Query 016620
Match_columns 386
No_of_seqs 195 out of 1962
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 16:38:12 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016620.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016620hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4g2n_A D-isomer specific 2-hyd 100.0 5.4E-69 1.8E-73 527.9 39.1 319 13-354 26-345 (345)
2 3kb6_A D-lactate dehydrogenase 100.0 2.2E-68 7.6E-73 522.4 28.6 312 16-356 1-330 (334)
3 4e5n_A Thermostable phosphite 100.0 7.1E-67 2.4E-71 511.2 36.8 319 14-355 1-327 (330)
4 4dgs_A Dehydrogenase; structur 100.0 3.6E-67 1.2E-71 514.0 29.7 314 12-354 27-340 (340)
5 3k5p_A D-3-phosphoglycerate de 100.0 5E-66 1.7E-70 516.1 37.3 316 11-355 11-332 (416)
6 2yq5_A D-isomer specific 2-hyd 100.0 6E-66 2.1E-70 505.9 30.8 316 15-356 1-334 (343)
7 1sc6_A PGDH, D-3-phosphoglycer 100.0 3.3E-65 1.1E-69 511.3 36.3 319 12-361 1-325 (404)
8 3hg7_A D-isomer specific 2-hyd 100.0 1.5E-65 5.1E-70 499.5 30.1 309 13-356 3-313 (324)
9 3evt_A Phosphoglycerate dehydr 100.0 1.4E-65 4.9E-70 500.1 27.5 315 15-362 1-319 (324)
10 3gg9_A D-3-phosphoglycerate de 100.0 4.6E-64 1.6E-68 494.6 34.7 315 15-355 2-334 (352)
11 2pi1_A D-lactate dehydrogenase 100.0 6.2E-65 2.1E-69 498.0 25.4 313 16-356 1-330 (334)
12 3jtm_A Formate dehydrogenase, 100.0 1.2E-63 4.1E-68 491.3 30.2 299 29-348 32-333 (351)
13 1j4a_A D-LDH, D-lactate dehydr 100.0 1.1E-62 3.7E-67 482.5 33.7 314 16-355 2-332 (333)
14 3pp8_A Glyoxylate/hydroxypyruv 100.0 5.1E-63 1.8E-67 480.6 29.9 307 13-359 1-315 (315)
15 2g76_A 3-PGDH, D-3-phosphoglyc 100.0 3.3E-62 1.1E-66 478.7 34.6 311 13-351 24-334 (335)
16 4hy3_A Phosphoglycerate oxidor 100.0 3.2E-63 1.1E-67 489.7 27.5 312 15-355 27-349 (365)
17 1xdw_A NAD+-dependent (R)-2-hy 100.0 1.2E-62 4.1E-67 481.9 30.7 313 16-354 1-331 (331)
18 2cuk_A Glycerate dehydrogenase 100.0 1.3E-61 4.5E-66 470.5 37.4 309 16-353 1-310 (311)
19 1dxy_A D-2-hydroxyisocaproate 100.0 4.8E-63 1.7E-67 484.9 27.0 312 16-355 1-330 (333)
20 2nac_A NAD-dependent formate d 100.0 5.2E-62 1.8E-66 485.3 30.9 323 13-356 38-368 (393)
21 1gdh_A D-glycerate dehydrogena 100.0 2E-60 6.9E-65 464.1 39.3 313 16-351 2-316 (320)
22 2ekl_A D-3-phosphoglycerate de 100.0 5.4E-61 1.8E-65 466.7 34.9 306 15-350 5-313 (313)
23 1wwk_A Phosphoglycerate dehydr 100.0 1.9E-60 6.4E-65 461.8 35.2 305 14-346 2-307 (307)
24 2j6i_A Formate dehydrogenase; 100.0 4.6E-62 1.6E-66 483.1 22.6 324 16-361 18-355 (364)
25 3ba1_A HPPR, hydroxyphenylpyru 100.0 3.4E-60 1.2E-64 464.3 35.0 310 15-354 23-333 (333)
26 2gcg_A Glyoxylate reductase/hy 100.0 2.9E-59 9.8E-64 457.9 37.4 323 12-355 5-330 (330)
27 2dbq_A Glyoxylate reductase; D 100.0 2.2E-58 7.7E-63 452.2 35.9 317 15-354 2-322 (334)
28 2d0i_A Dehydrogenase; structur 100.0 1.8E-58 6.1E-63 452.6 33.8 313 15-355 2-319 (333)
29 1mx3_A CTBP1, C-terminal bindi 100.0 1.1E-58 3.8E-63 455.7 31.0 317 13-354 19-343 (347)
30 2w2k_A D-mandelate dehydrogena 100.0 2E-58 6.8E-63 454.8 30.5 324 15-362 3-344 (348)
31 1ygy_A PGDH, D-3-phosphoglycer 100.0 2E-57 6.8E-62 470.5 37.0 333 15-381 4-336 (529)
32 1qp8_A Formate dehydrogenase; 100.0 4.7E-58 1.6E-62 443.9 28.6 297 16-360 1-301 (303)
33 3oet_A Erythronate-4-phosphate 100.0 7.7E-58 2.6E-62 452.2 27.9 283 14-351 2-288 (381)
34 3gvx_A Glycerate dehydrogenase 100.0 9.3E-56 3.2E-60 424.6 21.9 250 62-348 34-284 (290)
35 2o4c_A Erythronate-4-phosphate 100.0 5.3E-55 1.8E-59 432.9 27.5 283 16-353 1-287 (380)
36 1v8b_A Adenosylhomocysteinase; 100.0 1.2E-35 4.1E-40 301.3 16.2 251 87-384 194-454 (479)
37 3d64_A Adenosylhomocysteinase; 100.0 2.3E-36 8E-41 307.5 4.7 249 87-384 214-469 (494)
38 3d4o_A Dipicolinate synthase s 99.9 1E-27 3.5E-32 230.5 13.6 215 14-276 4-248 (293)
39 2rir_A Dipicolinate synthase, 99.9 2.5E-24 8.4E-29 207.5 14.1 221 14-276 6-250 (300)
40 3ce6_A Adenosylhomocysteinase; 99.9 9.7E-25 3.3E-29 222.7 7.6 225 89-353 214-445 (494)
41 2vhw_A Alanine dehydrogenase; 99.9 1.1E-22 3.8E-27 202.0 18.8 290 29-362 22-352 (377)
42 2eez_A Alanine dehydrogenase; 99.8 5.8E-19 2E-23 174.7 15.5 293 28-361 21-348 (369)
43 1gtm_A Glutamate dehydrogenase 99.8 1.1E-20 3.9E-25 189.3 2.9 154 161-345 207-386 (419)
44 3h9u_A Adenosylhomocysteinase; 99.8 3.5E-17 1.2E-21 163.5 20.7 236 10-285 38-312 (436)
45 1x13_A NAD(P) transhydrogenase 99.7 9.6E-17 3.3E-21 160.5 13.8 229 29-279 29-301 (401)
46 3n58_A Adenosylhomocysteinase; 99.7 1.6E-16 5.5E-21 158.6 14.0 141 107-284 206-347 (464)
47 3gvp_A Adenosylhomocysteinase 99.7 4E-15 1.4E-19 148.3 19.2 103 161-283 216-319 (435)
48 1l7d_A Nicotinamide nucleotide 99.6 1.3E-15 4.4E-20 151.5 14.8 239 29-277 22-301 (384)
49 1gpj_A Glutamyl-tRNA reductase 99.6 1.6E-17 5.5E-22 166.3 -2.8 218 88-351 83-329 (404)
50 3doj_A AT3G25530, dehydrogenas 99.3 8.5E-12 2.9E-16 120.2 9.3 117 161-292 17-135 (310)
51 3obb_A Probable 3-hydroxyisobu 99.3 1.3E-11 4.4E-16 118.7 10.2 113 166-293 4-118 (300)
52 3p2y_A Alanine dehydrogenase/p 99.3 1.7E-10 5.7E-15 113.8 18.3 250 9-277 16-309 (381)
53 3l6d_A Putative oxidoreductase 99.2 2E-11 6.8E-16 117.4 10.6 117 161-292 5-121 (306)
54 4gbj_A 6-phosphogluconate dehy 99.2 1.6E-11 5.5E-16 117.7 9.4 120 166-300 6-125 (297)
55 3qsg_A NAD-binding phosphogluc 99.2 6.1E-11 2.1E-15 114.3 13.1 130 143-289 3-134 (312)
56 3ggo_A Prephenate dehydrogenas 99.2 1.1E-10 3.7E-15 112.9 14.4 154 162-333 30-190 (314)
57 4dll_A 2-hydroxy-3-oxopropiona 99.2 3.6E-11 1.2E-15 116.3 10.9 118 162-294 28-146 (320)
58 1c1d_A L-phenylalanine dehydro 99.2 2.9E-10 9.8E-15 111.4 16.1 108 162-292 172-280 (355)
59 2g5c_A Prephenate dehydrogenas 99.2 2E-10 7E-15 108.4 13.5 142 166-324 2-150 (281)
60 4e21_A 6-phosphogluconate dehy 99.2 1.2E-10 4E-15 114.6 12.0 122 163-301 20-144 (358)
61 4e12_A Diketoreductase; oxidor 99.2 5.1E-10 1.7E-14 106.3 15.9 155 166-333 5-171 (283)
62 3pef_A 6-phosphogluconate dehy 99.1 7E-11 2.4E-15 112.2 9.0 112 166-292 2-115 (287)
63 3qha_A Putative oxidoreductase 99.1 6.5E-11 2.2E-15 113.2 8.4 119 165-300 15-133 (296)
64 2pv7_A T-protein [includes: ch 99.1 9.8E-11 3.4E-15 112.1 8.8 119 165-321 21-142 (298)
65 3pdu_A 3-hydroxyisobutyrate de 99.1 1.3E-10 4.5E-15 110.4 8.5 112 166-292 2-115 (287)
66 3g0o_A 3-hydroxyisobutyrate de 99.1 8.2E-11 2.8E-15 112.8 7.0 114 164-292 6-122 (303)
67 4gwg_A 6-phosphogluconate dehy 99.1 2.7E-10 9.1E-15 116.1 11.0 125 165-300 4-131 (484)
68 3ond_A Adenosylhomocysteinase; 99.1 6.8E-10 2.3E-14 112.5 13.6 95 161-275 261-355 (488)
69 4ezb_A Uncharacterized conserv 99.1 2.7E-10 9.1E-15 110.1 10.2 123 165-301 24-150 (317)
70 2h78_A Hibadh, 3-hydroxyisobut 99.1 4.1E-10 1.4E-14 107.5 10.7 111 166-291 4-116 (302)
71 2d5c_A AROE, shikimate 5-dehyd 99.0 4.6E-10 1.6E-14 105.4 9.6 196 30-289 21-221 (263)
72 3dtt_A NADP oxidoreductase; st 99.0 2.1E-10 7.2E-15 106.7 6.9 107 150-272 4-124 (245)
73 1np3_A Ketol-acid reductoisome 99.0 1.8E-10 6.1E-15 112.4 5.8 136 161-322 12-155 (338)
74 4dio_A NAD(P) transhydrogenase 99.0 5.8E-10 2E-14 110.8 9.0 113 162-278 187-320 (405)
75 3b1f_A Putative prephenate deh 99.0 2E-09 6.8E-14 102.1 11.9 143 166-324 7-158 (290)
76 2hk9_A Shikimate dehydrogenase 99.0 1.3E-09 4.4E-14 103.2 9.3 195 31-288 33-233 (275)
77 1vpd_A Tartronate semialdehyde 99.0 1.7E-09 5.7E-14 102.9 9.4 109 166-289 6-116 (299)
78 3cky_A 2-hydroxymethyl glutara 98.9 3E-09 1E-13 101.2 10.3 109 166-289 5-115 (301)
79 3ktd_A Prephenate dehydrogenas 98.9 1.3E-09 4.5E-14 106.4 7.2 132 165-321 8-153 (341)
80 2f1k_A Prephenate dehydrogenas 98.9 9.7E-09 3.3E-13 96.7 12.5 145 166-330 1-149 (279)
81 2zyd_A 6-phosphogluconate dehy 98.9 7.8E-09 2.7E-13 105.4 12.7 118 163-292 13-133 (480)
82 2gf2_A Hibadh, 3-hydroxyisobut 98.9 3.1E-09 1.1E-13 100.9 8.6 108 166-288 1-110 (296)
83 1yb4_A Tartronic semialdehyde 98.9 2.2E-09 7.6E-14 101.7 6.4 108 166-289 4-113 (295)
84 2dpo_A L-gulonate 3-dehydrogen 98.9 4.4E-08 1.5E-12 94.7 15.6 156 165-332 6-172 (319)
85 1zej_A HBD-9, 3-hydroxyacyl-CO 98.8 3E-08 1E-12 94.7 13.8 147 163-333 10-157 (293)
86 2p4q_A 6-phosphogluconate dehy 98.8 1.9E-08 6.4E-13 103.0 12.8 116 166-292 11-129 (497)
87 2cvz_A Dehydrogenase, 3-hydrox 98.8 1E-08 3.5E-13 96.8 10.1 106 166-289 2-107 (289)
88 2uyy_A N-PAC protein; long-cha 98.8 8.2E-09 2.8E-13 99.1 8.8 109 166-289 31-141 (316)
89 3k6j_A Protein F01G10.3, confi 98.8 1.2E-07 4.2E-12 95.8 17.3 156 166-335 55-218 (460)
90 2iz1_A 6-phosphogluconate dehy 98.8 2.4E-08 8.3E-13 101.6 12.1 116 166-293 6-124 (474)
91 2pgd_A 6-phosphogluconate dehy 98.8 2.5E-08 8.5E-13 101.7 11.4 118 166-294 3-123 (482)
92 1pgj_A 6PGDH, 6-PGDH, 6-phosph 98.8 3E-08 1E-12 101.0 11.5 124 166-299 2-130 (478)
93 1leh_A Leucine dehydrogenase; 98.7 2.4E-08 8.2E-13 98.2 9.8 108 162-291 170-278 (364)
94 2q3e_A UDP-glucose 6-dehydroge 98.7 6.7E-08 2.3E-12 98.2 12.5 149 166-317 6-181 (467)
95 1i36_A Conserved hypothetical 98.7 2.3E-08 7.9E-13 93.3 8.3 103 166-288 1-104 (264)
96 2yjz_A Metalloreductase steap4 98.2 1.8E-09 6.2E-14 97.6 0.0 94 163-277 17-110 (201)
97 3fr7_A Putative ketol-acid red 98.7 1.8E-08 6.2E-13 101.6 7.0 124 161-303 49-180 (525)
98 3d1l_A Putative NADP oxidoredu 98.7 2.2E-08 7.4E-13 93.7 7.2 103 160-278 5-108 (266)
99 1pjc_A Protein (L-alanine dehy 98.6 6.9E-07 2.4E-11 87.7 16.8 223 29-273 22-268 (361)
100 3oj0_A Glutr, glutamyl-tRNA re 98.6 9.7E-08 3.3E-12 81.0 9.1 93 165-275 21-113 (144)
101 1f0y_A HCDH, L-3-hydroxyacyl-C 98.6 9.7E-07 3.3E-11 84.2 16.4 154 166-332 16-185 (302)
102 3pid_A UDP-glucose 6-dehydroge 98.6 2.9E-07 1E-11 92.4 11.9 124 159-289 30-170 (432)
103 3mog_A Probable 3-hydroxybutyr 98.6 7.4E-07 2.5E-11 90.8 14.5 154 165-333 5-170 (483)
104 2vns_A Metalloreductase steap3 98.5 9.5E-08 3.3E-12 86.9 7.0 95 164-278 27-121 (215)
105 2i99_A MU-crystallin homolog; 98.5 2.6E-07 8.9E-12 88.9 10.3 97 163-276 133-230 (312)
106 2raf_A Putative dinucleotide-b 98.5 8.9E-08 3E-12 86.8 5.8 80 161-276 15-94 (209)
107 3c24_A Putative oxidoreductase 98.5 1.8E-07 6E-12 88.6 7.8 92 166-275 12-104 (286)
108 1mv8_A GMD, GDP-mannose 6-dehy 98.5 6.8E-07 2.3E-11 89.9 12.4 119 166-288 1-140 (436)
109 3gt0_A Pyrroline-5-carboxylate 98.5 3E-07 1E-11 85.1 8.9 105 166-288 3-111 (247)
110 2izz_A Pyrroline-5-carboxylate 98.5 7E-07 2.4E-11 86.1 11.4 108 163-288 20-132 (322)
111 2ahr_A Putative pyrroline carb 98.4 7.3E-07 2.5E-11 82.8 9.9 102 166-289 4-105 (259)
112 3gg2_A Sugar dehydrogenase, UD 98.4 1.5E-06 5.3E-11 87.7 12.5 119 166-288 3-138 (450)
113 3tri_A Pyrroline-5-carboxylate 98.4 6.7E-07 2.3E-11 84.6 7.8 106 165-288 3-112 (280)
114 4a7p_A UDP-glucose dehydrogena 98.3 1.8E-06 6.2E-11 87.0 11.1 111 166-288 9-145 (446)
115 1b0a_A Protein (fold bifunctio 98.3 1.4E-06 4.9E-11 82.4 9.2 169 33-276 58-235 (288)
116 1zcj_A Peroxisomal bifunctiona 98.3 8.4E-06 2.9E-10 82.6 15.3 131 165-300 37-175 (463)
117 4a5o_A Bifunctional protein fo 98.3 2.3E-06 7.8E-11 80.9 10.2 171 31-276 58-237 (286)
118 1wdk_A Fatty oxidation complex 98.3 4.4E-06 1.5E-10 89.0 13.6 156 165-333 314-479 (715)
119 3p2o_A Bifunctional protein fo 98.3 1.9E-06 6.5E-11 81.4 9.2 172 31-276 56-236 (285)
120 3k96_A Glycerol-3-phosphate de 98.3 3E-06 1E-10 83.0 11.0 110 165-279 29-140 (356)
121 2o3j_A UDP-glucose 6-dehydroge 98.3 4E-06 1.4E-10 85.3 12.4 119 166-288 10-151 (481)
122 1yqg_A Pyrroline-5-carboxylate 98.3 9.2E-07 3.2E-11 82.2 6.9 100 166-288 1-102 (263)
123 3ngx_A Bifunctional protein fo 98.3 2E-06 6.8E-11 80.9 9.0 77 163-275 148-225 (276)
124 1edz_A 5,10-methylenetetrahydr 98.3 1E-06 3.4E-11 84.9 7.1 98 159-274 171-277 (320)
125 3l07_A Bifunctional protein fo 98.3 2.3E-06 7.7E-11 80.9 9.3 170 31-275 57-236 (285)
126 2c2x_A Methylenetetrahydrofola 98.3 2.4E-06 8.1E-11 80.5 9.4 170 32-276 56-236 (281)
127 1a4i_A Methylenetetrahydrofola 98.3 2.8E-06 9.5E-11 80.8 9.5 80 161-276 161-241 (301)
128 1dlj_A UDP-glucose dehydrogena 98.3 4.4E-06 1.5E-10 83.1 11.5 110 166-288 1-133 (402)
129 1jay_A Coenzyme F420H2:NADP+ o 98.3 4.5E-06 1.6E-10 74.9 10.5 124 166-304 1-137 (212)
130 2y0c_A BCEC, UDP-glucose dehyd 98.2 3.8E-06 1.3E-10 85.5 11.1 119 165-287 8-143 (478)
131 3don_A Shikimate dehydrogenase 98.2 2.4E-06 8.1E-11 80.9 8.8 109 162-289 114-225 (277)
132 4a26_A Putative C-1-tetrahydro 98.2 2.4E-06 8.4E-11 81.2 8.7 173 31-276 60-243 (300)
133 1bg6_A N-(1-D-carboxylethyl)-L 98.2 4.2E-06 1.4E-10 81.0 10.5 118 166-288 5-124 (359)
134 3u62_A Shikimate dehydrogenase 98.2 5.5E-06 1.9E-10 77.4 10.7 105 163-289 107-214 (253)
135 2wtb_A MFP2, fatty acid multif 98.2 9.2E-06 3.1E-10 86.7 13.7 154 166-333 313-477 (725)
136 1x0v_A GPD-C, GPDH-C, glycerol 98.2 3.7E-06 1.3E-10 81.6 9.5 107 165-276 8-128 (354)
137 2rcy_A Pyrroline carboxylate r 98.2 2.1E-06 7.1E-11 79.7 7.1 98 165-288 4-105 (262)
138 1txg_A Glycerol-3-phosphate de 98.2 4.2E-06 1.4E-10 80.3 9.4 110 166-288 1-124 (335)
139 1evy_A Glycerol-3-phosphate de 98.2 1.8E-06 6E-11 84.5 6.8 106 167-276 17-128 (366)
140 3g79_A NDP-N-acetyl-D-galactos 98.2 4.3E-06 1.5E-10 85.0 9.5 116 166-284 19-159 (478)
141 3ado_A Lambda-crystallin; L-gu 98.1 2.1E-05 7.1E-10 75.8 12.9 149 164-322 5-165 (319)
142 1yj8_A Glycerol-3-phosphate de 98.1 3.8E-06 1.3E-10 82.5 7.8 105 166-275 22-144 (375)
143 2egg_A AROE, shikimate 5-dehyd 98.1 1.6E-05 5.4E-10 75.9 11.2 114 162-289 138-255 (297)
144 1y81_A Conserved hypothetical 98.1 4.3E-06 1.5E-10 70.8 6.4 103 163-292 12-118 (138)
145 2dc1_A L-aspartate dehydrogena 98.1 7.3E-06 2.5E-10 75.3 8.3 97 166-290 1-102 (236)
146 3ojo_A CAP5O; rossmann fold, c 98.1 1.2E-05 4E-10 80.8 10.3 110 163-286 9-143 (431)
147 3hdj_A Probable ornithine cycl 98.1 1.7E-05 5.8E-10 76.3 11.0 96 164-275 120-216 (313)
148 2ew2_A 2-dehydropantoate 2-red 98.0 6.1E-06 2.1E-10 78.1 7.0 116 166-288 4-123 (316)
149 1z82_A Glycerol-3-phosphate de 98.0 8E-06 2.7E-10 78.9 7.7 93 165-274 14-113 (335)
150 4huj_A Uncharacterized protein 98.0 7.4E-06 2.5E-10 74.5 6.9 93 165-275 23-116 (220)
151 1ks9_A KPA reductase;, 2-dehyd 98.0 5.4E-06 1.8E-10 77.7 6.1 97 166-275 1-100 (291)
152 1x7d_A Ornithine cyclodeaminas 98.0 2.5E-05 8.7E-10 76.2 11.1 100 164-274 128-228 (350)
153 3c85_A Putative glutathione-re 98.0 5.6E-06 1.9E-10 72.6 5.1 100 161-273 35-140 (183)
154 3dfu_A Uncharacterized protein 98.0 8.4E-06 2.9E-10 75.1 6.0 71 164-272 5-75 (232)
155 2g1u_A Hypothetical protein TM 97.9 5.9E-05 2E-09 64.4 10.8 104 159-275 13-121 (155)
156 2duw_A Putative COA-binding pr 97.9 5.7E-06 1.9E-10 70.6 4.3 101 165-292 13-119 (145)
157 2z2v_A Hypothetical protein PH 97.9 1.1E-05 3.7E-10 79.3 5.9 114 162-291 13-126 (365)
158 1vl6_A Malate oxidoreductase; 97.9 4.7E-05 1.6E-09 74.8 10.3 103 161-276 188-298 (388)
159 2i76_A Hypothetical protein; N 97.9 8.4E-06 2.9E-10 76.7 4.2 88 166-275 3-92 (276)
160 3phh_A Shikimate dehydrogenase 97.8 3.7E-05 1.3E-09 72.4 8.4 106 165-289 118-224 (269)
161 1lss_A TRK system potassium up 97.8 0.0001 3.5E-09 60.8 10.2 95 165-271 4-102 (140)
162 1omo_A Alanine dehydrogenase; 97.8 5.9E-05 2E-09 72.7 9.2 94 164-273 124-218 (322)
163 2qrj_A Saccharopine dehydrogen 97.8 3.2E-05 1.1E-09 76.3 6.7 83 164-272 213-300 (394)
164 3fwz_A Inner membrane protein 97.7 0.0001 3.4E-09 61.9 7.7 93 166-271 8-104 (140)
165 2qyt_A 2-dehydropantoate 2-red 97.7 4.7E-05 1.6E-09 72.3 6.1 115 166-287 9-131 (317)
166 3ghy_A Ketopantoate reductase 97.6 4.7E-05 1.6E-09 73.5 5.7 103 165-274 3-106 (335)
167 3ulk_A Ketol-acid reductoisome 97.6 0.00014 4.9E-09 72.3 9.1 100 161-275 33-134 (491)
168 3hwr_A 2-dehydropantoate 2-red 97.6 0.00012 3.9E-09 70.3 7.9 116 163-286 17-133 (318)
169 3i83_A 2-dehydropantoate 2-red 97.6 0.00012 4.2E-09 70.1 8.0 119 166-292 3-124 (320)
170 3ic5_A Putative saccharopine d 97.6 0.00013 4.6E-09 58.2 7.0 94 164-272 4-100 (118)
171 3c7a_A Octopine dehydrogenase; 97.6 0.00026 9E-09 69.9 10.5 96 166-271 3-115 (404)
172 2a9f_A Putative malic enzyme ( 97.6 0.00019 6.5E-09 70.7 8.9 266 33-347 61-359 (398)
173 2hmt_A YUAA protein; RCK, KTN, 97.6 0.00036 1.2E-08 57.6 9.5 100 163-275 4-107 (144)
174 1nyt_A Shikimate 5-dehydrogena 97.5 0.00038 1.3E-08 65.2 10.6 100 162-275 116-217 (271)
175 3o8q_A Shikimate 5-dehydrogena 97.5 9.5E-05 3.2E-09 70.0 6.4 111 162-288 123-235 (281)
176 3pwz_A Shikimate dehydrogenase 97.5 0.00029 9.8E-09 66.3 9.5 99 161-274 116-217 (272)
177 3jyo_A Quinate/shikimate dehyd 97.5 0.001 3.5E-08 62.9 13.4 106 162-275 124-232 (283)
178 4b4u_A Bifunctional protein fo 97.5 0.00033 1.1E-08 66.5 9.7 77 161-273 175-252 (303)
179 1p77_A Shikimate 5-dehydrogena 97.5 0.00017 5.8E-09 67.7 7.6 105 162-280 116-222 (272)
180 3llv_A Exopolyphosphatase-rela 97.5 0.00031 1E-08 58.6 8.4 95 164-271 5-103 (141)
181 3zwc_A Peroxisomal bifunctiona 97.5 0.0006 2.1E-08 72.7 12.5 147 166-322 317-471 (742)
182 3tnl_A Shikimate dehydrogenase 97.5 0.00065 2.2E-08 65.3 11.4 107 161-275 150-266 (315)
183 2ewd_A Lactate dehydrogenase,; 97.4 0.00027 9.3E-09 67.7 7.9 117 165-286 4-135 (317)
184 2ho3_A Oxidoreductase, GFO/IDH 97.4 0.00055 1.9E-08 65.5 10.0 68 167-246 3-72 (325)
185 3c1a_A Putative oxidoreductase 97.4 0.00039 1.3E-08 66.3 8.8 107 166-292 11-122 (315)
186 3hn2_A 2-dehydropantoate 2-red 97.4 0.00061 2.1E-08 64.9 10.1 120 166-294 3-124 (312)
187 3euw_A MYO-inositol dehydrogen 97.4 0.00047 1.6E-08 66.5 9.4 69 166-247 5-76 (344)
188 3vtf_A UDP-glucose 6-dehydroge 97.4 0.001 3.5E-08 66.8 11.8 148 164-316 20-193 (444)
189 1pzg_A LDH, lactate dehydrogen 97.4 0.00076 2.6E-08 65.2 10.4 81 165-248 9-92 (331)
190 3fbt_A Chorismate mutase and s 97.3 0.00089 3E-08 63.3 10.3 108 162-289 119-230 (282)
191 2dvm_A Malic enzyme, 439AA lon 97.3 0.00031 1.1E-08 70.4 7.4 162 161-345 182-364 (439)
192 3t4e_A Quinate/shikimate dehyd 97.3 0.0011 3.9E-08 63.4 11.0 81 161-247 144-231 (312)
193 3uuw_A Putative oxidoreductase 97.3 0.0012 4E-08 62.6 11.0 108 166-291 7-118 (308)
194 4fgw_A Glycerol-3-phosphate de 97.3 0.00053 1.8E-08 67.8 8.2 107 167-275 36-154 (391)
195 3evn_A Oxidoreductase, GFO/IDH 97.3 0.0013 4.4E-08 63.1 10.6 69 166-246 6-77 (329)
196 1id1_A Putative potassium chan 97.3 0.00056 1.9E-08 58.0 7.2 100 165-273 3-106 (153)
197 1tlt_A Putative oxidoreductase 97.2 0.0015 5E-08 62.3 10.8 110 166-293 6-119 (319)
198 2glx_A 1,5-anhydro-D-fructose 97.2 0.0013 4.5E-08 62.8 10.3 107 167-291 2-114 (332)
199 4hkt_A Inositol 2-dehydrogenas 97.2 0.0019 6.4E-08 61.9 11.3 68 166-247 4-74 (331)
200 1iuk_A Hypothetical protein TT 97.2 0.00082 2.8E-08 56.7 7.6 104 164-292 12-119 (140)
201 3e9m_A Oxidoreductase, GFO/IDH 97.2 0.002 6.7E-08 61.8 11.1 70 166-247 6-78 (330)
202 3dfz_A SIRC, precorrin-2 dehyd 97.2 0.00079 2.7E-08 61.5 7.8 98 159-273 25-122 (223)
203 3bio_A Oxidoreductase, GFO/IDH 97.2 0.00063 2.2E-08 64.8 7.3 104 166-290 10-117 (304)
204 1guz_A Malate dehydrogenase; o 97.2 0.0011 3.8E-08 63.3 8.9 78 166-246 1-79 (310)
205 2v6b_A L-LDH, L-lactate dehydr 97.2 0.00099 3.4E-08 63.5 8.4 121 166-294 1-138 (304)
206 1nvt_A Shikimate 5'-dehydrogen 97.1 0.0009 3.1E-08 63.1 8.0 116 162-288 125-244 (287)
207 3cea_A MYO-inositol 2-dehydrog 97.1 0.0022 7.4E-08 61.6 10.8 111 166-293 9-126 (346)
208 2d59_A Hypothetical protein PH 97.1 0.0011 3.7E-08 56.2 7.6 101 165-292 22-126 (144)
209 3db2_A Putative NADPH-dependen 97.1 0.0021 7.1E-08 62.2 10.6 69 166-248 6-78 (354)
210 2hjr_A Malate dehydrogenase; m 97.1 0.0019 6.4E-08 62.3 9.9 75 166-244 15-90 (328)
211 1hyh_A L-hicdh, L-2-hydroxyiso 97.1 0.002 6.9E-08 61.3 10.0 77 166-247 2-80 (309)
212 3e18_A Oxidoreductase; dehydro 97.1 0.0023 7.8E-08 62.2 10.5 68 166-247 6-76 (359)
213 3ezy_A Dehydrogenase; structur 97.1 0.0025 8.6E-08 61.4 10.6 70 166-247 3-75 (344)
214 1xea_A Oxidoreductase, GFO/IDH 97.0 0.0031 1.1E-07 60.2 10.4 111 166-293 3-117 (323)
215 3e82_A Putative oxidoreductase 97.0 0.0031 1.1E-07 61.4 10.5 67 166-247 8-78 (364)
216 3q2i_A Dehydrogenase; rossmann 97.0 0.0031 1.1E-07 60.9 10.3 69 166-247 14-86 (354)
217 1t2d_A LDH-P, L-lactate dehydr 97.0 0.0029 9.9E-08 60.8 9.9 78 166-247 5-85 (322)
218 2axq_A Saccharopine dehydrogen 96.9 0.0019 6.6E-08 65.3 8.7 101 159-272 17-119 (467)
219 1ldn_A L-lactate dehydrogenase 96.9 0.0025 8.5E-08 61.0 9.0 76 165-247 6-85 (316)
220 1ydw_A AX110P-like protein; st 96.9 0.008 2.7E-07 58.2 12.7 114 166-293 7-125 (362)
221 3l4b_C TRKA K+ channel protien 96.9 0.0024 8.2E-08 57.3 8.3 96 166-273 1-100 (218)
222 3abi_A Putative uncharacterize 96.9 0.0013 4.4E-08 64.1 6.9 93 164-272 15-108 (365)
223 1a5z_A L-lactate dehydrogenase 96.9 0.0018 6E-08 62.2 7.7 104 166-275 1-119 (319)
224 1vlv_A Otcase, ornithine carba 96.9 0.1 3.6E-06 50.0 20.0 106 162-271 164-284 (325)
225 3mz0_A Inositol 2-dehydrogenas 96.9 0.0033 1.1E-07 60.5 9.6 71 166-247 3-77 (344)
226 3g17_A Similar to 2-dehydropan 96.9 0.00024 8.1E-09 67.3 1.2 98 166-277 3-101 (294)
227 1oju_A MDH, malate dehydrogena 96.9 0.0053 1.8E-07 58.2 10.5 110 166-281 1-125 (294)
228 3rc1_A Sugar 3-ketoreductase; 96.9 0.0043 1.5E-07 60.0 10.1 70 165-247 27-100 (350)
229 1pvv_A Otcase, ornithine carba 96.8 0.12 4.1E-06 49.3 19.7 106 162-271 152-270 (315)
230 1duv_G Octase-1, ornithine tra 96.8 0.12 4E-06 49.8 19.5 140 106-271 118-273 (333)
231 3r7f_A Aspartate carbamoyltran 96.8 0.05 1.7E-06 51.7 16.7 147 82-271 88-249 (304)
232 2i6u_A Otcase, ornithine carba 96.8 0.081 2.8E-06 50.4 18.2 139 105-271 112-264 (307)
233 1j5p_A Aspartate dehydrogenase 96.8 0.0027 9.3E-08 58.9 7.7 99 163-290 10-112 (253)
234 3m2t_A Probable dehydrogenase; 96.8 0.0024 8.2E-08 62.0 7.7 69 166-246 6-78 (359)
235 3fef_A Putative glucosidase LP 96.8 0.0038 1.3E-07 62.7 9.2 77 164-246 4-85 (450)
236 3ec7_A Putative dehydrogenase; 96.7 0.0059 2E-07 59.2 10.1 72 165-247 23-98 (357)
237 3ohs_X Trans-1,2-dihydrobenzen 96.7 0.01 3.5E-07 56.7 11.6 69 166-247 3-77 (334)
238 2ef0_A Ornithine carbamoyltran 96.7 0.15 5.3E-06 48.3 19.4 104 162-278 151-270 (301)
239 3ego_A Probable 2-dehydropanto 96.7 0.0011 3.9E-08 63.0 4.6 99 166-275 3-102 (307)
240 1f06_A MESO-diaminopimelate D- 96.7 0.0028 9.5E-08 60.8 7.2 103 166-290 4-110 (320)
241 1obb_A Maltase, alpha-glucosid 96.7 0.0042 1.5E-07 62.9 8.8 128 165-295 3-174 (480)
242 3l9w_A Glutathione-regulated p 96.7 0.0027 9.1E-08 63.2 7.1 96 165-273 4-103 (413)
243 3kux_A Putative oxidoreductase 96.7 0.0048 1.7E-07 59.6 8.8 68 166-248 8-79 (352)
244 3vku_A L-LDH, L-lactate dehydr 96.6 0.0052 1.8E-07 59.2 8.8 110 163-279 7-130 (326)
245 3f4l_A Putative oxidoreductase 96.6 0.0026 8.9E-08 61.3 6.7 69 166-247 3-76 (345)
246 1dxh_A Ornithine carbamoyltran 96.6 0.1 3.5E-06 50.2 17.8 106 162-271 152-273 (335)
247 1h6d_A Precursor form of gluco 96.6 0.0051 1.8E-07 61.4 8.9 113 166-291 84-202 (433)
248 1lld_A L-lactate dehydrogenase 96.6 0.013 4.3E-07 55.6 11.2 107 164-275 6-127 (319)
249 3q2o_A Phosphoribosylaminoimid 96.6 0.0045 1.5E-07 60.6 7.9 39 161-200 10-48 (389)
250 2aef_A Calcium-gated potassium 96.6 0.0066 2.3E-07 54.9 8.5 93 164-271 8-105 (234)
251 3nep_X Malate dehydrogenase; h 96.5 0.0078 2.7E-07 57.7 9.3 105 166-273 1-119 (314)
252 1oth_A Protein (ornithine tran 96.5 0.15 5.2E-06 48.7 18.0 139 105-271 119-270 (321)
253 1jw9_B Molybdopterin biosynthe 96.5 0.003 1E-07 58.4 5.7 101 161-271 27-152 (249)
254 3pqe_A L-LDH, L-lactate dehydr 96.4 0.0079 2.7E-07 57.9 8.5 104 165-273 5-123 (326)
255 3rui_A Ubiquitin-like modifier 96.4 0.018 6.3E-07 55.6 11.0 132 120-272 4-171 (340)
256 1ur5_A Malate dehydrogenase; o 96.4 0.0071 2.4E-07 57.6 7.9 77 166-246 3-80 (309)
257 3tl2_A Malate dehydrogenase; c 96.4 0.012 4.2E-07 56.3 9.6 106 164-273 7-128 (315)
258 2p2s_A Putative oxidoreductase 96.4 0.014 4.7E-07 55.9 9.9 107 166-290 5-117 (336)
259 3ldh_A Lactate dehydrogenase; 96.4 0.0052 1.8E-07 59.3 6.9 105 164-273 20-139 (330)
260 3gd5_A Otcase, ornithine carba 96.4 0.3 1E-05 46.7 19.1 106 162-271 154-272 (323)
261 1pg5_A Aspartate carbamoyltran 96.4 0.069 2.4E-06 50.6 14.5 99 162-271 146-259 (299)
262 4a7p_A UDP-glucose dehydrogena 96.4 0.01 3.5E-07 59.6 9.1 103 160-282 317-430 (446)
263 1u8x_X Maltose-6'-phosphate gl 96.4 0.0079 2.7E-07 60.8 8.4 80 165-246 28-112 (472)
264 4f2g_A Otcase 1, ornithine car 96.3 0.14 4.8E-06 48.7 16.6 101 162-272 151-264 (309)
265 3gvi_A Malate dehydrogenase; N 96.3 0.0093 3.2E-07 57.4 8.4 107 163-273 5-125 (324)
266 3tum_A Shikimate dehydrogenase 96.3 0.005 1.7E-07 57.7 6.2 104 161-274 121-227 (269)
267 3fi9_A Malate dehydrogenase; s 96.3 0.0074 2.5E-07 58.5 7.5 77 163-245 6-85 (343)
268 1ff9_A Saccharopine reductase; 96.3 0.0074 2.5E-07 60.6 7.7 75 164-247 2-79 (450)
269 2i6t_A Ubiquitin-conjugating e 96.2 0.0055 1.9E-07 58.4 6.1 98 165-273 14-126 (303)
270 1npy_A Hypothetical shikimate 96.2 0.021 7.3E-07 53.4 10.0 104 164-288 118-227 (271)
271 2w37_A Ornithine carbamoyltran 96.2 0.24 8.1E-06 48.1 17.6 139 105-271 140-294 (359)
272 3fhl_A Putative oxidoreductase 96.2 0.0071 2.4E-07 58.7 6.9 66 166-246 6-75 (362)
273 1s6y_A 6-phospho-beta-glucosid 96.2 0.014 4.8E-07 58.6 9.1 81 165-247 7-94 (450)
274 3p7m_A Malate dehydrogenase; p 96.2 0.019 6.4E-07 55.1 9.5 110 164-279 4-127 (321)
275 4had_A Probable oxidoreductase 96.1 0.014 4.7E-07 56.1 8.5 68 167-246 25-96 (350)
276 3moi_A Probable dehydrogenase; 96.1 0.018 6E-07 56.4 9.4 69 166-247 3-75 (387)
277 4a8p_A Putrescine carbamoyltra 96.1 0.67 2.3E-05 44.8 20.2 105 162-271 150-269 (355)
278 4a8t_A Putrescine carbamoyltra 96.1 0.5 1.7E-05 45.4 19.2 105 162-271 172-291 (339)
279 3gdo_A Uncharacterized oxidore 96.1 0.0077 2.6E-07 58.4 6.5 68 166-248 6-77 (358)
280 3d0o_A L-LDH 1, L-lactate dehy 96.0 0.027 9.2E-07 53.8 9.9 105 165-273 6-124 (317)
281 3dty_A Oxidoreductase, GFO/IDH 96.0 0.018 6.3E-07 56.5 9.0 73 165-247 12-96 (398)
282 3qy9_A DHPR, dihydrodipicolina 96.0 0.013 4.3E-07 54.1 7.3 81 166-274 4-85 (243)
283 1u8f_O GAPDH, glyceraldehyde-3 96.0 0.012 4.1E-07 56.8 7.5 104 166-274 4-124 (335)
284 4h31_A Otcase, ornithine carba 96.0 0.5 1.7E-05 45.8 18.9 107 161-271 177-299 (358)
285 1ml4_A Aspartate transcarbamoy 96.0 0.13 4.6E-06 48.9 14.5 102 162-271 152-267 (308)
286 1pjq_A CYSG, siroheme synthase 96.0 0.0088 3E-07 60.2 6.6 42 161-203 8-49 (457)
287 3aog_A Glutamate dehydrogenase 96.0 0.05 1.7E-06 54.3 11.9 117 161-292 231-358 (440)
288 3i23_A Oxidoreductase, GFO/IDH 96.0 0.021 7.2E-07 55.0 9.1 70 166-247 3-76 (349)
289 2nu8_A Succinyl-COA ligase [AD 96.0 0.016 5.6E-07 54.6 8.1 105 165-291 7-116 (288)
290 2vt3_A REX, redox-sensing tran 96.0 0.005 1.7E-07 55.8 4.3 68 166-246 86-155 (215)
291 1y6j_A L-lactate dehydrogenase 96.0 0.014 4.8E-07 55.9 7.7 74 165-246 7-84 (318)
292 3nv9_A Malic enzyme; rossmann 96.0 0.098 3.4E-06 52.2 13.8 173 108-322 186-367 (487)
293 3tpf_A Otcase, ornithine carba 96.0 0.59 2E-05 44.4 18.8 113 162-278 142-271 (307)
294 3e8x_A Putative NAD-dependent 96.0 0.013 4.4E-07 52.7 6.9 76 161-247 17-95 (236)
295 3ijr_A Oxidoreductase, short c 96.0 0.021 7.1E-07 53.6 8.6 40 161-201 43-83 (291)
296 3ojo_A CAP5O; rossmann fold, c 95.9 0.023 7.9E-07 56.7 9.3 87 162-275 312-409 (431)
297 4ep1_A Otcase, ornithine carba 95.9 0.18 6.2E-06 48.5 15.2 156 88-272 127-294 (340)
298 1yqd_A Sinapyl alcohol dehydro 95.9 0.0097 3.3E-07 57.8 6.3 95 164-274 187-284 (366)
299 4amu_A Ornithine carbamoyltran 95.9 0.13 4.6E-06 49.9 14.2 155 88-271 128-299 (365)
300 1rjw_A ADH-HT, alcohol dehydro 95.9 0.017 6E-07 55.3 8.0 96 164-274 164-263 (339)
301 1ez4_A Lactate dehydrogenase; 95.9 0.019 6.6E-07 54.9 8.2 103 166-273 6-122 (318)
302 2we8_A Xanthine dehydrogenase; 95.9 0.016 5.5E-07 57.0 7.8 97 164-295 203-302 (386)
303 1zud_1 Adenylyltransferase THI 95.9 0.013 4.5E-07 54.1 6.7 105 161-271 24-149 (251)
304 2zqz_A L-LDH, L-lactate dehydr 95.9 0.02 6.8E-07 55.0 8.2 108 165-279 9-130 (326)
305 1zh8_A Oxidoreductase; TM0312, 95.9 0.055 1.9E-06 51.9 11.3 69 166-246 19-92 (340)
306 1hdg_O Holo-D-glyceraldehyde-3 95.9 0.013 4.3E-07 56.6 6.7 32 166-197 1-34 (332)
307 2cdc_A Glucose dehydrogenase g 95.9 0.0078 2.7E-07 58.4 5.3 95 162-273 178-279 (366)
308 4gsl_A Ubiquitin-like modifier 95.8 0.029 9.9E-07 58.2 9.7 142 110-272 285-463 (615)
309 2d8a_A PH0655, probable L-thre 95.8 0.011 3.7E-07 56.9 6.3 95 164-273 167-268 (348)
310 3ip1_A Alcohol dehydrogenase, 95.8 0.035 1.2E-06 54.5 10.1 101 163-273 212-319 (404)
311 3gg2_A Sugar dehydrogenase, UD 95.8 0.027 9.1E-07 56.6 9.3 98 160-275 313-421 (450)
312 1b7g_O Protein (glyceraldehyde 95.8 0.032 1.1E-06 53.9 9.4 80 167-247 3-88 (340)
313 2tmg_A Protein (glutamate dehy 95.8 0.12 4E-06 51.3 13.5 117 160-291 204-332 (415)
314 1lu9_A Methylene tetrahydromet 95.8 0.017 5.9E-07 54.1 7.2 39 162-201 116-155 (287)
315 3u3x_A Oxidoreductase; structu 95.8 0.058 2E-06 52.2 11.2 69 165-246 26-98 (361)
316 4f3y_A DHPR, dihydrodipicolina 95.8 0.019 6.4E-07 53.8 7.4 96 166-274 8-106 (272)
317 3vh1_A Ubiquitin-like modifier 95.7 0.016 5.6E-07 59.9 7.4 107 161-272 323-464 (598)
318 1pqw_A Polyketide synthase; ro 95.7 0.013 4.5E-07 51.3 5.9 95 164-274 38-139 (198)
319 4fb5_A Probable oxidoreductase 95.7 0.018 6.1E-07 55.7 7.2 68 166-246 26-104 (393)
320 4ew6_A D-galactose-1-dehydroge 95.7 0.015 5E-07 55.8 6.4 62 165-246 25-91 (330)
321 1cdo_A Alcohol dehydrogenase; 95.6 0.06 2.1E-06 52.1 10.7 96 163-273 191-295 (374)
322 2czc_A Glyceraldehyde-3-phosph 95.6 0.019 6.6E-07 55.3 7.0 78 167-247 4-90 (334)
323 3g79_A NDP-N-acetyl-D-galactos 95.6 0.023 7.9E-07 57.5 7.9 98 161-282 349-458 (478)
324 4gqa_A NAD binding oxidoreduct 95.6 0.02 6.8E-07 56.4 7.3 70 166-247 27-107 (412)
325 3r6d_A NAD-dependent epimerase 95.6 0.0095 3.2E-07 53.0 4.5 101 166-276 6-111 (221)
326 3btv_A Galactose/lactose metab 95.6 0.031 1E-06 55.8 8.7 71 166-246 21-99 (438)
327 2nvw_A Galactose/lactose metab 95.6 0.056 1.9E-06 54.6 10.7 71 166-246 40-118 (479)
328 3s2e_A Zinc-containing alcohol 95.6 0.021 7.3E-07 54.6 7.1 96 163-273 165-264 (340)
329 1lc0_A Biliverdin reductase A; 95.6 0.03 1E-06 52.7 8.0 103 166-292 8-118 (294)
330 2d4a_B Malate dehydrogenase; a 95.5 0.017 5.8E-07 55.0 6.2 76 167-246 1-77 (308)
331 3k92_A NAD-GDH, NAD-specific g 95.5 0.14 4.9E-06 50.8 13.0 114 161-291 217-342 (424)
332 1piw_A Hypothetical zinc-type 95.5 0.017 5.8E-07 55.8 6.3 97 164-273 179-277 (360)
333 3qvo_A NMRA family protein; st 95.5 0.023 7.9E-07 51.2 6.8 102 163-276 21-128 (236)
334 1hdo_A Biliverdin IX beta redu 95.5 0.072 2.5E-06 46.1 9.8 73 165-247 3-78 (206)
335 1oi7_A Succinyl-COA synthetase 95.5 0.022 7.6E-07 53.7 6.9 105 165-291 7-116 (288)
336 2xxj_A L-LDH, L-lactate dehydr 95.5 0.029 9.8E-07 53.5 7.6 103 166-273 1-117 (310)
337 3cmc_O GAPDH, glyceraldehyde-3 95.5 0.017 5.7E-07 55.8 5.9 32 167-198 3-34 (334)
338 2jhf_A Alcohol dehydrogenase E 95.5 0.06 2.1E-06 52.1 10.0 95 164-273 191-294 (374)
339 3v2g_A 3-oxoacyl-[acyl-carrier 95.4 0.029 9.9E-07 52.0 7.3 108 161-273 27-166 (271)
340 4aj2_A L-lactate dehydrogenase 95.4 0.031 1E-06 53.9 7.6 105 162-273 16-137 (331)
341 3on5_A BH1974 protein; structu 95.4 0.027 9.2E-07 54.9 7.2 134 165-348 199-345 (362)
342 3do5_A HOM, homoserine dehydro 95.4 0.036 1.2E-06 53.3 8.0 117 166-291 3-135 (327)
343 2dt5_A AT-rich DNA-binding pro 95.4 0.011 3.8E-07 53.3 4.1 67 166-246 81-150 (211)
344 3orq_A N5-carboxyaminoimidazol 95.4 0.012 4.2E-07 57.4 4.8 38 162-200 9-46 (377)
345 3v5n_A Oxidoreductase; structu 95.4 0.13 4.3E-06 50.9 12.2 72 166-247 38-121 (417)
346 1e3i_A Alcohol dehydrogenase, 95.4 0.073 2.5E-06 51.6 10.2 95 164-273 195-298 (376)
347 4fcc_A Glutamate dehydrogenase 95.4 0.091 3.1E-06 52.5 10.9 119 161-292 231-368 (450)
348 1kyq_A Met8P, siroheme biosynt 95.3 0.0094 3.2E-07 56.0 3.6 39 161-200 9-47 (274)
349 3cps_A Glyceraldehyde 3-phosph 95.3 0.045 1.5E-06 53.2 8.5 100 166-273 18-139 (354)
350 1e3j_A NADP(H)-dependent ketos 95.3 0.067 2.3E-06 51.4 9.8 96 164-274 168-273 (352)
351 3h2s_A Putative NADH-flavin re 95.3 0.072 2.5E-06 47.0 9.3 97 166-274 1-106 (224)
352 3lk7_A UDP-N-acetylmuramoylala 95.3 0.014 4.7E-07 58.5 5.0 120 162-290 6-138 (451)
353 3hhp_A Malate dehydrogenase; M 95.3 0.075 2.6E-06 50.7 9.9 109 166-283 1-127 (312)
354 3tqh_A Quinone oxidoreductase; 95.3 0.026 9.1E-07 53.5 6.7 94 163-273 151-246 (321)
355 2fzw_A Alcohol dehydrogenase c 95.3 0.064 2.2E-06 51.9 9.6 95 164-273 190-293 (373)
356 3k31_A Enoyl-(acyl-carrier-pro 95.3 0.033 1.1E-06 52.2 7.3 39 161-200 26-67 (296)
357 3d6n_B Aspartate carbamoyltran 95.3 0.5 1.7E-05 44.5 15.3 119 88-246 92-214 (291)
358 1pl8_A Human sorbitol dehydrog 95.3 0.044 1.5E-06 52.8 8.3 96 164-274 171-275 (356)
359 4ej6_A Putative zinc-binding d 95.3 0.028 9.7E-07 54.6 7.0 95 164-273 182-285 (370)
360 1p0f_A NADP-dependent alcohol 95.3 0.066 2.3E-06 51.8 9.5 95 164-273 191-294 (373)
361 3r3s_A Oxidoreductase; structu 95.2 0.055 1.9E-06 50.7 8.7 39 161-200 45-84 (294)
362 1mld_A Malate dehydrogenase; o 95.2 0.087 3E-06 50.2 10.1 105 166-281 1-124 (314)
363 2dq4_A L-threonine 3-dehydroge 95.2 0.028 9.5E-07 53.9 6.6 94 164-273 164-263 (343)
364 2y0c_A BCEC, UDP-glucose dehyd 95.2 0.15 5.2E-06 51.4 12.4 109 160-280 323-445 (478)
365 3ijp_A DHPR, dihydrodipicolina 95.2 0.05 1.7E-06 51.3 8.2 98 166-274 22-121 (288)
366 1cf2_P Protein (glyceraldehyde 95.2 0.022 7.5E-07 55.0 5.8 76 167-247 3-89 (337)
367 3two_A Mannitol dehydrogenase; 95.2 0.024 8.2E-07 54.4 6.1 92 164-274 176-267 (348)
368 3grf_A Ornithine carbamoyltran 95.2 0.79 2.7E-05 43.9 16.5 165 88-272 102-283 (328)
369 1gad_O D-glyceraldehyde-3-phos 95.2 0.032 1.1E-06 53.7 6.8 32 167-198 3-34 (330)
370 1uuf_A YAHK, zinc-type alcohol 95.1 0.019 6.6E-07 55.8 5.3 93 164-273 194-289 (369)
371 2hcy_A Alcohol dehydrogenase 1 95.1 0.043 1.5E-06 52.6 7.7 95 164-273 169-270 (347)
372 3is3_A 17BETA-hydroxysteroid d 95.1 0.034 1.1E-06 51.3 6.7 110 161-275 14-155 (270)
373 2yfq_A Padgh, NAD-GDH, NAD-spe 95.1 0.069 2.4E-06 53.0 9.3 117 161-292 208-340 (421)
374 2pd4_A Enoyl-[acyl-carrier-pro 95.1 0.024 8.2E-07 52.4 5.7 38 162-200 3-43 (275)
375 3e5r_O PP38, glyceraldehyde-3- 95.1 0.029 1E-06 54.2 6.4 31 167-197 5-35 (337)
376 4eye_A Probable oxidoreductase 95.1 0.031 1.1E-06 53.6 6.6 94 163-273 158-258 (342)
377 1ys4_A Aspartate-semialdehyde 95.1 0.018 6.2E-07 55.9 4.9 101 166-273 9-115 (354)
378 1zq6_A Otcase, ornithine carba 95.1 1.2 4.2E-05 43.0 17.7 138 105-271 153-314 (359)
379 1xyg_A Putative N-acetyl-gamma 95.1 0.054 1.9E-06 52.7 8.3 98 164-273 15-113 (359)
380 4b7c_A Probable oxidoreductase 95.1 0.024 8.2E-07 54.0 5.7 97 163-274 148-250 (336)
381 3grk_A Enoyl-(acyl-carrier-pro 95.1 0.052 1.8E-06 50.8 7.9 39 161-200 27-68 (293)
382 3o9z_A Lipopolysaccaride biosy 95.1 0.034 1.2E-06 52.8 6.7 67 166-246 4-82 (312)
383 2fp4_A Succinyl-COA ligase [GD 95.0 0.066 2.3E-06 50.9 8.6 106 161-289 9-121 (305)
384 3uko_A Alcohol dehydrogenase c 95.0 0.06 2E-06 52.3 8.5 96 163-273 192-296 (378)
385 3ew7_A LMO0794 protein; Q8Y8U8 95.0 0.069 2.4E-06 46.8 8.1 96 166-274 1-104 (221)
386 1iz0_A Quinone oxidoreductase; 95.0 0.024 8.3E-07 53.2 5.3 93 164-273 125-219 (302)
387 4dup_A Quinone oxidoreductase; 95.0 0.031 1.1E-06 53.9 6.1 95 163-273 166-266 (353)
388 3oig_A Enoyl-[acyl-carrier-pro 95.0 0.078 2.7E-06 48.5 8.6 38 162-200 4-44 (266)
389 4fs3_A Enoyl-[acyl-carrier-pro 95.0 0.087 3E-06 48.3 8.9 39 162-201 3-44 (256)
390 1v3u_A Leukotriene B4 12- hydr 94.9 0.046 1.6E-06 52.0 7.3 95 163-273 144-245 (333)
391 3oqb_A Oxidoreductase; structu 94.9 0.089 3E-06 51.1 9.4 70 166-247 7-94 (383)
392 3keo_A Redox-sensing transcrip 94.9 0.021 7.3E-07 51.5 4.4 71 165-247 84-159 (212)
393 4h3v_A Oxidoreductase domain p 94.9 0.034 1.2E-06 53.7 6.2 70 166-247 7-86 (390)
394 2yyy_A Glyceraldehyde-3-phosph 94.8 0.035 1.2E-06 53.7 6.1 31 166-196 3-33 (343)
395 3uog_A Alcohol dehydrogenase; 94.8 0.043 1.5E-06 53.1 6.7 95 163-273 188-288 (363)
396 3pxx_A Carveol dehydrogenase; 94.8 0.068 2.3E-06 49.3 7.8 37 161-198 6-43 (287)
397 2nqt_A N-acetyl-gamma-glutamyl 94.8 0.11 3.9E-06 50.3 9.6 102 166-282 10-120 (352)
398 2ozp_A N-acetyl-gamma-glutamyl 94.8 0.047 1.6E-06 52.8 6.9 95 166-273 5-100 (345)
399 4ina_A Saccharopine dehydrogen 94.8 0.03 1E-06 55.4 5.5 78 166-246 2-86 (405)
400 1f8f_A Benzyl alcohol dehydrog 94.8 0.038 1.3E-06 53.5 6.2 95 164-273 190-290 (371)
401 3fpc_A NADP-dependent alcohol 94.7 0.043 1.5E-06 52.7 6.5 95 164-273 166-267 (352)
402 3eag_A UDP-N-acetylmuramate:L- 94.7 0.068 2.3E-06 51.1 7.6 115 165-290 4-134 (326)
403 1b8p_A Protein (malate dehydro 94.7 0.15 5E-06 48.9 10.0 102 166-273 6-134 (329)
404 1rm4_O Glyceraldehyde 3-phosph 94.7 0.05 1.7E-06 52.5 6.6 30 167-196 3-34 (337)
405 2ixa_A Alpha-N-acetylgalactosa 94.7 0.088 3E-06 52.4 8.7 74 166-246 21-101 (444)
406 2p91_A Enoyl-[acyl-carrier-pro 94.6 0.082 2.8E-06 49.0 8.0 38 162-200 18-58 (285)
407 1smk_A Malate dehydrogenase, g 94.6 0.098 3.4E-06 50.1 8.6 73 165-246 8-86 (326)
408 3dhn_A NAD-dependent epimerase 94.5 0.064 2.2E-06 47.5 6.7 71 166-247 5-78 (227)
409 2c0c_A Zinc binding alcohol de 94.5 0.043 1.5E-06 53.0 6.0 94 164-273 163-262 (362)
410 3qwb_A Probable quinone oxidor 94.5 0.049 1.7E-06 51.9 6.2 95 163-273 147-248 (334)
411 2q3e_A UDP-glucose 6-dehydroge 94.5 0.2 7E-06 50.2 11.0 105 162-275 326-445 (467)
412 2cf5_A Atccad5, CAD, cinnamyl 94.4 0.051 1.7E-06 52.4 6.2 94 164-273 180-276 (357)
413 3csu_A Protein (aspartate carb 94.4 0.067 2.3E-06 51.0 6.8 102 162-271 151-266 (310)
414 3ip3_A Oxidoreductase, putativ 94.4 0.037 1.3E-06 52.9 5.1 72 166-246 3-77 (337)
415 2h7i_A Enoyl-[acyl-carrier-pro 94.4 0.042 1.5E-06 50.5 5.3 39 162-201 4-45 (269)
416 3b1j_A Glyceraldehyde 3-phosph 94.3 0.054 1.9E-06 52.3 6.1 31 167-197 4-36 (339)
417 3dqp_A Oxidoreductase YLBE; al 94.3 0.17 5.7E-06 44.6 9.0 71 166-248 1-75 (219)
418 2d2i_A Glyceraldehyde 3-phosph 94.3 0.062 2.1E-06 52.6 6.5 31 167-197 4-36 (380)
419 2x5j_O E4PDH, D-erythrose-4-ph 94.3 0.051 1.7E-06 52.5 5.9 31 167-197 4-37 (339)
420 3jyn_A Quinone oxidoreductase; 94.3 0.047 1.6E-06 51.8 5.6 94 164-273 140-240 (325)
421 1vkn_A N-acetyl-gamma-glutamyl 94.3 0.23 8E-06 48.0 10.5 95 166-274 14-109 (351)
422 1mv8_A GMD, GDP-mannose 6-dehy 94.3 0.14 4.7E-06 51.0 9.1 93 164-271 312-419 (436)
423 2wyu_A Enoyl-[acyl carrier pro 94.3 0.034 1.2E-06 50.9 4.4 38 162-200 5-45 (261)
424 2vn8_A Reticulon-4-interacting 94.3 0.18 6E-06 48.8 9.7 98 163-275 182-283 (375)
425 3aoe_E Glutamate dehydrogenase 94.2 0.32 1.1E-05 48.2 11.5 113 161-292 214-337 (419)
426 1g0o_A Trihydroxynaphthalene r 94.2 0.076 2.6E-06 49.2 6.7 40 161-201 25-65 (283)
427 4e4t_A Phosphoribosylaminoimid 94.2 0.041 1.4E-06 54.6 5.1 39 162-201 32-70 (419)
428 3mtj_A Homoserine dehydrogenas 94.2 0.077 2.6E-06 53.1 7.1 108 166-292 11-131 (444)
429 1qor_A Quinone oxidoreductase; 94.2 0.065 2.2E-06 50.8 6.3 94 164-273 140-240 (327)
430 3gms_A Putative NADPH:quinone 94.2 0.038 1.3E-06 52.8 4.7 95 163-273 143-244 (340)
431 3edm_A Short chain dehydrogena 94.2 0.055 1.9E-06 49.6 5.6 36 162-198 5-41 (259)
432 1nvm_B Acetaldehyde dehydrogen 94.2 0.083 2.8E-06 50.4 6.9 69 166-245 5-80 (312)
433 3ff4_A Uncharacterized protein 94.1 0.073 2.5E-06 43.6 5.6 99 166-292 5-107 (122)
434 2rir_A Dipicolinate synthase, 94.1 0.19 6.4E-06 47.2 9.3 112 162-296 4-125 (300)
435 3vtf_A UDP-glucose 6-dehydroge 94.1 0.16 5.4E-06 50.8 9.1 90 161-274 329-428 (444)
436 1v9l_A Glutamate dehydrogenase 94.1 0.25 8.5E-06 49.0 10.4 119 161-292 206-339 (421)
437 4ekn_B Aspartate carbamoyltran 94.1 0.6 2.1E-05 44.3 12.7 75 162-244 148-226 (306)
438 1qsg_A Enoyl-[acyl-carrier-pro 94.1 0.048 1.6E-06 50.0 4.9 37 162-199 6-45 (265)
439 4gmf_A Yersiniabactin biosynth 94.0 0.047 1.6E-06 53.4 5.1 67 166-247 8-77 (372)
440 3oa2_A WBPB; oxidoreductase, s 94.0 0.074 2.5E-06 50.6 6.3 67 166-246 4-83 (318)
441 2h6e_A ADH-4, D-arabinose 1-de 94.0 0.041 1.4E-06 52.6 4.5 95 164-273 170-270 (344)
442 2x0j_A Malate dehydrogenase; o 94.0 0.13 4.5E-06 48.6 7.8 112 166-282 1-126 (294)
443 3jv7_A ADH-A; dehydrogenase, n 93.9 0.12 4E-06 49.4 7.6 95 163-273 170-271 (345)
444 4g65_A TRK system potassium up 93.9 0.089 3.1E-06 52.9 7.0 72 165-246 3-78 (461)
445 3i6i_A Putative leucoanthocyan 93.9 0.11 3.7E-06 49.4 7.3 36 163-199 8-44 (346)
446 2eih_A Alcohol dehydrogenase; 93.9 0.096 3.3E-06 50.0 6.9 37 164-201 166-203 (343)
447 1lnq_A MTHK channels, potassiu 93.9 0.05 1.7E-06 52.0 4.9 90 165-269 115-208 (336)
448 2o3j_A UDP-glucose 6-dehydroge 93.8 0.29 9.9E-06 49.4 10.6 111 162-282 332-455 (481)
449 2j3h_A NADP-dependent oxidored 93.8 0.073 2.5E-06 50.8 5.9 94 164-273 155-256 (345)
450 3m6i_A L-arabinitol 4-dehydrog 93.8 0.27 9.2E-06 47.2 9.9 95 164-274 179-285 (363)
451 3fbg_A Putative arginate lyase 93.8 0.11 3.6E-06 49.8 6.9 37 164-201 150-187 (346)
452 1vj0_A Alcohol dehydrogenase, 93.7 0.09 3.1E-06 51.1 6.4 37 164-201 195-232 (380)
453 3pi7_A NADH oxidoreductase; gr 93.7 0.17 5.8E-06 48.4 8.3 92 166-273 166-264 (349)
454 1y1p_A ARII, aldehyde reductas 93.7 0.14 4.8E-06 48.0 7.6 82 162-246 8-93 (342)
455 4dqx_A Probable oxidoreductase 93.7 0.086 2.9E-06 48.9 6.0 41 160-201 22-63 (277)
456 3upl_A Oxidoreductase; rossman 93.7 0.15 5E-06 51.1 7.9 121 166-293 24-161 (446)
457 3t7c_A Carveol dehydrogenase; 93.7 0.12 4.1E-06 48.3 7.0 39 159-198 22-61 (299)
458 1dih_A Dihydrodipicolinate red 93.7 0.046 1.6E-06 51.1 4.0 74 166-245 6-81 (273)
459 3h9e_O Glyceraldehyde-3-phosph 93.6 0.074 2.5E-06 51.3 5.5 44 166-210 8-52 (346)
460 1ja9_A 4HNR, 1,3,6,8-tetrahydr 93.6 0.039 1.3E-06 50.5 3.4 36 162-198 18-54 (274)
461 1wly_A CAAR, 2-haloacrylate re 93.6 0.1 3.4E-06 49.6 6.5 36 164-200 145-181 (333)
462 2yv1_A Succinyl-COA ligase [AD 93.6 0.075 2.5E-06 50.2 5.4 104 166-291 14-122 (294)
463 3gpi_A NAD-dependent epimerase 93.6 0.043 1.5E-06 50.6 3.7 36 164-200 2-37 (286)
464 2ph5_A Homospermidine synthase 93.5 0.34 1.2E-05 48.7 10.3 34 166-199 14-50 (480)
465 1xq6_A Unknown protein; struct 93.5 0.1 3.5E-06 46.6 6.0 73 163-246 2-79 (253)
466 2ep5_A 350AA long hypothetical 93.5 0.11 3.6E-06 50.4 6.4 99 166-273 5-109 (350)
467 2zb4_A Prostaglandin reductase 93.4 0.11 3.9E-06 49.8 6.4 94 164-273 158-261 (357)
468 2z1m_A GDP-D-mannose dehydrata 93.4 0.082 2.8E-06 49.7 5.4 36 164-200 2-38 (345)
469 3sc4_A Short chain dehydrogena 93.4 0.11 3.9E-06 48.2 6.2 38 162-200 6-44 (285)
470 1js1_X Transcarbamylase; alpha 93.3 3.2 0.00011 39.5 16.4 102 106-245 132-238 (324)
471 2dph_A Formaldehyde dismutase; 93.3 0.11 3.7E-06 50.8 6.3 99 164-274 185-301 (398)
472 1o6z_A MDH, malate dehydrogena 93.3 0.3 1E-05 46.1 9.2 101 166-273 1-120 (303)
473 2j8z_A Quinone oxidoreductase; 93.3 0.1 3.5E-06 50.1 6.0 37 164-201 162-199 (354)
474 3dr3_A N-acetyl-gamma-glutamyl 93.3 0.12 4.1E-06 49.9 6.4 98 166-274 5-108 (337)
475 2ejw_A HDH, homoserine dehydro 93.3 0.073 2.5E-06 51.2 4.8 102 166-289 4-116 (332)
476 2x9g_A PTR1, pteridine reducta 93.2 0.11 3.6E-06 48.3 5.8 38 161-199 19-57 (288)
477 3r3j_A Glutamate dehydrogenase 93.2 0.57 1.9E-05 46.8 11.1 120 161-291 235-372 (456)
478 1yb5_A Quinone oxidoreductase; 93.1 0.19 6.5E-06 48.3 7.6 37 164-201 170-207 (351)
479 3u5t_A 3-oxoacyl-[acyl-carrier 93.1 0.044 1.5E-06 50.6 2.9 38 161-199 23-61 (267)
480 1kol_A Formaldehyde dehydrogen 93.1 0.15 5.1E-06 49.7 6.9 100 164-273 185-301 (398)
481 2gas_A Isoflavone reductase; N 93.1 0.23 7.7E-06 46.0 7.8 76 165-246 2-86 (307)
482 1qyc_A Phenylcoumaran benzylic 93.1 0.2 6.9E-06 46.3 7.5 77 165-246 4-87 (308)
483 3ksu_A 3-oxoacyl-acyl carrier 93.1 0.077 2.6E-06 48.7 4.5 38 161-199 7-45 (262)
484 2a4k_A 3-oxoacyl-[acyl carrier 93.0 0.14 4.9E-06 46.9 6.3 39 162-201 3-42 (263)
485 4dmm_A 3-oxoacyl-[acyl-carrier 93.0 0.085 2.9E-06 48.7 4.8 40 161-201 24-64 (269)
486 2yfk_A Aspartate/ornithine car 93.0 0.33 1.1E-05 48.1 9.1 78 163-244 186-271 (418)
487 2g82_O GAPDH, glyceraldehyde-3 93.0 0.083 2.8E-06 50.8 4.7 30 167-197 2-31 (331)
488 3ius_A Uncharacterized conserv 93.0 0.12 4.1E-06 47.4 5.7 70 165-247 5-74 (286)
489 2b5w_A Glucose dehydrogenase; 93.0 0.087 3E-06 50.7 4.9 94 163-273 171-274 (357)
490 1xgk_A Nitrogen metabolite rep 93.0 0.055 1.9E-06 52.1 3.5 104 164-275 4-115 (352)
491 3c8m_A Homoserine dehydrogenas 92.9 0.13 4.3E-06 49.5 5.9 116 166-290 7-140 (331)
492 3oh8_A Nucleoside-diphosphate 92.8 0.15 5.1E-06 51.7 6.6 64 165-246 147-211 (516)
493 2gdz_A NAD+-dependent 15-hydro 92.8 0.16 5.6E-06 46.3 6.3 39 162-201 4-43 (267)
494 3gqv_A Enoyl reductase; medium 92.8 0.41 1.4E-05 46.2 9.5 94 163-272 163-263 (371)
495 2x5o_A UDP-N-acetylmuramoylala 92.6 0.15 5.1E-06 50.7 6.2 114 163-289 3-129 (439)
496 2bka_A CC3, TAT-interacting pr 92.6 0.082 2.8E-06 47.3 3.9 77 163-247 16-95 (242)
497 3mw9_A GDH 1, glutamate dehydr 92.6 0.54 1.9E-05 47.4 10.1 115 162-291 241-365 (501)
498 3h8v_A Ubiquitin-like modifier 92.6 0.3 1E-05 46.0 7.9 38 161-199 32-70 (292)
499 4da9_A Short-chain dehydrogena 92.5 0.21 7.1E-06 46.3 6.6 40 161-201 25-65 (280)
500 4h7p_A Malate dehydrogenase; s 92.5 0.41 1.4E-05 46.2 8.8 114 163-283 22-159 (345)
No 1
>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}
Probab=100.00 E-value=5.4e-69 Score=527.87 Aligned_cols=319 Identities=27% Similarity=0.420 Sum_probs=285.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHh-hccCCcEEE
Q 016620 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKAFS 91 (386)
Q Consensus 13 ~~~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l-~~l~~k~i~ 91 (386)
++++|||++.+++++. .+.|++. +++++.. .+...+.+++.+.+. ++|++++...+++++++++++ ++| |+|+
T Consensus 26 ~~~~kvlv~~~~~~~~-~~~l~~~-~~v~~~~-~~~~~~~~~l~~~~~-~~d~li~~~~~~i~~~~l~~~~~~L--k~I~ 99 (345)
T 4g2n_A 26 HPIQKAFLCRRFTPAI-EAELRQR-FDLEVNL-EDTVLTPSGIASRAH-GAEVLFVTATEAITAEVIRKLQPGL--KTIA 99 (345)
T ss_dssp -CCCEEEESSCCCHHH-HHHHHHH-SEEEECT-TCCCCCHHHHHHHTT-TCSEEEECTTSCBCHHHHHHTTTTC--CEEE
T ss_pred CCCCEEEEeCCCCHHH-HHHHHcc-CCEEEec-CCCCCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHHhhcCCc--eEEE
Confidence 5688999999998754 6777665 4665432 334568999998887 599999987788999999998 677 9999
Q ss_pred EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016620 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (386)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIv 171 (386)
+.|+|+|+||+++|+++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..|.+....|++++|+|||||
T Consensus 100 ~~~~G~D~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~r~g~W~~~~~~~~~g~~l~gktvGII 179 (345)
T 4g2n_A 100 TLSVGYDHIDMAAARSLGIKVLHTPDVLSDACAEIAMLLVLNACRRGYEADRMVRSGSWPGWGPTQLLGMGLTGRRLGIF 179 (345)
T ss_dssp ESSSCCTTBCHHHHHHTTCEEECCCSCCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEE
T ss_pred EcCCcccccCHHHHHhCCEEEEECCcccchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccccccCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999888655566899999999999
Q ss_pred ecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhh
Q 016620 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (386)
Q Consensus 172 G~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~ 251 (386)
|+|.||+++|+++ ++|||+|++|||+....... . +.....++++++++||+|++|+|+|++|+
T Consensus 180 GlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~~~-----------~-----g~~~~~~l~ell~~sDvV~l~~Plt~~T~ 242 (345)
T 4g2n_A 180 GMGRIGRAIATRA-RGFGLAIHYHNRTRLSHALE-----------E-----GAIYHDTLDSLLGASDIFLIAAPGRPELK 242 (345)
T ss_dssp SCSHHHHHHHHHH-HTTTCEEEEECSSCCCHHHH-----------T-----TCEECSSHHHHHHTCSEEEECSCCCGGGT
T ss_pred EeChhHHHHHHHH-HHCCCEEEEECCCCcchhhh-----------c-----CCeEeCCHHHHHhhCCEEEEecCCCHHHH
Confidence 9999999999997 79999999999986432110 0 12233599999999999999999999999
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHHH
Q 016620 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (386)
Q Consensus 252 ~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~ 331 (386)
++|+++.|++||+|++|||+|||++||++||+++|++|+|.||+||||++||.+++|||++|||++|||+||+|.+++++
T Consensus 243 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~LDVf~~EP~~~~pL~~~~nvilTPHia~~t~e~~~~ 322 (345)
T 4g2n_A 243 GFLDHDRIAKIPEGAVVINISRGDLINDDALIEALRSKHLFAAGLDVFANEPAIDPRYRSLDNIFLTPHIGSATHETRDA 322 (345)
T ss_dssp TCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECCSCTTCBHHHHHH
T ss_pred HHhCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCceEEEecCCCCCCCCCchHHhCCCEEEcCccCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999996668999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Q 016620 332 MATLAALNVLGKIKGYPIWGNPN 354 (386)
Q Consensus 332 ~~~~~~~ni~~~~~g~~~~~~v~ 354 (386)
+.+.+++||.+|++|+++.|.|+
T Consensus 323 ~~~~~~~ni~~~l~g~~~~~~V~ 345 (345)
T 4g2n_A 323 MGWLLIQGIEALNQSDVPDNLIS 345 (345)
T ss_dssp HHHHHHHHHHHHHTTCCCTTBCC
T ss_pred HHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999875
No 2
>3kb6_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, structural genomics, NPPSFA, NAT project on protein structural and functional analyses; HET: MSE NAD 1PE; 2.12A {Aquifex aeolicus}
Probab=100.00 E-value=2.2e-68 Score=522.41 Aligned_cols=312 Identities=29% Similarity=0.377 Sum_probs=268.3
Q ss_pred cEEEEeCCCCc-hH-HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEc
Q 016620 16 YRVVSTKPMPG-TR-WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (386)
Q Consensus 16 ~~vlvt~~~~~-~~-~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~ 93 (386)
||||++..-.. .. +.+.+.+. .+++........+.+++. ++|+++++..+++++++++++|+| |+|++.
T Consensus 1 Mkil~~~~~~~~~p~~~e~l~~~--~~~~~~~~~~~~~~~~l~-----~ad~i~v~~~~~i~~~~l~~~p~L--k~I~~~ 71 (334)
T 3kb6_A 1 MNVLFTSVPQEDVPFYQEALKDL--SLKIYTTDVSKVPENELK-----KAELISVFVYDKLTEELLSKMPRL--KLIHTR 71 (334)
T ss_dssp -CEEECSCCTTHHHHHHHHTTTS--CEEECSSCGGGSCHHHHH-----HCSEEEECTTSCBCHHHHHTCTTC--CEEEES
T ss_pred CEEEEeCCCcccCHHHHHHHHhC--CcEEEeCCcccCCHHHhc-----CCCEEEEeCCCCCCHHHHhcCCCC--cEEEEC
Confidence 78888653222 12 33444444 344444433334555553 489999988889999999999998 999999
Q ss_pred cccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016620 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (386)
Q Consensus 94 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~ 173 (386)
|+|+|+||+++|+++||.|+|+||+++.+||||+++++|++.|++..+++.++++.|..|. ...|++++|+|+||||+
T Consensus 72 ~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~r~~~~~~~~~~~~~~~~~~--~~~~~~l~g~tvGIiG~ 149 (334)
T 3kb6_A 72 SVGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFSQDS--EILARELNRLTLGVIGT 149 (334)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCG--GGCBCCGGGSEEEEECC
T ss_pred CcccchhcHHHHHHCCCEEEECCCcCcHHHHHHHHHHHHHHhhcccccccccccccccccc--ccccceecCcEEEEECc
Confidence 9999999999999999999999999999999999999999999999999999999986553 34678999999999999
Q ss_pred ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhc
Q 016620 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (386)
Q Consensus 174 G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~l 253 (386)
|.||+.+|+++ ++|||+|++||++....... . .....+++|++++||+|++|||+|++|+++
T Consensus 150 G~IG~~va~~~-~~fg~~v~~~d~~~~~~~~~-----------~------~~~~~~l~ell~~sDivslh~Plt~~T~~l 211 (334)
T 3kb6_A 150 GRIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------K------GCVYTSLDELLKESDVISLHVPYTKETHHM 211 (334)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------T------TCEECCHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred chHHHHHHHhh-cccCceeeecCCccchhhhh-----------c------CceecCHHHHHhhCCEEEEcCCCChhhccC
Confidence 99999999997 79999999999986543211 1 113579999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-C---------------CCCCCCCeEE
Q 016620 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-P---------------GLSEMKNAIV 317 (386)
Q Consensus 254 i~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~---------------~L~~~~nvil 317 (386)
||++.|++||+|++|||+|||++|||+||++||++|+|+||+||||++||++. + |||++|||++
T Consensus 212 i~~~~l~~mk~~a~lIN~aRG~iVde~aL~~aL~~g~i~gA~LDV~~~EPl~~~~~~~~~~~~~~~~~~~~L~~~~nvil 291 (334)
T 3kb6_A 212 INEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVII 291 (334)
T ss_dssp BCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEE
T ss_pred cCHHHHhhcCCCeEEEecCccccccHHHHHHHHHhCCceEEEEeCCCCCCCcccccccccccccccccchhhccCCCEEE
Confidence 99999999999999999999999999999999999999999999999999742 1 5899999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC
Q 016620 318 VPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQV 356 (386)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~ 356 (386)
|||+||+|.++++++.+.+++||.+|++|++....+|.+
T Consensus 292 TPHia~~T~ea~~~~~~~~~~ni~~~l~Ge~~~~~~n~v 330 (334)
T 3kb6_A 292 TPHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGNFV 330 (334)
T ss_dssp CCSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGGEE
T ss_pred CCchhhChHHHHHHHHHHHHHHHHHHHcCCCCcCCCCcC
Confidence 999999999999999999999999999999887777754
No 3
>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*
Probab=100.00 E-value=7.1e-67 Score=511.15 Aligned_cols=319 Identities=29% Similarity=0.432 Sum_probs=284.8
Q ss_pred CCcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEc
Q 016620 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (386)
Q Consensus 14 ~~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~ 93 (386)
+++|||++.+++++ ..+.|++.+ ++.+. ..+..++.+++.+.+. ++|++++....++++++++++++| |+|++.
T Consensus 1 m~~kvlv~~~~~~~-~~~~l~~~~-~v~~~-~~~~~~~~~~~~~~~~-~~d~~i~~~~~~i~~~~l~~~~~L--k~I~~~ 74 (330)
T 4e5n_A 1 MLPKLVITHRVHEE-ILQLLAPHC-ELITN-QTDSTLTREEILRRCR-DAQAMMAFMPDRVDADFLQACPEL--RVIGCA 74 (330)
T ss_dssp CCCEEEECSCCCHH-HHHHHTTTC-EEECC-CSSSCCCHHHHHHHHT-TCSEEEECTTCCBCHHHHHHCTTC--CEEEES
T ss_pred CCCEEEEecCCCHH-HHHHHHhCC-eEEEe-cCCCCCCHHHHHHHhC-CCeEEEEeCCCCCCHHHHhhCCCC--cEEEEC
Confidence 46789999988875 468887765 55432 2334568899988887 599999977789999999999988 999999
Q ss_pred cccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016620 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (386)
Q Consensus 94 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~ 173 (386)
|+|+|+||+++|+++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..|.+ ...|++++|+||||||+
T Consensus 75 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~-~~~~~~l~g~tvGIIG~ 153 (330)
T 4e5n_A 75 LKGFDNFDVDACTARGVWLTFVPDLLTVPTAELAIGLAVGLGRHLRAADAFVRSGKFRGWQP-RFYGTGLDNATVGFLGM 153 (330)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCS-CCCCCCSTTCEEEEECC
T ss_pred CCcccccCHHHHHhcCcEEEeCCCCCchHHHHHHHHHHHHHHhChHHHHHHHHhCCccccCc-cccCCccCCCEEEEEee
Confidence 99999999999999999999999999999999999999999999999999999999988876 34678999999999999
Q ss_pred ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhc
Q 016620 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (386)
Q Consensus 174 G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~l 253 (386)
|.||+++|+++ ++|||+|++||++....... ...+ . ...++++++++||+|++|+|+|++|+++
T Consensus 154 G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~---------~~~g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~l 217 (330)
T 4e5n_A 154 GAIGLAMADRL-QGWGATLQYHEAKALDTQTE---------QRLG-----L-RQVACSELFASSDFILLALPLNADTLHL 217 (330)
T ss_dssp SHHHHHHHHHT-TTSCCEEEEECSSCCCHHHH---------HHHT-----E-EECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCCcHhHH---------HhcC-----c-eeCCHHHHHhhCCEEEEcCCCCHHHHHH
Confidence 99999999997 79999999999986321110 0011 1 2358999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCC-------CCC-CCCCCCCCCeEEcCCCCCCc
Q 016620 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE-------PYM-KPGLSEMKNAIVVPHIASAS 325 (386)
Q Consensus 254 i~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~E-------P~~-~~~L~~~~nvilTPHia~~t 325 (386)
|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++| |++ ++|||++|||++|||+||+|
T Consensus 218 i~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~E~~~~~~~Pl~~~~~L~~~~nvilTPHia~~t 297 (330)
T 4e5n_A 218 VNAELLALVRPGALLVNPCRGSVVDEAAVLAALERGQLGGYAADVFEMEDWARADRPQQIDPALLAHPNTLFTPHIGSAV 297 (330)
T ss_dssp BCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCGGGCTTCTTCCSSCCHHHHTCSSEEECSSCTTCC
T ss_pred hCHHHHhhCCCCcEEEECCCCchhCHHHHHHHHHhCCccEEEecccccccccccCCCCCCCchHHcCCCEEECCcCCCCh
Confidence 9999999999999999999999999999999999999999999999999 975 46999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 326 KWTREGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 326 ~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
.++++++.+.+++||.+|++|+++.|.||.
T Consensus 298 ~e~~~~~~~~~~~ni~~~~~g~~~~~~vn~ 327 (330)
T 4e5n_A 298 RAVRLEIERCAAQNILQALAGERPINAVNR 327 (330)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSCCTTBSSC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCccCC
Confidence 999999999999999999999999999986
No 4
>4dgs_A Dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.50A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.6e-67 Score=514.00 Aligned_cols=314 Identities=28% Similarity=0.402 Sum_probs=249.1
Q ss_pred CCCCcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEE
Q 016620 12 PNGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (386)
Q Consensus 12 ~~~~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~ 91 (386)
++++++||++.+++++ ..+.|++. +++..... ..+.+++.+.+. ++|+++++..+++++++++++|+| |+|+
T Consensus 27 ~~~~~~vl~~~~~~~~-~~~~L~~~-~~v~~~~~---~~~~~~~~~~~~-~~d~li~~~~~~i~~~~l~~~p~L--k~I~ 98 (340)
T 4dgs_A 27 RNVKPDLLLVEPMMPF-VMDELQRN-YSVHRLYQ---AADRPALEAALP-SIRAVATGGGAGLSNEWMEKLPSL--GIIA 98 (340)
T ss_dssp ------CEECSCCCHH-HHHTHHHH-SCCEETTC---GGGHHHHHHHGG-GCCEEEEETTTCBCHHHHHHCSSC--CEEE
T ss_pred CCCCCEEEEECCCCHH-HHHHHhcC-CcEEEeCC---CCCHHHHHHHhC-CcEEEEEcCCCCCCHHHHhhCCCC--EEEE
Confidence 3567889999999875 46777553 44443221 135777777774 699999987778999999999988 9999
Q ss_pred EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016620 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (386)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIv 171 (386)
+.|+|+|+||+++|+++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..+. ....|++++|+|||||
T Consensus 99 ~~g~G~d~id~~~a~~~gI~V~n~pg~~~~~vAE~a~~l~L~~~R~~~~~~~~~~~g~W~~~~-~~~~~~~l~gktiGII 177 (340)
T 4dgs_A 99 INGVGTDKVDLARARRRNIDVTTTPGVLADDVADLGIALMLAVLRRVGDGDRLVREGRWAAGE-QLPLGHSPKGKRIGVL 177 (340)
T ss_dssp EESSCCTTBCHHHHHHTTCEEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCC-------CCCCCCTTCEEEEE
T ss_pred ECCCCccccCHHHHHhCCEEEEECCCCCcchHHHHHHHHHHHHHhChHHHHHHHhcCCccccc-CcCccccccCCEEEEE
Confidence 999999999999999999999999999999999999999999999999999999999986431 1235789999999999
Q ss_pred ecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhh
Q 016620 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (386)
Q Consensus 172 G~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~ 251 (386)
|+|.||+++|+++ ++|||+|++|||+.... .......+++|++++||+|++|+|++++|+
T Consensus 178 GlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~-------------------~~~~~~~sl~ell~~aDvVil~vP~t~~t~ 237 (340)
T 4dgs_A 178 GLGQIGRALASRA-EAFGMSVRYWNRSTLSG-------------------VDWIAHQSPVDLARDSDVLAVCVAASAATQ 237 (340)
T ss_dssp CCSHHHHHHHHHH-HTTTCEEEEECSSCCTT-------------------SCCEECSSHHHHHHTCSEEEECC-------
T ss_pred CCCHHHHHHHHHH-HHCCCEEEEEcCCcccc-------------------cCceecCCHHHHHhcCCEEEEeCCCCHHHH
Confidence 9999999999997 79999999999976431 112235689999999999999999999999
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHHH
Q 016620 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (386)
Q Consensus 252 ~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~ 331 (386)
++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++.+|||++|||++|||+||+|.+++++
T Consensus 238 ~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDVf~~EP~~~~~L~~~~nvilTPHia~~t~e~~~~ 317 (340)
T 4dgs_A 238 NIVDASLLQALGPEGIVVNVARGNVVDEDALIEALKSGTIAGAGLDVFVNEPAIRSEFHTTPNTVLMPHQGSATVETRMA 317 (340)
T ss_dssp ---CHHHHHHTTTTCEEEECSCC--------------CCSSEEEESCCSSSSSCCSHHHHSSSEEECSSCSSCCHHHHHH
T ss_pred HHhhHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCceEEEeCCcCCCCCCccchhhCCCEEEcCcCCcCCHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999888999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCC
Q 016620 332 MATLAALNVLGKIKGYPIWGNPN 354 (386)
Q Consensus 332 ~~~~~~~ni~~~~~g~~~~~~v~ 354 (386)
+...+++||.+|++|+++.|.||
T Consensus 318 ~~~~~~~nl~~~~~g~~~~~~Vn 340 (340)
T 4dgs_A 318 MGKLVLANLAAHFAGEKAPNTVN 340 (340)
T ss_dssp HHHHHHHHHHHHHTTSCCTTBC-
T ss_pred HHHHHHHHHHHHHcCCCCCCCcC
Confidence 99999999999999999999997
No 5
>3k5p_A D-3-phosphoglycerate dehydrogenase; niaid, ssgcid, seattle structural genomics center for infect disease, brucellosis; 2.15A {Brucella melitensis biovar abortus}
Probab=100.00 E-value=5e-66 Score=516.05 Aligned_cols=316 Identities=28% Similarity=0.365 Sum_probs=279.5
Q ss_pred CCCCCcEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcE
Q 016620 11 NPNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKA 89 (386)
Q Consensus 11 ~~~~~~~vlvt~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~ 89 (386)
.|+++|||+++.++.+.. .+.|++.++ ++++.. ..++.+++.+.+. ++|++++...+++++++++++|+| |+
T Consensus 11 ~~~~~~kIl~~~~i~~~~-~~~l~~~g~~~v~~~~---~~~~~~~l~~~~~-~~d~l~v~~~~~i~~~~l~~~p~L--k~ 83 (416)
T 3k5p_A 11 LSRDRINVLLLEGISQTA-VEYFKSSGYTNVTHLP---KALDKADLIKAIS-SAHIIGIRSRTQLTEEIFAAANRL--IA 83 (416)
T ss_dssp -CGGGSCEEECSCCCHHH-HHHHHHTTCCCEEECS---SCCCHHHHHHHHT-TCSEEEECSSCCBCHHHHHHCTTC--CE
T ss_pred CCCCCcEEEEECCCCHHH-HHHHHHCCCcEEEECC---CCCCHHHHHHHcc-CCEEEEEcCCCCCCHHHHHhCCCc--EE
Confidence 467789999999888754 688888877 776532 2468899988887 599998888889999999999988 99
Q ss_pred EEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEE
Q 016620 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (386)
Q Consensus 90 i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vg 169 (386)
|++.|+|+|+||+++|+++||.|+|+|++++++|||++++++|++.|++..+++.+++|.|..+ .+.+.+++|+|||
T Consensus 84 I~~~~~G~d~IDl~~a~~~GI~V~n~p~~n~~aVAE~~l~l~L~l~R~i~~~~~~~~~g~W~~~---~~~~~el~gktvG 160 (416)
T 3k5p_A 84 VGCFSVGTNQVELKAARKRGIPVFNAPFSNTRSVAELVIGEIIMLMRRIFPRSVSAHAGGWEKT---AIGSREVRGKTLG 160 (416)
T ss_dssp EEECSSCCTTBCHHHHHHTTCCEECCSSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC---CTTCCCSTTCEEE
T ss_pred EEECccccCccCHHHHHhcCcEEEeCCCcccHHHHHHHHHHHHHHhcccHHHHHhhhccccccc---CCCCccCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999999999999987543 2356899999999
Q ss_pred EEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChh
Q 016620 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (386)
Q Consensus 170 IvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~ 249 (386)
|||+|.||+++|+++ ++|||+|++||++.... ........+++|++++||+|++|+|++++
T Consensus 161 IIGlG~IG~~vA~~l-~~~G~~V~~yd~~~~~~------------------~~~~~~~~sl~ell~~aDvV~lhvPlt~~ 221 (416)
T 3k5p_A 161 IVGYGNIGSQVGNLA-ESLGMTVRYYDTSDKLQ------------------YGNVKPAASLDELLKTSDVVSLHVPSSKS 221 (416)
T ss_dssp EECCSHHHHHHHHHH-HHTTCEEEEECTTCCCC------------------BTTBEECSSHHHHHHHCSEEEECCCC---
T ss_pred EEeeCHHHHHHHHHH-HHCCCEEEEECCcchhc------------------ccCcEecCCHHHHHhhCCEEEEeCCCCHH
Confidence 999999999999997 79999999999864321 00122457999999999999999999999
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-----CCCCCCCCeEEcCCCCCC
Q 016620 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-----PGLSEMKNAIVVPHIASA 324 (386)
Q Consensus 250 t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-----~~L~~~~nvilTPHia~~ 324 (386)
|+++|+++.|++||+|++|||+|||+++|++||+++|++|++.||++|||++||++. +|||++|||++|||+||+
T Consensus 222 T~~li~~~~l~~mk~gailIN~aRG~vvd~~aL~~aL~~g~i~gAalDVf~~EP~~~~~~~~~pL~~~~nvilTPHig~~ 301 (416)
T 3k5p_A 222 TSKLITEAKLRKMKKGAFLINNARGSDVDLEALAKVLQEGHLAGAAIDVFPVEPASNGERFSTPLQGLENVILTPHIGGS 301 (416)
T ss_dssp --CCBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEECCCSSCCSSTTSCCCCTTTTCTTEEECCSCTTC
T ss_pred HhhhcCHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCccEEEeCCCCCCCCCcccccchhHhcCCCEEECCCCCCC
Confidence 999999999999999999999999999999999999999999999999999999864 589999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 325 SKWTREGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 325 t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
|.++++++...+++|+.+|++|++..+.||.
T Consensus 302 T~ea~~~~~~~~~~nl~~~l~~g~~~~~Vn~ 332 (416)
T 3k5p_A 302 TEEAQERIGTEVTRKLVEYSDVGSTVGAVNF 332 (416)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHCCCTTBSSS
T ss_pred CHHHHHHHHHHHHHHHHHHHhhCCCCceeeC
Confidence 9999999999999999999999999999986
No 6
>2yq5_A D-isomer specific 2-hydroxyacid dehydrogenase; oxidoreductase; HET: NAD; 2.75A {Lactobacillus delbrueckii subsp} PDB: 2yq4_A*
Probab=100.00 E-value=6e-66 Score=505.89 Aligned_cols=316 Identities=27% Similarity=0.399 Sum_probs=269.4
Q ss_pred CcEEEEeCCCCc-hHHHHH-HHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHH-HHHHhhccCCcEEE
Q 016620 15 KYRVVSTKPMPG-TRWINL-LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGET-LFAALSRAGGKAFS 91 (386)
Q Consensus 15 ~~~vlvt~~~~~-~~~~~~-l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~-~l~~l~~l~~k~i~ 91 (386)
+|||++....+. ..+++. +++.++++..... .++ +++.+.+. ++|++++...++++++ +++++++.++|+|+
T Consensus 1 Mmki~~~~~~~~~~~~~~~~~~~~~~~v~~~~~---~~~-~~~~~~~~-~~d~li~~~~~~~~~~~~l~~~~~~~Lk~I~ 75 (343)
T 2yq5_A 1 MTKIAMYNVSPIEVPYIEDWAKKNDVEIKTTDQ---ALT-SATVDLAE-GCSSVSLKPLGPVDEEVVYQKLSEYGVKCIG 75 (343)
T ss_dssp -CEEEEESCCGGGHHHHHHHHHHHTCEEEEESS---CCS-TTGGGGGT-TCSEEEECCSSCBCCHHHHHHHHHTTCCEEE
T ss_pred CceEEEEecCcccHHHHHHHHHhCCeEEEECCC---CCC-HHHHHHhc-CCcEEEEcCCCCcCHHHHHHhccccCceEEE
Confidence 478888653332 233433 4556777765433 223 45555565 5999999877899999 99999875669999
Q ss_pred EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHH-cCccCCCCCCcccccccCCCeEEE
Q 016620 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMR-AGLYDGWLPNLFVGNLLKGQTVGV 170 (386)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~-~~~~~~w~~~~~~g~~l~g~~vgI 170 (386)
+.|+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.++ +|.|. |.. ...+++++|+||||
T Consensus 76 ~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~~g~~~-w~~-~~~~~~l~gktvgI 153 (343)
T 2yq5_A 76 LRIVGFNTINFDWTKKYNLLVTNVPVYSPRAIAEMTVTQAMYLLRKIGEFRYRMDHDHDFT-WPS-NLISNEIYNLTVGL 153 (343)
T ss_dssp ESSSCCTTBCSSTTCC--CEEECCSCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHHHCCCC-CCG-GGCBCCGGGSEEEE
T ss_pred ECceeecccchhHHHhCCEEEEECCCCCcHHHHHHHHHHHHHHHhchHHHHHHHHHcCCcc-ccc-CCCccccCCCeEEE
Confidence 9999999999999999999999999999999999999999999999999999999 99885 743 25678999999999
Q ss_pred EecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhh
Q 016620 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (386)
Q Consensus 171 vG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t 250 (386)
||+|.||+++|+++ ++|||+|++||++.....+ . .....++++++++||+|++|+|+|++|
T Consensus 154 iGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~------------~------~~~~~~l~ell~~aDvV~l~~Plt~~t 214 (343)
T 2yq5_A 154 IGVGHIGSAVAEIF-SAMGAKVIAYDVAYNPEFE------------P------FLTYTDFDTVLKEADIVSLHTPLFPST 214 (343)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCGGGT------------T------TCEECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EecCHHHHHHHHHH-hhCCCEEEEECCChhhhhh------------c------cccccCHHHHHhcCCEEEEcCCCCHHH
Confidence 99999999999997 7999999999998754110 0 112359999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCC--CCCC------------CCCCCCCeE
Q 016620 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP--YMKP------------GLSEMKNAI 316 (386)
Q Consensus 251 ~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP--~~~~------------~L~~~~nvi 316 (386)
+++|+++.|++||+|++|||+|||+++|++||+++|++|++.||+||||++|| ++.+ |||++|||+
T Consensus 215 ~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~l~~~~~pL~~~~nvi 294 (343)
T 2yq5_A 215 ENMIGEKQLKEMKKSAYLINCARGELVDTGALIKALQDGEIAGAGLDTLAGESSYFGHTGLTDSEIPEDYKTLAKMPNVV 294 (343)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSCEEESCCTTGGGTTTCCSCCTTTSCHHHHHHTTCTTEE
T ss_pred HHHhhHHHHhhCCCCcEEEECCCChhhhHHHHHHHHHcCCCcEEEecccccCCCccccccccccccccchhHHhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999 4433 799999999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC
Q 016620 317 VVPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQV 356 (386)
Q Consensus 317 lTPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~ 356 (386)
+|||+|++|.++++++.+.+++||.+|++|+++.|.||..
T Consensus 295 lTPHia~~t~ea~~~~~~~~~~ni~~~l~g~~~~~~v~~~ 334 (343)
T 2yq5_A 295 ITPHSAFYTETSIRNMVQICLTDQLTIAKGGRPRSIVNLT 334 (343)
T ss_dssp ECSSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCTTBC---
T ss_pred ECCccccchHHHHHHHHHHHHHHHHHHHcCCCCCceECCc
Confidence 9999999999999999999999999999999999999875
No 7
>1sc6_A PGDH, D-3-phosphoglycerate dehydrogenase; allosteric regulation phosphoglycerate dehydrogenase PGDH, oxidoreductase; HET: NAD; 2.09A {Escherichia coli} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 PDB: 1psd_A* 1yba_A* 2p9c_A* 2p9e_A* 2pa3_A* 2p9g_A*
Probab=100.00 E-value=3.3e-65 Score=511.28 Aligned_cols=319 Identities=24% Similarity=0.328 Sum_probs=275.2
Q ss_pred CCCCcEEEEeCCCCchHHHHHHHhCCC-eEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEE
Q 016620 12 PNGKYRVVSTKPMPGTRWINLLIEQDC-RVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAF 90 (386)
Q Consensus 12 ~~~~~~vlvt~~~~~~~~~~~l~~~~~-~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i 90 (386)
|.++|||+++.++.+. ..+.|++.++ ++++.. ..++.+++.+.+. ++|++++...+++++++++++++| |+|
T Consensus 1 ~~~~~kil~~~~~~~~-~~~~l~~~~~~~v~~~~---~~~~~~~l~~~~~-~~d~l~~~~~~~~~~~~l~~~~~L--k~I 73 (404)
T 1sc6_A 1 EKDKIKFLLVEGVHQK-ALESLRAAGYTNIEFHK---GALDDEQLKESIR-DAHFIGLRSRTHLTEDVINAAEKL--VAI 73 (404)
T ss_dssp CCSSCCEEECSCCCHH-HHHHHHHTTCCCEEECS---SCCCHHHHHHHTT-SCSEEEECSSCCBCHHHHHHCSSC--CEE
T ss_pred CCCceEEEEeCCCCHH-HHHHHHhCCCcEEEEcC---CCCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--cEE
Confidence 3567899998888764 4678877776 676532 2458899988887 599998887788999999999988 999
Q ss_pred EEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEE
Q 016620 91 SNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV 170 (386)
Q Consensus 91 ~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgI 170 (386)
++.|+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|..+ .+.|.+++|+|+||
T Consensus 74 ~~~~~G~d~iD~~~a~~~GI~V~n~p~~n~~~vAE~~~~~~L~~~R~i~~~~~~~~~g~W~~~---~~~~~el~gktlGi 150 (404)
T 1sc6_A 74 GAFAIGTNQVDLDAAAKRGIPVFNAPFSNTRSVAELVIGELLLLLRGVPEANAKAHRGVGNKL---AAGSFEARGKKLGI 150 (404)
T ss_dssp EECSSCCTTBCHHHHHHTTCCEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHHTCCC--------CCCSTTCEEEE
T ss_pred EECCcccCccCHHHHHhCCCEEEecCcccHHHHHHHHHHHHHHHHhChHHHHHHHHcCCcccc---CCCccccCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999999987532 24568999999999
Q ss_pred EecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhh
Q 016620 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (386)
Q Consensus 171 vG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t 250 (386)
||+|.||+.+|+++ ++|||+|++|||+.... .+ ......+++|++++||+|++|+|++++|
T Consensus 151 IGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~--------------~~----~~~~~~~l~ell~~aDvV~l~~P~t~~t 211 (404)
T 1sc6_A 151 IGYGHIGTQLGILA-ESLGMYVYFYDIENKLP--------------LG----NATQVQHLSDLLNMSDVVSLHVPENPST 211 (404)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCCC--------------CT----TCEECSCHHHHHHHCSEEEECCCSSTTT
T ss_pred EeECHHHHHHHHHH-HHCCCEEEEEcCCchhc--------------cC----CceecCCHHHHHhcCCEEEEccCCChHH
Confidence 99999999999997 79999999999865320 00 1223468999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-----CCCCCCCCCeEEcCCCCCCc
Q 016620 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-----KPGLSEMKNAIVVPHIASAS 325 (386)
Q Consensus 251 ~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-----~~~L~~~~nvilTPHia~~t 325 (386)
+++|+++.|++||+|++|||+|||+++|+++|+++|++|++.||+||||++||++ .+|||++|||++|||+|++|
T Consensus 212 ~~li~~~~l~~mk~ga~lIN~aRg~~vd~~aL~~aL~~g~i~gA~lDVf~~EP~~~~~~~~~pL~~~~nvilTPHi~~~T 291 (404)
T 1sc6_A 212 KNMMGAKEISLMKPGSLLINASRGTVVDIPALADALASKHLAGAAIDVFPTEPATNSDPFTSPLAEFDNVLLTPHIGGST 291 (404)
T ss_dssp TTCBCHHHHHHSCTTEEEEECSCSSSBCHHHHHHHHHTTSEEEEEEEC---------CTTTGGGTTCTTEEEECCCSCCS
T ss_pred HHHhhHHHHhhcCCCeEEEECCCChHHhHHHHHHHHHcCCccEEEEeecCCCCCCccccccchhhcCCCEEECCCCCCCc
Confidence 9999999999999999999999999999999999999999999999999999986 35899999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcCCC
Q 016620 326 KWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLN 361 (386)
Q Consensus 326 ~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~~~~~~ 361 (386)
.++++++...+++|+.+|++|+++.|.||. |.+.
T Consensus 292 ~ea~~~~~~~~~~nl~~~l~g~~~~~~vn~--p~~~ 325 (404)
T 1sc6_A 292 QEAQENIGLEVAGKLIKYSDNGSTLSAVNF--PEVS 325 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCCCTTBSSS--CCCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCCcceecc--cccc
Confidence 999999999999999999999999999985 5443
No 8
>3hg7_A D-isomer specific 2-hydroxyacid dehydrogenase FAM protein; structural genomics; 1.80A {Aeromonas salmonicida subsp}
Probab=100.00 E-value=1.5e-65 Score=499.47 Aligned_cols=309 Identities=23% Similarity=0.258 Sum_probs=270.8
Q ss_pred CCCcEEEEeCCCCchHHHHHH-HhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEE
Q 016620 13 NGKYRVVSTKPMPGTRWINLL-IEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (386)
Q Consensus 13 ~~~~~vlvt~~~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~ 91 (386)
.+||||+++.+..+ .|.+.| ++..+++++.... +.+++.+.+. ++|+++++. .+++++++++|+| |+|+
T Consensus 3 ~~~mkili~~~~~~-~~~~~L~~~~~p~~~~~~~~----~~~~~~~~~~-~ad~li~~~--~~~~~~l~~~~~L--k~I~ 72 (324)
T 3hg7_A 3 LSQRTLLLLSQDNA-HYERLLKAAHLPHLRILRAD----NQSDAEKLIG-EAHILMAEP--ARAKPLLAKANKL--SWFQ 72 (324)
T ss_dssp -CCEEEEEESTTHH-HHHHHHHHSCCTTEEEEECS----SHHHHHHHGG-GCSEEEECH--HHHGGGGGGCTTC--CEEE
T ss_pred ccccEEEEecCCCH-HHHHHHhhccCCCeEEEeCC----ChhHHHHHhC-CCEEEEECC--CCCHHHHhhCCCc--eEEE
Confidence 45699999988875 588989 7777788775442 4677777776 599998853 4556788889988 9999
Q ss_pred EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016620 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (386)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIv 171 (386)
+.|+|+|+||++++++ ||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..+ .+.+++|+|||||
T Consensus 73 ~~~~G~d~id~~~~~~-gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g~tvGII 146 (324)
T 3hg7_A 73 STYAGVDVLLDARCRR-DYQLTNVRGIFGPLMSEYVFGHLLSLMRQLPLYREQQKQRLWQSH-----PYQGLKGRTLLIL 146 (324)
T ss_dssp ESSSCCGGGSCTTSCC-SSEEECCCSCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTTCEEEEE
T ss_pred ECCCCCCccChHHHhC-CEEEEECCCcChHHHHHHHHHHHHHHHhChHHHHHHHhhCCCcCC-----CCcccccceEEEE
Confidence 9999999999988765 999999999999999999999999999999999999999987542 3579999999999
Q ss_pred ecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhh
Q 016620 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (386)
Q Consensus 172 G~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~ 251 (386)
|+|.||+++|+++ ++|||+|++||++..... .. .......+++|++++||+|++|+|+|++|+
T Consensus 147 GlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~~--~~~~~~~~l~ell~~aDvV~l~lPlt~~T~ 209 (324)
T 3hg7_A 147 GTGSIGQHIAHTG-KHFGMKVLGVSRSGRERA--------------GF--DQVYQLPALNKMLAQADVIVSVLPATRETH 209 (324)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSSCCCCT--------------TC--SEEECGGGHHHHHHTCSEEEECCCCCSSST
T ss_pred EECHHHHHHHHHH-HhCCCEEEEEcCChHHhh--------------hh--hcccccCCHHHHHhhCCEEEEeCCCCHHHH
Confidence 9999999999997 799999999999764310 00 111234689999999999999999999999
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCCCCeEEcCCCCCCcHHHHH
Q 016620 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWTRE 330 (386)
Q Consensus 252 ~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t~~~~~ 330 (386)
++|+++.|+.||+|++|||+|||+++|++||+++|++|++.||+||||++||++. +|||++|||++|||+||+|.+ +
T Consensus 210 ~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~--~ 287 (324)
T 3hg7_A 210 HLFTASRFEHCKPGAILFNVGRGNAINEGDLLTALRTGKLGMAVLDVFEQEPLPADSPLWGQPNLIITPHNSAYSFP--D 287 (324)
T ss_dssp TSBCTTTTTCSCTTCEEEECSCGGGBCHHHHHHHHHTTSSSEEEESCCSSSSCCTTCTTTTCTTEEECCSCSSCCCH--H
T ss_pred HHhHHHHHhcCCCCcEEEECCCchhhCHHHHHHHHHcCCceEEEeccCCCCCCCCCChhhcCCCEEEeCCCccccHH--H
Confidence 9999999999999999999999999999999999999999999999999999875 699999999999999999975 5
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCCCC
Q 016620 331 GMATLAALNVLGKIKGYPIWGNPNQV 356 (386)
Q Consensus 331 ~~~~~~~~ni~~~~~g~~~~~~v~~~ 356 (386)
++.+.+++||.+|++|+++.|.||.-
T Consensus 288 ~~~~~~~~nl~~~~~G~~~~~~V~~~ 313 (324)
T 3hg7_A 288 DVAQIFVRNYIRFIDGQPLDGKIDFD 313 (324)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTBCCCC
T ss_pred HHHHHHHHHHHHHHcCCCCcceEChh
Confidence 79999999999999999999999863
No 9
>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum}
Probab=100.00 E-value=1.4e-65 Score=500.10 Aligned_cols=315 Identities=19% Similarity=0.221 Sum_probs=267.5
Q ss_pred CcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHH-HHhhccCCcEEEEc
Q 016620 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLF-AALSRAGGKAFSNM 93 (386)
Q Consensus 15 ~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l-~~l~~l~~k~i~~~ 93 (386)
|||||++.++++ ++.+.|++.++++++....+ .+.+++ . ++|+++++.. ++ ++++ +++|+| |+|++.
T Consensus 1 m~kil~~~~~~~-~~~~~L~~~~~~~~~~~~~~--~~~~~~----~-~ad~l~~~~~-~~-~~~l~~~~~~L--k~I~~~ 68 (324)
T 3evt_A 1 MSLVLMAQATKP-EQLQQLQTTYPDWTFKDAAA--VTAADY----D-QIEVMYGNHP-LL-KTILARPTNQL--KFVQVI 68 (324)
T ss_dssp -CEEEECSCCCH-HHHHHHHHHCTTCEEEETTS--CCTTTG----G-GEEEEESCCT-HH-HHHHHSTTCCC--CEEECS
T ss_pred CcEEEEecCCCH-HHHHHHHhhCCCeEEecCCc--cChHHh----C-CcEEEEECCc-Ch-HHHHHhhCCCc--eEEEEC
Confidence 478999999887 46888988877666543322 233443 2 5898887754 46 7888 678988 999999
Q ss_pred cccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHH-HHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016620 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA-DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (386)
Q Consensus 94 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~-~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG 172 (386)
|+|+|+||+++++++||.|+|+||+++.+||||+++++|++.|++..+ .+.+++|.|.... .+++++|+||||||
T Consensus 69 ~~G~d~id~~~~~~~gI~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~~W~~~~----~~~~l~gktvGIiG 144 (324)
T 3evt_A 69 SAGVDYLPLKALQAAGVVVANTSGIHADAISESVLAAMLSVVRGYHAAWLNQRGARQWALPM----TTSTLTGQQLLIYG 144 (324)
T ss_dssp SSCCTTSCHHHHHHTTCEEECCTTHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCSSCSS----CCCCSTTCEEEEEC
T ss_pred CccccccCHHHHHHCCcEEEECCCcCchHHHHHHHHHHHHHHhChhHHHHHHHhcCCcccCC----CCccccCCeEEEEC
Confidence 999999999999999999999999999999999999999999999999 8889999875421 46899999999999
Q ss_pred cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhh
Q 016620 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (386)
Q Consensus 173 ~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~ 252 (386)
+|.||+++|+++ ++|||+|++||++..... . .. ......++++++++||+|++|+|+|++|++
T Consensus 145 lG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~-~~-~~~~~~~l~ell~~aDvV~l~lPlt~~t~~ 207 (324)
T 3evt_A 145 TGQIGQSLAAKA-SALGMHVIGVNTTGHPAD--------------H-FH-ETVAFTATADALATANFIVNALPLTPTTHH 207 (324)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEEESSCCCCT--------------T-CS-EEEEGGGCHHHHHHCSEEEECCCCCGGGTT
T ss_pred cCHHHHHHHHHH-HhCCCEEEEECCCcchhH--------------h-Hh-hccccCCHHHHHhhCCEEEEcCCCchHHHH
Confidence 999999999997 799999999998764310 0 00 112346899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCCCCeEEcCCCCCCcHHHHHH
Q 016620 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWTREG 331 (386)
Q Consensus 253 li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t~~~~~~ 331 (386)
+|+++.|+.||+|++|||+|||+++|++||+++|++|++.||+||||++||++. +|||++|||++|||+||+|.+++++
T Consensus 208 li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~t~~~~~~ 287 (324)
T 3evt_A 208 LFSTELFQQTKQQPMLINIGRGPAVDTTALMTALDHHQLSMAALDVTEPEPLPTDHPLWQRDDVLITPHISGQIAHFRAT 287 (324)
T ss_dssp CBSHHHHHTCCSCCEEEECSCGGGBCHHHHHHHHHTTSCSEEEESSCSSSSCCTTCGGGGCSSEEECCSCTTCCCCHHHH
T ss_pred hcCHHHHhcCCCCCEEEEcCCChhhhHHHHHHHHHhCCceEEEeCCCCCCCCCCCChhhcCCCEEEcCccccChHHHHHH
Confidence 999999999999999999999999999999999999999999999999999875 7999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcC-CCCCCCCCCCCcCCCC
Q 016620 332 MATLAALNVLGKIKG-YPIWGNPNQVEPFLNE 362 (386)
Q Consensus 332 ~~~~~~~ni~~~~~g-~~~~~~v~~~~~~~~~ 362 (386)
+.+.+++||.+|++| +++.|.||.-..+.++
T Consensus 288 ~~~~~~~nl~~~l~~~~~~~n~V~~~~~~~~~ 319 (324)
T 3evt_A 288 VFPIFAANFAQFVKDGTLVRNQVDLNRGYEGH 319 (324)
T ss_dssp HHHHHHHHHHHHHHHSCCCSCBCC--------
T ss_pred HHHHHHHHHHHHHhCCCCCCceECcccccCCC
Confidence 999999999999965 5789999976555554
No 10
>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}
Probab=100.00 E-value=4.6e-64 Score=494.65 Aligned_cols=315 Identities=27% Similarity=0.402 Sum_probs=273.3
Q ss_pred CcEEEEeCCCCch-----HHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEe-cCCccccHHHHHHhhccCCc
Q 016620 15 KYRVVSTKPMPGT-----RWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIG-QLTEDWGETLFAALSRAGGK 88 (386)
Q Consensus 15 ~~~vlvt~~~~~~-----~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~-~~~~~~~~~~l~~l~~l~~k 88 (386)
+|||++...+... .| +.+ .+++++++.. ...+.+++.+.+. ++|++++ +...++++++++++|+| |
T Consensus 2 smki~~~d~~~~~~~~~~~~-~~l--~~~~v~~~~~--~~~~~~~l~~~~~-~ad~li~~~~~~~~~~~~l~~~~~L--k 73 (352)
T 3gg9_A 2 SLKIAVLDDYQDAVRKLDCF-SLL--QDHEVKVFNN--TVKGVGQLAARVA-DVEALVLIRERTRVTRQLLDRLPKL--K 73 (352)
T ss_dssp CCEEEECCCTTCCGGGSGGG-GGG--TTSEEEECCS--CCCSHHHHHHHTT-TCSEEEECTTSSCBCHHHHTTCTTC--C
T ss_pred ceEEEEEcCccccchhhhhh-hhh--cCceEEEecC--CCCCHHHHHHHhc-CCeEEEEeCCCCCCCHHHHhhCCCC--e
Confidence 4889887665432 22 334 2467766433 2247788888887 5999998 56678999999999988 9
Q ss_pred EEEEccccc----cccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCC-------CCCCc
Q 016620 89 AFSNMAVGY----NNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDG-------WLPNL 157 (386)
Q Consensus 89 ~i~~~~~G~----d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~-------w~~~~ 157 (386)
+|++.|+|+ |+||+++|+++||.|+|+||+ +.+||||+++++|++.|++..+++.+++|.|.. |.+..
T Consensus 74 ~I~~~g~G~~~~~d~id~~~a~~~gI~V~n~pg~-~~~vAE~al~l~L~~~R~~~~~~~~~~~g~W~~~~~~~~~~~~~~ 152 (352)
T 3gg9_A 74 IISQTGRVSRDAGGHIDLEACTDKGVVVLEGKGS-PVAPAELTWALVMAAQRRIPQYVASLKHGAWQQSGLKSTTMPPNF 152 (352)
T ss_dssp EEEESSCCCCSSSCSBCHHHHHHHTCEEECCCCC-SHHHHHHHHHHHHHHHTTHHHHHHHHHTTCTTCCCCCCTTSCTTT
T ss_pred EEEEeCcccCCccCcccHHHHHhCCeEEEECCCC-cHHHHHHHHHHHHHHHhhHHHHHHHHHcCCCCccccccccccccc
Confidence 999999999 999999999999999999999 999999999999999999999999999999863 33333
Q ss_pred ccccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 158 FVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 158 ~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
..|++++|+||||||+|.||+++|+++ ++|||+|++||++...... ...+ .....+++|++++|
T Consensus 153 ~~~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~----------~~~g-----~~~~~~l~ell~~a 216 (352)
T 3gg9_A 153 GIGRVLKGQTLGIFGYGKIGQLVAGYG-RAFGMNVLVWGRENSKERA----------RADG-----FAVAESKDALFEQS 216 (352)
T ss_dssp TSBCCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSHHHHHHH----------HHTT-----CEECSSHHHHHHHC
T ss_pred ccCccCCCCEEEEEeECHHHHHHHHHH-HhCCCEEEEECCCCCHHHH----------HhcC-----ceEeCCHHHHHhhC
Confidence 467899999999999999999999997 7999999999998643211 1111 22345999999999
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCCCCCCCCeE
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAI 316 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi 316 (386)
|+|++|+|++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++ ++|||++|||+
T Consensus 217 DiV~l~~Plt~~t~~li~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvi 296 (352)
T 3gg9_A 217 DVLSVHLRLNDETRSIITVADLTRMKPTALFVNTSRAELVEENGMVTALNRGRPGMAAIDVFETEPILQGHTLLRMENCI 296 (352)
T ss_dssp SEEEECCCCSTTTTTCBCHHHHTTSCTTCEEEECSCGGGBCTTHHHHHHHHTSSSEEEECCCSSSCCCSCCGGGGCTTEE
T ss_pred CEEEEeccCcHHHHHhhCHHHHhhCCCCcEEEECCCchhhcHHHHHHHHHhCCccEEEecccCCCCCCCCChhhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999986 47999999999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 317 VVPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 317 lTPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
+|||+||+|.++++++...+++||.+|++|+|+ |.||.
T Consensus 297 lTPHia~~t~e~~~~~~~~~~~ni~~~~~G~p~-~~Vn~ 334 (352)
T 3gg9_A 297 CTPHIGYVERESYEMYFGIAFQNILDILQGNVD-SVANP 334 (352)
T ss_dssp ECCSCTTCBHHHHHHHHHHHHHHHHHHHTTCCT-TBSCG
T ss_pred ECCCCCCCCHHHHHHHHHHHHHHHHHHHcCCCC-cccCH
Confidence 999999999999999999999999999999885 77874
No 11
>2pi1_A D-lactate dehydrogenase; oxidoreductase, D-LDH, NAD, 3D-structure, structural genomics, NPPSFA; HET: MSE NAD; 2.12A {Aquifex aeolicus VF5} PDB: 3kb6_A*
Probab=100.00 E-value=6.2e-65 Score=498.01 Aligned_cols=313 Identities=29% Similarity=0.373 Sum_probs=270.7
Q ss_pred cEEEEeCCCCc-hHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEcc
Q 016620 16 YRVVSTKPMPG-TRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (386)
Q Consensus 16 ~~vlvt~~~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~ 94 (386)
|||++...-+. ..+++.+.+ .+++++... . ..+|+.+.+. ++|+++++...++++++++++++| |+|++.|
T Consensus 1 Mki~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~-~~~e~~~~~~-~~d~li~~~~~~i~~~~l~~~~~L--k~I~~~~ 72 (334)
T 2pi1_A 1 MNVLFTSVPQEDVPFYQEALK-DLSLKIYTT---D-VSKVPENELK-KAELISVFVYDKLTEELLSKMPRL--KLIHTRS 72 (334)
T ss_dssp CEEEECSCCTTHHHHHHHHTT-TSEEEECSS---C-GGGSCHHHHH-HCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CEEEEEccChhhHHHHHHHhh-cCCEEEECC---C-CcHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECC
Confidence 57777443332 234554433 346666322 1 2356666665 599999987789999999999997 9999999
Q ss_pred ccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC
Q 016620 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (386)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G 174 (386)
+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|. |.. ...|++|+|+||||||+|
T Consensus 73 ~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~tvgIiG~G 150 (334)
T 2pi1_A 73 VGFDHIDLDYCKKKGILVTHIPAYSPESVAEHTFAMILTLVKRLKRIEDRVKKLNFS-QDS-EILARELNRLTLGVIGTG 150 (334)
T ss_dssp SCCTTBCHHHHHHHTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCG-GGCBCCGGGSEEEEECCS
T ss_pred ccccccCHHHHHHCCeEEEECCCcCcHHHHHHHHHHHHHHHHhHHHHHHHHHcCCCc-ccc-CccceeccCceEEEECcC
Confidence 999999999999999999999999999999999999999999999999999999985 431 235789999999999999
Q ss_pred hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcc
Q 016620 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (386)
Q Consensus 175 ~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li 254 (386)
.||+++|+++ ++|||+|++||++....... .+ . ...+++|++++||+|++|+|+|++|+++|
T Consensus 151 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~-----------~g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~li 212 (334)
T 2pi1_A 151 RIGSRVAMYG-LAFGMKVLCYDVVKREDLKE-----------KG-----C-VYTSLDELLKESDVISLHVPYTKETHHMI 212 (334)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHHH-----------TT-----C-EECCHHHHHHHCSEEEECCCCCTTTTTCB
T ss_pred HHHHHHHHHH-HHCcCEEEEECCCcchhhHh-----------cC-----c-eecCHHHHHhhCCEEEEeCCCChHHHHhh
Confidence 9999999997 79999999999987653211 11 1 23579999999999999999999999999
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC---------------C-CCCCCCCCCeEEc
Q 016620 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY---------------M-KPGLSEMKNAIVV 318 (386)
Q Consensus 255 ~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~---------------~-~~~L~~~~nvilT 318 (386)
+++.|++||+|++|||+|||+++|+++|+++|++|++.||+||||++||+ + ++|||++|||++|
T Consensus 213 ~~~~l~~mk~gailIN~aRg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~~~~~~~~~~~~~~pL~~~~nvilT 292 (334)
T 2pi1_A 213 NEERISLMKDGVYLINTARGKVVDTDALYRAYQRGKFSGLGLDVFEDEEILILKKYTEGKATDKNLKILELACKDNVIIT 292 (334)
T ss_dssp CHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCEEEEEESCCTTHHHHHTTGGGGTCCCHHHHHHHHHHTSTTEEEC
T ss_pred CHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEeecCCCCCCccccccccccccccCccCChhhcCCCEEEC
Confidence 99999999999999999999999999999999999999999999999997 2 3589999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC
Q 016620 319 PHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQV 356 (386)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~ 356 (386)
||+|++|.++++++.+.+++||.+|++|+++.|.||..
T Consensus 293 PHia~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~Vn~~ 330 (334)
T 2pi1_A 293 PHIAYYTDKSLERIREETVKVVKAFVKGDLEQIKGNFV 330 (334)
T ss_dssp CSCTTCBHHHHHHHHHHHHHHHHHHHHTCGGGGGGGEE
T ss_pred CccccChHHHHHHHHHHHHHHHHHHHcCCCCCceECcc
Confidence 99999999999999999999999999999999999864
No 12
>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A
Probab=100.00 E-value=1.2e-63 Score=491.25 Aligned_cols=299 Identities=22% Similarity=0.262 Sum_probs=263.6
Q ss_pred HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecC--CccccHHHHHHhhccCCcEEEEccccccccChhHHh
Q 016620 29 WINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (386)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~--~~~~~~~~l~~l~~l~~k~i~~~~~G~d~id~~~~~ 106 (386)
..+.|++.++++.+..... .+.+++.+.+. ++|++++.. ..++++++++++|+| |+|++.|+|+|+||+++|+
T Consensus 32 ~~~~L~~~g~ev~~~~~~~--~~~~~~~~~~~-~ad~li~~~~~~~~~~~~~l~~~p~L--k~i~~~g~G~d~id~~~a~ 106 (351)
T 3jtm_A 32 IRDWLESQGHQYIVTDDKE--GPDCELEKHIP-DLHVLISTPFHPAYVTAERIKKAKNL--KLLLTAGIGSDHIDLQAAA 106 (351)
T ss_dssp CHHHHHHTTCEEEEESCCS--STTSHHHHHTT-TCSEEEECTTSCCCBCHHHHHHCSSC--CEEEESSSCCTTBCHHHHH
T ss_pred HHHHHHHCCCEEEEeCCCC--CCHHHHHHHhC-CCEEEEEccCCCCCCCHHHHhhCCCC--eEEEEeCeeecccCHHHHH
Confidence 4677888899987655433 25568888887 599999864 356899999999988 9999999999999999999
Q ss_pred hCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHh
Q 016620 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (386)
Q Consensus 107 ~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~ 186 (386)
++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.. ......+.+++|+||||||+|.||+++|++| +
T Consensus 107 ~~gI~V~n~~g~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~-~~~~~~~~~l~gktvGIIG~G~IG~~vA~~l-~ 184 (351)
T 3jtm_A 107 AAGLTVAEVTGSNVVSVAEDELMRILILMRNFVPGYNQVVKGEWNV-AGIAYRAYDLEGKTIGTVGAGRIGKLLLQRL-K 184 (351)
T ss_dssp HTTCEEEECTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCH-HHHHTTCCCSTTCEEEEECCSHHHHHHHHHH-G
T ss_pred hcCeeEEECCCcCchHHHHHHHHHHHHHhhCcHHHHHHHHcCCCcc-ccccCCcccccCCEEeEEEeCHHHHHHHHHH-H
Confidence 9999999999999999999999999999999999999999998752 1111235789999999999999999999997 7
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCc
Q 016620 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEA 266 (386)
Q Consensus 187 ~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~ga 266 (386)
+|||+|++||++....... ...+ .....++++++++||+|++|+|+|++|+++|+++.|+.||+|+
T Consensus 185 ~~G~~V~~~dr~~~~~~~~---------~~~g-----~~~~~~l~ell~~aDvV~l~~Plt~~t~~li~~~~l~~mk~ga 250 (351)
T 3jtm_A 185 PFGCNLLYHDRLQMAPELE---------KETG-----AKFVEDLNEMLPKCDVIVINMPLTEKTRGMFNKELIGKLKKGV 250 (351)
T ss_dssp GGCCEEEEECSSCCCHHHH---------HHHC-----CEECSCHHHHGGGCSEEEECSCCCTTTTTCBSHHHHHHSCTTE
T ss_pred HCCCEEEEeCCCccCHHHH---------HhCC-----CeEcCCHHHHHhcCCEEEECCCCCHHHHHhhcHHHHhcCCCCC
Confidence 9999999999875321110 1111 2234689999999999999999999999999999999999999
Q ss_pred EEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCCCCeEEcCCCCCCcHHHHHHHHHHHHHHHHHHHc
Q 016620 267 ILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWTREGMATLAALNVLGKIK 345 (386)
Q Consensus 267 ilIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t~~~~~~~~~~~~~ni~~~~~ 345 (386)
+|||+|||+++|++||+++|++|+|.||+||||++||++. +|||++|||++|||+||.|.+++.++.+.+++|+.+|++
T Consensus 251 ilIN~aRG~~vde~aL~~aL~~g~i~ga~lDV~~~EP~~~~~pL~~~~nvilTPHia~~t~ea~~~~~~~~~~nl~~~~~ 330 (351)
T 3jtm_A 251 LIVNNARGAIMERQAVVDAVESGHIGGYSGDVWDPQPAPKDHPWRYMPNQAMTPHTSGTTIDAQLRYAAGTKDMLERYFK 330 (351)
T ss_dssp EEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCGGGSHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECcCchhhCHHHHHHHHHhCCccEEEeCCCCCCCCCCCChhhcCCCEEECCcCCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 9999999999999999999999999999999999999875 699999999999999999999999999999999999999
Q ss_pred CCC
Q 016620 346 GYP 348 (386)
Q Consensus 346 g~~ 348 (386)
|++
T Consensus 331 g~~ 333 (351)
T 3jtm_A 331 GED 333 (351)
T ss_dssp TCC
T ss_pred CCC
Confidence 996
No 13
>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*
Probab=100.00 E-value=1.1e-62 Score=482.52 Aligned_cols=314 Identities=28% Similarity=0.402 Sum_probs=268.7
Q ss_pred cEEEEeCCCC-chHHHHHHHhC--CCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEE
Q 016620 16 YRVVSTKPMP-GTRWINLLIEQ--DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (386)
Q Consensus 16 ~~vlvt~~~~-~~~~~~~l~~~--~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~ 92 (386)
|||++....+ ...+.+.+++. +.++.+.... ..+++.+.+. ++|+++++...++++++++++++.++|+|++
T Consensus 2 mkil~~~~~~~~~~~~~~l~~~~p~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 76 (333)
T 1j4a_A 2 TKIFAYAIREDEKPFLKEWEDAHKDVEVEYTDKL----LTPETVALAK-GADGVVVYQQLDYIAETLQALADNGITKMSL 76 (333)
T ss_dssp CEEEECSCCGGGHHHHHHHHHTCTTSEEEECSSC----CCTTTGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred cEEEEEecCccCHHHHHHHHhhCCCcEEEECCCC----CcHHHHHHhc-CCcEEEEcCCCCCCHHHHHhccccCCeEEEE
Confidence 5777754322 23466777654 4455443221 1235555554 5999998877789999999999834499999
Q ss_pred ccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016620 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (386)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG 172 (386)
.|+|+|+||+++++++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|. |.. ..+++++|++|||||
T Consensus 77 ~~~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~--~~~~~l~g~~vgIiG 153 (333)
T 1j4a_A 77 RNVGVDNIDMAKAKELGFQITNVPVYSPNAIAEHAAIQAARILRQDKAMDEKVARHDLR-WAP--TIGREVRDQVVGVVG 153 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHHTHHHHHHHHHTTBCC-CTT--CCBCCGGGSEEEEEC
T ss_pred CCcccccccHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHHcCHHHHHHHHHcCCCc-cCC--cccccCCCCEEEEEc
Confidence 99999999999999999999999999999999999999999999999999999999985 643 356899999999999
Q ss_pred cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhh
Q 016620 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (386)
Q Consensus 173 ~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~ 252 (386)
+|.||+.+|+++ ++|||+|++||++....... . .....++++++++||+|++|+|++++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~------------~-----~~~~~~l~ell~~aDvV~l~~p~~~~t~~ 215 (333)
T 1j4a_A 154 TGHIGQVFMQIM-EGFGAKVITYDIFRNPELEK------------K-----GYYVDSLDDLYKQADVISLHVPDVPANVH 215 (333)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCHHHHH------------T-----TCBCSCHHHHHHHCSEEEECSCCCGGGTT
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCcchhHHh------------h-----CeecCCHHHHHhhCCEEEEcCCCcHHHHH
Confidence 999999999997 79999999999987543110 0 11123899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC--CC--------C----CCCCCCCeEEc
Q 016620 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MK--------P----GLSEMKNAIVV 318 (386)
Q Consensus 253 li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~--~~--------~----~L~~~~nvilT 318 (386)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||. +. + |||++|||++|
T Consensus 216 li~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~l~~~~~~~~~~~p~~~~L~~~~nvilT 295 (333)
T 1j4a_A 216 MINDESIAKMKQDVVIVNVSRGPLVDTDAVIRGLDSGKIFGYAMDVYEGEVGIFNEDWEGKEFPDARLADLIARPNVLVT 295 (333)
T ss_dssp CBSHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTCTTTTTSBCTTSCCSCHHHHHHHHCTTEEEC
T ss_pred HHhHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCceEEEEecCCCCCCccccccccccCCccchhhHHhCCCEEEC
Confidence 9999999999999999999999999999999999999999999999999993 32 1 59999999999
Q ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 319 PHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 319 PHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
||+||+|.++++++.+.+++||.+|++|+++.|.||.
T Consensus 296 PHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~~ 332 (333)
T 1j4a_A 296 PKTAFYTTHAVRNMVVKAFDNNLELVEGKEAETPVKV 332 (333)
T ss_dssp SSCTTCBHHHHHHHHHHHHHHHHHHHTTCCCSSBCCC
T ss_pred CccccCHHHHHHHHHHHHHHHHHHHHcCCCCCccccC
Confidence 9999999999999999999999999999999999874
No 14
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=100.00 E-value=5.1e-63 Score=480.59 Aligned_cols=307 Identities=20% Similarity=0.233 Sum_probs=261.7
Q ss_pred CCCcEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEE
Q 016620 13 NGKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (386)
Q Consensus 13 ~~~~~vlvt~~~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~ 91 (386)
++.|||++..+.+ ++.|.+.+++..+++++....+. + . .++|+++++. .+++++++ |+| |+|+
T Consensus 1 ~~~mkil~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~-----~----~-~~ad~~i~~~---~~~~~l~~-~~L--k~I~ 64 (315)
T 3pp8_A 1 SNAMEIIFYHPTFNAAWWVNALEKALPHARVREWKVG-----D----N-NPADYALVWQ---PPVEMLAG-RRL--KAVF 64 (315)
T ss_dssp CCCEEEEEECSSSCHHHHHHHHHHHSTTEEEEECCTT-----C----C-SCCSEEEESS---CCHHHHTT-CCC--SEEE
T ss_pred CCceEEEEEcCCCchHHHHHHHHHHCCCCEEEecCCC-----C----c-cCcEEEEECC---CCHHHhCC-CCc--eEEE
Confidence 4568999877654 45688888887777776544321 1 1 2699999874 36889988 887 9999
Q ss_pred Ecccccccc-C-hhH---HhhCCcEEecCCCCC-chhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCC
Q 016620 92 NMAVGYNNV-D-VNA---ANKYGIAVGNTPGVL-TETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (386)
Q Consensus 92 ~~~~G~d~i-d-~~~---~~~~gI~v~n~~~~~-~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g 165 (386)
+.|+|+|+| | +++ +.++||.|+|+++++ +.+||||+++++|++.|++..+++.+++|.|..+ .+++++|
T Consensus 65 ~~~aG~d~i~d~~~a~~~~~~~gi~v~~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~~-----~~~~l~g 139 (315)
T 3pp8_A 65 VLGAGVDAILSKLNAHPEMLDASIPLFRLEDTGMGLQMQEYAVSQVLHWFRRFDDYQALKNQALWKPL-----PEYTREE 139 (315)
T ss_dssp ESSSCCHHHHHHHHHCTTSSCTTSCEEEC--CCCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCC-----CCCCSTT
T ss_pred ECCEecccccchhhhhhhhhcCCCEEEEcCCCCccHHHHHHHHHHHHHHHhCChHHHHHHHhcccCCC-----CCCCcCC
Confidence 999999999 7 876 688999999999874 7999999999999999999999999999987643 3578999
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
+||||||+|.||+++|+++ ++|||+|++||++..... +. .......+++|++++||+|++|+|
T Consensus 140 ~tvGIiG~G~IG~~vA~~l-~~~G~~V~~~dr~~~~~~--------------~~--~~~~~~~~l~ell~~aDiV~l~~P 202 (315)
T 3pp8_A 140 FSVGIMGAGVLGAKVAESL-QAWGFPLRCWSRSRKSWP--------------GV--ESYVGREELRAFLNQTRVLINLLP 202 (315)
T ss_dssp CCEEEECCSHHHHHHHHHH-HTTTCCEEEEESSCCCCT--------------TC--EEEESHHHHHHHHHTCSEEEECCC
T ss_pred CEEEEEeeCHHHHHHHHHH-HHCCCEEEEEcCCchhhh--------------hh--hhhcccCCHHHHHhhCCEEEEecC
Confidence 9999999999999999997 799999999998764310 00 001112589999999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCCCCeEEcCCCCCC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASA 324 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~ 324 (386)
+|++|+++|+++.|++||+|++|||+|||+++|++||+++|++|++.||+||||++||++. +|||++|||++|||+||+
T Consensus 203 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~gA~lDV~~~EPl~~~~pL~~~~nvilTPHia~~ 282 (315)
T 3pp8_A 203 NTAQTVGIINSELLDQLPDGAYVLNLARGVHVQEADLLAALDSGKLKGAMLDVFSQEPLPQESPLWRHPRVAMTPHIAAV 282 (315)
T ss_dssp CCGGGTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCGGGGCTTEEECSSCSSC
T ss_pred CchhhhhhccHHHHhhCCCCCEEEECCCChhhhHHHHHHHHHhCCccEEEcCCCCCCCCCCCChhhcCCCEEECCCCCcc
Confidence 9999999999999999999999999999999999999999999999999999999999875 799999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcC
Q 016620 325 SKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPF 359 (386)
Q Consensus 325 t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~~~~ 359 (386)
|.+ +++.+.+++||.+|++|+++.|.||.-++|
T Consensus 283 t~~--~~~~~~~~~ni~~~~~G~~~~~~V~~~~GY 315 (315)
T 3pp8_A 283 TRP--AEAIDYISRTITQLEKGEPVTGQVDRARGY 315 (315)
T ss_dssp CCH--HHHHHHHHHHHHHHHHTCCCCCBCCCC---
T ss_pred cHH--HHHHHHHHHHHHHHHcCCCCCceECcccCC
Confidence 985 689999999999999999999999987665
No 15
>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.3e-62 Score=478.68 Aligned_cols=311 Identities=29% Similarity=0.442 Sum_probs=268.5
Q ss_pred CCCcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEE
Q 016620 13 NGKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (386)
Q Consensus 13 ~~~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~ 92 (386)
++++||+++.++++. ..+.+++.++++.... ..+.+++.+.+. ++|+++++...++++++++++|+| |+|++
T Consensus 24 ~~~~~vli~~~~~~~-~~~~l~~~~~~v~~~~----~~~~~~~~~~~~-~~d~li~~~~~~~~~~~l~~~~~L--k~I~~ 95 (335)
T 2g76_A 24 ANLRKVLISDSLDPC-CRKILQDGGLQVVEKQ----NLSKEELIAELQ-DCEGLIVRSATKVTADVINAAEKL--QVVGR 95 (335)
T ss_dssp --CCEEEECSCCCHH-HHHHHHHHTCEEEECC----SCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCSSC--CEEEE
T ss_pred ccceEEEEcCCCCHH-HHHHHHhCCCEEEECC----CCCHHHHHHHhc-CceEEEEcCCCCCCHHHHhhCCCC--cEEEE
Confidence 345689998887653 4677777666665422 247888888776 599999887778999999999988 99999
Q ss_pred ccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016620 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (386)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG 172 (386)
.|+|+|+||+++++++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|.. ..+.+.+++|++|||||
T Consensus 96 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~W~~---~~~~~~~l~g~tvgIIG 172 (335)
T 2g76_A 96 AGTGVDNVDLEAATRKGILVMNTPNGNSLSAAELTCGMIMCLARQIPQATASMKDGKWER---KKFMGTELNGKTLGILG 172 (335)
T ss_dssp SSSSCTTBCHHHHHHHTCEEECCSSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCT---GGGCBCCCTTCEEEEEC
T ss_pred CCCCcchhChHHHHhCCeEEEECCCccchHHHHHHHHHHHHHHhchHHHHHHHHcCCCCc---cCCCCcCCCcCEEEEEe
Confidence 999999999999999999999999999999999999999999999999999999998742 22456899999999999
Q ss_pred cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhh
Q 016620 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (386)
Q Consensus 173 ~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~ 252 (386)
+|.||+.+|+++ ++|||+|++||++...... ...+ . ...++++++++||+|++|+|++++|++
T Consensus 173 lG~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~----------~~~g-----~-~~~~l~ell~~aDvV~l~~P~t~~t~~ 235 (335)
T 2g76_A 173 LGRIGREVATRM-QSFGMKTIGYDPIISPEVS----------ASFG-----V-QQLPLEEIWPLCDFITVHTPLLPSTTG 235 (335)
T ss_dssp CSHHHHHHHHHH-HTTTCEEEEECSSSCHHHH----------HHTT-----C-EECCHHHHGGGCSEEEECCCCCTTTTT
T ss_pred ECHHHHHHHHHH-HHCCCEEEEECCCcchhhh----------hhcC-----c-eeCCHHHHHhcCCEEEEecCCCHHHHH
Confidence 999999999997 7999999999998654211 1111 1 135899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHHHH
Q 016620 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGM 332 (386)
Q Consensus 253 li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~ 332 (386)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|++.||+||||++||.+++|||++|||++|||++++|.++++++
T Consensus 236 li~~~~l~~mk~gailIN~arg~vvd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~L~~~~nvilTPH~~~~t~e~~~~~ 315 (335)
T 2g76_A 236 LLNDNTFAQCKKGVRVVNCARGGIVDEGALLRALQSGQCAGAALDVFTEEPPRDRALVDHENVISCPHLGASTKEAQSRC 315 (335)
T ss_dssp SBCHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCSCCHHHHSTTEEECSSCTTCBHHHHHHH
T ss_pred hhCHHHHhhCCCCcEEEECCCccccCHHHHHHHHHhCCccEEEEeecCCCCCCCchHHhCCCEEECCcCCCCCHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999976789999999999999999999999999
Q ss_pred HHHHHHHHHHHHcCCCCCC
Q 016620 333 ATLAALNVLGKIKGYPIWG 351 (386)
Q Consensus 333 ~~~~~~ni~~~~~g~~~~~ 351 (386)
.+.+++|+.+|++|+++.|
T Consensus 316 ~~~~~~nl~~~~~g~~~~n 334 (335)
T 2g76_A 316 GEEIAVQFVDMVKGKSLTG 334 (335)
T ss_dssp HHHHHHHHHHHC-------
T ss_pred HHHHHHHHHHHHcCCCCCC
Confidence 9999999999999999876
No 16
>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}
Probab=100.00 E-value=3.2e-63 Score=489.69 Aligned_cols=312 Identities=22% Similarity=0.322 Sum_probs=260.0
Q ss_pred CcEEEEeCCCCc-------hHHHHHHHhCCCeEEEecCCCCCCCHHHHHH-HhcCCCcEEEecCCccccHHHHHHhhccC
Q 016620 15 KYRVVSTKPMPG-------TRWINLLIEQDCRVEICTQKKTILSVEDIIA-LIGDKCDGVIGQLTEDWGETLFAALSRAG 86 (386)
Q Consensus 15 ~~~vlvt~~~~~-------~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~-~~~~~ad~vi~~~~~~~~~~~l~~l~~l~ 86 (386)
.+++++..+.+. +...+.|++. +++... . ..+.+++.+ .+. ++++++.. .++++++++++|+|
T Consensus 27 ~r~ivll~~~~~~~~~~~~~~~~~~L~~~-~~v~~~--~--~~~~~e~~~~~~~-~~~~i~~~--~~i~~~~l~~~p~L- 97 (365)
T 4hy3_A 27 ERPLAISAPEPRSLDLIFSDEARAALHSK-YEIVEA--D--PENIAGLGDDILG-RARYIIGQ--PPLSAETLARMPAL- 97 (365)
T ss_dssp -CCEEEEECTTSCHHHHCCHHHHHHHHHH-SEEEEC--C--GGGGGGSCTTHHH-HEEEEEEC--CCCCHHHHTTCTTC-
T ss_pred CCCEEEEcCCcccccccCCHHHHHHHhCC-cEEEEC--C--CCChHHHHHHhhC-CeEEEEeC--CCCCHHHHhhCCCC-
Confidence 345655544432 2235667665 455421 1 123444432 233 47777753 57999999999998
Q ss_pred CcEEEEc-cccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCC-cccccccC
Q 016620 87 GKAFSNM-AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPN-LFVGNLLK 164 (386)
Q Consensus 87 ~k~i~~~-~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~-~~~g~~l~ 164 (386)
|+|+.. |+|+|+||+++|+++||.|+|+|++++.+||||+++++|++.|++..+++.+++|.|. |... ...+.+++
T Consensus 98 -k~I~~~~~~G~d~iD~~~a~~~GI~V~n~~~~~~~~vAE~~l~l~L~~~R~~~~~~~~~r~g~~~-w~~~~~~~~~~l~ 175 (365)
T 4hy3_A 98 -RSILNVESNLLNNMPYEVLFQRGIHVVTTGQVFAEPVAEIGLGFALALARGIVDADIAFQEGTEL-WGGEGNASARLIA 175 (365)
T ss_dssp -CEEECCSSSCCSCSCTTHHHHSCCEEEECGGGGHHHHHHHHHHHHHHHHHTTTHHHHHHHHTCCC-CSSSSTTSCCCSS
T ss_pred -eEEEEecccccCcccHHHHhcCCeEEEeCCCccchHHHHHHHHHHHHHHhchhHHHHHHHcCCcc-ccccccccccccC
Confidence 999975 8999999999999999999999999999999999999999999999999999999974 6432 24578999
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
|+||||||+|.||+.+|+++ ++|||+|++||++...... ...+ . ...+++|++++||+|++|+
T Consensus 176 gktvGIIGlG~IG~~vA~~l-~~fG~~V~~~d~~~~~~~~----------~~~g-----~-~~~~l~ell~~aDvV~l~~ 238 (365)
T 4hy3_A 176 GSEIGIVGFGDLGKALRRVL-SGFRARIRVFDPWLPRSML----------EENG-----V-EPASLEDVLTKSDFIFVVA 238 (365)
T ss_dssp SSEEEEECCSHHHHHHHHHH-TTSCCEEEEECSSSCHHHH----------HHTT-----C-EECCHHHHHHSCSEEEECS
T ss_pred CCEEEEecCCcccHHHHHhh-hhCCCEEEEECCCCCHHHH----------hhcC-----e-eeCCHHHHHhcCCEEEEcC
Confidence 99999999999999999997 7999999999998643211 1111 1 2468999999999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCCCCeEEcCCCCC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIAS 323 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~ 323 (386)
|++++|+++|+++.|+.||+|++|||+|||++||++||+++|++|+|. |+||||++||++. +|||++|||++|||+||
T Consensus 239 Plt~~T~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~-aaLDV~~~EPl~~~~pL~~~~nvilTPHia~ 317 (365)
T 4hy3_A 239 AVTSENKRFLGAEAFSSMRRGAAFILLSRADVVDFDALMAAVSSGHIV-AASDVYPEEPLPLDHPVRSLKGFIRSAHRAG 317 (365)
T ss_dssp CSSCC---CCCHHHHHTSCTTCEEEECSCGGGSCHHHHHHHHHTTSSE-EEESCCSSSSCCTTCGGGTCTTEEECCSCSS
T ss_pred cCCHHHHhhcCHHHHhcCCCCcEEEECcCCchhCHHHHHHHHHcCCce-EEeeCCCCCCCCCCChhhcCCCEEECCcccc
Confidence 999999999999999999999999999999999999999999999998 8999999999864 69999999999999999
Q ss_pred CcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 324 ASKWTREGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 324 ~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
+|.++++++...+++||.+|++|+|+.++||.
T Consensus 318 ~t~e~~~~~~~~~~~ni~~~~~G~~~~~~vn~ 349 (365)
T 4hy3_A 318 ALDSAFKKMGDMVLEDMDLMDRGLPPMRCKRA 349 (365)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCCCCSSEEC
T ss_pred CHHHHHHHHHHHHHHHHHHHHcCCCccccccc
Confidence 99999999999999999999999999999974
No 17
>1xdw_A NAD+-dependent (R)-2-hydroxyglutarate dehydrogenase; structural variant of the BAB rossmann fold, oxidoreductase; 1.98A {Acidaminococcus fermentans}
Probab=100.00 E-value=1.2e-62 Score=481.87 Aligned_cols=313 Identities=20% Similarity=0.287 Sum_probs=269.4
Q ss_pred cEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEE
Q 016620 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (386)
Q Consensus 16 ~~vlvt~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~ 92 (386)
|||++.. +.+ ..+++.+.+ .+.++.+... ..+.+++.+.+. ++|+++++...++++++++++++.|+|+|++
T Consensus 1 mki~~~~~~~~~-~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 75 (331)
T 1xdw_A 1 MKVLCYGVRDVE-LPIFEACNKEFGYDIKCVPD---YLNTKETAEMAA-GFDAVILRGNCFANKQNLDIYKKLGVKYILT 75 (331)
T ss_dssp CEEEECSCCTTT-HHHHHHHGGGTCCEEEECSC---CSCSHHHHHTTT-TCSEEEECTTCCBCHHHHHHHHHHTCCEEEE
T ss_pred CEEEEEecCccC-HHHHHHHHHhcCeEEEECCC---CCCHHHHHHHhc-CCeEEEEeCCCCCCHHHHhhCcccCceEEEE
Confidence 5777743 333 345676644 4555544221 234467766665 5999999877789999999999844599999
Q ss_pred ccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016620 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (386)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG 172 (386)
.|+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. |.. ...++++.|++|||||
T Consensus 76 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~-~~~~~~l~g~~vgIiG 153 (331)
T 1xdw_A 76 RTAGTDHIDKEYAKELGFPMAFVPRYSPNAIAELAVTQAMMLLRHTAYTTSRTAKKNFK-VDA-FMFSKEVRNCTVGVVG 153 (331)
T ss_dssp SSSCCTTBCHHHHHHTTCCEECCCCCCHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCC-CCS-TTCCCCGGGSEEEEEC
T ss_pred ccccccccCHHHHHhCCcEEEeCCCCCcHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCc-ccc-CcCccCCCCCEEEEEC
Confidence 99999999999999999999999999999999999999999999999999999999985 622 2356899999999999
Q ss_pred cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhh
Q 016620 173 AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYH 252 (386)
Q Consensus 173 ~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~ 252 (386)
+|.||+.+|+++ ++|||+|++||++..... ... ....++++++++||+|++|+|++++|++
T Consensus 154 ~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~----------------~~~--~~~~~l~ell~~aDvV~~~~p~t~~t~~ 214 (331)
T 1xdw_A 154 LGRIGRVAAQIF-HGMGATVIGEDVFEIKGI----------------EDY--CTQVSLDEVLEKSDIITIHAPYIKENGA 214 (331)
T ss_dssp CSHHHHHHHHHH-HHTTCEEEEECSSCCCSC----------------TTT--CEECCHHHHHHHCSEEEECCCCCTTTCC
T ss_pred cCHHHHHHHHHH-HHCCCEEEEECCCccHHH----------------Hhc--cccCCHHHHHhhCCEEEEecCCchHHHH
Confidence 999999999997 799999999999764310 000 1245899999999999999999999999
Q ss_pred cccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC--CC--------C----CCCCC-CCeEE
Q 016620 253 LINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY--MK--------P----GLSEM-KNAIV 317 (386)
Q Consensus 253 li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~--~~--------~----~L~~~-~nvil 317 (386)
+|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||+ +. + |||++ |||++
T Consensus 215 li~~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~~L~~~~~nvil 294 (331)
T 1xdw_A 215 VVTRDFLKKMKDGAILVNCARGQLVDTEAVIEAVESGKLGGYGCDVLDGEASVFGKDLEGQKLENPLFEKLVDLYPRVLI 294 (331)
T ss_dssp SBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTGGGTTTCCCTTSCCSSHHHHHHHHTTTTEEE
T ss_pred HhCHHHHhhCCCCcEEEECCCcccccHHHHHHHHHhCCceEEEEecCCCCCCcccccccccccCccchHHHHhCCCCEEE
Confidence 9999999999999999999999999999999999999999999999999994 21 2 69999 99999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016620 318 VPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (386)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 354 (386)
|||+||+|.++++++.+.+++||.+|++|+++.|.||
T Consensus 295 TPHia~~t~~~~~~~~~~~~~nl~~~~~g~~~~~~v~ 331 (331)
T 1xdw_A 295 TPHLGSYTDEAVKNMVEVSYQNLKDLAETGDCPNKIK 331 (331)
T ss_dssp CCSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTBCC
T ss_pred cCccccChHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Confidence 9999999999999999999999999999999999886
No 18
>2cuk_A Glycerate dehydrogenase/glyoxylate reductase; structural genomics, riken structur genomics/proteomics initiative, RSGI, NPPSFA; HET: NHE; 2.00A {Thermus thermophilus}
Probab=100.00 E-value=1.3e-61 Score=470.54 Aligned_cols=309 Identities=38% Similarity=0.574 Sum_probs=276.3
Q ss_pred cEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEccc
Q 016620 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (386)
Q Consensus 16 ~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~ 95 (386)
|||+++.+++++ ..+.+++.++++++.... ..+.+++.+.+. ++|+++++..+++++++++++|+| |+|++.|+
T Consensus 1 ~~vl~~~~~~~~-~~~~l~~~g~~v~~~~~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~i~~~~~ 74 (311)
T 2cuk_A 1 MRVLVTRTLPGK-ALDRLRERGLEVEVHRGL--FLPKAELLKRVE-GAVGLIPTVEDRIDAEVMDRAKGL--KVIACYSV 74 (311)
T ss_dssp CEEEESSCCSSS-TTHHHHHTTCEEEECCSS--CCCHHHHHHHHT-TCSEEECCTTSCBCHHHHHHSTTC--CEEECSSS
T ss_pred CEEEEeCCCCHH-HHHHHHhcCCeEEEecCC--CCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEECCc
Confidence 578888777664 357777776777654322 357888888876 599999887678999999999988 99999999
Q ss_pred cccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh
Q 016620 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (386)
Q Consensus 96 G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~ 175 (386)
|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+....+.++.|++|||||+|.
T Consensus 75 G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G~ 154 (311)
T 2cuk_A 75 GVDHVDLEAARERGIRVTHTPGVLTEATADLTLALLLAVARRVVEGAAYARDGLWKAWHPELLLGLDLQGLTLGLVGMGR 154 (311)
T ss_dssp CCTTBCHHHHHTTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCSH
T ss_pred CccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHcChHHHHHHHHcCCCCccccccccCcCCCCCEEEEEEECH
Confidence 99999999999999999999999999999999999999999999999999999997664433457899999999999999
Q ss_pred hHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhccc
Q 016620 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (386)
Q Consensus 176 IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~ 255 (386)
||+.+|+++ ++||++|++||++.... . ....++++++++||+|++|+|++++|+++|+
T Consensus 155 IG~~~A~~l-~~~G~~V~~~d~~~~~~-----------------~----~~~~~l~ell~~aDvV~l~~p~~~~t~~li~ 212 (311)
T 2cuk_A 155 IGQAVAKRA-LAFGMRVVYHARTPKPL-----------------P----YPFLSLEELLKEADVVSLHTPLTPETHRLLN 212 (311)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCSS-----------------S----SCBCCHHHHHHHCSEEEECCCCCTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCCccc-----------------c----cccCCHHHHHhhCCEEEEeCCCChHHHhhcC
Confidence 999999997 79999999999976431 0 1246899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCCCCCCCCeEEcCCCCCCcHHHHHHHHH
Q 016620 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREGMAT 334 (386)
Q Consensus 256 ~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~~~~~~~~~ 334 (386)
++.|+.||+|+++||+|||+++|+++|.++|+ |++.||++|||++||++ +++||++||+++|||++++|.++++++.+
T Consensus 213 ~~~l~~mk~ga~lin~srg~~vd~~aL~~aL~-g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~~~ 291 (311)
T 2cuk_A 213 RERLFAMKRGAILLNTARGALVDTEALVEALR-GHLFGAGLDVTDPEPLPPGHPLYALPNAVITPHIGSAGRTTRERMAE 291 (311)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHT-TTSSEEEESSCSSSSCCTTSGGGGCTTEEECCSCTTCBHHHHHHHHH
T ss_pred HHHHhhCCCCcEEEECCCCCccCHHHHHHHHh-CcCCEEEEeeCCCCCCCCCChhhhCCCEEECCcCCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999 99999999999999975 47999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCC
Q 016620 335 LAALNVLGKIKGYPIWGNP 353 (386)
Q Consensus 335 ~~~~ni~~~~~g~~~~~~v 353 (386)
.+++|+.+|++|+++.|.|
T Consensus 292 ~~~~nl~~~~~g~~~~~~v 310 (311)
T 2cuk_A 292 VAVENLLAVLEGREPPNPV 310 (311)
T ss_dssp HHHHHHHHHHTTCCCSSBC
T ss_pred HHHHHHHHHHcCCCCCCcc
Confidence 9999999999999988765
No 19
>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.8e-63 Score=484.90 Aligned_cols=312 Identities=25% Similarity=0.373 Sum_probs=267.8
Q ss_pred cEEEEeC--CCCchHHHHHHHh-CCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEE
Q 016620 16 YRVVSTK--PMPGTRWINLLIE-QDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSN 92 (386)
Q Consensus 16 ~~vlvt~--~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~ 92 (386)
|||++.. +.+ ..+++.+.+ .+.++.+.... ..+++.+.+. ++|+++++...++++++++++++.++|+|++
T Consensus 1 Mkil~~~~~~~~-~~~~~~l~~~~~~~v~~~~~~----~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~~Lk~I~~ 74 (333)
T 1dxy_A 1 MKIIAYGARVDE-IQYFKQWAKDTGNTLEYHTEF----LDENTVEWAK-GFDGINSLQTTPYAAGVFEKMHAYGIKFLTI 74 (333)
T ss_dssp CEEEECSCCTTT-HHHHHHHHHHHCCEEEECSSC----CCTTGGGGGT-TCSEEEECCSSCBCHHHHHHHHHTTCCEEEE
T ss_pred CEEEEEeccccC-HHHHHHHHHhCCeEEEEcCCC----ChHHHHHHhc-CCeEEEEcCCCCCCHHHHHhCcccCceEEEE
Confidence 5677743 333 345666643 46666543221 2235545454 5999999877789999999999834499999
Q ss_pred ccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCC-CCCcccccccCCCeEEEE
Q 016620 93 MAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGW-LPNLFVGNLLKGQTVGVI 171 (386)
Q Consensus 93 ~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w-~~~~~~g~~l~g~~vgIv 171 (386)
.|+|+|+||+++++++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|. | .. ..+.++.|++||||
T Consensus 75 ~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~~~--~~~~~l~g~~vgIi 151 (333)
T 1dxy_A 75 RNVGTDNIDMTAMKQYGIRLSNVPAYSPAAIAEFALTDTLYLLRNMGKVQAQLQAGDYE-KAGT--FIGKELGQQTVGVM 151 (333)
T ss_dssp SSSCCTTBCHHHHHHTTCEEECCTTSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCHH-HHTC--CCCCCGGGSEEEEE
T ss_pred cCcccCccCHHHHHhCCCEEEeCCCCCchHHHHHHHHHHHHHhhhHHHHHHHHHcCCcc-cccC--CCccCCCCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999984 5 22 35689999999999
Q ss_pred ecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhh
Q 016620 172 GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTY 251 (386)
Q Consensus 172 G~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~ 251 (386)
|+|.||+.+|+++ ++|||+|++||++..... ... ....++++++++||+|++|+|++++|+
T Consensus 152 G~G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~----------------~~~--~~~~~l~ell~~aDvV~~~~P~~~~t~ 212 (333)
T 1dxy_A 152 GTGHIGQVAIKLF-KGFGAKVIAYDPYPMKGD----------------HPD--FDYVSLEDLFKQSDVIDLHVPGIEQNT 212 (333)
T ss_dssp CCSHHHHHHHHHH-HHTTCEEEEECSSCCSSC----------------CTT--CEECCHHHHHHHCSEEEECCCCCGGGT
T ss_pred CcCHHHHHHHHHH-HHCCCEEEEECCCcchhh----------------Hhc--cccCCHHHHHhcCCEEEEcCCCchhHH
Confidence 9999999999997 799999999999764310 001 123589999999999999999999999
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC-----------CC---CCCCCCCCeEE
Q 016620 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-----------MK---PGLSEMKNAIV 317 (386)
Q Consensus 252 ~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~-----------~~---~~L~~~~nvil 317 (386)
++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||. ++ +|||++|||++
T Consensus 213 ~li~~~~l~~mk~ga~lIn~srg~~vd~~aL~~aL~~g~i~gA~LDV~~~EP~~~~~~~~~~~~~~~~~~pL~~~~nvi~ 292 (333)
T 1dxy_A 213 HIINEAAFNLMKPGAIVINTARPNLIDTQAMLSNLKSGKLAGVGIDTYEYETEDLLNLAKHGSFKDPLWDELLGMPNVVL 292 (333)
T ss_dssp TSBCHHHHHHSCTTEEEEECSCTTSBCHHHHHHHHHTTSEEEEEESSCTTHHHHHHHHHHHSSCCCHHHHHHHTCTTEEE
T ss_pred HHhCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCccEEEEecCCCCCCcccccccccccCccchhHHhcCCCEEE
Confidence 99999999999999999999999999999999999999999999999999983 22 37999999999
Q ss_pred cCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 318 VPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 318 TPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
|||+||+|.++++++.+.+++|+.+|++|+++.|.||.
T Consensus 293 TPHia~~t~e~~~~~~~~~~~nl~~~~~g~~~~~~v~~ 330 (333)
T 1dxy_A 293 SPHIAYYTETAVHNMVYFSLQHLVDFLTKGETSTEVTG 330 (333)
T ss_dssp CSSCTTCSHHHHHHHHHHHHHHHHHHHHHSCCTTEECC
T ss_pred CCccccChHHHHHHHHHHHHHHHHHHHcCCCCCceeCC
Confidence 99999999999999999999999999999999999875
No 20
>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A
Probab=100.00 E-value=5.2e-62 Score=485.35 Aligned_cols=323 Identities=21% Similarity=0.214 Sum_probs=272.7
Q ss_pred CCCcEEEEeCCC----Cch-HHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecC--CccccHHHHHHhhcc
Q 016620 13 NGKYRVVSTKPM----PGT-RWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRA 85 (386)
Q Consensus 13 ~~~~~vlvt~~~----~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~--~~~~~~~~l~~l~~l 85 (386)
+.+++++++... +.+ .+.+.|++.++++.+..... .+.+++.+.+. ++|++++.. ...+++++++++++|
T Consensus 38 ~~~~~v~l~~~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~--~~~~~l~~~l~-~ad~li~~~~~~~~i~~~~l~~~p~L 114 (393)
T 2nac_A 38 TPKAIDFTPGQLLGSVSGELGLRKYLESNGHTLVVTSDKD--GPDSVFERELV-DADVVISQPFWPAYLTPERIAKAKNL 114 (393)
T ss_dssp CCSCCSSCTTSCCSBTTTGGGCHHHHHHTTCEEEEESCCS--STTSHHHHHHT-TCSEEEEBTTBCCCBCHHHHHHCTTC
T ss_pred CCceEEEECccccccCchhhHHHHHHHhCCCEEEEecCCC--CCHHHHHHhcc-CCCEEEEcCccCCCCCHHHHhhCCCC
Confidence 333345555533 333 34467788888876543322 24457777776 599998763 357899999999988
Q ss_pred CCcEEEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCC
Q 016620 86 GGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (386)
Q Consensus 86 ~~k~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g 165 (386)
|+|++.|+|+|+||+++|+++||.|+|+|++++.+||||++++||++.|++..+++.+++|.|.. ......+.+++|
T Consensus 115 --k~I~~~g~G~d~iD~~aa~~~gI~V~n~~g~~~~~VAE~al~liL~~~R~~~~~~~~~~~g~W~~-~~~~~~~~~l~g 191 (393)
T 2nac_A 115 --KLALTAGIGSDHVDLQSAIDRNVTVAEVTYCNSISVAEHVVMMILSLVRNYLPSHEWARKGGWNI-ADCVSHAYDLEA 191 (393)
T ss_dssp --CEEEESSSCCTTBCHHHHHHTTCEEEECTTTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH-HHHHTTCCCCTT
T ss_pred --cEEEEcCccccccCHHHHhcCCEEEEeCCCcccHHHHHHHHHHHHHHHhccHHHHHHHHcCCCCc-cccccCCccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999998742 111123578999
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+|+++ ++|||+|++||++....... ...+ .....++++++++||+|++|+|
T Consensus 192 ktvGIIGlG~IG~~vA~~l-~a~G~~V~~~d~~~~~~~~~---------~~~G-----~~~~~~l~ell~~aDvV~l~~P 256 (393)
T 2nac_A 192 MHVGTVAAGRIGLAVLRRL-APFDVHLHYTDRHRLPESVE---------KELN-----LTWHATREDMYPVCDVVTLNCP 256 (393)
T ss_dssp CEEEEECCSHHHHHHHHHH-GGGTCEEEEECSSCCCHHHH---------HHHT-----CEECSSHHHHGGGCSEEEECSC
T ss_pred CEEEEEeECHHHHHHHHHH-HhCCCEEEEEcCCccchhhH---------hhcC-----ceecCCHHHHHhcCCEEEEecC
Confidence 9999999999999999997 79999999999876432110 0011 1223589999999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCCCCeEEcCCCCCC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASA 324 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~ 324 (386)
++++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++. +|||++|||++|||+|+.
T Consensus 257 lt~~t~~li~~~~l~~mk~gailIN~aRG~~vde~aL~~aL~~g~i~gA~lDV~~~EP~~~~~pL~~~~nvilTPHia~~ 336 (393)
T 2nac_A 257 LHPETEHMINDETLKLFKRGAYIVNTARGKLCDRDAVARALESGRLAGYAGDVWFPQPAPKDHPWRTMPYNGMTPHISGT 336 (393)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESCCSSSSCCTTCGGGTSTTBCCCCSCTTC
T ss_pred CchHHHHHhhHHHHhhCCCCCEEEECCCchHhhHHHHHHHHHcCCeeEEEEEecCCCCCCCCChhHcCCCEEECCCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999864 799999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCC
Q 016620 325 SKWTREGMATLAALNVLGKIKGYPIWGNPNQV 356 (386)
Q Consensus 325 t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~ 356 (386)
|.++++++...+++||++|++|+|+.|.++.+
T Consensus 337 T~e~~~~~~~~~~~nl~~~~~G~~~~~~~~~v 368 (393)
T 2nac_A 337 TLTAQARYAAGTREILECFFEGRPIRDEYLIV 368 (393)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHTCCCCGGGEEE
T ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCcceeEec
Confidence 99999999999999999999999999988743
No 21
>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=2e-60 Score=464.06 Aligned_cols=313 Identities=28% Similarity=0.465 Sum_probs=273.1
Q ss_pred cEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhc-cCCcEEEEcc
Q 016620 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSR-AGGKAFSNMA 94 (386)
Q Consensus 16 ~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~-l~~k~i~~~~ 94 (386)
+||+++.+++++ ..+.+++ .+++++... +...+.+++.+.+. ++|+++++..+++++++++++|+ | |+|++.|
T Consensus 2 ~~vl~~~~~~~~-~~~~l~~-~~~~~~~~~-~~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~~L--k~I~~~~ 75 (320)
T 1gdh_A 2 KKILITWPLPEA-AMARARE-SYDVIAHGD-DPKITIDEMIETAK-SVDALLITLNEKCRKEVIDRIPENI--KCISTYS 75 (320)
T ss_dssp CEEEESSCCCHH-HHHHHHT-TSEEEECCS-TTCCCHHHHHHHHT-TCSEEEEETTSCBCHHHHHHSCTTC--CEEEEES
T ss_pred cEEEEcCCCCHH-HHHHHHh-cCCEEEecC-CCCCCHHHHHHHhc-CCEEEEECCCCCCCHHHHHhCCccc--eEEEECC
Confidence 578888877664 4677765 346655332 22357888888886 59999988767899999999998 6 9999999
Q ss_pred ccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC
Q 016620 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (386)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G 174 (386)
+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|.+....+.++.|++|||||+|
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~~~~~~~~~~~l~g~~vgIIG~G 155 (320)
T 1gdh_A 76 IGFDHIDLDACKARGIKVGNAPHGVTVATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLELVGEKLDNKTLGIYGFG 155 (320)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCCSCHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCCTTTTCBCCCTTCEEEEECCS
T ss_pred cccccccHHHHHhCCcEEEEcCCCCHHHHHHHHHHHHHHHHccHHHHHHHHHcCCCCccccccccCcCCCCCEEEEECcC
Confidence 99999999999999999999999999999999999999999999999999999999766543446789999999999999
Q ss_pred hhHHHHHHHHHhcCCcEEEEEcC-ChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhc
Q 016620 175 RIGSAYARMMVEGFKMNLIYYDL-YQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (386)
Q Consensus 175 ~IG~~iA~~L~~~fg~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~l 253 (386)
.||+++|+++ ++||++|++||+ +....... ..+ .....++++++++||+|++|+|++++|+++
T Consensus 156 ~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~~~----------~~g-----~~~~~~l~ell~~aDvVil~~p~~~~t~~~ 219 (320)
T 1gdh_A 156 SIGQALAKRA-QGFDMDIDYFDTHRASSSDEA----------SYQ-----ATFHDSLDSLLSVSQFFSLNAPSTPETRYF 219 (320)
T ss_dssp HHHHHHHHHH-HTTTCEEEEECSSCCCHHHHH----------HHT-----CEECSSHHHHHHHCSEEEECCCCCTTTTTC
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCCcChhhhh----------hcC-----cEEcCCHHHHHhhCCEEEEeccCchHHHhh
Confidence 9999999997 799999999999 76542110 111 112348999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHHHHH
Q 016620 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMA 333 (386)
Q Consensus 254 i~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~~ 333 (386)
++++.|+.||+|++|||+|||+++|+++|.++|++|++.||++|||++||..++|||++|||++|||++++|.++++++.
T Consensus 220 i~~~~l~~mk~gailIn~arg~~vd~~aL~~aL~~g~i~gA~lDv~~~eP~~~~~L~~~~nviltPH~~~~t~~~~~~~~ 299 (320)
T 1gdh_A 220 FNKATIKSLPQGAIVVNTARGDLVDNELVVAALEAGRLAYAGFDVFAGEPNINEGYYDLPNTFLFPHIGSAATQAREDMA 299 (320)
T ss_dssp BSHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCTTTTSCCTTGGGCTTEEECSSCTTCBHHHHHHHH
T ss_pred cCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCcEEEEeCCCCCCCCCChhhhCCCEEECCcCCcCcHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999556799999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCC
Q 016620 334 TLAALNVLGKIKGYPIWG 351 (386)
Q Consensus 334 ~~~~~ni~~~~~g~~~~~ 351 (386)
..+ +||.+|++|+++..
T Consensus 300 ~~~-~nl~~~~~g~~~~~ 316 (320)
T 1gdh_A 300 HQA-NDLIDALFGGADMS 316 (320)
T ss_dssp HHH-HHHHHHHHTTSCCT
T ss_pred HHH-HHHHHHHcCCCCcc
Confidence 999 99999999988643
No 22
>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}
Probab=100.00 E-value=5.4e-61 Score=466.73 Aligned_cols=306 Identities=26% Similarity=0.441 Sum_probs=272.1
Q ss_pred CcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEcc
Q 016620 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (386)
Q Consensus 15 ~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~ 94 (386)
+|||+++.++++ .+.+.+++.++++.. . ...+.+++.+.+. ++|++++....++++++++++|+| |+|++.|
T Consensus 5 ~mkil~~~~~~~-~~~~~l~~~~~~v~~--~--~~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 76 (313)
T 2ekl_A 5 TVKALITDPIDE-ILIKTLREKGIQVDY--M--PEISKEELLNIIG-NYDIIVVRSRTKVTKDVIEKGKKL--KIIARAG 76 (313)
T ss_dssp CCEEEECSCCCH-HHHHHHHHTTCEEEE--C--TTCCHHHHHHHGG-GCSEEEECSSSCBCHHHHHHCTTC--CEEEECS
T ss_pred ceEEEEECCCCH-HHHHHHHhCCcEEEe--C--CCCCHHHHHHHhc-CCeEEEEcCCCCCCHHHHhhCCCC--eEEEEcC
Confidence 378999887765 456788877766532 2 1347788888776 599999876667999999999988 9999999
Q ss_pred ccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC
Q 016620 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (386)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G 174 (386)
+|+|++|+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ..+.++.|++|||||+|
T Consensus 77 ~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~-----~~~~~l~g~~vgIIG~G 151 (313)
T 2ekl_A 77 IGLDNIDTEEAEKRNIKVVYAPGASTDSAVELTIGLMIAAARKMYTSMALAKSGIFKK-----IEGLELAGKTIGIVGFG 151 (313)
T ss_dssp SCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTTCCCC-----CCCCCCTTCEEEEESCS
T ss_pred CCCCccCHHHHHhCCeEEEeCCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCC-----CCCCCCCCCEEEEEeeC
Confidence 9999999999999999999999999999999999999999999999999999998741 34679999999999999
Q ss_pred hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcc
Q 016620 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (386)
Q Consensus 175 ~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li 254 (386)
.||+++|+++ ++||++|++||++...... ...+ .. ..++++++++||+|++|+|++++|++++
T Consensus 152 ~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~----------~~~g-----~~-~~~l~ell~~aDvVvl~~P~~~~t~~li 214 (313)
T 2ekl_A 152 RIGTKVGIIA-NAMGMKVLAYDILDIREKA----------EKIN-----AK-AVSLEELLKNSDVISLHVTVSKDAKPII 214 (313)
T ss_dssp HHHHHHHHHH-HHTTCEEEEECSSCCHHHH----------HHTT-----CE-ECCHHHHHHHCSEEEECCCCCTTSCCSB
T ss_pred HHHHHHHHHH-HHCCCEEEEECCCcchhHH----------HhcC-----ce-ecCHHHHHhhCCEEEEeccCChHHHHhh
Confidence 9999999997 7999999999998754211 0111 11 2489999999999999999999999999
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCC---CCCCCCCeEEcCCCCCCcHHHHHH
Q 016620 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKP---GLSEMKNAIVVPHIASASKWTREG 331 (386)
Q Consensus 255 ~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~---~L~~~~nvilTPHia~~t~~~~~~ 331 (386)
+++.|+.||+|+++||+|||+++|+++|.++|++|++.||++|||++||++++ |||++|||++|||++++|.+++++
T Consensus 215 ~~~~l~~mk~ga~lIn~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~~~L~~~~nviltPH~~~~t~~~~~~ 294 (313)
T 2ekl_A 215 DYPQFELMKDNVIIVNTSRAVAVNGKALLDYIKKGKVYAYATDVFWNEPPKEEWELELLKHERVIVTTHIGAQTKEAQKR 294 (313)
T ss_dssp CHHHHHHSCTTEEEEESSCGGGBCHHHHHHHHHTTCEEEEEESCCSSSSCCSHHHHHHHHSTTEEECCSCTTCSHHHHHH
T ss_pred CHHHHhcCCCCCEEEECCCCcccCHHHHHHHHHcCCCcEEEEecCCCCCCCCcccchHhhCCCEEECCccCcCcHHHHHH
Confidence 99999999999999999999999999999999999999999999999999877 999999999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCC
Q 016620 332 MATLAALNVLGKIKGYPIW 350 (386)
Q Consensus 332 ~~~~~~~ni~~~~~g~~~~ 350 (386)
+.+.+++|+.+|++|+|+.
T Consensus 295 ~~~~~~~n~~~~~~g~~l~ 313 (313)
T 2ekl_A 295 VAEMTTQNLLNAMKELGMI 313 (313)
T ss_dssp HHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHcCCCCC
Confidence 9999999999999999874
No 23
>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.9e-60 Score=461.77 Aligned_cols=305 Identities=33% Similarity=0.536 Sum_probs=267.6
Q ss_pred CCcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEc
Q 016620 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (386)
Q Consensus 14 ~~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~ 93 (386)
++|||+++.+++++ ..+.+++.++++.. .. ..+.+++.+.+. ++|+++++...++++++++++|+| |+|++.
T Consensus 2 ~~~~il~~~~~~~~-~~~~l~~~~~~~~~--~~--~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~ 73 (307)
T 1wwk_A 2 KRMKVLVAAPLHEK-AIQVLKDAGLEVIY--EE--YPDEDRLVELVK-DVEAIIVRSKPKVTRRVIESAPKL--KVIARA 73 (307)
T ss_dssp --CEEEECSCCCHH-HHHHHHHTTCEEEE--CS--SCCHHHHHHHST-TCSEEEESSCSCBCHHHHTTCTTC--CEEEES
T ss_pred CceEEEEeCCCCHH-HHHHHHhCCeEEEe--CC--CCCHHHHHHHhc-CCEEEEEcCCCCCCHHHHhhCCCC--eEEEEC
Confidence 35789998877653 46778776666542 22 247788887776 599999876667999999999988 999999
Q ss_pred cccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016620 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (386)
Q Consensus 94 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~ 173 (386)
|+|+|+||+++++++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|.. ....+.++.|++|||||+
T Consensus 74 ~~G~d~id~~~~~~~gi~v~n~~g~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIiG~ 150 (307)
T 1wwk_A 74 GVGLDNIDVEAAKEKGIEVVNAPAASSRSVAELAVGLMFSVARKIAFADRKMREGVWAK---KEAMGIELEGKTIGIIGF 150 (307)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCGGGGHHHHHHHHHHHHHHHHTTHHHHHHHHTTTCCCT---TTCCBCCCTTCEEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCc---cCcCCcccCCceEEEEcc
Confidence 99999999999999999999999999999999999999999999999999999998752 123568999999999999
Q ss_pred ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhc
Q 016620 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (386)
Q Consensus 174 G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~l 253 (386)
|.||+++|+++ ++||++|++||++...... ...+ . ...++++++++||+|++|+|++++|+++
T Consensus 151 G~IG~~~A~~l-~~~G~~V~~~d~~~~~~~~----------~~~g-----~-~~~~l~ell~~aDvV~l~~p~~~~t~~l 213 (307)
T 1wwk_A 151 GRIGYQVAKIA-NALGMNILLYDPYPNEERA----------KEVN-----G-KFVDLETLLKESDVVTIHVPLVESTYHL 213 (307)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECSSCCHHHH----------HHTT-----C-EECCHHHHHHHCSEEEECCCCSTTTTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCCChhhH----------hhcC-----c-cccCHHHHHhhCCEEEEecCCChHHhhh
Confidence 99999999997 7999999999998754211 1111 1 1348999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCCCCCCCCeEEcCCCCCCcHHHHHHH
Q 016620 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAIVVPHIASASKWTREGM 332 (386)
Q Consensus 254 i~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvilTPHia~~t~~~~~~~ 332 (386)
|+++.|+.||+|++|||+|||+++|+++|.++|++|++.||++|||++||++ ++|||++||+++|||++++|.++++++
T Consensus 214 i~~~~l~~mk~ga~lin~arg~~vd~~aL~~aL~~g~i~ga~lDv~~~eP~~~~~~L~~~~nviltPh~~~~t~~~~~~~ 293 (307)
T 1wwk_A 214 INEERLKLMKKTAILINTSRGPVVDTNALVKALKEGWIAGAGLDVFEEEPLPKDHPLTKFDNVVLTPHIGASTVEAQERA 293 (307)
T ss_dssp BCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECSSCTTCBHHHHHHH
T ss_pred cCHHHHhcCCCCeEEEECCCCcccCHHHHHHHHHhCCCcEEEEecCCCCCCCCCChHHhCCCEEECCccccCcHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999984 579999999999999999999999999
Q ss_pred HHHHHHHHHHHHcC
Q 016620 333 ATLAALNVLGKIKG 346 (386)
Q Consensus 333 ~~~~~~ni~~~~~g 346 (386)
.+.+++|+.+|++|
T Consensus 294 ~~~~~~nl~~~~~g 307 (307)
T 1wwk_A 294 GVEVAEKVVKILKG 307 (307)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcC
Confidence 99999999999986
No 24
>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A
Probab=100.00 E-value=4.6e-62 Score=483.07 Aligned_cols=324 Identities=21% Similarity=0.210 Sum_probs=271.5
Q ss_pred cEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecC--CccccHHHHHHhhccCCcEEEEc
Q 016620 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQL--TEDWGETLFAALSRAGGKAFSNM 93 (386)
Q Consensus 16 ~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~--~~~~~~~~l~~l~~l~~k~i~~~ 93 (386)
.+||....... .+.+.+++.++++.+..... .+.+++.+.+. ++|++++.. ...+++++++++++| |+|++.
T Consensus 18 ~~vl~~d~~~~-~~~~~l~~~~~~v~~~~~~~--~~~~~~~~~~~-~~d~~i~~~~~~~~~~~~~l~~~~~L--k~I~~~ 91 (364)
T 2j6i_A 18 EKLYGCTENKL-GIANWLKDQGHELITTSDKE--GGNSVLDQHIP-DADIIITTPFHPAYITKERIDKAKKL--KLVVVA 91 (364)
T ss_dssp TTCTTBTTTGG-GCHHHHHHTTCEEEEESCCS--STTSHHHHHGG-GCSEEEECTTSCCCBCHHHHHHCTTC--CEEEES
T ss_pred ceEEEecCccH-HHHHHHHhCCCEEEEcCCCC--CCHHHHHHHhh-CCeEEEecCcCCCCCCHHHHhhCCCC--eEEEEC
Confidence 44555444333 24567777888876543322 24567777776 599998754 346899999999987 999999
Q ss_pred cccccccChhHHhhC--CcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEE
Q 016620 94 AVGYNNVDVNAANKY--GIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVI 171 (386)
Q Consensus 94 ~~G~d~id~~~~~~~--gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIv 171 (386)
|+|+|+||+++++++ ||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ......+.+++|++||||
T Consensus 92 ~~G~d~id~~~~~~~~~gI~V~n~pg~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~W~~-~~~~~~~~~l~g~tvgII 170 (364)
T 2j6i_A 92 GVGSDHIDLDYINQTGKKISVLEVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEV-AAIAKDAYDIEGKTIATI 170 (364)
T ss_dssp SSCCTTBCHHHHHHHTCCCEEEECTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCH-HHHHTTCCCSTTCEEEEE
T ss_pred CcccccccHHHHHhcCCCEEEEECCCcCcHHHHHHHHHHHHHHHhChHHHHHHHHhCCCCc-CcccCCcccCCCCEEEEE
Confidence 999999999999999 99999999999999999999999999999999999999998741 111124679999999999
Q ss_pred ecChhHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhh
Q 016620 172 GAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (386)
Q Consensus 172 G~G~IG~~iA~~L~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t 250 (386)
|+|.||+.+|+++ ++|||+ |++||++....... ...+ .....++++++++||+|++|+|++++|
T Consensus 171 G~G~IG~~vA~~l-~~~G~~~V~~~d~~~~~~~~~---------~~~g-----~~~~~~l~ell~~aDvV~l~~P~t~~t 235 (364)
T 2j6i_A 171 GAGRIGYRVLERL-VPFNPKELLYYDYQALPKDAE---------EKVG-----ARRVENIEELVAQADIVTVNAPLHAGT 235 (364)
T ss_dssp CCSHHHHHHHHHH-GGGCCSEEEEECSSCCCHHHH---------HHTT-----EEECSSHHHHHHTCSEEEECCCCSTTT
T ss_pred CcCHHHHHHHHHH-HhCCCcEEEEECCCccchhHH---------HhcC-----cEecCCHHHHHhcCCEEEECCCCChHH
Confidence 9999999999997 799997 99999876332110 0111 222358999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCC--C---CeEEcCCCCCC
Q 016620 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEM--K---NAIVVPHIASA 324 (386)
Q Consensus 251 ~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~--~---nvilTPHia~~ 324 (386)
+++|+++.|+.||+|++|||+|||+++|+++|+++|++|+|.||+||||++||++. +|||++ | ||++|||+||+
T Consensus 236 ~~li~~~~l~~mk~ga~lIn~arG~~vd~~aL~~aL~~g~i~gA~LDVf~~EP~~~~~pL~~~~~~~~~nvilTPHia~~ 315 (364)
T 2j6i_A 236 KGLINKELLSKFKKGAWLVNTARGAICVAEDVAAALESGQLRGYGGDVWFPQPAPKDHPWRDMRNKYGAGNAMTPHYSGT 315 (364)
T ss_dssp TTCBCHHHHTTSCTTEEEEECSCGGGBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTCHHHHCCCTTSCCEEECCSCGGG
T ss_pred HHHhCHHHHhhCCCCCEEEECCCCchhCHHHHHHHHHcCCCcEEEEecCCCCCCCCCChHHhccCCccCcEEECCccCcC
Confidence 99999999999999999999999999999999999999999999999999999865 699999 9 99999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCC---CCCCCCCCCCcCCC
Q 016620 325 SKWTREGMATLAALNVLGKIKGY---PIWGNPNQVEPFLN 361 (386)
Q Consensus 325 t~~~~~~~~~~~~~ni~~~~~g~---~~~~~v~~~~~~~~ 361 (386)
|.+++.++.+.+++||.+|++|+ ++.|.||.-++|.+
T Consensus 316 t~e~~~~~~~~~~~nl~~~~~g~~~~~~~n~v~~~~~y~~ 355 (364)
T 2j6i_A 316 TLDAQTRYAQGTVNILESFFTGKFDYRPQDIILLNGEYGT 355 (364)
T ss_dssp SHHHHHHHHHHHHHHHHHHHTTCCCCCGGGEEEBTTBC--
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCCCCCCCceecCCcCcch
Confidence 99999999999999999999999 56666666556665
No 25
>3ba1_A HPPR, hydroxyphenylpyruvate reductase; two domain protein, substrate binding domain, cofactor bindi domain, oxidoreductase; 1.47A {Solenostemon scutellarioides} PDB: 3baz_A*
Probab=100.00 E-value=3.4e-60 Score=464.29 Aligned_cols=310 Identities=29% Similarity=0.438 Sum_probs=272.2
Q ss_pred CcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHH-HHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEc
Q 016620 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVED-IIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (386)
Q Consensus 15 ~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e-~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~ 93 (386)
+++|+++.++++ .+.+.|++. +++...... .+.++ +.+.+. ++|++++....++++++++++|+| |+|++.
T Consensus 23 ~~~vl~~~~~~~-~~~~~l~~~-~~~~~~~~~---~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~p~L--k~I~~~ 94 (333)
T 3ba1_A 23 AIGVLMMCPMST-YLEQELDKR-FKLFRYWTQ---PAQRDFLALQAE-SIRAVVGNSNAGADAELIDALPKL--EIVSSF 94 (333)
T ss_dssp CCEEEECSCCCH-HHHHHHHHH-SEEEEGGGC---SSHHHHHHHHTT-TEEEEEECSSSCBCHHHHHHCTTC--CEEEES
T ss_pred CCEEEEeCCCCH-HHHHHHHhc-CCEEEecCC---CChHHHHHHHhC-CCEEEEEcCCCCCCHHHHhhCCCC--cEEEEc
Confidence 468999888765 456777653 455432221 24455 445454 699999877778999999999988 999999
Q ss_pred cccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016620 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (386)
Q Consensus 94 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~ 173 (386)
|+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|. +. ....|.+++|++|||||+
T Consensus 95 ~~G~d~id~~~~~~~gI~v~n~pg~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~-~~-~~~~~~~l~g~~vgIIG~ 172 (333)
T 3ba1_A 95 SVGLDKVDLIKCEEKGVRVTNTPDVLTDDVADLAIGLILAVLRRICECDKYVRRGAWK-FG-DFKLTTKFSGKRVGIIGL 172 (333)
T ss_dssp SSCCTTBCHHHHHHHTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTGGG-GC-CCCCCCCCTTCCEEEECC
T ss_pred CccccccCHHHHHhCCcEEEECCCcchHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCC-cc-ccccccccCCCEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999985 21 223468999999999999
Q ss_pred ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhc
Q 016620 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHL 253 (386)
Q Consensus 174 G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~l 253 (386)
|.||+.+|+++ ++||++|++||++.... . +.....++++++++||+|++|+|++++|+++
T Consensus 173 G~iG~~vA~~l-~~~G~~V~~~dr~~~~~-----------------~--g~~~~~~l~ell~~aDvVil~vP~~~~t~~l 232 (333)
T 3ba1_A 173 GRIGLAVAERA-EAFDCPISYFSRSKKPN-----------------T--NYTYYGSVVELASNSDILVVACPLTPETTHI 232 (333)
T ss_dssp SHHHHHHHHHH-HTTTCCEEEECSSCCTT-----------------C--CSEEESCHHHHHHTCSEEEECSCCCGGGTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCCchhc-----------------c--CceecCCHHHHHhcCCEEEEecCCChHHHHH
Confidence 99999999997 69999999999876431 0 1223468999999999999999999999999
Q ss_pred ccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHHHHH
Q 016620 254 INKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMA 333 (386)
Q Consensus 254 i~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~~ 333 (386)
++++.++.||+|++|||+|||.++|+++|.++|++|++.||++|||++||++.++||++|||++|||+|+.|.++++++.
T Consensus 233 i~~~~l~~mk~gailIn~srG~~vd~~aL~~aL~~g~i~ga~lDv~~~EP~~~~~L~~~~nviltPH~~~~t~e~~~~~~ 312 (333)
T 3ba1_A 233 INREVIDALGPKGVLINIGRGPHVDEPELVSALVEGRLGGAGLDVFEREPEVPEKLFGLENVVLLPHVGSGTVETRKVMA 312 (333)
T ss_dssp BCHHHHHHHCTTCEEEECSCGGGBCHHHHHHHHHHTSSCEEEESCCTTTTCCCGGGGGCTTEEECSSCTTCSHHHHHHHH
T ss_pred hhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHcCCCeEEEEecCCCCCCCcchhhcCCCEEECCcCCCCCHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHHHHHcCCCCCCCCC
Q 016620 334 TLAALNVLGKIKGYPIWGNPN 354 (386)
Q Consensus 334 ~~~~~ni~~~~~g~~~~~~v~ 354 (386)
+.+++|+.+|++|+++.|.||
T Consensus 313 ~~~~~nl~~~~~g~~~~~~Vn 333 (333)
T 3ba1_A 313 DLVVGNLEAHFSGKPLLTPVV 333 (333)
T ss_dssp HHHHHHHHHHHHTCCCSSBCC
T ss_pred HHHHHHHHHHHcCCCCCCCCC
Confidence 999999999999999999886
No 26
>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A
Probab=100.00 E-value=2.9e-59 Score=457.94 Aligned_cols=323 Identities=33% Similarity=0.458 Sum_probs=280.6
Q ss_pred CCCCcEEEEeCCCCchHHHHHHHhC-CCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHh-hccCCcE
Q 016620 12 PNGKYRVVSTKPMPGTRWINLLIEQ-DCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAAL-SRAGGKA 89 (386)
Q Consensus 12 ~~~~~~vlvt~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l-~~l~~k~ 89 (386)
|+++|||+++.++++ .+.+.+++. ++++.... .+...+.+++.+.+. ++|+++++...++++++++++ ++| |+
T Consensus 5 ~~~~~~il~~~~~~~-~~~~~l~~~~~~~v~~~~-~~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~~L--k~ 79 (330)
T 2gcg_A 5 PVRLMKVFVTRRIPA-EGRVALARAADCEVEQWD-SDEPIPAKELERGVA-GAHGLLCLLSDHVDKRILDAAGANL--KV 79 (330)
T ss_dssp --CCEEEEESSCCCH-HHHHHHHHCTTEEEEECC-SSSCCCHHHHHHHHT-TCSEEEECTTSCBCHHHHHHHCTTC--CE
T ss_pred CCCCCEEEEECCCCH-HHHHHHHhcCCceEEEec-CCCCCCHHHHHHHhc-CCeEEEECCCCCCCHHHHHhcCCCc--eE
Confidence 556789999887765 457777765 35554432 222357888888886 599999876678999999999 887 99
Q ss_pred EEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEE
Q 016620 90 FSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVG 169 (386)
Q Consensus 90 i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vg 169 (386)
|++.|+|+|++|+++++++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|..|.+....|.++.|++||
T Consensus 80 I~~~~~G~d~id~~~~~~~gi~v~n~~~~~~~~vAe~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~l~g~~vg 159 (330)
T 2gcg_A 80 ISTMSVGIDHLALDEIKKRGIRVGYTPDVLTDTTAELAVSLLLTTCRRLPEAIEEVKNGGWTSWKPLWLCGYGLTQSTVG 159 (330)
T ss_dssp EEESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCSCCTTSSCBCCCTTCEEE
T ss_pred EEECCcccccccHHHHHhCCceEEeCCCCChHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccCcccccCcCCCCCEEE
Confidence 99999999999999999999999999999999999999999999999999999999999997765444567899999999
Q ss_pred EEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChh
Q 016620 170 VIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT 249 (386)
Q Consensus 170 IvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~ 249 (386)
|||+|.||+.+|+++ +++|++|++||++....... ...+ .. ..++++++++||+|++|+|.+++
T Consensus 160 IIG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~~---------~~~g-----~~-~~~l~e~l~~aDvVi~~vp~~~~ 223 (330)
T 2gcg_A 160 IIGLGRIGQAIARRL-KPFGVQRFLYTGRQPRPEEA---------AEFQ-----AE-FVSTPELAAQSDFIVVACSLTPA 223 (330)
T ss_dssp EECCSHHHHHHHHHH-GGGTCCEEEEESSSCCHHHH---------HTTT-----CE-ECCHHHHHHHCSEEEECCCCCTT
T ss_pred EECcCHHHHHHHHHH-HHCCCEEEEECCCCcchhHH---------HhcC-----ce-eCCHHHHHhhCCEEEEeCCCChH
Confidence 999999999999997 69999999999876431110 0111 11 23899999999999999999999
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCCCCeEEcCCCCCCcHHH
Q 016620 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEMKNAIVVPHIASASKWT 328 (386)
Q Consensus 250 t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~~nvilTPHia~~t~~~ 328 (386)
|+++++++.++.||+|++|||+|||.++|+++|.++|++|++.||++|||++||++. +|||+++||++|||+|+.|.++
T Consensus 224 t~~~i~~~~~~~mk~gailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~epl~~~~~l~~~~nvi~tPh~~~~t~~~ 303 (330)
T 2gcg_A 224 TEGLCNKDFFQKMKETAVFINISRGDVVNQDDLYQALASGKIAAAGLDVTSPEPLPTNHPLLTLKNCVILPHIGSATHRT 303 (330)
T ss_dssp TTTCBSHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCTTCGGGGCTTEEECCSCTTCBHHH
T ss_pred HHHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHcCCccEEEeCCCCCCCCCCCChhhcCCCEEECCCCCCCcHHH
Confidence 999999999999999999999999999999999999999999999999999999754 6999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 329 REGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 329 ~~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
++++...+++|+.+|++|+++.|.||.
T Consensus 304 ~~~~~~~~~~n~~~~~~g~~~~~~v~~ 330 (330)
T 2gcg_A 304 RNTMSLLAANNLLAGLRGEPMPSELKL 330 (330)
T ss_dssp HHHHHHHHHHHHHHHHHTCCCTTEECC
T ss_pred HHHHHHHHHHHHHHHHcCCCCCCCCCC
Confidence 999999999999999999999998874
No 27
>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*
Probab=100.00 E-value=2.2e-58 Score=452.25 Aligned_cols=317 Identities=39% Similarity=0.619 Sum_probs=277.4
Q ss_pred CcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEcc
Q 016620 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (386)
Q Consensus 15 ~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~ 94 (386)
++||+++.++++ .+.+.+++. +++++... ....+.+++.+.+. ++|+++++...++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~-~~~~~l~~~-~~~~~~~~-~~~~~~~~~~~~~~-~~d~~~~~~~~~~~~~~l~~~~~L--k~I~~~~ 75 (334)
T 2dbq_A 2 KPKVFITREIPE-VGIKMLEDE-FEVEVWGD-EKEIPREILLKKVK-EVDALVTMLSERIDKEVFENAPKL--RIVANYA 75 (334)
T ss_dssp CCEEEESSCCCH-HHHHHHHTT-SEEEECCC-SSCCCHHHHHHHTT-SCSEEEECTTSCBCHHHHHTCTTC--CEEEESS
T ss_pred CcEEEEecCCCH-HHHHHHHhc-CCEEEecC-CCCCCHHHHHHHhc-CcEEEEEcCCCCCCHHHHhhCCCc--eEEEECC
Confidence 457888877765 456777654 46654332 22357888888776 599999887778999999999988 9999999
Q ss_pred ccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccC----CCCCCcccccccCCCeEEE
Q 016620 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTVGV 170 (386)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~----~w~~~~~~g~~l~g~~vgI 170 (386)
+|+|+||+++++++||.|+|+||+++.+||||+++++|++.|++..+++.+++|.|. .|.+....|.++.|++|||
T Consensus 76 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~l~g~~vgI 155 (334)
T 2dbq_A 76 VGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGI 155 (334)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHTHHHHHHHHHTSHHHHTTCCCCTTTTCCCCCTTCEEEE
T ss_pred cccccccHHHHHhCCCEEEeCCCcCHHHHHHHHHHHHHHHHhCHHHHHHHHHcCCCcccccccccccccccCCCCCEEEE
Confidence 999999999999999999999999999999999999999999999999999999996 5654334578999999999
Q ss_pred EecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhh
Q 016620 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (386)
Q Consensus 171 vG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t 250 (386)
||+|.||+.+|+++ ++||++|++||++...... . ..+ . ...++++++++||+|++|+|.+++|
T Consensus 156 IG~G~iG~~iA~~l-~~~G~~V~~~d~~~~~~~~---~-------~~g-----~-~~~~l~~~l~~aDvVil~vp~~~~t 218 (334)
T 2dbq_A 156 IGLGRIGQAIAKRA-KGFNMRILYYSRTRKEEVE---R-------ELN-----A-EFKPLEDLLRESDFVVLAVPLTRET 218 (334)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSSCCHHHH---H-------HHC-----C-EECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HhCCCEEEEECCCcchhhH---h-------hcC-----c-ccCCHHHHHhhCCEEEECCCCChHH
Confidence 99999999999997 6999999999998754211 0 111 1 1358999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHH
Q 016620 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTRE 330 (386)
Q Consensus 251 ~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~ 330 (386)
+++++++.++.||+|++|||+|||.++|+++|.++|++|++.||++|||++||...++||++|||++|||+|+.|.++.+
T Consensus 219 ~~~i~~~~~~~mk~~ailIn~srg~~v~~~aL~~aL~~~~i~ga~lDv~~~EP~~~~~L~~~~~vi~tPh~~~~t~~~~~ 298 (334)
T 2dbq_A 219 YHLINEERLKLMKKTAILINIARGKVVDTNALVKALKEGWIAGAGLDVFEEEPYYNEELFKLDNVVLTPHIGSASFGARE 298 (334)
T ss_dssp TTCBCHHHHHHSCTTCEEEECSCGGGBCHHHHHHHHHHTSSSEEEESCCSSSSCCCHHHHHCTTEEECSSCTTCSHHHHH
T ss_pred HHhhCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCeeEEEecCCCCCCCCCchhhcCCCEEECCccCCCcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999445689999999999999999999999
Q ss_pred HHHHHHHHHHHHHHcCCCCCCCCC
Q 016620 331 GMATLAALNVLGKIKGYPIWGNPN 354 (386)
Q Consensus 331 ~~~~~~~~ni~~~~~g~~~~~~v~ 354 (386)
++.+.+++||.+|++|+++.|.||
T Consensus 299 ~~~~~~~~n~~~~~~g~~~~~~v~ 322 (334)
T 2dbq_A 299 GMAELVAKNLIAFKRGEIPPTLVN 322 (334)
T ss_dssp HHHHHHHHHHHHHHTTCCCTTBSC
T ss_pred HHHHHHHHHHHHHHcCCCCccccC
Confidence 999999999999999999999887
No 28
>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}
Probab=100.00 E-value=1.8e-58 Score=452.62 Aligned_cols=313 Identities=31% Similarity=0.462 Sum_probs=275.1
Q ss_pred CcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEcc
Q 016620 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (386)
Q Consensus 15 ~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~ 94 (386)
++||+++.+++++ ..+.+++. +++++.. ..+.+++.+.+. ++|++++....++++++++++|+| |+|++.|
T Consensus 2 ~~~il~~~~~~~~-~~~~l~~~-~~~~~~~----~~~~~~~~~~~~-~~d~~i~~~~~~~~~~~l~~~~~L--k~I~~~~ 72 (333)
T 2d0i_A 2 RPKVGVLLKMKRE-ALEELKKY-ADVEIIL----YPSGEELKGVIG-RFDGIIVSPTTKITREVLENAERL--KVISCHS 72 (333)
T ss_dssp CSEEEECSCCCHH-HHHHHHTT-SEEEECC----SCCHHHHHHHGG-GCSEEEECTTSCBCHHHHTTCTTC--CEEEESS
T ss_pred CcEEEEECCCCHH-HHHHHHhc-CCEEEeC----CCCHHHHHHHhc-CCEEEEECCCCCCCHHHHhhCCCc--eEEEECC
Confidence 4688888877754 46777654 4665532 257888888776 599999776778999999999988 9999999
Q ss_pred ccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccc----cccCCCeEEE
Q 016620 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG----NLLKGQTVGV 170 (386)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g----~~l~g~~vgI 170 (386)
+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..|. ....| .++.|++|||
T Consensus 73 ~G~d~id~~~~~~~gi~v~n~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~-~~~~~~~~~~~l~g~~vgI 151 (333)
T 2d0i_A 73 AGYDNIDLEEATKRGIYVTKVSGLLSEAVAEFTVGLIINLMRKIHYADKFIRRGEWESHA-KIWTGFKRIESLYGKKVGI 151 (333)
T ss_dssp SCCTTBCHHHHHHTTCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCCHH-HHHTTSCCCCCSTTCEEEE
T ss_pred cccccccHHHHHhCCcEEEeCCCcChHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCcCc-ccccCCcccCCCCcCEEEE
Confidence 999999999999999999999999999999999999999999999999999999985432 11245 7899999999
Q ss_pred EecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhh
Q 016620 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTT 250 (386)
Q Consensus 171 vG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t 250 (386)
||+|.||+.+|+++ ++||++|++||++....... ..+ . ...++++++++||+|++|+|.+++|
T Consensus 152 IG~G~iG~~vA~~l-~~~G~~V~~~d~~~~~~~~~----------~~g-----~-~~~~l~e~l~~aDiVil~vp~~~~t 214 (333)
T 2d0i_A 152 LGMGAIGKAIARRL-IPFGVKLYYWSRHRKVNVEK----------ELK-----A-RYMDIDELLEKSDIVILALPLTRDT 214 (333)
T ss_dssp ECCSHHHHHHHHHH-GGGTCEEEEECSSCCHHHHH----------HHT-----E-EECCHHHHHHHCSEEEECCCCCTTT
T ss_pred EccCHHHHHHHHHH-HHCCCEEEEECCCcchhhhh----------hcC-----c-eecCHHHHHhhCCEEEEcCCCChHH
Confidence 99999999999997 79999999999987542110 001 1 1248999999999999999999999
Q ss_pred hhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCC-CeEEcCCCCCCcHHHH
Q 016620 251 YHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK-NAIVVPHIASASKWTR 329 (386)
Q Consensus 251 ~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~-nvilTPHia~~t~~~~ 329 (386)
+++++++.++.||+| +|||+|||.++|+++|.++|++|++.||++|||++||+++++||++| ||++|||+++.|.++.
T Consensus 215 ~~~i~~~~~~~mk~g-ilin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~~nviltPh~~~~t~~~~ 293 (333)
T 2d0i_A 215 YHIINEERVKKLEGK-YLVNIGRGALVDEKAVTEAIKQGKLKGYATDVFEKEPVREHELFKYEWETVLTPHYAGLALEAQ 293 (333)
T ss_dssp TTSBCHHHHHHTBTC-EEEECSCGGGBCHHHHHHHHHTTCBCEEEESCCSSSSCSCCGGGGCTTTEEECCSCTTCCHHHH
T ss_pred HHHhCHHHHhhCCCC-EEEECCCCcccCHHHHHHHHHcCCceEEEecCCCCCCCCCchHHcCCCCEEEcCccCCCcHHHH
Confidence 999999999999999 99999999999999999999999999999999999998877999999 9999999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCCCCCC
Q 016620 330 EGMATLAALNVLGKIKGYPIWGNPNQ 355 (386)
Q Consensus 330 ~~~~~~~~~ni~~~~~g~~~~~~v~~ 355 (386)
+++.+.+++|+.+|++|+++.|.||.
T Consensus 294 ~~~~~~~~~n~~~~~~g~~~~~~v~~ 319 (333)
T 2d0i_A 294 EDVGFRAVENLLKVLRGEVPEDLVNK 319 (333)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTBSCT
T ss_pred HHHHHHHHHHHHHHHcCCCCcCccCH
Confidence 99999999999999999999999974
No 29
>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*
Probab=100.00 E-value=1.1e-58 Score=455.68 Aligned_cols=317 Identities=27% Similarity=0.374 Sum_probs=262.7
Q ss_pred CCCcEEEEeCCC-CchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEE
Q 016620 13 NGKYRVVSTKPM-PGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFS 91 (386)
Q Consensus 13 ~~~~~vlvt~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~ 91 (386)
..++++++.... ...+ .+.++. ..++..+. ..+.+|+.+...+++|+++++...+++++.++++++| |+|+
T Consensus 19 ~~kp~i~~l~~~~~~~~-~~~l~~-~~~~~~~~----~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~L--k~I~ 90 (347)
T 1mx3_A 19 SHMPLVALLDGRDCTVE-MPILKD-VATVAFCD----AQSTQEIHEKVLNEAVGALMYHTITLTREDLEKFKAL--RIIV 90 (347)
T ss_dssp --CCEEEESSCSCCTTT-HHHHTT-TCEEEECC----CSSGGGSCHHHHHHEEEEEECSSSCBCHHHHTTCSSC--CEEE
T ss_pred CCCCEEEEEcCCcchhh-HHHhhc-cceEEecC----CCCHHHHHHHhhcCCeEEEEeCCCCCCHHHHhhCCCC--CEEE
Confidence 456777665421 1223 455544 34554332 1245666555322478888777778999999999988 9999
Q ss_pred EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCC----cc-cccccCCC
Q 016620 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPN----LF-VGNLLKGQ 166 (386)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~----~~-~g~~l~g~ 166 (386)
+.|+|+|+||+++++++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|.. ... .. .+.+++|+
T Consensus 91 ~~~~G~d~id~~~~~~~gI~V~n~~~~~~~~vAE~~~~l~L~~~R~~~~~~~~~~~g~w~~-~~~~~~~~~~~~~~l~g~ 169 (347)
T 1mx3_A 91 RIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHILNLYRRATWLHQALREGTRVQ-SVEQIREVASGAARIRGE 169 (347)
T ss_dssp ESSSCCTTBCHHHHHHTTCEEECCCSTTHHHHHHHHHHHHHHHHHCHHHHHHHHHTTCCCC-SHHHHHHHTTTCCCCTTC
T ss_pred EcccccCcccHHHHHhCCceEEECCCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHcCCccc-ccccccccccCccCCCCC
Confidence 9999999999999999999999999999999999999999999999999999999999842 110 01 12689999
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPl 246 (386)
+|||||+|.||+.+|+++ ++|||+|++||++....... ..+ .....+++|++++||+|++|+|+
T Consensus 170 tvGIIG~G~IG~~vA~~l-~~~G~~V~~~d~~~~~~~~~----------~~g-----~~~~~~l~ell~~aDvV~l~~P~ 233 (347)
T 1mx3_A 170 TLGIIGLGRVGQAVALRA-KAFGFNVLFYDPYLSDGVER----------ALG-----LQRVSTLQDLLFHSDCVTLHCGL 233 (347)
T ss_dssp EEEEECCSHHHHHHHHHH-HTTTCEEEEECTTSCTTHHH----------HHT-----CEECSSHHHHHHHCSEEEECCCC
T ss_pred EEEEEeECHHHHHHHHHH-HHCCCEEEEECCCcchhhHh----------hcC-----CeecCCHHHHHhcCCEEEEcCCC
Confidence 999999999999999997 79999999999876432111 011 12235899999999999999999
Q ss_pred ChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC--CCCCCCCCCeEEcCCCCCC
Q 016620 247 DKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM--KPGLSEMKNAIVVPHIASA 324 (386)
Q Consensus 247 t~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~--~~~L~~~~nvilTPHia~~ 324 (386)
+++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|++.||++|||+.||++ .++||.+||+++|||++++
T Consensus 234 t~~t~~li~~~~l~~mk~gailIN~arg~~vd~~aL~~aL~~g~i~gA~lDV~~~EP~~~~~~~L~~~~nvi~tPHia~~ 313 (347)
T 1mx3_A 234 NEHNHHLINDFTVKQMRQGAFLVNTARGGLVDEKALAQALKEGRIRGAALDVHESEPFSFSQGPLKDAPNLICTPHAAWY 313 (347)
T ss_dssp CTTCTTSBSHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHHTSEEEEEESCCSSSSCCTTSSTTTTCSSEEECSSCTTC
T ss_pred CHHHHHHhHHHHHhcCCCCCEEEECCCChHHhHHHHHHHHHhCCCcEEEEeecccCCCCCCCchHHhCCCEEEEchHHHH
Confidence 99999999999999999999999999999999999999999999999999999999986 3689999999999999999
Q ss_pred cHHHHHHHHHHHHHHHHHHHcCCCCCCCCC
Q 016620 325 SKWTREGMATLAALNVLGKIKGYPIWGNPN 354 (386)
Q Consensus 325 t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~ 354 (386)
|.++++++.+.+++||.+|++|+++.+..|
T Consensus 314 t~~~~~~~~~~~~~ni~~~~~g~~~~~l~~ 343 (347)
T 1mx3_A 314 SEQASIEMREEAAREIRRAITGRIPDSLKN 343 (347)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHSCTTTTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCCcccCC
Confidence 999999999999999999999987663333
No 30
>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B
Probab=100.00 E-value=2e-58 Score=454.84 Aligned_cols=324 Identities=26% Similarity=0.348 Sum_probs=272.2
Q ss_pred CcEEEEeCC-CC-chHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhc----CCCcEEEec------CCccccHHHHHHh
Q 016620 15 KYRVVSTKP-MP-GTRWINLLIEQDCRVEICTQKKTILSVEDIIALIG----DKCDGVIGQ------LTEDWGETLFAAL 82 (386)
Q Consensus 15 ~~~vlvt~~-~~-~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~----~~ad~vi~~------~~~~~~~~~l~~l 82 (386)
++|||++.+ ++ .....+.|++. +++... . ..+.+++.+.+. +++|+++.. ...++++++++++
T Consensus 3 ~~~vl~~~~~~~~~~~~~~~l~~~-~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~ 77 (348)
T 2w2k_A 3 RPRVLLLGDPARHLDDLWSDFQQK-FEVIPA--N--LTTHDGFKQALREKRYGDFEAIIKLAVENGTESYPWNADLISHL 77 (348)
T ss_dssp CCEEEECSSCCSSCHHHHHHHHHH-SEEEEC--C--CCCHHHHHHHHHTTTTCCCSEEEECSTTTTGGGCCBCHHHHTTS
T ss_pred CcEEEEECCccccChHHHHHHHhc-ceEEec--C--CCCHHHHHHHhhhcccCCeEEEEEcccccccccCCCCHHHHHhc
Confidence 568888776 43 22334566543 455432 2 247888888876 258988764 2458999999999
Q ss_pred h-ccCCcEEEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCc---cCC-CCCCc
Q 016620 83 S-RAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL---YDG-WLPNL 157 (386)
Q Consensus 83 ~-~l~~k~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~---~~~-w~~~~ 157 (386)
| +| |+|++.|+|+|+||+++|+++||.|+|+||+++.+||||++++||++.|++..+++.+++|. |.. +....
T Consensus 78 ~~~L--k~I~~~~~G~d~id~~~~~~~gI~v~n~p~~~~~~vAe~~~~l~L~~~R~~~~~~~~~~~g~~~~w~~~~~~~~ 155 (348)
T 2w2k_A 78 PSSL--KVFAAAGAGFDWLDLDALNERGVAFANSRGAGDTATSDLALYLILSVFRLASYSERAARTGDPETFNRVHLEIG 155 (348)
T ss_dssp CTTC--CEEEESSSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHTHHHHHHHHTTCCHHHHHHHHHHHH
T ss_pred ccCc--eEEEECCccccccCHHHHHhCCcEEEECCCCCcHHHHHHHHHHHHHHHhChHHHHHHHHcCCCccccccccccc
Confidence 8 47 99999999999999999999999999999999999999999999999999999999999998 731 10011
Q ss_pred ccccccCCCeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh
Q 016620 158 FVGNLLKGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (386)
Q Consensus 158 ~~g~~l~g~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (386)
..|.+++|++|||||+|.||+.+|+++ + +||++|++||++....... ...+ .....++++++++
T Consensus 156 ~~~~~l~g~~vgIIG~G~IG~~vA~~l-~~~~G~~V~~~d~~~~~~~~~---------~~~g-----~~~~~~l~ell~~ 220 (348)
T 2w2k_A 156 KSAHNPRGHVLGAVGLGAIQKEIARKA-VHGLGMKLVYYDVAPADAETE---------KALG-----AERVDSLEELARR 220 (348)
T ss_dssp TTCCCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEECSSCCCHHHH---------HHHT-----CEECSSHHHHHHH
T ss_pred ccCcCCCCCEEEEEEECHHHHHHHHHH-HHhcCCEEEEECCCCcchhhH---------hhcC-----cEEeCCHHHHhcc
Confidence 246789999999999999999999997 7 9999999999986432110 0001 1123489999999
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeE
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAI 316 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvi 316 (386)
||+|++|+|++++|+++++++.++.||+|++|||+|||+++|+++|.++|++|++.||++|||++||.++++|+++|||+
T Consensus 221 aDvVil~vp~~~~t~~li~~~~l~~mk~gailin~srg~~vd~~aL~~aL~~~~i~gaglDv~~~EP~~~~~L~~~~nvi 300 (348)
T 2w2k_A 221 SDCVSVSVPYMKLTHHLIDEAFFAAMKPGSRIVNTARGPVISQDALIAALKSGKLLSAGLDVHEFEPQVSKELIEMKHVT 300 (348)
T ss_dssp CSEEEECCCCSGGGTTCBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTSEEEEEESSCTTTTSCCHHHHTSSSEE
T ss_pred CCEEEEeCCCChHHHHHhhHHHHhcCCCCCEEEECCCCchhCHHHHHHHHHhCCceEEEeccCCCCCCCCchhhcCCCEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999995556899999999
Q ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcCCCC
Q 016620 317 VVPHIASASKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLNE 362 (386)
Q Consensus 317 lTPHia~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~~~~~~~ 362 (386)
+|||+++.|.+++.++.+.+++||.+|++|+++.|.||. |.+.+
T Consensus 301 ltPH~~~~t~e~~~~~~~~~~~ni~~~~~g~~~~~~v~~--~~~~~ 344 (348)
T 2w2k_A 301 LTTHIGGVAIETFHEFERLTMTNIDRFLLQGKPLLTPAG--KVFAP 344 (348)
T ss_dssp ECCSCTTCSHHHHHHHHHHHHHHHHHHHHTCCCCSSBCS--CCCCC
T ss_pred EcCcCCCCCHHHHHHHHHHHHHHHHHHHcCCCCcceecc--cccCc
Confidence 999999999999999999999999999999999999985 54444
No 31
>1ygy_A PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, serine biosy structural genomics, PSI, protein structure initiative; HET: TAR; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.4 c.23.12.1 d.58.18.1 d.81.2.2 PDB: 3dc2_A* 3ddn_A*
Probab=100.00 E-value=2e-57 Score=470.46 Aligned_cols=333 Identities=29% Similarity=0.375 Sum_probs=291.7
Q ss_pred CcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEcc
Q 016620 15 KYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMA 94 (386)
Q Consensus 15 ~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~ 94 (386)
+|||+++.++++. ..+.|++. +++++.. ..+.+++.+.+. ++|+++++..+++++++++++++| |+|++.|
T Consensus 4 ~~~vl~~~~~~~~-~~~~l~~~-~~v~~~~----~~~~~~~~~~~~-~~d~li~~~~~~~~~~~l~~~~~L--k~i~~~~ 74 (529)
T 1ygy_A 4 LPVVLIADKLAPS-TVAALGDQ-VEVRWVD----GPDRDKLLAAVP-EADALLVRSATTVDAEVLAAAPKL--KIVARAG 74 (529)
T ss_dssp CCEEEECSSCCGG-GGTTSCSS-SEEEECC----TTSHHHHHHHGG-GCSEEEECSSSCBCHHHHHTCTTC--CEEEESS
T ss_pred CcEEEEeCCCCHH-HHHHHhcC-ceEEEcC----CCCHHHHHHHhc-CCEEEEEcCCCCCCHHHHhhCCCC--cEEEECC
Confidence 4678887777653 35556554 5665432 247888888887 599999987778999999999988 9999999
Q ss_pred ccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC
Q 016620 95 VGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG 174 (386)
Q Consensus 95 ~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G 174 (386)
+|+|++|+++|+++||.|+|+|++++.+||||++++||++.|+++.+++.+++|.|.. ..+.|.+++|++|||||+|
T Consensus 75 ~G~d~id~~~~~~~gi~v~n~p~~~~~~vAE~~~~~~l~~~R~~~~~~~~~~~g~w~~---~~~~~~~l~g~~vgIIG~G 151 (529)
T 1ygy_A 75 VGLDNVDVDAATARGVLVVNAPTSNIHSAAEHALALLLAASRQIPAADASLREHTWKR---SSFSGTEIFGKTVGVVGLG 151 (529)
T ss_dssp SCCTTBCHHHHHHTTCEEECCTTSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCG---GGCCBCCCTTCEEEEECCS
T ss_pred cCcCccCHhHHHhCCeEEEECCCcchHHHHHHHHHHHHHHHhhhHHHHHHHHhCCCcc---cCcCccccCCCEEEEEeeC
Confidence 9999999999999999999999999999999999999999999999999999998752 2345789999999999999
Q ss_pred hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcc
Q 016620 175 RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLI 254 (386)
Q Consensus 175 ~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li 254 (386)
.||+++|++| ++||++|++||++...... ...+ .. ..++++++++||+|++|+|.+++|.+++
T Consensus 152 ~IG~~vA~~l-~~~G~~V~~~d~~~~~~~a----------~~~g-----~~-~~~l~e~~~~aDvV~l~~P~~~~t~~~i 214 (529)
T 1ygy_A 152 RIGQLVAQRI-AAFGAYVVAYDPYVSPARA----------AQLG-----IE-LLSLDDLLARADFISVHLPKTPETAGLI 214 (529)
T ss_dssp HHHHHHHHHH-HTTTCEEEEECTTSCHHHH----------HHHT-----CE-ECCHHHHHHHCSEEEECCCCSTTTTTCB
T ss_pred HHHHHHHHHH-HhCCCEEEEECCCCChhHH----------HhcC-----cE-EcCHHHHHhcCCEEEECCCCchHHHHHh
Confidence 9999999997 7999999999997643111 0111 11 2489999999999999999999999999
Q ss_pred cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHHHHHH
Q 016620 255 NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREGMAT 334 (386)
Q Consensus 255 ~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~~~~ 334 (386)
+++.++.||+|+++||+|||.++|+++|.++|++|++.||++|||+.||..++|||+++|+++|||+++.|.++.+++..
T Consensus 215 ~~~~~~~~k~g~ilin~arg~iv~~~aL~~al~~g~i~ga~lDv~~~eP~~~~~L~~~~~vilTPh~~~~t~ea~~~~~~ 294 (529)
T 1ygy_A 215 DKEALAKTKPGVIIVNAARGGLVDEAALADAITGGHVRAAGLDVFATEPCTDSPLFELAQVVVTPHLGASTAEAQDRAGT 294 (529)
T ss_dssp CHHHHTTSCTTEEEEECSCTTSBCHHHHHHHHHTSSEEEEEESSCSSSSCSCCGGGGCTTEEECSSCSSCBHHHHHHHHH
T ss_pred CHHHHhCCCCCCEEEECCCCchhhHHHHHHHHHcCCccEEEEeeccCCCCCCchHHhCCCEEEccccCCCCHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999998888999999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCCCCCCCCcCCCCCCCCCCCCchhhhhhhhCC
Q 016620 335 LAALNVLGKIKGYPIWGNPNQVEPFLNENAQPPAASPSIVNSKALGL 381 (386)
Q Consensus 335 ~~~~ni~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (386)
.+++|+.+|+.|+++.|.||. +. ++ ....+.||+.|++++|.
T Consensus 295 ~~~~~l~~~l~~~~~~~~v~~--~~--~~-~hd~i~P~l~La~~lg~ 336 (529)
T 1ygy_A 295 DVAESVRLALAGEFVPDAVNV--GG--GV-VNEEVAPWLDLVRKLGV 336 (529)
T ss_dssp HHHHHHHHHHTTCCCTTBCSC--CS--TT-SCTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCCCcccCC--cc--cc-cchhhhhHHHHHHHHHH
Confidence 999999999999999999976 43 54 67888999999998873
No 32
>1qp8_A Formate dehydrogenase; oxidoreductase; HET: NDP; 2.80A {Pyrobaculum aerophilum} SCOP: c.2.1.4 c.23.12.1
Probab=100.00 E-value=4.7e-58 Score=443.93 Aligned_cols=297 Identities=22% Similarity=0.311 Sum_probs=258.2
Q ss_pred cEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEccc
Q 016620 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (386)
Q Consensus 16 ~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~ 95 (386)
|||+++.++++ .+.+.|++.++++ . . + .+ .++|+++++. .+.+.++++|+| |+|++.|+
T Consensus 1 m~il~~~~~~~-~~~~~l~~~~~~v--~-~-------~----~~-~~~d~~i~~~---~~~~~l~~~~~L--k~I~~~~~ 59 (303)
T 1qp8_A 1 MELYVNFELPP-EAEEELRKYFKIV--R-G-------G----DL-GNVEAALVSR---ITAEELAKMPRL--KFIQVVTA 59 (303)
T ss_dssp CEEECCSCCCH-HHHHHHHTTCEEE--C-S-------S----CC-TTBCCCCBSC---CCHHHHHHCTTC--CCEEBSSS
T ss_pred CEEEEccCCCH-HHHHHHHhcCCcc--c-h-------h----hh-CCCEEEEECC---CCHHHHhhCCCC--cEEEECCc
Confidence 47888777765 4578787764433 1 1 1 12 2588888764 346889999988 99999999
Q ss_pred cccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh
Q 016620 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (386)
Q Consensus 96 G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~ 175 (386)
|+|+||++++ ++||.|+|+||+++.+||||++++||++.|++..+++.+++|.|..+. .+.++.|++|||||+|.
T Consensus 60 G~d~id~~~~-~~gi~v~~~~~~~~~~vAE~~~~~~L~~~R~~~~~~~~~~~g~w~~~~----~~~~l~g~~vgIIG~G~ 134 (303)
T 1qp8_A 60 GLDHLPWESI-PPHVTVAGNAGSNADAVAEFALALLLAPYKRIIQYGEKMKRGDYGRDV----EIPLIQGEKVAVLGLGE 134 (303)
T ss_dssp CCTTSCCTTS-CTTSCEECCCSSSHHHHHHHHHHHHHHHHTTHHHHHHHHHTTCCCCCS----CCCCCTTCEEEEESCST
T ss_pred CcccccHHHH-hcCCEEEECCCCCchHHHHHHHHHHHHHHhCHHHHHHHHHcCCCCCCC----CCCCCCCCEEEEEccCH
Confidence 9999999884 799999999999999999999999999999999999999999985321 23589999999999999
Q ss_pred hHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhccc
Q 016620 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLIN 255 (386)
Q Consensus 176 IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~ 255 (386)
||+++|+++ ++|||+|++|||+... . ......++++++++||+|++|+|++++|+++|+
T Consensus 135 IG~~~A~~l-~~~G~~V~~~dr~~~~----------------~----~~~~~~~l~ell~~aDvV~l~~P~~~~t~~~i~ 193 (303)
T 1qp8_A 135 IGTRVGKIL-AALGAQVRGFSRTPKE----------------G----PWRFTNSLEEALREARAAVCALPLNKHTRGLVK 193 (303)
T ss_dssp HHHHHHHHH-HHTTCEEEEECSSCCC----------------S----SSCCBSCSHHHHTTCSEEEECCCCSTTTTTCBC
T ss_pred HHHHHHHHH-HHCCCEEEEECCCccc----------------c----CcccCCCHHHHHhhCCEEEEeCcCchHHHHHhC
Confidence 999999997 7999999999987531 0 112346899999999999999999999999999
Q ss_pred HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeecc-CCCCCC-CCCCCCCCCeEEcCCCCCC--cHHHHHH
Q 016620 256 KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF-EDEPYM-KPGLSEMKNAIVVPHIASA--SKWTREG 331 (386)
Q Consensus 256 ~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~-~~EP~~-~~~L~~~~nvilTPHia~~--t~~~~~~ 331 (386)
++.|+.||+|++|||+|||+++|+++|.++|++|++.||++||| ++||++ ++|||++||+++|||++|+ |.+++++
T Consensus 194 ~~~l~~mk~gailin~srg~~vd~~aL~~aL~~g~i~gA~lDv~~~~ep~~~~~~L~~~~nviltPH~~~~~~t~e~~~~ 273 (303)
T 1qp8_A 194 YQHLALMAEDAVFVNVGRAEVLDRDGVLRILKERPQFIFASDVWWGRNDFAKDAEFFSLPNVVATPWVAGGYGNERVWRQ 273 (303)
T ss_dssp HHHHTTSCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTTTTCCGGGHHHHTSTTEEECCSCSSSSSCHHHHHH
T ss_pred HHHHhhCCCCCEEEECCCCcccCHHHHHHHHHhCCceEEEeccCCCCCCCCCCChhhcCCCEEECCCcCCCCCCHHHHHH
Confidence 99999999999999999999999999999999999999999999 889987 4699999999999999998 9999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCCCCCCcCC
Q 016620 332 MATLAALNVLGKIKGYPIWGNPNQVEPFL 360 (386)
Q Consensus 332 ~~~~~~~ni~~~~~g~~~~~~v~~~~~~~ 360 (386)
+.+.+++||.+|++|+++.|.||. +.|+
T Consensus 274 ~~~~~~~nl~~~~~g~~~~~~v~~-~~y~ 301 (303)
T 1qp8_A 274 MVMEAVRNLITYATGGRPRNIAKR-EDYI 301 (303)
T ss_dssp HHHHHHHHHHHHHTTSCCSCBCCG-GGTC
T ss_pred HHHHHHHHHHHHHcCCCCCceeCH-HHcC
Confidence 999999999999999999999975 3454
No 33
>3oet_A Erythronate-4-phosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.36A {Salmonella enterica subsp}
Probab=100.00 E-value=7.7e-58 Score=452.25 Aligned_cols=283 Identities=26% Similarity=0.352 Sum_probs=245.1
Q ss_pred CCcEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEc
Q 016620 14 GKYRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNM 93 (386)
Q Consensus 14 ~~~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~ 93 (386)
+||||+++...+. ..+.+++.+ ++.+.. +..++.+++ . ++|+++++..+++++++++ .+++ |+|++.
T Consensus 2 ~mmkIl~~~~~p~--~~~~~~~~~-~v~~~~--~~~~~~~~l----~-~ad~li~~~~~~v~~~ll~-~~~L--k~I~~~ 68 (381)
T 3oet_A 2 NAMKILVDENMPY--ARELFSRLG-EVKAVP--GRPIPVEEL----N-HADALMVRSVTKVNESLLS-GTPI--NFVGTA 68 (381)
T ss_dssp CCCEEEEETTSTT--HHHHHTTSS-EEEEEC--C---CHHHH----T-TCSEEEECTTSCBSHHHHT-TSCC--CEEEES
T ss_pred CceEEEECCCCcH--HHHHHhhCC-cEEEeC--CCCCCHHHH----C-CCEEEEECCCCCCCHHHHc-CCCC--EEEEEc
Confidence 5689999988865 246666655 665543 223455553 3 6999999887889999998 4555 999999
Q ss_pred cccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEec
Q 016620 94 AVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGA 173 (386)
Q Consensus 94 ~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~ 173 (386)
|+|+|+||+++++++||.|+|+||+++.+||||+++++|++.|+. |.+++|+||||||+
T Consensus 69 ~~G~D~iD~~~~~~~gI~v~n~pg~~~~~VAE~~l~~lL~l~r~~---------------------g~~l~gktvGIIGl 127 (381)
T 3oet_A 69 TAGTDHVDEAWLKQAGIGFSAAPGCNAIAVVEYVFSALLMLAERD---------------------GFSLRDRTIGIVGV 127 (381)
T ss_dssp SSCCTTBCHHHHHHTTCEEECCTTTTHHHHHHHHHHHHHHHHHHT---------------------TCCGGGCEEEEECC
T ss_pred cccccccCHHHHHhCCEEEEECCCcCcchhHHHHHHHHHHHHHhc---------------------CCccCCCEEEEEeE
Confidence 999999999999999999999999999999999999999999852 25799999999999
Q ss_pred ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChh----
Q 016620 174 GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT---- 249 (386)
Q Consensus 174 G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~---- 249 (386)
|.||+++|+++ ++|||+|++||++.... . ......+++|++++||+|++|+|+|++
T Consensus 128 G~IG~~vA~~l-~a~G~~V~~~d~~~~~~---------------~----~~~~~~sl~ell~~aDiV~l~~Plt~~g~~~ 187 (381)
T 3oet_A 128 GNVGSRLQTRL-EALGIRTLLCDPPRAAR---------------G----DEGDFRTLDELVQEADVLTFHTPLYKDGPYK 187 (381)
T ss_dssp SHHHHHHHHHH-HHTTCEEEEECHHHHHT---------------T----CCSCBCCHHHHHHHCSEEEECCCCCCSSTTC
T ss_pred CHHHHHHHHHH-HHCCCEEEEECCChHHh---------------c----cCcccCCHHHHHhhCCEEEEcCcCCcccccc
Confidence 99999999997 79999999999854320 0 012357999999999999999999999
Q ss_pred hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHH
Q 016620 250 TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTR 329 (386)
Q Consensus 250 t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~ 329 (386)
|+++|+++.|++||+|++|||+|||++||++||+++|++|++.||+||||++||+++++||.++ +++|||+||+|.+++
T Consensus 188 T~~li~~~~l~~mk~gailIN~aRG~vvde~aL~~aL~~g~i~gA~LDV~e~EP~~~~~L~~~~-~i~TPHiag~t~e~~ 266 (381)
T 3oet_A 188 TLHLADETLIRRLKPGAILINACRGPVVDNAALLARLNAGQPLSVVLDVWEGEPDLNVALLEAV-DIGTSHIAGYTLEGK 266 (381)
T ss_dssp CTTSBCHHHHHHSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHHHS-SEECSSCTTCCHHHH
T ss_pred chhhcCHHHHhcCCCCcEEEECCCCcccCHHHHHHHHHhCCCeEEEeeccccCCCCcchhhhCC-EEECCccCcCcHHHH
Confidence 9999999999999999999999999999999999999999999999999999999887899874 899999999999999
Q ss_pred HHHHHHHHHHHHHHHcCCCCCC
Q 016620 330 EGMATLAALNVLGKIKGYPIWG 351 (386)
Q Consensus 330 ~~~~~~~~~ni~~~~~g~~~~~ 351 (386)
.++...+++|+.+|+.|.+-..
T Consensus 267 ~~~~~~~~~~l~~~l~~~~~~~ 288 (381)
T 3oet_A 267 ARGTTQVFEAYSAFIGREQRVA 288 (381)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCcccc
Confidence 9999999999999998865433
No 34
>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}
Probab=100.00 E-value=9.3e-56 Score=424.56 Aligned_cols=250 Identities=26% Similarity=0.365 Sum_probs=223.6
Q ss_pred CCcEEEecCCccccHHHHHHhhccCCcEEEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHH
Q 016620 62 KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEA 141 (386)
Q Consensus 62 ~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~ 141 (386)
++|++++. ...+ ++|+| |+|++.|+|+|+||++++++++|.++| ++.++.+||||++++||++.|++..+
T Consensus 34 ~ad~li~~-~~~~------~~~~L--k~I~~~~~G~d~id~~~~~~~~~~~~~-~~~~~~~vAE~~~~~~L~~~R~~~~~ 103 (290)
T 3gvx_A 34 DAEAQVIK-DRYV------LGKRT--KMIQAISAGVDHIDVNGIPENVVLCSN-AGAYSISVAEHAFALLLAHAKNILEN 103 (290)
T ss_dssp CCSEEEES-SCCC------CCSSC--CEEEECSSCCTTSCGGGSCTTSEEECC-HHHHHHHHHHHHHHHHHHHHTTHHHH
T ss_pred hhhhhhhh-hhhh------hhhhh--HHHHHHhcCCceeecCCCccceEEeec-CCcceeeHHHHHHHHHHHHHHhhhhh
Confidence 59999984 3332 67877 999999999999999999988776666 47889999999999999999999999
Q ss_pred HHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC
Q 016620 142 DEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP 221 (386)
Q Consensus 142 ~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (386)
++.+++|.|... + .++++|+||||||+|.||+++|++| ++|||+|++|||+..... .
T Consensus 104 ~~~~~~g~w~~~-~----~~~l~g~tvGIIGlG~IG~~vA~~l-~~~G~~V~~~dr~~~~~~-----------------~ 160 (290)
T 3gvx_A 104 NELMKAGIFRQS-P----TTLLYGKALGILGYGGIGRRVAHLA-KAFGMRVIAYTRSSVDQN-----------------V 160 (290)
T ss_dssp HHHHHTTCCCCC-C----CCCCTTCEEEEECCSHHHHHHHHHH-HHHTCEEEEECSSCCCTT-----------------C
T ss_pred hhHhhhcccccC-C----ceeeecchheeeccCchhHHHHHHH-HhhCcEEEEEeccccccc-----------------c
Confidence 999999998532 1 2689999999999999999999997 799999999999764310 0
Q ss_pred ccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCC
Q 016620 222 VTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (386)
Q Consensus 222 ~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~ 301 (386)
.....++++++++||+|++|+|+|++|+++|+++.|+.||+|++|||+|||+++|+++|+++|++|++.+|++|||++
T Consensus 161 --~~~~~~l~ell~~aDiV~l~~P~t~~t~~li~~~~l~~mk~gailIN~aRG~~vd~~aL~~aL~~g~i~ga~lDV~~~ 238 (290)
T 3gvx_A 161 --DVISESPADLFRQSDFVLIAIPLTDKTRGMVNSRLLANARKNLTIVNVARADVVSKPDMIGFLKERSDVWYLSDVWWN 238 (290)
T ss_dssp --SEECSSHHHHHHHCSEEEECCCCCTTTTTCBSHHHHTTCCTTCEEEECSCGGGBCHHHHHHHHHHCTTCEEEESCCTT
T ss_pred --ccccCChHHHhhccCeEEEEeeccccchhhhhHHHHhhhhcCceEEEeehhcccCCcchhhhhhhccceEEeeccccC
Confidence 123469999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCCeEEcCCCC-CCcHHHHHHHHHHHHHHHHHHHcCCC
Q 016620 302 EPYMKPGLSEMKNAIVVPHIA-SASKWTREGMATLAALNVLGKIKGYP 348 (386)
Q Consensus 302 EP~~~~~L~~~~nvilTPHia-~~t~~~~~~~~~~~~~ni~~~~~g~~ 348 (386)
||+ +|||++|||++|||+| ++|.++++++.+.+++||.+|++|+.
T Consensus 239 EP~--~pL~~~~nvilTPHiag~~t~e~~~~~~~~~~~ni~~~~~~~~ 284 (290)
T 3gvx_A 239 EPE--ITETNLRNAILSPHVAGGMSGEIMDIAIQLAFENVRNFFEGEG 284 (290)
T ss_dssp TTS--CCSCCCSSEEECCSCSSCBTTBCCHHHHHHHHHHHHHHTC---
T ss_pred Ccc--cchhhhhhhhcCccccCCccchHHHHHHHHHHHHHHhhhcCCC
Confidence 998 8999999999999999 89999999999999999999999974
No 35
>2o4c_A Erythronate-4-phosphate dehydrogenase; erythronate-4-phsphate, NAD, tartrate, phosph oxidoreductase; HET: NAD TLA; 2.30A {Pseudomonas aeruginosa}
Probab=100.00 E-value=5.3e-55 Score=432.86 Aligned_cols=283 Identities=25% Similarity=0.337 Sum_probs=245.1
Q ss_pred cEEEEeCCCCchHHHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEccc
Q 016620 16 YRVVSTKPMPGTRWINLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (386)
Q Consensus 16 ~~vlvt~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~ 95 (386)
|||+++..++. ..+.+++.+ ++.+.... ..+.+++ .++|+++++..+++++++++ ++++ |+|++.|+
T Consensus 1 mkil~~~~~~~--~~~~~~~~~-~v~~~~~~--~~~~~~l-----~~ad~li~~~~~~~~~~~l~-~~~L--k~I~~~~~ 67 (380)
T 2o4c_A 1 MRILADENIPV--VDAFFADQG-SIRRLPGR--AIDRAAL-----AEVDVLLVRSVTEVSRAALA-GSPV--RFVGTCTI 67 (380)
T ss_dssp CEEEEETTCTT--HHHHHGGGS-EEEEECGG--GCSTTTT-----TTCSEEEECTTSCBCHHHHT-TSCC--CEEEECSS
T ss_pred CEEEEecCchH--HHHHHHhCC-cEEEecCC--cCChHHH-----CCcEEEEEcCCCCCCHHHhc-CCCc--eEEEEcCc
Confidence 57888877764 246666554 55543322 2234443 36999999877789999998 8877 99999999
Q ss_pred cccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh
Q 016620 96 GYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR 175 (386)
Q Consensus 96 G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~ 175 (386)
|+|+||+++++++||.|+|+||+++.+||||+++++|++.|++ |.+++|+||||||+|.
T Consensus 68 G~D~iD~~~~~~~gI~v~n~pg~~~~~vAE~~l~~lL~l~r~~---------------------~~~l~g~tvGIIGlG~ 126 (380)
T 2o4c_A 68 GTDHLDLDYFAEAGIAWSSAPGCNARGVVDYVLGCLLAMAEVR---------------------GADLAERTYGVVGAGQ 126 (380)
T ss_dssp CSTTBCHHHHHHHTCEEECCTTTTHHHHHHHHHHHHHHHHHHH---------------------TCCGGGCEEEEECCSH
T ss_pred ccchhhHHHHHhCCCEEEeCCCcChHHHHHHHHHHHHHHHhhh---------------------hcccCCCEEEEEeCCH
Confidence 9999999999999999999999999999999999999999952 2479999999999999
Q ss_pred hHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChh----hh
Q 016620 176 IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT----TY 251 (386)
Q Consensus 176 IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~----t~ 251 (386)
||+++|++| ++|||+|++||++.... ..+ . ...++++++++||+|++|+|++++ |+
T Consensus 127 IG~~vA~~l-~~~G~~V~~~d~~~~~~-------------~~g-----~-~~~~l~ell~~aDvV~l~~Plt~~g~~~T~ 186 (380)
T 2o4c_A 127 VGGRLVEVL-RGLGWKVLVCDPPRQAR-------------EPD-----G-EFVSLERLLAEADVISLHTPLNRDGEHPTR 186 (380)
T ss_dssp HHHHHHHHH-HHTTCEEEEECHHHHHH-------------STT-----S-CCCCHHHHHHHCSEEEECCCCCSSSSSCCT
T ss_pred HHHHHHHHH-HHCCCEEEEEcCChhhh-------------ccC-----c-ccCCHHHHHHhCCEEEEeccCccccccchh
Confidence 999999997 79999999999765321 001 1 246899999999999999999999 99
Q ss_pred hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCCcHHHHHH
Q 016620 252 HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASASKWTREG 331 (386)
Q Consensus 252 ~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~t~~~~~~ 331 (386)
++|+++.|+.||+|++|||+|||+++|+++|+++|++|++.+|+||||++||.++++|+. +||++|||+||+|.++..+
T Consensus 187 ~li~~~~l~~mk~gailIN~sRG~vvd~~aL~~aL~~g~i~~A~LDV~~~EP~~~~~l~~-~nvi~TPHiag~t~e~~~~ 265 (380)
T 2o4c_A 187 HLLDEPRLAALRPGTWLVNASRGAVVDNQALRRLLEGGADLEVALDVWEGEPQADPELAA-RCLIATPHIAGYSLEGKLR 265 (380)
T ss_dssp TSBCHHHHHTSCTTEEEEECSCGGGBCHHHHHHHHHTTCCEEEEESCCTTTTSCCHHHHT-TCSEECSSCTTCCHHHHHH
T ss_pred hhcCHHHHhhCCCCcEEEECCCCcccCHHHHHHHHHhCCCceEEeeeeccCCCCchhhcc-CCEEEccccCcCCHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988878887 5999999999999999999
Q ss_pred HHHHHHHHHHHHHcCCCCCCCC
Q 016620 332 MATLAALNVLGKIKGYPIWGNP 353 (386)
Q Consensus 332 ~~~~~~~ni~~~~~g~~~~~~v 353 (386)
+.+.+++|+.+|++|++..+--
T Consensus 266 ~~~~~~~nl~~~l~g~~~~~~~ 287 (380)
T 2o4c_A 266 GTAQIYQAYCAWRGIAERVSLQ 287 (380)
T ss_dssp HHHHHHHHHHHHHTCCCCCCGG
T ss_pred HHHHHHHHHHHHHcCCCccchh
Confidence 9999999999999999876644
No 36
>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3
Probab=100.00 E-value=1.2e-35 Score=301.25 Aligned_cols=251 Identities=13% Similarity=0.105 Sum_probs=206.3
Q ss_pred CcEEE-EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCC
Q 016620 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (386)
Q Consensus 87 ~k~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g 165 (386)
++.|+ ..++|+|++ +++.++||.++|+++++. +||| +++|++....+.+++| |.+ ..+.++.|
T Consensus 194 l~gi~eet~~Gvd~l--~a~~~~Gilv~p~~~vn~-sVae-------~l~r~~~~~~~~l~~g-w~r-----~~~~~l~G 257 (479)
T 1v8b_A 194 IIGVSEETTTGVLRL--KKMDKQNELLFTAINVND-AVTK-------QKYDNVYGCRHSLPDG-LMR-----ATDFLISG 257 (479)
T ss_dssp CCEEEECSHHHHHHH--HHHHHTTCCCSEEEECTT-SHHH-------HTTHHHHHHHHHHHHH-HHH-----HHCCCCTT
T ss_pred eEEEEEeeCccHhHH--HHHHHcCCEEeccCCccH-HHHH-------HHHhchHhHHHHHhhh-hhh-----ccccccCC
Confidence 47887 789999998 789999999999999999 9999 4568887777778777 632 34578999
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||+|+|.||+.+|+++ ++|||+|++||++.....+.. ..+ + ...++++++++||+|++|+
T Consensus 258 ktVgIIG~G~IG~~vA~~l-~~~G~~Viv~d~~~~~~~~a~---------~~g-----~-~~~~l~ell~~aDiVi~~~- 320 (479)
T 1v8b_A 258 KIVVICGYGDVGKGCASSM-KGLGARVYITEIDPICAIQAV---------MEG-----F-NVVTLDEIVDKGDFFITCT- 320 (479)
T ss_dssp SEEEEECCSHHHHHHHHHH-HHHTCEEEEECSCHHHHHHHH---------TTT-----C-EECCHHHHTTTCSEEEECC-
T ss_pred CEEEEEeeCHHHHHHHHHH-HhCcCEEEEEeCChhhHHHHH---------HcC-----C-EecCHHHHHhcCCEEEECC-
Confidence 9999999999999999997 799999999999876532211 111 1 2468999999999999995
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH--HHHcCCcceEEeeccCCCCCCCCCCCCC--CCeEEcCC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE--HLKQNPMFRVGLDVFEDEPYMKPGLSEM--KNAIVVPH 320 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~~--aL~~g~i~gaalDV~~~EP~~~~~L~~~--~nvilTPH 320 (386)
.|.++|+++.|+.||+|++|||+|||++ ||+++|.+ +|++|+|. +++|||+.++ .++||.+ ||+++| |
T Consensus 321 ---~t~~lI~~~~l~~MK~gailiNvgrg~~EId~~aL~~~~AL~~g~I~-a~lDv~plp~--~~~l~~l~~~nvv~t-H 393 (479)
T 1v8b_A 321 ---GNVDVIKLEHLLKMKNNAVVGNIGHFDDEIQVNELFNYKGIHIENVK-PQVDRITLPN--GNKIIVLARGRLLNL-G 393 (479)
T ss_dssp ---SSSSSBCHHHHTTCCTTCEEEECSSTTTSBCHHHHHTSTTCEEEEEE-TTEEEEECTT--SCEEEEEGGGSBHHH-H
T ss_pred ---ChhhhcCHHHHhhcCCCcEEEEeCCCCccccchhhhccccceeeeEe-eeEEEEECCC--CCeeeEecCCCEEEE-e
Confidence 7899999999999999999999999999 99999999 99999998 9999994322 4688888 999999 9
Q ss_pred CC-CCcHH-HHHHHHHHHHHHHHHHHcCC--CCCCCCCCCCcCCCCCCCCCCCCchhhhhhhhCCCCC
Q 016620 321 IA-SASKW-TREGMATLAALNVLGKIKGY--PIWGNPNQVEPFLNENAQPPAASPSIVNSKALGLPVS 384 (386)
Q Consensus 321 ia-~~t~~-~~~~~~~~~~~ni~~~~~g~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (386)
+| +++.+ ...++...+++|+..|++|+ ++.|.|+.+ |.... +.+++ +.| +.+|.-..
T Consensus 394 ~atghp~e~~~~s~a~~~~~ni~~~~~g~~~~l~n~V~~l-p~~~d----e~va~-l~L-~~lG~~l~ 454 (479)
T 1v8b_A 394 CATGHPAFVMSFSFCNQTFAQLDLWQNKDTNKYENKVYLL-PKHLD----EKVAL-YHL-KKLNASLT 454 (479)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHHHHHHTTTSSSCCSSEECC-CHHHH----HHHHH-HHH-GGGTCCCC
T ss_pred ccCCCCchhHHHHHHHHHHHHHHHHHcCCCCcCCcceEeC-ChhhH----HHHHH-HHH-HHcCChHh
Confidence 99 66755 67788889999999999999 999999877 54422 34445 344 66665443
No 37
>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*
Probab=100.00 E-value=2.3e-36 Score=307.51 Aligned_cols=249 Identities=14% Similarity=0.181 Sum_probs=198.4
Q ss_pred CcEEE-EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCC
Q 016620 87 GKAFS-NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (386)
Q Consensus 87 ~k~i~-~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g 165 (386)
++.|+ ..++|+|++ ++++++||.++|++++++ +|||+. +|++....+.+.+| |. . ..+.++.|
T Consensus 214 l~gi~eet~~Gvd~l--~a~~~~Gilv~n~~~vn~-sVae~l-------~r~~~~~~~~l~~g-w~---~--~~g~~L~G 277 (494)
T 3d64_A 214 IKGVTEETTTGVHRL--YQMEKDGRLPFPAFNVND-SVTKSK-------FDNLYGCRESLVDG-IK---R--ATDVMIAG 277 (494)
T ss_dssp CCCEEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHH-------HHHHHHHHTTHHHH-HH---H--HHCCCCTT
T ss_pred cEEEEEEcccCHhhH--HHHHHCCCEEEECCCccH-HHHHHH-------HhhhHhhhhhhhhh-hh---h--ccccccCC
Confidence 37777 789999998 689999999999999999 999943 46665555555555 42 1 34578999
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||+|+|.||+.+|+++ ++|||+|++||++.....+.. ..+ + ...++++++++||+|++|+
T Consensus 278 ktVgIIG~G~IG~~vA~~l-~~~G~~V~v~d~~~~~~~~a~---------~~G-----~-~~~~l~ell~~aDiVi~~~- 340 (494)
T 3d64_A 278 KIAVVAGYGDVGKGCAQSL-RGLGATVWVTEIDPICALQAA---------MEG-----Y-RVVTMEYAADKADIFVTAT- 340 (494)
T ss_dssp CEEEEECCSHHHHHHHHHH-HTTTCEEEEECSCHHHHHHHH---------TTT-----C-EECCHHHHTTTCSEEEECS-
T ss_pred CEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCChHhHHHHH---------HcC-----C-EeCCHHHHHhcCCEEEECC-
Confidence 9999999999999999997 799999999999876532211 011 1 2358999999999999998
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCcceEEeeccCCCCCCC-CCCCCC--CCeEEcCCC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMFRVGLDVFEDEPYMK-PGLSEM--KNAIVVPHI 321 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~~aL~~g~i~gaalDV~~~EP~~~-~~L~~~--~nvilTPHi 321 (386)
+|+++|+++.|++||+|++|||+|||++ ||+++| ++|++|+|. +++|+| |+++ +|||.+ |||++| |+
T Consensus 341 ---~t~~lI~~~~l~~MK~gAilINvgrg~veID~~aL-~AL~~g~I~-~~~Dv~---plp~~~pL~~l~~~nvv~t-H~ 411 (494)
T 3d64_A 341 ---GNYHVINHDHMKAMRHNAIVCNIGHFDSEIDVAST-RQYQWENIK-PQVDHI---IFPDGKRVILLAEGRLVNL-GC 411 (494)
T ss_dssp ---SSSCSBCHHHHHHCCTTEEEEECSSSSCSBCCGGG-TTSEEEEEE-TTEEEE---ECTTSCEEEEEGGGSBHHH-HT
T ss_pred ---CcccccCHHHHhhCCCCcEEEEcCCCcchhchHHH-HhhhcCccc-eeEEEE---ECCCCCchhhcCCCCEEEE-eC
Confidence 6899999999999999999999999999 699999 999999987 556655 6654 689988 999999 99
Q ss_pred C-CCcHH-HHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcCCCCCCCCCCCCchhhhhhhhCCCCC
Q 016620 322 A-SASKW-TREGMATLAALNVLGKIKGYPIWGNPNQVEPFLNENAQPPAASPSIVNSKALGLPVS 384 (386)
Q Consensus 322 a-~~t~~-~~~~~~~~~~~ni~~~~~g~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (386)
| +++.+ ...++...+++|+..|++|+++.|.|+.+ |.- ....+.+ +.| +.+|.-..
T Consensus 412 atg~~~~~~~~~~a~~~~~ni~~~~~g~~~~n~V~~l-p~~----~d~~va~-l~L-~~~g~~~~ 469 (494)
T 3d64_A 412 ATGHPSFVMSNSFTNQTLAQIELFTRGGEYANKVYVL-PKH----LDEKVAR-LHL-ARIGAQLS 469 (494)
T ss_dssp SCCSCHHHHHHHHHHHHHHHHHHHHHGGGSCSSEEEC-CHH----HHHHHHH-HHH-TTTTCCCC
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHcCCCCCCceeeC-Chh----HHHHHHH-HHH-HHcCChHH
Confidence 9 66744 67889999999999999999999999776 431 2233444 344 55665443
No 38
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=99.95 E-value=1e-27 Score=230.48 Aligned_cols=215 Identities=15% Similarity=0.089 Sum_probs=164.3
Q ss_pred CCcEEEEeCCCC-chHHHHHHHhCCCeEEEecCCCCC------CCHHHHHHHhcCCCcEEEec----------------C
Q 016620 14 GKYRVVSTKPMP-GTRWINLLIEQDCRVEICTQKKTI------LSVEDIIALIGDKCDGVIGQ----------------L 70 (386)
Q Consensus 14 ~~~~vlvt~~~~-~~~~~~~l~~~~~~~~~~~~~~~~------~~~~e~~~~~~~~ad~vi~~----------------~ 70 (386)
+.|+|++..... ...+.+.|.+.++++.+....+.. ...+++.+.+. ++|+++.+ .
T Consensus 4 ~~m~i~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~~~~~~~ 82 (293)
T 3d4o_A 4 TGKHVVIIGGDARQLEIIRKLSTFDAKISLVGFDQLDDGFIGVTKMRIDEVDWN-TVDAILLPISGTNEAGKVDTIFSNE 82 (293)
T ss_dssp TTCEEEEECBCHHHHHHHHHHHHTTCEEEEESCTTCC--CTTCEEECGGGCCGG-GCSEEECCTTCCCTTCBCCBSSCSC
T ss_pred cCcEEEEECCCHHHHHHHHHHHhCCCEEEEeccccccccccccccccchHHHHh-cCCEEEeccccccCCceeecccccC
Confidence 446776654322 234678888889998765432211 11244444444 59999985 2
Q ss_pred CccccHHHHHHhhccCCcEEEEccccccccCh-hHHhhCCcEEecCC------CCCchhHHHHHHHHHHHHHhchHHHHH
Q 016620 71 TEDWGETLFAALSRAGGKAFSNMAVGYNNVDV-NAANKYGIAVGNTP------GVLTETTAELAASLSLAAARRIVEADE 143 (386)
Q Consensus 71 ~~~~~~~~l~~l~~l~~k~i~~~~~G~d~id~-~~~~~~gI~v~n~~------~~~~~~vAE~al~~~L~~~R~~~~~~~ 143 (386)
..+++++++++++++ |+|. +|+|++|+ ++++++||.|+|++ ++++.+|||++++++|..
T Consensus 83 ~~~~~~~~l~~~~~l--~~i~---~G~d~id~~~~~~~~gi~v~~~~~~~~~~~~~~~svae~a~~~~l~~--------- 148 (293)
T 3d4o_A 83 SIVLTEEMIEKTPNH--CVVY---SGISNTYLNQCMKKTNRTLVKLMERDDIAIYNSIPTAEGTIMMAIQH--------- 148 (293)
T ss_dssp CCBCCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHHTCEEEEGGGCHHHHHHHHHHHHHHHHHHHHHH---------
T ss_pred CccchHHHHHhCCCC--CEEE---ecCCCHHHHHHHHHcCCeEEEecCCceeeeeccHhHHHHHHHHHHHh---------
Confidence 346889999999987 8987 79999998 89999999999998 889999999999988862
Q ss_pred HHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcc
Q 016620 144 FMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT 223 (386)
Q Consensus 144 ~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (386)
.+.++.|++|||||+|.||+.+|+++ ++||++|++|||+...... ....+ ..
T Consensus 149 ---------------~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g---~~ 200 (293)
T 3d4o_A 149 ---------------TDFTIHGANVAVLGLGRVGMSVARKF-AALGAKVKVGARESDLLAR---------IAEMG---ME 200 (293)
T ss_dssp ---------------CSSCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH---------HHHTT---SE
T ss_pred ---------------cCCCCCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEECCHHHHHH---------HHHCC---Ce
Confidence 12579999999999999999999997 7999999999998754211 01111 11
Q ss_pred ccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016620 224 WKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (386)
Q Consensus 224 ~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~ 276 (386)
.....++++++++||+|++|+|. ++++++.++.||+|+++||++||+.
T Consensus 201 ~~~~~~l~~~l~~aDvVi~~~p~-----~~i~~~~l~~mk~~~~lin~ar~~~ 248 (293)
T 3d4o_A 201 PFHISKAAQELRDVDVCINTIPA-----LVVTANVLAEMPSHTFVIDLASKPG 248 (293)
T ss_dssp EEEGGGHHHHTTTCSEEEECCSS-----CCBCHHHHHHSCTTCEEEECSSTTC
T ss_pred ecChhhHHHHhcCCCEEEECCCh-----HHhCHHHHHhcCCCCEEEEecCCCC
Confidence 11235789999999999999995 7889999999999999999999764
No 39
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=99.91 E-value=2.5e-24 Score=207.46 Aligned_cols=221 Identities=14% Similarity=0.095 Sum_probs=157.5
Q ss_pred CCcEEEEeCCC-CchHHHHHHHhCCCeEEEecCCCCCC------CHHHHHHHhcCCCcEEEec---C-----------Cc
Q 016620 14 GKYRVVSTKPM-PGTRWINLLIEQDCRVEICTQKKTIL------SVEDIIALIGDKCDGVIGQ---L-----------TE 72 (386)
Q Consensus 14 ~~~~vlvt~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~------~~~e~~~~~~~~ad~vi~~---~-----------~~ 72 (386)
+.|||++...- ....+.+.|.+.++++.+....+... ..+++.+.+. ++|+++.+ . ..
T Consensus 6 ~~mki~v~~~~~~~~~~~~~L~~~g~~v~~~~~~~~~~~~~g~~~~~~~~~~~~-~~d~ii~~~~~~~~~~~i~s~~a~~ 84 (300)
T 2rir_A 6 TGLKIAVIGGDARQLEIIRKLTEQQADIYLVGFDQLDHGFTGAVKCNIDEIPFQ-QIDSIILPVSATTGEGVVSTVFSNE 84 (300)
T ss_dssp CSCEEEEESBCHHHHHHHHHHHHTTCEEEEESCTTSSCCCTTEEECCGGGSCGG-GCSEEECCSSCEETTTEECBSSCSS
T ss_pred cCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeccccccccccceeccchHHHHh-cCCEEEeccccccCCcccccccccC
Confidence 45677776432 22346788888899987654332211 1122333344 59999872 1 24
Q ss_pred c--ccHHHHHHhhccCCcEEEEccccccccC-hhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCc
Q 016620 73 D--WGETLFAALSRAGGKAFSNMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGL 149 (386)
Q Consensus 73 ~--~~~~~l~~l~~l~~k~i~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~ 149 (386)
+ ++++.++.++++ |+|. +|+|++| +++++++||.|+|+|+++ ++ ++.|++..+ +|.
T Consensus 85 ~~~~~~~~l~~~~~l--~~i~---~g~~~~d~~~~~~~~gi~v~~~~~~~--~v---------~~~r~~~~~-----~g~ 143 (300)
T 2rir_A 85 EVVLKQDHLDRTPAH--CVIF---SGISNAYLENIAAQAKRKLVKLFERD--DI---------AIYNSIPTV-----EGT 143 (300)
T ss_dssp CEECCHHHHHTSCTT--CEEE---ESSCCHHHHHHHHHTTCCEEEGGGSH--HH---------HHHHHHHHH-----HHH
T ss_pred CccchHHHHhhcCCC--CEEE---EecCCHHHHHHHHHCCCEEEeecCCC--ce---------EEEcCccHH-----HHH
Confidence 5 789999999987 8887 8999999 999999999999999974 33 234555443 233
Q ss_pred cCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC
Q 016620 150 YDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (386)
Q Consensus 150 ~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (386)
|.. .....+.++.|++|||||+|.||+.+|+++ ++||++|++|||+...... +.+.+ .......+
T Consensus 144 ~~~--~~~~~~~~l~g~~v~IiG~G~iG~~~a~~l-~~~G~~V~~~d~~~~~~~~---------~~~~g---~~~~~~~~ 208 (300)
T 2rir_A 144 IML--AIQHTDYTIHGSQVAVLGLGRTGMTIARTF-AALGANVKVGARSSAHLAR---------ITEMG---LVPFHTDE 208 (300)
T ss_dssp HHH--HHHTCSSCSTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH---------HHHTT---CEEEEGGG
T ss_pred HHH--HHHhcCCCCCCCEEEEEcccHHHHHHHHHH-HHCCCEEEEEECCHHHHHH---------HHHCC---CeEEchhh
Confidence 310 001235689999999999999999999997 7999999999998754211 01111 11112357
Q ss_pred HHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016620 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (386)
Q Consensus 230 l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~ 276 (386)
+++++++||+|++|+|. ++++++.++.||+|+++||++||+.
T Consensus 209 l~~~l~~aDvVi~~~p~-----~~i~~~~~~~mk~g~~lin~a~g~~ 250 (300)
T 2rir_A 209 LKEHVKDIDICINTIPS-----MILNQTVLSSMTPKTLILDLASRPG 250 (300)
T ss_dssp HHHHSTTCSEEEECCSS-----CCBCHHHHTTSCTTCEEEECSSTTC
T ss_pred HHHHhhCCCEEEECCCh-----hhhCHHHHHhCCCCCEEEEEeCCCC
Confidence 89999999999999996 6889999999999999999999864
No 40
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=99.90 E-value=9.7e-25 Score=222.66 Aligned_cols=225 Identities=15% Similarity=0.081 Sum_probs=175.3
Q ss_pred EEEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeE
Q 016620 89 AFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTV 168 (386)
Q Consensus 89 ~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~v 168 (386)
++...|+|+|++ .++.++||.++|+++++. +|||+. +|++....+....+ |.. ..+..+.|++|
T Consensus 214 vveetgtGVd~l--~a~~~~Gilv~~~~~vn~-sVae~~-------~r~l~~~~~s~~~g----~~r--~~~~~l~GktV 277 (494)
T 3ce6_A 214 VTEETTTGVLRL--YQFAAAGDLAFPAINVND-SVTKSK-------FDNKYGTRHSLIDG----INR--GTDALIGGKKV 277 (494)
T ss_dssp EEECSHHHHHHH--HHHHHTTCCCSCEEECTT-SHHHHT-------THHHHHHHHHHHHH----HHH--HHCCCCTTCEE
T ss_pred EEEEeCCChhHH--HHHHHcCCEEEecCCccH-HHHHHH-------HhhhhhhhhhhhHH----HHh--ccCCCCCcCEE
Confidence 455889999998 678999999999999998 999953 34444333333332 311 12347899999
Q ss_pred EEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCCh
Q 016620 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK 248 (386)
Q Consensus 169 gIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~ 248 (386)
+|+|+|.||+.+|+++ +++|++|+++|+++...... ...+. ...+++++++.+|+|+.|++
T Consensus 278 ~IiG~G~IG~~~A~~l-ka~Ga~Viv~d~~~~~~~~A---------~~~Ga------~~~~l~e~l~~aDvVi~atg--- 338 (494)
T 3ce6_A 278 LICGYGDVGKGCAEAM-KGQGARVSVTEIDPINALQA---------MMEGF------DVVTVEEAIGDADIVVTATG--- 338 (494)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHH---------HHTTC------EECCHHHHGGGCSEEEECSS---
T ss_pred EEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH---------HHcCC------EEecHHHHHhCCCEEEECCC---
Confidence 9999999999999997 79999999999987653211 11121 13578899999999999985
Q ss_pred hhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHH-HHHcCCcceEEeeccCCCCCCCC-CCCCCCCeE----EcCCC
Q 016620 249 TTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVE-HLKQNPMFRVGLDVFEDEPYMKP-GLSEMKNAI----VVPHI 321 (386)
Q Consensus 249 ~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~~-aL~~g~i~gaalDV~~~EP~~~~-~L~~~~nvi----lTPHi 321 (386)
+.++++.+.|+.||+|++++|+||+.. +|+++|.+ +|+++++. +.+|+++.++...+ .|+..+|++ +|||+
T Consensus 339 -t~~~i~~~~l~~mk~ggilvnvG~~~~eId~~aL~~~aL~~~~I~-~~ldv~~~~~~~~~l~LL~~grlvnL~~~TPH~ 416 (494)
T 3ce6_A 339 -NKDIIMLEHIKAMKDHAILGNIGHFDNEIDMAGLERSGATRVNVK-PQVDLWTFGDTGRSIIVLSEGRLLNLGNATGHP 416 (494)
T ss_dssp -SSCSBCHHHHHHSCTTCEEEECSSSGGGBCHHHHHHTTCEEEEEE-TTEEEEECTTTCCEEEEEGGGSCHHHHHSCCSC
T ss_pred -CHHHHHHHHHHhcCCCcEEEEeCCCCCccCHHHHHHhhhccceEE-EEEEEeecCCcchHHHHHhCCCEEeccCCCCCc
Confidence 467888899999999999999999999 99999998 88888877 66799876442222 466778888 99999
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHcCCCCCCCC
Q 016620 322 ASASKWTREGMATLAALNVLGKIKGYPIWGNP 353 (386)
Q Consensus 322 a~~t~~~~~~~~~~~~~ni~~~~~g~~~~~~v 353 (386)
++.+.++ +...+.++++.|.+|+++.+.|
T Consensus 417 a~~~~~s---~~~qa~~ai~~~~~g~~~~~~V 445 (494)
T 3ce6_A 417 SFVMSNS---FANQTIAQIELWTKNDEYDNEV 445 (494)
T ss_dssp HHHHHHH---HHHHHHHHHHHHHTGGGCCSSE
T ss_pred cccchHH---HHHHHHHHHHHHHcCCCCCCEE
Confidence 9877654 4677899999999999888776
No 41
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=99.89 E-value=1.1e-22 Score=202.02 Aligned_cols=290 Identities=16% Similarity=0.132 Sum_probs=196.0
Q ss_pred HHHHHHhCCCeEEEecCC--CCCCCHHHHH-----------HHhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEccc
Q 016620 29 WINLLIEQDCRVEICTQK--KTILSVEDII-----------ALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (386)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~--~~~~~~~e~~-----------~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~ 95 (386)
..+.|.+.|+++.+-... ...++.++.. +.+. ++|+|+ ...++.++++....+. ..++.....
T Consensus 22 ~v~~L~~~G~~V~ve~~ag~~~~f~d~~y~~aGa~i~~~~~~~~~-~adii~-~vk~p~~~e~~~l~~~--~~l~~~~~~ 97 (377)
T 2vhw_A 22 GVAELTRRGHEVLIQAGAGEGSAITDADFKAAGAQLVGTADQVWA-DADLLL-KVKEPIAAEYGRLRHG--QILFTFLHL 97 (377)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEESCHHHHHH-HCSEEE-CSSCCCGGGGGGCCTT--CEEEECCCG
T ss_pred HHHHHHhCCCEEEEeCCCCcCCCCCHHHHHHCCCEEecCHHHHhc-cCCEEE-EeCCCChHHHhhcCCC--CEEEEEecc
Confidence 467787888888653322 1234555554 2222 478664 4455666665444443 366777677
Q ss_pred cccccChhHHhhCCcEEe----------cCCCCCchhHHHHHHHHHHHHH-hchHHHHHHHHcCccCCCCCCcccccccC
Q 016620 96 GYNNVDVNAANKYGIAVG----------NTPGVLTETTAELAASLSLAAA-RRIVEADEFMRAGLYDGWLPNLFVGNLLK 164 (386)
Q Consensus 96 G~d~id~~~~~~~gI~v~----------n~~~~~~~~vAE~al~~~L~~~-R~~~~~~~~~~~~~~~~w~~~~~~g~~l~ 164 (386)
++|.-.++++.++||.+. |.|.+ .++||++..+++.+. |++. ....|.|. |... . .++.
T Consensus 98 ~~~~~~l~~l~~~gi~~ia~e~v~~~~~~~p~~--s~~ae~ag~~a~~~a~r~l~----~~~~g~~~-~~~~--~-~~l~ 167 (377)
T 2vhw_A 98 AASRACTDALLDSGTTSIAYETVQTADGALPLL--APMSEVAGRLAAQVGAYHLM----RTQGGRGV-LMGG--V-PGVE 167 (377)
T ss_dssp GGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTT--HHHHHHHHHHHHHHHHHHTS----GGGTSCCC-CTTC--B-TTBC
T ss_pred cCCHHHHHHHHHcCCeEEEeeeccccCCCcccc--CchHHHHHHHHHHHHHHHHH----HhcCCCcc-cccC--C-CCCC
Confidence 888888999999999997 56665 456699985555444 6663 23345442 2221 1 3689
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC-ccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ell~~aDiVvl~ 243 (386)
|++|+|+|+|.||+.+|+.+ +++|++|+++|++..... . ... ..+..- .......++++++.++|+|+.+
T Consensus 168 g~~V~ViG~G~iG~~~a~~a-~~~Ga~V~~~d~~~~~l~-~-~~~------~~g~~~~~~~~~~~~l~~~l~~aDvVi~~ 238 (377)
T 2vhw_A 168 PADVVVIGAGTAGYNAARIA-NGMGATVTVLDINIDKLR-Q-LDA------EFCGRIHTRYSSAYELEGAVKRADLVIGA 238 (377)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHH-H-HHH------HTTTSSEEEECCHHHHHHHHHHCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-H-HHH------hcCCeeEeccCCHHHHHHHHcCCCEEEEC
Confidence 99999999999999999996 799999999999875421 1 110 011110 0000123678889999999997
Q ss_pred c--CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCC-CCCC-CCCCCCCCCeE--E
Q 016620 244 P--VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED-EPYM-KPGLSEMKNAI--V 317 (386)
Q Consensus 244 l--Plt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~-EP~~-~~~L~~~~nvi--l 317 (386)
+ |.+ +|.++++++.++.||+|+++||+|.. .|. ||+. ||.+ ++|++..+||+ +
T Consensus 239 ~~~p~~-~t~~li~~~~l~~mk~g~~iV~va~~-------------~Gg-------v~e~~ep~~~~~~~~~~~~v~i~~ 297 (377)
T 2vhw_A 239 VLVPGA-KAPKLVSNSLVAHMKPGAVLVDIAID-------------QGG-------CFEGSRPTTYDHPTFAVHDTLFYC 297 (377)
T ss_dssp CCCTTS-CCCCCBCHHHHTTSCTTCEEEEGGGG-------------TTC-------SBTTCCCBCSSSCEEEETTEEEEC
T ss_pred CCcCCC-CCcceecHHHHhcCCCCcEEEEEecC-------------CCC-------ccccccCCCCCCCEEEECCEEEEe
Confidence 6 554 78899999999999999999999831 121 6877 8874 46899999998 9
Q ss_pred cCCCCCCcHHHH---------HHHHHHHHHHHH-HHHcCCCCCCCCCCCCcCCCC
Q 016620 318 VPHIASASKWTR---------EGMATLAALNVL-GKIKGYPIWGNPNQVEPFLNE 362 (386)
Q Consensus 318 TPHia~~t~~~~---------~~~~~~~~~ni~-~~~~g~~~~~~v~~~~~~~~~ 362 (386)
|||+++.+..+. ..+.+++.++.. .+.+++++.+.+|..++++..
T Consensus 298 ~phl~~~~~~~as~~~~~~~~~~~~~l~~~g~~~~~~~~~~l~~~v~~~~G~i~~ 352 (377)
T 2vhw_A 298 VANMPASVPKTSTYALTNATMPYVLELADHGWRAACRSNPALAKGLSTHEGALLS 352 (377)
T ss_dssp BTTGGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHTTEEEETTEECC
T ss_pred cCCcchhhHHHHHHHHHHHHHHHHHHHHhCChhhhhhcChHHhCcEEeeCCEEcC
Confidence 999999886521 233344445533 666788899999987788754
No 42
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=99.80 E-value=5.8e-19 Score=174.70 Aligned_cols=293 Identities=15% Similarity=0.151 Sum_probs=183.7
Q ss_pred HHHHHHHhCCCeEEEecCC--CCCCCHHHHHHH---------hcCCCcEEEecCCccccHHHHHHhhccCCcEEEEcccc
Q 016620 28 RWINLLIEQDCRVEICTQK--KTILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVG 96 (386)
Q Consensus 28 ~~~~~l~~~~~~~~~~~~~--~~~~~~~e~~~~---------~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~G 96 (386)
+..+.|.+.|+++.+-... ...++.++..+. .. ++|+|+.. .+++.++ ++.+++ |.+++.....+
T Consensus 21 ~~v~~L~~~g~~v~ve~~ag~~~~~~d~~y~~aga~i~~~~~~~-~ad~il~v-k~p~~~~-~~~l~~-~~~~~~~~~~~ 96 (369)
T 2eez_A 21 GGVESLVRRGHTVLVERGAGEGSGLSDAEYARAGAELVGREEAW-GAEMVVKV-KEPLPEE-YGFLRE-GLILFTYLHLA 96 (369)
T ss_dssp HHHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECHHHHT-TSSEEECS-SCCCGGG-GGGCCT-TCEEEECCCGG
T ss_pred HHHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEeccccee-cCCEEEEE-CCCCHHH-HhhcCC-CcEEEEEeccc
Confidence 3467888889888653322 124566666541 22 58987743 4455444 555533 44889998999
Q ss_pred ccccChhHHhhCCcEEe---cCCCC-Cc----hhHHHHHH--HHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCC
Q 016620 97 YNNVDVNAANKYGIAVG---NTPGV-LT----ETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (386)
Q Consensus 97 ~d~id~~~~~~~gI~v~---n~~~~-~~----~~vAE~al--~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~ 166 (386)
.|..+++++.++||.+. +.+.. .. .++++.+- +.+++ .+.+... ..|. ..|... ..++.++
T Consensus 97 ~~~~~~~~l~~~gi~~ia~e~~~~~~~~~~~l~~~s~~ag~~av~~a-~~~l~~~----~~g~-~~~~~~---~~~l~~~ 167 (369)
T 2eez_A 97 ADRGLTEAMLRSGVTGIAYETVQLPDGTLPLLVPMSEVAGRMAPQVG-AQFLEKP----KGGR-GVLLGG---VPGVAPA 167 (369)
T ss_dssp GCHHHHHHHHHHTCEEEEGGGCCCTTCCCTTTHHHHHHHHHHHHHHH-HHHTSGG----GTSC-CCCTTC---BTBBCCC
T ss_pred CCHHHHHHHHHCCCeEEEeeccccccCCeeecccchHHHHHHHHHHH-HHHHHHh----cCCC-ceecCC---CCCCCCC
Confidence 99999999999999998 44432 11 44555444 33322 2222211 0121 012111 1368999
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC-ccccccCCHHHHhhhCCEEEEccC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP-VTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
+|+|+|.|.||+.+|+.+ +++|++|+++|++.... +...+ ..+..- .......++++++..+|+|+.|++
T Consensus 168 ~V~ViGaG~iG~~~a~~l-~~~Ga~V~~~d~~~~~~-~~~~~-------~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g 238 (369)
T 2eez_A 168 SVVILGGGTVGTNAAKIA-LGMGAQVTILDVNHKRL-QYLDD-------VFGGRVITLTATEANIKKSVQHADLLIGAVL 238 (369)
T ss_dssp EEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHH-------HTTTSEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred EEEEECCCHHHHHHHHHH-HhCCCEEEEEECCHHHH-HHHHH-------hcCceEEEecCCHHHHHHHHhCCCEEEECCC
Confidence 999999999999999997 79999999999987542 11100 011110 000112457788899999999999
Q ss_pred CCh-hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC-CCCCCCCCCeE-------
Q 016620 246 LDK-TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM-KPGLSEMKNAI------- 316 (386)
Q Consensus 246 lt~-~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~-~~~L~~~~nvi------- 316 (386)
... .+..++.++.++.||+|+++||++-. .| |+ +|++ ||.+ ++|++..+|+.
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~-------------~g---g~-~d~~--ep~~~~~~~~~~~~v~~~~v~~l 299 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVD-------------QG---GC-VETI--RPTTHAEPTYVVDGVVHYGVANM 299 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC--------------------------------------CEETTEEEECCSCS
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEecC-------------CC---CC-CCcc--cCCCCCCCEEEECCEEEEeeCCc
Confidence 765 57788899999999999999999831 12 44 9998 6653 45788889999
Q ss_pred --EcCCCCCC--cHHHHHHHHHHHHHHHHHHHcCCCCCCCCCCCCcCCC
Q 016620 317 --VVPHIASA--SKWTREGMATLAALNVLGKIKGYPIWGNPNQVEPFLN 361 (386)
Q Consensus 317 --lTPHia~~--t~~~~~~~~~~~~~ni~~~~~g~~~~~~v~~~~~~~~ 361 (386)
.|||+|+. +......+.+++.+++..++.++++.+.+|..++++-
T Consensus 300 p~~~p~~as~~~~~~~~~~l~~l~~~g~~~~~~~~~l~~~~~~~~G~~~ 348 (369)
T 2eez_A 300 PGAVPRTSTFALTNQTLPYVLKLAEKGLDALLEDAALLKGLNTHKGRLT 348 (369)
T ss_dssp GGGSHHHHHHHHHHHHHHHHHHHHHHTTHHHHSCHHHHTTEEEETTEEC
T ss_pred chhcHHHHHHHHHHHHHHHHHHHHhcChhhhhcChHHhcCEEeeCCEEc
Confidence 88998884 4566788888888899888899889999986655553
No 43
>1gtm_A Glutamate dehydrogenase; oxidoreductase, NAD, NADP; 2.20A {Pyrococcus furiosus} SCOP: c.2.1.7 c.58.1.1 PDB: 1bvu_A 1euz_A
Probab=99.79 E-value=1.1e-20 Score=189.27 Aligned_cols=154 Identities=19% Similarity=0.232 Sum_probs=123.5
Q ss_pred cc-cCCCeEEEEecChhHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 161 NL-LKGQTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 161 ~~-l~g~~vgIvG~G~IG~~iA~~L~~~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
.+ ++|+||||+|+|+||+.+|+++ ++ |||+|+++++..... | .....+++++++.+|
T Consensus 207 ~~~l~gktvgI~G~G~VG~~vA~~l-~~~~G~kVv~~sD~~g~~-------~-------------~~~gvdl~~L~~~~d 265 (419)
T 1gtm_A 207 WDTLKGKTIAIQGYGNAGYYLAKIM-SEDFGMKVVAVSDSKGGI-------Y-------------NPDGLNADEVLKWKN 265 (419)
T ss_dssp CSCSTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEE-------E-------------EEEEECHHHHHHHHH
T ss_pred CcccCCCEEEEEcCCHHHHHHHHHH-HHhcCCEEEEEeCCCccc-------c-------------CccCCCHHHHHHHHH
Confidence 56 9999999999999999999997 68 999999995432110 0 001136777776555
Q ss_pred E-EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCC--CCCCCCCCe
Q 016620 239 V-ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMK--PGLSEMKNA 315 (386)
Q Consensus 239 i-Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~--~~L~~~~nv 315 (386)
. .++ +|+ ++|++ |+.+.|..||. .+|||++||.+||+++ +++|+++.|.+++ +||++. ++|++.+||
T Consensus 266 ~~~~l-~~l-~~t~~-i~~~~l~~mk~-dilIn~ArG~~Vde~a-~~aL~~~~I~~aA-----neP~t~~a~~ll~~~~V 335 (419)
T 1gtm_A 266 EHGSV-KDF-PGATN-ITNEELLELEV-DVLAPAAIEEVITKKN-ADNIKAKIVAEVA-----NGPVTPEADEILFEKGI 335 (419)
T ss_dssp HHSSS-TTC-TTSEE-ECHHHHHHSCC-SEEEECSCSCCBCTTG-GGGCCCSEEECCS-----SSCBCHHHHHHHHHTTC
T ss_pred hcCEe-ecC-ccCee-eCHHHHHhCCC-CEEEECCCcccCCHHH-HHHhcCCEEEEee-----CCCCCcchHHHHhcCCE
Confidence 4 222 566 57888 89999999998 5999999999999999 6999999999988 899863 489999999
Q ss_pred EEcCCC----C-----------------CCcHHHHHHHHHHHHHHHHHHHc
Q 016620 316 IVVPHI----A-----------------SASKWTREGMATLAALNVLGKIK 345 (386)
Q Consensus 316 ilTPHi----a-----------------~~t~~~~~~~~~~~~~ni~~~~~ 345 (386)
++|||+ | |.+.+..+++.+.+.+|+.++++
T Consensus 336 ~itPhiaaNaGGvt~s~~E~~qn~~~~~w~~~ev~~~l~~~m~~~~~~~~~ 386 (419)
T 1gtm_A 336 LQIPDFLCNAGGVTVSYFEWVQNITGYYWTIEEVRERLDKKMTKAFYDVYN 386 (419)
T ss_dssp EEECHHHHTTHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEECchhhhCCcceeeeehhhhcccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 999999 5 56677888899888899888873
No 44
>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*
Probab=99.76 E-value=3.5e-17 Score=163.45 Aligned_cols=236 Identities=19% Similarity=0.219 Sum_probs=148.1
Q ss_pred eCCCCCcEEEEeCCCCchH--HHHHHHhCCCeEEEecCCCCCCCHHHHHHHhcC-CCcEEEecCCccccHHHHHH-----
Q 016620 10 WNPNGKYRVVSTKPMPGTR--WINLLIEQDCRVEICTQKKTILSVEDIIALIGD-KCDGVIGQLTEDWGETLFAA----- 81 (386)
Q Consensus 10 ~~~~~~~~vlvt~~~~~~~--~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~-~ad~vi~~~~~~~~~~~l~~----- 81 (386)
.+|.+..||..+-.+..+. .++-|.+.|.++..+..... .|.+++...+.. +.. ++.+..+. .++.+..
T Consensus 38 ~~pl~g~ri~~~lh~~~~Ta~l~~tL~~~GA~v~~~~~n~~-stqd~~aaal~~~gi~-v~a~~ge~-~~ey~~~~~~~l 114 (436)
T 3h9u_A 38 SKPLKGAKIAGCLHMTMQTAVLIETLVELGAEVRWASCNIF-STQDHAAAAIAKRGIP-VFAWKGET-EEEYMWCMKQTL 114 (436)
T ss_dssp TCTTTTCEEEEESCCSHHHHHHHHHHHHTTCEEEEECSSTT-TCCHHHHHHHHHTTCC-EEECTTCC-HHHHHHHHHHTT
T ss_pred cCCCCCCEEEEEeccHHHHHHHHHHHHHcCCEEEEecCCCC-CCcHHHHHHHHhcCCe-EEEeCCCC-HHHHHHHHHHHH
Confidence 4677788887766655432 45667777888765544332 245555544432 111 22222211 1222211
Q ss_pred --------------------------hhccCCc---EEEEccccccccC-hhHHhhCCcEEecCCCCCchhHHHHHHHHH
Q 016620 82 --------------------------LSRAGGK---AFSNMAVGYNNVD-VNAANKYGIAVGNTPGVLTETTAELAASLS 131 (386)
Q Consensus 82 --------------------------l~~l~~k---~i~~~~~G~d~id-~~~~~~~gI~v~n~~~~~~~~vAE~al~~~ 131 (386)
.+++--+ ..=-.++|+..+. .....+.+|+|.|++........+...+..
T Consensus 115 ~~~~~~~~p~~ilDdGgdl~~~~h~~~~~~~~~i~G~~EeTttGv~rL~~~~~~g~L~iPVinvndsvtk~~~Dn~~Gt~ 194 (436)
T 3h9u_A 115 KGFSGDGYPNMLLDDGGDLTNYVLDECKELDGKIYGVSEETTTGVKNLYKRLQRGKLTIPAMNVNDSVTKSKFDNLYGCR 194 (436)
T ss_dssp SCBTTTBCCSEEEESSSHHHHHHHHHC-CCTTTCCCEEECSHHHHHHHHHHHHHTCCCSCEEECTTSHHHHTTHHHHHHH
T ss_pred HhcccCCCCceEeccccHHHHHHHHHhHHHHhhccceeeccCcChHHHHHHHHcCCCCCceEeechhhhhhhhhccccch
Confidence 1221101 1122334443332 223457889999998755555444333322
Q ss_pred HHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhh
Q 016620 132 LAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYG 211 (386)
Q Consensus 132 L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~ 211 (386)
-++.+.+ .+. .+.++.|++|||+|+|.||+.+|++| ++||++|+++|+++.......
T Consensus 195 ~slldgi------~ra-----------tg~~L~GktVgIiG~G~IG~~vA~~L-ka~Ga~Viv~D~~p~~a~~A~----- 251 (436)
T 3h9u_A 195 ESLVDGI------KRA-----------TDVMIAGKTACVCGYGDVGKGCAAAL-RGFGARVVVTEVDPINALQAA----- 251 (436)
T ss_dssp HHHHHHH------HHH-----------HCCCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHH-----
T ss_pred HHHHHHH------HHh-----------cCCcccCCEEEEEeeCHHHHHHHHHH-HHCCCEEEEECCChhhhHHHH-----
Confidence 2222211 111 23579999999999999999999997 799999999999875432211
Q ss_pred hhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHH
Q 016620 212 QFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEH 285 (386)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~~a 285 (386)
..+ . ...+++|++++||+|+++ +.|.++|+++.|++||+|+++||+|||.+ ||.++|.+.
T Consensus 252 ----~~G-----~-~~~sL~eal~~ADVVilt----~gt~~iI~~e~l~~MK~gAIVINvgRg~vEID~~~L~~~ 312 (436)
T 3h9u_A 252 ----MEG-----Y-QVLLVEDVVEEAHIFVTT----TGNDDIITSEHFPRMRDDAIVCNIGHFDTEIQVAWLKAN 312 (436)
T ss_dssp ----HTT-----C-EECCHHHHTTTCSEEEEC----SSCSCSBCTTTGGGCCTTEEEEECSSSGGGBCHHHHHHH
T ss_pred ----HhC-----C-eecCHHHHHhhCCEEEEC----CCCcCccCHHHHhhcCCCcEEEEeCCCCCccCHHHHHhh
Confidence 111 1 246899999999999963 46899999999999999999999999997 999999864
No 45
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=99.70 E-value=9.6e-17 Score=160.47 Aligned_cols=229 Identities=14% Similarity=0.159 Sum_probs=150.0
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHHHH---------hcCCCcEEEecCCccccHHHHHHhhccCCcEEEEccccc
Q 016620 29 WINLLIEQDCRVEICTQKK--TILSVEDIIAL---------IGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGY 97 (386)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~~e~~~~---------~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~G~ 97 (386)
..+.|.+.|+++.+..... ..++.++..+. +. ++|+++.. .++ ..+.++.++. ++++|...+.|+
T Consensus 29 ~v~~L~~~G~~V~ve~~ag~~~gf~d~~y~~aGa~i~~~~~~~-~adiil~v-k~p-~~~~i~~l~~-~~~li~~~~~~~ 104 (401)
T 1x13_A 29 TVEQLLKLGFTVAVESGAGQLASFDDKAFVQAGAEIVEGNSVW-QSEIILKV-NAP-LDDEIALLNP-GTTLVSFIWPAQ 104 (401)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHHTCEEECGGGGG-SSSEEECS-SCC-CHHHHTTCCT-TCEEEECCCGGG
T ss_pred HHHHHHHCCCEEEEEECCCcccCCChHHHHHCCCEEeccHHHh-cCCeEEEe-CCC-CHHHHHHhcC-CCcEEEEecCCC
Confidence 4677888898886643321 23466666543 32 38887754 333 3566677632 349999999999
Q ss_pred cccChhHHhhCCcEEecCCCCCchhHHHHHHHHH---HHHHhchHHHHHHHHcCcc--CCCCCCcc--cccccCCCeEEE
Q 016620 98 NNVDVNAANKYGIAVGNTPGVLTETTAELAASLS---LAAARRIVEADEFMRAGLY--DGWLPNLF--VGNLLKGQTVGV 170 (386)
Q Consensus 98 d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~---L~~~R~~~~~~~~~~~~~~--~~w~~~~~--~g~~l~g~~vgI 170 (386)
|+.|++++.++||.+.+ .+.|+|++.++. ++..+.+.. ...++.+.| ..|..... .| ++.|++|+|
T Consensus 105 d~~~~~al~~~gI~v~~-----~e~v~~~~~a~~l~~l~~~a~~ag-~~av~~~~~~~~~~~~~~~~~~g-~l~g~~V~V 177 (401)
T 1x13_A 105 NPELMQKLAERNVTVMA-----MDSVPRISRAQSLDALSSMANIAG-YRAIVEAAHEFGRFFTGQITAAG-KVPPAKVMV 177 (401)
T ss_dssp CHHHHHHHHHTTCEEEE-----GGGCCCSGGGGGGCHHHHHHHHHH-HHHHHHHHHHCSSCSSCEEETTE-EECCCEEEE
T ss_pred CHHHHHHHHHCCCEEEE-----eehhhhhhhhcccchHHHHHHHHH-HHHHHHHHHhcccccCCceeecc-CcCCCEEEE
Confidence 99999999999999964 455565555443 333332222 223333322 22221100 11 578999999
Q ss_pred EecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcc------------cc---c-------cC
Q 016620 171 IGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVT------------WK---R-------AS 228 (386)
Q Consensus 171 vG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~---~-------~~ 228 (386)
+|+|.||..+++.+ +++|++|+++|++...... ... .+..... .. . ..
T Consensus 178 iGaG~iG~~aa~~a-~~~Ga~V~v~D~~~~~~~~--~~~-------lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 247 (401)
T 1x13_A 178 IGAGVAGLAAIGAA-NSLGAIVRAFDTRPEVKEQ--VQS-------MGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEME 247 (401)
T ss_dssp ECCSHHHHHHHHHH-HHTTCEEEEECSCGGGHHH--HHH-------TTCEECCC--------CCHHHHHHSHHHHHHHHH
T ss_pred ECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHH--HHH-------cCCEEEEecccccccccccchhhccHHHHHHHHH
Confidence 99999999999996 7999999999998754211 111 1110000 00 0 01
Q ss_pred CHHHHhhhCCEEEEc--cCCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccCH
Q 016620 229 SMDEVLREADVISLH--PVLDKTTYHLINKERLATMKKEAILVNCS--RGPVIDE 279 (386)
Q Consensus 229 ~l~ell~~aDiVvl~--lPlt~~t~~li~~~~~~~mk~gailIN~a--Rg~~vde 279 (386)
++++++..+|+|+.| +|.. .+..+++++.++.||+|+++||+| ||+.+++
T Consensus 248 ~l~e~~~~aDvVI~~~~~pg~-~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~ 301 (401)
T 1x13_A 248 LFAAQAKEVDIIVTTALIPGK-PAPKLITREMVDSMKAGSVIVDLAAQNGGNCEY 301 (401)
T ss_dssp HHHHHHHHCSEEEECCCCTTS-CCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTT
T ss_pred HHHHHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCc
Confidence 377888999999999 5542 366889999999999999999999 8887764
No 46
>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}
Probab=99.69 E-value=1.6e-16 Score=158.58 Aligned_cols=141 Identities=16% Similarity=0.216 Sum_probs=105.8
Q ss_pred hCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHh
Q 016620 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (386)
Q Consensus 107 ~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~ 186 (386)
...+++.|+.. ++..+-+-....+.+.+..... + ..+.++.|++|||+|+|.||+.+|+++ +
T Consensus 206 ~L~~PvinVnd----s~tK~~fDn~yG~~eslvdgI~--R-----------atg~~L~GKTVgVIG~G~IGr~vA~~l-r 267 (464)
T 3n58_A 206 LLPFPAINVND----SVTKSKFDNKYGCKESLVDGIR--R-----------GTDVMMAGKVAVVCGYGDVGKGSAQSL-A 267 (464)
T ss_dssp CCCSCEEECTT----SHHHHTTHHHHHHHHHHHHHHH--H-----------HHCCCCTTCEEEEECCSHHHHHHHHHH-H
T ss_pred CCCCCEEeecc----HhhhhhhhhhhcchHHHHHHHH--H-----------hcCCcccCCEEEEECcCHHHHHHHHHH-H
Confidence 45688888765 4444544444444443332221 1 123679999999999999999999997 7
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCc
Q 016620 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEA 266 (386)
Q Consensus 187 ~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~ga 266 (386)
+|||+|+++|+++........ .+ + ...++++++++||+|+++. .|.++|+++.|++||+|+
T Consensus 268 afGa~Viv~d~dp~~a~~A~~---------~G-----~-~vv~LeElL~~ADIVv~at----gt~~lI~~e~l~~MK~GA 328 (464)
T 3n58_A 268 GAGARVKVTEVDPICALQAAM---------DG-----F-EVVTLDDAASTADIVVTTT----GNKDVITIDHMRKMKDMC 328 (464)
T ss_dssp HTTCEEEEECSSHHHHHHHHH---------TT-----C-EECCHHHHGGGCSEEEECC----SSSSSBCHHHHHHSCTTE
T ss_pred HCCCEEEEEeCCcchhhHHHh---------cC-----c-eeccHHHHHhhCCEEEECC----CCccccCHHHHhcCCCCe
Confidence 999999999987654322211 11 1 2468999999999999875 478999999999999999
Q ss_pred EEEEcCCCcc-cCHHHHHH
Q 016620 267 ILVNCSRGPV-IDEVALVE 284 (386)
Q Consensus 267 ilIN~aRg~~-vde~aL~~ 284 (386)
+|||+|||.+ +|.++|.+
T Consensus 329 ILINvGRgdvEID~~aL~~ 347 (464)
T 3n58_A 329 IVGNIGHFDNEIQVAALRN 347 (464)
T ss_dssp EEEECSSSTTTBTCGGGTT
T ss_pred EEEEcCCCCcccCHHHHHh
Confidence 9999999998 99988874
No 47
>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*
Probab=99.65 E-value=4e-15 Score=148.27 Aligned_cols=103 Identities=21% Similarity=0.401 Sum_probs=86.1
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
..+.|++|+|+|+|.||+.+|+++ ++||++|+++|+++........ .+ + ...++++++++||+|
T Consensus 216 ~~L~GktV~ViG~G~IGk~vA~~L-ra~Ga~Viv~D~dp~ra~~A~~---------~G-----~-~v~~Leeal~~ADIV 279 (435)
T 3gvp_A 216 MMFGGKQVVVCGYGEVGKGCCAAL-KAMGSIVYVTEIDPICALQACM---------DG-----F-RLVKLNEVIRQVDIV 279 (435)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHHH---------TT-----C-EECCHHHHTTTCSEE
T ss_pred ceecCCEEEEEeeCHHHHHHHHHH-HHCCCEEEEEeCChhhhHHHHH---------cC-----C-EeccHHHHHhcCCEE
Confidence 579999999999999999999997 7999999999988754322211 11 1 246899999999999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHH
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALV 283 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~ 283 (386)
++| +.|.++|+++.|+.||+|+++||+|||++ +|.++|.
T Consensus 280 i~a----tgt~~lI~~e~l~~MK~gailINvgrg~~EId~~~L~ 319 (435)
T 3gvp_A 280 ITC----TGNKNVVTREHLDRMKNSCIVCNMGHSNTEIDVASLR 319 (435)
T ss_dssp EEC----SSCSCSBCHHHHHHSCTTEEEEECSSTTTTBTGGGGC
T ss_pred EEC----CCCcccCCHHHHHhcCCCcEEEEecCCCccCCHHHHH
Confidence 995 36889999999999999999999999998 8877764
No 48
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=99.65 E-value=1.3e-15 Score=151.49 Aligned_cols=239 Identities=15% Similarity=0.166 Sum_probs=145.6
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHH-----------HHhcCCCcEEEecCCccc----cHHHHHHhhccCCcEEE
Q 016620 29 WINLLIEQDCRVEICTQKK--TILSVEDII-----------ALIGDKCDGVIGQLTEDW----GETLFAALSRAGGKAFS 91 (386)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~~e~~-----------~~~~~~ad~vi~~~~~~~----~~~~l~~l~~l~~k~i~ 91 (386)
..+.|.+.|+++.+..... ..++.++.. +.+. ++|+++.. .+++ +++.++.++. +.+++.
T Consensus 22 ~v~~L~~~G~~V~ve~~ag~~~~~~d~~y~~aGa~i~~~~~~~~~-~adiil~v-~~p~~~~~~~~~i~~l~~-~~~~i~ 98 (384)
T 1l7d_A 22 VVKKLVGLGFEVIVEQGAGVGASITDDALTAAGATIASTAAQALS-QADVVWKV-QRPMTAEEGTDEVALIKE-GAVLMC 98 (384)
T ss_dssp HHHHHHHTTCEEEEETTTTGGGTCCHHHHHHTTCEEESSHHHHHS-SCSEEEEE-ECCCCGGGSCCGGGGSCT-TCEEEE
T ss_pred HHHHHHhCCCEEEEEcCCCccCCCCHHHHHHCCCEEecChhhhhc-CCCEEEEe-cCcccccCCHHHHHhhcc-CCEEEE
Confidence 4677888888886633221 234555554 3344 58988765 3344 5677777764 348898
Q ss_pred EccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCcc--CCCCCCcccc-cccCCCeE
Q 016620 92 NMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLY--DGWLPNLFVG-NLLKGQTV 168 (386)
Q Consensus 92 ~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~--~~w~~~~~~g-~~l~g~~v 168 (386)
....+.|+.+++++.++||.+++. ....+.+++..+. +|+..+.+ .....+..+.| ..|.+....+ .++.|++|
T Consensus 99 ~~~~~~~~~~~~~~~~~gi~~~~~-e~~~~~~~~~~l~-~l~~~a~~-ag~~av~~~~~~~~~~~~~~~~~~~~l~g~~V 175 (384)
T 1l7d_A 99 HLGALTNRPVVEALTKRKITAYAM-ELMPRISRAQSMD-ILSSQSNL-AGYRAVIDGAYEFARAFPMMMTAAGTVPPARV 175 (384)
T ss_dssp ECCGGGCHHHHHHHHHTTCEEEEG-GGCCCSGGGGGGC-HHHHHHHH-HHHHHHHHHHHHCSSCSSCEEETTEEECCCEE
T ss_pred EecccCCHHHHHHHHHCCCEEEEe-ccccccccccccc-hhhHHHHH-HHHHHHHHHHHHhhhcccchhccCCCCCCCEE
Confidence 999999999999999999999974 2222212222222 22233322 12222333333 1122211111 36899999
Q ss_pred EEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhh---hc----CCCCcccccc----------CCHH
Q 016620 169 GVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---AN----GEQPVTWKRA----------SSMD 231 (386)
Q Consensus 169 gIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~---~~----~~~~~~~~~~----------~~l~ 231 (386)
+|+|+|.||+.+++.+ +++|++|+++|++...... ...++.... .. .....++... ..++
T Consensus 176 ~ViGaG~iG~~aa~~a-~~~Ga~V~~~d~~~~~~~~--~~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~~l~ 252 (384)
T 1l7d_A 176 LVFGVGVAGLQAIATA-KRLGAVVMATDVRAATKEQ--VESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAEAVL 252 (384)
T ss_dssp EEECCSHHHHHHHHHH-HHTTCEEEEECSCSTTHHH--HHHTTCEECCC-----------------------CCHHHHHH
T ss_pred EEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--HHHcCCeEEeecccccccccccccchhhcCHHHHhhhHHHHH
Confidence 9999999999999996 7999999999988653211 111110000 00 0000000000 1177
Q ss_pred HHhhhCCEEEEcc--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCccc
Q 016620 232 EVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVI 277 (386)
Q Consensus 232 ell~~aDiVvl~l--Plt~~t~~li~~~~~~~mk~gailIN~a--Rg~~v 277 (386)
+++..+|+|+.|+ |.+ .+..+++++.++.||+|+++||++ ||+.+
T Consensus 253 ~~~~~aDvVi~~~~~pg~-~~~~li~~~~l~~mk~g~vivdva~~~gg~~ 301 (384)
T 1l7d_A 253 KELVKTDIAITTALIPGK-PAPVLITEEMVTKMKPGSVIIDLAVEAGGNC 301 (384)
T ss_dssp HHHTTCSEEEECCCCTTS-CCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HHhCCCCEEEECCccCCC-CCCeeeCHHHHhcCCCCCEEEEEecCCCCCe
Confidence 8889999999888 443 245788999999999999999999 76643
No 49
>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1
Probab=99.61 E-value=1.6e-17 Score=166.29 Aligned_cols=218 Identities=14% Similarity=0.192 Sum_probs=155.7
Q ss_pred cEEEEccccccccChhHHh-----hCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccC-CCCCCcccc-
Q 016620 88 KAFSNMAVGYNNVDVNAAN-----KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYD-GWLPNLFVG- 160 (386)
Q Consensus 88 k~i~~~~~G~d~id~~~~~-----~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~-~w~~~~~~g- 160 (386)
+.+...|+|+|++++.+.. ++++.+++.+|. ..+++++.+..++.+.|++....... .+.|. .|......+
T Consensus 83 ~~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~-~~~~~~~~~~~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~ 160 (404)
T 1gpj_A 83 RHLFRVASGLESMMVGEQEILRQVKKAYDRAARLGT-LDEALKIVFRRAINLGKRAREETRIS-EGAVSIGSAAVELAER 160 (404)
T ss_dssp HHHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTC-CCHHHHHHHHHHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHH
T ss_pred hhheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCC-chHHHHHHHHHHhhhhccCcchhhhc-CCCccHHHHHHHHHHH
Confidence 7788889999999999887 889999999887 46899999999999999876543221 22221 000000001
Q ss_pred --cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 161 --NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 161 --~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
.++.|++|+|+|+|.||+.+++.+ +.+|+ +|+++||+.... ++.... .+.. .....++.+++..+
T Consensus 161 ~~~~l~g~~VlIiGaG~iG~~~a~~l-~~~G~~~V~v~~r~~~ra-~~la~~-------~g~~---~~~~~~l~~~l~~a 228 (404)
T 1gpj_A 161 ELGSLHDKTVLVVGAGEMGKTVAKSL-VDRGVRAVLVANRTYERA-VELARD-------LGGE---AVRFDELVDHLARS 228 (404)
T ss_dssp HHSCCTTCEEEEESCCHHHHHHHHHH-HHHCCSEEEEECSSHHHH-HHHHHH-------HTCE---ECCGGGHHHHHHTC
T ss_pred HhccccCCEEEEEChHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHH-------cCCc---eecHHhHHHHhcCC
Confidence 147999999999999999999997 68999 999999987542 111111 1111 11224688889999
Q ss_pred CEEEEccCCChhhhhcccHHHHhc--CC----CCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCC-CCCCCC
Q 016620 238 DVISLHPVLDKTTYHLINKERLAT--MK----KEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPY-MKPGLS 310 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~--mk----~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~-~~~~L~ 310 (386)
|+|+.|+|. +..+++.+.++. || ++.++||++ +|. .+++++
T Consensus 229 DvVi~at~~---~~~~~~~~~l~~~~lk~r~~~~~v~vdia-----------------------------~P~~i~~~l~ 276 (404)
T 1gpj_A 229 DVVVSATAA---PHPVIHVDDVREALRKRDRRSPILIIDIA-----------------------------NPRDVEEGVE 276 (404)
T ss_dssp SEEEECCSS---SSCCBCHHHHHHHHHHCSSCCCEEEEECC-----------------------------SSCSBCTTGG
T ss_pred CEEEEccCC---CCceecHHHHHHHHHhccCCCCEEEEEcc-----------------------------CCCCCCcccc
Confidence 999999874 456777777776 42 456777765 355 357899
Q ss_pred CCCCeEE--cCCCCCCcHHHHH----------HHHHHHHHHHHHHHcCCCCCC
Q 016620 311 EMKNAIV--VPHIASASKWTRE----------GMATLAALNVLGKIKGYPIWG 351 (386)
Q Consensus 311 ~~~nvil--TPHia~~t~~~~~----------~~~~~~~~ni~~~~~g~~~~~ 351 (386)
++|||++ |||+++.+.++.+ .+....++++..|+.+.+..+
T Consensus 277 ~l~~v~l~d~d~l~~~~~~~~~~r~~~~~~~~~li~q~~~~f~~w~~~~~~~~ 329 (404)
T 1gpj_A 277 NIEDVEVRTIDDLRVIARENLERRRKEIPKVEKLIEEELSTVEEELEKLKERR 329 (404)
T ss_dssp GSTTEEEEEHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeEEEeHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHH
Confidence 9999999 9999987776544 566667788888887755433
No 50
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=99.27 E-value=8.5e-12 Score=120.17 Aligned_cols=117 Identities=13% Similarity=0.063 Sum_probs=91.5
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
+...-++|||||+|.||..+|+.| ...|.+|++||++...... +...+ .....++++++++||+|
T Consensus 17 ~~~~m~~I~iIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~---------l~~~g-----~~~~~~~~~~~~~aDvv 81 (310)
T 3doj_A 17 RGSHMMEVGFLGLGIMGKAMSMNL-LKNGFKVTVWNRTLSKCDE---------LVEHG-----ASVCESPAEVIKKCKYT 81 (310)
T ss_dssp -CCCSCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGGHH---------HHHTT-----CEECSSHHHHHHHCSEE
T ss_pred ccccCCEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHHHH---------HHHCC-----CeEcCCHHHHHHhCCEE
Confidence 455668999999999999999998 4789999999998764221 11112 23357899999999999
Q ss_pred EEccCCChhhhhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 241 SLHPVLDKTTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 241 vl~lPlt~~t~~li--~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++|+|....+..++ .++.+..+++|.++||+++......+.+.+.+.+..+.
T Consensus 82 i~~vp~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 135 (310)
T 3doj_A 82 IAMLSDPCAALSVVFDKGGVLEQICEGKGYIDMSTVDAETSLKINEAITGKGGR 135 (310)
T ss_dssp EECCSSHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEEcCCHHHHHHHHhCchhhhhccCCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 99999766666665 24566789999999999999998889999988875443
No 51
>3obb_A Probable 3-hydroxyisobutyrate dehydrogenase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: EPE; 2.20A {Pseudomonas aeruginosa} PDB: 3q3c_A*
Probab=99.26 E-value=1.3e-11 Score=118.66 Aligned_cols=113 Identities=19% Similarity=0.220 Sum_probs=92.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++||+||+|.||..+|++|. .-|.+|++|||++....+ +...+ .....++.|+++.||+|++|+|
T Consensus 4 ~kIgfIGlG~MG~~mA~~L~-~~G~~v~v~dr~~~~~~~---------l~~~G-----a~~a~s~~e~~~~~dvv~~~l~ 68 (300)
T 3obb_A 4 KQIAFIGLGHMGAPMATNLL-KAGYLLNVFDLVQSAVDG---------LVAAG-----ASAARSARDAVQGADVVISMLP 68 (300)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSSHHHHHH---------HHHTT-----CEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEeeehHHHHHHHHHHH-hCCCeEEEEcCCHHHHHH---------HHHcC-----CEEcCCHHHHHhcCCceeecCC
Confidence 58999999999999999984 679999999998765321 11222 3346799999999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcce
Q 016620 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (386)
Q Consensus 246 lt~~t~~li~~--~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~g 293 (386)
..++.+.++.. ..++.+++|.++||+|....-+...+.+.+++..+..
T Consensus 69 ~~~~v~~V~~~~~g~~~~~~~g~iiId~sT~~p~~~~~~a~~~~~~G~~~ 118 (300)
T 3obb_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGLAM 118 (300)
T ss_dssp CHHHHHHHHHSSSSSTTSCCC-CEEEECSCCCHHHHHHHHHHHHTTTCEE
T ss_pred chHHHHHHHhchhhhhhcCCCCCEEEECCCCCHHHHHHHHHHHHHcCCEE
Confidence 98888877643 3788899999999999999999999999999875443
No 52
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=99.26 E-value=1.7e-10 Score=113.84 Aligned_cols=250 Identities=13% Similarity=0.140 Sum_probs=135.1
Q ss_pred eeCCCCCcEEEEeCCC-Cc-------hHHHHHHHhCCCeEEEecCCC--CCCCHHHHHHHhc-----CCCcEEEecCCcc
Q 016620 9 VWNPNGKYRVVSTKPM-PG-------TRWINLLIEQDCRVEICTQKK--TILSVEDIIALIG-----DKCDGVIGQLTED 73 (386)
Q Consensus 9 ~~~~~~~~~vlvt~~~-~~-------~~~~~~l~~~~~~~~~~~~~~--~~~~~~e~~~~~~-----~~ad~vi~~~~~~ 73 (386)
-..|-++|+|-+-+.. +. .+..+.|.+.|+++.+-.... ..++.++..+.=. +.+|.|+. ..++
T Consensus 16 ~~~~~~~m~IgvpkE~~~~E~RValtP~~v~~L~~~G~~V~VE~gaG~~~~f~D~~Y~~aGa~i~~~~~adiIlk-Vk~p 94 (381)
T 3p2y_A 16 TQGPGSMTLIGVPRESAEGERRVALVPKVVEKLSARGLEVVVESAAGAGALFSDADYERAGATIGDPWPADVVVK-VNPP 94 (381)
T ss_dssp ----CTTCEEEECCCCSTTCCCCSSCHHHHHHHHHTTCEEEECTTTTGGGTCCHHHHHHTTCEESCCTTSSEEEC-SSCC
T ss_pred ccCCCcceEEEEEecCCCCCceecCCHHHHHHHHhCCCEEEEeCCCCccCCCChHHHHHCCCEEeeeecCCEEEE-eCCC
Confidence 3456777777653221 11 234677888899887644432 3456666653211 12465543 3333
Q ss_pred ccHHHHHHhhccCCcEEEEc-cccccccChhHHhhCCcEEec---CCCCC-c------hhHHHHHHHHHHHHHhchHHHH
Q 016620 74 WGETLFAALSRAGGKAFSNM-AVGYNNVDVNAANKYGIAVGN---TPGVL-T------ETTAELAASLSLAAARRIVEAD 142 (386)
Q Consensus 74 ~~~~~l~~l~~l~~k~i~~~-~~G~d~id~~~~~~~gI~v~n---~~~~~-~------~~vAE~al~~~L~~~R~~~~~~ 142 (386)
+++.++.++. | +.+..+ --..|.=-++++.++||...- .+... + .++||.+=.+. ...+.
T Consensus 95 -~~~e~~~l~~-g-~~l~~~lh~~~~~~l~~~l~~~~it~ia~E~i~~~~~~~~l~~l~~~s~iAGy~A------v~~aa 165 (381)
T 3p2y_A 95 -TSDEISQLKP-G-SVLIGFLAPRTQPELASRLRIADVTAFAMESIPRISRAQTMDALSSQANVAGYKA------VLLGA 165 (381)
T ss_dssp -CHHHHTTSCT-T-CEEEECCCTTTCHHHHHHHHHTTCEEEEGGGCCSSGGGGGGCHHHHHHHHHHHHH------HHHHH
T ss_pred -ChhHHhhccC-C-CEEEEEeccccCHHHHHHHHHCCCeEEEeeccccccccccceeecchhHHHHHHH------HHHHH
Confidence 3455566665 3 344333 333333335677899988854 33211 1 22333322111 11100
Q ss_pred HHHHcCccCCCCCCcccc-cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh-----
Q 016620 143 EFMRAGLYDGWLPNLFVG-NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA----- 216 (386)
Q Consensus 143 ~~~~~~~~~~w~~~~~~g-~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~----- 216 (386)
+ .-+ ..++....+ ..+.+++|+|+|+|.||..+|+.+ +++|++|+++|++...... ...++.....
T Consensus 166 ~--~l~---~~~~~l~~~~~~v~~~kV~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l~~--~~~lGa~~~~l~~~~ 237 (381)
T 3p2y_A 166 S--LST---RFVPMLTTAAGTVKPASALVLGVGVAGLQALATA-KRLGAKTTGYDVRPEVAEQ--VRSVGAQWLDLGIDA 237 (381)
T ss_dssp H--HCS---SCSSCEECSSCEECCCEEEEESCSHHHHHHHHHH-HHHTCEEEEECSSGGGHHH--HHHTTCEECCCC---
T ss_pred H--Hhh---hhhhhhhcccCCcCCCEEEEECchHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--HHHcCCeEEeccccc
Confidence 0 001 111111111 247899999999999999999996 7999999999998754211 1111000000
Q ss_pred cCCCCc--------cccccCCHHHHhhhCCEEEEcc--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCccc
Q 016620 217 NGEQPV--------TWKRASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVI 277 (386)
Q Consensus 217 ~~~~~~--------~~~~~~~l~ell~~aDiVvl~l--Plt~~t~~li~~~~~~~mk~gailIN~a--Rg~~v 277 (386)
.+.... ......++++.++++|+|+.++ |. ..+..+++++.++.||+|+++||+| +|+.+
T Consensus 238 ~~~~gya~~~~~~~~~~~~~~l~e~l~~aDIVI~tv~iPg-~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 238 AGEGGYARELSEAERAQQQQALEDAITKFDIVITTALVPG-RPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp ----------CHHHHHHHHHHHHHHHTTCSEEEECCCCTT-SCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred cccccchhhhhHHHHhhhHHHHHHHHhcCCEEEECCCCCC-cccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 000000 0001236788999999999885 54 2356789999999999999999997 45443
No 53
>3l6d_A Putative oxidoreductase; structural genomics, protein structure initiative, oxidoredu PSI-2; HET: MSE; 1.90A {Pseudomonas putida}
Probab=99.25 E-value=2e-11 Score=117.40 Aligned_cols=117 Identities=15% Similarity=0.140 Sum_probs=92.7
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+...++|||||+|.||+.+|+.| ...|.+|++||++...... +...+ .....++++++++||+|
T Consensus 5 ~~~~~~~IgiIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g-----~~~~~~~~e~~~~aDvV 69 (306)
T 3l6d_A 5 DESFEFDVSVIGLGAMGTIMAQVL-LKQGKRVAIWNRSPGKAAA---------LVAAG-----AHLCESVKAALSASPAT 69 (306)
T ss_dssp CCCCSCSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSHHHHHH---------HHHHT-----CEECSSHHHHHHHSSEE
T ss_pred cccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHHCC-----CeecCCHHHHHhcCCEE
Confidence 356778999999999999999998 4789999999998764321 11112 22357899999999999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++|+|....+..++.++.+..+++|.++||++++.......+.+.+++..+.
T Consensus 70 i~~vp~~~~~~~v~~~~~l~~~~~g~ivid~st~~~~~~~~l~~~~~~~g~~ 121 (306)
T 3l6d_A 70 IFVLLDNHATHEVLGMPGVARALAHRTIVDYTTNAQDEGLALQGLVNQAGGH 121 (306)
T ss_dssp EECCSSHHHHHHHHTSTTHHHHTTTCEEEECCCCCTTHHHHHHHHHHHTTCE
T ss_pred EEEeCCHHHHHHHhcccchhhccCCCEEEECCCCCHHHHHHHHHHHHHcCCe
Confidence 9999987667777753345667899999999999999999999999875443
No 54
>4gbj_A 6-phosphogluconate dehydrogenase NAD-binding; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.05A {Dyadobacter fermentans}
Probab=99.24 E-value=1.6e-11 Score=117.75 Aligned_cols=120 Identities=13% Similarity=0.181 Sum_probs=92.8
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||..+|++|+ .-|.+|++|||++....+ +.. .+.....++.|+++.||+|++|+|
T Consensus 6 ~kIgfIGLG~MG~~mA~~L~-~~G~~V~v~dr~~~~~~~---------l~~-----~G~~~~~s~~e~~~~~dvvi~~l~ 70 (297)
T 4gbj_A 6 EKIAFLGLGNLGTPIAEILL-EAGYELVVWNRTASKAEP---------LTK-----LGATVVENAIDAITPGGIVFSVLA 70 (297)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEC-------CT---------TTT-----TTCEECSSGGGGCCTTCEEEECCS
T ss_pred CcEEEEecHHHHHHHHHHHH-HCCCeEEEEeCCHHHHHH---------HHH-----cCCeEeCCHHHHHhcCCceeeecc
Confidence 57999999999999999985 679999999998754211 111 223456789999999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~ 300 (386)
..+....++..+.+..++++.++||++....-....+.+.+++..+...-.=|..
T Consensus 71 ~~~~~~~v~~~~~~~~~~~~~iiid~sT~~p~~~~~~~~~~~~~g~~~ldapVsG 125 (297)
T 4gbj_A 71 DDAAVEELFSMELVEKLGKDGVHVSMSTISPETSRQLAQVHEWYGAHYVGAPIFA 125 (297)
T ss_dssp SHHHHHHHSCHHHHHHHCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEECCEEC
T ss_pred chhhHHHHHHHHHHhhcCCCeEEEECCCCChHHHHHHHHHHHhcCCceecCCcCC
Confidence 8888888888889999999999999999999999999999998765544333443
No 55
>3qsg_A NAD-binding phosphogluconate dehydrogenase-like P; structural genomics, PSI-biology, midwest center for structu genomics; 1.90A {Alicyclobacillus acidocaldarius subsp}
Probab=99.23 E-value=6.1e-11 Score=114.34 Aligned_cols=130 Identities=15% Similarity=0.079 Sum_probs=84.9
Q ss_pred HHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCCh-hhHHHHHHhhhhhhhhhcCCC
Q 016620 143 EFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKFVTAYGQFLKANGEQ 220 (386)
Q Consensus 143 ~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~-~~~~~~~~~~~~~~~~~~~~~ 220 (386)
...+.+.|.+|.+...+ .....++|||||+|.||..+|+.|+ ..|. +|++||++. ....+. +...+
T Consensus 3 ~~~~~~~~~~~~~~~~~-~~~~~~~I~iIG~G~mG~~~A~~L~-~~G~~~V~~~dr~~~~~~~~~--------~~~~g-- 70 (312)
T 3qsg_A 3 HHHHHSSGVDLGTENLY-FQSNAMKLGFIGFGEAASAIASGLR-QAGAIDMAAYDAASAESWRPR--------AEELG-- 70 (312)
T ss_dssp -----------------------CEEEEECCSHHHHHHHHHHH-HHSCCEEEEECSSCHHHHHHH--------HHHTT--
T ss_pred cccccccccccCccccc-ccCCCCEEEEECccHHHHHHHHHHH-HCCCCeEEEEcCCCCHHHHHH--------HHHCC--
Confidence 44566777555433222 2345679999999999999999984 6688 999999973 222221 11112
Q ss_pred CccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 221 PVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 221 ~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
.....++++++++||+|++|+|...... .+ .+....++++.++||+++.......++.+.+.+.
T Consensus 71 ---~~~~~~~~e~~~~aDvVi~~vp~~~~~~-~~-~~l~~~l~~~~ivvd~st~~~~~~~~~~~~~~~~ 134 (312)
T 3qsg_A 71 ---VSCKASVAEVAGECDVIFSLVTAQAALE-VA-QQAGPHLCEGALYADFTSCSPAVKRAIGDVISRH 134 (312)
T ss_dssp ---CEECSCHHHHHHHCSEEEECSCTTTHHH-HH-HHHGGGCCTTCEEEECCCCCHHHHHHHHHHHHHH
T ss_pred ---CEEeCCHHHHHhcCCEEEEecCchhHHH-HH-HhhHhhcCCCCEEEEcCCCCHHHHHHHHHHHHhh
Confidence 2235689999999999999999765544 33 6677889999999999999999999999988765
No 56
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=99.22 E-value=1.1e-10 Score=112.89 Aligned_cols=154 Identities=16% Similarity=0.105 Sum_probs=100.7
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHH-HhhhCC
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VLREAD 238 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-ll~~aD 238 (386)
.+..++|||||+|.||+++|+.| +..|. +|++||++...... ....+.. .....++++ ++++||
T Consensus 30 ~~~~~kI~IIG~G~mG~slA~~l-~~~G~~~~V~~~dr~~~~~~~---------a~~~G~~---~~~~~~~~~~~~~~aD 96 (314)
T 3ggo_A 30 SLSMQNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISK---------AVDLGII---DEGTTSIAKVEDFSPD 96 (314)
T ss_dssp CCSCSEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHH---------HHHTTSC---SEEESCTTGGGGGCCS
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCCCEEEEEECCHHHHHH---------HHHCCCc---chhcCCHHHHhhccCC
Confidence 34558999999999999999998 57788 99999998754221 1111211 112357788 899999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCC---CC-CCCCCCCCCC
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE---PY-MKPGLSEMKN 314 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~E---P~-~~~~L~~~~n 314 (386)
+|++|+|.. .+..++ ++....+++++++++++.......+++.+.+.. ++.+. -=++..| |. ....|++...
T Consensus 97 vVilavp~~-~~~~vl-~~l~~~l~~~~iv~d~~Svk~~~~~~~~~~l~~-~~v~~-hPm~G~e~sG~~~A~~~Lf~g~~ 172 (314)
T 3ggo_A 97 FVMLSSPVR-TFREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGK-RFVGG-HPIAGTEKSGVEYSLDNLYEGKK 172 (314)
T ss_dssp EEEECSCGG-GHHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGG-GEECE-EECCCCCCCSGGGCCTTTTTTCE
T ss_pred EEEEeCCHH-HHHHHH-HHHhhccCCCcEEEECCCCcHHHHHHHHHhcCC-CEEec-CcccCCcccchhhhhhhhhcCCE
Confidence 999999964 344444 567778999999999988765445666666643 21111 1122222 11 1135778888
Q ss_pred eEEcCCCCCCcHHHHHHHH
Q 016620 315 AIVVPHIASASKWTREGMA 333 (386)
Q Consensus 315 vilTPHia~~t~~~~~~~~ 333 (386)
+++||+- +.+.+..+.+.
T Consensus 173 ~il~~~~-~~~~~~~~~v~ 190 (314)
T 3ggo_A 173 VILTPTK-KTDKKRLKLVK 190 (314)
T ss_dssp EEECCCT-TSCHHHHHHHH
T ss_pred EEEEeCC-CCCHHHHHHHH
Confidence 9999983 34455444443
No 57
>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}
Probab=99.22 E-value=3.6e-11 Score=116.35 Aligned_cols=118 Identities=14% Similarity=0.114 Sum_probs=93.2
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
....++|||||+|.||+.+|+.| ...|.+|++||+++..... +...+ .....++++++++||+|+
T Consensus 28 ~~~~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~---------l~~~g-----~~~~~~~~e~~~~aDvVi 92 (320)
T 4dll_A 28 DPYARKITFLGTGSMGLPMARRL-CEAGYALQVWNRTPARAAS---------LAALG-----ATIHEQARAAARDADIVV 92 (320)
T ss_dssp -CCCSEEEEECCTTTHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHTTT-----CEEESSHHHHHTTCSEEE
T ss_pred ccCCCEEEEECccHHHHHHHHHH-HhCCCeEEEEcCCHHHHHH---------HHHCC-----CEeeCCHHHHHhcCCEEE
Confidence 34667999999999999999998 4789999999998764221 11111 234578999999999999
Q ss_pred EccCCChhhhhcccH-HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016620 242 LHPVLDKTTYHLINK-ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (386)
Q Consensus 242 l~lPlt~~t~~li~~-~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga 294 (386)
+|+|.......++.. +.+..+++|.++||++++.+...+.+.+.+++..+...
T Consensus 93 ~~vp~~~~~~~v~~~~~~~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~~~ 146 (320)
T 4dll_A 93 SMLENGAVVQDVLFAQGVAAAMKPGSLFLDMASITPREARDHAARLGALGIAHL 146 (320)
T ss_dssp ECCSSHHHHHHHHTTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred EECCCHHHHHHHHcchhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCEEE
Confidence 999976666766643 56778999999999999999999999999987655443
No 58
>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*
Probab=99.20 E-value=2.9e-10 Score=111.35 Aligned_cols=108 Identities=23% Similarity=0.304 Sum_probs=86.3
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-hCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (386)
++.|+||+|+|+|+||+.+|+++ ++||++|+++|++... .++.+.+ + . ...+.+++++ .||++
T Consensus 172 ~L~GktV~I~G~GnVG~~~A~~l-~~~GakVvvsD~~~~~--~~~a~~~-------g-----a-~~v~~~ell~~~~DIl 235 (355)
T 1c1d_A 172 SLDGLTVLVQGLGAVGGSLASLA-AEAGAQLLVADTDTER--VAHAVAL-------G-----H-TAVALEDVLSTPCDVF 235 (355)
T ss_dssp CSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH--HHHHHHT-------T-----C-EECCGGGGGGCCCSEE
T ss_pred CCCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEeCCccH--HHHHHhc-------C-----C-EEeChHHhhcCcccee
Confidence 69999999999999999999997 7999999999987543 2221111 1 1 1246678887 99999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
+-| .+.++|+++.++.|| ..+++|.+++++.++++ .++|+++.+.
T Consensus 236 iP~-----A~~~~I~~~~~~~lk-~~iVie~AN~p~t~~eA-~~~L~~~gIl 280 (355)
T 1c1d_A 236 APC-----AMGGVITTEVARTLD-CSVVAGAANNVIADEAA-SDILHARGIL 280 (355)
T ss_dssp EEC-----SCSCCBCHHHHHHCC-CSEECCSCTTCBCSHHH-HHHHHHTTCE
T ss_pred cHh-----HHHhhcCHHHHhhCC-CCEEEECCCCCCCCHHH-HHHHHhCCEE
Confidence 853 578999999999998 68999999999999777 5888887643
No 59
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=99.18 E-value=2e-10 Score=108.44 Aligned_cols=142 Identities=17% Similarity=0.144 Sum_probs=96.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiVvl 242 (386)
++|||||+|.||+.+|+.| ...|. +|++||++...... ....+.. .....+++++++ +||+|++
T Consensus 2 ~~I~iIG~G~mG~~~a~~l-~~~g~~~~V~~~d~~~~~~~~---------~~~~g~~---~~~~~~~~~~~~~~aDvVil 68 (281)
T 2g5c_A 2 QNVLIVGVGFMGGSFAKSL-RRSGFKGKIYGYDINPESISK---------AVDLGII---DEGTTSIAKVEDFSPDFVML 68 (281)
T ss_dssp CEEEEESCSHHHHHHHHHH-HHTTCCSEEEEECSCHHHHHH---------HHHTTSC---SEEESCGGGGGGTCCSEEEE
T ss_pred cEEEEEecCHHHHHHHHHH-HhcCCCcEEEEEeCCHHHHHH---------HHHCCCc---ccccCCHHHHhcCCCCEEEE
Confidence 4799999999999999998 46777 99999998654211 1111211 111357778888 9999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCC---CC-CCCCCCCCCeEEc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEP---YM-KPGLSEMKNAIVV 318 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP---~~-~~~L~~~~nvilT 318 (386)
|+|.. .+..++ .+....+++++++++++++.....+.+.+.+.++.+.+ .-++..|. .. ..+|++..+++++
T Consensus 69 avp~~-~~~~v~-~~l~~~l~~~~iv~~~~~~~~~~~~~l~~~l~~~~v~~--~p~~~~~~~gp~~a~~~l~~g~~~~~~ 144 (281)
T 2g5c_A 69 SSPVR-TFREIA-KKLSYILSEDATVTDQGSVKGKLVYDLENILGKRFVGG--HPIAGTEKSGVEYSLDNLYEGKKVILT 144 (281)
T ss_dssp CSCHH-HHHHHH-HHHHHHSCTTCEEEECCSCCTHHHHHHHHHHGGGEECE--EEECCCSCCSGGGCCSSTTTTCEEEEC
T ss_pred cCCHH-HHHHHH-HHHHhhCCCCcEEEECCCCcHHHHHHHHHhccccceee--ccccCCccCChhhhhhHHhCCCCEEEe
Confidence 99964 455555 34667789999999999988766677888886531111 12233232 11 2357777889999
Q ss_pred CCCCCC
Q 016620 319 PHIASA 324 (386)
Q Consensus 319 PHia~~ 324 (386)
||.++.
T Consensus 145 ~~~~~~ 150 (281)
T 2g5c_A 145 PTKKTD 150 (281)
T ss_dssp CCSSSC
T ss_pred cCCCCC
Confidence 996653
No 60
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=99.17 E-value=1.2e-10 Score=114.62 Aligned_cols=122 Identities=16% Similarity=0.275 Sum_probs=96.1
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC---CE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA---DV 239 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a---Di 239 (386)
+.+++|||||+|.||+.+|+.| ...|.+|.+||++...... +...+ .....+++|+++.+ |+
T Consensus 20 m~~mkIgiIGlG~mG~~~A~~L-~~~G~~V~v~dr~~~~~~~---------l~~~g-----~~~~~s~~e~~~~a~~~Dv 84 (358)
T 4e21_A 20 FQSMQIGMIGLGRMGADMVRRL-RKGGHECVVYDLNVNAVQA---------LEREG-----IAGARSIEEFCAKLVKPRV 84 (358)
T ss_dssp --CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHTTT-----CBCCSSHHHHHHHSCSSCE
T ss_pred hcCCEEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHHHH---------HHHCC-----CEEeCCHHHHHhcCCCCCE
Confidence 5678999999999999999998 4789999999998754221 11112 22356899999999 99
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCC
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~ 301 (386)
|++|+|.. .+..++ .+.+..+++|.++||++++...+...+.+.+++..+......|+..
T Consensus 85 Vi~~vp~~-~v~~vl-~~l~~~l~~g~iiId~st~~~~~~~~~~~~l~~~g~~~vdapVsGg 144 (358)
T 4e21_A 85 VWLMVPAA-VVDSML-QRMTPLLAANDIVIDGGNSHYQDDIRRADQMRAQGITYVDVGTSGG 144 (358)
T ss_dssp EEECSCGG-GHHHHH-HHHGGGCCTTCEEEECSSCCHHHHHHHHHHHHTTTCEEEEEEEECG
T ss_pred EEEeCCHH-HHHHHH-HHHHhhCCCCCEEEeCCCCChHHHHHHHHHHHHCCCEEEeCCCCCC
Confidence 99999976 666666 5678889999999999999999999999999887766555555443
No 61
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=99.17 E-value=5.1e-10 Score=106.30 Aligned_cols=155 Identities=14% Similarity=0.059 Sum_probs=104.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhh----hhhhhhhc-CCCC-------ccccccCCHHHH
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA----YGQFLKAN-GEQP-------VTWKRASSMDEV 233 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~----~~~~~~~~-~~~~-------~~~~~~~~l~el 233 (386)
++|+|||+|.||..+|+.++ ..|.+|++||++....... .+. +....... +... .......+++++
T Consensus 5 ~kV~VIGaG~mG~~iA~~la-~~G~~V~l~d~~~~~~~~~-~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~ 82 (283)
T 4e12_A 5 TNVTVLGTGVLGSQIAFQTA-FHGFAVTAYDINTDALDAA-KKRFEGLAAVYEKEVAGAADGAAQKALGGIRYSDDLAQA 82 (283)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSHHHHHHH-HHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEESCHHHH
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEeCCHHHHHHH-HHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEeCCHHHH
Confidence 68999999999999999984 7899999999987542211 110 00000000 0000 011234688899
Q ss_pred hhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCC
Q 016620 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK 313 (386)
Q Consensus 234 l~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~ 313 (386)
+++||+|+.|+|.+.+....+-++....+++++++++.+.+ +...+|.+++... -...++..+. |.+..+
T Consensus 83 ~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~s~tS~--~~~~~la~~~~~~-~~~ig~h~~~-------p~~~~~ 152 (283)
T 4e12_A 83 VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFATNSST--LLPSDLVGYTGRG-DKFLALHFAN-------HVWVNN 152 (283)
T ss_dssp TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHHHHSCG-GGEEEEEECS-------STTTSC
T ss_pred hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEEECCCC--CCHHHHHhhcCCC-cceEEEccCC-------CcccCc
Confidence 99999999999988777777777888889999999965544 3567788777543 3556666553 346678
Q ss_pred CeEEcCCCCCCcHHHHHHHH
Q 016620 314 NAIVVPHIASASKWTREGMA 333 (386)
Q Consensus 314 nvilTPHia~~t~~~~~~~~ 333 (386)
.+.++||- ..+.+..+...
T Consensus 153 lvevv~~~-~t~~~~~~~~~ 171 (283)
T 4e12_A 153 TAEVMGTT-KTDPEVYQQVV 171 (283)
T ss_dssp EEEEEECT-TSCHHHHHHHH
T ss_pred eEEEEeCC-CCCHHHHHHHH
Confidence 88999983 34555544443
No 62
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=99.15 E-value=7e-11 Score=112.24 Aligned_cols=112 Identities=19% Similarity=0.094 Sum_probs=89.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+|+.| ...|.+|++||++...... +...+ .....++++++++||+|++|+|
T Consensus 2 ~~i~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g-----~~~~~~~~~~~~~aDvvi~~vp 66 (287)
T 3pef_A 2 QKFGFIGLGIMGSAMAKNL-VKAGCSVTIWNRSPEKAEE---------LAALG-----AERAATPCEVVESCPVTFAMLA 66 (287)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSGGGGHH---------HHHTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HHCCCeEEEEcCCHHHHHH---------HHHCC-----CeecCCHHHHHhcCCEEEEEcC
Confidence 6899999999999999998 4789999999998764211 11111 2345789999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
.......++. ++.+..+++|.++||+++....+...+.+.+++..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~~~~vi~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pef_A 67 DPAAAEEVCFGKHGVLEGIGEGRGYVDMSTVDPATSQRIGVAVVAKGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEeCCCCCHHHHHHHHHHHHHhCCE
Confidence 7666666662 5567789999999999999999999999998876443
No 63
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=99.14 E-value=6.5e-11 Score=113.20 Aligned_cols=119 Identities=23% Similarity=0.258 Sum_probs=92.6
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
.++|||||+|.||+.+|+.| ...|.+|++||++...... +...+ .....+++++++ ||+|++|+
T Consensus 15 ~~~I~vIG~G~mG~~~A~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g-----~~~~~~~~~~~~-aDvvi~~v 78 (296)
T 3qha_A 15 QLKLGYIGLGNMGAPMATRM-TEWPGGVTVYDIRIEAMTP---------LAEAG-----ATLADSVADVAA-ADLIHITV 78 (296)
T ss_dssp CCCEEEECCSTTHHHHHHHH-TTSTTCEEEECSSTTTSHH---------HHHTT-----CEECSSHHHHTT-SSEEEECC
T ss_pred CCeEEEECcCHHHHHHHHHH-HHCCCeEEEEeCCHHHHHH---------HHHCC-----CEEcCCHHHHHh-CCEEEEEC
Confidence 36899999999999999998 5789999999998764211 11111 233578999999 99999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~ 300 (386)
|....+..++ ++....+++|.++||++++.....+.+.+.+.+..+......|+.
T Consensus 79 p~~~~~~~v~-~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~~~~~pv~g 133 (296)
T 3qha_A 79 LDDAQVREVV-GELAGHAKPGTVIAIHSTISDTTAVELARDLKARDIHIVDAPVSG 133 (296)
T ss_dssp SSHHHHHHHH-HHHHTTCCTTCEEEECSCCCHHHHHHHHHHHGGGTCEEEECCEES
T ss_pred CChHHHHHHH-HHHHHhcCCCCEEEEeCCCCHHHHHHHHHHHHHcCCEEEeCCCcC
Confidence 9766777776 678888999999999999999999999999987544433333443
No 64
>2pv7_A T-protein [includes: chorismate mutase (EC 5.4.99 and prephenate dehydrogenase (EC...; 1574749, chorismate mutase type II; HET: MSE TYR NAD; 2.00A {Haemophilus influenzae} SCOP: a.100.1.12 c.2.1.6
Probab=99.13 E-value=9.8e-11 Score=112.12 Aligned_cols=119 Identities=13% Similarity=0.165 Sum_probs=86.4
Q ss_pred CCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.++||||| +|.||+.+|+.| +..|.+|++||++.. .+.++.+++||+|++|
T Consensus 21 ~~~I~iIGg~G~mG~~la~~l-~~~G~~V~~~~~~~~---------------------------~~~~~~~~~aDvVila 72 (298)
T 2pv7_A 21 IHKIVIVGGYGKLGGLFARYL-RASGYPISILDREDW---------------------------AVAESILANADVVIVS 72 (298)
T ss_dssp CCCEEEETTTSHHHHHHHHHH-HTTTCCEEEECTTCG---------------------------GGHHHHHTTCSEEEEC
T ss_pred CCEEEEEcCCCHHHHHHHHHH-HhCCCeEEEEECCcc---------------------------cCHHHHhcCCCEEEEe
Confidence 56899999 999999999998 578999999997542 1456788999999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC--CCCCCCCCCeEEcCCC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM--KPGLSEMKNAIVVPHI 321 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~--~~~L~~~~nvilTPHi 321 (386)
+|.. .+..++ ++....++++++++++++......+++.+.+ + .++....|.. ..+++....+++|||-
T Consensus 73 vp~~-~~~~vl-~~l~~~l~~~~iv~~~~svk~~~~~~~~~~~--~------~~~v~~hP~~g~~~~~~~g~~~~l~~~~ 142 (298)
T 2pv7_A 73 VPIN-LTLETI-ERLKPYLTENMLLADLTSVKREPLAKMLEVH--T------GAVLGLHPMFGADIASMAKQVVVRCDGR 142 (298)
T ss_dssp SCGG-GHHHHH-HHHGGGCCTTSEEEECCSCCHHHHHHHHHHC--S------SEEEEEEECSCTTCSCCTTCEEEEEEEE
T ss_pred CCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCcHHHHHHHHhc--C------CCEEeeCCCCCCCchhhcCCeEEEecCC
Confidence 9964 356665 4456678999999999887654344444332 1 2344445642 2246666689999974
No 65
>3pdu_A 3-hydroxyisobutyrate dehydrogenase family protein; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R glyoxylate metabolism; HET: NAP; 1.89A {Geobacter sulfurreducens}
Probab=99.10 E-value=1.3e-10 Score=110.36 Aligned_cols=112 Identities=18% Similarity=0.106 Sum_probs=88.1
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||..+|+.|+ ..|.+|++|||++..... +...+ .....++++++++||+|++|+|
T Consensus 2 ~~I~iiG~G~mG~~~a~~l~-~~G~~V~~~dr~~~~~~~---------~~~~g-----~~~~~~~~~~~~~advvi~~v~ 66 (287)
T 3pdu_A 2 TTYGFLGLGIMGGPMAANLV-RAGFDVTVWNRNPAKCAP---------LVALG-----ARQASSPAEVCAACDITIAMLA 66 (287)
T ss_dssp CCEEEECCSTTHHHHHHHHH-HHTCCEEEECSSGGGGHH---------HHHHT-----CEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEccCHHHHHHHHHHH-HCCCeEEEEcCCHHHHHH---------HHHCC-----CeecCCHHHHHHcCCEEEEEcC
Confidence 47999999999999999984 678999999998764221 11111 2235689999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
....+..++. ++.+..+++|.++||++++.....+.+.+.+.+..+.
T Consensus 67 ~~~~~~~v~~~~~~l~~~l~~g~~vv~~st~~~~~~~~~~~~~~~~g~~ 115 (287)
T 3pdu_A 67 DPAAAREVCFGANGVLEGIGGGRGYIDMSTVDDETSTAIGAAVTARGGR 115 (287)
T ss_dssp SHHHHHHHHHSTTCGGGTCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred CHHHHHHHHcCchhhhhcccCCCEEEECCCCCHHHHHHHHHHHHHcCCE
Confidence 7666666652 4566789999999999999998889999988875443
No 66
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=99.10 E-value=8.2e-11 Score=112.77 Aligned_cols=114 Identities=19% Similarity=0.149 Sum_probs=88.2
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc-cCCHHHHhhhCCEEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR-ASSMDEVLREADVISL 242 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~ell~~aDiVvl 242 (386)
..++|||||+|.||..+|+.| ...|.+|++||++...... +...+. .. ..+++|++++||+|++
T Consensus 6 ~~~~I~iIG~G~mG~~~a~~l-~~~G~~V~~~dr~~~~~~~---------~~~~g~-----~~~~~~~~e~~~~aDvvi~ 70 (303)
T 3g0o_A 6 TDFHVGIVGLGSMGMGAARSC-LRAGLSTWGADLNPQACAN---------LLAEGA-----CGAAASAREFAGVVDALVI 70 (303)
T ss_dssp -CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHHTTC-----SEEESSSTTTTTTCSEEEE
T ss_pred CCCeEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHHHH---------HHHcCC-----ccccCCHHHHHhcCCEEEE
Confidence 346899999999999999998 4689999999998754221 111221 12 4678899999999999
Q ss_pred ccCCChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 243 HPVLDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 243 ~lPlt~~t~~li~--~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
|+|.......++. ++.+..+++|.++||+++......+.+.+.+.+..+.
T Consensus 71 ~vp~~~~~~~v~~~~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~~~~g~~ 122 (303)
T 3g0o_A 71 LVVNAAQVRQVLFGEDGVAHLMKPGSAVMVSSTISSADAQEIAAALTALNLN 122 (303)
T ss_dssp CCSSHHHHHHHHC--CCCGGGSCTTCEEEECSCCCHHHHHHHHHHHHTTTCE
T ss_pred ECCCHHHHHHHHhChhhHHhhCCCCCEEEecCCCCHHHHHHHHHHHHHcCCe
Confidence 9997666666653 4566789999999999999998889999998875443
No 67
>4gwg_A 6-phosphogluconate dehydrogenase, decarboxylating; 6-phosphoglyconate dehydrogenase, NADP, oxido; HET: MES; 1.39A {Homo sapiens} PDB: 4gwk_A* 2jkv_A* 2pgd_A 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A
Probab=99.10 E-value=2.7e-10 Score=116.12 Aligned_cols=125 Identities=15% Similarity=0.176 Sum_probs=95.8
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh---hCCEEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVIS 241 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~aDiVv 241 (386)
.++|||||+|.||+.+|+.| ...|.+|.+||++...... +...+..........+++|+++ .+|+|+
T Consensus 4 ~~kIgiIGlG~MG~~lA~~L-~~~G~~V~v~dr~~~~~~~---------l~~~g~~g~~i~~~~s~~e~v~~l~~aDvVi 73 (484)
T 4gwg_A 4 QADIALIGLAVMGQNLILNM-NDHGFVVCAFNRTVSKVDD---------FLANEAKGTKVVGAQSLKEMVSKLKKPRRII 73 (484)
T ss_dssp CBSEEEECCSHHHHHHHHHH-HHTTCCEEEECSSTHHHHH---------HHHTTTTTSSCEECSSHHHHHHTBCSSCEEE
T ss_pred CCEEEEEChhHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHhcccCCCceeccCCHHHHHhhccCCCEEE
Confidence 36899999999999999998 4789999999998765321 1111111112223468899887 499999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccC
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~ 300 (386)
+++|....+..++ ++....|++|.++||++++...+...+.+.+.+..+.....-|..
T Consensus 74 l~Vp~~~~v~~vl-~~l~~~L~~g~iIId~st~~~~~t~~~~~~l~~~Gi~fvd~pVsG 131 (484)
T 4gwg_A 74 LLVKAGQAVDDFI-EKLVPLLDTGDIIIDGGNSEYRDTTRRCRDLKAKGILFVGSGVSG 131 (484)
T ss_dssp ECSCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEEEEEEES
T ss_pred EecCChHHHHHHH-HHHHHhcCCCCEEEEcCCCCchHHHHHHHHHHhhccccccCCccC
Confidence 9999877777777 678889999999999999999999999999988766555444544
No 68
>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*
Probab=99.09 E-value=6.8e-10 Score=112.48 Aligned_cols=95 Identities=20% Similarity=0.323 Sum_probs=77.6
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.++.|++++|+|+|.||+.+|++| +++|++|+++|+++....... ..+ . ...++++++..+|+|
T Consensus 261 ~~L~GKtVvVtGaGgIG~aiA~~L-aa~GA~Viv~D~~~~~a~~Aa---------~~g-----~-dv~~lee~~~~aDvV 324 (488)
T 3ond_A 261 VMIAGKVAVVAGYGDVGKGCAAAL-KQAGARVIVTEIDPICALQAT---------MEG-----L-QVLTLEDVVSEADIF 324 (488)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHHHH---------HTT-----C-EECCGGGTTTTCSEE
T ss_pred CcccCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHHHHH---------HhC-----C-ccCCHHHHHHhcCEE
Confidence 469999999999999999999998 699999999999875432211 111 1 245788999999999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+.+. .+.++++.+.|+.||++++++|+|++.
T Consensus 325 i~at----G~~~vl~~e~l~~mk~gaiVvNaG~~~ 355 (488)
T 3ond_A 325 VTTT----GNKDIIMLDHMKKMKNNAIVCNIGHFD 355 (488)
T ss_dssp EECS----SCSCSBCHHHHTTSCTTEEEEESSSTT
T ss_pred EeCC----CChhhhhHHHHHhcCCCeEEEEcCCCC
Confidence 9765 457889999999999999999999984
No 69
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=99.09 E-value=2.7e-10 Score=110.15 Aligned_cols=123 Identities=16% Similarity=0.064 Sum_probs=89.4
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCC-cEEEEEcCChh--hHHHHHHhhhhhhhhhcCCCCccccccC-CHHHHhhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQA--TRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDEVLREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg-~~V~~~d~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ell~~aDiV 240 (386)
.++|||||+|.||..+|+.| ...| .+|++||++.. ...+...+. +...+. .. ++++++++||+|
T Consensus 24 ~m~IgvIG~G~mG~~lA~~L-~~~G~~~V~~~dr~~~~~~~~~~~~~~----~~~~g~-------~~~s~~e~~~~aDvV 91 (317)
T 4ezb_A 24 MTTIAFIGFGEAAQSIAGGL-GGRNAARLAAYDLRFNDPAASGALRAR----AAELGV-------EPLDDVAGIACADVV 91 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECGGGGCTTTHHHHHHH----HHHTTC-------EEESSGGGGGGCSEE
T ss_pred CCeEEEECccHHHHHHHHHH-HHcCCCeEEEEeCCCccccchHHHHHH----HHHCCC-------CCCCHHHHHhcCCEE
Confidence 36899999999999999998 4789 99999999862 000000000 111121 35 778899999999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFED 301 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~ 301 (386)
++|+|.......+ .+....++++.++||+++......+.+.+.+++..+.....-|+.+
T Consensus 92 i~avp~~~~~~~~--~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l~~~g~~~~d~pv~g~ 150 (317)
T 4ezb_A 92 LSLVVGAATKAVA--ASAAPHLSDEAVFIDLNSVGPDTKALAAGAIATGKGSFVEGAVMAR 150 (317)
T ss_dssp EECCCGGGHHHHH--HHHGGGCCTTCEEEECCSCCHHHHHHHHHHHHTSSCEEEEEEECSC
T ss_pred EEecCCHHHHHHH--HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEEeccCCCC
Confidence 9999976554443 6777889999999999999999999999999875443322234443
No 70
>2h78_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC6014, pseudomonas aeruginosa PA01, PSI-2, structural genomics; HET: PG4; 2.20A {Pseudomonas aeruginosa} PDB: 3cum_A 3obb_A* 3q3c_A*
Probab=99.07 E-value=4.1e-10 Score=107.52 Aligned_cols=111 Identities=20% Similarity=0.221 Sum_probs=88.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+|+.| ...|.+|++||++..... . +...+ .....++++++++||+|++|+|
T Consensus 4 ~~I~iiG~G~mG~~~a~~l-~~~G~~V~~~d~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~aDvvi~~vp 68 (302)
T 2h78_A 4 KQIAFIGLGHMGAPMATNL-LKAGYLLNVFDLVQSAVD-G--------LVAAG-----ASAARSARDAVQGADVVISMLP 68 (302)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSSHHHHH-H--------HHHTT-----CEECSSHHHHHTTCSEEEECCS
T ss_pred CEEEEEeecHHHHHHHHHH-HhCCCeEEEEcCCHHHHH-H--------HHHCC-----CeEcCCHHHHHhCCCeEEEECC
Confidence 6899999999999999998 478999999999875422 1 11112 2345789999999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016620 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 246 lt~~t~~li~~--~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 291 (386)
....+..++.. +.+..++++.++||++++.....+.+.+.+.+..+
T Consensus 69 ~~~~~~~v~~~~~~~~~~l~~~~~vi~~st~~~~~~~~l~~~~~~~g~ 116 (302)
T 2h78_A 69 ASQHVEGLYLDDDGLLAHIAPGTLVLECSTIAPTSARKIHAAARERGL 116 (302)
T ss_dssp CHHHHHHHHHSSSCGGGSSCSSCEEEECSCCCHHHHHHHHHHHHHTTC
T ss_pred CHHHHHHHHcCchhHHhcCCCCcEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 76666666642 56678999999999999999888899999886533
No 71
>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*
Probab=99.05 E-value=4.6e-10 Score=105.44 Aligned_cols=196 Identities=17% Similarity=0.118 Sum_probs=122.3
Q ss_pred HHHHHhCCCeEEEecCCCCCCCHHHHHHHhcC---CCcEEEecCCccccHHHHHHhhccCCcEEEEccccccccChhHHh
Q 016620 30 INLLIEQDCRVEICTQKKTILSVEDIIALIGD---KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (386)
Q Consensus 30 ~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~---~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~G~d~id~~~~~ 106 (386)
...+++.|.+..+... ..+++++.+.+.. .+.++.+. .++.++.+..++++ +.++....|+|.++.
T Consensus 21 ~~~~~~~g~~~~y~~~---~~~~~~l~~~i~~l~~~~~G~~vt--~P~k~~i~~~~~~l--~~~a~~~gavn~i~~---- 89 (263)
T 2d5c_A 21 AFALESLGLEGSYEAW---DTPLEALPGRLKEVRRAFRGVNLT--LPLKEAALAHLDWV--SPEAQRIGAVNTVLQ---- 89 (263)
T ss_dssp HHHHHHTTCCEEEEEE---ECCGGGHHHHHHHHHHHCSEEEEC--TTCTTGGGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHHcCCCCEEEEE---eCCHHHHHHHHHhccccCceEEEc--ccCHHHHHHHHHHH--hHHHHHhCCCCcEEc----
Confidence 4556777877655432 1244444443321 14444443 34556677777765 566667778888864
Q ss_pred hCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHh
Q 016620 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (386)
Q Consensus 107 ~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~ 186 (386)
+.|-. .|+++.. .+++.++.|. +.++.| +++|||+|.||+.+|+.| .
T Consensus 90 ~~g~~----~g~ntd~-----~g~~~~l~~~----------------------~~~l~~-~v~iiG~G~~g~~~a~~l-~ 136 (263)
T 2d5c_A 90 VEGRL----FGFNTDA-----PGFLEALKAG----------------------GIPLKG-PALVLGAGGAGRAVAFAL-R 136 (263)
T ss_dssp ETTEE----EEECCHH-----HHHHHHHHHT----------------------TCCCCS-CEEEECCSHHHHHHHHHH-H
T ss_pred cCCeE----EEeCCCH-----HHHHHHHHHh----------------------CCCCCC-eEEEECCcHHHHHHHHHH-H
Confidence 33422 3445443 2444443320 135889 999999999999999998 5
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCCh--hhhhcccHHHHhcCCC
Q 016620 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDK--TTYHLINKERLATMKK 264 (386)
Q Consensus 187 ~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~--~t~~li~~~~~~~mk~ 264 (386)
..|++|.++||+.... +...+.+ +. . ..+++++ +++|+|++|+|... ++...+. ...+++
T Consensus 137 ~~g~~v~v~~r~~~~~-~~l~~~~-------~~-----~-~~~~~~~-~~~Divi~~tp~~~~~~~~~~l~---~~~l~~ 198 (263)
T 2d5c_A 137 EAGLEVWVWNRTPQRA-LALAEEF-------GL-----R-AVPLEKA-REARLLVNATRVGLEDPSASPLP---AELFPE 198 (263)
T ss_dssp HTTCCEEEECSSHHHH-HHHHHHH-------TC-----E-ECCGGGG-GGCSEEEECSSTTTTCTTCCSSC---GGGSCS
T ss_pred HCCCEEEEEECCHHHH-HHHHHHh-------cc-----c-hhhHhhc-cCCCEEEEccCCCCCCCCCCCCC---HHHcCC
Confidence 7888999999986532 2111111 11 1 3477788 99999999999762 2224443 466899
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 265 EAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 265 gailIN~aRg~~vde~aL~~aL~~g 289 (386)
|++++|++.+.. +. .|.+++++.
T Consensus 199 g~~viD~~~~p~-~t-~l~~~a~~~ 221 (263)
T 2d5c_A 199 EGAAVDLVYRPL-WT-RFLREAKAK 221 (263)
T ss_dssp SSEEEESCCSSS-SC-HHHHHHHHT
T ss_pred CCEEEEeecCCc-cc-HHHHHHHHC
Confidence 999999998743 44 477777653
No 72
>3dtt_A NADP oxidoreductase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: NAP; 1.70A {Arthrobacter SP}
Probab=99.04 E-value=2.1e-10 Score=106.69 Aligned_cols=107 Identities=10% Similarity=0.153 Sum_probs=66.0
Q ss_pred cCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhH-------------HHHHHhhhhhhhhh
Q 016620 150 YDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATR-------------LEKFVTAYGQFLKA 216 (386)
Q Consensus 150 ~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~-------------~~~~~~~~~~~~~~ 216 (386)
|..|........++.+++|||||+|.||+.+|+.| ...|.+|++|||+.... ...+. ..
T Consensus 4 ~~~~~~~~~~~~~~~~~kIgiIG~G~mG~alA~~L-~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~-------~~ 75 (245)
T 3dtt_A 4 DKIHHHHHHENLYFQGMKIAVLGTGTVGRTMAGAL-ADLGHEVTIGTRDPKATLARAEPDAMGAPPFSQWL-------PE 75 (245)
T ss_dssp ---------------CCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHHTCC-------CCHHHHG-------GG
T ss_pred ccccccccccccccCCCeEEEECCCHHHHHHHHHH-HHCCCEEEEEeCChhhhhhhhhhhhhcchhhhHHH-------hh
Confidence 43444444456789999999999999999999998 47899999999987641 11110 01
Q ss_pred cCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHH-HhcCCCCcEEEEcC
Q 016620 217 NGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCS 272 (386)
Q Consensus 217 ~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~-~~~mk~gailIN~a 272 (386)
.+ .....+++|++++||+|++|+|..... ..+. +. ...+ ++.++|+++
T Consensus 76 ~~-----~~~~~~~~e~~~~aDvVilavp~~~~~-~~~~-~i~~~~l-~g~ivi~~s 124 (245)
T 3dtt_A 76 HP-----HVHLAAFADVAAGAELVVNATEGASSI-AALT-AAGAENL-AGKILVDIA 124 (245)
T ss_dssp ST-----TCEEEEHHHHHHHCSEEEECSCGGGHH-HHHH-HHCHHHH-TTSEEEECC
T ss_pred cC-----ceeccCHHHHHhcCCEEEEccCcHHHH-HHHH-Hhhhhhc-CCCEEEECC
Confidence 11 123468899999999999999965433 3322 22 2334 799999999
No 73
>1np3_A Ketol-acid reductoisomerase; A DEEP figure-OF-eight knot, C-terminal alpha-helical domain oxidoreductase; 2.00A {Pseudomonas aeruginosa} SCOP: a.100.1.2 c.2.1.6
Probab=99.02 E-value=1.8e-10 Score=112.42 Aligned_cols=136 Identities=21% Similarity=0.199 Sum_probs=92.3
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
..+.+++|||||+|.||+++|+.| +..|++|++++++.....+. ....+. ... ++++++++||+|
T Consensus 12 ~~l~~~~I~IIG~G~mG~alA~~L-~~~G~~V~~~~~~~~~~~~~--------a~~~G~-----~~~-~~~e~~~~aDvV 76 (338)
T 1np3_A 12 SIIQGKKVAIIGYGSQGHAHACNL-KDSGVDVTVGLRSGSATVAK--------AEAHGL-----KVA-DVKTAVAAADVV 76 (338)
T ss_dssp HHHHTSCEEEECCSHHHHHHHHHH-HHTTCCEEEECCTTCHHHHH--------HHHTTC-----EEE-CHHHHHHTCSEE
T ss_pred chhcCCEEEEECchHHHHHHHHHH-HHCcCEEEEEECChHHHHHH--------HHHCCC-----EEc-cHHHHHhcCCEE
Confidence 458899999999999999999998 57899999999976442221 111121 122 788999999999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc-eEEeeccCCCCCCC-C---CCCC---C
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF-RVGLDVFEDEPYMK-P---GLSE---M 312 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~-gaalDV~~~EP~~~-~---~L~~---~ 312 (386)
++|+|... ...++.++....+++|+++++++ | ++. .. +.+. ...+||+..+|... . .+++ -
T Consensus 77 ilavp~~~-~~~v~~~~i~~~l~~~~ivi~~~-g--v~~--~~-----~~~~~~~~~~vv~~~P~gp~~a~~~l~~~G~g 145 (338)
T 1np3_A 77 MILTPDEF-QGRLYKEEIEPNLKKGATLAFAH-G--FSI--HY-----NQVVPRADLDVIMIAPKAPGHTVRSEFVKGGG 145 (338)
T ss_dssp EECSCHHH-HHHHHHHHTGGGCCTTCEEEESC-C--HHH--HT-----TSSCCCTTCEEEEEEESSCSHHHHHHHHTTCC
T ss_pred EEeCCcHH-HHHHHHHHHHhhCCCCCEEEEcC-C--chh--HH-----HhhcCCCCcEEEeccCCCCchhHHHHHhccCC
Confidence 99999643 35555446667899999999874 3 222 11 2222 34467777677422 1 2444 5
Q ss_pred CCeEEcCCCC
Q 016620 313 KNAIVVPHIA 322 (386)
Q Consensus 313 ~nvilTPHia 322 (386)
.++++|||-.
T Consensus 146 ~~~ii~~~~~ 155 (338)
T 1np3_A 146 IPDLIAIYQD 155 (338)
T ss_dssp CCEEEEEEEC
T ss_pred CeEEEEecCC
Confidence 6788999854
No 74
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=99.01 E-value=5.8e-10 Score=110.77 Aligned_cols=113 Identities=20% Similarity=0.267 Sum_probs=78.5
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh-------cCCCCcccc---------
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-------NGEQPVTWK--------- 225 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~--------- 225 (386)
.+.+.+|+|+|+|.||..+|+.+ +++|++|++||++...... ...++...-. .+.....+.
T Consensus 187 ~v~~~kV~ViG~G~iG~~aa~~a-~~lGa~V~v~D~~~~~l~~--~~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~ 263 (405)
T 4dio_A 187 TVPAAKIFVMGAGVAGLQAIATA-RRLGAVVSATDVRPAAKEQ--VASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQV 263 (405)
T ss_dssp EECCCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSTTHHHH--HHHTTCEECCCCC-----------------CHHHH
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCEEEEEcCCHHHHHH--HHHcCCceeecccccccccccccchhhhcchhhhh
Confidence 47899999999999999999996 7999999999998754211 1111100000 000000000
Q ss_pred -ccCCHHHHhhhCCEEEEcc--CCChhhhhcccHHHHhcCCCCcEEEEcC--CCcccC
Q 016620 226 -RASSMDEVLREADVISLHP--VLDKTTYHLINKERLATMKKEAILVNCS--RGPVID 278 (386)
Q Consensus 226 -~~~~l~ell~~aDiVvl~l--Plt~~t~~li~~~~~~~mk~gailIN~a--Rg~~vd 278 (386)
...++++.+++||+|+.++ |.. .+..+++++.++.||+|+++||+| +|+.++
T Consensus 264 ~~~~~l~e~l~~aDVVI~tvlipg~-~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~e 320 (405)
T 4dio_A 264 KQAALVAEHIAKQDIVITTALIPGR-PAPRLVTREMLDSMKPGSVVVDLAVERGGNIE 320 (405)
T ss_dssp HHHHHHHHHHHTCSEEEECCCCSSS-CCCCCBCHHHHTTSCTTCEEEETTGGGTCSBT
T ss_pred hhHhHHHHHhcCCCEEEECCcCCCC-CCCEEecHHHHhcCCCCCEEEEEeCCCCCCcc
Confidence 0136789999999999885 543 457889999999999999999998 666554
No 75
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=99.00 E-value=2e-09 Score=102.08 Aligned_cols=143 Identities=20% Similarity=0.146 Sum_probs=94.7
Q ss_pred CeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|||||+|.||+.+|+.|++ ++|.+|++||++...... +...+.. .....++++++++||+|++|+
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~---------~~~~g~~---~~~~~~~~~~~~~aDvVilav 74 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDI---------ALERGIV---DEATADFKVFAALADVIILAV 74 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHH---------HHHTTSC---SEEESCTTTTGGGCSEEEECS
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHH---------HHHcCCc---ccccCCHHHhhcCCCEEEEcC
Confidence 689999999999999998854 347899999998654211 1111211 012356778889999999999
Q ss_pred CCChhhhhcccHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEee---ccCC---CCCC-CCCCCCCCCeE
Q 016620 245 VLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD---VFED---EPYM-KPGLSEMKNAI 316 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~-mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalD---V~~~---EP~~-~~~L~~~~nvi 316 (386)
|... ...++ .+.... +++++++++++++.....+.+.+.+.+..+. .++ ++.. .|.. ...+++..+++
T Consensus 75 p~~~-~~~v~-~~l~~~~l~~~~ivi~~~~~~~~~~~~l~~~l~~~~~~--~v~~~P~~g~~~~g~~~a~~~l~~g~~~~ 150 (290)
T 3b1f_A 75 PIKK-TIDFI-KILADLDLKEDVIITDAGSTKYEIVRAAEYYLKDKPVQ--FVGSHPMAGSHKSGAVAANVNLFENAYYI 150 (290)
T ss_dssp CHHH-HHHHH-HHHHTSCCCTTCEEECCCSCHHHHHHHHHHHHTTSSCE--EEEEEEC-----CCTTSCCTTTTTTSEEE
T ss_pred CHHH-HHHHH-HHHHhcCCCCCCEEEECCCCchHHHHHHHHhccccCCE--EEEeCCcCCCCcchHHHhhHHHhCCCeEE
Confidence 9533 34454 345667 8999999999988776667888877651121 122 1111 1221 13577777899
Q ss_pred EcCCCCCC
Q 016620 317 VVPHIASA 324 (386)
Q Consensus 317 lTPHia~~ 324 (386)
++||.++.
T Consensus 151 ~~~~~~~~ 158 (290)
T 3b1f_A 151 FSPSCLTK 158 (290)
T ss_dssp EEECTTCC
T ss_pred EecCCCCC
Confidence 99987553
No 76
>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A
Probab=98.97 E-value=1.3e-09 Score=103.19 Aligned_cols=195 Identities=16% Similarity=0.175 Sum_probs=115.4
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhcC----CCcEEEecCCccccHHHHHHhhccCCcEEEEccccccccChhHHh
Q 016620 31 NLLIEQDCRVEICTQKKTILSVEDIIALIGD----KCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAAN 106 (386)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~----~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~G~d~id~~~~~ 106 (386)
..+++.|.+..+.... .+++++.+.+.. +++++.+.. +..++.+..+..+ .-.+....++|.++.
T Consensus 33 ~~~~~~g~~~~y~~~~---~~~~~l~~~i~~l~~~~~~G~nvti--P~k~~i~~~ld~l--~~~A~~~gavnti~~---- 101 (275)
T 2hk9_A 33 ALIRYAGLNAVYLAFE---INPEELKKAFEGFKALKVKGINVTV--PFKEEIIPLLDYV--EDTAKEIGAVNTVKF---- 101 (275)
T ss_dssp HHHHHHTCSEEEEEEE---CCGGGHHHHHHHHHHHTCCEEEECT--TSTTTTGGGCSEE--CHHHHHHTCCCEEEE----
T ss_pred HHHHHcCCCcEEEEEE---CCHHHHHHHHHHHHhCCCCEEEECc--cCHHHHHHHHHHh--hHHHHHhCCcceEEe----
Confidence 4566667666543332 234444443321 467776653 3345555555554 444444556666643
Q ss_pred hCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHh
Q 016620 107 KYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVE 186 (386)
Q Consensus 107 ~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~ 186 (386)
+.|-. .|+|+... +++.++.| . +.++.|++++|||.|.+|+++|+.| .
T Consensus 102 ~~g~~----~g~nTd~~-----G~~~~l~~----------~------------~~~~~~~~v~iiGaG~~g~aia~~L-~ 149 (275)
T 2hk9_A 102 ENGKA----YGYNTDWI-----GFLKSLKS----------L------------IPEVKEKSILVLGAGGASRAVIYAL-V 149 (275)
T ss_dssp ETTEE----EEECCHHH-----HHHHHHHH----------H------------CTTGGGSEEEEECCSHHHHHHHHHH-H
T ss_pred eCCEE----EeecCCHH-----HHHHHHHH----------h------------CCCcCCCEEEEECchHHHHHHHHHH-H
Confidence 33422 24444332 33333322 0 1357889999999999999999998 4
Q ss_pred cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChh--hhhcccHHHHhcCCC
Q 016620 187 GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT--TYHLINKERLATMKK 264 (386)
Q Consensus 187 ~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~--t~~li~~~~~~~mk~ 264 (386)
..|++|+++||+.... ++.. +. .+ .....+++++++++|+|++|+|.... +...++ +..+++
T Consensus 150 ~~g~~V~v~~r~~~~~-~~l~-------~~---~g--~~~~~~~~~~~~~aDiVi~atp~~~~~~~~~~i~---~~~l~~ 213 (275)
T 2hk9_A 150 KEGAKVFLWNRTKEKA-IKLA-------QK---FP--LEVVNSPEEVIDKVQVIVNTTSVGLKDEDPEIFN---YDLIKK 213 (275)
T ss_dssp HHTCEEEEECSSHHHH-HHHT-------TT---SC--EEECSCGGGTGGGCSEEEECSSTTSSTTCCCSSC---GGGCCT
T ss_pred HcCCEEEEEECCHHHH-HHHH-------HH---cC--CeeehhHHhhhcCCCEEEEeCCCCCCCCCCCCCC---HHHcCC
Confidence 6788999999986542 1110 01 11 12233788889999999999997542 223443 456899
Q ss_pred CcEEEEcCCCcccCHHHHHHHHHc
Q 016620 265 EAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 265 gailIN~aRg~~vde~aL~~aL~~ 288 (386)
|.+++|++. .. ..+.+..++
T Consensus 214 g~~viDv~~---~~-t~ll~~a~~ 233 (275)
T 2hk9_A 214 DHVVVDIIY---KE-TKLLKKAKE 233 (275)
T ss_dssp TSEEEESSS---SC-CHHHHHHHH
T ss_pred CCEEEEcCC---Ch-HHHHHHHHH
Confidence 999999988 33 334444443
No 77
>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6
Probab=98.95 E-value=1.7e-09 Score=102.90 Aligned_cols=109 Identities=18% Similarity=0.203 Sum_probs=85.1
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|+|||+|.||+.+|+.| ...|.+|.+||++..... . +...+ .....+++++++++|+|++|+|
T Consensus 6 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~~D~vi~~v~ 70 (299)
T 1vpd_A 6 MKVGFIGLGIMGKPMSKNL-LKAGYSLVVSDRNPEAIA-D--------VIAAG-----AETASTAKAIAEQCDVIITMLP 70 (299)
T ss_dssp CEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHH-H--------HHHTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred ceEEEECchHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-H--------HHHCC-----CeecCCHHHHHhCCCEEEEECC
Confidence 4899999999999999998 467899999999865421 1 11111 2234688899999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
....+..++. ++....+++|.++|+++.|...+.+.|.+.+.+.
T Consensus 71 ~~~~~~~~~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 116 (299)
T 1vpd_A 71 NSPHVKEVALGENGIIEGAKPGTVLIDMSSIAPLASREISDALKAK 116 (299)
T ss_dssp SHHHHHHHHHSTTCHHHHCCTTCEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 7666666663 3456778999999999999887788899988764
No 78
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=98.93 E-value=3e-09 Score=101.21 Aligned_cols=109 Identities=17% Similarity=0.213 Sum_probs=85.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+|+.| ...|.+|++||++..... . +...+ .....++++++.++|+|++|+|
T Consensus 5 ~~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~~D~vi~~vp 69 (301)
T 3cky_A 5 IKIGFIGLGAMGKPMAINL-LKEGVTVYAFDLMEANVA-A--------VVAQG-----AQACENNQKVAAASDIIFTSLP 69 (301)
T ss_dssp CEEEEECCCTTHHHHHHHH-HHTTCEEEEECSSHHHHH-H--------HHTTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CEEEEECccHHHHHHHHHH-HHCCCeEEEEeCCHHHHH-H--------HHHCC-----CeecCCHHHHHhCCCEEEEECC
Confidence 5899999999999999998 467899999999865421 1 11111 2234688999999999999999
Q ss_pred CChhhhhccc--HHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 246 LDKTTYHLIN--KERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 246 lt~~t~~li~--~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
....+..++. ++....++++.++|++++|...+.+.|.+.+.+.
T Consensus 70 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~~~~~~~~~~~l~~~~~~~ 115 (301)
T 3cky_A 70 NAGIVETVMNGPGGVLSACKAGTVIVDMSSVSPSSTLKMAKVAAEK 115 (301)
T ss_dssp SHHHHHHHHHSTTCHHHHSCTTCEEEECCCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCcchHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 7666777764 3566778999999999999877788898888764
No 79
>3ktd_A Prephenate dehydrogenase; structural genomics, joint center F structural genomics, JCSG, protein structure initiative; 2.60A {Corynebacterium glutamicum atcc 13032}
Probab=98.91 E-value=1.3e-09 Score=106.36 Aligned_cols=132 Identities=14% Similarity=0.128 Sum_probs=87.0
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh----CCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE----ADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~----aDiV 240 (386)
-++|||||+|.||+++|+.| +..|.+|++||++...... ....+. ....++++++++ ||+|
T Consensus 8 ~~kIgIIG~G~mG~slA~~L-~~~G~~V~~~dr~~~~~~~---------a~~~G~-----~~~~~~~e~~~~a~~~aDlV 72 (341)
T 3ktd_A 8 SRPVCILGLGLIGGSLLRDL-HAANHSVFGYNRSRSGAKS---------AVDEGF-----DVSADLEATLQRAAAEDALI 72 (341)
T ss_dssp SSCEEEECCSHHHHHHHHHH-HHTTCCEEEECSCHHHHHH---------HHHTTC-----CEESCHHHHHHHHHHTTCEE
T ss_pred CCEEEEEeecHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHHcCC-----eeeCCHHHHHHhcccCCCEE
Confidence 35799999999999999998 5789999999998754321 111221 224678888765 6999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCC----------CCCCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYM----------KPGLS 310 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~----------~~~L~ 310 (386)
++|+|. ..+..++ ++ +..++++++++|++..+..-.+++.+.+. ...+....|.. ...|+
T Consensus 73 ilavP~-~~~~~vl-~~-l~~~~~~~iv~Dv~Svk~~i~~~~~~~~~-------~~~~v~~HPmaG~e~sG~~aa~~~Lf 142 (341)
T 3ktd_A 73 VLAVPM-TAIDSLL-DA-VHTHAPNNGFTDVVSVKTAVYDAVKARNM-------QHRYVGSHPMAGTANSGWSASMDGLF 142 (341)
T ss_dssp EECSCH-HHHHHHH-HH-HHHHCTTCCEEECCSCSHHHHHHHHHTTC-------GGGEECEEECCSCC-CCGGGCCSSTT
T ss_pred EEeCCH-HHHHHHH-HH-HHccCCCCEEEEcCCCChHHHHHHHHhCC-------CCcEecCCccccccccchhhhhhHHh
Confidence 999995 4566665 33 34458999999998765422223332221 12222334432 13578
Q ss_pred CCCCeEEcCCC
Q 016620 311 EMKNAIVVPHI 321 (386)
Q Consensus 311 ~~~nvilTPHi 321 (386)
+..++++||+-
T Consensus 143 ~g~~~iltp~~ 153 (341)
T 3ktd_A 143 KRAVWVVTFDQ 153 (341)
T ss_dssp TTCEEEECCGG
T ss_pred cCCeEEEEeCC
Confidence 87889999974
No 80
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=98.90 E-value=9.7e-09 Score=96.66 Aligned_cols=145 Identities=12% Similarity=0.050 Sum_probs=91.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|+|||+|.||+.+|+.| ...|.+|++||++...... +...+.. .....+++++ .++|+|++|+|
T Consensus 1 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~~~~~~~~~---------~~~~g~~---~~~~~~~~~~-~~~D~vi~av~ 66 (279)
T 2f1k_A 1 MKIGVVGLGLIGASLAGDL-RRRGHYLIGVSRQQSTCEK---------AVERQLV---DEAGQDLSLL-QTAKIIFLCTP 66 (279)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHHHHH---------HHHTTSC---SEEESCGGGG-TTCSEEEECSC
T ss_pred CEEEEEcCcHHHHHHHHHH-HHCCCEEEEEECCHHHHHH---------HHhCCCC---ccccCCHHHh-CCCCEEEEECC
Confidence 4799999999999999998 4678999999998654211 1111211 0123577888 89999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCC---CCC-CCCCCCCCCeEEcCCC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDE---PYM-KPGLSEMKNAIVVPHI 321 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~E---P~~-~~~L~~~~nvilTPHi 321 (386)
. ..+..++ .+....+++++++|+++.......+.+.+.+. ++.+. .-++..+ |.. ...++..+.++++|+-
T Consensus 67 ~-~~~~~~~-~~l~~~~~~~~~vv~~~~~~~~~~~~~~~~~~--~~~~~-~p~~g~~~~gp~~a~~~~~~g~~~~~~~~~ 141 (279)
T 2f1k_A 67 I-QLILPTL-EKLIPHLSPTAIVTDVASVKTAIAEPASQLWS--GFIGG-HPMAGTAAQGIDGAEENLFVNAPYVLTPTE 141 (279)
T ss_dssp H-HHHHHHH-HHHGGGSCTTCEEEECCSCCHHHHHHHHHHST--TCEEE-EECCCCSCSSGGGCCTTTTTTCEEEEEECT
T ss_pred H-HHHHHHH-HHHHhhCCCCCEEEECCCCcHHHHHHHHHHhC--CEeec-CcccCCccCCHHHHhHHHhCCCcEEEecCC
Confidence 4 3445554 45667789999999998766655555555432 22221 1222111 111 1245666678999975
Q ss_pred CCCcHHHHH
Q 016620 322 ASASKWTRE 330 (386)
Q Consensus 322 a~~t~~~~~ 330 (386)
++ +.+..+
T Consensus 142 ~~-~~~~~~ 149 (279)
T 2f1k_A 142 YT-DPEQLA 149 (279)
T ss_dssp TC-CHHHHH
T ss_pred CC-CHHHHH
Confidence 43 444333
No 81
>2zyd_A 6-phosphogluconate dehydrogenase, decarboxylating; NADP, pentose phosphate pathway, oxidoreductase, 6-phosphogl dehydrogenase; HET: GLO; 1.50A {Escherichia coli} PDB: 2zya_A* 3fwn_A* 2zyg_A 2w8z_A* 2w90_A*
Probab=98.90 E-value=7.8e-09 Score=105.43 Aligned_cols=118 Identities=14% Similarity=0.126 Sum_probs=89.8
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh---CCE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADV 239 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDi 239 (386)
...++|||||+|.||+.+|+.|+ ..|.+|.+|||+..... ...+ ... ..+.....+++++++. +|+
T Consensus 13 ~~~~~IgvIGlG~MG~~lA~~La-~~G~~V~v~~r~~~~~~-~l~~-------~~~--~~gi~~~~s~~e~v~~l~~aDv 81 (480)
T 2zyd_A 13 MSKQQIGVVGMAVMGRNLALNIE-SRGYTVSIFNRSREKTE-EVIA-------ENP--GKKLVPYYTVKEFVESLETPRR 81 (480)
T ss_dssp --CBSEEEECCSHHHHHHHHHHH-TTTCCEEEECSSHHHHH-HHHH-------HST--TSCEEECSSHHHHHHTBCSSCE
T ss_pred cCCCeEEEEccHHHHHHHHHHHH-hCCCeEEEEeCCHHHHH-HHHh-------hCC--CCCeEEeCCHHHHHhCCCCCCE
Confidence 56678999999999999999984 67999999999875432 1111 110 0123335689998887 999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
|++++|....+..++ ++....+++|.++||++.|...+...+.+.+.+..+.
T Consensus 82 Vil~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~g~~~~t~~l~~~l~~~g~~ 133 (480)
T 2zyd_A 82 ILLMVKAGAGTDAAI-DSLKPYLDKGDIIIDGGNTFFQDTIRRNRELSAEGFN 133 (480)
T ss_dssp EEECSCSSSHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EEEECCCHHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHCCCC
Confidence 999999877778877 4677889999999999999988888898888765443
No 82
>2gf2_A Hibadh, 3-hydroxyisobutyrate dehydrogenase; structural genomics, structural genomics consortium, SGC, oxidoreductase; 2.38A {Homo sapiens} PDB: 2i9p_A*
Probab=98.89 E-value=3.1e-09 Score=100.86 Aligned_cols=108 Identities=22% Similarity=0.279 Sum_probs=81.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+|+.| ...|.+|++||++..... . +...+ .....+++++++++|+|++|+|
T Consensus 1 m~i~iiG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~~Dvvi~~vp 65 (296)
T 2gf2_A 1 MPVGFIGLGNMGNPMAKNL-MKHGYPLIIYDVFPDACK-E--------FQDAG-----EQVVSSPADVAEKADRIITMLP 65 (296)
T ss_dssp CCEEEECCSTTHHHHHHHH-HHTTCCEEEECSSTHHHH-H--------HHTTT-----CEECSSHHHHHHHCSEEEECCS
T ss_pred CeEEEEeccHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-H--------HHHcC-----CeecCCHHHHHhcCCEEEEeCC
Confidence 4799999999999999998 467899999999865421 1 11111 2234688999999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 246 lt~~t~~li~~--~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
....+..++.. ..++.++++.++|+++....-+.+.+.+.+.+
T Consensus 66 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~~~~~~~~ 110 (296)
T 2gf2_A 66 TSINAIEAYSGANGILKKVKKGSLLIDSSTIDPAVSKELAKEVEK 110 (296)
T ss_dssp SHHHHHHHHHSTTSGGGTCCTTCEEEECSCCCHHHHHHHHHHHHH
T ss_pred CHHHHHHHHhCchhHHhcCCCCCEEEECCCCCHHHHHHHHHHHHH
Confidence 76666666543 24567899999999888777666777777764
No 83
>1yb4_A Tartronic semialdehyde reductase; structural genomics, oxidoreductase, salmonella typhimurium LT2, PSI, protein ST initiative; 2.40A {Salmonella typhimurium}
Probab=98.85 E-value=2.2e-09 Score=101.71 Aligned_cols=108 Identities=17% Similarity=0.134 Sum_probs=82.8
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+|+.| ...|.+|++|| +.... +. +...+ .....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~~G~~~a~~l-~~~g~~V~~~~-~~~~~-~~--------~~~~g-----~~~~~~~~~~~~~~D~vi~~vp 67 (295)
T 1yb4_A 4 MKLGFIGLGIMGSPMAINL-ARAGHQLHVTT-IGPVA-DE--------LLSLG-----AVNVETARQVTEFADIIFIMVP 67 (295)
T ss_dssp CEEEECCCSTTHHHHHHHH-HHTTCEEEECC-SSCCC-HH--------HHTTT-----CBCCSSHHHHHHTCSEEEECCS
T ss_pred CEEEEEccCHHHHHHHHHH-HhCCCEEEEEc-CHHHH-HH--------HHHcC-----CcccCCHHHHHhcCCEEEEECC
Confidence 4899999999999999998 46799999999 65432 11 11111 2234688999999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 246 lt~~t~~li~~--~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
...++..++.. +....+++|.++|+++.|...+.+.|.+.+.+.
T Consensus 68 ~~~~~~~v~~~~~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 113 (295)
T 1yb4_A 68 DTPQVEDVLFGEHGCAKTSLQGKTIVDMSSISPIETKRFAQRVNEM 113 (295)
T ss_dssp SHHHHHHHHHSTTSSTTSCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred CHHHHHHHHhCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 76556666542 455678999999999999888888999998863
No 84
>2dpo_A L-gulonate 3-dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Oryctolagus cuniculus} PDB: 2ep9_A* 3ado_A 3a97_A 3adp_A* 3f3s_A*
Probab=98.85 E-value=4.4e-08 Score=94.73 Aligned_cols=156 Identities=14% Similarity=0.096 Sum_probs=97.2
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHH--HHhhhhhhhhhcCCCCc---------cccccCCHHHH
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQPV---------TWKRASSMDEV 233 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~~---------~~~~~~~l~el 233 (386)
-++|||||+|.||.++|..|+ ..|.+|++||+++...... ........+...+.... ......+++++
T Consensus 6 ~~kI~vIGaG~MG~~iA~~la-~~G~~V~l~d~~~~~~~~~~~~i~~~l~~l~~~G~~~g~~~~~~~~~~i~~~~~~~ea 84 (319)
T 2dpo_A 6 AGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKSLQQSGSLKGSLSAEEQLSLISSCTNLAEA 84 (319)
T ss_dssp -CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHHHHHTTCCCSSSCHHHHHHTEEEECCHHHH
T ss_pred CceEEEEeeCHHHHHHHHHHH-HCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHcCccccccchHHHhhceEEeCCHHHH
Confidence 368999999999999999985 6699999999987643211 10000000111121110 12335789999
Q ss_pred hhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCC
Q 016620 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMK 313 (386)
Q Consensus 234 l~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~ 313 (386)
+++||+|+.|+|.+.+.+.-+-++....+++++++++.+.+ +....+.+.+.. .-...+..-+. |. ...+
T Consensus 85 v~~aDlVieavpe~~~~k~~v~~~l~~~~~~~~Ii~s~tS~--i~~~~la~~~~~-~~r~ig~Hp~~--P~-----~~~~ 154 (319)
T 2dpo_A 85 VEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVN--PP-----YYIP 154 (319)
T ss_dssp TTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECS--ST-----TTCC
T ss_pred HhcCCEEEEeccCCHHHHHHHHHHHHhhCCCCeEEEEeCCC--hHHHHHHHhcCC-CCCeEEeecCC--ch-----hhcc
Confidence 99999999999987766555556777889999999866655 344566665543 23445555444 22 2334
Q ss_pred CeEEcCCCCCCcHHHHHHH
Q 016620 314 NAIVVPHIASASKWTREGM 332 (386)
Q Consensus 314 nvilTPHia~~t~~~~~~~ 332 (386)
-+.++|+-. .+.++.+.+
T Consensus 155 lveiv~g~~-t~~e~~~~~ 172 (319)
T 2dpo_A 155 LVELVPHPE-TSPATVDRT 172 (319)
T ss_dssp EEEEEECTT-CCHHHHHHH
T ss_pred eEEEeCCCC-CCHHHHHHH
Confidence 566777632 344554444
No 85
>1zej_A HBD-9, 3-hydroxyacyl-COA dehydrogenase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: PE8; 2.00A {Archaeoglobus fulgidus}
Probab=98.84 E-value=3e-08 Score=94.71 Aligned_cols=147 Identities=18% Similarity=0.163 Sum_probs=93.0
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
-+.++|||||+|.||.+||..| . .|.+|++||+++...... .+. +... ...+.....++++ +++||+|+.
T Consensus 10 ~~~~~V~vIG~G~MG~~iA~~l-a-aG~~V~v~d~~~~~~~~~-~~~----l~~~--~~~~i~~~~~~~~-~~~aDlVie 79 (293)
T 1zej_A 10 HHHMKVFVIGAGLMGRGIAIAI-A-SKHEVVLQDVSEKALEAA-REQ----IPEE--LLSKIEFTTTLEK-VKDCDIVME 79 (293)
T ss_dssp --CCEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHHHHH-HHH----SCGG--GGGGEEEESSCTT-GGGCSEEEE
T ss_pred cCCCeEEEEeeCHHHHHHHHHH-H-cCCEEEEEECCHHHHHHH-HHH----HHHH--HhCCeEEeCCHHH-HcCCCEEEE
Confidence 4678999999999999999998 5 799999999987643221 110 0000 0001222456666 899999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEE-EEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCC
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAIL-VNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHI 321 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gail-IN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHi 321 (386)
|+|.+.+.+..+-.+ +..+ +++++ +|+|.-.+ ..+.++++ ......++..|. |. ...+-+.++|+-
T Consensus 80 avpe~~~vk~~l~~~-l~~~-~~~IlasntSti~~---~~~a~~~~-~~~r~~G~Hf~~--Pv-----~~~~lveiv~g~ 146 (293)
T 1zej_A 80 AVFEDLNTKVEVLRE-VERL-TNAPLCSNTSVISV---DDIAERLD-SPSRFLGVHWMN--PP-----HVMPLVEIVISR 146 (293)
T ss_dssp CCCSCHHHHHHHHHH-HHTT-CCSCEEECCSSSCH---HHHHTTSS-CGGGEEEEEECS--ST-----TTCCEEEEEECT
T ss_pred cCcCCHHHHHHHHHH-HhcC-CCCEEEEECCCcCH---HHHHHHhh-cccceEeEEecC--cc-----ccCCEEEEECCC
Confidence 999988766655444 5666 89888 58877554 44444443 223466666665 32 345667777753
Q ss_pred CCCcHHHHHHHH
Q 016620 322 ASASKWTREGMA 333 (386)
Q Consensus 322 a~~t~~~~~~~~ 333 (386)
..+.++.+++.
T Consensus 147 -~t~~~~~~~~~ 157 (293)
T 1zej_A 147 -FTDSKTVAFVE 157 (293)
T ss_dssp -TCCHHHHHHHH
T ss_pred -CCCHHHHHHHH
Confidence 23455555443
No 86
>2p4q_A 6-phosphogluconate dehydrogenase, decarboxylating; rossmann fold, oxidoreductase; HET: FLC; 2.37A {Saccharomyces cerevisiae}
Probab=98.83 E-value=1.9e-08 Score=103.01 Aligned_cols=116 Identities=16% Similarity=0.213 Sum_probs=88.7
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh---CCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiVvl 242 (386)
.+|||||+|.||+.+|+.|+ ..|.+|.+|||+...... ..+. ... ..+.....+++++++. +|+|++
T Consensus 11 ~~IgvIGlG~MG~~lA~~La-~~G~~V~v~dr~~~~~~~-l~~~------~~~--~~gi~~~~s~~e~v~~l~~aDvVil 80 (497)
T 2p4q_A 11 ADFGLIGLAVMGQNLILNAA-DHGFTVCAYNRTQSKVDH-FLAN------EAK--GKSIIGATSIEDFISKLKRPRKVML 80 (497)
T ss_dssp CSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSSHHHHH-HHHT------TTT--TSSEECCSSHHHHHHTSCSSCEEEE
T ss_pred CCEEEEeeHHHHHHHHHHHH-HCCCEEEEEeCCHHHHHH-HHcc------ccc--CCCeEEeCCHHHHHhcCCCCCEEEE
Confidence 47999999999999999985 678999999998765321 1110 000 0123335689998887 999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++|....+..++ ++....+++|.++|+++.+...+...+.+.+.+..+.
T Consensus 81 ~Vp~~~~v~~vl-~~l~~~l~~g~iIId~s~~~~~~~~~l~~~l~~~g~~ 129 (497)
T 2p4q_A 81 LVKAGAPVDALI-NQIVPLLEKGDIIIDGGNSHFPDSNRRYEELKKKGIL 129 (497)
T ss_dssp CCCSSHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHHHHTTCE
T ss_pred EcCChHHHHHHH-HHHHHhCCCCCEEEECCCCChhHHHHHHHHHHHcCCc
Confidence 999877777777 5677889999999999999888888898888764443
No 87
>2cvz_A Dehydrogenase, 3-hydroxyisobutyrate dehydrogenase; valine catabolism, NADP+, structural GEN riken structural genomics/proteomics initiative; HET: NDP; 1.80A {Thermus thermophilus} SCOP: a.100.1.1 c.2.1.6 PDB: 1wp4_A*
Probab=98.83 E-value=1e-08 Score=96.77 Aligned_cols=106 Identities=18% Similarity=0.231 Sum_probs=81.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|+|||+|.||+.+|+.|+ . |.+|.+||++...... . ...+. .... +++++.++|+|++|+|
T Consensus 2 ~~i~iiG~G~~G~~~a~~l~-~-g~~V~~~~~~~~~~~~-~--------~~~g~-----~~~~-~~~~~~~~D~vi~~v~ 64 (289)
T 2cvz_A 2 EKVAFIGLGAMGYPMAGHLA-R-RFPTLVWNRTFEKALR-H--------QEEFG-----SEAV-PLERVAEARVIFTCLP 64 (289)
T ss_dssp CCEEEECCSTTHHHHHHHHH-T-TSCEEEECSSTHHHHH-H--------HHHHC-----CEEC-CGGGGGGCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHHh-C-CCeEEEEeCCHHHHHH-H--------HHCCC-----cccC-HHHHHhCCCEEEEeCC
Confidence 47999999999999999984 6 9999999998654211 1 11111 1123 6677889999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
....+..++ ++....+++|.++|+++.+...+.+.|.+.+.+.
T Consensus 65 ~~~~~~~v~-~~l~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 107 (289)
T 2cvz_A 65 TTREVYEVA-EALYPYLREGTYWVDATSGEPEASRRLAERLREK 107 (289)
T ss_dssp SHHHHHHHH-HHHTTTCCTTEEEEECSCCCHHHHHHHHHHHHTT
T ss_pred ChHHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 755566655 5566778999999999999888888999998864
No 88
>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}
Probab=98.81 E-value=8.2e-09 Score=99.07 Aligned_cols=109 Identities=14% Similarity=0.131 Sum_probs=82.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+|+.| ...|.+|.+||++..... . +...+ .....+++++++++|+|++|+|
T Consensus 31 ~~I~iIG~G~mG~~~a~~l-~~~g~~V~~~~~~~~~~~-~--------~~~~g-----~~~~~~~~~~~~~~DvVi~av~ 95 (316)
T 2uyy_A 31 KKIGFLGLGLMGSGIVSNL-LKMGHTVTVWNRTAEKCD-L--------FIQEG-----ARLGRTPAEVVSTCDITFACVS 95 (316)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEECSSGGGGH-H--------HHHTT-----CEECSCHHHHHHHCSEEEECCS
T ss_pred CeEEEEcccHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-H--------HHHcC-----CEEcCCHHHHHhcCCEEEEeCC
Confidence 6899999999999999998 467899999999865421 1 11111 1234578899999999999999
Q ss_pred CChhhhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 246 LDKTTYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 246 lt~~t~~li~~--~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
....+..++.. ..+..++++.++|+++++.....+.|.+.+...
T Consensus 96 ~~~~~~~v~~~~~~~~~~l~~~~~vv~~s~~~~~~~~~l~~~~~~~ 141 (316)
T 2uyy_A 96 DPKAAKDLVLGPSGVLQGIRPGKCYVDMSTVDADTVTELAQVIVSR 141 (316)
T ss_dssp SHHHHHHHHHSTTCGGGGCCTTCEEEECSCCCHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHcCchhHhhcCCCCCEEEECCCCCHHHHHHHHHHHHHc
Confidence 66666665533 235678999999999998877778888888653
No 89
>3k6j_A Protein F01G10.3, confirmed by transcript evidenc; rossmann fold, oxidoreductase; 2.20A {Caenorhabditis elegans}
Probab=98.80 E-value=1.2e-07 Score=95.75 Aligned_cols=156 Identities=16% Similarity=0.143 Sum_probs=96.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC--------ccccccCCHHHHhhhC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--------VTWKRASSMDEVLREA 237 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~l~ell~~a 237 (386)
++|+|||+|.||..||..++ ..|.+|++||++...........+.. +.+.+... .......+++ .+++|
T Consensus 55 ~kVaVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~a~~~i~~~l~~-~~~~G~l~~~~~~~~~~~i~~t~dl~-al~~a 131 (460)
T 3k6j_A 55 NSVAIIGGGTMGKAMAICFG-LAGIETFLVVRNEQRCKQELEVMYAR-EKSFKRLNDKRIEKINANLKITSDFH-KLSNC 131 (460)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHH-HHHTTSCCHHHHHHHHTTEEEESCGG-GCTTC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCeEEEEECcHHHHHHHHHHHHHH-HHHcCCCCHHHHHHHhcceEEeCCHH-HHccC
Confidence 68999999999999999985 67999999999876321111011100 11112110 0112245675 68999
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEE
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIV 317 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvil 317 (386)
|+|+.|+|.+.+.+.-+-++..+.++++++|++.+.+ +....|.+.+.. .-..+++..|. |.. .++-+.+
T Consensus 132 DlVIeAVpe~~~vk~~v~~~l~~~~~~~aIlasnTSs--l~i~~ia~~~~~-p~r~iG~Hffn--Pv~-----~m~LvEI 201 (460)
T 3k6j_A 132 DLIVESVIEDMKLKKELFANLENICKSTCIFGTNTSS--LDLNEISSVLRD-PSNLVGIHFFN--PAN-----VIRLVEI 201 (460)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHHTTSSS-GGGEEEEECCS--STT-----TCCEEEE
T ss_pred CEEEEcCCCCHHHHHHHHHHHHhhCCCCCEEEecCCC--hhHHHHHHhccC-CcceEEEEecc--hhh-----hCCEEEE
Confidence 9999999987776655556777889999999644333 334556655543 24567777776 332 3444667
Q ss_pred cCCCCCCcHHHHHHHHHH
Q 016620 318 VPHIASASKWTREGMATL 335 (386)
Q Consensus 318 TPHia~~t~~~~~~~~~~ 335 (386)
+|+- ..+.++.+.+..+
T Consensus 202 v~g~-~Ts~e~~~~~~~l 218 (460)
T 3k6j_A 202 IYGS-HTSSQAIATAFQA 218 (460)
T ss_dssp ECCS-SCCHHHHHHHHHH
T ss_pred EeCC-CCCHHHHHHHHHH
Confidence 7752 2345555554433
No 90
>2iz1_A 6-phosphogluconate dehydrogenase, decarboxylating; pentose shunt, oxidoreductase, gluconate utilization; HET: ATR RES P33; 2.30A {Lactococcus lactis} PDB: 2iz0_A* 2iyp_A* 2iyo_A*
Probab=98.80 E-value=2.4e-08 Score=101.61 Aligned_cols=116 Identities=16% Similarity=0.152 Sum_probs=87.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh---CCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDiVvl 242 (386)
++|||||+|.||+.+|+.|+ ..|.+|.+|||+.... +...+ ..+ ..+.....+++++++. +|+|++
T Consensus 6 ~~IgvIG~G~mG~~lA~~L~-~~G~~V~v~dr~~~~~-~~l~~-------~~~--~~gi~~~~s~~e~v~~l~~aDvVil 74 (474)
T 2iz1_A 6 ANFGVVGMAVMGKNLALNVE-SRGYTVAIYNRTTSKT-EEVFK-------EHQ--DKNLVFTKTLEEFVGSLEKPRRIML 74 (474)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHH-------HTT--TSCEEECSSHHHHHHTBCSSCEEEE
T ss_pred CcEEEEeeHHHHHHHHHHHH-hCCCEEEEEcCCHHHH-HHHHH-------hCc--CCCeEEeCCHHHHHhhccCCCEEEE
Confidence 57999999999999999984 6789999999986542 22111 110 0112335689998876 999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcce
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFR 293 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~g 293 (386)
|+|....+..++ ++....+++|.++|+++.|...+...+.+.+.+..+..
T Consensus 75 avp~~~~v~~vl-~~l~~~l~~g~iiId~s~~~~~~~~~l~~~l~~~g~~~ 124 (474)
T 2iz1_A 75 MVQAGAATDATI-KSLLPLLDIGDILIDGGNTHFPDTMRRNAELADSGINF 124 (474)
T ss_dssp CCCTTHHHHHHH-HHHGGGCCTTCEEEECSCCCHHHHHHHHHHTTTSSCEE
T ss_pred EccCchHHHHHH-HHHHhhCCCCCEEEECCCCCHHHHHHHHHHHHHCCCeE
Confidence 999877777776 46677899999999999998888888888887644433
No 91
>2pgd_A 6-phosphogluconate dehydrogenase; oxidoreductase (CHOH(D)-NADP+(A)); 2.00A {Ovis aries} SCOP: a.100.1.1 c.2.1.6 PDB: 1pgo_A* 1pgp_A* 1pgq_A* 1pgn_A 2jkv_A*
Probab=98.77 E-value=2.5e-08 Score=101.73 Aligned_cols=118 Identities=14% Similarity=0.172 Sum_probs=87.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh---hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR---EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~---~aDiVvl 242 (386)
++|||||+|.||+.+|+.|+ ..|.+|.+|||+..... ...+. ... ..+.....+++++++ .+|+|++
T Consensus 3 m~IgvIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~~-~l~~~------~~~--g~gi~~~~~~~e~v~~l~~aDvVil 72 (482)
T 2pgd_A 3 ADIALIGLAVMGQNLILNMN-DHGFVVCAFNRTVSKVD-DFLAN------EAK--GTKVLGAHSLEEMVSKLKKPRRIIL 72 (482)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSTHHHH-HHHHT------TTT--TSSCEECSSHHHHHHHBCSSCEEEE
T ss_pred CeEEEEChHHHHHHHHHHHH-HCCCeEEEEeCCHHHHH-HHHhc------ccc--CCCeEEeCCHHHHHhhccCCCEEEE
Confidence 57999999999999999984 67899999999865422 11110 000 011223568888875 8999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga 294 (386)
++|....+..++ ++....+++|.++|+++.|...+...+.+.+.+..+...
T Consensus 73 aVp~~~~v~~vl-~~l~~~l~~g~iII~~s~~~~~~~~~l~~~l~~~g~~~v 123 (482)
T 2pgd_A 73 LVKAGQAVDNFI-EKLVPLLDIGDIIIDGGNSEYRDTMRRCRDLKDKGILFV 123 (482)
T ss_dssp CSCTTHHHHHHH-HHHHHHCCTTCEEEECSCCCHHHHHHHHHHHHHTTCEEE
T ss_pred eCCChHHHHHHH-HHHHhhcCCCCEEEECCCCCHHHHHHHHHHHHHcCCeEe
Confidence 999876777776 456778999999999999988888888888876544433
No 92
>1pgj_A 6PGDH, 6-PGDH, 6-phosphogluconate dehydrogenase; oxidoreductase, CHOH(D)-NADP+(B); 2.82A {Trypanosoma brucei} SCOP: a.100.1.1 c.2.1.6
Probab=98.76 E-value=3e-08 Score=101.05 Aligned_cols=124 Identities=18% Similarity=0.219 Sum_probs=89.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCC--CCccccccCCHHHHhhh---CCEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLRE---ADVI 240 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~---aDiV 240 (386)
++|||||+|.||+.+|+.|+ ..|.+|.+|||+.... +...+. .+. .+.......+++++++. +|+|
T Consensus 2 MkIgVIG~G~mG~~lA~~La-~~G~~V~v~dr~~~~~-~~l~~~-------~g~~~~~~~i~~~~~~~e~v~~l~~aDvV 72 (478)
T 1pgj_A 2 MDVGVVGLGVMGANLALNIA-EKGFKVAVFNRTYSKS-EEFMKA-------NASAPFAGNLKAFETMEAFAASLKKPRKA 72 (478)
T ss_dssp BSEEEECCSHHHHHHHHHHH-HTTCCEEEECSSHHHH-HHHHHH-------TTTSTTGGGEEECSCHHHHHHHBCSSCEE
T ss_pred CEEEEEChHHHHHHHHHHHH-HCCCEEEEEeCCHHHH-HHHHHh-------cCCCCCCCCeEEECCHHHHHhcccCCCEE
Confidence 47999999999999999984 6789999999986542 221111 010 01112345688898875 9999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeecc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVF 299 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~ 299 (386)
++++|....+..++ ++....+++|.++|+++.|...+...+.+.+.+..+.....-|.
T Consensus 73 ilaVp~~~~v~~vl-~~l~~~l~~g~iIId~sng~~~~~~~l~~~l~~~g~~~v~~pv~ 130 (478)
T 1pgj_A 73 LILVQAGAATDSTI-EQLKKVFEKGDILVDTGNAHFKDQGRRAQQLEAAGLRFLGMGIS 130 (478)
T ss_dssp EECCCCSHHHHHHH-HHHHHHCCTTCEEEECCCCCHHHHHHHHHHHHTTTCEEEEEEEE
T ss_pred EEecCChHHHHHHH-HHHHhhCCCCCEEEECCCCChHHHHHHHHHHHHCCCeEEEeecc
Confidence 99999876777776 56677899999999999998888888998888654443333333
No 93
>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1
Probab=98.74 E-value=2.4e-08 Score=98.18 Aligned_cols=108 Identities=17% Similarity=0.234 Sum_probs=80.9
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-hCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (386)
++.|++|+|+|+|+||+.+|+.| ..+|++|+++|++... ..++.+.+ + . ...+.++++. .||++
T Consensus 170 ~L~GktV~V~G~G~VG~~~A~~L-~~~GakVvv~D~~~~~-l~~~a~~~-------g-----a-~~v~~~~ll~~~~DIv 234 (364)
T 1leh_A 170 SLEGLAVSVQGLGNVAKALCKKL-NTEGAKLVVTDVNKAA-VSAAVAEE-------G-----A-DAVAPNAIYGVTCDIF 234 (364)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCHHH-HHHHHHHH-------C-----C-EECCGGGTTTCCCSEE
T ss_pred CCCcCEEEEECchHHHHHHHHHH-HHCCCEEEEEcCCHHH-HHHHHHHc-------C-----C-EEEChHHHhccCCcEe
Confidence 69999999999999999999998 6899999999987643 22222211 1 1 1235556665 89999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 291 (386)
+.|. +.++|+.+.++.|+ ..++++.+++++.+++ ..+.|+++.+
T Consensus 235 ip~a-----~~~~I~~~~~~~lg-~~iV~e~An~p~t~~e-a~~~L~~~Gi 278 (364)
T 1leh_A 235 APCA-----LGAVLNDFTIPQLK-AKVIAGSADNQLKDPR-HGKYLHELGI 278 (364)
T ss_dssp EECS-----CSCCBSTTHHHHCC-CSEECCSCSCCBSSHH-HHHHHHHHTC
T ss_pred eccc-----hHHHhCHHHHHhCC-CcEEEeCCCCCcccHH-HHHHHHhCCC
Confidence 9874 56788888888884 5689999999988755 4566776654
No 94
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=98.72 E-value=6.7e-08 Score=98.16 Aligned_cols=149 Identities=14% Similarity=0.215 Sum_probs=92.5
Q ss_pred CeEEEEecChhHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhh----h----hhhhhhcCCCCccccccCCHHHHhhh
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTA----Y----GQFLKANGEQPVTWKRASSMDEVLRE 236 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~-fg~~V~~~d~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (386)
++|+|||+|.||..+|..|++. .|.+|++||++...... .... + .+.+.... ..+.....++++.+++
T Consensus 6 mkI~VIG~G~mG~~lA~~La~~g~G~~V~~~d~~~~~~~~-l~~g~~~i~e~~l~~~~~~~~--~~~~~~t~~~~e~~~~ 82 (467)
T 2q3e_A 6 KKICCIGAGYVGGPTCSVIAHMCPEIRVTVVDVNESRINA-WNSPTLPIYEPGLKEVVESCR--GKNLFFSTNIDDAIKE 82 (467)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHH-HTSSSCSSCCTTHHHHHHHHB--TTTEEEESCHHHHHHH
T ss_pred cEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHH-HhCCCCCcCCCCHHHHHHHhh--cCCEEEECCHHHHHhc
Confidence 5899999999999999998642 28999999998754221 0000 0 00000000 0112234678889999
Q ss_pred CCEEEEccCCChhhhh-----------cc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEee-ccCCC
Q 016620 237 ADVISLHPVLDKTTYH-----------LI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLD-VFEDE 302 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~-----------li--~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalD-V~~~E 302 (386)
||+|++|+|......+ +. .++....+++|+++|+.|+..+-..+.+.+.+.+....+.... ++.+|
T Consensus 83 aDvViiaVptp~~~~~v~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~~g~~~~l~~~l~~~~~~~~d~~V~~~Pe 162 (467)
T 2q3e_A 83 ADLVFISVNTPTKTYGMGKGRAADLKYIEACARRIVQNSNGYKIVTEKSTVPVRAAESIRRIFDANTKPNLNLQVLSNPE 162 (467)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHHHHHHHHTCCSEEEEEECSCCCTTHHHHHHHHHHHTCCTTCEEEEEECCC
T ss_pred CCEEEEEcCCchhhccccccCCCcHHHHHHHHHHHHhhCCCCCEEEECCcCCchHHHHHHHHHHHhCCCCCCeEEEeCHH
Confidence 9999999985443222 11 2345667899999999999888778888888887542221122 34555
Q ss_pred CCCCC----CCCCCCCeEE
Q 016620 303 PYMKP----GLSEMKNAIV 317 (386)
Q Consensus 303 P~~~~----~L~~~~nvil 317 (386)
+.... .+...+++++
T Consensus 163 ~~~~G~~~~d~~~~~rivv 181 (467)
T 2q3e_A 163 FLAEGTAIKDLKNPDRVLI 181 (467)
T ss_dssp CCCTTSHHHHHHSCSCEEE
T ss_pred HhhcccchhhccCCCEEEE
Confidence 54322 2345556654
No 95
>1i36_A Conserved hypothetical protein MTH1747; NADP binding domain, protein NADP complex, structural genomics, PSI; HET: NAP; 2.00A {Methanothermobacterthermautotrophicus} SCOP: a.100.1.8 c.2.1.6
Probab=98.72 E-value=2.3e-08 Score=93.31 Aligned_cols=103 Identities=12% Similarity=0.091 Sum_probs=75.4
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChh-hHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|||||+|.||+.+|+.|+ ..|.+|++||+... ...+. +...+. . .++++++.+||+|++|+
T Consensus 1 M~I~iIG~G~mG~~la~~l~-~~g~~V~~~~~~~~~~~~~~--------~~~~g~-----~--~~~~~~~~~aDvvi~~v 64 (264)
T 1i36_A 1 LRVGFIGFGEVAQTLASRLR-SRGVEVVTSLEGRSPSTIER--------ARTVGV-----T--ETSEEDVYSCPVVISAV 64 (264)
T ss_dssp CEEEEESCSHHHHHHHHHHH-HTTCEEEECCTTCCHHHHHH--------HHHHTC-----E--ECCHHHHHTSSEEEECS
T ss_pred CeEEEEechHHHHHHHHHHH-HCCCeEEEeCCccCHHHHHH--------HHHCCC-----c--CCHHHHHhcCCEEEEEC
Confidence 47999999999999999984 67899999988321 11111 111121 1 46788899999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
|.......+ .+....+++ ++|+++.+...+.+.|.+.+.+
T Consensus 65 ~~~~~~~~~--~~~~~~~~~--~vi~~s~~~~~~~~~l~~~~~~ 104 (264)
T 1i36_A 65 TPGVALGAA--RRAGRHVRG--IYVDINNISPETVRMASSLIEK 104 (264)
T ss_dssp CGGGHHHHH--HHHHTTCCS--EEEECSCCCHHHHHHHHHHCSS
T ss_pred CCHHHHHHH--HHHHHhcCc--EEEEccCCCHHHHHHHHHHHhh
Confidence 976554543 456677776 9999998887777888888765
No 96
>2yjz_A Metalloreductase steap4; oxidoreductase, metabolic syndrome; HET: NAP; 2.20A {Rattus norvegicus}
Probab=98.15 E-value=1.8e-09 Score=97.60 Aligned_cols=94 Identities=20% Similarity=0.214 Sum_probs=71.3
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
+.+++|||||+|.||+.+|+.| ...|.+|++|||+... +. +... +.. ..+++++++.+|+|++
T Consensus 17 ~~~~~I~iIG~G~mG~~la~~L-~~~G~~V~~~~r~~~~--~~--------~~~~-----g~~-~~~~~~~~~~aDvVil 79 (201)
T 2yjz_A 17 EKQGVVCIFGTGDFGKSLGLKM-LQCGYSVVFGSRNPQV--SS--------LLPR-----GAE-VLCYSEAASRSDVIVL 79 (201)
Confidence 7788999999999999999998 5789999999987541 11 0011 111 2367788999999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCccc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~v 277 (386)
++|.. .+..++ + +..+++++++||+++|-..
T Consensus 80 av~~~-~~~~v~--~-l~~~~~~~ivI~~~~G~~~ 110 (201)
T 2yjz_A 80 AVHRE-HYDFLA--E-LADSLKGRVLIDVSNNQKM 110 (201)
Confidence 99964 566665 2 4557789999999999753
No 97
>3fr7_A Putative ketol-acid reductoisomerase (OS05G057370 protein); rossmann fold, NADPH, knotted protein, branched-chain amino biosynthesis; 1.55A {Oryza sativa japonica group} PDB: 3fr8_A* 1qmg_A* 1yve_I*
Probab=98.69 E-value=1.8e-08 Score=101.59 Aligned_cols=124 Identities=20% Similarity=0.221 Sum_probs=80.1
Q ss_pred cccCC-CeEEEEecChhHHHHHHHHHhcC------CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHH
Q 016620 161 NLLKG-QTVGVIGAGRIGSAYARMMVEGF------KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV 233 (386)
Q Consensus 161 ~~l~g-~~vgIvG~G~IG~~iA~~L~~~f------g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el 233 (386)
..++| ++|||||+|+||.++|+.|+ .. |++|++.++......+. ....+.... .....+++|+
T Consensus 49 ~~L~GiKkIgIIGlGsMG~AmA~nLr-~s~~~~g~G~~ViVg~r~~sks~e~--------A~e~G~~v~-d~ta~s~aEA 118 (525)
T 3fr7_A 49 EAFKGIKQIGVIGWGSQGPAQAQNLR-DSLAEAKSDIVVKIGLRKGSKSFDE--------ARAAGFTEE-SGTLGDIWET 118 (525)
T ss_dssp HHTTTCSEEEEECCTTHHHHHHHHHH-HHHHHTTCCCEEEEEECTTCSCHHH--------HHHTTCCTT-TTCEEEHHHH
T ss_pred HHhcCCCEEEEEeEhHHHHHHHHHHH-hcccccCCCCEEEEEeCCchhhHHH--------HHHCCCEEe-cCCCCCHHHH
Confidence 56899 99999999999999999984 44 99988665543221111 111222110 0012478999
Q ss_pred hhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc-CCcceEEeeccCCCC
Q 016620 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ-NPMFRVGLDVFEDEP 303 (386)
Q Consensus 234 l~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~-g~i~gaalDV~~~EP 303 (386)
+++||+|++++|.... ..++. +.+..||+|++ |-.+.|-. +..+++ +.......||+---|
T Consensus 119 a~~ADVVILaVP~~~~-~eVl~-eI~p~LK~GaI-Ls~AaGf~------I~~le~~~i~~p~dv~VVrVmP 180 (525)
T 3fr7_A 119 VSGSDLVLLLISDAAQ-ADNYE-KIFSHMKPNSI-LGLSHGFL------LGHLQSAGLDFPKNISVIAVCP 180 (525)
T ss_dssp HHHCSEEEECSCHHHH-HHHHH-HHHHHSCTTCE-EEESSSHH------HHHHHHTTCCCCTTSEEEEEEE
T ss_pred HhcCCEEEECCChHHH-HHHHH-HHHHhcCCCCe-EEEeCCCC------HHHHhhhcccCCCCCcEEEEec
Confidence 9999999999997554 34665 78899999998 56667743 334443 222233356665444
No 98
>3d1l_A Putative NADP oxidoreductase BF3122; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.19A {Bacteroides fragilis}
Probab=98.69 E-value=2.2e-08 Score=93.69 Aligned_cols=103 Identities=13% Similarity=0.171 Sum_probs=74.1
Q ss_pred ccccCCCeEEEEecChhHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 160 GNLLKGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 160 g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
.+++.+++|||||+|.||+.+|+.|+ ..|.+ |.+||++..... ...+ ..+ .....+++++++++|
T Consensus 5 ~~~~~~m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~~~~~~~~-~~~~-------~~g-----~~~~~~~~~~~~~~D 70 (266)
T 3d1l_A 5 KRSIEDTPIVLIGAGNLATNLAKALY-RKGFRIVQVYSRTEESAR-ELAQ-------KVE-----AEYTTDLAEVNPYAK 70 (266)
T ss_dssp --CGGGCCEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSHHHHH-HHHH-------HTT-----CEEESCGGGSCSCCS
T ss_pred hcCCCCCeEEEEcCCHHHHHHHHHHH-HCCCeEEEEEeCCHHHHH-HHHH-------HcC-----CceeCCHHHHhcCCC
Confidence 34567789999999999999999984 56888 899999865421 1111 101 122457888889999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccC
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vd 278 (386)
+|++|+|.. ....++ ++....+++++++|+++.|...+
T Consensus 71 vvi~av~~~-~~~~v~-~~l~~~~~~~~ivv~~s~~~~~~ 108 (266)
T 3d1l_A 71 LYIVSLKDS-AFAELL-QGIVEGKREEALMVHTAGSIPMN 108 (266)
T ss_dssp EEEECCCHH-HHHHHH-HHHHTTCCTTCEEEECCTTSCGG
T ss_pred EEEEecCHH-HHHHHH-HHHHhhcCCCcEEEECCCCCchH
Confidence 999999964 334444 45556788999999999987654
No 99
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=98.64 E-value=6.9e-07 Score=87.67 Aligned_cols=223 Identities=17% Similarity=0.196 Sum_probs=125.7
Q ss_pred HHHHHHhCCCeEEEecCCC--CCCCHHHHHH-----------HhcCCCcEEEecCCccccHHHHHHhhccCCcEEEEccc
Q 016620 29 WINLLIEQDCRVEICTQKK--TILSVEDIIA-----------LIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAV 95 (386)
Q Consensus 29 ~~~~l~~~~~~~~~~~~~~--~~~~~~e~~~-----------~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~k~i~~~~~ 95 (386)
..+.|.+.|+++.+-.... ..++.++..+ .+ ++|.|+. ..++...+.. +.+.|...+.....
T Consensus 22 ~v~~l~~~g~~v~ve~~ag~~~~f~d~~y~~aga~i~~~~~~~~--~ad~i~~-vksP~~~~~~--~~~~g~~~~~y~~~ 96 (361)
T 1pjc_A 22 SVRTLVEAGHTVFIETQAGIGAGFADQDYVQAGAQVVPSAKDAW--SREMVVK-VKEPLPAEYD--LMQKDQLLFTYLHL 96 (361)
T ss_dssp HHHHHHTTTCEEEEETTTTGGGTCCHHHHHHHTCEEESSHHHHH--TSSEEEC-SSCCCGGGGG--GCCTTCEEEECCCG
T ss_pred HHHHHHhCCCEEEEeCCCCccCCCCHHHHHHCCCEEECCHHHHh--cCCeEEE-ECCCCHHHHH--hhcCCCEEEEEecc
Confidence 3577777888876633332 2334444432 11 4787664 3344333321 22233345555555
Q ss_pred cccccChhHHhhCCcEEecC---CCC-----CchhHHHHHH--HHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCC
Q 016620 96 GYNNVDVNAANKYGIAVGNT---PGV-----LTETTAELAA--SLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKG 165 (386)
Q Consensus 96 G~d~id~~~~~~~gI~v~n~---~~~-----~~~~vAE~al--~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g 165 (386)
..+.-.++.+.+.|+...|. |.- .-.++++.+- +.+++... +... ..|. +..-. .. ..+.+
T Consensus 97 ~~~~~l~~~l~~~gi~~~~~etvp~k~~~~~~l~~~s~~Ag~~a~~~gA~n-t~~~----~~g~--G~~l~-~l-~~l~~ 167 (361)
T 1pjc_A 97 AAARELTEQLMRVGLTAIAYETVELPNRSLPLLTPMSIIAGRLSVQFGARF-LERQ----QGGR--GVLLG-GV-PGVKP 167 (361)
T ss_dssp GGCHHHHHHHHHHTCEEEEGGGCCCTTSCCTTTHHHHHHHHHHHHHHHHHH-TSGG----GTSC--CCCTT-CB-TTBCC
T ss_pred ccCHHHHHHHHHcCCeEEEEeeeEcccCCccccCcchHHHHHHHHHHHHHH-Hhhc----cCCC--ceecc-CC-CCCCC
Confidence 55544566778889888753 431 1234444443 33443322 2110 1111 00000 01 24778
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|+|+|.|.+|+.+++.+ +.+|++|+++|++..... ...+.+. . ..........++.+.+..+|+|+.+++
T Consensus 168 ~~VlViGaGgvG~~aa~~a-~~~Ga~V~v~dr~~~r~~-~~~~~~~----~--~~~~~~~~~~~~~~~~~~~DvVI~~~~ 239 (361)
T 1pjc_A 168 GKVVILGGGVVGTEAAKMA-VGLGAQVQIFDINVERLS-YLETLFG----S--RVELLYSNSAEIETAVAEADLLIGAVL 239 (361)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHH-HHHHHHG----G--GSEEEECCHHHHHHHHHTCSEEEECCC
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCHHHHH-HHHHhhC----c--eeEeeeCCHHHHHHHHcCCCEEEECCC
Confidence 9999999999999999996 799999999999875421 1111100 0 000000011246677889999999997
Q ss_pred CCh-hhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 246 LDK-TTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 246 lt~-~t~~li~~~~~~~mk~gailIN~aR 273 (386)
... .+..++.++.++.|++|.+++|++-
T Consensus 240 ~~~~~~~~li~~~~~~~~~~g~~ivdv~~ 268 (361)
T 1pjc_A 240 VPGRRAPILVPASLVEQMRTGSVIVDVAV 268 (361)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTC
T ss_pred cCCCCCCeecCHHHHhhCCCCCEEEEEec
Confidence 533 2345668889999999999999974
No 100
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=98.63 E-value=9.7e-08 Score=80.99 Aligned_cols=93 Identities=13% Similarity=0.250 Sum_probs=69.2
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
|++|+|+|.|.||+.+++.| ...|++|.++|++.... +.+.+.+ + .......++++++.++|+|++++
T Consensus 21 ~~~v~iiG~G~iG~~~a~~l-~~~g~~v~v~~r~~~~~-~~~a~~~-------~---~~~~~~~~~~~~~~~~Divi~at 88 (144)
T 3oj0_A 21 GNKILLVGNGMLASEIAPYF-SYPQYKVTVAGRNIDHV-RAFAEKY-------E---YEYVLINDIDSLIKNNDVIITAT 88 (144)
T ss_dssp CCEEEEECCSHHHHHHGGGC-CTTTCEEEEEESCHHHH-HHHHHHH-------T---CEEEECSCHHHHHHTCSEEEECS
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCEEEEEcCCHHHH-HHHHHHh-------C---CceEeecCHHHHhcCCCEEEEeC
Confidence 88999999999999999987 57899999999987542 2222211 1 11223568899999999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
|.. ..++.. ..+++|.+++|++...
T Consensus 89 ~~~---~~~~~~---~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 89 SSK---TPIVEE---RSLMPGKLFIDLGNPP 113 (144)
T ss_dssp CCS---SCSBCG---GGCCTTCEEEECCSSC
T ss_pred CCC---CcEeeH---HHcCCCCEEEEccCCc
Confidence 964 334444 4568899999998753
No 101
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=98.61 E-value=9.7e-07 Score=84.15 Aligned_cols=154 Identities=16% Similarity=0.140 Sum_probs=89.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHH--HHh-hhhhhhhhcCCCCc-------------cccccCC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVT-AYGQFLKANGEQPV-------------TWKRASS 229 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~--~~~-~~~~~~~~~~~~~~-------------~~~~~~~ 229 (386)
++|+|||+|.||..+|..|+ ..|.+|++||++....... ... .+. .+...+.... ......+
T Consensus 16 ~~I~VIG~G~mG~~iA~~la-~~G~~V~~~d~~~~~~~~~~~~i~~~l~-~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 93 (302)
T 1f0y_A 16 KHVTVIGGGLMGAGIAQVAA-ATGHTVVLVDQTEDILAKSKKGIEESLR-KVAKKKFAENPKAGDEFVEKTLSTIATSTD 93 (302)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHHHHHHHHHHHHH-HHHHTTSSSCHHHHHHHHHHHHHTEEEESC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHH-HHHHcCCCCccccchhhHHHHHhceEEecC
Confidence 68999999999999999985 5699999999986542211 000 000 0011111100 1223468
Q ss_pred HHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCC
Q 016620 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGL 309 (386)
Q Consensus 230 l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L 309 (386)
+++.+++||+|++++|.+.+...-+-++....++++++++..+.|- ....+.+.+... -..++.+.+. |.
T Consensus 94 ~~~~~~~aD~Vi~avp~~~~~~~~v~~~l~~~~~~~~iv~s~ts~i--~~~~l~~~~~~~-~~~~g~h~~~--P~----- 163 (302)
T 1f0y_A 94 AASVVHSTDLVVEAIVENLKVKNELFKRLDKFAAEHTIFASNTSSL--QITSIANATTRQ-DRFAGLHFFN--PV----- 163 (302)
T ss_dssp HHHHTTSCSEEEECCCSCHHHHHHHHHHHTTTSCTTCEEEECCSSS--CHHHHHTTSSCG-GGEEEEEECS--ST-----
T ss_pred HHHhhcCCCEEEEcCcCcHHHHHHHHHHHHhhCCCCeEEEECCCCC--CHHHHHHhcCCc-ccEEEEecCC--Cc-----
Confidence 8888999999999999765544444455556788999988554443 334555544321 1244555443 22
Q ss_pred CCCCCeEEcCCCCCCcHHHHHHH
Q 016620 310 SEMKNAIVVPHIASASKWTREGM 332 (386)
Q Consensus 310 ~~~~nvilTPHia~~t~~~~~~~ 332 (386)
...+.+.+.++-. .+.+..+.+
T Consensus 164 ~~~~~~~i~~g~~-~~~e~~~~~ 185 (302)
T 1f0y_A 164 PVMKLVEVIKTPM-TSQKTFESL 185 (302)
T ss_dssp TTCCEEEEECCTT-CCHHHHHHH
T ss_pred ccCceEEEeCCCC-CCHHHHHHH
Confidence 2344555666432 344444444
No 102
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=98.57 E-value=2.9e-07 Score=92.36 Aligned_cols=124 Identities=16% Similarity=0.230 Sum_probs=82.6
Q ss_pred cccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhh--------hhhhhhhcCCCCccccccCCH
Q 016620 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA--------YGQFLKANGEQPVTWKRASSM 230 (386)
Q Consensus 159 ~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l 230 (386)
++++..-++|+|||+|.||..+|..|+ . |.+|++||++..... ..... ..+.+.. . ..+.....++
T Consensus 30 ~~r~~~~mkIaVIGlG~mG~~lA~~La-~-G~~V~~~D~~~~~v~-~l~~g~~~i~e~~l~~ll~~-~--~~~l~~ttd~ 103 (432)
T 3pid_A 30 MGRGSEFMKITISGTGYVGLSNGVLIA-Q-NHEVVALDIVQAKVD-MLNQKISPIVDKEIQEYLAE-K--PLNFRATTDK 103 (432)
T ss_dssp -----CCCEEEEECCSHHHHHHHHHHH-T-TSEEEEECSCHHHHH-HHHTTCCSSCCHHHHHHHHH-S--CCCEEEESCH
T ss_pred cccccCCCEEEEECcCHHHHHHHHHHH-c-CCeEEEEecCHHHhh-HHhccCCccccccHHHHHhh-c--cCCeEEEcCH
Confidence 456777789999999999999999985 4 999999999876422 11100 0000000 0 0112334688
Q ss_pred HHHhhhCCEEEEccCCChh-------hhhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 231 DEVLREADVISLHPVLDKT-------TYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 231 ~ell~~aDiVvl~lPlt~~-------t~~li--~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
++.+++||+|++|+|...+ +..+. -+.... +++|+++|+.|+..+--.+.+.+.+.+.
T Consensus 104 ~ea~~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgtt~~l~~~l~~~ 170 (432)
T 3pid_A 104 HDAYRNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGFTRDIKERLGID 170 (432)
T ss_dssp HHHHTTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTHHHHHHHHHTCC
T ss_pred HHHHhCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHHHHHHHHHHhhc
Confidence 9999999999999996521 11221 244566 9999999999998887788888888654
No 103
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=98.55 E-value=7.4e-07 Score=90.82 Aligned_cols=154 Identities=20% Similarity=0.263 Sum_probs=93.9
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhh---hcCCCCc--------cccccCCHHHH
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---ANGEQPV--------TWKRASSMDEV 233 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~~~~~--------~~~~~~~l~el 233 (386)
-++|||||+|.||..||..++ ..|.+|++||++....... .+.....+. ..+.... +.....+++ .
T Consensus 5 ~~kVgVIGaG~MG~~IA~~la-~aG~~V~l~D~~~e~l~~~-~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~~~~-~ 81 (483)
T 3mog_A 5 VQTVAVIGSGTMGAGIAEVAA-SHGHQVLLYDISAEALTRA-IDGIHARLNSRVTRGKLTAETCERTLKRLIPVTDIH-A 81 (483)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHH-HHHHHHHHHTTTTTTSSCHHHHHHHHHTEEEECCGG-G
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCeEEEEECCHHHHHHH-HHHHHHHHHHHHHcCCCCHHHHHHHHhceeEeCCHH-H
Confidence 358999999999999999985 6799999999987643221 110000011 1111100 112235664 5
Q ss_pred hhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEE-EEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCC
Q 016620 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAIL-VNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEM 312 (386)
Q Consensus 234 l~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gail-IN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~ 312 (386)
+++||+|+.++|.+.+.+.-+-++..+.++++++| +|+|.-. ...|.+.+.. .-..+++..|.+-|. +
T Consensus 82 ~~~aDlVIeAVpe~~~vk~~v~~~l~~~~~~~~IlasntSti~---i~~ia~~~~~-p~~~ig~hf~~Pa~v-------~ 150 (483)
T 3mog_A 82 LAAADLVIEAASERLEVKKALFAQLAEVCPPQTLLTTNTSSIS---ITAIAAEIKN-PERVAGLHFFNPAPV-------M 150 (483)
T ss_dssp GGGCSEEEECCCCCHHHHHHHHHHHHHHSCTTCEEEECCSSSC---HHHHTTTSSS-GGGEEEEEECSSTTT-------C
T ss_pred hcCCCEEEEcCCCcHHHHHHHHHHHHHhhccCcEEEecCCCCC---HHHHHHHccC-ccceEEeeecChhhh-------C
Confidence 89999999999987666544446677789999999 5776644 3455555542 335667776664332 2
Q ss_pred CCeEEcCCCCCCcHHHHHHHH
Q 016620 313 KNAIVVPHIASASKWTREGMA 333 (386)
Q Consensus 313 ~nvilTPHia~~t~~~~~~~~ 333 (386)
+-+.+.|+- ..+.++.+.+.
T Consensus 151 ~Lvevv~g~-~Ts~e~~~~~~ 170 (483)
T 3mog_A 151 KLVEVVSGL-ATAAEVVEQLC 170 (483)
T ss_dssp CEEEEEECS-SCCHHHHHHHH
T ss_pred CeEEEecCC-CCCHHHHHHHH
Confidence 445666642 23445444443
No 104
>2vns_A Metalloreductase steap3; metal-binding, transmembrane, rossmann fold, transport, cell cycle, transferrin, flavoprotein, alternative splicing; HET: CIT; 2.0A {Homo sapiens} PDB: 2vq3_A*
Probab=98.55 E-value=9.5e-08 Score=86.90 Aligned_cols=95 Identities=17% Similarity=0.220 Sum_probs=67.8
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.+++|+|||+|.||+.+|+.| ...|.+|.++||+.... +. +...+ ... .+++++++++|+|++|
T Consensus 27 ~~~~I~iiG~G~~G~~la~~l-~~~g~~V~~~~r~~~~~-~~--------~~~~g-----~~~-~~~~~~~~~~DvVi~a 90 (215)
T 2vns_A 27 EAPKVGILGSGDFARSLATRL-VGSGFKVVVGSRNPKRT-AR--------LFPSA-----AQV-TFQEEAVSSPEVIFVA 90 (215)
T ss_dssp --CCEEEECCSHHHHHHHHHH-HHTTCCEEEEESSHHHH-HH--------HSBTT-----SEE-EEHHHHTTSCSEEEEC
T ss_pred CCCEEEEEccCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH--------HHHcC-----Cce-ecHHHHHhCCCEEEEC
Confidence 457899999999999999998 46789999999986542 11 11111 111 2788899999999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVID 278 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vd 278 (386)
+|. .....++. +..+.+++++|++++|-..+
T Consensus 91 v~~-~~~~~v~~---l~~~~~~~~vv~~s~g~~~~ 121 (215)
T 2vns_A 91 VFR-EHYSSLCS---LSDQLAGKILVDVSNPTEQE 121 (215)
T ss_dssp SCG-GGSGGGGG---GHHHHTTCEEEECCCCCHHH
T ss_pred CCh-HHHHHHHH---HHHhcCCCEEEEeCCCcccc
Confidence 994 34455553 33333799999999987543
No 105
>2i99_A MU-crystallin homolog; thyroid hormine binding protein, oxidoreductase; HET: NDP; 2.60A {Homo sapiens}
Probab=98.54 E-value=2.6e-07 Score=88.91 Aligned_cols=97 Identities=19% Similarity=0.207 Sum_probs=71.6
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
..+++|||||+|.||+.+++.|++.+|. +|.+|||+.... +++.+. .+. ......+++++++++|+|+
T Consensus 133 ~~~~~igiIG~G~~g~~~a~~l~~~~g~~~V~v~dr~~~~~-~~l~~~-------~~~---~~~~~~~~~e~v~~aDiVi 201 (312)
T 2i99_A 133 PSSEVLCILGAGVQAYSHYEIFTEQFSFKEVRIWNRTKENA-EKFADT-------VQG---EVRVCSSVQEAVAGADVII 201 (312)
T ss_dssp TTCCEEEEECCSHHHHHHHHHHHHHCCCSEEEEECSSHHHH-HHHHHH-------SSS---CCEECSSHHHHHTTCSEEE
T ss_pred CCCcEEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHH-HHHHHH-------hhC---CeEEeCCHHHHHhcCCEEE
Confidence 4567899999999999999988655677 899999987542 222111 110 1223568999999999999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~ 276 (386)
+|+|. +..++.. ..+++|.++++++....
T Consensus 202 ~atp~---~~~v~~~---~~l~~g~~vi~~g~~~p 230 (312)
T 2i99_A 202 TVTLA---TEPILFG---EWVKPGAHINAVGASRP 230 (312)
T ss_dssp ECCCC---SSCCBCG---GGSCTTCEEEECCCCST
T ss_pred EEeCC---CCcccCH---HHcCCCcEEEeCCCCCC
Confidence 99994 3556655 56899999999987655
No 106
>2raf_A Putative dinucleotide-binding oxidoreductase; NP_786167.1, NADP oxidoreductase coenzyme F420-dependent, structural genomics; HET: MSE NAP; 1.60A {Lactobacillus plantarum WCFS1}
Probab=98.51 E-value=8.9e-08 Score=86.77 Aligned_cols=80 Identities=15% Similarity=0.228 Sum_probs=60.4
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.++.+++|+|||+|.||+.+|+.| ...|.+|++||++.. .+++||+|
T Consensus 15 ~~~~~~~I~iiG~G~mG~~la~~l-~~~g~~V~~~~~~~~--------------------------------~~~~aD~v 61 (209)
T 2raf_A 15 LYFQGMEITIFGKGNMGQAIGHNF-EIAGHEVTYYGSKDQ--------------------------------ATTLGEIV 61 (209)
T ss_dssp -----CEEEEECCSHHHHHHHHHH-HHTTCEEEEECTTCC--------------------------------CSSCCSEE
T ss_pred cccCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHH--------------------------------HhccCCEE
Confidence 368889999999999999999998 478999999987421 35789999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~ 276 (386)
++|+| ...+..++. +....++ ++++|++++|--
T Consensus 62 i~av~-~~~~~~v~~-~l~~~~~-~~~vi~~~~g~~ 94 (209)
T 2raf_A 62 IMAVP-YPALAALAK-QYATQLK-GKIVVDITNPLN 94 (209)
T ss_dssp EECSC-HHHHHHHHH-HTHHHHT-TSEEEECCCCBC
T ss_pred EEcCC-cHHHHHHHH-HHHHhcC-CCEEEEECCCCC
Confidence 99999 556666653 3445567 999999999754
No 107
>3c24_A Putative oxidoreductase; YP_511008.1, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.62A {Jannaschia SP}
Probab=98.50 E-value=1.8e-07 Score=88.57 Aligned_cols=92 Identities=20% Similarity=0.287 Sum_probs=68.8
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|||+ |.||+.+|+.| ...|.+|++||++..... . +...+. ...++.+++++||+|++|+
T Consensus 12 m~I~iIG~tG~mG~~la~~l-~~~g~~V~~~~r~~~~~~-~--------~~~~g~------~~~~~~~~~~~aDvVi~av 75 (286)
T 3c24_A 12 KTVAILGAGGKMGARITRKI-HDSAHHLAAIEIAPEGRD-R--------LQGMGI------PLTDGDGWIDEADVVVLAL 75 (286)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HHSSSEEEEECCSHHHHH-H--------HHHTTC------CCCCSSGGGGTCSEEEECS
T ss_pred CEEEEECCCCHHHHHHHHHH-HhCCCEEEEEECCHHHHH-H--------HHhcCC------CcCCHHHHhcCCCEEEEcC
Confidence 58999999 99999999998 477899999999865421 1 111121 1135677889999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
|... +..++ ++....+++++++|+++.|.
T Consensus 76 ~~~~-~~~v~-~~l~~~l~~~~ivv~~s~~~ 104 (286)
T 3c24_A 76 PDNI-IEKVA-EDIVPRVRPGTIVLILDAAA 104 (286)
T ss_dssp CHHH-HHHHH-HHHGGGSCTTCEEEESCSHH
T ss_pred CchH-HHHHH-HHHHHhCCCCCEEEECCCCc
Confidence 9533 45554 45666789999999998876
No 108
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=98.50 E-value=6.8e-07 Score=89.89 Aligned_cols=119 Identities=10% Similarity=0.086 Sum_probs=78.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhh----h----hhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA----Y----GQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
++|+|||+|.||..+|..|+ ..|.+|++||++..... ..... + .+.+......+ ......++++.++.|
T Consensus 1 mkI~VIG~G~vG~~~A~~la-~~G~~V~~~d~~~~~~~-~l~~~~~~i~e~~l~~~~~~~~~~g-~l~~t~~~~~~~~~a 77 (436)
T 1mv8_A 1 MRISIFGLGYVGAVCAGCLS-ARGHEVIGVDVSSTKID-LINQGKSPIVEPGLEALLQQGRQTG-RLSGTTDFKKAVLDS 77 (436)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHHH-HHHTTCCSSCCTTHHHHHHHHHHTT-CEEEESCHHHHHHTC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCEEEEEECCHHHHH-HHhCCCCCcCCCCHHHHHHhhcccC-ceEEeCCHHHHhccC
Confidence 47999999999999999985 67899999999865421 11100 0 00000000000 122346888889999
Q ss_pred CEEEEccCCChh---------hhhcccHHHHhcCCC---CcEEEEcCCCcccC-HHHHHHHHHc
Q 016620 238 DVISLHPVLDKT---------TYHLINKERLATMKK---EAILVNCSRGPVID-EVALVEHLKQ 288 (386)
Q Consensus 238 DiVvl~lPlt~~---------t~~li~~~~~~~mk~---gailIN~aRg~~vd-e~aL~~aL~~ 288 (386)
|+|++|+|...+ ....+ ++....+++ ++++|+.|...+-. .+.+.+.+.+
T Consensus 78 DvviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~~~~iVV~~Stv~~g~t~~~l~~~l~~ 140 (436)
T 1mv8_A 78 DVSFICVGTPSKKNGDLDLGYIETVC-REIGFAIREKSERHTVVVRSTVLPGTVNNVVIPLIED 140 (436)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHHTTCCSCCEEEECSCCCTTHHHHTHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcchHHHHHHH-HHHHHHhcccCCCcEEEEeCCcCCCchHHHHHHHHHH
Confidence 999999996543 33332 445556788 99999998766655 5667777765
No 109
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=98.49 E-value=3e-07 Score=85.14 Aligned_cols=105 Identities=23% Similarity=0.334 Sum_probs=72.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc----EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM----NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~----~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
++|||||+|.||+.+|+.|+ ..|. +|++|||+.... +...+. .+ .....++++++++||+|+
T Consensus 3 ~~i~iIG~G~mG~~~a~~l~-~~g~~~~~~V~~~~r~~~~~-~~~~~~-------~g-----~~~~~~~~e~~~~aDvVi 68 (247)
T 3gt0_A 3 KQIGFIGCGNMGMAMIGGMI-NKNIVSSNQIICSDLNTANL-KNASEK-------YG-----LTTTTDNNEVAKNADILI 68 (247)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HTTSSCGGGEEEECSCHHHH-HHHHHH-------HC-----CEECSCHHHHHHHCSEEE
T ss_pred CeEEEECccHHHHHHHHHHH-hCCCCCCCeEEEEeCCHHHH-HHHHHH-------hC-----CEEeCChHHHHHhCCEEE
Confidence 58999999999999999984 6787 999999987542 211111 11 223468899999999999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
+|+|. .....++ ++....++++.++|.+.-|- ..+.|.+.+..
T Consensus 69 lav~~-~~~~~v~-~~l~~~l~~~~~vvs~~~gi--~~~~l~~~~~~ 111 (247)
T 3gt0_A 69 LSIKP-DLYASII-NEIKEIIKNDAIIVTIAAGK--SIESTENAFNK 111 (247)
T ss_dssp ECSCT-TTHHHHC----CCSSCTTCEEEECSCCS--CHHHHHHHHCS
T ss_pred EEeCH-HHHHHHH-HHHHhhcCCCCEEEEecCCC--CHHHHHHHhCC
Confidence 99974 3344444 45556688999998765543 34566666643
No 110
>2izz_A Pyrroline-5-carboxylate reductase 1; amino-acid biosynthesis, NADP, oxidoreductase, proline biosy; HET: NAD; 1.95A {Homo sapiens} PDB: 2ger_A 2gr9_A* 2gra_A*
Probab=98.48 E-value=7e-07 Score=86.14 Aligned_cols=108 Identities=20% Similarity=0.296 Sum_probs=75.4
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCC----cEEEEEcCChh-hHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg----~~V~~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
...++|||||+|.||..+|+.|+ ..| .+|++|||+.. ...+. +...+ .....+..++++.|
T Consensus 20 ~~~mkI~iIG~G~mG~ala~~L~-~~G~~~~~~V~v~~r~~~~~~~~~--------l~~~G-----~~~~~~~~e~~~~a 85 (322)
T 2izz_A 20 FQSMSVGFIGAGQLAFALAKGFT-AAGVLAAHKIMASSPDMDLATVSA--------LRKMG-----VKLTPHNKETVQHS 85 (322)
T ss_dssp --CCCEEEESCSHHHHHHHHHHH-HTTSSCGGGEEEECSCTTSHHHHH--------HHHHT-----CEEESCHHHHHHHC
T ss_pred cCCCEEEEECCCHHHHHHHHHHH-HCCCCCcceEEEECCCccHHHHHH--------HHHcC-----CEEeCChHHHhccC
Confidence 44568999999999999999984 566 78999999864 12221 11112 22235788899999
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
|+|++|+| ......++ .+....++++.++|+++-|-- .+.|.+.+.+
T Consensus 86 DvVilav~-~~~~~~vl-~~l~~~l~~~~ivvs~s~gi~--~~~l~~~l~~ 132 (322)
T 2izz_A 86 DVLFLAVK-PHIIPFIL-DEIGADIEDRHIVVSCAAGVT--ISSIEKKLSA 132 (322)
T ss_dssp SEEEECSC-GGGHHHHH-HHHGGGCCTTCEEEECCTTCC--HHHHHHHHHT
T ss_pred CEEEEEeC-HHHHHHHH-HHHHhhcCCCCEEEEeCCCCC--HHHHHHHHhh
Confidence 99999999 34555554 345567889999999977643 4556666664
No 111
>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A
Probab=98.43 E-value=7.3e-07 Score=82.83 Aligned_cols=102 Identities=16% Similarity=0.222 Sum_probs=72.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
++|||||+|.||+.+++.| ...|.+|.+||++.... +...+.+ + .....+++++++++|+|++|+|
T Consensus 4 m~i~iiG~G~mG~~~a~~l-~~~g~~v~~~~~~~~~~-~~~~~~~-------g-----~~~~~~~~~~~~~~D~Vi~~v~ 69 (259)
T 2ahr_A 4 MKIGIIGVGKMASAIIKGL-KQTPHELIISGSSLERS-KEIAEQL-------A-----LPYAMSHQDLIDQVDLVILGIK 69 (259)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTSSCEEEEECSSHHHH-HHHHHHH-------T-----CCBCSSHHHHHHTCSEEEECSC
T ss_pred cEEEEECCCHHHHHHHHHH-HhCCCeEEEECCCHHHH-HHHHHHc-------C-----CEeeCCHHHHHhcCCEEEEEeC
Confidence 4899999999999999998 56788999999986542 2111111 2 1124678899999999999999
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
.... .+.+..+++|.++|+...|-- .+.+.+.+..+
T Consensus 70 -~~~~-----~~v~~~l~~~~~vv~~~~~~~--~~~l~~~~~~~ 105 (259)
T 2ahr_A 70 -PQLF-----ETVLKPLHFKQPIISMAAGIS--LQRLATFVGQD 105 (259)
T ss_dssp -GGGH-----HHHHTTSCCCSCEEECCTTCC--HHHHHHHHCTT
T ss_pred -cHhH-----HHHHHHhccCCEEEEeCCCCC--HHHHHHhcCCC
Confidence 3333 344555778999999976543 34566666543
No 112
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=98.41 E-value=1.5e-06 Score=87.71 Aligned_cols=119 Identities=14% Similarity=0.160 Sum_probs=78.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhh--------hhhhhcCCCCccccccCCHHHHhhhC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYG--------QFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
++|+|||+|.||..+|..|+ ..|.+|++||++..... ....... +.+... ..........++++++++|
T Consensus 3 mkI~VIG~G~vG~~lA~~La-~~G~~V~~~D~~~~~v~-~l~~g~~~i~e~gl~~~l~~~-~~~~~l~~t~d~~ea~~~a 79 (450)
T 3gg2_A 3 LDIAVVGIGYVGLVSATCFA-ELGANVRCIDTDRNKIE-QLNSGTIPIYEPGLEKMIARN-VKAGRLRFGTEIEQAVPEA 79 (450)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHHH-HHHHTCSCCCSTTHHHHHHHH-HHTTSEEEESCHHHHGGGC
T ss_pred CEEEEECcCHHHHHHHHHHH-hcCCEEEEEECCHHHHH-HHHcCCCcccCCCHHHHHHhh-cccCcEEEECCHHHHHhcC
Confidence 58999999999999999985 67899999999875421 1111000 000000 0001122346889999999
Q ss_pred CEEEEccCCCh---------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 238 DVISLHPVLDK---------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 238 DiVvl~lPlt~---------~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
|+|++|+|... .....+ ++....+++|.++|+.|.-.+-..+.+.+.+++
T Consensus 80 DvViiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgt~~~l~~~l~~ 138 (450)
T 3gg2_A 80 DIIFIAVGTPAGEDGSADMSYVLDAA-RSIGRAMSRYILIVTKSTVPVGSYRLIRKAIQE 138 (450)
T ss_dssp SEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CEEEEEcCCCcccCCCcChHHHHHHH-HHHHhhCCCCCEEEEeeeCCCcchHHHHHHHHH
Confidence 99999998653 223332 456677899999999997655555666666654
No 113
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=98.35 E-value=6.7e-07 Score=84.64 Aligned_cols=106 Identities=10% Similarity=0.072 Sum_probs=74.2
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCc---EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
.++|||||+|+||+.+|+.|+ ..|. +|++|||+..... ... .. .+.....+..+++++||+|+
T Consensus 3 ~~~I~iIG~G~mG~aia~~l~-~~g~~~~~V~v~dr~~~~~~-~l~--------~~----~gi~~~~~~~~~~~~aDvVi 68 (280)
T 3tri_A 3 TSNITFIGGGNMARNIVVGLI-ANGYDPNRICVTNRSLDKLD-FFK--------EK----CGVHTTQDNRQGALNADVVV 68 (280)
T ss_dssp CSCEEEESCSHHHHHHHHHHH-HTTCCGGGEEEECSSSHHHH-HHH--------HT----TCCEEESCHHHHHSSCSEEE
T ss_pred CCEEEEEcccHHHHHHHHHHH-HCCCCCCeEEEEeCCHHHHH-HHH--------HH----cCCEEeCChHHHHhcCCeEE
Confidence 468999999999999999984 5666 8999999876422 111 11 01223468889999999999
Q ss_pred EccCCChhhhhcccHHHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 242 LHPVLDKTTYHLINKERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~-mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
+++|. .....++ ++.-.. ++++.++|+++-|- ..+.|.+.+..
T Consensus 69 lav~p-~~~~~vl-~~l~~~~l~~~~iiiS~~agi--~~~~l~~~l~~ 112 (280)
T 3tri_A 69 LAVKP-HQIKMVC-EELKDILSETKILVISLAVGV--TTPLIEKWLGK 112 (280)
T ss_dssp ECSCG-GGHHHHH-HHHHHHHHTTTCEEEECCTTC--CHHHHHHHHTC
T ss_pred EEeCH-HHHHHHH-HHHHhhccCCCeEEEEecCCC--CHHHHHHHcCC
Confidence 99984 3334444 344444 68888999877654 35677777764
No 114
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=98.34 E-value=1.8e-06 Score=87.04 Aligned_cols=111 Identities=14% Similarity=0.177 Sum_probs=79.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCC----------------CccccccCC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ----------------PVTWKRASS 229 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~ 229 (386)
-+++|||+|.+|..+|..|+ ..|.+|++||++..... . +.. +.. +.......+
T Consensus 9 ~~~~vIGlG~vG~~~A~~La-~~G~~V~~~D~~~~kv~-~--------l~~-g~~~~~epgl~~~~~~~~~~g~l~~ttd 77 (446)
T 4a7p_A 9 VRIAMIGTGYVGLVSGACFS-DFGHEVVCVDKDARKIE-L--------LHQ-NVMPIYEPGLDALVASNVKAGRLSFTTD 77 (446)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCSTTHH-H--------HTT-TCCSSCCTTHHHHHHHHHHTTCEEEESC
T ss_pred eEEEEEcCCHHHHHHHHHHH-HCCCEEEEEeCCHHHHH-H--------Hhc-CCCCccCCCHHHHHHhhcccCCEEEECC
Confidence 46999999999999999985 67999999999876421 1 111 110 011223468
Q ss_pred HHHHhhhCCEEEEccCCChh----------hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 230 MDEVLREADVISLHPVLDKT----------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 230 l~ell~~aDiVvl~lPlt~~----------t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
+++.+++||+|++|+|...+ .+..+ +.....+++|.++|+.|.-.+--.+.+.+.+.+
T Consensus 78 ~~ea~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~-~~i~~~l~~g~iVV~~STv~pgtt~~l~~~l~e 145 (446)
T 4a7p_A 78 LAEGVKDADAVFIAVGTPSRRGDGHADLSYVFAAA-REIAENLTKPSVIVTKSTVPVGTGDEVERIIAE 145 (446)
T ss_dssp HHHHHTTCSEEEECCCCCBCTTTCCBCTHHHHHHH-HHHHHSCCSCCEEEECSCCCTTHHHHHHHHHHH
T ss_pred HHHHHhcCCEEEEEcCCCCccccCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCCCchHHHHHHHHHHH
Confidence 88999999999999885432 22222 566778999999999997666566777777765
No 115
>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2
Probab=98.33 E-value=1.4e-06 Score=82.35 Aligned_cols=169 Identities=16% Similarity=0.165 Sum_probs=106.7
Q ss_pred HHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHHHHH-HhhccCCcEEEEccccccccChhH
Q 016620 33 LIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETLFA-ALSRAGGKAFSNMAVGYNNVDVNA 104 (386)
Q Consensus 33 l~~~~~~~~~~~~~~~~~~~~e~~~~~~-----~~ad~vi~~~~--~~~~~~~l~-~l~~l~~k~i~~~~~G~d~id~~~ 104 (386)
-++.|.+.+....++ ..+++|+.+.+. +..+++++..+ ..+++..+- ...-. |=+ -|+..+++-.
T Consensus 58 ~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~D~~V~GIlvqlPLP~~id~~~i~~~I~p~--KDV----DG~~p~n~g~ 130 (288)
T 1b0a_A 58 CEEVGFVSRSYDLPE-TTSEAELLELIDTLNADNTIDGILVQLPLPAGIDNVKVLERIHPD--KDV----DGFHPYNVGR 130 (288)
T ss_dssp HHHHTCEECCEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHTTSCTT--TCT----TCCSHHHHHH
T ss_pred HHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCcEEEEeCCCCCCCCHHHHHhccCCc--cCc----ccCCccchhH
Confidence 455677665444433 347788765552 24799999764 455554432 22111 211 1222222222
Q ss_pred HhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-hHHHHHHH
Q 016620 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYARM 183 (386)
Q Consensus 105 ~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~-IG~~iA~~ 183 (386)
+. .+.++ +...+++-++- ++++ .+.+++|+++.|||.|. +|+.+|+.
T Consensus 131 l~------~g~~~-~~PcTp~gi~~----ll~~---------------------~~i~l~gk~vvVIG~s~iVG~p~A~l 178 (288)
T 1b0a_A 131 LC------QRAPR-LRPCTPRGIVT----LLER---------------------YNIDTFGLNAVVIGASNIVGRPMSME 178 (288)
T ss_dssp HH------TTCCS-SCCHHHHHHHH----HHHH---------------------TTCCCTTCEEEEECCCTTTHHHHHHH
T ss_pred Hh------CCCCC-CCCCcHHHHHH----HHHH---------------------cCCCCCCCEEEEECCChHHHHHHHHH
Confidence 22 12233 44556655332 2221 12479999999999997 59999999
Q ss_pred HHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCC
Q 016620 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMK 263 (386)
Q Consensus 184 L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk 263 (386)
| ...|++|+.++++. .++.+.+++||+|+.+++. .++|..+. +|
T Consensus 179 L-~~~gAtVtv~hs~t----------------------------~~L~~~~~~ADIVI~Avg~----p~lI~~~~---vk 222 (288)
T 1b0a_A 179 L-LLAGCTTTVTHRFT----------------------------KNLRHHVENADLLIVAVGK----PGFIPGDW---IK 222 (288)
T ss_dssp H-HTTTCEEEEECSSC----------------------------SCHHHHHHHCSEEEECSCC----TTCBCTTT---SC
T ss_pred H-HHCCCeEEEEeCCc----------------------------hhHHHHhccCCEEEECCCC----cCcCCHHH---cC
Confidence 7 68999999987532 4788999999999999984 34677765 48
Q ss_pred CCcEEEEcCCCcc
Q 016620 264 KEAILVNCSRGPV 276 (386)
Q Consensus 264 ~gailIN~aRg~~ 276 (386)
+|+++||+|.-.+
T Consensus 223 ~GavVIDVgi~r~ 235 (288)
T 1b0a_A 223 EGAIVIDVGINRL 235 (288)
T ss_dssp TTCEEEECCCEEC
T ss_pred CCcEEEEccCCcc
Confidence 9999999998654
No 116
>1zcj_A Peroxisomal bifunctional enzyme; peroxisomal multifunctional enzyme type 1, L-bifunction enzyme, MFE-1, fatty acid beta oxidation; 1.90A {Rattus norvegicus}
Probab=98.32 E-value=8.4e-06 Score=82.60 Aligned_cols=131 Identities=16% Similarity=0.163 Sum_probs=78.5
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHH--Hh-hhhhh-----hhhcCCCCccccccCCHHHHhhh
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKF--VT-AYGQF-----LKANGEQPVTWKRASSMDEVLRE 236 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~--~~-~~~~~-----~~~~~~~~~~~~~~~~l~ell~~ 236 (386)
-++|+|||+|.||..+|..|+ ..|.+|++||++........ .. .+... ...............++ +.+++
T Consensus 37 ~~kV~VIGaG~MG~~iA~~la-~~G~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~g~~~~~~~~~~~~~i~~~~-~~~~~ 114 (463)
T 1zcj_A 37 VSSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSST-KELST 114 (463)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCCEEEESCG-GGGTT
T ss_pred CCEEEEECcCHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHhhhcCCH-HHHCC
Confidence 468999999999999999985 67999999999875422110 00 00000 00000001111113466 46789
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFE 300 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~ 300 (386)
||+|+.++|.+.+...-+-++....++++++++..+.+- ....|.+.+.. .-..++++.|.
T Consensus 115 aDlVIeaVpe~~~~k~~v~~~l~~~~~~~~ii~snTs~~--~~~~la~~~~~-~~~~ig~hf~~ 175 (463)
T 1zcj_A 115 VDLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSAL--NVDDIASSTDR-PQLVIGTHFFS 175 (463)
T ss_dssp CSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSSS--CHHHHHTTSSC-GGGEEEEEECS
T ss_pred CCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCCc--CHHHHHHHhcC-CcceEEeecCC
Confidence 999999999765444434455667789999998743332 33466655532 22345666663
No 117
>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}
Probab=98.31 E-value=2.3e-06 Score=80.86 Aligned_cols=171 Identities=19% Similarity=0.218 Sum_probs=107.7
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc----C-CCcEEEecCC--ccccHHHH-HHhhccCCcEEEEccccccccCh
Q 016620 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG----D-KCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDV 102 (386)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~----~-~ad~vi~~~~--~~~~~~~l-~~l~~l~~k~i~~~~~G~d~id~ 102 (386)
+..++.|.+.+....++ ..+++|+.+.+. + ..+++++..+ ..+++..+ +..... |-+ -|+..+++
T Consensus 58 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~ 130 (286)
T 4a5o_A 58 KDCEEVGFLSQAYDLPA-ETSQDDLLALIDRLNDDPAIDGILVQLPLPAHLDASLLLERIHPD--KDV----DGFHPYNI 130 (286)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHTSCGG--GCT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhh
Confidence 34566788876655543 347787775542 2 4789998764 45555433 333111 111 12222222
Q ss_pred hHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-hHHHHH
Q 016620 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (386)
Q Consensus 103 ~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~-IG~~iA 181 (386)
-.+.. | .++ +...++.-++- ++++ .+.+++|+++.|||.|. +|+.+|
T Consensus 131 g~l~~-g-----~~~-~~PcTp~gv~~----lL~~---------------------~~i~l~Gk~vvVvGrs~iVG~plA 178 (286)
T 4a5o_A 131 GRLAQ-R-----MPL-LRPCTPKGIMT----LLAS---------------------TGADLYGMDAVVVGASNIVGRPMA 178 (286)
T ss_dssp HHHHT-T-----CCS-SCCHHHHHHHH----HHHH---------------------TTCCCTTCEEEEECTTSTTHHHHH
T ss_pred HHHhc-C-----CCC-CCCCCHHHHHH----HHHH---------------------hCCCCCCCEEEEECCCchhHHHHH
Confidence 22211 1 232 33445544432 2221 12579999999999987 799999
Q ss_pred HHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhc
Q 016620 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (386)
Q Consensus 182 ~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~ 261 (386)
..| ...|++|++++++. .++++.+++||+|+.+++. .++|..+.
T Consensus 179 ~lL-~~~gAtVtv~hs~T----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 222 (286)
T 4a5o_A 179 LEL-LLGGCTVTVTHRFT----------------------------RDLADHVSRADLVVVAAGK----PGLVKGEW--- 222 (286)
T ss_dssp HHH-HHTTCEEEEECTTC----------------------------SCHHHHHHTCSEEEECCCC----TTCBCGGG---
T ss_pred HHH-HHCCCeEEEEeCCC----------------------------cCHHHHhccCCEEEECCCC----CCCCCHHH---
Confidence 997 68899999886521 3788999999999999984 45677755
Q ss_pred CCCCcEEEEcCCCcc
Q 016620 262 MKKEAILVNCSRGPV 276 (386)
Q Consensus 262 mk~gailIN~aRg~~ 276 (386)
+|+|+++||++.-.+
T Consensus 223 vk~GavVIDvgi~~~ 237 (286)
T 4a5o_A 223 IKEGAIVIDVGINRQ 237 (286)
T ss_dssp SCTTCEEEECCSCSS
T ss_pred cCCCeEEEEeccccc
Confidence 499999999987554
No 118
>1wdk_A Fatty oxidation complex alpha subunit; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: a.100.1.3 a.100.1.3 c.2.1.6 c.14.1.3 PDB: 1wdl_A* 1wdm_A* 2d3t_A*
Probab=98.31 E-value=4.4e-06 Score=89.04 Aligned_cols=156 Identities=17% Similarity=0.141 Sum_probs=91.7
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHH--HHhhhhhhhhhcCCCC--------ccccccCCHHHHh
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVTAYGQFLKANGEQP--------VTWKRASSMDEVL 234 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~--~~~~~~~~~~~~~~~~--------~~~~~~~~l~ell 234 (386)
=++|||||+|.||..||..++ ..|.+|++||++....... .....-+.+...+... .......++ +.+
T Consensus 314 i~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 391 (715)
T 1wdk_A 314 VKQAAVLGAGIMGGGIAYQSA-SKGTPILMKDINEHGIEQGLAEAAKLLVGRVDKGRMTPAKMAEVLNGIRPTLSY-GDF 391 (715)
T ss_dssp CSSEEEECCHHHHHHHHHHHH-HTTCCEEEECSSHHHHHHHHHHHHHHHHHHHTTTSSCHHHHHHHHHHEEEESSS-TTG
T ss_pred CCEEEEECCChhhHHHHHHHH-hCCCEEEEEECCHHHHHHHHHHHHHHHHHHHhcCCCCHHHHHHHhcCeEEECCH-HHH
Confidence 357999999999999999985 5699999999987543211 1100000011111110 011123455 668
Q ss_pred hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCC
Q 016620 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKN 314 (386)
Q Consensus 235 ~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~n 314 (386)
++||+|+.++|.+.+.+.-+-.+..+.++++++++..+.+ +....+.+.+.. .-..++++.|. |. ..++.
T Consensus 392 ~~aDlVIeaV~e~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-~~~~ig~hf~~--P~-----~~~~l 461 (715)
T 1wdk_A 392 GNVDLVVEAVVENPKVKQAVLAEVENHVREDAILASNTST--ISISLLAKALKR-PENFVGMHFFN--PV-----HMMPL 461 (715)
T ss_dssp GGCSEEEECCCSCHHHHHHHHHHHHTTSCTTCEEEECCSS--SCHHHHGGGCSC-GGGEEEEECCS--ST-----TTCCE
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHHHhhCCCCeEEEeCCCC--CCHHHHHHHhcC-ccceEEEEccC--Cc-----ccCce
Confidence 9999999999987766554556677789999999744333 233455554432 12346666665 32 23455
Q ss_pred eEEcCCCCCCcHHHHHHHH
Q 016620 315 AIVVPHIASASKWTREGMA 333 (386)
Q Consensus 315 vilTPHia~~t~~~~~~~~ 333 (386)
+.+.|+- ..+.++.+.+.
T Consensus 462 vevv~g~-~t~~e~~~~~~ 479 (715)
T 1wdk_A 462 VEVIRGE-KSSDLAVATTV 479 (715)
T ss_dssp EEEEECS-SCCHHHHHHHH
T ss_pred EEEEECC-CCCHHHHHHHH
Confidence 6565542 23455555443
No 119
>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}
Probab=98.29 E-value=1.9e-06 Score=81.42 Aligned_cols=172 Identities=17% Similarity=0.243 Sum_probs=108.5
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHHH-HHHhhccCCcEEEEccccccccCh
Q 016620 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETL-FAALSRAGGKAFSNMAVGYNNVDV 102 (386)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~-----~~ad~vi~~~~--~~~~~~~-l~~l~~l~~k~i~~~~~G~d~id~ 102 (386)
+..++.|.+.+....++ ..+++|+.+.+. ++.+++++..+ ..+++.. ++..... |-+ -|+..+++
T Consensus 56 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----Dg~~~~N~ 128 (285)
T 3p2o_A 56 KACEECGIKSLVYHLNE-NITQNELLALINTLNHDDSVHGILVQLPLPDHICKDLILESIISS--KDV----DGFHPINV 128 (285)
T ss_dssp HHHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--GCT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCCEEEecCCCCCCcCHHHHHhhCCcc--ccc----ccCCHhhh
Confidence 33456687776655443 347788876552 25889998764 4455543 3333211 211 12222222
Q ss_pred hHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-hHHHHH
Q 016620 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (386)
Q Consensus 103 ~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~-IG~~iA 181 (386)
-.+.. +.++.+...++.-++ .++++ .+.+++|+++.|||.|. +|+.+|
T Consensus 129 g~l~~------g~~~g~~PcTp~gv~----~lL~~---------------------~~i~l~Gk~vvVvGrs~iVG~p~A 177 (285)
T 3p2o_A 129 GYLNL------GLESGFLPCTPLGVM----KLLKA---------------------YEIDLEGKDAVIIGASNIVGRPMA 177 (285)
T ss_dssp HHHHT------TCCSSCCCHHHHHHH----HHHHH---------------------TTCCCTTCEEEEECCCTTTHHHHH
T ss_pred hhhhc------CCCCCCCCCCHHHHH----HHHHH---------------------hCCCCCCCEEEEECCCchHHHHHH
Confidence 22211 123313444554443 22221 12579999999999988 699999
Q ss_pred HHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhc
Q 016620 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLAT 261 (386)
Q Consensus 182 ~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~ 261 (386)
..| ...|++|++++++. .++++.+++||+|+.+++. .++|..+.
T Consensus 178 ~lL-~~~gAtVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~--- 221 (285)
T 3p2o_A 178 TML-LNAGATVSVCHIKT----------------------------KDLSLYTRQADLIIVAAGC----VNLLRSDM--- 221 (285)
T ss_dssp HHH-HHTTCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSSC----TTCBCGGG---
T ss_pred HHH-HHCCCeEEEEeCCc----------------------------hhHHHHhhcCCEEEECCCC----CCcCCHHH---
Confidence 998 68899999987532 4788999999999999984 45677754
Q ss_pred CCCCcEEEEcCCCcc
Q 016620 262 MKKEAILVNCSRGPV 276 (386)
Q Consensus 262 mk~gailIN~aRg~~ 276 (386)
+|+|+++||++.-.+
T Consensus 222 vk~GavVIDVgi~~~ 236 (285)
T 3p2o_A 222 VKEGVIVVDVGINRL 236 (285)
T ss_dssp SCTTEEEEECCCEEC
T ss_pred cCCCeEEEEeccCcc
Confidence 599999999987554
No 120
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=98.29 E-value=3e-06 Score=83.03 Aligned_cols=110 Identities=14% Similarity=0.123 Sum_probs=73.2
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhh--hhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFL--KANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
.++|+|||.|.+|..+|..|+ ..|.+|.+|+++.... +..... .... ......+.......++++.++.||+|++
T Consensus 29 ~mkI~VIGaG~mG~alA~~La-~~G~~V~l~~r~~~~~-~~i~~~-~~~~~~l~g~~l~~~i~~t~d~~ea~~~aDvVil 105 (356)
T 3k96_A 29 KHPIAILGAGSWGTALALVLA-RKGQKVRLWSYESDHV-DEMQAE-GVNNRYLPNYPFPETLKAYCDLKASLEGVTDILI 105 (356)
T ss_dssp CSCEEEECCSHHHHHHHHHHH-TTTCCEEEECSCHHHH-HHHHHH-SSBTTTBTTCCCCTTEEEESCHHHHHTTCCEEEE
T ss_pred CCeEEEECccHHHHHHHHHHH-HCCCeEEEEeCCHHHH-HHHHHc-CCCcccCCCCccCCCeEEECCHHHHHhcCCEEEE
Confidence 468999999999999999984 6789999999976532 111100 0000 0000011112234688899999999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCH
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE 279 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde 279 (386)
++|. ...+.++ ++....+++++++|+++.|-..++
T Consensus 106 aVp~-~~~~~vl-~~i~~~l~~~~ivvs~~kGi~~~t 140 (356)
T 3k96_A 106 VVPS-FAFHEVI-TRMKPLIDAKTRIAWGTKGLAKGS 140 (356)
T ss_dssp CCCH-HHHHHHH-HHHGGGCCTTCEEEECCCSCBTTT
T ss_pred CCCH-HHHHHHH-HHHHHhcCCCCEEEEEeCCCCcCc
Confidence 9994 2344443 456667889999999988765543
No 121
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=98.29 E-value=4e-06 Score=85.34 Aligned_cols=119 Identities=18% Similarity=0.178 Sum_probs=77.7
Q ss_pred CeEEEEecChhHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhh--------hhhhhhhcCCCCccccccCCHHHHhhh
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTA--------YGQFLKANGEQPVTWKRASSMDEVLRE 236 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~-fg~~V~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (386)
++|+|||+|.||..+|..|++. .|.+|++||++...... .... ..+.+.... ........++++.++.
T Consensus 10 mkI~VIG~G~vG~~~A~~La~~g~g~~V~~~D~~~~~v~~-l~~g~~~i~e~gl~~~~~~~~--~~~l~~t~~~~~~~~~ 86 (481)
T 2o3j_A 10 SKVVCVGAGYVGGPTCAMIAHKCPHITVTVVDMNTAKIAE-WNSDKLPIYEPGLDEIVFAAR--GRNLFFSSDIPKAIAE 86 (481)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHCTTSEEEEECSCHHHHHH-HTSSSCSSCCTTHHHHHHHHB--TTTEEEESCHHHHHHH
T ss_pred CEEEEECCCHHHHHHHHHHHhcCCCCEEEEEECCHHHHHH-HHCCCCCcCCCCHHHHHHHhh--cCCEEEECCHHHHhhc
Confidence 5899999999999999998653 37899999998654211 1000 000000000 0012234577788999
Q ss_pred CCEEEEccCCChh--------------hhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 237 ADVISLHPVLDKT--------------TYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 237 aDiVvl~lPlt~~--------------t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
||+|++|+|.... .... -+...+.+++|.++|+.|.-.+-..+.+.+.+.+
T Consensus 87 aDvvii~Vptp~~~~g~~~~~~~dl~~v~~~-~~~i~~~l~~g~iVV~~STv~~gt~~~l~~~l~~ 151 (481)
T 2o3j_A 87 ADLIFISVNTPTKMYGRGKGMAPDLKYVESV-SRTIAQYAGGPKIVVEKSTVPVKAAESIGCILRE 151 (481)
T ss_dssp CSEEEECCCCCBCCSSTTTTTSBCCHHHHHH-HHHHHHHCCSCEEEEECSCCCTTHHHHHHHHHHH
T ss_pred CCEEEEecCCccccccccccCCCcHHHHHHH-HHHHHHhCCCCCEEEECCCCCCCHHHHHHHHHHH
Confidence 9999999885431 1222 2456677999999999887666556667777776
No 122
>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*
Probab=98.29 E-value=9.2e-07 Score=82.18 Aligned_cols=100 Identities=16% Similarity=0.176 Sum_probs=67.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|||||+|.||+.+|+.|+ ..| .+|.+|||+..... ...+ ..+ .....++++++ ++|+|++|+
T Consensus 1 m~i~iiG~G~mG~~~a~~l~-~~g~~~v~~~~r~~~~~~-~~~~-------~~g-----~~~~~~~~~~~-~~D~vi~~v 65 (263)
T 1yqg_A 1 MNVYFLGGGNMAAAVAGGLV-KQGGYRIYIANRGAEKRE-RLEK-------ELG-----VETSATLPELH-SDDVLILAV 65 (263)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHCSCEEEEECSSHHHHH-HHHH-------HTC-----CEEESSCCCCC-TTSEEEECS
T ss_pred CEEEEECchHHHHHHHHHHH-HCCCCeEEEECCCHHHHH-HHHH-------hcC-----CEEeCCHHHHh-cCCEEEEEe
Confidence 47999999999999999984 567 89999999865421 1111 111 11234566777 999999999
Q ss_pred CCChhhhhcccHHHHhcCC-CCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 245 VLDKTTYHLINKERLATMK-KEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk-~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
| ......++ ..++ ++.++|+++.|-- .+.|.+.+..
T Consensus 66 ~-~~~~~~v~-----~~l~~~~~ivv~~~~g~~--~~~l~~~~~~ 102 (263)
T 1yqg_A 66 K-PQDMEAAC-----KNIRTNGALVLSVAAGLS--VGTLSRYLGG 102 (263)
T ss_dssp C-HHHHHHHH-----TTCCCTTCEEEECCTTCC--HHHHHHHTTS
T ss_pred C-chhHHHHH-----HHhccCCCEEEEecCCCC--HHHHHHHcCC
Confidence 9 44444443 3332 2899999865543 3667776655
No 123
>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A
Probab=98.28 E-value=2e-06 Score=80.88 Aligned_cols=77 Identities=9% Similarity=0.186 Sum_probs=65.1
Q ss_pred cCCCeEEEEecCh-hHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~-IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
++|+++.|||.|. +|+.+|+.| .+.|++|++++++ ..++++.+++||+|+
T Consensus 148 l~Gk~vvVvG~s~iVG~plA~lL-~~~gAtVtv~~~~----------------------------t~~L~~~~~~ADIVI 198 (276)
T 3ngx_A 148 YHENTVTIVNRSPVVGRPLSMML-LNRNYTVSVCHSK----------------------------TKDIGSMTRSSKIVV 198 (276)
T ss_dssp CCSCEEEEECCCTTTHHHHHHHH-HHTTCEEEEECTT----------------------------CSCHHHHHHHSSEEE
T ss_pred cCCCEEEEEcCChHHHHHHHHHH-HHCCCeEEEEeCC----------------------------cccHHHhhccCCEEE
Confidence 8999999999986 799999997 6889999998753 247889999999999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
.+++. .++|..+. +|+|+++||++.-.
T Consensus 199 ~Avg~----p~~I~~~~---vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 199 VAVGR----PGFLNREM---VTPGSVVIDVGINY 225 (276)
T ss_dssp ECSSC----TTCBCGGG---CCTTCEEEECCCEE
T ss_pred ECCCC----CccccHhh---ccCCcEEEEeccCc
Confidence 99985 44677755 59999999998754
No 124
>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*
Probab=98.28 E-value=1e-06 Score=84.90 Aligned_cols=98 Identities=16% Similarity=0.168 Sum_probs=69.8
Q ss_pred cccccCCCeEEEEecChh-HHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc------c--CC
Q 016620 159 VGNLLKGQTVGVIGAGRI-GSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR------A--SS 229 (386)
Q Consensus 159 ~g~~l~g~~vgIvG~G~I-G~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~--~~ 229 (386)
.|.++.|+++.|||.|.| |+.+|+.| .+.|++|+++||+...... ........... . .+
T Consensus 171 ~g~~l~gk~vvVIG~G~iVG~~~A~~L-~~~gAtVtv~nR~~~~l~~-----------ra~~la~~~~~~t~~~~t~~~~ 238 (320)
T 1edz_A 171 EGNRLYGKKCIVINRSEIVGRPLAALL-ANDGATVYSVDVNNIQKFT-----------RGESLKLNKHHVEDLGEYSEDL 238 (320)
T ss_dssp TTCTTTTCEEEEECCCTTTHHHHHHHH-HTTSCEEEEECSSEEEEEE-----------SCCCSSCCCCEEEEEEECCHHH
T ss_pred cCCCCCCCEEEEECCCcchHHHHHHHH-HHCCCEEEEEeCchHHHHh-----------HHHHHhhhcccccccccccHhH
Confidence 346799999999999976 99999998 6899999999987432100 00011110111 1 46
Q ss_pred HHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 230 MDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 230 l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
+++.+.+||+|+.+++. ..-+|..+. +|+|+++||+|..
T Consensus 239 L~e~l~~ADIVIsAtg~---p~~vI~~e~---vk~GavVIDVgi~ 277 (320)
T 1edz_A 239 LKKCSLDSDVVITGVPS---ENYKFPTEY---IKEGAVCINFACT 277 (320)
T ss_dssp HHHHHHHCSEEEECCCC---TTCCBCTTT---SCTTEEEEECSSS
T ss_pred HHHHhccCCEEEECCCC---CcceeCHHH---cCCCeEEEEcCCC
Confidence 88999999999999984 122376655 4899999999874
No 125
>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}
Probab=98.28 E-value=2.3e-06 Score=80.93 Aligned_cols=170 Identities=14% Similarity=0.219 Sum_probs=107.3
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc----C-CCcEEEecCC--ccccHHHH-HHhhccCCcEEEEccccccccCh
Q 016620 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG----D-KCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDV 102 (386)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~----~-~ad~vi~~~~--~~~~~~~l-~~l~~l~~k~i~~~~~G~d~id~ 102 (386)
+..++.|.+.+....++ ..+++|+.+.+. + +.+++++..+ ..+++..+ +..... |-+ -|+..+++
T Consensus 57 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlvqlPlp~~id~~~v~~~I~p~--KDV----DG~~~~N~ 129 (285)
T 3l07_A 57 KACAQVGIDSQVITLPE-HTTESELLELIDQLNNDSSVHAILVQLPLPAHINKNNVIYSIKPE--KDV----DGFHPTNV 129 (285)
T ss_dssp HHHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSSCCTTSCHHHHHHHSCGG--GBT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHHhCCCCCcEEEEcCCCCCCcCHHHHHhhCCcc--ccc----ccCChhhe
Confidence 33456687776655443 347788765552 2 4789998764 44555433 333211 211 12222222
Q ss_pred hHHhhCCcEEecC-CCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-hHHHH
Q 016620 103 NAANKYGIAVGNT-PGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAY 180 (386)
Q Consensus 103 ~~~~~~gI~v~n~-~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~-IG~~i 180 (386)
-.+.. +. ++ +...++.-++- ++++ .+.+++|+++.|||.|. +|+.+
T Consensus 130 G~l~~------g~~~~-~~PcTp~gv~~----lL~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~ 177 (285)
T 3l07_A 130 GRLQL------RDKKC-LESCTPKGIMT----MLRE---------------------YGIKTEGAYAVVVGASNVVGKPV 177 (285)
T ss_dssp HHHHH------TCTTC-CCCHHHHHHHH----HHHH---------------------TTCCCTTCEEEEECCCTTTHHHH
T ss_pred eehhc------CCCCC-CCCCCHHHHHH----HHHH---------------------hCCCCCCCEEEEECCCchhHHHH
Confidence 22211 11 23 33455544442 2221 12479999999999998 69999
Q ss_pred HHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHh
Q 016620 181 ARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (386)
Q Consensus 181 A~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~ 260 (386)
|+.| ...|++|++++++ ..++++.+++||+|+.+++. .++|..+.
T Consensus 178 A~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADIVI~Avg~----p~~I~~~~-- 222 (285)
T 3l07_A 178 SQLL-LNAKATVTTCHRF----------------------------TTDLKSHTTKADILIVAVGK----PNFITADM-- 222 (285)
T ss_dssp HHHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSEEEECCCC----TTCBCGGG--
T ss_pred HHHH-HHCCCeEEEEeCC----------------------------chhHHHhcccCCEEEECCCC----CCCCCHHH--
Confidence 9997 6899999988653 14788999999999999984 45677754
Q ss_pred cCCCCcEEEEcCCCc
Q 016620 261 TMKKEAILVNCSRGP 275 (386)
Q Consensus 261 ~mk~gailIN~aRg~ 275 (386)
+|+|+++||++.-.
T Consensus 223 -vk~GavVIDvgi~~ 236 (285)
T 3l07_A 223 -VKEGAVVIDVGINH 236 (285)
T ss_dssp -SCTTCEEEECCCEE
T ss_pred -cCCCcEEEEecccC
Confidence 59999999998755
No 126
>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A
Probab=98.28 E-value=2.4e-06 Score=80.54 Aligned_cols=170 Identities=17% Similarity=0.176 Sum_probs=109.0
Q ss_pred HHHhCCCeEEEecCCCCCCCHHHHHHHhc-----CCCcEEEecCC--ccccHHHH-HHhhccCCcEEEEccccccccChh
Q 016620 32 LLIEQDCRVEICTQKKTILSVEDIIALIG-----DKCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDVN 103 (386)
Q Consensus 32 ~l~~~~~~~~~~~~~~~~~~~~e~~~~~~-----~~ad~vi~~~~--~~~~~~~l-~~l~~l~~k~i~~~~~G~d~id~~ 103 (386)
.-++.|.+.+....++ ..+++|+.+.+. ++.+++++..+ ..+++..+ +...-. |=+ -|+..+++-
T Consensus 56 ~~~~~Gi~~~~~~lp~-~~s~~ell~~i~~lN~D~~v~GIlvqlPlP~~id~~~i~~~I~p~--KDV----DG~~p~n~g 128 (281)
T 2c2x_A 56 DCAKVGITSIRRDLPA-DISTATLNETIDELNANPDCTGYIVQLPLPKHLDENAALERVDPA--KDA----DGLHPTNLG 128 (281)
T ss_dssp HHHHHTCEEEEEEECT-TCCHHHHHHHHHHHHHCTTCCEEEECSCCCTTSCHHHHHHHSCGG--GBT----TSCCHHHHH
T ss_pred HHHHcCCEEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEeCCCCCCCCHHHHHhhcCcc--CCc----cCCChhhHH
Confidence 3455688776655543 357888876552 14799998754 45555443 332211 211 122222222
Q ss_pred HHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChh-HHHHHH
Q 016620 104 AANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRI-GSAYAR 182 (386)
Q Consensus 104 ~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~I-G~~iA~ 182 (386)
.+.. +.++ +...+++-++- ++++ .+.+++|+++.|||.|.| |+.+|+
T Consensus 129 ~l~~------g~~~-~~PcTp~gi~~----ll~~---------------------~~i~l~gk~vvVvG~s~iVG~p~A~ 176 (281)
T 2c2x_A 129 RLVL------GTPA-PLPCTPRGIVH----LLRR---------------------YDISIAGAHVVVIGRGVTVGRPLGL 176 (281)
T ss_dssp HHHH------TCCC-CCCHHHHHHHH----HHHH---------------------TTCCCTTCEEEEECCCTTTHHHHHH
T ss_pred HHhC------CCCC-CCCChHHHHHH----HHHH---------------------cCCCCCCCEEEEECCCcHHHHHHHH
Confidence 2221 2233 44556655332 2221 124799999999999986 999999
Q ss_pred HHHhcC--CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHh
Q 016620 183 MMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKERLA 260 (386)
Q Consensus 183 ~L~~~f--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~ 260 (386)
.| ... |++|+.++++. .++.+.+++||+|+.+++. .++|..+.
T Consensus 177 lL-~~~g~~atVtv~h~~t----------------------------~~L~~~~~~ADIVI~Avg~----p~~I~~~~-- 221 (281)
T 2c2x_A 177 LL-TRRSENATVTLCHTGT----------------------------RDLPALTRQADIVVAAVGV----AHLLTADM-- 221 (281)
T ss_dssp HH-TSTTTCCEEEEECTTC----------------------------SCHHHHHTTCSEEEECSCC----TTCBCGGG--
T ss_pred HH-hcCCCCCEEEEEECch----------------------------hHHHHHHhhCCEEEECCCC----CcccCHHH--
Confidence 97 577 89999886532 4788999999999999984 34677766
Q ss_pred cCCCCcEEEEcCCCcc
Q 016620 261 TMKKEAILVNCSRGPV 276 (386)
Q Consensus 261 ~mk~gailIN~aRg~~ 276 (386)
+|+|+++||+|.-.+
T Consensus 222 -vk~GavVIDVgi~r~ 236 (281)
T 2c2x_A 222 -VRPGAAVIDVGVSRT 236 (281)
T ss_dssp -SCTTCEEEECCEEEE
T ss_pred -cCCCcEEEEccCCCC
Confidence 489999999998654
No 127
>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*
Probab=98.26 E-value=2.8e-06 Score=80.85 Aligned_cols=80 Identities=16% Similarity=0.303 Sum_probs=67.0
Q ss_pred cccCCCeEEEEecCh-hHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 161 NLLKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~-IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.++.|+++.|||.|. +|+.+|+.| ...|++|++++++ ..++++.+++||+
T Consensus 161 i~l~gk~vvVIG~s~iVG~p~A~lL-~~~gAtVtv~hs~----------------------------t~~L~~~~~~ADI 211 (301)
T 1a4i_A 161 VPIAGRHAVVVGRSKIVGAPMHDLL-LWNNATVTTCHSK----------------------------TAHLDEEVNKGDI 211 (301)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHH-HHTTCEEEEECTT----------------------------CSSHHHHHTTCSE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHH-HhCCCeEEEEECC----------------------------cccHHHHhccCCE
Confidence 579999999999996 699999997 6899999998743 2478899999999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~ 276 (386)
|+.+++. .++|..+. +|+|+++||+|.-.+
T Consensus 212 VI~Avg~----p~~I~~~~---vk~GavVIDVgi~~~ 241 (301)
T 1a4i_A 212 LVVATGQ----PEMVKGEW---IKPGAIVIDCGINYV 241 (301)
T ss_dssp EEECCCC----TTCBCGGG---SCTTCEEEECCCBC-
T ss_pred EEECCCC----cccCCHHH---cCCCcEEEEccCCCc
Confidence 9999985 44677766 579999999998654
No 128
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=98.26 E-value=4.4e-06 Score=83.11 Aligned_cols=110 Identities=15% Similarity=0.205 Sum_probs=75.8
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCC-------------CccccccCCHHH
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-------------PVTWKRASSMDE 232 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~l~e 232 (386)
++|+|||+|.||..+|..|+ . |.+|++||++..... . +...+.. ........++++
T Consensus 1 MkI~VIG~G~vG~~~A~~La-~-G~~V~~~d~~~~~~~-~--------l~~~~~~i~e~~l~~~~~~~~~~l~~t~~~~~ 69 (402)
T 1dlj_A 1 MKIAVAGSGYVGLSLGVLLS-L-QNEVTIVDILPSKVD-K--------INNGLSPIQDEYIEYYLKSKQLSIKATLDSKA 69 (402)
T ss_dssp CEEEEECCSHHHHHHHHHHT-T-TSEEEEECSCHHHHH-H--------HHTTCCSSCCHHHHHHHHHSCCCEEEESCHHH
T ss_pred CEEEEECCCHHHHHHHHHHh-C-CCEEEEEECCHHHHH-H--------HHcCCCCcCCCCHHHHHHhccCcEEEeCCHHH
Confidence 47999999999999999985 5 899999999865421 1 1111100 001122357788
Q ss_pred HhhhCCEEEEccCCCh----------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 233 VLREADVISLHPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 233 ll~~aDiVvl~lPlt~----------~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
.++.||+|++|+|... .....+ +.... +++++++|+.+.-.+-..+.+.+.+..
T Consensus 70 ~~~~aDvviiavpt~~~~~~~~~dl~~v~~v~-~~i~~-l~~~~iVV~~ST~~~g~~~~l~~~~~~ 133 (402)
T 1dlj_A 70 AYKEAELVIIATPTNYNSRINYFDTQHVETVI-KEVLS-VNSHATLIIKSTIPIGFITEMRQKFQT 133 (402)
T ss_dssp HHHHCSEEEECCCCCEETTTTEECCHHHHHHH-HHHHH-HCSSCEEEECSCCCTTHHHHHHHHTTC
T ss_pred HhcCCCEEEEecCCCcccCCCCccHHHHHHHH-HHHHh-hCCCCEEEEeCCCCccHHHHHHHHhCC
Confidence 8999999999999753 133333 34555 889999999777666666777776654
No 129
>1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A*
Probab=98.25 E-value=4.5e-06 Score=74.88 Aligned_cols=124 Identities=11% Similarity=0.133 Sum_probs=79.8
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|+| .|.||+.+++.| ...|.+|.++||+..... ...+.+..... ..... ..+++++++++|+|++++
T Consensus 1 m~i~iiGa~G~~G~~ia~~l-~~~g~~V~~~~r~~~~~~-~~~~~~~~~~~-----~~~~~-~~~~~~~~~~~D~Vi~~~ 72 (212)
T 1jay_A 1 MRVALLGGTGNLGKGLALRL-ATLGHEIVVGSRREEKAE-AKAAEYRRIAG-----DASIT-GMKNEDAAEACDIAVLTI 72 (212)
T ss_dssp CEEEEETTTSHHHHHHHHHH-HTTTCEEEEEESSHHHHH-HHHHHHHHHHS-----SCCEE-EEEHHHHHHHCSEEEECS
T ss_pred CeEEEEcCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHH-HHHHHhccccc-----cCCCC-hhhHHHHHhcCCEEEEeC
Confidence 4799999 999999999998 467899999999765421 11111100000 00011 357888899999999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCcccC------------HHHHHHHHHcCCcceEEeeccCCCCC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVID------------EVALVEHLKQNPMFRVGLDVFEDEPY 304 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~~vd------------e~aL~~aL~~g~i~gaalDV~~~EP~ 304 (386)
|. ..+..++. +....++ +.++|+++.|--.+ .+.|.+.+.. ...++++.+.|.
T Consensus 73 ~~-~~~~~~~~-~l~~~~~-~~~vi~~~~g~~~~~~~~~~~~g~~~~~~l~~~~~~----~~~v~~~~~~~~ 137 (212)
T 1jay_A 73 PW-EHAIDTAR-DLKNILR-EKIVVSPLVPVSRGAKGFTYSSERSAAEIVAEVLES----EKVVSALHTIPA 137 (212)
T ss_dssp CH-HHHHHHHH-HTHHHHT-TSEEEECCCCEECCTTCCEECCSSCHHHHHHHHHTC----SCEEECCTTCCH
T ss_pred Ch-hhHHHHHH-HHHHHcC-CCEEEEcCCCcCcCCceeecCCCCcHHHHHHHhCCC----CeEEEEccchHH
Confidence 93 33444432 3333454 89999999865432 4666666642 345677776653
No 130
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=98.25 E-value=3.8e-06 Score=85.46 Aligned_cols=119 Identities=13% Similarity=0.124 Sum_probs=75.3
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCC--------CccccccCCHHHHhhh
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--------PVTWKRASSMDEVLRE 236 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~l~ell~~ 236 (386)
.++|+|||+|.||..+|..|+ ..|.+|++||++.... +....... .....+.. ........++++.++.
T Consensus 8 ~~~I~VIG~G~vG~~lA~~la-~~G~~V~~~d~~~~~v-~~l~~~~~-~i~e~gl~~~l~~~~~~~~l~~ttd~~~a~~~ 84 (478)
T 2y0c_A 8 SMNLTIIGSGSVGLVTGACLA-DIGHDVFCLDVDQAKI-DILNNGGV-PIHEPGLKEVIARNRSAGRLRFSTDIEAAVAH 84 (478)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHTTCC-SSCCTTHHHHHHHHHHTTCEEEECCHHHHHHH
T ss_pred CceEEEECcCHHHHHHHHHHH-hCCCEEEEEECCHHHH-HHHHCCCC-CcCCCCHHHHHHHhcccCCEEEECCHHHHhhc
Confidence 468999999999999999985 6789999999986542 11111000 00000000 0012234678888999
Q ss_pred CCEEEEccCCC---------hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 016620 237 ADVISLHPVLD---------KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (386)
Q Consensus 237 aDiVvl~lPlt---------~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~ 287 (386)
||+|++|+|.. ......+ ++....+++++++|+.|...+-..+.+.+.+.
T Consensus 85 aDvviiaVptp~~~~~~~dl~~v~~v~-~~i~~~l~~~~iVV~~STv~~gt~~~l~~~l~ 143 (478)
T 2y0c_A 85 GDVQFIAVGTPPDEDGSADLQYVLAAA-RNIGRYMTGFKVIVDKSTVPVGTAERVRAAVA 143 (478)
T ss_dssp CSEEEECCCCCBCTTSSBCCHHHHHHH-HHHHHHCCSCEEEEECSCCCTTHHHHHHHHHH
T ss_pred CCEEEEEeCCCcccCCCccHHHHHHHH-HHHHHhcCCCCEEEEeCCcCCCchHHHHHHHH
Confidence 99999999863 2233333 44566789999999998544433444555554
No 131
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=98.24 E-value=2.4e-06 Score=80.92 Aligned_cols=109 Identities=14% Similarity=0.117 Sum_probs=72.9
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
++.|+++.|+|.|.+|++++..| ...|+ +|++++|+.....+ + ..........++++.+.++|+|
T Consensus 114 ~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a~~---------l----a~~~~~~~~~~~~~~~~~aDiV 179 (277)
T 3don_A 114 GIEDAYILILGAGGASKGIANEL-YKIVRPTLTVANRTMSRFNN---------W----SLNINKINLSHAESHLDEFDII 179 (277)
T ss_dssp TGGGCCEEEECCSHHHHHHHHHH-HTTCCSCCEEECSCGGGGTT---------C----CSCCEEECHHHHHHTGGGCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHHHH---------H----HHhcccccHhhHHHHhcCCCEE
Confidence 57899999999999999999998 57898 89999998754210 1 0111111234566778899999
Q ss_pred EEccCCC--hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 241 SLHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 241 vl~lPlt--~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
+.++|.. +.....+. .+.++++.+++|+...+. .+. |+++.++.
T Consensus 180 InaTp~Gm~~~~~~~l~---~~~l~~~~~V~D~vY~P~-~T~-ll~~A~~~ 225 (277)
T 3don_A 180 INTTPAGMNGNTDSVIS---LNRLASHTLVSDIVYNPY-KTP-ILIEAEQR 225 (277)
T ss_dssp EECCC-------CCSSC---CTTCCSSCEEEESCCSSS-SCH-HHHHHHHT
T ss_pred EECccCCCCCCCcCCCC---HHHcCCCCEEEEecCCCC-CCH-HHHHHHHC
Confidence 9999964 22222232 356789999999987643 344 55554443
No 132
>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}
Probab=98.24 E-value=2.4e-06 Score=81.24 Aligned_cols=173 Identities=21% Similarity=0.223 Sum_probs=107.3
Q ss_pred HHHHhCCCeEEEecCCCCCCCHHHHHHHhc----C-CCcEEEecCC--ccccHHHH-HHhhccCCcEEEEccccccccCh
Q 016620 31 NLLIEQDCRVEICTQKKTILSVEDIIALIG----D-KCDGVIGQLT--EDWGETLF-AALSRAGGKAFSNMAVGYNNVDV 102 (386)
Q Consensus 31 ~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~----~-~ad~vi~~~~--~~~~~~~l-~~l~~l~~k~i~~~~~G~d~id~ 102 (386)
+..++.|.+.+....++ ..+++|+.+.+. + ..+++++..+ ..+++..+ +..... |-+ -|+..+++
T Consensus 60 k~~~~~Gi~~~~~~lp~-~~s~~ell~~I~~lN~d~~v~GIlVqlPLP~~id~~~v~~~I~p~--KDV----DG~~~~N~ 132 (300)
T 4a26_A 60 KAAAEVGMASFNVELPE-DISQEVLEVNVEKLNNDPNCHGIIVQLPLPKHLNENRAIEKIHPH--KDA----DALLPVNV 132 (300)
T ss_dssp HHHHHTTCEEEEEEECT-TCCHHHHHHHHHHHHTCTTCCEEEECSCCCTTSCHHHHHHTSCGG--GCT----TCCSHHHH
T ss_pred HHHHHcCCeEEEEECCC-CCCHHHHHHHHHHhcCCCCCCEEEEcCCCCCCCCHHHHHhhCCcc--ccc----ccCCcceE
Confidence 34566788776655543 347777775542 1 4789998764 44555443 332211 111 12222222
Q ss_pred hHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-hHHHHH
Q 016620 103 NAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYA 181 (386)
Q Consensus 103 ~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~-IG~~iA 181 (386)
-.+...+ ..++ +...++.-++- ++++ .+.+++|+++.|||.|. +|+.+|
T Consensus 133 G~l~~g~----~~~~-~~PcTp~gv~~----lL~~---------------------~~i~l~Gk~vvVIG~s~iVG~p~A 182 (300)
T 4a26_A 133 GLLHYKG----REPP-FTPCTAKGVIV----LLKR---------------------CGIEMAGKRAVVLGRSNIVGAPVA 182 (300)
T ss_dssp HHHHCTT----CCCS-CCCHHHHHHHH----HHHH---------------------HTCCCTTCEEEEECCCTTTHHHHH
T ss_pred EEeecCC----CcCC-CCCCCHHHHHH----HHHH---------------------cCCCCCCCEEEEECCCchHHHHHH
Confidence 2221110 0133 34455554442 2221 12479999999999988 699999
Q ss_pred HHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHH--HHhhhCCEEEEccCCChhhhhcccHHHH
Q 016620 182 RMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD--EVLREADVISLHPVLDKTTYHLINKERL 259 (386)
Q Consensus 182 ~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--ell~~aDiVvl~lPlt~~t~~li~~~~~ 259 (386)
+.| ...|++|++++++. .+++ +.+++||+|+.+++. .++|..+.
T Consensus 183 ~lL-~~~gAtVtv~~~~T----------------------------~~l~l~~~~~~ADIVI~Avg~----p~~I~~~~- 228 (300)
T 4a26_A 183 ALL-MKENATVTIVHSGT----------------------------STEDMIDYLRTADIVIAAMGQ----PGYVKGEW- 228 (300)
T ss_dssp HHH-HHTTCEEEEECTTS----------------------------CHHHHHHHHHTCSEEEECSCC----TTCBCGGG-
T ss_pred HHH-HHCCCeEEEEeCCC----------------------------CCchhhhhhccCCEEEECCCC----CCCCcHHh-
Confidence 998 58899999998632 2455 889999999999995 44677654
Q ss_pred hcCCCCcEEEEcCCCcc
Q 016620 260 ATMKKEAILVNCSRGPV 276 (386)
Q Consensus 260 ~~mk~gailIN~aRg~~ 276 (386)
+|+|+++||++.-.+
T Consensus 229 --vk~GavVIDvgi~~~ 243 (300)
T 4a26_A 229 --IKEGAAVVDVGTTPV 243 (300)
T ss_dssp --SCTTCEEEECCCEEE
T ss_pred --cCCCcEEEEEeccCC
Confidence 599999999987544
No 133
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=98.23 E-value=4.2e-06 Score=81.03 Aligned_cols=118 Identities=14% Similarity=0.155 Sum_probs=74.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCC-Cccc-cccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ-PVTW-KRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~l~ell~~aDiVvl~ 243 (386)
++|+|||+|.||..+|..|+ ..|.+|.+||++.... +...+...-.+...... .... ....+++++++.+|+|++|
T Consensus 5 mki~iiG~G~~G~~~a~~L~-~~g~~V~~~~r~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~ 82 (359)
T 1bg6_A 5 KTYAVLGLGNGGHAFAAYLA-LKGQSVLAWDIDAQRI-KEIQDRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIV 82 (359)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHHHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEEC
T ss_pred CeEEEECCCHHHHHHHHHHH-hCCCEEEEEeCCHHHH-HHHHhcCCeEEeccccccccccceecCCHHHHHhcCCEEEEe
Confidence 68999999999999999984 6789999999976532 11111000000000000 0000 1246888988999999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
+|... +..++ ++....+++++++|+. -|.......+.+.+..
T Consensus 83 v~~~~-~~~~~-~~l~~~l~~~~~vv~~-~~~~~~~~~~~~~l~~ 124 (359)
T 1bg6_A 83 VPAIH-HASIA-ANIASYISEGQLIILN-PGATGGALEFRKILRE 124 (359)
T ss_dssp SCGGG-HHHHH-HHHGGGCCTTCEEEES-SCCSSHHHHHHHHHHH
T ss_pred CCchH-HHHHH-HHHHHhCCCCCEEEEc-CCCchHHHHHHHHHHh
Confidence 99644 34444 5566778999999998 4412233445555554
No 134
>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}
Probab=98.23 E-value=5.5e-06 Score=77.36 Aligned_cols=105 Identities=17% Similarity=0.180 Sum_probs=74.8
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
+.| +++|+|.|.+|++++..| ...|+ +|++++|+.... ++ +. .........++.+.++++|+|+
T Consensus 107 ~~~-~vliiGaGg~a~ai~~~L-~~~G~~~I~v~nR~~~ka-~~--------la----~~~~~~~~~~~~~~~~~aDiVI 171 (253)
T 3u62_A 107 VKE-PVVVVGAGGAARAVIYAL-LQMGVKDIWVVNRTIERA-KA--------LD----FPVKIFSLDQLDEVVKKAKSLF 171 (253)
T ss_dssp CCS-SEEEECCSHHHHHHHHHH-HHTTCCCEEEEESCHHHH-HT--------CC----SSCEEEEGGGHHHHHHTCSEEE
T ss_pred CCC-eEEEECcHHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HH--------HH----HHcccCCHHHHHhhhcCCCEEE
Confidence 578 999999999999999998 47888 899999987542 11 11 1111123457788899999999
Q ss_pred EccCCC--hhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 242 LHPVLD--KTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 242 l~lPlt--~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
+++|.. ++ ...+..+. ++++.+++++.-+ .++-|.++.+.|
T Consensus 172 natp~gm~p~-~~~i~~~~---l~~~~~V~Divy~---~T~ll~~A~~~G 214 (253)
T 3u62_A 172 NTTSVGMKGE-ELPVSDDS---LKNLSLVYDVIYF---DTPLVVKARKLG 214 (253)
T ss_dssp ECSSTTTTSC-CCSCCHHH---HTTCSEEEECSSS---CCHHHHHHHHHT
T ss_pred ECCCCCCCCC-CCCCCHHH---hCcCCEEEEeeCC---CcHHHHHHHHCC
Confidence 999863 22 22344444 4689999999988 566666666665
No 135
>2wtb_A MFP2, fatty acid multifunctional protein (ATMFP2); oxidoreductase, peroxisomes, beta-oxidation, fatty acid oxidation; 2.50A {Arabidopsis thaliana}
Probab=98.22 E-value=9.2e-06 Score=86.71 Aligned_cols=154 Identities=18% Similarity=0.155 Sum_probs=89.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhh---hcCCC--------CccccccCCHHHHh
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK---ANGEQ--------PVTWKRASSMDEVL 234 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~~l~ell 234 (386)
++|||||+|.||..+|..++ ..|.+|++||++....... .......++ ..+.. ........++ +.+
T Consensus 313 ~kV~VIGaG~MG~~iA~~la-~aG~~V~l~D~~~~~~~~~-~~~i~~~l~~~~~~G~~~~~~~~~~~~~i~~~~d~-~~~ 389 (725)
T 2wtb_A 313 KKVAIIGGGLMGSGIATALI-LSNYPVILKEVNEKFLEAG-IGRVKANLQSRVRKGSMSQEKFEKTMSLLKGSLDY-ESF 389 (725)
T ss_dssp CCEEEECCSHHHHHHHHHHH-TTTCCEEEECSSHHHHHHH-HHHHHHHHHHTTC----CTTHHHHTTTSEEEESSS-GGG
T ss_pred cEEEEEcCCHhhHHHHHHHH-hCCCEEEEEECCHHHHHHH-HHHHHHHHHHHHhcCCCCHHHHHHHhcceEEeCCH-HHH
Confidence 57999999999999999985 6799999999987543211 000000011 11110 0111223456 568
Q ss_pred hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCC
Q 016620 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKN 314 (386)
Q Consensus 235 ~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~n 314 (386)
++||+|+.++|.+.+.+.-+-.+..+.++++++++..+.+ +....+.+.++. .-..++++.|. |. ..++.
T Consensus 390 ~~aDlVIeaVpe~~~vk~~v~~~l~~~~~~~~IlasntSt--l~i~~la~~~~~-p~~~iG~hf~~--P~-----~~~~l 459 (725)
T 2wtb_A 390 RDVDMVIEAVIENISLKQQIFADLEKYCPQHCILASNTST--IDLNKIGERTKS-QDRIVGAHFFS--PA-----HIMPL 459 (725)
T ss_dssp TTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHTTTCSC-TTTEEEEEECS--ST-----TTCCE
T ss_pred CCCCEEEEcCcCCHHHHHHHHHHHHhhCCCCcEEEeCCCC--CCHHHHHHHhcC-CCCEEEecCCC--Cc-----ccCce
Confidence 9999999999987665554446677789999998644333 223445544432 12346666665 32 23455
Q ss_pred eEEcCCCCCCcHHHHHHHH
Q 016620 315 AIVVPHIASASKWTREGMA 333 (386)
Q Consensus 315 vilTPHia~~t~~~~~~~~ 333 (386)
+.+.|+- ..+.++.+.+.
T Consensus 460 vevv~g~-~t~~e~~~~~~ 477 (725)
T 2wtb_A 460 LEIVRTN-HTSAQVIVDLL 477 (725)
T ss_dssp EEEEECS-SCCHHHHHHHH
T ss_pred EEEEECC-CCCHHHHHHHH
Confidence 6666542 23455544443
No 136
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=98.21 E-value=3.7e-06 Score=81.62 Aligned_cols=107 Identities=17% Similarity=0.196 Sum_probs=69.5
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCC-------cEEEEEcCChh-----hHHHHHHhhhhhhhhh-cC-CCCccccccCCH
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQA-----TRLEKFVTAYGQFLKA-NG-EQPVTWKRASSM 230 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l 230 (386)
.++|+|||+|.||..+|..|+ ..| .+|.+||++.. .. +.... ....... .+ ..+.......++
T Consensus 8 ~mkI~iIG~G~mG~~~a~~l~-~~g~~~~~~~~~V~~~~r~~~~~~~~~~-~~l~~-~~~~~~~~~~~~~~~~~~~~~~~ 84 (354)
T 1x0v_A 8 SKKVCIVGSGNWGSAIAKIVG-GNAAQLAQFDPRVTMWVFEEDIGGKKLT-EIINT-QHENVKYLPGHKLPPNVVAVPDV 84 (354)
T ss_dssp CEEEEEECCSHHHHHHHHHHH-HHHHHCTTEEEEEEEECCCCBSSSSBHH-HHHHH-HSCCTTTSTTCCCCTTEEEESSH
T ss_pred CCeEEEECCCHHHHHHHHHHH-hcCCcccCCCCeEEEEEcChhhhhhHHH-HHHHh-cCcccccCCcccCccCeEEEcCH
Confidence 358999999999999999985 446 89999998765 21 11100 0000000 00 001122234678
Q ss_pred HHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016620 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (386)
Q Consensus 231 ~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~ 276 (386)
+++++.||+|++|+|. .....++ ++....+++++++|+++.|-.
T Consensus 85 ~~~~~~aD~Vilav~~-~~~~~v~-~~i~~~l~~~~ivv~~~~Gi~ 128 (354)
T 1x0v_A 85 VQAAEDADILIFVVPH-QFIGKIC-DQLKGHLKANATGISLIKGVD 128 (354)
T ss_dssp HHHHTTCSEEEECCCG-GGHHHHH-HHHTTCSCTTCEEEECCCCBC
T ss_pred HHHHcCCCEEEEeCCH-HHHHHHH-HHHHhhCCCCCEEEEECCccC
Confidence 8889999999999995 3444444 445566789999999988754
No 137
>2rcy_A Pyrroline carboxylate reductase; malaria, structural genomics, pyrroline reductase, oxidoredu structural genomics consortium, SGC; HET: NAP; 2.30A {Plasmodium falciparum}
Probab=98.19 E-value=2.1e-06 Score=79.72 Aligned_cols=98 Identities=22% Similarity=0.320 Sum_probs=65.9
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCC----cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFK----MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg----~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.++|||||+|.||+.+|+.|+ ..| .+|.+||++... .+.....+.+++++++|+|
T Consensus 4 ~m~i~iiG~G~mG~~~a~~l~-~~g~~~~~~v~~~~~~~~~--------------------~g~~~~~~~~~~~~~~D~v 62 (262)
T 2rcy_A 4 NIKLGFMGLGQMGSALAHGIA-NANIIKKENLFYYGPSKKN--------------------TTLNYMSSNEELARHCDII 62 (262)
T ss_dssp SSCEEEECCSHHHHHHHHHHH-HHTSSCGGGEEEECSSCCS--------------------SSSEECSCHHHHHHHCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCCCCCeEEEEeCCccc--------------------CceEEeCCHHHHHhcCCEE
Confidence 468999999999999999985 456 689999987532 1122345788999999999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
++|+|. .....++ .+....++ +.++|....| ++.+.+.+.+..
T Consensus 63 i~~v~~-~~~~~v~-~~l~~~l~-~~~vv~~~~g--i~~~~l~~~~~~ 105 (262)
T 2rcy_A 63 VCAVKP-DIAGSVL-NNIKPYLS-SKLLISICGG--LNIGKLEEMVGS 105 (262)
T ss_dssp EECSCT-TTHHHHH-HHSGGGCT-TCEEEECCSS--CCHHHHHHHHCT
T ss_pred EEEeCH-HHHHHHH-HHHHHhcC-CCEEEEECCC--CCHHHHHHHhCC
Confidence 999994 4455544 23444564 4444444333 233566666654
No 138
>1txg_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; oxidoreductase; 1.70A {Archaeoglobus fulgidus} SCOP: a.100.1.6 c.2.1.6
Probab=98.19 E-value=4.2e-06 Score=80.34 Aligned_cols=110 Identities=18% Similarity=0.166 Sum_probs=72.4
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcC--ChhhHHHHHHhhhhhhhhhcCCC---C---ccccccC--CHHHHhh
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL--YQATRLEKFVTAYGQFLKANGEQ---P---VTWKRAS--SMDEVLR 235 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~--~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~--~l~ell~ 235 (386)
++|+|||+|.||..+|..|+ ..|.+|++||+ +.... +. +...+.. + ....... ++++.++
T Consensus 1 m~I~iiG~G~mG~~~a~~L~-~~g~~V~~~~r~~~~~~~-~~--------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 70 (335)
T 1txg_A 1 MIVSILGAGAMGSALSVPLV-DNGNEVRIWGTEFDTEIL-KS--------ISAGREHPRLGVKLNGVEIFWPEQLEKCLE 70 (335)
T ss_dssp CEEEEESCCHHHHHHHHHHH-HHCCEEEEECCGGGHHHH-HH--------HHTTCCBTTTTBCCCSEEEECGGGHHHHHT
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEEccCCHHHH-HH--------HHHhCcCcccCccccceEEecHHhHHHHHh
Confidence 47999999999999999985 56889999999 55432 11 1111110 0 0011233 6778889
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc---c-cCHHHHHHHHHc
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP---V-IDEVALVEHLKQ 288 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~---~-vde~aL~~aL~~ 288 (386)
.+|+|++++|.. .+..++ ++... +++++++|+++.|- - -..+.+.+.+.+
T Consensus 71 ~~D~vi~~v~~~-~~~~v~-~~i~~-l~~~~~vv~~~ng~~~~~~~~~~~l~~~~~~ 124 (335)
T 1txg_A 71 NAEVVLLGVSTD-GVLPVM-SRILP-YLKDQYIVLISKGLIDFDNSVLTVPEAVWRL 124 (335)
T ss_dssp TCSEEEECSCGG-GHHHHH-HHHTT-TCCSCEEEECCCSEEEETTEEEEHHHHHHTT
T ss_pred cCCEEEEcCChH-HHHHHH-HHHhc-CCCCCEEEEEcCcCccCCCCcCccHHHHHHH
Confidence 999999999964 444444 34556 88899999998764 1 123445666654
No 139
>1evy_A Glycerol-3-phosphate dehydrogenase; rossmann fold, oxidoreductase; HET: MYS; 1.75A {Leishmania mexicana} SCOP: a.100.1.6 c.2.1.6 PDB: 1evz_A* 1jdj_A* 1m66_A* 1m67_A* 1n1e_A* 1n1g_A*
Probab=98.19 E-value=1.8e-06 Score=84.46 Aligned_cols=106 Identities=14% Similarity=0.185 Sum_probs=68.5
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh-cC-CCCccccccCCHHHHhhhCCEEEEcc
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NG-EQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
+|+|||+|.||..+|..|+ ..|.+|.+||++.... +...+.. ..... .+ ..+.......+++++++.+|+|++|+
T Consensus 17 kI~iIG~G~mG~~la~~L~-~~G~~V~~~~r~~~~~-~~l~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~aDvVilav 93 (366)
T 1evy_A 17 KAVVFGSGAFGTALAMVLS-KKCREVCVWHMNEEEV-RLVNEKR-ENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVI 93 (366)
T ss_dssp EEEEECCSHHHHHHHHHHT-TTEEEEEEECSCHHHH-HHHHHHT-BCTTTSTTCBCCTTEEEESCHHHHHTTCSSEEECC
T ss_pred eEEEECCCHHHHHHHHHHH-hCCCEEEEEECCHHHH-HHHHHcC-cccccccccccccceeeeCCHHHHHcCCCEEEECC
Confidence 8999999999999999984 6788999999986432 1111100 00000 00 00111223467888899999999999
Q ss_pred CCChhhhhcccHH---HHhcCCC-CcEEEEcCCCcc
Q 016620 245 VLDKTTYHLINKE---RLATMKK-EAILVNCSRGPV 276 (386)
Q Consensus 245 Plt~~t~~li~~~---~~~~mk~-gailIN~aRg~~ 276 (386)
|. .....++... ....+++ ++++|+++.|-.
T Consensus 94 ~~-~~~~~v~~~~~~gl~~~l~~~~~ivv~~~~gi~ 128 (366)
T 1evy_A 94 PT-QFLRGFFEKSGGNLIAYAKEKQVPVLVCTKGIE 128 (366)
T ss_dssp CH-HHHHHHHHHHCHHHHHHHHHHTCCEEECCCSCC
T ss_pred Ch-HHHHHHHHHhHHHHHHhcCccCCEEEEECCcCC
Confidence 94 4455554321 4455677 899999987643
No 140
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=98.17 E-value=4.3e-06 Score=84.97 Aligned_cols=116 Identities=14% Similarity=0.080 Sum_probs=74.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcC-Cc-EEEEEcCChh----hHHHHHHhh------hhhhhhhc---CCCCccccccCCH
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGF-KM-NLIYYDLYQA----TRLEKFVTA------YGQFLKAN---GEQPVTWKRASSM 230 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~f-g~-~V~~~d~~~~----~~~~~~~~~------~~~~~~~~---~~~~~~~~~~~~l 230 (386)
++|+|||+|.+|..+|..|+ .. |. +|++||++.. .. +..... |...+... ...........+
T Consensus 19 mkIaVIGlG~mG~~lA~~la-~~~G~~~V~~~D~~~~~~~~kv-~~l~~g~~~i~~~e~gl~~l~~~~~~~g~l~~ttd- 95 (478)
T 3g79_A 19 KKIGVLGMGYVGIPAAVLFA-DAPCFEKVLGFQRNSKSSGYKI-EMLNRGESPLKGEEPGLEELIGKVVKAGKFECTPD- 95 (478)
T ss_dssp CEEEEECCSTTHHHHHHHHH-HSTTCCEEEEECCCCTTTTTHH-HHHTTTCCCSSCCGGGHHHHHHHHHHTTCEEEESC-
T ss_pred CEEEEECcCHHHHHHHHHHH-HhCCCCeEEEEECChhHhHHHH-HHHHhcCCCccccCCCHHHHHHhhcccCCeEEeCc-
Confidence 58999999999999999986 56 88 9999999876 32 111000 00000000 000001112234
Q ss_pred HHHhhhCCEEEEccCCCh--------hhhhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHH
Q 016620 231 DEVLREADVISLHPVLDK--------TTYHLI--NKERLATMKKEAILVNCSRGPVIDEVALVE 284 (386)
Q Consensus 231 ~ell~~aDiVvl~lPlt~--------~t~~li--~~~~~~~mk~gailIN~aRg~~vde~aL~~ 284 (386)
.+.+++||+|++|+|... +...+. .+.....+++|.++|+.|.-++--.+.+.+
T Consensus 96 ~ea~~~aDvViiaVptp~~~~~~~~~dl~~v~~~~~~i~~~l~~g~iVV~~STv~pgtt~~v~~ 159 (478)
T 3g79_A 96 FSRISELDAVTLAIQTPFANPKDLEPDFSALIDGIRNVGKYLKPGMLVVLESTITPGTTEGMAK 159 (478)
T ss_dssp GGGGGGCSEEEECCCCCCCSSCCSSCCCHHHHHHHHHHHHHCCTTCEEEECSCCCTTTTTTHHH
T ss_pred HHHHhcCCEEEEecCCchhccCCccccHHHHHHHHHHHHhhcCCCcEEEEeCCCChHHHHHHHH
Confidence 678899999999999652 222232 245677899999999999877655666654
No 141
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=98.13 E-value=2.1e-05 Score=75.84 Aligned_cols=149 Identities=11% Similarity=0.100 Sum_probs=94.8
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHH--HHHh-hhhhhhhhcCCCC---------ccccccCCHH
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLE--KFVT-AYGQFLKANGEQP---------VTWKRASSMD 231 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~--~~~~-~~~~~~~~~~~~~---------~~~~~~~~l~ 231 (386)
.-.+|+|||.|.||+.+|..++ ..|++|+.||+++..... +... .+.. +...+... .......+++
T Consensus 5 ~~~~VaViGaG~MG~giA~~~a-~~G~~V~l~D~~~~~l~~~~~~i~~~l~~-~~~~g~~~~~~~~~~~l~~i~~~~~l~ 82 (319)
T 3ado_A 5 AAGDVLIVGSGLVGRSWAMLFA-SGGFRVKLYDIEPRQITGALENIRKEMKS-LQQSGSLKGSLSAEEQLSLISSCTNLA 82 (319)
T ss_dssp --CEEEEECCSHHHHHHHHHHH-HTTCCEEEECSCHHHHHHHHHHHHHHHHH-HHHTTCCCSSSCHHHHHHTEEEECCHH
T ss_pred CCCeEEEECCcHHHHHHHHHHH-hCCCeEEEEECCHHHHHHHHHHHHHHHHH-HHHcCCCCCccCHHHHHhhcccccchH
Confidence 3468999999999999999985 679999999998754221 1111 1111 11111110 0122357899
Q ss_pred HHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCC
Q 016620 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSE 311 (386)
Q Consensus 232 ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~ 311 (386)
+.++.||+|+=++|-+-+.+.-+-++.=+.++++++|-.-+++ +....|.++++. .=...++..|.+-| +..
T Consensus 83 ~a~~~ad~ViEav~E~l~iK~~lf~~l~~~~~~~aIlaSNTSs--l~is~ia~~~~~-p~r~ig~HffNP~~-----~m~ 154 (319)
T 3ado_A 83 EAVEGVVHIQECVPENLDLKRKIFAQLDSIVDDRVVLSSSSSC--LLPSKLFTGLAH-VKQCIVAHPVNPPY-----YIP 154 (319)
T ss_dssp HHTTTEEEEEECCCSCHHHHHHHHHHHHTTCCSSSEEEECCSS--CCHHHHHTTCTT-GGGEEEEEECSSTT-----TCC
T ss_pred hHhccCcEEeeccccHHHHHHHHHHHHHHHhhhcceeehhhhh--ccchhhhhhccC-CCcEEEecCCCCcc-----ccc
Confidence 9999999999999988777766667777788999988544443 344666666553 34556666554332 222
Q ss_pred CCCeEEcCCCC
Q 016620 312 MKNAIVVPHIA 322 (386)
Q Consensus 312 ~~nvilTPHia 322 (386)
+=-|+-+|+++
T Consensus 155 LVEiv~g~~Ts 165 (319)
T 3ado_A 155 LVELVPHPETS 165 (319)
T ss_dssp EEEEEECTTCC
T ss_pred hHHhcCCCCCc
Confidence 22366666654
No 142
>1yj8_A Glycerol-3-phosphate dehydrogenase; SGPP, structural genomics, PSI; 2.85A {Plasmodium falciparum}
Probab=98.13 E-value=3.8e-06 Score=82.53 Aligned_cols=105 Identities=12% Similarity=0.136 Sum_probs=67.4
Q ss_pred CeEEEEecChhHHHHHHHHHhcCC-------cEEEEEcCChh-----hHHHHHHhhhhhhhhh-cC-CCCccccccCCHH
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFK-------MNLIYYDLYQA-----TRLEKFVTAYGQFLKA-NG-EQPVTWKRASSMD 231 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg-------~~V~~~d~~~~-----~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~l~ 231 (386)
++|+|||.|.||..+|..|++ .| .+|.+||++.. .. +.... ....... .+ ..+.+.....+++
T Consensus 22 ~kI~iIGaG~mG~alA~~L~~-~G~~~~~~~~~V~~~~r~~~~~~~~~~-~~l~~-~~~~~~~~~~~~~~~~i~~~~~~~ 98 (375)
T 1yj8_A 22 LKISILGSGNWASAISKVVGT-NAKNNYLFENEVRMWIRDEFVNGERMV-DIINN-KHENTKYLKGVPLPHNIVAHSDLA 98 (375)
T ss_dssp BCEEEECCSHHHHHHHHHHHH-HHHHCTTBCSCEEEECCSCC---CCHH-HHHHH-HCBCTTTSTTCBCCTTEEEESSTH
T ss_pred CEEEEECcCHHHHHHHHHHHH-cCCccCCCCCeEEEEECChhhhhHHHH-HHHHh-cCcccccCCcccCcCCeEEECCHH
Confidence 479999999999999998854 45 78999998764 21 11100 0000000 00 0111223346788
Q ss_pred HHhhhCCEEEEccCCChhhhhcccHHHHh----cCCCCcEEEEcCCCc
Q 016620 232 EVLREADVISLHPVLDKTTYHLINKERLA----TMKKEAILVNCSRGP 275 (386)
Q Consensus 232 ell~~aDiVvl~lPlt~~t~~li~~~~~~----~mk~gailIN~aRg~ 275 (386)
++++.||+|++++|. .....++ .+... .+++++++|+++.|-
T Consensus 99 ea~~~aDvVilav~~-~~~~~vl-~~i~~~~~~~l~~~~ivvs~~~Gi 144 (375)
T 1yj8_A 99 SVINDADLLIFIVPC-QYLESVL-ASIKESESIKIASHAKAISLTKGF 144 (375)
T ss_dssp HHHTTCSEEEECCCH-HHHHHHH-HHHTC---CCCCTTCEEEECCCSC
T ss_pred HHHcCCCEEEEcCCH-HHHHHHH-HHHhhhhhccCCCCCEEEEeCCcc
Confidence 889999999999994 4444444 33444 678899999998773
No 143
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=98.10 E-value=1.6e-05 Score=75.90 Aligned_cols=114 Identities=15% Similarity=0.166 Sum_probs=74.5
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
++.|++++|+|.|.+|+.++..| ...|+ +|++++|+.... ++..+. .+..........++.+.+.++|+|
T Consensus 138 ~l~~~~vlVlGaGg~g~aia~~L-~~~G~~~V~v~nR~~~ka-~~la~~-------~~~~~~~~~~~~~~~~~~~~aDiv 208 (297)
T 2egg_A 138 TLDGKRILVIGAGGGARGIYFSL-LSTAAERIDMANRTVEKA-ERLVRE-------GDERRSAYFSLAEAETRLAEYDII 208 (297)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTTCSEEEEECSSHHHH-HHHHHH-------SCSSSCCEECHHHHHHTGGGCSEE
T ss_pred CCCCCEEEEECcHHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHH-------hhhccCceeeHHHHHhhhccCCEE
Confidence 47899999999999999999998 57898 999999986542 221111 111000111113566778899999
Q ss_pred EEccCCChhhh---hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 241 SLHPVLDKTTY---HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 241 vl~lPlt~~t~---~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
+.++|...... -.+. ...++++.+++|++.. ...+. |.+..++.
T Consensus 209 In~t~~~~~~~~~~~~i~---~~~l~~~~~v~D~~y~-P~~T~-ll~~A~~~ 255 (297)
T 2egg_A 209 INTTSVGMHPRVEVQPLS---LERLRPGVIVSDIIYN-PLETK-WLKEAKAR 255 (297)
T ss_dssp EECSCTTCSSCCSCCSSC---CTTCCTTCEEEECCCS-SSSCH-HHHHHHHT
T ss_pred EECCCCCCCCCCCCCCCC---HHHcCCCCEEEEcCCC-CCCCH-HHHHHHHC
Confidence 99999754211 1233 2457889999999885 33443 66665554
No 144
>1y81_A Conserved hypothetical protein; hyperthermophIle, structural genomics, PSI, protein structure initiative; HET: COA; 1.70A {Pyrococcus furiosus} SCOP: c.2.1.8
Probab=98.09 E-value=4.3e-06 Score=70.83 Aligned_cols=103 Identities=12% Similarity=0.120 Sum_probs=73.6
Q ss_pred cCCCeEEEEec----ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 163 LKGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 163 l~g~~vgIvG~----G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
..-++|+|||+ |.+|..+++.| +..|.+|+.+|+..... .+...+.+++|+....|
T Consensus 12 ~~p~~IavIGaS~~~g~~G~~~~~~L-~~~G~~V~~vnp~~~~i-------------------~G~~~~~s~~el~~~vD 71 (138)
T 1y81_A 12 KEFRKIALVGASKNPAKYGNIILKDL-LSKGFEVLPVNPNYDEI-------------------EGLKCYRSVRELPKDVD 71 (138)
T ss_dssp --CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSEE-------------------TTEECBSSGGGSCTTCC
T ss_pred cCCCeEEEEeecCCCCCHHHHHHHHH-HHCCCEEEEeCCCCCeE-------------------CCeeecCCHHHhCCCCC
Confidence 45678999999 99999999998 57788999888864220 11223568889888999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++++++| .+....++. +..+ ...++++++.+. ..++|.+.+++..+.
T Consensus 72 lvii~vp-~~~v~~v~~-~~~~-~g~~~i~~~~~~----~~~~l~~~a~~~Gi~ 118 (138)
T 1y81_A 72 VIVFVVP-PKVGLQVAK-EAVE-AGFKKLWFQPGA----ESEEIRRFLEKAGVE 118 (138)
T ss_dssp EEEECSC-HHHHHHHHH-HHHH-TTCCEEEECTTS----CCHHHHHHHHHHTCE
T ss_pred EEEEEeC-HHHHHHHHH-HHHH-cCCCEEEEcCcc----HHHHHHHHHHHCCCE
Confidence 9999999 466666653 3444 566777777754 257777777765443
No 145
>2dc1_A L-aspartate dehydrogenase; NAD, oxidoreductase; HET: CIT NAD; 1.90A {Archaeoglobus fulgidus}
Probab=98.09 E-value=7.3e-06 Score=75.30 Aligned_cols=97 Identities=23% Similarity=0.241 Sum_probs=71.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh-hhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiVvl~ 243 (386)
++|||||+|.||+.+++.|. .-|+++ .+||++... .. .+.++++++ .++|+|++|
T Consensus 1 m~vgiIG~G~mG~~~~~~l~-~~g~~lv~v~d~~~~~------------------~~----~~~~~~~l~~~~~DvVv~~ 57 (236)
T 2dc1_A 1 MLVGLIGYGAIGKFLAEWLE-RNGFEIAAILDVRGEH------------------EK----MVRGIDEFLQREMDVAVEA 57 (236)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCCC------------------TT----EESSHHHHTTSCCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHh-cCCCEEEEEEecCcch------------------hh----hcCCHHHHhcCCCCEEEEC
Confidence 37999999999999999874 678887 688876421 00 246889999 699999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde---~aL~~aL~~g~ 290 (386)
+|... .. +.....++.|..+++.+.+..-+. +.|.++.++..
T Consensus 58 ~~~~~-~~----~~~~~~l~~G~~vv~~~~~~~~~~~~~~~l~~~a~~~g 102 (236)
T 2dc1_A 58 ASQQA-VK----DYAEKILKAGIDLIVLSTGAFADRDFLSRVREVCRKTG 102 (236)
T ss_dssp SCHHH-HH----HHHHHHHHTTCEEEESCGGGGGSHHHHHHHHHHHHHHC
T ss_pred CCHHH-HH----HHHHHHHHCCCcEEEECcccCChHHHHHHHHHHHHhcC
Confidence 99421 11 223455678999999988876655 67777776543
No 146
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=98.08 E-value=1.2e-05 Score=80.76 Aligned_cols=110 Identities=19% Similarity=0.228 Sum_probs=74.1
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHH---------
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV--------- 233 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el--------- 233 (386)
-+|+++.|||+|.+|..+|..|+ ..|.+|++||+++..... +.. +..+. ....++|+
T Consensus 9 ~~~~~~~ViGlGyvGlp~A~~La-~~G~~V~~~D~~~~kv~~---------L~~-g~~pi---~epgl~~ll~~~~~~g~ 74 (431)
T 3ojo_A 9 HHGSKLTVVGLGYIGLPTSIMFA-KHGVDVLGVDINQQTIDK---------LQN-GQISI---EEPGLQEVYEEVLSSGK 74 (431)
T ss_dssp ---CEEEEECCSTTHHHHHHHHH-HTTCEEEEECSCHHHHHH---------HHT-TCCSS---CCTTHHHHHHHHHHTTC
T ss_pred ccCCccEEEeeCHHHHHHHHHHH-HCCCEEEEEECCHHHHHH---------HHC-CCCCc---CCCCHHHHHHhhcccCc
Confidence 57889999999999999999985 679999999998764321 111 11111 11222222
Q ss_pred ------hhhCCEEEEccCCChhh--------hhcc--cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 016620 234 ------LREADVISLHPVLDKTT--------YHLI--NKERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (386)
Q Consensus 234 ------l~~aDiVvl~lPlt~~t--------~~li--~~~~~~~mk~gailIN~aRg~~vde~aL~~aL 286 (386)
+++||+|++|+|...+. ..+. .+...+.+++|+++|+.|.-.+--.+.+.+.+
T Consensus 75 l~~ttd~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 75 LKVSTTPEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp EEEESSCCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred eEEeCchhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 35799999999965421 1232 24567789999999999988776677776654
No 147
>3hdj_A Probable ornithine cyclodeaminase; APC62486, bordetella pertussis TOH structural genomics, PSI-2, protein structure initiative; 1.70A {Bordetella pertussis}
Probab=98.08 E-value=1.7e-05 Score=76.31 Aligned_cols=96 Identities=19% Similarity=0.311 Sum_probs=66.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
..++++|||.|.+|+.+++.|+..++ -+|.+|||+ +. +++.+.+. ...+ ...... ++++++++||+|++
T Consensus 120 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~-~a--~~la~~l~---~~~g---~~~~~~-~~~eav~~aDIVi~ 189 (313)
T 3hdj_A 120 RSSVLGLFGAGTQGAEHAAQLSARFALEAILVHDPY-AS--PEILERIG---RRCG---VPARMA-APADIAAQADIVVT 189 (313)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECTT-CC--HHHHHHHH---HHHT---SCEEEC-CHHHHHHHCSEEEE
T ss_pred CCcEEEEECccHHHHHHHHHHHHhCCCcEEEEECCc-HH--HHHHHHHH---HhcC---CeEEEe-CHHHHHhhCCEEEE
Confidence 46789999999999999998754344 489999998 32 22211110 0011 112234 89999999999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
|+|.. ..++.. ..+++|+.++++|...
T Consensus 190 aT~s~---~pvl~~---~~l~~G~~V~~vGs~~ 216 (313)
T 3hdj_A 190 ATRST---TPLFAG---QALRAGAFVGAIGSSL 216 (313)
T ss_dssp CCCCS---SCSSCG---GGCCTTCEEEECCCSS
T ss_pred ccCCC---CcccCH---HHcCCCcEEEECCCCC
Confidence 99963 455554 3589999999998743
No 148
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=98.04 E-value=6.1e-06 Score=78.15 Aligned_cols=116 Identities=18% Similarity=0.186 Sum_probs=69.4
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCC-CCccccccCCHHHHhh---hCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVTWKRASSMDEVLR---EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~l~ell~---~aDiVv 241 (386)
++|+|||+|.||..+|..|+ ..|.+|++||++.... +...+. +-.....+. ..... ...+.+++.+ .+|+|+
T Consensus 4 m~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~~~~-~~~~~~-g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi 79 (316)
T 2ew2_A 4 MKIAIAGAGAMGSRLGIMLH-QGGNDVTLIDQWPAHI-EAIRKN-GLIADFNGEEVVANL-PIFSPEEIDHQNEQVDLII 79 (316)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSCHHHH-HHHHHH-CEEEEETTEEEEECC-CEECGGGCCTTSCCCSEEE
T ss_pred CeEEEECcCHHHHHHHHHHH-hCCCcEEEEECCHHHH-HHHHhC-CEEEEeCCCeeEecc-eeecchhhcccCCCCCEEE
Confidence 58999999999999999984 6788999999976432 111110 000000000 00000 0112334443 899999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
+|+|. ..+..++ ++....+++++++|+++.|-- ..+.+.+.+..
T Consensus 80 ~~v~~-~~~~~v~-~~l~~~l~~~~~iv~~~~g~~-~~~~l~~~~~~ 123 (316)
T 2ew2_A 80 ALTKA-QQLDAMF-KAIQPMITEKTYVLCLLNGLG-HEDVLEKYVPK 123 (316)
T ss_dssp ECSCH-HHHHHHH-HHHGGGCCTTCEEEECCSSSC-THHHHTTTSCG
T ss_pred EEecc-ccHHHHH-HHHHHhcCCCCEEEEecCCCC-cHHHHHHHcCC
Confidence 99994 3445544 445567889999999987532 33555555544
No 149
>1z82_A Glycerol-3-phosphate dehydrogenase; TM0378, structural genom joint center for structural genomics, JCSG, protein structu initiative, PSI; HET: MSE NDP G3H G3P; 2.00A {Thermotoga maritima}
Probab=98.03 E-value=8e-06 Score=78.90 Aligned_cols=93 Identities=17% Similarity=0.359 Sum_probs=63.9
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC------ccccccCCHHHHhhhCC
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP------VTWKRASSMDEVLREAD 238 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~l~ell~~aD 238 (386)
..+|+|||+|.||..+|..|+ .-|.+|.+|+|+.... +. +...+... .......++++ +..+|
T Consensus 14 ~~kI~iIG~G~mG~ala~~L~-~~G~~V~~~~r~~~~~-~~--------l~~~g~~~~~~~~~~~~~~~~~~~~-~~~aD 82 (335)
T 1z82_A 14 EMRFFVLGAGSWGTVFAQMLH-ENGEEVILWARRKEIV-DL--------INVSHTSPYVEESKITVRATNDLEE-IKKED 82 (335)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSHHHH-HH--------HHHHSCBTTBTTCCCCSEEESCGGG-CCTTE
T ss_pred CCcEEEECcCHHHHHHHHHHH-hCCCeEEEEeCCHHHH-HH--------HHHhCCcccCCCCeeeEEEeCCHHH-hcCCC
Confidence 457999999999999999985 5689999999986432 11 11111100 01223457778 88999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCC-CCcEEEEcCCC
Q 016620 239 VISLHPVLDKTTYHLINKERLATMK-KEAILVNCSRG 274 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk-~gailIN~aRg 274 (386)
+|++++|. ..+..++ ..++ ++.++|+++-|
T Consensus 83 vVil~vk~-~~~~~v~-----~~l~~~~~~vv~~~nG 113 (335)
T 1z82_A 83 ILVIAIPV-QYIREHL-----LRLPVKPSMVLNLSKG 113 (335)
T ss_dssp EEEECSCG-GGHHHHH-----TTCSSCCSEEEECCCC
T ss_pred EEEEECCH-HHHHHHH-----HHhCcCCCEEEEEeCC
Confidence 99999994 4444443 3343 78899999876
No 150
>4huj_A Uncharacterized protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, dinucleotide-binding; 1.77A {Sinorhizobium meliloti}
Probab=98.02 E-value=7.4e-06 Score=74.50 Aligned_cols=93 Identities=22% Similarity=0.225 Sum_probs=60.3
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
-++|+|||+|.||+.+|+.|+ ..|.+|.+ +||+..... .....+ +. ....+..+.++++|+|+++
T Consensus 23 mmkI~IIG~G~mG~~la~~l~-~~g~~V~~v~~r~~~~~~-~l~~~~-------g~-----~~~~~~~~~~~~aDvVila 88 (220)
T 4huj_A 23 MTTYAIIGAGAIGSALAERFT-AAQIPAIIANSRGPASLS-SVTDRF-------GA-----SVKAVELKDALQADVVILA 88 (220)
T ss_dssp SCCEEEEECHHHHHHHHHHHH-HTTCCEEEECTTCGGGGH-HHHHHH-------TT-----TEEECCHHHHTTSSEEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCEEEEEECCCHHHHH-HHHHHh-------CC-----CcccChHHHHhcCCEEEEe
Confidence 368999999999999999984 67889998 998865422 111111 11 1122445668899999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+|. .....++.. +.. .++.++|+++-|-
T Consensus 89 vp~-~~~~~v~~~--l~~-~~~~ivi~~~~g~ 116 (220)
T 4huj_A 89 VPY-DSIADIVTQ--VSD-WGGQIVVDASNAI 116 (220)
T ss_dssp SCG-GGHHHHHTT--CSC-CTTCEEEECCCCB
T ss_pred CCh-HHHHHHHHH--hhc-cCCCEEEEcCCCC
Confidence 993 222332211 112 3578999998653
No 151
>1ks9_A KPA reductase;, 2-dehydropantoate 2-reductase; PANE, APBA, ketopantoate reductase, rossman fold, monomer, APO, oxidoreductase; 1.70A {Escherichia coli} SCOP: a.100.1.7 c.2.1.6 PDB: 1yon_A* 1yjq_A* 2ofp_A*
Probab=98.02 E-value=5.4e-06 Score=77.70 Aligned_cols=97 Identities=10% Similarity=0.079 Sum_probs=65.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc--cc-cccCCHHHHhhhCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TW-KRASSMDEVLREADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-~~~~~l~ell~~aDiVvl 242 (386)
++|+|||+|.||..+|..|+ ..|.+|.+|||+.... +. +...+..+. .. ....+ .+.++.+|+|++
T Consensus 1 m~i~iiG~G~~G~~~a~~l~-~~g~~V~~~~r~~~~~-~~--------l~~~~~~~~~~~~~~~~~~-~~~~~~~d~vi~ 69 (291)
T 1ks9_A 1 MKITVLGCGALGQLWLTALC-KQGHEVQGWLRVPQPY-CS--------VNLVETDGSIFNESLTAND-PDFLATSDLLLV 69 (291)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEECSSCCSE-EE--------EEEECTTSCEEEEEEEESC-HHHHHTCSEEEE
T ss_pred CeEEEECcCHHHHHHHHHHH-hCCCCEEEEEcCccce-ee--------EEEEcCCCceeeeeeeecC-ccccCCCCEEEE
Confidence 47999999999999999984 6788999999876431 10 111111110 00 01233 467789999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
++|.. .+..++ ++....+++++++|++..|-
T Consensus 70 ~v~~~-~~~~v~-~~l~~~l~~~~~vv~~~~g~ 100 (291)
T 1ks9_A 70 TLKAW-QVSDAV-KSLASTLPVTTPILLIHNGM 100 (291)
T ss_dssp CSCGG-GHHHHH-HHHHTTSCTTSCEEEECSSS
T ss_pred EecHH-hHHHHH-HHHHhhCCCCCEEEEecCCC
Confidence 99964 345544 45566788899999986653
No 152
>1x7d_A Ornithine cyclodeaminase; binds NAD+, binds L-ornithine, binds L-proline, 2 bundle, beta barrel, rossmann fold, lyase; HET: NAD ORN MES; 1.60A {Pseudomonas putida} SCOP: c.2.1.13 PDB: 1u7h_A*
Probab=98.01 E-value=2.5e-05 Score=76.23 Aligned_cols=100 Identities=18% Similarity=0.240 Sum_probs=69.1
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
.+++++|||.|.+|+.+++.+....+ .+|.+|||+.... +++.+.+ ... .+.....+.++++++++||+|++
T Consensus 128 ~~~~v~iIGaG~~a~~~a~al~~~~~~~~V~V~~r~~~~a-~~la~~~----~~~--~g~~~~~~~~~~eav~~aDiVi~ 200 (350)
T 1x7d_A 128 NARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLAT-AKLIANL----KEY--SGLTIRRASSVAEAVKGVDIITT 200 (350)
T ss_dssp TCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHH-HHHHHHH----TTC--TTCEEEECSSHHHHHTTCSEEEE
T ss_pred cCCeEEEECCcHHHHHHHHHHHHhCCCcEEEEEcCCHHHH-HHHHHHH----Hhc--cCceEEEeCCHHHHHhcCCEEEE
Confidence 56789999999999999987643344 5899999987542 2222221 110 01112345789999999999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
|+|.. ....++.. ..+++|..+++++..
T Consensus 201 aTps~-~~~pvl~~---~~l~~G~~V~~vgs~ 228 (350)
T 1x7d_A 201 VTADK-AYATIITP---DMLEPGMHLNAVGGD 228 (350)
T ss_dssp CCCCS-SEEEEECG---GGCCTTCEEEECSCC
T ss_pred eccCC-CCCceecH---HHcCCCCEEEECCCC
Confidence 99975 22345543 457899999999863
No 153
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.98 E-value=5.6e-06 Score=72.65 Aligned_cols=100 Identities=11% Similarity=0.131 Sum_probs=64.1
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHH--h
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV--L 234 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el--l 234 (386)
.++.+++|+|+|+|.+|+.+|+.| +.. |.+|+++|++...... ++..+.... .....+ ++++ +
T Consensus 35 ~~~~~~~v~IiG~G~~G~~~a~~L-~~~~g~~V~vid~~~~~~~~---------~~~~g~~~~-~gd~~~~~~l~~~~~~ 103 (183)
T 3c85_A 35 INPGHAQVLILGMGRIGTGAYDEL-RARYGKISLGIEIREEAAQQ---------HRSEGRNVI-SGDATDPDFWERILDT 103 (183)
T ss_dssp BCCTTCSEEEECCSHHHHHHHHHH-HHHHCSCEEEEESCHHHHHH---------HHHTTCCEE-ECCTTCHHHHHTBCSC
T ss_pred cCCCCCcEEEECCCHHHHHHHHHH-HhccCCeEEEEECCHHHHHH---------HHHCCCCEE-EcCCCCHHHHHhccCC
Confidence 357788999999999999999998 577 9999999998754211 112221111 001122 3343 6
Q ss_pred hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 235 ~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.++|+|++++|....+..++ ..++.+.+...++..+.
T Consensus 104 ~~ad~vi~~~~~~~~~~~~~--~~~~~~~~~~~ii~~~~ 140 (183)
T 3c85_A 104 GHVKLVLLAMPHHQGNQTAL--EQLQRRNYKGQIAAIAE 140 (183)
T ss_dssp CCCCEEEECCSSHHHHHHHH--HHHHHTTCCSEEEEEES
T ss_pred CCCCEEEEeCCChHHHHHHH--HHHHHHCCCCEEEEEEC
Confidence 78999999999654444332 35556666666665433
No 154
>3dfu_A Uncharacterized protein from 6-phosphogluconate dehydrogenase-like family; putative rossmann-like dehydrogenase, structural genomics; HET: MSE; 2.07A {Corynebacterium glutamicum}
Probab=97.96 E-value=8.4e-06 Score=75.06 Aligned_cols=71 Identities=10% Similarity=0.137 Sum_probs=55.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.-++|||||+|.||.++|+.| +..|.+|.+|++. ++ +.+|| +++
T Consensus 5 ~~mkI~IIG~G~~G~sLA~~L-~~~G~~V~~~~~~--------------------------------~~-~~~aD--ila 48 (232)
T 3dfu_A 5 PRLRVGIFDDGSSTVNMAEKL-DSVGHYVTVLHAP--------------------------------ED-IRDFE--LVV 48 (232)
T ss_dssp CCCEEEEECCSCCCSCHHHHH-HHTTCEEEECSSG--------------------------------GG-GGGCS--EEE
T ss_pred CCcEEEEEeeCHHHHHHHHHH-HHCCCEEEEecCH--------------------------------HH-hccCC--EEE
Confidence 346899999999999999998 5679999999862 11 46799 888
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~a 272 (386)
+|.. ....++ .+....+++|+++++++
T Consensus 49 vP~~-ai~~vl-~~l~~~l~~g~ivvd~s 75 (232)
T 3dfu_A 49 IDAH-GVEGYV-EKLSAFARRGQMFLHTS 75 (232)
T ss_dssp ECSS-CHHHHH-HHHHTTCCTTCEEEECC
T ss_pred EcHH-HHHHHH-HHHHHhcCCCCEEEEEC
Confidence 9975 555555 55666789999999975
No 155
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=97.94 E-value=5.9e-05 Score=64.38 Aligned_cols=104 Identities=16% Similarity=0.182 Sum_probs=61.6
Q ss_pred cccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhh-hcCCCCccccccCC---HHHH-
Q 016620 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGEQPVTWKRASS---MDEV- 233 (386)
Q Consensus 159 ~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~---l~el- 233 (386)
+.....+++|.|+|+|.+|+.+|+.| +..|.+|+++|++...... ++ ..+.. .......+ +.+.
T Consensus 13 ~~~~~~~~~v~IiG~G~iG~~la~~L-~~~g~~V~vid~~~~~~~~---------~~~~~g~~-~~~~d~~~~~~l~~~~ 81 (155)
T 2g1u_A 13 MSKKQKSKYIVIFGCGRLGSLIANLA-SSSGHSVVVVDKNEYAFHR---------LNSEFSGF-TVVGDAAEFETLKECG 81 (155)
T ss_dssp ----CCCCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGGGG---------SCTTCCSE-EEESCTTSHHHHHTTT
T ss_pred hhcccCCCcEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHHHH---------HHhcCCCc-EEEecCCCHHHHHHcC
Confidence 33567889999999999999999998 5789999999987654210 11 11110 00001122 2222
Q ss_pred hhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 234 LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 234 l~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+..+|+|++++|....+. .-......+.+...++-..++.
T Consensus 82 ~~~ad~Vi~~~~~~~~~~--~~~~~~~~~~~~~~iv~~~~~~ 121 (155)
T 2g1u_A 82 MEKADMVFAFTNDDSTNF--FISMNARYMFNVENVIARVYDP 121 (155)
T ss_dssp GGGCSEEEECSSCHHHHH--HHHHHHHHTSCCSEEEEECSSG
T ss_pred cccCCEEEEEeCCcHHHH--HHHHHHHHHCCCCeEEEEECCH
Confidence 578999999999633222 2233444445555666555554
No 156
>2duw_A Putative COA-binding protein; ligand binding protein; NMR {Klebsiella pneumoniae}
Probab=97.94 E-value=5.7e-06 Score=70.64 Aligned_cols=101 Identities=10% Similarity=0.151 Sum_probs=72.3
Q ss_pred CCeEEEEec----ChhHHHHHHHHHhcCCcEEEEEcCCh--hhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 165 g~~vgIvG~----G~IG~~iA~~L~~~fg~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
-++|+|||+ |.+|..+++.| +..|.+|+.+|+.. .. . .+...+.+++|+....|
T Consensus 13 p~~IavIGas~~~g~~G~~~~~~L-~~~G~~v~~vnp~~~g~~-----------------i--~G~~~~~sl~el~~~~D 72 (145)
T 2duw_A 13 TRTIALVGASDKPDRPSYRVMKYL-LDQGYHVIPVSPKVAGKT-----------------L--LGQQGYATLADVPEKVD 72 (145)
T ss_dssp CCCEEEESCCSCTTSHHHHHHHHH-HHHTCCEEEECSSSTTSE-----------------E--TTEECCSSTTTCSSCCS
T ss_pred CCEEEEECcCCCCCChHHHHHHHH-HHCCCEEEEeCCcccccc-----------------c--CCeeccCCHHHcCCCCC
Confidence 567999999 89999999998 56778899988865 21 0 11223467888888999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++++++|. +....++. +..+ ...++++++.+. . ++++.+++++..+.
T Consensus 73 lvii~vp~-~~v~~v~~-~~~~-~g~~~i~i~~~~--~--~~~l~~~a~~~Gi~ 119 (145)
T 2duw_A 73 MVDVFRNS-EAAWGVAQ-EAIA-IGAKTLWLQLGV--I--NEQAAVLAREAGLS 119 (145)
T ss_dssp EEECCSCS-THHHHHHH-HHHH-HTCCEEECCTTC--C--CHHHHHHHHTTTCE
T ss_pred EEEEEeCH-HHHHHHHH-HHHH-cCCCEEEEcCCh--H--HHHHHHHHHHcCCE
Confidence 99999994 56666663 3444 556777777642 2 67888888876543
No 157
>2z2v_A Hypothetical protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} PDB: 3a63_A* 3abi_A*
Probab=97.89 E-value=1.1e-05 Score=79.30 Aligned_cols=114 Identities=17% Similarity=0.092 Sum_probs=71.6
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
+=++++|+|+|+|.||+.+|+.|+ .. .+|.++||+.+... +..+ .............+++++++++|+|+
T Consensus 13 ~~~~~~v~IiGaG~iG~~ia~~L~-~~-~~V~V~~R~~~~a~-~la~-------~~~~~~~d~~~~~~l~~ll~~~DvVI 82 (365)
T 2z2v_A 13 EGRHMKVLILGAGNIGRAIAWDLK-DE-FDVYIGDVNNENLE-KVKE-------FATPLKVDASNFDKLVEVMKEFELVI 82 (365)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHT-TT-SEEEEEESCHHHHH-HHTT-------TSEEEECCTTCHHHHHHHHTTCSCEE
T ss_pred cCCCCeEEEEcCCHHHHHHHHHHH-cC-CeEEEEECCHHHHH-HHHh-------hCCeEEEecCCHHHHHHHHhCCCEEE
Confidence 457889999999999999999985 44 89999999876532 1111 00000000112346788999999999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 291 (386)
+|+|..-. .. + ..+.++.|..+++++-- .-+..+|.+..++..+
T Consensus 83 n~~P~~~~-~~-v---~~a~l~~G~~~vD~s~~-~~~~~~l~~~Ak~aG~ 126 (365)
T 2z2v_A 83 GALPGFLG-FK-S---IKAAIKSKVDMVDVSFM-PENPLELRDEAEKAQV 126 (365)
T ss_dssp ECCCHHHH-HH-H---HHHHHHTTCCEEECCCC-SSCGGGGHHHHHHTTC
T ss_pred ECCChhhh-HH-H---HHHHHHhCCeEEEccCC-cHHHHHHHHHHHHcCC
Confidence 99984321 11 1 23445788889998752 3344567776666543
No 158
>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*
Probab=97.89 E-value=4.7e-05 Score=74.84 Aligned_cols=103 Identities=14% Similarity=0.223 Sum_probs=77.0
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCC----hhhH---HHHHHhhhhhhhhhcCCCCccccccCCHHH
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY----QATR---LEKFVTAYGQFLKANGEQPVTWKRASSMDE 232 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 232 (386)
+.+.+.+|.|+|.|..|..+|+.| .+.|. +|+.+|++ .... +..+-..|.. ... . .....+|+|
T Consensus 188 ~~l~~~kVVv~GAGaAG~~iAkll-~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~---~~~--~--~~~~~~L~e 259 (388)
T 1vl6_A 188 KKIEEVKVVVNGIGAAGYNIVKFL-LDLGVKNVVAVDRKGILNENDPETCLNEYHLEIAR---ITN--P--ERLSGDLET 259 (388)
T ss_dssp CCTTTCEEEEECCSHHHHHHHHHH-HHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHH---TSC--T--TCCCSCHHH
T ss_pred CCCCCcEEEEECCCHHHHHHHHHH-HhCCCCeEEEEECCCcccCCCcccccCHHHHHHHH---hhh--c--cCchhhHHH
Confidence 468999999999999999999997 57898 89999997 3221 1111122211 111 1 112468999
Q ss_pred HhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc
Q 016620 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV 276 (386)
Q Consensus 233 ll~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~ 276 (386)
.++.+|+++-+.- -++++++.++.|+++++++.+|+...
T Consensus 260 av~~ADVlIG~Sa-----p~l~t~emVk~Ma~~pIIfalSNPt~ 298 (388)
T 1vl6_A 260 ALEGADFFIGVSR-----GNILKPEWIKKMSRKPVIFALANPVP 298 (388)
T ss_dssp HHTTCSEEEECSC-----SSCSCHHHHTTSCSSCEEEECCSSSC
T ss_pred HHccCCEEEEeCC-----CCccCHHHHHhcCCCCEEEEcCCCCC
Confidence 9999999988842 38999999999999999999998654
No 159
>2i76_A Hypothetical protein; NADP, dehydrogenase, TM1727, structural genomics, PSI-2, protein structure initiative; HET: NDP; 3.00A {Thermotoga maritima} SCOP: a.100.1.10 c.2.1.6
Probab=97.85 E-value=8.4e-06 Score=76.67 Aligned_cols=88 Identities=13% Similarity=0.152 Sum_probs=54.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|||||+|.||+.+|+.|+ .. .+| .+||++..... ...+ ..+. ...+++++++++|+|++|+
T Consensus 3 m~I~iIG~G~mG~~la~~l~-~~-~~v~~v~~~~~~~~~-~~~~-------~~g~------~~~~~~~~~~~~DvVilav 66 (276)
T 2i76_A 3 LVLNFVGTGTLTRFFLECLK-DR-YEIGYILSRSIDRAR-NLAE-------VYGG------KAATLEKHPELNGVVFVIV 66 (276)
T ss_dssp -CCEEESCCHHHHHHHHTTC------CCCEECSSHHHHH-HHHH-------HTCC------CCCSSCCCCC---CEEECS
T ss_pred ceEEEEeCCHHHHHHHHHHH-Hc-CcEEEEEeCCHHHHH-HHHH-------HcCC------ccCCHHHHHhcCCEEEEeC
Confidence 47999999999999999874 34 788 58999865421 1111 1111 2346677788999999999
Q ss_pred CCChhhhhcccHHHHhcC-CCCcEEEEcCCCc
Q 016620 245 VLDKTTYHLINKERLATM-KKEAILVNCSRGP 275 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~m-k~gailIN~aRg~ 275 (386)
|... . .+.+..+ +++.++||++-+-
T Consensus 67 ~~~~-~-----~~v~~~l~~~~~ivi~~s~~~ 92 (276)
T 2i76_A 67 PDRY-I-----KTVANHLNLGDAVLVHCSGFL 92 (276)
T ss_dssp CTTT-H-----HHHHTTTCCSSCCEEECCSSS
T ss_pred ChHH-H-----HHHHHHhccCCCEEEECCCCC
Confidence 9643 2 3344444 6889999998553
No 160
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=97.84 E-value=3.7e-05 Score=72.36 Aligned_cols=106 Identities=16% Similarity=0.013 Sum_probs=68.8
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
|+++.|+|.|.+|++++..| ...|.+|++++|+..+..+ .. . .+ .... +++++ .++|+|+.++
T Consensus 118 ~k~vlvlGaGGaaraia~~L-~~~G~~v~V~nRt~~ka~~-la-~-------~~---~~~~---~~~~l-~~~DiVInaT 180 (269)
T 3phh_A 118 YQNALILGAGGSAKALACEL-KKQGLQVSVLNRSSRGLDF-FQ-R-------LG---CDCF---MEPPK-SAFDLIINAT 180 (269)
T ss_dssp CCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSCTTHHH-HH-H-------HT---CEEE---SSCCS-SCCSEEEECC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH-HH-H-------CC---CeEe---cHHHh-ccCCEEEEcc
Confidence 88999999999999999998 5778999999998765321 11 1 11 1111 22222 3899999999
Q ss_pred CCChhhhhcccHHHHh-cCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 245 VLDKTTYHLINKERLA-TMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 245 Plt~~t~~li~~~~~~-~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
|..-.....+..+.+. .++++.+++|+...+ .+.-|..|-+.|
T Consensus 181 p~Gm~~~~~l~~~~l~~~l~~~~~v~D~vY~P--~T~ll~~A~~~G 224 (269)
T 3phh_A 181 SASLHNELPLNKEVLKGYFKEGKLAYDLAYGF--LTPFLSLAKELK 224 (269)
T ss_dssp TTCCCCSCSSCHHHHHHHHHHCSEEEESCCSS--CCHHHHHHHHTT
T ss_pred cCCCCCCCCCChHHHHhhCCCCCEEEEeCCCC--chHHHHHHHHCc
Confidence 9753222345555332 567788888888875 555333444433
No 161
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=97.84 E-value=0.0001 Score=60.83 Aligned_cols=95 Identities=13% Similarity=0.178 Sum_probs=57.5
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHH---H-hhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE---V-LREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e---l-l~~aDiV 240 (386)
+++|+|+|+|.+|+.+|+.| ...|.+|.++|++.... +.... ..+.. .......+.+. . +.++|+|
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L-~~~g~~v~~~d~~~~~~-~~~~~-------~~~~~-~~~~d~~~~~~l~~~~~~~~d~v 73 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSL-SEKGHDIVLIDIDKDIC-KKASA-------EIDAL-VINGDCTKIKTLEDAGIEDADMY 73 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHH-HHHHH-------HCSSE-EEESCTTSHHHHHHTTTTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHH-HHHHH-------hcCcE-EEEcCCCCHHHHHHcCcccCCEE
Confidence 57899999999999999998 56799999999876532 11110 00110 00001122222 2 5789999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~ 271 (386)
++++|....+ ..-....+.++++.+++-+
T Consensus 74 i~~~~~~~~~--~~~~~~~~~~~~~~ii~~~ 102 (140)
T 1lss_A 74 IAVTGKEEVN--LMSSLLAKSYGINKTIARI 102 (140)
T ss_dssp EECCSCHHHH--HHHHHHHHHTTCCCEEEEC
T ss_pred EEeeCCchHH--HHHHHHHHHcCCCEEEEEe
Confidence 9999864322 2223445567777666544
No 162
>1omo_A Alanine dehydrogenase; two-domain, beta-sandwich-dimer, rossmann-fold NAD domain, human MU crystallin homolog; HET: NAD; 2.32A {Archaeoglobus fulgidus} SCOP: c.2.1.13 PDB: 1vll_A
Probab=97.79 E-value=5.9e-05 Score=72.73 Aligned_cols=94 Identities=15% Similarity=0.215 Sum_probs=66.1
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
..++++|||.|.+|+.+++.|++..+ .+|.+|||+.... +++.+.+. ..+ .... +.++++++ ++|+|++
T Consensus 124 ~~~~v~iIGaG~~a~~~~~al~~~~~~~~V~v~~r~~~~a-~~la~~~~----~~~---~~~~-~~~~~e~v-~aDvVi~ 193 (322)
T 1omo_A 124 NSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAA-KKFVSYCE----DRG---ISAS-VQPAEEAS-RCDVLVT 193 (322)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHH-HHHHHHHH----HTT---CCEE-ECCHHHHT-SSSEEEE
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCccEEEEECCCHHHH-HHHHHHHH----hcC---ceEE-ECCHHHHh-CCCEEEE
Confidence 46789999999999999998754343 5799999987542 23322221 111 1123 57899999 9999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+|.. ..++.. ..+++|..+++++.
T Consensus 194 aTp~~---~pv~~~---~~l~~G~~V~~ig~ 218 (322)
T 1omo_A 194 TTPSR---KPVVKA---EWVEEGTHINAIGA 218 (322)
T ss_dssp CCCCS---SCCBCG---GGCCTTCEEEECSC
T ss_pred eeCCC---CceecH---HHcCCCeEEEECCC
Confidence 99963 355543 45789999999954
No 163
>2qrj_A Saccharopine dehydrogenase, NAD+, L-lysine- forming; sulfate, rossmann fold, alpha-aminoadipate pathway, fungal lysine biosynthesis; 1.60A {Saccharomyces cerevisiae} PDB: 2qrk_A* 2qrl_A* 2q99_A 3ugk_A 3uh1_A* 3uha_A*
Probab=97.75 E-value=3.2e-05 Score=76.33 Aligned_cols=83 Identities=28% Similarity=0.440 Sum_probs=68.0
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCc---EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKM---NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~---~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
...+|.|||. |..|+..++.+ +++|+ .|.++|.+...+ +. .++ .+.++|+
T Consensus 213 ~~~kV~ViG~~G~vG~~A~~~a-~~lGa~~~~V~v~D~~~~~~---------------g~---------~~~-~i~~aDi 266 (394)
T 2qrj_A 213 RKPTVLIIGALGRCGSGAIDLL-HKVGIPDANILKWDIKETSR---------------GG---------PFD-EIPQADI 266 (394)
T ss_dssp CCCCEEEETTTSHHHHHHHHHH-HHTTCCGGGEEEECHHHHTT---------------CS---------CCT-HHHHSSE
T ss_pred CCCeEEEEcCCCHHHHHHHHHH-HhCCCCcCceEEeecccccc---------------CC---------chh-hHhhCCE
Confidence 4568999999 99999999986 79998 899999764220 10 123 3568999
Q ss_pred EEEccCCChhhhhcccHHHHhcC-CCCcEEEEcC
Q 016620 240 ISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~m-k~gailIN~a 272 (386)
|+.|+......-.+|+++.++.| |+|+++||+|
T Consensus 267 vIn~vlig~~aP~Lvt~e~v~~m~k~gsVIVDVA 300 (394)
T 2qrj_A 267 FINCIYLSKPIAPFTNMEKLNNPNRRLRTVVDVS 300 (394)
T ss_dssp EEECCCCCSSCCCSCCHHHHCCTTCCCCEEEETT
T ss_pred EEECcCcCCCCCcccCHHHHhcCcCCCeEEEEEe
Confidence 99999987667789999999999 9999999996
No 164
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=97.67 E-value=0.0001 Score=61.90 Aligned_cols=93 Identities=15% Similarity=0.180 Sum_probs=58.8
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHH-hhhCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiVv 241 (386)
.+|.|+|+|.+|+.+|+.| +..|.+|+++|+++..... ++..+... ......+ ++++ +.++|+|+
T Consensus 8 ~~viIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~~~---------~~~~g~~~-i~gd~~~~~~l~~a~i~~ad~vi 76 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKL-LASDIPLVVIETSRTRVDE---------LRERGVRA-VLGNAANEEIMQLAHLECAKWLI 76 (140)
T ss_dssp SCEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHHHH---------HHHTTCEE-EESCTTSHHHHHHTTGGGCSEEE
T ss_pred CCEEEECcCHHHHHHHHHH-HHCCCCEEEEECCHHHHHH---------HHHcCCCE-EECCCCCHHHHHhcCcccCCEEE
Confidence 4799999999999999998 6889999999998754211 11112111 0011122 2222 46899999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~ 271 (386)
+++|.+.++..++ ..++.+.++..+|-.
T Consensus 77 ~~~~~~~~n~~~~--~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 77 LTIPNGYEAGEIV--ASARAKNPDIEIIAR 104 (140)
T ss_dssp ECCSCHHHHHHHH--HHHHHHCSSSEEEEE
T ss_pred EECCChHHHHHHH--HHHHHHCCCCeEEEE
Confidence 9999765554332 345555566666543
No 165
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=97.66 E-value=4.7e-05 Score=72.27 Aligned_cols=115 Identities=14% Similarity=0.091 Sum_probs=67.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcC-----C-cEEEEEcCChhhHHHHHHhhhhhhhhh-cCC-CCccccccCCHHHHhhhC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGF-----K-MNLIYYDLYQATRLEKFVTAYGQFLKA-NGE-QPVTWKRASSMDEVLREA 237 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~f-----g-~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~l~ell~~a 237 (386)
++|+|||+|.||..+|..|+ .. | .+|++|+| .. ..+...+..+-.... .+. .........+ .+.+..+
T Consensus 9 m~I~iiG~G~mG~~~a~~L~-~~~~~~~g~~~V~~~~r-~~-~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 84 (317)
T 2qyt_A 9 IKIAVFGLGGVGGYYGAMLA-LRAAATDGLLEVSWIAR-GA-HLEAIRAAGGLRVVTPSRDFLARPTCVTDN-PAEVGTV 84 (317)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HHHHHTTSSEEEEEECC-HH-HHHHHHHHTSEEEECSSCEEEECCSEEESC-HHHHCCE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCccccCCCCCEEEEEc-HH-HHHHHHhcCCeEEEeCCCCeEEecceEecC-ccccCCC
Confidence 47999999999999999985 44 7 89999998 42 222211100000000 000 0000001123 3457889
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHH
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLK 287 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~ 287 (386)
|+|++|+|... +..++ ++....+++++++|++.-| +-.++.|.+.+.
T Consensus 85 D~vil~vk~~~-~~~v~-~~i~~~l~~~~~iv~~~nG-~~~~~~l~~~l~ 131 (317)
T 2qyt_A 85 DYILFCTKDYD-MERGV-AEIRPMIGQNTKILPLLNG-ADIAERMRTYLP 131 (317)
T ss_dssp EEEEECCSSSC-HHHHH-HHHGGGEEEEEEEEECSCS-SSHHHHHTTTSC
T ss_pred CEEEEecCccc-HHHHH-HHHHhhcCCCCEEEEccCC-CCcHHHHHHHCC
Confidence 99999999644 34443 3444557788999998776 222345555553
No 166
>3ghy_A Ketopantoate reductase protein; oxidoreductase, NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 2.00A {Ralstonia solanacearum}
Probab=97.63 E-value=4.7e-05 Score=73.53 Aligned_cols=103 Identities=14% Similarity=0.117 Sum_probs=64.3
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh-cCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.++|+|||.|.||..+|..|+ ..|.+|.+|+|.. ..+...+ .+-.... .+..........++++ +..+|+|++|
T Consensus 3 ~mkI~IiGaG~~G~~~a~~L~-~~g~~V~~~~r~~--~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~Vila 77 (335)
T 3ghy_A 3 LTRICIVGAGAVGGYLGARLA-LAGEAINVLARGA--TLQALQT-AGLRLTEDGATHTLPVRATHDAAA-LGEQDVVIVA 77 (335)
T ss_dssp CCCEEEESCCHHHHHHHHHHH-HTTCCEEEECCHH--HHHHHHH-TCEEEEETTEEEEECCEEESCHHH-HCCCSEEEEC
T ss_pred CCEEEEECcCHHHHHHHHHHH-HCCCEEEEEEChH--HHHHHHH-CCCEEecCCCeEEEeeeEECCHHH-cCCCCEEEEe
Confidence 368999999999999999985 5688999999842 2221110 0000000 0000001112346666 5889999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
+|. .++..++ ++....+++++++|.+.-|
T Consensus 78 vk~-~~~~~~~-~~l~~~l~~~~~iv~~~nG 106 (335)
T 3ghy_A 78 VKA-PALESVA-AGIAPLIGPGTCVVVAMNG 106 (335)
T ss_dssp CCH-HHHHHHH-GGGSSSCCTTCEEEECCSS
T ss_pred CCc-hhHHHHH-HHHHhhCCCCCEEEEECCC
Confidence 995 3444443 2334456789999999888
No 167
>3ulk_A Ketol-acid reductoisomerase; branched-chain amino acid biosynthesis, rossmann fold, acetolactate, oxidoreductase; HET: CSX NDP; 2.30A {Escherichia coli} PDB: 1yrl_A*
Probab=97.63 E-value=0.00014 Score=72.26 Aligned_cols=100 Identities=20% Similarity=0.284 Sum_probs=70.1
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhh-H-HHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT-R-LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
.-|+||+|+|||||+-|.+=|..| +--|.+|++--|.... + ...+.. ..+.| + ...+.+|+++.||
T Consensus 33 ~~lkgK~IaVIGyGsQG~AqAlNL-RDSGv~V~Vglr~~s~~e~~~S~~~-----A~~~G-----f-~v~~~~eA~~~AD 100 (491)
T 3ulk_A 33 SYLQGKKVVIVGCGAQGLNQGLNM-RDSGLDISYALRKEAIAEKRASWRK-----ATENG-----F-KVGTYEELIPQAD 100 (491)
T ss_dssp GGGTTSEEEEESCSHHHHHHHHHH-HHTTCEEEEEECHHHHHTTCHHHHH-----HHHTT-----C-EEEEHHHHGGGCS
T ss_pred HHHcCCEEEEeCCChHhHHHHhHH-HhcCCcEEEEeCCCCcccccchHHH-----HHHCC-----C-EecCHHHHHHhCC
Confidence 348999999999999999999998 6889998876542210 0 000000 11112 2 2357899999999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+|.+.+|... ...++ ++....||+|+.|. .|+|=
T Consensus 101 vV~~L~PD~~-q~~vy-~~I~p~lk~G~~L~-faHGF 134 (491)
T 3ulk_A 101 LVINLTPDKQ-HSDVV-RTVQPLMKDGAALG-YSHGF 134 (491)
T ss_dssp EEEECSCGGG-HHHHH-HHHGGGSCTTCEEE-ESSCH
T ss_pred EEEEeCChhh-HHHHH-HHHHhhCCCCCEEE-ecCcc
Confidence 9999999643 33444 56999999999887 56664
No 168
>3hwr_A 2-dehydropantoate 2-reductase; YP_299159.1, PANE/APBA family ketopantoate reductase, struct genomics, joint center for structural genomics; HET: NDP BCN; 2.15A {Ralstonia eutropha}
Probab=97.60 E-value=0.00012 Score=70.33 Aligned_cols=116 Identities=18% Similarity=0.255 Sum_probs=68.5
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh-cCCCCccccccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
-..++|+|||.|.||..+|..|+ .-|.+|.+| ++... .+...+. +-.... ............++++ +..+|+|+
T Consensus 17 ~~~~kI~IiGaGa~G~~~a~~L~-~~G~~V~l~-~~~~~-~~~i~~~-g~~~~~~~~~~~~~~~~~~~~~~-~~~~D~vi 91 (318)
T 3hwr_A 17 FQGMKVAIMGAGAVGCYYGGMLA-RAGHEVILI-ARPQH-VQAIEAT-GLRLETQSFDEQVKVSASSDPSA-VQGADLVL 91 (318)
T ss_dssp ---CEEEEESCSHHHHHHHHHHH-HTTCEEEEE-CCHHH-HHHHHHH-CEEEECSSCEEEECCEEESCGGG-GTTCSEEE
T ss_pred ccCCcEEEECcCHHHHHHHHHHH-HCCCeEEEE-EcHhH-HHHHHhC-CeEEEcCCCcEEEeeeeeCCHHH-cCCCCEEE
Confidence 35578999999999999999985 568899999 65432 2211110 000000 0000011111245544 58899999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL 286 (386)
+++|.. ++...+ ++....+++++++|.+.-|=- .++.|.+.+
T Consensus 92 lavk~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~-~~~~l~~~~ 133 (318)
T 3hwr_A 92 FCVKST-DTQSAA-LAMKPALAKSALVLSLQNGVE-NADTLRSLL 133 (318)
T ss_dssp ECCCGG-GHHHHH-HHHTTTSCTTCEEEEECSSSS-HHHHHHHHC
T ss_pred EEcccc-cHHHHH-HHHHHhcCCCCEEEEeCCCCC-cHHHHHHHc
Confidence 999964 444444 444556788999999877632 234555555
No 169
>3i83_A 2-dehydropantoate 2-reductase; structural genomics, oxidoreductase, NADP, pantothenate BIOS PSI-2, protein structure initiative; 1.90A {Methylococcus capsulatus}
Probab=97.59 E-value=0.00012 Score=70.10 Aligned_cols=119 Identities=15% Similarity=0.118 Sum_probs=74.1
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh--cCCCCc-cccccCCHHHHhhhCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA--NGEQPV-TWKRASSMDEVLREADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~~~~~l~ell~~aDiVvl 242 (386)
++|+|||.|.||..+|..|+ .-|.+|.+|+|+......+. .. .... .+.... ......+++++.+.+|+|++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~~~i~~~--Gl--~~~~~~~g~~~~~~~~~~~~~~~~~~~~DlVil 77 (320)
T 3i83_A 3 LNILVIGTGAIGSFYGALLA-KTGHCVSVVSRSDYETVKAK--GI--RIRSATLGDYTFRPAAVVRSAAELETKPDCTLL 77 (320)
T ss_dssp CEEEEESCCHHHHHHHHHHH-HTTCEEEEECSTTHHHHHHH--CE--EEEETTTCCEEECCSCEESCGGGCSSCCSEEEE
T ss_pred CEEEEECcCHHHHHHHHHHH-hCCCeEEEEeCChHHHHHhC--Cc--EEeecCCCcEEEeeeeeECCHHHcCCCCCEEEE
Confidence 58999999999999999985 56899999998753211110 00 0000 010000 01123566776668999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++|... +...+ ++.-..+++++++|.+.-| +-.++.|.+.+...++.
T Consensus 78 avK~~~-~~~~l-~~l~~~l~~~t~Iv~~~nG-i~~~~~l~~~~~~~~vl 124 (320)
T 3i83_A 78 CIKVVE-GADRV-GLLRDAVAPDTGIVLISNG-IDIEPEVAAAFPDNEVI 124 (320)
T ss_dssp CCCCCT-TCCHH-HHHTTSCCTTCEEEEECSS-SSCSHHHHHHSTTSCEE
T ss_pred ecCCCC-hHHHH-HHHHhhcCCCCEEEEeCCC-CChHHHHHHHCCCCcEE
Confidence 999643 33333 4445567888999988776 23346677777554443
No 170
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=97.59 E-value=0.00013 Score=58.20 Aligned_cols=94 Identities=18% Similarity=0.128 Sum_probs=58.6
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc--cccccCCHHHHhhhCCEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVI 240 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiV 240 (386)
.+++|+|+|.|.||+.+++.| ...| .+|++++++....... ...+.... ......++.++++.+|+|
T Consensus 4 ~~~~v~I~G~G~iG~~~~~~l-~~~g~~~v~~~~r~~~~~~~~---------~~~~~~~~~~d~~~~~~~~~~~~~~d~v 73 (118)
T 3ic5_A 4 MRWNICVVGAGKIGQMIAALL-KTSSNYSVTVADHDLAALAVL---------NRMGVATKQVDAKDEAGLAKALGGFDAV 73 (118)
T ss_dssp TCEEEEEECCSHHHHHHHHHH-HHCSSEEEEEEESCHHHHHHH---------HTTTCEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CcCeEEEECCCHHHHHHHHHH-HhCCCceEEEEeCCHHHHHHH---------HhCCCcEEEecCCCHHHHHHHHcCCCEE
Confidence 457899999999999999998 5678 8999999986542111 11111000 011113456778899999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~a 272 (386)
+.+.|... +..++ . ...+.|...++.+
T Consensus 74 i~~~~~~~-~~~~~-~---~~~~~g~~~~~~~ 100 (118)
T 3ic5_A 74 ISAAPFFL-TPIIA-K---AAKAAGAHYFDLT 100 (118)
T ss_dssp EECSCGGG-HHHHH-H---HHHHTTCEEECCC
T ss_pred EECCCchh-hHHHH-H---HHHHhCCCEEEec
Confidence 99998432 22221 1 1124577777765
No 171
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=97.58 E-value=0.00026 Score=69.90 Aligned_cols=96 Identities=16% Similarity=0.080 Sum_probs=62.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEc---CChhhHHHHHHhhhhhhhhhcC------CC-C--c----ccc-ccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD---LYQATRLEKFVTAYGQFLKANG------EQ-P--V----TWK-RAS 228 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d---~~~~~~~~~~~~~~~~~~~~~~------~~-~--~----~~~-~~~ 228 (386)
++|+|||.|.||..+|..|++.-|.+|.+|+ ++... .+.. .+..+ .. . . ... ...
T Consensus 3 mkI~ViGaG~~G~~~a~~La~~~G~~V~~~~~~~r~~~~-~~~~-------~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (404)
T 3c7a_A 3 VKVCVCGGGNGAHTLSGLAASRDGVEVRVLTLFADEAER-WTKA-------LGADELTVIVNEKDGTQTEVKSRPKVITK 74 (404)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSTTEEEEEECCSTTHHHH-HHHH-------HTTSCEEEEEECSSSCEEEEEECCSEEES
T ss_pred ceEEEECCCHHHHHHHHHHHhCCCCEEEEEeCCCCcHHH-HHHH-------HhhccceeeeecCCCccceeeccceEEeC
Confidence 4799999999999999998432489999999 54322 1110 11111 00 0 0 011 235
Q ss_pred CHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016620 229 SMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 229 ~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~ 271 (386)
++++.+..+|+|++++|... ...++ ++....+++++++++.
T Consensus 75 ~~~~a~~~aD~Vilav~~~~-~~~v~-~~l~~~l~~~~ivv~~ 115 (404)
T 3c7a_A 75 DPEIAISGADVVILTVPAFA-HEGYF-QAMAPYVQDSALIVGL 115 (404)
T ss_dssp CHHHHHTTCSEEEECSCGGG-HHHHH-HHHTTTCCTTCEEEET
T ss_pred CHHHHhCCCCEEEEeCchHH-HHHHH-HHHHhhCCCCcEEEEc
Confidence 78888999999999999543 34333 3444567889999884
No 172
>2a9f_A Putative malic enzyme ((S)-malate:NAD+ oxidoreductase (decarboxylating)); hypothetical protein, structural genomics, PSI; 2.50A {Streptococcus pyogenes}
Probab=97.56 E-value=0.00019 Score=70.65 Aligned_cols=266 Identities=14% Similarity=0.157 Sum_probs=149.3
Q ss_pred HHhCCCeEEEecCCCCCC---------------CHHHHHHHhcCCCcEEEecCCccccHHHHHHhhccCC--cEEEEccc
Q 016620 33 LIEQDCRVEICTQKKTIL---------------SVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGG--KAFSNMAV 95 (386)
Q Consensus 33 l~~~~~~~~~~~~~~~~~---------------~~~e~~~~~~~~ad~vi~~~~~~~~~~~l~~l~~l~~--k~i~~~~~ 95 (386)
+...+..+-++++....+ .+..+-..++ +.|++=+.....=..++++...++-. -.|++--.
T Consensus 61 ~t~~~~~V~VvTdG~~iLGLGD~G~~aG~pI~eGK~~Lf~~~a-gid~~pi~Ldv~~~dEfv~~v~~~~p~F~~I~lED~ 139 (398)
T 2a9f_A 61 LTTKKNTVAVISDGTAVLGLGDIGPEAAMPVMEGKAALFKAFA-GVDAIPIVLDTKDTEEIISIVKALAPTFGGINLEDI 139 (398)
T ss_dssp HSGGGTEEEEEECSSSCTTSCCCCHHHHHHHHHHHHHHHHHHS-SCEEEEEECCCCCHHHHHHHHHHHGGGCSEEEECSC
T ss_pred hcccCCEEEEEECCccccCCCCcccccCCcchhCHHHHHHhcc-CCceeeeEeCCCCHHHHHHHHHHcCCceeEeccccC
Confidence 444566776666554432 2234444444 46654333333224555455443210 23333322
Q ss_pred cccc-cC-hhHHhh-CCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEe
Q 016620 96 GYNN-VD-VNAANK-YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIG 172 (386)
Q Consensus 96 G~d~-id-~~~~~~-~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG 172 (386)
+..+ +. ++..++ ..|++.|. + -.-+|=-+++-+++..| ..|+.+...+|.|+|
T Consensus 140 ~~p~~f~il~~~r~~~~ipvf~D-D--iqGTa~V~lAall~al~---------------------l~g~~l~d~kVVi~G 195 (398)
T 2a9f_A 140 SAPRCFEIEQRLIKECHIPVFHD-D--QHGTAIVVLAAIFNSLK---------------------LLKKSLDEVSIVVNG 195 (398)
T ss_dssp CTTHHHHHHHHHHHHCSSCEEEH-H--HHHHHHHHHHHHHHHHH---------------------TTTCCTTSCEEEEEC
T ss_pred CChHHHHHHHHhhhcCCcceecc-h--hhhHHHHHHHHHHHHHH---------------------HhCCCCCccEEEEEC
Confidence 2111 11 123333 35888883 2 24455566777777666 123578999999999
Q ss_pred cChhHHHHHHHHHhcCCc-EEEEEcCCh-----h-hHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 173 AGRIGSAYARMMVEGFKM-NLIYYDLYQ-----A-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 173 ~G~IG~~iA~~L~~~fg~-~V~~~d~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
.|..|..+|+.+ .++|. +|+.+|++. + ..+..+-..|... ... .....+|+|+++.+|+++-+-
T Consensus 196 AGaAG~~iA~ll-~~~Ga~~I~v~D~~Gli~~~R~~~L~~~k~~fa~~---~~~----~~~~~~L~eav~~ADV~IG~S- 266 (398)
T 2a9f_A 196 GGSAGLSITRKL-LAAGATKVTVVDKFGIINEQEAAQLAPHHLDIAKV---TNR----EFKSGTLEDALEGADIFIGVS- 266 (398)
T ss_dssp CSHHHHHHHHHH-HHHTCCEEEEEETTEECCTTCCCSCCC---CHHHH---HSC----TTCCCSCSHHHHTTCSEEECC-
T ss_pred CCHHHHHHHHHH-HHcCCCeEEEEECCCcccCCccccchHHHHHHhhc---cCc----ccchhhHHHHhccCCEEEecC-
Confidence 999999999987 68899 999999873 1 1111111111110 000 011357999999999998773
Q ss_pred CChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCC-cceEEeeccCCCCCCCCCCCCCCCeEEcCCCCCC
Q 016620 246 LDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNP-MFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIASA 324 (386)
Q Consensus 246 lt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~-i~gaalDV~~~EP~~~~~L~~~~nvilTPHia~~ 324 (386)
+-+++.++.++.|+++++++.+|.... |-.=.++.+.|+ |.+-+ -...| =+..|+++-|-++-.
T Consensus 267 ----apgl~T~EmVk~Ma~~pIIfalsNPt~--E~~pe~a~~~g~~i~atG---rs~~p------~Q~NN~~~FPgi~~G 331 (398)
T 2a9f_A 267 ----APGVLKAEWISKMAARPVIFAMANPIP--EIYPDEALEAGAYIVGTG---RSDFP------NQINNVLAFPGIFRG 331 (398)
T ss_dssp ----STTCCCHHHHHTSCSSCEEEECCSSSC--SSCHHHHHTTTCSEEEES---CTTSS------SBCCGGGTHHHHHHH
T ss_pred ----CCCCCCHHHHHhhCCCCEEEECCCCCc--cCCHHHHHHhCCeEEEeC---CCCCC------CcCCceeEcchHHHH
Confidence 258999999999999999999999764 222223333354 22222 11111 356688888865432
Q ss_pred cHH-----HHHHHHHHHHHHHHHHHcCC
Q 016620 325 SKW-----TREGMATLAALNVLGKIKGY 347 (386)
Q Consensus 325 t~~-----~~~~~~~~~~~ni~~~~~g~ 347 (386)
... ..+.|...+++-|-.+..-+
T Consensus 332 al~~~a~~I~d~m~~aAa~alA~~~~~~ 359 (398)
T 2a9f_A 332 ALDARAKTITVEMQIAAAKGIASLVPDD 359 (398)
T ss_dssp HHHHTCSSCCHHHHHHHHHHHHHTCSSC
T ss_pred HHHcCCcCCCHHHHHHHHHHHHhcCCcc
Confidence 111 12455555666666655544
No 173
>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*
Probab=97.56 E-value=0.00036 Score=57.63 Aligned_cols=100 Identities=11% Similarity=0.180 Sum_probs=58.8
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHH---HH-hhhCC
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD---EV-LREAD 238 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---el-l~~aD 238 (386)
+.+++|+|+|+|.+|+.+++.| ...|.+|+++|++.... +. +...+.. .......+.+ ++ +.++|
T Consensus 4 ~~~~~v~I~G~G~iG~~~a~~l-~~~g~~v~~~d~~~~~~-~~--------~~~~~~~-~~~~d~~~~~~l~~~~~~~~d 72 (144)
T 2hmt_A 4 IKNKQFAVIGLGRFGGSIVKEL-HRMGHEVLAVDINEEKV-NA--------YASYATH-AVIANATEENELLSLGIRNFE 72 (144)
T ss_dssp --CCSEEEECCSHHHHHHHHHH-HHTTCCCEEEESCHHHH-HT--------TTTTCSE-EEECCTTCHHHHHTTTGGGCS
T ss_pred CcCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHH-HH--------HHHhCCE-EEEeCCCCHHHHHhcCCCCCC
Confidence 5678899999999999999998 57899999999876432 11 1111110 0001112322 22 57899
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+|+++++...++.. .-......+.+. .+|-.+.+.
T Consensus 73 ~vi~~~~~~~~~~~-~~~~~~~~~~~~-~ii~~~~~~ 107 (144)
T 2hmt_A 73 YVIVAIGANIQAST-LTTLLLKELDIP-NIWVKAQNY 107 (144)
T ss_dssp EEEECCCSCHHHHH-HHHHHHHHTTCS-EEEEECCSH
T ss_pred EEEECCCCchHHHH-HHHHHHHHcCCC-eEEEEeCCH
Confidence 99999986523221 223344556665 555544443
No 174
>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5
Probab=97.55 E-value=0.00038 Score=65.19 Aligned_cols=100 Identities=16% Similarity=0.125 Sum_probs=63.3
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh-hhCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiV 240 (386)
++.|+++.|+|.|.+|+++|+.| ...|.+|++++|+.... ++..+.+ ...+ . . ...+++++. .++|+|
T Consensus 116 ~l~~k~vlViGaGg~g~a~a~~L-~~~G~~V~v~~R~~~~~-~~la~~~----~~~~--~--~-~~~~~~~~~~~~~Div 184 (271)
T 1nyt_A 116 IRPGLRILLIGAGGASRGVLLPL-LSLDCAVTITNRTVSRA-EELAKLF----AHTG--S--I-QALSMDELEGHEFDLI 184 (271)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSSHHHH-HHHHHHT----GGGS--S--E-EECCSGGGTTCCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHcCCEEEEEECCHHHH-HHHHHHh----hccC--C--e-eEecHHHhccCCCCEE
Confidence 47889999999999999999998 47889999999986542 2211111 0000 0 0 112333333 589999
Q ss_pred EEccCCChhhh-hcccHHHHhcCCCCcEEEEcCCCc
Q 016620 241 SLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 241 vl~lPlt~~t~-~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+.++|...... .-+..+ .++++.+++|+....
T Consensus 185 Vn~t~~~~~~~~~~i~~~---~l~~~~~v~D~~y~p 217 (271)
T 1nyt_A 185 INATSSGISGDIPAIPSS---LIHPGIYCYDMFYQK 217 (271)
T ss_dssp EECCSCGGGTCCCCCCGG---GCCTTCEEEESCCCS
T ss_pred EECCCCCCCCCCCCCCHH---HcCCCCEEEEeccCC
Confidence 99999643210 012222 256788888887754
No 175
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=97.55 E-value=9.5e-05 Score=69.97 Aligned_cols=111 Identities=20% Similarity=0.209 Sum_probs=69.8
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
++.|+++.|+|.|.+|++++..| ...|+ +|++++|+.... ++..+.+ ...+ .. ...+++++..++|+|
T Consensus 123 ~l~~k~vlvlGaGg~g~aia~~L-~~~G~~~v~v~~R~~~~a-~~la~~~----~~~~--~~---~~~~~~~l~~~aDiI 191 (281)
T 3o8q_A 123 LLKGATILLIGAGGAARGVLKPL-LDQQPASITVTNRTFAKA-EQLAELV----AAYG--EV---KAQAFEQLKQSYDVI 191 (281)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HTTCCSEEEEEESSHHHH-HHHHHHH----GGGS--CE---EEEEGGGCCSCEEEE
T ss_pred CccCCEEEEECchHHHHHHHHHH-HhcCCCeEEEEECCHHHH-HHHHHHh----hccC--Ce---eEeeHHHhcCCCCEE
Confidence 58899999999999999999998 47896 999999987542 2211111 1111 01 122445555789999
Q ss_pred EEccCCChhhh-hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 241 SLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 241 vl~lPlt~~t~-~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
+.++|..-... ..+.. +.++++.+++|+.-.+ ..+. |++..++
T Consensus 192 InaTp~gm~~~~~~l~~---~~l~~~~~V~DlvY~P-~~T~-ll~~A~~ 235 (281)
T 3o8q_A 192 INSTSASLDGELPAIDP---VIFSSRSVCYDMMYGK-GYTV-FNQWARQ 235 (281)
T ss_dssp EECSCCCC----CSCCG---GGEEEEEEEEESCCCS-SCCH-HHHHHHH
T ss_pred EEcCcCCCCCCCCCCCH---HHhCcCCEEEEecCCC-ccCH-HHHHHHH
Confidence 99999753221 12332 3467788888887654 3444 4344443
No 176
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=97.54 E-value=0.00029 Score=66.33 Aligned_cols=99 Identities=12% Similarity=0.070 Sum_probs=62.0
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh-hhCC
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READ 238 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aD 238 (386)
.++.|+++.|+|.|.+|++++..| ...|+ +|++++|+.... ++..+.+ ....... .+++++- .++|
T Consensus 116 ~~l~~k~~lvlGaGg~~~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~-------~~~~~~~---~~~~~l~~~~~D 183 (272)
T 3pwz_A 116 EPLRNRRVLLLGAGGAVRGALLPF-LQAGPSELVIANRDMAKA-LALRNEL-------DHSRLRI---SRYEALEGQSFD 183 (272)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTCCSEEEEECSCHHHH-HHHHHHH-------CCTTEEE---ECSGGGTTCCCS
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHHHHHh-------ccCCeeE---eeHHHhcccCCC
Confidence 358999999999999999999998 46896 999999987542 2211111 1001111 2333332 6899
Q ss_pred EEEEccCCChhhh-hcccHHHHhcCCCCcEEEEcCCC
Q 016620 239 VISLHPVLDKTTY-HLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 239 iVvl~lPlt~~t~-~li~~~~~~~mk~gailIN~aRg 274 (386)
+|+.++|..-... ..+.. +.++++.+++|+.-.
T Consensus 184 ivInaTp~gm~~~~~~i~~---~~l~~~~~V~DlvY~ 217 (272)
T 3pwz_A 184 IVVNATSASLTADLPPLPA---DVLGEAALAYELAYG 217 (272)
T ss_dssp EEEECSSGGGGTCCCCCCG---GGGTTCSEEEESSCS
T ss_pred EEEECCCCCCCCCCCCCCH---HHhCcCCEEEEeecC
Confidence 9999999632211 12332 234667777777554
No 177
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=97.54 E-value=0.001 Score=62.90 Aligned_cols=106 Identities=19% Similarity=0.223 Sum_probs=66.3
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+.|+++.|+|.|.+|++++..| ...|+ +|++++|+.... ++..+.+.. .............++++.+.++|+|
T Consensus 124 ~l~~k~vlVlGaGG~g~aia~~L-~~~G~~~v~i~~R~~~~a-~~la~~~~~---~~~~~~i~~~~~~~l~~~l~~~DiV 198 (283)
T 3jyo_A 124 NAKLDSVVQVGAGGVGNAVAYAL-VTHGVQKLQVADLDTSRA-QALADVINN---AVGREAVVGVDARGIEDVIAAADGV 198 (283)
T ss_dssp TCCCSEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSSHHHH-HHHHHHHHH---HHTSCCEEEECSTTHHHHHHHSSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEECCHHHH-HHHHHHHHh---hcCCceEEEcCHHHHHHHHhcCCEE
Confidence 58899999999999999999998 47898 799999987542 111111110 0000111111234788889999999
Q ss_pred EEccCCChhhh--hcccHHHHhcCCCCcEEEEcCCCc
Q 016620 241 SLHPVLDKTTY--HLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 241 vl~lPlt~~t~--~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+.++|..-... ..+. .+.++++.+++|+.-.+
T Consensus 199 InaTp~Gm~~~~~~pi~---~~~l~~~~~v~DlvY~P 232 (283)
T 3jyo_A 199 VNATPMGMPAHPGTAFD---VSCLTKDHWVGDVVYMP 232 (283)
T ss_dssp EECSSTTSTTSCSCSSC---GGGCCTTCEEEECCCSS
T ss_pred EECCCCCCCCCCCCCCC---HHHhCCCCEEEEecCCC
Confidence 99999632111 1122 23356666667765543
No 178
>4b4u_A Bifunctional protein fold; oxidoreductase; HET: NAP; 1.45A {Acinetobacter baumannii atcc 19606} PDB: 4b4v_A* 4b4w_A*
Probab=97.52 E-value=0.00033 Score=66.47 Aligned_cols=77 Identities=21% Similarity=0.289 Sum_probs=63.6
Q ss_pred cccCCCeEEEEecCh-hHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 161 NLLKGQTVGVIGAGR-IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~-IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.+++||++.|||-+. +|+++|.+| ..-+++|..+..+ ..+|.+..++||+
T Consensus 175 i~l~Gk~vvViGRS~iVGkPla~LL-~~~~ATVTi~Hs~----------------------------T~dl~~~~~~ADI 225 (303)
T 4b4u_A 175 IEIAGKHAVVVGRSAILGKPMAMML-LQANATVTICHSR----------------------------TQNLPELVKQADI 225 (303)
T ss_dssp CCCTTCEEEEECCCTTTHHHHHHHH-HHTTCEEEEECTT----------------------------CSSHHHHHHTCSE
T ss_pred CCCCCCEEEEEeccccccchHHHHH-HhcCCEEEEecCC----------------------------CCCHHHHhhcCCe
Confidence 579999999999865 599999988 5789999887542 2478899999999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+.++.. .++|..+. .|+|+++||+|-
T Consensus 226 vV~A~G~----p~~i~~d~---vk~GavVIDVGi 252 (303)
T 4b4u_A 226 IVGAVGK----AELIQKDW---IKQGAVVVDAGF 252 (303)
T ss_dssp EEECSCS----TTCBCGGG---SCTTCEEEECCC
T ss_pred EEeccCC----CCcccccc---ccCCCEEEEece
Confidence 9999863 56777754 689999999985
No 179
>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*
Probab=97.51 E-value=0.00017 Score=67.71 Aligned_cols=105 Identities=15% Similarity=0.167 Sum_probs=61.4
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-hCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiV 240 (386)
.+.|++++|+|.|.+|++++..|+ ..|.+|++++|+.... ++..+.+ ...+ .. ...+++++.+ ++|+|
T Consensus 116 ~~~~~~vlvlGaGg~g~a~a~~L~-~~G~~v~v~~R~~~~a-~~l~~~~----~~~~--~~---~~~~~~~~~~~~~Div 184 (272)
T 1p77_A 116 LRPNQHVLILGAGGATKGVLLPLL-QAQQNIVLANRTFSKT-KELAERF----QPYG--NI---QAVSMDSIPLQTYDLV 184 (272)
T ss_dssp CCTTCEEEEECCSHHHHTTHHHHH-HTTCEEEEEESSHHHH-HHHHHHH----GGGS--CE---EEEEGGGCCCSCCSEE
T ss_pred CcCCCEEEEECCcHHHHHHHHHHH-HCCCEEEEEECCHHHH-HHHHHHc----cccC--Ce---EEeeHHHhccCCCCEE
Confidence 478899999999999999999984 6789999999986532 2221111 1000 00 0123333333 89999
Q ss_pred EEccCCChhhh-hcccHHHHhcCCCCcEEEEcCCCcccCHH
Q 016620 241 SLHPVLDKTTY-HLINKERLATMKKEAILVNCSRGPVIDEV 280 (386)
Q Consensus 241 vl~lPlt~~t~-~li~~~~~~~mk~gailIN~aRg~~vde~ 280 (386)
+.++|...... .-+..+. ++++.+++|+...+..+.+
T Consensus 185 In~t~~~~~~~~~~i~~~~---l~~~~~v~D~~y~p~~~t~ 222 (272)
T 1p77_A 185 INATSAGLSGGTASVDAEI---LKLGSAFYDMQYAKGTDTP 222 (272)
T ss_dssp EECCCC-------CCCHHH---HHHCSCEEESCCCTTSCCH
T ss_pred EECCCCCCCCCCCCCCHHH---cCCCCEEEEeeCCCCcCCH
Confidence 99999643210 0123232 2456666666664433344
No 180
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=97.50 E-value=0.00031 Score=58.57 Aligned_cols=95 Identities=14% Similarity=0.102 Sum_probs=56.4
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHH----hhhCCE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEV----LREADV 239 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~el----l~~aDi 239 (386)
.++++.|+|+|.+|+.+|+.| ...|.+|+++|+++..... +...+.. .......+.+.+ +.++|+
T Consensus 5 ~~~~v~I~G~G~iG~~la~~L-~~~g~~V~~id~~~~~~~~---------~~~~~~~-~~~gd~~~~~~l~~~~~~~~d~ 73 (141)
T 3llv_A 5 GRYEYIVIGSEAAGVGLVREL-TAAGKKVLAVDKSKEKIEL---------LEDEGFD-AVIADPTDESFYRSLDLEGVSA 73 (141)
T ss_dssp -CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEESCHHHHHH---------HHHTTCE-EEECCTTCHHHHHHSCCTTCSE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEECCHHHHHH---------HHHCCCc-EEECCCCCHHHHHhCCcccCCE
Confidence 457899999999999999998 5789999999997654211 1111111 001112232222 468999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~ 271 (386)
|++++|.. + .++.-....+.+....+++-+
T Consensus 74 vi~~~~~~-~-~n~~~~~~a~~~~~~~iia~~ 103 (141)
T 3llv_A 74 VLITGSDD-E-FNLKILKALRSVSDVYAIVRV 103 (141)
T ss_dssp EEECCSCH-H-HHHHHHHHHHHHCCCCEEEEE
T ss_pred EEEecCCH-H-HHHHHHHHHHHhCCceEEEEE
Confidence 99999943 2 333334444445534444433
No 181
>3zwc_A Peroxisomal bifunctional enzyme; beta oxidation pathway, oxidoreductase, lipid metabolism, LY isomerase, peroxisome, fatty acid metabolism; HET: NAD HSC; 2.30A {Rattus norvegicus} PDB: 3zw9_A* 3zw8_A* 3zwa_A* 3zwb_A* 2x58_A*
Probab=97.50 E-value=0.0006 Score=72.75 Aligned_cols=147 Identities=17% Similarity=0.174 Sum_probs=91.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHH--HHh-hhh---hhhhhcC--CCCccccccCCHHHHhhhC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK--FVT-AYG---QFLKANG--EQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~--~~~-~~~---~~~~~~~--~~~~~~~~~~~l~ell~~a 237 (386)
++|||||.|.||..||..++ ..|.+|+.+|++....... ... .+. ....... ..........+++ .+++|
T Consensus 317 ~~v~ViGaG~MG~gIA~~~a-~aG~~V~l~D~~~~~l~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~a 394 (742)
T 3zwc_A 317 SSVGVLGLGTMGRGIAISFA-RVGISVVAVESDPKQLDAAKKIITFTLEKEASRAHQNGQASAKPKLRFSSSTK-ELSTV 394 (742)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHHHTTTCCCCCCCEEEESCGG-GGGSC
T ss_pred cEEEEEcccHHHHHHHHHHH-hCCCchhcccchHhhhhhHHHHHHHHHHHHHHhccccchhhhhhhhcccCcHH-HHhhC
Confidence 68999999999999999875 6899999999987542211 111 000 0011111 1111122234444 47899
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEE
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIV 317 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvil 317 (386)
|+|+=++|-+-+.+.-+-++.-+.++++++|-.-+++ +....|.++++ ..-..+++..|.+-| .-||. -|+-
T Consensus 395 DlVIEAV~E~l~iK~~vf~~le~~~~~~aIlASNTSs--l~i~~ia~~~~-~p~r~ig~HFfnP~~--~m~LV---Evi~ 466 (742)
T 3zwc_A 395 DLVVEAVFEDMNLKKKVFAELSALCKPGAFLCTNTSA--LNVDDIASSTD-RPQLVIGTHFFSPAH--VMRLL---EVIP 466 (742)
T ss_dssp SEEEECCCSCHHHHHHHHHHHHHHSCTTCEEEECCSS--SCHHHHHTTSS-CGGGEEEEECCSSTT--TCCEE---EEEE
T ss_pred CEEEEeccccHHHHHHHHHHHhhcCCCCceEEecCCc--CChHHHHhhcC-CccccccccccCCCC--CCceE---EEec
Confidence 9999999988887776667777789999988543332 34456666654 345677777775322 12333 3676
Q ss_pred cCCCC
Q 016620 318 VPHIA 322 (386)
Q Consensus 318 TPHia 322 (386)
+|+++
T Consensus 467 g~~Ts 471 (742)
T 3zwc_A 467 SRYSS 471 (742)
T ss_dssp CSSCC
T ss_pred CCCCC
Confidence 77654
No 182
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=97.49 E-value=0.00065 Score=65.27 Aligned_cols=107 Identities=13% Similarity=0.137 Sum_probs=65.4
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCC---hhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHH
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY---QATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV 233 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el 233 (386)
.++.|+++.|+|.|.+|++++..| ...|+ +|++++|+ ... .++..+.+ ..............+ +.+.
T Consensus 150 ~~l~gk~~lVlGaGG~g~aia~~L-~~~Ga~~V~i~nR~~~~~~~-a~~la~~~----~~~~~~~~~~~~~~~~~~l~~~ 223 (315)
T 3tnl_A 150 HDIIGKKMTICGAGGAATAICIQA-ALDGVKEISIFNRKDDFYAN-AEKTVEKI----NSKTDCKAQLFDIEDHEQLRKE 223 (315)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTTHHH-HHHHHHHH----HHHSSCEEEEEETTCHHHHHHH
T ss_pred CCccCCEEEEECCChHHHHHHHHH-HHCCCCEEEEEECCCchHHH-HHHHHHHh----hhhcCCceEEeccchHHHHHhh
Confidence 358999999999999999999998 47898 89999998 432 22211111 111100111112223 5567
Q ss_pred hhhCCEEEEccCCCh--hh-hhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 234 LREADVISLHPVLDK--TT-YHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 234 l~~aDiVvl~lPlt~--~t-~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+.++|+|+.++|..= .. ...+. ....++++.+++|+.-.+
T Consensus 224 l~~aDiIINaTp~Gm~~~~~~~p~~--~~~~l~~~~~V~DlvY~P 266 (315)
T 3tnl_A 224 IAESVIFTNATGVGMKPFEGETLLP--SADMLRPELIVSDVVYKP 266 (315)
T ss_dssp HHTCSEEEECSSTTSTTSTTCCSCC--CGGGCCTTCEEEESCCSS
T ss_pred hcCCCEEEECccCCCCCCCCCCCCC--cHHHcCCCCEEEEeccCC
Confidence 889999999999631 11 11120 123456777777776544
No 183
>2ewd_A Lactate dehydrogenase,; protein-substrate_cofactor analog complex, oxidoreductase; HET: A3D; 2.00A {Cryptosporidium parvum} PDB: 2frm_A 2fn7_A* 2fnz_A* 2fm3_A
Probab=97.42 E-value=0.00027 Score=67.71 Aligned_cols=117 Identities=11% Similarity=0.160 Sum_probs=66.8
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.++|+|||.|.||..+|..|+ ..|. +|..||++.........+.... ..... .........++ +.++.||+|+++
T Consensus 4 ~~kI~VIGaG~~G~~ia~~la-~~g~~~V~l~D~~~~~~~~~~~~l~~~-~~~~~-~~~~i~~t~d~-~a~~~aDiVi~a 79 (317)
T 2ewd_A 4 RRKIAVIGSGQIGGNIAYIVG-KDNLADVVLFDIAEGIPQGKALDITHS-MVMFG-STSKVIGTDDY-ADISGSDVVIIT 79 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHHHHHHHHHHHH-HHHHT-CCCCEEEESCG-GGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCCchHHHHHHHHHHhh-hhhcC-CCcEEEECCCH-HHhCCCCEEEEe
Confidence 468999999999999999885 4466 8999998764322111110000 00000 11122223566 678999999999
Q ss_pred cCCCh-----------hhhhcc---cHHHHhcCCCCcEEEEcCCCcccCHHHHHHHH
Q 016620 244 PVLDK-----------TTYHLI---NKERLATMKKEAILVNCSRGPVIDEVALVEHL 286 (386)
Q Consensus 244 lPlt~-----------~t~~li---~~~~~~~mk~gailIN~aRg~~vde~aL~~aL 286 (386)
++... ++..++ -++. ....+++++++++-..-+....+.+..
T Consensus 80 vg~p~~~g~~r~d~~~~~~~i~~~i~~~i-~~~~~~~iii~~sNp~~~~~~~~~~~~ 135 (317)
T 2ewd_A 80 ASIPGRPKDDRSELLFGNARILDSVAEGV-KKYCPNAFVICITNPLDVMVSHFQKVS 135 (317)
T ss_dssp CCCSSCCSSCGGGGHHHHHHHHHHHHHHH-HHHCTTSEEEECCSSHHHHHHHHHHHH
T ss_pred CCCCCCCCCcHHHHHHhhHHHHHHHHHHH-HHHCCCcEEEEeCChHHHHHHHHHHhh
Confidence 84211 111111 1222 223468999999875544445555544
No 184
>2ho3_A Oxidoreductase, GFO/IDH/MOCA family; streptococcus pneumonia reductive methylation, structural genomics, PSI-2, protein initiative; HET: MLY; 2.00A {Streptococcus pneumoniae} PDB: 2ho5_A
Probab=97.41 E-value=0.00055 Score=65.47 Aligned_cols=68 Identities=16% Similarity=0.259 Sum_probs=47.7
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh-hhCCEEEEcc
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiVvl~l 244 (386)
+|||||+|.||+.+++.+++.-++++. ++|++.... ..+.+ ..+. ...+.++++++ .++|+|++++
T Consensus 3 ~vgiiG~G~~g~~~~~~l~~~~~~~~~~v~d~~~~~~-~~~~~-------~~~~----~~~~~~~~~~l~~~~D~V~i~t 70 (325)
T 2ho3_A 3 KLGVIGTGAISHHFIEAAHTSGEYQLVAIYSRKLETA-ATFAS-------RYQN----IQLFDQLEVFFKSSFDLVYIAS 70 (325)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTSEEEEEEECSSHHHH-HHHGG-------GSSS----CEEESCHHHHHTSSCSEEEECS
T ss_pred EEEEEeCCHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHH-------HcCC----CeEeCCHHHHhCCCCCEEEEeC
Confidence 799999999999999987433367764 788876542 22111 1111 12357899999 7899999999
Q ss_pred CC
Q 016620 245 VL 246 (386)
Q Consensus 245 Pl 246 (386)
|.
T Consensus 71 p~ 72 (325)
T 2ho3_A 71 PN 72 (325)
T ss_dssp CG
T ss_pred Ch
Confidence 94
No 185
>3c1a_A Putative oxidoreductase; ZP_00056571.1, oxidoreductase FAM binding rossmann fold, structural genomics; HET: MSE PG4 PGE; 1.85A {Magnetospirillum magnetotacticum}
Probab=97.41 E-value=0.00039 Score=66.26 Aligned_cols=107 Identities=17% Similarity=0.131 Sum_probs=65.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+.+++.+++.-+.++ .++|++.... +. .... ...+.+++++++ ++|+|++
T Consensus 11 ~~igiIG~G~~g~~~~~~l~~~~~~~~v~v~d~~~~~~-~~-----------~~~~---~~~~~~~~~~l~~~~~D~V~i 75 (315)
T 3c1a_A 11 VRLALIGAGRWGKNYIRTIAGLPGAALVRLASSNPDNL-AL-----------VPPG---CVIESDWRSVVSAPEVEAVII 75 (315)
T ss_dssp EEEEEEECTTTTTTHHHHHHHCTTEEEEEEEESCHHHH-TT-----------CCTT---CEEESSTHHHHTCTTCCEEEE
T ss_pred ceEEEECCcHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HH-----------HHhh---CcccCCHHHHhhCCCCCEEEE
Confidence 479999999999999998753336775 4888876532 10 0111 123568899986 7999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~i~ 292 (386)
++|... .. +-....++.|. +++.- .--.+-+.+.|.++.++..+.
T Consensus 76 ~tp~~~--h~---~~~~~al~~Gk~v~~eKP~~~~~~~~~~l~~~a~~~g~~ 122 (315)
T 3c1a_A 76 ATPPAT--HA---EITLAAIASGKAVLVEKPLTLDLAEAEAVAAAAKATGVM 122 (315)
T ss_dssp ESCGGG--HH---HHHHHHHHTTCEEEEESSSCSCHHHHHHHHHHHHHHCCC
T ss_pred eCChHH--HH---HHHHHHHHCCCcEEEcCCCcCCHHHHHHHHHHHHHcCCE
Confidence 999422 21 11223345564 55552 222344556777777665443
No 186
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=97.41 E-value=0.00061 Score=64.95 Aligned_cols=120 Identities=13% Similarity=0.148 Sum_probs=72.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh-cCCCCc-cccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPV-TWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~~~~l~ell~~aDiVvl~ 243 (386)
++|+|||.|.||..+|..|+ ..|.+|.+|+|+......+ .+-.... .+.... ......+.++ +..+|+|+++
T Consensus 3 mkI~IiGaGaiG~~~a~~L~-~~g~~V~~~~r~~~~~i~~----~g~~~~~~~g~~~~~~~~~~~~~~~-~~~~D~vila 76 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQ-RSGEDVHFLLRRDYEAIAG----NGLKVFSINGDFTLPHVKGYRAPEE-IGPMDLVLVG 76 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHH-HTSCCEEEECSTTHHHHHH----TCEEEEETTCCEEESCCCEESCHHH-HCCCSEEEEC
T ss_pred CEEEEECcCHHHHHHHHHHH-HCCCeEEEEEcCcHHHHHh----CCCEEEcCCCeEEEeeceeecCHHH-cCCCCEEEEe
Confidence 57999999999999999985 5688999999875221111 0000000 000000 0111245555 6789999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga 294 (386)
+|.. ++...+ ++.-..+++++++|.+.-| +-.++.|.+.+...++.++
T Consensus 77 vk~~-~~~~~l-~~l~~~l~~~~~iv~l~nG-i~~~~~l~~~~~~~~v~~~ 124 (312)
T 3hn2_A 77 LKTF-ANSRYE-ELIRPLVEEGTQILTLQNG-LGNEEALATLFGAERIIGG 124 (312)
T ss_dssp CCGG-GGGGHH-HHHGGGCCTTCEEEECCSS-SSHHHHHHHHTCGGGEEEE
T ss_pred cCCC-CcHHHH-HHHHhhcCCCCEEEEecCC-CCcHHHHHHHCCCCcEEEE
Confidence 9953 333332 3444567889999998776 2235667776654444443
No 187
>3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum}
Probab=97.41 E-value=0.00047 Score=66.49 Aligned_cols=69 Identities=26% Similarity=0.388 Sum_probs=50.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+..++.|++.-++++. ++|++.... +.+.+. .+ ...+.+++++++ ++|+|++
T Consensus 5 ~rvgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~-------~g-----~~~~~~~~~~l~~~~~D~V~i 71 (344)
T 3euw_A 5 LRIALFGAGRIGHVHAANIAANPDLELVVIADPFIEGA-QRLAEA-------NG-----AEAVASPDEVFARDDIDGIVI 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHT-------TT-----CEEESSHHHHTTCSCCCEEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHH-------cC-----CceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987543478876 688876542 221111 11 224579999998 8999999
Q ss_pred ccCCC
Q 016620 243 HPVLD 247 (386)
Q Consensus 243 ~lPlt 247 (386)
|+|..
T Consensus 72 ~tp~~ 76 (344)
T 3euw_A 72 GSPTS 76 (344)
T ss_dssp CSCGG
T ss_pred eCCch
Confidence 99953
No 188
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=97.39 E-value=0.001 Score=66.78 Aligned_cols=148 Identities=14% Similarity=0.069 Sum_probs=82.0
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhh--------hhhhhhhcCCCCccccccCCHHHHhh
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTA--------YGQFLKANGEQPVTWKRASSMDEVLR 235 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (386)
+-.+|+|||+|-+|..+|..|+ ..|.+|+++|.+.... +..... ..+.+++.... -+....++.++.++
T Consensus 20 ~m~~IaViGlGYVGLp~A~~~A-~~G~~V~g~Did~~kV-~~ln~G~~pi~Epgl~ell~~~~~~-g~l~~tt~~~~ai~ 96 (444)
T 3vtf_A 20 HMASLSVLGLGYVGVVHAVGFA-LLGHRVVGYDVNPSIV-ERLRAGRPHIYEPGLEEALGRALSS-GRLSFAESAEEAVA 96 (444)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HHTCEEEEECSCHHHH-HHHHTTCCSSCCTTHHHHHHHHHHT-TCEEECSSHHHHHH
T ss_pred CCCEEEEEccCHHHHHHHHHHH-hCCCcEEEEECCHHHH-HHHHCCCCCCCCCCHHHHHHHHHHc-CCeeEEcCHHHHHh
Confidence 3458999999999999999985 5789999999886542 111000 00001000000 01123467889999
Q ss_pred hCCEEEEccCCChhhh-------hccc--HHHHhcC---CCCcEEEEcCCCcccCHHHHH-HHHHcCCcceEEee-ccCC
Q 016620 236 EADVISLHPVLDKTTY-------HLIN--KERLATM---KKEAILVNCSRGPVIDEVALV-EHLKQNPMFRVGLD-VFED 301 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~-------~li~--~~~~~~m---k~gailIN~aRg~~vde~aL~-~aL~~g~i~gaalD-V~~~ 301 (386)
.||++++|+|. |... .+.. +..-+.+ .+|.++|.-|.-.+=-.+.+. ..+++. -.+.-++ ++.+
T Consensus 97 ~ad~~~I~VpT-P~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGtte~~~~~~l~~~-~~~~~f~v~~~P 174 (444)
T 3vtf_A 97 ATDATFIAVGT-PPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGTTEGLVARAVAEE-AGGVKFSVASNP 174 (444)
T ss_dssp TSSEEEECCCC-CBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTTTTTHHHHHHHTT-TTTCCCEEEECC
T ss_pred cCCceEEEecC-CCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCchHHHHHHHHHHHh-CCCCCceeecCc
Confidence 99999999883 3211 1111 2222334 368899998886664444443 334432 2233333 2456
Q ss_pred CCCCCC----CCCCCCCeE
Q 016620 302 EPYMKP----GLSEMKNAI 316 (386)
Q Consensus 302 EP~~~~----~L~~~~nvi 316 (386)
|-+... .+...++|+
T Consensus 175 Erl~eG~a~~d~~~~~riV 193 (444)
T 3vtf_A 175 EFLREGSALEDFFKPDRIV 193 (444)
T ss_dssp CCCCTTSHHHHHHSCSCEE
T ss_pred ccccCCccccccccCCcEE
Confidence 654221 244455554
No 189
>1pzg_A LDH, lactate dehydrogenase; apicomplexa, APAD, tetramer, rossmann fold, oxidoreductase; HET: CME A3D; 1.60A {Toxoplasma gondii} SCOP: c.2.1.5 d.162.1.1 PDB: 1pzf_A* 1pze_A* 1pzh_A* 3om9_A* 1sov_A 1sow_A* 3czm_A*
Probab=97.37 E-value=0.00076 Score=65.15 Aligned_cols=81 Identities=17% Similarity=0.249 Sum_probs=51.7
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.++|+|||.|.+|..+|..|+ .-|. +|..||++.........+.. ....... .+.......++++.+++||+|+++
T Consensus 9 ~~kI~VIGaG~vG~~lA~~la-~~g~~~V~L~D~~~~~~~~~~~~l~-~~~~~~~-~~~~i~~t~d~~ea~~~aDiVi~a 85 (331)
T 1pzg_A 9 RKKVAMIGSGMIGGTMGYLCA-LRELADVVLYDVVKGMPEGKALDLS-HVTSVVD-TNVSVRAEYSYEAALTGADCVIVT 85 (331)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCEEEEECSSSSHHHHHHHHHH-HHHHHTT-CCCCEEEECSHHHHHTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECChhHHHHHHHHHH-hhhhccC-CCCEEEEeCCHHHHhCCCCEEEEc
Confidence 368999999999999999885 3455 89999987643221111110 0011111 122233346888889999999999
Q ss_pred c--CCCh
Q 016620 244 P--VLDK 248 (386)
Q Consensus 244 l--Plt~ 248 (386)
. |..+
T Consensus 86 ~g~p~~~ 92 (331)
T 1pzg_A 86 AGLTKVP 92 (331)
T ss_dssp CSCSSCT
T ss_pred cCCCCCC
Confidence 8 6543
No 190
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=97.34 E-value=0.00089 Score=63.30 Aligned_cols=108 Identities=15% Similarity=0.114 Sum_probs=68.4
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
++.|+++.|+|.|.+|++++..| ...|+ +|++++|+.... ++. .. ........++++ + ++|+|
T Consensus 119 ~~~~k~vlvlGaGGaaraia~~L-~~~G~~~v~v~nRt~~ka-~~L--------a~----~~~~~~~~~l~~-l-~~Div 182 (282)
T 3fbt_A 119 EIKNNICVVLGSGGAARAVLQYL-KDNFAKDIYVVTRNPEKT-SEI--------YG----EFKVISYDELSN-L-KGDVI 182 (282)
T ss_dssp CCTTSEEEEECSSTTHHHHHHHH-HHTTCSEEEEEESCHHHH-HHH--------CT----TSEEEEHHHHTT-C-CCSEE
T ss_pred CccCCEEEEECCcHHHHHHHHHH-HHcCCCEEEEEeCCHHHH-HHH--------HH----hcCcccHHHHHh-c-cCCEE
Confidence 57899999999999999999998 57898 899999987542 111 00 011111223444 4 89999
Q ss_pred EEccCCC--hhhh-hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 241 SLHPVLD--KTTY-HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 241 vl~lPlt--~~t~-~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
+.++|.. +... ..+..+. ++++.+++|+.-.+. .+.=|..|-+.|
T Consensus 183 InaTp~Gm~~~~~~~pi~~~~---l~~~~~v~DlvY~P~-~T~ll~~A~~~G 230 (282)
T 3fbt_A 183 INCTPKGMYPKEGESPVDKEV---VAKFSSAVDLIYNPV-ETLFLKYARESG 230 (282)
T ss_dssp EECSSTTSTTSTTCCSSCHHH---HTTCSEEEESCCSSS-SCHHHHHHHHTT
T ss_pred EECCccCccCCCccCCCCHHH---cCCCCEEEEEeeCCC-CCHHHHHHHHCc
Confidence 9999963 2111 1245444 357888888865442 334333444444
No 191
>2dvm_A Malic enzyme, 439AA long hypothetical malate oxidoreductase; NAD, structural genomics, NPPSFA; HET: NAD MES; 1.60A {Pyrococcus horikoshii} PDB: 1ww8_A*
Probab=97.34 E-value=0.00031 Score=70.38 Aligned_cols=162 Identities=18% Similarity=0.147 Sum_probs=98.7
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc---EEEEEc----CC----hhhH---HHHHHhhhhhhhhhcCCCCccccc
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM---NLIYYD----LY----QATR---LEKFVTAYGQFLKANGEQPVTWKR 226 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~---~V~~~d----~~----~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 226 (386)
..+.++++.|+|.|..|+.+++.| ...|+ +|+++| |+ .... +..+...+ ... ... ...
T Consensus 182 ~~l~~~rvlvlGAGgAg~aia~~L-~~~G~~~~~I~vvd~~~~R~G~~~~a~~~~~L~~~~~~~----a~~--~~~-~~~ 253 (439)
T 2dvm_A 182 KKISEITLALFGAGAAGFATLRIL-TEAGVKPENVRVVELVNGKPRILTSDLDLEKLFPYRGWL----LKK--TNG-ENI 253 (439)
T ss_dssp CCTTTCCEEEECCSHHHHHHHHHH-HHTTCCGGGEEEEEEETTEEEECCTTSCHHHHSTTCHHH----HTT--SCT-TCC
T ss_pred CCccCCEEEEECccHHHHHHHHHH-HHcCCCcCeEEEEEccCCCcCccccccchhHHHHHHHHH----hhc--ccc-ccc
Confidence 568899999999999999999998 57897 799999 76 2211 11100000 000 000 001
Q ss_pred cCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEe-eccCCCCCC
Q 016620 227 ASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGL-DVFEDEPYM 305 (386)
Q Consensus 227 ~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaal-DV~~~EP~~ 305 (386)
..++.+.+.++|+|+.+.|..+ +++.++.++.|+++.++++++... .|.-+.+|.+.|. +.+ +-..--
T Consensus 254 ~~~L~e~l~~aDVlInaT~~~~---G~~~~e~v~~m~~~~iVfDLynP~--~t~~~~~A~~~G~---~ivatG~~ml--- 322 (439)
T 2dvm_A 254 EGGPQEALKDADVLISFTRPGP---GVIKPQWIEKMNEDAIVFPLANPV--PEILPEEAKKAGA---RIVATGRSDY--- 322 (439)
T ss_dssp CSSHHHHHTTCSEEEECSCCCS---SSSCHHHHTTSCTTCEEEECCSSS--CSSCHHHHHHHTC---SEECBSCSSS---
T ss_pred cccHHHHhccCCEEEEcCCCcc---CCCChHHHHhcCCCCEEEECCCCC--CcchHHHHHHcCC---eEEcCCCchh---
Confidence 3578999999999999998522 456667788899999999995433 4555566666553 222 332211
Q ss_pred CCCCCCCCCeEEcCCCCC------CcHHHHHHHHHHHHHHHHHHHc
Q 016620 306 KPGLSEMKNAIVVPHIAS------ASKWTREGMATLAALNVLGKIK 345 (386)
Q Consensus 306 ~~~L~~~~nvilTPHia~------~t~~~~~~~~~~~~~ni~~~~~ 345 (386)
..+..|+++-|-++- .+ ...+.|...+++-|..+..
T Consensus 323 ---~~Q~nn~~~FPGi~~g~l~~~a~-~i~~~m~~aaa~ala~~~~ 364 (439)
T 2dvm_A 323 ---PNQINNLLGFPGIFRGALDVRAR-TITDSMIIAAAKAIASIVE 364 (439)
T ss_dssp ---SSBCCGGGTHHHHHHHHHHTTCS-CCCHHHHHHHHHHHHHTSS
T ss_pred ---HHHHHHHhcccCchHHHHhcCCC-CCCHHHHHHHHHHHHhhCc
Confidence 245567777775411 11 0124455555555655553
No 192
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=97.33 E-value=0.0011 Score=63.43 Aligned_cols=81 Identities=17% Similarity=0.195 Sum_probs=53.7
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCC---hhhHHHHHHhhhhhhhhhcCCCCccccccCCH---HHH
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY---QATRLEKFVTAYGQFLKANGEQPVTWKRASSM---DEV 233 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l---~el 233 (386)
.++.|+++.|+|.|.+|++++..| ...|+ +|++++|+ ... .++..+.+ ..............++ .+.
T Consensus 144 ~~l~gk~~lVlGAGGaaraia~~L-~~~G~~~v~v~nRt~~~~~~-a~~la~~~----~~~~~~~v~~~~~~~l~~~~~~ 217 (312)
T 3t4e_A 144 FDMRGKTMVLLGAGGAATAIGAQA-AIEGIKEIKLFNRKDDFFEK-AVAFAKRV----NENTDCVVTVTDLADQHAFTEA 217 (312)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEECSSTHHHH-HHHHHHHH----HHHSSCEEEEEETTCHHHHHHH
T ss_pred CCcCCCEEEEECcCHHHHHHHHHH-HHcCCCEEEEEECCCchHHH-HHHHHHHh----hhccCcceEEechHhhhhhHhh
Confidence 358899999999999999999998 57898 89999998 432 12111111 1110001111223454 567
Q ss_pred hhhCCEEEEccCCC
Q 016620 234 LREADVISLHPVLD 247 (386)
Q Consensus 234 l~~aDiVvl~lPlt 247 (386)
+.++|+|+.++|..
T Consensus 218 l~~~DiIINaTp~G 231 (312)
T 3t4e_A 218 LASADILTNGTKVG 231 (312)
T ss_dssp HHHCSEEEECSSTT
T ss_pred ccCceEEEECCcCC
Confidence 88999999999963
No 193
>3uuw_A Putative oxidoreductase with NAD(P)-binding rossm domain; structural genomics, center for structural genomics of infec diseases, csgid; HET: 1PE PGE; 1.63A {Clostridium difficile}
Probab=97.32 E-value=0.0012 Score=62.62 Aligned_cols=108 Identities=19% Similarity=0.311 Sum_probs=67.9
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.+|||||+|.||+. .++.+++.-++++. ++|++.... +.+.+.| +. ..+.++++++++.|+|++|
T Consensus 7 ~~igiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------~~-----~~~~~~~~ll~~~D~V~i~ 73 (308)
T 3uuw_A 7 IKMGMIGLGSIAQKAYLPILTKSERFEFVGAFTPNKVKR-EKICSDY-------RI-----MPFDSIESLAKKCDCIFLH 73 (308)
T ss_dssp CEEEEECCSHHHHHHTHHHHTSCSSSEEEEEECSCHHHH-HHHHHHH-------TC-----CBCSCHHHHHTTCSEEEEC
T ss_pred CcEEEEecCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHc-------CC-----CCcCCHHHHHhcCCEEEEe
Confidence 58999999999996 88877433577877 789876542 2222211 21 1257899999999999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCc-EEEE-cCCCcccCHHHHHHHHHcCCc
Q 016620 244 PVLDKTTYHLINKERLATMKKEA-ILVN-CSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~ga-ilIN-~aRg~~vde~aL~~aL~~g~i 291 (386)
+|.... .-+-... ++.|. +++. -.--.+-+.+.|.++.++..+
T Consensus 74 tp~~~h--~~~~~~a---l~~gk~vl~EKP~~~~~~~~~~l~~~a~~~g~ 118 (308)
T 3uuw_A 74 SSTETH--YEIIKIL---LNLGVHVYVDKPLASTVSQGEELIELSTKKNL 118 (308)
T ss_dssp CCGGGH--HHHHHHH---HHTTCEEEECSSSSSSHHHHHHHHHHHHHHTC
T ss_pred CCcHhH--HHHHHHH---HHCCCcEEEcCCCCCCHHHHHHHHHHHHHcCC
Confidence 995322 1111223 33443 5554 233345566778887776543
No 194
>4fgw_A Glycerol-3-phosphate dehydrogenase [NAD(+)] 1; oxidoreductase; 2.45A {Saccharomyces cerevisiae}
Probab=97.28 E-value=0.00053 Score=67.77 Aligned_cols=107 Identities=15% Similarity=0.237 Sum_probs=67.0
Q ss_pred eEEEEecChhHHHHHHHHHhc-------CCcEEEEEcCChhhH---HHHHHhhhhh--hhhhcCCCCccccccCCHHHHh
Q 016620 167 TVGVIGAGRIGSAYARMMVEG-------FKMNLIYYDLYQATR---LEKFVTAYGQ--FLKANGEQPVTWKRASSMDEVL 234 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~-------fg~~V~~~d~~~~~~---~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~ell 234 (386)
+|+|||.|.-|.++|..|++. |+.+|..|.|+.... ..+......+ ..-..-..+.......++++.+
T Consensus 36 KI~ViGaGsWGTALA~~la~ng~~~~~~~~~~V~lw~r~~e~~~~~~~e~in~~~~N~~YLpgv~Lp~~i~~t~dl~~al 115 (391)
T 4fgw_A 36 KVTVIGSGNWGTTIAKVVAENCKGYPEVFAPIVQMWVFEEEINGEKLTEIINTRHQNVKYLPGITLPDNLVANPDLIDSV 115 (391)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHHHCTTTEEEEEEEECCCCBSSSCBHHHHHTTTCCBTTTBTTCCCCSSEEEESCHHHHH
T ss_pred eEEEECcCHHHHHHHHHHHHcCCCccccCCceEEEEEcchHhhhHHHHHHHHhcCcCcccCCCCcCCCCcEEeCCHHHHH
Confidence 799999999999999988642 334688887654311 1111100000 0000112223334457899999
Q ss_pred hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 235 ~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+.||+|++++|. ...+.+ -++.-..++++..+|+++-|=
T Consensus 116 ~~ad~ii~avPs-~~~r~~-l~~l~~~~~~~~~iv~~~KGi 154 (391)
T 4fgw_A 116 KDVDIIVFNIPH-QFLPRI-CSQLKGHVDSHVRAISCLKGF 154 (391)
T ss_dssp TTCSEEEECSCG-GGHHHH-HHHHTTTSCTTCEEEECCCSC
T ss_pred hcCCEEEEECCh-hhhHHH-HHHhccccCCCceeEEecccc
Confidence 999999999995 233333 344556678999999998873
No 195
>3evn_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics; 2.00A {Streptococcus agalactiae serogroup V}
Probab=97.27 E-value=0.0013 Score=63.10 Aligned_cols=69 Identities=12% Similarity=0.154 Sum_probs=47.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+..++.+++.-++++. ++|++..... .+. +..+ . ...+.++++++. +.|+|++
T Consensus 6 ~rigiiG~G~ig~~~~~~l~~~~~~~~~av~d~~~~~~~-~~a-------~~~~---~-~~~~~~~~~ll~~~~~D~V~i 73 (329)
T 3evn_A 6 VRYGVVSTAKVAPRFIEGVRLAGNGEVVAVSSRTLESAQ-AFA-------NKYH---L-PKAYDKLEDMLADESIDVIYV 73 (329)
T ss_dssp EEEEEEBCCTTHHHHHHHHHHHCSEEEEEEECSCSSTTC-C----------CCC---C-SCEESCHHHHHTCTTCCEEEE
T ss_pred eEEEEEechHHHHHHHHHHHhCCCcEEEEEEcCCHHHHH-HHH-------HHcC---C-CcccCCHHHHhcCCCCCEEEE
Confidence 4799999999999999887544467755 6687764311 100 0111 1 113579999998 7999999
Q ss_pred ccCC
Q 016620 243 HPVL 246 (386)
Q Consensus 243 ~lPl 246 (386)
++|.
T Consensus 74 ~tp~ 77 (329)
T 3evn_A 74 ATIN 77 (329)
T ss_dssp CSCG
T ss_pred CCCc
Confidence 9995
No 196
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=97.26 E-value=0.00056 Score=57.96 Aligned_cols=100 Identities=9% Similarity=0.014 Sum_probs=58.2
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc---CCHHHH-hhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA---SSMDEV-LREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~l~el-l~~aDiV 240 (386)
.+++.|+|+|.+|+.+++.| ...|.+|.++|++.....+.....+ ..+.. ...... ..++++ +.++|.|
T Consensus 3 ~~~vlI~G~G~vG~~la~~L-~~~g~~V~vid~~~~~~~~~~~~~~-----~~~~~-~i~gd~~~~~~l~~a~i~~ad~v 75 (153)
T 1id1_A 3 KDHFIVCGHSILAINTILQL-NQRGQNVTVISNLPEDDIKQLEQRL-----GDNAD-VIPGDSNDSSVLKKAGIDRCRAI 75 (153)
T ss_dssp CSCEEEECCSHHHHHHHHHH-HHTTCCEEEEECCCHHHHHHHHHHH-----CTTCE-EEESCTTSHHHHHHHTTTTCSEE
T ss_pred CCcEEEECCCHHHHHHHHHH-HHCCCCEEEEECCChHHHHHHHHhh-----cCCCe-EEEcCCCCHHHHHHcChhhCCEE
Confidence 46799999999999999998 5789999999987432111110000 01100 000011 234444 7899999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+++++.... ++.-....+.+.+...+|...+
T Consensus 76 i~~~~~d~~--n~~~~~~a~~~~~~~~ii~~~~ 106 (153)
T 1id1_A 76 LALSDNDAD--NAFVVLSAKDMSSDVKTVLAVS 106 (153)
T ss_dssp EECSSCHHH--HHHHHHHHHHHTSSSCEEEECS
T ss_pred EEecCChHH--HHHHHHHHHHHCCCCEEEEEEC
Confidence 999986433 3333445555644444444333
No 197
>1tlt_A Putative oxidoreductase (virulence factor MVIM HO; structural genomics, NYSGXRC, PSI, protein structure initiative; 2.70A {Escherichia coli} SCOP: c.2.1.3 d.81.1.5
Probab=97.25 E-value=0.0015 Score=62.30 Aligned_cols=110 Identities=15% Similarity=0.199 Sum_probs=68.2
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.+|||||+|.||+. +++.+++.-++++. ++|++.... +.+.+.+ +.. .+.+++++..++|+|+++
T Consensus 6 ~~vgiiG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~~~~~-------g~~-----~~~~~~~l~~~~D~V~i~ 72 (319)
T 1tlt_A 6 LRIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKA-LPICESW-------RIP-----YADSLSSLAASCDAVFVH 72 (319)
T ss_dssp EEEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTH-HHHHHHH-------TCC-----BCSSHHHHHTTCSEEEEC
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCeEEEEEECCCHHHH-HHHHHHc-------CCC-----ccCcHHHhhcCCCEEEEe
Confidence 47999999999997 88877433478876 888876542 1211111 211 246777776789999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcce
Q 016620 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMFR 293 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~i~g 293 (386)
+|.... . +-....++.|. +++.- .-..+-+.+.|.++.++..+..
T Consensus 73 tp~~~h-~----~~~~~al~~G~~v~~eKP~~~~~~~~~~l~~~a~~~g~~~ 119 (319)
T 1tlt_A 73 SSTASH-F----DVVSTLLNAGVHVCVDKPLAENLRDAERLVELAARKKLTL 119 (319)
T ss_dssp SCTTHH-H----HHHHHHHHTTCEEEEESSSCSSHHHHHHHHHHHHHTTCCE
T ss_pred CCchhH-H----HHHHHHHHcCCeEEEeCCCCCCHHHHHHHHHHHHHcCCeE
Confidence 995332 1 11223345564 66652 2334456677888887765443
No 198
>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}
Probab=97.24 E-value=0.0013 Score=62.83 Aligned_cols=107 Identities=16% Similarity=0.245 Sum_probs=63.4
Q ss_pred eEEEEecChhHHHH-HHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 167 TVGVIGAGRIGSAY-ARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 167 ~vgIvG~G~IG~~i-A~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
+|||||+|.||+.+ ++.+++ -+.++. ++|++.... +.+.+. .+.. ..+.+++++++ ++|+|++
T Consensus 2 ~vgiiG~G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~-~~~~~~-------~g~~----~~~~~~~~~l~~~~~D~V~i 68 (332)
T 2glx_A 2 RWGLIGASTIAREWVIGAIRA-TGGEVVSMMSTSAERG-AAYATE-------NGIG----KSVTSVEELVGDPDVDAVYV 68 (332)
T ss_dssp EEEEESCCHHHHHTHHHHHHH-TTCEEEEEECSCHHHH-HHHHHH-------TTCS----CCBSCHHHHHTCTTCCEEEE
T ss_pred eEEEEcccHHHHHhhhHHhhc-CCCeEEEEECCCHHHH-HHHHHH-------cCCC----cccCCHHHHhcCCCCCEEEE
Confidence 79999999999998 777755 778865 678876542 221111 1111 13468999987 4999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCc
Q 016620 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~i 291 (386)
++|... .. +-....++.|. +++.- .-...-+.+.|.++.++..+
T Consensus 69 ~tp~~~--h~---~~~~~al~~Gk~v~~ekP~~~~~~~~~~l~~~a~~~g~ 114 (332)
T 2glx_A 69 STTNEL--HR---EQTLAAIRAGKHVLCEKPLAMTLEDAREMVVAAREAGV 114 (332)
T ss_dssp CSCGGG--HH---HHHHHHHHTTCEEEECSSSCSSHHHHHHHHHHHHHHTC
T ss_pred eCChhH--hH---HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHHcCC
Confidence 999432 11 11222344554 44432 12233444556666655433
No 199
>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}
Probab=97.22 E-value=0.0019 Score=61.90 Aligned_cols=68 Identities=25% Similarity=0.427 Sum_probs=49.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+..++.+.+.-++++. ++|++.... +.+.+. .+ .. +.+++++++ +.|+|++
T Consensus 4 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~-------~~-----~~-~~~~~~~l~~~~~D~V~i 69 (331)
T 4hkt_A 4 VRFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAA-EAIAGA-------YG-----CE-VRTIDAIEAAADIDAVVI 69 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHH-------TT-----CE-ECCHHHHHHCTTCCEEEE
T ss_pred eEEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHH-HHHHHH-------hC-----CC-cCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987543478877 688876542 221111 11 12 578999998 8999999
Q ss_pred ccCCC
Q 016620 243 HPVLD 247 (386)
Q Consensus 243 ~lPlt 247 (386)
|+|..
T Consensus 70 ~tp~~ 74 (331)
T 4hkt_A 70 CTPTD 74 (331)
T ss_dssp CSCGG
T ss_pred eCCch
Confidence 99953
No 200
>1iuk_A Hypothetical protein TT1466; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.70A {Thermus thermophilus} SCOP: c.2.1.8 PDB: 1iul_A
Probab=97.22 E-value=0.00082 Score=56.73 Aligned_cols=104 Identities=13% Similarity=0.132 Sum_probs=69.2
Q ss_pred CCCeEEEEec----ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 164 KGQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 164 ~g~~vgIvG~----G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.-++|+|||. |.+|..+++.| +..|.+|+..++..... .. .+...+.+++|+-...|+
T Consensus 12 ~p~~vaVvGas~~~g~~G~~~~~~l-~~~G~~v~~vnp~~~~~---------------~i--~G~~~~~sl~el~~~vDl 73 (140)
T 1iuk_A 12 QAKTIAVLGAHKDPSRPAHYVPRYL-REQGYRVLPVNPRFQGE---------------EL--FGEEAVASLLDLKEPVDI 73 (140)
T ss_dssp HCCEEEEETCCSSTTSHHHHHHHHH-HHTTCEEEEECGGGTTS---------------EE--TTEECBSSGGGCCSCCSE
T ss_pred CCCEEEEECCCCCCCChHHHHHHHH-HHCCCEEEEeCCCcccC---------------cC--CCEEecCCHHHCCCCCCE
Confidence 3468999999 89999999998 67888877777642110 00 112235678888888999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
+++++|. +....++ ++..+. ..+.++++.+-. ++++.+.+++..+.
T Consensus 74 avi~vp~-~~~~~v~-~~~~~~-gi~~i~~~~g~~----~~~~~~~a~~~Gir 119 (140)
T 1iuk_A 74 LDVFRPP-SALMDHL-PEVLAL-RPGLVWLQSGIR----HPEFEKALKEAGIP 119 (140)
T ss_dssp EEECSCH-HHHTTTH-HHHHHH-CCSCEEECTTCC----CHHHHHHHHHTTCC
T ss_pred EEEEeCH-HHHHHHH-HHHHHc-CCCEEEEcCCcC----HHHHHHHHHHcCCE
Confidence 9999996 5555665 344443 334566654332 57788888766543
No 201
>3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis}
Probab=97.19 E-value=0.002 Score=61.85 Aligned_cols=70 Identities=11% Similarity=0.136 Sum_probs=49.8
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+..++.+++.-++++. ++|++.... +.+.+.| +.. ..+.++++++. ++|+|++
T Consensus 6 ~~igiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~-------~~~----~~~~~~~~ll~~~~~D~V~i 73 (330)
T 3e9m_A 6 IRYGIMSTAQIVPRFVAGLRESAQAEVRGIASRRLENA-QKMAKEL-------AIP----VAYGSYEELCKDETIDIIYI 73 (330)
T ss_dssp EEEEECSCCTTHHHHHHHHHHSSSEEEEEEBCSSSHHH-HHHHHHT-------TCC----CCBSSHHHHHHCTTCSEEEE
T ss_pred EEEEEECchHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHHc-------CCC----ceeCCHHHHhcCCCCCEEEE
Confidence 5799999999999999988543477876 678876542 2222211 111 23578999998 8999999
Q ss_pred ccCCC
Q 016620 243 HPVLD 247 (386)
Q Consensus 243 ~lPlt 247 (386)
|+|..
T Consensus 74 ~tp~~ 78 (330)
T 3e9m_A 74 PTYNQ 78 (330)
T ss_dssp CCCGG
T ss_pred cCCCH
Confidence 99954
No 202
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=97.19 E-value=0.00079 Score=61.46 Aligned_cols=98 Identities=21% Similarity=0.180 Sum_probs=62.7
Q ss_pred cccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 159 ~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
..-.+.|++|.|||.|.+|..-++.| ...|++|+++++...+......+ .+. ..+....--++.+..+|
T Consensus 25 ifl~L~gk~VLVVGgG~va~~ka~~L-l~~GA~VtVvap~~~~~l~~l~~--------~~~--i~~i~~~~~~~dL~~ad 93 (223)
T 3dfz_A 25 VMLDLKGRSVLVVGGGTIATRRIKGF-LQEGAAITVVAPTVSAEINEWEA--------KGQ--LRVKRKKVGEEDLLNVF 93 (223)
T ss_dssp EEECCTTCCEEEECCSHHHHHHHHHH-GGGCCCEEEECSSCCHHHHHHHH--------TTS--CEEECSCCCGGGSSSCS
T ss_pred cEEEcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCCHHHHHHHH--------cCC--cEEEECCCCHhHhCCCC
Confidence 33579999999999999999999998 57899999999876654433221 111 11111111134567899
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+|+.++... +. |.......+ --++||++.
T Consensus 94 LVIaAT~d~-~~----N~~I~~~ak-~gi~VNvvD 122 (223)
T 3dfz_A 94 FIVVATNDQ-AV----NKFVKQHIK-NDQLVNMAS 122 (223)
T ss_dssp EEEECCCCT-HH----HHHHHHHSC-TTCEEEC--
T ss_pred EEEECCCCH-HH----HHHHHHHHh-CCCEEEEeC
Confidence 999887543 32 333444455 457788744
No 203
>3bio_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, MCSG, PSI-2, GFO/IDH/MO family, protein structure initiative; HET: MSE EPE; 1.80A {Porphyromonas gingivalis}
Probab=97.17 E-value=0.00063 Score=64.83 Aligned_cols=104 Identities=13% Similarity=0.119 Sum_probs=60.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
.+|||||+|.||+.+++.+++.-++++. ++|+++.... ..+ .......++.+. .++|+|++|+
T Consensus 10 irv~IIG~G~iG~~~~~~l~~~~~~elvav~d~~~~~~~------------~~g---~~~~~~~~l~~~-~~~DvViiat 73 (304)
T 3bio_A 10 IRAAIVGYGNIGRYALQALREAPDFEIAGIVRRNPAEVP------------FEL---QPFRVVSDIEQL-ESVDVALVCS 73 (304)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCTTEEEEEEECC-------------------CC---TTSCEESSGGGS-SSCCEEEECS
T ss_pred CEEEEECChHHHHHHHHHHhcCCCCEEEEEEcCCHHHHH------------HcC---CCcCCHHHHHhC-CCCCEEEECC
Confidence 4799999999999999987544578887 6888764311 111 112224455555 7899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCC--C-cccCHHHHHHHHHcCC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSR--G-PVIDEVALVEHLKQNP 290 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aR--g-~~vde~aL~~aL~~g~ 290 (386)
|... .. +-....++.|.-+++..= + .+.+.+.|.++.++..
T Consensus 74 p~~~--h~---~~~~~al~aG~~Vi~ekP~~a~~~~~~~~l~~~a~~~g 117 (304)
T 3bio_A 74 PSRE--VE---RTALEILKKGICTADSFDIHDGILALRRSLGDAAGKSG 117 (304)
T ss_dssp CHHH--HH---HHHHHHHTTTCEEEECCCCGGGHHHHHHHHHHHHHHHT
T ss_pred Cchh--hH---HHHHHHHHcCCeEEECCCCCCCCHHHHHHHHHHHHhCC
Confidence 9422 21 222334556666665421 2 2344466777766643
No 204
>1guz_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle, NAD; HET: NAD; 2.0A {Chlorobium vibrioforme} SCOP: c.2.1.5 d.162.1.1 PDB: 1gv1_A 1gv0_A*
Probab=97.16 E-value=0.0011 Score=63.28 Aligned_cols=78 Identities=18% Similarity=0.256 Sum_probs=49.0
Q ss_pred CeEEEEecChhHHHHHHHHHhc-CCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|+|.|.+|..+|..|++. +|.+|..+|++.........+.... ..... .........++++ ++.||+|++++
T Consensus 1 mkI~VIGaG~vG~~la~~la~~~~g~~V~l~D~~~~~~~~~~~~l~~~-~~~~~-~~~~i~~t~d~~~-l~~aDvViiav 77 (310)
T 1guz_A 1 MKITVIGAGNVGATTAFRLAEKQLARELVLLDVVEGIPQGKALDMYES-GPVGL-FDTKVTGSNDYAD-TANSDIVIITA 77 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSSSHHHHHHHHHHTT-HHHHT-CCCEEEEESCGGG-GTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHhHHhh-hhccc-CCcEEEECCCHHH-HCCCCEEEEeC
Confidence 4799999999999999988643 6889999999764321110000000 00000 1112222356766 89999999999
Q ss_pred CC
Q 016620 245 VL 246 (386)
Q Consensus 245 Pl 246 (386)
|.
T Consensus 78 ~~ 79 (310)
T 1guz_A 78 GL 79 (310)
T ss_dssp SC
T ss_pred CC
Confidence 74
No 205
>2v6b_A L-LDH, L-lactate dehydrogenase; oxidoreductase, radioresistance, NAD, cytoplasm, mesophilic, glycolysis; 2.50A {Deinococcus radiodurans}
Probab=97.15 E-value=0.00099 Score=63.50 Aligned_cols=121 Identities=16% Similarity=0.166 Sum_probs=66.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCC--CCccccccCCHHHHhhhCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDiVv 241 (386)
++|+|+|.|.+|..+|..|+ ..|. +|..+|++.... +..... +..... ...... ..+ .+.++.||+|+
T Consensus 1 mkI~VIGaG~vG~~la~~la-~~g~~~eV~L~D~~~~~~-~~~~~~----l~~~~~~~~~~~i~-~~~-~~a~~~aDvVI 72 (304)
T 2v6b_A 1 MKVGVVGTGFVGSTAAFALV-LRGSCSELVLVDRDEDRA-QAEAED----IAHAAPVSHGTRVW-HGG-HSELADAQVVI 72 (304)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHHH-HHHHHH----HTTSCCTTSCCEEE-EEC-GGGGTTCSEEE
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCCHHHH-HHHHHh----hhhhhhhcCCeEEE-ECC-HHHhCCCCEEE
Confidence 47999999999999999874 5577 999999976432 211110 111110 111111 134 35689999999
Q ss_pred EccCCChh-----------hhhcccH--HHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceE
Q 016620 242 LHPVLDKT-----------TYHLINK--ERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRV 294 (386)
Q Consensus 242 l~lPlt~~-----------t~~li~~--~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ga 294 (386)
++.+.... +..++.. +.+....+++++++++-+.=+....+.+.....++.|.
T Consensus 73 i~~~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~~~vi~~tNP~~~~~~~~~~~~~~~rviG~ 138 (304)
T 2v6b_A 73 LTAGANQKPGESRLDLLEKNADIFRELVPQITRAAPDAVLLVTSNPVDLLTDLATQLAPGQPVIGS 138 (304)
T ss_dssp ECC------------CHHHHHHHHHHHHHHHHHHCSSSEEEECSSSHHHHHHHHHHHSCSSCEEEC
T ss_pred EcCCCCCCCCCcHHHHHHhHHHHHHHHHHHHHHhCCCeEEEEecCchHHHHHHHHHhCChhcEEeC
Confidence 99953221 1111110 22233358889988765443333444444444455444
No 206
>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5
Probab=97.14 E-value=0.0009 Score=63.13 Aligned_cols=116 Identities=16% Similarity=0.213 Sum_probs=69.3
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc-cccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV-TWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~ell~~aDiV 240 (386)
++.|+++.|+|.|.||+++|+.| ...| +|++++|+.... ++..+.+.. .+.... ......++.+.+.++|+|
T Consensus 125 ~l~~k~vlV~GaGgiG~aia~~L-~~~G-~V~v~~r~~~~~-~~l~~~~~~----~~~~~~~~~~d~~~~~~~~~~~Dil 197 (287)
T 1nvt_A 125 RVKDKNIVIYGAGGAARAVAFEL-AKDN-NIIIANRTVEKA-EALAKEIAE----KLNKKFGEEVKFSGLDVDLDGVDII 197 (287)
T ss_dssp CCCSCEEEEECCSHHHHHHHHHH-TSSS-EEEEECSSHHHH-HHHHHHHHH----HHTCCHHHHEEEECTTCCCTTCCEE
T ss_pred CcCCCEEEEECchHHHHHHHHHH-HHCC-CEEEEECCHHHH-HHHHHHHhh----hcccccceeEEEeeHHHhhCCCCEE
Confidence 47899999999999999999998 5789 999999986532 221111100 000000 000111234557789999
Q ss_pred EEccCCChhhh---hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 241 SLHPVLDKTTY---HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 241 vl~lPlt~~t~---~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
+.++|...... ..+. ..+.++++++++|++... ..+. |.+..++
T Consensus 198 Vn~ag~~~~~~~~~~~~~--~~~~l~~~~~v~Dv~y~p-~~t~-ll~~a~~ 244 (287)
T 1nvt_A 198 INATPIGMYPNIDVEPIV--KAEKLREDMVVMDLIYNP-LETV-LLKEAKK 244 (287)
T ss_dssp EECSCTTCTTCCSSCCSS--CSTTCCSSSEEEECCCSS-SSCH-HHHHHHT
T ss_pred EECCCCCCCCCCCCCCCC--CHHHcCCCCEEEEeeeCC-ccCH-HHHHHHH
Confidence 99998643211 1120 134578899999998743 2333 4444443
No 207
>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}
Probab=97.14 E-value=0.0022 Score=61.65 Aligned_cols=111 Identities=14% Similarity=0.117 Sum_probs=66.5
Q ss_pred CeEEEEecChhHHHHHHHHH-hcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMV-EGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~-~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVv 241 (386)
.+|||||+|.||+..++.++ +.-++++ .++|++.... +.+.+ ..+.. ..+.+++++++ ++|+|+
T Consensus 9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~-~~~a~-------~~g~~----~~~~~~~~~l~~~~~D~V~ 76 (346)
T 3cea_A 9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQL-EWAKN-------ELGVE----TTYTNYKDMIDTENIDAIF 76 (346)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHH-HHHHH-------TTCCS----EEESCHHHHHTTSCCSEEE
T ss_pred ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHH-HHHHH-------HhCCC----cccCCHHHHhcCCCCCEEE
Confidence 47999999999999999874 3357885 5678876542 22111 11110 23468999987 699999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcC-Ccce
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQN-PMFR 293 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g-~i~g 293 (386)
+|+|.... . +-....++.|. +++.- .-..+-+.+.|.++.++. .+.-
T Consensus 77 i~tp~~~h-~----~~~~~al~~G~~v~~eKp~~~~~~~~~~l~~~a~~~~~~~~ 126 (346)
T 3cea_A 77 IVAPTPFH-P----EMTIYAMNAGLNVFCEKPLGLDFNEVDEMAKVIKSHPNQIF 126 (346)
T ss_dssp ECSCGGGH-H----HHHHHHHHTTCEEEECSCCCSCHHHHHHHHHHHHTCTTSCE
T ss_pred EeCChHhH-H----HHHHHHHHCCCEEEEcCCCCCCHHHHHHHHHHHHhCCCCeE
Confidence 99994321 1 22223345565 44431 112233445577777766 5443
No 208
>2d59_A Hypothetical protein PH1109; COA binding, structural genomics; 1.65A {Pyrococcus horikoshii} SCOP: c.2.1.8 PDB: 2d5a_A* 2e6u_X* 3qa9_A 3q9n_A* 3q9u_A*
Probab=97.13 E-value=0.0011 Score=56.16 Aligned_cols=101 Identities=9% Similarity=0.090 Sum_probs=68.6
Q ss_pred CCeEEEEec----ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 165 GQTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 165 g~~vgIvG~----G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
-++|+|||. |.+|..+++.| +..|.+|+..++.... .. +...+.+++|+....|++
T Consensus 22 p~~iaVVGas~~~g~~G~~~~~~l-~~~G~~v~~Vnp~~~~-----------------i~--G~~~y~sl~~l~~~vDlv 81 (144)
T 2d59_A 22 YKKIALVGASPKPERDANIVMKYL-LEHGYDVYPVNPKYEE-----------------VL--GRKCYPSVLDIPDKIEVV 81 (144)
T ss_dssp CCEEEEETCCSCTTSHHHHHHHHH-HHTTCEEEEECTTCSE-----------------ET--TEECBSSGGGCSSCCSEE
T ss_pred CCEEEEEccCCCCCchHHHHHHHH-HHCCCEEEEECCCCCe-----------------EC--CeeccCCHHHcCCCCCEE
Confidence 578999999 79999999998 5788888777765321 01 122356888888889999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++++|. +....++ ++..+ ...+.++++.+ . .++.+.+.+++..+.
T Consensus 82 vi~vp~-~~~~~vv-~~~~~-~gi~~i~~~~g--~--~~~~l~~~a~~~Gi~ 126 (144)
T 2d59_A 82 DLFVKP-KLTMEYV-EQAIK-KGAKVVWFQYN--T--YNREASKKADEAGLI 126 (144)
T ss_dssp EECSCH-HHHHHHH-HHHHH-HTCSEEEECTT--C--CCHHHHHHHHHTTCE
T ss_pred EEEeCH-HHHHHHH-HHHHH-cCCCEEEECCC--c--hHHHHHHHHHHcCCE
Confidence 999996 4455555 33333 23345665533 2 367788888876544
No 209
>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}
Probab=97.13 E-value=0.0021 Score=62.19 Aligned_cols=69 Identities=26% Similarity=0.404 Sum_probs=49.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcC-CcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh--hhCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGF-KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--READVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~f-g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--~~aDiVv 241 (386)
.+|||||+|.||+..++.+ +.. ++++. ++|++.... +.+.+.+ + ...+.++++++ .+.|+|+
T Consensus 6 ~~vgiiG~G~~g~~~~~~l-~~~~~~~lvav~d~~~~~~-~~~~~~~-------g-----~~~~~~~~~~l~~~~~D~V~ 71 (354)
T 3db2_A 6 VGVAAIGLGRWAYVMADAY-TKSEKLKLVTCYSRTEDKR-EKFGKRY-------N-----CAGDATMEALLAREDVEMVI 71 (354)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTCSSEEEEEEECSSHHHH-HHHHHHH-------T-----CCCCSSHHHHHHCSSCCEEE
T ss_pred ceEEEEccCHHHHHHHHHH-HhCCCcEEEEEECCCHHHH-HHHHHHc-------C-----CCCcCCHHHHhcCCCCCEEE
Confidence 4799999999999999987 455 88865 778876542 2221111 2 11357899999 5699999
Q ss_pred EccCCCh
Q 016620 242 LHPVLDK 248 (386)
Q Consensus 242 l~lPlt~ 248 (386)
+|+|...
T Consensus 72 i~tp~~~ 78 (354)
T 3db2_A 72 ITVPNDK 78 (354)
T ss_dssp ECSCTTS
T ss_pred EeCChHH
Confidence 9999643
No 210
>2hjr_A Malate dehydrogenase; malaria, structural genomics, structural genomics consortium, SGC, oxidoreductase; HET: CIT APR; 2.20A {Cryptosporidium parvum}
Probab=97.11 E-value=0.0019 Score=62.32 Aligned_cols=75 Identities=21% Similarity=0.395 Sum_probs=47.7
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|||.|.+|..+|..|+ ..|. +|..||++.........+.. ....... .........++ +.+++||+|+++.
T Consensus 15 ~kI~ViGaG~vG~~iA~~la-~~g~~~V~L~Di~~~~l~~~~~~l~-~~~~~~~-~~~~i~~t~d~-~al~~aD~VI~av 90 (328)
T 2hjr_A 15 KKISIIGAGQIGSTIALLLG-QKDLGDVYMFDIIEGVPQGKALDLN-HCMALIG-SPAKIFGENNY-EYLQNSDVVIITA 90 (328)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSTTHHHHHHHHHH-HHHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEECCHHHHHHHHHHHH-hHhhccC-CCCEEEECCCH-HHHCCCCEEEEcC
Confidence 68999999999999999885 4566 89999998643221111100 0011111 11222233566 6789999999998
No 211
>1hyh_A L-hicdh, L-2-hydroxyisocaproate dehydrogenase; L-2-hydroxycarboxylate dehydrogenase, L-lactate dehydrogenas oxidoreductase (CHOH(D)-NAD+(A)); HET: NAD; 2.20A {Weissella confusa} SCOP: c.2.1.5 d.162.1.1
Probab=97.10 E-value=0.002 Score=61.28 Aligned_cols=77 Identities=17% Similarity=0.199 Sum_probs=47.8
Q ss_pred CeEEEEecChhHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
++|+|||.|.||..+|..|++ .| .+|..||++.... +.....+.......+ ...... ..++ +.++.||+|+++
T Consensus 2 ~kI~VIGaG~~G~~la~~L~~-~g~~~~V~l~d~~~~~~-~~~~~~l~~~~~~~~-~~~~~~-~~d~-~~~~~aDvViia 76 (309)
T 1hyh_A 2 RKIGIIGLGNVGAAVAHGLIA-QGVADDYVFIDANEAKV-KADQIDFQDAMANLE-AHGNIV-INDW-AALADADVVIST 76 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHHH-HTCCSEEEEECSSHHHH-HHHHHHHHHHGGGSS-SCCEEE-ESCG-GGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHHh-CCCCCEEEEEcCCHHHH-HHHHHHHHhhhhhcC-CCeEEE-eCCH-HHhCCCCEEEEe
Confidence 479999999999999998853 35 6899999986432 111111000000000 011111 2466 678999999999
Q ss_pred cCCC
Q 016620 244 PVLD 247 (386)
Q Consensus 244 lPlt 247 (386)
+|..
T Consensus 77 v~~~ 80 (309)
T 1hyh_A 77 LGNI 80 (309)
T ss_dssp CSCG
T ss_pred cCCc
Confidence 9863
No 212
>3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua}
Probab=97.09 E-value=0.0023 Score=62.20 Aligned_cols=68 Identities=19% Similarity=0.289 Sum_probs=48.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+..++.+.+.-++++. ++|++..... ... ..+ ...+.+++++++ +.|+|++
T Consensus 6 ~~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~--~a~-------~~g-----~~~~~~~~~ll~~~~~D~V~i 71 (359)
T 3e18_A 6 YQLVIVGYGGMGSYHVTLASAADNLEVHGVFDILAEKRE--AAA-------QKG-----LKIYESYEAVLADEKVDAVLI 71 (359)
T ss_dssp EEEEEECCSHHHHHHHHHHHTSTTEEEEEEECSSHHHHH--HHH-------TTT-----CCBCSCHHHHHHCTTCCEEEE
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEEEcCCHHHHH--HHH-------hcC-----CceeCCHHHHhcCCCCCEEEE
Confidence 4799999999999999987433378876 5688765421 111 111 224579999998 7899999
Q ss_pred ccCCC
Q 016620 243 HPVLD 247 (386)
Q Consensus 243 ~lPlt 247 (386)
|+|..
T Consensus 72 ~tp~~ 76 (359)
T 3e18_A 72 ATPND 76 (359)
T ss_dssp CSCGG
T ss_pred cCCcH
Confidence 99953
No 213
>3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima}
Probab=97.08 E-value=0.0025 Score=61.35 Aligned_cols=70 Identities=21% Similarity=0.239 Sum_probs=49.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+..++.+++.-++++. ++|++.... +.+.+.+ +. ...+.+++++++ ++|+|++
T Consensus 3 ~rvgiIG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~-~~~~~~~-------~~----~~~~~~~~~ll~~~~~D~V~i 70 (344)
T 3ezy_A 3 LRIGVIGLGRIGTIHAENLKMIDDAILYAISDVREDRL-REMKEKL-------GV----EKAYKDPHELIEDPNVDAVLV 70 (344)
T ss_dssp EEEEEECCSHHHHHHHHHGGGSTTEEEEEEECSCHHHH-HHHHHHH-------TC----SEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEEcCCHHHHHHHHHHHhCCCcEEEEEECCCHHHH-HHHHHHh-------CC----CceeCCHHHHhcCCCCCEEEE
Confidence 3799999999999999987443478876 678876542 2222211 11 113579999998 8999999
Q ss_pred ccCCC
Q 016620 243 HPVLD 247 (386)
Q Consensus 243 ~lPlt 247 (386)
|+|..
T Consensus 71 ~tp~~ 75 (344)
T 3ezy_A 71 CSSTN 75 (344)
T ss_dssp CSCGG
T ss_pred cCCCc
Confidence 99953
No 214
>1xea_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, protein structure initiative, NYSGXRC, VCA1048, GFO/IDH/MOCA family oxidoreductase; 2.65A {Vibrio cholerae} SCOP: c.2.1.3 d.81.1.5
Probab=97.01 E-value=0.0031 Score=60.17 Aligned_cols=111 Identities=14% Similarity=0.161 Sum_probs=64.0
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh-hhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiVvl~ 243 (386)
.+|||||+|.||+. +++.+++.-+.++.++|++.... +++.+.| +... .+.+..+++ .++|+|++|
T Consensus 3 ~~igiIG~G~ig~~~~~~~l~~~~~~~l~v~d~~~~~~-~~~a~~~-------g~~~----~~~~~~~~l~~~~D~V~i~ 70 (323)
T 1xea_A 3 LKIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVL-GTLATRY-------RVSA----TCTDYRDVLQYGVDAVMIH 70 (323)
T ss_dssp EEEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHH-HHHHHHT-------TCCC----CCSSTTGGGGGCCSEEEEC
T ss_pred cEEEEECCCHHHHHHHHHHHHhCCCceEEEEeCCHHHH-HHHHHHc-------CCCc----cccCHHHHhhcCCCEEEEE
Confidence 37999999999994 88887433378888999887542 2221111 2110 022333445 689999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcce
Q 016620 244 PVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMFR 293 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~i~g 293 (386)
+|... .. +-....++.|. +++.- .--.+-+.+.|.++.++..+..
T Consensus 71 tp~~~--h~---~~~~~al~~Gk~V~~EKP~~~~~~~~~~l~~~a~~~g~~~ 117 (323)
T 1xea_A 71 AATDV--HS---TLAAFFLHLGIPTFVDKPLAASAQECENLYELAEKHHQPL 117 (323)
T ss_dssp SCGGG--HH---HHHHHHHHTTCCEEEESCSCSSHHHHHHHHHHHHHTTCCE
T ss_pred CCchh--HH---HHHHHHHHCCCeEEEeCCCcCCHHHHHHHHHHHHhcCCeE
Confidence 99422 21 11222344453 66652 1223345567888877765543
No 215
>3e82_A Putative oxidoreductase; NAD, GFO/IDH/MOCA family, PSI-2, NYSGXRC, 11136F, structural genomics, protein structure initiative; 2.04A {Klebsiella pneumoniae subsp}
Probab=97.00 E-value=0.0031 Score=61.38 Aligned_cols=67 Identities=13% Similarity=0.137 Sum_probs=47.0
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEE
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVv 241 (386)
.+|||||+|.||+. .++.+++.-+++|. ++|++....... .. ....+.+++++++ +.|+|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~-----------~~----~~~~~~~~~~ll~~~~~D~V~ 72 (364)
T 3e82_A 8 INIALIGYGFVGKTFHAPLIRSVPGLNLAFVASRDEEKVKRD-----------LP----DVTVIASPEAAVQHPDVDLVV 72 (364)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHHH-----------CT----TSEEESCHHHHHTCTTCSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh-----------CC----CCcEECCHHHHhcCCCCCEEE
Confidence 47999999999997 67766333378875 678876542111 00 1224579999998 789999
Q ss_pred EccCCC
Q 016620 242 LHPVLD 247 (386)
Q Consensus 242 l~lPlt 247 (386)
+|+|..
T Consensus 73 i~tp~~ 78 (364)
T 3e82_A 73 IASPNA 78 (364)
T ss_dssp ECSCGG
T ss_pred EeCChH
Confidence 999953
No 216
>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*
Probab=96.98 E-value=0.0031 Score=60.92 Aligned_cols=69 Identities=22% Similarity=0.304 Sum_probs=49.7
Q ss_pred CeEEEEecChhHHHHHHHHHhc-CCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG-FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~-fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVv 241 (386)
.+|||||+|.||+..++.+++. -++++. ++|++.... +.+.+.+ + ...+.+++++++ +.|+|+
T Consensus 14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~~~~~-------~-----~~~~~~~~~ll~~~~~D~V~ 80 (354)
T 3q2i_A 14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAAL-KAAVERT-------G-----ARGHASLTDMLAQTDADIVI 80 (354)
T ss_dssp EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHH-HHHHHHH-------C-----CEEESCHHHHHHHCCCSEEE
T ss_pred ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHH-HHHHHHc-------C-----CceeCCHHHHhcCCCCCEEE
Confidence 5799999999999999987433 378865 788876542 2221111 2 224579999997 799999
Q ss_pred EccCCC
Q 016620 242 LHPVLD 247 (386)
Q Consensus 242 l~lPlt 247 (386)
+|+|..
T Consensus 81 i~tp~~ 86 (354)
T 3q2i_A 81 LTTPSG 86 (354)
T ss_dssp ECSCGG
T ss_pred ECCCcH
Confidence 999953
No 217
>1t2d_A LDH-P, L-lactate dehydrogenase; ternary complex, oxidoreductase; HET: NAD; 1.10A {Plasmodium falciparum} SCOP: c.2.1.5 d.162.1.1 PDB: 1t25_A* 1t26_A* 1t2c_A* 1t24_A* 2x8l_A 2ydn_A* 2a94_A* 1u4s_A* 1u5a_A* 1u5c_A* 1u4o_A* 1t2e_A* 1xiv_A* 1ceq_A 1ldg_A* 1cet_A* 1oc4_A* 2a92_A* 2aa3_A*
Probab=96.97 E-value=0.0029 Score=60.81 Aligned_cols=78 Identities=14% Similarity=0.223 Sum_probs=48.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|||.|.+|..+|..|+ .-|. +|..+|.+.... +.............. .........++ +.+++||+|+++.
T Consensus 5 ~kI~VIGaG~vG~~ia~~la-~~g~~~v~L~Di~~~~l-~~~~~~l~~~~~~~~-~~~~i~~t~d~-~al~~aD~Vi~a~ 80 (322)
T 1t2d_A 5 AKIVLVGSGMIGGVMATLIV-QKNLGDVVLFDIVKNMP-HGKALDTSHTNVMAY-SNCKVSGSNTY-DDLAGADVVIVTA 80 (322)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHH-HHHHHHHHTHHHHHT-CCCCEEEECCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCHHHH-HHHHHHHHhhhhhcC-CCcEEEECCCH-HHhCCCCEEEEeC
Confidence 58999999999999999885 4465 799999876432 111110000011111 11222233567 7789999999998
Q ss_pred --CCC
Q 016620 245 --VLD 247 (386)
Q Consensus 245 --Plt 247 (386)
|..
T Consensus 81 g~p~k 85 (322)
T 1t2d_A 81 GFTKA 85 (322)
T ss_dssp SCSSC
T ss_pred CCCCC
Confidence 543
No 218
>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.94 E-value=0.0019 Score=65.29 Aligned_cols=101 Identities=16% Similarity=0.212 Sum_probs=58.2
Q ss_pred cccccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC--ccccccCCHHHHhhh
Q 016620 159 VGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLRE 236 (386)
Q Consensus 159 ~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ell~~ 236 (386)
.+..+.+++|+|+|.|.+|+.+++.|++..|.+|.+++|+.... ++..+ ..+... .......++.++++.
T Consensus 17 ~~~~l~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka-~~la~-------~~~~~~~~~D~~d~~~l~~~l~~ 88 (467)
T 2axq_A 17 IEGRHMGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANA-QALAK-------PSGSKAISLDVTDDSALDKVLAD 88 (467)
T ss_dssp ------CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHH-HHHHG-------GGTCEEEECCTTCHHHHHHHHHT
T ss_pred cccCCCCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHH-HHHHH-------hcCCcEEEEecCCHHHHHHHHcC
Confidence 44678899999999999999999998543478999999986542 11110 001100 000111256677889
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~a 272 (386)
+|+|+.++|..-. .. +... .++.|..+++++
T Consensus 89 ~DvVIn~tp~~~~-~~-v~~a---~l~~g~~vvd~~ 119 (467)
T 2axq_A 89 NDVVISLIPYTFH-PN-VVKS---AIRTKTDVVTSS 119 (467)
T ss_dssp SSEEEECSCGGGH-HH-HHHH---HHHHTCEEEECS
T ss_pred CCEEEECCchhhh-HH-HHHH---HHhcCCEEEEee
Confidence 9999999995321 11 1122 234566666654
No 219
>1ldn_A L-lactate dehydrogenase; oxidoreductase(CHOH(D)-NAD(A)); HET: FBP NAD; 2.50A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1ldb_A 2ldb_A*
Probab=96.94 E-value=0.0025 Score=61.05 Aligned_cols=76 Identities=21% Similarity=0.277 Sum_probs=47.4
Q ss_pred CCeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHH-HhhhhhhhhhcCCC--CccccccCCHHHHhhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKF-VTAYGQFLKANGEQ--PVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~l~ell~~aDiV 240 (386)
-++|+|||.|.||.++|..++. ++.-+|..+|++.. ..+.. .+. .+..... ..... .+..+.+++||+|
T Consensus 6 ~~kI~IIGaG~vG~sla~~l~~~~~~~ev~l~Di~~~-~~~~~~~dl----~~~~~~~~~~~~i~--~~~~~al~~aDvV 78 (316)
T 1ldn_A 6 GARVVVIGAGFVGASYVFALMNQGIADEIVLIDANES-KAIGDAMDF----NHGKVFAPKPVDIW--HGDYDDCRDADLV 78 (316)
T ss_dssp SCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHH-HHHHHHHHH----HHHTTSSSSCCEEE--ECCGGGTTTCSEE
T ss_pred CCEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCcc-hHHHHHhhH----HHHhhhcCCCeEEE--cCcHHHhCCCCEE
Confidence 3689999999999999988743 33348999999864 22221 111 1111111 11111 2335678999999
Q ss_pred EEccCCC
Q 016620 241 SLHPVLD 247 (386)
Q Consensus 241 vl~lPlt 247 (386)
+++.|..
T Consensus 79 iia~~~~ 85 (316)
T 1ldn_A 79 VICAGAN 85 (316)
T ss_dssp EECCSCC
T ss_pred EEcCCCC
Confidence 9997653
No 220
>1ydw_A AX110P-like protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT4G09670; 2.49A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.5 PDB: 2q4e_A
Probab=96.92 E-value=0.008 Score=58.21 Aligned_cols=114 Identities=17% Similarity=0.111 Sum_probs=69.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVvl 242 (386)
.+|||||+|.||+.+++.+.+.-++++ .++|++.... +.+.+.+ +... ....+.+++++++ +.|+|++
T Consensus 7 ~~vgiiG~G~ig~~~~~~l~~~~~~~lv~v~d~~~~~~-~~~a~~~-------~~~~-~~~~~~~~~~ll~~~~~D~V~i 77 (362)
T 1ydw_A 7 IRIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKA-KAFATAN-------NYPE-STKIHGSYESLLEDPEIDALYV 77 (362)
T ss_dssp EEEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHH-HHHHHHT-------TCCT-TCEEESSHHHHHHCTTCCEEEE
T ss_pred eEEEEECchHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHh-------CCCC-CCeeeCCHHHHhcCCCCCEEEE
Confidence 479999999999999988743346776 4778876542 2222211 2100 1223578999997 5999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcce
Q 016620 243 HPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMFR 293 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~i~g 293 (386)
|+|... .. +-....++.|. +++.- ---.+-+.++|.++.++..+..
T Consensus 78 ~tp~~~--h~---~~~~~al~aGk~V~~EKP~a~~~~e~~~l~~~a~~~g~~~ 125 (362)
T 1ydw_A 78 PLPTSL--HV---EWAIKAAEKGKHILLEKPVAMNVTEFDKIVDACEANGVQI 125 (362)
T ss_dssp CCCGGG--HH---HHHHHHHTTTCEEEECSSCSSSHHHHHHHHHHHHTTTCCE
T ss_pred cCChHH--HH---HHHHHHHHCCCeEEEecCCcCCHHHHHHHHHHHHHcCCEE
Confidence 999422 21 22233455665 45442 1223445577888888765543
No 221
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=96.92 E-value=0.0024 Score=57.30 Aligned_cols=96 Identities=15% Similarity=0.112 Sum_probs=56.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccC---CHHHH-hhhCCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS---SMDEV-LREADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~el-l~~aDiVv 241 (386)
++|.|+|+|.+|+.+|+.| ...|.+|.++|+++.... .... ..+. ........ .++++ +.++|+|+
T Consensus 1 M~iiIiG~G~~G~~la~~L-~~~g~~v~vid~~~~~~~-~l~~-------~~~~-~~i~gd~~~~~~l~~a~i~~ad~vi 70 (218)
T 3l4b_C 1 MKVIIIGGETTAYYLARSM-LSRKYGVVIINKDRELCE-EFAK-------KLKA-TIIHGDGSHKEILRDAEVSKNDVVV 70 (218)
T ss_dssp CCEEEECCHHHHHHHHHHH-HHTTCCEEEEESCHHHHH-HHHH-------HSSS-EEEESCTTSHHHHHHHTCCTTCEEE
T ss_pred CEEEEECCCHHHHHHHHHH-HhCCCeEEEEECCHHHHH-HHHH-------HcCC-eEEEcCCCCHHHHHhcCcccCCEEE
Confidence 4799999999999999998 578999999998775421 1100 0111 00000112 23443 67899999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+++|.+..+ ++-......+.+...+|-..+
T Consensus 71 ~~~~~d~~n--~~~~~~a~~~~~~~~iia~~~ 100 (218)
T 3l4b_C 71 ILTPRDEVN--LFIAQLVMKDFGVKRVVSLVN 100 (218)
T ss_dssp ECCSCHHHH--HHHHHHHHHTSCCCEEEECCC
T ss_pred EecCCcHHH--HHHHHHHHHHcCCCeEEEEEe
Confidence 999964433 333344444333444444333
No 222
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=96.91 E-value=0.0013 Score=64.12 Aligned_cols=93 Identities=18% Similarity=0.175 Sum_probs=55.6
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
+.++|+|+|.|.+|+.+|+.|++ ..+|.+.|++.+..... .. .............++.++++++|+|+.+
T Consensus 15 ~~mkilvlGaG~vG~~~~~~L~~--~~~v~~~~~~~~~~~~~--~~------~~~~~~~d~~d~~~l~~~~~~~DvVi~~ 84 (365)
T 3abi_A 15 RHMKVLILGAGNIGRAIAWDLKD--EFDVYIGDVNNENLEKV--KE------FATPLKVDASNFDKLVEVMKEFELVIGA 84 (365)
T ss_dssp -CCEEEEECCSHHHHHHHHHHTT--TSEEEEEESCHHHHHHH--TT------TSEEEECCTTCHHHHHHHHTTCSEEEEC
T ss_pred CccEEEEECCCHHHHHHHHHHhc--CCCeEEEEcCHHHHHHH--hc------cCCcEEEecCCHHHHHHHHhCCCEEEEe
Confidence 34579999999999999999843 46888888876542111 00 0000001111234577889999999999
Q ss_pred cCCChhhhhcccHHHH-hcCCCCcEEEEcC
Q 016620 244 PVLDKTTYHLINKERL-ATMKKEAILVNCS 272 (386)
Q Consensus 244 lPlt~~t~~li~~~~~-~~mk~gailIN~a 272 (386)
+|.. . +.... ..++.|.-+++++
T Consensus 85 ~p~~---~---~~~v~~~~~~~g~~yvD~s 108 (365)
T 3abi_A 85 LPGF---L---GFKSIKAAIKSKVDMVDVS 108 (365)
T ss_dssp CCGG---G---HHHHHHHHHHHTCEEEECC
T ss_pred cCCc---c---cchHHHHHHhcCcceEeee
Confidence 9953 1 12222 1234566666665
No 223
>1a5z_A L-lactate dehydrogenase; oxidoreductase, glycolysis, hyperthermophiles, thermotoga MA protein stability; HET: FBP NAD; 2.10A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.1
Probab=96.90 E-value=0.0018 Score=62.15 Aligned_cols=104 Identities=17% Similarity=0.203 Sum_probs=59.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
++|+|||.|.||..+|..|+ ..|. +|..+|++.... +.....+..... .. ...... ..+ .+.++.||+|+++
T Consensus 1 mkI~VIGaG~~G~~la~~l~-~~g~~~~V~l~D~~~~~~-~~~~~~l~~~~~-~~-~~~~i~-~~d-~~~~~~aDvViia 74 (319)
T 1a5z_A 1 MKIGIVGLGRVGSSTAFALL-MKGFAREMVLIDVDKKRA-EGDALDLIHGTP-FT-RRANIY-AGD-YADLKGSDVVIVA 74 (319)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSSHHHH-HHHHHHHHHHGG-GS-CCCEEE-ECC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEeCChHHH-HHHHHHHHhhhh-hc-CCcEEE-eCC-HHHhCCCCEEEEc
Confidence 47999999999999999875 4466 999999986432 111100000000 00 011111 134 3567899999999
Q ss_pred cCCChh---hh-hcc------cHHHHhcC---CCCcEEEEcCCCc
Q 016620 244 PVLDKT---TY-HLI------NKERLATM---KKEAILVNCSRGP 275 (386)
Q Consensus 244 lPlt~~---t~-~li------~~~~~~~m---k~gailIN~aRg~ 275 (386)
+|.... ++ .++ -.+.+..+ .+.+++|+++-+.
T Consensus 75 v~~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~~~~~ii~~tNp~ 119 (319)
T 1a5z_A 75 AGVPQKPGETRLQLLGRNARVMKEIARNVSKYAPDSIVIVVTNPV 119 (319)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSSSH
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeCCcH
Confidence 986331 01 110 12222222 4788888876543
No 224
>1vlv_A Otcase, ornithine carbamoyltransferase; TM1097, structural genomics, protein structure initiative, PSI, joint center for structu genomics; 2.25A {Thermotoga maritima} SCOP: c.78.1.1 c.78.1.1
Probab=96.90 E-value=0.1 Score=49.96 Aligned_cols=106 Identities=19% Similarity=0.239 Sum_probs=68.8
Q ss_pred ccCCCeEEEEecC--hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 162 ~l~g~~vgIvG~G--~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+...+...+..+..| ..+....+++|.++++|+
T Consensus 164 ~l~gl~va~vGD~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 239 (325)
T 1vlv_A 164 RLKGVKVVFMGDTRNNVATSLMIAC-AKMGMNFVACGPEELKPRSDVFKRCQEIVKETD---GSVSFTSNLEEALAGADV 239 (325)
T ss_dssp CSTTCEEEEESCTTSHHHHHHHHHH-HHTTCEEEEESCGGGCCCHHHHHHHHHHHHHHC---CEEEEESCHHHHHTTCSE
T ss_pred CcCCcEEEEECCCCcCcHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEcCHHHHHccCCE
Confidence 4889999999985 9999999987 579999999987542111111110000001112 123345789999999999
Q ss_pred EEEccCCC-------hh-----hhhcccHHHHhcC-CCCcEEEEc
Q 016620 240 ISLHPVLD-------KT-----TYHLINKERLATM-KKEAILVNC 271 (386)
Q Consensus 240 Vvl~lPlt-------~~-----t~~li~~~~~~~m-k~gailIN~ 271 (386)
|..-.-.. ++ ...-++.+.++.+ |++++|.-+
T Consensus 240 vyt~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~k~dai~mH~ 284 (325)
T 1vlv_A 240 VYTDVWASMGEEDKEKERMALLKPYQVNERVMEMTGKSETIFMHC 284 (325)
T ss_dssp EEECCCC----------CHHHHGGGCBCHHHHHTTCCTTCEEEEC
T ss_pred EEeccccccccccchHhHHHHHhhcCCCHHHHHhccCCCeEEECC
Confidence 98854411 11 1245688888888 888888776
No 225
>3mz0_A Inositol 2-dehydrogenase/D-chiro-inositol 3-dehyd; MYO-inositol dehydrogenase, bsidh, oxidoreductase; HET: MSE PGE; 1.54A {Bacillus subtilis} PDB: 3nt2_A* 3nt4_A* 3nt5_A* 3nto_A* 3ntq_A* 3ntr_A*
Probab=96.89 E-value=0.0033 Score=60.49 Aligned_cols=71 Identities=21% Similarity=0.270 Sum_probs=49.6
Q ss_pred CeEEEEecChhHHHHHHHHH-hcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~-~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiVv 241 (386)
.+|||||+|.||+..++.++ +.-++++. ++|++.... +.+.+.| +. ....+.++++++++ .|+|+
T Consensus 3 ~rigiIG~G~~g~~~~~~l~~~~~~~~l~av~d~~~~~~-~~~~~~~-------g~---~~~~~~~~~~ll~~~~~D~V~ 71 (344)
T 3mz0_A 3 LRIGVIGTGAIGKEHINRITNKLSGAEIVAVTDVNQEAA-QKVVEQY-------QL---NATVYPNDDSLLADENVDAVL 71 (344)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTCSSEEEEEEECSSHHHH-HHHHHHT-------TC---CCEEESSHHHHHHCTTCCEEE
T ss_pred EEEEEECccHHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHh-------CC---CCeeeCCHHHHhcCCCCCEEE
Confidence 37999999999999999875 33578866 678876542 2221111 11 12245799999986 89999
Q ss_pred EccCCC
Q 016620 242 LHPVLD 247 (386)
Q Consensus 242 l~lPlt 247 (386)
+|+|..
T Consensus 72 i~tp~~ 77 (344)
T 3mz0_A 72 VTSWGP 77 (344)
T ss_dssp ECSCGG
T ss_pred ECCCch
Confidence 999953
No 226
>3g17_A Similar to 2-dehydropantoate 2-reductase; structural genomics, putative 2-dehydropantoate 2-reductase, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=96.87 E-value=0.00024 Score=67.28 Aligned_cols=98 Identities=13% Similarity=0.085 Sum_probs=61.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh-hhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiVvl~l 244 (386)
++|+|||.|.||..+|..|+ .-|.+|.+|+|+.... . .....+..+... ..+..+.+ ..+|+|++++
T Consensus 3 mkI~iiGaGa~G~~~a~~L~-~~g~~V~~~~r~~~~~-~--------~~~~~g~~~~~~--~~~~~~~~~~~~D~vilav 70 (294)
T 3g17_A 3 LSVAIIGPGAVGTTIAYELQ-QSLPHTTLIGRHAKTI-T--------YYTVPHAPAQDI--VVKGYEDVTNTFDVIIIAV 70 (294)
T ss_dssp CCEEEECCSHHHHHHHHHHH-HHCTTCEEEESSCEEE-E--------EESSTTSCCEEE--EEEEGGGCCSCEEEEEECS
T ss_pred cEEEEECCCHHHHHHHHHHH-HCCCeEEEEEeccCcE-E--------EEecCCeeccce--ecCchHhcCCCCCEEEEeC
Confidence 57999999999999999985 4577899999875321 0 001112111111 12333443 7899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCccc
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGPVI 277 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~~v 277 (386)
|.. ++...+ ++.-..+++++++|.+.-|=-.
T Consensus 71 k~~-~~~~~l-~~l~~~l~~~~~iv~~~nGi~~ 101 (294)
T 3g17_A 71 KTH-QLDAVI-PHLTYLAHEDTLIILAQNGYGQ 101 (294)
T ss_dssp CGG-GHHHHG-GGHHHHEEEEEEEEECCSSCCC
T ss_pred Ccc-CHHHHH-HHHHHhhCCCCEEEEeccCccc
Confidence 953 344443 3333456678888888776433
No 227
>1oju_A MDH, malate dehydrogenase; hyperthermophilic, oxidoreductase; HET: ENA; 2.79A {Archaeoglobus fulgidus} PDB: 1ojs_A* 2x0i_A* 2x0j_A*
Probab=96.86 E-value=0.0053 Score=58.25 Aligned_cols=110 Identities=16% Similarity=0.209 Sum_probs=64.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
++|+|+|.|.+|.++|..|+ ..|. +|..||+..........+.... ...-..+.......+ .+.+++||+|+++
T Consensus 1 MkI~ViGaG~vG~~la~~l~-~~~~~~~v~L~D~~~~~~~g~~~dl~~~--~~~~~~~~~i~~t~d-~~a~~~aDiVVia 76 (294)
T 1oju_A 1 MKLGFVGAGRVGSTSAFTCL-LNLDVDEIALVDIAEDLAVGEAMDLAHA--AAGIDKYPKIVGGAD-YSLLKGSEIIVVT 76 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HHSCCSEEEEECSSHHHHHHHHHHHHHH--HHTTTCCCEEEEESC-GGGGTTCSEEEEC
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECChHHHHHHHHHHHhh--hhhcCCCCEEEEeCC-HHHhCCCCEEEEC
Confidence 47999999999999999875 3455 8999999875421111111000 000011222222345 7889999999999
Q ss_pred cCCCh---hhh-hcc--cH-------HHHhcCCCCcEEEEcCCCcccCHHH
Q 016620 244 PVLDK---TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVA 281 (386)
Q Consensus 244 lPlt~---~t~-~li--~~-------~~~~~mk~gailIN~aRg~~vde~a 281 (386)
.+... .++ .++ |. +.+....|.+++++++ ..+|.-.
T Consensus 77 ag~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvs--NPvd~~t 125 (294)
T 1oju_A 77 AGLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVT--NPMDVMT 125 (294)
T ss_dssp CCCCCCSSCCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECS--SSHHHHH
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEeC--CcchHHH
Confidence 75431 111 111 11 2344457899999998 4555433
No 228
>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*
Probab=96.86 E-value=0.0043 Score=60.01 Aligned_cols=70 Identities=14% Similarity=0.133 Sum_probs=48.6
Q ss_pred CCeEEEEecChhHH-HHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEE
Q 016620 165 GQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~-~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (386)
-.+|||||+|.||+ .+++.+.+.-++++. ++|++.... +.+.+.| + ...+.+++++++ +.|+|
T Consensus 27 ~~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g-----~~~~~~~~~ll~~~~~D~V 93 (350)
T 3rc1_A 27 PIRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRA-KRFTERF-------G-----GEPVEGYPALLERDDVDAV 93 (350)
T ss_dssp CEEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHH-HHHHHHH-------C-----SEEEESHHHHHTCTTCSEE
T ss_pred ceEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHH-HHHHHHc-------C-----CCCcCCHHHHhcCCCCCEE
Confidence 35799999999999 788887433378876 778876432 2222211 1 122478999997 58999
Q ss_pred EEccCCC
Q 016620 241 SLHPVLD 247 (386)
Q Consensus 241 vl~lPlt 247 (386)
++|+|..
T Consensus 94 ~i~tp~~ 100 (350)
T 3rc1_A 94 YVPLPAV 100 (350)
T ss_dssp EECCCGG
T ss_pred EECCCcH
Confidence 9999953
No 229
>1pvv_A Otcase, ornithine carbamoyltransferase; dodecamer; 1.87A {Pyrococcus furiosus} SCOP: c.78.1.1 c.78.1.1 PDB: 1a1s_A
Probab=96.83 E-value=0.12 Score=49.33 Aligned_cols=106 Identities=15% Similarity=0.168 Sum_probs=68.9
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-...+...+...+..+..| ..+....+++|.++++|+|
T Consensus 152 ~l~gl~va~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~~~~~~d~~eav~~aDvv 227 (315)
T 1pvv_A 152 TIKGVKVVYVGDGNNVAHSLMIAG-TKLGADVVVATPEGYEPDEKVIKWAEQNAAESG---GSFELLHDPVKAVKDADVI 227 (315)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CEEEEESCHHHHTTTCSEE
T ss_pred CcCCcEEEEECCCcchHHHHHHHH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhCCCCEE
Confidence 488999999997 88999999987 579999999987542111111100000001111 1233457899999999999
Q ss_pred EEccCC-------Chh-----hhhcccHHHHhcCCCCcEEEEc
Q 016620 241 SLHPVL-------DKT-----TYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 241 vl~lPl-------t~~-----t~~li~~~~~~~mk~gailIN~ 271 (386)
..-.-. .++ ...-++.+.++.+|++++|.-+
T Consensus 228 y~~~w~smg~~~~~~~~~~~~~~y~v~~ell~~a~~~ai~mH~ 270 (315)
T 1pvv_A 228 YTDVWASMGQEAEAEERRKIFRPFQVNKDLVKHAKPDYMFMHC 270 (315)
T ss_dssp EECCCCCSSTTSSSSHHHHHHGGGCBCHHHHHTSCTTCEEEEC
T ss_pred EEcceeccCcccchHHHHHHHHhcCCCHHHHhhcCCCcEEECC
Confidence 885431 111 1245688888888988888776
No 230
>1duv_G Octase-1, ornithine transcarbamoylase; enzyme-inhibitor complex, transferase; HET: PSQ; 1.70A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1akm_A* 2otc_A*
Probab=96.81 E-value=0.12 Score=49.82 Aligned_cols=140 Identities=14% Similarity=0.094 Sum_probs=85.4
Q ss_pred hhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC--hhHHHHHHH
Q 016620 106 NKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYARM 183 (386)
Q Consensus 106 ~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G--~IG~~iA~~ 183 (386)
+-.+|+|.|.-+....++ .+|+=++.+.+++ .|..+.|.+|+++|=| +++.+.+..
T Consensus 118 ~~~~vPVINa~~~~~HPt--Q~LaDl~Ti~e~~--------------------~g~~l~gl~ia~vGD~~~~va~Sl~~~ 175 (333)
T 1duv_G 118 EYASVPVWNGLTNEFHPT--QLLADLLTMQEHL--------------------PGKAFNEMTLVYAGDARNNMGNSMLEA 175 (333)
T ss_dssp HHHSSCEEESCCSSCCHH--HHHHHHHHHHHHS--------------------TTCCGGGCEEEEESCTTSHHHHHHHHH
T ss_pred HhCCCCeEcCCCCCCCch--HHHHHHHHHHHHh--------------------cCCCCCCcEEEEECCCccchHHHHHHH
Confidence 344799999765433322 2344344443320 1224889999999986 999999998
Q ss_pred HHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCC--------hh-----h
Q 016620 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD--------KT-----T 250 (386)
Q Consensus 184 L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt--------~~-----t 250 (386)
+ ..||++|.+..|..-...+.+.+...+..+..| .......+++|.++++|+|..-.-.. .+ .
T Consensus 176 ~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDvvytd~w~smg~~~~~~~er~~~~~ 251 (333)
T 1duv_G 176 A-ALTGLDLRLVAPQACWPEAALVTECRALAQQNG---GNITLTEDVAKGVEGADFIYTDVWVSMGEAKEKWAERIALLR 251 (333)
T ss_dssp H-HHHCCEEEEECCGGGCCCHHHHHHHHHHHHHTT---CEEEEESCHHHHHTTCSEEEECCSSCTTSCTTHHHHHHHHHG
T ss_pred H-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhCCCCEEEeCCccccCccccchHHHHHHhh
Confidence 7 478999999987542111111110000011112 12334579999999999998854411 01 1
Q ss_pred hhcccHHHHhcC-CCCcEEEEc
Q 016620 251 YHLINKERLATM-KKEAILVNC 271 (386)
Q Consensus 251 ~~li~~~~~~~m-k~gailIN~ 271 (386)
..-++.+.++.+ |++++|.-+
T Consensus 252 ~y~v~~~ll~~a~~~~ai~mHc 273 (333)
T 1duv_G 252 EYQVNSKMMQLTGNPEVKFLHC 273 (333)
T ss_dssp GGCBCHHHHHTTCCTTCEEEEC
T ss_pred ccccCHHHHHhccCCCcEEECC
Confidence 245788899999 889888776
No 231
>3r7f_A Aspartate carbamoyltransferase; aspartate transcarbamoylase, carbamoyl phosphate, transferas catalytic cycle; 2.10A {Bacillus subtilis} PDB: 3r7d_A 3r7l_A* 2at2_A
Probab=96.80 E-value=0.05 Score=51.70 Aligned_cols=147 Identities=18% Similarity=0.203 Sum_probs=89.5
Q ss_pred hhccCCcEEEEccccccccChhHHhhCCcEEecCC-CCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccc
Q 016620 82 LSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTP-GVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVG 160 (386)
Q Consensus 82 l~~l~~k~i~~~~~G~d~id~~~~~~~gI~v~n~~-~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g 160 (386)
+...|...|+.+.-.-+.+. ..++-.+|+|.|.- |....++ .+++=++.+.+++ |
T Consensus 88 Ls~~~~D~iviR~~~~~~~~-~la~~~~vPVINagdg~~~HPt--QaLaDl~Ti~e~~---------------------g 143 (304)
T 3r7f_A 88 LESIGVDVCVIRHSEDEYYE-ELVSQVNIPILNAGDGCGQHPT--QSLLDLMTIYEEF---------------------N 143 (304)
T ss_dssp HHHHTCCEEEEECSSTTCHH-HHHHHCSSCEEESCCTTSCCHH--HHHHHHHHHHHHH---------------------S
T ss_pred HHHhcCCEEEEecCChhHHH-HHHHhCCCCEEeCCCCCCcCcH--HHHHHHHHHHHHh---------------------C
Confidence 33333355665544333332 23455689999985 3333222 2333333333321 1
Q ss_pred cccCCCeEEEEecC---hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 161 NLLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 161 ~~l~g~~vgIvG~G---~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
.+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-. . .....+ ...+++|+++++
T Consensus 144 -~l~glkva~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~--------------~-~~~~~g--~~~d~~eav~~a 204 (304)
T 3r7f_A 144 -TFKGLTVSIHGDIKHSRVARSNAEVL-TRLGARVLFSGPSEWQ--------------D-EENTFG--TYVSMDEAVESS 204 (304)
T ss_dssp -CCTTCEEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGS--------------C-TTCSSC--EECCHHHHHHHC
T ss_pred -CCCCCEEEEEcCCCCcchHHHHHHHH-HHcCCEEEEECCCccC--------------c-chhhcC--ccCCHHHHhCCC
Confidence 3789999999975 6999999987 5799999999874321 0 000111 246899999999
Q ss_pred CEEEEccCCChh-----------hhhcccHHHHhcCCCCcEEEEc
Q 016620 238 DVISLHPVLDKT-----------TYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 238 DiVvl~lPlt~~-----------t~~li~~~~~~~mk~gailIN~ 271 (386)
|+|..-.-..+. ...-++.+.++.+|++++|.-+
T Consensus 205 Dvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mHc 249 (304)
T 3r7f_A 205 DVVMLLRIQNERHQSAVSQEGYLNKYGLTVERAERMKRHAIIMHP 249 (304)
T ss_dssp SEEEECCCCTTTCCSSCCSTTHHHHHSBCHHHHTTSCTTCEEECC
T ss_pred CEEEeccchhhccccchhHHHHhCCCccCHHHHhhcCCCCEEECC
Confidence 999885321111 1234688888888888888765
No 232
>2i6u_A Otcase, ornithine carbamoyltransferase; X-RAY crystallography, ornithine carbamyoltransferase, carbamoyl phosphate, L- norvaline; 2.20A {Mycobacterium tuberculosis} PDB: 2p2g_A
Probab=96.80 E-value=0.081 Score=50.36 Aligned_cols=139 Identities=15% Similarity=0.082 Sum_probs=84.6
Q ss_pred HhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC--hhHHHHHH
Q 016620 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (386)
Q Consensus 105 ~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G--~IG~~iA~ 182 (386)
++-.+|+|.|.-+....++ .+++=++.+.+++ | .+.|.+|+++|=| ++..+.+.
T Consensus 112 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g-------------~l~gl~va~vGD~~~rva~Sl~~ 167 (307)
T 2i6u_A 112 ASVATVPVINALSDEFHPC--QVLADLQTIAERK---------G-------------ALRGLRLSYFGDGANNMAHSLLL 167 (307)
T ss_dssp HHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH---------S-------------CCTTCEEEEESCTTSHHHHHHHH
T ss_pred HhhCCCCEEcCCCCCcCcc--HHHHHHHHHHHHh---------C-------------CcCCeEEEEECCCCcCcHHHHHH
Confidence 3445799999766443322 2344344443321 1 4889999999986 99999999
Q ss_pred HHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCC-------hh-----h
Q 016620 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD-------KT-----T 250 (386)
Q Consensus 183 ~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt-------~~-----t 250 (386)
.+ ..||++|.+..|..-...+.+.+...+..+..| ..+....+++|.++++|+|..-.-.. ++ .
T Consensus 168 ~~-~~~g~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~~~~~~d~~eav~~aDvvy~~~w~smg~~~~~~~~~~~~~ 243 (307)
T 2i6u_A 168 GG-VTAGIHVTVAAPEGFLPDPSVRAAAERRAQDTG---ASVTVTADAHAAAAGADVLVTDTWTSMGQENDGLDRVKPFR 243 (307)
T ss_dssp HH-HHTTCEEEEECCTTSCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEEEECCSSCTTCTTSCCCSSGGGG
T ss_pred HH-HHCCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhcCCCEEEecceecCCcccchHHHHHHHh
Confidence 87 579999999987542111111110000001112 12334579999999999998854310 00 1
Q ss_pred hhcccHHHHhcCCCCcEEEEc
Q 016620 251 YHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 251 ~~li~~~~~~~mk~gailIN~ 271 (386)
..-++.+.++.+|++++|.-+
T Consensus 244 ~y~v~~~~l~~a~~~ai~mH~ 264 (307)
T 2i6u_A 244 PFQLNSRLLALADSDAIVLHC 264 (307)
T ss_dssp GGCBCHHHHHHSCTTCEEEEC
T ss_pred hcCCCHHHHhhcCCCcEEECC
Confidence 244678888888888888766
No 233
>1j5p_A Aspartate dehydrogenase; TM1643, structural genomics, JCSG, protein structure initiative, joint center for structural G oxidoreductase; HET: NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3 PDB: 1h2h_A*
Probab=96.79 E-value=0.0027 Score=58.89 Aligned_cols=99 Identities=19% Similarity=0.219 Sum_probs=68.5
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
-..++|+++|+|.||+.+++. . ++++ .+|+ .. . +.. +.....+++++++++|+|+
T Consensus 10 ~~~~rV~i~G~GaIG~~v~~~---~-~leLv~v~~-~k-~----------------gel--gv~a~~d~d~lla~pD~VV 65 (253)
T 1j5p_A 10 HHHMTVLIIGMGNIGKKLVEL---G-NFEKIYAYD-RI-S----------------KDI--PGVVRLDEFQVPSDVSTVV 65 (253)
T ss_dssp -CCCEEEEECCSHHHHHHHHH---S-CCSEEEEEC-SS-C----------------CCC--SSSEECSSCCCCTTCCEEE
T ss_pred cccceEEEECcCHHHHHHHhc---C-CcEEEEEEe-cc-c----------------ccc--CceeeCCHHHHhhCCCEEE
Confidence 356799999999999999986 3 6654 4566 11 1 111 2223467888888999999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCH---HHHHHHHHcCC
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDE---VALVEHLKQNP 290 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde---~aL~~aL~~g~ 290 (386)
=|.+. + -+.+.....++.|.=+|-+|-|.+.|. +.|.++.++|.
T Consensus 66 e~A~~--~---av~e~~~~iL~aG~dvv~~S~gaLad~~l~~~L~~aA~~gg 112 (253)
T 1j5p_A 66 ECASP--E---AVKEYSLQILKNPVNYIIISTSAFADEVFRERFFSELKNSP 112 (253)
T ss_dssp ECSCH--H---HHHHHHHHHTTSSSEEEECCGGGGGSHHHHHHHHHHHHTCS
T ss_pred ECCCH--H---HHHHHHHHHHHCCCCEEEcChhhhcCHHHHHHHHHHHHHCC
Confidence 88852 1 233335566889999999999988887 55666666653
No 234
>3m2t_A Probable dehydrogenase; PSI, SGXNY, structural genomics, protein structure initiative; HET: NAD; 2.30A {Chromobacterium violaceum}
Probab=96.79 E-value=0.0024 Score=62.05 Aligned_cols=69 Identities=10% Similarity=0.133 Sum_probs=47.6
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC--CEEE
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA--DVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a--DiVv 241 (386)
.+|||||+|.||+. .++.+.+.-++++. ++|++.... +.+. +..+ ....+.++++++++. |+|+
T Consensus 6 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a-------~~~~----~~~~~~~~~~ll~~~~vD~V~ 73 (359)
T 3m2t_A 6 IKVGLVGIGAQMQENLLPSLLQMQDIRIVAACDSDLERA-RRVH-------RFIS----DIPVLDNVPAMLNQVPLDAVV 73 (359)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTCTTEEEEEEECSSHHHH-GGGG-------GTSC----SCCEESSHHHHHHHSCCSEEE
T ss_pred ceEEEECCCHHHHHHHHHHHHhCCCcEEEEEEcCCHHHH-HHHH-------HhcC----CCcccCCHHHHhcCCCCCEEE
Confidence 57999999999995 88887433378876 778876542 1111 1111 122357999999865 9999
Q ss_pred EccCC
Q 016620 242 LHPVL 246 (386)
Q Consensus 242 l~lPl 246 (386)
+|+|.
T Consensus 74 i~tp~ 78 (359)
T 3m2t_A 74 MAGPP 78 (359)
T ss_dssp ECSCH
T ss_pred EcCCc
Confidence 99994
No 235
>3fef_A Putative glucosidase LPLD; gulosidase, structural genomics, unknown function, glycosidase, hydrolase, manganese, metal-binding, NAD, PSI- 2; 2.20A {Bacillus subtilis}
Probab=96.77 E-value=0.0038 Score=62.71 Aligned_cols=77 Identities=16% Similarity=0.210 Sum_probs=51.0
Q ss_pred CCCeEEEEecChh--HHHHHHHHHh--c-CCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 164 KGQTVGVIGAGRI--GSAYARMMVE--G-FKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 164 ~g~~vgIvG~G~I--G~~iA~~L~~--~-fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
..++|+|||.|++ |..++..|++ . .| +|..||...... +.. ......+.. .+.......+++++++.||
T Consensus 4 ~~~KIaVIGaGs~g~g~~la~~l~~~~~~~g-eV~L~Di~~e~l-e~~-~~~~~~l~~---~~~~I~~TtD~~eAl~dAD 77 (450)
T 3fef_A 4 DQIKIAYIGGGSQGWARSLMSDLSIDERMSG-TVALYDLDFEAA-QKN-EVIGNHSGN---GRWRYEAVSTLKKALSAAD 77 (450)
T ss_dssp CCEEEEEETTTCSSHHHHHHHHHHHCSSCCE-EEEEECSSHHHH-HHH-HHHHTTSTT---SCEEEEEESSHHHHHTTCS
T ss_pred CCCEEEEECCChhHhHHHHHHHHHhccccCC-eEEEEeCCHHHH-HHH-HHHHHHHhc---cCCeEEEECCHHHHhcCCC
Confidence 4568999999998 5788877653 2 35 999999986432 111 111111111 2333445579999999999
Q ss_pred EEEEccCC
Q 016620 239 VISLHPVL 246 (386)
Q Consensus 239 iVvl~lPl 246 (386)
+|+++++.
T Consensus 78 fVI~airv 85 (450)
T 3fef_A 78 IVIISILP 85 (450)
T ss_dssp EEEECCCS
T ss_pred EEEecccc
Confidence 99999964
No 236
>3ec7_A Putative dehydrogenase; alpha-beta, structural genomics, PSI-2, protein structure in midwest center for structural genomics, MCSG; HET: MSE NAD EPE; 2.15A {Salmonella typhimurium}
Probab=96.74 E-value=0.0059 Score=59.23 Aligned_cols=72 Identities=15% Similarity=0.299 Sum_probs=50.1
Q ss_pred CCeEEEEecChhHHHHHHHHH-hcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~-~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (386)
-.+|||||+|.||+..++.++ +.-++++. ++|++.... +.+.+.| +. ....+.+++++++ +.|+|
T Consensus 23 ~~rvgiIG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~~-------g~---~~~~~~~~~~ll~~~~~D~V 91 (357)
T 3ec7_A 23 TLKAGIVGIGMIGSDHLRRLANTVSGVEVVAVCDIVAGRA-QAALDKY-------AI---EAKDYNDYHDLINDKDVEVV 91 (357)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTCTTEEEEEEECSSTTHH-HHHHHHH-------TC---CCEEESSHHHHHHCTTCCEE
T ss_pred eeeEEEECCcHHHHHHHHHHHhhCCCcEEEEEEeCCHHHH-HHHHHHh-------CC---CCeeeCCHHHHhcCCCCCEE
Confidence 357999999999999999875 33478866 688876542 2222211 11 1224579999997 48999
Q ss_pred EEccCCC
Q 016620 241 SLHPVLD 247 (386)
Q Consensus 241 vl~lPlt 247 (386)
++|+|..
T Consensus 92 ~i~tp~~ 98 (357)
T 3ec7_A 92 IITASNE 98 (357)
T ss_dssp EECSCGG
T ss_pred EEcCCcH
Confidence 9999953
No 237
>3ohs_X Trans-1,2-dihydrobenzene-1,2-DIOL dehydrogenase; dimeric dihydrodiol dehydrogenase, MDD, oxidoreductase; 1.90A {Macaca fascicularis} PDB: 2o48_X 2poq_X* 2o4u_X
Probab=96.73 E-value=0.01 Score=56.75 Aligned_cols=69 Identities=13% Similarity=0.217 Sum_probs=47.3
Q ss_pred CeEEEEecChhHHHHHHHHHhcC---CcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGF---KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~f---g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (386)
.++||||+|.||+..++.+ +.. ++++. ++|++.... +.+.+.| +.. ..+.+++++++ +.|+
T Consensus 3 ~rigiiG~G~ig~~~~~~l-~~~~~~~~~l~av~d~~~~~a-~~~a~~~-------~~~----~~~~~~~~ll~~~~vD~ 69 (334)
T 3ohs_X 3 LRWGIVSVGLISSDFTAVL-QTLPRSEHQVVAVAARDLSRA-KEFAQKH-------DIP----KAYGSYEELAKDPNVEV 69 (334)
T ss_dssp EEEEEECCSHHHHHHHHHH-TTSCTTTEEEEEEECSSHHHH-HHHHHHH-------TCS----CEESSHHHHHHCTTCCE
T ss_pred cEEEEECchHHHHHHHHHH-HhCCCCCeEEEEEEcCCHHHH-HHHHHHc-------CCC----cccCCHHHHhcCCCCCE
Confidence 3799999999999999987 443 34644 678876542 2222221 111 13579999997 6999
Q ss_pred EEEccCCC
Q 016620 240 ISLHPVLD 247 (386)
Q Consensus 240 Vvl~lPlt 247 (386)
|++++|..
T Consensus 70 V~i~tp~~ 77 (334)
T 3ohs_X 70 AYVGTQHP 77 (334)
T ss_dssp EEECCCGG
T ss_pred EEECCCcH
Confidence 99999953
No 238
>2ef0_A Ornithine carbamoyltransferase; TTHA1199, thermus thermophil structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=96.72 E-value=0.15 Score=48.28 Aligned_cols=104 Identities=12% Similarity=0.059 Sum_probs=71.3
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-...+...+ ... .....+++|.++++|+|
T Consensus 151 ~l~gl~ia~vGD~~rva~Sl~~~~-~~~g~~v~~~~P~~~~~~~~~~~-------~~~-----~~~~~d~~eav~~aDvv 217 (301)
T 2ef0_A 151 GLAGLEVAWVGDGNNVLNSLLEVA-PLAGLKVRVATPKGYEPDPGLLK-------RAN-----AFFTHDPKEAALGAHAL 217 (301)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHH-------HHT-----CEEESCHHHHHTTCSEE
T ss_pred CcCCcEEEEECCCchhHHHHHHHH-HHcCCEEEEECCchhcCCHHHHh-------hce-----eEEECCHHHHhcCCCEE
Confidence 388999999997 88999999887 57899999998754211111110 000 22357899999999999
Q ss_pred EEccCCC------hh------hhhcccHHHHhcCCCCcEEEEcC---CCcccC
Q 016620 241 SLHPVLD------KT------TYHLINKERLATMKKEAILVNCS---RGPVID 278 (386)
Q Consensus 241 vl~lPlt------~~------t~~li~~~~~~~mk~gailIN~a---Rg~~vd 278 (386)
..-.-.. .. ...-++.+.++++|++++|.-+. ||.=|+
T Consensus 218 y~~~~~smg~~~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mHplP~~Rg~EI~ 270 (301)
T 2ef0_A 218 YTDVWTSMGQEAEREKRLRDFQGFQVNGELLKLLRPEGVFLHCLPAHYGEETT 270 (301)
T ss_dssp EECCCC--------CHHHHHTTTCCBCHHHHTTSCTTCEEEECSCCCBTTTBC
T ss_pred EecCcccCCcccchhHHHHHhhccccCHHHHHhcCCCcEEECCCCCCCCCccC
Confidence 8844311 01 12456889999999999998875 555444
No 239
>3ego_A Probable 2-dehydropantoate 2-reductase; structural genomics, PANE, unknown function, cytoplasm, NADP, oxidoreductase; 1.90A {Bacillus subtilis}
Probab=96.70 E-value=0.0011 Score=63.04 Aligned_cols=99 Identities=16% Similarity=0.251 Sum_probs=57.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCH-HHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell~~aDiVvl~l 244 (386)
++|+|||.|.||..+|..| . -|.+|.+++|+.... +...+ .+-.....+.. .....+. ++....+|+|++++
T Consensus 3 mkI~IiGaGa~G~~~a~~L-~-~g~~V~~~~r~~~~~-~~l~~-~G~~~~~~~~~---~~~~~~~~~~~~~~~D~vilav 75 (307)
T 3ego_A 3 LKIGIIGGGSVGLLCAYYL-S-LYHDVTVVTRRQEQA-AAIQS-EGIRLYKGGEE---FRADCSADTSINSDFDLLVVTV 75 (307)
T ss_dssp CEEEEECCSHHHHHHHHHH-H-TTSEEEEECSCHHHH-HHHHH-HCEEEEETTEE---EEECCEEESSCCSCCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHH-h-cCCceEEEECCHHHH-HHHHh-CCceEecCCCe---ecccccccccccCCCCEEEEEe
Confidence 6899999999999999998 4 689999999976421 11100 00000000000 0000000 23467899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+.. ++...+ +.++.+.+++ +|.+.-|=
T Consensus 76 K~~-~~~~~l--~~l~~~~~~~-ivs~~nGi 102 (307)
T 3ego_A 76 KQH-QLQSVF--SSLERIGKTN-ILFLQNGM 102 (307)
T ss_dssp CGG-GHHHHH--HHTTSSCCCE-EEECCSSS
T ss_pred CHH-HHHHHH--HHhhcCCCCe-EEEecCCc
Confidence 853 333333 2334445666 77776653
No 240
>1f06_A MESO-diaminopimelate D-dehydrogenase; enzyme-NADPH-inhibitor ternary complex, oxidoreductase; HET: NDP 2NP; 2.10A {Corynebacterium glutamicum} SCOP: c.2.1.3 d.81.1.3 PDB: 1dap_A* 2dap_A* 3dap_A*
Probab=96.69 E-value=0.0028 Score=60.77 Aligned_cols=103 Identities=14% Similarity=0.149 Sum_probs=63.1
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
.+|||+|+|.||+.+++.+.+.-++++ .++|++.... + . .+...+.++++++.++|+|++|+
T Consensus 4 irV~IiG~G~mG~~~~~~l~~~~~~elvav~d~~~~~~-----------~---~---~gv~~~~d~~~ll~~~DvViiat 66 (320)
T 1f06_A 4 IRVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATLD-----------T---K---TPVFDVADVDKHADDVDVLFLCM 66 (320)
T ss_dssp EEEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCCS-----------S---S---SCEEEGGGGGGTTTTCSEEEECS
T ss_pred CEEEEEeecHHHHHHHHHHhcCCCCEEEEEEcCCHHHh-----------h---c---CCCceeCCHHHHhcCCCEEEEcC
Confidence 379999999999999998743336775 4778764320 0 0 11222456778778899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCCc--ccCH-HHHHHHHHcCC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRGP--VIDE-VALVEHLKQNP 290 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg~--~vde-~aL~~aL~~g~ 290 (386)
|..... +.....++.|.-++...-.. +-+. +.|.++.+++.
T Consensus 67 p~~~h~-----~~~~~al~aG~~Vv~ekp~~~~~~~~~~~l~~~a~~~~ 110 (320)
T 1f06_A 67 GSATDI-----PEQAPKFAQFACTVDTYDNHRDIPRHRQVMNEAATAAG 110 (320)
T ss_dssp CTTTHH-----HHHHHHHTTTSEEECCCCCGGGHHHHHHHHHHHHHHHT
T ss_pred CcHHHH-----HHHHHHHHCCCEEEECCCCcCCHHHHHHHHHHHHHhCC
Confidence 853221 22334456676555543332 2222 45666666543
No 241
>1obb_A Maltase, alpha-glucosidase; glycosidase, sulfinic acid, NAD+, maltose, hydrolase; HET: MAL NAD; 1.90A {Thermotoga maritima} SCOP: c.2.1.5 d.162.1.2
Probab=96.68 E-value=0.0042 Score=62.90 Aligned_cols=128 Identities=11% Similarity=0.225 Sum_probs=74.7
Q ss_pred CCeEEEEecChh--HHHHHHHHHh--cC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 165 GQTVGVIGAGRI--GSAYARMMVE--GF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 165 g~~vgIvG~G~I--G~~iA~~L~~--~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.++|+|||.|.+ |.++|..|++ ++ |.+|..||+..... +...+.....+.. ...+.......++++.++.||+
T Consensus 3 ~~KIaVIGAGsVg~g~ala~~La~~~~l~~~eV~L~Di~~e~l-~~~~~~~~~~l~~-~~~~~~I~~ttD~~eal~dAD~ 80 (480)
T 1obb_A 3 SVKIGIIGAGSAVFSLRLVSDLCKTPGLSGSTVTLMDIDEERL-DAILTIAKKYVEE-VGADLKFEKTMNLDDVIIDADF 80 (480)
T ss_dssp CCEEEEETTTCHHHHHHHHHHHHTCGGGTTCEEEEECSCHHHH-HHHHHHHHHHHHH-TTCCCEEEEESCHHHHHTTCSE
T ss_pred CCEEEEECCCchHHHHHHHHHHHhcCcCCCCEEEEEeCCHHHH-HHHHHHHHHHhcc-CCCCcEEEEECCHHHHhCCCCE
Confidence 468999999997 4656666642 44 78999999987532 1111110011111 1123334445688888999999
Q ss_pred EEEccCCCh-----------hhhhccc-------------------------H---HHHhcCCCCcEEEEcCCCcccCHH
Q 016620 240 ISLHPVLDK-----------TTYHLIN-------------------------K---ERLATMKKEAILVNCSRGPVIDEV 280 (386)
Q Consensus 240 Vvl~lPlt~-----------~t~~li~-------------------------~---~~~~~mk~gailIN~aRg~~vde~ 280 (386)
|+++.|... .-.+++. . +.+....|.+++||++-.-=+-..
T Consensus 81 VIiaagv~~~~~~~~dE~ip~K~g~~~~l~dt~g~g~~~~G~~~~~rni~i~~~i~~~i~~~~P~A~ii~~TNPvdi~t~ 160 (480)
T 1obb_A 81 VINTAMVGGHTYLEKVRQIGEKYGYYRGIDAQEFNMVSDYYTFSNYNQLKYFVDIARKIEKLSPKAWYLQAANPIFEGTT 160 (480)
T ss_dssp EEECCCTTHHHHHHHHHHHHHHTTCTTCTTCBTTBCCTTCCSSSCHHHHHHHHHHHHHHHHHCTTCEEEECSSCHHHHHH
T ss_pred EEECCCcccccccccccccccccccccchhhhcCCccchhhhHHhhhhHHHHHHHHHHHHHHCCCeEEEEeCCcHHHHHH
Confidence 999997410 0011100 1 223334689999999875544455
Q ss_pred HHHHHHHcCCcceEE
Q 016620 281 ALVEHLKQNPMFRVG 295 (386)
Q Consensus 281 aL~~aL~~g~i~gaa 295 (386)
++.+ +...++.|.+
T Consensus 161 ~~~k-~p~~rviG~c 174 (480)
T 1obb_A 161 LVTR-TVPIKAVGFC 174 (480)
T ss_dssp HHHH-HSCSEEEEEC
T ss_pred HHHH-CCCCcEEecC
Confidence 5544 4455566653
No 242
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=96.67 E-value=0.0027 Score=63.23 Aligned_cols=96 Identities=19% Similarity=0.208 Sum_probs=61.6
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHH-hhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (386)
+.+|.|+|+|.+|+.+|+.| +..|.+|++.|.++..... ++..+.. .......+ |+++ +.+||+|
T Consensus 4 ~~~viIiG~Gr~G~~va~~L-~~~g~~vvvId~d~~~v~~---------~~~~g~~-vi~GDat~~~~L~~agi~~A~~v 72 (413)
T 3l9w_A 4 GMRVIIAGFGRFGQITGRLL-LSSGVKMVVLDHDPDHIET---------LRKFGMK-VFYGDATRMDLLESAGAAKAEVL 72 (413)
T ss_dssp CCSEEEECCSHHHHHHHHHH-HHTTCCEEEEECCHHHHHH---------HHHTTCC-CEESCTTCHHHHHHTTTTTCSEE
T ss_pred CCeEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHHHH---------HHhCCCe-EEEcCCCCHHHHHhcCCCccCEE
Confidence 45799999999999999998 6889999999998764221 1222221 11112223 3333 6789999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+++++.... .+.-....+.+.+...+|--++
T Consensus 73 iv~~~~~~~--n~~i~~~ar~~~p~~~Iiara~ 103 (413)
T 3l9w_A 73 INAIDDPQT--NLQLTEMVKEHFPHLQIIARAR 103 (413)
T ss_dssp EECCSSHHH--HHHHHHHHHHHCTTCEEEEEES
T ss_pred EECCCChHH--HHHHHHHHHHhCCCCeEEEEEC
Confidence 999996433 3333455666667755554433
No 243
>3kux_A Putative oxidoreductase; oxidoreductase family, csgid, structural genomics, center FO structural genomics of infectious diseases; HET: MSE; 2.75A {Yersinia pestis}
Probab=96.66 E-value=0.0048 Score=59.59 Aligned_cols=68 Identities=15% Similarity=0.125 Sum_probs=47.7
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEEE
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiVv 241 (386)
.+|||||+|.||+. .++.+.+.-++++. ++|++...... .. .....+.+++++++. .|+|+
T Consensus 8 ~rvgiiG~G~~g~~~~~~~~~~~~~~~l~av~d~~~~~~~~-------------~~--~~~~~~~~~~~ll~~~~vD~V~ 72 (352)
T 3kux_A 8 IKVGLLGYGYASKTFHAPLIMGTPGLELAGVSSSDASKVHA-------------DW--PAIPVVSDPQMLFNDPSIDLIV 72 (352)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTSTTEEEEEEECSCHHHHHT-------------TC--SSCCEESCHHHHHHCSSCCEEE
T ss_pred ceEEEECCCHHHHHHHHHHHhhCCCcEEEEEECCCHHHHHh-------------hC--CCCceECCHHHHhcCCCCCEEE
Confidence 47999999999997 77776433378865 67887654210 01 112345799999986 89999
Q ss_pred EccCCCh
Q 016620 242 LHPVLDK 248 (386)
Q Consensus 242 l~lPlt~ 248 (386)
+|+|...
T Consensus 73 i~tp~~~ 79 (352)
T 3kux_A 73 IPTPNDT 79 (352)
T ss_dssp ECSCTTT
T ss_pred EeCChHH
Confidence 9999643
No 244
>3vku_A L-LDH, L-lactate dehydrogenase; rossmann fold, NADH binding, oxidoreductase; 1.96A {Lactobacillus casei} PDB: 2zqz_A 2zqy_A 3vkv_A* 1llc_A*
Probab=96.65 E-value=0.0052 Score=59.20 Aligned_cols=110 Identities=20% Similarity=0.264 Sum_probs=61.0
Q ss_pred cCCCeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
-.+++|+|+|.|.||.++|..|+. ++.-++..+|.........-.+.-+. ... ...... ..+..+.+++||+|+
T Consensus 7 ~~~~kV~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~--~~~-~~~~~i--~~~~~~a~~~aDiVv 81 (326)
T 3vku_A 7 KDHQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLEDA--LPF-TSPKKI--YSAEYSDAKDADLVV 81 (326)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT--GGG-SCCCEE--EECCGGGGTTCSEEE
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhCCCCCeEEEEeCChHHHHHHHhhHhhh--hhh-cCCcEE--EECcHHHhcCCCEEE
Confidence 356789999999999999988743 23238999998754321111111000 000 011111 233456789999999
Q ss_pred EccCCCh---hhh-hcc--c----H---HHHhcCCCCcEEEEcCCCcccCH
Q 016620 242 LHPVLDK---TTY-HLI--N----K---ERLATMKKEAILVNCSRGPVIDE 279 (386)
Q Consensus 242 l~lPlt~---~t~-~li--~----~---~~~~~mk~gailIN~aRg~~vde 279 (386)
++..... .++ .++ | . +.+....|.+++++++- .+|.
T Consensus 82 i~ag~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~ilvvtN--Pvdi 130 (326)
T 3vku_A 82 ITAGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAAN--PVDI 130 (326)
T ss_dssp ECCCCC----------------CHHHHHHHHHTTTCCSEEEECSS--SHHH
T ss_pred ECCCCCCCCCchHHHHHHHHHHHHHHHHHHHHhcCCceEEEEccC--chHH
Confidence 9865321 122 122 1 1 23444567899999964 4443
No 245
>3f4l_A Putative oxidoreductase YHHX; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Escherichia coli k-12}
Probab=96.64 E-value=0.0026 Score=61.34 Aligned_cols=69 Identities=14% Similarity=0.159 Sum_probs=45.9
Q ss_pred CeEEEEecChhHHH-HHH-HHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEE
Q 016620 166 QTVGVIGAGRIGSA-YAR-MMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~-~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (386)
.+|||||+|.||+. .+. .+.+.-++++. ++|++.... . .. ... .+...+.+++++++. .|+|
T Consensus 3 ~rvgiiG~G~~g~~~~~~~~~~~~~~~~l~av~d~~~~~~-~-~~-------~~~----~~~~~~~~~~~ll~~~~~D~V 69 (345)
T 3f4l_A 3 INCAFIGFGKSTTRYHLPYVLNRKDSWHVAHIFRRHAKPE-E-QA-------PIY----SHIHFTSDLDEVLNDPDVKLV 69 (345)
T ss_dssp EEEEEECCSHHHHHHTHHHHTTCTTTEEEEEEECSSCCGG-G-GS-------GGG----TTCEEESCTHHHHTCTTEEEE
T ss_pred eEEEEEecCHHHHHHHHHHHHhcCCCeEEEEEEcCCHhHH-H-HH-------Hhc----CCCceECCHHHHhcCCCCCEE
Confidence 37999999999996 455 33234478877 788876432 1 00 000 012245799999986 8999
Q ss_pred EEccCCC
Q 016620 241 SLHPVLD 247 (386)
Q Consensus 241 vl~lPlt 247 (386)
++|+|..
T Consensus 70 ~i~tp~~ 76 (345)
T 3f4l_A 70 VVCTHAD 76 (345)
T ss_dssp EECSCGG
T ss_pred EEcCChH
Confidence 9999953
No 246
>1dxh_A Ornithine carbamoyltransferase; transcarbamylase; 2.50A {Pseudomonas aeruginosa} SCOP: c.78.1.1 c.78.1.1 PDB: 1ort_A
Probab=96.64 E-value=0.1 Score=50.23 Aligned_cols=106 Identities=13% Similarity=0.198 Sum_probs=69.9
Q ss_pred ccCCCeEEEEecC--hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 162 LLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 162 ~l~g~~vgIvG~G--~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.+.|.+|+++|=| +++.+.+..+ ..||++|.+..|..-...+.+.+...+..+..| ..+....+++|.++++|+
T Consensus 152 ~l~gl~va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDv 227 (335)
T 1dxh_A 152 PLHDISYAYLGDARNNMGNSLLLIG-AKLGMDVRIAAPKALWPHDEFVAQCKKFAEESG---AKLTLTEDPKEAVKGVDF 227 (335)
T ss_dssp CGGGCEEEEESCCSSHHHHHHHHHH-HHTTCEEEEECCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHTTTCSE
T ss_pred CcCCeEEEEecCCccchHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhCCCCE
Confidence 5899999999986 9999999987 579999999987543211111110000001112 123345799999999999
Q ss_pred EEEccCCC--------hh-----hhhcccHHHHhcC-CCCcEEEEc
Q 016620 240 ISLHPVLD--------KT-----TYHLINKERLATM-KKEAILVNC 271 (386)
Q Consensus 240 Vvl~lPlt--------~~-----t~~li~~~~~~~m-k~gailIN~ 271 (386)
|..-.-.. .+ ...-++.+.++++ |++++|.-+
T Consensus 228 vytd~w~smg~~~e~~~er~~~~~~y~v~~~ll~~a~~~~ai~mHc 273 (335)
T 1dxh_A 228 VHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHC 273 (335)
T ss_dssp EEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEEC
T ss_pred EEeCCccccCccchhhHHHHHHhhcceeCHHHHHhccCCCeEEECC
Confidence 98854411 11 1245788899999 889888776
No 247
>1h6d_A Precursor form of glucose-fructose oxidoreductase; protein translocation, periplasmic oxidoreductase, signal peptide, ligand binding,; HET: NDP; 2.05A {Zymomonas mobilis} SCOP: c.2.1.3 d.81.1.5 PDB: 1h6b_A* 1h6a_A* 1h6c_A* 1ryd_A* 1rye_A* 1ofg_A* 1evj_A*
Probab=96.62 E-value=0.0051 Score=61.39 Aligned_cols=113 Identities=11% Similarity=0.105 Sum_probs=64.1
Q ss_pred CeEEEEecChhHH-HHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEE
Q 016620 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~-~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVv 241 (386)
.+|||||+|.||+ .+++.+.+.-++++ .++|++.... +.+.+.| +........+.++++++. +.|+|+
T Consensus 84 irigiIG~G~~g~~~~~~~l~~~~~~~lvav~d~~~~~~-~~~a~~~-------g~~~~~~~~~~~~~~ll~~~~vD~V~ 155 (433)
T 1h6d_A 84 FGYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKA-KIVAAEY-------GVDPRKIYDYSNFDKIAKDPKIDAVY 155 (433)
T ss_dssp EEEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHH-HHHHHHT-------TCCGGGEECSSSGGGGGGCTTCCEEE
T ss_pred eEEEEECCcHHHHHHHHHHHhhCCCcEEEEEEcCCHHHH-HHHHHHh-------CCCcccccccCCHHHHhcCCCCCEEE
Confidence 4799999999997 88888743236775 5788876542 2222211 211101123568899987 799999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~i 291 (386)
+|+|... .. +-....++.|. +++.- ---.+-+.+.|.++.++..+
T Consensus 156 iatp~~~--h~---~~~~~al~aGk~Vl~EKPla~~~~e~~~l~~~a~~~g~ 202 (433)
T 1h6d_A 156 IILPNSL--HA---EFAIRAFKAGKHVMCEKPMATSVADCQRMIDAAKAANK 202 (433)
T ss_dssp ECSCGGG--HH---HHHHHHHHTTCEEEECSSCCSSHHHHHHHHHHHHHHTC
T ss_pred EcCCchh--HH---HHHHHHHHCCCcEEEcCCCCCCHHHHHHHHHHHHHhCC
Confidence 9999532 21 12222344454 55542 11223344566666665433
No 248
>1lld_A L-lactate dehydrogenase; oxidoreductase(CHOH (D)-NAD (A)); HET: NAD; 2.00A {Bifidobacterium longum subsp} SCOP: c.2.1.5 d.162.1.1 PDB: 1lth_T*
Probab=96.61 E-value=0.013 Score=55.63 Aligned_cols=107 Identities=17% Similarity=0.216 Sum_probs=58.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
..++|+|||.|.||..+|..|+ ..|. +|..+|++.........+.... ..-.+ ........+. +.++.||+|+
T Consensus 6 ~~mkI~IiGaG~vG~~~a~~l~-~~g~~~~V~l~d~~~~~~~~~~~~~~~~-~~~~~--~~~v~~~~~~-~~~~~aD~Vi 80 (319)
T 1lld_A 6 KPTKLAVIGAGAVGSTLAFAAA-QRGIAREIVLEDIAKERVEAEVLDMQHG-SSFYP--TVSIDGSDDP-EICRDADMVV 80 (319)
T ss_dssp -CCEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSSHHHHHHHHHHHHHT-GGGST--TCEEEEESCG-GGGTTCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChhHHHHHHHHHHhh-hhhcC--CeEEEeCCCH-HHhCCCCEEE
Confidence 3468999999999999999884 5577 9999999763321000110000 00000 1111111243 4678999999
Q ss_pred EccCCChh---hh--------hccc--HHHHhcCCCCcEEEEcCCCc
Q 016620 242 LHPVLDKT---TY--------HLIN--KERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 242 l~lPlt~~---t~--------~li~--~~~~~~mk~gailIN~aRg~ 275 (386)
++++.... ++ .++. .+.+....+++++++++-|-
T Consensus 81 i~v~~~~~~g~~r~~~~~~n~~~~~~~~~~i~~~~~~~~vi~~~Np~ 127 (319)
T 1lld_A 81 ITAGPRQKPGQSRLELVGATVNILKAIMPNLVKVAPNAIYMLITNPV 127 (319)
T ss_dssp ECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECCSSH
T ss_pred ECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCceEEEecCch
Confidence 99953211 10 1110 11122235788898886654
No 249
>3q2o_A Phosphoribosylaminoimidazole carboxylase, ATPase; carboxylates, ATP binding, lyase; 1.96A {Bacillus anthracis} PDB: 3qff_A* 3r5h_A*
Probab=96.56 E-value=0.0045 Score=60.62 Aligned_cols=39 Identities=26% Similarity=0.490 Sum_probs=34.9
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
..+.|++|+|+|.|.+|+.+++.+ +.+|++|+++|++..
T Consensus 10 ~~~~~k~IlIlG~G~~g~~la~aa-~~~G~~vi~~d~~~~ 48 (389)
T 3q2o_A 10 IILPGKTIGIIGGGQLGRMMALAA-KEMGYKIAVLDPTKN 48 (389)
T ss_dssp CCCTTSEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSTT
T ss_pred cCCCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCCC
Confidence 347999999999999999999996 799999999998654
No 250
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=96.56 E-value=0.0066 Score=54.93 Aligned_cols=93 Identities=12% Similarity=0.178 Sum_probs=57.3
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHH-hhhCCE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADV 239 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDi 239 (386)
..+++.|+|+|.+|+.+|+.| ...|. |+++|+++..... +. .+. ........+ |+++ +.++|.
T Consensus 8 ~~~~viI~G~G~~G~~la~~L-~~~g~-v~vid~~~~~~~~---------~~-~~~-~~i~gd~~~~~~l~~a~i~~ad~ 74 (234)
T 2aef_A 8 KSRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRKKV---------LR-SGA-NFVHGDPTRVSDLEKANVRGARA 74 (234)
T ss_dssp --CEEEEESCCHHHHHHHHHS-TTSEE-EEEESCGGGHHHH---------HH-TTC-EEEESCTTCHHHHHHTTCTTCSE
T ss_pred CCCEEEEECCChHHHHHHHHH-HhCCe-EEEEECCHHHHHH---------Hh-cCC-eEEEcCCCCHHHHHhcCcchhcE
Confidence 346799999999999999997 67888 9999987654211 11 111 010111222 3333 678999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCc-EEEEc
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEA-ILVNC 271 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~ga-ilIN~ 271 (386)
|++++|.+. .++.-....+.+.++. +++.+
T Consensus 75 vi~~~~~d~--~n~~~~~~a~~~~~~~~iia~~ 105 (234)
T 2aef_A 75 VIVDLESDS--ETIHCILGIRKIDESVRIIAEA 105 (234)
T ss_dssp EEECCSCHH--HHHHHHHHHHHHCSSSEEEEEC
T ss_pred EEEcCCCcH--HHHHHHHHHHHHCCCCeEEEEE
Confidence 999998643 3344455566677774 44444
No 251
>3nep_X Malate dehydrogenase; halophIle, molecular adpatation, NAD, oxidoreductase, tricarboxylic acid cycle; 1.55A {Salinibacter ruber}
Probab=96.55 E-value=0.0078 Score=57.65 Aligned_cols=105 Identities=16% Similarity=0.231 Sum_probs=58.7
Q ss_pred CeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|+|.|.||.++|..|+. ++.-+|..+|...........+.-+... ... ...... ..+..+.+++||+|+++.
T Consensus 1 Mkv~ViGaG~vG~~~a~~l~~~~~~~el~l~D~~~~k~~g~a~DL~~~~~-~~~-~~~~v~-~~~~~~a~~~aDvVii~a 77 (314)
T 3nep_X 1 MKVTVIGAGNVGATVAECVARQDVAKEVVMVDIKDGMPQGKALDMRESSP-IHG-FDTRVT-GTNDYGPTEDSDVCIITA 77 (314)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCSSEEEEECSSTTHHHHHHHHHHHHHH-HHT-CCCEEE-EESSSGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCchHHHHHHHHHHhcccc-ccC-CCcEEE-ECCCHHHhCCCCEEEECC
Confidence 479999999999999988743 3333899999876432111111100000 000 011111 124467789999999997
Q ss_pred CCChh---hh-hcc--cH-------HHHhcCCCCcEEEEcCC
Q 016620 245 VLDKT---TY-HLI--NK-------ERLATMKKEAILVNCSR 273 (386)
Q Consensus 245 Plt~~---t~-~li--~~-------~~~~~mk~gailIN~aR 273 (386)
+.... ++ .++ |. +.+....|.+++++++-
T Consensus 78 g~~~kpG~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvtN 119 (314)
T 3nep_X 78 GLPRSPGMSRDDLLAKNTEIVGGVTEQFVEGSPDSTIIVVAN 119 (314)
T ss_dssp CC-------CHHHHHHHHHHHHHHHHHHHTTCTTCEEEECCS
T ss_pred CCCCCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCcEEEecCC
Confidence 64321 11 111 11 23344568899999985
No 252
>1oth_A Protein (ornithine transcarbamoylase); transferase; HET: PAO; 1.85A {Homo sapiens} SCOP: c.78.1.1 c.78.1.1 PDB: 1ep9_A 1fvo_A 1c9y_A* 1fb5_A
Probab=96.51 E-value=0.15 Score=48.75 Aligned_cols=139 Identities=17% Similarity=0.113 Sum_probs=80.0
Q ss_pred HhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecCh-hHHHHHHH
Q 016620 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGR-IGSAYARM 183 (386)
Q Consensus 105 ~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~-IG~~iA~~ 183 (386)
++-.+|+|.|.-+....++ .+++=++.+.+++ | .+.|.+|+++|=|+ +..+.+..
T Consensus 119 A~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------------------g-~l~gl~va~vGD~~~va~Sl~~~ 174 (321)
T 1oth_A 119 AKEASIPIINGLSDLYHPI--QILADYLTLQEHY---------------------S-SLKGLTLSWIGDGNNILHSIMMS 174 (321)
T ss_dssp HHHCSSCEEESCCSSCCHH--HHHHHHHHHHHHH---------------------S-CCTTCEEEEESCSSHHHHHHHTT
T ss_pred HHhCCCCEEcCCCCCCCcH--HHHHHHHHHHHHh---------------------C-CcCCcEEEEECCchhhHHHHHHH
Confidence 3445799999766443332 2344444444321 1 38899999999854 67777766
Q ss_pred HHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCC----hhh--------h
Q 016620 184 MVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD----KTT--------Y 251 (386)
Q Consensus 184 L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt----~~t--------~ 251 (386)
+ ..||++|.+..|..-...+...+...+..+..| ..+....+++|.++++|+|..-+-.. .+. .
T Consensus 175 ~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~~~~~~d~~eav~~aDvvy~d~w~s~g~e~~~~~~~~~~~~ 250 (321)
T 1oth_A 175 A-AKFGMHLQAATPKGYEPDASVTKLAEQYAKENG---TKLLLTNDPLEAAHGGNVLITDTWISMGREEEKKKRLQAFQG 250 (321)
T ss_dssp T-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEEEECCSSCTTCGGGHHHHHHHTTT
T ss_pred H-HHcCCeEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEECHHHHhccCCEEEEeccccccchhhhHHHHHhccC
Confidence 5 478999999987542111111110000001112 12334579999999999999843211 110 1
Q ss_pred hcccHHHHhcCCCCcEEEEc
Q 016620 252 HLINKERLATMKKEAILVNC 271 (386)
Q Consensus 252 ~li~~~~~~~mk~gailIN~ 271 (386)
.-++.+.++.+|++++|.-+
T Consensus 251 y~v~~~~l~~a~~dai~mH~ 270 (321)
T 1oth_A 251 YQVTMKTAKVAASDWTFLHC 270 (321)
T ss_dssp CCBCHHHHHTSCTTCEEEEC
T ss_pred ceECHHHHhhcCCCCEEECC
Confidence 34577777777777777665
No 253
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=96.48 E-value=0.003 Score=58.37 Aligned_cols=101 Identities=19% Similarity=0.206 Sum_probs=63.5
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCCh-------------------hhHHHHHHhhhhhhhhhcC-C
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-------------------ATRLEKFVTAYGQFLKANG-E 219 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~-------------------~~~~~~~~~~~~~~~~~~~-~ 219 (386)
..|.+++|.|+|+|.+|..+|+.|+ ..|. ++..+|+.. .+. +... +.+.... .
T Consensus 27 ~~l~~~~VlVvG~Gg~G~~va~~La-~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka-~~~~----~~l~~~np~ 100 (249)
T 1jw9_B 27 EALKDSRVLIVGLGGLGCAASQYLA-SAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKV-ESAR----DALTRINPH 100 (249)
T ss_dssp HHHHHCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHH-HHHH----HHHHHHCTT
T ss_pred HHHhCCeEEEEeeCHHHHHHHHHHH-HcCCCeEEEEcCCCcccccCCcccccChhhcCcHHH-HHHH----HHHHHHCCC
Confidence 4589999999999999999999985 6676 899999875 111 1100 0111100 0
Q ss_pred CCcccc--cc--CCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016620 220 QPVTWK--RA--SSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 220 ~~~~~~--~~--~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~ 271 (386)
...... .. .+++++++++|+|+.+++ +.+++.++++...+. +..+|+.
T Consensus 101 ~~v~~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~~~~l~~~~~~~---~~p~i~~ 152 (249)
T 1jw9_B 101 IAITPVNALLDDAELAALIAEHDLVLDCTD-NVAVRNQLNAGCFAA---KVPLVSG 152 (249)
T ss_dssp SEEEEECSCCCHHHHHHHHHTSSEEEECCS-SHHHHHHHHHHHHHH---TCCEEEE
T ss_pred cEEEEEeccCCHhHHHHHHhCCCEEEEeCC-CHHHHHHHHHHHHHc---CCCEEEe
Confidence 000000 01 135678899999999996 577888887765553 3345554
No 254
>3pqe_A L-LDH, L-lactate dehydrogenase; FBP, oxidoreductase; 2.20A {Bacillus subtilis} PDB: 3pqf_A* 3pqd_A*
Probab=96.43 E-value=0.0079 Score=57.90 Aligned_cols=104 Identities=23% Similarity=0.335 Sum_probs=59.0
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
.++|+|+|.|.||.++|..|+ ..|. +|..+|...........+.-.. ......+... ..+..+.+++||+|++
T Consensus 5 ~~kI~ViGaG~vG~~~a~~l~-~~~~~~~l~l~D~~~~k~~g~a~DL~~~--~~~~~~~v~i--~~~~~~a~~~aDvVvi 79 (326)
T 3pqe_A 5 VNKVALIGAGFVGSSYAFALI-NQGITDELVVIDVNKEKAMGDVMDLNHG--KAFAPQPVKT--SYGTYEDCKDADIVCI 79 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECSCHHHHHHHHHHHHHT--GGGSSSCCEE--EEECGGGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEecchHHHHHHHHHHHhc--cccccCCeEE--EeCcHHHhCCCCEEEE
Confidence 568999999999999999874 3444 8999998754321111111000 0000011111 1223467899999999
Q ss_pred ccCCC--h-hhh-hcc--c----H---HHHhcCCCCcEEEEcCC
Q 016620 243 HPVLD--K-TTY-HLI--N----K---ERLATMKKEAILVNCSR 273 (386)
Q Consensus 243 ~lPlt--~-~t~-~li--~----~---~~~~~mk~gailIN~aR 273 (386)
+.+.. + .++ .++ | . +.+....|.+++++++-
T Consensus 80 ~ag~p~kpG~~R~dL~~~N~~Iv~~i~~~I~~~~p~a~vlvvtN 123 (326)
T 3pqe_A 80 CAGANQKPGETRLELVEKNLKIFKGIVSEVMASGFDGIFLVATN 123 (326)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred ecccCCCCCccHHHHHHHHHHHHHHHHHHHHHhcCCeEEEEcCC
Confidence 97532 1 111 111 1 1 22333467889999974
No 255
>3rui_A Ubiquitin-like modifier-activating enzyme ATG7; autophagosome formation, non-canonical E1, ATP BI UBL, ATG8, ATG12, ATG10, ATG3, UBL activation, thiolation; 1.91A {Saccharomyces cerevisiae} PDB: 3t7e_A 3vh3_A 3vh4_A*
Probab=96.42 E-value=0.018 Score=55.60 Aligned_cols=132 Identities=14% Similarity=0.157 Sum_probs=76.9
Q ss_pred chhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCC
Q 016620 120 TETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLY 198 (386)
Q Consensus 120 ~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~ 198 (386)
....||.++-+=|-+.| |.-|... ....|++++|.|||+|.+|..+|+.|+ ..|. ++..+|..
T Consensus 4 p~~~~~~~~~lnl~lm~-------------wRll~~~--g~~kL~~~~VlIvGaGGlGs~va~~La-~aGVg~ItlvD~D 67 (340)
T 3rui_A 4 PLKIADQSVDLNLKLMK-------------WRILPDL--NLDIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNG 67 (340)
T ss_dssp HHHHHHHHHHHHHHHHH-------------HHTCTTC--CHHHHHTCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCC
T ss_pred HHHHHHHHHHHHHHHHH-------------Hhhcchh--hHHHHhCCEEEEECCCHHHHHHHHHHH-HcCCCEEEEecCC
Confidence 34567777666555555 3333221 114689999999999999999999985 5676 68888864
Q ss_pred hhhH--H-HH-----------HHhhhhhhhhhcCCCCccccc---------------------cCCHHHHhhhCCEEEEc
Q 016620 199 QATR--L-EK-----------FVTAYGQFLKANGEQPVTWKR---------------------ASSMDEVLREADVISLH 243 (386)
Q Consensus 199 ~~~~--~-~~-----------~~~~~~~~~~~~~~~~~~~~~---------------------~~~l~ell~~aDiVvl~ 243 (386)
.-.. + ++ ..+...+.++.... ...... ...++++++++|+|+.|
T Consensus 68 ~Ve~SNL~RQ~l~~~~diG~~Ka~aaa~~L~~inP-~v~v~~~~~~i~~~g~~~~~~~~~~~~~~~l~~~l~~~DlVvd~ 146 (340)
T 3rui_A 68 TVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP-LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLL 146 (340)
T ss_dssp BCCTTSTTTSTTCCGGGTTSBHHHHHHHHHHHHCT-TCEEEEECCCCCCTTSCCSCHHHHHHHHHHHHHHHHHCSEEEEC
T ss_pred EeccccccccccCChhhcChHHHHHHHHHHHHhCC-CCEEEEEeccccccCcccchhhhhcCCHHHHHhhhccCCEEEec
Confidence 3100 0 00 00000011111110 011111 11356789999999999
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~a 272 (386)
+- +.+++.+++..... .+..+|+.+
T Consensus 147 tD-n~~tR~lin~~c~~---~~~plI~aa 171 (340)
T 3rui_A 147 VD-SRESRWLPSLLSNI---ENKTVINAA 171 (340)
T ss_dssp CS-STGGGHHHHHHHHH---TTCEEEEEE
T ss_pred CC-CHHHHHHHHHHHHH---cCCcEEEee
Confidence 86 56788888876654 345677754
No 256
>1ur5_A Malate dehydrogenase; oxidoreductase, tricarboxylic acid cycle; HET: NAD; 1.75A {Chloroflexus aurantiacus} SCOP: c.2.1.5 d.162.1.1 PDB: 1uxg_A* 1guy_A* 1uxk_A* 1uxh_A* 1uxj_A* 1uxi_A*
Probab=96.39 E-value=0.0071 Score=57.64 Aligned_cols=77 Identities=17% Similarity=0.247 Sum_probs=47.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|+|.|.+|..+|..++ ..|. +|..+|.+.... +.............. .........+. +.+++||+|+++.
T Consensus 3 ~kI~VIGaG~vG~~~a~~la-~~g~~~v~L~Di~~~~~-~g~~~dl~~~~~~~~-~~~~i~~t~d~-~a~~~aD~Vi~a~ 78 (309)
T 1ur5_A 3 KKISIIGAGFVGSTTAHWLA-AKELGDIVLLDIVEGVP-QGKALDLYEASPIEG-FDVRVTGTNNY-ADTANSDVIVVTS 78 (309)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSSSSHH-HHHHHHHHTTHHHHT-CCCCEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHH-HCCCCeEEEEeCCccHH-HHHHHhHHHhHhhcC-CCeEEEECCCH-HHHCCCCEEEEcC
Confidence 58999999999999999874 5564 799999875432 211111000000001 11122222566 6789999999997
Q ss_pred CC
Q 016620 245 VL 246 (386)
Q Consensus 245 Pl 246 (386)
+.
T Consensus 79 g~ 80 (309)
T 1ur5_A 79 GA 80 (309)
T ss_dssp CC
T ss_pred CC
Confidence 53
No 257
>3tl2_A Malate dehydrogenase; center for structural genomics of infectious diseases, csgid dehydrogenase, oxidoreductase, citric acid cycle; 1.70A {Bacillus anthracis}
Probab=96.39 E-value=0.012 Score=56.27 Aligned_cols=106 Identities=20% Similarity=0.230 Sum_probs=60.3
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCCh-hhHHHHH-HhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ-ATRLEKF-VTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
..++|+|+|.|.+|..+|..++ ..|. +|..+|+.. ....+.. .+..+.. .............+ .+.+++||+|
T Consensus 7 ~~~kv~ViGaG~vG~~ia~~l~-~~g~~~v~l~D~~~~~~~~~g~a~dl~~~~--~~~~~~~~i~~t~d-~~a~~~aDvV 82 (315)
T 3tl2_A 7 KRKKVSVIGAGFTGATTAFLLA-QKELADVVLVDIPQLENPTKGKALDMLEAS--PVQGFDANIIGTSD-YADTADSDVV 82 (315)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECCGGGHHHHHHHHHHHHHHH--HHHTCCCCEEEESC-GGGGTTCSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeccchHHHHHHhhhhHHHhh--hhccCCCEEEEcCC-HHHhCCCCEE
Confidence 4678999999999999999874 5677 999999984 2222211 1111110 00001111111223 4568999999
Q ss_pred EEccCC--Ch-hhh-hcc--c----H---HHHhcCCCCcEEEEcCC
Q 016620 241 SLHPVL--DK-TTY-HLI--N----K---ERLATMKKEAILVNCSR 273 (386)
Q Consensus 241 vl~lPl--t~-~t~-~li--~----~---~~~~~mk~gailIN~aR 273 (386)
+++... .+ .++ .++ | + +.+....|.+++++++-
T Consensus 83 Iiaag~p~kpg~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vlvvsN 128 (315)
T 3tl2_A 83 VITAGIARKPGMSRDDLVATNSKIMKSITRDIAKHSPNAIIVVLTN 128 (315)
T ss_dssp EECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEECCC
Confidence 999642 22 111 122 1 1 12233358899999984
No 258
>2p2s_A Putative oxidoreductase; YP_050235.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.25A {Pectobacterium atrosepticum SCRI1043}
Probab=96.38 E-value=0.014 Score=55.87 Aligned_cols=107 Identities=12% Similarity=0.111 Sum_probs=62.5
Q ss_pred CeEEEEecChhHH-HHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEE
Q 016620 166 QTVGVIGAGRIGS-AYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~-~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVv 241 (386)
.+|||||+|.+|. .+++.+ +.-++++ .++|++.... +.+.+.| + ....+.+++++++ +.|+|+
T Consensus 5 ~rvgiiG~G~~~~~~~~~~l-~~~~~~lvav~d~~~~~~-~~~a~~~-------~----~~~~~~~~~~ll~~~~~D~V~ 71 (336)
T 2p2s_A 5 IRFAAIGLAHNHIYDMCQQL-IDAGAELAGVFESDSDNR-AKFTSLF-------P----SVPFAASAEQLITDASIDLIA 71 (336)
T ss_dssp CEEEEECCSSTHHHHHHHHH-HHTTCEEEEEECSCTTSC-HHHHHHS-------T----TCCBCSCHHHHHTCTTCCEEE
T ss_pred cEEEEECCChHHHHHhhhhh-cCCCcEEEEEeCCCHHHH-HHHHHhc-------C----CCcccCCHHHHhhCCCCCEEE
Confidence 4799999999996 677776 4458885 5788876532 2221111 1 1123578999997 689999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCC
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNP 290 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~ 290 (386)
+|+|... .. +-....++.|. +++.- .--.+-+.++|.++.++..
T Consensus 72 i~tp~~~--h~---~~~~~al~aGkhVl~EKP~a~~~~e~~~l~~~a~~~g 117 (336)
T 2p2s_A 72 CAVIPCD--RA---ELALRTLDAGKDFFTAKPPLTTLEQLDAVQRRVAETG 117 (336)
T ss_dssp ECSCGGG--HH---HHHHHHHHTTCEEEECSSCCSCHHHHHHHHHHHHHHC
T ss_pred EeCChhh--HH---HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHcC
Confidence 9999532 21 22223344444 55542 1123334455666665543
No 259
>3ldh_A Lactate dehydrogenase; oxidoreductase, CHOH donor, NAD acceptor; HET: NAD; 3.00A {Squalus acanthias} SCOP: i.12.1.1
Probab=96.38 E-value=0.0052 Score=59.25 Aligned_cols=105 Identities=7% Similarity=0.060 Sum_probs=61.1
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
..++|+|+|.|.||..+|..++ ..|. +|..+|...........+..+.. ... .........+.++ +++||+|+
T Consensus 20 ~~~kV~ViGaG~vG~~~a~~la-~~g~~~ev~L~Di~~~~~~g~a~DL~~~~--~~~-~~~~i~~t~d~~~-~~daDiVI 94 (330)
T 3ldh_A 20 SYNKITVVGCDAVGMADAISVL-MKDLADEVALVDVMEDKLKGEMMDLEHGS--LFL-HTAKIVSGKDYSV-SAGSKLVV 94 (330)
T ss_dssp CCCEEEEESTTHHHHHHHHHHH-HHCCCSEEEEECSCHHHHHHHHHHHHHHG--GGS-CCSEEEEESSSCS-CSSCSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCCCeEEEEECCHHHHHHHHHHhhhhh--hcc-cCCeEEEcCCHHH-hCCCCEEE
Confidence 5689999999999999998874 3444 89999987643222111111110 000 1111222345655 89999999
Q ss_pred EccCCCh---hhh-hcccH---------HHHhcCCCCcEEEEcCC
Q 016620 242 LHPVLDK---TTY-HLINK---------ERLATMKKEAILVNCSR 273 (386)
Q Consensus 242 l~lPlt~---~t~-~li~~---------~~~~~mk~gailIN~aR 273 (386)
++..... .++ .++.. +.+....|.+++++++-
T Consensus 95 itaG~p~kpG~tR~dll~~N~~I~k~i~~~I~k~~P~a~ilvvtN 139 (330)
T 3ldh_A 95 ITAGARQQEGESRLNLVQRNVNIFKFIIPNIVKHSPDCLKELHPE 139 (330)
T ss_dssp ECCSCCCCSSCCTTGGGHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred EeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhhCCCceEEeCCC
Confidence 9864321 111 11111 22333478999999874
No 260
>3gd5_A Otcase, ornithine carbamoyltransferase; structural genomics, NYSGXRC, target 9454P, operon, amino-acid biosynthesis, ARGI biosynthesis; 2.10A {Gloeobacter violaceus}
Probab=96.37 E-value=0.3 Score=46.68 Aligned_cols=106 Identities=15% Similarity=0.096 Sum_probs=66.4
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+.|.+|+++|= +++..+.+..+ ..+|++|.+..|..-...+.+.+...+..+..+ ..+....+++|.++++|+|
T Consensus 154 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav~~aDvv 229 (323)
T 3gd5_A 154 RLAGLKLAYVGDGNNVAHSLLLGC-AKVGMSIAVATPEGFTPDPAVSARASEIAGRTG---AEVQILRDPFEAARGAHIL 229 (323)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEE
T ss_pred CCCCCEEEEECCCCcHHHHHHHHH-HHcCCEEEEECCCcccCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhcCCCEE
Confidence 378999999986 67788888876 578999999887532111111110000001111 1233457999999999999
Q ss_pred EEccCCChh------------hhhcccHHHHhcCCCCcEEEEc
Q 016620 241 SLHPVLDKT------------TYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 241 vl~lPlt~~------------t~~li~~~~~~~mk~gailIN~ 271 (386)
..-.-.... ...-++.+.++.+|++++|.-+
T Consensus 230 yt~~wqs~g~~~~~~~~~~~~~~y~vt~ell~~ak~dai~mHc 272 (323)
T 3gd5_A 230 YTDVWTSMGQEAETQHRLQLFEQYQINAALLNCAAAEAIVLHC 272 (323)
T ss_dssp EECCCC---------CCHHHHTTCCBCHHHHHTSCTTCEEEEC
T ss_pred EEeceecCCCcccchHHHHHhhccCCCHHHHhhcCCCcEEECC
Confidence 876542211 1134788888888888888765
No 261
>1pg5_A Aspartate carbamoyltransferase; 2.60A {Sulfolobus acidocaldarius} SCOP: c.78.1.1 c.78.1.1 PDB: 2be9_A*
Probab=96.37 E-value=0.069 Score=50.64 Aligned_cols=99 Identities=16% Similarity=0.236 Sum_probs=67.6
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
.+.|.+|+++|= |++..+.+..+ ..| |++|.+..|..-...+.. .+. .+..+....+++|+++++
T Consensus 146 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~-------~~~---~g~~~~~~~d~~eav~~a 214 (299)
T 1pg5_A 146 TIDGLVFALLGDLKYARTVNSLLRIL-TRFRPKLVYLISPQLLRARKEI-------LDE---LNYPVKEVENPFEVINEV 214 (299)
T ss_dssp CSTTCEEEEEECCSSCHHHHHHHHHG-GGSCCSEEEEECCGGGCCCHHH-------HTT---CCSCEEEESCGGGTGGGC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCchhcCCHHH-------HHH---cCCeEEEeCCHHHHhcCC
Confidence 388999999998 59999999987 578 999999988542111110 111 112233457899999999
Q ss_pred CEEEEccCCChh-----h------hhcccHHHHhcCCCCcEEEEc
Q 016620 238 DVISLHPVLDKT-----T------YHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 238 DiVvl~lPlt~~-----t------~~li~~~~~~~mk~gailIN~ 271 (386)
|+|..-.-..+. . ..-++.+.++++|++++|.-+
T Consensus 215 Dvvyt~~~q~er~~~~~~~~~~~~~y~v~~~~l~~a~~~ai~mH~ 259 (299)
T 1pg5_A 215 DVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHP 259 (299)
T ss_dssp SEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECC
T ss_pred CEEEeCCcccccccCHHHHHHhhcCcccCHHHHHhcCCCCEEECC
Confidence 999876554321 0 234677788888888777665
No 262
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=96.36 E-value=0.01 Score=59.61 Aligned_cols=103 Identities=17% Similarity=0.249 Sum_probs=71.1
Q ss_pred ccccCCCeEEEEecC----------hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC
Q 016620 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (386)
Q Consensus 160 g~~l~g~~vgIvG~G----------~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (386)
+..+.|++|+|+|+. +-...+++.| ...|++|.+|||........ .| + ......+
T Consensus 317 ~~~~~~~~v~vlGlafK~~~dD~ReSp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~----------~-~~~~~~~ 381 (446)
T 4a7p_A 317 GGDVRGKTVGILGLTFKPNTDDMRDAPSLSIIAAL-QDAGATVKAYDPEGVEQASK---ML----------T-DVEFVEN 381 (446)
T ss_dssp TSCCTTCEEEEECCSSSTTSCCCTTCSHHHHHHHH-HHTSCEEEEECSSCHHHHGG---GC----------S-SCCBCSC
T ss_pred cccCCCCEEEEEEEEeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCCHhHHH---hc----------C-CceEecC
Confidence 456899999999997 7789999998 68999999999987532111 00 0 1223468
Q ss_pred HHHHhhhCCEEEEccCCChhhhhcccHHHH-hcCCCCcEEEEcCCCcccCHHHH
Q 016620 230 MDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEVAL 282 (386)
Q Consensus 230 l~ell~~aDiVvl~lPlt~~t~~li~~~~~-~~mk~gailIN~aRg~~vde~aL 282 (386)
+++.++.+|.|+++++-. +-+. ++-+.+ +.|+ +.+++|+ |+ +.|.+.+
T Consensus 382 ~~~~~~~ad~vvi~t~~~-~f~~-~d~~~~~~~~~-~~~i~D~-r~-~~~~~~~ 430 (446)
T 4a7p_A 382 PYAAADGADALVIVTEWD-AFRA-LDLTRIKNSLK-SPVLVDL-RN-IYPPAEL 430 (446)
T ss_dssp HHHHHTTBSEEEECSCCT-TTTS-CCHHHHHTTBS-SCBEECS-SC-CSCHHHH
T ss_pred hhHHhcCCCEEEEeeCCH-Hhhc-CCHHHHHHhcC-CCEEEEC-CC-CCCHHHH
Confidence 899999999999999752 3222 454444 4565 4678884 54 4565444
No 263
>1u8x_X Maltose-6'-phosphate glucosidase; structural genomics, PSI, protein structure initiative, MCSG glucosidase, NAD-dependent; HET: G6P NAD; 2.05A {Bacillus subtilis} SCOP: c.2.1.5 d.162.1.2
Probab=96.35 E-value=0.0079 Score=60.81 Aligned_cols=80 Identities=15% Similarity=0.341 Sum_probs=50.1
Q ss_pred CCeEEEEecChh-HHHHHHHHHh---cC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 165 g~~vgIvG~G~I-G~~iA~~L~~---~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.++|+|||.|.. |.++|..|++ ++ +-+|..||+..... +...+.-...+...+ .+.......++++.++.||+
T Consensus 28 ~~KIaVIGaGsv~~~ala~~L~~~~~~l~~~eV~L~Di~~e~~-~~~~~~~~~~l~~~~-~~~~I~~t~D~~eal~~AD~ 105 (472)
T 1u8x_X 28 SFSIVIAGGGSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQ-DRIAGACDVFIREKA-PDIEFAATTDPEEAFTDVDF 105 (472)
T ss_dssp CEEEEEECTTSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHH-HHHHHHHHHHHHHHC-TTSEEEEESCHHHHHSSCSE
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCCCCCCCCEEEEEeCCHHHH-HHHHHHHHHHhccCC-CCCEEEEECCHHHHHcCCCE
Confidence 468999999998 6667655543 45 66899999987532 111111000111111 23333334688899999999
Q ss_pred EEEccCC
Q 016620 240 ISLHPVL 246 (386)
Q Consensus 240 Vvl~lPl 246 (386)
|+++.|.
T Consensus 106 VViaag~ 112 (472)
T 1u8x_X 106 VMAHIRV 112 (472)
T ss_dssp EEECCCT
T ss_pred EEEcCCC
Confidence 9999986
No 264
>4f2g_A Otcase 1, ornithine carbamoyltransferase 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=96.35 E-value=0.14 Score=48.70 Aligned_cols=101 Identities=14% Similarity=0.235 Sum_probs=65.0
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-...+.+ ..+ ..+..+....+++|.++++|+|
T Consensus 151 ~l~glkva~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~-------~~~--~~g~~v~~~~d~~eav~~aDvv 220 (309)
T 4f2g_A 151 PIRGKTVAWVGDANNMLYTWIQAA-RILDFKLQLSTPPGYALDAKL-------VDA--ESAPFYQVFDDPNEACKGADLV 220 (309)
T ss_dssp CCTTCEEEEESCCCHHHHHHHHHH-HHHTCEEEEECCGGGCCCGGG-------SCG--GGGGGEEECSSHHHHTTTCSEE
T ss_pred CCCCCEEEEECCCcchHHHHHHHH-HHcCCEEEEECCcccCCCHHH-------HHH--HcCCeEEEEcCHHHHhcCCCEE
Confidence 388999999986 56777888776 478999999987432110000 000 0112233457999999999999
Q ss_pred EEcc----CCCh---h-----hhhcccHHHHhcCCCCcEEEEcC
Q 016620 241 SLHP----VLDK---T-----TYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 241 vl~l----Plt~---~-----t~~li~~~~~~~mk~gailIN~a 272 (386)
..-. .... + ...-++.+.++.+|++++|.-+.
T Consensus 221 yt~~w~smg~e~~~~~r~~~~~~y~v~~~~l~~a~~~ai~mH~l 264 (309)
T 4f2g_A 221 TTDVWTSMGFEAENEARKRAFADWCVDEEMMSHANSDALFMHCL 264 (309)
T ss_dssp EECCC------------CCSGGGGCBCHHHHTTSCTTCEEEECS
T ss_pred EecccccCcchhhHHHHHHHhcCceeCHHHHHhcCCCeEEECCC
Confidence 8754 1100 0 12446888888888888887663
No 265
>3gvi_A Malate dehydrogenase; NAD, oxidoreductase, tricarboxylic acid cycle, structural genomics; HET: ADP; 2.25A {Brucella melitensis biovar ABORTUS2308} PDB: 3gvh_A*
Probab=96.34 E-value=0.0093 Score=57.37 Aligned_cols=107 Identities=17% Similarity=0.275 Sum_probs=59.8
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
...++|+|+|.|.+|..+|..|+ ..|. +|..+|...........+...... ..+ .+.......+. +.+++||+|+
T Consensus 5 m~~~kI~viGaG~vG~~~a~~l~-~~~~~~v~L~Di~~~~~~g~~~dl~~~~~-~~~-~~~~v~~t~d~-~a~~~aDiVI 80 (324)
T 3gvi_A 5 MARNKIALIGSGMIGGTLAHLAG-LKELGDVVLFDIAEGTPQGKGLDIAESSP-VDG-FDAKFTGANDY-AAIEGADVVI 80 (324)
T ss_dssp -CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHHHHHHHH-HHT-CCCCEEEESSG-GGGTTCSEEE
T ss_pred CcCCEEEEECCCHHHHHHHHHHH-hCCCCeEEEEeCCchhHHHHHHHHhchhh-hcC-CCCEEEEeCCH-HHHCCCCEEE
Confidence 34679999999999999999874 4455 999999876532111111100000 000 11122222454 7889999999
Q ss_pred EccCCC--hh-hh-hcc--cH-------HHHhcCCCCcEEEEcCC
Q 016620 242 LHPVLD--KT-TY-HLI--NK-------ERLATMKKEAILVNCSR 273 (386)
Q Consensus 242 l~lPlt--~~-t~-~li--~~-------~~~~~mk~gailIN~aR 273 (386)
++.+.. +. |+ .++ |. +.+....|.+++++++-
T Consensus 81 iaag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~iivvtN 125 (324)
T 3gvi_A 81 VTAGVPRKPGMSRDDLLGINLKVMEQVGAGIKKYAPEAFVICITN 125 (324)
T ss_dssp ECCSCCCC-----CHHHHHHHHHHHHHHHHHHHHCTTCEEEECCS
T ss_pred EccCcCCCCCCCHHHHHHhhHHHHHHHHHHHHHHCCCeEEEecCC
Confidence 997532 11 11 111 11 12223358899999875
No 266
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=96.32 E-value=0.005 Score=57.69 Aligned_cols=104 Identities=18% Similarity=0.154 Sum_probs=63.4
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.++.|+++.|+|.|..+++++-.|+ ..|+ +|++++|+..+.. +..+.+ .... .... .....+.++++|+
T Consensus 121 ~~~~~~~~lilGaGGaarai~~aL~-~~g~~~i~i~nRt~~ra~-~la~~~----~~~~-~~~~---~~~~~~~~~~~dl 190 (269)
T 3tum_A 121 FEPAGKRALVIGCGGVGSAIAYALA-EAGIASITLCDPSTARMG-AVCELL----GNGF-PGLT---VSTQFSGLEDFDL 190 (269)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHH-HTTCSEEEEECSCHHHHH-HHHHHH----HHHC-TTCE---EESCCSCSTTCSE
T ss_pred CCcccCeEEEEecHHHHHHHHHHHH-HhCCCeEEEeCCCHHHHH-HHHHHH----hccC-Ccce---ehhhhhhhhcccc
Confidence 3578999999999999999999874 5675 8999999875432 111111 1100 0000 1111233567999
Q ss_pred EEEccCCChhh--hhcccHHHHhcCCCCcEEEEcCCC
Q 016620 240 ISLHPVLDKTT--YHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 240 Vvl~lPlt~~t--~~li~~~~~~~mk~gailIN~aRg 274 (386)
|+.++|..-.. ..-+....++.++++.++.|+--.
T Consensus 191 iiNaTp~Gm~~~~~~p~~~~~~~~l~~~~~v~D~vY~ 227 (269)
T 3tum_A 191 VANASPVGMGTRAELPLSAALLATLQPDTLVADVVTS 227 (269)
T ss_dssp EEECSSTTCSTTCCCSSCHHHHHTCCTTSEEEECCCS
T ss_pred cccCCccccCCCCCCCCChHHHhccCCCcEEEEEccC
Confidence 99999964211 112455666667776666666443
No 267
>3fi9_A Malate dehydrogenase; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Porphyromonas gingivalis}
Probab=96.29 E-value=0.0074 Score=58.54 Aligned_cols=77 Identities=23% Similarity=0.290 Sum_probs=49.7
Q ss_pred cCCCeEEEEec-ChhHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 163 LKGQTVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 163 l~g~~vgIvG~-G~IG~~iA~~L~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
+.+++|+|+|. |.+|+.+|..++ ..| -+|..+|...........+ +..............+..+.+++||+
T Consensus 6 ~~~~KV~ViGaaG~VG~~~a~~l~-~~g~~~evvLiDi~~~k~~g~a~D-----L~~~~~~~~~i~~t~d~~~al~dADv 79 (343)
T 3fi9_A 6 LTEEKLTIVGAAGMIGSNMAQTAA-MMRLTPNLCLYDPFAVGLEGVAEE-----IRHCGFEGLNLTFTSDIKEALTDAKY 79 (343)
T ss_dssp SCSSEEEEETTTSHHHHHHHHHHH-HTTCCSCEEEECSCHHHHHHHHHH-----HHHHCCTTCCCEEESCHHHHHTTEEE
T ss_pred cCCCEEEEECCCChHHHHHHHHHH-hcCCCCEEEEEeCCchhHHHHHHh-----hhhCcCCCCceEEcCCHHHHhCCCCE
Confidence 46789999998 999999997763 455 4899999875432111111 11111111122234678888999999
Q ss_pred EEEccC
Q 016620 240 ISLHPV 245 (386)
Q Consensus 240 Vvl~lP 245 (386)
|+++..
T Consensus 80 VvitaG 85 (343)
T 3fi9_A 80 IVSSGG 85 (343)
T ss_dssp EEECCC
T ss_pred EEEccC
Confidence 999853
No 268
>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A
Probab=96.28 E-value=0.0074 Score=60.64 Aligned_cols=75 Identities=8% Similarity=0.074 Sum_probs=49.0
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc---cccccCCHHHHhhhCCEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV---TWKRASSMDEVLREADVI 240 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~ell~~aDiV 240 (386)
.+++|+|+|.|.||+.+++.|+ ..|.+|.+++|+.... +... ...+.... ......+++++++.+|+|
T Consensus 2 ~~k~VlViGaG~iG~~ia~~L~-~~G~~V~v~~R~~~~a-~~la-------~~~~~~~~~~~Dv~d~~~l~~~l~~~DvV 72 (450)
T 1ff9_A 2 ATKSVLMLGSGFVTRPTLDVLT-DSGIKVTVACRTLESA-KKLS-------AGVQHSTPISLDVNDDAALDAEVAKHDLV 72 (450)
T ss_dssp CCCEEEEECCSTTHHHHHHHHH-TTTCEEEEEESSHHHH-HHTT-------TTCTTEEEEECCTTCHHHHHHHHTTSSEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCcCEEEEEECCHHHH-HHHH-------HhcCCceEEEeecCCHHHHHHHHcCCcEE
Confidence 4689999999999999999985 6889999999976432 1110 00000000 011112456778899999
Q ss_pred EEccCCC
Q 016620 241 SLHPVLD 247 (386)
Q Consensus 241 vl~lPlt 247 (386)
+.++|..
T Consensus 73 In~a~~~ 79 (450)
T 1ff9_A 73 ISLIPYT 79 (450)
T ss_dssp EECCC--
T ss_pred EECCccc
Confidence 9999964
No 269
>2i6t_A Ubiquitin-conjugating enzyme E2-like isoform A; L-lactate dehydrogenase, oxidoreductase, ubiquitin-protein L unknown function; 2.10A {Homo sapiens} PDB: 3dl2_A
Probab=96.23 E-value=0.0055 Score=58.37 Aligned_cols=98 Identities=11% Similarity=0.125 Sum_probs=56.0
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
.++|+|||.|.+|..+|..++ .-|. +|..+|.... ......+. ...... ......++ +.+++||+|++
T Consensus 14 ~~kV~ViGaG~vG~~~a~~l~-~~g~~~ev~L~Di~~~-~~g~a~dl-----~~~~~~--~i~~t~d~-~~l~~aD~Vi~ 83 (303)
T 2i6t_A 14 VNKITVVGGGELGIACTLAIS-AKGIADRLVLLDLSEG-TKGATMDL-----EIFNLP--NVEISKDL-SASAHSKVVIF 83 (303)
T ss_dssp CCEEEEECCSHHHHHHHHHHH-HHTCCSEEEEECCC------CHHHH-----HHHTCT--TEEEESCG-GGGTTCSEEEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hcCCCCEEEEEcCCcc-hHHHHHHH-----hhhcCC--CeEEeCCH-HHHCCCCEEEE
Confidence 378999999999999998774 3345 9999998764 21111111 011111 12223566 66899999999
Q ss_pred ccCCCh----------hhhhcc---cHHHHhcCCCCcEEEEcCC
Q 016620 243 HPVLDK----------TTYHLI---NKERLATMKKEAILVNCSR 273 (386)
Q Consensus 243 ~lPlt~----------~t~~li---~~~~~~~mk~gailIN~aR 273 (386)
+..... ++..++ .++.-+. .+.+++++++-
T Consensus 84 aag~~~pG~tR~dl~~~n~~i~~~i~~~i~~~-~p~a~iiv~sN 126 (303)
T 2i6t_A 84 TVNSLGSSQSYLDVVQSNVDMFRALVPALGHY-SQHSVLLVASQ 126 (303)
T ss_dssp CCCC----CCHHHHHHHHHHHHHHHHHHHHHH-TTTCEEEECSS
T ss_pred cCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-CCCeEEEEcCC
Confidence 973211 111111 1222222 48889988876
No 270
>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5
Probab=96.22 E-value=0.021 Score=53.38 Aligned_cols=104 Identities=15% Similarity=0.231 Sum_probs=62.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
.++++.|+|.|.+|++++..| ...|+ +|++++|+.... +...+.+ +. .+. .++. +.++|+|+.
T Consensus 118 ~~~~vlvlGaGgaarav~~~L-~~~G~~~i~v~nRt~~ka-~~la~~~-------~~---~~~--~~~~--~~~~DivIn 181 (271)
T 1npy_A 118 KNAKVIVHGSGGMAKAVVAAF-KNSGFEKLKIYARNVKTG-QYLAALY-------GY---AYI--NSLE--NQQADILVN 181 (271)
T ss_dssp TTSCEEEECSSTTHHHHHHHH-HHTTCCCEEEECSCHHHH-HHHHHHH-------TC---EEE--SCCT--TCCCSEEEE
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCCEEEEEeCCHHHH-HHHHHHc-------CC---ccc--hhhh--cccCCEEEE
Confidence 467899999999999999998 57897 799999986542 1111111 10 111 1222 468999999
Q ss_pred ccCCChhhh-----hcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHc
Q 016620 243 HPVLDKTTY-----HLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQ 288 (386)
Q Consensus 243 ~lPlt~~t~-----~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~ 288 (386)
++|..-... -.+..+.+ +++.+++|+.-.+ .++ .|++..++
T Consensus 182 aTp~gm~~~~~~~~~~~~~~~l---~~~~~v~DlvY~P-~~T-~ll~~A~~ 227 (271)
T 1npy_A 182 VTSIGMKGGKEEMDLAFPKAFI---DNASVAFDVVAMP-VET-PFIRYAQA 227 (271)
T ss_dssp CSSTTCTTSTTTTSCSSCHHHH---HHCSEEEECCCSS-SSC-HHHHHHHH
T ss_pred CCCCCccCccccCCCCCCHHHc---CCCCEEEEeecCC-CCC-HHHHHHHH
Confidence 999643211 11333333 4567777877643 233 44444443
No 271
>2w37_A Ornithine carbamoyltransferase, catabolic; transcarbamylase, metal binding-site, hexamer, cytoplasm, arginine metabolism; 2.10A {Lactobacillus hilgardii}
Probab=96.22 E-value=0.24 Score=48.08 Aligned_cols=139 Identities=17% Similarity=0.182 Sum_probs=84.5
Q ss_pred HhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecC--hhHHHHHH
Q 016620 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAG--RIGSAYAR 182 (386)
Q Consensus 105 ~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G--~IG~~iA~ 182 (386)
++-.+|+|.|.-+....++ .+|+=++.+.+++ | .+.|.+|+++|=| +++.+++.
T Consensus 140 A~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~---------------------g-~l~gl~va~vGD~~~rva~Sl~~ 195 (359)
T 2w37_A 140 ARDSGVPVWNGLTDEWHPT--QMLADFMTVKENF---------------------G-KLQGLTLTFMGDGRNNVANSLLV 195 (359)
T ss_dssp HHHSSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------------------S-CCTTCEEEEESCTTSHHHHHHHH
T ss_pred HHhCCCCEEcCCCCCCCcc--HHHHHHHHHHHHh---------------------C-CcCCeEEEEECCCccchHHHHHH
Confidence 3455799999655433222 2344344443321 1 4889999999986 99999999
Q ss_pred HHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCC------hh-----hh
Q 016620 183 MMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLD------KT-----TY 251 (386)
Q Consensus 183 ~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt------~~-----t~ 251 (386)
.+ ..||++|.+..|..-...+.+.+...+..+..| ..+....+++|.++++|+|..-.-.. .+ ..
T Consensus 196 ~~-~~lG~~v~~~~P~~l~p~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDvvytd~w~smg~ee~~er~~~~~~ 271 (359)
T 2w37_A 196 TG-AILGVNIHIVAPKALFPTEETQNIAKGFAEKSG---AKLVITDDLDEGLKGSNVVYTDVWVSMGESNWEERVKELTP 271 (359)
T ss_dssp HH-HHHTCEEEEECCGGGSCCHHHHHHHHHHHHHHT---CCEEEESCHHHHHTTCSEEEECCSCCTTCTTHHHHHHHHGG
T ss_pred HH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcC---CeEEEEeCHHHHhcCCCEEEEcccccccccchHHHHHHhhc
Confidence 87 478999999987543211111110000001112 12334579999999999998855410 01 12
Q ss_pred hcccHHHHhcCC---CCcEEEEc
Q 016620 252 HLINKERLATMK---KEAILVNC 271 (386)
Q Consensus 252 ~li~~~~~~~mk---~gailIN~ 271 (386)
.-++.+.++.+| ++++|.-+
T Consensus 272 y~v~~ell~~ak~~~~dai~MHc 294 (359)
T 2w37_A 272 YQVNMEAMKKTGTPDDQLIFMHC 294 (359)
T ss_dssp GCBCHHHHHTTCCCGGGCEEEEC
T ss_pred cccCHHHHHhhCCCCCCEEEECC
Confidence 456888888888 88888766
No 272
>3fhl_A Putative oxidoreductase; NAD-binding domain, PSI-2, NYSGXRC, structur genomics, protein structure initiative; 1.93A {Bacteroides fragilis nctc 9343}
Probab=96.21 E-value=0.0071 Score=58.68 Aligned_cols=66 Identities=17% Similarity=0.181 Sum_probs=46.2
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEEE
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiVv 241 (386)
.+|||||+|.||+. .++.+++.-++++. ++|++.....+ ..+ ....+.+++++++. .|+|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~--------------~~~-~~~~~~~~~~ll~~~~vD~V~ 70 (362)
T 3fhl_A 6 IKTGLAAFGMSGQVFHAPFISTNPHFELYKIVERSKELSKE--------------RYP-QASIVRSFKELTEDPEIDLIV 70 (362)
T ss_dssp EEEEESCCSHHHHHTTHHHHHHCTTEEEEEEECSSCCGGGT--------------TCT-TSEEESCSHHHHTCTTCCEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHH--------------hCC-CCceECCHHHHhcCCCCCEEE
Confidence 47999999999997 67766433378875 67877543110 010 12345799999987 89999
Q ss_pred EccCC
Q 016620 242 LHPVL 246 (386)
Q Consensus 242 l~lPl 246 (386)
+|+|.
T Consensus 71 i~tp~ 75 (362)
T 3fhl_A 71 VNTPD 75 (362)
T ss_dssp ECSCG
T ss_pred EeCCh
Confidence 99995
No 273
>1s6y_A 6-phospho-beta-glucosidase; hydrolase, structural genomics, PSI, protein structure initi midwest center for structural genomics; 2.31A {Geobacillus stearothermophilus} SCOP: c.2.1.5 d.162.1.2
Probab=96.18 E-value=0.014 Score=58.64 Aligned_cols=81 Identities=14% Similarity=0.173 Sum_probs=50.7
Q ss_pred CCeEEEEecChh-HHHHHHHHHh---cC-CcEEEEEcCCh--hhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 165 GQTVGVIGAGRI-GSAYARMMVE---GF-KMNLIYYDLYQ--ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 165 g~~vgIvG~G~I-G~~iA~~L~~---~f-g~~V~~~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
.++|+|||.|.. |..++..|++ .+ +-+|..||+.. .. .+...+ ...........+.......++++.++.|
T Consensus 7 ~~KIaVIGaGsv~~~al~~~L~~~~~~l~~~ev~L~Di~~~~e~-~~~~~~-~~~~~~~~~~~~~~i~~t~D~~eal~gA 84 (450)
T 1s6y_A 7 RLKIATIGGGSSYTPELVEGLIKRYHELPVGELWLVDIPEGKEK-LEIVGA-LAKRMVEKAGVPIEIHLTLDRRRALDGA 84 (450)
T ss_dssp CEEEEEETTTCTTHHHHHHHHHHTTTTCCEEEEEEECCGGGHHH-HHHHHH-HHHHHHHHTTCCCEEEEESCHHHHHTTC
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCCCCCCCCEEEEEEcCCChHH-HHHHHH-HHHHHHhhcCCCcEEEEeCCHHHHhCCC
Confidence 358999999999 8887665543 45 56899999977 43 111111 0011111111233333346888999999
Q ss_pred CEEEEccCCC
Q 016620 238 DVISLHPVLD 247 (386)
Q Consensus 238 DiVvl~lPlt 247 (386)
|+|+++.|..
T Consensus 85 D~VVitagv~ 94 (450)
T 1s6y_A 85 DFVTTQFRVG 94 (450)
T ss_dssp SEEEECCCTT
T ss_pred CEEEEcCCCC
Confidence 9999999953
No 274
>3p7m_A Malate dehydrogenase; putative dehydrogenase, enzyme, structural genomics, center structural genomics of infectious diseases, csgid; 2.20A {Francisella tularensis}
Probab=96.16 E-value=0.019 Score=55.14 Aligned_cols=110 Identities=16% Similarity=0.259 Sum_probs=60.7
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
..++|+|+|.|.+|.++|..|+ ..|. +|..+|...........+.-+. ....+ .+.......+ .+.++.||+|++
T Consensus 4 ~~~kI~iiGaG~vG~~~a~~l~-~~~~~~v~l~Di~~~~~~g~a~dL~~~-~~~~~-~~~~v~~t~d-~~a~~~aDvVIi 79 (321)
T 3p7m_A 4 ARKKITLVGAGNIGGTLAHLAL-IKQLGDVVLFDIAQGMPNGKALDLLQT-CPIEG-VDFKVRGTND-YKDLENSDVVIV 79 (321)
T ss_dssp CCCEEEEECCSHHHHHHHHHHH-HTTCCEEEEECSSSSHHHHHHHHHHTT-HHHHT-CCCCEEEESC-GGGGTTCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHH-hCCCceEEEEeCChHHHHHHHHHHHhh-hhhcC-CCcEEEEcCC-HHHHCCCCEEEE
Confidence 3578999999999999998874 3344 9999998764321111111000 00000 1111221234 467899999999
Q ss_pred ccCCC--h-hhh-hcc--cH-------HHHhcCCCCcEEEEcCCCcccCH
Q 016620 243 HPVLD--K-TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDE 279 (386)
Q Consensus 243 ~lPlt--~-~t~-~li--~~-------~~~~~mk~gailIN~aRg~~vde 279 (386)
+.+.. + .++ .++ |. +.+....|.+++++++ ..+|.
T Consensus 80 ~ag~p~k~G~~R~dl~~~N~~i~~~i~~~i~~~~p~a~vivvt--NPvd~ 127 (321)
T 3p7m_A 80 TAGVPRKPGMSRDDLLGINIKVMQTVGEGIKHNCPNAFVICIT--NPLDI 127 (321)
T ss_dssp CCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECC--SSHHH
T ss_pred cCCcCCCCCCCHHHHHHHhHHHHHHHHHHHHHHCCCcEEEEec--CchHH
Confidence 96532 1 111 111 11 1222334889999985 44444
No 275
>4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli}
Probab=96.15 E-value=0.014 Score=56.12 Aligned_cols=68 Identities=12% Similarity=0.145 Sum_probs=46.5
Q ss_pred eEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEEEE
Q 016620 167 TVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVISL 242 (386)
Q Consensus 167 ~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiVvl 242 (386)
++||||+|.||+. .+..+.+.-+++|. ++|++... .+++.+.| +. ...+.++++++++ .|+|++
T Consensus 25 rigiIG~G~ig~~~~~~~~~~~~~~~lvav~d~~~~~-a~~~a~~~-------g~----~~~y~d~~ell~~~~iDaV~I 92 (350)
T 4had_A 25 RFGIISTAKIGRDNVVPAIQDAENCVVTAIASRDLTR-AREMADRF-------SV----PHAFGSYEEMLASDVIDAVYI 92 (350)
T ss_dssp EEEEESCCHHHHHTHHHHHHHCSSEEEEEEECSSHHH-HHHHHHHH-------TC----SEEESSHHHHHHCSSCSEEEE
T ss_pred EEEEEcChHHHHHHHHHHHHhCCCeEEEEEECCCHHH-HHHHHHHc-------CC----CeeeCCHHHHhcCCCCCEEEE
Confidence 7999999999985 56665434478876 57887654 23332222 21 1235799999964 799999
Q ss_pred ccCC
Q 016620 243 HPVL 246 (386)
Q Consensus 243 ~lPl 246 (386)
|+|.
T Consensus 93 ~tP~ 96 (350)
T 4had_A 93 PLPT 96 (350)
T ss_dssp CSCG
T ss_pred eCCC
Confidence 9995
No 276
>3moi_A Probable dehydrogenase; structural genomics, PSI2, MCSG, protein structure initiativ midwest center for structural genomics; 2.50A {Bordetella bronchiseptica}
Probab=96.14 E-value=0.018 Score=56.41 Aligned_cols=69 Identities=19% Similarity=0.283 Sum_probs=48.3
Q ss_pred CeEEEEecC-hhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEEE
Q 016620 166 QTVGVIGAG-RIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G-~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiVv 241 (386)
.+|||||+| .+|+..++.+.+.-++++. ++|++.... +.+.+.| + ...+.+++|++++ .|+|+
T Consensus 3 ~rigiiG~G~~~~~~~~~~l~~~~~~~l~av~d~~~~~~-~~~a~~~-------g-----~~~~~~~~ell~~~~vD~V~ 69 (387)
T 3moi_A 3 IRFGICGLGFAGSVLMAPAMRHHPDAQIVAACDPNEDVR-ERFGKEY-------G-----IPVFATLAEMMQHVQMDAVY 69 (387)
T ss_dssp EEEEEECCSHHHHTTHHHHHHHCTTEEEEEEECSCHHHH-HHHHHHH-------T-----CCEESSHHHHHHHSCCSEEE
T ss_pred eEEEEEeCCHHHHHHHHHHHHhCCCeEEEEEEeCCHHHH-HHHHHHc-------C-----CCeECCHHHHHcCCCCCEEE
Confidence 479999999 9999999887443477765 678876542 2221111 2 1235799999986 99999
Q ss_pred EccCCC
Q 016620 242 LHPVLD 247 (386)
Q Consensus 242 l~lPlt 247 (386)
+++|..
T Consensus 70 i~tp~~ 75 (387)
T 3moi_A 70 IASPHQ 75 (387)
T ss_dssp ECSCGG
T ss_pred EcCCcH
Confidence 999953
No 277
>4a8p_A Putrescine carbamoyltransferase; ornithine agmatine deiminase route; HET: PAO; 2.00A {Enterococcus faecalis} PDB: 4a8h_A* 3txx_A
Probab=96.12 E-value=0.67 Score=44.85 Aligned_cols=105 Identities=11% Similarity=0.145 Sum_probs=63.0
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-...+.+.+...+..+..| ..+....+++ .++++|+|
T Consensus 150 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~p~~~~~~~~~~~a~~~G---~~v~~~~d~~-av~~aDVV 224 (355)
T 4a8p_A 150 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSG---GSFLVTDDAS-SVEGADFL 224 (355)
T ss_dssp CGGGCEEEEESCCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHS---CEEEEECCGG-GGTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcC---CeEEEECCHH-HHcCCCEE
Confidence 588999999986 67888888876 579999999987532111111110000001111 1233457888 99999999
Q ss_pred EEccCC----C----hhh------hhcccHHHHhcCCCCcEEEEc
Q 016620 241 SLHPVL----D----KTT------YHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 241 vl~lPl----t----~~t------~~li~~~~~~~mk~gailIN~ 271 (386)
..-+-. . .+- ..-++.+.++.+|++++|.-+
T Consensus 225 ytd~w~smgq~~~~~~er~~~~~~~y~vt~ell~~ak~dai~MHc 269 (355)
T 4a8p_A 225 YTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHC 269 (355)
T ss_dssp EECCSSEETTEECCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEEC
T ss_pred EecccccCcchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECC
Confidence 874311 0 110 134577777777777777665
No 278
>4a8t_A Putrescine carbamoyltransferase; trabnsferase PALO, delta-N-(phosphonoacetyl)-L- ornithine, agmatine deiminase route, agmatine catabolism; HET: PAO PGE; 1.59A {Enterococcus faecalis}
Probab=96.11 E-value=0.5 Score=45.45 Aligned_cols=105 Identities=11% Similarity=0.142 Sum_probs=62.0
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEE
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiV 240 (386)
.+.|.+|+++|= +++..+.+..+ ..||++|.+..|..-...+.+.+...+..+..+ ..+....+++ .++++|+|
T Consensus 172 ~l~glkva~vGD~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~-av~~aDvv 246 (339)
T 4a8t_A 172 KLEDCKVVFVGDATQVCFSLGLIT-TKMGMNFVHFGPEGFQLNEEHQAKLAKNCEVSG---GSFLVTDDAS-SVEGADFL 246 (339)
T ss_dssp CGGGCEEEEESSCCHHHHHHHHHH-HHTTCEEEEECCTTSSCCHHHHHHHHHHHHHHC---CEEEEECCGG-GGTTCSEE
T ss_pred CCCCCEEEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CEEEEECChh-HHcCCCEE
Confidence 589999999986 67788888876 579999999987532111111110000001111 1233457888 99999999
Q ss_pred EEccCC----Chh---h-------hhcccHHHHhcCCCCcEEEEc
Q 016620 241 SLHPVL----DKT---T-------YHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 241 vl~lPl----t~~---t-------~~li~~~~~~~mk~gailIN~ 271 (386)
..-+-. ..+ . ..-++.+.++++|++++|.-+
T Consensus 247 ytd~w~smg~~~~~~~er~~~~~~~y~vt~ell~~ak~dai~mHc 291 (339)
T 4a8t_A 247 YTDVWYGLYEAELSEEERMKVFYPKYQVNQEMMDRAGANCKFMHC 291 (339)
T ss_dssp EECCSSCCTTSCCCHHHHHHHHTTTTCBCHHHHHHHCTTCEEEEC
T ss_pred EecCcccCCchhhhhHHHHHHhccccccCHHHHHhcCCCcEEECC
Confidence 974311 010 0 133566677777777776655
No 279
>3gdo_A Uncharacterized oxidoreductase YVAA; structural genomics, putative oxidoreductase YVAA, oxidoredu PSI-2, protein structure initiative; 2.03A {Bacillus subtilis subsp} PDB: 3gfg_A
Probab=96.10 E-value=0.0077 Score=58.37 Aligned_cols=68 Identities=10% Similarity=0.125 Sum_probs=47.0
Q ss_pred CeEEEEecChhHHH-HHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEE
Q 016620 166 QTVGVIGAGRIGSA-YARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~~-iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVv 241 (386)
.+|||||+|.||+. .++.+.+.-+++|. ++|++....... + + ....+.+++++++ +.|+|+
T Consensus 6 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~----~-------~----~~~~~~~~~~ll~~~~vD~V~ 70 (358)
T 3gdo_A 6 IKVGILGYGLSGSVFHGPLLDVLDEYQISKIMTSRTEEVKRD----F-------P----DAEVVHELEEITNDPAIELVI 70 (358)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECSCHHHHHHH----C-------T----TSEEESSTHHHHTCTTCCEEE
T ss_pred ceEEEEccCHHHHHHHHHHHhhCCCeEEEEEEcCCHHHHHhh----C-------C----CCceECCHHHHhcCCCCCEEE
Confidence 47999999999997 67766323378865 668876431111 1 1 1224578999998 789999
Q ss_pred EccCCCh
Q 016620 242 LHPVLDK 248 (386)
Q Consensus 242 l~lPlt~ 248 (386)
+|+|...
T Consensus 71 i~tp~~~ 77 (358)
T 3gdo_A 71 VTTPSGL 77 (358)
T ss_dssp ECSCTTT
T ss_pred EcCCcHH
Confidence 9999643
No 280
>3d0o_A L-LDH 1, L-lactate dehydrogenase 1; cytoplasm, glycolysis, NAD, oxidoreductase, phosphoprotein; 1.80A {Staphylococcus aureus} PDB: 3d4p_A* 3h3j_A*
Probab=96.04 E-value=0.027 Score=53.82 Aligned_cols=105 Identities=20% Similarity=0.243 Sum_probs=59.4
Q ss_pred CCeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.++|+|+|.|.+|.++|..|+. ++.-+|..+|...........+.-+. . .....+.... . +..+.++.||+|+++
T Consensus 6 ~~KI~IIGaG~vG~~la~~l~~~~~~~ei~L~Di~~~~~~g~~~dl~~~-~-~~~~~~~~v~-~-~~~~a~~~aDvVvi~ 81 (317)
T 3d0o_A 6 GNKVVLIGNGAVGSSYAFSLVNQSIVDELVIIDLDTEKVRGDVMDLKHA-T-PYSPTTVRVK-A-GEYSDCHDADLVVIC 81 (317)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSCSEEEEECSCHHHHHHHHHHHHHH-G-GGSSSCCEEE-E-CCGGGGTTCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHhhhhhhhHHhh-h-hhcCCCeEEE-e-CCHHHhCCCCEEEEC
Confidence 4689999999999999987753 23348999998753221111111000 0 0000111222 1 346778999999999
Q ss_pred cCCChh---hh--------hccc--HHHHhcCCCCcEEEEcCC
Q 016620 244 PVLDKT---TY--------HLIN--KERLATMKKEAILVNCSR 273 (386)
Q Consensus 244 lPlt~~---t~--------~li~--~~~~~~mk~gailIN~aR 273 (386)
.+.... ++ .++. .+.+....|++++++++-
T Consensus 82 ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~tN 124 (317)
T 3d0o_A 82 AGAAQKPGETRLDLVSKNLKIFKSIVGEVMASKFDGIFLVATN 124 (317)
T ss_dssp CCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 865321 11 1110 012333478999999763
No 281
>3dty_A Oxidoreductase, GFO/IDH/MOCA family; MGCL2, tetramer, PSI-2, 11131, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Pseudomonas syringae PV}
Probab=96.04 E-value=0.018 Score=56.50 Aligned_cols=73 Identities=12% Similarity=0.146 Sum_probs=49.3
Q ss_pred CCeEEEEecCh---hHHHHHHHHHhcCCcEEE--EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh---
Q 016620 165 GQTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--- 236 (386)
Q Consensus 165 g~~vgIvG~G~---IG~~iA~~L~~~fg~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--- 236 (386)
-.+|||||+|. ||+..+..++..-++++. ++|++.... +.+.+. .+... ...+.+++++++.
T Consensus 12 ~~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~-------~g~~~--~~~~~~~~~ll~~~~~ 81 (398)
T 3dty_A 12 PIRWAMVGGGSQSQIGYIHRCAALRDNTFVLVAGAFDIDPIRG-SAFGEQ-------LGVDS--ERCYADYLSMFEQEAR 81 (398)
T ss_dssp CEEEEEEECCTTCSSHHHHHHHHHGGGSEEEEEEECCSSHHHH-HHHHHH-------TTCCG--GGBCSSHHHHHHHHTT
T ss_pred cceEEEEcCCccchhHHHHHHHHhhCCCeEEEEEEeCCCHHHH-HHHHHH-------hCCCc--ceeeCCHHHHHhcccc
Confidence 35799999999 999988876433347776 468876542 222211 12211 1245799999986
Q ss_pred ----CCEEEEccCCC
Q 016620 237 ----ADVISLHPVLD 247 (386)
Q Consensus 237 ----aDiVvl~lPlt 247 (386)
.|+|++|+|..
T Consensus 82 ~~~~vD~V~i~tp~~ 96 (398)
T 3dty_A 82 RADGIQAVSIATPNG 96 (398)
T ss_dssp CTTCCSEEEEESCGG
T ss_pred cCCCCCEEEECCCcH
Confidence 89999999953
No 282
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=96.04 E-value=0.013 Score=54.13 Aligned_cols=81 Identities=16% Similarity=0.146 Sum_probs=51.8
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
.+|+|+|+|.||+.+++.+. ..+-++.+ +|+..... .+.....++++++ ++|+|+-+.
T Consensus 4 mkI~ViGaGrMG~~i~~~l~-~~~~eLva~~d~~~~~~-------------------~gv~v~~dl~~l~-~~DVvIDft 62 (243)
T 3qy9_A 4 MKILLIGYGAMNQRVARLAE-EKGHEIVGVIENTPKAT-------------------TPYQQYQHIADVK-GADVAIDFS 62 (243)
T ss_dssp CEEEEECCSHHHHHHHHHHH-HTTCEEEEEECSSCC---------------------CCSCBCSCTTTCT-TCSEEEECS
T ss_pred eEEEEECcCHHHHHHHHHHH-hCCCEEEEEEecCcccc-------------------CCCceeCCHHHHh-CCCEEEEeC
Confidence 57999999999999999874 44336554 78764320 1122346788888 999988554
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
.- ..+.. .+. ++.|.-+|....|
T Consensus 63 ~p-~a~~~-----~~~-l~~g~~vVigTTG 85 (243)
T 3qy9_A 63 NP-NLLFP-----LLD-EDFHLPLVVATTG 85 (243)
T ss_dssp CH-HHHHH-----HHT-SCCCCCEEECCCS
T ss_pred Ch-HHHHH-----HHH-HhcCCceEeCCCC
Confidence 31 12222 233 7777767766666
No 283
>1u8f_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase, liver; rossmann fold, oxidoreductase, mammalian GAPDH; HET: NAD; 1.75A {Homo sapiens} SCOP: c.2.1.3 d.81.1.1 PDB: 1znq_O* 1j0x_O* 3gpd_R* 1dss_G* 1crw_G* 1szj_G* 1ihx_A* 1ihy_A* 1gpd_G* 4gpd_1
Probab=96.04 E-value=0.012 Score=56.84 Aligned_cols=104 Identities=18% Similarity=0.141 Sum_probs=55.1
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcCC-hhhHHHHHHhhhhhhhhhcC-C------------CCccccccCCHH
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY-QATRLEKFVTAYGQFLKANG-E------------QPVTWKRASSMD 231 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~-~~~~~~~~~~~~~~~~~~~~-~------------~~~~~~~~~~l~ 231 (386)
.+|||+|+|.||+.+++.|...-+++|.+.... .......+...|++...... . .........+++
T Consensus 4 ikVgI~G~G~iGr~~~R~l~~~~~vevvaI~d~~~~~~~~a~l~~~ds~~g~~~~~~~~~~~~l~v~g~~i~v~~~~d~~ 83 (335)
T 1u8f_O 4 VKVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMFQYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS 83 (335)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHHHCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred eEEEEEccCHHHHHHHHHHHcCCCcEEEEecCCCCCHHHHHHHhhcccccCCCCCceEEcCCeEEECCeEEEEEecCCHH
Confidence 379999999999999998754456887766431 22211112111211100000 0 000011123555
Q ss_pred HH-h--hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 232 EV-L--READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 232 el-l--~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
++ + ..+|+|+.|+|.... . +..-..++.|+..|.++-.
T Consensus 84 ~l~~~~~~vDvV~eatg~~~~-~----e~a~~~l~aGak~V~iSap 124 (335)
T 1u8f_O 84 KIKWGDAGAEYVVESTGVFTT-M----EKAGAHLQGGAKRVIISAP 124 (335)
T ss_dssp GCCTTTTTCCEEEECSSSCCS-H----HHHGGGGGGTCSEEEESSC
T ss_pred HCccccCCCCEEEECCCchhh-H----HHHHHHHhCCCeEEEeccC
Confidence 55 2 579999999996432 1 2223445678666666544
No 284
>4h31_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: PE5; 1.70A {Vibrio vulnificus} PDB: 3upd_A*
Probab=96.02 E-value=0.5 Score=45.84 Aligned_cols=107 Identities=13% Similarity=0.134 Sum_probs=66.0
Q ss_pred cccCCCeEEEEecC--hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 161 NLLKGQTVGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 161 ~~l~g~~vgIvG~G--~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
..+.|.+|+++|=| ++..+.+..+ ..||++|.+..|..-...+.+.+...+.....+ ..+....+++|.++++|
T Consensus 177 ~~l~gl~ia~vGD~~~~va~S~~~~~-~~~g~~v~~~~P~~~~p~~~~~~~~~~~~~~~g---~~v~~~~d~~eav~~aD 252 (358)
T 4h31_A 177 KALADIQFAYLGDARNNVGNSLMVGA-AKMGMDIRLVGPQAYWPDEELVAACQAIAKQTG---GKITLTENVAEGVQGCD 252 (358)
T ss_dssp CCGGGCEEEEESCTTSHHHHHHHHHH-HHHTCEEEEESCGGGSCCHHHHHHHHHHHHHHT---CEEEEESCHHHHHTTCS
T ss_pred CCcCceEEEecCCCCcccchHHHHHH-HhcCceEEEeCCcccCCCHHHHHHHHHHHHHcC---CcceeccCHHHHhccCc
Confidence 46899999999954 7999999886 579999999987532111111110000011111 22334578999999999
Q ss_pred EEEEccCCC----hhh---------hhcccHHHHhc-CCCCcEEEEc
Q 016620 239 VISLHPVLD----KTT---------YHLINKERLAT-MKKEAILVNC 271 (386)
Q Consensus 239 iVvl~lPlt----~~t---------~~li~~~~~~~-mk~gailIN~ 271 (386)
+|..-.-.. ++. ..-++.+.+++ .|++++|.-+
T Consensus 253 vvyt~~w~s~~~~~~~~~~~~~~~~~y~v~~~~l~~~ak~~~i~mH~ 299 (358)
T 4h31_A 253 FLYTDVWVSMGESPEAWDERVALMKPYQVNMNVLKQTGNPNVKFMHC 299 (358)
T ss_dssp EEEECCSSCTTSCTTHHHHHHHHHGGGCBCHHHHHHTTCTTCEEEEC
T ss_pred EEEEEEEEEcccCchhHHHHHHHHhCcccCHHHHHhcCCCCcEEECC
Confidence 998644321 111 12367777775 4678887765
No 285
>1ml4_A Aspartate transcarbamoylase; beta pleated sheet, protein inhibitor complex, transferase; HET: PAL; 1.80A {Pyrococcus abyssi} SCOP: c.78.1.1 c.78.1.1
Probab=96.00 E-value=0.13 Score=48.86 Aligned_cols=102 Identities=17% Similarity=0.278 Sum_probs=64.3
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCC
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREAD 238 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aD 238 (386)
.+.|.+|+++|= |++..+.+..+ ..||++|.+..|..-...+...+ ..+..| ..+....+++|+++++|
T Consensus 152 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~----~~~~~g---~~~~~~~d~~eav~~aD 223 (308)
T 1ml4_A 152 RIDGLKIGLLGDLKYGRTVHSLAEAL-TFYDVELYLISPELLRMPRHIVE----ELREKG---MKVVETTTLEDVIGKLD 223 (308)
T ss_dssp CSSSEEEEEESCTTTCHHHHHHHHHG-GGSCEEEEEECCGGGCCCHHHHH----HHHHTT---CCEEEESCTHHHHTTCS
T ss_pred CCCCeEEEEeCCCCcCchHHHHHHHH-HHCCCEEEEECCccccCCHHHHH----HHHHcC---CeEEEEcCHHHHhcCCC
Confidence 488999999998 48999999986 57999999998754321111111 111222 12333478999999999
Q ss_pred EEEEccCCChh-----h------hhcccHHHHhcCCCCcEEEEc
Q 016620 239 VISLHPVLDKT-----T------YHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 239 iVvl~lPlt~~-----t------~~li~~~~~~~mk~gailIN~ 271 (386)
+|..-.-..+. . ..-++.+.++.+|++++|.-+
T Consensus 224 vvyt~~~q~er~~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~ 267 (308)
T 1ml4_A 224 VLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHP 267 (308)
T ss_dssp EEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECC
T ss_pred EEEECCccccccCCHHHHHHHhcCcccCHHHHhhcCCCCEEECC
Confidence 99886543211 0 123455566666666655544
No 286
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=96.00 E-value=0.0088 Score=60.21 Aligned_cols=42 Identities=17% Similarity=0.235 Sum_probs=36.7
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHH
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRL 203 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~ 203 (386)
.+++|++|.|+|.|.+|...++.| ...|++|.++|+......
T Consensus 8 ~~l~~~~vlVvGgG~va~~k~~~L-~~~ga~V~vi~~~~~~~~ 49 (457)
T 1pjq_A 8 CQLRDRDCLIVGGGDVAERKARLL-LEAGARLTVNALTFIPQF 49 (457)
T ss_dssp ECCBTCEEEEECCSHHHHHHHHHH-HHTTBEEEEEESSCCHHH
T ss_pred EECCCCEEEEECCCHHHHHHHHHH-HhCcCEEEEEcCCCCHHH
Confidence 468999999999999999999998 579999999998765543
No 287
>3aog_A Glutamate dehydrogenase; NAD(H), oxidoreducta; HET: GLU; 2.10A {Thermus thermophilus HB27} PDB: 3aoe_A
Probab=96.00 E-value=0.05 Score=54.31 Aligned_cols=117 Identities=16% Similarity=0.257 Sum_probs=71.0
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCC---------hhhHHHHHHhhhhhhhhhcCCCCccccccCCH
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (386)
.++.|++|.|.|+|++|+.+|+.| ...|++|+ +.|.+ ....+.++.+... ...........+.
T Consensus 231 ~~l~g~~vaVqGfGnVG~~~a~~L-~e~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~g------~i~~y~~a~~i~~ 303 (440)
T 3aog_A 231 LQVEGARVAIQGFGNVGNAAARAF-HDHGARVVAVQDHTGTVYNEAGIDPYDLLRHVQEFG------GVRGYPKAEPLPA 303 (440)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHTS------SSTTCTTSEECCH
T ss_pred CCccCCEEEEeccCHHHHHHHHHH-HHCCCEEEEEEcCCcEEECCCCCCHHHHHHHHHhcC------CcccCCCceEcCc
Confidence 468999999999999999999998 57899998 44442 1122222111110 0000000112345
Q ss_pred HHHh-hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 231 DEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 231 ~ell-~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
++++ ..||+++-|.. .+.|+.+....++ ..+++-.+-+.+- .++ .+.|.+..+.
T Consensus 304 ~ei~~~~~DIlvPcA~-----~n~i~~~na~~l~-ak~VvEgAN~p~t-~eA-~~iL~~~GI~ 358 (440)
T 3aog_A 304 ADFWGLPVEFLVPAAL-----EKQITEQNAWRIR-ARIVAEGANGPTT-PAA-DDILLEKGVL 358 (440)
T ss_dssp HHHTTCCCSEEEECSS-----SSCBCTTTGGGCC-CSEEECCSSSCBC-HHH-HHHHHHHTCE
T ss_pred hhhhcCCCcEEEecCC-----cCccchhhHHHcC-CcEEEecCccccC-HHH-HHHHHHCCCE
Confidence 6665 47999998875 4456666666663 5688888888874 333 3455554443
No 288
>3i23_A Oxidoreductase, GFO/IDH/MOCA family; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Enterococcus faecalis} PDB: 3fd8_A* 3hnp_A
Probab=96.00 E-value=0.021 Score=54.98 Aligned_cols=70 Identities=16% Similarity=0.276 Sum_probs=45.4
Q ss_pred CeEEEEecChhHH-HHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEEE
Q 016620 166 QTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVIS 241 (386)
Q Consensus 166 ~~vgIvG~G~IG~-~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiVv 241 (386)
.+|||||+|.||+ ..+..+++.-+++|. ++|++... .+.+.+ +.. +...+.++++++.. .|+|+
T Consensus 3 ~rvgiiG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~---~~a~~~-------~~~--~~~~~~~~~~ll~~~~~D~V~ 70 (349)
T 3i23_A 3 VKMGFIGFGKSANRYHLPYVMIRETLEVKTIFDLHVNE---KAAAPF-------KEK--GVNFTADLNELLTDPEIELIT 70 (349)
T ss_dssp EEEEEECCSHHHHHTTHHHHTTCTTEEEEEEECTTCCH---HHHHHH-------HTT--TCEEESCTHHHHSCTTCCEEE
T ss_pred eEEEEEccCHHHHHHHHHHHhhCCCeEEEEEECCCHHH---HHHHhh-------CCC--CCeEECCHHHHhcCCCCCEEE
Confidence 3799999999999 566666333378875 67876222 111111 001 12245789999986 89999
Q ss_pred EccCCC
Q 016620 242 LHPVLD 247 (386)
Q Consensus 242 l~lPlt 247 (386)
+|+|..
T Consensus 71 i~tp~~ 76 (349)
T 3i23_A 71 ICTPAH 76 (349)
T ss_dssp ECSCGG
T ss_pred EeCCcH
Confidence 999953
No 289
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=96.00 E-value=0.016 Score=54.64 Aligned_cols=105 Identities=10% Similarity=0.092 Sum_probs=65.0
Q ss_pred CCeEEEEec-ChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEE
Q 016620 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (386)
Q Consensus 165 g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (386)
..+|+|+|+ |.+|+.+++.+ +..|.+++ .+||.... ....+...+.+++|+.. ..|++
T Consensus 7 ~~rVaViG~sG~~G~~~~~~l-~~~g~~~V~~V~p~~~g-----------------~~~~G~~vy~sl~el~~~~~~D~v 68 (288)
T 2nu8_A 7 NTKVICQGFTGSQGTFHSEQA-IAYGTKMVGGVTPGKGG-----------------TTHLGLPVFNTVREAVAATGATAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHHCCCEE
T ss_pred CCEEEEECCCChHHHHHHHHH-HHCCCeEEEEeCCCccc-----------------ceeCCeeccCCHHHHhhcCCCCEE
Confidence 457999999 99999999987 45678743 56664210 00011223578999988 89999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc-ccCHHHHHHHHHcCCc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP-VIDEVALVEHLKQNPM 291 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~-~vde~aL~~aL~~g~i 291 (386)
++++|.. .....+ .+.++ .... .+|..+.|- .-+.+.|.++.++..+
T Consensus 69 iI~tP~~-~~~~~~-~ea~~-~Gi~-~iVi~t~G~~~~~~~~l~~~A~~~gv 116 (288)
T 2nu8_A 69 VIYVPAP-FCKDSI-LEAID-AGIK-LIITITEGIPTLDMLTVKVKLDEAGV 116 (288)
T ss_dssp EECCCGG-GHHHHH-HHHHH-TTCS-EEEECCCCCCHHHHHHHHHHHHHHTC
T ss_pred EEecCHH-HHHHHH-HHHHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 9999952 223332 33333 2222 344455543 3345588888887544
No 290
>2vt3_A REX, redox-sensing transcriptional repressor REX; transcriptional regulation, redox poise; HET: ATP; 2.0A {Bacillus subtilis} PDB: 2vt2_A*
Probab=95.99 E-value=0.005 Score=55.75 Aligned_cols=68 Identities=15% Similarity=0.248 Sum_probs=42.4
Q ss_pred CeEEEEecChhHHHHHHH-HHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARM-MVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~-L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.+|+|+|.|.+|+.+++. .....|+++. ++|.++...- .. .....+....++++++++.|+|++|
T Consensus 86 ~rV~IIGAG~~G~~La~~~~~~~~g~~iVg~~D~dp~k~g-----------~~--i~gv~V~~~~dl~eli~~~D~ViIA 152 (215)
T 2vt3_A 86 TDVILIGVGNLGTAFLHYNFTKNNNTKISMAFDINESKIG-----------TE--VGGVPVYNLDDLEQHVKDESVAILT 152 (215)
T ss_dssp -CEEEECCSHHHHHHHHCC------CCEEEEEESCTTTTT-----------CE--ETTEEEEEGGGHHHHCSSCCEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHhcccCCcEEEEEEeCCHHHHH-----------hH--hcCCeeechhhHHHHHHhCCEEEEe
Confidence 469999999999999993 2235577765 5676654310 00 1112223356789998777999999
Q ss_pred cCC
Q 016620 244 PVL 246 (386)
Q Consensus 244 lPl 246 (386)
+|.
T Consensus 153 vPs 155 (215)
T 2vt3_A 153 VPA 155 (215)
T ss_dssp SCH
T ss_pred cCc
Confidence 994
No 291
>1y6j_A L-lactate dehydrogenase; southeast collaboratory for structural genomics, secsg, protein struc initiative, PSI, oxidoreductase; 3.01A {Clostridium thermocellum} SCOP: c.2.1.5 d.162.1.1
Probab=95.99 E-value=0.014 Score=55.88 Aligned_cols=74 Identities=19% Similarity=0.283 Sum_probs=44.5
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCC--CCccccccCCHHHHhhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGE--QPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~ell~~aDiV 240 (386)
.++|+|+|.|.+|.++|..|+ ..|. +|..+|...........+ +..... ...... ..+ .+.+++||+|
T Consensus 7 ~~KI~IiGaG~vG~~~a~~l~-~~~~~~ev~L~Di~~~~~~g~~~d-----l~~~~~~~~~~~i~-~~~-~~a~~~aDvV 78 (318)
T 1y6j_A 7 RSKVAIIGAGFVGASAAFTMA-LRQTANELVLIDVFKEKAIGEAMD-----INHGLPFMGQMSLY-AGD-YSDVKDCDVI 78 (318)
T ss_dssp CCCEEEECCSHHHHHHHHHHH-HTTCSSEEEEECCC---CCHHHHH-----HTTSCCCTTCEEEC---C-GGGGTTCSEE
T ss_pred CCEEEEECCCHHHHHHHHHHH-hCCCCCEEEEEeCChHHHHHHHHH-----HHHhHHhcCCeEEE-ECC-HHHhCCCCEE
Confidence 358999999999999998875 4455 899999875321110111 111110 111111 223 5668999999
Q ss_pred EEccCC
Q 016620 241 SLHPVL 246 (386)
Q Consensus 241 vl~lPl 246 (386)
+++.+.
T Consensus 79 ii~~g~ 84 (318)
T 1y6j_A 79 VVTAGA 84 (318)
T ss_dssp EECCCC
T ss_pred EEcCCC
Confidence 999875
No 292
>3nv9_A Malic enzyme; rossmann fold, oxidoreductase; 2.25A {Entamoeba histolytica}
Probab=95.99 E-value=0.098 Score=52.25 Aligned_cols=173 Identities=17% Similarity=0.176 Sum_probs=109.5
Q ss_pred CCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhc
Q 016620 108 YGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEG 187 (386)
Q Consensus 108 ~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~ 187 (386)
..|++.|..- +.+|=-+++-+|+.+|- .|+.+...+|.|.|.|.-|-.+|+.| ..
T Consensus 186 ~~ipvFnDD~---qGTA~V~lAgllnAlki---------------------~gk~l~d~riV~~GAGaAGigia~ll-~~ 240 (487)
T 3nv9_A 186 CDIPVWHDDQ---QGTASVTLAGLLNALKL---------------------VKKDIHECRMVFIGAGSSNTTCLRLI-VT 240 (487)
T ss_dssp CSSCEEETTT---HHHHHHHHHHHHHHHHH---------------------HTCCGGGCCEEEECCSHHHHHHHHHH-HH
T ss_pred ccCCcccccc---chHHHHHHHHHHHHHHH---------------------hCCChhhcEEEEECCCHHHHHHHHHH-HH
Confidence 3799999864 55677788888888882 23678999999999999999999998 57
Q ss_pred CCc---EEEEEcCCh-----hhHHHHHH-hhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChhhhhcccHHH
Q 016620 188 FKM---NLIYYDLYQ-----ATRLEKFV-TAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKTTYHLINKER 258 (386)
Q Consensus 188 fg~---~V~~~d~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~ 258 (386)
.|. +++.+|+.. +..+..+. ..+...+..... + ....+|.|+++.+|+++-+--. ..+.++++.
T Consensus 241 ~G~~~~~i~l~D~~Gli~~~R~~l~~~~~~~~k~~~A~~~n-~---~~~~~L~eav~~adVlIG~S~~---~pg~ft~e~ 313 (487)
T 3nv9_A 241 AGADPKKIVMFDSKGSLHNGREDIKKDTRFYRKWEICETTN-P---SKFGSIAEACVGADVLISLSTP---GPGVVKAEW 313 (487)
T ss_dssp TTCCGGGEEEEETTEECCTTCHHHHHCGGGHHHHHHHHHSC-T---TCCCSHHHHHTTCSEEEECCCS---SCCCCCHHH
T ss_pred cCCCcccEEEEeccccccCCcchhhhhcccHHHHHHHHhcc-c---ccCCCHHHHHhcCCEEEEeccc---CCCCCCHHH
Confidence 888 799999752 11111100 000000111000 0 0235899999999987755411 147899999
Q ss_pred HhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEeeccCCCCCCCCCCCCCCCeEEcCCCC
Q 016620 259 LATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGLDVFEDEPYMKPGLSEMKNAIVVPHIA 322 (386)
Q Consensus 259 ~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaalDV~~~EP~~~~~L~~~~nvilTPHia 322 (386)
++.|.+..++.=.|.... |-.=.+|.+.|+..-| . ..-+.| =+..|+++-|-++
T Consensus 314 V~~Ma~~PIIFaLSNPtp--Ei~pe~A~~~G~aIvA--T--Grsd~P----nQ~NN~liFPGI~ 367 (487)
T 3nv9_A 314 IKSMGEKPIVFCCANPVP--EIYPYEAKEAGAYIVA--T--GRGDFP----NQVNNSVGFPGIL 367 (487)
T ss_dssp HHTSCSSCEEEECCSSSC--SSCHHHHHHTTCSEEE--E--SCTTSS----SBCCGGGTHHHHH
T ss_pred HHhhcCCCEEEECCCCCc--cCCHHHHHHhCCEEEE--E--CCCCCc----ccCcceeEcchhh
Confidence 999999999998887654 2112223335542111 1 111111 2566888888654
No 293
>3tpf_A Otcase, ornithine carbamoyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, rossman fold; 2.70A {Campylobacter jejuni subsp}
Probab=95.99 E-value=0.59 Score=44.36 Aligned_cols=113 Identities=14% Similarity=0.155 Sum_probs=69.4
Q ss_pred ccC-CCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 162 LLK-GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 162 ~l~-g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.+. |.+|+++|= +++..+.+..+ ..||++|.+..|..-...+.+.+...+..+..| ..+....+++|.++++|+
T Consensus 142 ~l~~gl~va~vGD~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~g---~~~~~~~d~~eav~~aDv 217 (307)
T 3tpf_A 142 MQNGIAKVAFIGDSNNMCNSWLITA-AILGFEISIAMPKNYKISPEIWEFAMKQALISG---AKISLGYDKFEALKDKDV 217 (307)
T ss_dssp CGGGCCEEEEESCSSHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHT---CEEEEESCHHHHHTTCSE
T ss_pred CCCCCCEEEEEcCCCccHHHHHHHH-HHcCCEEEEECCCccCCCHHHHHHHHHHHHHcC---CeEEEEcCHHHHhcCCCE
Confidence 377 999999996 56777787776 478999999987532111111110000000111 223345799999999999
Q ss_pred EEEccCCC--h--h--------hhhcccHHHHhcCCCCcEEEEcC---CCcccC
Q 016620 240 ISLHPVLD--K--T--------TYHLINKERLATMKKEAILVNCS---RGPVID 278 (386)
Q Consensus 240 Vvl~lPlt--~--~--------t~~li~~~~~~~mk~gailIN~a---Rg~~vd 278 (386)
|..-.-.. . + ...-++.+.++.+|++++|.-+. ||.=|+
T Consensus 218 vyt~~w~smg~e~~~~~~~~~~~~y~v~~e~l~~a~~~ai~mH~lPa~Rg~EI~ 271 (307)
T 3tpf_A 218 VITDTWVSMGEENEKERKIKEFEGFMIDEKAMSVANKDAILLHCLPAYRGYEVS 271 (307)
T ss_dssp EEECCSSCTTGGGGHHHHHHHTGGGCBCHHHHHHSCTTCEEEECSCCCBTTTBC
T ss_pred EEecCcccCCchhhHHHHHHHhcccccCHHHHHhcCCCcEEECCCCCCCCceeC
Confidence 98765211 0 1 12346888888889888887764 554443
No 294
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=95.96 E-value=0.013 Score=52.69 Aligned_cols=76 Identities=14% Similarity=0.157 Sum_probs=50.5
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCC-CCcc-ccccCCHHHHhhhC
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGE-QPVT-WKRASSMDEVLREA 237 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~l~ell~~a 237 (386)
..+.|++|.|.|. |.||+.+++.|+ .-|.+|++.+|+...... +...+. .... ... .++.+.+..+
T Consensus 17 ~~l~~~~ilVtGatG~iG~~l~~~L~-~~G~~V~~~~R~~~~~~~---------~~~~~~~~~~~~Dl~-~~~~~~~~~~ 85 (236)
T 3e8x_A 17 LYFQGMRVLVVGANGKVARYLLSELK-NKGHEPVAMVRNEEQGPE---------LRERGASDIVVANLE-EDFSHAFASI 85 (236)
T ss_dssp ----CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSGGGHHH---------HHHTTCSEEEECCTT-SCCGGGGTTC
T ss_pred cCcCCCeEEEECCCChHHHHHHHHHH-hCCCeEEEEECChHHHHH---------HHhCCCceEEEcccH-HHHHHHHcCC
Confidence 5689999999998 999999999984 679999999998754221 111111 0000 001 5667888999
Q ss_pred CEEEEccCCC
Q 016620 238 DVISLHPVLD 247 (386)
Q Consensus 238 DiVvl~lPlt 247 (386)
|+|+.+....
T Consensus 86 D~vi~~ag~~ 95 (236)
T 3e8x_A 86 DAVVFAAGSG 95 (236)
T ss_dssp SEEEECCCCC
T ss_pred CEEEECCCCC
Confidence 9999888754
No 295
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=95.96 E-value=0.021 Score=53.55 Aligned_cols=40 Identities=25% Similarity=0.244 Sum_probs=34.4
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
..+.||++.|.|. |.||+++|+.|+ ..|++|++.+++...
T Consensus 43 ~~l~gk~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~~~ 83 (291)
T 3ijr_A 43 EKLKGKNVLITGGDSGIGRAVSIAFA-KEGANIAIAYLDEEG 83 (291)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchH
Confidence 4689999999987 889999999985 679999999887653
No 296
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=95.94 E-value=0.023 Score=56.72 Aligned_cols=87 Identities=13% Similarity=0.202 Sum_probs=64.0
Q ss_pred ccCCCeEEEEecC----------hhHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCH
Q 016620 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (386)
Q Consensus 162 ~l~g~~vgIvG~G----------~IG~~iA~~L~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (386)
.+.|++|+|+|+- +-...+++.| ... |++|.+|||..... ....++
T Consensus 312 ~~~~~~v~vlGlafK~~tdD~ReSpa~~i~~~L-~~~~g~~V~~~DP~~~~~----------------------~~~~~~ 368 (431)
T 3ojo_A 312 ALSGNKVTVFGLTYKGDVDDIRESPAFDIYELL-NQEPDIEVCAYDPHVELD----------------------FVEHDM 368 (431)
T ss_dssp HSSCCEEEEECCCSSTTSCCCTTCHHHHHHHHH-HHSTTCEEEEECSSCCCT----------------------TBCSTT
T ss_pred hcCCCEEEEEeeeeCCCCcchhcChHHHHHHHH-HhhcCCEEEEECCCcccc----------------------cccCCH
Confidence 4789999999984 4578899988 577 99999999976431 124578
Q ss_pred HHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 231 ~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
++.++.||.|+++++- ++-+. ++.+.++.|+ +.+++|. |+-
T Consensus 369 ~~~~~~ad~vvi~t~~-~~f~~-~d~~~~~~~~-~~~i~D~-r~~ 409 (431)
T 3ojo_A 369 SHAVKDASLVLILSDH-SEFKN-LSDSHFDKMK-HKVIFDT-KNV 409 (431)
T ss_dssp HHHHTTCSEEEECSCC-GGGTS-CCGGGGTTCS-SCEEEES-SCC
T ss_pred HHHHhCCCEEEEecCC-HHHhc-cCHHHHHhCC-CCEEEEC-CCC
Confidence 8999999999999975 33333 3444556676 6688885 543
No 297
>4ep1_A Otcase, ornithine carbamoyltransferase; structural genomics, niaid, national institute of allergy AN infectious diseases; 3.25A {Bacillus anthracis}
Probab=95.94 E-value=0.18 Score=48.53 Aligned_cols=156 Identities=15% Similarity=0.094 Sum_probs=90.8
Q ss_pred cEEEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCe
Q 016620 88 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQT 167 (386)
Q Consensus 88 k~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~ 167 (386)
..|+.+.-.-..+. ..++..+|+|.|.-+....++ .+++=++.+.+++ | .+.|.+
T Consensus 127 D~IviR~~~~~~~~-~lA~~~~vPVINag~~~~HPt--QaLaDl~TI~E~~---------------------G-~l~glk 181 (340)
T 4ep1_A 127 DGIMIRTFSHADVE-ELAKESSIPVINGLTDDHHPC--QALADLMTIYEET---------------------N-TFKGIK 181 (340)
T ss_dssp SEEEEECSCHHHHH-HHHHHCSSCEEEEECSSCCHH--HHHHHHHHHHHHH---------------------S-CCTTCE
T ss_pred CEEEEecCChhHHH-HHHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh---------------------C-CCCCCE
Confidence 56666654433332 334567899999655332221 2333333333321 1 388999
Q ss_pred EEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCC
Q 016620 168 VGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVL 246 (386)
Q Consensus 168 vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPl 246 (386)
|+++|= +++..+.+..+ ..||++|.+..|..-...+.+.+...+..+..| ..+....+++|+++++|+|..-.-.
T Consensus 182 va~vGD~~nva~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~a~~~G---~~v~~~~d~~eav~~aDVvyt~~w~ 257 (340)
T 4ep1_A 182 LAYVGDGNNVCHSLLLAS-AKVGMHMTVATPVGYRPNEEIVKKALAIAKETG---AEIEILHNPELAVNEADFIYTDVWM 257 (340)
T ss_dssp EEEESCCCHHHHHHHHHH-HHHTCEEEEECCTTCCCCHHHHHHHHHHHHHHC---CCEEEESCHHHHHTTCSEEEECCC-
T ss_pred EEEECCCchhHHHHHHHH-HHcCCEEEEECCcccCCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhCCCCEEEecCcc
Confidence 999986 56777888776 478999999887532111111110000001112 1233457899999999999876543
Q ss_pred Ch------h-----hhhcccHHHHhcCCCCcEEEEcC
Q 016620 247 DK------T-----TYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 247 t~------~-----t~~li~~~~~~~mk~gailIN~a 272 (386)
.. + ...-++.+.++.+|++++|.-+.
T Consensus 258 smg~e~~~~~~~~~~~y~vt~ell~~ak~dai~MHcL 294 (340)
T 4ep1_A 258 SMGQEGEEEKYTLFQPYQINKELVKHAKQTYHFLHCL 294 (340)
T ss_dssp -----CHHHHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred CCCCCchHHHHHHhccccCCHHHHHhcCCCcEEECCC
Confidence 21 0 12357888899899999888765
No 298
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=95.91 E-value=0.0097 Score=57.80 Aligned_cols=95 Identities=16% Similarity=0.215 Sum_probs=63.2
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHHhhhCCEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (386)
.|++|.|+|.|.||...++.+ +.+|++|++.+++....... .+..+... .....+ +.++....|+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~--------~~~lGa~~--v~~~~~~~~~~~~~~~~D~v 255 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFA-KAFGSKVTVISTSPSKKEEA--------LKNFGADS--FLVSRDQEQMQAAAGTLDGI 255 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCGGGHHHH--------HHTSCCSE--EEETTCHHHHHHTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHHH--------HHhcCCce--EEeccCHHHHHHhhCCCCEE
Confidence 688999999999999999985 78999999999876542110 01222211 111122 23334468999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
+.++..... -...++.|+++..+|+++..
T Consensus 256 id~~g~~~~-----~~~~~~~l~~~G~iv~~g~~ 284 (366)
T 1yqd_A 256 IDTVSAVHP-----LLPLFGLLKSHGKLILVGAP 284 (366)
T ss_dssp EECCSSCCC-----SHHHHHHEEEEEEEEECCCC
T ss_pred EECCCcHHH-----HHHHHHHHhcCCEEEEEccC
Confidence 998874321 24567788889899998753
No 299
>4amu_A Ornithine carbamoyltransferase, catabolic; ornithine transcarbamoylase, hydrolase; 2.50A {Mycoplasma penetrans} PDB: 4anf_A
Probab=95.91 E-value=0.13 Score=49.95 Aligned_cols=155 Identities=15% Similarity=0.129 Sum_probs=91.3
Q ss_pred cEEEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCe
Q 016620 88 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQT 167 (386)
Q Consensus 88 k~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~ 167 (386)
..|+.++-+-..+. ..++-.+|+|.|.-+....++ .+|+=++.+.+++ | .+.|.+
T Consensus 128 D~IviR~~~~~~~~-~lA~~s~vPVINa~~~~~HPt--QaLaDl~Ti~E~~---------------------G-~l~glk 182 (365)
T 4amu_A 128 DGIEFRGFAQSDVD-ALVKYSGVPVWNGLTDDEHPT--QIIADFMTMKEKF---------------------G-NLKNKK 182 (365)
T ss_dssp SEEEEECSCHHHHH-HHHHHHCSCEEEEECSSCCHH--HHHHHHHHHHHHH---------------------S-SCTTCE
T ss_pred cEEEEecCChhHHH-HHHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHh---------------------C-CCCCCE
Confidence 66777754433332 334556899999755432221 2333333333311 1 388999
Q ss_pred EEEEecC--hhHHHHHHHHHhcCCcEEEEEcCChhhH--HHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 168 VGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQATR--LEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 168 vgIvG~G--~IG~~iA~~L~~~fg~~V~~~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
|+++|=| +++.+.+..+ ..||++|.+..|..-.. .+.+.+...+..+..+ ..+....+++|+++++|+|..-
T Consensus 183 va~vGD~~nnva~Sl~~~~-~~lG~~v~~~~P~~~~p~~~~~~~~~~~~~~~~~g---~~i~~~~d~~eav~~aDVVytd 258 (365)
T 4amu_A 183 IVFIGDYKNNVGVSTMIGA-AFNGMHVVMCGPDNYKNEIDKNVLAKCIELFKRNG---GSLRFSTDKILAAQDADVIYTD 258 (365)
T ss_dssp EEEESSTTSHHHHHHHHHH-HHTTCEEEEESCGGGGGGSCHHHHHHHHHHHHHHS---CEEEEESCHHHHTTTCSEEEEC
T ss_pred EEEECCCCcchHHHHHHHH-HHcCCEEEEECCccccCCCcHHHHHHHHHHHHHcC---CEEEEECCHHHHhcCCCEEEec
Confidence 9999987 7888888886 47999999998753221 1111110000011111 1233457999999999999874
Q ss_pred cC----CChh---h------hhcccHHHHhcCCCCcEEEEc
Q 016620 244 PV----LDKT---T------YHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 244 lP----lt~~---t------~~li~~~~~~~mk~gailIN~ 271 (386)
+- ...+ . ..-++.+.++.+|++++|.-+
T Consensus 259 ~W~smg~~~~~~~er~~~~~~y~vt~ell~~a~~dai~MHc 299 (365)
T 4amu_A 259 VWVSLGEPFELFDKRIGELKNFQVDMNMIKAAKNDVIFLHC 299 (365)
T ss_dssp CSCCTTCCHHHHHHHHHHHTTCCBCHHHHHHSCTTCEEEEC
T ss_pred ccccCCchhhhHHHHHHHhcccccCHHHHHhcCCCcEEECC
Confidence 32 1111 0 134688888888888888765
No 300
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.91 E-value=0.017 Score=55.25 Aligned_cols=96 Identities=13% Similarity=0.170 Sum_probs=62.2
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh----hhCCE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----READV 239 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~~aDi 239 (386)
.|++|.|+|.|.||..+++.+ +.+|++|++.+++..... + .++.+..........++.+.+ ...|+
T Consensus 164 ~g~~VlV~GaG~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~ 233 (339)
T 1rjw_A 164 PGEWVAIYGIGGLGHVAVQYA-KAMGLNVVAVDIGDEKLE--L-------AKELGADLVVNPLKEDAAKFMKEKVGGVHA 233 (339)
T ss_dssp TTCEEEEECCSTTHHHHHHHH-HHTTCEEEEECSCHHHHH--H-------HHHTTCSEEECTTTSCHHHHHHHHHSSEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHH--H-------HHHCCCCEEecCCCccHHHHHHHHhCCCCE
Confidence 578999999999999999985 789999999998765421 1 112222111001112333322 35899
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
|+.+....+ + -...++.++++..++.++..
T Consensus 234 vid~~g~~~-~----~~~~~~~l~~~G~~v~~g~~ 263 (339)
T 1rjw_A 234 AVVTAVSKP-A----FQSAYNSIRRGGACVLVGLP 263 (339)
T ss_dssp EEESSCCHH-H----HHHHHHHEEEEEEEEECCCC
T ss_pred EEECCCCHH-H----HHHHHHHhhcCCEEEEeccc
Confidence 998886322 1 24567778889899988753
No 301
>1ez4_A Lactate dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.30A {Lactobacillus pentosus} SCOP: c.2.1.5 d.162.1.1
Probab=95.90 E-value=0.019 Score=54.90 Aligned_cols=103 Identities=17% Similarity=0.243 Sum_probs=57.7
Q ss_pred CeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|+|.|.+|.+++..|+. +..-++..+|...........+.-+. . ... .+.... .+..+.++.||+|+++.
T Consensus 6 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~-~-~~~-~~~~v~--~~~~~a~~~aDvVii~a 80 (318)
T 1ez4_A 6 QKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDA-Q-AFT-APKKIY--SGEYSDCKDADLVVITA 80 (318)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGG-G-GGS-CCCEEE--ECCGGGGTTCSEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHHHHHHHHHHHH-H-Hhc-CCeEEE--ECCHHHhCCCCEEEECC
Confidence 689999999999999987753 33348999999754321111111000 0 011 111121 23466789999999998
Q ss_pred CCChh---hh--------hccc--HHHHhcCCCCcEEEEcCC
Q 016620 245 VLDKT---TY--------HLIN--KERLATMKKEAILVNCSR 273 (386)
Q Consensus 245 Plt~~---t~--------~li~--~~~~~~mk~gailIN~aR 273 (386)
+.... ++ .++. .+.+....|.+++++++-
T Consensus 81 g~~~~~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 122 (318)
T 1ez4_A 81 GAPQKPGESRLDLVNKNLNILSSIVKPVVDSGFDGIFLVAAN 122 (318)
T ss_dssp CC----------CHHHHHHHHHHHHHHHHHTTCCSEEEECSS
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 65321 11 1111 022333468899999843
No 302
>2we8_A Xanthine dehydrogenase; oxidoreductase; 2.30A {Mycobacterium smegmatis} PDB: 2we7_A
Probab=95.89 E-value=0.016 Score=57.04 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=67.0
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.-.++-|+|.|.+|+++|+.+ +.+|++|+++|++..-. + .+-+..+|-++..
T Consensus 203 P~~rL~IfGAGhva~ala~~a-~~lg~~V~v~D~R~~~~--------------------------~-~~~fp~a~~~~~~ 254 (386)
T 2we8_A 203 PRPRMLVFGAIDFAAAVAQQG-AFLGYRVTVCDARPVFA--------------------------T-TARFPTADEVVVD 254 (386)
T ss_dssp CCCEEEEECCSTHHHHHHHHH-HHTTCEEEEEESCTTTS--------------------------C-TTTCSSSSEEEES
T ss_pred CCCEEEEECCCHHHHHHHHHH-HhCCCEEEEECCchhhc--------------------------c-cccCCCceEEEeC
Confidence 345899999999999999986 79999999999865320 0 1113456655555
Q ss_pred cCCChhhhhcccHHHHh---cCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEE
Q 016620 244 PVLDKTTYHLINKERLA---TMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVG 295 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~---~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaa 295 (386)
.|. + .+.. +. .+.+++++|=+.++.-.|...|..+|+++.....+
T Consensus 255 ~p~--~---~~~~--~~~~~~~~~~t~vvvlTh~~~~D~~~L~~aL~~~~~~YIG 302 (386)
T 2we8_A 255 WPH--R---YLAA--QAEAGAIDARTVVCVLTHDPKFDVPLLEVALRLPDIAYIG 302 (386)
T ss_dssp CHH--H---HHHH--HHHHTCCCTTCEEEECCCCHHHHHHHHHHHTTSSCCSEEE
T ss_pred ChH--H---HHHh--hccccCCCCCcEEEEEECChHhHHHHHHHHhcCCCCCEEE
Confidence 541 1 1111 11 26788899999999989999999999886333333
No 303
>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A
Probab=95.87 E-value=0.013 Score=54.07 Aligned_cols=105 Identities=20% Similarity=0.210 Sum_probs=62.8
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhH--H-HH-----------HHhhhhhhhhhcCCCCcccc
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATR--L-EK-----------FVTAYGQFLKANGEQPVTWK 225 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~--~-~~-----------~~~~~~~~~~~~~~~~~~~~ 225 (386)
..|.+++|.|+|+|.+|..+|+.|+ ..|. ++..+|...-.. + .+ ..+...+.+.+.. ......
T Consensus 24 ~~l~~~~VlvvG~GglG~~va~~La-~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~n-p~~~v~ 101 (251)
T 1zud_1 24 QKLLDSQVLIIGLGGLGTPAALYLA-GAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLN-PDIQLT 101 (251)
T ss_dssp HHHHTCEEEEECCSTTHHHHHHHHH-HTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHC-TTSEEE
T ss_pred HHHhcCcEEEEccCHHHHHHHHHHH-HcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHC-CCCEEE
Confidence 4689999999999999999999985 6676 788887643110 0 00 0000000111100 000011
Q ss_pred c------cCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016620 226 R------ASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 226 ~------~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~ 271 (386)
. ..+++++++++|+|+.++. +.+++.++++..... +.-+|..
T Consensus 102 ~~~~~~~~~~~~~~~~~~DvVi~~~d-~~~~r~~l~~~~~~~---~~p~i~~ 149 (251)
T 1zud_1 102 ALQQRLTGEALKDAVARADVVLDCTD-NMATRQEINAACVAL---NTPLITA 149 (251)
T ss_dssp EECSCCCHHHHHHHHHHCSEEEECCS-SHHHHHHHHHHHHHT---TCCEEEE
T ss_pred EEeccCCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHHh---CCCEEEE
Confidence 0 1245678899999999987 577888888776653 3335554
No 304
>2zqz_A L-LDH, L-lactate dehydrogenase; oxidoreductase, rossmann fold, cytoplasm, glycolysis, NAD, phosphoprotein; 2.50A {Lactobacillus casei} PDB: 2zqy_A 3vkv_A* 1llc_A*
Probab=95.86 E-value=0.02 Score=55.03 Aligned_cols=108 Identities=19% Similarity=0.262 Sum_probs=60.0
Q ss_pred CCeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.++|+|+|.|.+|.+++..|+. +..-++..+|...........+.-+. . ... .+.... .+..+.++.||+|+++
T Consensus 9 ~~KI~IiGaG~vG~~la~~l~~~~~~~el~L~Di~~~~~~g~~~dl~~~-~-~~~-~~~~i~--~~~~~a~~~aDvVii~ 83 (326)
T 2zqz_A 9 HQKVILVGDGAVGSSYAYAMVLQGIAQEIGIVDIFKDKTKGDAIDLSNA-L-PFT-SPKKIY--SAEYSDAKDADLVVIT 83 (326)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHTT-G-GGS-CCCEEE--ECCGGGGGGCSEEEEC
T ss_pred CCEEEEECCCHHHHHHHHHHHcCCCCCEEEEEeCCchHhHHHHHHHHHH-H-Hhc-CCeEEE--ECCHHHhCCCCEEEEc
Confidence 4689999999999999987743 33348999999754321111111000 0 001 111121 2346678999999999
Q ss_pred cCCChh---hh--------hccc--HHHHhcCCCCcEEEEcCCCcccCH
Q 016620 244 PVLDKT---TY--------HLIN--KERLATMKKEAILVNCSRGPVIDE 279 (386)
Q Consensus 244 lPlt~~---t~--------~li~--~~~~~~mk~gailIN~aRg~~vde 279 (386)
.+.... ++ .++. .+.+....|.+++++++ ..+|.
T Consensus 84 ag~~~k~g~~R~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~t--NPv~~ 130 (326)
T 2zqz_A 84 AGAPQKPGETRLDLVNKNLKILKSIVDPIVDSGFNGIFLVAA--NPVDI 130 (326)
T ss_dssp CCCC-----CHHHHHHHHHHHHHHHHHHHHHHTCCSEEEECS--SSHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEeC--CcHHH
Confidence 865321 11 1110 01222236889999984 34444
No 305
>1zh8_A Oxidoreductase; TM0312, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI; HET: MSE NAP; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.5
Probab=95.85 E-value=0.055 Score=51.89 Aligned_cols=69 Identities=16% Similarity=0.209 Sum_probs=47.8
Q ss_pred CeEEEEecC-hhHHHHHHHHHhc-CCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEE
Q 016620 166 QTVGVIGAG-RIGSAYARMMVEG-FKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (386)
Q Consensus 166 ~~vgIvG~G-~IG~~iA~~L~~~-fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (386)
.+|||||+| .+|+..++.+.+. -++++ .++|++.... +++.+.| +. ...+.+++++++ +.|+|
T Consensus 19 irvgiIG~G~~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~V 86 (340)
T 1zh8_A 19 IRLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHA-EEFAKMV-------GN----PAVFDSYEELLESGLVDAV 86 (340)
T ss_dssp EEEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHH-HHHHHHH-------SS----CEEESCHHHHHHSSCCSEE
T ss_pred eeEEEEecCHHHHHHHHHHHHhCCCceEEEEEEcCCHHHH-HHHHHHh-------CC----CcccCCHHHHhcCCCCCEE
Confidence 479999999 8999999887432 36776 5778876542 2222222 11 123578999997 58999
Q ss_pred EEccCC
Q 016620 241 SLHPVL 246 (386)
Q Consensus 241 vl~lPl 246 (386)
++|+|.
T Consensus 87 ~i~tp~ 92 (340)
T 1zh8_A 87 DLTLPV 92 (340)
T ss_dssp EECCCG
T ss_pred EEeCCc
Confidence 999995
No 306
>1hdg_O Holo-D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehy(D)-NAD(A)); HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=95.85 E-value=0.013 Score=56.64 Aligned_cols=32 Identities=25% Similarity=0.385 Sum_probs=25.3
Q ss_pred CeEEEEecChhHHHHHHHHHhc--CCcEEEEEcC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~--fg~~V~~~d~ 197 (386)
.+|||+|+|.||+.+.|.|... -.++|.+.+.
T Consensus 1 ~kVgI~G~G~iGr~llR~l~~~~~p~~eivain~ 34 (332)
T 1hdg_O 1 ARVAINGFGRIGRLVYRIIYERKNPDIEVVAIND 34 (332)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHTCTTCEEEEEEC
T ss_pred CEEEEEccCHHHHHHHHHHHhCCCCCeEEEEEEc
Confidence 3799999999999999987433 3578876654
No 307
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=95.85 E-value=0.0078 Score=58.40 Aligned_cols=95 Identities=14% Similarity=0.167 Sum_probs=62.3
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCCh---hhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh----
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ---ATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL---- 234 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell---- 234 (386)
.+.|++|.|+|.|.||..+++.+ +.+|++|++.+++. ... ++... .+.... . .. ++.+.+
T Consensus 178 ~~~g~~VlV~GaG~vG~~~~q~a-~~~Ga~Vi~~~~~~~~~~~~--~~~~~-------~ga~~v-~-~~-~~~~~~~~~~ 244 (366)
T 2cdc_A 178 TLNCRKVLVVGTGPIGVLFTLLF-RTYGLEVWMANRREPTEVEQ--TVIEE-------TKTNYY-N-SS-NGYDKLKDSV 244 (366)
T ss_dssp SSTTCEEEEESCHHHHHHHHHHH-HHHTCEEEEEESSCCCHHHH--HHHHH-------HTCEEE-E-CT-TCSHHHHHHH
T ss_pred cCCCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeCCccchHHH--HHHHH-------hCCcee-c-hH-HHHHHHHHhC
Confidence 46799999999999999999985 78999999999875 332 11111 121111 0 01 221222
Q ss_pred hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 235 ~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
...|+|+.+....... + ...++.|+++..+|+++-
T Consensus 245 ~~~d~vid~~g~~~~~---~-~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 245 GKFDVIIDATGADVNI---L-GNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp CCEEEEEECCCCCTHH---H-HHHGGGEEEEEEEEECSC
T ss_pred CCCCEEEECCCChHHH---H-HHHHHHHhcCCEEEEEec
Confidence 3589999998753221 0 456778889989998865
No 308
>4gsl_A Ubiquitin-like modifier-activating enzyme ATG7; ubiquitin-like protein activation enzyme, ubiquitin-like Pro transfer enzyme, protein transport; 2.70A {Saccharomyces cerevisiae} PDB: 3vh2_A 4gsk_A 3vh1_A
Probab=95.85 E-value=0.029 Score=58.16 Aligned_cols=142 Identities=14% Similarity=0.137 Sum_probs=83.0
Q ss_pred cEEecCCCC-CchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEEEecChhHHHHHHHHHhcC
Q 016620 110 IAVGNTPGV-LTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGF 188 (386)
Q Consensus 110 I~v~n~~~~-~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgIvG~G~IG~~iA~~L~~~f 188 (386)
-.+.+-... .....||.+.-+-|.+.| |.-|... ....|++++|.|||+|.+|..+|+.|+ ..
T Consensus 285 ~~~~~l~~~~dp~~la~~~~~Lnlklm~-------------wRllp~~--g~ekL~~arVLIVGaGGLGs~vA~~La-~a 348 (615)
T 4gsl_A 285 PRVVDLSSLLDPLKIADQSVDLNLKLMK-------------WRILPDL--NLDIIKNTKVLLLGAGTLGCYVSRALI-AW 348 (615)
T ss_dssp CEEEECHHHHCHHHHHHHHHHHHHHHHH-------------HHTCTTC--CHHHHHTCEEEEECCSHHHHHHHHHHH-HT
T ss_pred eeEEeccccCCHHHHHhhhhhhhhHHHH-------------Hhhcchh--hHHHHhCCeEEEECCCHHHHHHHHHHH-Hc
Confidence 455554443 566778877777666665 3223211 114689999999999999999999985 56
Q ss_pred Cc-EEEEEcCChhhH--H-HH-----------HHhhhhhhhhhcCCCCccccc---------------------cCCHHH
Q 016620 189 KM-NLIYYDLYQATR--L-EK-----------FVTAYGQFLKANGEQPVTWKR---------------------ASSMDE 232 (386)
Q Consensus 189 g~-~V~~~d~~~~~~--~-~~-----------~~~~~~~~~~~~~~~~~~~~~---------------------~~~l~e 232 (386)
|. ++..+|...-.. + ++ ..+...+.+++... ...... ...+++
T Consensus 349 GVG~ItLvD~D~Ve~SNL~RQ~L~~~~dIG~~KAeaaa~~L~~iNP-~V~v~~~~~~Ipm~gh~v~~e~~~~l~~~~l~~ 427 (615)
T 4gsl_A 349 GVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFP-LMDATGVKLSIPMIGHKLVNEEAQHKDFDRLRA 427 (615)
T ss_dssp TCCEEEEECCCBCCTTGGGTSTTCCGGGTTSBHHHHHHHHHHHHCT-TCEEEEECCCCCCTTCCCSCHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCcccCcccccCCChhhcChHHHHHHHHHHHhhCC-CcEEEEeeccccccCccccchhhhcCCHHHHHH
Confidence 66 788888753100 0 00 00000011111110 011111 123567
Q ss_pred HhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016620 233 VLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 233 ll~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~a 272 (386)
+++++|+|+.|+- +.+++.+++..... .+..+|+.+
T Consensus 428 ll~~~DlVvd~tD-n~~tR~~ln~~c~~---~~~PlI~aa 463 (615)
T 4gsl_A 428 LIKEHDIIFLLVD-SRESRWLPSLLSNI---ENKTVINAA 463 (615)
T ss_dssp HHHHCSEEEECCS-SGGGTHHHHHHHHH---TTCEEEEEE
T ss_pred HhhcCCEEEecCC-CHHHHHHHHHHHHH---cCCeEEEEE
Confidence 8899999999985 56788888876654 344566654
No 309
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.84 E-value=0.011 Score=56.85 Aligned_cols=95 Identities=16% Similarity=0.089 Sum_probs=60.5
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh------h
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (386)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++..... + .++.+..........++.+.+. .
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~~--~-------~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g 236 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVA-KASGAYPVIVSEPSDFRRE--L-------AKKVGADYVINPFEEDVVKEVMDITDGNG 236 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHHH--H-------HHHHTCSEEECTTTSCHHHHHHHHTTTSC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--H-------HHHhCCCEEECCCCcCHHHHHHHHcCCCC
Confidence 789999999999999999985 78999 9999998754321 1 1111221111111123433332 4
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+.+....+ + -...++.++++..++.++.
T Consensus 237 ~D~vid~~g~~~-~----~~~~~~~l~~~G~iv~~g~ 268 (348)
T 2d8a_A 237 VDVFLEFSGAPK-A----LEQGLQAVTPAGRVSLLGL 268 (348)
T ss_dssp EEEEEECSCCHH-H----HHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCCHH-H----HHHHHHHHhcCCEEEEEcc
Confidence 788888886321 1 1455677788888888764
No 310
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=95.84 E-value=0.035 Score=54.50 Aligned_cols=101 Identities=17% Similarity=0.168 Sum_probs=61.1
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh------
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------ 235 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------ 235 (386)
-.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..... +. ++.+..........++.+.+.
T Consensus 212 ~~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~~-------~~lGa~~vi~~~~~~~~~~i~~~t~g~ 281 (404)
T 3ip1_A 212 RPGDNVVILGGGPIGLAAVAIL-KHAGASKVILSEPSEVRRN--LA-------KELGADHVIDPTKENFVEAVLDYTNGL 281 (404)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHHH--HH-------HHHTCSEEECTTTSCHHHHHHHHTTTC
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HH-------HHcCCCEEEcCCCCCHHHHHHHHhCCC
Confidence 4688999999999999999985 79999 9999998765421 11 122322111111123333322
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+-++.....+...+..-.+..++++..++.++-
T Consensus 282 g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 282 GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 48999998875322222211111233488888888864
No 311
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=95.84 E-value=0.027 Score=56.59 Aligned_cols=98 Identities=13% Similarity=0.136 Sum_probs=67.0
Q ss_pred ccccCCCeEEEEecC----------hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC
Q 016620 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (386)
Q Consensus 160 g~~l~g~~vgIvG~G----------~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (386)
+..+.|++|+|+|+- +-...+++.| ...|++|.+|||........ .|+ .......+
T Consensus 313 ~~~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~----------~~~~~~~~ 378 (450)
T 3gg2_A 313 KGNVQGRCVAIWGLSFKPGTDDMREAPSLVLIEKL-LEVGCRVRVYDPVAMKEAQK---RLG----------DKVEYTTD 378 (450)
T ss_dssp TTCCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSCHHHHHH---HHG----------GGSEECSS
T ss_pred cccCCCCEEEEEeeeeCCCCcccccChHHHHHHHH-HHCCCEEEEECCCCcHHHHH---hcC----------ccceecCC
Confidence 346899999999984 4578899998 68999999999987542221 110 01123468
Q ss_pred HHHHhhhCCEEEEccCCChhhhhcccHHH-HhcCCCCcEEEEcCCCc
Q 016620 230 MDEVLREADVISLHPVLDKTTYHLINKER-LATMKKEAILVNCSRGP 275 (386)
Q Consensus 230 l~ell~~aDiVvl~lPlt~~t~~li~~~~-~~~mk~gailIN~aRg~ 275 (386)
+++.++.+|.|+++++- ++-+. ++-+. .+.|+ +.+++|. |+-
T Consensus 379 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~-~~~i~D~-r~~ 421 (450)
T 3gg2_A 379 MYDAVRGAEALFHVTEW-KEFRM-PDWSALSQAMA-ASLVIDG-RNV 421 (450)
T ss_dssp HHHHTTTCSCEEECSCC-GGGSS-CCHHHHHHHSS-SCEEEES-SCC
T ss_pred HHHHhcCCCEEEEccCC-HHHhh-cCHHHHHHhcC-CCEEEEC-CCC
Confidence 89999999999999975 33333 34444 44566 5688885 543
No 312
>1b7g_O Protein (glyceraldehyde 3-phosphate dehydrogenase; archaea, hyperthermophIle, GAPDH, hyperthermophilic dehydrog oxidoreductase; 2.05A {Sulfolobus solfataricus} SCOP: c.2.1.3 d.81.1.1
Probab=95.79 E-value=0.032 Score=53.87 Aligned_cols=80 Identities=15% Similarity=0.195 Sum_probs=43.7
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEE-cCChhhHHHHHHhhhh-hhhhh-cC---CCCccccccCCHHHHhhhCCEE
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYY-DLYQATRLEKFVTAYG-QFLKA-NG---EQPVTWKRASSMDEVLREADVI 240 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~-d~~~~~~~~~~~~~~~-~~~~~-~~---~~~~~~~~~~~l~ell~~aDiV 240 (386)
+|||+|+|.||+.+++.|...-++++.+. |++.... ......+. ..... .. ....+.....++++++.++|+|
T Consensus 3 kVgIiGaG~iG~~~~r~L~~~p~~elvav~d~~~~~~-~~~a~~~g~~~~~~~~~~~~~~~~~v~v~~~~e~l~~~vDvV 81 (340)
T 1b7g_O 3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYE-AFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIV 81 (340)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHH-HHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEE
T ss_pred EEEEEecCHHHHHHHHHHHcCCCCEEEEEEcCChHHH-HHHHHhcCcceecCcCHHHHhcccccccccCHhHhhcCCCEE
Confidence 79999999999999998753346776644 5543221 11000000 00000 00 0000011123566777889999
Q ss_pred EEccCCC
Q 016620 241 SLHPVLD 247 (386)
Q Consensus 241 vl~lPlt 247 (386)
+.|+|..
T Consensus 82 ~~aTp~~ 88 (340)
T 1b7g_O 82 VDTTPNG 88 (340)
T ss_dssp EECCSTT
T ss_pred EECCCCc
Confidence 9999964
No 313
>2tmg_A Protein (glutamate dehydrogenase); metabolic role, mutant, oxidoreductase; 2.90A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.1 PDB: 1b26_A 1b3b_A
Probab=95.79 E-value=0.12 Score=51.26 Aligned_cols=117 Identities=19% Similarity=0.206 Sum_probs=71.5
Q ss_pred ccccCCCeEEEEecChhHHHHHHHHHhc-CCcEEEE-EcCC---------hhhHHHHHHhhhhhhhhhcCCCCccccccC
Q 016620 160 GNLLKGQTVGVIGAGRIGSAYARMMVEG-FKMNLIY-YDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRAS 228 (386)
Q Consensus 160 g~~l~g~~vgIvG~G~IG~~iA~~L~~~-fg~~V~~-~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (386)
|.++.|++|.|.|+|++|+..|+.| .. .|++|+. .|.+ ....+.++.+.. ............
T Consensus 204 g~~l~g~~vaVqG~GnVG~~~a~~L-~e~~GakvVavsD~~G~i~dp~Gld~~~l~~~~~~~------g~l~~y~~a~~~ 276 (415)
T 2tmg_A 204 GIDPKKATVAVQGFGNVGQFAALLI-SQELGSKVVAVSDSRGGIYNPEGFDVEELIRYKKEH------GTVVTYPKGERI 276 (415)
T ss_dssp TCCTTTCEEEEECCSHHHHHHHHHH-HHTTCCEEEEEECSSCEEECTTCCCHHHHHHHHHHS------SCSTTCSSSEEE
T ss_pred CCCcCCCEEEEECCcHHHHHHHHHH-HHhcCCEEEEEEeCCCeEECCCCCCHHHHHHHHHhh------CCcccCCCceEc
Confidence 3579999999999999999999987 56 8999984 4432 111122211110 000000000122
Q ss_pred CHHHHh-hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016620 229 SMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 229 ~l~ell-~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 291 (386)
+.++++ ..||+++-|.. .+.|+.+....++ ..+++-.+-+.+- .++- +.|.+..+
T Consensus 277 ~~~eil~~~~DIliP~A~-----~n~i~~~~a~~l~-ak~V~EgAN~p~t-~~a~-~~l~~~Gi 332 (415)
T 2tmg_A 277 TNEELLELDVDILVPAAL-----EGAIHAGNAERIK-AKAVVEGANGPTT-PEAD-EILSRRGI 332 (415)
T ss_dssp CHHHHTTCSCSEEEECSS-----TTSBCHHHHTTCC-CSEEECCSSSCBC-HHHH-HHHHHTTC
T ss_pred CchhhhcCCCcEEEecCC-----cCccCcccHHHcC-CeEEEeCCCcccC-HHHH-HHHHHCCC
Confidence 455655 48999998886 4556777777774 5588888888874 3333 44555443
No 314
>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*
Probab=95.78 E-value=0.017 Score=54.09 Aligned_cols=39 Identities=18% Similarity=0.296 Sum_probs=33.9
Q ss_pred ccCCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 162 LLKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 162 ~l~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
++.|+++.|+| .|.||+++++.|+ ..|++|++++|+...
T Consensus 116 ~l~gk~vlVtGaaGGiG~aia~~L~-~~G~~V~i~~R~~~~ 155 (287)
T 1lu9_A 116 SVKGKKAVVLAGTGPVGMRSAALLA-GEGAEVVLCGRKLDK 155 (287)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHH-HTTCEEEEEESSHHH
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-HCcCEEEEEECCHHH
Confidence 47889999999 9999999999984 789999999997643
No 315
>3u3x_A Oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.79A {Sinorhizobium meliloti}
Probab=95.78 E-value=0.058 Score=52.24 Aligned_cols=69 Identities=14% Similarity=0.212 Sum_probs=47.0
Q ss_pred CCeEEEEecChhHH-HHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEE
Q 016620 165 GQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~-~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiV 240 (386)
-.+|||||+|.+|. .++..+ +.-++++. ++|++.... +.+.+.| +. ...+.++++++++ .|+|
T Consensus 26 ~irvgiiG~G~~~~~~~~~~~-~~~~~~lvav~d~~~~~a-~~~a~~~-------~~----~~~~~~~~~ll~~~~vD~V 92 (361)
T 3u3x_A 26 ELRFAAVGLNHNHIYGQVNCL-LRAGARLAGFHEKDDALA-AEFSAVY-------AD----ARRIATAEEILEDENIGLI 92 (361)
T ss_dssp CCEEEEECCCSTTHHHHHHHH-HHTTCEEEEEECSCHHHH-HHHHHHS-------SS----CCEESCHHHHHTCTTCCEE
T ss_pred CcEEEEECcCHHHHHHHHHHh-hcCCcEEEEEEcCCHHHH-HHHHHHc-------CC----CcccCCHHHHhcCCCCCEE
Confidence 35899999999995 566665 45688855 678876542 2222221 11 1235799999975 8999
Q ss_pred EEccCC
Q 016620 241 SLHPVL 246 (386)
Q Consensus 241 vl~lPl 246 (386)
++|+|.
T Consensus 93 ~I~tp~ 98 (361)
T 3u3x_A 93 VSAAVS 98 (361)
T ss_dssp EECCCH
T ss_pred EEeCCh
Confidence 999994
No 316
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=95.77 E-value=0.019 Score=53.84 Aligned_cols=96 Identities=18% Similarity=0.239 Sum_probs=57.3
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.+|+|+| +|.||+.+++.+...-++++.+ +|+........ + . ..-.+... +.....++++++.++|+|+-+
T Consensus 8 ikV~V~Ga~G~MG~~i~~~l~~~~~~eLv~~~d~~~~~~~G~--d-~---gel~g~~~-gv~v~~dl~~ll~~~DVVIDf 80 (272)
T 4f3y_A 8 MKIAIAGASGRMGRMLIEAVLAAPDATLVGALDRTGSPQLGQ--D-A---GAFLGKQT-GVALTDDIERVCAEADYLIDF 80 (272)
T ss_dssp EEEEESSTTSHHHHHHHHHHHHCTTEEEEEEBCCTTCTTTTS--B-T---TTTTTCCC-SCBCBCCHHHHHHHCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEEecCcccccc--c-H---HHHhCCCC-CceecCCHHHHhcCCCEEEEc
Confidence 5799999 8999999999875566888776 68764321000 0 0 00001111 233457999999999999998
Q ss_pred cCCChhh-hhcccHHHHhcCCCCcEEEEcCCC
Q 016620 244 PVLDKTT-YHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 244 lPlt~~t-~~li~~~~~~~mk~gailIN~aRg 274 (386)
.+ ++. ...+ . ..++.|.-+|-...|
T Consensus 81 T~--p~a~~~~~-~---~al~~G~~vVigTTG 106 (272)
T 4f3y_A 81 TL--PEGTLVHL-D---AALRHDVKLVIGTTG 106 (272)
T ss_dssp SC--HHHHHHHH-H---HHHHHTCEEEECCCC
T ss_pred CC--HHHHHHHH-H---HHHHcCCCEEEECCC
Confidence 75 332 2221 1 223455556655555
No 317
>3vh1_A Ubiquitin-like modifier-activating enzyme ATG7; autophagy, zinc binding, metal binding protein; 3.00A {Saccharomyces cerevisiae} PDB: 3vh2_A
Probab=95.74 E-value=0.016 Score=59.91 Aligned_cols=107 Identities=16% Similarity=0.190 Sum_probs=63.6
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhH--H-HH-----------HHhhhhhhhhhcC-CCCccc
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATR--L-EK-----------FVTAYGQFLKANG-EQPVTW 224 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~--~-~~-----------~~~~~~~~~~~~~-~~~~~~ 224 (386)
..|.+++|.|||+|.+|..+|+.|+ ..|. ++..+|...-+. + ++ ..+...+.+++.. ......
T Consensus 323 ~kL~~~kVLIVGaGGLGs~va~~La-~aGVG~ItLvD~D~Ve~SNL~RQ~L~~~~DvG~~KAeaaa~~L~~iNP~v~v~~ 401 (598)
T 3vh1_A 323 DIIKNTKVLLLGAGTLGCYVSRALI-AWGVRKITFVDNGTVSYSNPVRQALYNFEDCGKPKAELAAASLKRIFPLMDATG 401 (598)
T ss_dssp HHHHTCEEEEECCSHHHHHHHHHHH-TTTCCEEEEECCSBCCTTSTTTSTTCCSTTCSSBHHHHHHHHHHHHCTTCEEEE
T ss_pred HHHhCCeEEEECCCHHHHHHHHHHH-HcCCCEEEEECCCcccccccccccccchhhcCcHHHHHHHHHHHhHCCCcEEEE
Confidence 5689999999999999999999985 6676 788887542100 0 00 0000001111110 000000
Q ss_pred c-------------------ccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcC
Q 016620 225 K-------------------RASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 225 ~-------------------~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~a 272 (386)
. ....++++++++|+|+.|+. +.+++.+++...... +..+|+.+
T Consensus 402 ~~~~I~~pgh~i~~~~~~~l~~~~l~~li~~~DvVvdatD-n~~tR~lin~~c~~~---~~plI~aa 464 (598)
T 3vh1_A 402 VKLSIPMIGHKLVNEEAQHKDFDRLRALIKEHDIIFLLVD-SRESRWLPSLLSNIE---NKTVINAA 464 (598)
T ss_dssp ECCCCCCSSCCCCSHHHHHHHHHHHHHHHHHCSEEEECCS-BGGGTHHHHHHHHHT---TCEEEEEE
T ss_pred EeccccccCcccccccccccCHHHHHHHHhcCCEEEECCC-CHHHHHHHHHHHHhc---CCCEEEEE
Confidence 0 01235678899999999986 567788887765543 34566654
No 318
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=95.74 E-value=0.013 Score=51.29 Aligned_cols=95 Identities=16% Similarity=0.142 Sum_probs=58.6
Q ss_pred CCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHH-HHh-----hh
Q 016620 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMD-EVL-----RE 236 (386)
Q Consensus 164 ~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-ell-----~~ 236 (386)
.|++|.|+| .|.||+.+++.+ +..|++|++.+++...... .+..+..........+.. ++. ..
T Consensus 38 ~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~~~---------~~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 107 (198)
T 1pqw_A 38 PGERVLIHSATGGVGMAAVSIA-KMIGARIYTTAGSDAKREM---------LSRLGVEYVGDSRSVDFADEILELTDGYG 107 (198)
T ss_dssp TTCEEEETTTTSHHHHHHHHHH-HHHTCEEEEEESSHHHHHH---------HHTTCCSEEEETTCSTHHHHHHHHTTTCC
T ss_pred CCCEEEEeeCCChHHHHHHHHH-HHcCCEEEEEeCCHHHHHH---------HHHcCCCEEeeCCcHHHHHHHHHHhCCCC
Confidence 678999999 699999999986 6789999999987543211 111121111000111222 221 13
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
.|+|+.+.. .++ -...++.|+++..+|+++..
T Consensus 108 ~D~vi~~~g--~~~----~~~~~~~l~~~G~~v~~g~~ 139 (198)
T 1pqw_A 108 VDVVLNSLA--GEA----IQRGVQILAPGGRFIELGKK 139 (198)
T ss_dssp EEEEEECCC--THH----HHHHHHTEEEEEEEEECSCG
T ss_pred CeEEEECCc--hHH----HHHHHHHhccCCEEEEEcCC
Confidence 688887764 121 25667788888888888653
No 319
>4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli}
Probab=95.70 E-value=0.018 Score=55.74 Aligned_cols=68 Identities=21% Similarity=0.297 Sum_probs=43.5
Q ss_pred CeEEEEecChhHHHHHHHHHhcC--------CcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGF--------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR- 235 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~f--------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~- 235 (386)
-+|||||+|.||+.-++.+ +.. +++|. ++|++.... +++.+.| +. ...+.+++++++
T Consensus 26 irvgiIG~G~ig~~H~~a~-~~~~~~~~~~~~~~lvav~d~~~~~a-~~~a~~~-------g~----~~~y~d~~ell~~ 92 (393)
T 4fb5_A 26 LGIGLIGTGYMGKCHALAW-NAVKTVFGDVERPRLVHLAEANAGLA-EARAGEF-------GF----EKATADWRALIAD 92 (393)
T ss_dssp CEEEEECCSHHHHHHHHHH-TTHHHHHCSSCCCEEEEEECC--TTH-HHHHHHH-------TC----SEEESCHHHHHHC
T ss_pred ccEEEEcCCHHHHHHHHHH-HhhhhhhccCCCcEEEEEECCCHHHH-HHHHHHh-------CC----CeecCCHHHHhcC
Confidence 4799999999999877654 222 45655 568776432 2222222 11 123579999996
Q ss_pred -hCCEEEEccCC
Q 016620 236 -EADVISLHPVL 246 (386)
Q Consensus 236 -~aDiVvl~lPl 246 (386)
+.|+|++|+|.
T Consensus 93 ~~iDaV~IatP~ 104 (393)
T 4fb5_A 93 PEVDVVSVTTPN 104 (393)
T ss_dssp TTCCEEEECSCG
T ss_pred CCCcEEEECCCh
Confidence 47899999995
No 320
>4ew6_A D-galactose-1-dehydrogenase protein; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium, two domain; 2.30A {Rhizobium etli}
Probab=95.67 E-value=0.015 Score=55.81 Aligned_cols=62 Identities=13% Similarity=0.192 Sum_probs=45.2
Q ss_pred CCeEEEEecChhHH-HHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh---CCE
Q 016620 165 GQTVGVIGAGRIGS-AYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---ADV 239 (386)
Q Consensus 165 g~~vgIvG~G~IG~-~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---aDi 239 (386)
-.+|||||+|.||+ ..++.+++.-+++|. ++|++... . +...+.+++++++. .|+
T Consensus 25 ~~rvgiiG~G~ig~~~~~~~l~~~~~~~lvav~d~~~~~------------------~--g~~~~~~~~~ll~~~~~vD~ 84 (330)
T 4ew6_A 25 PINLAIVGVGKIVRDQHLPSIAKNANFKLVATASRHGTV------------------E--GVNSYTTIEAMLDAEPSIDA 84 (330)
T ss_dssp CEEEEEECCSHHHHHTHHHHHHHCTTEEEEEEECSSCCC------------------T--TSEEESSHHHHHHHCTTCCE
T ss_pred CceEEEEecCHHHHHHHHHHHHhCCCeEEEEEEeCChhh------------------c--CCCccCCHHHHHhCCCCCCE
Confidence 35899999999999 688877433477865 56765421 1 12245799999976 899
Q ss_pred EEEccCC
Q 016620 240 ISLHPVL 246 (386)
Q Consensus 240 Vvl~lPl 246 (386)
|++++|.
T Consensus 85 V~i~tp~ 91 (330)
T 4ew6_A 85 VSLCMPP 91 (330)
T ss_dssp EEECSCH
T ss_pred EEEeCCc
Confidence 9999994
No 321
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=95.63 E-value=0.06 Score=52.11 Aligned_cols=96 Identities=19% Similarity=0.092 Sum_probs=62.7
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc--CCHHHHhh----
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLR---- 235 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~---- 235 (386)
-.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..... + .++.+......... .++.+.+.
T Consensus 191 ~~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~~~~~~~~~ 260 (374)
T 1cdo_A 191 EPGSTCAVFGLGAVGLAAVMGC-HSAGAKRIIAVDLNPDKFE--K-------AKVFGATDFVNPNDHSEPISQVLSKMTN 260 (374)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--H-------HHHTTCCEEECGGGCSSCHHHHHHHHHT
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHH--H-------HHHhCCceEEeccccchhHHHHHHHHhC
Confidence 3688999999999999999985 78999 8999987765421 1 12223221111111 23544443
Q ss_pred -hCCEEEEccCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016620 236 -EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (386)
Q Consensus 236 -~aDiVvl~lPlt~~t~~li~~~~~~~mk~g-ailIN~aR 273 (386)
..|+|+-+.... ++ -...++.++++ ..++.++-
T Consensus 261 ~g~D~vid~~g~~-~~----~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 261 GGVDFSLECVGNV-GV----MRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp SCBSEEEECSCCH-HH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCCEEEECCCCH-HH----HHHHHHHhhcCCcEEEEEcC
Confidence 479999888642 21 24567888998 88888864
No 322
>2czc_A Glyceraldehyde-3-phosphate dehydrogenase; glycolysis, NAD, oxidoreductase, structural genomics; HET: NAD; 2.00A {Pyrococcus horikoshii} SCOP: c.2.1.3 d.81.1.1
Probab=95.62 E-value=0.019 Score=55.26 Aligned_cols=78 Identities=21% Similarity=0.204 Sum_probs=45.4
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhhhhhhhhcCCCCc--------cccccCCHHHHhhhC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAYGQFLKANGEQPV--------TWKRASSMDEVLREA 237 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~-~d~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~l~ell~~a 237 (386)
+|||+|+|.||+.+++.+...-++++.+ +|++.+. .......++ . ...+..+. ......+.++++.++
T Consensus 4 rVgIiG~G~iG~~~~r~l~~~~~~elvav~d~~~~~-~~~~~~~~g-~-~~~~~~~~~v~~~~~~~~~v~~d~~~l~~~v 80 (334)
T 2czc_A 4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDF-EAYRAKELG-I-PVYAASEEFIPRFEKEGFEVAGTLNDLLEKV 80 (334)
T ss_dssp EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSH-HHHHHHHTT-C-CEEESSGGGHHHHHHHTCCCSCBHHHHHTTC
T ss_pred EEEEEeEhHHHHHHHHHHhcCCCCEEEEEEcCCHHH-HHHHHHhcC-c-cccccccccceeccCCceEEcCcHHHhccCC
Confidence 7999999999999999874333677654 4554322 111111100 0 00000000 001235788998899
Q ss_pred CEEEEccCCC
Q 016620 238 DVISLHPVLD 247 (386)
Q Consensus 238 DiVvl~lPlt 247 (386)
|+|+.|+|..
T Consensus 81 DvV~~aTp~~ 90 (334)
T 2czc_A 81 DIIVDATPGG 90 (334)
T ss_dssp SEEEECCSTT
T ss_pred CEEEECCCcc
Confidence 9999999964
No 323
>3g79_A NDP-N-acetyl-D-galactosaminuronic acid dehydrogen; structural genomics, protein structure initiative; 2.40A {Methanosarcina mazei GO1}
Probab=95.62 E-value=0.023 Score=57.48 Aligned_cols=98 Identities=16% Similarity=0.281 Sum_probs=68.7
Q ss_pred cccCCCeEEEEecC----------hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCH
Q 016620 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (386)
Q Consensus 161 ~~l~g~~vgIvG~G----------~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (386)
..+.|++|+|+|+- +-...+++.| ...|++|.+|||.... + .. .....++
T Consensus 349 ~~~~~~~v~vlGlafK~~tdD~R~Sp~~~i~~~L-~~~g~~V~~~DP~~~~--------~---------~~--~~~~~~~ 408 (478)
T 3g79_A 349 KKMDGSKVAMLGWAFIKDSDDARNTPSEPYRDLC-LKAGASVMVHDPYVVN--------Y---------PG--VEISDNL 408 (478)
T ss_dssp CCSTTCEEEEECSSSSTTCSCCTTCTHHHHHHHH-HHHTCEEEEECSSCCC--------B---------TT--BCEESCH
T ss_pred cCCCCCEEEEEeeecCCCCcchhcCcHHHHHHHH-HHCCCEEEEECCCccc--------c---------cC--cceecCH
Confidence 46899999999974 3468899988 6889999999997642 0 00 1124688
Q ss_pred HHHhhhCCEEEEccCCChhhhhcccHH-HHhcCC-CCcEEEEcCCCcccCHHHH
Q 016620 231 DEVLREADVISLHPVLDKTTYHLINKE-RLATMK-KEAILVNCSRGPVIDEVAL 282 (386)
Q Consensus 231 ~ell~~aDiVvl~lPlt~~t~~li~~~-~~~~mk-~gailIN~aRg~~vde~aL 282 (386)
++.++.||.|+++++- ++-+. ++-+ ..+.|+ ++.+++|. |+ +.|.+.+
T Consensus 409 ~~~~~~ad~vvi~t~~-~~f~~-~d~~~~~~~~~~~~~~i~D~-rn-~~~~~~~ 458 (478)
T 3g79_A 409 EEVVRNADAIVVLAGH-SAYSS-LKADWAKKVSAKANPVIIDG-RN-VIEPDEF 458 (478)
T ss_dssp HHHHTTCSEEEECSCC-HHHHS-CCHHHHHHHHCCSSCEEEES-SS-CSCHHHH
T ss_pred HHHHhcCCEEEEecCC-HHHHh-hhHHHHHHHhccCCCEEEEC-CC-CCCHHHH
Confidence 9999999999999974 33333 3444 445677 47899994 64 4454443
No 324
>4gqa_A NAD binding oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: MSE; 2.42A {Klebsiella pneumoniae}
Probab=95.62 E-value=0.02 Score=56.39 Aligned_cols=70 Identities=24% Similarity=0.317 Sum_probs=46.7
Q ss_pred CeEEEEecChhHHHHHHHHHhc--------CCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG--------FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR- 235 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~--------fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~- 235 (386)
.+|||||+|.||+.-++.+++. -+++|. ++|++... .+++.+.| +. ...+.+++++++
T Consensus 27 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~elvav~d~~~~~-a~~~a~~~-------~~----~~~y~d~~~ll~~ 94 (412)
T 4gqa_A 27 LNIGLIGSGFMGQAHADAYRRAAMFYPDLPKRPHLYALADQDQAM-AERHAAKL-------GA----EKAYGDWRELVND 94 (412)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCTTSSSEEEEEEEECSSHHH-HHHHHHHH-------TC----SEEESSHHHHHHC
T ss_pred ceEEEEcCcHHHHHHHHHHHhccccccccCCCeEEEEEEcCCHHH-HHHHHHHc-------CC----CeEECCHHHHhcC
Confidence 4799999999999888776321 145655 56877654 23332222 21 123579999996
Q ss_pred -hCCEEEEccCCC
Q 016620 236 -EADVISLHPVLD 247 (386)
Q Consensus 236 -~aDiVvl~lPlt 247 (386)
+.|+|++|+|..
T Consensus 95 ~~vD~V~I~tp~~ 107 (412)
T 4gqa_A 95 PQVDVVDITSPNH 107 (412)
T ss_dssp TTCCEEEECSCGG
T ss_pred CCCCEEEECCCcH
Confidence 579999999953
No 325
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=95.61 E-value=0.0095 Score=52.99 Aligned_cols=101 Identities=11% Similarity=0.222 Sum_probs=60.3
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC--ccccccCCHHHHhhhCCEEEE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ell~~aDiVvl 242 (386)
++|.|.| .|.||+.+++.|++.-|++|++.+|+.....+.... ...+... .......+++++++.+|+|+.
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~------~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEII------DHERVTVIEGSFQNPGXLEQAVTNAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHH------TSTTEEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhcc------CCCceEEEECCCCCHHHHHHHHcCCCEEEE
Confidence 5699999 599999999998426799999999986511111000 0000000 001112355678899999999
Q ss_pred ccCCChhhhhcccHHHHhcCCC-C-cEEEEcCCCcc
Q 016620 243 HPVLDKTTYHLINKERLATMKK-E-AILVNCSRGPV 276 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~-g-ailIN~aRg~~ 276 (386)
+..... .. ....+..|++ + ..||++|....
T Consensus 80 ~ag~~n--~~--~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 80 GAMESG--SD--MASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp SCCCCH--HH--HHHHHHHHHHTTCCEEEEEEETTT
T ss_pred cCCCCC--hh--HHHHHHHHHhcCCCeEEEEeecee
Confidence 987531 11 4445555532 2 36888776443
No 326
>3btv_A Galactose/lactose metabolism regulatory protein GAL80; eukaryotic transcription repressor, acetylation, carbohydrate metabolism; 2.10A {Saccharomyces cerevisiae} PDB: 3bts_A 3v2u_A* 3btu_A
Probab=95.61 E-value=0.031 Score=55.77 Aligned_cols=71 Identities=11% Similarity=0.084 Sum_probs=48.5
Q ss_pred CeEEEEec----ChhHHHHHHHHHhc-CCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hC
Q 016620 166 QTVGVIGA----GRIGSAYARMMVEG-FKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EA 237 (386)
Q Consensus 166 ~~vgIvG~----G~IG~~iA~~L~~~-fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~a 237 (386)
.+|||||+ |.||+..++.|++. -++++ .++|++.... +.+.+. .+... ...+.+++++++ +.
T Consensus 21 irvgiIG~g~~gG~~g~~~~~~l~~~~~~~~lvav~d~~~~~~-~~~a~~-------~g~~~--~~~~~~~~~ll~~~~v 90 (438)
T 3btv_A 21 IRVGFVGLNAAKGWAIKTHYPAILQLSSQFQITALYSPKIETS-IATIQR-------LKLSN--ATAFPTLESFASSSTI 90 (438)
T ss_dssp EEEEEESCCTTSSSTTTTHHHHHHHTTTTEEEEEEECSSHHHH-HHHHHH-------TTCTT--CEEESSHHHHHHCSSC
T ss_pred CEEEEEcccCCCChHHHHHHHHHHhcCCCeEEEEEEeCCHHHH-HHHHHH-------cCCCc--ceeeCCHHHHhcCCCC
Confidence 57999999 99999999987433 37886 4778876542 222211 12111 123578999997 58
Q ss_pred CEEEEccCC
Q 016620 238 DVISLHPVL 246 (386)
Q Consensus 238 DiVvl~lPl 246 (386)
|+|++|+|.
T Consensus 91 D~V~i~tp~ 99 (438)
T 3btv_A 91 DMIVIAIQV 99 (438)
T ss_dssp SEEEECSCH
T ss_pred CEEEEeCCc
Confidence 999999994
No 327
>2nvw_A Galactose/lactose metabolism regulatory protein GAL80; transcription, galactose metabolism, repressor; 2.10A {Kluyveromyces lactis} SCOP: c.2.1.3 d.81.1.5 PDB: 3e1k_A
Probab=95.60 E-value=0.056 Score=54.61 Aligned_cols=71 Identities=10% Similarity=0.136 Sum_probs=48.5
Q ss_pred CeEEEEec----ChhHHHHHHHHHhc-CCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hC
Q 016620 166 QTVGVIGA----GRIGSAYARMMVEG-FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EA 237 (386)
Q Consensus 166 ~~vgIvG~----G~IG~~iA~~L~~~-fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~a 237 (386)
.+|||||+ |.||+..++.|++. -++++. ++|++.... +.+.+. .+... ...+.+++++++ +.
T Consensus 40 irvgiIG~g~~GG~~g~~h~~~l~~~~~~~~lvav~d~~~~~a-~~~a~~-------~g~~~--~~~~~d~~ell~~~~v 109 (479)
T 2nvw_A 40 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSS-LQTIEQ-------LQLKH--ATGFDSLESFAQYKDI 109 (479)
T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHH-HHHHHH-------TTCTT--CEEESCHHHHHHCTTC
T ss_pred CEEEEEcccCCCCHHHHHHHHHHHhcCCCeEEEEEEeCCHHHH-HHHHHH-------cCCCc--ceeeCCHHHHhcCCCC
Confidence 57999999 99999999987433 378865 778876432 222221 12111 123578999996 68
Q ss_pred CEEEEccCC
Q 016620 238 DVISLHPVL 246 (386)
Q Consensus 238 DiVvl~lPl 246 (386)
|+|++|+|.
T Consensus 110 D~V~I~tp~ 118 (479)
T 2nvw_A 110 DMIVVSVKV 118 (479)
T ss_dssp SEEEECSCH
T ss_pred CEEEEcCCc
Confidence 999999994
No 328
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=95.58 E-value=0.021 Score=54.56 Aligned_cols=96 Identities=14% Similarity=0.155 Sum_probs=61.2
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh----hCC
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR----EAD 238 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~----~aD 238 (386)
-.|.+|.|+|.|.||...++.+ +.+|++|++.+++..... + .++.+..........++.+.+. ..|
T Consensus 165 ~~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~~i~~~~~~~~~~~~~~~g~~d 234 (340)
T 3s2e_A 165 RPGQWVVISGIGGLGHVAVQYA-RAMGLRVAAVDIDDAKLN--L-------ARRLGAEVAVNARDTDPAAWLQKEIGGAH 234 (340)
T ss_dssp CTTSEEEEECCSTTHHHHHHHH-HHTTCEEEEEESCHHHHH--H-------HHHTTCSEEEETTTSCHHHHHHHHHSSEE
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCCHHHHH--H-------HHHcCCCEEEeCCCcCHHHHHHHhCCCCC
Confidence 3688999999999999999985 789999999998765421 1 1222322111111224433332 578
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+|+.+... +++ -...++.++++..++.++-
T Consensus 235 ~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 235 GVLVTAVS-PKA----FSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp EEEESSCC-HHH----HHHHHHHEEEEEEEEECSC
T ss_pred EEEEeCCC-HHH----HHHHHHHhccCCEEEEeCC
Confidence 88887753 221 1456677888888888753
No 329
>1lc0_A Biliverdin reductase A; oxidoreductase, tetrapyrrole, bIle pigment, heme, bilirubin, NADH; 1.20A {Rattus norvegicus} SCOP: c.2.1.3 d.81.1.4 PDB: 1lc3_A* 1gcu_A 2h63_A*
Probab=95.56 E-value=0.03 Score=52.71 Aligned_cols=103 Identities=21% Similarity=0.202 Sum_probs=62.0
Q ss_pred CeEEEEecChhHHHHHHHHHh---cCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCE
Q 016620 166 QTVGVIGAGRIGSAYARMMVE---GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADV 239 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~---~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDi 239 (386)
.+|||||+|.||+..++.+.+ .-++++. ++|++... +. .+ .. +.+++++++ +.|+
T Consensus 8 ~rvgiIG~G~iG~~~~~~l~~~~~~~~~~lvav~d~~~~a-------------~~---~g--~~-~~~~~ell~~~~vD~ 68 (294)
T 1lc0_A 8 FGVVVVGVGRAGSVRLRDLKDPRSAAFLNLIGFVSRRELG-------------SL---DE--VR-QISLEDALRSQEIDV 68 (294)
T ss_dssp EEEEEECCSHHHHHHHHHHTSHHHHTTEEEEEEECSSCCC-------------EE---TT--EE-BCCHHHHHHCSSEEE
T ss_pred ceEEEEEEcHHHHHHHHHHhccccCCCEEEEEEECchHHH-------------HH---cC--CC-CCCHHHHhcCCCCCE
Confidence 479999999999999887633 2366765 56654211 00 01 11 368999997 6799
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCc-EEEEc-CCCcccCHHHHHHHHHcCCcc
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEA-ILVNC-SRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~ga-ilIN~-aRg~~vde~aL~~aL~~g~i~ 292 (386)
|++++|.. +.. +-....++.|. +++.- ---.+-+-++|.++.++..+.
T Consensus 69 V~i~tp~~--~H~---~~~~~al~aGkhVl~EKPla~~~~ea~~l~~~a~~~g~~ 118 (294)
T 1lc0_A 69 AYICSESS--SHE---DYIRQFLQAGKHVLVEYPMTLSFAAAQELWELAAQKGRV 118 (294)
T ss_dssp EEECSCGG--GHH---HHHHHHHHTTCEEEEESCSCSCHHHHHHHHHHHHHTTCC
T ss_pred EEEeCCcH--hHH---HHHHHHHHCCCcEEEeCCCCCCHHHHHHHHHHHHHhCCE
Confidence 99999952 222 22223344454 66653 112334557778777665443
No 330
>2d4a_B Malate dehydrogenase; archaea, hyperthermophIle, oxidoreductase; 2.87A {Aeropyrum pernix}
Probab=95.54 E-value=0.017 Score=55.04 Aligned_cols=76 Identities=17% Similarity=0.246 Sum_probs=44.9
Q ss_pred eEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
+|+|+|.|.+|.++|..++. .|. +|..+|...........+....... .. .........+. +.+++||+|+++.+
T Consensus 1 KI~IiGaG~vG~~~a~~l~~-~~l~el~L~Di~~~~~~g~~~dl~~~~~~-~~-~~~~i~~t~d~-~a~~~aD~Vi~~ag 76 (308)
T 2d4a_B 1 MITILGAGKVGMATAVMLMM-RGYDDLLLIARTPGKPQGEALDLAHAAAE-LG-VDIRISGSNSY-EDMRGSDIVLVTAG 76 (308)
T ss_dssp CEEEECCSHHHHHHHHHHHH-HTCSCEEEECSSTTHHHHHHHHHHHHHHH-HT-CCCCEEEESCG-GGGTTCSEEEECCS
T ss_pred CEEEECcCHHHHHHHHHHHh-CCCCEEEEEcCChhhHHHHHHHHHHhhhh-cC-CCeEEEECCCH-HHhCCCCEEEEeCC
Confidence 58999999999999987743 244 6999998754321111111000000 01 11122222455 57899999999966
Q ss_pred C
Q 016620 246 L 246 (386)
Q Consensus 246 l 246 (386)
.
T Consensus 77 ~ 77 (308)
T 2d4a_B 77 I 77 (308)
T ss_dssp C
T ss_pred C
Confidence 4
No 331
>3k92_A NAD-GDH, NAD-specific glutamate dehydrogenase; ROCG, oxidoreductase; 2.30A {Bacillus subtilis} PDB: 3k8z_A
Probab=95.53 E-value=0.14 Score=50.75 Aligned_cols=114 Identities=18% Similarity=0.259 Sum_probs=71.4
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCCh---------hhHHHHHHhhhhhhhhhcCC-CCccccccCC
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQ---------ATRLEKFVTAYGQFLKANGE-QPVTWKRASS 229 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~---------~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 229 (386)
.++.|+||.|-|+|++|+..|+.| ...|++|+ +.|.+. ...+.++. ...+. .... ....+
T Consensus 217 ~~l~g~~vaVqG~GnVG~~aa~~l-~e~GakVVavsD~~G~iyd~~GlD~~~l~~~~-------~~~g~i~~~~-a~~~~ 287 (424)
T 3k92_A 217 IKLQNARIIIQGFGNAGSFLAKFM-HDAGAKVIGISDANGGLYNPDGLDIPYLLDKR-------DSFGMVTNLF-TDVIT 287 (424)
T ss_dssp CCGGGCEEEEECCSHHHHHHHHHH-HHHTCEEEEEECSSCEEECTTCCCHHHHHHHC-------CSSSCCGGGC-SCCBC
T ss_pred CCcccCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHH-------HHhCCCCCCC-cEEec
Confidence 469999999999999999999997 57899986 445441 11111110 11110 0000 11224
Q ss_pred HHHHh-hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016620 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 230 l~ell-~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 291 (386)
-++++ ..||+++=|.. .+.|+.+...+++ -.+++-.+-+++- .+-.+.|.+..|
T Consensus 288 ~~~i~~~~~DIliPcA~-----~n~I~~~~a~~l~-ak~V~EgAN~p~t--~eA~~iL~~rGI 342 (424)
T 3k92_A 288 NEELLEKDCDILVPAAI-----SNQITAKNAHNIQ-ASIVVERANGPTT--IDATKILNERGV 342 (424)
T ss_dssp HHHHHHSCCSEEEECSC-----SSCBCTTTGGGCC-CSEEECCSSSCBC--HHHHHHHHHTTC
T ss_pred CccceeccccEEeecCc-----ccccChhhHhhcC-ceEEEcCCCCCCC--HHHHHHHHHCCC
Confidence 45544 57999987765 4667777777774 5588888999863 333466666554
No 332
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=95.52 E-value=0.017 Score=55.82 Aligned_cols=97 Identities=18% Similarity=0.077 Sum_probs=61.6
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccC-CHHHHh-hhCCEEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS-SMDEVL-READVIS 241 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~ell-~~aDiVv 241 (386)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..... + +++.+.......... ++.+.+ ...|+|+
T Consensus 179 ~g~~VlV~GaG~vG~~~~qla-k~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~v~~~~~~~~~~~~~~~~~D~vi 248 (360)
T 1piw_A 179 PGKKVGIVGLGGIGSMGTLIS-KAMGAETYVISRSSRKRE--D-------AMKMGADHYIATLEEGDWGEKYFDTFDLIV 248 (360)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSSTTHH--H-------HHHHTCSEEEEGGGTSCHHHHSCSCEEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEcCCHHHHH--H-------HHHcCCCEEEcCcCchHHHHHhhcCCCEEE
Confidence 578999999999999999985 789999999997654421 1 111222111111112 333322 4689999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.+...++ ... -...++.++++..++.++.
T Consensus 249 d~~g~~~--~~~-~~~~~~~l~~~G~iv~~g~ 277 (360)
T 1piw_A 249 VCASSLT--DID-FNIMPKAMKVGGRIVSISI 277 (360)
T ss_dssp ECCSCST--TCC-TTTGGGGEEEEEEEEECCC
T ss_pred ECCCCCc--HHH-HHHHHHHhcCCCEEEEecC
Confidence 9987521 011 1345677888989998865
No 333
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=95.52 E-value=0.023 Score=51.16 Aligned_cols=102 Identities=11% Similarity=0.110 Sum_probs=61.3
Q ss_pred cCCCeEEEEe-cChhHHHHHHHHHhcCC-cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC--ccccccCCHHHHhhhCC
Q 016620 163 LKGQTVGVIG-AGRIGSAYARMMVEGFK-MNLIYYDLYQATRLEKFVTAYGQFLKANGEQP--VTWKRASSMDEVLREAD 238 (386)
Q Consensus 163 l~g~~vgIvG-~G~IG~~iA~~L~~~fg-~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~l~ell~~aD 238 (386)
...++|.|.| .|.||+.+++.| ..-| .+|++++|+...... +...+... .......+++++++.+|
T Consensus 21 ~~mk~vlVtGatG~iG~~l~~~L-~~~G~~~V~~~~R~~~~~~~---------~~~~~~~~~~~Dl~d~~~~~~~~~~~D 90 (236)
T 3qvo_A 21 GHMKNVLILGAGGQIARHVINQL-ADKQTIKQTLFARQPAKIHK---------PYPTNSQIIMGDVLNHAALKQAMQGQD 90 (236)
T ss_dssp -CCEEEEEETTTSHHHHHHHHHH-TTCTTEEEEEEESSGGGSCS---------SCCTTEEEEECCTTCHHHHHHHHTTCS
T ss_pred CcccEEEEEeCCcHHHHHHHHHH-HhCCCceEEEEEcChhhhcc---------cccCCcEEEEecCCCHHHHHHHhcCCC
Confidence 3457899999 599999999998 4778 899999987653110 00000000 00111234667889999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCC-C-cEEEEcCCCcc
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKK-E-AILVNCSRGPV 276 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~-g-ailIN~aRg~~ 276 (386)
+|+.+...... .......+..|++ + ..||++|....
T Consensus 91 ~vv~~a~~~~~--~~~~~~~~~~~~~~~~~~iV~iSS~~~ 128 (236)
T 3qvo_A 91 IVYANLTGEDL--DIQANSVIAAMKACDVKRLIFVLSLGI 128 (236)
T ss_dssp EEEEECCSTTH--HHHHHHHHHHHHHTTCCEEEEECCCCC
T ss_pred EEEEcCCCCch--hHHHHHHHHHHHHcCCCEEEEEeccee
Confidence 99988764332 1122344555532 2 47888887443
No 334
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=95.51 E-value=0.072 Score=46.07 Aligned_cols=73 Identities=12% Similarity=0.076 Sum_probs=47.4
Q ss_pred CCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc--cccccCCHHHHhhhCCEEE
Q 016620 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVIS 241 (386)
Q Consensus 165 g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiVv 241 (386)
+++|.|.|. |.||+.+++.|+ .-|.+|++.+|+...... ....+.... ......++.++++.+|+|+
T Consensus 3 ~~~ilVtGatG~iG~~l~~~l~-~~g~~V~~~~r~~~~~~~---------~~~~~~~~~~~D~~~~~~~~~~~~~~d~vi 72 (206)
T 1hdo_A 3 VKKIAIFGATGQTGLTTLAQAV-QAGYEVTVLVRDSSRLPS---------EGPRPAHVVVGDVLQAADVDKTVAGQDAVI 72 (206)
T ss_dssp CCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCGGGSCS---------SSCCCSEEEESCTTSHHHHHHHHTTCSEEE
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-HCCCeEEEEEeChhhccc---------ccCCceEEEEecCCCHHHHHHHHcCCCEEE
Confidence 478999998 999999999984 678999999987643100 000000000 0011234567788999999
Q ss_pred EccCCC
Q 016620 242 LHPVLD 247 (386)
Q Consensus 242 l~lPlt 247 (386)
.+....
T Consensus 73 ~~a~~~ 78 (206)
T 1hdo_A 73 VLLGTR 78 (206)
T ss_dssp ECCCCT
T ss_pred ECccCC
Confidence 887653
No 335
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=95.51 E-value=0.022 Score=53.72 Aligned_cols=105 Identities=18% Similarity=0.146 Sum_probs=65.4
Q ss_pred CCeEEEEec-ChhHHHHHHHHHhcCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEE
Q 016620 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVI 240 (386)
Q Consensus 165 g~~vgIvG~-G~IG~~iA~~L~~~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiV 240 (386)
..+|.|+|+ |++|+.+++.+ +..|.++ ...+|.... ..-.+...+.+++|+.. ..|++
T Consensus 7 ~~~VaVvGasG~~G~~~~~~l-~~~g~~~v~~VnP~~~g-----------------~~i~G~~vy~sl~el~~~~~~Dv~ 68 (288)
T 1oi7_A 7 ETRVLVQGITGREGQFHTKQM-LTYGTKIVAGVTPGKGG-----------------MEVLGVPVYDTVKEAVAHHEVDAS 68 (288)
T ss_dssp TCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTT-----------------CEETTEEEESSHHHHHHHSCCSEE
T ss_pred CCEEEEECCCCCHHHHHHHHH-HHcCCeEEEEECCCCCC-----------------ceECCEEeeCCHHHHhhcCCCCEE
Confidence 467999999 99999999987 4568874 366664310 00012233578999988 89999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC-cccCHHHHHHHHHcCCc
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSRG-PVIDEVALVEHLKQNPM 291 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg-~~vde~aL~~aL~~g~i 291 (386)
++++|. +.+...+ ++..+. +-. .+|..+.| ..-+++.|.++.++..+
T Consensus 69 Ii~vp~-~~~~~~~-~ea~~~-Gi~-~vVi~t~G~~~~~~~~l~~~a~~~gi 116 (288)
T 1oi7_A 69 IIFVPA-PAAADAA-LEAAHA-GIP-LIVLITEGIPTLDMVRAVEEIKALGS 116 (288)
T ss_dssp EECCCH-HHHHHHH-HHHHHT-TCS-EEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred EEecCH-HHHHHHH-HHHHHC-CCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 999994 2333333 333331 222 24555555 22345688888876544
No 336
>2xxj_A L-LDH, L-lactate dehydrogenase; oxidoreductase, hyperthermophIle; HET: NAD; 1.964A {Thermus thermophilus} PDB: 2xxb_A* 3zzn_A* 2v7p_A* 2e37_A* 2v6m_A* 2xxe_A 4a73_A
Probab=95.48 E-value=0.029 Score=53.49 Aligned_cols=103 Identities=22% Similarity=0.247 Sum_probs=57.8
Q ss_pred CeEEEEecChhHHHHHHHHHh-cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMVE-GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~-~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|+|.|.+|.+++..|+. +..-++..+|...........+.-+. . ... .+.... ..+ .+.++.||+|+++.
T Consensus 1 ~KI~IiGaG~vG~~~a~~l~~~~~~~el~L~Di~~~k~~g~a~dl~~~-~-~~~-~~~~v~-~~~-~~a~~~aD~Vii~a 75 (310)
T 2xxj_A 1 MKVGIVGSGMVGSATAYALALLGVAREVVLVDLDRKLAQAHAEDILHA-T-PFA-HPVWVW-AGS-YGDLEGARAVVLAA 75 (310)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHTT-G-GGS-CCCEEE-ECC-GGGGTTEEEEEECC
T ss_pred CEEEEECCCHHHHHHHHHHHhCCCCCEEEEEeCChhHHHHHHHHHHHh-H-hhc-CCeEEE-ECC-HHHhCCCCEEEECC
Confidence 479999999999999987753 23358999998754321111111000 0 001 112222 233 56789999999997
Q ss_pred CCChh---h--------hhccc--HHHHhcCCCCcEEEEcCC
Q 016620 245 VLDKT---T--------YHLIN--KERLATMKKEAILVNCSR 273 (386)
Q Consensus 245 Plt~~---t--------~~li~--~~~~~~mk~gailIN~aR 273 (386)
+.... + ..++. .+.+....|.+++++++-
T Consensus 76 g~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~iiv~tN 117 (310)
T 2xxj_A 76 GVAQRPGETRLQLLDRNAQVFAQVVPRVLEAAPEAVLLVATN 117 (310)
T ss_dssp CCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CCCCCCCcCHHHHHHhhHHHHHHHHHHHHHHCCCcEEEEecC
Confidence 64322 1 11110 012222368899999844
No 337
>3cmc_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; microspectrophotometry, reaction intermediate, dehydrogenase phosphate binding site; HET: G3H NAD; 1.77A {Bacillus stearothermophilus} SCOP: c.2.1.3 d.81.1.1 PDB: 2gd1_O 1gd1_O* 1npt_O* 1nqa_O* 1nqo_O* 1nq5_O* 2dbv_O* 1dbv_O* 3dbv_O* 4dbv_O*
Probab=95.46 E-value=0.017 Score=55.83 Aligned_cols=32 Identities=25% Similarity=0.410 Sum_probs=25.2
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEEcCC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~ 198 (386)
+|||+|+|.||+.+.|.|...-.++|.+.+..
T Consensus 3 kVgI~G~G~iGr~l~R~l~~~~~veivain~~ 34 (334)
T 3cmc_O 3 KVGINGFGRIGRNVFRAALKNPDIEVVAVNDL 34 (334)
T ss_dssp EEEEESCSHHHHHHHHHHTTCTTEEEEEEECS
T ss_pred EEEEECCCHHHHHHHHHHhCCCCeEEEEEeCC
Confidence 79999999999999998743336788766543
No 338
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.46 E-value=0.06 Score=52.13 Aligned_cols=95 Identities=18% Similarity=0.120 Sum_probs=61.1
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc--cCCHHHHhh-----
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (386)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..... + .++.+........ ..++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~~~~~~~~~~ 260 (374)
T 2jhf_A 191 QGSTCAVFGLGGVGLSVIMGC-KAAGAARIIGVDINKDKFA--K-------AKEVGATECVNPQDYKKPIQEVLTEMSNG 260 (374)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--H-------HHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--H-------HHHhCCceEecccccchhHHHHHHHHhCC
Confidence 688999999999999999985 78999 8999987765421 1 1222221111111 123444333
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~g-ailIN~aR 273 (386)
..|+|+-+... +++ -...++.++++ ..++.++-
T Consensus 261 g~D~vid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 261 GVDFSFEVIGR-LDT----MVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHHBCTTTCEEEECSC
T ss_pred CCcEEEECCCC-HHH----HHHHHHHhhcCCcEEEEecc
Confidence 47999988864 222 14567778888 88888764
No 339
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=95.44 E-value=0.029 Score=52.01 Aligned_cols=108 Identities=17% Similarity=0.206 Sum_probs=63.3
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc----cccccCCHHHHhh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV----TWKRASSMDEVLR 235 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~ell~ 235 (386)
..+.||++.|.|. |.||+++|+.|+ .-|++|+..+++.....+...+. +...+.... ......+++++++
T Consensus 27 ~~l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~~~~~~~~~----l~~~~~~~~~~~~Dv~d~~~v~~~~~ 101 (271)
T 3v2g_A 27 ISLAGKTAFVTGGSRGIGAAIAKRLA-LEGAAVALTYVNAAERAQAVVSE----IEQAGGRAVAIRADNRDAEAIEQAIR 101 (271)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHH----HHHTTCCEEEEECCTTCHHHHHHHHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCCHHHHHHHHHH----HHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 3589999999986 789999999985 68999998866554333322111 111111100 0011122334444
Q ss_pred -------hCCEEEEccCCChh------h----h-----h-----cccHHHHhcCCCCcEEEEcCC
Q 016620 236 -------EADVISLHPVLDKT------T----Y-----H-----LINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 -------~aDiVvl~lPlt~~------t----~-----~-----li~~~~~~~mk~gailIN~aR 273 (386)
..|+++.+.-.... + . + .+.+..+..|+++..+||++.
T Consensus 102 ~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS 166 (271)
T 3v2g_A 102 ETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGS 166 (271)
T ss_dssp HHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeC
Confidence 67999887643210 0 0 1 123445677888888888876
No 340
>4aj2_A L-lactate dehydrogenase A chain; oxidoreductase-inhibitor complex, fragment-based LEAD genera inhibitors; HET: 52C; 1.75A {Rattus norvegicus} PDB: 4aj1_A* 4aje_A* 4ajh_A* 4aji_A* 4ajj_A* 4ajk_A* 4ajl_A* 4ajn_A* 4ajo_A* 4al4_A* 4aj4_A* 4ajp_A* 1i10_A* 3h3f_A* 9ldt_A* 9ldb_A* 1t2f_A* 1i0z_A* 5ldh_A* 1ldm_A* ...
Probab=95.42 E-value=0.031 Score=53.89 Aligned_cols=105 Identities=11% Similarity=0.179 Sum_probs=61.1
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcC-CC-CccccccCCHHHHhhhC
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANG-EQ-PVTWKRASSMDEVLREA 237 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~l~ell~~a 237 (386)
....++|+|+|.|.||..+|..|+ ..|. ++..+|.........-.+. .... .. ........+.+ .+++|
T Consensus 16 ~~~~~kV~ViGaG~vG~~~a~~l~-~~~~~~el~L~Di~~~~~~g~a~DL-----~~~~~~~~~~~i~~~~d~~-~~~~a 88 (331)
T 4aj2_A 16 QVPQNKITVVGVGAVGMACAISIL-MKDLADELALVDVIEDKLKGEMMDL-----QHGSLFLKTPKIVSSKDYS-VTANS 88 (331)
T ss_dssp -CCSSEEEEECCSHHHHHHHHHHH-HTTCCSEEEEECSCHHHHHHHHHHH-----HHTGGGCSCCEEEECSSGG-GGTTE
T ss_pred cCCCCEEEEECCCHHHHHHHHHHH-hCCCCceEEEEeCChHHHHHHHHhh-----hhhhhccCCCeEEEcCCHH-HhCCC
Confidence 456789999999999999998764 3344 8999998754322111111 1110 00 11112234555 58999
Q ss_pred CEEEEccCCCh---hhh-hcccH---------HHHhcCCCCcEEEEcCC
Q 016620 238 DVISLHPVLDK---TTY-HLINK---------ERLATMKKEAILVNCSR 273 (386)
Q Consensus 238 DiVvl~lPlt~---~t~-~li~~---------~~~~~mk~gailIN~aR 273 (386)
|+|+++..... .|+ .++.. +.+....|.+++++++-
T Consensus 89 DiVvi~aG~~~kpG~tR~dL~~~N~~I~~~i~~~i~~~~p~a~vlvvtN 137 (331)
T 4aj2_A 89 KLVIITAGARQQEGESRLNLVQRNVNIFKFIIPNVVKYSPQCKLLIVSN 137 (331)
T ss_dssp EEEEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTCEEEECSS
T ss_pred CEEEEccCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHCCCeEEEEecC
Confidence 99999864321 122 22211 22333478899999984
No 341
>3on5_A BH1974 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, oxidoreductase; 2.80A {Bacillus halodurans}
Probab=95.42 E-value=0.027 Score=54.89 Aligned_cols=134 Identities=12% Similarity=0.144 Sum_probs=84.2
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
-.++.|+|.|.+|+++|+.+ +.+|++|.++|++..... .+-+..+|-++...
T Consensus 199 ~~~L~I~GaGhva~aLa~la-~~lgf~V~v~D~R~~~~~---------------------------~~~fp~a~~v~~~~ 250 (362)
T 3on5_A 199 KERLIIFGAGPDVPPLVTFA-SNVGFYTVVTDWRPNQCE---------------------------KHFFPDADEIIVDF 250 (362)
T ss_dssp CEEEEEECCSTTHHHHHHHH-HHHTEEEEEEESCGGGGC---------------------------GGGCTTCSEEEESC
T ss_pred CCEEEEECCCHHHHHHHHHH-HHCCCeEEEECCCccccc---------------------------cccCCCceEEecCC
Confidence 35799999999999999985 789999999998764310 01133456555444
Q ss_pred CCChhhhhcccHHHHhc--CCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEe--------eccCCCCCCCCCCCCCCC
Q 016620 245 VLDKTTYHLINKERLAT--MKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGL--------DVFEDEPYMKPGLSEMKN 314 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~--mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaal--------DV~~~EP~~~~~L~~~~n 314 (386)
| .+.+.. +.+++.+|=+.++.-.|...|..+|++. ....++ -.....- ...+
T Consensus 251 p----------~~~~~~~~~~~~t~vvv~TH~h~~D~~~L~~aL~~~-~~YiG~iGSr~R~~rl~~~g~-------~~~r 312 (362)
T 3on5_A 251 P----------ADFLRKFLIRPDDFVLIMTHHFQKDQEILHFLLEKE-LRYIGILGSKERTRRLLQNRK-------PPDH 312 (362)
T ss_dssp H----------HHHHHHSCCCTTCEEEECCSCHHHHHHHHHHHSSSC-CSEEEESSCHHHHHHHHTSCC-------CCTT
T ss_pred H----------HHHHhhcCCCCCeEEEEEeCCchhhHHHHHHHhcCC-CCEEEEeCCHHHHHHHHhcCC-------cHhh
Confidence 4 222333 5677888888888888888888888763 344333 1111110 0112
Q ss_pred eEEcC---CCCCCcHHHHHHHHHHHHHHHHHHHcCCC
Q 016620 315 AIVVP---HIASASKWTREGMATLAALNVLGKIKGYP 348 (386)
Q Consensus 315 vilTP---Hia~~t~~~~~~~~~~~~~ni~~~~~g~~ 348 (386)
+-+| -+++.|++ .++--++..|....+|.+
T Consensus 313 -i~~PIGL~Iga~tP~---EIAvSI~AEiia~~~~~~ 345 (362)
T 3on5_A 313 -LYSPVGLSIDAQGPE---EIAISIVAQLIQLIRSRK 345 (362)
T ss_dssp -EESSCSCCSCCCSHH---HHHHHHHHHHHHHHHHSC
T ss_pred -eECCCCCCCCCCCHH---HHHHHHHHHHHHHHhCCC
Confidence 4444 36777774 455556667777777763
No 342
>3do5_A HOM, homoserine dehydrogenase; NP_069768.1, putative homoserine dehydrogenase, structural G joint center for structural genomics, JCSG; 2.20A {Archaeoglobus fulgidus}
Probab=95.40 E-value=0.036 Score=53.28 Aligned_cols=117 Identities=16% Similarity=0.233 Sum_probs=68.3
Q ss_pred CeEEEEecChhHHHHHHHHHhc--------CCcEEEE-EcCChhhH----HHHHHhhhhhhhhhcCCCCccccccCCHHH
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG--------FKMNLIY-YDLYQATR----LEKFVTAYGQFLKANGEQPVTWKRASSMDE 232 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~--------fg~~V~~-~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 232 (386)
.+|||+|+|.||+.+++.+.+. .+.+|.+ +|++.... ...+... ...... .....++++
T Consensus 3 irvgIiG~G~VG~~~~~~l~~~~~~l~~~g~~~~lvaV~d~~~~~~~~id~~~~~~~----~~~~~~----~~~~~d~~~ 74 (327)
T 3do5_A 3 IKIAIVGFGTVGQGVAELLIRKREEIEKAIGEFKVTAVADSKSSISGDFSLVEALRM----KRETGM----LRDDAKAIE 74 (327)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTHHHHHHHHCCEEEEEEECSSCEEESSCCHHHHHHH----HHHHSS----CSBCCCHHH
T ss_pred EEEEEEeccHHHHHHHHHHHhhHHHHHhcCCCEEEEEEEeCChHhccccCHHHHHhh----hccCcc----ccCCCCHHH
Confidence 3799999999999999987543 6777664 45543211 0111110 000000 000238899
Q ss_pred Hhhh--CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCccc-CHHHHHHHHHcCCc
Q 016620 233 VLRE--ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVI-DEVALVEHLKQNPM 291 (386)
Q Consensus 233 ll~~--aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~v-de~aL~~aL~~g~i 291 (386)
++.+ .|+|+.|+|....+.. .-+-....++.|.-++...-+.+. +-+.|.++.++...
T Consensus 75 ll~~~~iDvVv~~tp~~~h~~~-a~~~~~~aL~aGkhVv~~NKkpla~~~~eL~~~A~~~g~ 135 (327)
T 3do5_A 75 VVRSADYDVLIEASVTRVDGGE-GVNYIREALKRGKHVVTSNKGPLVAEFHGLMSLAERNGV 135 (327)
T ss_dssp HHHHSCCSEEEECCCCC----C-HHHHHHHHHTTTCEEEECCSHHHHHHHHHHHHHHHHTTC
T ss_pred HhcCCCCCEEEECCCCcccchh-HHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHhhCC
Confidence 9864 8999999996432212 123345567788777776555543 56778887776654
No 343
>2dt5_A AT-rich DNA-binding protein; REX, NADH, NAD, rossmann fold, redox sensing, winged helix, themophilus; HET: NAD; 2.16A {Thermus thermophilus} SCOP: a.4.5.38 c.2.1.12 PDB: 1xcb_A* 3ikt_A* 3ikv_A 3il2_A*
Probab=95.40 E-value=0.011 Score=53.33 Aligned_cols=67 Identities=15% Similarity=0.212 Sum_probs=44.4
Q ss_pred CeEEEEecChhHHHHHHHH-HhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-hCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMM-VEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-EADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L-~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-~aDiVvl 242 (386)
.+|+|+|+|.+|+.+++.+ ... |+++. ++|.++...- .. ..+..+....+++++++ +.|+|++
T Consensus 81 ~rV~IIGaG~~G~~la~~~~~~~-g~~iVg~~D~dp~k~g-----------~~--i~gv~V~~~~dl~ell~~~ID~ViI 146 (211)
T 2dt5_A 81 WGLCIVGMGRLGSALADYPGFGE-SFELRGFFDVDPEKVG-----------RP--VRGGVIEHVDLLPQRVPGRIEIALL 146 (211)
T ss_dssp EEEEEECCSHHHHHHHHCSCCCS-SEEEEEEEESCTTTTT-----------CE--ETTEEEEEGGGHHHHSTTTCCEEEE
T ss_pred CEEEEECccHHHHHHHHhHhhcC-CcEEEEEEeCCHHHHh-----------hh--hcCCeeecHHhHHHHHHcCCCEEEE
Confidence 4799999999999999852 134 78866 4566543310 00 11122223567889886 5899999
Q ss_pred ccCC
Q 016620 243 HPVL 246 (386)
Q Consensus 243 ~lPl 246 (386)
|+|.
T Consensus 147 A~Ps 150 (211)
T 2dt5_A 147 TVPR 150 (211)
T ss_dssp CSCH
T ss_pred eCCc
Confidence 9994
No 344
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=95.39 E-value=0.012 Score=57.36 Aligned_cols=38 Identities=26% Similarity=0.503 Sum_probs=34.3
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.+.+++|+|+|.|.+|+.+++.+ +.+|++|+++|+++.
T Consensus 9 ~~~~~~IlIlG~G~lg~~la~aa-~~lG~~viv~d~~~~ 46 (377)
T 3orq_A 9 LKFGATIGIIGGGQLGKMMAQSA-QKMGYKVVVLDPSED 46 (377)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCTT
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCC
Confidence 46899999999999999999996 789999999998754
No 345
>3v5n_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati nysgrc, NEW YORK structural genomics research consortium; 2.80A {Sinorhizobium meliloti}
Probab=95.38 E-value=0.13 Score=50.88 Aligned_cols=72 Identities=15% Similarity=0.170 Sum_probs=47.7
Q ss_pred CeEEEEecCh---hHHHHHHHHHhcCCcEEE--EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh----
Q 016620 166 QTVGVIGAGR---IGSAYARMMVEGFKMNLI--YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE---- 236 (386)
Q Consensus 166 ~~vgIvG~G~---IG~~iA~~L~~~fg~~V~--~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~---- 236 (386)
.+|||||+|. ||+..+..+...-++++. ++|++.... +++.+.| +... ...+.+++++++.
T Consensus 38 ~rvgiiG~G~~~~ig~~h~~~~~~~~~~~lva~v~d~~~~~a-~~~a~~~-------g~~~--~~~~~~~~~ll~~~~~~ 107 (417)
T 3v5n_A 38 IRLGMVGGGSGAFIGAVHRIAARLDDHYELVAGALSSTPEKA-EASGREL-------GLDP--SRVYSDFKEMAIREAKL 107 (417)
T ss_dssp EEEEEESCC--CHHHHHHHHHHHHTSCEEEEEEECCSSHHHH-HHHHHHH-------TCCG--GGBCSCHHHHHHHHHHC
T ss_pred ceEEEEcCCCchHHHHHHHHHHhhCCCcEEEEEEeCCCHHHH-HHHHHHc-------CCCc--ccccCCHHHHHhccccc
Confidence 4799999999 999988876433346765 568876542 2222221 2211 1245799999987
Q ss_pred ---CCEEEEccCCC
Q 016620 237 ---ADVISLHPVLD 247 (386)
Q Consensus 237 ---aDiVvl~lPlt 247 (386)
.|+|++|+|..
T Consensus 108 ~~~vD~V~I~tp~~ 121 (417)
T 3v5n_A 108 KNGIEAVAIVTPNH 121 (417)
T ss_dssp TTCCSEEEECSCTT
T ss_pred CCCCcEEEECCCcH
Confidence 99999999964
No 346
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=95.37 E-value=0.073 Score=51.57 Aligned_cols=95 Identities=17% Similarity=0.056 Sum_probs=61.5
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc--CCHHHHhh-----
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLR----- 235 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~----- 235 (386)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..... + .++.+......... .++.+.+.
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~v~~~~~~ 264 (376)
T 1e3i_A 195 PGSTCAVFGLGCVGLSAIIGC-KIAGASRIIAIDINGEKFP--K-------AKALGATDCLNPRELDKPVQDVITELTAG 264 (376)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCGGGHH--H-------HHHTTCSEEECGGGCSSCHHHHHHHHHTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--H-------HHHhCCcEEEccccccchHHHHHHHHhCC
Confidence 688999999999999999985 78999 8999988765421 1 12223221111111 23444332
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~g-ailIN~aR 273 (386)
..|+|+-+... +++ -...++.++++ ..++.++-
T Consensus 265 g~Dvvid~~G~-~~~----~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 265 GVDYSLDCAGT-AQT----LKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp CBSEEEESSCC-HHH----HHHHHHTBCTTTCEEEECCC
T ss_pred CccEEEECCCC-HHH----HHHHHHHhhcCCCEEEEECC
Confidence 47999988863 221 14567888888 88888764
No 347
>4fcc_A Glutamate dehydrogenase; protein complex, rossmann fold, metabolic role, NAD, NADP, oxidoreductase; 2.00A {Escherichia coli O157} PDB: 4fhn_X 2yfg_A 3sbo_A 2yfg_E
Probab=95.36 E-value=0.091 Score=52.50 Aligned_cols=119 Identities=13% Similarity=0.141 Sum_probs=69.3
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCCh--------h--hHHHHHHhhhh-------hhhhhcCCCCcc
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQ--------A--TRLEKFVTAYG-------QFLKANGEQPVT 223 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~--------~--~~~~~~~~~~~-------~~~~~~~~~~~~ 223 (386)
.++.|+||.|-|+|++|+..|+.| ...|++|++.+.+. - ..+....+.-. ...++.+. .
T Consensus 231 ~~l~Gk~vaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~i~d~~Gid~e~l~~l~e~k~~~~g~v~~~~~~~g~---~ 306 (450)
T 4fcc_A 231 MGFEGMRVSVSGSGNVAQYAIEKA-MEFGARVITASDSSGTVVDESGFTKEKLARLIEIKSSRDGRVADYAKEFGL---V 306 (450)
T ss_dssp CCSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHHTSTTCCHHHHHHHHTC---E
T ss_pred CCcCCCEEEEeCCChHHHHHHHHH-HhcCCeEEEEecCCceEEeCCCCCHHHHHHHHHHhcccCCccccccccCCc---E
Confidence 469999999999999999999998 58999998754221 0 01111100000 00000000 0
Q ss_pred ccccCCHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCC--cEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 224 WKRASSMDEVLREADVISLHPVLDKTTYHLINKERLATMKKE--AILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 224 ~~~~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~g--ailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
.....++ +-..|||.+=|. +.+.|+.+...+++.. .++++.+-+.+-.+. .+.|.+..|.
T Consensus 307 ~~~~~~i--~~~~~DI~iPcA-----l~~~I~~~~a~~L~a~g~k~IaEgAN~p~t~eA--~~iL~~rGIl 368 (450)
T 4fcc_A 307 YLEGQQP--WSVPVDIALPCA-----TQNELDVDAAHQLIANGVKAVAEGANMPTTIEA--TELFQQAGVL 368 (450)
T ss_dssp EEETCCG--GGSCCSEEEECS-----CTTCBCHHHHHHHHHTTCCEEECCSSSCBCHHH--HHHHHHTTCE
T ss_pred EecCccc--ccCCccEEeecc-----ccccccHHHHHHHHhcCceEEecCCCCCCCHHH--HHHHHHCCCE
Confidence 0011111 124689988775 3567888888877643 578888888864433 3556665443
No 348
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=95.35 E-value=0.0094 Score=55.97 Aligned_cols=39 Identities=18% Similarity=0.172 Sum_probs=35.3
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
..+.|++|.|||.|.+|...++.| ...|++|.++++...
T Consensus 9 ~~l~~k~VLVVGgG~va~rka~~L-l~~Ga~VtViap~~~ 47 (274)
T 1kyq_A 9 HQLKDKRILLIGGGEVGLTRLYKL-MPTGCKLTLVSPDLH 47 (274)
T ss_dssp ECCTTCEEEEEEESHHHHHHHHHH-GGGTCEEEEEEEEEC
T ss_pred EEcCCCEEEEECCcHHHHHHHHHH-HhCCCEEEEEcCCCC
Confidence 568999999999999999999998 689999999998654
No 349
>3cps_A Glyceraldehyde 3-phosphate dehydrogenase; GAPDH, glycolysis, malaria, structural genomics; HET: NAD; 1.90A {Cryptosporidium parvum iowa II} PDB: 1vsv_A* 1vsu_A* 3chz_A 3cie_A* 3cif_A* 3sth_A*
Probab=95.34 E-value=0.045 Score=53.19 Aligned_cols=100 Identities=18% Similarity=0.262 Sum_probs=54.7
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEcC-ChhhHHHHHHhhhhhhhhhcCCC----------------CccccccC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYDL-YQATRLEKFVTAYGQFLKANGEQ----------------PVTWKRAS 228 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~-~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~~~~~ 228 (386)
.+|||+|+|.||+.+.|.|...-.++|.+.+. ........+.-.|++. .+.. ........
T Consensus 18 ikVgI~G~G~iGr~llR~l~~~p~veivaindp~~~~~~~a~ll~~ds~---hg~~~~~v~~~~~~l~v~g~~i~v~~~~ 94 (354)
T 3cps_A 18 GTLGINGFGRIGRLVLRACMERNDITVVAINDPFMDVEYMAYLLKYDSV---HGNFNGTVEVSGKDLCINGKVVKVFQAK 94 (354)
T ss_dssp CEEEEECCSHHHHHHHHHHHTCSSCEEEEEECTTSCHHHHHHHHHCCTT---TCSCSSCEEECC-CEEETTEEEEEECCS
T ss_pred eEEEEECCCHHHHHHHHHHHcCCCeEEEEecCCCCChhHhhhhhccccc---CCCCCCcEEEeCCEEEECCeEEEEEecC
Confidence 38999999999999999874323678776653 3322111111111111 0111 00111112
Q ss_pred CHHHHh---hhCCEEEEccCCChhhhhcccHHHHhcCCCCc--EEEEcCC
Q 016620 229 SMDEVL---READVISLHPVLDKTTYHLINKERLATMKKEA--ILVNCSR 273 (386)
Q Consensus 229 ~l~ell---~~aDiVvl~lPlt~~t~~li~~~~~~~mk~ga--ilIN~aR 273 (386)
+.+++- ..+|+|+.|+|.... . +..-..++.|+ ++|+.+-
T Consensus 95 dp~~i~w~~~~vDvV~eatg~~~s-~----e~a~~~l~~GakkvVId~pa 139 (354)
T 3cps_A 95 DPAEIPWGASGAQIVCESTGVFTT-E----EKASLHLKGGAKKVIISAPP 139 (354)
T ss_dssp CGGGCCHHHHTCCEEEECSSSCCS-H----HHHGGGGTTTCSEEEESSCC
T ss_pred ChHHCCcccCCCCEEEECCCchhh-H----HHHHHHHHcCCcEEEEeCCC
Confidence 444432 579999999995332 1 22223456788 8888754
No 350
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=95.33 E-value=0.067 Score=51.35 Aligned_cols=96 Identities=16% Similarity=0.092 Sum_probs=61.5
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc--cCCHHHH---h----
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEV---L---- 234 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~el---l---- 234 (386)
.|++|.|+|.|.+|...++.+ +.+|++|++.+++..... + +++.+........ ....+++ .
T Consensus 168 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 168 LGTTVLVIGAGPIGLVSVLAA-KAYGAFVVCTARSPRRLE--V-------AKNCGADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESCHHHHH--H-------HHHTTCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEcCCHHHHH--H-------HHHhCCCEEEcCcccccHHHHHHHHhcccc
Confidence 578999999999999999985 789999999988765421 1 1122221111001 1112222 2
Q ss_pred -hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 235 -READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 235 -~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
...|+|+-+.... .+ -...++.++++..++.++.+
T Consensus 238 g~g~D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~G~~ 273 (352)
T 1e3j_A 238 GDLPNVTIDCSGNE-KC----ITIGINITRTGGTLMLVGMG 273 (352)
T ss_dssp SSCCSEEEECSCCH-HH----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCCCEEEECCCCH-HH----HHHHHHHHhcCCEEEEEecC
Confidence 2489999988642 11 14567788999999988753
No 351
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=95.33 E-value=0.072 Score=46.97 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=57.8
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc--cccccCCHHHHhhhCCEEEE
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVISL 242 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiVvl 242 (386)
++|.|.|. |.||+.+++.|+ .-|.+|++.+|+....... ...+.... .... .+. +.+..+|+|+.
T Consensus 1 MkilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~---------~~~~~~~~~~D~~d-~~~-~~~~~~d~vi~ 68 (224)
T 3h2s_A 1 MKIAVLGATGRAGSAIVAEAR-RRGHEVLAVVRDPQKAADR---------LGATVATLVKEPLV-LTE-ADLDSVDAVVD 68 (224)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHHHHHH---------TCTTSEEEECCGGG-CCH-HHHTTCSEEEE
T ss_pred CEEEEEcCCCHHHHHHHHHHH-HCCCEEEEEEecccccccc---------cCCCceEEeccccc-ccH-hhcccCCEEEE
Confidence 46899997 999999999984 6799999999986542210 00010000 0011 112 67889999998
Q ss_pred ccCCC--h---hhhhcccHHHHhcCC-CCcEEEEcCCC
Q 016620 243 HPVLD--K---TTYHLINKERLATMK-KEAILVNCSRG 274 (386)
Q Consensus 243 ~lPlt--~---~t~~li~~~~~~~mk-~gailIN~aRg 274 (386)
+.... + ...-......+..|+ .|..+|++|..
T Consensus 69 ~ag~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 69 ALSVPWGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp CCCCCTTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred CCccCCCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 88653 1 111112234556664 34677777653
No 352
>3lk7_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; agalacitae, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: MSE; 1.50A {Streptococcus agalactiae}
Probab=95.31 E-value=0.014 Score=58.52 Aligned_cols=120 Identities=19% Similarity=0.130 Sum_probs=72.1
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh-CCEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE-ADVI 240 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~-aDiV 240 (386)
++.|++|.|||+|..|.++|+.| +..|.+|.++|.......+ .. +.++..+. .+..-...++++.. +|+|
T Consensus 6 ~~~~k~v~viG~G~sG~s~A~~l-~~~G~~V~~~D~~~~~~~~-~~----~~L~~~gi---~~~~g~~~~~~~~~~~d~v 76 (451)
T 3lk7_A 6 TFENKKVLVLGLARSGEAAARLL-AKLGAIVTVNDGKPFDENP-TA----QSLLEEGI---KVVCGSHPLELLDEDFCYM 76 (451)
T ss_dssp TTTTCEEEEECCTTTHHHHHHHH-HHTTCEEEEEESSCGGGCH-HH----HHHHHTTC---EEEESCCCGGGGGSCEEEE
T ss_pred hcCCCEEEEEeeCHHHHHHHHHH-HhCCCEEEEEeCCcccCCh-HH----HHHHhCCC---EEEECCChHHhhcCCCCEE
Confidence 47899999999999999999987 6899999999986421100 00 11222222 12111223345666 8999
Q ss_pred EEccCCChhhh----------hcccH-HHHhc-CCCCcEEEEcCCCcccCHHHHHHHHHcCC
Q 016620 241 SLHPVLDKTTY----------HLINK-ERLAT-MKKEAILVNCSRGPVIDEVALVEHLKQNP 290 (386)
Q Consensus 241 vl~lPlt~~t~----------~li~~-~~~~~-mk~gailIN~aRg~~vde~aL~~aL~~g~ 290 (386)
++..-..+++. .++.+ +.+.+ ++...+-|--+.|+.--..-|...|+...
T Consensus 77 v~spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~IaVTGTnGKTTTt~ml~~iL~~~g 138 (451)
T 3lk7_A 77 IKNPGIPYNNPMVKKALEKQIPVLTEVELAYLVSESQLIGITGSNGKTTTTTMIAEVLNAGG 138 (451)
T ss_dssp EECTTSCTTSHHHHHHHHTTCCEECHHHHHHHHCCSEEEEEECSSCHHHHHHHHHHHHHHTT
T ss_pred EECCcCCCCChhHHHHHHCCCcEEeHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhcC
Confidence 88743322211 24444 33333 34444556667788766666677777544
No 353
>3hhp_A Malate dehydrogenase; MDH, citric acid cycle, TCA cycle, NAD, oxidoreductase, tricarboxylic acid cycle; 1.45A {Escherichia coli k-12} PDB: 2pwz_A 2cmd_A* 1emd_A* 1ib6_A* 1ie3_A* 4e0b_A*
Probab=95.31 E-value=0.075 Score=50.70 Aligned_cols=109 Identities=23% Similarity=0.257 Sum_probs=64.6
Q ss_pred CeEEEEe-cChhHHHHHHHHHh--cCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc--CCHHHHhhhCCEE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVE--GFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLREADVI 240 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~--~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~~aDiV 240 (386)
++|+|+| .|.+|+++|..|+. .+.-++..+|..... .....+ +... ........+ .+..+.+++||+|
T Consensus 1 mKV~IiGAaG~VG~~~a~~L~~~~~~~~el~L~Di~~~~-~G~a~D-----l~~~-~~~~~v~~~~~~~~~~~~~~aDiv 73 (312)
T 3hhp_A 1 MKVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVT-PGVAVD-----LSHI-PTAVKIKGFSGEDATPALEGADVV 73 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHSCTTEEEEEECSSTTH-HHHHHH-----HHTS-CSSEEEEEECSSCCHHHHTTCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHhCCCCCceEEEEecCCCc-hhHHHH-----hhCC-CCCceEEEecCCCcHHHhCCCCEE
Confidence 4799999 89999999998754 366789999987521 111111 1111 111122111 2567889999999
Q ss_pred EEccCCCh---hhh-hcc--cH-------HHHhcCCCCcEEEEcCCCcccCHHHHH
Q 016620 241 SLHPVLDK---TTY-HLI--NK-------ERLATMKKEAILVNCSRGPVIDEVALV 283 (386)
Q Consensus 241 vl~lPlt~---~t~-~li--~~-------~~~~~mk~gailIN~aRg~~vde~aL~ 283 (386)
+++.+... .|+ .++ |. +.+....|.+++++++ ..+|.-..+
T Consensus 74 ii~ag~~rkpG~~R~dll~~N~~I~~~i~~~i~~~~p~a~vlvvt--NPvd~~t~~ 127 (312)
T 3hhp_A 74 LISAGVARKPGMDRSDLFNVNAGIVKNLVQQVAKTCPKACIGIIT--NPVNTTVAI 127 (312)
T ss_dssp EECCSCSCCTTCCHHHHHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHHHH
T ss_pred EEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEec--CcchhHHHH
Confidence 99875321 122 122 11 1222335788999995 566665554
No 354
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=95.31 E-value=0.026 Score=53.48 Aligned_cols=94 Identities=14% Similarity=0.105 Sum_probs=64.0
Q ss_pred cCCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC-HHHHhhhCCEE
Q 016620 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS-MDEVLREADVI 240 (386)
Q Consensus 163 l~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-l~ell~~aDiV 240 (386)
-.|.+|.|+| .|.+|...++.+ +.+|++|++.++..+ .++. ++.+..........+ +.+.+...|+|
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a-~~~Ga~vi~~~~~~~---~~~~-------~~lGa~~~i~~~~~~~~~~~~~g~D~v 219 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLA-KQKGTTVITTASKRN---HAFL-------KALGAEQCINYHEEDFLLAISTPVDAV 219 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEECHHH---HHHH-------HHHTCSEEEETTTSCHHHHCCSCEEEE
T ss_pred CCCCEEEEEcCCcHHHHHHHHHH-HHcCCEEEEEeccch---HHHH-------HHcCCCEEEeCCCcchhhhhccCCCEE
Confidence 3678999997 999999999985 789999998875332 1211 222332211112234 66666789999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+-++.. .. . ...++.++++..++.++.
T Consensus 220 ~d~~g~----~~-~-~~~~~~l~~~G~iv~~g~ 246 (321)
T 3tqh_A 220 IDLVGG----DV-G-IQSIDCLKETGCIVSVPT 246 (321)
T ss_dssp EESSCH----HH-H-HHHGGGEEEEEEEEECCS
T ss_pred EECCCc----HH-H-HHHHHhccCCCEEEEeCC
Confidence 998863 11 2 567888999999998864
No 355
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.30 E-value=0.064 Score=51.87 Aligned_cols=95 Identities=18% Similarity=0.091 Sum_probs=61.6
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc--cCCHHHHhh-----
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR----- 235 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~----- 235 (386)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..... + .++.+........ ..++.+.+.
T Consensus 190 ~g~~VlV~GaG~vG~~avqla-~~~Ga~~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~~~v~~~~~~ 259 (373)
T 2fzw_A 190 PGSVCAVFGLGGVGLAVIMGC-KVAGASRIIGVDINKDKFA--R-------AKEFGATECINPQDFSKPIQEVLIEMTDG 259 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGHH--H-------HHHHTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--H-------HHHcCCceEeccccccccHHHHHHHHhCC
Confidence 688999999999999999985 78999 8999987765421 1 1112221111111 023444333
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~g-ailIN~aR 273 (386)
..|+|+-+.... .+ -...++.++++ ..++.++-
T Consensus 260 g~D~vid~~g~~-~~----~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 260 GVDYSFECIGNV-KV----MRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp CBSEEEECSCCH-HH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCEEEECCCcH-HH----HHHHHHhhccCCcEEEEEec
Confidence 479999888642 21 25567888988 88888764
No 356
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=95.29 E-value=0.033 Score=52.23 Aligned_cols=39 Identities=15% Similarity=0.215 Sum_probs=34.1
Q ss_pred cccCCCeEEEEecC---hhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 161 NLLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 161 ~~l~g~~vgIvG~G---~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
..+.||++.|.|.+ .||+++|+.|+ ..|++|+..+++..
T Consensus 26 ~~l~~k~vlVTGasg~~GIG~~ia~~la-~~G~~V~~~~r~~~ 67 (296)
T 3k31_A 26 MLMEGKKGVIIGVANDKSLAWGIAKAVC-AQGAEVALTYLSET 67 (296)
T ss_dssp CTTTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred hccCCCEEEEEeCCCCCCHHHHHHHHHH-HCCCEEEEEeCChH
Confidence 46899999999986 89999999985 78999999998753
No 357
>3d6n_B Aspartate carbamoyltransferase; reactor, chamber, pores, internal cavity, hydrolase, metal-B pyrimidine biosynthesis, hydrolase-transferase; HET: FLC; 2.30A {Aquifex aeolicus}
Probab=95.29 E-value=0.5 Score=44.47 Aligned_cols=119 Identities=12% Similarity=0.017 Sum_probs=73.4
Q ss_pred cEEEEccccccccChhHHhhCCcEEec-CCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCC
Q 016620 88 KAFSNMAVGYNNVDVNAANKYGIAVGN-TPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQ 166 (386)
Q Consensus 88 k~i~~~~~G~d~id~~~~~~~gI~v~n-~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~ 166 (386)
..|+.+.-+-..+....++-.+|+|.| .-|....++ .+++=++.+.+++ | .+.|.
T Consensus 92 D~iviR~~~~~~~~~~la~~~~vPVINAG~g~~~HPt--QaLaDl~Ti~e~~---------------------g-~l~gl 147 (291)
T 3d6n_B 92 DYVVFRVPFVFFPYKEIVKSLNLRLVNAGDGTHQHPS--QGLIDFFTIKEHF---------------------G-EVKDL 147 (291)
T ss_dssp SEEEEEESSCCCSCHHHHHTCSSEEEEEEETTTBCHH--HHHHHHHHHHHHH---------------------S-CCTTC
T ss_pred CEEEEEcCChHHHHHHHHHhCCCCEEeCccCCCcCcH--HHHHHHHHHHHHh---------------------C-CcCCc
Confidence 455555444333432134556799999 334333221 1333333333311 1 38899
Q ss_pred eEEEEec---ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 167 TVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 167 ~vgIvG~---G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
+|+++|= +++..+.+..+ ..||++|.+..|..-. +. + ... .+.....+++|.++++|+|..
T Consensus 148 ~va~vGDl~~~rva~Sl~~~~-~~~g~~v~~~~P~~~~--p~------~-~~~-----~g~~~~~d~~eav~~aDvvy~- 211 (291)
T 3d6n_B 148 RVLYVGDIKHSRVFRSGAPLL-NMFGAKIGVCGPKTLI--PR------D-VEV-----FKVDVFDDVDKGIDWADVVIW- 211 (291)
T ss_dssp EEEEESCCTTCHHHHHHHHHH-HHTTCEEEEESCGGGS--CT------T-GGG-----GCEEEESSHHHHHHHCSEEEE-
T ss_pred EEEEECCCCCCchHHHHHHHH-HHCCCEEEEECCchhC--Cc------h-HHH-----CCCEEEcCHHHHhCCCCEEEE-
Confidence 9999996 89999999987 5799999999874321 00 0 111 113335799999999999998
Q ss_pred cCC
Q 016620 244 PVL 246 (386)
Q Consensus 244 lPl 246 (386)
+-.
T Consensus 212 ~~~ 214 (291)
T 3d6n_B 212 LRL 214 (291)
T ss_dssp CCC
T ss_pred eCc
Confidence 654
No 358
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=95.28 E-value=0.044 Score=52.80 Aligned_cols=96 Identities=19% Similarity=0.159 Sum_probs=61.4
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc---cCCHH-HHh----
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMD-EVL---- 234 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~-ell---- 234 (386)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..... + .++.+........ ..++. ++.
T Consensus 171 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~~i~~~~~ 240 (356)
T 1pl8_A 171 LGHKVLVCGAGPIGMVTLLVA-KAMGAAQVVVTDLSATRLS--K-------AKEIGADLVLQISKESPQEIARKVEGQLG 240 (356)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHHH--H-------HHHTTCSEEEECSSCCHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--H-------HHHhCCCEEEcCcccccchHHHHHHHHhC
Confidence 578999999999999999985 78999 9999998765321 1 1222321110000 01111 221
Q ss_pred hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 235 READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 235 ~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
...|+|+-+.... .+ -...++.++++..++.++-+
T Consensus 241 ~g~D~vid~~g~~-~~----~~~~~~~l~~~G~iv~~G~~ 275 (356)
T 1pl8_A 241 CKPEVTIECTGAE-AS----IQAGIYATRSGGTLVLVGLG 275 (356)
T ss_dssp SCCSEEEECSCCH-HH----HHHHHHHSCTTCEEEECSCC
T ss_pred CCCCEEEECCCCh-HH----HHHHHHHhcCCCEEEEEecC
Confidence 2489999998742 11 14567889999999988753
No 359
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=95.27 E-value=0.028 Score=54.57 Aligned_cols=95 Identities=19% Similarity=0.173 Sum_probs=61.4
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh------
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE------ 236 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~------ 236 (386)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..... + .++.+..........++.+.+.+
T Consensus 182 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~i~~~~~~~~ 251 (370)
T 4ej6_A 182 AGSTVAILGGGVIGLLTVQLA-RLAGATTVILSTRQATKRR--L-------AEEVGATATVDPSAGDVVEAIAGPVGLVP 251 (370)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEECSCHHHHH--H-------HHHHTCSEEECTTSSCHHHHHHSTTSSST
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--H-------HHHcCCCEEECCCCcCHHHHHHhhhhccC
Confidence 578999999999999999985 79999 8999988765421 1 11223222111122345444443
Q ss_pred --CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 --ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 --aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+-+... +++ -...++.++++..++.++-
T Consensus 252 gg~Dvvid~~G~-~~~----~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 252 GGVDVVIECAGV-AET----VKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TCEEEEEECSCC-HHH----HHHHHHHEEEEEEEEECSC
T ss_pred CCCCEEEECCCC-HHH----HHHHHHHhccCCEEEEEec
Confidence 7888888753 222 1456677888888888764
No 360
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=95.25 E-value=0.066 Score=51.81 Aligned_cols=95 Identities=15% Similarity=0.018 Sum_probs=61.7
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc--CCHHHHhh-----
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA--SSMDEVLR----- 235 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~ell~----- 235 (386)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..... + .++.+......... .++.+.+.
T Consensus 191 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~i~~~t~g 260 (373)
T 1p0f_A 191 PGSTCAVFGLGGVGFSAIVGC-KAAGASRIIGVGTHKDKFP--K-------AIELGATECLNPKDYDKPIYEVICEKTNG 260 (373)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEECSCGGGHH--H-------HHHTTCSEEECGGGCSSCHHHHHHHHTTS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHHH--H-------HHHcCCcEEEecccccchHHHHHHHHhCC
Confidence 588999999999999999975 78999 8999987765421 1 12223221111111 23444332
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~g-ailIN~aR 273 (386)
..|+|+-+... +++ -...++.++++ ..++.++-
T Consensus 261 g~Dvvid~~g~-~~~----~~~~~~~l~~~~G~iv~~G~ 294 (373)
T 1p0f_A 261 GVDYAVECAGR-IET----MMNALQSTYCGSGVTVVLGL 294 (373)
T ss_dssp CBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECCC
T ss_pred CCCEEEECCCC-HHH----HHHHHHHHhcCCCEEEEEcc
Confidence 47999988863 222 14567888988 88888764
No 361
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=95.25 E-value=0.055 Score=50.67 Aligned_cols=39 Identities=23% Similarity=0.123 Sum_probs=33.4
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
..+.||++.|.|. |.||+++|+.|+ .-|++|+..+++..
T Consensus 45 ~~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~~~ 84 (294)
T 3r3s_A 45 GRLKDRKALVTGGDSGIGRAAAIAYA-REGADVAINYLPAE 84 (294)
T ss_dssp STTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECCGGG
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCcc
Confidence 4589999999986 889999999985 78999999988643
No 362
>1mld_A Malate dehydrogenase; oxidoreductase(NAD(A)-CHOH(D)); HET: CIT; 1.83A {Sus scrofa} SCOP: c.2.1.5 d.162.1.1 PDB: 2dfd_A*
Probab=95.24 E-value=0.087 Score=50.19 Aligned_cols=105 Identities=22% Similarity=0.317 Sum_probs=61.5
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc---cCCHHHHhhhCCE
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREADV 239 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~aDi 239 (386)
++|+|+|. |.+|..++..|+ ..| -+|..+|........ .+ +... ..+..... ..++++.++.||+
T Consensus 1 mKI~IiGa~G~VG~~la~~L~-~~~~~~ev~L~Di~~~~~~a--~d-----L~~~-~~~~~l~~~~~t~d~~~a~~~aDv 71 (314)
T 1mld_A 1 AKVAVLGASGGIGQPLSLLLK-NSPLVSRLTLYDIAHTPGVA--AD-----LSHI-ETRATVKGYLGPEQLPDCLKGCDV 71 (314)
T ss_dssp CEEEEETTTSTTHHHHHHHHH-TCTTCSEEEEEESSSHHHHH--HH-----HTTS-SSSCEEEEEESGGGHHHHHTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCCcEEEEEeCCccHHHH--HH-----Hhcc-CcCceEEEecCCCCHHHHhCCCCE
Confidence 47999998 999999999875 445 689999987621111 11 1111 11111222 1468888999999
Q ss_pred EEEccCCChh---hh-hcc--c----HH---HHhcCCCCcEEEEcCCCcccCHHH
Q 016620 240 ISLHPVLDKT---TY-HLI--N----KE---RLATMKKEAILVNCSRGPVIDEVA 281 (386)
Q Consensus 240 Vvl~lPlt~~---t~-~li--~----~~---~~~~mk~gailIN~aRg~~vde~a 281 (386)
|+++...... ++ .++ | .+ .+....+.+++++++ ..+|.-.
T Consensus 72 Vvi~ag~~~~~g~~r~dl~~~n~~i~~~i~~~i~~~~p~a~viv~s--NPv~~~~ 124 (314)
T 1mld_A 72 VVIPAGVPRKPGMTRDDLFNTNATIVATLTAACAQHCPDAMICIIS--NPVNSTI 124 (314)
T ss_dssp EEECCSCCCCTTCCGGGGHHHHHHHHHHHHHHHHHHCTTSEEEECS--SCHHHHH
T ss_pred EEECCCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCeEEEEEC--CCcchhH
Confidence 9999753221 11 110 1 11 222234788999974 4666544
No 363
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=95.23 E-value=0.028 Score=53.87 Aligned_cols=94 Identities=16% Similarity=0.124 Sum_probs=60.5
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-----hC
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (386)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..... + .++. ..........++.+.+. ..
T Consensus 164 ~g~~VlV~GaG~vG~~~~q~a-~~~Ga~~Vi~~~~~~~~~~--~-------~~~l-a~~v~~~~~~~~~~~~~~~~~~g~ 232 (343)
T 2dq4_A 164 SGKSVLITGAGPIGLMAAMVV-RASGAGPILVSDPNPYRLA--F-------ARPY-ADRLVNPLEEDLLEVVRRVTGSGV 232 (343)
T ss_dssp TTSCEEEECCSHHHHHHHHHH-HHTTCCSEEEECSCHHHHG--G-------GTTT-CSEEECTTTSCHHHHHHHHHSSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--H-------HHHh-HHhccCcCccCHHHHHHHhcCCCC
Confidence 789999999999999999985 78999 8999998764321 0 1111 11000011124444333 47
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+|+-+....+ + -...++.++++..++.++.
T Consensus 233 D~vid~~g~~~-~----~~~~~~~l~~~G~iv~~g~ 263 (343)
T 2dq4_A 233 EVLLEFSGNEA-A----IHQGLMALIPGGEARILGI 263 (343)
T ss_dssp EEEEECSCCHH-H----HHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCCHH-H----HHHHHHHHhcCCEEEEEec
Confidence 88888886311 1 1456677888888888764
No 364
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=95.22 E-value=0.15 Score=51.43 Aligned_cols=109 Identities=12% Similarity=0.090 Sum_probs=68.8
Q ss_pred ccccCCCeEEEEecC----------hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhh---hhhcCCCCccccc
Q 016620 160 GNLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQF---LKANGEQPVTWKR 226 (386)
Q Consensus 160 g~~l~g~~vgIvG~G----------~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 226 (386)
+..+.|++|+|+|+- +-...+++.| ...|++|.+|||........ .|+.. +.... . ....
T Consensus 323 ~~~~~~~~v~vlGlafK~~~dD~R~Sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~~---~~~~~~~~~~~~~-~--~~~~ 395 (478)
T 2y0c_A 323 GEDLTGRTFAIWGLAFKPNTDDMREAPSRELIAEL-LSRGARIAAYDPVAQEEARR---VIALDLADHPSWL-E--RLSF 395 (478)
T ss_dssp CSCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECTTTHHHHHH---HHHHHTTTCHHHH-T--TEEE
T ss_pred cccCCCCEEEEEecccCCCCCccccChHHHHHHHH-HHCCCEEEEECCCccHHHHH---hhccccccccccc-c--ceee
Confidence 346899999999984 3567889988 68999999999986442211 11100 00000 0 0123
Q ss_pred cCCHHHHhhhCCEEEEccCCChhhhhcccHHHH-hcCCCCcEEEEcCCCcccCHH
Q 016620 227 ASSMDEVLREADVISLHPVLDKTTYHLINKERL-ATMKKEAILVNCSRGPVIDEV 280 (386)
Q Consensus 227 ~~~l~ell~~aDiVvl~lPlt~~t~~li~~~~~-~~mk~gailIN~aRg~~vde~ 280 (386)
..++++.++.||+|++++.-. +-+. ++-+.+ +.|+ +.+++|+ |+ +.|.+
T Consensus 396 ~~~~~~~~~~ad~~vi~t~~~-~f~~-~~~~~~~~~~~-~~~i~D~-r~-~~~~~ 445 (478)
T 2y0c_A 396 VDDEAQAARDADALVIVTEWK-IFKS-PDFVALGRLWK-TPVIFDG-RN-LYEPE 445 (478)
T ss_dssp CSSHHHHTTTCSEEEECSCCG-GGGS-CCHHHHHTTCS-SCEEEES-SC-CSCHH
T ss_pred cCCHHHHHhCCCEEEEecCCh-Hhhc-cCHHHHHhhcC-CCEEEEC-CC-CCCHH
Confidence 467889999999999999863 3333 344444 4565 4788887 43 44544
No 365
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=95.22 E-value=0.05 Score=51.35 Aligned_cols=98 Identities=12% Similarity=0.078 Sum_probs=57.7
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.+|+|+| +|.||+.+++.+.+.-++++. ++|+........ + ...-.+..+.++....++++++..+|+|+-+
T Consensus 22 irV~V~Ga~GrMGr~i~~~v~~~~~~eLvg~vd~~~~~~~G~--d----~gel~G~~~~gv~v~~dl~~ll~~aDVvIDF 95 (288)
T 3ijp_A 22 MRLTVVGANGRMGRELITAIQRRKDVELCAVLVRKGSSFVDK--D----ASILIGSDFLGVRITDDPESAFSNTEGILDF 95 (288)
T ss_dssp EEEEESSTTSHHHHHHHHHHHTCSSEEEEEEBCCTTCTTTTS--B----GGGGTTCSCCSCBCBSCHHHHTTSCSEEEEC
T ss_pred eEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCcccccc--c----hHHhhccCcCCceeeCCHHHHhcCCCEEEEc
Confidence 4799999 999999999987555688866 447653210000 0 0001121222333457999999999999987
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
.+ |+.. .+..-..++.|.-+|-.+.|
T Consensus 96 T~--p~a~---~~~~~~~l~~Gv~vViGTTG 121 (288)
T 3ijp_A 96 SQ--PQAS---VLYANYAAQKSLIHIIGTTG 121 (288)
T ss_dssp SC--HHHH---HHHHHHHHHHTCEEEECCCC
T ss_pred CC--HHHH---HHHHHHHHHcCCCEEEECCC
Confidence 75 3321 11122234556666665566
No 366
>1cf2_P Protein (glyceraldehyde-3-phosphate dehydrogenase); oxydoreductase, oxidoreductase; HET: NAP; 2.10A {Methanothermus fervidus} SCOP: c.2.1.3 d.81.1.1
Probab=95.20 E-value=0.022 Score=55.03 Aligned_cols=76 Identities=20% Similarity=0.263 Sum_probs=43.9
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEE-cCChhhH--HHHHH--hhhhh------hhhhcCCCCccccccCCHHHHhh
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYY-DLYQATR--LEKFV--TAYGQ------FLKANGEQPVTWKRASSMDEVLR 235 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~-d~~~~~~--~~~~~--~~~~~------~~~~~~~~~~~~~~~~~l~ell~ 235 (386)
+|||+|+|.||+.+++.|...-++++.+. |+..... ...+. ..|+. .....+ ..+ ..+.++++.
T Consensus 3 kVgIiGaG~iG~~l~r~L~~~~~~elvav~d~~~~~~~~~~~~~g~~~~~~~~~~v~~~~~~~---l~v--~~~~~~~~~ 77 (337)
T 1cf2_P 3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMALKKGYDLYVAIPERVKLFEKAG---IEV--AGTVDDMLD 77 (337)
T ss_dssp EEEEECCSTTHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHHHTTCCEEESSGGGHHHHHHTT---CCC--CEEHHHHHH
T ss_pred EEEEEeECHHHHHHHHHHHcCCCcEEEEEEcCChhHHHHhcCCcchhhccccccceeeecCCc---eEE--cCCHHHHhc
Confidence 79999999999999998753357887654 4432211 11100 00000 000000 000 125678888
Q ss_pred hCCEEEEccCCC
Q 016620 236 EADVISLHPVLD 247 (386)
Q Consensus 236 ~aDiVvl~lPlt 247 (386)
.+|+|+.|+|..
T Consensus 78 ~vDvV~~atp~~ 89 (337)
T 1cf2_P 78 EADIVIDCTPEG 89 (337)
T ss_dssp TCSEEEECCSTT
T ss_pred CCCEEEECCCch
Confidence 999999999964
No 367
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.20 E-value=0.024 Score=54.43 Aligned_cols=92 Identities=17% Similarity=0.126 Sum_probs=62.0
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..... + +++.+..... .+.+++.+..|+|+-+
T Consensus 176 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~v~----~~~~~~~~~~D~vid~ 241 (348)
T 3two_A 176 KGTKVGVAGFGGLGSMAVKYA-VAMGAEVSVFARNEHKKQ--D-------ALSMGVKHFY----TDPKQCKEELDFIIST 241 (348)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHTTCEEEEECSSSTTHH--H-------HHHTTCSEEE----SSGGGCCSCEEEEEEC
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCeEEEEeCCHHHHH--H-------HHhcCCCeec----CCHHHHhcCCCEEEEC
Confidence 688999999999999999985 789999999987765421 1 1222322111 2223333368999888
Q ss_pred cCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 244 PVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 244 lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
..... .-...++.++++..++.++..
T Consensus 242 ~g~~~-----~~~~~~~~l~~~G~iv~~G~~ 267 (348)
T 3two_A 242 IPTHY-----DLKDYLKLLTYNGDLALVGLP 267 (348)
T ss_dssp CCSCC-----CHHHHHTTEEEEEEEEECCCC
T ss_pred CCcHH-----HHHHHHHHHhcCCEEEEECCC
Confidence 87431 124567788888888888653
No 368
>3grf_A Ornithine carbamoyltransferase; ornithine transcarbamoylase, arginine degradation pathway, giardia lamblia, drug target; 2.00A {Giardia intestinalis}
Probab=95.17 E-value=0.79 Score=43.89 Aligned_cols=165 Identities=12% Similarity=0.092 Sum_probs=91.5
Q ss_pred cEEEEccccccccChhHHhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCe
Q 016620 88 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQT 167 (386)
Q Consensus 88 k~i~~~~~G~d~id~~~~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~ 167 (386)
..|+.+.-+-..+. ..++-.+|+|.|.-.....++ .+++=++.+.+++.. ..+ ....+.|.+
T Consensus 102 D~iviR~~~~~~~~-~lA~~~~vPVINag~~~~HPt--QaLaDl~Ti~e~~g~----------~~~-----~~~~l~gl~ 163 (328)
T 3grf_A 102 DICTARLATKEMMR-EMAQHASVPCINALDDFGHPL--QMVCDFMTIKEKFTA----------AGE-----FSNGFKGIK 163 (328)
T ss_dssp SEEEEECSSHHHHH-HHHHHCSSCEEESSCSSCCHH--HHHHHHHHHHHHHHH----------TTC-----CTTTGGGCC
T ss_pred CEEEEecCChhHHH-HHHHhCCCCEEeCCCCCCCcH--HHHHHHHHHHHHhCC----------ccc-----cccccCCcE
Confidence 45555543322222 234556799999765433222 234434444443210 000 113589999
Q ss_pred EEEEecC--hhHHHHHHHHHhcCCcEEEEEcCChhh--HHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 168 VGVIGAG--RIGSAYARMMVEGFKMNLIYYDLYQAT--RLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 168 vgIvG~G--~IG~~iA~~L~~~fg~~V~~~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
|+++|=| ++..+.+..+ ..||++|.+..|..-. ..+...+...+.....+ .+..+....+++|.++++|+|..-
T Consensus 164 va~vGD~~~~va~Sl~~~~-~~~G~~v~~~~P~~~~~~p~~~~~~~~~~~~~~~~-~g~~v~~~~d~~eav~~aDvvytd 241 (328)
T 3grf_A 164 FAYCGDSMNNVTYDLMRGC-ALLGMECHVCCPDHKDFKPIKEVIDECEEIIAKHG-TGGSIKIFHDCKKGCEGVDVVYTD 241 (328)
T ss_dssp EEEESCCSSHHHHHHHHHH-HHHTCEEEEECCSSGGGSCCHHHHHHHHHHHHHHT-CCCEEEEESSHHHHHTTCSEEEEC
T ss_pred EEEeCCCCcchHHHHHHHH-HHcCCEEEEECChHhhhCCCHHHHHHHHHHHhhcc-CCCeEEEEcCHHHHhcCCCEEEec
Confidence 9999976 7888888876 4789999999875322 11111110000001100 112233457999999999999874
Q ss_pred c----C-CChh--------hhhcccHHHHhcCCCCcEEEEcC
Q 016620 244 P----V-LDKT--------TYHLINKERLATMKKEAILVNCS 272 (386)
Q Consensus 244 l----P-lt~~--------t~~li~~~~~~~mk~gailIN~a 272 (386)
+ - ..++ ...-++.+.++.+|++++|.-+.
T Consensus 242 ~W~sm~iq~er~~~~~~~~~~y~vt~~~l~~a~~~ai~mH~l 283 (328)
T 3grf_A 242 SWMSYHITKEQKEARLKVLTPFQVDDAVMAVTSKRSIFMNCL 283 (328)
T ss_dssp CCC--------CCTHHHHHGGGCBCHHHHTTSCTTCEEEECS
T ss_pred CccccCCcHHHHHHHHHHhcCCCCCHHHHHhcCCCCEEECCC
Confidence 2 2 1110 12347888888889888887663
No 369
>1gad_O D-glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase (aldehyde(D)-NAD+(A)); HET: NAD; 1.80A {Escherichia coli} SCOP: c.2.1.3 d.81.1.1 PDB: 1dc4_A* 1dc3_A 1dc6_A* 1dc5_A* 1s7c_A* 1gae_O* 2vyn_A* 2vyv_A*
Probab=95.16 E-value=0.032 Score=53.72 Aligned_cols=32 Identities=25% Similarity=0.381 Sum_probs=25.9
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEEcCC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDLY 198 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~ 198 (386)
+|||+|+|.||+.+.|.|...-.++|.+.+..
T Consensus 3 kVgI~G~G~iG~~l~R~l~~~~~veiv~i~~~ 34 (330)
T 1gad_O 3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDL 34 (330)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHcCCCeEEEEEcCC
Confidence 79999999999999998754446788777544
No 370
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.15 E-value=0.019 Score=55.79 Aligned_cols=93 Identities=19% Similarity=0.288 Sum_probs=60.4
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHHhhhCCEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (386)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++..... + .++.+.... ....+ .+++....|+|
T Consensus 194 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~Vi~~~~~~~~~~--~-------a~~lGa~~v--i~~~~~~~~~~~~~g~Dvv 261 (369)
T 1uuf_A 194 PGKKVGVVGIGGLGHMGIKLA-HAMGAHVVAFTTSEAKRE--A-------AKALGADEV--VNSRNADEMAAHLKSFDFI 261 (369)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEESSGGGHH--H-------HHHHTCSEE--EETTCHHHHHTTTTCEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--H-------HHHcCCcEE--eccccHHHHHHhhcCCCEE
Confidence 578999999999999999985 789999999998765421 1 111122111 11111 12223467999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+-++..... -...++.++++..++.++.
T Consensus 262 id~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 289 (369)
T 1uuf_A 262 LNTVAAPHN-----LDDFTTLLKRDGTMTLVGA 289 (369)
T ss_dssp EECCSSCCC-----HHHHHTTEEEEEEEEECCC
T ss_pred EECCCCHHH-----HHHHHHHhccCCEEEEecc
Confidence 888864211 2456778888888888865
No 371
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.13 E-value=0.043 Score=52.60 Aligned_cols=95 Identities=14% Similarity=0.145 Sum_probs=62.1
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccc-cccCCHHHHhh-----h
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTW-KRASSMDEVLR-----E 236 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~l~ell~-----~ 236 (386)
.|++|.|+|. |.||..+++.+ +..|++|++.+++.... + . .+..+...... ....++.+.+. .
T Consensus 169 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~V~~~~~~~~~~-~-~-------~~~~g~~~~~d~~~~~~~~~~~~~~~~~~ 238 (347)
T 2hcy_A 169 AGHWVAISGAAGGLGSLAVQYA-KAMGYRVLGIDGGEGKE-E-L-------FRSIGGEVFIDFTKEKDIVGAVLKATDGG 238 (347)
T ss_dssp TTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECSTTHH-H-H-------HHHTTCCEEEETTTCSCHHHHHHHHHTSC
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCcEEEEcCCHHHH-H-H-------HHHcCCceEEecCccHhHHHHHHHHhCCC
Confidence 5789999999 89999999986 68999999999875432 1 1 11112211101 11234554443 4
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+.+....+. -...++.|+++..+|+++.
T Consensus 239 ~D~vi~~~g~~~~-----~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 239 AHGVINVSVSEAA-----IEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp EEEEEECSSCHHH-----HHHHTTSEEEEEEEEECCC
T ss_pred CCEEEECCCcHHH-----HHHHHHHHhcCCEEEEEeC
Confidence 7999888763221 2556778888889998875
No 372
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=95.13 E-value=0.034 Score=51.32 Aligned_cols=110 Identities=16% Similarity=0.225 Sum_probs=64.0
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc----cccccCCHHHHhh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV----TWKRASSMDEVLR 235 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~ell~ 235 (386)
..+.||++.|.|. |.||+++|+.|+ ..|++|++.+++.....+...+. +...+..-. ......+++++++
T Consensus 14 ~~l~~k~~lVTGas~gIG~aia~~l~-~~G~~V~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~Dv~~~~~v~~~~~ 88 (270)
T 3is3_A 14 GRLDGKVALVTGSGRGIGAAVAVHLG-RLGAKVVVNYANSTKDAEKVVSE----IKALGSDAIAIKADIRQVPEIVKLFD 88 (270)
T ss_dssp TCCTTCEEEESCTTSHHHHHHHHHHH-HTTCEEEEEESSCHHHHHHHHHH----HHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred CCcCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCCCHHHHHHHHHH----HHhcCCcEEEEEcCCCCHHHHHHHHH
Confidence 4689999999987 689999999985 78999998776544333222111 111111100 0011122333443
Q ss_pred -------hCCEEEEccCCCh---------hh-h-----h-----cccHHHHhcCCCCcEEEEcCCCc
Q 016620 236 -------EADVISLHPVLDK---------TT-Y-----H-----LINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 236 -------~aDiVvl~lPlt~---------~t-~-----~-----li~~~~~~~mk~gailIN~aRg~ 275 (386)
.-|+++.+.-... +. . + .+.+..+..|+++..+||++...
T Consensus 89 ~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 89 QAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp HHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 5699887754321 10 0 0 12345677888888888887743
No 373
>2yfq_A Padgh, NAD-GDH, NAD-specific glutamate dehydrogenase; oxidoreductase; 2.94A {Peptoniphilus asaccharolyticus}
Probab=95.12 E-value=0.069 Score=53.05 Aligned_cols=117 Identities=17% Similarity=0.191 Sum_probs=65.0
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEE-EcCCh--------------hhHHHHHHhhhhhhhhhcCCCCcccc
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQ--------------ATRLEKFVTAYGQFLKANGEQPVTWK 225 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~-~d~~~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (386)
.++.|++|.|.|+|++|+..|+.| ...|++|+. .|.+. ...+.++.+... .+. ..+ ..
T Consensus 208 ~~l~g~~vaVqG~GnVG~~~a~~L-~~~GakvVavsD~~~~~~~G~i~d~~Gld~~~l~~~~~~~g-~i~---~~~-~a- 280 (421)
T 2yfq_A 208 IKMEDAKIAVQGFGNVGTFTVKNI-ERQGGKVCAIAEWDRNEGNYALYNENGIDFKELLAYKEANK-TLI---GFP-GA- 280 (421)
T ss_dssp CCGGGSCEEEECCSHHHHHHHHHH-HHTTCCEEECCBCCSSSCSBCCBCSSCCCHHHHHHHHHHHC-C------------
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEecCCCccceEEECCCCCCHHHHHHHHHhcC-Ccc---cCC-Cc-
Confidence 468999999999999999999998 579999984 45541 012222111100 000 000 00
Q ss_pred ccCCHHHHh-hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 226 RASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 226 ~~~~l~ell-~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
...+.++++ ..||+++-|.. .+.|+.+....+ +..+++-.+-+++- .+ -.+.|++..+.
T Consensus 281 ~~i~~~~~~~~~~DIliP~A~-----~n~i~~~~A~~l-~ak~VvEgAN~P~t-~e-a~~il~~~GI~ 340 (421)
T 2yfq_A 281 ERITDEEFWTKEYDIIVPAAL-----ENVITGERAKTI-NAKLVCEAANGPTT-PE-GDKVLTERGIN 340 (421)
T ss_dssp --------------CEEECSC-----SSCSCHHHHTTC-CCSEEECCSSSCSC-HH-HHHHHHHHTCE
T ss_pred eEeCccchhcCCccEEEEcCC-----cCcCCcccHHHc-CCeEEEeCCccccC-HH-HHHHHHHCCCE
Confidence 111223332 47999998875 456788887878 46688888988874 22 23445544443
No 374
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=95.12 E-value=0.024 Score=52.42 Aligned_cols=38 Identities=21% Similarity=0.273 Sum_probs=32.9
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.+.|+++.|.|. |.||+++|+.|+ ..|++|+..+|+..
T Consensus 3 ~l~~k~vlVTGas~~~gIG~~~a~~l~-~~G~~V~~~~r~~~ 43 (275)
T 2pd4_A 3 FLKGKKGLIVGVANNKSIAYGIAQSCF-NQGATLAFTYLNES 43 (275)
T ss_dssp TTTTCEEEEECCCSTTSHHHHHHHHHH-TTTCEEEEEESSTT
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEeCCHH
Confidence 378899999997 699999999985 67999999998764
No 375
>3e5r_O PP38, glyceraldehyde-3-phosphate dehydrogenase, cytosolic; GAPDH, RICE, oxidoreductase, cytoplasm, glycolysis, NAD; HET: NAD; 2.30A {Oryza sativa subsp} PDB: 3e6a_O
Probab=95.11 E-value=0.029 Score=54.15 Aligned_cols=31 Identities=29% Similarity=0.504 Sum_probs=24.7
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEEcC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL 197 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~ 197 (386)
+|||+|+|.||+.+++.|...-+++|.+...
T Consensus 5 kVgI~G~GrIGr~l~R~l~~~p~vevvaI~d 35 (337)
T 3e5r_O 5 KIGINGFGRIGRLVARVALQSEDVELVAVND 35 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHhCCCCeEEEEEEC
Confidence 7999999999999999874333678776653
No 376
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.09 E-value=0.031 Score=53.56 Aligned_cols=94 Identities=23% Similarity=0.226 Sum_probs=59.2
Q ss_pred cCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh------
Q 016620 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------ 235 (386)
Q Consensus 163 l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------ 235 (386)
-.|++|.|+|. |.||...++.+ +.+|++|++.+++..... + .++.+........ .++.+.+.
T Consensus 158 ~~g~~VlV~Gasg~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~-------~~~~ga~~v~~~~-~~~~~~v~~~~~~~ 226 (342)
T 4eye_A 158 RAGETVLVLGAAGGIGTAAIQIA-KGMGAKVIAVVNRTAATE--F-------VKSVGADIVLPLE-EGWAKAVREATGGA 226 (342)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSGGGHH--H-------HHHHTCSEEEESS-TTHHHHHHHHTTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHH--H-------HHhcCCcEEecCc-hhHHHHHHHHhCCC
Confidence 36889999998 99999999985 799999999998765421 1 1111221111111 33333221
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+.+.... .-...+..++++..++.++.
T Consensus 227 g~Dvvid~~g~~------~~~~~~~~l~~~G~iv~~G~ 258 (342)
T 4eye_A 227 GVDMVVDPIGGP------AFDDAVRTLASEGRLLVVGF 258 (342)
T ss_dssp CEEEEEESCC--------CHHHHHHTEEEEEEEEEC--
T ss_pred CceEEEECCchh------HHHHHHHhhcCCCEEEEEEc
Confidence 478888887641 23567778888888888753
No 377
>1ys4_A Aspartate-semialdehyde dehydrogenase; oxidoreductase, asadh; HET: NAP; 2.29A {Methanocaldococcus jannaschii}
Probab=95.08 E-value=0.018 Score=55.91 Aligned_cols=101 Identities=13% Similarity=0.198 Sum_probs=51.7
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhh----cCCCCccccccCCHHHHhh-hCCE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKA----NGEQPVTWKRASSMDEVLR-EADV 239 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~ell~-~aDi 239 (386)
.+|+|+| .|.||+.+++.|...-..+|.+..++....-..+.+.++ .+.. .+...... ...+++++++ .+|+
T Consensus 9 ~kV~IiGAtG~iG~~llr~L~~~p~~ev~~i~~s~~~~g~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dv 86 (354)
T 1ys4_A 9 IKVGVLGATGSVGQRFVQLLADHPMFELTALAASERSAGKKYKDACY-WFQDRDIPENIKDMVV-IPTDPKHEEFEDVDI 86 (354)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCSSEEEEEEEECTTTTTSBHHHHSC-CCCSSCCCHHHHTCBC-EESCTTSGGGTTCCE
T ss_pred ceEEEECcCCHHHHHHHHHHhcCCCCEEEEEEcccccccccHHHhcc-cccccccccCceeeEE-EeCCHHHHhcCCCCE
Confidence 4799999 899999999987432346877663211110000101110 0000 00000011 1124455556 8999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|++|+|... +..+ -... .+.|+.+|+.+-
T Consensus 87 V~~atp~~~-~~~~-a~~~---~~aG~~VId~s~ 115 (354)
T 1ys4_A 87 VFSALPSDL-AKKF-EPEF---AKEGKLIFSNAS 115 (354)
T ss_dssp EEECCCHHH-HHHH-HHHH---HHTTCEEEECCS
T ss_pred EEECCCchH-HHHH-HHHH---HHCCCEEEECCc
Confidence 999999522 2221 1222 346788888764
No 378
>1zq6_A Otcase, ornithine carbamoyltransferase; alpha/beta two-domain; HET: AOR; 1.80A {Xanthomonas campestris} PDB: 1yh0_A* 1zq2_A 1yh1_A* 1zq8_A* 3kzc_A* 3kzk_A* 3kzm_A* 3kzn_A* 3kzo_A* 3m4j_A* 3m5d_A* 3m5c_A* 2g6a_A* 3l05_A* 2g65_A* 3l02_A* 3m4n_A* 2g6c_A* 3l06_A* 2g68_A* ...
Probab=95.07 E-value=1.2 Score=43.05 Aligned_cols=138 Identities=13% Similarity=0.157 Sum_probs=79.4
Q ss_pred HhhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCccccc-ccCCCe--EEEEec---C--hh
Q 016620 105 ANKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGN-LLKGQT--VGVIGA---G--RI 176 (386)
Q Consensus 105 ~~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~-~l~g~~--vgIvG~---G--~I 176 (386)
++-.+|+|.|.-... .++ .+|+=++.+.+++ |. .+.|.+ |+++|= | ++
T Consensus 153 A~~~~vPVINag~g~-HPt--QaLaDl~TI~E~~---------------------g~~~l~glkvvva~vGDl~~~~nrv 208 (359)
T 1zq6_A 153 AKYSPVPVINMETIT-HPC--QELAHALALQEHF---------------------GTPDLRGKKYVLTWTYHPKPLNTAV 208 (359)
T ss_dssp HHHCSSCEEESSSSC-CHH--HHHHHHHHHHHHH---------------------TSSCCTTCEEEEEECCCSSCCCSHH
T ss_pred HHhCCCCEEeCCCCC-CcH--HHHHHHHHHHHHh---------------------CCCcccCCeeEEEEEecccccccch
Confidence 455679999976554 332 2333344443321 12 288999 999986 3 89
Q ss_pred HHHHHHHHHhcCCcEEEEEcCC-hhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccCCChh------
Q 016620 177 GSAYARMMVEGFKMNLIYYDLY-QATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPVLDKT------ 249 (386)
Q Consensus 177 G~~iA~~L~~~fg~~V~~~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lPlt~~------ 249 (386)
..+.+..+ ..||++|.+..|. .-...+.+.+...+..+..+ ..+....+++|+++++|+|..-.-..++
T Consensus 209 a~Sl~~~~-~~~G~~v~~~~P~~~~~~~~~~~~~~~~~a~~~g---~~v~~~~d~~eav~~aDvVyt~~w~se~~mg~~~ 284 (359)
T 1zq6_A 209 ANSALTIA-TRMGMDVTLLCPTPDYILDERYMDWAAQNVAESG---GSLQVSHDIDSAYAGADVVYAKSWGALPFFGNWE 284 (359)
T ss_dssp HHHHHHHH-HHTTCEEEEECSSGGGCCCHHHHHHHHHHHHHHS---CEEEEECCHHHHHTTCSEEEEECCCCGGGTTCCT
T ss_pred HHHHHHHH-HHcCCEEEEEcCccccCCCHHHHHHHHHHHHHcC---CeEEEECCHHHHhcCCCEEEECCccccccCCcch
Confidence 99999987 5799999999886 21111111110000001111 2233457999999999999776543210
Q ss_pred ---------hhhcccHHHHhcCCCCcEEEEc
Q 016620 250 ---------TYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 250 ---------t~~li~~~~~~~mk~gailIN~ 271 (386)
....++.+.++.+| +++|.-+
T Consensus 285 ~~~~~~~~~~~y~vt~e~l~~a~-~ai~MHc 314 (359)
T 1zq6_A 285 PEKPIRDQYQHFIVDERKMALTN-NGVFSHC 314 (359)
T ss_dssp THHHHHGGGGGGSBCHHHHHTSS-SCEEECC
T ss_pred hhHHHHHHhcCCCCCHHHHHhCC-CCEEECC
Confidence 01235666666666 6666543
No 379
>1xyg_A Putative N-acetyl-gamma-glutamyl-phosphate reduct; structural genomics, protein structure initiative, CENT eukaryotic structural genomics; 2.19A {Arabidopsis thaliana} SCOP: c.2.1.3 d.81.1.1 PDB: 2q49_A 2cvo_A
Probab=95.07 E-value=0.054 Score=52.68 Aligned_cols=98 Identities=14% Similarity=0.242 Sum_probs=55.0
Q ss_pred CCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 164 ~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
...+|+|+| +|.||+.+++.|...-.+++.+........ .++...++ .+......... ..+ ++.+..+|+|+.
T Consensus 15 ~~~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~~~~~g-~~~~~~~~-~~~~~v~~dl~---~~~-~~~~~~vDvVf~ 88 (359)
T 1xyg_A 15 KDIRIGLLGASGYTGAEIVRLLANHPHFQVTLMTADRKAG-QSMESVFP-HLRAQKLPTLV---SVK-DADFSTVDAVFC 88 (359)
T ss_dssp CCEEEEEECCSSHHHHHHHHHHHTCSSEEEEEEBCSTTTT-SCHHHHCG-GGTTSCCCCCB---CGG-GCCGGGCSEEEE
T ss_pred cCcEEEEECcCCHHHHHHHHHHHcCCCcEEEEEeCchhcC-CCHHHhCc-hhcCcccccce---ecc-hhHhcCCCEEEE
Confidence 346899999 899999999998533345777775433211 11111111 01100000111 112 445678999999
Q ss_pred ccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 243 HPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 243 ~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+|.... .+.....+.|+.+|+.+-
T Consensus 89 atp~~~s------~~~a~~~~aG~~VId~sa 113 (359)
T 1xyg_A 89 CLPHGTT------QEIIKELPTALKIVDLSA 113 (359)
T ss_dssp CCCTTTH------HHHHHTSCTTCEEEECSS
T ss_pred cCCchhH------HHHHHHHhCCCEEEECCc
Confidence 9995332 222222277899999875
No 380
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=95.07 E-value=0.024 Score=54.04 Aligned_cols=97 Identities=18% Similarity=0.087 Sum_probs=61.9
Q ss_pred cCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-----h
Q 016620 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (386)
Q Consensus 163 l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (386)
-.|++|.|+|. |.||..+++.+ +..|++|++.+++...... . .+..+..........++.+.+. .
T Consensus 148 ~~g~~vlI~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~--~------~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 218 (336)
T 4b7c_A 148 KNGETVVISGAAGAVGSVAGQIA-RLKGCRVVGIAGGAEKCRF--L------VEELGFDGAIDYKNEDLAAGLKRECPKG 218 (336)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH--H------HHTTCCSEEEETTTSCHHHHHHHHCTTC
T ss_pred CCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH--H------HHHcCCCEEEECCCHHHHHHHHHhcCCC
Confidence 36889999999 99999999986 7899999999987654211 1 0122221111111123333332 3
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
.|+|+.+... + .-...++.++++..++.++..
T Consensus 219 ~d~vi~~~g~--~----~~~~~~~~l~~~G~iv~~G~~ 250 (336)
T 4b7c_A 219 IDVFFDNVGG--E----ILDTVLTRIAFKARIVLCGAI 250 (336)
T ss_dssp EEEEEESSCH--H----HHHHHHTTEEEEEEEEECCCG
T ss_pred ceEEEECCCc--c----hHHHHHHHHhhCCEEEEEeec
Confidence 7888887752 1 135677788888888888653
No 381
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=95.06 E-value=0.052 Score=50.85 Aligned_cols=39 Identities=21% Similarity=0.202 Sum_probs=33.1
Q ss_pred cccCCCeEEEEec-Ch--hHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 161 NLLKGQTVGVIGA-GR--IGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~--IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
..+.||++.|.|. |. ||+++|+.|+ ..|++|+..+++..
T Consensus 27 ~~l~gk~~lVTGasg~~GIG~aia~~la-~~G~~V~~~~r~~~ 68 (293)
T 3grk_A 27 GLLQGKRGLILGVANNRSIAWGIAKAAR-EAGAELAFTYQGDA 68 (293)
T ss_dssp CTTTTCEEEEECCCSSSSHHHHHHHHHH-HTTCEEEEEECSHH
T ss_pred ccCCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 3589999999998 45 9999999985 68999999998743
No 382
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=95.06 E-value=0.034 Score=52.80 Aligned_cols=67 Identities=10% Similarity=0.024 Sum_probs=46.2
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh---------
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (386)
.+|||||+ |.||+..++.+ +..+.++. ++|++.... .. ... . .....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~--------~~~--~-~~~~~~~~~~~ll~~~~~l~~~ 69 (312)
T 3o9z_A 4 TRFALTGLAGYIAPRHLKAI-KEVGGVLVASLDPATNVG--LV--------DSF--F-PEAEFFTEPEAFEAYLEDLRDR 69 (312)
T ss_dssp CEEEEECTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GG--------GGT--C-TTCEEESCHHHHHHHHHHHHHT
T ss_pred eEEEEECCChHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HH--------Hhh--C-CCCceeCCHHHHHHHhhhhccc
Confidence 47999999 78999999987 45688754 677765431 10 000 0 1123457888887
Q ss_pred -hhCCEEEEccCC
Q 016620 235 -READVISLHPVL 246 (386)
Q Consensus 235 -~~aDiVvl~lPl 246 (386)
.+.|+|++|+|.
T Consensus 70 ~~~vD~V~I~tP~ 82 (312)
T 3o9z_A 70 GEGVDYLSIASPN 82 (312)
T ss_dssp TCCCSEEEECSCG
T ss_pred CCCCcEEEECCCc
Confidence 578999999995
No 383
>2fp4_A Succinyl-COA ligase [GDP-forming] alpha-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.2.1.8 c.23.4.1 PDB: 2fpg_A* 2fpi_A* 2fpp_A* 1euc_A* 1eud_A*
Probab=95.05 E-value=0.066 Score=50.89 Aligned_cols=106 Identities=15% Similarity=0.123 Sum_probs=68.1
Q ss_pred cccCCCeEEEE-ec-ChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--
Q 016620 161 NLLKGQTVGVI-GA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (386)
Q Consensus 161 ~~l~g~~vgIv-G~-G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (386)
.-+..+++.|| |+ |..|+.+++.| +..|.+++ ..+|..... + . .+...+.+++|+..
T Consensus 9 ~l~~~~siaVV~Gasg~~G~~~~~~l-~~~G~~~v~~VnP~~~g~-------------~--i--~G~~vy~sl~el~~~~ 70 (305)
T 2fp4_A 9 LYVDKNTKVICQGFTGKQGTFHSQQA-LEYGTNLVGGTTPGKGGK-------------T--H--LGLPVFNTVKEAKEQT 70 (305)
T ss_dssp GCCCTTCEEEEETTTSHHHHHHHHHH-HHHTCEEEEEECTTCTTC-------------E--E--TTEEEESSHHHHHHHH
T ss_pred HHhCCCcEEEEECCCCCHHHHHHHHH-HHCCCcEEEEeCCCcCcc-------------e--E--CCeeeechHHHhhhcC
Confidence 34667889999 99 99999999987 56788843 566643110 0 0 11223568999988
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCC-cEEEEcCCCcc-cCHHHHHHHHHcC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSRGPV-IDEVALVEHLKQN 289 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~g-ailIN~aRg~~-vde~aL~~aL~~g 289 (386)
..|++++++|. +.....+ ++..+ .| ..+|+.+-|-. -++..|.+.+++.
T Consensus 71 ~vD~avI~vP~-~~~~~~~-~e~i~---~Gi~~iv~~t~G~~~~~~~~l~~~a~~~ 121 (305)
T 2fp4_A 71 GATASVIYVPP-PFAAAAI-NEAID---AEVPLVVCITEGIPQQDMVRVKHRLLRQ 121 (305)
T ss_dssp CCCEEEECCCH-HHHHHHH-HHHHH---TTCSEEEECCCCCCHHHHHHHHHHHTTC
T ss_pred CCCEEEEecCH-HHHHHHH-HHHHH---CCCCEEEEECCCCChHHHHHHHHHHHhc
Confidence 89999999994 2223333 33333 23 24566777643 3445888888876
No 384
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.05 E-value=0.06 Score=52.28 Aligned_cols=96 Identities=18% Similarity=0.100 Sum_probs=61.5
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc--cCCHHHHhh----
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR--ASSMDEVLR---- 235 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~ell~---- 235 (386)
-.|.+|.|+|.|.||...++.+ +..|+ +|++.+++..... + .++.+........ ..++.+.+.
T Consensus 192 ~~g~~VlV~GaG~vG~~a~q~a-~~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~i~~~~~ 261 (378)
T 3uko_A 192 EPGSNVAIFGLGTVGLAVAEGA-KTAGASRIIGIDIDSKKYE--T-------AKKFGVNEFVNPKDHDKPIQEVIVDLTD 261 (378)
T ss_dssp CTTCCEEEECCSHHHHHHHHHH-HHHTCSCEEEECSCTTHHH--H-------HHTTTCCEEECGGGCSSCHHHHHHHHTT
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEEcCCHHHHH--H-------HHHcCCcEEEccccCchhHHHHHHHhcC
Confidence 3688999999999999999985 78999 8999997765421 1 1222322211111 234444333
Q ss_pred -hCCEEEEccCCChhhhhcccHHHHhcCCCC-cEEEEcCC
Q 016620 236 -EADVISLHPVLDKTTYHLINKERLATMKKE-AILVNCSR 273 (386)
Q Consensus 236 -~aDiVvl~lPlt~~t~~li~~~~~~~mk~g-ailIN~aR 273 (386)
..|+|+-+... +++ -...++.++++ ..++.++-
T Consensus 262 gg~D~vid~~g~-~~~----~~~~~~~l~~g~G~iv~~G~ 296 (378)
T 3uko_A 262 GGVDYSFECIGN-VSV----MRAALECCHKGWGTSVIVGV 296 (378)
T ss_dssp SCBSEEEECSCC-HHH----HHHHHHTBCTTTCEEEECSC
T ss_pred CCCCEEEECCCC-HHH----HHHHHHHhhccCCEEEEEcc
Confidence 37999988863 221 24567778885 78887764
No 385
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=94.99 E-value=0.069 Score=46.83 Aligned_cols=96 Identities=11% Similarity=0.077 Sum_probs=57.8
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc--cccccCCHHHHhhhCCEEEE
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREADVISL 242 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~aDiVvl 242 (386)
++|.|.|. |.||+.+++.|+ .-|.+|++.+|+....... . .+.... ..... +. +.+..+|+|+.
T Consensus 1 MkvlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~---------~-~~~~~~~~D~~d~-~~-~~~~~~d~vi~ 67 (221)
T 3ew7_A 1 MKIGIIGATGRAGSRILEEAK-NRGHEVTAIVRNAGKITQT---------H-KDINILQKDIFDL-TL-SDLSDQNVVVD 67 (221)
T ss_dssp CEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCSHHHHHH---------C-SSSEEEECCGGGC-CH-HHHTTCSEEEE
T ss_pred CeEEEEcCCchhHHHHHHHHH-hCCCEEEEEEcCchhhhhc---------c-CCCeEEeccccCh-hh-hhhcCCCEEEE
Confidence 47899995 999999999984 6799999999986542110 0 000000 00111 11 67889999999
Q ss_pred ccCCChhhhh---cccHHHHhcCCC--CcEEEEcCCC
Q 016620 243 HPVLDKTTYH---LINKERLATMKK--EAILVNCSRG 274 (386)
Q Consensus 243 ~lPlt~~t~~---li~~~~~~~mk~--gailIN~aRg 274 (386)
+......... ......+..|++ ...+|.+|..
T Consensus 68 ~ag~~~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~ 104 (221)
T 3ew7_A 68 AYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVGGA 104 (221)
T ss_dssp CCCSSTTTTTSHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred CCcCCccccchHHHHHHHHHHHHHhcCCceEEEEecc
Confidence 8876433211 112345555543 3567777654
No 386
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.97 E-value=0.024 Score=53.21 Aligned_cols=93 Identities=15% Similarity=0.085 Sum_probs=58.0
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc-CCHHHHhhhCCEEE
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLREADVIS 241 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~~aDiVv 241 (386)
.|++|.|+|. |.+|..+++.+ +..|++|++.+++...... .++.+......... .++.+.+...|+|+
T Consensus 125 ~g~~vlV~Ga~G~vG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~---------~~~~ga~~~~~~~~~~~~~~~~~~~d~vi 194 (302)
T 1iz0_A 125 PGEKVLVQAAAGALGTAAVQVA-RAMGLRVLAAASRPEKLAL---------PLALGAEEAATYAEVPERAKAWGGLDLVL 194 (302)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSGGGSHH---------HHHTTCSEEEEGGGHHHHHHHTTSEEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHhcCCCEEEECCcchhHHHHhcCceEEE
Confidence 5789999998 99999999985 7899999999986544211 11122211100011 12333335678888
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
. ... + .-...++.|+++..++.++-
T Consensus 195 d-~g~--~----~~~~~~~~l~~~G~~v~~g~ 219 (302)
T 1iz0_A 195 E-VRG--K----EVEESLGLLAHGGRLVYIGA 219 (302)
T ss_dssp E-CSC--T----THHHHHTTEEEEEEEEEC--
T ss_pred E-CCH--H----HHHHHHHhhccCCEEEEEeC
Confidence 7 653 1 12566777888888887754
No 387
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=94.97 E-value=0.031 Score=53.86 Aligned_cols=95 Identities=15% Similarity=0.141 Sum_probs=61.4
Q ss_pred cCCCeEEEE-ecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-----h
Q 016620 163 LKGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (386)
Q Consensus 163 l~g~~vgIv-G~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (386)
-.|++|.|+ |.|.||..+++.+ +..|++|++.+++...... +++.+..........++.+.+. .
T Consensus 166 ~~g~~VlV~Gg~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~~---------~~~lGa~~~~~~~~~~~~~~~~~~~~~g 235 (353)
T 4dup_A 166 TEGESVLIHGGTSGIGTTAIQLA-RAFGAEVYATAGSTGKCEA---------CERLGAKRGINYRSEDFAAVIKAETGQG 235 (353)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH---------HHHHTCSEEEETTTSCHHHHHHHHHSSC
T ss_pred CCCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH---------HHhcCCCEEEeCCchHHHHHHHHHhCCC
Confidence 368899999 6899999999986 7899999999987654211 1112221111111223433332 4
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+.+... . .-...+..++++..++.++.
T Consensus 236 ~Dvvid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 236 VDIILDMIGA--A----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp EEEEEESCCG--G----GHHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCCH--H----HHHHHHHHhccCCEEEEEEe
Confidence 7888888763 1 12556778888888888764
No 388
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=94.96 E-value=0.078 Score=48.47 Aligned_cols=38 Identities=24% Similarity=0.303 Sum_probs=32.6
Q ss_pred ccCCCeEEEEec-Ch--hHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 162 LLKGQTVGVIGA-GR--IGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~--IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
++.|+++.|.|. |. ||+++|+.|+ ..|++|+..+++..
T Consensus 4 ~l~~k~vlVTGasg~~GIG~~ia~~l~-~~G~~V~~~~r~~~ 44 (266)
T 3oig_A 4 SLEGRNIVVMGVANKRSIAWGIARSLH-EAGARLIFTYAGER 44 (266)
T ss_dssp CCTTCEEEEECCCSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEEcCCCCCcHHHHHHHHHH-HCCCEEEEecCchH
Confidence 588999999997 55 9999999985 67999999988753
No 389
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=94.95 E-value=0.087 Score=48.32 Aligned_cols=39 Identities=15% Similarity=0.236 Sum_probs=33.9
Q ss_pred ccCCCeEEEEecC---hhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 162 LLKGQTVGVIGAG---RIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 162 ~l~g~~vgIvG~G---~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
+|+||++.|-|.+ .||+++|+.|+ ..|++|+..+|+...
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la-~~Ga~Vvi~~r~~~~ 44 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLD-QLGAKLVFTYRKERS 44 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHH-HTTCEEEEEESSGGG
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHH-HCCCEEEEEECCHHH
Confidence 5899999999985 59999999985 789999999987643
No 390
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=94.94 E-value=0.046 Score=51.95 Aligned_cols=95 Identities=20% Similarity=0.114 Sum_probs=61.1
Q ss_pred cCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc-CCHHHHhh-----
Q 016620 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SSMDEVLR----- 235 (386)
Q Consensus 163 l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~ell~----- 235 (386)
-.|++|.|.|. |.||..+++.+ +..|++|++.+++...... .+..+......... .++.+.+.
T Consensus 144 ~~g~~vlV~Ga~ggiG~~~~~~~-~~~G~~V~~~~~~~~~~~~---------~~~~g~~~~~d~~~~~~~~~~~~~~~~~ 213 (333)
T 1v3u_A 144 KGGETVLVSAAAGAVGSVVGQIA-KLKGCKVVGAAGSDEKIAY---------LKQIGFDAAFNYKTVNSLEEALKKASPD 213 (333)
T ss_dssp CSSCEEEEESTTBHHHHHHHHHH-HHTTCEEEEEESSHHHHHH---------HHHTTCSEEEETTSCSCHHHHHHHHCTT
T ss_pred CCCCEEEEecCCCcHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHhcCCcEEEecCCHHHHHHHHHHHhCC
Confidence 36889999998 99999999986 6899999999987543211 11112111101111 34444432
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+.+... .+ -...++.++++..++.++-
T Consensus 214 ~~d~vi~~~g~--~~----~~~~~~~l~~~G~~v~~g~ 245 (333)
T 1v3u_A 214 GYDCYFDNVGG--EF----LNTVLSQMKDFGKIAICGA 245 (333)
T ss_dssp CEEEEEESSCH--HH----HHHHHTTEEEEEEEEECCC
T ss_pred CCeEEEECCCh--HH----HHHHHHHHhcCCEEEEEec
Confidence 36888888762 11 2566788888888888864
No 391
>3oqb_A Oxidoreductase; structural genomics, protein structure INI NEW YORK structural genomix research consortium, NYSGXRC, PSI-2; 2.60A {Bradyrhizobium japonicum}
Probab=94.94 E-value=0.089 Score=51.09 Aligned_cols=70 Identities=13% Similarity=0.147 Sum_probs=45.3
Q ss_pred CeEEEEe-cChhHHH-HH----HHHHhcCCcEE----------EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC
Q 016620 166 QTVGVIG-AGRIGSA-YA----RMMVEGFKMNL----------IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS 229 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~-iA----~~L~~~fg~~V----------~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (386)
.+||||| +|.||+. .+ +.+.+.-+..+ .++|++.... +.+.+.| +.. ..+.+
T Consensus 7 irigiiG~~G~~g~~~h~~~~~~~~~~~~~~~l~~~~~~~~~~av~~~~~~~a-~~~a~~~-------~~~----~~~~~ 74 (383)
T 3oqb_A 7 LGLIMNGVTGRMGLNQHLIRSIVAIRDQGGVRLKNGDRIMPDPILVGRSAEKV-EALAKRF-------NIA----RWTTD 74 (383)
T ss_dssp EEEEEESTTSTHHHHTTTTTTHHHHHHHTSEECTTSCEEEEEEEEECSSSHHH-HHHHHHT-------TCC----CEESC
T ss_pred eEEEEEeccchhhhhhhHHHHHHHHhhcCceeecCCcccceeeEEEcCCHHHH-HHHHHHh-------CCC----cccCC
Confidence 4799999 9999998 66 55533333332 3888876543 2221111 211 13579
Q ss_pred HHHHhhh--CCEEEEccCCC
Q 016620 230 MDEVLRE--ADVISLHPVLD 247 (386)
Q Consensus 230 l~ell~~--aDiVvl~lPlt 247 (386)
+++++++ .|+|++|+|..
T Consensus 75 ~~~ll~~~~iD~V~i~tp~~ 94 (383)
T 3oqb_A 75 LDAALADKNDTMFFDAATTQ 94 (383)
T ss_dssp HHHHHHCSSCCEEEECSCSS
T ss_pred HHHHhcCCCCCEEEECCCch
Confidence 9999976 89999999963
No 392
>3keo_A Redox-sensing transcriptional repressor REX; DNA binding protein, winged helix, rossmann fold, NAD+; HET: NAD; 1.50A {Streptococcus agalactiae serogroup iiiorganism_taxid} PDB: 3keq_A* 3ket_A*
Probab=94.88 E-value=0.021 Score=51.47 Aligned_cols=71 Identities=21% Similarity=0.238 Sum_probs=46.2
Q ss_pred CCeEEEEecChhHHHHHHHHH-hcCCcEEE-EEcCChh-hHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCE
Q 016620 165 GQTVGVIGAGRIGSAYARMMV-EGFKMNLI-YYDLYQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADV 239 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~-~~fg~~V~-~~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDi 239 (386)
..+|+|+|.|++|+.+++.+. ...|+++. ++|.++. .. .. +...+..+....++++++++ .|+
T Consensus 84 ~~~V~IvGaG~lG~aLa~~~~~~~~g~~iVg~~D~dp~~ki-----------G~-~~i~GvpV~~~~dL~~~v~~~~Id~ 151 (212)
T 3keo_A 84 TTNVMLVGCGNIGRALLHYRFHDRNKMQISMAFDLDSNDLV-----------GK-TTEDGIPVYGISTINDHLIDSDIET 151 (212)
T ss_dssp CEEEEEECCSHHHHHHTTCCCCTTSSEEEEEEEECTTSTTT-----------TC-BCTTCCBEEEGGGHHHHC-CCSCCE
T ss_pred CCEEEEECcCHHHHHHHHhhhcccCCeEEEEEEeCCchhcc-----------Cc-eeECCeEEeCHHHHHHHHHHcCCCE
Confidence 347999999999999998621 35688866 4576554 21 00 00112333345788888874 899
Q ss_pred EEEccCCC
Q 016620 240 ISLHPVLD 247 (386)
Q Consensus 240 Vvl~lPlt 247 (386)
+++|+|..
T Consensus 152 vIIAvPs~ 159 (212)
T 3keo_A 152 AILTVPST 159 (212)
T ss_dssp EEECSCGG
T ss_pred EEEecCch
Confidence 99999953
No 393
>4h3v_A Oxidoreductase domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MSE; 1.68A {Kribbella flavida}
Probab=94.87 E-value=0.034 Score=53.67 Aligned_cols=70 Identities=13% Similarity=0.144 Sum_probs=45.2
Q ss_pred CeEEEEecChhHHHHHHHHHh--c-----CCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--
Q 016620 166 QTVGVIGAGRIGSAYARMMVE--G-----FKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-- 235 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~--~-----fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-- 235 (386)
-+|||||+|.||+.-++.+++ . .+++|. ++|++.... +++.+.| +. ...+.+++++++
T Consensus 7 lrvgiIG~G~ig~~h~~~~~~~~~~~~~~~~~~l~av~d~~~~~a-~~~a~~~-------g~----~~~~~d~~~ll~~~ 74 (390)
T 4h3v_A 7 LGIGLIGYAFMGAAHSQAWRSAPRFFDLPLHPDLNVLCGRDAEAV-RAAAGKL-------GW----STTETDWRTLLERD 74 (390)
T ss_dssp EEEEEECHHHHHHHHHHHHHHHHHHSCCSSEEEEEEEECSSHHHH-HHHHHHH-------TC----SEEESCHHHHTTCT
T ss_pred CcEEEEcCCHHHHHHHHHHHhCccccccccCceEEEEEcCCHHHH-HHHHHHc-------CC----CcccCCHHHHhcCC
Confidence 479999999999987766532 1 134544 668876542 2222222 21 123578999996
Q ss_pred hCCEEEEccCCC
Q 016620 236 EADVISLHPVLD 247 (386)
Q Consensus 236 ~aDiVvl~lPlt 247 (386)
+.|+|++|+|..
T Consensus 75 ~iDaV~I~tP~~ 86 (390)
T 4h3v_A 75 DVQLVDVCTPGD 86 (390)
T ss_dssp TCSEEEECSCGG
T ss_pred CCCEEEEeCChH
Confidence 478999999953
No 394
>2yyy_A Glyceraldehyde-3-phosphate dehydrogenase; glyceraldehyde 3-phosphate binding, alpha and beta proteins (A/B) class, MJ1146; HET: NAP; 1.85A {Methanocaldococcus jannaschii}
Probab=94.81 E-value=0.035 Score=53.70 Aligned_cols=31 Identities=26% Similarity=0.216 Sum_probs=24.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEEEc
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIYYD 196 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d 196 (386)
.+|||+|+|.||+.+++.|...-+++|.+..
T Consensus 3 ikVgI~G~G~IGr~v~r~l~~~~~~evvaV~ 33 (343)
T 2yyy_A 3 AKVLINGYGSIGKRVADAVSMQDDMEVIGVT 33 (343)
T ss_dssp EEEEEECCSHHHHHHHHHHHHSSSEEEEEEE
T ss_pred eEEEEECCCHHHHHHHHHHHhCCCceEEEEe
Confidence 3799999999999999987432368876553
No 395
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=94.81 E-value=0.043 Score=53.07 Aligned_cols=95 Identities=14% Similarity=-0.017 Sum_probs=57.0
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh----h--h
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL----R--E 236 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell----~--~ 236 (386)
-.|++|.|+|.|.||...++.+ +.+|++|++.+++..... +. ++.+..........++.+.+ . .
T Consensus 188 ~~g~~VlV~G~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~~-------~~lGa~~vi~~~~~~~~~~v~~~~~g~g 257 (363)
T 3uog_A 188 RAGDRVVVQGTGGVALFGLQIA-KATGAEVIVTSSSREKLD--RA-------FALGADHGINRLEEDWVERVYALTGDRG 257 (363)
T ss_dssp CTTCEEEEESSBHHHHHHHHHH-HHTTCEEEEEESCHHHHH--HH-------HHHTCSEEEETTTSCHHHHHHHHHTTCC
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCEEEEEecCchhHH--HH-------HHcCCCEEEcCCcccHHHHHHHHhCCCC
Confidence 3688999999999999999985 799999999998764421 11 11122111111112332222 1 4
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+-+... ++ -...++.++++..++.++.
T Consensus 258 ~D~vid~~g~--~~----~~~~~~~l~~~G~iv~~G~ 288 (363)
T 3uog_A 258 ADHILEIAGG--AG----LGQSLKAVAPDGRISVIGV 288 (363)
T ss_dssp EEEEEEETTS--SC----HHHHHHHEEEEEEEEEECC
T ss_pred ceEEEECCCh--HH----HHHHHHHhhcCCEEEEEec
Confidence 6777777652 11 2445666777777777653
No 396
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=94.79 E-value=0.068 Score=49.34 Aligned_cols=37 Identities=19% Similarity=0.271 Sum_probs=32.5
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCC
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~ 198 (386)
..+.||++.|.|. |.||+++|+.|+ ..|++|+..+++
T Consensus 6 ~~l~gk~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~~~ 43 (287)
T 3pxx_A 6 GRVQDKVVLVTGGARGQGRSHAVKLA-EEGADIILFDIC 43 (287)
T ss_dssp CTTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECC
T ss_pred cccCCCEEEEeCCCChHHHHHHHHHH-HCCCeEEEEccc
Confidence 3589999999987 789999999985 789999999876
No 397
>2nqt_A N-acetyl-gamma-glutamyl-phosphate reductase; apoprotein, dimer, rossmann fold, structural genomics, PSI, protein structure initiative; 1.58A {Mycobacterium tuberculosis} PDB: 2i3a_A* 2i3g_A
Probab=94.78 E-value=0.11 Score=50.30 Aligned_cols=102 Identities=17% Similarity=0.246 Sum_probs=57.8
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCC------cEEEEEcC-Chh-hHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFK------MNLIYYDL-YQA-TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE 236 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg------~~V~~~d~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~ 236 (386)
.+|+|+| .|.+|+.+.+.|. ..+ .++..+.+ +.. ..... .+ ..+... ....... .+. +.+..
T Consensus 10 ~kVaIvGATG~vG~~llr~L~-~~~~~~~~~~ei~~l~s~~~agk~~~~---~~-~~l~~~--~~~~~~~-~~~-~~~~~ 80 (352)
T 2nqt_A 10 TKVAVAGASGYAGGEILRLLL-GHPAYADGRLRIGALTAATSAGSTLGE---HH-PHLTPL--AHRVVEP-TEA-AVLGG 80 (352)
T ss_dssp EEEEEETTTSHHHHHHHHHHH-TCHHHHTTSEEEEEEEESSCTTSBGGG---TC-TTCGGG--TTCBCEE-CCH-HHHTT
T ss_pred CEEEEECCCCHHHHHHHHHHH-cCCCCCCccEEEEEEECCCcCCCchhh---hc-cccccc--ceeeecc-CCH-HHhcC
Confidence 6899999 9999999999974 444 56666642 211 11110 00 000000 0111111 233 34568
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHH
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVAL 282 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL 282 (386)
+|+|+.|+|... ..+....++.|+.+|+.|.---.+.++.
T Consensus 81 ~DvVf~alg~~~------s~~~~~~~~~G~~vIDlSa~~R~~~~~~ 120 (352)
T 2nqt_A 81 HDAVFLALPHGH------SAVLAQQLSPETLIIDCGADFRLTDAAV 120 (352)
T ss_dssp CSEEEECCTTSC------CHHHHHHSCTTSEEEECSSTTTCSCHHH
T ss_pred CCEEEECCCCcc------hHHHHHHHhCCCEEEEECCCccCCcchh
Confidence 999999999643 3444444467899999876544444343
No 398
>2ozp_A N-acetyl-gamma-glutamyl-phosphate reductase; amino acid biosynthesis, structural genomics, riken structur genomics/proteomics initiative; 2.01A {Thermus thermophilus}
Probab=94.77 E-value=0.047 Score=52.80 Aligned_cols=95 Identities=16% Similarity=0.183 Sum_probs=52.7
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
.+|||+| .|.||+.+.+.|...-..++.+..+..... ..+.+.++ .+. +..... ..++++ +..+|+|+.|+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elv~v~s~~~~g-~~~~~~~~-~~~--g~~~~~---~~~~~~-~~~vDvV~~a~ 76 (345)
T 2ozp_A 5 KTLSIVGASGYAGGEFLRLALSHPYLEVKQVTSRRFAG-EPVHFVHP-NLR--GRTNLK---FVPPEK-LEPADILVLAL 76 (345)
T ss_dssp EEEEEETTTSHHHHHHHHHHHTCTTEEEEEEBCSTTTT-SBGGGTCG-GGT--TTCCCB---CBCGGG-CCCCSEEEECC
T ss_pred CEEEEECCCCHHHHHHHHHHHcCCCcEEEEEECchhhC-chhHHhCc-hhc--Cccccc---ccchhH-hcCCCEEEEcC
Confidence 5799999 799999999998433345776665432211 01111110 000 101111 123334 47899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|.... ..+. ... ++.|+.+|+.|-
T Consensus 77 g~~~s-~~~a-~~~---~~aG~~VId~Sa 100 (345)
T 2ozp_A 77 PHGVF-AREF-DRY---SALAPVLVDLSA 100 (345)
T ss_dssp CTTHH-HHTH-HHH---HTTCSEEEECSS
T ss_pred CcHHH-HHHH-HHH---HHCCCEEEEcCc
Confidence 96432 2221 222 366888998875
No 399
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=94.77 E-value=0.03 Score=55.36 Aligned_cols=78 Identities=13% Similarity=0.087 Sum_probs=48.0
Q ss_pred CeEEEEecChhHHHHHHHHHhcCC---cEEEEEcCChhhHHHHHHhhhhhhhhhcCCC--CccccccCCHHHHhhh--CC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFK---MNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLRE--AD 238 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg---~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ell~~--aD 238 (386)
++|+|+|.|.||+.+++.|+ ..| .+|.+++|+.... ++..+.+.... ..... ........++++++++ +|
T Consensus 2 ~kVlIiGaGgiG~~ia~~L~-~~g~~~~~V~v~~r~~~~~-~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~~~~~D 78 (405)
T 4ina_A 2 AKVLQIGAGGVGGVVAHKMA-MNREVFSHITLASRTLSKC-QEIAQSIKAKG-YGEIDITTVDADSIEELVALINEVKPQ 78 (405)
T ss_dssp CEEEEECCSHHHHHHHHHHH-TCTTTCCEEEEEESCHHHH-HHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHHHHCCS
T ss_pred CEEEEECCCHHHHHHHHHHH-hCCCCceEEEEEECCHHHH-HHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHHhhCCC
Confidence 57999999999999999985 555 4899999987542 22222111000 00000 0001112456778887 89
Q ss_pred EEEEccCC
Q 016620 239 VISLHPVL 246 (386)
Q Consensus 239 iVvl~lPl 246 (386)
+|+.++|.
T Consensus 79 vVin~ag~ 86 (405)
T 4ina_A 79 IVLNIALP 86 (405)
T ss_dssp EEEECSCG
T ss_pred EEEECCCc
Confidence 99999884
No 400
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=94.76 E-value=0.038 Score=53.49 Aligned_cols=95 Identities=11% Similarity=0.041 Sum_probs=59.2
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-----hC
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (386)
.|++|.|+|.|.||...++.+ +.+|+ +|++.+++..... + .++.+..........++.+.+. ..
T Consensus 190 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~vi~~~~~~~~~~~~~~~~gg~ 259 (371)
T 1f8f_A 190 PASSFVTWGAGAVGLSALLAA-KVCGASIIIAVDIVESRLE--L-------AKQLGATHVINSKTQDPVAAIKEITDGGV 259 (371)
T ss_dssp TTCEEEEESCSHHHHHHHHHH-HHHTCSEEEEEESCHHHHH--H-------HHHHTCSEEEETTTSCHHHHHHHHTTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCeEEEECCCHHHHH--H-------HHHcCCCEEecCCccCHHHHHHHhcCCCC
Confidence 578999999999999999975 78999 7999988764421 1 1112221111111123333322 36
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+|+-+... +++ -...++.++++..++.++-
T Consensus 260 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 260 NFALESTGS-PEI----LKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp EEEEECSCC-HHH----HHHHHHTEEEEEEEEECCC
T ss_pred cEEEECCCC-HHH----HHHHHHHHhcCCEEEEeCC
Confidence 888888763 111 1456777888888888764
No 401
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=94.72 E-value=0.043 Score=52.69 Aligned_cols=95 Identities=15% Similarity=0.086 Sum_probs=58.6
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh------h
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (386)
.|.+|.|+|.|.||...++.+ +..|+ +|++.+++..... + .++.+..........++.+.+. .
T Consensus 166 ~g~~VlV~GaG~vG~~a~qla-~~~Ga~~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~v~~~t~g~g 235 (352)
T 3fpc_A 166 LGDTVCVIGIGPVGLMSVAGA-NHLGAGRIFAVGSRKHCCD--I-------ALEYGATDIINYKNGDIVEQILKATDGKG 235 (352)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HTTTCSSEEEECCCHHHHH--H-------HHHHTCCEEECGGGSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCcEEEEECCCHHHHH--H-------HHHhCCceEEcCCCcCHHHHHHHHcCCCC
Confidence 588999999999999999985 79999 7999998765321 1 1122222111111223333221 3
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+-+...... -...++.++++..++.++-
T Consensus 236 ~D~v~d~~g~~~~-----~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 236 VDKVVIAGGDVHT-----FAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp EEEEEECSSCTTH-----HHHHHHHEEEEEEEEECCC
T ss_pred CCEEEECCCChHH-----HHHHHHHHhcCCEEEEecc
Confidence 7888877764211 1455667788877777753
No 402
>3eag_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-ME diaminopimelate ligase; UDP-N-acetylmuramate:L-alanyl-G glutamyl-MESO-diaminopimelate ligase; 2.55A {Neisseria meningitidis MC58}
Probab=94.67 E-value=0.068 Score=51.06 Aligned_cols=115 Identities=16% Similarity=0.075 Sum_probs=69.2
Q ss_pred CCeEEEEecChhHHH-HHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh-hhCCEEEE
Q 016620 165 GQTVGVIGAGRIGSA-YARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL-READVISL 242 (386)
Q Consensus 165 g~~vgIvG~G~IG~~-iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell-~~aDiVvl 242 (386)
.++|.|||.|.+|.+ +|+.| +..|++|.++|........+. ++..+. .+..-.+.+++. .++|+|+.
T Consensus 4 ~~~i~~iGiGg~Gms~~A~~L-~~~G~~V~~~D~~~~~~~~~~-------L~~~gi---~v~~g~~~~~l~~~~~d~vV~ 72 (326)
T 3eag_A 4 MKHIHIIGIGGTFMGGLAAIA-KEAGFEVSGCDAKMYPPMSTQ-------LEALGI---DVYEGFDAAQLDEFKADVYVI 72 (326)
T ss_dssp CCEEEEESCCSHHHHHHHHHH-HHTTCEEEEEESSCCTTHHHH-------HHHTTC---EEEESCCGGGGGSCCCSEEEE
T ss_pred CcEEEEEEECHHHHHHHHHHH-HhCCCEEEEEcCCCCcHHHHH-------HHhCCC---EEECCCCHHHcCCCCCCEEEE
Confidence 468999999999996 89887 689999999998653211111 222222 121112334444 47999998
Q ss_pred ccCC---Chhhh-------hcccH-HHHhc--CCC-CcEEEEcCCCcccCHHHHHHHHHcCC
Q 016620 243 HPVL---DKTTY-------HLINK-ERLAT--MKK-EAILVNCSRGPVIDEVALVEHLKQNP 290 (386)
Q Consensus 243 ~lPl---t~~t~-------~li~~-~~~~~--mk~-gailIN~aRg~~vde~aL~~aL~~g~ 290 (386)
..-. +|.-. .++.+ +.|.. ++. ..+-|--+.|+.--..-|...|+...
T Consensus 73 Spgi~~~~p~~~~a~~~gi~v~~~~e~~~~~~~~~~~~IaVTGTnGKTTTt~ll~~iL~~~g 134 (326)
T 3eag_A 73 GNVAKRGMDVVEAILNLGLPYISGPQWLSENVLHHHWVLGVAGTHGKTTTASMLAWVLEYAG 134 (326)
T ss_dssp CTTCCTTCHHHHHHHHTTCCEEEHHHHHHHHTGGGSEEEEEESSSCHHHHHHHHHHHHHHTT
T ss_pred CCCcCCCCHHHHHHHHcCCcEEeHHHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHHcC
Confidence 7433 23211 24444 33443 333 34567777898776677777777643
No 403
>1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A
Probab=94.66 E-value=0.15 Score=48.86 Aligned_cols=102 Identities=16% Similarity=0.158 Sum_probs=59.1
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCc-------EEEEEcCC----hhhHHHHHHhhhhhhhhhcC-CCCccccccCCHHH
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKM-------NLIYYDLY----QATRLEKFVTAYGQFLKANG-EQPVTWKRASSMDE 232 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~-------~V~~~d~~----~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~l~e 232 (386)
++|+|+|. |.+|+.++..|+ .-|. +|..+|+. .. +.+..... +.... ..........++.+
T Consensus 6 ~KI~ViGaaG~VG~~l~~~L~-~~~~~~~~~~~ev~l~Di~~~~~~~-~~~g~~~d----l~~~~~~~~~~i~~~~~~~~ 79 (329)
T 1b8p_A 6 MRVAVTGAAGQICYSLLFRIA-NGDMLGKDQPVILQLLEIPNEKAQK-ALQGVMME----IDDCAFPLLAGMTAHADPMT 79 (329)
T ss_dssp EEEEESSTTSHHHHHHHHHHH-TTTTTCTTCCEEEEEECCSCHHHHH-HHHHHHHH----HHTTTCTTEEEEEEESSHHH
T ss_pred CEEEEECCCChHHHHHHHHHH-hCCCcCCCCCCEEEEEcCCCccccc-cchhhHHH----HhhhcccccCcEEEecCcHH
Confidence 58999998 999999998874 4453 89999987 32 11111000 11110 11112223367889
Q ss_pred HhhhCCEEEEccCCChh---hhh-c--cc----H---HHHhcC-CCCcEEEEcCC
Q 016620 233 VLREADVISLHPVLDKT---TYH-L--IN----K---ERLATM-KKEAILVNCSR 273 (386)
Q Consensus 233 ll~~aDiVvl~lPlt~~---t~~-l--i~----~---~~~~~m-k~gailIN~aR 273 (386)
.++.||+|+++...... ++. + .| . +.+... ++.++||+++-
T Consensus 80 al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 80 AFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred HhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 99999999988653221 110 1 01 1 122233 47889999974
No 404
>1rm4_O Glyceraldehyde 3-phosphate dehydrogenase A; rossmann fold, GAPDH-NADP complex, oxidoreductase; HET: NDP; 2.00A {Spinacia oleracea} SCOP: c.2.1.3 d.81.1.1 PDB: 1nbo_O* 2hki_A 2pkq_P* 1rm5_O* 1rm3_O* 2pkr_O* 1jn0_O* 3qv1_A* 3k2b_A* 3rvd_A* 2pkq_O*
Probab=94.65 E-value=0.05 Score=52.51 Aligned_cols=30 Identities=23% Similarity=0.443 Sum_probs=23.3
Q ss_pred eEEEEecChhHHHHHHHHHhc--CCcEEEEEc
Q 016620 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYD 196 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~--fg~~V~~~d 196 (386)
+|||+|+|.||+.+.|.|... -.++|.+.+
T Consensus 3 kVgInG~G~IGr~llR~l~~~~~p~~eivaIn 34 (337)
T 1rm4_O 3 KVAINGFGRIGRNFLRCWHGRKDSPLDVVVIN 34 (337)
T ss_dssp EEEEECCSHHHHHHHHHHHTCSSCSEEEEEEE
T ss_pred EEEEECCCHHHHHHHHHHHhCCCCCeEEEEEE
Confidence 799999999999999987432 256776554
No 405
>2ixa_A Alpha-N-acetylgalactosaminidase; NAD, A-ECO conversion, hydrolase; HET: NAD; 2.3A {Flavobacterium meningosepticum} PDB: 2ixb_A*
Probab=94.65 E-value=0.088 Score=52.43 Aligned_cols=74 Identities=18% Similarity=0.240 Sum_probs=47.9
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccC----CHHHHhh--hCC
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS----SMDEVLR--EAD 238 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~l~ell~--~aD 238 (386)
.+|||||+|.||+..++.+.+.-++++. ++|++.... +.+.+. +...+... ...+. +++++++ +.|
T Consensus 21 ~rvgiIG~G~~g~~h~~~l~~~~~~~lvav~d~~~~~~-~~~a~~----~~~~g~~~--~~~~~~~~~~~~~ll~~~~vD 93 (444)
T 2ixa_A 21 VRIAFIAVGLRGQTHVENMARRDDVEIVAFADPDPYMV-GRAQEI----LKKNGKKP--AKVFGNGNDDYKNMLKDKNID 93 (444)
T ss_dssp EEEEEECCSHHHHHHHHHHHTCTTEEEEEEECSCHHHH-HHHHHH----HHHTTCCC--CEEECSSTTTHHHHTTCTTCC
T ss_pred ceEEEEecCHHHHHHHHHHHhCCCcEEEEEEeCCHHHH-HHHHHH----HHhcCCCC--CceeccCCCCHHHHhcCCCCC
Confidence 4799999999999999887433477764 778876542 221110 11112111 11245 8999997 589
Q ss_pred EEEEccCC
Q 016620 239 VISLHPVL 246 (386)
Q Consensus 239 iVvl~lPl 246 (386)
+|++|+|.
T Consensus 94 ~V~i~tp~ 101 (444)
T 2ixa_A 94 AVFVSSPW 101 (444)
T ss_dssp EEEECCCG
T ss_pred EEEEcCCc
Confidence 99999995
No 406
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=94.64 E-value=0.082 Score=49.00 Aligned_cols=38 Identities=18% Similarity=0.181 Sum_probs=33.1
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.+.|+++.|.|. |.||+++|+.|+ ..|++|++.+|+..
T Consensus 18 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 58 (285)
T 2p91_A 18 LLEGKRALITGVANERSIAYGIAKSFH-REGAQLAFTYATPK 58 (285)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEESSGG
T ss_pred ccCCCEEEEECCCCCCcHHHHHHHHHH-HcCCEEEEEeCCHH
Confidence 488999999998 599999999985 67999999998763
No 407
>1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A
Probab=94.62 E-value=0.098 Score=50.06 Aligned_cols=73 Identities=22% Similarity=0.286 Sum_probs=47.0
Q ss_pred CCeEEEEe-cChhHHHHHHHHHhcCC--cEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc---cCCHHHHhhhCC
Q 016620 165 GQTVGVIG-AGRIGSAYARMMVEGFK--MNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR---ASSMDEVLREAD 238 (386)
Q Consensus 165 g~~vgIvG-~G~IG~~iA~~L~~~fg--~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~ell~~aD 238 (386)
.++|+|+| .|.+|..++..|+ ..| .+|..+|...... ...+ +.... .+..... ..++++.++.||
T Consensus 8 ~mKI~ViGAaG~VG~~la~~L~-~~g~~~ev~l~Di~~~~~--~~~d-----L~~~~-~~~~v~~~~~t~d~~~al~gaD 78 (326)
T 1smk_A 8 GFKVAILGAAGGIGQPLAMLMK-MNPLVSVLHLYDVVNAPG--VTAD-----ISHMD-TGAVVRGFLGQQQLEAALTGMD 78 (326)
T ss_dssp CEEEEEETTTSTTHHHHHHHHH-HCTTEEEEEEEESSSHHH--HHHH-----HHTSC-SSCEEEEEESHHHHHHHHTTCS
T ss_pred CCEEEEECCCChHHHHHHHHHH-hCCCCCEEEEEeCCCcHh--HHHH-----hhccc-ccceEEEEeCCCCHHHHcCCCC
Confidence 36899999 8999999999874 455 6899999765411 1000 11111 1111111 236778899999
Q ss_pred EEEEccCC
Q 016620 239 VISLHPVL 246 (386)
Q Consensus 239 iVvl~lPl 246 (386)
+|+++.+.
T Consensus 79 vVi~~ag~ 86 (326)
T 1smk_A 79 LIIVPAGV 86 (326)
T ss_dssp EEEECCCC
T ss_pred EEEEcCCc
Confidence 99999864
No 408
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=94.54 E-value=0.064 Score=47.49 Aligned_cols=71 Identities=14% Similarity=0.020 Sum_probs=46.7
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCC--CccccccCCHHHHhhhCCEEEE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~l~ell~~aDiVvl 242 (386)
++|.|.| .|.||+.+++.| ..-|.+|++.+|+...... +. .+.. ........+++++++.+|+|+.
T Consensus 5 ~~ilItGatG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~---------~~-~~~~~~~~Dl~d~~~~~~~~~~~d~vi~ 73 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEA-LNRGFEVTAVVRHPEKIKI---------EN-EHLKVKKADVSSLDEVCEVCKGADAVIS 73 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHH-HTTTCEEEEECSCGGGCCC---------CC-TTEEEECCCTTCHHHHHHHHTTCSEEEE
T ss_pred CEEEEEcCCchHHHHHHHHH-HHCCCEEEEEEcCcccchh---------cc-CceEEEEecCCCHHHHHHHhcCCCEEEE
Confidence 6899999 599999999998 4779999999998653100 00 0000 0001112346678899999998
Q ss_pred ccCCC
Q 016620 243 HPVLD 247 (386)
Q Consensus 243 ~lPlt 247 (386)
+....
T Consensus 74 ~a~~~ 78 (227)
T 3dhn_A 74 AFNPG 78 (227)
T ss_dssp CCCC-
T ss_pred eCcCC
Confidence 87644
No 409
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=94.53 E-value=0.043 Score=53.05 Aligned_cols=94 Identities=18% Similarity=0.139 Sum_probs=60.4
Q ss_pred CCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-----hC
Q 016620 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EA 237 (386)
Q Consensus 164 ~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~a 237 (386)
.|++|.|+| .|.||..+++.+ +..|++|++.+++..... + +++.+..........++.+.+. ..
T Consensus 163 ~g~~VlV~Ga~G~iG~~~~q~a-~~~Ga~Vi~~~~~~~~~~--~-------~~~~Ga~~~~~~~~~~~~~~~~~~~~~g~ 232 (362)
T 2c0c_A 163 EGKKVLVTAAAGGTGQFAMQLS-KKAKCHVIGTCSSDEKSA--F-------LKSLGCDRPINYKTEPVGTVLKQEYPEGV 232 (362)
T ss_dssp TTCEEEETTTTBTTHHHHHHHH-HHTTCEEEEEESSHHHHH--H-------HHHTTCSEEEETTTSCHHHHHHHHCTTCE
T ss_pred CCCEEEEeCCCcHHHHHHHHHH-HhCCCEEEEEECCHHHHH--H-------HHHcCCcEEEecCChhHHHHHHHhcCCCC
Confidence 588999999 799999999985 789999999998754321 1 1112221111111123444332 36
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+|+.+... . .-...++.++++..+|.++.
T Consensus 233 D~vid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 262 (362)
T 2c0c_A 233 DVVYESVGG--A----MFDLAVDALATKGRLIVIGF 262 (362)
T ss_dssp EEEEECSCT--H----HHHHHHHHEEEEEEEEECCC
T ss_pred CEEEECCCH--H----HHHHHHHHHhcCCEEEEEeC
Confidence 888888763 1 12456777888888888765
No 410
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=94.52 E-value=0.049 Score=51.86 Aligned_cols=95 Identities=15% Similarity=0.113 Sum_probs=58.9
Q ss_pred cCCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh------h
Q 016620 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------R 235 (386)
Q Consensus 163 l~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~ 235 (386)
-.|++|.|+| .|.||...++.+ +..|++|++.+++..... + .++.+..........++.+.+ .
T Consensus 147 ~~g~~vlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~-------~~~~ga~~~~~~~~~~~~~~~~~~~~~~ 216 (334)
T 3qwb_A 147 KKGDYVLLFAAAGGVGLILNQLL-KMKGAHTIAVASTDEKLK--I-------AKEYGAEYLINASKEDILRQVLKFTNGK 216 (334)
T ss_dssp CTTCEEEESSTTBHHHHHHHHHH-HHTTCEEEEEESSHHHHH--H-------HHHTTCSEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--H-------HHHcCCcEEEeCCCchHHHHHHHHhCCC
Confidence 3688999999 899999999985 789999999998764421 1 112222111111112333222 1
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+.+... + .-...++.++++..++.++.
T Consensus 217 g~D~vid~~g~--~----~~~~~~~~l~~~G~iv~~G~ 248 (334)
T 3qwb_A 217 GVDASFDSVGK--D----TFEISLAALKRKGVFVSFGN 248 (334)
T ss_dssp CEEEEEECCGG--G----GHHHHHHHEEEEEEEEECCC
T ss_pred CceEEEECCCh--H----HHHHHHHHhccCCEEEEEcC
Confidence 36888877753 1 12456677788878877753
No 411
>2q3e_A UDP-glucose 6-dehydrogenase; hexamer, structural genomics, S genomics consortium, SGC, oxidoreductase; HET: NAD UPG; 2.00A {Homo sapiens} PDB: 2qg4_A* 3khu_A* 3itk_A* 3tdk_A* 3ptz_A* 3prj_A* 3tf5_A
Probab=94.49 E-value=0.2 Score=50.20 Aligned_cols=105 Identities=11% Similarity=0.060 Sum_probs=66.5
Q ss_pred ccCCCeEEEEecC----------hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCC----cccccc
Q 016620 162 LLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQP----VTWKRA 227 (386)
Q Consensus 162 ~l~g~~vgIvG~G----------~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 227 (386)
.+.|++|+|+|+. +-...+++.| ...|++|.+|||....... ...+.. .+ ...+ ......
T Consensus 326 ~~~~~~v~vlGlafK~~~dD~R~sp~~~i~~~L-~~~g~~v~~~DP~~~~~~~--~~~~~~-~~--~~~~~~~~~~~~~~ 399 (467)
T 2q3e_A 326 TVTDKKIAILGFAFKKDTGDTRESSSIYISKYL-MDEGAHLHIYDPKVPREQI--VVDLSH-PG--VSEDDQVSRLVTIS 399 (467)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHHH--HHHHCC---------CHHHHHEEEC
T ss_pred ccCCCEEEEEeeccCCCCcchhhChHHHHHHHH-HHCCCEEEEEcCccCHHHH--hhhhcc-cc--ccccccccCceeec
Confidence 4789999999986 3788899998 6899999999998543210 000000 00 0000 012223
Q ss_pred CCHHHHhhhCCEEEEccCCChhhhhcccHH-HHhcCCCCcEEEEcCCCc
Q 016620 228 SSMDEVLREADVISLHPVLDKTTYHLINKE-RLATMKKEAILVNCSRGP 275 (386)
Q Consensus 228 ~~l~ell~~aDiVvl~lPlt~~t~~li~~~-~~~~mk~gailIN~aRg~ 275 (386)
.+..+.++.+|+|++++.- ++-+. ++.+ ....|+...+++|. |+-
T Consensus 400 ~~~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~~ 445 (467)
T 2q3e_A 400 KDPYEACDGAHAVVICTEW-DMFKE-LDYERIHKKMLKPAFIFDG-RRV 445 (467)
T ss_dssp SSHHHHHTTCSEEEECSCC-GGGGG-SCHHHHHHHSCSSCEEEES-SCT
T ss_pred CCHHHHHhCCcEEEEecCC-hhhhc-CCHHHHHHhcCCCCEEEeC-CCc
Confidence 5788899999999999985 34333 3544 44567776668885 543
No 412
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=94.41 E-value=0.051 Score=52.38 Aligned_cols=94 Identities=17% Similarity=0.210 Sum_probs=61.5
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHHhhhCCEE
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEVLREADVI 240 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~ell~~aDiV 240 (386)
.|.+|.|+|.|.||...++.+ +.+|++|++.+++....... .++.+.... ....+ +.++....|+|
T Consensus 180 ~g~~VlV~GaG~vG~~a~qla-k~~Ga~Vi~~~~~~~~~~~~--------~~~lGa~~v--i~~~~~~~~~~~~~g~D~v 248 (357)
T 2cf5_A 180 PGLRGGILGLGGVGHMGVKIA-KAMGHHVTVISSSNKKREEA--------LQDLGADDY--VIGSDQAKMSELADSLDYV 248 (357)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCEEEEEESSTTHHHHH--------HTTSCCSCE--EETTCHHHHHHSTTTEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHCCCeEEEEeCChHHHHHH--------HHHcCCcee--eccccHHHHHHhcCCCCEE
Confidence 688999999999999999975 78999999999876442110 012232211 11122 22333457999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+-+...... -...++.++++..++.++-
T Consensus 249 id~~g~~~~-----~~~~~~~l~~~G~iv~~G~ 276 (357)
T 2cf5_A 249 IDTVPVHHA-----LEPYLSLLKLDGKLILMGV 276 (357)
T ss_dssp EECCCSCCC-----SHHHHTTEEEEEEEEECSC
T ss_pred EECCCChHH-----HHHHHHHhccCCEEEEeCC
Confidence 988864211 2456778888988888864
No 413
>3csu_A Protein (aspartate carbamoyltransferase); transferase (carbamoyl-P; 1.88A {Escherichia coli} SCOP: c.78.1.1 c.78.1.1 PDB: 1r0b_A* 1q95_A* 1raa_A* 1rab_A* 1rac_A* 1rad_A* 1rae_A* 1raf_A* 1rag_A* 1rah_A* 1rai_A* 1r0c_A* 1za2_A* 1za1_A* 2fzc_A* 2fzg_A* 2fzk_A* 2h3e_A* 2ipo_A* 2qg9_A ...
Probab=94.39 E-value=0.067 Score=50.98 Aligned_cols=102 Identities=18% Similarity=0.339 Sum_probs=64.1
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
.+.|.+|+++|= |++..+.+..+ ..| |++|.+..|..-...+...+ ..+..| ..+....+++|.++++
T Consensus 151 ~l~gl~va~vGD~~~~rva~Sl~~~~-~~~~g~~v~~~~P~~~~~~~~~~~----~~~~~g---~~~~~~~d~~eav~~a 222 (310)
T 3csu_A 151 RLDNLHVAMVGDLKYGRTVHSLTQAL-AKFDGNRFYFIAPDALAMPQYILD----MLDEKG---IAWSLHSSIEEVMAEV 222 (310)
T ss_dssp CSSSCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHH----HHHHTT---CCEEECSCGGGTTTTC
T ss_pred CcCCcEEEEECCCCCCchHHHHHHHH-HhCCCCEEEEECCcccccCHHHHH----HHHHcC---CeEEEEcCHHHHhcCC
Confidence 388999999998 58999999987 578 99999998754321111111 111222 1233457899999999
Q ss_pred CEEEEccCCCh----hh------hhcccHHHHhcCCCCcEEEEc
Q 016620 238 DVISLHPVLDK----TT------YHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 238 DiVvl~lPlt~----~t------~~li~~~~~~~mk~gailIN~ 271 (386)
|+|..-.-..+ +. ..-++.+.++.+|++++|.-+
T Consensus 223 Dvvyt~~~q~er~~~~~~~~~~~~y~v~~~ll~~a~~~ai~mH~ 266 (310)
T 3csu_A 223 DILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHP 266 (310)
T ss_dssp SEEEECC-----------------CCBCGGGGTTCCTTCEEECC
T ss_pred CEEEECCccccccCHHHHHHHhhccCCCHHHHhhcCCCCEEECC
Confidence 99987654221 10 133566666666666666554
No 414
>3ip3_A Oxidoreductase, putative; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.14A {Thermotoga maritima}
Probab=94.39 E-value=0.037 Score=52.93 Aligned_cols=72 Identities=15% Similarity=0.138 Sum_probs=45.1
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhh--CCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLRE--ADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~--aDiVvl 242 (386)
.+|||||+|.+|+..++.+ .-++++. ++|++.....+.+.+. .++.+ .....+.++++++++ .|+|++
T Consensus 3 ~rvgiiG~G~~~~~~~~~l--~~~~~lvav~d~~~~~~~~~~~~~----~~~~~---~~~~~~~~~~~ll~~~~vD~V~I 73 (337)
T 3ip3_A 3 LKICVIGSSGHFRYALEGL--DEECSITGIAPGVPEEDLSKLEKA----ISEMN---IKPKKYNNWWEMLEKEKPDILVI 73 (337)
T ss_dssp EEEEEECSSSCHHHHHTTC--CTTEEEEEEECSSTTCCCHHHHHH----HHTTT---CCCEECSSHHHHHHHHCCSEEEE
T ss_pred eEEEEEccchhHHHHHHhc--CCCcEEEEEecCCchhhHHHHHHH----HHHcC---CCCcccCCHHHHhcCCCCCEEEE
Confidence 4799999999999776654 4577766 5777652111111110 11111 112246799999975 899999
Q ss_pred ccCC
Q 016620 243 HPVL 246 (386)
Q Consensus 243 ~lPl 246 (386)
|+|.
T Consensus 74 ~tp~ 77 (337)
T 3ip3_A 74 NTVF 77 (337)
T ss_dssp CSSH
T ss_pred eCCc
Confidence 9984
No 415
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=94.39 E-value=0.042 Score=50.54 Aligned_cols=39 Identities=23% Similarity=0.258 Sum_probs=33.7
Q ss_pred ccCCCeEEEEe---cChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 162 LLKGQTVGVIG---AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 162 ~l~g~~vgIvG---~G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
.+.||++.|.| -|.||+++|+.|+ ..|++|+..+++...
T Consensus 4 ~l~~k~vlVTGa~~s~gIG~aia~~l~-~~G~~V~~~~r~~~~ 45 (269)
T 2h7i_A 4 LLDGKRILVSGIITDSSIAFHIARVAQ-EQGAQLVLTGFDRLR 45 (269)
T ss_dssp TTTTCEEEECCCSSTTSHHHHHHHHHH-HTTCEEEEEECSCHH
T ss_pred ccCCCEEEEECCCCCCchHHHHHHHHH-HCCCEEEEEecChHH
Confidence 47899999999 5999999999985 679999999987644
No 416
>3b1j_A Glyceraldehyde 3-phosphate dehydrogenase (NADP+); alpha/beta fold, oxidoreductase-protein binding complex; HET: NAD; 2.20A {Synechococcus elongatus} PDB: 3b1k_A* 3b20_A*
Probab=94.33 E-value=0.054 Score=52.31 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=24.5
Q ss_pred eEEEEecChhHHHHHHHHHhc--CCcEEEEEcC
Q 016620 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~--fg~~V~~~d~ 197 (386)
+|||+|+|.||+.+.+.|... -+++|.+.+.
T Consensus 4 kVgI~G~G~IGr~v~r~l~~~~~~~~evvaInd 36 (339)
T 3b1j_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINN 36 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSCCSEEEEEEEC
T ss_pred EEEEECCCHHHHHHHHHHHhcCCCCeEEEEEec
Confidence 799999999999999987433 3578776543
No 417
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=94.32 E-value=0.17 Score=44.63 Aligned_cols=71 Identities=13% Similarity=0.111 Sum_probs=46.8
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCC--Cccccc-cCCHHHHhhhCCEEE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ--PVTWKR-ASSMDEVLREADVIS 241 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-~~~l~ell~~aDiVv 241 (386)
++|.|.| .|.||+.+++.| ...|.+|++.+|+...... . .+.. ...... ..++.++++.+|+|+
T Consensus 1 M~ilItGatG~iG~~l~~~L-~~~g~~V~~~~R~~~~~~~---------~--~~~~~~~~D~~d~~~~~~~~~~~~d~vi 68 (219)
T 3dqp_A 1 MKIFIVGSTGRVGKSLLKSL-STTDYQIYAGARKVEQVPQ---------Y--NNVKAVHFDVDWTPEEMAKQLHGMDAII 68 (219)
T ss_dssp CEEEEESTTSHHHHHHHHHH-TTSSCEEEEEESSGGGSCC---------C--TTEEEEECCTTSCHHHHHTTTTTCSEEE
T ss_pred CeEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCccchhh---------c--CCceEEEecccCCHHHHHHHHcCCCEEE
Confidence 4789998 699999999998 5779999999998653110 0 0000 000111 124556688899999
Q ss_pred EccCCCh
Q 016620 242 LHPVLDK 248 (386)
Q Consensus 242 l~lPlt~ 248 (386)
.+.....
T Consensus 69 ~~ag~~~ 75 (219)
T 3dqp_A 69 NVSGSGG 75 (219)
T ss_dssp ECCCCTT
T ss_pred ECCcCCC
Confidence 8887654
No 418
>2d2i_A Glyceraldehyde 3-phosphate dehydrogenase; rossmann fold, protein-NADP+ complex, oxidoreductase; HET: NAP; 2.50A {Synechococcus SP} PDB: 2duu_A
Probab=94.32 E-value=0.062 Score=52.65 Aligned_cols=31 Identities=23% Similarity=0.409 Sum_probs=24.5
Q ss_pred eEEEEecChhHHHHHHHHHhc--CCcEEEEEcC
Q 016620 167 TVGVIGAGRIGSAYARMMVEG--FKMNLIYYDL 197 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~--fg~~V~~~d~ 197 (386)
+|||+|+|.||+.+++.|... -+++|.+.+.
T Consensus 4 kVgInGfGrIGr~vlR~l~~~~~~~veIVaInd 36 (380)
T 2d2i_A 4 RVAINGFGRIGRNFLRCWFGRQNTDLEVVAINN 36 (380)
T ss_dssp EEEEECCSHHHHHHHHHHHHCSSCSEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHhcCCCCCEEEEEEec
Confidence 799999999999999987432 3578877654
No 419
>2x5j_O E4PDH, D-erythrose-4-phosphate dehydrogenase; oxidoreductase, hydride transfer, aldehyde dehydrogenase, PY biosynthesis; 2.30A {Escherichia coli} PDB: 2xf8_A* 2x5k_O*
Probab=94.31 E-value=0.051 Score=52.50 Aligned_cols=31 Identities=26% Similarity=0.434 Sum_probs=24.7
Q ss_pred eEEEEecChhHHHHHHHHHh---cCCcEEEEEcC
Q 016620 167 TVGVIGAGRIGSAYARMMVE---GFKMNLIYYDL 197 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~---~fg~~V~~~d~ 197 (386)
+|||+|+|.||+.+.+.|.. .-.++|.+.+.
T Consensus 4 kVgI~G~G~iGr~l~r~l~~~~~~~~~eivai~~ 37 (339)
T 2x5j_O 4 RVAINGFGRIGRNVVRALYESGRRAEITVVAINE 37 (339)
T ss_dssp EEEEECCSHHHHHHHHHHHHTSGGGTEEEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHcCCCCCCEEEEEEeC
Confidence 79999999999999998743 23678876654
No 420
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=94.31 E-value=0.047 Score=51.84 Aligned_cols=94 Identities=14% Similarity=0.081 Sum_probs=59.6
Q ss_pred CCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh------hh
Q 016620 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------RE 236 (386)
Q Consensus 164 ~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~ 236 (386)
.|++|.|+| .|.||...++.+ +..|++|++.+++..... +. ++.+..........++.+.+ ..
T Consensus 140 ~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~~-------~~~Ga~~~~~~~~~~~~~~~~~~~~~~g 209 (325)
T 3jyn_A 140 PGEIILFHAAAGGVGSLACQWA-KALGAKLIGTVSSPEKAA--HA-------KALGAWETIDYSHEDVAKRVLELTDGKK 209 (325)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSHHHHH--HH-------HHHTCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEEcCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--HH-------HHcCCCEEEeCCCccHHHHHHHHhCCCC
Confidence 688999999 799999999985 789999999998765421 11 11122111111112333322 24
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+.+... + .-...++.++++..++.++.
T Consensus 210 ~Dvvid~~g~--~----~~~~~~~~l~~~G~iv~~g~ 240 (325)
T 3jyn_A 210 CPVVYDGVGQ--D----TWLTSLDSVAPRGLVVSFGN 240 (325)
T ss_dssp EEEEEESSCG--G----GHHHHHTTEEEEEEEEECCC
T ss_pred ceEEEECCCh--H----HHHHHHHHhcCCCEEEEEec
Confidence 7888887763 1 12456778888888888764
No 421
>1vkn_A N-acetyl-gamma-glutamyl-phosphate reductase; TM1782, structu genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; 1.80A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.1
Probab=94.29 E-value=0.23 Score=48.04 Aligned_cols=95 Identities=14% Similarity=0.194 Sum_probs=56.7
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
.+|||+|. |.+|+.+.++|..-=..++.........- ..+.+.|+ .++ ....+.. .+.++++.++|+|++|+
T Consensus 14 ~~V~IvGAtG~vG~ellrlL~~hP~~el~~l~S~~~aG-~~~~~~~p-~~~----~~l~~~~-~~~~~~~~~~Dvvf~al 86 (351)
T 1vkn_A 14 IRAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAG-KKLEEIFP-STL----ENSILSE-FDPEKVSKNCDVLFTAL 86 (351)
T ss_dssp EEEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTT-SBHHHHCG-GGC----CCCBCBC-CCHHHHHHHCSEEEECC
T ss_pred eEEEEECCCCHHHHHHHHHHHcCCCcEEEEEeCccccc-CChHHhCh-hhc----cCceEEe-CCHHHhhcCCCEEEECC
Confidence 47999975 99999999998533345666654322110 01111111 111 1112222 35666668899999999
Q ss_pred CCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 245 VLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 245 Plt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
|.... .+....+ .|+.+||.|.-
T Consensus 87 p~~~s------~~~~~~~-~g~~VIDlSsd 109 (351)
T 1vkn_A 87 PAGAS------YDLVREL-KGVKIIDLGAD 109 (351)
T ss_dssp STTHH------HHHHTTC-CSCEEEESSST
T ss_pred CcHHH------HHHHHHh-CCCEEEECChh
Confidence 96432 4444555 79999999853
No 422
>1mv8_A GMD, GDP-mannose 6-dehydrogenase; rossman fold, domain-swapped dimer, enzyme complex with COFA product, oxidoreductase; HET: SUC NAD GDX; 1.55A {Pseudomonas aeruginosa} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1mfz_A* 1muu_A*
Probab=94.28 E-value=0.14 Score=50.96 Aligned_cols=93 Identities=20% Similarity=0.181 Sum_probs=60.4
Q ss_pred CCCeEEEEecC----------hhHHHHHHHHHhcCCcEEEEEcCChhhHH-----HHHHhhhhhhhhhcCCCCccccccC
Q 016620 164 KGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRL-----EKFVTAYGQFLKANGEQPVTWKRAS 228 (386)
Q Consensus 164 ~g~~vgIvG~G----------~IG~~iA~~L~~~fg~~V~~~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (386)
.|++|+|+|+. +-...+++.| ...|++|.+|||...... ..|... ..... ......
T Consensus 312 ~~~~v~vlGlafK~~~~d~r~s~~~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~ 382 (436)
T 1mv8_A 312 DTRKVGLLGLSFKAGTDDLRESPLVELAEML-IGKGYELRIFDRNVEYARVHGANKEYIES---KIPHV-----SSLLVS 382 (436)
T ss_dssp SCCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECHHHHHHTTSSSCHHHHHH---TSHHH-----HTTBCS
T ss_pred cCCEEEEEccccCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChhhccchhhhhccc---ccccc-----cccccC
Confidence 68999999997 6788999998 689999999999743211 111000 00000 001245
Q ss_pred CHHHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEc
Q 016620 229 SMDEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNC 271 (386)
Q Consensus 229 ~l~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~ 271 (386)
++.+.++.||+|++++.- ++-+.+ + .+.|+ +.+++|+
T Consensus 383 ~~~~~~~~~d~~vi~~~~-~~~~~~-~---~~~~~-~~~i~D~ 419 (436)
T 1mv8_A 383 DLDEVVASSDVLVLGNGD-ELFVDL-V---NKTPS-GKKLVDL 419 (436)
T ss_dssp CHHHHHHHCSEEEECSCC-GGGHHH-H---HSCCT-TCEEEES
T ss_pred CHHHHHhCCcEEEEeCCc-HHHHhh-h---HHhcC-CCEEEEC
Confidence 788999999999999985 333222 2 34565 5788886
No 423
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=94.27 E-value=0.034 Score=50.95 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=32.8
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.+.|+++.|.|. |.||+++|+.|+ ..|++|++.+|+..
T Consensus 5 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~~ 45 (261)
T 2wyu_A 5 DLSGKKALVMGVTNQRSLGFAIAAKLK-EAGAEVALSYQAER 45 (261)
T ss_dssp CCTTCEEEEESCCSSSSHHHHHHHHHH-HHTCEEEEEESCGG
T ss_pred CCCCCEEEEECCCCCCcHHHHHHHHHH-HCCCEEEEEcCCHH
Confidence 578999999998 699999999985 56999999988763
No 424
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=94.26 E-value=0.18 Score=48.84 Aligned_cols=98 Identities=17% Similarity=0.154 Sum_probs=61.7
Q ss_pred cCCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh---hhCC
Q 016620 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL---READ 238 (386)
Q Consensus 163 l~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell---~~aD 238 (386)
-.|++|.|+| .|.||...++.+ +..|++|++.++. .. .+ + +++.+..........++.+.+ ...|
T Consensus 182 ~~g~~VlV~Ga~G~vG~~~~qla-~~~Ga~Vi~~~~~-~~-~~-~-------~~~lGa~~v~~~~~~~~~~~~~~~~g~D 250 (375)
T 2vn8_A 182 CTGKRVLILGASGGVGTFAIQVM-KAWDAHVTAVCSQ-DA-SE-L-------VRKLGADDVIDYKSGSVEEQLKSLKPFD 250 (375)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHH-HHTTCEEEEEECG-GG-HH-H-------HHHTTCSEEEETTSSCHHHHHHTSCCBS
T ss_pred CCCCEEEEECCCCHHHHHHHHHH-HhCCCEEEEEeCh-HH-HH-H-------HHHcCCCEEEECCchHHHHHHhhcCCCC
Confidence 3688999999 799999999985 7899999988743 22 11 1 122232211111112343333 3589
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCc
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGP 275 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~ 275 (386)
+|+-+......+ -...+..++++..++.++...
T Consensus 251 ~vid~~g~~~~~----~~~~~~~l~~~G~iv~~g~~~ 283 (375)
T 2vn8_A 251 FILDNVGGSTET----WAPDFLKKWSGATYVTLVTPF 283 (375)
T ss_dssp EEEESSCTTHHH----HGGGGBCSSSCCEEEESCCSH
T ss_pred EEEECCCChhhh----hHHHHHhhcCCcEEEEeCCCc
Confidence 999998753111 134567789999999998643
No 425
>3aoe_E Glutamate dehydrogenase; rossmann fold, NADH, oxidoreductase; 2.60A {Thermus thermophilus}
Probab=94.23 E-value=0.32 Score=48.21 Aligned_cols=113 Identities=19% Similarity=0.163 Sum_probs=70.0
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCC---------hhhHHHHHHhhhhhhhhhcCCCCccccccCCH
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY---------QATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (386)
.++.|++|.|.|+|++|+..|+.| ...|++|+ +.|.+ ....+.+..+.. ...... .. +-
T Consensus 214 ~~l~gk~vaVqG~GnVG~~~a~~L-~~~GakVVavsD~~G~i~dp~Gld~~~l~~~~~~~------g~v~~~---~~-~~ 282 (419)
T 3aoe_E 214 LDLRGARVVVQGLGQVGAAVALHA-ERLGMRVVAVATSMGGMYAPEGLDVAEVLSAYEAT------GSLPRL---DL-AP 282 (419)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEEETTEEEECTTCCCHHHHHHHHHHH------SSCSCC---CB-CT
T ss_pred CCccCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEEcCCCeEECCCCCCHHHHHHHHHhh------CCccee---ec-cc
Confidence 468999999999999999999998 57899998 55552 111222211110 000000 01 11
Q ss_pred HHH-hhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 231 DEV-LREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 231 ~el-l~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
+++ -..||+++-|.. .+.|+.+....++ -.+++..+-+.+- .++ .+.|.+..+.
T Consensus 283 ~e~~~~~~DVliP~A~-----~n~i~~~~A~~l~-ak~V~EgAN~p~t-~~A-~~~L~~~Gi~ 337 (419)
T 3aoe_E 283 EEVFGLEAEVLVLAAR-----EGALDGDRARQVQ-AQAVVEVANFGLN-PEA-EAYLLGKGAL 337 (419)
T ss_dssp TTGGGSSCSEEEECSC-----TTCBCHHHHTTCC-CSEEEECSTTCBC-HHH-HHHHHHHTCE
T ss_pred hhhhccCceEEEeccc-----ccccccchHhhCC-ceEEEECCCCcCC-HHH-HHHHHHCCCE
Confidence 222 247999998864 5567777777775 3499999998874 333 3455555443
No 426
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=94.21 E-value=0.076 Score=49.18 Aligned_cols=40 Identities=23% Similarity=0.152 Sum_probs=33.5
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
..+.|+++.|.|. |.||+++|+.|+ ..|++|++.+++...
T Consensus 25 ~~~~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~ 65 (283)
T 1g0o_A 25 ASLEGKVALVTGAGRGIGREMAMELG-RRGCKVIVNYANSTE 65 (283)
T ss_dssp GCCTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEeCCCcHHHHHHHHHHH-HCCCEEEEEeCCchH
Confidence 4578999999875 899999999985 679999999887643
No 427
>4e4t_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.55A {Burkholderia ambifaria} PDB: 3uvz_A
Probab=94.21 E-value=0.041 Score=54.58 Aligned_cols=39 Identities=21% Similarity=0.452 Sum_probs=34.5
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
-+.|++|+|+|-|.+|+.+++.+ +.+|.+|+++|+++..
T Consensus 32 ~~~~~~IlIlG~G~lg~~~~~aa-~~lG~~v~v~d~~~~~ 70 (419)
T 4e4t_A 32 ILPGAWLGMVGGGQLGRMFCFAA-QSMGYRVAVLDPDPAS 70 (419)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEECSCTTC
T ss_pred CCCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEECCCCcC
Confidence 46899999999999999999985 7899999999987543
No 428
>3mtj_A Homoserine dehydrogenase; rossmann-fold, PSI, MCSG, structural genomics, midwest cente structural genomics; 2.15A {Thiobacillus denitrificans}
Probab=94.21 E-value=0.077 Score=53.11 Aligned_cols=108 Identities=13% Similarity=0.169 Sum_probs=62.6
Q ss_pred CeEEEEecChhHHHHHHHHHh---------cCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh
Q 016620 166 QTVGVIGAGRIGSAYARMMVE---------GFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~---------~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (386)
.+|||+|+|.||+.+++.+.+ +.+.+|. ++|++.... ..+. . . ...+.++++++.
T Consensus 11 irIgIIG~G~VG~~~~~~L~~~~~~l~~~~g~~i~lvaV~d~~~~~~-~~~~----------~--~--~~~~~d~~ell~ 75 (444)
T 3mtj_A 11 IHVGLLGLGTVGGGTLTVLRRNAEEITRRAGREIRVVRAAVRNLDKA-EALA----------G--G--LPLTTNPFDVVD 75 (444)
T ss_dssp EEEEEECCHHHHHHHHHHHHHTHHHHHHHHSSCEEEEEEECSCHHHH-HHHH----------T--T--CCEESCTHHHHT
T ss_pred ccEEEECCCHHHHHHHHHHHHhHHHHHHhcCCCEEEEEEEECCHHHh-hhhc----------c--c--CcccCCHHHHhc
Confidence 479999999999999876531 2566755 456655432 1110 0 0 123468899986
Q ss_pred --hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCCcc
Q 016620 236 --EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNPMF 292 (386)
Q Consensus 236 --~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~~aL~~g~i~ 292 (386)
+.|+|+.++|....-..++ ...++.|.-++..-=+.. -+-+.|.++.++....
T Consensus 76 d~diDvVve~tp~~~~h~~~~----~~AL~aGKhVvtenkal~a~~~~eL~~~A~~~gv~ 131 (444)
T 3mtj_A 76 DPEIDIVVELIGGLEPARELV----MQAIANGKHVVTANKHLVAKYGNEIFAAAQAKGVM 131 (444)
T ss_dssp CTTCCEEEECCCSSTTHHHHH----HHHHHTTCEEEECCHHHHHHHHHHHHHHHHHHTCC
T ss_pred CCCCCEEEEcCCCchHHHHHH----HHHHHcCCEEEECCcccCHHHHHHHHHHHHHhCCe
Confidence 5799999999532222222 233455554443322222 2336778777765443
No 429
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=94.21 E-value=0.065 Score=50.75 Aligned_cols=94 Identities=14% Similarity=0.113 Sum_probs=56.7
Q ss_pred CCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHH-Hh-----hh
Q 016620 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE-VL-----RE 236 (386)
Q Consensus 164 ~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e-ll-----~~ 236 (386)
.|++|.|.| .|.||..+++.+ +..|++|++.+++...... . ++.+..........++.+ +. ..
T Consensus 140 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~V~~~~~~~~~~~~--~-------~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 209 (327)
T 1qor_A 140 PDEQFLFHAAAGGVGLIACQWA-KALGAKLIGTVGTAQKAQS--A-------LKAGAWQVINYREEDLVERLKEITGGKK 209 (327)
T ss_dssp TTCEEEESSTTBHHHHHHHHHH-HHHTCEEEEEESSHHHHHH--H-------HHHTCSEEEETTTSCHHHHHHHHTTTCC
T ss_pred CCCEEEEECCCCHHHHHHHHHH-HHcCCEEEEEeCCHHHHHH--H-------HHcCCCEEEECCCccHHHHHHHHhCCCC
Confidence 588999999 799999999986 6889999999987543211 1 111111100001122222 21 13
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+.+.. .++ -...++.++++..++.++.
T Consensus 210 ~D~vi~~~g--~~~----~~~~~~~l~~~G~iv~~g~ 240 (327)
T 1qor_A 210 VRVVYDSVG--RDT----WERSLDCLQRRGLMVSFGN 240 (327)
T ss_dssp EEEEEECSC--GGG----HHHHHHTEEEEEEEEECCC
T ss_pred ceEEEECCc--hHH----HHHHHHHhcCCCEEEEEec
Confidence 678877775 221 2456677777777777754
No 430
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=94.20 E-value=0.038 Score=52.79 Aligned_cols=95 Identities=15% Similarity=0.075 Sum_probs=59.3
Q ss_pred cCCCeEEEEecC-hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh------h
Q 016620 163 LKGQTVGVIGAG-RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------R 235 (386)
Q Consensus 163 l~g~~vgIvG~G-~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~ 235 (386)
-.|++|.|+|.| .||...++.+ +..|++|++.+++..... + +++.+..........++.+.+ .
T Consensus 143 ~~g~~VlV~Ga~g~iG~~~~~~a-~~~Ga~Vi~~~~~~~~~~--~-------~~~lga~~~~~~~~~~~~~~~~~~~~~~ 212 (340)
T 3gms_A 143 QRNDVLLVNACGSAIGHLFAQLS-QILNFRLIAVTRNNKHTE--E-------LLRLGAAYVIDTSTAPLYETVMELTNGI 212 (340)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESSSTTHH--H-------HHHHTCSEEEETTTSCHHHHHHHHTTTS
T ss_pred CCCCEEEEeCCccHHHHHHHHHH-HHcCCEEEEEeCCHHHHH--H-------HHhCCCcEEEeCCcccHHHHHHHHhCCC
Confidence 368899999998 9999999985 789999999998765421 1 111122111111112333322 1
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+.+... +.+ .+.+..++++..++.++-
T Consensus 213 g~Dvvid~~g~-~~~-----~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 213 GADAAIDSIGG-PDG-----NELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp CEEEEEESSCH-HHH-----HHHHHTEEEEEEEEECCC
T ss_pred CCcEEEECCCC-hhH-----HHHHHHhcCCCEEEEEee
Confidence 47888887763 221 234567888888888864
No 431
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=94.19 E-value=0.055 Score=49.57 Aligned_cols=36 Identities=25% Similarity=0.159 Sum_probs=30.4
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCC
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~ 198 (386)
.+.||++.|.|. |.||+++|+.|+ .-|++|+..+++
T Consensus 5 ~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~~~ 41 (259)
T 3edm_A 5 RFTNRTIVVAGAGRDIGRACAIRFA-QEGANVVLTYNG 41 (259)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEECS
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEcCC
Confidence 588999999986 789999999985 679999988433
No 432
>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1
Probab=94.17 E-value=0.083 Score=50.36 Aligned_cols=69 Identities=13% Similarity=0.198 Sum_probs=43.3
Q ss_pred CeEEEEecChhHHHHHHHHHh-cCCcEE-EEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-----hCC
Q 016620 166 QTVGVIGAGRIGSAYARMMVE-GFKMNL-IYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----EAD 238 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~-~fg~~V-~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~aD 238 (386)
.+|||||+|.||+.+++.+.+ .-++++ .++|+++......+.+ ..+.. ....+.+++++ +.|
T Consensus 5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~-------~~g~~----~~~~~~e~ll~~~~~~~iD 73 (312)
T 1nvm_B 5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-------RMGVT----TTYAGVEGLIKLPEFADID 73 (312)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-------HTTCC----EESSHHHHHHHSGGGGGEE
T ss_pred CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH-------HcCCC----cccCCHHHHHhccCCCCCc
Confidence 479999999999999998744 346764 4567765431111111 11111 01245677754 579
Q ss_pred EEEEccC
Q 016620 239 VISLHPV 245 (386)
Q Consensus 239 iVvl~lP 245 (386)
+|+.|+|
T Consensus 74 vV~~atp 80 (312)
T 1nvm_B 74 FVFDATS 80 (312)
T ss_dssp EEEECSC
T ss_pred EEEECCC
Confidence 9999999
No 433
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=94.13 E-value=0.073 Score=43.63 Aligned_cols=99 Identities=14% Similarity=0.096 Sum_probs=65.3
Q ss_pred CeEEEEec----ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 166 QTVGVIGA----GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 166 ~~vgIvG~----G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
++|.|||. |..|..+.+.| +..|.+|+..+|..... . +...+.++.++-. -|+++
T Consensus 5 ~siAVVGaS~~~~~~g~~v~~~L-~~~g~~V~pVnP~~~~i-----------------~--G~~~y~sl~dlp~-vDlav 63 (122)
T 3ff4_A 5 KKTLILGATPETNRYAYLAAERL-KSHGHEFIPVGRKKGEV-----------------L--GKTIINERPVIEG-VDTVT 63 (122)
T ss_dssp CCEEEETCCSCTTSHHHHHHHHH-HHHTCCEEEESSSCSEE-----------------T--TEECBCSCCCCTT-CCEEE
T ss_pred CEEEEEccCCCCCCHHHHHHHHH-HHCCCeEEEECCCCCcC-----------------C--CeeccCChHHCCC-CCEEE
Confidence 57999998 57899999998 56788999999865321 1 1223456767666 89999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
+++|- +.+..++ ++..+ +...+++++.+- .++++.+.+++..+.
T Consensus 64 i~~p~-~~v~~~v-~e~~~-~g~k~v~~~~G~----~~~e~~~~a~~~Gir 107 (122)
T 3ff4_A 64 LYINP-QNQLSEY-NYILS-LKPKRVIFNPGT----ENEELEEILSENGIE 107 (122)
T ss_dssp ECSCH-HHHGGGH-HHHHH-HCCSEEEECTTC----CCHHHHHHHHHTTCE
T ss_pred EEeCH-HHHHHHH-HHHHh-cCCCEEEECCCC----ChHHHHHHHHHcCCe
Confidence 99994 3344444 33333 334466665432 356777777776554
No 434
>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}
Probab=94.12 E-value=0.19 Score=47.25 Aligned_cols=112 Identities=14% Similarity=0.135 Sum_probs=72.6
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEE
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVIS 241 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVv 241 (386)
.+.|++|.|+|-.......++.| ...|.+|.++.-.... ....+.....++.+.++++|+|+
T Consensus 4 ~~~~mki~v~~~~~~~~~~~~~L-~~~g~~v~~~~~~~~~-----------------~~~~g~~~~~~~~~~~~~~d~ii 65 (300)
T 2rir_A 4 MLTGLKIAVIGGDARQLEIIRKL-TEQQADIYLVGFDQLD-----------------HGFTGAVKCNIDEIPFQQIDSII 65 (300)
T ss_dssp CCCSCEEEEESBCHHHHHHHHHH-HHTTCEEEEESCTTSS-----------------CCCTTEEECCGGGSCGGGCSEEE
T ss_pred cccCCEEEEECCCHHHHHHHHHH-HhCCCEEEEEeccccc-----------------cccccceeccchHHHHhcCCEEE
Confidence 36788999999999999999988 5788998876421110 00011112345667788999998
Q ss_pred EccCCCh----------hhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcceEEe
Q 016620 242 LHPVLDK----------TTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMFRVGL 296 (386)
Q Consensus 242 l~lPlt~----------~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~gaal 296 (386)
...|... .+...++++.++.++++.+++ ++ +|..++.+++.+..+.-...
T Consensus 66 ~~~~~~~~~~~i~s~~a~~~~~~~~~~l~~~~~l~~i~-~g----~~~~d~~~~~~~~gi~v~~~ 125 (300)
T 2rir_A 66 LPVSATTGEGVVSTVFSNEEVVLKQDHLDRTPAHCVIF-SG----ISNAYLENIAAQAKRKLVKL 125 (300)
T ss_dssp CCSSCEETTTEECBSSCSSCEECCHHHHHTSCTTCEEE-ES----SCCHHHHHHHHHTTCCEEEG
T ss_pred eccccccCCcccccccccCCccchHHHHhhcCCCCEEE-Ee----cCCHHHHHHHHHCCCEEEee
Confidence 7544321 123347889999999988877 32 26677556666555555443
No 435
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=94.12 E-value=0.16 Score=50.83 Aligned_cols=90 Identities=16% Similarity=0.191 Sum_probs=62.2
Q ss_pred cccCCCeEEEEecC----------hhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCH
Q 016620 161 NLLKGQTVGVIGAG----------RIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM 230 (386)
Q Consensus 161 ~~l~g~~vgIvG~G----------~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 230 (386)
..+.|++|+|+|+. +-...+++.| +..|++|.+|||......... + +.......++
T Consensus 329 ~~l~g~~V~vlGlafK~~tdD~ReSpa~~ii~~L-~~~Ga~V~~~DP~~~~~~~~~---~----------~~~~~~~~~~ 394 (444)
T 3vtf_A 329 GGLRGRHVGVLGLAFKPNTDDVRESRGVEVARLL-LERGARVYVHDPMAMEKARAV---L----------GDSVTYVEDP 394 (444)
T ss_dssp TCCTTCEEEEECCSSSSSCCCCTTCHHHHHHHHH-HHTTCEEEEECSSTHHHHHHH---H----------GGGSEECSCH
T ss_pred cccCCCEEEEEeeecCCCCCccccCcHHHHHHHH-HHCCCEEEEECCCCChHHHHh---c----------CCCceecCCH
Confidence 35899999999985 2377889988 689999999999864432211 1 0112345789
Q ss_pred HHHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 231 DEVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 231 ~ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
+++++++|.|+++++- ++-+.+ + + ++.+++|. |+
T Consensus 395 ~~a~~~aDavvi~t~h-~ef~~l-d------~-~~~vv~D~-Rn 428 (444)
T 3vtf_A 395 QALLDQVEGVIIATAW-PQYEGL-D------Y-RGKVVVDG-RY 428 (444)
T ss_dssp HHHHHHCSEEEECSCC-GGGGGS-C------C-TTCEEEES-SC
T ss_pred HHHHhCCCEEEEccCC-HHHhCC-C------c-CCCEEEEC-CC
Confidence 9999999999999975 232222 1 2 36688884 53
No 436
>1v9l_A Glutamate dehydrogenase; protein-NAD complex, oxidoreductase; HET: NAD; 2.80A {Pyrobaculum islandicum} SCOP: c.2.1.7 c.58.1.1
Probab=94.12 E-value=0.25 Score=49.03 Aligned_cols=119 Identities=18% Similarity=0.272 Sum_probs=68.3
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEEE-EcCC---------hhhHHHHHHhhhhh--h--hhhcCCCCccccc
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLY---------QATRLEKFVTAYGQ--F--LKANGEQPVTWKR 226 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~-~d~~---------~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~ 226 (386)
.++.|++|.|.|+|++|+.+|+.| ...|++|+. .|.+ ....+.++.+.... . ....+. ...
T Consensus 206 ~~l~gk~vaVqG~GnVG~~aa~~L-~e~GakVVavsD~~G~i~dp~GlD~~~l~~~k~~~g~~~v~~y~~~~~----~~~ 280 (421)
T 1v9l_A 206 GGIEGKTVAIQGMGNVGRWTAYWL-EKMGAKVIAVSDINGVAYRKEGLNVELIQKNKGLTGPALVELFTTKDN----AEF 280 (421)
T ss_dssp SCCTTCEEEEECCSHHHHHHHHHH-HTTTCEEEEEECSSCEEECTTCCCTHHHHHTTTSCHHHHHHHHHHTSC----CCC
T ss_pred CCcCCCEEEEECcCHHHHHHHHHH-HHCCCEEEEEECCCcEEECCCCCCHHHHHHHHHhhCCccccccccccC----ceE
Confidence 479999999999999999999998 589999984 4441 11111111100000 0 000000 001
Q ss_pred cCCHHHHh-hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCcc
Q 016620 227 ASSMDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPMF 292 (386)
Q Consensus 227 ~~~l~ell-~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i~ 292 (386)
..+.++++ ..||+++-|.- .+.|+.+....++ -.+++-.+-+++- .++ .+.|.+..+.
T Consensus 281 ~~~~~~~~~~~~Dil~P~A~-----~~~I~~~~a~~l~-ak~V~EgAN~p~t-~~a-~~~l~~~Gi~ 339 (421)
T 1v9l_A 281 VKNPDAIFKLDVDIFVPAAI-----ENVIRGDNAGLVK-ARLVVEGANGPTT-PEA-ERILYERGVV 339 (421)
T ss_dssp CSSTTGGGGCCCSEEEECSC-----SSCBCTTTTTTCC-CSEEECCSSSCBC-HHH-HHHHHTTTCE
T ss_pred eCCchhhhcCCccEEEecCc-----CCccchhhHHHcC-ceEEEecCCCcCC-HHH-HHHHHHCCCE
Confidence 10223333 47999988873 4456666666664 3488888888864 333 3556665543
No 437
>4ekn_B Aspartate carbamoyltransferase; atcase, aspartate transcarbamoylase, pyrimidine biosynthesis thermostability, substrate channeling; 2.50A {Methanocaldococcus jannaschii} PDB: 3e2p_A 2rgw_A
Probab=94.10 E-value=0.6 Score=44.26 Aligned_cols=75 Identities=16% Similarity=0.332 Sum_probs=51.0
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhC
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREA 237 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~a 237 (386)
.+.|.+|+++|= |++..+.+..+ ..| |++|.+..|..-...+...+. .+..+ ..+....+++|.++++
T Consensus 148 ~l~glkva~vGD~~~~rva~Sl~~~~-~~~~G~~v~~~~P~~~~~~~~~~~~----~~~~g---~~~~~~~d~~eav~~a 219 (306)
T 4ekn_B 148 RIDGIKIAFVGDLKYGRTVHSLVYAL-SLFENVEMYFVSPKELRLPKDIIED----LKAKN---IKFYEKESLDDLDDDI 219 (306)
T ss_dssp CSTTCEEEEESCTTTCHHHHHHHHHH-HTSSSCEEEEECCGGGCCCHHHHHH----HHHTT---CCEEEESCGGGCCTTC
T ss_pred CcCCCEEEEEcCCCCCcHHHHHHHHH-HhcCCCEEEEECCcccccCHHHHHH----HHHcC---CEEEEEcCHHHHhcCC
Confidence 378999999997 58999999987 579 999999987532111111110 11111 2233457899999999
Q ss_pred CEEEEcc
Q 016620 238 DVISLHP 244 (386)
Q Consensus 238 DiVvl~l 244 (386)
|+|....
T Consensus 220 Dvvy~~~ 226 (306)
T 4ekn_B 220 DVLYVTR 226 (306)
T ss_dssp SEEEECC
T ss_pred CEEEeCC
Confidence 9998754
No 438
>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*
Probab=94.07 E-value=0.048 Score=50.00 Aligned_cols=37 Identities=22% Similarity=0.193 Sum_probs=32.3
Q ss_pred ccCCCeEEEEec---ChhHHHHHHHHHhcCCcEEEEEcCCh
Q 016620 162 LLKGQTVGVIGA---GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
Q Consensus 162 ~l~g~~vgIvG~---G~IG~~iA~~L~~~fg~~V~~~d~~~ 199 (386)
.+.|+++.|.|. |.||+++|+.|+ ..|++|+..+|+.
T Consensus 6 ~l~~k~vlVTGas~~~gIG~~ia~~l~-~~G~~V~~~~r~~ 45 (265)
T 1qsg_A 6 FLSGKRILVTGVASKLSIAYGIAQAMH-REGAELAFTYQND 45 (265)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHH-HTTCEEEEEESST
T ss_pred ccCCCEEEEECCCCCCCHHHHHHHHHH-HCCCEEEEEcCcH
Confidence 378999999997 699999999985 6799999998875
No 439
>4gmf_A Yersiniabactin biosynthetic protein YBTU; rossmann fold, NADPH dependent thiazoline reductase, oxidore; HET: EPE; 1.85A {Yersinia enterocolitica subsp} PDB: 4gmg_A*
Probab=94.04 E-value=0.047 Score=53.39 Aligned_cols=67 Identities=18% Similarity=0.223 Sum_probs=45.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcC--CcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEE
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGF--KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISL 242 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~f--g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl 242 (386)
.+|||+|.| +|+.-++.+ +.. ++++. ++|++... .+++.+.| +. ..+.++++++++.|+|++
T Consensus 8 ~rv~VvG~G-~g~~h~~a~-~~~~~~~elvav~~~~~~~-a~~~a~~~-------gv-----~~~~~~~~l~~~~D~v~i 72 (372)
T 4gmf_A 8 QRVLIVGAK-FGEMYLNAF-MQPPEGLELVGLLAQGSAR-SRELAHAF-------GI-----PLYTSPEQITGMPDIACI 72 (372)
T ss_dssp EEEEEECST-TTHHHHHTT-SSCCTTEEEEEEECCSSHH-HHHHHHHT-------TC-----CEESSGGGCCSCCSEEEE
T ss_pred CEEEEEehH-HHHHHHHHH-HhCCCCeEEEEEECCCHHH-HHHHHHHh-------CC-----CEECCHHHHhcCCCEEEE
Confidence 579999999 799877765 333 67866 56877643 22322222 21 235789999999999999
Q ss_pred ccCCC
Q 016620 243 HPVLD 247 (386)
Q Consensus 243 ~lPlt 247 (386)
++|..
T Consensus 73 ~~p~~ 77 (372)
T 4gmf_A 73 VVRST 77 (372)
T ss_dssp CCC--
T ss_pred ECCCc
Confidence 99864
No 440
>3oa2_A WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD; 1.50A {Pseudomonas aeruginosa}
Probab=94.03 E-value=0.074 Score=50.61 Aligned_cols=67 Identities=19% Similarity=0.263 Sum_probs=45.9
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh---------
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL--------- 234 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell--------- 234 (386)
.++||||+ |.||+..++.+ +..+.++. ++|++.... .+ ... .+ ....+.++++++
T Consensus 4 irvgiIG~gG~i~~~h~~~l-~~~~~~lvav~d~~~~~~--~~--------~~~--~~-~~~~~~~~~~ll~~~~~l~~~ 69 (318)
T 3oa2_A 4 KNFALIGAAGYIAPRHMRAI-KDTGNCLVSAYDINDSVG--II--------DSI--SP-QSEFFTEFEFFLDHASNLKRD 69 (318)
T ss_dssp CEEEEETTTSSSHHHHHHHH-HHTTCEEEEEECSSCCCG--GG--------GGT--CT-TCEEESSHHHHHHHHHHHTTS
T ss_pred eEEEEECCCcHHHHHHHHHH-HhCCCEEEEEEcCCHHHH--HH--------Hhh--CC-CCcEECCHHHHHHhhhhhhhc
Confidence 47999999 78999999987 45688754 667765431 10 000 11 123457888887
Q ss_pred --hhCCEEEEccCC
Q 016620 235 --READVISLHPVL 246 (386)
Q Consensus 235 --~~aDiVvl~lPl 246 (386)
.+.|+|++|+|.
T Consensus 70 ~~~~vD~V~I~tP~ 83 (318)
T 3oa2_A 70 SATALDYVSICSPN 83 (318)
T ss_dssp TTTSCCEEEECSCG
T ss_pred cCCCCcEEEECCCc
Confidence 568999999995
No 441
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=94.00 E-value=0.041 Score=52.65 Aligned_cols=95 Identities=13% Similarity=0.105 Sum_probs=56.4
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcC--CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccccc-CC-HHHHhh--hC
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRA-SS-MDEVLR--EA 237 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~f--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-l~ell~--~a 237 (386)
.|.+|.|+|.|.||...++.+ +.+ |++|++.+++..... + +++.+......... .+ .+++.. ..
T Consensus 170 ~g~~VlV~GaG~vG~~aiqla-k~~~~Ga~Vi~~~~~~~~~~--~-------~~~lGa~~vi~~~~~~~~~~~~~~g~g~ 239 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQIL-KALMKNITIVGISRSKKHRD--F-------ALELGADYVSEMKDAESLINKLTDGLGA 239 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHH-HHHCTTCEEEEECSCHHHHH--H-------HHHHTCSEEECHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHhcCCCEEEEEeCCHHHHH--H-------HHHhCCCEEeccccchHHHHHhhcCCCc
Confidence 788999999999999999975 788 999999998764421 1 11112211100000 01 112211 46
Q ss_pred CEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 238 DVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 238 DiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+|+-+... +.+ -...++.++++..++.++.
T Consensus 240 D~vid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 270 (344)
T 2h6e_A 240 SIAIDLVGT-EET----TYNLGKLLAQEGAIILVGM 270 (344)
T ss_dssp EEEEESSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred cEEEECCCC-hHH----HHHHHHHhhcCCEEEEeCC
Confidence 888877763 111 1445666777777777653
No 442
>2x0j_A Malate dehydrogenase; oxidoreductase, hyperthermophilic, tricarboxylic acid cycle; HET: ENA; 2.79A {Archaeoglobus fulgidus dsm 4304} PDB: 2x0i_A*
Probab=93.96 E-value=0.13 Score=48.55 Aligned_cols=112 Identities=14% Similarity=0.178 Sum_probs=59.7
Q ss_pred CeEEEEecChhHHHHHHHHH-hcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 166 QTVGVIGAGRIGSAYARMMV-EGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~-~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
++|+|||.|.||+.+|-.|+ ++.--++..||.......-.-.+..+... ..... .......+. +.++.||+|+++.
T Consensus 1 MKV~IiGaG~VG~~~a~~l~~~~~~~el~L~Di~~~~~~G~a~DL~h~~~-~~~~~-~~i~~~~d~-~~~~~aDvVvitA 77 (294)
T 2x0j_A 1 MKLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAA-GIDKY-PKIVGGADY-SLLKGSEIIVVTA 77 (294)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHG-GGTCC-CEEEEESCG-GGGTTCSEEEECC
T ss_pred CEEEEECcCHHHHHHHHHHHhCCCCCEEEEEeCCCCcchhhhhhhhcccc-cCCCC-CeEecCCCH-HHhCCCCEEEEec
Confidence 57999999999999997653 34545899999876432211122110000 00101 111112233 5689999999986
Q ss_pred --CCCh-hhhh-cc--cH-------HHHhcCCCCcEEEEcCCCcccCHHHH
Q 016620 245 --VLDK-TTYH-LI--NK-------ERLATMKKEAILVNCSRGPVIDEVAL 282 (386)
Q Consensus 245 --Plt~-~t~~-li--~~-------~~~~~mk~gailIN~aRg~~vde~aL 282 (386)
|..| .|+. ++ |. +.+..-.|.++++.++- .+|.-..
T Consensus 78 G~prkpGmtR~dLl~~Na~I~~~i~~~i~~~~p~aivlvvsN--Pvd~~t~ 126 (294)
T 2x0j_A 78 GLARKPGMTRLDLAHKNAGIIKDIAKKIVENAPESKILVVTN--PMDVMTY 126 (294)
T ss_dssp CCCCCSSSCHHHHHHHHHHHHHHHHHHHHTTSTTCEEEECSS--SHHHHHH
T ss_pred CCCCCCCCchHHHHHHHHHHHHHHHHHHHhcCCceEEEEecC--cchhhHH
Confidence 3333 2321 21 11 12333456778877754 3444333
No 443
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=93.95 E-value=0.12 Score=49.41 Aligned_cols=95 Identities=14% Similarity=0.130 Sum_probs=59.4
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcC-CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHH----Hhh--
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGF-KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDE----VLR-- 235 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~f-g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e----ll~-- 235 (386)
-.|.+|.|+|.|.+|...++.+ +.. |.+|++.+++..... + .++.+....... ..++.+ +..
T Consensus 170 ~~g~~vlv~GaG~vG~~a~qla-~~~g~~~Vi~~~~~~~~~~--~-------~~~lGa~~~i~~-~~~~~~~v~~~t~g~ 238 (345)
T 3jv7_A 170 GPGSTAVVIGVGGLGHVGIQIL-RAVSAARVIAVDLDDDRLA--L-------AREVGADAAVKS-GAGAADAIRELTGGQ 238 (345)
T ss_dssp CTTCEEEEECCSHHHHHHHHHH-HHHCCCEEEEEESCHHHHH--H-------HHHTTCSEEEEC-STTHHHHHHHHHGGG
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHH--H-------HHHcCCCEEEcC-CCcHHHHHHHHhCCC
Confidence 3588999999999999999875 666 789999998765421 1 222232221111 113322 222
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+-+.... .+ -...++.++++..++.++-
T Consensus 239 g~d~v~d~~G~~-~~----~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 239 GATAVFDFVGAQ-ST----IDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp CEEEEEESSCCH-HH----HHHHHHHEEEEEEEEECSC
T ss_pred CCeEEEECCCCH-HH----HHHHHHHHhcCCEEEEECC
Confidence 589999888742 11 1445666777777777753
No 444
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=93.94 E-value=0.089 Score=52.87 Aligned_cols=72 Identities=19% Similarity=0.276 Sum_probs=47.5
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCC---HHHH-hhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASS---MDEV-LREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---l~el-l~~aDiV 240 (386)
.++|-|+|+|.+|+.+|+.| ..-|.+|.+.|.++... +...+.+ +.. .......+ |+++ +++||.+
T Consensus 3 ~M~iiI~G~G~vG~~la~~L-~~~~~~v~vId~d~~~~-~~~~~~~-------~~~-~i~Gd~~~~~~L~~Agi~~ad~~ 72 (461)
T 4g65_A 3 AMKIIILGAGQVGGTLAENL-VGENNDITIVDKDGDRL-RELQDKY-------DLR-VVNGHASHPDVLHEAGAQDADML 72 (461)
T ss_dssp CEEEEEECCSHHHHHHHHHT-CSTTEEEEEEESCHHHH-HHHHHHS-------SCE-EEESCTTCHHHHHHHTTTTCSEE
T ss_pred cCEEEEECCCHHHHHHHHHH-HHCCCCEEEEECCHHHH-HHHHHhc-------CcE-EEEEcCCCHHHHHhcCCCcCCEE
Confidence 56899999999999999998 68899999999886542 1111111 110 00111222 3443 6889999
Q ss_pred EEccCC
Q 016620 241 SLHPVL 246 (386)
Q Consensus 241 vl~lPl 246 (386)
+.+++.
T Consensus 73 ia~t~~ 78 (461)
T 4g65_A 73 VAVTNT 78 (461)
T ss_dssp EECCSC
T ss_pred EEEcCC
Confidence 888875
No 445
>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*
Probab=93.93 E-value=0.11 Score=49.38 Aligned_cols=36 Identities=19% Similarity=0.044 Sum_probs=29.4
Q ss_pred cCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCCh
Q 016620 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
Q Consensus 163 l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~ 199 (386)
...++|.|.|. |.||+.+++.|. ..|.+|++.+|+.
T Consensus 8 M~~~~IlVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~ 44 (346)
T 3i6i_A 8 SPKGRVLIAGATGFIGQFVATASL-DAHRPTYILARPG 44 (346)
T ss_dssp ---CCEEEECTTSHHHHHHHHHHH-HTTCCEEEEECSS
T ss_pred CCCCeEEEECCCcHHHHHHHHHHH-HCCCCEEEEECCC
Confidence 34678999998 999999999984 6789999999875
No 446
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=93.91 E-value=0.096 Score=50.02 Aligned_cols=37 Identities=19% Similarity=0.166 Sum_probs=32.6
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
.|++|.|+|. |.||..+++.+ +..|++|++.+++...
T Consensus 166 ~g~~vlV~Gasg~iG~~~~~~a-~~~G~~Vi~~~~~~~~ 203 (343)
T 2eih_A 166 PGDDVLVMAAGSGVSVAAIQIA-KLFGARVIATAGSEDK 203 (343)
T ss_dssp TTCEEEECSTTSTTHHHHHHHH-HHTTCEEEEEESSHHH
T ss_pred CCCEEEEECCCchHHHHHHHHH-HHCCCEEEEEeCCHHH
Confidence 5889999999 99999999986 7899999999987543
No 447
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=93.90 E-value=0.05 Score=51.95 Aligned_cols=90 Identities=9% Similarity=0.135 Sum_probs=57.1
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccC---CHHHH-hhhCCEE
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRAS---SMDEV-LREADVI 240 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~l~el-l~~aDiV 240 (386)
.+++.|+|+|.+|+.+++.| ...|. |.+.|++++... . +..+. ........ .|+++ +++||.|
T Consensus 115 ~~~viI~G~G~~g~~l~~~L-~~~g~-v~vid~~~~~~~--~--------~~~~~-~~i~gd~~~~~~L~~a~i~~a~~v 181 (336)
T 1lnq_A 115 SRHVVICGWSESTLECLREL-RGSEV-FVLAEDENVRKK--V--------LRSGA-NFVHGDPTRVSDLEKANVRGARAV 181 (336)
T ss_dssp -CEEEEESCCHHHHHHHTTG-GGSCE-EEEESCGGGHHH--H--------HHTTC-EEEESCTTSHHHHHHTCSTTEEEE
T ss_pred cCCEEEECCcHHHHHHHHHH-HhCCc-EEEEeCChhhhh--H--------HhCCc-EEEEeCCCCHHHHHhcChhhccEE
Confidence 56899999999999999997 67888 999998765421 1 11111 11111122 23344 6789999
Q ss_pred EEccCCChhhhhcccHHHHhcCCCCcEEE
Q 016620 241 SLHPVLDKTTYHLINKERLATMKKEAILV 269 (386)
Q Consensus 241 vl~lPlt~~t~~li~~~~~~~mk~gailI 269 (386)
+++++.+ ..++.-....+.+.+...++
T Consensus 182 i~~~~~d--~~n~~~~~~ar~~~~~~~ii 208 (336)
T 1lnq_A 182 IVDLESD--SETIHCILGIRKIDESVRII 208 (336)
T ss_dssp EECCSSH--HHHHHHHHHHHTTCTTSEEE
T ss_pred EEcCCcc--HHHHHHHHHHHHHCCCCeEE
Confidence 9999853 34444456667777764443
No 448
>2o3j_A UDP-glucose 6-dehydrogenase; structural genomics, PSI-2, prote structure initiative, NEW YORK SGX research center for STRU genomics; 1.88A {Caenorhabditis elegans}
Probab=93.84 E-value=0.29 Score=49.35 Aligned_cols=111 Identities=14% Similarity=0.088 Sum_probs=69.6
Q ss_pred ccCCCeEEEEec----------ChhHHHHHHHHHhcCCcEEEEEcCChhhHH--HHHHhhhhhhhhhcCCCCccccccCC
Q 016620 162 LLKGQTVGVIGA----------GRIGSAYARMMVEGFKMNLIYYDLYQATRL--EKFVTAYGQFLKANGEQPVTWKRASS 229 (386)
Q Consensus 162 ~l~g~~vgIvG~----------G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (386)
.+.|++|+|+|+ .+-...+++.| ...|++|.+|||...... ..+...++..... .......+
T Consensus 332 ~~~~~~v~vlGlafK~~~dd~R~Spa~~i~~~L-~~~g~~v~~~DP~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 405 (481)
T 2o3j_A 332 TVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHL-MEEHAKLSVYDPKVQKSQMLNDLASVTSAQDVE-----RLITVESD 405 (481)
T ss_dssp CCTTCEEEEECCSSSTTCCCCTTCHHHHHHHHH-HHTTCEEEEECSSSCHHHHHHHHHHHSCHHHHH-----HHEEEESS
T ss_pred ccCCCeEEEEeeeeCCCCCccccChHHHHHHHH-HHCCCEEEEECCCCCchhhHHHHHhhhcccccc-----CceeecCC
Confidence 479999999997 35778899988 688999999999864321 1110000000000 00112357
Q ss_pred HHHHhhhCCEEEEccCCChhhhhcccHH-HHhcCCCCcEEEEcCCCcccCHHHH
Q 016620 230 MDEVLREADVISLHPVLDKTTYHLINKE-RLATMKKEAILVNCSRGPVIDEVAL 282 (386)
Q Consensus 230 l~ell~~aDiVvl~lPlt~~t~~li~~~-~~~~mk~gailIN~aRg~~vde~aL 282 (386)
+.+.++.+|.|++++.- ++-+. ++-+ ..+.|+...+++|. |+ +.|.+.+
T Consensus 406 ~~~~~~~ad~~vi~t~~-~~f~~-~~~~~~~~~~~~~~~i~D~-r~-~~~~~~~ 455 (481)
T 2o3j_A 406 PYAAARGAHAIVVLTEW-DEFVE-LNYSQIHNDMQHPAAIFDG-RL-ILDQKAL 455 (481)
T ss_dssp HHHHHTTCSEEEECSCC-GGGTT-SCHHHHHHHSCSSCEEEES-SS-CSCHHHH
T ss_pred HHHHHcCCCEEEEcCCc-HHhhc-cCHHHHHHhcCCCCEEEEC-CC-CCCHHHH
Confidence 78899999999999985 33333 3444 44567776688886 54 4565543
No 449
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=93.84 E-value=0.073 Score=50.78 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=59.2
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhh-hcCCCCccc-cccCCHHHHhh-----
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLK-ANGEQPVTW-KRASSMDEVLR----- 235 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~l~ell~----- 235 (386)
.|++|.|+|. |.||..+++.+ +..|++|++.+++...... ++ ..+...... ....++.+.+.
T Consensus 155 ~g~~vlI~Ga~g~iG~~~~~~a-~~~G~~V~~~~~~~~~~~~---------~~~~~g~~~~~d~~~~~~~~~~~~~~~~~ 224 (345)
T 2j3h_A 155 EGETVYVSAASGAVGQLVGQLA-KMMGCYVVGSAGSKEKVDL---------LKTKFGFDDAFNYKEESDLTAALKRCFPN 224 (345)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESSHHHHHH---------HHHTSCCSEEEETTSCSCSHHHHHHHCTT
T ss_pred CCCEEEEECCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHHH---------HHHHcCCceEEecCCHHHHHHHHHHHhCC
Confidence 6889999997 99999999986 7899999999987643211 11 112211100 01123333332
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+.+... . .-...++.++++..++.++-
T Consensus 225 ~~d~vi~~~g~--~----~~~~~~~~l~~~G~~v~~G~ 256 (345)
T 2j3h_A 225 GIDIYFENVGG--K----MLDAVLVNMNMHGRIAVCGM 256 (345)
T ss_dssp CEEEEEESSCH--H----HHHHHHTTEEEEEEEEECCC
T ss_pred CCcEEEECCCH--H----HHHHHHHHHhcCCEEEEEcc
Confidence 47888887752 1 12556777888888887754
No 450
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=93.79 E-value=0.27 Score=47.19 Aligned_cols=95 Identities=18% Similarity=0.124 Sum_probs=60.2
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccc-----cCCHHHHh---
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKR-----ASSMDEVL--- 234 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~l~ell--- 234 (386)
.|.+|.|+|.|.+|...++.+ +.+|++ |++.+++..... +. ++. ........ ..++.+.+
T Consensus 179 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~a-------~~l-~~~~~~~~~~~~~~~~~~~~v~~~ 247 (363)
T 3m6i_A 179 LGDPVLICGAGPIGLITMLCA-KAAGACPLVITDIDEGRLK--FA-------KEI-CPEVVTHKVERLSAEESAKKIVES 247 (363)
T ss_dssp TTCCEEEECCSHHHHHHHHHH-HHTTCCSEEEEESCHHHHH--HH-------HHH-CTTCEEEECCSCCHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEECCCHHHHH--HH-------HHh-chhcccccccccchHHHHHHHHHH
Confidence 578999999999999999985 899998 898887765421 11 111 10100000 01222222
Q ss_pred ---hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 235 ---READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 235 ---~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
...|+|+-+... +.+ -...++.++++..++.++-.
T Consensus 248 t~g~g~Dvvid~~g~-~~~----~~~~~~~l~~~G~iv~~G~~ 285 (363)
T 3m6i_A 248 FGGIEPAVALECTGV-ESS----IAAAIWAVKFGGKVFVIGVG 285 (363)
T ss_dssp TSSCCCSEEEECSCC-HHH----HHHHHHHSCTTCEEEECCCC
T ss_pred hCCCCCCEEEECCCC-hHH----HHHHHHHhcCCCEEEEEccC
Confidence 258999998873 211 14567789999999988753
No 451
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=93.76 E-value=0.11 Score=49.84 Aligned_cols=37 Identities=27% Similarity=0.483 Sum_probs=32.7
Q ss_pred CCCeEEEE-ecChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 164 KGQTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 164 ~g~~vgIv-G~G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
.|++|.|+ |.|.||...++.+ +.+|++|++.+++...
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla-~~~Ga~Vi~~~~~~~~ 187 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIA-KAYGLRVITTASRNET 187 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHH-HHTTCEEEEECCSHHH
T ss_pred CCCEEEEEcCCCHHHHHHHHHH-HHcCCEEEEEeCCHHH
Confidence 68999999 7999999999985 7999999999987644
No 452
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=93.72 E-value=0.09 Score=51.11 Aligned_cols=37 Identities=24% Similarity=0.248 Sum_probs=32.3
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCC-cEEEEEcCChhh
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFK-MNLIYYDLYQAT 201 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg-~~V~~~d~~~~~ 201 (386)
.|.+|.|+|.|.+|...++.+ +.+| .+|++.+++...
T Consensus 195 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~ 232 (380)
T 1vj0_A 195 AGKTVVIQGAGPLGLFGVVIA-RSLGAENVIVIAGSPNR 232 (380)
T ss_dssp BTCEEEEECCSHHHHHHHHHH-HHTTBSEEEEEESCHHH
T ss_pred CCCEEEEECcCHHHHHHHHHH-HHcCCceEEEEcCCHHH
Confidence 578999999999999999985 7899 599999987654
No 453
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=93.71 E-value=0.17 Score=48.38 Aligned_cols=92 Identities=14% Similarity=0.086 Sum_probs=59.1
Q ss_pred CeEEEE-ecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh------hhCC
Q 016620 166 QTVGVI-GAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL------READ 238 (386)
Q Consensus 166 ~~vgIv-G~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell------~~aD 238 (386)
++|.|. |.|.||...++.+ +.+|++|++.+++..... + +++.+..........++.+.+ ...|
T Consensus 166 ~~vli~gg~g~vG~~a~qla-~~~Ga~Vi~~~~~~~~~~--~-------~~~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D 235 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLA-KEEGFRPIVTVRRDEQIA--L-------LKDIGAAHVLNEKAPDFEATLREVMKAEQPR 235 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHH-HHHTCEEEEEESCGGGHH--H-------HHHHTCSEEEETTSTTHHHHHHHHHHHHCCC
T ss_pred CEEEEeCCCcHHHHHHHHHH-HHCCCEEEEEeCCHHHHH--H-------HHHcCCCEEEECCcHHHHHHHHHHhcCCCCc
Confidence 567665 8999999999985 789999999998665421 1 112222211111123333332 2589
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
+|+-|... + . + ...+..++++..++.++.
T Consensus 236 ~vid~~g~-~---~-~-~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 236 IFLDAVTG-P---L-A-SAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEEESSCH-H---H-H-HHHHHHSCTTCEEEECCC
T ss_pred EEEECCCC-h---h-H-HHHHhhhcCCCEEEEEec
Confidence 99988863 1 1 1 567888999999999874
No 454
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=93.70 E-value=0.14 Score=47.97 Aligned_cols=82 Identities=15% Similarity=0.114 Sum_probs=50.2
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCC---CccccccCCHHHHhhhC
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQ---PVTWKRASSMDEVLREA 237 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~l~ell~~a 237 (386)
.+.|++|.|.|. |-||+.+++.|+ ..|.+|++.+|+..... .....+.. ....... ........+++++++.+
T Consensus 8 ~~~~~~vlVTGatG~iG~~l~~~L~-~~g~~V~~~~r~~~~~~-~~~~~~~~-~~~~~~~~~~~~D~~d~~~~~~~~~~~ 84 (342)
T 1y1p_A 8 LPEGSLVLVTGANGFVASHVVEQLL-EHGYKVRGTARSASKLA-NLQKRWDA-KYPGRFETAVVEDMLKQGAYDEVIKGA 84 (342)
T ss_dssp SCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHHHH-HHHHHHHH-HSTTTEEEEECSCTTSTTTTTTTTTTC
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH-HCCCEEEEEeCCcccHH-HHHHHhhc-cCCCceEEEEecCCcChHHHHHHHcCC
Confidence 468899999998 999999999984 67999999998764321 10000000 0000000 00111234566777889
Q ss_pred CEEEEccCC
Q 016620 238 DVISLHPVL 246 (386)
Q Consensus 238 DiVvl~lPl 246 (386)
|+|+.+...
T Consensus 85 d~vih~A~~ 93 (342)
T 1y1p_A 85 AGVAHIASV 93 (342)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeCCC
Confidence 999887654
No 455
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=93.70 E-value=0.086 Score=48.91 Aligned_cols=41 Identities=20% Similarity=0.195 Sum_probs=35.1
Q ss_pred ccccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 160 GNLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 160 g~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
..++.||++.|.|. |.||+++|+.|+ ..|++|++.+++...
T Consensus 22 ~~~l~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~~ 63 (277)
T 4dqx_A 22 SMDLNQRVCIVTGGGSGIGRATAELFA-KNGAYVVVADVNEDA 63 (277)
T ss_dssp CCTTTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESSHHH
T ss_pred cCCCCCCEEEEECCCcHHHHHHHHHHH-HCCCEEEEEeCCHHH
Confidence 35689999999986 789999999985 789999999987654
No 456
>3upl_A Oxidoreductase; rossmann fold, NADPH binding; 1.50A {Brucella melitensis biovar abortus 230ORGANISM_TAXID} PDB: 3upy_A*
Probab=93.67 E-value=0.15 Score=51.08 Aligned_cols=121 Identities=17% Similarity=0.142 Sum_probs=64.6
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhh-hh-----------hhhhcCCCCccccccCCHHH
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAY-GQ-----------FLKANGEQPVTWKRASSMDE 232 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~-~~-----------~~~~~~~~~~~~~~~~~l~e 232 (386)
.+|||||+|.||+.+++.+.+.-++++. ++|++..... .+.+.+ +. .+..... ......+.++++
T Consensus 24 IRVGIIGaG~iG~~~~~~l~~~~~veLvAV~D~~~era~-~~a~~~yG~~~~~~~~~~~~~i~~a~~-~g~~~v~~D~ee 101 (446)
T 3upl_A 24 IRIGLIGAGEMGTDIVTQVARMQGIEVGALSARRLPNTF-KAIRTAYGDEENAREATTESAMTRAIE-AGKIAVTDDNDL 101 (446)
T ss_dssp EEEEEECCSHHHHHHHHHHTTSSSEEEEEEECSSTHHHH-HHHHHHHSSSTTEEECSSHHHHHHHHH-TTCEEEESCHHH
T ss_pred eEEEEECChHHHHHHHHHHhhCCCcEEEEEEeCCHHHHH-HHHHHhcCCccccccccchhhhhhhhc-cCCceEECCHHH
Confidence 4699999999999999887444577755 5677665432 221111 10 0000000 001223578999
Q ss_pred Hhh--hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEE--EcCCCcccCHHHHHHHHHcCCcce
Q 016620 233 VLR--EADVISLHPVLDKTTYHLINKERLATMKKEAILV--NCSRGPVIDEVALVEHLKQNPMFR 293 (386)
Q Consensus 233 ll~--~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailI--N~aRg~~vde~aL~~aL~~g~i~g 293 (386)
+++ +.|+|++++|.. .... +-.+..++.|.-++ |.+- ...+-+.|.++.++..+.-
T Consensus 102 LL~d~dIDaVviaTp~p-~~H~---e~a~~AL~AGKHVv~~nk~l-~~~eg~eL~~~A~e~Gvvl 161 (446)
T 3upl_A 102 ILSNPLIDVIIDATGIP-EVGA---ETGIAAIRNGKHLVMMNVEA-DVTIGPYLKAQADKQGVIY 161 (446)
T ss_dssp HHTCTTCCEEEECSCCH-HHHH---HHHHHHHHTTCEEEECCHHH-HHHHHHHHHHHHHHHTCCE
T ss_pred HhcCCCCCEEEEcCCCh-HHHH---HHHHHHHHcCCcEEecCccc-CHHHHHHHHHHHHHhCCee
Confidence 997 489999999853 2211 11223344444333 4321 1223356677666654443
No 457
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=93.65 E-value=0.12 Score=48.35 Aligned_cols=39 Identities=18% Similarity=0.233 Sum_probs=33.7
Q ss_pred cccccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCC
Q 016620 159 VGNLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (386)
Q Consensus 159 ~g~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~ 198 (386)
+...+.||++.|.|. |.||+++|+.|+ ..|++|++.|++
T Consensus 22 m~~~l~gk~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~ 61 (299)
T 3t7c_A 22 MAGKVEGKVAFITGAARGQGRSHAITLA-REGADIIAIDVC 61 (299)
T ss_dssp CCCTTTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEECC
T ss_pred cccccCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEecc
Confidence 345689999999987 789999999985 789999999876
No 458
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=93.65 E-value=0.046 Score=51.14 Aligned_cols=74 Identities=20% Similarity=0.145 Sum_probs=44.4
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
.+|+|+|+ |.||+.+++.+...-++++. ++|+........ + .....+..........++++++..+|+|+-+
T Consensus 6 mkV~V~Ga~G~mG~~~~~~~~~~~~~elva~~d~~~~~~~g~--d----~~~~~g~~~~~v~~~~dl~~~l~~~DvVIDf 79 (273)
T 1dih_A 6 IRVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS--D----AGELAGAGKTGVTVQSSLDAVKDDFDVFIDF 79 (273)
T ss_dssp EEEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC--C----TTCSSSSSCCSCCEESCSTTTTTSCSEEEEC
T ss_pred cEEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCchhhhhh--h----HHHHcCCCcCCceecCCHHHHhcCCCEEEEc
Confidence 58999999 99999999976545678876 667654210000 0 0000011111122245778888899999955
Q ss_pred cC
Q 016620 244 PV 245 (386)
Q Consensus 244 lP 245 (386)
++
T Consensus 80 t~ 81 (273)
T 1dih_A 80 TR 81 (273)
T ss_dssp SC
T ss_pred CC
Confidence 53
No 459
>3h9e_O Glyceraldehyde-3-phosphate dehydrogenase, testis-; oxidoreductase, structural genomics, structural genomics CON SGC, glycolysis, NAD; HET: NAD; 1.72A {Homo sapiens} PDB: 3pfw_O* 2vyn_D* 2vyv_D*
Probab=93.65 E-value=0.074 Score=51.32 Aligned_cols=44 Identities=25% Similarity=0.360 Sum_probs=32.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCcEEEE-EcCChhhHHHHHHhhh
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKMNLIY-YDLYQATRLEKFVTAY 210 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~~V~~-~d~~~~~~~~~~~~~~ 210 (386)
.+|||.|||+||+.++|++ ..+|++|.+ +|+......-.+.-.|
T Consensus 8 ~kvgInGFGRIGrlv~R~~-~~~~veivainDp~~d~~~~a~l~~y 52 (346)
T 3h9e_O 8 LTVGINGFGRIGRLVLRAC-MEKGVKVVAVNDPFIDPEYMVYMFKY 52 (346)
T ss_dssp CEEEEECCSHHHHHHHHHH-HHTTCEEEEEECTTCCHHHHHHHHHC
T ss_pred eEEEEECCChHHHHHHHHH-HhCCCEEEEEeCCCCChhHhcccccc
Confidence 4799999999999999985 678899887 6765443333343334
No 460
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=93.65 E-value=0.039 Score=50.46 Aligned_cols=36 Identities=19% Similarity=0.071 Sum_probs=31.4
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCC
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLY 198 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~ 198 (386)
.+.|+++.|.|. |.||+++|+.|+ ..|++|++.+++
T Consensus 18 ~~~~k~vlItGasggiG~~la~~l~-~~G~~v~~~~r~ 54 (274)
T 1ja9_A 18 PLAGKVALTTGAGRGIGRGIAIELG-RRGASVVVNYGS 54 (274)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHH-HTTCEEEEEESS
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHH-HCCCEEEEEcCC
Confidence 578999999986 899999999985 679999999883
No 461
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=93.64 E-value=0.1 Score=49.61 Aligned_cols=36 Identities=17% Similarity=0.124 Sum_probs=31.8
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.|++|.|.|. |.||..+++.+ +..|++|++.+++..
T Consensus 145 ~g~~vlV~Ga~ggiG~~~~~~a-~~~G~~Vi~~~~~~~ 181 (333)
T 1wly_A 145 PGDYVLIHAAAGGMGHIMVPWA-RHLGATVIGTVSTEE 181 (333)
T ss_dssp TTCEEEETTTTSTTHHHHHHHH-HHTTCEEEEEESSHH
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHCCCEEEEEeCCHH
Confidence 5789999995 99999999986 689999999998764
No 462
>2yv1_A Succinyl-COA ligase [ADP-forming] subunit alpha; COA-binding domain, structural genomics, NPPSFA; 1.70A {Methanocaldococcus jannaschii}
Probab=93.60 E-value=0.075 Score=50.24 Aligned_cols=104 Identities=15% Similarity=0.104 Sum_probs=63.0
Q ss_pred CeEEEEec-ChhHHHHHHHHHhcCCcE-EEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh--hCCEEE
Q 016620 166 QTVGVIGA-GRIGSAYARMMVEGFKMN-LIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR--EADVIS 241 (386)
Q Consensus 166 ~~vgIvG~-G~IG~~iA~~L~~~fg~~-V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~--~aDiVv 241 (386)
.++.|+|. |.+|+.+++.+ +..|++ |...+|..... + . .+...+.+++++.. ..|+++
T Consensus 14 ~~v~V~Gasg~~G~~~~~~l-~~~g~~~V~~VnP~~~g~-------------~--i--~G~~vy~sl~el~~~~~~Dv~i 75 (294)
T 2yv1_A 14 TKAIVQGITGRQGSFHTKKM-LECGTKIVGGVTPGKGGQ-------------N--V--HGVPVFDTVKEAVKETDANASV 75 (294)
T ss_dssp CCEEEETTTSHHHHHHHHHH-HHTTCCEEEEECTTCTTC-------------E--E--TTEEEESSHHHHHHHHCCCEEE
T ss_pred CEEEEECCCCCHHHHHHHHH-HhCCCeEEEEeCCCCCCc-------------e--E--CCEeeeCCHHHHhhcCCCCEEE
Confidence 34788899 99999999987 456776 44556532100 0 0 11223578999988 899999
Q ss_pred EccCCChhhhhcccHHHHhcCCCCcEEEEcCCC-cccCHHHHHHHHHcCCc
Q 016620 242 LHPVLDKTTYHLINKERLATMKKEAILVNCSRG-PVIDEVALVEHLKQNPM 291 (386)
Q Consensus 242 l~lPlt~~t~~li~~~~~~~mk~gailIN~aRg-~~vde~aL~~aL~~g~i 291 (386)
+++|. +.+...+ ++..+ .... .+|..+.| ..-+++.|.++.++..+
T Consensus 76 i~vp~-~~~~~~v-~ea~~-~Gi~-~vVi~t~G~~~~~~~~l~~~A~~~gi 122 (294)
T 2yv1_A 76 IFVPA-PFAKDAV-FEAID-AGIE-LIVVITEHIPVHDTMEFVNYAEDVGV 122 (294)
T ss_dssp ECCCH-HHHHHHH-HHHHH-TTCS-EEEECCSCCCHHHHHHHHHHHHHHTC
T ss_pred EccCH-HHHHHHH-HHHHH-CCCC-EEEEECCCCCHHHHHHHHHHHHHcCC
Confidence 99994 2233332 33333 2222 24444444 23456788888887544
No 463
>3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT}
Probab=93.59 E-value=0.043 Score=50.63 Aligned_cols=36 Identities=14% Similarity=0.137 Sum_probs=31.1
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.+++|.|.|.|-||+.+++.| ..-|.+|++.+|+..
T Consensus 2 ~~~~ilVtGaG~iG~~l~~~L-~~~g~~V~~~~r~~~ 37 (286)
T 3gpi_A 2 SLSKILIAGCGDLGLELARRL-TAQGHEVTGLRRSAQ 37 (286)
T ss_dssp CCCCEEEECCSHHHHHHHHHH-HHTTCCEEEEECTTS
T ss_pred CCCcEEEECCCHHHHHHHHHH-HHCCCEEEEEeCCcc
Confidence 357899999999999999998 467999999998754
No 464
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=93.51 E-value=0.34 Score=48.72 Aligned_cols=34 Identities=18% Similarity=0.352 Sum_probs=27.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcCCc---EEEEEcCCh
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGFKM---NLIYYDLYQ 199 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~fg~---~V~~~d~~~ 199 (386)
++|.|||+|.||+.+|+.|++..++ +|+..|+..
T Consensus 14 ~rVlIIGaGgVG~~va~lla~~~dv~~~~I~vaD~~~ 50 (480)
T 2ph5_A 14 NRFVILGFGCVGQALMPLIFEKFDIKPSQVTIIAAEG 50 (480)
T ss_dssp SCEEEECCSHHHHHHHHHHHHHBCCCGGGEEEEESSC
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCceeEEEEeccch
Confidence 4599999999999999988776665 677777643
No 465
>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*
Probab=93.50 E-value=0.1 Score=46.58 Aligned_cols=73 Identities=18% Similarity=0.139 Sum_probs=48.0
Q ss_pred cCCCeEEEEe-cChhHHHHHHHHHhcC--CcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCc--cccccCCHHHHhhhC
Q 016620 163 LKGQTVGVIG-AGRIGSAYARMMVEGF--KMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (386)
Q Consensus 163 l~g~~vgIvG-~G~IG~~iA~~L~~~f--g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~a 237 (386)
..+++|.|.| .|.||+.+++.|+ .. |.+|++.+|+.... +. + ....... ......+++++++.+
T Consensus 2 ~~~~~ilVtGasG~iG~~l~~~l~-~~~~g~~V~~~~r~~~~~-~~--------~-~~~~~~~~~D~~d~~~~~~~~~~~ 70 (253)
T 1xq6_A 2 ANLPTVLVTGASGRTGQIVYKKLK-EGSDKFVAKGLVRSAQGK-EK--------I-GGEADVFIGDITDADSINPAFQGI 70 (253)
T ss_dssp CSCCEEEEESTTSHHHHHHHHHHH-HTTTTCEEEEEESCHHHH-HH--------T-TCCTTEEECCTTSHHHHHHHHTTC
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHH-hcCCCcEEEEEEcCCCch-hh--------c-CCCeeEEEecCCCHHHHHHHHcCC
Confidence 3578999998 5999999999985 45 89999999876432 11 0 0000000 011123566788899
Q ss_pred CEEEEccCC
Q 016620 238 DVISLHPVL 246 (386)
Q Consensus 238 DiVvl~lPl 246 (386)
|+|+.+...
T Consensus 71 d~vi~~a~~ 79 (253)
T 1xq6_A 71 DALVILTSA 79 (253)
T ss_dssp SEEEECCCC
T ss_pred CEEEEeccc
Confidence 999988754
No 466
>2ep5_A 350AA long hypothetical aspartate-semialdehyde dehydrogenase; oxidoreductase, structural genomics, NPPSFA; 2.40A {Sulfolobus tokodaii}
Probab=93.48 E-value=0.11 Score=50.40 Aligned_cols=99 Identities=15% Similarity=0.233 Sum_probs=50.4
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEc-CChhhHHHHHHhhhhhhhhh----cCCCCccccccCCHHHHhhhCCE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYD-LYQATRLEKFVTAYGQFLKA----NGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.+|||+| .|.||+.+.+.|...-.+++.+.. .+... -..+.+.|+ .+.. .+.....+.. .+.++ +..+|+
T Consensus 5 ~kV~IiGAtG~iG~~llr~L~~~p~~elvai~~s~~~~-g~~~~~~~~-~~~~~~~~~~~~~~~~~~-~d~~~-~~~vDv 80 (350)
T 2ep5_A 5 IKVSLLGSTGMVGQKMVKMLAKHPYLELVKVSASPSKI-GKKYKDAVK-WIEQGDIPEEVQDLPIVS-TNYED-HKDVDV 80 (350)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECCGGGT-TSBHHHHCC-CCSSSSCCHHHHTCBEEC-SSGGG-GTTCSE
T ss_pred cEEEEECcCCHHHHHHHHHHHhCCCcEEEEEecChhhc-CCCHHHhcC-cccccccccCCceeEEee-CCHHH-hcCCCE
Confidence 5799999 899999999987432356777663 22111 001111110 0000 0000011111 13334 478999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
|+.|+|... +..+ -... ++.|+.+|+.+.
T Consensus 81 Vf~atp~~~-s~~~-a~~~---~~aG~~VId~s~ 109 (350)
T 2ep5_A 81 VLSALPNEL-AESI-ELEL---VKNGKIVVSNAS 109 (350)
T ss_dssp EEECCCHHH-HHHH-HHHH---HHTTCEEEECSS
T ss_pred EEECCChHH-HHHH-HHHH---HHCCCEEEECCc
Confidence 999999422 2222 1222 355777888764
No 467
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=93.39 E-value=0.11 Score=49.77 Aligned_cols=94 Identities=19% Similarity=0.195 Sum_probs=58.2
Q ss_pred CC--CeEEEEec-ChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhh-cCCCCccccccCCHHHHhh---
Q 016620 164 KG--QTVGVIGA-GRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKA-NGEQPVTWKRASSMDEVLR--- 235 (386)
Q Consensus 164 ~g--~~vgIvG~-G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~ell~--- 235 (386)
.| ++|.|.|. |.||..+++.+ +..|+ +|++.+++...... +.+ .+..........++.+.+.
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a-~~~Ga~~Vi~~~~~~~~~~~---------~~~~~g~~~~~d~~~~~~~~~~~~~~ 227 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIG-HFLGCSRVVGICGTHEKCIL---------LTSELGFDAAINYKKDNVAEQLRESC 227 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHH-HHTTCSEEEEEESCHHHHHH---------HHHTSCCSEEEETTTSCHHHHHHHHC
T ss_pred CCCccEEEEECCCcHHHHHHHHHH-HHCCCCeEEEEeCCHHHHHH---------HHHHcCCceEEecCchHHHHHHHHhc
Confidence 46 89999998 99999999986 78999 99999987543211 111 1211110111123333332
Q ss_pred --hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 --EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 --~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+.+... . .-...++.++++..++.++.
T Consensus 228 ~~~~d~vi~~~G~--~----~~~~~~~~l~~~G~iv~~G~ 261 (357)
T 2zb4_A 228 PAGVDVYFDNVGG--N----ISDTVISQMNENSHIILCGQ 261 (357)
T ss_dssp TTCEEEEEESCCH--H----HHHHHHHTEEEEEEEEECCC
T ss_pred CCCCCEEEECCCH--H----HHHHHHHHhccCcEEEEECC
Confidence 36888877752 1 12456777888888887764
No 468
>2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A*
Probab=93.38 E-value=0.082 Score=49.68 Aligned_cols=36 Identities=17% Similarity=0.243 Sum_probs=30.9
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.|++|.|.|. |.||+.+++.|+ ..|.+|++.+|+..
T Consensus 2 ~~~~vlVtGatG~iG~~l~~~L~-~~G~~V~~~~r~~~ 38 (345)
T 2z1m_A 2 SGKRALITGIRGQDGAYLAKLLL-EKGYEVYGADRRSG 38 (345)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHH-HTTCEEEEECSCCS
T ss_pred CCCEEEEECCCChHHHHHHHHHH-HCCCEEEEEECCCc
Confidence 5789999997 999999999984 67999999998754
No 469
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=93.36 E-value=0.11 Score=48.15 Aligned_cols=38 Identities=24% Similarity=0.236 Sum_probs=33.2
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChh
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQA 200 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~ 200 (386)
.+.|+++.|.|. |.||+++|+.|+ ..|++|+..+|+..
T Consensus 6 ~l~~k~vlVTGas~GIG~aia~~l~-~~G~~V~~~~r~~~ 44 (285)
T 3sc4_A 6 SLRGKTMFISGGSRGIGLAIAKRVA-ADGANVALVAKSAE 44 (285)
T ss_dssp CCTTCEEEEESCSSHHHHHHHHHHH-TTTCEEEEEESCCS
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEECChh
Confidence 588999999986 889999999985 67999999998764
No 470
>1js1_X Transcarbamylase; alpha/beta topology, two domains, transferase; 2.00A {Bacteroides fragilis} SCOP: c.78.1.1 c.78.1.1 PDB: 2fg6_X* 2fg7_X* 2g7m_X*
Probab=93.35 E-value=3.2 Score=39.53 Aligned_cols=102 Identities=10% Similarity=-0.056 Sum_probs=65.1
Q ss_pred hhCCcEEecCCCCCchhHHHHHHHHHHHHHhchHHHHHHHHcCccCCCCCCcccccccCCCeEEE-----EecChhHHHH
Q 016620 106 NKYGIAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTVGV-----IGAGRIGSAY 180 (386)
Q Consensus 106 ~~~gI~v~n~~~~~~~~vAE~al~~~L~~~R~~~~~~~~~~~~~~~~w~~~~~~g~~l~g~~vgI-----vG~G~IG~~i 180 (386)
+-.+|+|.|.-+....++ .+++=++.+.+++ | + ..+. .+|++ +|=+++..+.
T Consensus 132 ~~~~vPVINa~~~~~HPt--QaLaDl~Ti~e~~---------g----~-------~~l~-l~ia~a~~~~vGD~rva~Sl 188 (324)
T 1js1_X 132 QHSGRPVFSMEAATRHPL--QSFADLITIEEYK---------K----T-------ARPK-VVMTWAPHPRPLPQAVPNSF 188 (324)
T ss_dssp HHSSSCEEESSCSSCCHH--HHHHHHHHHHHHC---------S----S-------SSCE-EEEECCCCSSCCCSHHHHHH
T ss_pred hhCCCCEEECCCCCCCcH--HHHHHHHHHHHHc---------C----C-------CCee-EEEEEEcccccCCcchHHHH
Confidence 455799999766433322 2333334433311 1 0 1366 88999 9999999999
Q ss_pred HHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEccC
Q 016620 181 ARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHPV 245 (386)
Q Consensus 181 A~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~lP 245 (386)
+..+ ..||++|.+..|..-...+.. . ..+....+++|+++++|+|..-.-
T Consensus 189 ~~~~-~~~G~~v~~~~P~~~~~~~~~--------~------~~~~~~~d~~eav~~aDvvy~~~w 238 (324)
T 1js1_X 189 AEWM-NATDYEFVITHPEGYELDPKF--------V------GNARVEYDQMKAFEGADFIYAKNW 238 (324)
T ss_dssp HHHH-HTSSSEEEEECCTTCCCCHHH--------H------TTCEEESCHHHHHTTCSEEEECCC
T ss_pred HHHH-HHCCCEEEEeCCcccCCChhh--------c------cceEEECCHHHHhCCCCEEEecCc
Confidence 9987 579999999987532111100 0 012335789999999999988443
No 471
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=93.34 E-value=0.11 Score=50.82 Aligned_cols=99 Identities=15% Similarity=0.041 Sum_probs=61.3
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCH-HHHhh------
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSM-DEVLR------ 235 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-~ell~------ 235 (386)
.|.+|.|+|.|.||...++.+ +.+|+ +|++.+++..... + +++.+.. .......++ .+.+.
T Consensus 185 ~g~~VlV~GaG~vG~~aiqla-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~-~i~~~~~~~~~~~~~~~~~g~ 253 (398)
T 2dph_A 185 PGSHVYIAGAGPVGRCAAAGA-RLLGAACVIVGDQNPERLK--L-------LSDAGFE-TIDLRNSAPLRDQIDQILGKP 253 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHHTCSEEEEEESCHHHHH--H-------HHTTTCE-EEETTSSSCHHHHHHHHHSSS
T ss_pred CCCEEEEECCCHHHHHHHHHH-HHcCCCEEEEEcCCHHHHH--H-------HHHcCCc-EEcCCCcchHHHHHHHHhCCC
Confidence 688999999999999999975 78999 9999998765421 1 1222321 111111222 22221
Q ss_pred hCCEEEEccCCChh----------hhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 236 EADVISLHPVLDKT----------TYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 236 ~aDiVvl~lPlt~~----------t~~li~~~~~~~mk~gailIN~aRg 274 (386)
..|+|+-+...... .... -.+.++.++++..++.++-.
T Consensus 254 g~Dvvid~~g~~~~~~~~~~~~~~~~~~-~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 254 EVDCGVDAVGFEAHGLGDEANTETPNGA-LNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp CEEEEEECSCTTCBCSGGGTTSBCTTHH-HHHHHHHEEEEEEEECCSCC
T ss_pred CCCEEEECCCCccccccccccccccHHH-HHHHHHHHhcCCEEEEeccc
Confidence 47999988874310 0001 24567778888888877643
No 472
>1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A
Probab=93.33 E-value=0.3 Score=46.05 Aligned_cols=101 Identities=17% Similarity=0.235 Sum_probs=55.7
Q ss_pred CeEEEEe-cChhHHHHHHHHHh-cCCcEEEEEcC--ChhhHHHH-HHhhhhhhhhhcC-CCCccccccCCHHHHhhhCCE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVE-GFKMNLIYYDL--YQATRLEK-FVTAYGQFLKANG-EQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~-~fg~~V~~~d~--~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~l~ell~~aDi 239 (386)
++|+|+| .|.+|..++..|+. +...++..+|+ .... .+. ..+. .+... ..+..... .+ .+.++.||+
T Consensus 1 mKI~IiGAaG~vG~~l~~~L~~~~~~~el~L~Di~~~~~~-~~~~~~dl----~~~~~~~~~~~v~~-~~-~~a~~~aDv 73 (303)
T 1o6z_A 1 TKVSVVGAAGTVGAAAGYNIALRDIADEVVFVDIPDKEDD-TVGQAADT----NHGIAYDSNTRVRQ-GG-YEDTAGSDV 73 (303)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCCSEEEEECCGGGHHH-HHHHHHHH----HHHHTTTCCCEEEE-CC-GGGGTTCSE
T ss_pred CEEEEECCCChHHHHHHHHHHhCCCCCEEEEEcCCCChhh-HHHHHHHH----HHHHhhCCCcEEEe-CC-HHHhCCCCE
Confidence 4799999 99999999988743 23337888998 5432 111 1111 01100 11111111 23 667899999
Q ss_pred EEEccCCChh---hh-hc------ccH---HHHhcCCCCcEEEEcCC
Q 016620 240 ISLHPVLDKT---TY-HL------INK---ERLATMKKEAILVNCSR 273 (386)
Q Consensus 240 Vvl~lPlt~~---t~-~l------i~~---~~~~~mk~gailIN~aR 273 (386)
|+++...... ++ .+ +-. +.+....+.+++++++-
T Consensus 74 Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~p~~~viv~SN 120 (303)
T 1o6z_A 74 VVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDEHNDDYISLTTSN 120 (303)
T ss_dssp EEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHTTCSCCEEEECCS
T ss_pred EEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCcEEEEeCC
Confidence 9999764321 11 00 111 22333467889998744
No 473
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=93.32 E-value=0.1 Score=50.12 Aligned_cols=37 Identities=14% Similarity=0.015 Sum_probs=32.4
Q ss_pred CCCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 164 KGQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 164 ~g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
.|++|.|+| .|.||..+++.+ +..|++|++.+++...
T Consensus 162 ~g~~vlV~Ga~ggiG~~~~~~a-~~~Ga~Vi~~~~~~~~ 199 (354)
T 2j8z_A 162 AGDYVLIHAGLSGVGTAAIQLT-RMAGAIPLVTAGSQKK 199 (354)
T ss_dssp TTCEEEESSTTSHHHHHHHHHH-HHTTCEEEEEESCHHH
T ss_pred CCCEEEEECCccHHHHHHHHHH-HHcCCEEEEEeCCHHH
Confidence 588999999 799999999986 7899999999987643
No 474
>3dr3_A N-acetyl-gamma-glutamyl-phosphate reductase; csgid target, ARGC, essential gene, amino-acid biosynthesis, arginine biosynthesis, cytoplasm; HET: MLT; 2.00A {Shigella flexneri} PDB: 2g17_A
Probab=93.32 E-value=0.12 Score=49.85 Aligned_cols=98 Identities=16% Similarity=0.204 Sum_probs=54.1
Q ss_pred CeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCCh---h--hHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 166 QTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQ---A--TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 166 ~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
.+|+|+| .|.+|+.+.++|..--..++.....+. . .... +.|+. ++ +.....+....+.+++++++|+
T Consensus 5 ~kv~IvGatG~vG~~l~~~L~~~p~~el~~l~s~~~~~saGk~~~---~~~p~-~~--~~~~~~v~~~~~~~~~~~~~Dv 78 (337)
T 3dr3_A 5 LNTLIVGASGYAGAELVTYVNRHPHMNITALTVSAQSNDAGKLIS---DLHPQ-LK--GIVELPLQPMSDISEFSPGVDV 78 (337)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTSBHH---HHCGG-GT--TTCCCBEEEESSGGGTCTTCSE
T ss_pred eEEEEECCCChHHHHHHHHHHhCCCCcEEEEEecCchhhcCCchH---HhCcc-cc--CccceeEeccCCHHHHhcCCCE
Confidence 4799999 599999999988533456776654332 1 1111 11110 11 1101111111034555589999
Q ss_pred EEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCC
Q 016620 240 ISLHPVLDKTTYHLINKERLATMKKEAILVNCSRG 274 (386)
Q Consensus 240 Vvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg 274 (386)
|+.|+|... +..+. ... .+.|+.+|+.|.-
T Consensus 79 vf~a~p~~~-s~~~~-~~~---~~~g~~vIDlSa~ 108 (337)
T 3dr3_A 79 VFLATAHEV-SHDLA-PQF---LEAGCVVFDLSGA 108 (337)
T ss_dssp EEECSCHHH-HHHHH-HHH---HHTTCEEEECSST
T ss_pred EEECCChHH-HHHHH-HHH---HHCCCEEEEcCCc
Confidence 999999422 22221 222 4679999998764
No 475
>2ejw_A HDH, homoserine dehydrogenase; NAD-dependent, oxidoreductase; 1.70A {Thermus thermophilus}
Probab=93.27 E-value=0.073 Score=51.23 Aligned_cols=102 Identities=13% Similarity=0.136 Sum_probs=58.2
Q ss_pred CeEEEEecChhHHHHHHHHHhcC---------CcEEE-EEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh
Q 016620 166 QTVGVIGAGRIGSAYARMMVEGF---------KMNLI-YYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR 235 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~f---------g~~V~-~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~ 235 (386)
.+|||+|+|.||+.+++.+. .. +.+|. ++|++.... .+. +. .....++++++
T Consensus 4 irvgIiG~G~VG~~~~~~l~-~~~~~l~~~g~~~~lvaV~d~~~~~~--------------~~~-~~-~~~~~d~~~ll- 65 (332)
T 2ejw_A 4 LKIALLGGGTVGSAFYNLVL-ERAEELSAFGVVPRFLGVLVRDPRKP--------------RAI-PQ-ELLRAEPFDLL- 65 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHH-HTGGGGGGGTEEEEEEEEECSCTTSC--------------CSS-CG-GGEESSCCCCT-
T ss_pred eEEEEEcCCHHHHHHHHHHH-hChhhHhhcCCCEEEEEEEECCHHHh--------------hcc-Cc-ccccCCHHHHh-
Confidence 36999999999999999874 33 45654 556653220 011 11 11245777888
Q ss_pred hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcC
Q 016620 236 EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQN 289 (386)
Q Consensus 236 ~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~~aL~~g 289 (386)
+.|+|+.|+|........+ . ..++.|.-+|...-..+ -.-+.|.++.++.
T Consensus 66 ~iDvVve~t~~~~~a~~~~-~---~AL~aGKhVVtaNkkpla~~~~eL~~~A~~~ 116 (332)
T 2ejw_A 66 EADLVVEAMGGVEAPLRLV-L---PALEAGIPLITANKALLAEAWESLRPFAEEG 116 (332)
T ss_dssp TCSEEEECCCCSHHHHHHH-H---HHHHTTCCEEECCHHHHHHSHHHHHHHHHTT
T ss_pred CCCEEEECCCCcHHHHHHH-H---HHHHcCCeEEECCchhHHHHHHHHHHHHHhC
Confidence 8999999998642211111 2 23444544444222112 3456777777665
No 476
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=93.23 E-value=0.11 Score=48.32 Aligned_cols=38 Identities=21% Similarity=0.176 Sum_probs=31.1
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCCh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~ 199 (386)
..+.|+++.|.|. |.||+++|+.|+ ..|++|++.+|+.
T Consensus 19 ~~l~~k~~lVTGas~gIG~aia~~L~-~~G~~V~~~~r~~ 57 (288)
T 2x9g_A 19 SHMEAPAAVVTGAAKRIGRAIAVKLH-QTGYRVVIHYHNS 57 (288)
T ss_dssp ---CCCEEEETTCSSHHHHHHHHHHH-HHTCEEEEEESSC
T ss_pred cCCCCCEEEEeCCCCHHHHHHHHHHH-HCCCeEEEEeCCc
Confidence 4688999999975 899999999985 6799999999876
No 477
>3r3j_A Glutamate dehydrogenase; rossman fold, oxidoreductase, apicoplast; 3.10A {Plasmodium falciparum}
Probab=93.16 E-value=0.57 Score=46.78 Aligned_cols=120 Identities=15% Similarity=0.092 Sum_probs=66.3
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCcEEE-EEcCC-------hh--hHHHHHHh---hhhhhhhhc--CCCCcccc
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLI-YYDLY-------QA--TRLEKFVT---AYGQFLKAN--GEQPVTWK 225 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~-~~d~~-------~~--~~~~~~~~---~~~~~~~~~--~~~~~~~~ 225 (386)
.++.|+||.|-|+|++|+..|+.| ...|++|+ +.|.+ .- ..+....+ .....+... ......
T Consensus 235 ~~l~g~~VaVQG~GnVG~~aa~~L-~e~GakvVavsD~~G~iyd~~Gld~~~l~~~~~~k~~~~~~v~~~~~~~~~a~-- 311 (456)
T 3r3j_A 235 DNLENKKCLVSGSGNVAQYLVEKL-IEKGAIVLTMSDSNGYILEPNGFTKEQLNYIMDIKNNQRLRLKEYLKYSKTAK-- 311 (456)
T ss_dssp CCSTTCCEEEECCSHHHHHHHHHH-HHHTCCBCCEECSSCEEECTTCCCHHHHHHHHHHHHTSCCCGGGGGGTCSSCE--
T ss_pred CCccCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEECCCCcEECCCCCCHHHHHHHHHHHHhcCcchhhhhhcCCCce--
Confidence 469999999999999999999987 57899986 45532 10 11111000 000000000 000111
Q ss_pred ccCCHHHH-hhhCCEEEEccCCChhhhhcccHHHHhcCC--CCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016620 226 RASSMDEV-LREADVISLHPVLDKTTYHLINKERLATMK--KEAILVNCSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 226 ~~~~l~el-l~~aDiVvl~lPlt~~t~~li~~~~~~~mk--~gailIN~aRg~~vde~aL~~aL~~g~i 291 (386)
.. +-+++ -..|||.+=|.- .+.|+.+...++. +-.+++-.+-+++-.+. .+.|.+..|
T Consensus 312 ~v-~~~~i~~~~~DI~iPcA~-----~~~I~~~na~~l~~~~ak~V~EgAN~p~T~eA--~~iL~~rGI 372 (456)
T 3r3j_A 312 YF-ENQKPWNIPCDIAFPCAT-----QNEINENDADLFIQNKCKMIVEGANMPTHIKA--LHKLKQNNI 372 (456)
T ss_dssp EE-CSCCGGGSCCSEEEECSC-----TTCBCHHHHHHHHHHTCCEEECCSSSCBCTTH--HHHHHTTTC
T ss_pred Ee-CCccccccCccEEEeCCC-----ccchhhHHHHHHHhcCCeEEEecCCCCCCHHH--HHHHHHCCC
Confidence 11 11222 246898887753 5667777666662 23477888888864433 256665443
No 478
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=93.12 E-value=0.19 Score=48.27 Aligned_cols=37 Identities=22% Similarity=0.344 Sum_probs=32.6
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
.|++|.|.|. |.||..+++.+ +..|++|++.+++...
T Consensus 170 ~g~~vlV~GasggiG~~~~~~a-~~~Ga~Vi~~~~~~~~ 207 (351)
T 1yb5_A 170 AGESVLVHGASGGVGLAACQIA-RAYGLKILGTAGTEEG 207 (351)
T ss_dssp TTCEEEEETCSSHHHHHHHHHH-HHTTCEEEEEESSHHH
T ss_pred CcCEEEEECCCChHHHHHHHHH-HHCCCEEEEEeCChhH
Confidence 5889999998 99999999986 7899999999987643
No 479
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=93.12 E-value=0.044 Score=50.65 Aligned_cols=38 Identities=18% Similarity=0.132 Sum_probs=28.5
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCCh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~ 199 (386)
..+.||++.|.|. |.||+++|+.|+ .-|++|+..+++.
T Consensus 23 m~~~~k~~lVTGas~GIG~aia~~la-~~G~~Vv~~~~~~ 61 (267)
T 3u5t_A 23 MMETNKVAIVTGASRGIGAAIAARLA-SDGFTVVINYAGK 61 (267)
T ss_dssp ----CCEEEEESCSSHHHHHHHHHHH-HHTCEEEEEESSC
T ss_pred cccCCCEEEEeCCCCHHHHHHHHHHH-HCCCEEEEEcCCC
Confidence 3578999999987 899999999985 6799998875443
No 480
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=93.10 E-value=0.15 Score=49.73 Aligned_cols=100 Identities=20% Similarity=0.121 Sum_probs=59.9
Q ss_pred CCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh------h
Q 016620 164 KGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR------E 236 (386)
Q Consensus 164 ~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~------~ 236 (386)
.|.+|.|+|.|.+|...++.+ +.+|+ +|++.+++..... + .++.+..........++.+.+. .
T Consensus 185 ~g~~VlV~GaG~vG~~aiqlA-k~~Ga~~Vi~~~~~~~~~~--~-------a~~lGa~~i~~~~~~~~~~~v~~~t~g~g 254 (398)
T 1kol_A 185 PGSTVYVAGAGPVGLAAAASA-RLLGAAVVIVGDLNPARLA--H-------AKAQGFEIADLSLDTPLHEQIAALLGEPE 254 (398)
T ss_dssp TTCEEEEECCSHHHHHHHHHH-HHTTCSEEEEEESCHHHHH--H-------HHHTTCEEEETTSSSCHHHHHHHHHSSSC
T ss_pred CCCEEEEECCcHHHHHHHHHH-HHCCCCeEEEEcCCHHHHH--H-------HHHcCCcEEccCCcchHHHHHHHHhCCCC
Confidence 678999999999999999974 78999 7999988764421 1 1222321111111112333221 4
Q ss_pred CCEEEEccCCChhh-----hh-----cccHHHHhcCCCCcEEEEcCC
Q 016620 237 ADVISLHPVLDKTT-----YH-----LINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 237 aDiVvl~lPlt~~t-----~~-----li~~~~~~~mk~gailIN~aR 273 (386)
.|+|+-++...... .+ -.-.+.++.++++..++.++-
T Consensus 255 ~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 255 VDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp EEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 79998888642100 00 012456777888888887764
No 481
>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}
Probab=93.09 E-value=0.23 Score=45.95 Aligned_cols=76 Identities=11% Similarity=0.115 Sum_probs=46.5
Q ss_pred CCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCCh-h-----hHHHHHHhhhhhhhhhcCCCCc--cccccCCHHHHhh
Q 016620 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ-A-----TRLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLR 235 (386)
Q Consensus 165 g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~-~-----~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~ 235 (386)
+++|.|.|. |.||+.+++.|+ .-|.+|++.+|+. . ..... ... +...+..-. ......++.++++
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~~~~~~-~~~----l~~~~v~~v~~D~~d~~~l~~~~~ 75 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASI-KAGNPTYALVRKTITAANPETKEEL-IDN----YQSLGVILLEGDINDHETLVKAIK 75 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HHTCCEEEEECCSCCSSCHHHHHHH-HHH----HHHTTCEEEECCTTCHHHHHHHHT
T ss_pred CcEEEEECCCchHHHHHHHHHH-hCCCcEEEEECCCcccCChHHHHHH-HHH----HHhCCCEEEEeCCCCHHHHHHHHh
Confidence 578999996 999999999884 5688999998875 1 11110 000 111111100 0111235667788
Q ss_pred hCCEEEEccCC
Q 016620 236 EADVISLHPVL 246 (386)
Q Consensus 236 ~aDiVvl~lPl 246 (386)
.+|+|+.+.+.
T Consensus 76 ~~d~vi~~a~~ 86 (307)
T 2gas_A 76 QVDIVICAAGR 86 (307)
T ss_dssp TCSEEEECSSS
T ss_pred CCCEEEECCcc
Confidence 89999888764
No 482
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=93.06 E-value=0.2 Score=46.32 Aligned_cols=77 Identities=19% Similarity=0.241 Sum_probs=46.8
Q ss_pred CCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh----HHHHHHhhhhhhhhhcCCCCc--cccccCCHHHHhhhC
Q 016620 165 GQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT----RLEKFVTAYGQFLKANGEQPV--TWKRASSMDEVLREA 237 (386)
Q Consensus 165 g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~----~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~ell~~a 237 (386)
.++|.|.|. |.||+.+++.|+ ..|.+|++.+|+... ...+.... +...+.... ......++.++++.+
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~l~R~~~~~~~~~~~~~~~~----l~~~~v~~v~~D~~d~~~l~~~~~~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASL-DLGHPTFLLVRESTASSNSEKAQLLES----FKASGANIVHGSIDDHASLVEAVKNV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHH-HTTCCEEEECCCCCTTTTHHHHHHHHH----HHTTTCEEECCCTTCHHHHHHHHHTC
T ss_pred CCEEEEEcCCcHHHHHHHHHHH-hCCCCEEEEECCcccccCHHHHHHHHH----HHhCCCEEEEeccCCHHHHHHHHcCC
Confidence 468999996 999999999984 678999999887421 11110000 111111000 011123566778899
Q ss_pred CEEEEccCC
Q 016620 238 DVISLHPVL 246 (386)
Q Consensus 238 DiVvl~lPl 246 (386)
|+|+.+.+.
T Consensus 79 d~vi~~a~~ 87 (308)
T 1qyc_A 79 DVVISTVGS 87 (308)
T ss_dssp SEEEECCCG
T ss_pred CEEEECCcc
Confidence 999888763
No 483
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=93.06 E-value=0.077 Score=48.73 Aligned_cols=38 Identities=18% Similarity=0.211 Sum_probs=32.3
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCCh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQ 199 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~ 199 (386)
.++.||++.|.|. |.||+++|+.|+ ..|++|+..++..
T Consensus 7 ~~l~~k~vlVTGas~GIG~aia~~la-~~G~~V~~~~r~~ 45 (262)
T 3ksu_A 7 HDLKNKVIVIAGGIKNLGALTAKTFA-LESVNLVLHYHQA 45 (262)
T ss_dssp SCCTTCEEEEETCSSHHHHHHHHHHT-TSSCEEEEEESCG
T ss_pred cCCCCCEEEEECCCchHHHHHHHHHH-HCCCEEEEEecCc
Confidence 3589999999986 889999999984 7899999987653
No 484
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=93.04 E-value=0.14 Score=46.92 Aligned_cols=39 Identities=28% Similarity=0.289 Sum_probs=33.3
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
.+.|+++.|.|. |.||+++|+.|+ ..|++|+..+|+...
T Consensus 3 ~l~~k~vlITGas~gIG~aia~~l~-~~G~~V~~~~r~~~~ 42 (263)
T 2a4k_A 3 RLSGKTILVTGAASGIGRAALDLFA-REGASLVAVDREERL 42 (263)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHH-HTTCEEEEEESCHHH
T ss_pred CCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCHHH
Confidence 378899999986 899999999985 679999999987643
No 485
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=93.04 E-value=0.085 Score=48.68 Aligned_cols=40 Identities=23% Similarity=0.084 Sum_probs=33.5
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
..+.||++.|.|. |.||+++|+.|+ ..|++|++.+++...
T Consensus 24 ~~l~~k~vlVTGas~gIG~aia~~la-~~G~~V~~~~~~~~~ 64 (269)
T 4dmm_A 24 LPLTDRIALVTGASRGIGRAIALELA-AAGAKVAVNYASSAG 64 (269)
T ss_dssp CTTTTCEEEETTCSSHHHHHHHHHHH-HTTCEEEEEESSCHH
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHH-HCCCEEEEEeCCChH
Confidence 4689999999986 789999999985 689999988875443
No 486
>2yfk_A Aspartate/ornithine carbamoyltransferase; transcarbamylase; 2.55A {Enterococcus faecalis}
Probab=93.03 E-value=0.33 Score=48.07 Aligned_cols=78 Identities=18% Similarity=0.264 Sum_probs=50.4
Q ss_pred cCCCeEEEEe-----cCh---hHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHh
Q 016620 163 LKGQTVGVIG-----AGR---IGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVL 234 (386)
Q Consensus 163 l~g~~vgIvG-----~G~---IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell 234 (386)
+.|.+|+|+| +|. +..+++..+ ..||++|.+..|..-.-.+.+.+...+..+..| ..+....+++|++
T Consensus 186 l~Glkva~vgd~~~s~Gd~nnVa~Sli~~l-~~lG~~v~l~~P~~~~~~p~~~~~a~~~a~~~G---~~v~~~~d~~eav 261 (418)
T 2yfk_A 186 LKGKKVAMTWAYSPSYGKPLSVPQGIVGLM-TRLGMDVVLAHPEGYEIMPEVEEVAKKNAAEFG---GNFTKTNSMAEAF 261 (418)
T ss_dssp GTTCEEEEECCCCSSSCCCSHHHHHHHHHH-GGGTCEEEEECCTTCCCCHHHHHHHHHHHHHHS---SEEEEESCHHHHH
T ss_pred cCCCEEEEEeccccccCccchHHHHHHHHH-HHcCCEEEEECCccccCCHHHHHHHHHHHHHcC---CEEEEEcCHHHHh
Confidence 8899999998 454 889999987 579999999988632101111110000011112 1233457899999
Q ss_pred hhCCEEEEcc
Q 016620 235 READVISLHP 244 (386)
Q Consensus 235 ~~aDiVvl~l 244 (386)
+++|+|..-+
T Consensus 262 ~~ADVVytd~ 271 (418)
T 2yfk_A 262 KDADVVYPKS 271 (418)
T ss_dssp TTCSEEEECC
T ss_pred cCCCEEEEcc
Confidence 9999999864
No 487
>2g82_O GAPDH, glyceraldehyde-3-phosphate dehydrogenase; G3PDH, glycolysis, oxidoreductase, NAD, rossmann fold; HET: NAD PGE; 1.65A {Thermus aquaticus} SCOP: c.2.1.3 d.81.1.1 PDB: 1cer_O* 1vc2_A*
Probab=93.02 E-value=0.083 Score=50.85 Aligned_cols=30 Identities=27% Similarity=0.444 Sum_probs=24.6
Q ss_pred eEEEEecChhHHHHHHHHHhcCCcEEEEEcC
Q 016620 167 TVGVIGAGRIGSAYARMMVEGFKMNLIYYDL 197 (386)
Q Consensus 167 ~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~ 197 (386)
+|||+|+|.||+.+.+.|... .++|.+.+.
T Consensus 2 kVgInG~G~IGr~vlr~l~~~-~~evvaind 31 (331)
T 2g82_O 2 KVGINGFGRIGRQVFRILHSR-GVEVALIND 31 (331)
T ss_dssp EEEEECCSHHHHHHHHHHHHH-TCCEEEEEC
T ss_pred EEEEECcCHHHHHHHHHHHhC-CCEEEEEec
Confidence 799999999999999987444 788876543
No 488
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=93.00 E-value=0.12 Score=47.41 Aligned_cols=70 Identities=14% Similarity=0.146 Sum_probs=46.3
Q ss_pred CCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEcc
Q 016620 165 GQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLHP 244 (386)
Q Consensus 165 g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~l 244 (386)
.++|.|.|.|.||+.+++.| ..-|.+|++.+|+...... +...+.... .....+++ +..+|+|+.+.
T Consensus 5 ~~~ilVtGaG~iG~~l~~~L-~~~g~~V~~~~r~~~~~~~---------~~~~~~~~~-~~D~~d~~--~~~~d~vi~~a 71 (286)
T 3ius_A 5 TGTLLSFGHGYTARVLSRAL-APQGWRIIGTSRNPDQMEA---------IRASGAEPL-LWPGEEPS--LDGVTHLLIST 71 (286)
T ss_dssp CCEEEEETCCHHHHHHHHHH-GGGTCEEEEEESCGGGHHH---------HHHTTEEEE-ESSSSCCC--CTTCCEEEECC
T ss_pred cCcEEEECCcHHHHHHHHHH-HHCCCEEEEEEcChhhhhh---------HhhCCCeEE-Eecccccc--cCCCCEEEECC
Confidence 37899999999999999998 4679999999998654211 001110000 01122344 78899999887
Q ss_pred CCC
Q 016620 245 VLD 247 (386)
Q Consensus 245 Plt 247 (386)
...
T Consensus 72 ~~~ 74 (286)
T 3ius_A 72 APD 74 (286)
T ss_dssp CCB
T ss_pred Ccc
Confidence 654
No 489
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=93.00 E-value=0.087 Score=50.68 Aligned_cols=94 Identities=12% Similarity=0.108 Sum_probs=56.6
Q ss_pred cCCCeEEEEecChhHHHH-HHHHH-hcCCcE-EEEEcCChh---hHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-
Q 016620 163 LKGQTVGVIGAGRIGSAY-ARMMV-EGFKMN-LIYYDLYQA---TRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR- 235 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~i-A~~L~-~~fg~~-V~~~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~- 235 (386)
..+.+|.|+|.|.+|... ++. + +.+|++ |++.+++.. .. ++ +++.+.... .....++.+ +.
T Consensus 171 ~~~~~VlV~GaG~vG~~a~iql-a~k~~Ga~~Vi~~~~~~~~~~~~--~~-------~~~lGa~~v-~~~~~~~~~-i~~ 238 (357)
T 2b5w_A 171 WDPSSAFVLGNGSLGLLTLAML-KVDDKGYENLYCLGRRDRPDPTI--DI-------IEELDATYV-DSRQTPVED-VPD 238 (357)
T ss_dssp CCCCEEEEECCSHHHHHHHHHH-HHCTTCCCEEEEEECCCSSCHHH--HH-------HHHTTCEEE-ETTTSCGGG-HHH
T ss_pred CCCCEEEEECCCHHHHHHHHHH-HHHHcCCcEEEEEeCCcccHHHH--HH-------HHHcCCccc-CCCccCHHH-HHH
Confidence 345899999999999999 886 6 789997 999998764 21 11 112222111 111122322 22
Q ss_pred ---hCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCC
Q 016620 236 ---EADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSR 273 (386)
Q Consensus 236 ---~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aR 273 (386)
..|+|+-+... +.+ -...++.++++..++.++-
T Consensus 239 ~~gg~Dvvid~~g~-~~~----~~~~~~~l~~~G~iv~~g~ 274 (357)
T 2b5w_A 239 VYEQMDFIYEATGF-PKH----AIQSVQALAPNGVGALLGV 274 (357)
T ss_dssp HSCCEEEEEECSCC-HHH----HHHHHHHEEEEEEEEECCC
T ss_pred hCCCCCEEEECCCC-hHH----HHHHHHHHhcCCEEEEEeC
Confidence 36888877753 111 1445666777777777754
No 490
>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*
Probab=92.97 E-value=0.055 Score=52.06 Aligned_cols=104 Identities=16% Similarity=0.155 Sum_probs=59.8
Q ss_pred CCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhc-CCCCc--c-ccccCCHHHHhhhCC
Q 016620 164 KGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKAN-GEQPV--T-WKRASSMDEVLREAD 238 (386)
Q Consensus 164 ~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~-~~~~~--~-~~~~~~l~ell~~aD 238 (386)
.+++|.|.|. |.||+.+++.|+ .-|.+|++.+|+........ +... +.... . .....++.++++.+|
T Consensus 4 ~~~~ilVtGatG~iG~~l~~~L~-~~g~~V~~~~R~~~~~~~~~-------l~~~~~v~~v~~D~l~d~~~l~~~~~~~d 75 (352)
T 1xgk_A 4 QKKTIAVVGATGRQGASLIRVAA-AVGHHVRAQVHSLKGLIAEE-------LQAIPNVTLFQGPLLNNVPLMDTLFEGAH 75 (352)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHH-HTTCCEEEEESCSCSHHHHH-------HHTSTTEEEEESCCTTCHHHHHHHHTTCS
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-hCCCEEEEEECCCChhhHHH-------HhhcCCcEEEECCccCCHHHHHHHHhcCC
Confidence 3678999995 999999999984 57899999988754321110 1100 00000 0 111224667789999
Q ss_pred EEEEccCCChhhhhcccHHHHhcCCC-C--cEEEEcCCCc
Q 016620 239 VISLHPVLDKTTYHLINKERLATMKK-E--AILVNCSRGP 275 (386)
Q Consensus 239 iVvl~lPlt~~t~~li~~~~~~~mk~-g--ailIN~aRg~ 275 (386)
+|+.+...............+..+++ | ..||.+|...
T Consensus 76 ~Vi~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 76 LAFINTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp EEEECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred EEEEcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 99977654311112223444444432 3 3788887753
No 491
>3c8m_A Homoserine dehydrogenase; structural genomics, APC89447, PS protein structure initiative, midwest center for structural genomics; HET: MSE; 1.90A {Thermoplasma volcanium GSS1} PDB: 3jsa_A*
Probab=92.95 E-value=0.13 Score=49.48 Aligned_cols=116 Identities=16% Similarity=0.164 Sum_probs=61.4
Q ss_pred CeEEEEecChhHHHHHHHHHhc-----C--CcEEE-EEcCChhhHHH-----HHHhhhhhhhhhcCCCCccccccC---C
Q 016620 166 QTVGVIGAGRIGSAYARMMVEG-----F--KMNLI-YYDLYQATRLE-----KFVTAYGQFLKANGEQPVTWKRAS---S 229 (386)
Q Consensus 166 ~~vgIvG~G~IG~~iA~~L~~~-----f--g~~V~-~~d~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~---~ 229 (386)
.+|||+|+|.||+.+++.+.+. . +.+|. ++|++...... .+.+. ... + ... .... +
T Consensus 7 irvgIiG~G~VG~~~~~~l~~~~~~~~~g~~~~vvaV~d~~~~~~~~~~~~~~~~~~----~~~-~--~~~-~~~~~~~d 78 (331)
T 3c8m_A 7 INLSIFGLGNVGLNLLRIIRSFNEENRLGLKFNVVFVADSLHSYYNERIDIGKVISY----KEK-G--SLD-SLEYESIS 78 (331)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHHHCSSSEEEEEEEEECSSCEEECTTCCHHHHHHH----HHT-T--CGG-GCCSEECC
T ss_pred EeEEEEecCHHHHHHHHHHHhChHHHhcCCcEEEEEEEECChHHhhcccChHHHhhh----hcc-C--Ccc-cccCCCCC
Confidence 4799999999999999887431 1 35654 55665432110 01000 000 0 000 0123 7
Q ss_pred HHHHh-hhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcc-cCHHHHHHHHHcCC
Q 016620 230 MDEVL-READVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPV-IDEVALVEHLKQNP 290 (386)
Q Consensus 230 l~ell-~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~-vde~aL~~aL~~g~ 290 (386)
+++++ .+.|+|+.|+|.. .|.+.--+-....++.|.-+|...-..+ .+-+.|.++.++..
T Consensus 79 ~~~ll~~~iDvVv~~t~~~-~~~~~~~~~~~~AL~aGkhVvtanK~pla~~~~eL~~~A~~~g 140 (331)
T 3c8m_A 79 ASEALARDFDIVVDATPAS-ADGKKELAFYKETFENGKDVVTANKSGLANFWPEIMEYARSNN 140 (331)
T ss_dssp HHHHHHSSCSEEEECSCCC-SSSHHHHHHHHHHHHTTCEEEECCCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHhCCCCCEEEECCCCC-CccchHHHHHHHHHHCCCeEEecCchhhHHHHHHHHHHHHHcC
Confidence 88887 3579999999975 1111111223344556665555333233 23466777666544
No 492
>3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum}
Probab=92.81 E-value=0.15 Score=51.67 Aligned_cols=64 Identities=19% Similarity=0.191 Sum_probs=45.7
Q ss_pred CCeEEEEe-cChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCEEEEc
Q 016620 165 GQTVGVIG-AGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADVISLH 243 (386)
Q Consensus 165 g~~vgIvG-~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDiVvl~ 243 (386)
+++|.|.| .|.||+.+++.| ..-|.+|++.+|+..... ...+.....+.+.+..+|+|+.+
T Consensus 147 ~m~VLVTGatG~IG~~l~~~L-~~~G~~V~~l~R~~~~~~-----------------~v~~d~~~~~~~~l~~~D~Vih~ 208 (516)
T 3oh8_A 147 PLTVAITGSRGLVGRALTAQL-QTGGHEVIQLVRKEPKPG-----------------KRFWDPLNPASDLLDGADVLVHL 208 (516)
T ss_dssp CCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEESSSCCTT-----------------CEECCTTSCCTTTTTTCSEEEEC
T ss_pred CCEEEEECCCCHHHHHHHHHH-HHCCCEEEEEECCCCCcc-----------------ceeecccchhHHhcCCCCEEEEC
Confidence 78999999 599999999998 467999999998754310 00011112345667899999887
Q ss_pred cCC
Q 016620 244 PVL 246 (386)
Q Consensus 244 lPl 246 (386)
...
T Consensus 209 A~~ 211 (516)
T 3oh8_A 209 AGE 211 (516)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 493
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=92.77 E-value=0.16 Score=46.34 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=33.3
Q ss_pred ccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 162 LLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 162 ~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
.+.|+++.|.|. |.||+++|+.|+ .-|++|++.+|+...
T Consensus 4 m~~~k~vlVTGas~gIG~~ia~~l~-~~G~~V~~~~r~~~~ 43 (267)
T 2gdz_A 4 MVNGKVALVTGAAQGIGRAFAEALL-LKGAKVALVDWNLEA 43 (267)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCHHH
T ss_pred ccCCCEEEEECCCCcHHHHHHHHHH-HCCCEEEEEECCHHH
Confidence 478899999986 899999999985 679999999987643
No 494
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=92.77 E-value=0.41 Score=46.18 Aligned_cols=94 Identities=15% Similarity=0.050 Sum_probs=57.0
Q ss_pred cCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhh-----h
Q 016620 163 LKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLR-----E 236 (386)
Q Consensus 163 l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~-----~ 236 (386)
-.|.+|.|+|. |.+|...++.+ +..|++|++.. +... .+ + .++.+..........++.+.+. .
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla-~~~Ga~Vi~~~-~~~~-~~-~-------~~~lGa~~vi~~~~~~~~~~v~~~t~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQML-RLSGYIPIATC-SPHN-FD-L-------AKSRGAEEVFDYRAPNLAQTIRTYTKNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHH-HHTTCEEEEEE-CGGG-HH-H-------HHHTTCSEEEETTSTTHHHHHHHHTTTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHH-HHCCCEEEEEe-CHHH-HH-H-------HHHcCCcEEEECCCchHHHHHHHHccCC
Confidence 47899999999 89999999985 78999998875 3322 11 1 2222322111111233433332 3
Q ss_pred CCEEEEccCCChhhhhcccHHHHhcC-CCCcEEEEcC
Q 016620 237 ADVISLHPVLDKTTYHLINKERLATM-KKEAILVNCS 272 (386)
Q Consensus 237 aDiVvl~lPlt~~t~~li~~~~~~~m-k~gailIN~a 272 (386)
.|+|+-++.. +.+ -...+..+ +++..++.++
T Consensus 232 ~d~v~d~~g~-~~~----~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCITN-VES----TTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSCS-HHH----HHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECCCc-hHH----HHHHHHHhhcCCCEEEEEe
Confidence 7888888763 221 13455667 5777888775
No 495
>2x5o_A UDP-N-acetylmuramoylalanine--D-glutamate ligase; ATP-binding, cell cycle, cell division, cell shape, cell WAL biogenesis/degradation; HET: KCX VSV; 1.46A {Escherichia coli} PDB: 2wjp_A* 2xpc_A* 2y1o_A* 2jff_A* 2jfh_A* 2uuo_A* 2uup_A* 2vtd_A* 2vte_A* 2jfg_A* 2y66_A* 2y67_A* 2y68_A* 4uag_A* 1e0d_A* 1uag_A* 1eeh_A* 3uag_A* 2uag_A*
Probab=92.65 E-value=0.15 Score=50.71 Aligned_cols=114 Identities=18% Similarity=0.152 Sum_probs=69.5
Q ss_pred cCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEcCChhhHHHHHHhhhhhhhhhcCCCCcccc-ccCCHHHHhhhCCEEE
Q 016620 163 LKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWK-RASSMDEVLREADVIS 241 (386)
Q Consensus 163 l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~ell~~aDiVv 241 (386)
+.+++|.|||+|..|.+.|+.| ...|.+|.++|.+....... .+. .+ ..+. .... ++.+..+|.|+
T Consensus 3 ~~~~~v~viG~G~~G~~~a~~l-~~~G~~v~~~D~~~~~~~~~-------~l~-~G---~~~~~g~~~-~~~~~~~d~vV 69 (439)
T 2x5o_A 3 YQGKNVVIIGLGLTGLSCVDFF-LARGVTPRVMDTRMTPPGLD-------KLP-EA---VERHTGSLN-DEWLMAADLIV 69 (439)
T ss_dssp CTTCCEEEECCHHHHHHHHHHH-HTTTCCCEEEESSSSCTTGG-------GSC-TT---SCEEESSCC-HHHHHTCSEEE
T ss_pred CCCCEEEEEeecHHHHHHHHHH-HhCCCEEEEEECCCCcchhH-------Hhh-CC---CEEEECCCc-HHHhccCCEEE
Confidence 5788999999999999999887 68899999999765331000 111 12 2221 1112 45666899999
Q ss_pred EccCCC---hhhh-------hcccHH-H-HhcCCCCcEEEEcCCCcccCHHHHHHHHHcC
Q 016620 242 LHPVLD---KTTY-------HLINKE-R-LATMKKEAILVNCSRGPVIDEVALVEHLKQN 289 (386)
Q Consensus 242 l~lPlt---~~t~-------~li~~~-~-~~~mk~gailIN~aRg~~vde~aL~~aL~~g 289 (386)
+..... |.-. .++.+- . ...++...+-|--+.|+.--..-|...|++.
T Consensus 70 ~s~gi~~~~p~~~~a~~~~~~v~~~~~~~~~~~~~~vI~VTGTnGKTTT~~ml~~iL~~~ 129 (439)
T 2x5o_A 70 ASPGIALAHPSLSAAADAGIEIVGDIELFCREAQAPIVAITGSNGKSTVTTLVGEMAKAA 129 (439)
T ss_dssp ECTTSCTTCHHHHHHHHTTCEEECHHHHHHHHCCSCEEEEECSSSHHHHHHHHHHHHHHT
T ss_pred eCCCCCCCCHHHHHHHHCCCcEEEHHHHHHHhcCCCEEEEECCCCHHHHHHHHHHHHHhc
Confidence 875332 2211 233331 1 2235555666777778876555566666653
No 496
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=92.63 E-value=0.082 Score=47.25 Aligned_cols=77 Identities=13% Similarity=0.159 Sum_probs=49.3
Q ss_pred cCCCeEEEEe-cChhHHHHHHHHHhcCCc--EEEEEcCChhhHHHHHHhhhhhhhhhcCCCCccccccCCHHHHhhhCCE
Q 016620 163 LKGQTVGVIG-AGRIGSAYARMMVEGFKM--NLIYYDLYQATRLEKFVTAYGQFLKANGEQPVTWKRASSMDEVLREADV 239 (386)
Q Consensus 163 l~g~~vgIvG-~G~IG~~iA~~L~~~fg~--~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ell~~aDi 239 (386)
+.++++.|.| .|.||+.+++.|+ .-|. +|++.+|+........ ...............+++++++..|+
T Consensus 16 m~~~~vlVtGasg~iG~~l~~~L~-~~G~~~~V~~~~r~~~~~~~~~-------~~~~~~~~~D~~d~~~~~~~~~~~d~ 87 (242)
T 2bka_A 16 MQNKSVFILGASGETGRVLLKEIL-EQGLFSKVTLIGRRKLTFDEEA-------YKNVNQEVVDFEKLDDYASAFQGHDV 87 (242)
T ss_dssp HTCCEEEEECTTSHHHHHHHHHHH-HHTCCSEEEEEESSCCCCCSGG-------GGGCEEEECCGGGGGGGGGGGSSCSE
T ss_pred hcCCeEEEECCCcHHHHHHHHHHH-cCCCCCEEEEEEcCCCCccccc-------cCCceEEecCcCCHHHHHHHhcCCCE
Confidence 5678999999 5999999999985 6688 9999998754311000 00000000011122456677888999
Q ss_pred EEEccCCC
Q 016620 240 ISLHPVLD 247 (386)
Q Consensus 240 Vvl~lPlt 247 (386)
|+.+....
T Consensus 88 vi~~ag~~ 95 (242)
T 2bka_A 88 GFCCLGTT 95 (242)
T ss_dssp EEECCCCC
T ss_pred EEECCCcc
Confidence 99988754
No 497
>3mw9_A GDH 1, glutamate dehydrogenase 1; allostery, inhibition, oxidoreducta; HET: GLU GTP NAD; 2.40A {Bos taurus} SCOP: c.2.1.7 c.58.1.1 PDB: 3mvo_A* 3mvq_A* 3qmu_A* 3etd_A* 3ete_A* 3etg_A* 1l1f_A 1nr1_A 1nr7_A 1nqt_A 1hwx_A* 1hwy_A* 1hwz_A*
Probab=92.59 E-value=0.54 Score=47.44 Aligned_cols=115 Identities=18% Similarity=0.177 Sum_probs=68.4
Q ss_pred ccCCCeEEEEecChhHHHHHHHHHhcCCcEEEEEc--------CChh--hHHHHHHhhhhhhhhhcCCCCccccccCCHH
Q 016620 162 LLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYYD--------LYQA--TRLEKFVTAYGQFLKANGEQPVTWKRASSMD 231 (386)
Q Consensus 162 ~l~g~~vgIvG~G~IG~~iA~~L~~~fg~~V~~~d--------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 231 (386)
++.|+||.|-|+|++|+..|+.| ...|++|++.. +..- ..+..+.+..+ .....+ ......+ +
T Consensus 241 ~l~g~tVaVQG~GNVG~~aa~~L-~e~GakVVavsDs~G~iyd~~Gid~~~l~~~k~~~g----~i~~~~-~a~~~~~-~ 313 (501)
T 3mw9_A 241 GFGDKTFVVQGFGNVGLHSMRYL-HRFGAKCITVGESDGSIWNPDGIDPKELEDFKLQHG----TILGFP-KAKIYEG-S 313 (501)
T ss_dssp SSTTCEEEEECCSHHHHHHHHHH-HHTTCEEEEEECSSCEEECTTCCCHHHHHHHHHHHS----SSTTCT-TSEEECS-C
T ss_pred CcCCCEEEEECCCHHHHHHHHHH-HHCCCEEEEEEcCCceEECCCCCCHHHHHHHHHhcC----Ceeccc-Cceeecc-c
Confidence 58999999999999999999998 57899998742 2211 11111111100 000000 0111111 1
Q ss_pred HHhhhCCEEEEccCCChhhhhcccHHHHhcCCCCcEEEEcCCCcccCHHHHHHHHHcCCc
Q 016620 232 EVLREADVISLHPVLDKTTYHLINKERLATMKKEAILVNCSRGPVIDEVALVEHLKQNPM 291 (386)
Q Consensus 232 ell~~aDiVvl~lPlt~~t~~li~~~~~~~mk~gailIN~aRg~~vde~aL~~aL~~g~i 291 (386)
=+-..|||.+=|.- .+.|+.+...+++ -.+++-.+-+.+ ..+| .+.|.+..|
T Consensus 314 il~~~~DIliPcA~-----~n~I~~~na~~l~-akiV~EgAN~p~-T~eA-~~iL~~rGI 365 (501)
T 3mw9_A 314 ILEVDCDILIPAAS-----EKQLTKSNAPRVK-AKIIAEGANGPT-TPEA-DKIFLERNI 365 (501)
T ss_dssp GGGSCCSEEEECSS-----SCCBCTTTGGGCC-CSEEECCSSSCB-CHHH-HHHHHHTTC
T ss_pred cccccceEEeeccc-----cCccCHhHHHHcC-ceEEEeCCCCcC-CHHH-HHHHHHCCC
Confidence 12357999887764 5677887777775 458888888874 4443 456655443
No 498
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=92.56 E-value=0.3 Score=46.04 Aligned_cols=38 Identities=24% Similarity=0.521 Sum_probs=32.0
Q ss_pred cccCCCeEEEEecChhHHHHHHHHHhcCCc-EEEEEcCCh
Q 016620 161 NLLKGQTVGVIGAGRIGSAYARMMVEGFKM-NLIYYDLYQ 199 (386)
Q Consensus 161 ~~l~g~~vgIvG~G~IG~~iA~~L~~~fg~-~V~~~d~~~ 199 (386)
..|++++|.|||+|.+|..+|+.|+ ..|. ++..+|...
T Consensus 32 ~kL~~~~VlVvGaGGlGs~va~~La-~aGVG~i~lvD~D~ 70 (292)
T 3h8v_A 32 EKIRTFAVAIVGVGGVGSVTAEMLT-RCGIGKLLLFDYDK 70 (292)
T ss_dssp CGGGGCEEEEECCSHHHHHHHHHHH-HHTCSEEEEECCCB
T ss_pred HHHhCCeEEEECcCHHHHHHHHHHH-HcCCCEEEEECCCc
Confidence 4699999999999999999999986 4454 788888654
No 499
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=92.48 E-value=0.21 Score=46.28 Aligned_cols=40 Identities=18% Similarity=0.154 Sum_probs=33.4
Q ss_pred cccCCCeEEEEec-ChhHHHHHHHHHhcCCcEEEEEcCChhh
Q 016620 161 NLLKGQTVGVIGA-GRIGSAYARMMVEGFKMNLIYYDLYQAT 201 (386)
Q Consensus 161 ~~l~g~~vgIvG~-G~IG~~iA~~L~~~fg~~V~~~d~~~~~ 201 (386)
..+.|+++.|.|. |.||+++|+.|+ .-|++|++.+++...
T Consensus 25 ~~~~~k~~lVTGas~GIG~aia~~la-~~G~~V~~~~~~~~~ 65 (280)
T 4da9_A 25 TQKARPVAIVTGGRRGIGLGIARALA-ASGFDIAITGIGDAE 65 (280)
T ss_dssp SCCCCCEEEEETTTSHHHHHHHHHHH-HTTCEEEEEESCCHH
T ss_pred hccCCCEEEEecCCCHHHHHHHHHHH-HCCCeEEEEeCCCHH
Confidence 4688999999986 789999999985 789999999864433
No 500
>4h7p_A Malate dehydrogenase; ssgcid, structural G seattle structural genomics center for infectious disease, oxidoreductase; 1.30A {Leishmania major}
Probab=92.47 E-value=0.41 Score=46.23 Aligned_cols=114 Identities=18% Similarity=0.198 Sum_probs=67.5
Q ss_pred cCCCeEEEEec-ChhHHHHHHHHHhc--CC----cEEEEEcCChhhH-HHHH-HhhhhhhhhhcC-CCCccccccCCHHH
Q 016620 163 LKGQTVGVIGA-GRIGSAYARMMVEG--FK----MNLIYYDLYQATR-LEKF-VTAYGQFLKANG-EQPVTWKRASSMDE 232 (386)
Q Consensus 163 l~g~~vgIvG~-G~IG~~iA~~L~~~--fg----~~V~~~d~~~~~~-~~~~-~~~~~~~~~~~~-~~~~~~~~~~~l~e 232 (386)
....+|.|+|. |.||++++-+|+++ || .++..||...... .+.. .+ +.... ..........+..+
T Consensus 22 ~~~vKVaViGAaG~IG~~la~~la~~~l~~~~~~~eL~L~Di~~~~~~~~Gva~D-----L~~~~~~~~~~~~~~~~~~~ 96 (345)
T 4h7p_A 22 MSAVKVAVTGAAGQIGYALVPLIARGALLGPTTPVELRLLDIEPALKALAGVEAE-----LEDCAFPLLDKVVVTADPRV 96 (345)
T ss_dssp CCCEEEEEESTTSHHHHHHHHHHHHTTTTCTTCCEEEEEECCGGGHHHHHHHHHH-----HHHTTCTTEEEEEEESCHHH
T ss_pred CCCCEEEEECcCcHHHHHHHHHHHhccccCCCCccEEEEECCCCccccchhhhhh-----hhhcCccCCCcEEEcCChHH
Confidence 55669999997 99999999887542 45 3799999765321 1110 11 11111 11112233467889
Q ss_pred HhhhCCEEEEcc--CCChh-hhh-cc--cHH--------HHhcCCCCcEEEEcCCCcccCHHHHH
Q 016620 233 VLREADVISLHP--VLDKT-TYH-LI--NKE--------RLATMKKEAILVNCSRGPVIDEVALV 283 (386)
Q Consensus 233 ll~~aDiVvl~l--Plt~~-t~~-li--~~~--------~~~~mk~gailIN~aRg~~vde~aL~ 283 (386)
.+++||+|+++. |..|. |+. ++ |.+ .-+..+|+++++-++- .+|.-..+
T Consensus 97 a~~~advVvi~aG~prkpGmtR~DLl~~Na~I~~~~~~~i~~~a~~~~~vlvvsN--Pvd~~~~i 159 (345)
T 4h7p_A 97 AFDGVAIAIMCGAFPRKAGMERKDLLEMNARIFKEQGEAIAAVAASDCRVVVVGN--PANTNALI 159 (345)
T ss_dssp HTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS--SHHHHHHH
T ss_pred HhCCCCEEEECCCCCCCCCCCHHHHHHHhHHHHHHHHHHHHhhccCceEEEEeCC--CcchHHHH
Confidence 999999999975 43331 221 22 111 2233568888877764 57766654
Done!