BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016622
(386 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P53383|MRP_SYNY3 Protein mrp homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=mrp PE=3 SV=1
Length = 353
Score = 219 bits (557), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 128/311 (41%), Positives = 190/311 (61%), Gaps = 14/311 (4%)
Query: 78 NDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANE 137
+ VL L + DP+ +V ++D+ I A G VSF L LTTPACP+++ + +
Sbjct: 5 DAVLTVLRPVQDPELQKSLVELNMIRDVAI--AGGTVSFTLVLTTPACPLREFIVEDCEK 62
Query: 138 VVLAIPWVNKVNVTMSAQPARPIFAEQLP--EGLQKISNIVAVSSCKGGVGKSTVAVNLA 195
V +P V KV V ++A+ + + LP + + ++ NI+A+SS KGGVGKSTVAVN+A
Sbjct: 63 AVKTLPGVEKVEVKVTAETPQ---QKSLPDRQSVGQVKNIIAISSGKGGVGKSTVAVNVA 119
Query: 196 YTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEM--NPEKRTIIPTEYLGVKLVSFGF- 252
LA GA VG+ DAD+YGP+ PTM+ +++ +P+ + P G+K+VS GF
Sbjct: 120 VALAQTGAAVGLLDADIYGPNAPTMLGLSGAAVQVQNSPQGEVLEPVFNHGIKMVSMGFL 179
Query: 253 -SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIV 311
I RGPM++G+I Q L WG LDYL++DMPPGTGD QLTL Q VP+ AVIV
Sbjct: 180 IDPDQPVIWRGPMLNGIIRQFLYQVNWGALDYLIVDMPPGTGDAQLTLTQSVPMAGAVIV 239
Query: 312 TTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF---DADGKRYYPFGRGSGSQVVQQF 368
TTPQ ++ +D +G++MF ++ V + +VENM +F D ++Y FG G G + ++
Sbjct: 240 TTPQTVSLLDARRGLKMFQQMGVNVLGIVENMSYFIPPDLPDRQYDLFGSGGGEKASKEL 299
Query: 369 GIPHLFDLPIR 379
+P L +P+
Sbjct: 300 NVPLLGCVPLE 310
>sp|Q9RVM9|MRP_DEIRA Protein mrp homolog OS=Deinococcus radiodurans (strain ATCC 13939 /
DSM 20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB
9279 / R1 / VKM B-1422) GN=mrp PE=3 SV=1
Length = 350
Score = 206 bits (525), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 135/312 (43%), Positives = 188/312 (60%), Gaps = 27/312 (8%)
Query: 78 ND-VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 136
ND +L+ALS + DP+ D+VS G ++ +++ + +V ++ LTTPACP+K E
Sbjct: 2 NDALLRALSTVNDPELHRDLVSLGMIERAELSGDVAQV--KVNLTTPACPLKGQIELDVR 59
Query: 137 EVVLAIPWVNKVNVTMSA------QPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTV 190
+L +P V V + A QPA P + ++V V S KGGVGKS+V
Sbjct: 60 SALLQVPGVRDVQIEFGAMVRAATQPALP-----------GVKHVVLVGSGKGGVGKSSV 108
Query: 191 AVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSF 250
AVNLA +LA GARVG+ DADVYGPS+ M+ + N E R + P E GV+ +S
Sbjct: 109 AVNLAASLARDGARVGLLDADVYGPSVAHMLGQGQARVTAN-EDRKMRPIEAHGVRFISM 167
Query: 251 G-FSGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAA 308
S G+A++ RGPM+ I Q L + WGELDYL++D+PPGTGD+QL+L Q V +T A
Sbjct: 168 ANLSPAGQALVWRGPMLHSAIQQFLKDSAWGELDYLIVDLPPGTGDVQLSLTQTVQVTGA 227
Query: 309 VIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDA--DGKRYYPFGRGSGSQVVQ 366
VIVTTPQ +A ID A+ + MF K VP + VVENM +F A G Y FGRG ++ +
Sbjct: 228 VIVTTPQDVALIDAARAIDMFRKASVPVLGVVENMSYFVAPDTGLTYDIFGRGGSRKLGE 287
Query: 367 QFGIPHLFDLPI 378
Q+ P L ++P+
Sbjct: 288 QY--PLLGEIPL 297
>sp|Q9ZMM5|MRP_HELPJ Protein mrp homolog OS=Helicobacter pylori (strain J99) GN=mrp PE=3
SV=1
Length = 368
Score = 205 bits (522), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 118/311 (37%), Positives = 185/311 (59%), Gaps = 9/311 (2%)
Query: 77 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 136
+ DVL AL II P+F DIVS GFVK++ +++ ++ +E+ + + + + +
Sbjct: 4 QEDVLNALKTIIYPNFEKDIVSFGFVKNITLHD--NQLGLLIEIPSSSEETSAILRENIS 61
Query: 137 EVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK-ISNIVAVSSCKGGVGKSTVAVNLA 195
+ + V +N+ + P +P + + L K I ++V +SS KGGVGKST +VNL+
Sbjct: 62 KA-MQEKGVKALNLDIKT-PPKPQAPKPTTKNLAKNIKHVVMISSGKGGVGKSTTSVNLS 119
Query: 196 YTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF-SG 254
LA + +VG+ DADVYGP++P M+ +N + M+P + +IP + GV ++S G
Sbjct: 120 IALANLNQKVGLLDADVYGPNIPRMMGLQNADVIMDPSGKKLIPLKAFGVSVMSMGLLYD 179
Query: 255 QGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTT 313
+G++++ RGPM+ I Q+L+ WG+LD LV+DMPPGTGD QLTL Q VPL+A + VTT
Sbjct: 180 EGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQAVPLSAGITVTT 239
Query: 314 PQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIP 371
PQ ++ D + + MF KL +P +VENM F + K FG S S +++ +
Sbjct: 240 PQIVSLDDAKRSLDMFKKLHIPIAGIVENMGSFVCEHCKKESEIFGSNSMSGLLEAYNTQ 299
Query: 372 HLFDLPIRPTV 382
L LP+ P V
Sbjct: 300 ILAKLPLEPKV 310
>sp|O24999|MRP_HELPY Protein mrp homolog OS=Helicobacter pylori (strain ATCC 700392 /
26695) GN=mrp PE=3 SV=2
Length = 368
Score = 204 bits (518), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 117/311 (37%), Positives = 186/311 (59%), Gaps = 9/311 (2%)
Query: 77 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 136
+ DVL AL II P+F DIVS GFVK++ +++ ++ +E+ + + + + +
Sbjct: 4 QEDVLNALKTIIYPNFEKDIVSFGFVKNITLHD--DQLGLLIEIPSSSEETSAILRENIS 61
Query: 137 EVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK-ISNIVAVSSCKGGVGKSTVAVNLA 195
+ + V +N+ + P +P + + L K I ++V +SS KGGVGKST +VNL+
Sbjct: 62 KA-MQEKGVKALNLDIKT-PPKPQAPKPTTKNLAKNIKHVVMISSGKGGVGKSTTSVNLS 119
Query: 196 YTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF-SG 254
LA + +VG+ DADVYGP++P M+ ++ + M+P + +IP + GV ++S G
Sbjct: 120 IALANLNQKVGLLDADVYGPNIPRMMGLQSADVIMDPSGKKLIPLKAFGVSVMSMGLLYD 179
Query: 255 QGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTT 313
+G++++ RGPM+ I Q+L+ WG+LD LV+DMPPGTGD QLTL Q VPL+A + VTT
Sbjct: 180 EGQSLIWRGPMLMRAIEQMLSDIIWGDLDVLVVDMPPGTGDAQLTLAQAVPLSAGITVTT 239
Query: 314 PQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIP 371
PQ ++ D + + MF KL +P +VENM F + K FG S S++++ +
Sbjct: 240 PQIVSLDDAKRSLDMFKKLHIPIAGIVENMGSFVCEHCKKESEIFGSNSMSELLEAYHTQ 299
Query: 372 HLFDLPIRPTV 382
L LP+ P V
Sbjct: 300 ILAKLPLEPKV 310
>sp|P45135|MRP_HAEIN Protein mrp homolog OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=mrp PE=3 SV=2
Length = 370
Score = 198 bits (503), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 115/296 (38%), Positives = 168/296 (56%), Gaps = 12/296 (4%)
Query: 90 PDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPAC--PIKDMFEQRANEVVLAIPWVNK 147
P D++ +K ++ G + R+EL P + +Q ++ +L
Sbjct: 27 PTLQKDLIVLNTLKKVE----KGGDTLRIELQLPFAWNSGAEQLKQAVSDALLKATDCKL 82
Query: 148 VNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGI 207
+ ++ Q A A P ++ + NI+AVSS KGGVGKS+V+VNLA L GARVGI
Sbjct: 83 IKWAVAYQIATLKRANNQP-AVKGVKNIIAVSSGKGGVGKSSVSVNLALALQAQGARVGI 141
Query: 208 FDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMV 265
DAD+YGPS+P M+ ++ +P+ + I P + G+ S GF + I RGPM
Sbjct: 142 LDADIYGPSIPHMLGAADQR-PTSPDNQHITPIKAHGLSANSIGFLMNEDSATIWRGPMA 200
Query: 266 SGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKG 325
S ++QLL T W LDYLVIDMPPGTGDIQLTL Q +P+T AV+VTTPQ +A +D KG
Sbjct: 201 SSALSQLLNETLWDSLDYLVIDMPPGTGDIQLTLSQQIPVTGAVVVTTPQDIALLDAVKG 260
Query: 326 VRMFSKLKVPCIAVVENMC-HFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIR 379
+ MF ++ VP + +VENM H ++ G FG G ++ +++ + L LP+
Sbjct: 261 ISMFERVSVPVLGIVENMSMHICSECGHHEAIFGTGGAEKMAEKYNVKVLAQLPLH 316
>sp|P72190|YCAB_PSEFR Uncharacterized ATP-binding protein in capB 3'region OS=Pseudomonas
fragi PE=3 SV=1
Length = 287
Score = 190 bits (482), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 112/219 (51%), Positives = 140/219 (63%), Gaps = 5/219 (2%)
Query: 164 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSP 223
Q+P GL + NIVAV+S KGGVGKST A NLA LA GARVGI DAD+YGPS M
Sbjct: 31 QIP-GLANVKNIVAVASGKGGVGKSTTAANLALALAREGARVGILDADIYGPSQGVMFGI 89
Query: 224 ENRLLEMNPEKRTIIPTEYLGVKLVSFGFSGQGRAIM--RGPMVSGVINQLLTTTEWGEL 281
+++ +P E GV+++S F M RGPMVSG + QL+T T W +L
Sbjct: 90 AEGTRPKIRDQKWFVPIEAHGVEVMSMAFLTDDNTPMVWRGPMVSGALLQLVTQTAWNDL 149
Query: 282 DYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
DYLVIDMPPGTGDIQLTL Q VP+ +VIVTTPQ LA +D KGV MF K+ +P + VVE
Sbjct: 150 DYLVIDMPPGTGDIQLTLAQKVPVAGSVIVTTPQDLALLDARKGVEMFRKVNIPVLGVVE 209
Query: 342 NMC-HFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPI 378
NM H ++ G + FG G G ++ Q+G+ L LP+
Sbjct: 210 NMAVHICSNCGHAEHLFGEGGGEKLATQYGVEVLASLPL 248
>sp|Q54F15|NUBPL_DICDI Iron-sulfur protein NUBPL OS=Dictyostelium discoideum GN=nubpl PE=3
SV=1
Length = 323
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 133/215 (61%), Gaps = 4/215 (1%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 228
++ I NI+AVSS KGGVGKST AVN+A L+ VG+ D DV+GPS+P M+ +N
Sbjct: 53 IEGIKNIIAVSSAKGGVGKSTCAVNIALGLSSHNLSVGLLDVDVFGPSIPLMMDLKNHEK 112
Query: 229 EMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVI 286
E +IP + G+K +S GF + I RGPMV + +LL T+WG LD LV
Sbjct: 113 PFTNELNQMIPLQNYGIKCMSMGFLVNEDDPIIWRGPMVGSALEKLLRQTDWGHLDVLVC 172
Query: 287 DMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF 346
D+PPGTGD LT+CQ VPLT AVIV+TPQ +A DV +GV MF K++VP + +VENM +F
Sbjct: 173 DLPPGTGDAILTMCQRVPLTGAVIVSTPQDVALADVVRGVNMFKKVEVPILGLVENMSYF 232
Query: 347 DAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIR 379
+ + + FG ++ GI L D+PI
Sbjct: 233 NCPHCNESTHIFGNEGAKNTAKKMGINFLGDVPIH 267
>sp|P0AF08|MRP_ECOLI Protein mrp OS=Escherichia coli (strain K12) GN=mrp PE=3 SV=1
Length = 369
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 5/216 (2%)
Query: 168 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 227
G+ + NI+AVSS KGGVGKS+ AVNLA LA GA+VGI DAD+YGPS+PTM+ EN+
Sbjct: 102 GINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQR 161
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 285
+P+ + P G+ S G+ + + RGPM S + Q+L T W +LDYLV
Sbjct: 162 -PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLV 220
Query: 286 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMC- 344
+DMPPGTGDIQLTL Q +P+T AV+VTTPQ +A ID KG+ MF K++VP + +VENM
Sbjct: 221 LDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSV 280
Query: 345 HFDADGKRYYP-FGRGSGSQVVQQFGIPHLFDLPIR 379
H ++ + P FG G ++ +++ L +P+
Sbjct: 281 HICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLH 316
>sp|P0AF09|MRP_ECOL6 Protein mrp OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928
/ UPEC) GN=mrp PE=3 SV=1
Length = 369
Score = 187 bits (474), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 140/216 (64%), Gaps = 5/216 (2%)
Query: 168 GLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRL 227
G+ + NI+AVSS KGGVGKS+ AVNLA LA GA+VGI DAD+YGPS+PTM+ EN+
Sbjct: 102 GINGVKNIIAVSSGKGGVGKSSTAVNLALALAAEGAKVGILDADIYGPSIPTMLGAENQR 161
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 285
+P+ + P G+ S G+ + + RGPM S + Q+L T W +LDYLV
Sbjct: 162 -PTSPDGTHMAPIMSHGLATNSIGYLVTDDNAMVWRGPMASKALMQMLQETLWPDLDYLV 220
Query: 286 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMC- 344
+DMPPGTGDIQLTL Q +P+T AV+VTTPQ +A ID KG+ MF K++VP + +VENM
Sbjct: 221 LDMPPGTGDIQLTLAQNIPVTGAVVVTTPQDIALIDAKKGIVMFEKVEVPVLGIVENMSV 280
Query: 345 HFDADGKRYYP-FGRGSGSQVVQQFGIPHLFDLPIR 379
H ++ + P FG G ++ +++ L +P+
Sbjct: 281 HICSNCGHHEPIFGTGGAEKLAEKYHTQLLGQMPLH 316
>sp|O66946|MRP_AQUAE Protein mrp homolog OS=Aquifex aeolicus (strain VF5) GN=mrp PE=3
SV=1
Length = 364
Score = 182 bits (462), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 123/333 (36%), Positives = 189/333 (56%), Gaps = 33/333 (9%)
Query: 76 AENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRA 135
A DV++AL + D G + VKD+++ +G V + P ++D+ +
Sbjct: 2 AVQDVIEALKKETLEDVGINQNLAQLVKDIKM---VGNV-LTIVFEPPKQGLEDIIRAKV 57
Query: 136 NEVVLAIPWVNKVNVTMSAQPAR--------------------PIFAEQLPEGLQKISNI 175
+ + +P V K++V A+ P+F + G + +I
Sbjct: 58 IDALGNLPEVQKIDVKFVKPQAQIPVKQQAPQQQQTPPPQTQQPMFTRKKVPG---VKHI 114
Query: 176 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 235
+AV S KGGVGKSTVA NLA L+ +G +VG+ DADVYGPS+PT+ + + ++ +R
Sbjct: 115 IAVGSGKGGVGKSTVAANLAVALSQLGYKVGLLDADVYGPSVPTLFGLKGERVTVDQFQR 174
Query: 236 TIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGT 292
IIP E G+K++S GF S I RGPM+ + + L +T+WG LD+LV+D+PPGT
Sbjct: 175 -IIPVEKYGLKILSIGFMLPSEDTPIIWRGPMLMKALTEFLFSTKWGNLDFLVMDLPPGT 233
Query: 293 GDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHF--DADG 350
GD+Q+TL Q V LT AV+VTTPQ +A DV K V MF ++ +P + V+ENM +F +D
Sbjct: 234 GDVQITLAQNVELTGAVVVTTPQDVALADVKKAVSMFREVNIPVLGVIENMAYFICPSDK 293
Query: 351 KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVS 383
++YY FG+G ++ +G+ L +PI P V+
Sbjct: 294 QKYYIFGKGKVAEFANAYGLKILGSIPIDPEVA 326
>sp|Q4UKB5|MRP_RICFE Protein mrp homolog OS=Rickettsia felis (strain ATCC VR-1525 /
URRWXCal2) GN=mrp PE=3 SV=1
Length = 318
Score = 170 bits (430), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/278 (33%), Positives = 151/278 (54%), Gaps = 22/278 (7%)
Query: 112 GEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK 171
+ F ++++ + + +A + + I +NK+ + + A++ ++
Sbjct: 36 NNIGFSIDISGKNKLEAEELKAKAIDKLNEISEINKITIVFTESKPMEKKAQKPKHFVEN 95
Query: 172 ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMN 231
+ I+ V+S KGGVGKST++ +A L+ RVGI DAD+YGPS+P + +N
Sbjct: 96 VKKIILVASGKGGVGKSTISALIAQQLSLENYRVGIVDADIYGPSIP-------HIFGIN 148
Query: 232 PEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLV 285
+T IIP ++++S GF I RGPM S I QLL+ T+W LDYL+
Sbjct: 149 EVPKTKDGRIIPITVKSIQVISIGFFVKDHSAIIWRGPMASKTIYQLLSVTKWDNLDYLI 208
Query: 286 IDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCH 345
IDMPPGTGDI L++ + L +IVTTPQK++ IDV + + ++ KL +P + ++ENM
Sbjct: 209 IDMPPGTGDIHLSMLENYHLDGVIIVTTPQKISEIDVIRSIDLYQKLNLPILGIIENMS- 267
Query: 346 FDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVS 383
Y F SG + Q++ IP + +PI P ++
Sbjct: 268 --------YMFESNSGGHLSQKYNIPLIAQIPIMPQIA 297
>sp|Q1RHB0|MRP_RICBR Protein mrp homolog OS=Rickettsia bellii (strain RML369-C) GN=mrp
PE=3 SV=1
Length = 318
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/265 (37%), Positives = 149/265 (56%), Gaps = 30/265 (11%)
Query: 127 IKDMFEQRANEVVL--AIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGG 184
IK+ ++ NE+V I V + T+ +P +P + E ++KI + V+S KGG
Sbjct: 55 IKNTAIKKLNEIVGIGKITIVFTESKTVEKKPQKP---KHFVENVKKI---ILVASGKGG 108
Query: 185 VGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT----IIPT 240
VGKST++ +A L+ RVGI DAD+YGPS+P + +N +T IIP
Sbjct: 109 VGKSTISALIAQQLSLENHRVGIVDADIYGPSIP-------HIFGINEVPQTVGGRIIPV 161
Query: 241 EYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLT 298
++++S GF I RGPM S I QLL+ T+W LDYL+IDMPPGTGDI L+
Sbjct: 162 RAKNIEVISIGFFVKNYSAIIWRGPMASKTIYQLLSVTKWDNLDYLIIDMPPGTGDIHLS 221
Query: 299 LCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDADGKRYYPFGR 358
+ + L VIVTTPQK++ IDV + + ++ KL +P I ++ENM F
Sbjct: 222 MLENYHLNGVVIVTTPQKMSEIDVVRSIDLYQKLNLPIIGIIENMSDL---------FDG 272
Query: 359 GSGSQVVQQFGIPHLFDLPIRPTVS 383
SGS + Q++ IP + +P+ P ++
Sbjct: 273 NSGSHLSQKYNIPLIAQIPVIPKIA 297
>sp|Q57731|Y283_METJA Uncharacterized ATP-binding protein MJ0283 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0283 PE=3 SV=1
Length = 290
Score = 167 bits (423), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/230 (41%), Positives = 137/230 (59%), Gaps = 10/230 (4%)
Query: 158 RPIFAEQ---LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYG 214
+ + A+Q + E + KI + + + S KGGVGKSTV VNLA L MG +VG+ DAD++G
Sbjct: 21 KKLLAQQDAKIRENMSKIKHKIVILSGKGGVGKSTVTVNLAAALNLMGKKVGVLDADIHG 80
Query: 215 PSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQ 271
P++P M+ EN P I T+ G+K +S G+ + I RGP VSG I Q
Sbjct: 81 PNIPKMLGVENTQPMAGPAGIFPIVTKD-GIKTMSIGYLLPDDKTPVIWRGPKVSGAIRQ 139
Query: 272 LLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVP-LTAAVIVTTPQKLAFIDVAKGVRMFS 330
L+ WGELDYL+ID PPGTGD QLT+ Q +P + A+IVTTP++++ +DV K + M
Sbjct: 140 FLSDVVWGELDYLLIDTPPGTGDEQLTIMQSIPDIDGAIIVTTPEEVSVLDVKKSIMMAK 199
Query: 331 KLKVPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPI 378
L +P I ++ENM F K FGRG G + ++ G+ L +P+
Sbjct: 200 MLNIPIIGIIENMSGFVCPYCNKVVDIFGRGGGEKAAKELGVEFLGRIPL 249
>sp|Q92JA4|MRP_RICCN Protein mrp homolog OS=Rickettsia conorii (strain ATCC VR-613 /
Malish 7) GN=mrp PE=3 SV=1
Length = 319
Score = 166 bits (420), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/299 (33%), Positives = 160/299 (53%), Gaps = 25/299 (8%)
Query: 89 DPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKV 148
D F +++S +K I ++ ++S + +L +K + + NE I VNK+
Sbjct: 20 DGTFLNEVISDIIIKGNNIGFSI-DISGKNKLEAEEIRLKAI--NKLNE----ISEVNKI 72
Query: 149 NVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIF 208
+ + ++ ++ + I+ V+S KGGVGKST++ +A L+ RVGI
Sbjct: 73 TIVFTESKPMEKKVQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLANYRVGIV 132
Query: 209 DADVYGPSLPTMVSPENRLLEMNPEKRT--IIPTEYLGVKLVSFGF--SGQGRAIMRGPM 264
DAD+YGPS+P + + P+ + IIP ++++S GF I RGPM
Sbjct: 133 DADIYGPSIPHIFG-----INEVPQTKDGRIIPVLAQSIEIISIGFFVKDHSAIIWRGPM 187
Query: 265 VSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAK 324
S I QLL+ T+W LDYL+IDMPPGTGDI L++ + L +IVTTPQK++ IDV +
Sbjct: 188 ASKTIYQLLSVTKWDNLDYLIIDMPPGTGDIHLSILENYHLDGVIIVTTPQKISEIDVIR 247
Query: 325 GVRMFSKLKVPCIAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVS 383
+ ++ KL +P + ++ENM Y SG + Q++ IP + +PI P ++
Sbjct: 248 SIDLYQKLNLPILGIIENMS---------YMLKNNSGGHLSQKYNIPLIAQMPITPQIA 297
>sp|P53382|MRP_MYCLE Protein mrp homolog OS=Mycobacterium leprae (strain TN) GN=mrp PE=3
SV=2
Length = 383
Score = 164 bits (415), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 108/325 (33%), Positives = 171/325 (52%), Gaps = 27/325 (8%)
Query: 80 VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVV 139
V AL+++IDP+ I G VK++ I E G V + LT +CP K +R + +
Sbjct: 15 VSTALAKVIDPELQRPITELGMVKNIDI-EPGGNVQVGIYLTIASCPKKSEISKRVTKAI 73
Query: 140 LAIPWVNKVNVTMS--AQPARPIFAEQLPEGLQK----------ISNIVAVSSCKGGVGK 187
+P V V++ + R ++L ++ ++ + V+S KGGVGK
Sbjct: 74 ADVPGTAAVEVSLDVMSDEQRTKLRKKLRGDAREPMIPFAQPNSLTRVYTVASGKGGVGK 133
Query: 188 STVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKL 247
STV VNLA +A G VG+ DAD++G S+P M+ R +++ + I+P VK+
Sbjct: 134 STVTVNLATAIAARGLAVGVLDADIHGHSIPRMMGSNQRPIQL---ESMILPPIVHEVKV 190
Query: 248 VSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPL 305
+S G +G I RGPM+ + Q L+ WG+LD L++D+PPGTGDI +++ Q++P
Sbjct: 191 ISIGQFTEGNTPVIWRGPMLHRALQQFLSDVYWGDLDVLMLDLPPGTGDIAISVAQLIPN 250
Query: 306 TAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPCIAVVENMCHFDA-DGKRYYPFGRGSGSQ 363
++VTTPQ LA +VA+ + + + + VVENM DG R FG G G Q
Sbjct: 251 AEILVVTTPQ-LAAAEVAERAGSIALQTRQRIVGVVENMSGLMMPDGSRLQVFGEGGGQQ 309
Query: 364 VVQQFG------IPHLFDLPIRPTV 382
V ++ +P L +P+ P +
Sbjct: 310 VAERLSRAVGTDVPLLGQIPLDPAL 334
>sp|P50863|SALA_BACSU Protein mrp homolog SalA OS=Bacillus subtilis (strain 168) GN=salA
PE=2 SV=1
Length = 352
Score = 162 bits (410), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/316 (31%), Positives = 168/316 (53%), Gaps = 19/316 (6%)
Query: 77 ENDVLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRAN 136
E++V K + ++ +P + VK+++I +S ++ L + +Q
Sbjct: 4 EDEVRKLVGEMREPFLQRPLGELDAVKEIKIKPEKRHISVKVALAKTGTAEQMQIQQEIV 63
Query: 137 EVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQK----ISN---IVAVSSCKGGVGKST 189
V L V + P + + P +K + N +AV+S KGGVGKST
Sbjct: 64 NV-LKGAGAETVGLRFEELPEETVAKFRAPSAEKKTLLNMDNPPVFLAVASGKGGVGKST 122
Query: 190 VAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNP--EKRTIIPTEYLGVKL 247
V+VNLA +LA +G +VG+ DAD+YG S+P M+ + + P E ++P E GVK+
Sbjct: 123 VSVNLAISLARLGKKVGLIDADIYGFSVPDMMG-----ITVRPTIEGEKLLPVERFGVKV 177
Query: 248 VSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPL 305
+S GF + A + RGPM+ ++N EWGE+DY+V+D+PPGTGD+ L + ++P
Sbjct: 178 MSMGFFVEENAPVVWRGPMLGKMLNNFFHEVEWGEVDYIVLDLPPGTGDVALDVHTMLPS 237
Query: 306 TAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDA--DGKRYYPFGRGSGSQ 363
+IV+TP A A+ M K + V+ENM ++++ G+R Y FG+G G +
Sbjct: 238 CKEIIVSTPHPTAAFVAARAGSMAIKTDHEVVGVIENMAYYESAKTGEREYVFGKGGGDK 297
Query: 364 VVQQFGIPHLFDLPIR 379
+ ++ +P L +P++
Sbjct: 298 LAEELNVPLLGRIPLK 313
>sp|O58667|Y949_PYRHO Uncharacterized ATP-binding protein PH0949 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH0949 PE=3 SV=1
Length = 295
Score = 161 bits (407), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 133/218 (61%), Gaps = 17/218 (7%)
Query: 176 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 235
+AV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ + E+ EK
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVDKE--EVYAEKF 90
Query: 236 T-----IIP--TEYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 282
+IP T+++G +K++S G I RGP+V+ I QLL +WG LD
Sbjct: 91 DDGHFEMIPPTTDFMGQVTPIKVMSMGMMVPEDQPVIWRGPLVTKAIKQLLGDVKWGSLD 150
Query: 283 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 342
+++ID PPGTGD LT+ Q + L AA+IVTTPQ++A +D K V M K++VP +AVVEN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIKLDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYVAVVEN 210
Query: 343 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPI 378
M + G + FG G G ++ Q+ G+ L +PI
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAQKEGVDFLGKIPI 248
>sp|Q9V0D9|Y851_PYRAB Uncharacterized ATP-binding protein PYRAB08510 OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=PYRAB08510 PE=3 SV=1
Length = 295
Score = 158 bits (399), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 96/218 (44%), Positives = 131/218 (60%), Gaps = 17/218 (7%)
Query: 176 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKR 235
VAV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M+ E E+ EK
Sbjct: 33 VAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMLGVEKE--EIYAEKF 90
Query: 236 -----TIIP--TEYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 282
+IP +++G +K++S G I RG +V+ I QLL +WG LD
Sbjct: 91 DDGHFEMIPPMADFMGQVTPIKVMSMGMMVPEDQPIIWRGALVTKAIKQLLGDVKWGSLD 150
Query: 283 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 342
+++ID PPGTGD LT+ Q + L AA+IVTTPQ++A +D K V M K++VP IAVVEN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIQLDAAIIVTTPQEVALLDTGKAVNMMKKMEVPYIAVVEN 210
Query: 343 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPI 378
M + G + FG G G ++ ++ G+ L +PI
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAEKEGVDFLGKIPI 248
>sp|Q6CE48|IND1_YARLI Iron-sulfur protein IND1 OS=Yarrowia lipolytica (strain CLIB 122 /
E 150) GN=IND1 PE=1 SV=1
Length = 312
Score = 156 bits (395), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 94/255 (36%), Positives = 145/255 (56%), Gaps = 16/255 (6%)
Query: 134 RANEVVLAIPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVN 193
R++E L IP + ++ P P + PE + + + VSS KGGVGKSTV+VN
Sbjct: 34 RSHENPLGIPK------SPASAPRIPRKTTRRPEPIAGVKKTIVVSSAKGGVGKSTVSVN 87
Query: 194 LAYTLAGMGARVGIFDADVYGPSLPTM--VSPENRLLEMNPEKRTIIPTEYLGVKLVSFG 251
A +LA G RVG+ D D++GPS+PTM +S E R+ + +IP G++++S G
Sbjct: 88 TALSLAKRGLRVGLLDVDIFGPSIPTMFGLSGEPRMTH----EGKLIPMSKFGIQVMSMG 143
Query: 252 F-SGQGRAIM-RGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAV 309
F +A+ RG +V + QLL +WG LD LV+D+PPGTGD+QLT+ Q V + A+
Sbjct: 144 FLVDPNKAVAWRGLLVQKALEQLLQDVDWGTLDVLVMDLPPGTGDVQLTIAQTVKIDGAI 203
Query: 310 IVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQ 367
IV+TPQ +A +DV +G+ +F K + +V+NM F + + FG +
Sbjct: 204 IVSTPQDVALVDVVRGLDLFEKTYTKVLGLVQNMSVFVCPNCNHETHIFGVDGAVSKAKS 263
Query: 368 FGIPHLFDLPIRPTV 382
G+ L ++P+ P +
Sbjct: 264 RGLGVLGNVPLDPQI 278
>sp|P53381|MRP_CLOPE Protein mrp homolog OS=Clostridium perfringens (strain 13 / Type A)
GN=mrp PE=3 SV=2
Length = 284
Score = 156 bits (394), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 91/219 (41%), Positives = 129/219 (58%), Gaps = 12/219 (5%)
Query: 172 ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR---LL 228
I N++ V S KGGVGKSTV LA LA G +VG+ DAD+ GPS+P + ++
Sbjct: 37 IKNVIGVISGKGGVGKSTVTGILATQLAKKGYKVGVLDADITGPSMPRFFGINEKRADIV 96
Query: 229 EMNPEKRTI----IPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGEL 281
M+ E + + + TE LG+K++S + I RGPMV+GV+NQ+ T+W EL
Sbjct: 97 AMDSEGKQVKFVPVKTE-LGIKVISMNLLMEVEDDPVIWRGPMVTGVLNQMFKDTDWEEL 155
Query: 282 DYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
DYL+IDMPPGT DI LT+ Q P+ VIV+TPQ + + V K V M K+ V VVE
Sbjct: 156 DYLLIDMPPGTSDITLTVMQTFPIKELVIVSTPQDMVSMIVKKLVTMAHKMNVCVRGVVE 215
Query: 342 NMCHFDAD-GKRYYPFGRGSGSQVVQQFGIPHLFDLPIR 379
NM + + + GK+ F + S + + G+P + +LPI
Sbjct: 216 NMAYIECECGKKMRVFSKKSSEEHAEYLGLPLIGELPIN 254
>sp|Q68XP6|MRP_RICTY Protein mrp homolog OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=mrp PE=3 SV=1
Length = 318
Score = 155 bits (393), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 93/292 (31%), Positives = 147/292 (50%), Gaps = 37/292 (12%)
Query: 98 SCGFVKDMQINEALGEVSFRLELTTPACPIKDMFEQRANEVVLAIPWVNKVNVTMSAQPA 157
+ GF D+ L RL+ IKD VN + + + +
Sbjct: 37 NIGFSIDISGKNKLEAEEIRLKAINELNNIKD---------------VNNITIVFTQKKT 81
Query: 158 RPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSL 217
A++ ++ + I+ V+S KGGVGKST++ +A L+ +VGI DAD+YGPS+
Sbjct: 82 IDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLENYQVGIVDADIYGPSI 141
Query: 218 PTMVSPENRLLEMNPEKRT----IIPTEYLGVKLVSFGF--SGQGRAIMRGPMVSGVINQ 271
P + +N +T IIP ++++S GF I RGPM S +I Q
Sbjct: 142 P-------HIFGINEIPKTVEGRIIPILAQNIQIISIGFFVKAHSAIIYRGPMASKIIYQ 194
Query: 272 LLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSK 331
LL+ T W LDYL+IDMPPGTGDI L++ + L ++VTTPQK++ IDV + + ++ K
Sbjct: 195 LLSNTRWNNLDYLIIDMPPGTGDIHLSMLENYHLDGVIVVTTPQKISEIDVIRSIDLYRK 254
Query: 332 LKVPCIAVVENMCHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVS 383
L +P + ++ENM Y + +++ IP + +PI P ++
Sbjct: 255 LGLPILGIIENMI---------YMLESDRCGHLSKKYNIPLIAKIPIIPQIA 297
>sp|Q9ZE27|MRP_RICPR Protein mrp homolog OS=Rickettsia prowazekii (strain Madrid E)
GN=mrp PE=3 SV=1
Length = 318
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 137/245 (55%), Gaps = 16/245 (6%)
Query: 142 IPWVNKVNVTMSAQPARPIFAEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGM 201
I VNK+ + + A++ ++ + I+ V+S KGGVGKST++ +A L+
Sbjct: 66 IKEVNKITIVFTQSKTIDKKAQKPKHFVENVKKIILVASGKGGVGKSTISALIAQQLSLE 125
Query: 202 GARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRTIIPTEYLGVKLVSFGF--SGQGRAI 259
RVGI DAD+YGPS+P + + E R I+P ++++S GF I
Sbjct: 126 NYRVGIVDADIYGPSIPHIFGING--IPKTVEGR-IVPILAQNIQIISIGFFVKAHSAII 182
Query: 260 MRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAF 319
RGPM S +I QLL+ T W LDYL+IDMPPGTGDI L++ + L ++VTT QK++
Sbjct: 183 YRGPMASKIIYQLLSNTRWNNLDYLIIDMPPGTGDIHLSIIENYHLDGVIVVTTQQKISE 242
Query: 320 IDVAKGVRMFSKLKVPCIAVVENMCH-FDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPI 378
IDV + + ++ KL +P + ++ENM + ++D Y +++ IP + +PI
Sbjct: 243 IDVIRSIDLYRKLGLPILGIIENMIYMLESDHCGYLS----------KKYHIPLIAQIPI 292
Query: 379 RPTVS 383
P ++
Sbjct: 293 MPQIA 297
>sp|Q8U1R0|Y1145_PYRFU Uncharacterized ATP-binding protein PF1145 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1145 PE=3 SV=1
Length = 295
Score = 154 bits (388), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 130/218 (59%), Gaps = 17/218 (7%)
Query: 176 VAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEK- 234
+AV S KGGVGKSTVAVNL LA MG VGI DAD++GP++ M N ++ EK
Sbjct: 33 IAVLSGKGGVGKSTVAVNLTAALAKMGYFVGILDADIHGPNVAKMFGIGNT--DIYAEKF 90
Query: 235 -----RTIIPT-EYLG----VKLVSFGFS--GQGRAIMRGPMVSGVINQLLTTTEWGELD 282
I PT +++G +K++S G I RG +V+ I QLL WGELD
Sbjct: 91 EDGHFEMIPPTVDFMGQVTPIKVMSMGMMVPEDQPIIWRGSLVTKAIKQLLGDVMWGELD 150
Query: 283 YLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVEN 342
+++ID PPGTGD LT+ Q + L AA++VTTPQ++A +D K V M K++VP IAV+EN
Sbjct: 151 FMIIDFPPGTGDEILTVVQSIQLDAAIVVTTPQEVALLDTGKAVNMMKKMEVPYIAVIEN 210
Query: 343 MCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPI 378
M + G + FG G G ++ ++ G+ L +PI
Sbjct: 211 MSYLICPHCGNKIDIFGEGGGEKLAEKEGVDFLGKVPI 248
>sp|Q8TB37|NUBPL_HUMAN Iron-sulfur protein NUBPL OS=Homo sapiens GN=NUBPL PE=1 SV=3
Length = 319
Score = 153 bits (387), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 92/230 (40%), Positives = 137/230 (59%), Gaps = 16/230 (6%)
Query: 160 IFAEQLPEG--LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGP 215
I + LP+ ++ + ++ V+S KGGVGKST AVNLA LA + +G+ D DVYGP
Sbjct: 52 IMSRGLPKQKPIEGVKQVIVVASGKGGVGKSTTAVNLALALAANDSSKAIGLLDVDVYGP 111
Query: 216 SLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGR--AIMRGPMVSGVIN 270
S+P M++ L+ NPE + P G+ +S GF + + RG MV I
Sbjct: 112 SVPKMMN-----LKGNPELSQSNLMRPLLNYGIACMSMGFLVEESEPVVWRGLMVMSAIE 166
Query: 271 QLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS 330
+LL +WG+LDYLV+DMPPGTGD+QL++ Q +P+T AVIV+TPQ +A +D KG MF
Sbjct: 167 KLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPITGAVIVSTPQDIALMDAHKGAEMFR 226
Query: 331 KLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQFGIPHLFDLPI 378
++ VP + +V+NM F ++ + FG ++ Q G+ L D+P+
Sbjct: 227 RVHVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLGLEVLGDIPL 276
>sp|Q9CWD8|NUBPL_MOUSE Iron-sulfur protein NUBPL OS=Mus musculus GN=Nubpl PE=2 SV=2
Length = 319
Score = 153 bits (386), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 93/234 (39%), Positives = 138/234 (58%), Gaps = 16/234 (6%)
Query: 160 IFAEQLPEG--LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGAR--VGIFDADVYGP 215
I + LP+ ++ + ++ V+S KGGVGKST AVNLA LA + VG+ D DVYGP
Sbjct: 52 IMSRGLPKQKPIEGVREVIVVASGKGGVGKSTTAVNLALALAANDSSKAVGLLDVDVYGP 111
Query: 216 SLPTMVSPENRLLEMNPE---KRTIIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVIN 270
S+P M++ L NPE + P G+ +S GF + A + RG MV I
Sbjct: 112 SIPKMMN-----LRGNPELSPNNLMRPLLNYGIACMSMGFLVEETAPLVWRGLMVMSAIE 166
Query: 271 QLLTTTEWGELDYLVIDMPPGTGDIQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS 330
+LL +WG+LDYLV+DMPPGTGD+QL++ Q +P++ AVIV+TPQ +A +D KG MF
Sbjct: 167 KLLRQVDWGQLDYLVVDMPPGTGDVQLSVSQNIPISGAVIVSTPQDIALMDAHKGAEMFR 226
Query: 331 KLKVPCIAVVENMCHFDADGKRY--YPFGRGSGSQVVQQFGIPHLFDLPIRPTV 382
K+ VP + +V+NM F ++ + FG ++ Q + L D+P+ ++
Sbjct: 227 KVNVPVLGLVQNMSVFQCPKCKHKTHIFGADGARKLAQTLDLDVLGDVPLHLSI 280
>sp|Q6CQV4|CFD1_KLULA Cytosolic Fe-S cluster assembly factor CFD1 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=CFD1 PE=3 SV=1
Length = 283
Score = 144 bits (364), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 130/234 (55%), Gaps = 13/234 (5%)
Query: 165 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE 224
+PE L+ I +I+ V S KGGVGKS+V A TL G +VG+ D D+ GPSLP M E
Sbjct: 10 MPESLKDIKHIILVLSGKGGVGKSSVTTQTALTLCLKGYKVGVLDIDLTGPSLPRMFGLE 69
Query: 225 NRLLEMNPEKRTI---IPTEYLG-VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTE 277
N+ + K I +PT G +KL+S GF R + RGP S +I Q + +
Sbjct: 70 NKQV-YQASKGWIPVSVPTTSGGELKLMSLGFLLDDRGNSVVWRGPKKSAMIKQFIKDVD 128
Query: 278 WGELDYLVIDMPPGTGDIQLTLCQVVPLTA---AVIVTTPQKLAFIDVAKGVRMFSKLKV 334
WG+LDYL+ID PPGT D +++ + + A A+IVTTPQ +A DV K + K+
Sbjct: 129 WGDLDYLIIDTPPGTSDEHISIAEELRWAAPDGAIIVTTPQGVATADVRKEINFCKKVNF 188
Query: 335 PCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYMI 386
+ V+ENM F + F RG G ++ ++ +P+L ++PI PT +I
Sbjct: 189 NILGVIENMSGFICPHCAECTDIFSRGGGFKLASEYNVPYLGNIPIDPTFVELI 242
>sp|A7SE07|NUBP2_NEMVE Cytosolic Fe-S cluster assembly factor NUBP2 homolog
OS=Nematostella vectensis GN=v1g229988 PE=3 SV=1
Length = 270
Score = 140 bits (354), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 130/231 (56%), Gaps = 9/231 (3%)
Query: 165 LPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE 224
+P+GL+ + +I+ V S KGGVGKSTVA L++ L G +VG+ D D+ GPS+P M++ E
Sbjct: 5 VPQGLRSVKHIILVLSGKGGVGKSTVATQLSWALYNQGNKVGLLDIDLCGPSIPRMMNVE 64
Query: 225 NRLLEMNPEKRTII---PTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 280
N + + + P + LGV + F + A++ RGP + +I Q L+ WG+
Sbjct: 65 NNDVHQCSDGWVPVYTGPDQRLGVMSIGFLLHSKEDAVVWRGPKKNAMIKQFLSDVCWGD 124
Query: 281 LDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCI 337
+DYL+ID PPGT D +T+ + + A++VTTPQ +A DV + + K K+P +
Sbjct: 125 IDYLIIDTPPGTSDEHITVVENLKTCHPDGAILVTTPQGVAISDVRREITFCKKTKIPVL 184
Query: 338 AVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYMI 386
+VENM F + F +G G + ++ +P L +P+ P ++ I
Sbjct: 185 GIVENMSGFVCPHCSECTNVFSKGGGEALAKECEVPFLGCIPLDPNLTMNI 235
>sp|Q6FPP7|CFD1_CANGA Cytosolic Fe-S cluster assembly factor CFD1 OS=Candida glabrata
(strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 /
NRRL Y-65) GN=CFD1 PE=3 SV=1
Length = 285
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 125/231 (54%), Gaps = 15/231 (6%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 228
L I +I+ V S KGGVGKS+V A TL GMG VG+ D D+ GPSLP M E+ +
Sbjct: 18 LSLIKHILLVLSGKGGVGKSSVTTQTALTLCGMGYNVGVLDIDLTGPSLPRMFGIEDSSI 77
Query: 229 EMNPEKRTIIPTEYLG---VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELD 282
+ + IP E G + +VS GF R + RGP + +I Q + WGELD
Sbjct: 78 YQSADGWMPIPVETNGKGKLCVVSLGFLLGSRGTSVVWRGPKKTSMIRQFIKDVTWGELD 137
Query: 283 YLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 339
YL+ID PPGT D +++ + + T A++VTTPQ +A DV K + K+ + + V
Sbjct: 138 YLLIDTPPGTSDEHISIAEELRFTNPDGAIVVTTPQGVATADVKKEINFCRKVNLRILGV 197
Query: 340 VENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYMI 386
+ENM C + + F +G G + +QF +P+L ++PI P +I
Sbjct: 198 IENMSGFVCPYCTECTNI--FSKGGGESLAKQFDVPYLGNIPIDPKFVDLI 246
>sp|P40558|CFD1_YEAST Cytosolic Fe-S cluster assembly factor CFD1 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=CFD1 PE=1
SV=1
Length = 293
Score = 140 bits (352), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/229 (36%), Positives = 124/229 (54%), Gaps = 11/229 (4%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 228
L I +I+ + S KGGVGKS+V A TL MG +VG+ D D+ GPSLP M EN +
Sbjct: 13 LAGIKHIILILSGKGGVGKSSVTTQTALTLCSMGFKVGVLDIDLTGPSLPRMFGLENESI 72
Query: 229 EMNPE--KRTIIPTEYLG-VKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELD 282
PE + + T G + ++S GF R I RGP + +I Q ++ WGELD
Sbjct: 73 YQGPEGWQPVKVETNSTGSLSVISLGFLLGDRGNSVIWRGPKKTSMIKQFISDVAWGELD 132
Query: 283 YLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 339
YL+ID PPGT D +++ + + + ++VTTPQ +A DV K + K+ + + +
Sbjct: 133 YLLIDTPPGTSDEHISIAEELRYSKPDGGIVVTTPQSVATADVKKEINFCKKVDLKILGI 192
Query: 340 VENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYMI 386
+ENM F + F G G ++ +QF +P+L ++PI P MI
Sbjct: 193 IENMSGFVCPHCAECTNIFSSGGGKRLSEQFSVPYLGNVPIDPKFVEMI 241
>sp|P65441|MRP_MYCTU Protein mrp homolog OS=Mycobacterium tuberculosis GN=mrp PE=3 SV=1
Length = 381
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 31/336 (9%)
Query: 73 TGTAEND----VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIK 128
+GT + D + AL ++IDP+ I G VK + G V + LT CP K
Sbjct: 2 SGTRDGDLNAAIRTALGKVIDPELRRPITELGMVKSIDTGPD-GSVHVEIYLTIAGCPKK 60
Query: 129 DMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGLQK----------ISNIV 176
+R V +P + V V++ + R +QL ++ ++ +
Sbjct: 61 SEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDTREPVIPFAQPDSLTRVY 120
Query: 177 AVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT 236
AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P M+ +R ++ +
Sbjct: 121 AVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPRMMGTTDRPTQV---ESM 177
Query: 237 IIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 294
I+P VK++S QG + RGPM+ + Q L WG+LD L++D+PPGTGD
Sbjct: 178 ILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGTGD 237
Query: 295 IQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPCIAVVENMCHFDA-DGKR 352
+ +++ Q++P ++VTTPQ LA +VA+ + + + + VVENM DG
Sbjct: 238 VAISVAQLIPNAELLVVTTPQ-LAAAEVAERAGSIALQTRQRIVGVVENMSGLTLPDGTT 296
Query: 353 YYPFGRGSGSQVVQQFG------IPHLFDLPIRPTV 382
FG G G V ++ +P L +P+ P +
Sbjct: 297 MQVFGEGGGRLVAERLSRAVGADVPLLGQIPLDPAL 332
>sp|P65442|MRP_MYCBO Protein mrp homolog OS=Mycobacterium bovis (strain ATCC BAA-935 /
AF2122/97) GN=mrp PE=3 SV=1
Length = 381
Score = 139 bits (350), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 106/336 (31%), Positives = 168/336 (50%), Gaps = 31/336 (9%)
Query: 73 TGTAEND----VLKALSQIIDPDFGTDIVSCGFVKDMQINEALGEVSFRLELTTPACPIK 128
+GT + D + AL ++IDP+ I G VK + G V + LT CP K
Sbjct: 2 SGTRDGDLNAAIRTALGKVIDPELRRPITELGMVKSIDTGPD-GSVHVEIYLTIAGCPKK 60
Query: 129 DMFEQRANEVVLAIPWVNKVNVTMS--AQPARPIFAEQLPEGLQK----------ISNIV 176
+R V +P + V V++ + R +QL ++ ++ +
Sbjct: 61 SEITERVTRAVADVPGTSAVRVSLDVMSDEQRTELRKQLRGDTREPVIPFAQPDSLTRVY 120
Query: 177 AVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLLEMNPEKRT 236
AV+S KGGVGKSTV VNLA +A G +G+ DAD++G S+P M+ +R ++ +
Sbjct: 121 AVASGKGGVGKSTVTVNLAAAMAVRGLSIGVLDADIHGHSIPRMMGTTDRPTQV---ESM 177
Query: 237 IIPTEYLGVKLVSFGFSGQGRA--IMRGPMVSGVINQLLTTTEWGELDYLVIDMPPGTGD 294
I+P VK++S QG + RGPM+ + Q L WG+LD L++D+PPGTGD
Sbjct: 178 ILPPIAHQVKVISIAQFTQGNTPVVWRGPMLHRALQQFLADVYWGDLDVLLLDLPPGTGD 237
Query: 295 IQLTLCQVVPLTAAVIVTTPQKLAFIDVAKGVRMFS-KLKVPCIAVVENMCHFDA-DGKR 352
+ +++ Q++P ++VTTPQ LA +VA+ + + + + VVENM DG
Sbjct: 238 VAISVAQLIPNAELLVVTTPQ-LAAAEVAERAGSIALQTRQRIVGVVENMSGLTLPDGTT 296
Query: 353 YYPFGRGSGSQVVQQFG------IPHLFDLPIRPTV 382
FG G G V ++ +P L +P+ P +
Sbjct: 297 MQVFGEGGGRLVAERLSRAVGADVPLLGQIPLDPAL 332
>sp|Q7QGS3|NUBP2_ANOGA Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Anopheles
gambiae GN=AGAP010873 PE=3 SV=4
Length = 259
Score = 138 bits (348), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 122/226 (53%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 228
L K+ +I+ V S KGGVGKSTV+ LA TLA +VG+ D D+ GPS+P ++ E+R +
Sbjct: 2 LDKVKHIILVLSGKGGVGKSTVSTQLALTLAEADHKVGLLDIDLCGPSVPYLLGLEDRDV 61
Query: 229 EMNPEKRT-IIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 284
E + + + ++S GF + R+ I RGP + +I Q L W ELDYL
Sbjct: 62 HQCDEGWVPVYTSAEKRLAVMSIGFLLKNRSDAVIWRGPKKTAMIKQFLEDVNWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQ---VVPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + V A+IVTTPQ++A DV K V K +P + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLKTVRTEGAIIVTTPQEMALEDVRKEVTFCKKTGIPILGIVE 181
Query: 342 NMCHFDADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F + F G G + + +PHL LPI P V +
Sbjct: 182 NMSGFVCPNCSECTNIFSSGGGHSLAELAKVPHLGTLPIDPRVGEL 227
>sp|Q75AC3|CFD1_ASHGO Cytosolic Fe-S cluster assembly factor CFD1 OS=Ashbya gossypii
(strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL
Y-1056) GN=CFD1 PE=3 SV=2
Length = 281
Score = 138 bits (347), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 90/235 (38%), Positives = 124/235 (52%), Gaps = 16/235 (6%)
Query: 166 PEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPEN 225
PE L++I +IV V S KGGVGKS+V L LA G +VGI D D+ GPSLP MV E
Sbjct: 9 PESLREIEHIVLVLSGKGGVGKSSVTTQLGMALACRGLKVGILDIDLTGPSLPRMVGMEG 68
Query: 226 RLLEMNPEKRTIIPT------EYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTT 276
+ + P R IP E ++++S GF R + RGP + +I Q ++
Sbjct: 69 KSVLQGP--RGWIPVDVPTGMEQGCLRVMSLGFLLDDRGDSVVWRGPKKTAMIKQFISDV 126
Query: 277 EWGELDYLVIDMPPGTGDIQLTLCQVVPLT---AAVIVTTPQKLAFIDVAKGVRMFSKLK 333
WG LDYL+ID PPGT D +++ + + A+IV+TPQK+A DV K + K+
Sbjct: 127 YWGALDYLLIDTPPGTSDEHISIAEELRGARPDGAIIVSTPQKVAVADVKKEINFCRKVN 186
Query: 334 VPCIAVVENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYMI 386
+ VVENM F + F RG G + + G+P L +PI P MI
Sbjct: 187 FKLLGVVENMSGFVCPHCSECTNIFARGGGESLALESGVPFLGTVPIDPAFVEMI 241
>sp|B4IYG8|NUBP2_DROGR Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
grimshawi GN=GH14587 PE=3 SV=1
Length = 264
Score = 137 bits (344), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 121/226 (53%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 227
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPYLLGLEGRDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 284
+ + I E + ++S GF + R I RGP + +I Q L+ +W ELDYL
Sbjct: 62 FQCDDGWVPIYTDESKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIKQFLSDVKWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 342 NMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F + F G+++ +PHL LPI P V +
Sbjct: 182 NMSGFVCPHCTECTNIFSSNGGAELANLAQVPHLGTLPIDPRVGVL 227
>sp|B3M9R3|NUBP2_DROAN Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
ananassae GN=GF10354 PE=3 SV=1
Length = 261
Score = 134 bits (338), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 85/226 (37%), Positives = 120/226 (53%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE-NRL 227
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E + +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRQTGHKVGLLDIDLCGPSVPYLLGLEGSDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 284
+ + I E + ++S GF + R I RGP + +I Q LT +W ELDYL
Sbjct: 62 FQCDEGWVPIYTDESQTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 342 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F F G ++ + IPHL LPI P V +
Sbjct: 182 NMSGFVCPHCTSCTNIFSSNGGVELAKYAQIPHLGTLPIDPRVGVL 227
>sp|Q29DB7|NUBP2_DROPS Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
pseudoobscura pseudoobscura GN=GA18483 PE=3 SV=2
Length = 258
Score = 133 bits (335), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/226 (38%), Positives = 118/226 (52%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 228
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E +
Sbjct: 2 LDKVKNVIIVLSGKGGVGKSTVSTQLALALRHSGHKVGLLDIDLCGPSVPFLLGLEGSNI 61
Query: 229 EMNPEKRTIIPTE-YLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 284
E I T+ + ++S GF + R I RGP + +I Q LT +W ELDYL
Sbjct: 62 YQCDEGWVPIYTDASKTLAVMSIGFLLKNRTDPVIWRGPKKTMMIRQFLTDVKWEELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQSVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 342 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F F G ++ IPHL LPI P V +
Sbjct: 182 NMSGFVCPNCTNCTNIFSSNGGVELAHLVQIPHLGTLPIDPRVGVL 227
>sp|B0XDJ0|NUBP2_CULQU Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Culex
quinquefasciatus GN=CPIJ017390 PE=3 SV=1
Length = 257
Score = 133 bits (334), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 86/228 (37%), Positives = 122/228 (53%), Gaps = 13/228 (5%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 228
L KI +I+ V S KGGVGKSTV+ LA TLA G +VG+ D D+ GPS+P ++ E
Sbjct: 2 LDKIKHIILVLSGKGGVGKSTVSTQLALTLAESGHKVGLLDIDLCGPSVPFLLGLEGH-- 59
Query: 229 EMNPEKRTIIPT-----EYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGELD 282
+++ ++ +P + L V + F + A++ RGP + +I Q L W ELD
Sbjct: 60 DVHQCEQGWVPVFSGADQRLAVMSIGFLLKNRDEAVIWRGPKKTAMIKQFLEDVAWDELD 119
Query: 283 YLVIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAV 339
YLVID PPGT D +T+ + V A+IVTTPQ++A DV K V K + + +
Sbjct: 120 YLVIDTPPGTSDEHITVMECLKGVNADGAIIVTTPQEMALEDVRKEVTFCKKTGIAILGI 179
Query: 340 VENMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
VENM F + F G G + + +PHL LPI P V +
Sbjct: 180 VENMSGFVCPNCAECTKIFSSGGGVALAELAQVPHLGTLPIDPRVGAL 227
>sp|B4KY56|NUBP2_DROMO Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
mojavensis GN=GI13405 PE=3 SV=1
Length = 264
Score = 133 bits (334), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 124/229 (54%), Gaps = 15/229 (6%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 227
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPHLLGLEGRDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 284
+ + I E + ++S GF + R I RGP + +I Q LT +W +LDYL
Sbjct: 62 YQCDDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIKQFLTDVKWEDLDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQGVALDDVRKELTFCKKTGIKVLGIVE 181
Query: 342 NM----CHFDADGKRYY-PFGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM C +D + FG G+++ Q +P L LPI P V +
Sbjct: 182 NMSGFVCPHCSDCTNIFSSFG---GAELAQLAQVPLLGTLPIDPRVGVL 227
>sp|B3RPX4|NUBP2_TRIAD Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Trichoplax
adhaerens GN=TRIADDRAFT_53697 PE=3 SV=1
Length = 265
Score = 132 bits (333), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/233 (36%), Positives = 126/233 (54%), Gaps = 13/233 (5%)
Query: 167 EGLQK----ISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVS 222
EG QK I ++V + S KGGVGKSTVA +A LA G +VGI D D+ GPS+P ++
Sbjct: 4 EGAQKATGKIKSVVLILSGKGGVGKSTVASQIALELANGGNKVGILDVDLCGPSIPRVLG 63
Query: 223 PENRLLEMNPEKRTII---PTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEW 278
E++ + + + E L V + F A++ RGP + +I Q L+ W
Sbjct: 64 LEDKDVHQCADGWIPVYADKNEKLAVMSIGFLLRNSKDAVVWRGPKKNAMIKQFLSDVVW 123
Query: 279 GELDYLVIDMPPGTGDIQLTLCQVV---PLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVP 335
G+LDYL+ID PPGT D +T+ + V LT AV+VTTPQ +A DV + + K+ +P
Sbjct: 124 GDLDYLIIDTPPGTSDEHITVAENVRGLNLTGAVMVTTPQAVALGDVRREITFCKKVGIP 183
Query: 336 CIAVVENMCHFDADG--KRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYMI 386
+ +VENM + + F +G G + Q +P L LP+ P ++ I
Sbjct: 184 IVGIVENMSGYTCPNCSECTNIFSKGGGEALAQLTQVPFLGCLPLDPKLTMSI 236
>sp|B4LGB4|NUBP2_DROVI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
virilis GN=GJ11530 PE=3 SV=1
Length = 266
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 121/226 (53%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENRLL 228
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRATGHKVGLLDIDLCGPSVPYLLGLEGSDI 61
Query: 229 EMNPEKRTIIPT-EYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 284
+ I T E + ++S GF + R I RGP + +I Q LT +W ++DYL
Sbjct: 62 YQCEDGWVPIYTDESKTLAVMSIGFLLKNRNDPVIWRGPKKTMMIRQFLTDVKWEDMDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECMREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 342 NMCHFDAD--GKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F + F G+++ + +PHL LPI P V +
Sbjct: 182 NMSGFVCPHCTECTNIFSSNGGAELARLAQVPHLGTLPIDPRVGVL 227
>sp|B4PES4|NBP22_DROYA Cytosolic Fe-S cluster assembly factor NUBP2 homolog 2
OS=Drosophila yakuba GN=GE19695 PE=3 SV=1
Length = 260
Score = 132 bits (332), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 227
L+K+ NI+ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 284
+ + + E + ++S GF + R I RGP + +I Q LT W ELDYL
Sbjct: 62 FQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + V A+IVTTPQ++A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTSINILGIVE 181
Query: 342 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F F G+ + +PHL LPI P V +
Sbjct: 182 NMSGFVCPHCTSCTNIFSSNGGTSLANYAQVPHLGTLPIDPRVGVL 227
>sp|Q9UT57|CFD1_SCHPO Probable cytosolic Fe-S cluster assembly factor C806.02c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAC806.02c PE=3 SV=1
Length = 608
Score = 132 bits (331), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 84/243 (34%), Positives = 123/243 (50%), Gaps = 27/243 (11%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGA-----RVGIFDADVYGPSLPTMVSP 223
+ K+ +++ V S KGGVGKS+V LA +L + GI D D+ GPS+P M
Sbjct: 1 MDKVQHVILVLSGKGGVGKSSVTTQLALSLHDSKVYSRPLKTGILDIDLTGPSIPRMFGK 60
Query: 224 E---NRLLEMNPEKRTIIPTEYLGVKLVSFGF---SGQGRAIMRGPMVSGVINQLLTTTE 277
+ NR+ + + + E + L+S GF S + RGP + +I Q ++
Sbjct: 61 DAERNRIHQSSAGWVPVYTDETKEIGLMSLGFLLTSKNDSVVWRGPKKAAMIRQFISDVS 120
Query: 278 WGELDYLVIDMPPGTGDIQLTLCQV----------VPLTAAVIVTTPQKLAFIDVAKGVR 327
WGELD+L+ID PPGTGD LT+ + VP+ AVIVTTPQ +A +DV K +
Sbjct: 121 WGELDFLIIDTPPGTGDEHLTIVESLLSETSTVRDVPIDGAVIVTTPQGIATLDVQKEID 180
Query: 328 MFSKLKVPCIAVVENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVS 383
K + + +VENM C AD F G G + +++ +P L +PI P
Sbjct: 181 FCKKASIKILGIVENMSGYICPHCADCTNI--FSSGGGLTLSEKYKLPFLGSVPIDPKFG 238
Query: 384 YMI 386
MI
Sbjct: 239 EMI 241
>sp|B4IUH5|NBP21_DROYA Cytosolic Fe-S cluster assembly factor NUBP2 homolog 1
OS=Drosophila yakuba GN=GE23241 PE=3 SV=1
Length = 260
Score = 131 bits (330), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 227
L+K+ NI+ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 284
+ + + E + ++S GF + R I RGP + +I Q LT W ELDYL
Sbjct: 62 FQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + V A+IVTTPQ++A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVE 181
Query: 342 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F F G+ + +PHL LPI P V +
Sbjct: 182 NMSGFVCPHCTSCTNIFSSNGGASLANYAQVPHLGTLPIDPRVGVL 227
>sp|B3NIP2|NUBP2_DROER Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
erecta GN=GG16127 PE=3 SV=1
Length = 260
Score = 131 bits (330), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 83/226 (36%), Positives = 119/226 (52%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 227
L+K+ NI+ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LEKVKNIIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 284
+ + + E + ++S GF + R I RGP + +I Q LT W ELDYL
Sbjct: 62 FQCDEGWVPVYTDESQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + V A+IVTTPQ++A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVE 181
Query: 342 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F F G+ + +PHL LPI P V +
Sbjct: 182 NMSGFVCPHCTSCTNIFSSNGGASLATYAQVPHLGTLPIDPRVGVL 227
>sp|Q5I0L4|NUBP1_RAT Cytosolic Fe-S cluster assembly factor NUBP1 OS=Rattus norvegicus
GN=Nubp1 PE=2 SV=1
Length = 320
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 127/230 (55%), Gaps = 10/230 (4%)
Query: 163 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMG-ARVGIFDADVYGPSLPTMV 221
E++ E ++ + + + V S KGGVGKST + +LA+ LA G +V + D D+ GPS+P ++
Sbjct: 44 EEIREKMKTVRHRILVLSGKGGVGKSTFSAHLAHGLAEDGDTQVALLDIDICGPSIPKIM 103
Query: 222 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 279
E + + + + E LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVYVEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 280 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 336
++DYLVID PPGT D L++ Q + + AVI+TTPQ++A DV K + K+K+P
Sbjct: 164 DVDYLVIDTPPGTSDEHLSVVQYLAAAHIDGAVILTTPQEVALQDVRKEISFCHKVKLPI 223
Query: 337 IAVVENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTV 382
I VVENM C + +P G + Q IP L +P+ P +
Sbjct: 224 IGVVENMSGFICPKCKRESQIFPPTTGGAEAMCQALKIPLLGKVPLDPHI 273
>sp|B4N4D9|NUBP2_DROWI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
willistoni GN=GK12055 PE=3 SV=1
Length = 261
Score = 131 bits (329), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/226 (37%), Positives = 118/226 (52%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPE-NRL 227
L K+ N++ V S KGGVGKSTV+ LA L G +VG+ D D+ GPS+P ++ E + +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLALALRHTGHKVGLLDIDLCGPSVPYLLGLEGSDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGRA---IMRGPMVSGVINQLLTTTEWGELDYL 284
+ + I E + ++S GF + R I RGP + +I Q L +W ELDYL
Sbjct: 62 YQCDDGWVPIYTDESKTLAVMSIGFLLKSRTDPVIWRGPKKTMMIKQFLQDVKWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + VP A+IVTTPQ +A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLREVPCNGAIIVTTPQGVALDDVRKEITFCKKTGIKLLGIVE 181
Query: 342 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F F G ++ IPHL LPI P V +
Sbjct: 182 NMSGFVCPHCTTCTNIFSSNGGIELANLAQIPHLGTLPIDPRVGIL 227
>sp|Q6C5D0|CFD1_YARLI Cytosolic Fe-S cluster assembly factor CFD1 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=CFD1 PE=3 SV=1
Length = 291
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/237 (35%), Positives = 127/237 (53%), Gaps = 14/237 (5%)
Query: 162 AEQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMV 221
A Q L + NIV V S KGGVGKS+V LA TLA G +VG+ D D+ GPS+P
Sbjct: 5 ATQSSPSLAGVKNIVLVLSGKGGVGKSSVTTQLALTLAAQGKKVGVLDIDLTGPSIPRFF 64
Query: 222 SPENRLLEMNPEKRTIIPTE-YLGVKLVSFGF--SGQGRAIM-RGPMVSGVINQLLTTTE 277
E++ + + + T+ + L+S GF S +G +++ RGP + +I Q +
Sbjct: 65 GMEDKQVYQSSAGWVPVYTDASRNLCLMSLGFLLSSRGDSVVWRGPRKTAMIRQFIRDVV 124
Query: 278 WGELDYLVIDMPPGTGDIQLTLCQVV----PLTAAVIVTTPQKLAFIDVAKGVRMFSKLK 333
WGELDYL+ID PPGT D +++ + + + AVIVTTPQ +A DV K + K+
Sbjct: 125 WGELDYLLIDTPPGTSDEHISIAEELRFCDQILGAVIVTTPQGVALADVRKELSFCKKIG 184
Query: 334 VPCIAVVENM----CHFDADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVSYMI 386
P + ++ENM C ++ + F +G G + +Q+ L +PI P M+
Sbjct: 185 FPILGIIENMSGYVCPHCSECQNI--FSKGGGENLAKQYECKFLGTVPIDPKFVLMV 239
>sp|Q24K00|NUBP1_BOVIN Cytosolic Fe-S cluster assembly factor NUBP1 OS=Bos taurus GN=NUBP1
PE=2 SV=1
Length = 320
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 80/230 (34%), Positives = 126/230 (54%), Gaps = 10/230 (4%)
Query: 163 EQLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMV 221
E++ E ++ + + + V S KGGVGKST + +LA+ LA +V + D D+ GPS+P ++
Sbjct: 44 EEIKEKMKTVKHKILVLSGKGGVGKSTFSAHLAHGLAEDENTQVALLDIDICGPSIPKIM 103
Query: 222 SPENRLLEMNPEKRT-IIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWG 279
E + + + + + LGV V F S A++ RGP +G+I Q L +WG
Sbjct: 104 GLEGEQVHQSGSGWSPVFLEDNLGVMSVGFLLSSPDDAVIWRGPKKNGMIKQFLRDVDWG 163
Query: 280 ELDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPC 336
E+DYL++D PPGT D L++ Q + + AVI+TTPQ+++ DV K + K+K+P
Sbjct: 164 EVDYLIVDTPPGTSDEHLSVVQYLTAAHIDGAVIITTPQEVSLQDVRKEISFCHKVKLPI 223
Query: 337 IAVVENMCHFDA----DGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTV 382
I VVENM F + +P G + Q IP L +P+ P +
Sbjct: 224 IGVVENMSGFICPKCQKESQIFPPTTGGAEAMCQDLKIPLLGKVPLDPRI 273
>sp|Q8T2F3|NUBP1_DICDI Cytosolic Fe-S cluster assembly factor NUBP1 homolog
OS=Dictyostelium discoideum GN=nubp1 PE=3 SV=1
Length = 315
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/231 (35%), Positives = 126/231 (54%), Gaps = 12/231 (5%)
Query: 164 QLPEGLQKISNIVAVSSCKGGVGKSTVAVNLAYTLA-GMGARVGIFDADVYGPSLPTMVS 222
++ E ++ + N + V S KGGVGKST + L++ L+ VG+ D D+ GPS+P ++
Sbjct: 49 EIEERMKTVKNKILVLSGKGGVGKSTFSSQLSFALSMDEKVEVGLLDIDICGPSIPKIMG 108
Query: 223 PENRLLEMNPEK-RTIIPTEYLGVKLVSFGFSGQGRAIM-RGPMVSGVINQLLTTTEWGE 280
E + ++ + + + L V V F + A++ RGP +G+I Q L W +
Sbjct: 109 LEGENIHISGQGWDPVYVQDNLAVMSVGFLLEKEEDAVIWRGPKKNGIIKQFLKDVYWND 168
Query: 281 LDYLVIDMPPGTGDIQLTLCQVVP---LTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCI 337
LDYLVID PPGT D L++ Q + L+ AVIVT+PQ +A IDV K + K+ VP I
Sbjct: 169 LDYLVIDTPPGTSDEHLSIVQYLKTSNLSGAVIVTSPQDVALIDVRKEINFCKKVGVPII 228
Query: 338 AVVENMCHF-----DADGKRYYPFGRGSGSQVVQQFGIPHLFDLPIRPTVS 383
VVENM F + + + + P G ++ Q +P L +PI P ++
Sbjct: 229 GVVENMSGFVCPKCNKESQIFIPT-TGGAEKMSQDMNVPFLGRIPIDPLIA 278
>sp|B4QJ46|NUBP2_DROSI Cytosolic Fe-S cluster assembly factor NUBP2 homolog OS=Drosophila
simulans GN=GD14899 PE=3 SV=1
Length = 260
Score = 130 bits (327), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 118/226 (52%), Gaps = 9/226 (3%)
Query: 169 LQKISNIVAVSSCKGGVGKSTVAVNLAYTLAGMGARVGIFDADVYGPSLPTMVSPENR-L 227
L K+ N++ V S KGGVGKSTV+ L+ L G +VG+ D D+ GPS+P ++ E R +
Sbjct: 2 LDKVKNVIVVLSGKGGVGKSTVSTQLSLALRKNGFKVGLLDIDLCGPSVPYLLGLEGRDI 61
Query: 228 LEMNPEKRTIIPTEYLGVKLVSFGFSGQGR---AIMRGPMVSGVINQLLTTTEWGELDYL 284
+ + + E+ + ++S GF + R I RGP + +I Q LT W ELDYL
Sbjct: 62 FQCDEGWVPVYTDEFQTLAVMSIGFLLKNREDPVIWRGPKKTMMIRQFLTDVRWDELDYL 121
Query: 285 VIDMPPGTGDIQLTLCQV---VPLTAAVIVTTPQKLAFIDVAKGVRMFSKLKVPCIAVVE 341
+ID PPGT D +T+ + V A+IVTTPQ++A DV K + K + + +VE
Sbjct: 122 IIDTPPGTSDEHITVMECLKEVGCHGAIIVTTPQEVALDDVRKEITFCKKTGINILGIVE 181
Query: 342 NMCHFDADGKRYYP--FGRGSGSQVVQQFGIPHLFDLPIRPTVSYM 385
NM F F G + +PHL LPI P V +
Sbjct: 182 NMSGFVCPHCTSCTNIFSSNGGVSLATYAQVPHLGTLPIDPRVGVL 227
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 145,830,679
Number of Sequences: 539616
Number of extensions: 6103882
Number of successful extensions: 15837
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 200
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 15256
Number of HSP's gapped (non-prelim): 267
length of query: 386
length of database: 191,569,459
effective HSP length: 119
effective length of query: 267
effective length of database: 127,355,155
effective search space: 34003826385
effective search space used: 34003826385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)