Query 016618
Match_columns 386
No_of_seqs 257 out of 596
Neff 4.8
Searched_HMMs 13730
Date Mon Mar 25 16:36:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016618.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016618hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2mysa2 c.37.1.9 (A:4-33,A:80- 96.9 0.00035 2.5E-08 73.4 5.6 42 28-69 735-780 (794)
2 d1kk8a2 c.37.1.9 (A:1-28,A:77- 96.9 0.00027 2E-08 74.2 4.4 42 28-69 731-776 (789)
3 d2mysa2 c.37.1.9 (A:4-33,A:80- 93.9 0.029 2.1E-06 58.4 6.1 54 41-94 725-779 (794)
4 d1kk8a2 c.37.1.9 (A:1-28,A:77- 91.6 0.093 6.8E-06 54.5 6.0 44 51-94 732-775 (789)
5 d1iufa2 a.4.1.7 (A:76-141) Ars 5.0 2.6E+02 0.019 18.8 3.2 8 180-187 54-61 (66)
6 d1hlva2 a.4.1.7 (A:67-131) DNA 4.0 1.1E+02 0.0084 20.7 0.5 8 180-187 55-62 (65)
7 d1w7ja2 c.37.1.9 (A:63-792) My 3.3 3.7E+02 0.027 26.0 3.8 20 74-93 704-723 (730)
8 d1v54h_ a.51.1.1 (H:) Cytochro 2.9 1.6E+02 0.011 21.4 0.3 8 180-187 61-68 (79)
9 d1quua2 a.7.1.1 (A:125-248) al 2.7 5.5E+02 0.04 17.9 3.5 32 124-155 90-121 (124)
10 d1mxga1 b.71.1.1 (A:362-435) B 2.5 1.1E+02 0.0081 21.5 -1.0 11 176-186 8-18 (74)
No 1
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=96.90 E-value=0.00035 Score=73.38 Aligned_cols=42 Identities=17% Similarity=0.241 Sum_probs=36.6
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhh----hhHHHHHhhhcccchhhhh
Q 016618 28 EAAAIRIQTAFRGYLARRALRAL----RGLVRLKLLMEGPVVKRQA 69 (386)
Q Consensus 28 e~AAi~IQsafRGylARr~l~al----kglVrLQalvRG~~vRrqa 69 (386)
..+|+.||+.||||++|+.|+.+ +.++.||+.+||+++||.+
T Consensus 735 ~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~~ 780 (794)
T d2mysa2 735 AEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKHW 780 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 46899999999999999999876 3688889999999888876
No 2
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=96.87 E-value=0.00027 Score=74.15 Aligned_cols=42 Identities=29% Similarity=0.378 Sum_probs=36.1
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhhh----hHHHHHhhhcccchhhhh
Q 016618 28 EAAAIRIQTAFRGYLARRALRALR----GLVRLKLLMEGPVVKRQA 69 (386)
Q Consensus 28 e~AAi~IQsafRGylARr~l~alk----glVrLQalvRG~~vRrqa 69 (386)
..+|+.||+.||||++|+.|+.++ .++.||..+||+++||.+
T Consensus 731 ~~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~~ 776 (789)
T d1kk8a2 731 SKIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRNW 776 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 468999999999999999999884 577788888888888776
No 3
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=93.88 E-value=0.029 Score=58.39 Aligned_cols=54 Identities=11% Similarity=0.025 Sum_probs=43.3
Q ss_pred HHHHHHHHhh-hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618 41 YLARRALRAL-RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS 94 (386)
Q Consensus 41 ylARr~l~al-kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s 94 (386)
+|....-..+ +.++.||+.+||+++|+.+...+....|++.||+.+|++..|+.
T Consensus 725 ~LE~~r~~~l~~~~~~IQ~~~Rg~l~Rk~~~~~~~~r~a~~~IQ~~~R~~~~~r~ 779 (794)
T d2mysa2 725 LLEEMRDDKLAEIITATQARCRGFLMRVEYRAMVERRESIFCIQYNVRSFMNVKH 779 (794)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3444433444 66889999999999999998777778899999999999988763
No 4
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=91.59 E-value=0.093 Score=54.45 Aligned_cols=44 Identities=16% Similarity=0.144 Sum_probs=37.2
Q ss_pred hhHHHHHhhhcccchhhhhHHHHHHHhHHHHHHHHHHHHHhhhh
Q 016618 51 RGLVRLKLLMEGPVVKRQAANTLRCMQTLSRLQSQIRSRRVRMS 94 (386)
Q Consensus 51 kglVrLQalvRG~~vRrqa~~tlr~~qAav~vQs~vR~r~~R~s 94 (386)
+.++.||+.+||++.|+++........+++.||+.+|++.+|+.
T Consensus 732 ~~~~~IQ~~~R~~~~Rk~y~k~r~~~~ai~~iQ~~~R~~~~rr~ 775 (789)
T d1kk8a2 732 KIISMFQAHIRGYLIRKAYKKLQDQRIGLSVIQRNIRKWLVLRN 775 (789)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 56788899999999999996555556688999999999988864
No 5
>d1iufa2 a.4.1.7 (A:76-141) Ars-binding protein 1, ABP1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}
Probab=4.95 E-value=2.6e+02 Score=18.76 Aligned_cols=8 Identities=38% Similarity=0.945 Sum_probs=6.5
Q ss_pred chhhhhhc
Q 016618 180 SWLERWMA 187 (386)
Q Consensus 180 sWLERWma 187 (386)
.||+||+.
T Consensus 54 GWL~rFK~ 61 (66)
T d1iufa2 54 GWLEGFRK 61 (66)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 49999974
No 6
>d1hlva2 a.4.1.7 (A:67-131) DNA-binding domain of centromere binding protein B (CENP-B) {Human (Homo sapiens) [TaxId: 9606]}
Probab=3.99 E-value=1.1e+02 Score=20.71 Aligned_cols=8 Identities=38% Similarity=1.136 Sum_probs=6.7
Q ss_pred chhhhhhc
Q 016618 180 SWLERWMA 187 (386)
Q Consensus 180 sWLERWma 187 (386)
.||+||+.
T Consensus 55 GWL~rFK~ 62 (65)
T d1hlva2 55 GWLDRFRR 62 (65)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 49999985
No 7
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=3.25 E-value=3.7e+02 Score=25.97 Aligned_cols=20 Identities=25% Similarity=0.287 Sum_probs=15.5
Q ss_pred HHHhHHHHHHHHHHHHHhhh
Q 016618 74 RCMQTLSRLQSQIRSRRVRM 93 (386)
Q Consensus 74 r~~qAav~vQs~vR~r~~R~ 93 (386)
....+++.||+.+|++.+|+
T Consensus 704 ~l~~~~~~iQ~~~R~~l~Rk 723 (730)
T d1w7ja2 704 KLRAACIRIQKTIRGWLMRK 723 (730)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 34567888899888888776
No 8
>d1v54h_ a.51.1.1 (H:) Cytochrome c oxidase subunit h {Cow (Bos taurus) [TaxId: 9913]}
Probab=2.87 E-value=1.6e+02 Score=21.44 Aligned_cols=8 Identities=38% Similarity=1.211 Sum_probs=6.1
Q ss_pred chhhhhhc
Q 016618 180 SWLERWMA 187 (386)
Q Consensus 180 sWLERWma 187 (386)
.|+|+|-.
T Consensus 61 ~WiekWde 68 (79)
T d1v54h_ 61 SWVSTWDD 68 (79)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 49999954
No 9
>d1quua2 a.7.1.1 (A:125-248) alpha-actinin {Human (Homo sapiens) [TaxId: 9606]}
Probab=2.70 E-value=5.5e+02 Score=17.90 Aligned_cols=32 Identities=6% Similarity=0.099 Sum_probs=27.2
Q ss_pred cccHHHHHHHHhhhhHHHHHHHHhhhhhhhhh
Q 016618 124 IQSKEQVEANLLSKYEATMRRERAMAYSFTHQ 155 (386)
Q Consensus 124 ~~s~eei~a~l~~k~EAa~kRERAlaYAfshQ 155 (386)
....++|..+|..=.+++..|++.|.-++-.|
T Consensus 90 ~~~~~~L~~~W~~L~~~~~~R~~~L~e~l~~Q 121 (124)
T d1quua2 90 TVTMDELRTKWDKVKQLVPIRDQSLQEELARQ 121 (124)
T ss_dssp SSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34578999999999999999999999887655
No 10
>d1mxga1 b.71.1.1 (A:362-435) Bacterial alpha-Amylase {Archaeon Pyrococcus woesei [TaxId: 2262]}
Probab=2.48 E-value=1.1e+02 Score=21.48 Aligned_cols=11 Identities=27% Similarity=0.963 Sum_probs=0.0
Q ss_pred CCCCchhhhhh
Q 016618 176 TWGWSWLERWM 186 (386)
Q Consensus 176 ~wgWsWLERWm 186 (386)
|.|-+|.+||.
T Consensus 8 nlgs~~~~rwv 18 (74)
T d1mxga1 8 NLSPNWVGRWV 18 (74)
T ss_dssp ECSSSCEEEEE
T ss_pred ecCccccccEE
Done!