~~~~i~~-~-~g-t--~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~ 135 (386)
+.+.+.+|.+-.+.+ . +| + +++..+. .+.+-+...+.+|..+.....+..+.+..++.+...+.. +++++++.
T Consensus 209 ~avR~a~G~d~~l~vDan~~~~~~~ai~~~~-~l~~~~i~~iE~P~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~ 287 (410)
T 2gl5_A 209 AAMREAMGDDADIIVEIHSLLGTNSAIQFAK-AIEKYRIFLYEEPIHPLNSDNMQKVSRSTTIPIATGERSYTRWGYREL 287 (410)
T ss_dssp HHHHHHHCSSSEEEEECTTCSCHHHHHHHHH-HHGGGCEEEEECSSCSSCHHHHHHHHHHCSSCEEECTTCCTTHHHHHH
T ss_pred HHHHHhcCCCCEEEEECCCCCCHHHHHHHHH-HHHhcCCCeEECCCChhhHHHHHHHHhhCCCCEEecCCcCCHHHHHHH
Confidence 334455676633333 2 22 1 3444333 344444557888865444444455555666766665543 77888888
Q ss_pred hCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 136 IGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 136 ~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
+.. ...+|.+. -+..|.+.+..+++++|+++|+.++.
T Consensus 288 i~~~~~d~v~ik--~~~~GGit~~~~ia~~A~~~gi~~~~ 325 (410)
T 2gl5_A 288 LEKQSIAVAQPD--LCLCGGITEGKKICDYANIYDTTVQV 325 (410)
T ss_dssp HHTTCCSEECCC--TTTTTHHHHHHHHHHHHHTTTCEECC
T ss_pred HHcCCCCEEecC--ccccCCHHHHHHHHHHHHHcCCeEee
Confidence 864 34555433 23468889999999999999988776
No 421
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=28.40 E-value=2.1e+02 Score=25.92 Aligned_cols=82 Identities=12% Similarity=0.050 Sum_probs=50.2
Q ss_pred CEEEecCC-CCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCC
Q 016612 94 EEIVAGDD-LYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGA 170 (386)
Q Consensus 94 ~~Vlv~~~-~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~ 170 (386)
+...+.+| ..+.....+..+.+..++.+..... .+..++++.+.. ...+|.+... ..|.+.+..+|+++|+++|+
T Consensus 240 ~i~~iEqP~~~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~--~~GGit~~~~ia~~A~~~gi 317 (410)
T 3dip_A 240 GVLWVEDPIAKMDNIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLT--WCGGLSEGRKIAALAETHAR 317 (410)
T ss_dssp TCSEEECCBSCTTCHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTT--TSSCHHHHHHHHHHHHHTTC
T ss_pred CCCEEECCCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeeccc--ccCCHHHHHHHHHHHHHcCC
Confidence 33466677 4433333334444555555555443 367777777753 4556554433 25888888999999999998
Q ss_pred EEEEeCC
Q 016612 171 LLLVDNS 177 (386)
Q Consensus 171 ~li~D~a 177 (386)
.+..-.+
T Consensus 318 ~~~~h~~ 324 (410)
T 3dip_A 318 PLAPHXT 324 (410)
T ss_dssp CEEECSS
T ss_pred EEeeeCc
Confidence 7765433
No 422
>3bh4_A Alpha-amylase; calcium, carbohydrate metabolism, glycosidase, hydrolase, metal-binding, secreted; 1.40A {Bacillus amyloliquefaciens} PDB: 1e43_A 1e3z_A* 1e40_A* 1e3x_A 1vjs_A 1ob0_A 1bli_A 1bpl_B 1bpl_A
Probab=28.34 E-value=37 Score=31.64 Aligned_cols=28 Identities=7% Similarity=0.080 Sum_probs=24.9
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
..|...+++++++.||++|+-||+|-+.
T Consensus 74 ~~Gt~~df~~lv~~aH~~Gi~VilD~V~ 101 (483)
T 3bh4_A 74 KYGTKSELQDAIGSLHSRNVQVYGDVVL 101 (483)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 3477778999999999999999999995
No 423
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=28.12 E-value=2.6e+02 Score=24.82 Aligned_cols=83 Identities=14% Similarity=0.087 Sum_probs=43.4
Q ss_pred cCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHH
Q 016612 90 LGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHA 167 (386)
Q Consensus 90 ~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~ 167 (386)
+.+-+...+.+|..+.....+..+.+..++.+...+. .+..++++.+.. ...+|.+. -+..|.+.+..+++++|++
T Consensus 220 l~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k--~~~~GGit~~~~ia~~A~~ 297 (372)
T 3tj4_A 220 AKDLDIYWFEEPLWYDDVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPD--VTRLGGITEYIQVADLALA 297 (372)
T ss_dssp TTTSCEEEEESCSCTTCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC--TTTTTHHHHHHHHHHHHHH
T ss_pred HhhcCCCEEECCCCchhHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeC--ccccCCHHHHHHHHHHHHH
Confidence 3333334455554432222223333344444433332 256666666543 33444322 2235777888899999999
Q ss_pred cCCEEEE
Q 016612 168 HGALLLV 174 (386)
Q Consensus 168 ~~~~li~ 174 (386)
+|+.+..
T Consensus 298 ~gi~~~~ 304 (372)
T 3tj4_A 298 HRLPVVP 304 (372)
T ss_dssp TTCCBCC
T ss_pred cCCEEEe
Confidence 9886653
No 424
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=28.10 E-value=1.3e+02 Score=25.72 Aligned_cols=92 Identities=14% Similarity=0.104 Sum_probs=50.2
Q ss_pred EEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEeCCCC
Q 016612 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVESPTN 150 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~~~~n 150 (386)
+++++|+..+ +++..+++.|..|++..-.-.... .... .+++++..+..|.+.+.+++.. +..+|+-.....
T Consensus 4 ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~d~vih~a~~~ 78 (330)
T 2c20_A 4 ILICGGAGYIGSHAVKKLVDEGLSVVVVDNLQTGHE----DAIT-EGAKFYNGDLRDKAFLRDVFTQENIEAVMHFAADS 78 (330)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCG----GGSC-TTSEEEECCTTCHHHHHHHHHHSCEEEEEECCCCC
T ss_pred EEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCcCch----hhcC-CCcEEEECCCCCHHHHHHHHhhcCCCEEEECCccc
Confidence 4555555444 456667777887765332111110 1111 2677777888899888887763 566666443222
Q ss_pred CCccc------------ccHHHHHHHHHHcCC
Q 016612 151 PRQQI------------CDIRKIAEMAHAHGA 170 (386)
Q Consensus 151 ptG~~------------~~l~~i~~la~~~~~ 170 (386)
..+.. .-...+.+.|++.++
T Consensus 79 ~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~ 110 (330)
T 2c20_A 79 LVGVSMEKPLQYYNNNVYGALCLLEVMDEFKV 110 (330)
T ss_dssp CHHHHHHSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred CccccccCHHHHHHHHhHHHHHHHHHHHHcCC
Confidence 11110 113457777887764
No 425
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=27.97 E-value=2.2e+02 Score=23.37 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=38.8
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-.... ...+..+ +.+...+..|.+++++.++ .+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 83 (257)
T 3tpc_A 8 RVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGE----EPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVH 83 (257)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC----------------CEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHH----HHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 456777777666 455667888988876543322221 2222222 4445556668777776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
.++-+.
T Consensus 84 ~lv~nA 89 (257)
T 3tpc_A 84 GLVNCA 89 (257)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 666543
No 426
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=27.92 E-value=2.6e+02 Score=23.24 Aligned_cols=74 Identities=14% Similarity=0.181 Sum_probs=40.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC-----CCceE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG-----PWTKL 142 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~-----~~~~~ 142 (386)
..+++|+|+.+| .++..+.+.|..|++.+.. ......... ....+.++.. .+..|.+++++... .+..+
T Consensus 32 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~-~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD~ 109 (273)
T 3uf0_A 32 RTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRT-DGVKEVADE-IADGGGSAEAVVADLADLEGAANVAEELAATRRVDV 109 (273)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESS-THHHHHHHH-HHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHH-HHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCcE
Confidence 567777777776 3556678889888765422 222222222 2234444444 45557776665532 35666
Q ss_pred EEEeC
Q 016612 143 VWVES 147 (386)
Q Consensus 143 v~~~~ 147 (386)
++-+.
T Consensus 110 lv~nA 114 (273)
T 3uf0_A 110 LVNNA 114 (273)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66553
No 427
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=27.84 E-value=69 Score=26.21 Aligned_cols=74 Identities=18% Similarity=0.159 Sum_probs=40.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.++ .++..+++.|.+|++. ...-....... ..++..+ +.+...+..|.+++++.++ .+.
T Consensus 6 ~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 84 (247)
T 2hq1_A 6 KTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATA-EEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGRI 84 (247)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHH-HHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSCC
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 356777777666 4556677888888764 32222221111 1122223 4445556668877776654 256
Q ss_pred eEEEEe
Q 016612 141 KLVWVE 146 (386)
Q Consensus 141 ~~v~~~ 146 (386)
..++-+
T Consensus 85 d~vi~~ 90 (247)
T 2hq1_A 85 DILVNN 90 (247)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 666544
No 428
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=27.83 E-value=1.5e+02 Score=24.86 Aligned_cols=76 Identities=18% Similarity=0.222 Sum_probs=40.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCC---------cHHHH--HhhhcccCCcE--EEEeCCCCHHHHHhhh
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYG---------GTDRL--LSRVTPKTGVV--VKRVNTCDLDEVASAI 136 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~---------~~~~~--~~~~~~~~g~~--~~~v~~~d~~~l~~~~ 136 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-. ..... .....+..+.+ ....+..|.+++++.+
T Consensus 11 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~ 90 (281)
T 3s55_A 11 KTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALESFV 90 (281)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHH
Confidence 467777777776 355667888988876433210 01111 11112233333 4444555777777665
Q ss_pred C------CCceEEEEeC
Q 016612 137 G------PWTKLVWVES 147 (386)
Q Consensus 137 ~------~~~~~v~~~~ 147 (386)
+ .+..+++-+.
T Consensus 91 ~~~~~~~g~id~lv~nA 107 (281)
T 3s55_A 91 AEAEDTLGGIDIAITNA 107 (281)
T ss_dssp HHHHHHHTCCCEEEECC
T ss_pred HHHHHhcCCCCEEEECC
Confidence 4 2566666543
No 429
>2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A*
Probab=27.82 E-value=1.9e+02 Score=24.46 Aligned_cols=68 Identities=26% Similarity=0.279 Sum_probs=38.9
Q ss_pred EEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCC-CceEEEEe
Q 016612 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~ 146 (386)
+++++|+..+ +++..+++.|.+|++.+-.-.... ... ..++++...+..|.+++++.++. +...|+-.
T Consensus 3 vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~----~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vi~~ 73 (311)
T 2p5y_A 3 VLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKR----ENV-PKGVPFFRVDLRDKEGVERAFREFRPTHVSHQ 73 (311)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCG----GGS-CTTCCEECCCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCch----hhc-ccCeEEEECCCCCHHHHHHHHHhcCCCEEEEC
Confidence 5566666544 456668888988876432111110 111 13456666677788888887752 45566543
No 430
>1mxg_A Alpha amylase; hyperthermostable, family 13 glycosyl hydrola (beta/alpha)8-barrel, hydrolase; HET: ACR ETE; 1.60A {Pyrococcus woesei} SCOP: b.71.1.1 c.1.8.1 PDB: 1mwo_A* 1mxd_A* 3qgv_A*
Probab=27.81 E-value=38 Score=31.09 Aligned_cols=28 Identities=21% Similarity=0.261 Sum_probs=24.8
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
..|...+++++++.||++|+-||+|-+.
T Consensus 82 ~~Gt~~df~~lv~~~H~~Gi~VilD~V~ 109 (435)
T 1mxg_A 82 RFGSKEELVRLIQTAHAYGIKVIADVVI 109 (435)
T ss_dssp SSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 3577778999999999999999999995
No 431
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=27.58 E-value=2.1e+02 Score=23.76 Aligned_cols=75 Identities=11% Similarity=0.077 Sum_probs=40.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCc-------HHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC---
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-------TDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG--- 137 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~-------~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~--- 137 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.. ..... ...+..+.++.. .+..|.+++++.++
T Consensus 7 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 85 (274)
T 3e03_A 7 KTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAA-AAVNAAGGQGLALKCDIREEDQVRAAVAATV 85 (274)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHH-HHHHHHTSEEEEEECCTTCHHHHHHHHHHHH
T ss_pred cEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHH-HHHHhcCCeEEEEeCCCCCHHHHHHHHHHHH
Confidence 466777777676 3556678888888754322211 11111 112223444444 45557777766654
Q ss_pred ---CCceEEEEeC
Q 016612 138 ---PWTKLVWVES 147 (386)
Q Consensus 138 ---~~~~~v~~~~ 147 (386)
.+..+++-+.
T Consensus 86 ~~~g~iD~lvnnA 98 (274)
T 3e03_A 86 DTFGGIDILVNNA 98 (274)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 3566666553
No 432
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=27.55 E-value=2e+02 Score=23.39 Aligned_cols=64 Identities=13% Similarity=0.092 Sum_probs=34.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCCcEEEE--eCCCCHHHHHhhh
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTGVVVKR--VNTCDLDEVASAI 136 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~ 136 (386)
..+++|+|+.+| .++..+++.|..|++. ...-....... ...+..+.++.. .+..|.+++++.+
T Consensus 8 k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~ 76 (255)
T 3icc_A 8 KVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETV-YEIQSNGGSAFSIGANLESLHGVEALY 76 (255)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHH-HHHHHTTCEEEEEECCTTSHHHHHHHH
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHH-HHHHhcCCceEEEecCcCCHHHHHHHH
Confidence 467778777666 4556678889888763 33222222221 222233444444 4455666665544
No 433
>1ud2_A Amylase, alpha-amylase; calcium-free, alkaline, hydrolase; 2.13A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1ud4_A 1ud5_A 1ud6_A 1ud8_A 1ud3_A
Probab=27.48 E-value=38 Score=31.49 Aligned_cols=27 Identities=4% Similarity=-0.009 Sum_probs=24.5
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
.|...+++++++.||++|+-||+|-+.
T Consensus 77 ~Gt~~df~~lv~~aH~~Gi~VilD~V~ 103 (480)
T 1ud2_A 77 YGTKAQLERAIGSLKSNDINVYGDVVM 103 (480)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEcc
Confidence 577778999999999999999999995
No 434
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=27.47 E-value=1.3e+02 Score=24.86 Aligned_cols=74 Identities=14% Similarity=0.104 Sum_probs=39.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCC-CCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDD-LYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~-~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.++ .++..+++.|.+|++..- .-....... ..++..+ +.+...+..|.+++++.++ .+.
T Consensus 22 k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~-~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 100 (274)
T 1ja9_A 22 KVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVV-AELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGGL 100 (274)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCE
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHH-HHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 467777777666 455667888888775432 211111111 1112223 3445556668887776664 255
Q ss_pred eEEEEe
Q 016612 141 KLVWVE 146 (386)
Q Consensus 141 ~~v~~~ 146 (386)
..++-+
T Consensus 101 d~vi~~ 106 (274)
T 1ja9_A 101 DFVMSN 106 (274)
T ss_dssp EEEECC
T ss_pred CEEEEC
Confidence 666533
No 435
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=27.40 E-value=2.1e+02 Score=24.03 Aligned_cols=77 Identities=12% Similarity=0.132 Sum_probs=41.8
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCC-------cHHHHHhhhcccCCcEEEEe--CCCCHHHHHhhhC---
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYG-------GTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG--- 137 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~-------~~~~~~~~~~~~~g~~~~~v--~~~d~~~l~~~~~--- 137 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-. ...... ...+..+.++..+ +..|.+++++.++
T Consensus 10 k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 88 (285)
T 3sc4_A 10 KTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAA-KEIEEAGGQALPIVGDIRDGDAVAAAVAKTV 88 (285)
T ss_dssp CEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHH-HHHHHHTSEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 466777777666 455668888988875433221 111111 1122234444444 5557777776654
Q ss_pred ---CCceEEEEeCCC
Q 016612 138 ---PWTKLVWVESPT 149 (386)
Q Consensus 138 ---~~~~~v~~~~~~ 149 (386)
.+...++-+...
T Consensus 89 ~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 89 EQFGGIDICVNNASA 103 (285)
T ss_dssp HHHSCCSEEEECCCC
T ss_pred HHcCCCCEEEECCCC
Confidence 366777655433
No 436
>1k4i_A 3,4-dihydroxy-2-butanone 4-phosphate synthase; riboflavin biosynthesi antimicrobial target, structure-based design, isomerase; 0.98A {Magnaporthe grisea} SCOP: d.115.1.2 PDB: 1k49_A 1k4l_A 1k4o_A 1k4p_A
Probab=27.38 E-value=99 Score=25.52 Aligned_cols=42 Identities=12% Similarity=0.041 Sum_probs=30.9
Q ss_pred HHhhhCCCceEEEEeCCCCC-----------CcccccHHHHHHHHHHcCCEEEE
Q 016612 132 VASAIGPWTKLVWVESPTNP-----------RQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 132 l~~~~~~~~~~v~~~~~~np-----------tG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.++..-.+..++.+-. |. .|....+.++.++|++||+.++.
T Consensus 160 LarLAGl~PagVicEi~-~~~~~~~~~~~~~dG~mar~~~l~~fA~~h~L~iit 212 (233)
T 1k4i_A 160 LCRLAGKRPVAVISEIV-DDGQEVEGRAVRAAPGMLRGDECVAFARRWGLKVCT 212 (233)
T ss_dssp HHHHTTCCSBEEEEEBE-ECCEECTTSSCEESCEECCHHHHHHHHHHTTCEEEE
T ss_pred HHHHcCCCceEEEEEeC-CCcccccccccCCCCCcCCHHHHHHHHHHcCCcEEE
Confidence 44444445667766544 44 68889999999999999998874
No 437
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=27.32 E-value=2.2e+02 Score=23.95 Aligned_cols=65 Identities=22% Similarity=0.254 Sum_probs=37.3
Q ss_pred EEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 74 LCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+++++|+..+ +++..+++.|..|++..-.-... ......++++...+..|.+ +.+.+.. .+|+-.
T Consensus 3 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~-----~~~~~~~~~~~~~Dl~d~~-~~~~~~~--d~vih~ 69 (312)
T 3ko8_A 3 IVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGR-----REFVNPSAELHVRDLKDYS-WGAGIKG--DVVFHF 69 (312)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCC-----GGGSCTTSEEECCCTTSTT-TTTTCCC--SEEEEC
T ss_pred EEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCc-----hhhcCCCceEEECccccHH-HHhhcCC--CEEEEC
Confidence 5566665444 56666778888887544322111 1112456677777777777 7776664 555543
No 438
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=27.32 E-value=1.2e+02 Score=24.69 Aligned_cols=76 Identities=9% Similarity=0.128 Sum_probs=41.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc-cCCcEEEEeCCCCHHHHHhhhC------CCceE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP-KTGVVVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~-~~g~~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
..+++++|+.++ .++..+++.|.+|++..-.-.........+.. ...+.+...+..|.+++++.++ .+...
T Consensus 12 ~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 91 (255)
T 1fmc_A 12 KCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKVDI 91 (255)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSCCE
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 457777777666 45666888898887644322111111111111 1234445556668887777654 25667
Q ss_pred EEEeC
Q 016612 143 VWVES 147 (386)
Q Consensus 143 v~~~~ 147 (386)
++-+.
T Consensus 92 vi~~A 96 (255)
T 1fmc_A 92 LVNNA 96 (255)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66543
No 439
>1hvx_A Alpha-amylase; hydrolase, glycosyltransferase, thermostability; 2.00A {Geobacillus stearothermophilus} SCOP: b.71.1.1 c.1.8.1
Probab=27.24 E-value=39 Score=31.85 Aligned_cols=27 Identities=19% Similarity=0.165 Sum_probs=24.6
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
.|...+++++++.||++|+-||+|-+.
T Consensus 78 ~Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 104 (515)
T 1hvx_A 78 YGTKAQYLQAIQAAHAAGMQVYADVVF 104 (515)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 477778999999999999999999995
No 440
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=27.23 E-value=1.4e+02 Score=24.18 Aligned_cols=74 Identities=9% Similarity=0.087 Sum_probs=39.3
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEec-CCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAG-DDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~-~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
.+++++|+.++ .++..+++.|..|++. ...-....... ...+..+ +.+...+..|.+++++.++ .+..
T Consensus 3 ~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 81 (244)
T 1edo_A 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVS-KQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTID 81 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCS
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH-HHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46777777666 4556678888888762 32211111111 1111223 3344455568777776664 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 82 ~li~~A 87 (244)
T 1edo_A 82 VVVNNA 87 (244)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 776543
No 441
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=27.21 E-value=1.5e+02 Score=26.26 Aligned_cols=64 Identities=9% Similarity=0.070 Sum_probs=41.6
Q ss_pred hhcccCCcEEEEeCC-CCHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 112 RVTPKTGVVVKRVNT-CDLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 112 ~~~~~~g~~~~~v~~-~d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
.+.+..++.+...+. .+..++++.+.. ...+|.+... -.|.+.+..+++++|+++|+.+..-..
T Consensus 229 ~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~--~~GGit~~~~i~~~A~~~gi~~~~~~~ 294 (368)
T 3q45_A 229 KIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLS--KSAGITNALNIIRLAEQAHMPVQVGGF 294 (368)
T ss_dssp HHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTT--TTTSHHHHHHHHHHHHHTTCCEEECCS
T ss_pred HHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechh--hcCCHHHHHHHHHHHHHcCCcEEecCc
Confidence 334444555444433 267777777653 4556555432 368888899999999999998887543
No 442
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=27.16 E-value=2.2e+02 Score=25.48 Aligned_cols=98 Identities=10% Similarity=0.027 Sum_probs=50.9
Q ss_pred eEEeCcHHHHH--HHHHHhcCCC-CEEEecCCCCCcHHHHHhhhcc-----cCCcEEEEeCCCCHHHHHhhhC-CCceEE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTG-EEIVAGDDLYGGTDRLLSRVTP-----KTGVVVKRVNTCDLDEVASAIG-PWTKLV 143 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g-~~Vlv~~~~~~~~~~~~~~~~~-----~~g~~~~~v~~~d~~~l~~~~~-~~~~~v 143 (386)
.+++++|+..+ +++..+++.| ..|++.+-.-.........+.. ..+++++..+..|.+.+...+. .++..|
T Consensus 37 ~vLVTGatG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~D~V 116 (399)
T 3nzo_A 37 RFLVLGGAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQYDYV 116 (399)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCCSEE
T ss_pred EEEEEcCChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCCCEE
Confidence 45566655444 5666688888 5776554332222111111111 1345555556668877776654 467777
Q ss_pred EEeCCCCCCccc-cc-------------HHHHHHHHHHcCC
Q 016612 144 WVESPTNPRQQI-CD-------------IRKIAEMAHAHGA 170 (386)
Q Consensus 144 ~~~~~~nptG~~-~~-------------l~~i~~la~~~~~ 170 (386)
+-.......... .+ ...+.+.|+++++
T Consensus 117 ih~Aa~~~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~~gv 157 (399)
T 3nzo_A 117 LNLSALKHVRSEKDPFTLMRMIDVNVFNTDKTIQQSIDAGA 157 (399)
T ss_dssp EECCCCCCGGGGSSHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred EECCCcCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 654322111111 11 2457888888774
No 443
>1wpc_A Glucan 1,4-alpha-maltohexaosidase; maltohexaose-producing amylase, alpha-amylase, acarbose, HYD; HET: ACI GLC GAL; 1.90A {Bacillus SP} SCOP: b.71.1.1 c.1.8.1 PDB: 1wp6_A* 2d3l_A* 2d3n_A* 2die_A 2gjp_A* 2gjr_A 1w9x_A*
Probab=27.14 E-value=39 Score=31.47 Aligned_cols=27 Identities=7% Similarity=0.058 Sum_probs=24.4
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
.|...+++++++.||++|+-||+|-+.
T Consensus 79 ~Gt~~df~~Lv~~aH~~Gi~VilD~V~ 105 (485)
T 1wpc_A 79 YGTRSQLQAAVTSLKNNGIQVYGDVVM 105 (485)
T ss_dssp SCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 567778999999999999999999995
No 444
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=27.05 E-value=2.1e+02 Score=23.69 Aligned_cols=65 Identities=12% Similarity=-0.026 Sum_probs=41.5
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
.+++|+++..| .++..+++.|.+|++..-.-. -....++++...+..|.+++++.+. +..+|+-+
T Consensus 5 ~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~--------~~~~~~~~~~~~Dl~d~~~~~~~~~-~~D~vi~~ 71 (267)
T 3rft_A 5 RLLVTGAAGQLGRVMRERLAPMAEILRLADLSPL--------DPAGPNEECVQCDLADANAVNAMVA-GCDGIVHL 71 (267)
T ss_dssp EEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCC--------CCCCTTEEEEECCTTCHHHHHHHHT-TCSEEEEC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCc--------cccCCCCEEEEcCCCCHHHHHHHHc-CCCEEEEC
Confidence 46677776665 455667788887775432211 0113456777777789999998887 56676644
No 445
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=27.04 E-value=58 Score=27.73 Aligned_cols=75 Identities=13% Similarity=0.137 Sum_probs=41.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCH-HHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDL-DEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~-~~l~~~~~------~~~ 140 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-.........+.+.. .+.+...+..|. +.+++..+ .+.
T Consensus 13 k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~g~i 92 (311)
T 3o26_A 13 RCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHFGKL 92 (311)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHHSSC
T ss_pred cEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhCCCC
Confidence 467778777776 4556677889888765433222222222333333 244555566576 55554443 356
Q ss_pred eEEEEe
Q 016612 141 KLVWVE 146 (386)
Q Consensus 141 ~~v~~~ 146 (386)
.+++-+
T Consensus 93 D~lv~n 98 (311)
T 3o26_A 93 DILVNN 98 (311)
T ss_dssp CEEEEC
T ss_pred CEEEEC
Confidence 666644
No 446
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=27.03 E-value=1.7e+02 Score=23.93 Aligned_cols=75 Identities=9% Similarity=0.084 Sum_probs=39.8
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCC-CCCcHHHHHhhhcccCCcE--EEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDD-LYGGTDRLLSRVTPKTGVV--VKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~-~~~~~~~~~~~~~~~~g~~--~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.++ .++..+++.|.+|++..- .-....... ..++..+.+ +...+..|.+++.+.++ .+.
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~-~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 86 (261)
T 1gee_A 8 KVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVL-EEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGKL 86 (261)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH-HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHH-HHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 457777777666 455667788888875432 211111111 112222333 44445567777776654 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
..++-+.
T Consensus 87 d~li~~A 93 (261)
T 1gee_A 87 DVMINNA 93 (261)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6776553
No 447
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=27.01 E-value=2.3e+02 Score=24.03 Aligned_cols=78 Identities=13% Similarity=0.104 Sum_probs=47.4
Q ss_pred EEecCCCCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 96 IVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 96 Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|++....|.+...-+..+.+..++++..-+. .|+.++.++..-...+|++....- .-..++++.+.|++.|+-+++
T Consensus 98 Vltd~~~f~Gs~~~L~~ir~~v~lPVl~Kdfi~d~~qi~ea~~~GAD~VlLi~a~L---~~~~l~~l~~~a~~lGl~~lv 174 (272)
T 3tsm_A 98 VLTDTPSFQGAPEFLTAARQACSLPALRKDFLFDPYQVYEARSWGADCILIIMASV---DDDLAKELEDTAFALGMDALI 174 (272)
T ss_dssp EECCSTTTCCCHHHHHHHHHTSSSCEEEESCCCSTHHHHHHHHTTCSEEEEETTTS---CHHHHHHHHHHHHHTTCEEEE
T ss_pred EeccccccCCCHHHHHHHHHhcCCCEEECCccCCHHHHHHHHHcCCCEEEEccccc---CHHHHHHHHHHHHHcCCeEEE
Confidence 4444444445544445555555666544443 366677776666667777664321 113478899999999988887
Q ss_pred eC
Q 016612 175 DN 176 (386)
Q Consensus 175 D~ 176 (386)
|-
T Consensus 175 ev 176 (272)
T 3tsm_A 175 EV 176 (272)
T ss_dssp EE
T ss_pred Ee
Confidence 65
No 448
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=26.91 E-value=2e+02 Score=23.73 Aligned_cols=74 Identities=11% Similarity=0.166 Sum_probs=40.7
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+++.|.+|++..-.-......... .. ..+.+...+..|.+++++.++ .+..++
T Consensus 8 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 8 KVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAE-LA-DAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-TG-GGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-hh-cCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456777777666 45566778898887643221111111111 11 124555666678888777664 256676
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 86 v~~A 89 (260)
T 1nff_A 86 VNNA 89 (260)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 449
>2ya0_A Putative alkaline amylopullulanase; hydrolase, glycoside hydrolase; 1.85A {Streptococcus pneumoniae} PDB: 2ya2_A*
Probab=26.76 E-value=31 Score=34.16 Aligned_cols=29 Identities=17% Similarity=0.375 Sum_probs=23.9
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
|++...+++++++.||++|+-||+|-++-
T Consensus 250 ~~~~~~efk~lV~~~H~~Gi~VilDvV~N 278 (714)
T 2ya0_A 250 PEKRIAEFKNLINEIHKRGMGAILDVVYN 278 (714)
T ss_dssp TTHHHHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred ccchHHHHHHHHHHHHHCCCEEEEEeccC
Confidence 33345679999999999999999999963
No 450
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=26.60 E-value=2.5e+02 Score=22.57 Aligned_cols=71 Identities=20% Similarity=0.211 Sum_probs=42.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhc-ccCCcEEEEeCCCCHHHHHhhhCC--CceEEEEe
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIGP--WTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~d~~~l~~~~~~--~~~~v~~~ 146 (386)
..+++++|+.++ .++..+++.|.+|++..-.-... .... +..+.++...+..|.+++++.++. +..+++-+
T Consensus 8 k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 3d3w_A 8 RRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADL----DSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNN 83 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEEC
T ss_pred cEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEEC
Confidence 456677777665 45566778888887643221111 1111 123567777777899999888863 45666544
No 451
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=26.57 E-value=2.1e+02 Score=25.80 Aligned_cols=94 Identities=13% Similarity=0.111 Sum_probs=46.6
Q ss_pred eEEeCcHHHHHHHHHHhcCCCC---EEEecCCCCCcHHHHHhhhccc--CCcEEEEeCCCCHHHHHhhhCC-CceEEEEe
Q 016612 73 ALCFTSGMAALAAVTHLLGTGE---EIVAGDDLYGGTDRLLSRVTPK--TGVVVKRVNTCDLDEVASAIGP-WTKLVWVE 146 (386)
Q Consensus 73 ~i~~~~gt~al~~~~~~~~~g~---~Vlv~~~~~~~~~~~~~~~~~~--~g~~~~~v~~~d~~~l~~~~~~-~~~~v~~~ 146 (386)
.++++.|.-+-.++..+.+.|+ .|.+.+..-.........+... ..+....++..|.+++++.+.. +..+|+.+
T Consensus 4 VlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin~ 83 (405)
T 4ina_A 4 VLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLNI 83 (405)
T ss_dssp EEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred EEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEEC
Confidence 4556555433344455666664 5655433221111111111111 1356667777788888877763 46666654
Q ss_pred CCCCCCcccccHHHHHHHHHHcCCEE
Q 016612 147 SPTNPRQQICDIRKIAEMAHAHGALL 172 (386)
Q Consensus 147 ~~~nptG~~~~l~~i~~la~~~~~~l 172 (386)
.+.. . -..+.+.|.+.|..+
T Consensus 84 ag~~-----~-~~~v~~a~l~~g~~v 103 (405)
T 4ina_A 84 ALPY-----Q-DLTIMEACLRTGVPY 103 (405)
T ss_dssp SCGG-----G-HHHHHHHHHHHTCCE
T ss_pred CCcc-----c-ChHHHHHHHHhCCCE
Confidence 4321 1 245556666666653
No 452
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=26.56 E-value=1.2e+02 Score=25.38 Aligned_cols=76 Identities=9% Similarity=0.016 Sum_probs=41.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.++ .++..+++.|..|++..-.-......... ++.. .+.+...+..|.+++++.++ .+..
T Consensus 32 k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD 110 (272)
T 1yb1_A 32 EIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAK-CKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDVS 110 (272)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCCS
T ss_pred CEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHH-HHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCCc
Confidence 456777777666 45566778888887644322111111111 1122 34555566668777776654 2566
Q ss_pred EEEEeCC
Q 016612 142 LVWVESP 148 (386)
Q Consensus 142 ~v~~~~~ 148 (386)
+++-+..
T Consensus 111 ~li~~Ag 117 (272)
T 1yb1_A 111 ILVNNAG 117 (272)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 7765543
No 453
>1lwj_A 4-alpha-glucanotransferase; alpha-amylase family, acarbose, (beta/alpha)8 barrel; HET: ACG; 2.50A {Thermotoga maritima} SCOP: b.71.1.1 c.1.8.1 PDB: 1lwh_A*
Probab=26.37 E-value=33 Score=31.50 Aligned_cols=27 Identities=19% Similarity=0.287 Sum_probs=24.0
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
.|...+++++++.||++|+-||+|-+.
T Consensus 66 ~Gt~~df~~lv~~aH~~Gi~VilD~V~ 92 (441)
T 1lwj_A 66 YGSEREFKEMIEAFHDSGIKVVLDLPI 92 (441)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECT
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 366678999999999999999999995
No 454
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=26.33 E-value=57 Score=26.93 Aligned_cols=74 Identities=12% Similarity=0.075 Sum_probs=41.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEE--EeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVK--RVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~--~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.+| .++..+++.|.+|++.+-.-....... ...+..+.++. ..+..|.+++++.++ .+..
T Consensus 10 k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 88 (253)
T 3qiv_A 10 KVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVA-KQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGID 88 (253)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 466777777666 455668888988876543322222221 11222343444 445557777776654 2566
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
.++-+
T Consensus 89 ~li~~ 93 (253)
T 3qiv_A 89 YLVNN 93 (253)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66644
No 455
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=26.29 E-value=2.1e+02 Score=23.57 Aligned_cols=75 Identities=11% Similarity=0.079 Sum_probs=39.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcE--EEEeCCCCHHHHHhhhC-------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVV--VKRVNTCDLDEVASAIG-------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~--~~~v~~~d~~~l~~~~~-------~~~ 140 (386)
..+++|+|+.++ .++..+++.|.+|++..-.-......... .+..+.+ +...+..|.+++++.++ .+.
T Consensus 10 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~i 88 (260)
T 2ae2_A 10 CTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQ-WRSKGFKVEASVCDLSSRSERQELMNTVANHFHGKL 88 (260)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 456677777666 45566778898887643221111111111 1122434 44455568877776653 356
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 89 d~lv~~A 95 (260)
T 2ae2_A 89 NILVNNA 95 (260)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666443
No 456
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=26.26 E-value=1.1e+02 Score=25.94 Aligned_cols=69 Identities=9% Similarity=0.132 Sum_probs=43.8
Q ss_pred CCCCcHHHHHhhhcccCCcEEEEeCCC-CH----HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 101 DLYGGTDRLLSRVTPKTGVVVKRVNTC-DL----DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~----~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
|.|......+...++..|..+...... |. +.++..+..+...|++...... .+....+.+++.++++|.
T Consensus 15 ~~~~~~~~gi~~~a~~~g~~~~~~~~~~~~~~~~~~i~~l~~~~vdgiIi~~~~~~-----~~~~~~~~~~~~~iPvV~ 88 (313)
T 3m9w_A 15 ERWQKDRDIFVKKAESLGAKVFVQSANGNEETQMSQIENMINRGVDVLVIIPYNGQ-----VLSNVVKEAKQEGIKVLA 88 (313)
T ss_dssp STTHHHHHHHHHHHHHTSCEEEEEECTTCHHHHHHHHHHHHHTTCSEEEEECSSTT-----SCHHHHHHHHTTTCEEEE
T ss_pred hHHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCEEEEeCCChh-----hhHHHHHHHHHCCCeEEE
Confidence 445555555677788889988877654 43 3344555578888887654321 234556667777887765
No 457
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=26.23 E-value=2.1e+02 Score=23.57 Aligned_cols=72 Identities=21% Similarity=0.297 Sum_probs=40.4
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-... ....+..+ +.....+..|.+++++.++ .+..
T Consensus 9 k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (255)
T 4eso_A 9 KKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNI----ARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAID 84 (255)
T ss_dssp CEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 456677777666 45566788898887654332222 22222223 4445556668777776554 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 85 ~lv~nA 90 (255)
T 4eso_A 85 LLHINA 90 (255)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 458
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=26.05 E-value=2.7e+02 Score=22.72 Aligned_cols=74 Identities=14% Similarity=0.171 Sum_probs=40.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++++|+.++ .++..+.+.|.+|++..-.-.........+ ...+.+...+..|.+++++.++ .+..++
T Consensus 7 k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 7 KVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL--GERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH--CTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc--CCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457778777666 355667788988876543321111111111 1234444556668777776654 245666
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 85 v~~A 88 (253)
T 1hxh_A 85 VNNA 88 (253)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 459
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=26.01 E-value=2.2e+02 Score=25.45 Aligned_cols=60 Identities=18% Similarity=0.185 Sum_probs=36.3
Q ss_pred cCCcEEEEeCC-CCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCC
Q 016612 116 KTGVVVKRVNT-CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNS 177 (386)
Q Consensus 116 ~~g~~~~~v~~-~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a 177 (386)
..++.+..... .+.+++++.+. ....+|.+... ..|.+....+++++|+++|+.+..-..
T Consensus 243 ~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~--~~GGit~~~~ia~~A~~~gi~~~~~~~ 304 (383)
T 3i4k_A 243 RTNVSVMADESVWTPAEALAVVKAQAADVIALKTT--KHGGLLESKKIAAIAEAGGLACHGATS 304 (383)
T ss_dssp HHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTT--TTTSHHHHHHHHHHHHHTTCEEEECCS
T ss_pred hCCCCEEecCccCCHHHHHHHHHcCCCCEEEEccc--ccCCHHHHHHHHHHHHHcCCeEEeCCC
Confidence 33444433332 25666666654 23455554432 257788888899999999988876443
No 460
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=25.78 E-value=1.3e+02 Score=25.11 Aligned_cols=74 Identities=9% Similarity=0.134 Sum_probs=47.8
Q ss_pred CCCcHHHHHhhhcccCCcEEEEeCC-CCHHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcC--CEEEEeCC
Q 016612 102 LYGGTDRLLSRVTPKTGVVVKRVNT-CDLDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHG--ALLLVDNS 177 (386)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~--~~li~D~a 177 (386)
.|.--...+..+++..|.+++.... ..++++.+.+. .++.+|.++....+ ....++++.+..++.+ +.+++-+.
T Consensus 135 ~HdiG~~iva~~L~~~G~~Vi~LG~~vp~e~l~~~~~~~~~d~V~lS~l~~~--~~~~~~~~i~~l~~~~~~~~v~vGG~ 212 (258)
T 2i2x_B 135 VHDIGKNIVTALLRANGYNVVDLGRDVPAEEVLAAVQKEKPIMLTGTALMTT--TMYAFKEVNDMLLENGIKIPFACGGG 212 (258)
T ss_dssp CCCHHHHHHHHHHHHTTCEEEEEEEECCSHHHHHHHHHHCCSEEEEECCCTT--TTTHHHHHHHHHHTTTCCCCEEEEST
T ss_pred ccHHHHHHHHHHHHHCCCEEEECCCCCCHHHHHHHHHHcCCCEEEEEeeccC--CHHHHHHHHHHHHhcCCCCcEEEECc
Confidence 4443444556778899999987653 35666655554 57888888765433 3445778887777754 66666544
No 461
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=25.75 E-value=2.1e+02 Score=23.53 Aligned_cols=74 Identities=15% Similarity=0.151 Sum_probs=39.6
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCc--HHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCc
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG--TDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~--~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
.+++++|+.+| .++..+.+.|.+|++..-.-.. ..... ..++..+ +.....+..|.+++++.++ .+.
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 82 (258)
T 3a28_C 4 VAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETI-KLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGGF 82 (258)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHH-HHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTCC
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46677777666 3555677778887764332211 11111 1122223 3444556668877776654 256
Q ss_pred eEEEEeC
Q 016612 141 KLVWVES 147 (386)
Q Consensus 141 ~~v~~~~ 147 (386)
.+++-+.
T Consensus 83 D~lv~nA 89 (258)
T 3a28_C 83 DVLVNNA 89 (258)
T ss_dssp CEEEECC
T ss_pred CEEEECC
Confidence 6666543
No 462
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=25.70 E-value=2.7e+02 Score=22.71 Aligned_cols=71 Identities=14% Similarity=0.147 Sum_probs=40.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.++ .++..+.+.|.+|++.+-.-.. ......+ . . .+...+..|.+++++.++ .+..++
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~-~--~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 81 (256)
T 2d1y_A 7 KGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAI-G--G-AFFQVDLEDERERVRFVEEAAYALGRVDVL 81 (256)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHH-T--C-EEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHh-h--C-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456677777666 4556678888888754322222 2221111 1 2 555667778877776654 256666
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 82 v~~A 85 (256)
T 2d1y_A 82 VNNA 85 (256)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 463
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.69 E-value=2.1e+02 Score=23.86 Aligned_cols=76 Identities=7% Similarity=0.017 Sum_probs=41.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC----CcEEEEeCCCCHHHHHhhhC------CC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT----GVVVKRVNTCDLDEVASAIG------PW 139 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~----g~~~~~v~~~d~~~l~~~~~------~~ 139 (386)
..+++|+|+.+| .++..+++.|.+|++..-.-.........+.... .+.+...+..|.+++++.++ .+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (280)
T 1xkq_A 7 KTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQFGK 86 (280)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 457777777666 4556677889888764332211111111111111 24555566668887776654 25
Q ss_pred ceEEEEeC
Q 016612 140 TKLVWVES 147 (386)
Q Consensus 140 ~~~v~~~~ 147 (386)
..+++-+.
T Consensus 87 iD~lv~nA 94 (280)
T 1xkq_A 87 IDVLVNNA 94 (280)
T ss_dssp CCEEEECC
T ss_pred CCEEEECC
Confidence 66766553
No 464
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=25.62 E-value=2.2e+02 Score=23.72 Aligned_cols=75 Identities=11% Similarity=0.069 Sum_probs=42.1
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccC--CcEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKT--GVVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~--g~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-....... ..++.. .......+..|.+++++.++ .+..
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD 107 (270)
T 3ftp_A 29 QVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIG-AAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGALN 107 (270)
T ss_dssp CEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCCC
Confidence 467778787776 355667888988876543322221111 111122 34555566668777776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 108 ~lvnnA 113 (270)
T 3ftp_A 108 VLVNNA 113 (270)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 665443
No 465
>3kv1_A Transcriptional repressor; alpha-beta structure, structural genomics, PSI-2, protein ST initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.70A {Vibrio fischeri} SCOP: c.124.1.0
Probab=25.62 E-value=2.2e+02 Score=23.86 Aligned_cols=48 Identities=19% Similarity=0.088 Sum_probs=32.1
Q ss_pred HHHHHHHHhhcCCCceEEeCcHH------HHH-----HHHHHhcCCCCEEEecCCCCCcHHH
Q 016612 58 DALESLLAKLDKADRALCFTSGM------AAL-----AAVTHLLGTGEEIVAGDDLYGGTDR 108 (386)
Q Consensus 58 ~~l~~~l~~~~g~~~~i~~~~gt------~al-----~~~~~~~~~g~~Vlv~~~~~~~~~~ 108 (386)
.++++.|.+.||.++++++.+.. ..+ ..+..++++|+.|-+ .|+.+..
T Consensus 10 ~~Le~~L~~~fgL~~~~Vvp~~~~~~~~~~~lg~aaA~~L~~~l~~~~vIGv---~wG~Tl~ 68 (267)
T 3kv1_A 10 VQLEQKLVEKFNLKRALISLDQPNTNEQRKQVAALVSSYLNNNLQEGMAVAV---GQGQNVA 68 (267)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCSSHHHHHHHHHHHHHHHHHHHCCTTCEEEE---CCSHHHH
T ss_pred HHHHHHHHHHhCCCEEEEeCCCCCchHHHHHHHHHHHHHHHHhCCCCCEEEE---CchHHHH
Confidence 68899999999999888775421 222 123346788887767 5776653
No 466
>1ht6_A AMY1, alpha-amylase isozyme 1; barley, beta-alpha-barrel, hydrolase; 1.50A {Hordeum vulgare} SCOP: b.71.1.1 c.1.8.1 PDB: 1p6w_A* 1rpk_A* 3bsg_A 2qpu_A* 1rp8_A* 1rp9_A* 2qps_A 3bsh_A* 1ava_A 1amy_A 1bg9_A*
Probab=25.50 E-value=36 Score=30.91 Aligned_cols=28 Identities=14% Similarity=0.261 Sum_probs=24.6
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
.|...+++++++.||++|+-||+|-++-
T Consensus 65 ~Gt~~d~~~lv~~~h~~Gi~VilD~V~N 92 (405)
T 1ht6_A 65 YGNAAELKSLIGALHGKGVQAIADIVIN 92 (405)
T ss_dssp TCCHHHHHHHHHHHHHTTCEEEEEECCS
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECcC
Confidence 3667789999999999999999999953
No 467
>1wza_A Alpha-amylase A; hydrolase, halophilic, thermophilic; 1.60A {Halothermothrix orenii} SCOP: b.71.1.1 c.1.8.1
Probab=25.38 E-value=40 Score=31.46 Aligned_cols=27 Identities=30% Similarity=0.477 Sum_probs=23.8
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
.|...+++++++.||++|+-||+|-++
T Consensus 78 ~Gt~~d~~~Lv~~aH~~Gi~VilD~V~ 104 (488)
T 1wza_A 78 YGTLEDFHKLVEAAHQRGIKVIIDLPI 104 (488)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCC
T ss_pred cCCHHHHHHHHHHHHHCCCEEEEEecc
Confidence 366668999999999999999999995
No 468
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=25.35 E-value=3.4e+02 Score=23.66 Aligned_cols=75 Identities=12% Similarity=0.069 Sum_probs=42.0
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCc-------HHHHHhhhcccCCcEEEE--eCCCCHHHHHhhhC---
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG-------TDRLLSRVTPKTGVVVKR--VNTCDLDEVASAIG--- 137 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~-------~~~~~~~~~~~~g~~~~~--v~~~d~~~l~~~~~--- 137 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-.. ..... ...+..|.++.. .|..|.+++++.++
T Consensus 46 k~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~-~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~ 124 (346)
T 3kvo_A 46 CTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAA-EEIEAVGGKALPCIVDVRDEQQISAAVEKAI 124 (346)
T ss_dssp CEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHH-HHHHHTTCEEEEEECCTTCHHHHHHHHHHHH
T ss_pred CEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHH-HHHHhcCCeEEEEEccCCCHHHHHHHHHHHH
Confidence 467777777776 3556688889887754322211 11111 222334444444 45558877776664
Q ss_pred ---CCceEEEEeC
Q 016612 138 ---PWTKLVWVES 147 (386)
Q Consensus 138 ---~~~~~v~~~~ 147 (386)
.+..+++-+.
T Consensus 125 ~~~g~iDilVnnA 137 (346)
T 3kvo_A 125 KKFGGIDILVNNA 137 (346)
T ss_dssp HHHSCCCEEEECC
T ss_pred HHcCCCCEEEECC
Confidence 3666766553
No 469
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=25.34 E-value=2.1e+02 Score=23.47 Aligned_cols=74 Identities=18% Similarity=0.178 Sum_probs=40.2
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCceE
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTKL 142 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~~ 142 (386)
.+++++|+.++ .++..+++.|.+|++..-.-......... ++..+ +.....+..|.+++++.++ .+..+
T Consensus 4 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~ 82 (256)
T 1geg_A 4 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASE-INQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDV 82 (256)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCE
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH-HHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 46677777666 45566788888887643221111111111 11223 4445556668887776664 25667
Q ss_pred EEEeC
Q 016612 143 VWVES 147 (386)
Q Consensus 143 v~~~~ 147 (386)
++-+.
T Consensus 83 lv~nA 87 (256)
T 1geg_A 83 IVNNA 87 (256)
T ss_dssp EEECC
T ss_pred EEECC
Confidence 66554
No 470
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=25.30 E-value=2.6e+02 Score=22.39 Aligned_cols=72 Identities=18% Similarity=0.151 Sum_probs=43.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhc-ccCCcEEEEeCCCCHHHHHhhhCC--CceEEEEe
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT-PKTGVVVKRVNTCDLDEVASAIGP--WTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~-~~~g~~~~~v~~~d~~~l~~~~~~--~~~~v~~~ 146 (386)
..+++++|+..+ .++..+++.|.+|++..-.-.... ... +..+.++...+..|.+++++.++. +..+++-+
T Consensus 8 ~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~----~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 83 (244)
T 1cyd_A 8 LRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLV----SLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNN 83 (244)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEEC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHH----HHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEEC
Confidence 356677777665 455667788888876443221111 111 123567777777799999888763 45666644
Q ss_pred C
Q 016612 147 S 147 (386)
Q Consensus 147 ~ 147 (386)
.
T Consensus 84 A 84 (244)
T 1cyd_A 84 A 84 (244)
T ss_dssp C
T ss_pred C
Confidence 3
No 471
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=25.29 E-value=2.4e+02 Score=21.98 Aligned_cols=40 Identities=13% Similarity=0.205 Sum_probs=26.9
Q ss_pred HHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 131 EVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 131 ~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
++...++++.-+|+++. +|...++-++++.|++.|+.+|.
T Consensus 106 ~~~~~~~~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~ 145 (199)
T 1x92_A 106 QIRALGQPGDVLLAIST----SGNSANVIQAIQAAHDREMLVVA 145 (199)
T ss_dssp HHHHHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HHHhCCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 34444566665666555 35666778888999999986654
No 472
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=25.26 E-value=2.3e+02 Score=23.52 Aligned_cols=75 Identities=5% Similarity=-0.005 Sum_probs=40.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhc--ccCC--cEEEEeCCCCHHHHHhhhC------CC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVT--PKTG--VVVKRVNTCDLDEVASAIG------PW 139 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~--~~~g--~~~~~v~~~d~~~l~~~~~------~~ 139 (386)
..+++++|+.++ .++..+++.|.+|++..-.-.........+. ...+ +.+...+..|.+++++.++ .+
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (278)
T 1spx_A 7 KVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKFGK 86 (278)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHcCC
Confidence 457778777666 3556677889888764322111111111110 1122 4445556668887777664 25
Q ss_pred ceEEEEe
Q 016612 140 TKLVWVE 146 (386)
Q Consensus 140 ~~~v~~~ 146 (386)
..+++-+
T Consensus 87 id~lv~~ 93 (278)
T 1spx_A 87 LDILVNN 93 (278)
T ss_dssp CCEEEEC
T ss_pred CCEEEEC
Confidence 6666544
No 473
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=25.26 E-value=2.3e+02 Score=21.69 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=21.6
Q ss_pred CCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEE
Q 016612 137 GPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLL 173 (386)
Q Consensus 137 ~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li 173 (386)
+++.-+|+++. +|...++.++.+.+++.|+.+|
T Consensus 95 ~~~d~vI~iS~----sG~t~~~~~~~~~ak~~g~~vi 127 (183)
T 2xhz_A 95 TPQDVVIAISN----SGESSEITALIPVLKRLHVPLI 127 (183)
T ss_dssp CTTCEEEEECS----SSCCHHHHHHHHHHHTTTCCEE
T ss_pred CCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCCEE
Confidence 34455555554 3666677888888998876544
No 474
>1gcy_A Glucan 1,4-alpha-maltotetrahydrolase; beta-alpha-barrel, beta sheet; 1.60A {Pseudomonas stutzeri} SCOP: b.71.1.1 c.1.8.1 PDB: 1jdc_A* 1jda_A* 1jdd_A* 1qi5_A* 1qi3_A* 1qi4_A* 2amg_A 1qpk_A*
Probab=25.22 E-value=44 Score=31.57 Aligned_cols=29 Identities=17% Similarity=0.116 Sum_probs=25.4
Q ss_pred CCCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 150 NPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 150 nptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
...|...+++++++.||++|+-||+|-++
T Consensus 87 p~~Gt~~dfk~Lv~~aH~~GI~VilD~V~ 115 (527)
T 1gcy_A 87 GRYGSDAQLRQAASALGGAGVKVLYDVVP 115 (527)
T ss_dssp SSSCCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCCHHHHHHHHHHHHHCCCEEEEEEee
Confidence 33577788999999999999999999995
No 475
>1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A*
Probab=25.06 E-value=1.1e+02 Score=26.45 Aligned_cols=74 Identities=19% Similarity=0.127 Sum_probs=39.8
Q ss_pred eEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCc------HHHHHhhhc--ccCCcEEEEeCCCCHHHHHhhhCC-Cce
Q 016612 73 ALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGG------TDRLLSRVT--PKTGVVVKRVNTCDLDEVASAIGP-WTK 141 (386)
Q Consensus 73 ~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~------~~~~~~~~~--~~~g~~~~~v~~~d~~~l~~~~~~-~~~ 141 (386)
.+++++|+..+ +++..+++.|.+|++.+-.-.. .......+. ...+++++..+..|.+++.+++.. +..
T Consensus 4 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~d 83 (348)
T 1ek6_A 4 KVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKYSFM 83 (348)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHCCEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhcCCC
Confidence 35566555444 4566677778777653211111 000111111 123567777787888888887763 566
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
+|+-.
T Consensus 84 ~vih~ 88 (348)
T 1ek6_A 84 AVIHF 88 (348)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66644
No 476
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=25.00 E-value=44 Score=28.15 Aligned_cols=74 Identities=12% Similarity=0.120 Sum_probs=41.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEe--CCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRV--NTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v--~~~d~~~l~~~~~------~~~~ 141 (386)
+.+++|+|+.+| .....+.+.|-+|++.+-.-....... +.++..|.++..+ |..|.+++++.++ .+..
T Consensus 8 KvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~-~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~iD 86 (254)
T 4fn4_A 8 KVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIV-QELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRID 86 (254)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 466777777777 345567788988887554322222222 2233445555444 4457777776654 3555
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
.++=+
T Consensus 87 iLVNN 91 (254)
T 4fn4_A 87 VLCNN 91 (254)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 55433
No 477
>4aie_A Glucan 1,6-alpha-glucosidase; hydrolase, glycoside hydrolase 13; HET: MES GOL; 2.05A {Lactobacillus acidophilus ncfm}
Probab=24.98 E-value=36 Score=32.18 Aligned_cols=26 Identities=15% Similarity=0.330 Sum_probs=23.4
Q ss_pred cccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 153 QQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 153 G~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
|...+++++++.||++|+-||.|-++
T Consensus 77 Gt~~dfk~Lv~~aH~~Gi~VilD~V~ 102 (549)
T 4aie_A 77 GTMADMDELISKAKEHHIKIVMDLVV 102 (549)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCHHHHHHHHHHHHHCCCEEEEEECc
Confidence 55667999999999999999999995
No 478
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=24.97 E-value=1.7e+02 Score=25.13 Aligned_cols=77 Identities=17% Similarity=0.253 Sum_probs=41.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCC-------CC--cHHHH--HhhhcccCCcE--EEEeCCCCHHHHHhhh
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDL-------YG--GTDRL--LSRVTPKTGVV--VKRVNTCDLDEVASAI 136 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~-------~~--~~~~~--~~~~~~~~g~~--~~~v~~~d~~~l~~~~ 136 (386)
..+++|+|+.+| .++..+.+.|..|++.+-. +. ..... .....+..+.+ ....+..|.+++++.+
T Consensus 47 k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 126 (317)
T 3oec_A 47 KVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQAVV 126 (317)
T ss_dssp CEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHH
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHH
Confidence 467788887776 3556688889888764321 10 01111 11112233434 4445555777777665
Q ss_pred C------CCceEEEEeCC
Q 016612 137 G------PWTKLVWVESP 148 (386)
Q Consensus 137 ~------~~~~~v~~~~~ 148 (386)
+ .+..+++-+..
T Consensus 127 ~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 127 DEALAEFGHIDILVSNVG 144 (317)
T ss_dssp HHHHHHHSCCCEEEECCC
T ss_pred HHHHHHcCCCCEEEECCC
Confidence 4 25666665533
No 479
>1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A*
Probab=24.94 E-value=2.1e+02 Score=24.44 Aligned_cols=96 Identities=16% Similarity=0.164 Sum_probs=49.1
Q ss_pred EEeCcHHHHH--HHHHHhcCC---C---CEEEec-CCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEE
Q 016612 74 LCFTSGMAAL--AAVTHLLGT---G---EEIVAG-DDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVW 144 (386)
Q Consensus 74 i~~~~gt~al--~~~~~~~~~---g---~~Vlv~-~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~ 144 (386)
+++++|+..+ +++..+++. | .+|++. +.........+.......+++++..+..|.+.+.+++. +..+|+
T Consensus 3 vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~-~~d~Vi 81 (337)
T 1r6d_A 3 LLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLAPVDADPRLRFVHGDIRDAGLLARELR-GVDAIV 81 (337)
T ss_dssp EEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGGGGTTCTTEEEEECCTTCHHHHHHHTT-TCCEEE
T ss_pred EEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhhhcccCCCeEEEEcCCCCHHHHHHHhc-CCCEEE
Confidence 4556555444 455556664 6 566643 32211111001111122456777777789999988874 566766
Q ss_pred EeCCCCCCcc------------cccHHHHHHHHHHcCC
Q 016612 145 VESPTNPRQQ------------ICDIRKIAEMAHAHGA 170 (386)
Q Consensus 145 ~~~~~nptG~------------~~~l~~i~~la~~~~~ 170 (386)
-......... +.-...+.+.|++.++
T Consensus 82 h~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~~~~ 119 (337)
T 1r6d_A 82 HFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVDAGV 119 (337)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred ECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 5432211110 0113467788888765
No 480
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=24.90 E-value=1e+02 Score=25.96 Aligned_cols=74 Identities=11% Similarity=0.159 Sum_probs=42.9
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC------CCceEE
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG------PWTKLV 143 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~------~~~~~v 143 (386)
..+++|+|+.+| .++..+.+.|.+|++.+-.-.........+ ...+.....|..|.+++++.++ .+..++
T Consensus 29 k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 29 KIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEI--GDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH--TSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh--CCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 467788888776 355667888988876543322221111111 1235556667678887776664 256676
Q ss_pred EEeC
Q 016612 144 WVES 147 (386)
Q Consensus 144 ~~~~ 147 (386)
+-+.
T Consensus 107 VnnA 110 (272)
T 4dyv_A 107 FNNA 110 (272)
T ss_dssp EECC
T ss_pred EECC
Confidence 6543
No 481
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=24.89 E-value=1.9e+02 Score=23.66 Aligned_cols=72 Identities=13% Similarity=0.164 Sum_probs=40.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++++|+.++ .++..+.+.|.+|++..-.-... ....+..+ +.+...+..|.+++++.++ .+..
T Consensus 6 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD 81 (254)
T 1hdc_A 6 KTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEG----AATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVD 81 (254)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHH----HHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 356677777666 45566778898887643321111 12222223 4445556668877776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 82 ~lv~nA 87 (254)
T 1hdc_A 82 GLVNNA 87 (254)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766543
No 482
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=24.84 E-value=1.2e+02 Score=26.72 Aligned_cols=74 Identities=11% Similarity=0.236 Sum_probs=45.6
Q ss_pred CCCCcHHHHHhhhcccCCcEEEEeCCCC-HHHHHhhhC-CCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 101 DLYGGTDRLLSRVTPKTGVVVKRVNTCD-LDEVASAIG-PWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 101 ~~~~~~~~~~~~~~~~~g~~~~~v~~~d-~~~l~~~~~-~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
|.|.+...+... .-...+-++.++... .+.+.+.+. ..++.+++-...-|. .+.+++.++|+++|+.|+==.+.
T Consensus 65 pvy~sv~ea~~~-~p~~DlaVi~vp~~~a~~ai~ea~~~~Gv~~vViiT~G~~e---~~~~~l~~~a~~~g~rliGPNc~ 140 (334)
T 3mwd_B 65 PVFKNMADAMRK-HPEVDVLINFASLRSAYDSTMETMNYAQIRTIAIIAEGIPE---ALTRKLIKKADQKGVTIIGPATV 140 (334)
T ss_dssp EEESSHHHHHHH-CTTCCEEEECCCTTTHHHHHHHHTTSTTCCEEEECCSCCCH---HHHHHHHHHHHHHTCEEECSSCC
T ss_pred eeeCCHHHHhhc-CCCCcEEEEecCHHHHHHHHHHHHHHCCCCEEEEECCCCCH---HHHHHHHHHHHHcCCEEEccCCc
Confidence 566666532211 002356666777765 367667776 678877764432221 36788999999999988754443
No 483
>2dh2_A 4F2 cell-surface antigen heavy chain; TIM-barrel, glycosidase like, antiparallel beta-sheet, greek terminal domain, extracellular domain; 2.10A {Homo sapiens} PDB: 2dh3_A
Probab=24.82 E-value=42 Score=30.68 Aligned_cols=28 Identities=11% Similarity=0.046 Sum_probs=24.6
Q ss_pred CcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 152 RQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 152 tG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
.|...+++++++.||++|+-||.|-++-
T Consensus 78 ~Gt~~d~~~lv~~ah~~Gi~vilD~V~N 105 (424)
T 2dh2_A 78 FGSKEDFDSLLQSAKKKSIRVILDLTPN 105 (424)
T ss_dssp GCCHHHHHHHHHHHHHTTCEEEEECCTT
T ss_pred CCCHHHHHHHHHHHHHCCCEEEEEECCC
Confidence 4666789999999999999999999963
No 484
>2e8y_A AMYX protein, pullulanase; multiple domain, beta-alpha-barrel, alpha-amylase-family, HY; 2.11A {Bacillus subtilis} PDB: 2e8z_A* 2e9b_A*
Probab=24.80 E-value=25 Score=34.82 Aligned_cols=25 Identities=16% Similarity=0.396 Sum_probs=22.2
Q ss_pred cccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 155 ICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 155 ~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
..+++++++.||++|+-||.|-++-
T Consensus 315 ~~dfk~LV~~aH~~GI~VIlDvV~N 339 (718)
T 2e8y_A 315 KTELKQMINTLHQHGLRVILDVVFN 339 (718)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEECTT
T ss_pred HHHHHHHHHHHHHCCCEEEEEEecc
Confidence 4678999999999999999999963
No 485
>3a11_A Translation initiation factor EIF-2B, delta subun; isomerase, hexamer, rossmann fold; 2.50A {Thermococcus kodakaraensis} PDB: 3a9c_A* 3vm6_A*
Probab=24.80 E-value=1.6e+02 Score=25.88 Aligned_cols=98 Identities=13% Similarity=0.143 Sum_probs=53.7
Q ss_pred ceEEeCcHH-HHHHHHHHhcCCC--CEEEecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEe
Q 016612 72 RALCFTSGM-AALAAVTHLLGTG--EEIVAGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVE 146 (386)
Q Consensus 72 ~~i~~~~gt-~al~~~~~~~~~g--~~Vlv~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~ 146 (386)
+.|++-+.+ .++..+....+.| -+|++.+ |.+.+.. ....+...|+++..+.-.....+ + .+...|++-
T Consensus 143 ~~ILTh~~S~tvl~~l~~A~~~gk~~~V~v~EtRP~~qGrl--tA~eL~~~GI~vtlI~Dsa~~~~---M-~~Vd~VivG 216 (338)
T 3a11_A 143 DVIMTHCHSKAAISVMKTAWEQGKDIKVIVTETRPKWQGKI--TAKELASYGIPVIYVVDSAARHY---M-KMTDKVVMG 216 (338)
T ss_dssp CEEEECSCCHHHHHHHHHHHHTTCCCEEEEECCTTTTHHHH--HHHHHHHTTCCEEEECGGGTTTT---G-GGCSEEEEC
T ss_pred CEEEEeCCcHHHHHHHHHHHHCCCeEEEEEeCCCCchhhHH--HHHHHHhCCCCEEEEehHHHHHH---H-HhCCEEEEC
Confidence 456665544 3344444444333 4566554 5555522 22335567888888874322222 2 345666663
Q ss_pred -CCCCCCccccc---HHHHHHHHHHcCCEEEEe
Q 016612 147 -SPTNPRQQICD---IRKIAEMAHAHGALLLVD 175 (386)
Q Consensus 147 -~~~nptG~~~~---l~~i~~la~~~~~~li~D 175 (386)
.---..|.+.+ --.++-+|+.+|+++++=
T Consensus 217 Ad~V~anG~v~NKiGT~~lAl~Ak~~~vPfyV~ 249 (338)
T 3a11_A 217 ADSITVNGAVINKIGTALIALTAKEHRVWTMIA 249 (338)
T ss_dssp CSEECTTSCEEEETTHHHHHHHHHHTTCEEEEE
T ss_pred ccEEecCCCEeecccHHHHHHHHHHcCCCEEEe
Confidence 11112355543 466788889999999884
No 486
>3re1_A Uroporphyrinogen-III synthetase; HEMD-like family, uroporphyrinogen III synthase, HMB, lyase; 2.50A {Pseudomonas syringae PV}
Probab=24.56 E-value=42 Score=28.43 Aligned_cols=56 Identities=16% Similarity=0.018 Sum_probs=37.7
Q ss_pred CCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC------CHHHHHhhhC--CCceEEEEeCCC
Q 016612 92 TGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC------DLDEVASAIG--PWTKLVWVESPT 149 (386)
Q Consensus 92 ~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~------d~~~l~~~~~--~~~~~v~~~~~~ 149 (386)
.|..|++++|.-... .+...++..|.++..+|.. +.+.+.+.+. ++...|++++++
T Consensus 13 ~g~~IlvTRp~~~a~--~l~~~L~~~G~~~~~~P~i~i~~~~~~~~l~~~l~~l~~~d~vifTS~n 76 (269)
T 3re1_A 13 SAWRLLLTRPAEESA--ALARVLADAGIFSSSLPLLETEPLPLTPAQRSIIFELLNYSAVIVVSKP 76 (269)
T ss_dssp CCCEEEECSCHHHHH--HHHHHHHTTTCEEEECCCCEEEECCCHHHHHHHHHTGGGSSEEEECSHH
T ss_pred CCCEEEEeCChHHHH--HHHHHHHHCCCCEEEcCCEEEecCCCcHHHHHHHHhccCCCEEEEECHH
Confidence 478999999865433 2346677899999988864 4445555443 356788877764
No 487
>3e2i_A Thymidine kinase; Zn-binding, ATP-binding, DNA synthesis, nucleotide-B transferase; HET: MSE; 2.01A {Staphylococcus aureus}
Probab=24.52 E-value=1e+02 Score=25.25 Aligned_cols=91 Identities=9% Similarity=0.119 Sum_probs=49.0
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHH
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
+.+..+......|..|++..|.-..-.. -..++.+.|....-++..+.+++.+.+..+..+|+++=.+..+-. -++.
T Consensus 44 ~Llr~~~r~~~~g~kvli~kp~~D~R~~-~~~I~Sr~G~~~~a~~v~~~~di~~~i~~~~dvV~IDEaQFf~~~--~v~~ 120 (219)
T 3e2i_A 44 ELIRRLRRGIYAKQKVVVFKPAIDDRYH-KEKVVSHNGNAIEAINISKASEIMTHDLTNVDVIGIDEVQFFDDE--IVSI 120 (219)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEC------------CBTTBCCEEEEESSGGGGGGSCCTTCSEEEECCGGGSCTH--HHHH
T ss_pred HHHHHHHHHHHcCCceEEEEeccCCcch-hhhHHHhcCCceeeEEeCCHHHHHHHHhcCCCEEEEechhcCCHH--HHHH
Confidence 3445555555556667665553321110 124556677666655555666776666667788888876654311 1345
Q ss_pred HHHHHHHcCCEEEEe
Q 016612 161 IAEMAHAHGALLLVD 175 (386)
Q Consensus 161 i~~la~~~~~~li~D 175 (386)
+.+++ +.|+.||+=
T Consensus 121 l~~la-~~gi~Vi~~ 134 (219)
T 3e2i_A 121 VEKLS-ADGHRVIVA 134 (219)
T ss_dssp HHHHH-HTTCEEEEE
T ss_pred HHHHH-HCCCEEEEe
Confidence 55555 568888863
No 488
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=24.46 E-value=1.9e+02 Score=23.54 Aligned_cols=75 Identities=15% Similarity=0.163 Sum_probs=40.2
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCC--cEEEEeCCCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTG--VVVKRVNTCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g--~~~~~v~~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|..|++..-.-......... ++..+ +.....+..|.+++++.++ .+..
T Consensus 8 k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~-l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 86 (247)
T 2jah_A 8 KVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDE-LTAAGAKVHVLELDVADRQGVDAAVASTVEALGGLD 86 (247)
T ss_dssp CEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH-HHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCS
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH-HHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 356677777666 45566778888887643321111111111 11223 4445556668877776654 2566
Q ss_pred EEEEeC
Q 016612 142 LVWVES 147 (386)
Q Consensus 142 ~v~~~~ 147 (386)
+++-+.
T Consensus 87 ~lv~nA 92 (247)
T 2jah_A 87 ILVNNA 92 (247)
T ss_dssp EEEECC
T ss_pred EEEECC
Confidence 766553
No 489
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=24.26 E-value=1.3e+02 Score=26.80 Aligned_cols=84 Identities=8% Similarity=-0.008 Sum_probs=52.8
Q ss_pred cCCC-CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhhCC-CceEEEEeCCCCCCcccccHHHHHHHHH
Q 016612 90 LGTG-EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAIGP-WTKLVWVESPTNPRQQICDIRKIAEMAH 166 (386)
Q Consensus 90 ~~~g-~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~~~-~~~~v~~~~~~nptG~~~~l~~i~~la~ 166 (386)
+.+- +...+.+|.-+.....+..+.+..++.+...+.. +.+++++.+.. ...+|.+. -+..|.+....+++++|+
T Consensus 207 l~~~~~i~~iEqP~~~~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik--~~~~GGit~~~~i~~~A~ 284 (382)
T 2gdq_A 207 FSEWTNIGWLEEPLPFDQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPD--VMHVNGIDEFRDCLQLAR 284 (382)
T ss_dssp HTTCSCEEEEECCSCSSCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCC--TTTTTHHHHHHHHHHHHH
T ss_pred HhhccCCeEEECCCCcccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecC--ccccCCHHHHHHHHHHHH
Confidence 4443 4556777754333333445555556665554432 67777777753 34555433 334688888999999999
Q ss_pred HcCCEEEEe
Q 016612 167 AHGALLLVD 175 (386)
Q Consensus 167 ~~~~~li~D 175 (386)
++|+.++.=
T Consensus 285 ~~g~~~~~~ 293 (382)
T 2gdq_A 285 YFGVRASAH 293 (382)
T ss_dssp HHTCEECCC
T ss_pred HcCCEEeec
Confidence 999987776
No 490
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=24.21 E-value=1.2e+02 Score=24.52 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=59.6
Q ss_pred HHHHHHHHHhhcCCC---ceEEeCcHHHHHHHHHH-hcCCCCEEE-ecC--CCCCcHHHHHhhhcccCCcEEEEeCCCCH
Q 016612 57 RDALESLLAKLDKAD---RALCFTSGMAALAAVTH-LLGTGEEIV-AGD--DLYGGTDRLLSRVTPKTGVVVKRVNTCDL 129 (386)
Q Consensus 57 ~~~l~~~l~~~~g~~---~~i~~~~gt~al~~~~~-~~~~g~~Vl-v~~--~~~~~~~~~~~~~~~~~g~~~~~v~~~d~ 129 (386)
...+.+.+.+.+|.+ ..++++.|..+...+.. ....|-+++ +-+ |.-.+ ....|..+.. .
T Consensus 64 v~~L~~~~~~~lg~~~~~rV~IIGaG~~G~~la~~~~~~~g~~iVg~~D~dp~k~g--------~~i~gv~V~~-----~ 130 (211)
T 2dt5_A 64 VPVLKRELRHILGLNRKWGLCIVGMGRLGSALADYPGFGESFELRGFFDVDPEKVG--------RPVRGGVIEH-----V 130 (211)
T ss_dssp HHHHHHHHHHHHTTTSCEEEEEECCSHHHHHHHHCSCCCSSEEEEEEEESCTTTTT--------CEETTEEEEE-----G
T ss_pred hHHHHHHHHHHhCcCCCCEEEEECccHHHHHHHHhHhhcCCcEEEEEEeCCHHHHh--------hhhcCCeeec-----H
Confidence 445566666666654 57888888766554433 122232332 222 21110 1123444432 3
Q ss_pred HHHHhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEEeCCCC
Q 016612 130 DEVASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLVDNSIM 179 (386)
Q Consensus 130 ~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~D~a~~ 179 (386)
+++++.+.+++..+++..|+.. .+++.+.|.+.|+..|..+.-.
T Consensus 131 ~dl~ell~~~ID~ViIA~Ps~~------~~ei~~~l~~aGi~~Ilnf~P~ 174 (211)
T 2dt5_A 131 DLLPQRVPGRIEIALLTVPREA------AQKAADLLVAAGIKGILNFAPV 174 (211)
T ss_dssp GGHHHHSTTTCCEEEECSCHHH------HHHHHHHHHHHTCCEEEECSSS
T ss_pred HhHHHHHHcCCCEEEEeCCchh------HHHHHHHHHHcCCCEEEECCcc
Confidence 4566666447889988877642 3589999999998878776643
No 491
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=24.20 E-value=80 Score=26.34 Aligned_cols=75 Identities=17% Similarity=0.181 Sum_probs=40.6
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcc---cCCcEEEEeCCCCHHHHHhhhC------CCc
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTP---KTGVVVKRVNTCDLDEVASAIG------PWT 140 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~---~~g~~~~~v~~~d~~~l~~~~~------~~~ 140 (386)
..+++++|+.+| .++..+.+.|.+|++..-.-.........+.+ ...+.....|..|.+++++.++ .+.
T Consensus 14 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 93 (267)
T 1iy8_A 14 RVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFGRI 93 (267)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 456777777666 45566778898887643322111111111111 1234455556668887776664 256
Q ss_pred eEEEEe
Q 016612 141 KLVWVE 146 (386)
Q Consensus 141 ~~v~~~ 146 (386)
.+++-+
T Consensus 94 d~lv~n 99 (267)
T 1iy8_A 94 DGFFNN 99 (267)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 666654
No 492
>1jae_A Alpha-amylase; glycosidase, carbohydrate metabolism, 4-glucan-4-glucanohydrolase, hydrolase; 1.65A {Tenebrio molitor} SCOP: b.71.1.1 c.1.8.1 PDB: 1clv_A 1tmq_A 1viw_A*
Probab=24.12 E-value=35 Score=31.73 Aligned_cols=28 Identities=14% Similarity=0.213 Sum_probs=24.9
Q ss_pred CCcccccHHHHHHHHHHcCCEEEEeCCC
Q 016612 151 PRQQICDIRKIAEMAHAHGALLLVDNSI 178 (386)
Q Consensus 151 ptG~~~~l~~i~~la~~~~~~li~D~a~ 178 (386)
..|...+++++++.||++|+-||+|-++
T Consensus 70 ~~Gt~~d~~~lv~~~h~~Gi~VilD~V~ 97 (471)
T 1jae_A 70 RSGDESAFTDMTRRCNDAGVRIYVDAVI 97 (471)
T ss_dssp TTEEHHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CCCCHHHHHHHHHHHHHCCCEEEEEEec
Confidence 3577778999999999999999999995
No 493
>3mfq_A TROA, high-affinity zinc uptake system protein ZNUA; metal binding protein; 2.60A {Streptococcus suis} SCOP: c.92.2.0
Probab=24.06 E-value=55 Score=28.02 Aligned_cols=70 Identities=20% Similarity=0.255 Sum_probs=40.2
Q ss_pred CEEEecCCCCCcHHHHHhhhcccCCcEEEEeCC------CCHHHHHhh---hC-CCceEEEEeCCCCCCcccccHHHHHH
Q 016612 94 EEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNT------CDLDEVASA---IG-PWTKLVWVESPTNPRQQICDIRKIAE 163 (386)
Q Consensus 94 ~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~------~d~~~l~~~---~~-~~~~~v~~~~~~nptG~~~~l~~i~~ 163 (386)
..+++.++.|. -.++.+|++...+.. .++.++.+. ++ .++++|+++.-.++ -..+.|.+
T Consensus 164 ~~~vt~H~af~-------Y~~~~yGl~~~~~~~~~~~~eps~~~l~~l~~~ik~~~v~~if~e~~~~~----~~~~~l~~ 232 (282)
T 3mfq_A 164 RYLVTPHDAFN-------YFAASYDFTLYAPQGVSTDSEVANSDMIETVNLIIDHNIKAIFTESTTNP----ERMKKLQE 232 (282)
T ss_dssp CEEECSSSCCH-------HHHHHTTCEEECSSCSSSCSCCCHHHHHHHHHHHHHHTCCEEECBTTSCT----HHHHHHHH
T ss_pred cEEEEECchHH-------HHHHHCCCeEecccccCCCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCCh----HHHHHHHH
Confidence 44555555552 345678888765431 144444444 43 57788876644332 12467778
Q ss_pred HHHHcCCEEEE
Q 016612 164 MAHAHGALLLV 174 (386)
Q Consensus 164 la~~~~~~li~ 174 (386)
+|++.|+.+++
T Consensus 233 ~a~~~g~~v~~ 243 (282)
T 3mfq_A 233 AVKAKGGQVEV 243 (282)
T ss_dssp HHHTTSCCCEE
T ss_pred HHHhcCCceEE
Confidence 88888865443
No 494
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=24.01 E-value=1.1e+02 Score=24.93 Aligned_cols=90 Identities=11% Similarity=0.078 Sum_probs=36.2
Q ss_pred HHHHHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhCCCceEEEEeCCCCCCcccccHHH
Q 016612 81 AALAAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIGPWTKLVWVESPTNPRQQICDIRK 160 (386)
Q Consensus 81 ~al~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~~~~~~v~~~~~~nptG~~~~l~~ 160 (386)
+++..+......|.+|++..|.-..-... ..+....|..+.-++..+.+++.+.+..+..+|+++=.+..+-. .++.
T Consensus 44 ~lL~~a~r~~~~g~kVli~k~~~d~R~ge-~~i~s~~g~~~~a~~~~~~~~~~~~~~~~~dvViIDEaQF~~~~--~V~~ 120 (214)
T 2j9r_A 44 ELIRRVRRTQFAKQHAIVFKPCIDNRYSE-EDVVSHNGLKVKAVPVSASKDIFKHITEEMDVIAIDEVQFFDGD--IVEV 120 (214)
T ss_dssp HHHHHHHHHHHTTCCEEEEECC------------------CCEEECSSGGGGGGGCCSSCCEEEECCGGGSCTT--HHHH
T ss_pred HHHHHHHHHHHCCCEEEEEEeccCCcchH-HHHHhhcCCeeEEeecCCHHHHHHHHhcCCCEEEEECcccCCHH--HHHH
Confidence 44455555555666676654432211000 13334445544433434444555444444667777655442111 1333
Q ss_pred HHHHHHHcCCEEEE
Q 016612 161 IAEMAHAHGALLLV 174 (386)
Q Consensus 161 i~~la~~~~~~li~ 174 (386)
+..++. .|+.||+
T Consensus 121 l~~l~~-~~~~Vi~ 133 (214)
T 2j9r_A 121 VQVLAN-RGYRVIV 133 (214)
T ss_dssp HHHHHH-TTCEEEE
T ss_pred HHHHhh-CCCEEEE
Confidence 444333 3666665
No 495
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=24.01 E-value=2.9e+02 Score=22.37 Aligned_cols=72 Identities=11% Similarity=0.200 Sum_probs=42.5
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeCCCCHHHHHhhhC--CCceEEEEeC
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVNTCDLDEVASAIG--PWTKLVWVES 147 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~~~d~~~l~~~~~--~~~~~v~~~~ 147 (386)
..+++++|+.++ .++..+++.|.+|++.+-.- . ......+...+.....+..|.+++++..+ .+..+++-+.
T Consensus 7 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~---~-~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~A 82 (246)
T 2ag5_A 7 KVIILTAAAQGIGQAAALAFAREGAKVIATDINE---S-KLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVA 82 (246)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCH---H-HHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCH---H-HHHHHHhccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECC
Confidence 457778777666 45566788898887643221 1 11222222245666667778888876543 3566666553
No 496
>3ezx_A MMCP 1, monomethylamine corrinoid protein 1; N terminal all helical bundle C terminal rossmann fold, cobalt, metal-binding; HET: HCB; 2.56A {Methanosarcina barkeri}
Probab=23.83 E-value=1.5e+02 Score=24.07 Aligned_cols=74 Identities=7% Similarity=0.059 Sum_probs=49.8
Q ss_pred CCCcHHHHHhhhcccCCcEEEEeCCC-CHHHHHhhh-CCCceEEEE--eCCCCCCcccccHHHHHHHHHHcC----CEEE
Q 016612 102 LYGGTDRLLSRVTPKTGVVVKRVNTC-DLDEVASAI-GPWTKLVWV--ESPTNPRQQICDIRKIAEMAHAHG----ALLL 173 (386)
Q Consensus 102 ~~~~~~~~~~~~~~~~g~~~~~v~~~-d~~~l~~~~-~~~~~~v~~--~~~~nptG~~~~l~~i~~la~~~~----~~li 173 (386)
.|.--......+++..|.+++....+ .++++.+.+ ..++++|.+ +.... .....++++.+..++.+ +.++
T Consensus 104 ~HdiG~~iv~~~l~~~G~~Vi~LG~~vp~e~iv~~~~~~~~d~v~l~~S~l~~--~~~~~~~~~i~~l~~~~~~~~v~v~ 181 (215)
T 3ezx_A 104 IHDIGHRLVTTMLGANGFQIVDLGVDVLNENVVEEAAKHKGEKVLLVGSALMT--TSMLGQKDLMDRLNEEKLRDSVKCM 181 (215)
T ss_dssp CCCHHHHHHHHHHHHTSCEEEECCSSCCHHHHHHHHHHTTTSCEEEEEECSSH--HHHTHHHHHHHHHHHTTCGGGSEEE
T ss_pred hhHHHHHHHHHHHHHCCCeEEEcCCCCCHHHHHHHHHHcCCCEEEEEchhccc--CcHHHHHHHHHHHHHcCCCCCCEEE
Confidence 44434445567789999999887654 777876554 478888888 55433 34445788888888764 5666
Q ss_pred EeCC
Q 016612 174 VDNS 177 (386)
Q Consensus 174 ~D~a 177 (386)
+-++
T Consensus 182 vGG~ 185 (215)
T 3ezx_A 182 FGGA 185 (215)
T ss_dssp EESS
T ss_pred EECC
Confidence 6554
No 497
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=23.81 E-value=1.1e+02 Score=25.87 Aligned_cols=74 Identities=11% Similarity=0.023 Sum_probs=42.3
Q ss_pred ceEEeCcHHHHH--HHHHHhcCCCCEEEecCCCCCcHHHHHhhhcccCCcEEEEeC--CCCHHHHHhhhC------CCce
Q 016612 72 RALCFTSGMAAL--AAVTHLLGTGEEIVAGDDLYGGTDRLLSRVTPKTGVVVKRVN--TCDLDEVASAIG------PWTK 141 (386)
Q Consensus 72 ~~i~~~~gt~al--~~~~~~~~~g~~Vlv~~~~~~~~~~~~~~~~~~~g~~~~~v~--~~d~~~l~~~~~------~~~~ 141 (386)
..+++|+|+.+| .++..+.+.|.+|++..-.-....... ..+...+.++..+. ..|.+++++.++ .+..
T Consensus 9 k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 87 (280)
T 3tox_A 9 KIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELT-DEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGLD 87 (280)
T ss_dssp CEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHH-HHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467788887776 355667888988887654322222222 22233444555554 447777766654 2566
Q ss_pred EEEEe
Q 016612 142 LVWVE 146 (386)
Q Consensus 142 ~v~~~ 146 (386)
+++-+
T Consensus 88 ~lvnn 92 (280)
T 3tox_A 88 TAFNN 92 (280)
T ss_dssp EEEEC
T ss_pred EEEEC
Confidence 66544
No 498
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=23.79 E-value=1.6e+02 Score=22.29 Aligned_cols=53 Identities=13% Similarity=0.144 Sum_probs=36.8
Q ss_pred CHHHHHhhhC-CCceEEEEeCCCCCCccccc-H---HHHH-HHHHHcCC-EEEEeCCCCC
Q 016612 128 DLDEVASAIG-PWTKLVWVESPTNPRQQICD-I---RKIA-EMAHAHGA-LLLVDNSIMS 180 (386)
Q Consensus 128 d~~~l~~~~~-~~~~~v~~~~~~nptG~~~~-l---~~i~-~la~~~~~-~li~D~a~~~ 180 (386)
+.+.|.+.+. .++..+++..|-|+.|...+ . +.++ .++++.++ +..+||.+++
T Consensus 43 ~~~~l~~li~~~~~~~ivVGlP~~~nGt~~~~~~~ar~f~~~L~~~~~lpV~~vDEr~Ts 102 (150)
T 1vhx_A 43 GLSRLSELIKDYTIDKIVLGFPKNMNGTVGPRGEASQTFAKVLETTYNVPVVLWDERLTT 102 (150)
T ss_dssp CHHHHHHHHTTSEEEEEEEECCCCBTTBCCHHHHHHHHHHHHHHHHHCSCEEEECCSSCH
T ss_pred HHHHHHHHHHHcCCCEEEEeeeecCCcchhHHHHHHHHHHHHHHHhhCCCEEEecCCCCH
Confidence 6788888887 47889999988887777654 2 3333 44455676 4567998763
No 499
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=23.74 E-value=2.6e+02 Score=21.73 Aligned_cols=38 Identities=18% Similarity=0.107 Sum_probs=26.2
Q ss_pred HhhhCCCceEEEEeCCCCCCcccccHHHHHHHHHHcCCEEEE
Q 016612 133 ASAIGPWTKLVWVESPTNPRQQICDIRKIAEMAHAHGALLLV 174 (386)
Q Consensus 133 ~~~~~~~~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~li~ 174 (386)
...++++.-+|+++. +|...++-+..+.|+++|+.+|.
T Consensus 104 ~~~~~~~DvvI~iS~----SG~t~~~i~~~~~ak~~g~~vI~ 141 (196)
T 2yva_A 104 RALGHAGDVLLAIST----RGNSRDIVKAVEAAVTRDMTIVA 141 (196)
T ss_dssp HHHCCTTCEEEEECS----SSCCHHHHHHHHHHHHTTCEEEE
T ss_pred HhcCCCCCEEEEEeC----CCCCHHHHHHHHHHHHCCCEEEE
Confidence 344556665666555 36667778888999999986654
No 500
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=23.72 E-value=2.4e+02 Score=25.23 Aligned_cols=77 Identities=6% Similarity=0.002 Sum_probs=46.1
Q ss_pred EEecCCCCCcH-HHHHhhhcccCCcEEEEeCC-CCHHHHHhhhCCC-ceEEEEeCCCCCCcccccHHHHHHHHHHcCCEE
Q 016612 96 IVAGDDLYGGT-DRLLSRVTPKTGVVVKRVNT-CDLDEVASAIGPW-TKLVWVESPTNPRQQICDIRKIAEMAHAHGALL 172 (386)
Q Consensus 96 Vlv~~~~~~~~-~~~~~~~~~~~g~~~~~v~~-~d~~~l~~~~~~~-~~~v~~~~~~nptG~~~~l~~i~~la~~~~~~l 172 (386)
..+.+|..+.. ...+..+.+..++.+..... .+..++++.+..+ ..+|-+. -...|.+.+..+|+++|+++|+.+
T Consensus 228 ~~iEeP~~~~d~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k--~~~~GGit~~~~ia~~A~~~gi~~ 305 (392)
T 3ddm_A 228 DWLEEPLRADRPAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPD--LAKWGGFSGCLPVARAVVAAGLRY 305 (392)
T ss_dssp SEEECCSCTTSCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCC--TTTTTHHHHHHHHHHHHHHTTCEE
T ss_pred CEEECCCCccchHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeC--cchhCCHHHHHHHHHHHHHcCCEE
Confidence 35666655433 33334455555555554443 2677777766532 3333222 234688888999999999999987
Q ss_pred EE
Q 016612 173 LV 174 (386)
Q Consensus 173 i~ 174 (386)
..
T Consensus 306 ~~ 307 (392)
T 3ddm_A 306 CP 307 (392)
T ss_dssp CC
T ss_pred Ee
Confidence 53
Done!