Query 016624
Match_columns 386
No_of_seqs 249 out of 1576
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 16:42:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016624.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016624hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2kiz_A E3 ubiquitin-protein li 99.4 5.2E-13 1.8E-17 101.5 6.1 55 28-82 10-64 (69)
2 2l0b_A E3 ubiquitin-protein li 99.4 4.2E-13 1.4E-17 108.3 4.9 53 29-81 37-89 (91)
3 2ect_A Ring finger protein 126 99.4 3.7E-13 1.3E-17 104.7 4.4 54 30-83 13-66 (78)
4 2ep4_A Ring finger protein 24; 99.3 9.8E-13 3.3E-17 101.4 5.9 53 30-82 13-65 (74)
5 1iym_A EL5; ring-H2 finger, ub 99.3 6.2E-13 2.1E-17 96.7 3.8 50 31-80 4-54 (55)
6 1x4j_A Ring finger protein 38; 99.3 6.5E-13 2.2E-17 102.9 3.7 53 29-81 20-72 (75)
7 2djb_A Polycomb group ring fin 99.3 1.4E-12 4.7E-17 100.4 5.0 52 31-84 14-65 (72)
8 1t1h_A Gspef-atpub14, armadill 99.3 1.8E-12 6E-17 100.9 4.8 61 30-93 6-67 (78)
9 3ng2_A RNF4, snurf, ring finge 99.3 1.4E-12 4.8E-17 99.2 4.1 57 28-84 6-66 (71)
10 3lrq_A E3 ubiquitin-protein li 99.3 8.2E-13 2.8E-17 108.4 2.7 61 32-94 22-83 (100)
11 2ecm_A Ring finger and CHY zin 99.3 3.3E-12 1.1E-16 92.7 4.6 51 30-80 3-54 (55)
12 2y43_A E3 ubiquitin-protein li 99.3 2.3E-12 8E-17 104.8 3.9 61 32-94 22-82 (99)
13 2csy_A Zinc finger protein 183 99.3 7.3E-12 2.5E-16 98.3 6.6 49 29-80 12-60 (81)
14 1v87_A Deltex protein 2; ring- 99.3 5.2E-12 1.8E-16 105.0 6.0 54 29-82 22-95 (114)
15 2ea6_A Ring finger protein 4; 99.2 5E-12 1.7E-16 95.3 5.0 52 30-81 13-68 (69)
16 2ecl_A Ring-box protein 2; RNF 99.2 5.5E-12 1.9E-16 99.9 4.1 53 30-82 13-77 (81)
17 1chc_A Equine herpes virus-1 r 99.2 5.9E-12 2E-16 95.3 4.0 49 31-81 4-52 (68)
18 2d8t_A Dactylidin, ring finger 99.2 5.9E-12 2E-16 96.6 4.0 50 29-81 12-61 (71)
19 2xeu_A Ring finger protein 4; 99.2 5.5E-12 1.9E-16 93.7 3.7 54 31-84 2-59 (64)
20 2ckl_A Polycomb group ring fin 99.2 8.2E-12 2.8E-16 103.3 5.1 50 31-82 14-63 (108)
21 3ztg_A E3 ubiquitin-protein li 99.2 1.1E-11 3.8E-16 99.2 5.7 61 31-94 12-76 (92)
22 4ayc_A E3 ubiquitin-protein li 99.2 3.9E-12 1.3E-16 110.0 3.1 49 32-83 53-101 (138)
23 3fl2_A E3 ubiquitin-protein li 99.2 9.2E-12 3.1E-16 105.4 5.1 60 32-94 52-113 (124)
24 2ysl_A Tripartite motif-contai 99.2 1.1E-11 3.7E-16 94.9 5.0 50 31-83 19-71 (73)
25 2ct2_A Tripartite motif protei 99.2 1.3E-11 4.5E-16 97.4 5.6 53 31-83 14-70 (88)
26 2kr4_A Ubiquitin conjugation f 99.2 1.8E-11 6.2E-16 98.0 5.4 61 31-94 13-73 (85)
27 2ecy_A TNF receptor-associated 99.2 1.5E-11 5E-16 93.0 4.5 50 31-83 14-64 (66)
28 2yur_A Retinoblastoma-binding 99.2 1.6E-11 5.5E-16 95.1 4.8 50 31-83 14-66 (74)
29 2ecw_A Tripartite motif-contai 99.2 1.8E-11 6.1E-16 95.6 4.5 50 31-83 18-73 (85)
30 2kre_A Ubiquitin conjugation f 99.2 3.4E-11 1.2E-15 99.5 6.3 63 31-96 28-90 (100)
31 1wgm_A Ubiquitin conjugation f 99.2 3E-11 1E-15 99.5 5.7 63 31-96 21-84 (98)
32 3dpl_R Ring-box protein 1; ubi 99.2 2E-11 6.8E-16 102.2 4.6 52 30-81 35-101 (106)
33 1z6u_A NP95-like ring finger p 99.1 4E-11 1.4E-15 105.7 6.2 62 31-95 77-140 (150)
34 2ecn_A Ring finger protein 141 99.1 9.4E-12 3.2E-16 94.8 1.7 50 30-83 13-62 (70)
35 2ecv_A Tripartite motif-contai 99.1 2.3E-11 8E-16 94.9 4.0 50 31-83 18-73 (85)
36 2egp_A Tripartite motif-contai 99.1 7.9E-12 2.7E-16 96.9 1.1 50 31-83 11-67 (79)
37 2ckl_B Ubiquitin ligase protei 99.1 2.2E-11 7.6E-16 107.9 3.8 61 32-94 54-116 (165)
38 2ysj_A Tripartite motif-contai 99.1 8.1E-11 2.8E-15 87.9 4.7 42 31-75 19-63 (63)
39 1g25_A CDK-activating kinase a 99.1 8E-11 2.7E-15 88.6 3.8 54 31-84 2-58 (65)
40 1jm7_A BRCA1, breast cancer ty 99.0 3.3E-11 1.1E-15 99.4 1.6 50 32-84 21-73 (112)
41 3hct_A TNF receptor-associated 99.0 9.1E-11 3.1E-15 98.7 4.3 62 31-95 17-79 (118)
42 1jm7_B BARD1, BRCA1-associated 99.0 5.6E-11 1.9E-15 99.8 2.3 58 32-93 22-79 (117)
43 4ap4_A E3 ubiquitin ligase RNF 99.0 1E-10 3.5E-15 98.2 3.7 55 30-84 5-63 (133)
44 3l11_A E3 ubiquitin-protein li 99.0 4.8E-11 1.7E-15 99.5 0.8 49 30-81 13-62 (115)
45 4a0k_B E3 ubiquitin-protein li 99.0 4.5E-11 1.5E-15 101.9 0.5 53 30-82 46-113 (117)
46 2yu4_A E3 SUMO-protein ligase 99.0 2.5E-10 8.4E-15 92.8 4.8 63 31-96 6-78 (94)
47 2c2l_A CHIP, carboxy terminus 99.0 2E-10 6.9E-15 107.8 4.8 64 29-95 205-269 (281)
48 2ecj_A Tripartite motif-contai 99.0 2E-10 6.9E-15 83.8 3.4 42 31-75 14-58 (58)
49 2d8s_A Cellular modulator of i 99.0 2.8E-10 9.7E-15 90.6 4.0 54 28-82 11-71 (80)
50 1rmd_A RAG1; V(D)J recombinati 99.0 1.5E-10 5E-15 96.7 2.3 50 32-84 23-73 (116)
51 1e4u_A Transcriptional repress 98.9 5E-10 1.7E-14 88.6 4.5 53 30-83 9-64 (78)
52 4ap4_A E3 ubiquitin ligase RNF 98.9 2.9E-10 1E-14 95.4 2.3 57 28-84 68-128 (133)
53 3knv_A TNF receptor-associated 98.9 5.4E-10 1.9E-14 97.5 2.3 48 31-81 30-78 (141)
54 2f42_A STIP1 homology and U-bo 98.9 1.6E-09 5.5E-14 98.6 5.3 64 30-96 104-168 (179)
55 1bor_A Transcription factor PM 98.8 5.8E-10 2E-14 82.2 1.5 49 29-83 3-51 (56)
56 2vje_A E3 ubiquitin-protein li 98.8 2.1E-09 7.2E-14 81.5 4.0 48 30-80 6-56 (64)
57 3htk_C E3 SUMO-protein ligase 98.8 1.4E-09 4.7E-14 104.4 3.3 61 32-94 181-245 (267)
58 3hcs_A TNF receptor-associated 98.8 2.1E-09 7.2E-14 95.4 4.3 61 31-94 17-78 (170)
59 2ct0_A Non-SMC element 1 homol 98.8 4.5E-09 1.5E-13 82.7 5.2 50 32-83 15-66 (74)
60 2y1n_A E3 ubiquitin-protein li 98.7 4.8E-09 1.6E-13 105.7 5.0 48 32-82 332-380 (389)
61 4ic3_A E3 ubiquitin-protein li 98.7 1.8E-09 6.3E-14 83.8 1.3 43 32-81 24-67 (74)
62 2vje_B MDM4 protein; proto-onc 98.7 4.8E-09 1.6E-13 79.3 3.6 48 30-80 5-55 (63)
63 2ecg_A Baculoviral IAP repeat- 98.6 1.3E-08 4.4E-13 79.0 1.6 44 32-82 25-69 (75)
64 2ea5_A Cell growth regulator w 98.5 7E-08 2.4E-12 74.1 4.0 47 28-81 11-58 (68)
65 2bay_A PRE-mRNA splicing facto 98.5 4.5E-08 1.5E-12 73.9 2.5 51 32-85 3-54 (61)
66 1wim_A KIAA0161 protein; ring 98.5 5.8E-08 2E-12 78.3 2.7 48 31-78 4-61 (94)
67 2yho_A E3 ubiquitin-protein li 98.4 3.8E-08 1.3E-12 77.7 1.2 43 32-81 18-61 (79)
68 3k1l_B Fancl; UBC, ring, RWD, 98.3 9.8E-08 3.3E-12 94.7 1.5 53 29-81 305-373 (381)
69 1vyx_A ORF K3, K3RING; zinc-bi 98.3 4.8E-07 1.7E-11 68.0 4.4 51 28-81 2-59 (60)
70 3t6p_A Baculoviral IAP repeat- 98.3 1.2E-07 4E-12 94.3 0.9 43 32-81 295-338 (345)
71 3vk6_A E3 ubiquitin-protein li 97.9 4.8E-06 1.6E-10 68.9 3.5 46 34-81 3-49 (101)
72 3nw0_A Non-structural maintena 97.5 7.4E-05 2.5E-09 70.5 4.5 50 32-83 180-231 (238)
73 2ko5_A Ring finger protein Z; 95.5 0.0052 1.8E-07 50.3 2.0 47 32-82 28-74 (99)
74 2jun_A Midline-1; B-BOX, TRIM, 95.2 0.012 3.9E-07 47.3 3.3 35 31-66 2-37 (101)
75 2lri_C Autoimmune regulator; Z 91.9 0.12 4.1E-06 39.3 3.4 54 23-79 3-60 (66)
76 3m62_A Ubiquitin conjugation f 91.1 0.18 6.2E-06 55.9 5.2 61 30-93 889-950 (968)
77 3i2d_A E3 SUMO-protein ligase 88.3 0.34 1.2E-05 48.4 4.2 61 32-94 249-313 (371)
78 4fo9_A E3 SUMO-protein ligase 87.2 0.48 1.6E-05 47.2 4.4 61 32-94 215-279 (360)
79 2l5u_A Chromodomain-helicase-D 84.0 0.46 1.6E-05 35.2 1.9 50 25-77 4-57 (61)
80 2cs3_A Protein C14ORF4, MY039 82.1 1.7 5.7E-05 34.6 4.5 40 29-68 12-52 (93)
81 1weo_A Cellulose synthase, cat 80.4 2.8 9.5E-05 33.9 5.3 54 27-80 11-69 (93)
82 1we9_A PHD finger family prote 79.7 0.27 9.1E-06 36.5 -0.8 50 29-78 3-58 (64)
83 3o36_A Transcription intermedi 77.9 0.46 1.6E-05 42.3 0.1 47 30-79 2-52 (184)
84 1fp0_A KAP-1 corepressor; PHD 76.2 0.99 3.4E-05 36.2 1.6 52 25-79 18-73 (88)
85 2k16_A Transcription initiatio 75.6 0.63 2.1E-05 35.5 0.3 50 30-80 16-70 (75)
86 1xwh_A Autoimmune regulator; P 75.5 0.37 1.3E-05 36.2 -1.1 50 26-78 2-55 (66)
87 2lbm_A Transcriptional regulat 75.1 2.5 8.6E-05 36.7 4.0 46 29-77 60-116 (142)
88 3u5n_A E3 ubiquitin-protein li 74.8 0.4 1.4E-05 43.6 -1.2 49 28-79 3-55 (207)
89 1mm2_A MI2-beta; PHD, zinc fin 74.6 0.61 2.1E-05 34.5 -0.0 48 28-78 5-56 (61)
90 2ysm_A Myeloid/lymphoid or mix 71.1 1.1 3.9E-05 36.5 0.8 49 28-76 3-55 (111)
91 1wil_A KIAA1045 protein; ring 67.8 3.6 0.00012 33.0 3.0 34 31-65 14-47 (89)
92 1wem_A Death associated transc 67.3 1.5 5E-05 33.6 0.6 49 29-78 13-70 (76)
93 1f62_A Transcription factor WS 65.0 3 0.0001 29.2 1.9 44 34-77 2-49 (51)
94 2yql_A PHD finger protein 21A; 64.9 0.54 1.8E-05 34.1 -2.2 45 29-76 6-54 (56)
95 1wep_A PHF8; structural genomi 64.3 4.1 0.00014 31.3 2.7 49 30-79 10-64 (79)
96 2ri7_A Nucleosome-remodeling f 63.6 1.5 5E-05 38.4 -0.0 51 26-77 2-58 (174)
97 2lv9_A Histone-lysine N-methyl 63.6 2 6.9E-05 34.6 0.8 45 32-77 28-75 (98)
98 1wew_A DNA-binding family prot 63.5 1.6 5.5E-05 33.7 0.2 53 24-78 8-72 (78)
99 1weu_A Inhibitor of growth fam 62.7 3.7 0.00013 33.0 2.3 53 25-79 29-86 (91)
100 3lqh_A Histone-lysine N-methyl 62.6 1.9 6.6E-05 38.8 0.6 48 33-80 3-65 (183)
101 2puy_A PHD finger protein 21A; 59.0 1.1 3.8E-05 32.8 -1.4 47 29-78 2-52 (60)
102 2d8v_A Zinc finger FYVE domain 58.6 5.5 0.00019 30.4 2.4 34 28-65 4-38 (67)
103 1z60_A TFIIH basal transcripti 58.5 3.4 0.00012 30.7 1.2 43 33-75 16-58 (59)
104 1wen_A Inhibitor of growth fam 54.4 5.6 0.00019 30.3 1.9 49 26-79 10-66 (71)
105 2pv0_B DNA (cytosine-5)-methyl 54.0 9.8 0.00033 38.1 4.0 65 11-78 72-148 (386)
106 2ro1_A Transcription intermedi 53.6 2.6 9E-05 37.8 -0.1 44 32-78 2-49 (189)
107 2vpb_A Hpygo1, pygopus homolog 53.4 9.5 0.00032 28.5 3.0 35 29-63 5-41 (65)
108 3ql9_A Transcriptional regulat 50.0 12 0.0004 32.0 3.4 46 29-77 54-110 (129)
109 2e6r_A Jumonji/ARID domain-con 49.3 1.3 4.3E-05 35.5 -2.7 50 28-77 12-65 (92)
110 1z2q_A LM5-1; membrane protein 48.8 9.7 0.00033 29.6 2.5 37 28-64 17-54 (84)
111 1joc_A EEA1, early endosomal a 48.3 8.4 0.00029 32.3 2.2 37 28-64 65-102 (125)
112 3t7l_A Zinc finger FYVE domain 46.0 10 0.00034 30.0 2.2 38 28-65 16-54 (90)
113 2jmo_A Parkin; IBR, E3 ligase, 45.3 3.3 0.00011 32.1 -0.8 36 32-67 25-70 (80)
114 1x4u_A Zinc finger, FYVE domai 45.3 10 0.00035 29.4 2.1 35 28-62 10-45 (84)
115 2yw8_A RUN and FYVE domain-con 45.3 9.9 0.00034 29.4 2.0 37 28-64 15-52 (82)
116 3v43_A Histone acetyltransfera 44.7 26 0.00088 28.5 4.6 32 32-63 5-42 (112)
117 1zbd_B Rabphilin-3A; G protein 43.8 7.8 0.00027 33.1 1.3 34 30-63 53-88 (134)
118 2zet_C Melanophilin; complex, 43.5 11 0.00037 33.0 2.2 47 31-78 67-117 (153)
119 2l43_A N-teminal domain from h 42.5 3.6 0.00012 32.6 -0.9 55 29-83 22-80 (88)
120 2kgg_A Histone demethylase jar 42.3 7.7 0.00026 27.4 0.9 43 34-76 4-52 (52)
121 3mpx_A FYVE, rhogef and PH dom 41.8 5.5 0.00019 39.2 0.0 51 29-79 372-430 (434)
122 3o70_A PHD finger protein 13; 40.6 3.2 0.00011 31.4 -1.5 48 28-77 15-66 (68)
123 4gne_A Histone-lysine N-methyl 39.2 10 0.00034 31.3 1.2 52 25-82 8-66 (107)
124 1y02_A CARP2, FYVE-ring finger 39.2 2.1 7.1E-05 36.2 -3.0 51 28-78 15-66 (120)
125 3a1b_A DNA (cytosine-5)-methyl 38.8 15 0.00052 32.4 2.4 47 28-77 75-133 (159)
126 1wd2_A Ariadne-1 protein homol 37.9 3.8 0.00013 30.2 -1.4 38 32-69 6-48 (60)
127 1dvp_A HRS, hepatocyte growth 37.8 12 0.0004 34.0 1.6 33 32-64 161-194 (220)
128 2yt5_A Metal-response element- 36.7 9.7 0.00033 27.9 0.7 51 29-79 3-62 (66)
129 3zyq_A Hepatocyte growth facto 35.8 13 0.00044 34.1 1.5 33 32-64 164-197 (226)
130 2ku3_A Bromodomain-containing 33.7 29 0.001 26.2 3.0 51 27-77 11-65 (71)
131 2ct7_A Ring finger protein 31; 33.4 4.9 0.00017 31.4 -1.5 33 35-67 28-63 (86)
132 1wfk_A Zinc finger, FYVE domai 33.1 19 0.00066 28.3 1.9 33 32-64 9-42 (88)
133 2xb1_A Pygopus homolog 2, B-ce 32.6 17 0.00058 29.5 1.6 47 32-78 3-61 (105)
134 3v43_A Histone acetyltransfera 32.4 10 0.00036 30.9 0.3 44 34-77 63-111 (112)
135 1vfy_A Phosphatidylinositol-3- 32.2 21 0.00072 26.8 2.0 32 32-63 11-43 (73)
136 2o35_A Hypothetical protein DU 29.6 20 0.00069 29.4 1.5 13 56-68 42-54 (105)
137 3fyb_A Protein of unknown func 29.2 21 0.0007 29.3 1.5 12 56-67 41-52 (104)
138 2vnf_A ING 4, P29ING4, inhibit 28.9 5.7 0.00019 29.1 -1.8 46 27-77 5-58 (60)
139 1m3v_A FLIN4, fusion of the LI 28.7 32 0.0011 27.9 2.7 51 33-83 33-83 (122)
140 2gmg_A Hypothetical protein PF 27.7 15 0.0005 30.4 0.4 31 46-81 66-96 (105)
141 3c6w_A P28ING5, inhibitor of g 27.2 6.7 0.00023 28.7 -1.6 45 28-77 5-57 (59)
142 2xjy_A Rhombotin-2; oncoprotei 26.6 46 0.0016 26.9 3.3 50 32-81 29-78 (131)
143 3ask_A E3 ubiquitin-protein li 26.3 12 0.0004 34.9 -0.5 45 33-77 175-224 (226)
144 3lt7_A Adhesin YADA; adhesion, 24.0 5.6 0.00019 30.1 -2.5 17 312-328 44-60 (64)
145 2e6s_A E3 ubiquitin-protein li 23.4 14 0.00049 28.4 -0.5 46 32-77 26-76 (77)
146 2kwj_A Zinc finger protein DPF 22.8 37 0.0013 27.6 2.0 33 33-65 2-41 (114)
147 3asl_A E3 ubiquitin-protein li 22.3 11 0.00036 28.5 -1.4 27 51-77 37-68 (70)
148 2a20_A Regulating synaptic mem 22.1 49 0.0017 24.7 2.2 37 30-66 7-44 (62)
149 2xqn_T Testin, TESS; metal-bin 21.7 99 0.0034 24.7 4.4 47 32-82 30-76 (126)
150 2k4b_A Transcriptional regulat 21.6 12 0.00042 29.9 -1.2 31 306-336 50-81 (99)
151 2jne_A Hypothetical protein YF 21.2 6.8 0.00023 32.1 -2.8 41 32-80 32-72 (101)
152 2fiy_A Protein FDHE homolog; F 21.0 7.6 0.00026 37.7 -3.0 48 30-78 180-231 (309)
153 2jrp_A Putative cytoplasmic pr 21.0 6.4 0.00022 31.1 -2.9 40 33-80 3-42 (81)
154 2ffw_A Midline-1; B-BOX, ring 20.8 1.1E+02 0.0038 23.1 4.2 36 29-64 27-62 (78)
155 3shb_A E3 ubiquitin-protein li 20.6 11 0.00037 29.2 -1.6 27 51-77 45-76 (77)
No 1
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=99.37 E-value=5.2e-13 Score=101.55 Aligned_cols=55 Identities=29% Similarity=0.765 Sum_probs=48.0
Q ss_pred CCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
....+..|+||++.|.....+.+++|+|.||..||..|+..+..||+||..|...
T Consensus 10 ~~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~ 64 (69)
T 2kiz_A 10 EEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIEAQ 64 (69)
T ss_dssp STTCCCSBTTTTBCCCSSSCEEECTTSCEEEHHHHHHHHHHCSBCTTTCSBSCSC
T ss_pred cCCCCCCCeeCCccccCCCcEEEeCCCCHHHHHHHHHHHHcCCCCcCcCccccCc
Confidence 3445788999999997666788899999999999999999999999999998754
No 2
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=99.36 E-value=4.2e-13 Score=108.34 Aligned_cols=53 Identities=34% Similarity=0.731 Sum_probs=46.6
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
...+..|+||++.|..++.+..++|+|.||..||..|+..+..||+||..+..
T Consensus 37 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh~~Ci~~wl~~~~~CP~Cr~~~~~ 89 (91)
T 2l0b_A 37 VGQEMCCPICCSEYVKGDVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 89 (91)
T ss_dssp SSSCSEETTTTEECCTTCEEEEETTTEEEEHHHHHHHHTTTCBCTTTCCBSSC
T ss_pred cCCCCCCcccChhhcCCCcEEecCCCChHHHHHHHHHHHcCCcCcCcCccCCC
Confidence 34577899999999776667788999999999999999999999999998764
No 3
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=99.36 E-value=3.7e-13 Score=104.73 Aligned_cols=54 Identities=22% Similarity=0.764 Sum_probs=47.5
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCC
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKD 83 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d 83 (386)
..+..|+||++.|.....+.+++|+|.||..||..|++.+..||+||..+...+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 66 (78)
T 2ect_A 13 GSGLECPVCKEDYALGESVRQLPCNHLFHDSCIVPWLEQHDSCPVCRKSLTGQN 66 (78)
T ss_dssp SSSCCCTTTTSCCCTTSCEEECTTSCEEETTTTHHHHTTTCSCTTTCCCCCCSC
T ss_pred CCCCCCeeCCccccCCCCEEEeCCCCeecHHHHHHHHHcCCcCcCcCCccCCcc
Confidence 347899999999966566677899999999999999999999999999988765
No 4
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.34 E-value=9.8e-13 Score=101.35 Aligned_cols=53 Identities=32% Similarity=0.905 Sum_probs=46.5
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
..+..|+||++.|.......+++|+|.||..||..|++.+..||+||..+...
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~C~H~f~~~Ci~~~~~~~~~CP~Cr~~~~~~ 65 (74)
T 2ep4_A 13 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWLEVRKVCPLCNMPVLQL 65 (74)
T ss_dssp CCSCBCSSSCCBCCSSSCEEEETTTEEEEHHHHHHHHHHCSBCTTTCCBCSSC
T ss_pred CCCCCCcCCCcccCCCCcEEEcCCCCEecHHHHHHHHHcCCcCCCcCcccccc
Confidence 44789999999997666677789999999999999999999999999988653
No 5
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=99.33 E-value=6.2e-13 Score=96.66 Aligned_cols=50 Identities=30% Similarity=0.802 Sum_probs=44.1
Q ss_pred CCcccccccccccCCCCeeecc-cCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016624 31 CDDACSICLEEFSESDPSTVTS-CKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlp-CgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
++..|+||++.|..++.+..++ |+|.||..||..|++.+..||+||+.+.
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~~~Ci~~w~~~~~~CP~Cr~~~~ 54 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCcCccCCccccCCCceEECCCCCCcccHHHHHHHHHcCCcCcCCCCEeE
Confidence 4789999999997666667676 9999999999999999999999999874
No 6
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.32 E-value=6.5e-13 Score=102.90 Aligned_cols=53 Identities=30% Similarity=0.767 Sum_probs=46.4
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
..++..|+||++.|...+.+..++|+|.||..||..|++.+..||+||+.+..
T Consensus 20 ~~~~~~C~IC~~~~~~~~~~~~l~C~H~fh~~Ci~~w~~~~~~CP~Cr~~~~~ 72 (75)
T 1x4j_A 20 QSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICRADSGP 72 (75)
T ss_dssp SSSCCEETTTTEECCBTCEEEEETTTEEEETTHHHHHHHHCSSCTTTCCCCCC
T ss_pred cCCCCCCeECCcccCCCCeEEEECCCCHhHHHHHHHHHHcCCcCcCcCCcCCC
Confidence 34578999999999766666778999999999999999999999999998865
No 7
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.31 E-value=1.4e-12 Score=100.44 Aligned_cols=52 Identities=29% Similarity=0.562 Sum_probs=45.1
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCc
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDA 84 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~ 84 (386)
++..|+||++.| .+++.+++|+|.||..||..|++....||+||..+...++
T Consensus 14 ~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 65 (72)
T 2djb_A 14 PYILCSICKGYL--IDATTITECLHTFCKSCIVRHFYYSNRCPKCNIVVHQTQP 65 (72)
T ss_dssp GGGSCTTTSSCC--SSCEECSSSCCEECHHHHHHHHHHCSSCTTTCCCCCSSCS
T ss_pred CCCCCCCCChHH--HCcCEECCCCCHHHHHHHHHHHHcCCcCCCcCcccCcccc
Confidence 478999999999 4455556999999999999999999999999999887654
No 8
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=99.29 E-value=1.8e-12 Score=100.87 Aligned_cols=61 Identities=18% Similarity=0.362 Sum_probs=49.3
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCCCCcchHHHHHHH
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISLKDATSQELLEAV 93 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d~~~~~lle~v 93 (386)
.++..|+||++.|. + +++++|||.||..||..|+.. ...||+||..+...++..+..+..+
T Consensus 6 ~~~~~C~IC~~~~~--~-Pv~~~CgH~fc~~Ci~~~~~~~~~~CP~C~~~~~~~~l~~n~~l~~~ 67 (78)
T 1t1h_A 6 PEYFRCPISLELMK--D-PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSL 67 (78)
T ss_dssp SSSSSCTTTSCCCS--S-EEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHH
T ss_pred cccCCCCCcccccc--C-CEEcCCCCeecHHHHHHHHHHCcCCCCCCcCCCChhhCccCHHHHHH
Confidence 45889999999993 3 566799999999999999987 7789999999987766655444433
No 9
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=99.29 E-value=1.4e-12 Score=99.22 Aligned_cols=57 Identities=30% Similarity=0.610 Sum_probs=47.9
Q ss_pred CCCCCcccccccccccCC----CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCc
Q 016624 28 QDSCDDACSICLEEFSES----DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDA 84 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~----d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~ 84 (386)
..+++..|+||++.|.+. ..+.+++|+|.||..||..|+..+..||+||..+...+.
T Consensus 6 ~~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 66 (71)
T 3ng2_A 6 RPSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 66 (71)
T ss_dssp CCTTCCBCTTTCCBHHHHHTTTCCEEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCCCSC
T ss_pred CCCCCCCCcccChhhhccccccCCeEeCCCCChHhHHHHHHHHHcCCCCCCCCCccChhhe
Confidence 455688999999998541 334778999999999999999999999999999887654
No 10
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=99.29 E-value=8.2e-13 Score=108.39 Aligned_cols=61 Identities=26% Similarity=0.648 Sum_probs=49.4
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcC-CCCCCCcccCCCCCcchHHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS-SQCPMCWQPISLKDATSQELLEAVE 94 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~-~sCP~CR~~i~~~d~~~~~lle~ve 94 (386)
+..|+||++.| .+++.+++|+|.||..||..|+... ..||+||..+...++.....+..+.
T Consensus 22 ~~~C~IC~~~~--~~p~~~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~~~l~~~~~~~~i~ 83 (100)
T 3lrq_A 22 VFRCFICMEKL--RDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQLRELVNCRWAEEVT 83 (100)
T ss_dssp HTBCTTTCSBC--SSEEECTTTCCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECTTHHHHH
T ss_pred CCCCccCCccc--cCccccCCCCChhhHHHHHHHHHHCcCCCCCCCCcCCHHHhHhhHHHHHHH
Confidence 78999999999 3444438999999999999999987 6999999999877766555544443
No 11
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=99.26 E-value=3.3e-12 Score=92.65 Aligned_cols=51 Identities=35% Similarity=0.706 Sum_probs=43.8
Q ss_pred CCCcccccccccccCC-CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016624 30 SCDDACSICLEEFSES-DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 30 e~d~~C~ICle~f~~~-d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
..+..|+||++.|.+. ..+.+++|+|.||..||..|++....||+||..+.
T Consensus 3 ~~~~~C~IC~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~ 54 (55)
T 2ecm_A 3 SGSSGCPICLEDIHTSRVVAHVLPCGHLLHRTCYEEMLKEGYRCPLCSGPSS 54 (55)
T ss_dssp SCCCSCTTTCCCCCTTTSCEEECTTSCEEETTHHHHHHHHTCCCTTSCCSSC
T ss_pred CCCCcCcccChhhcCCCcCeEecCCCCcccHHHHHHHHHcCCcCCCCCCcCC
Confidence 3478999999998443 34778899999999999999999999999998874
No 12
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=99.26 E-value=2.3e-12 Score=104.83 Aligned_cols=61 Identities=23% Similarity=0.592 Sum_probs=49.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAVE 94 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~ve 94 (386)
+..|+||++.| .+++.+++|+|.||..||..|+.....||+||..+...++..+..+..+.
T Consensus 22 ~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~~l~~n~~l~~~i 82 (99)
T 2y43_A 22 LLRCGICFEYF--NIAMIIPQCSHNYCSLCIRKFLSYKTQCPTCCVTVTEPDLKNNRILDELV 82 (99)
T ss_dssp HTBCTTTCSBC--SSEEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHHHHH
T ss_pred CCCcccCChhh--CCcCEECCCCCHhhHHHHHHHHHCCCCCCCCCCcCChhhCCcCHHHHHHH
Confidence 78999999999 34444459999999999999999889999999999877666665555443
No 13
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=7.3e-12 Score=98.31 Aligned_cols=49 Identities=33% Similarity=0.716 Sum_probs=43.0
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
...+..|+||++.|. + +++++|+|.||..||..|+.....||+||..+.
T Consensus 12 ~~~~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~ 60 (81)
T 2csy_A 12 EEIPFRCFICRQAFQ--N-PVVTKCRHYFCESCALEHFRATPRCYICDQPTG 60 (81)
T ss_dssp CCCCSBCSSSCSBCC--S-EEECTTSCEEEHHHHHHHHHHCSBCSSSCCBCC
T ss_pred CCCCCCCcCCCchhc--C-eeEccCCCHhHHHHHHHHHHCCCcCCCcCcccc
Confidence 344779999999993 3 567899999999999999999999999999986
No 14
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=99.25 E-value=5.2e-12 Score=105.00 Aligned_cols=54 Identities=33% Similarity=0.679 Sum_probs=42.5
Q ss_pred CCCCcccccccccccCCC---------------CeeecccCCcccHHHHHHHHh-----cCCCCCCCcccCCCC
Q 016624 29 DSCDDACSICLEEFSESD---------------PSTVTSCKHEFHLQCVLEWCQ-----RSSQCPMCWQPISLK 82 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d---------------~~~vlpCgH~FC~~CI~~Wlq-----~~~sCP~CR~~i~~~ 82 (386)
...+..|+||++.|.... .+.+++|+|.||..||..|+. .+..||+||..+..+
T Consensus 22 ~~~~~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh~~Ci~~wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T 1v87_A 22 VAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp SCCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred CCCCCcCccCChhhcCcccccccccccccCcccceecCCCCCcccHHHHHHHHHcccCCCCCcCCCCCCccCCC
Confidence 344679999999985421 233789999999999999994 467899999988654
No 15
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.25 E-value=5e-12 Score=95.32 Aligned_cols=52 Identities=31% Similarity=0.659 Sum_probs=43.9
Q ss_pred CCCcccccccccccCC----CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 30 SCDDACSICLEEFSES----DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 30 e~d~~C~ICle~f~~~----d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
.++..|+||++.|.+. ..+.+++|+|.||..||..|+..+..||+||..|..
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 68 (69)
T 2ea6_A 13 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINH 68 (69)
T ss_dssp TCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEEHHHHHHHHHHCSSCTTTCCCCCC
T ss_pred CCCCCCcccCccccccccccCCeEeCCCCChhcHHHHHHHHHcCCCCCCCCCccCc
Confidence 4478999999998542 224778999999999999999999999999998764
No 16
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.22 E-value=5.5e-12 Score=99.88 Aligned_cols=53 Identities=28% Similarity=0.695 Sum_probs=42.1
Q ss_pred CCCcccccccccccC-----------CCCe-eecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 30 SCDDACSICLEEFSE-----------SDPS-TVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 30 e~d~~C~ICle~f~~-----------~d~~-~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
.+++.|+||++.|.+ .+.+ .+++|+|.||..||..|+..+.+||+||+.+...
T Consensus 13 ~~~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 77 (81)
T 2ecl_A 13 VECDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFHNCCMSLWVKQNNRCPLCQQDWVVQ 77 (81)
T ss_dssp CCCSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEEHHHHHHHTTTCCBCTTTCCBCCEE
T ss_pred CCCCCCcccChhhhccCcccccccCCCceEEEeCCCCCccChHHHHHHHHhCCCCCCcCCCcchh
Confidence 347789999988843 2223 4456999999999999999999999999988654
No 17
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=99.22 E-value=5.9e-12 Score=95.27 Aligned_cols=49 Identities=33% Similarity=0.855 Sum_probs=43.6
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
.+..|+||++.+ .+++.+++|+|.||..||..|+..+..||+||..+..
T Consensus 4 ~~~~C~IC~~~~--~~~~~~~~C~H~fc~~Ci~~~~~~~~~CP~Cr~~~~~ 52 (68)
T 1chc_A 4 VAERCPICLEDP--SNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVES 52 (68)
T ss_dssp CCCCCSSCCSCC--CSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCCC
T ss_pred CCCCCeeCCccc--cCCcEecCCCCeeHHHHHHHHHhCcCcCcCCChhhHh
Confidence 477899999998 4556888999999999999999999999999998763
No 18
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.21 E-value=5.9e-12 Score=96.59 Aligned_cols=50 Identities=28% Similarity=0.547 Sum_probs=43.3
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
..++..|+||++.|.+ +++++|+|.||..||..|+.....||+||..+..
T Consensus 12 ~~~~~~C~IC~~~~~~---~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~ 61 (71)
T 2d8t_A 12 SLTVPECAICLQTCVH---PVSLPCKHVFCYLCVKGASWLGKRCALCRQEIPE 61 (71)
T ss_dssp SSSCCBCSSSSSBCSS---EEEETTTEEEEHHHHHHCTTCSSBCSSSCCBCCH
T ss_pred CCCCCCCccCCcccCC---CEEccCCCHHHHHHHHHHHHCCCcCcCcCchhCH
Confidence 3457899999999833 5667999999999999999999999999999864
No 19
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=99.21 E-value=5.5e-12 Score=93.73 Aligned_cols=54 Identities=30% Similarity=0.623 Sum_probs=45.6
Q ss_pred CCcccccccccccCC----CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCc
Q 016624 31 CDDACSICLEEFSES----DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDA 84 (386)
Q Consensus 31 ~d~~C~ICle~f~~~----d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~ 84 (386)
++..|+||++.|... ..+.+++|+|.||..||..|+..+..||+||..+...+.
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 59 (64)
T 2xeu_A 2 AMVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 59 (64)
T ss_dssp CCCBCTTTCCBHHHHHHTTCCEEEETTSCEEEHHHHHHHHHHCSBCTTTCCBCTTTCE
T ss_pred CCCCCCccChhhhCccccCCCEEeCCCCCchhHHHHHHHHHcCCCCCCCCccCCccce
Confidence 468999999998531 234778999999999999999999999999999887653
No 20
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=99.21 E-value=8.2e-12 Score=103.26 Aligned_cols=50 Identities=26% Similarity=0.628 Sum_probs=43.5
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
++..|+||++.| .+++.+++|+|.||..||..|+.....||+||..+...
T Consensus 14 ~~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~CP~Cr~~~~~~ 63 (108)
T 2ckl_A 14 PHLMCVLCGGYF--IDATTIIECLHSFCKTCIVRYLETSKYCPICDVQVHKT 63 (108)
T ss_dssp GGTBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHTSCSBCTTTCCBSCSS
T ss_pred CcCCCccCChHH--hCcCEeCCCCChhhHHHHHHHHHhCCcCcCCCcccccc
Confidence 378999999999 44444459999999999999999999999999998865
No 21
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=99.21 E-value=1.1e-11 Score=99.23 Aligned_cols=61 Identities=23% Similarity=0.457 Sum_probs=46.9
Q ss_pred CCcccccccccccCCCCeeecc-cCCcccHHHHHHHHhcC--CCCCCCcccC-CCCCcchHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTS-CKHEFHLQCVLEWCQRS--SQCPMCWQPI-SLKDATSQELLEAVE 94 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlp-CgH~FC~~CI~~Wlq~~--~sCP~CR~~i-~~~d~~~~~lle~ve 94 (386)
++..|+||++.|. + +++++ |+|.||..||..|+... ..||+||..+ ...++..+..+..+.
T Consensus 12 ~~~~C~IC~~~~~--~-p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i 76 (92)
T 3ztg_A 12 DELLCLICKDIMT--D-AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPDALIANKFLRQAV 76 (92)
T ss_dssp TTTEETTTTEECS--S-CEECTTTCCEECHHHHHHHHHHCTTCCCTTTCCSSCCTTSCEECHHHHHHH
T ss_pred cCCCCCCCChhhc--C-ceECCCCCCHHHHHHHHHHHHhcCCCcCcCCCCcCCCccccCcCHHHHHHH
Confidence 4789999999993 4 45668 99999999999999754 5899999997 455555555554433
No 22
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=99.21 E-value=3.9e-12 Score=110.00 Aligned_cols=49 Identities=35% Similarity=0.833 Sum_probs=43.3
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKD 83 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d 83 (386)
++.|+||++.|. + +++++|||.||..||..|+..+..||+||..+....
T Consensus 53 ~~~C~iC~~~~~--~-~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 101 (138)
T 4ayc_A 53 ELQCIICSEYFI--E-AVTLNCAHSFCSYCINEWMKRKIECPICRKDIKSKT 101 (138)
T ss_dssp HSBCTTTCSBCS--S-EEEETTSCEEEHHHHHHHTTTCSBCTTTCCBCCCEE
T ss_pred cCCCcccCcccC--C-ceECCCCCCccHHHHHHHHHcCCcCCCCCCcCCCCC
Confidence 678999999993 3 667899999999999999999999999999987654
No 23
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=99.20 E-value=9.2e-12 Score=105.41 Aligned_cols=60 Identities=20% Similarity=0.359 Sum_probs=48.4
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcC-CCCCCCcccCCC-CCcchHHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS-SQCPMCWQPISL-KDATSQELLEAVE 94 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~-~sCP~CR~~i~~-~d~~~~~lle~ve 94 (386)
+..|+||++.|. + +++++|||.||..||..|+... ..||+||..+.. .++..+..+..+.
T Consensus 52 ~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~n~~l~~~i 113 (124)
T 3fl2_A 52 TFQCICCQELVF--R-PITTVCQHNVCKDCLDRSFRAQVFSCPACRYDLGRSYAMQVNQPLQTVL 113 (124)
T ss_dssp HTBCTTTSSBCS--S-EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCCCHHHHHHH
T ss_pred CCCCCcCChHHc--C-cEEeeCCCcccHHHHHHHHhHCcCCCCCCCccCCCCCCCCCCHHHHHHH
Confidence 679999999993 3 5667999999999999999854 489999999987 5566665555544
No 24
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.1e-11 Score=94.89 Aligned_cols=50 Identities=24% Similarity=0.656 Sum_probs=42.5
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHh---cCCCCCCCcccCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQ---RSSQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq---~~~sCP~CR~~i~~~d 83 (386)
++..|+||++.|. + +.+++|+|.||..||..|++ ....||+||..+...+
T Consensus 19 ~~~~C~IC~~~~~--~-~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 71 (73)
T 2ysl_A 19 EEVICPICLDILQ--K-PVTIDCGHNFCLKCITQIGETSCGFFKCPLCKTSVRKNA 71 (73)
T ss_dssp CCCBCTTTCSBCS--S-EEECTTCCEEEHHHHHHHCSSSCSCCCCSSSCCCCCCCC
T ss_pred cCCEeccCCcccC--C-eEEcCCCChhhHHHHHHHHHcCCCCCCCCCCCCcCCccc
Confidence 4789999999983 3 56679999999999999997 4568999999987654
No 25
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.20 E-value=1.3e-11 Score=97.40 Aligned_cols=53 Identities=26% Similarity=0.595 Sum_probs=44.6
Q ss_pred CCcccccccccccCCCC-eeecccCCcccHHHHHHHHhcC---CCCCCCcccCCCCC
Q 016624 31 CDDACSICLEEFSESDP-STVTSCKHEFHLQCVLEWCQRS---SQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~Wlq~~---~sCP~CR~~i~~~d 83 (386)
++..|+||++.|.+.+. +++++|+|.||..||..|+... ..||+||..+...+
T Consensus 14 ~~~~C~IC~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~ 70 (88)
T 2ct2_A 14 EVLECPICMESFTEEQLRPKLLHCGHTICRQCLEKLLASSINGVRCPFCSKITRITS 70 (88)
T ss_dssp SCCBCTTTCCBCCTTSSCEEECSSSCEEEHHHHHHHHHHCSSCBCCTTTCCCBCCSS
T ss_pred CCCCCccCCccccccCCCeEECCCCChhhHHHHHHHHHcCCCCcCCCCCCCcccchh
Confidence 47899999999955432 6778999999999999999876 78999999887653
No 26
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=99.18 E-value=1.8e-11 Score=98.00 Aligned_cols=61 Identities=10% Similarity=-0.047 Sum_probs=51.6
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAVE 94 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~ve 94 (386)
+++.|+||++.|. + +++++|||.||..||..|+.....||+|+..+...++.++..+....
T Consensus 13 ~~~~CpI~~~~m~--d-PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~l~pn~~L~~~i 73 (85)
T 2kr4_A 13 DEFRDPLMDTLMT--D-PVRLPSGTVMDRSIILRHLLNSPTDPFNRQMLTESMLEPVPELKEQI 73 (85)
T ss_dssp TTTBCTTTCSBCS--S-EEECTTSCEEEHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHH
T ss_pred hheECcccCchhc--C-CeECCCCCEECHHHHHHHHhcCCCCCCCcCCCChHhcchHHHHHHHH
Confidence 3889999999993 3 66678999999999999999889999999999988877776655443
No 27
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.18 E-value=1.5e-11 Score=92.96 Aligned_cols=50 Identities=24% Similarity=0.517 Sum_probs=42.0
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHh-cCCCCCCCcccCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQ-RSSQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq-~~~sCP~CR~~i~~~d 83 (386)
++..|+||++.+. ++ .+++|+|.||..||..|+. ....||+||..+...+
T Consensus 14 ~~~~C~IC~~~~~--~p-~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~ 64 (66)
T 2ecy_A 14 DKYKCEKCHLVLC--SP-KQTECGHRFCESCMAALLSSSSPKCTACQESIVKDK 64 (66)
T ss_dssp CCEECTTTCCEES--SC-CCCSSSCCCCHHHHHHHHTTSSCCCTTTCCCCCTTT
T ss_pred cCCCCCCCChHhc--Ce-eECCCCCHHHHHHHHHHHHhCcCCCCCCCcCCChhh
Confidence 3789999999993 44 4479999999999999995 5678999999987654
No 28
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=99.17 E-value=1.6e-11 Score=95.10 Aligned_cols=50 Identities=26% Similarity=0.525 Sum_probs=41.6
Q ss_pred CCcccccccccccCCCCeeecc-cCCcccHHHHHHHHhcC--CCCCCCcccCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTS-CKHEFHLQCVLEWCQRS--SQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlp-CgH~FC~~CI~~Wlq~~--~sCP~CR~~i~~~d 83 (386)
++..|+||++.| .+ +++++ |+|.||..||..|+... ..||+||+.+...+
T Consensus 14 ~~~~C~IC~~~~--~~-p~~~~~CgH~fC~~Ci~~~~~~~~~~~CP~Cr~~~~~~~ 66 (74)
T 2yur_A 14 DELLCLICKDIM--TD-AVVIPCCGNSYCDECIRTALLESDEHTCPTCHQNDVSPD 66 (74)
T ss_dssp GGGSCSSSCCCC--TT-CEECSSSCCEECTTHHHHHHHHSSSSCCSSSCCSSCCTT
T ss_pred CCCCCcCCChHH--hC-CeEcCCCCCHHHHHHHHHHHHhcCCCcCCCCCCcCCCcc
Confidence 478999999999 34 45567 99999999999999865 68999999866544
No 29
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.16 E-value=1.8e-11 Score=95.55 Aligned_cols=50 Identities=26% Similarity=0.702 Sum_probs=42.7
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhc------CCCCCCCcccCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR------SSQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~------~~sCP~CR~~i~~~d 83 (386)
++..|+||++.|. + +.+++|+|.||..||..|+.. ...||+||..+...+
T Consensus 18 ~~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecw_A 18 EEVTCPICLELLK--E-PVSADCNHSFCRACITLNYESNRNTDGKGNCPVCRVPYPFGN 73 (85)
T ss_dssp TTTSCTTTCSCCS--S-CEECTTSCCBCHHHHHHHHHHSBCTTSCBCCTTTCCCCCTTC
T ss_pred cCCCCcCCChhhC--c-ceeCCCCCHHHHHHHHHHHHhccCCCCCCCCCCCCCcCCHHh
Confidence 3789999999983 3 456799999999999999987 668999999987654
No 30
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=99.16 E-value=3.4e-11 Score=99.54 Aligned_cols=63 Identities=11% Similarity=-0.022 Sum_probs=53.3
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAVEQE 96 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~ve~e 96 (386)
+++.|+||++.|. + +++++|||.||..||..|+.....||+|+.++...++.++..+......
T Consensus 28 ~~~~CpI~~~~m~--d-PV~~~cGhtf~r~~I~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~I~~ 90 (100)
T 2kre_A 28 DEFRDPLMDTLMT--D-PVRLPSGTIMDRSIILRHLLNSPTDPFNRQTLTESMLEPVPELKEQIQA 90 (100)
T ss_dssp TTTBCTTTCSBCS--S-EEEETTTEEEEHHHHHHHTTSCSBCSSSCCBCCTTSSEECHHHHHHHHH
T ss_pred HhhCCcCccCccc--C-CeECCCCCEEchHHHHHHHHcCCCCCCCCCCCChhhceECHHHHHHHHH
Confidence 3789999999993 3 5666899999999999999988899999999998888887766655443
No 31
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=99.15 E-value=3e-11 Score=99.52 Aligned_cols=63 Identities=11% Similarity=0.073 Sum_probs=53.4
Q ss_pred CCcccccccccccCCCCeeecccC-CcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTSCK-HEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAVEQE 96 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCg-H~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~ve~e 96 (386)
+++.|+||++.|. + +++++|+ |.||..||..|+.....||+|+.++...++.++..+......
T Consensus 21 ~~~~CpI~~~~m~--d-PV~~~cG~htf~r~cI~~~l~~~~~cP~~~~~l~~~~L~pn~~Lk~~I~~ 84 (98)
T 1wgm_A 21 DEFLDPIMSTLMC--D-PVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQR 84 (98)
T ss_dssp TTTBCTTTCSBCS--S-EEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEECHHHHHHHHH
T ss_pred HhcCCcCcccccc--C-CeECCCCCeEECHHHHHHHHHhCCCCCCCCCCCChhhceEcHHHHHHHHH
Confidence 4889999999993 3 6667999 999999999999988899999999998888877766655443
No 32
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=99.15 E-value=2e-11 Score=102.19 Aligned_cols=52 Identities=23% Similarity=0.611 Sum_probs=43.6
Q ss_pred CCCcccccccccccCC---------------CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 30 SCDDACSICLEEFSES---------------DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 30 e~d~~C~ICle~f~~~---------------d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
.+++.|+||++.|... ..+.+++|+|.||..||..|+..+.+||+||+.+..
T Consensus 35 ~~~d~CaIC~~~~~~~c~~C~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~Cr~~~~~ 101 (106)
T 3dpl_R 35 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEF 101 (106)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCE
T ss_pred CCCCCCccCChhHhCcCchhhccccccCCccceEeecccCcEECHHHHHHHHHcCCcCcCCCCccee
Confidence 3578899999998532 125668999999999999999999999999998754
No 33
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=99.14 E-value=4e-11 Score=105.69 Aligned_cols=62 Identities=19% Similarity=0.410 Sum_probs=50.0
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCC-CCCCCcccCCCC-CcchHHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSS-QCPMCWQPISLK-DATSQELLEAVEQ 95 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~-sCP~CR~~i~~~-d~~~~~lle~ve~ 95 (386)
++..|+||++.|. + +++++|+|.||..||..|+.... .||+||..+... .+..+..+..+..
T Consensus 77 ~~~~C~IC~~~~~--~-pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~n~~l~~lv~ 140 (150)
T 1z6u_A 77 QSFMCVCCQELVY--Q-PVTTECFHNVCKDCLQRSFKAQVFSCPACRHDLGQNYIMIPNEILQTLLD 140 (150)
T ss_dssp HHTBCTTTSSBCS--S-EEECTTSCEEEHHHHHHHHHTTCCBCTTTCCBCCTTCCCCBCHHHHHHHH
T ss_pred cCCEeecCChhhc--C-CEEcCCCCchhHHHHHHHHHhCCCcCCCCCccCCCCCCCCCCHHHHHHHH
Confidence 3679999999983 3 56689999999999999998754 899999999877 5666666555543
No 34
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=9.4e-12 Score=94.79 Aligned_cols=50 Identities=24% Similarity=0.820 Sum_probs=43.6
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCC
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKD 83 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d 83 (386)
.++..|+||++.+.+ .+++|+|.||..||..|+.....||+||..+...+
T Consensus 13 ~~~~~C~IC~~~~~~----~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~ 62 (70)
T 2ecn_A 13 TDEEECCICMDGRAD----LILPCAHSFCQKCIDKWSDRHRNCPICRLQMTGAN 62 (70)
T ss_dssp CCCCCCSSSCCSCCS----EEETTTEEECHHHHHHSSCCCSSCHHHHHCTTCCC
T ss_pred CCCCCCeeCCcCccC----cccCCCCcccHHHHHHHHHCcCcCCCcCCcccCCC
Confidence 347899999999833 67899999999999999999999999999987654
No 35
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.13 E-value=2.3e-11 Score=94.87 Aligned_cols=50 Identities=26% Similarity=0.636 Sum_probs=42.8
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhc------CCCCCCCcccCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR------SSQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~------~~sCP~CR~~i~~~d 83 (386)
++..|+||++.|. + +.+++|+|.||..||..|+.. ...||+||..+...+
T Consensus 18 ~~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 73 (85)
T 2ecv_A 18 EEVTCPICLELLT--Q-PLSLDCGHSFCQACLTANHKKSMLDKGESSCPVCRISYQPEN 73 (85)
T ss_dssp CCCCCTTTCSCCS--S-CBCCSSSCCBCTTHHHHHHHHHHHTTSCCCCTTTCCSSCSSS
T ss_pred CCCCCCCCCcccC--C-ceeCCCCCHHHHHHHHHHHHHhhcCCCCCcCCCCCCccCHHh
Confidence 3789999999983 3 456799999999999999987 678999999988654
No 36
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=99.13 E-value=7.9e-12 Score=96.95 Aligned_cols=50 Identities=26% Similarity=0.604 Sum_probs=42.3
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhc-------CCCCCCCcccCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-------SSQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-------~~sCP~CR~~i~~~d 83 (386)
++..|+||++.|. + +++++|+|.||..||..|+.. ...||+||..+...+
T Consensus 11 ~~~~C~IC~~~~~--~-p~~l~CgH~fC~~Ci~~~~~~~~~~~~~~~~CP~Cr~~~~~~~ 67 (79)
T 2egp_A 11 EEVTCPICLELLT--E-PLSLDCGHSLCRACITVSNKEAVTSMGGKSSCPVCGISYSFEH 67 (79)
T ss_dssp CCCEETTTTEECS--S-CCCCSSSCCCCHHHHSCCCCCCSSSCCCCCCCSSSCCCCCSSG
T ss_pred cCCCCcCCCcccC--C-eeECCCCCHHHHHHHHHHHHhcccCCCCCCcCCCCCCcCCHhh
Confidence 3789999999983 3 455799999999999999976 568999999987654
No 37
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=99.12 E-value=2.2e-11 Score=107.87 Aligned_cols=61 Identities=21% Similarity=0.591 Sum_probs=46.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCC-CCcchHHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISL-KDATSQELLEAVE 94 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~-~d~~~~~lle~ve 94 (386)
+..|+||++.| .+++.+++|+|.||..||..|+.. ...||+||..+.. ..+..+..+..+.
T Consensus 54 ~~~C~IC~~~~--~~p~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~l~~~~~l~~~i 116 (165)
T 2ckl_B 54 ELMCPICLDML--KNTMTTKECLHRFCADCIITALRSGNKECPTCRKKLVSKRSLRPDPNFDALI 116 (165)
T ss_dssp HHBCTTTSSBC--SSEEEETTTCCEEEHHHHHHHHHTTCCBCTTTCCBCCSGGGEEECHHHHHHH
T ss_pred CCCCcccChHh--hCcCEeCCCCChhHHHHHHHHHHhCcCCCCCCCCcCCCcccCCcCHHHHHHH
Confidence 66999999999 445555599999999999999987 7789999999854 3344444444433
No 38
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.08 E-value=8.1e-11 Score=87.91 Aligned_cols=42 Identities=29% Similarity=0.794 Sum_probs=35.9
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHh---cCCCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQ---RSSQCPMC 75 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq---~~~sCP~C 75 (386)
++..|+||++.|. + +++++|+|.||..||..|++ ....||+|
T Consensus 19 ~~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 63 (63)
T 2ysj_A 19 EEVICPICLDILQ--K-PVTIDCGHNFCLKCITQIGETSCGFFKCPLC 63 (63)
T ss_dssp CCCBCTTTCSBCS--S-CEECTTSSEECHHHHHHHHHHCSSCCCCSCC
T ss_pred cCCCCCcCCchhC--C-eEEeCCCCcchHHHHHHHHHcCCCCCcCcCC
Confidence 4789999999983 3 56669999999999999998 45689998
No 39
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.06 E-value=8e-11 Score=88.59 Aligned_cols=54 Identities=24% Similarity=0.535 Sum_probs=42.5
Q ss_pred CCcccccccc-cccCCCC-eeecccCCcccHHHHHHHHhc-CCCCCCCcccCCCCCc
Q 016624 31 CDDACSICLE-EFSESDP-STVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISLKDA 84 (386)
Q Consensus 31 ~d~~C~ICle-~f~~~d~-~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d~ 84 (386)
++..|+||++ .|..... ..+++|||.||..||..|+.. ...||+||..+...+.
T Consensus 2 ~~~~C~IC~~~~~~~~~~~~~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 58 (65)
T 1g25_A 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCC
T ss_pred CCCcCCcCCCCccCCCccCeecCCCCCHhHHHHHHHHHHcCCCcCCCCCCccccccc
Confidence 4788999999 7743221 246799999999999999765 4679999999887654
No 40
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.05 E-value=3.3e-11 Score=99.40 Aligned_cols=50 Identities=34% Similarity=0.701 Sum_probs=41.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcC---CCCCCCcccCCCCCc
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS---SQCPMCWQPISLKDA 84 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~---~sCP~CR~~i~~~d~ 84 (386)
+..|+||++.|. + +.+++|+|.||..||..|+... ..||+||..+...++
T Consensus 21 ~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~~ 73 (112)
T 1jm7_A 21 ILECPICLELIK--E-PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73 (112)
T ss_dssp HTSCSSSCCCCS--S-CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTC
T ss_pred CCCCcccChhhc--C-eEECCCCCHHHHHHHHHHHHhCCCCCCCcCCCCcCCHhhc
Confidence 678999999983 3 4557999999999999999865 389999999876543
No 41
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=99.05 E-value=9.1e-11 Score=98.65 Aligned_cols=62 Identities=18% Similarity=0.428 Sum_probs=49.3
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCC-CCCCCcccCCCCCcchHHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSS-QCPMCWQPISLKDATSQELLEAVEQ 95 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~-sCP~CR~~i~~~d~~~~~lle~ve~ 95 (386)
++..|+||++.|. + ++.++|+|.||..||..|+.... .||+||..+...+......+.....
T Consensus 17 ~~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~l~~~i~ 79 (118)
T 3hct_A 17 SKYECPICLMALR--E-AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREIL 79 (118)
T ss_dssp GGGBCTTTCSBCS--S-EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHHH
T ss_pred CCCCCCcCChhhc--C-eEECCcCChhhHHHHHHHHhhCCCCCCCCCCCcCHHhcccCHHHHHHHc
Confidence 3789999999983 3 56679999999999999998765 9999999998776555555444443
No 42
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=99.03 E-value=5.6e-11 Score=99.83 Aligned_cols=58 Identities=26% Similarity=0.637 Sum_probs=47.0
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAV 93 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~v 93 (386)
+..|+||++.| .+++.+.+|||.||..||..|+. ..||+||..+...++..+..+..+
T Consensus 22 ~~~C~IC~~~~--~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~~~~n~~l~~l 79 (117)
T 1jm7_B 22 LLRCSRCTNIL--REPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLKINRQLDSM 79 (117)
T ss_dssp TTSCSSSCSCC--SSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCCCCHHHHHH
T ss_pred CCCCCCCChHh--hCccEeCCCCCHHHHHHHHHHhc--CCCcCCCCcCccccccccHHHHHH
Confidence 78999999999 44444449999999999999997 789999999987777665554443
No 43
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=99.02 E-value=1e-10 Score=98.20 Aligned_cols=55 Identities=31% Similarity=0.628 Sum_probs=46.1
Q ss_pred CCCcccccccccccCC----CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCc
Q 016624 30 SCDDACSICLEEFSES----DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDA 84 (386)
Q Consensus 30 e~d~~C~ICle~f~~~----d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~ 84 (386)
.++..|+||++.|.+. ..+++++|||.||..||..|++....||+||+.+...+.
T Consensus 5 ~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~l 63 (133)
T 4ap4_A 5 SGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 63 (133)
T ss_dssp CCSCBCTTTCCBHHHHHHTTCCEEEETTCCEEEHHHHHHHHTTCSBCTTTCCBCTTTCE
T ss_pred CCCCCCcccChhhhCccccccCeEecCCCChhhHHHHHHHHHhCCCCCCCCCcCccccc
Confidence 4578999999998541 234778999999999999999999999999999876543
No 44
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=99.00 E-value=4.8e-11 Score=99.53 Aligned_cols=49 Identities=24% Similarity=0.622 Sum_probs=41.5
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCC
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISL 81 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~ 81 (386)
.++..|+||++.|. + +++++|+|.||..||..|+.. ...||+||..+..
T Consensus 13 ~~~~~C~iC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~ 62 (115)
T 3l11_A 13 LSECQCGICMEILV--E-PVTLPCNHTLCKPCFQSTVEKASLCCPFCRRRVSS 62 (115)
T ss_dssp HHHHBCTTTCSBCS--S-CEECTTSCEECHHHHCCCCCTTTSBCTTTCCBCHH
T ss_pred CCCCCCccCCcccC--c-eeEcCCCCHHhHHHHHHHHhHCcCCCCCCCcccCc
Confidence 34789999999983 3 566699999999999999976 6689999999863
No 45
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=99.00 E-value=4.5e-11 Score=101.89 Aligned_cols=53 Identities=23% Similarity=0.646 Sum_probs=1.5
Q ss_pred CCCcccccccccccCC-------------C--CeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 30 SCDDACSICLEEFSES-------------D--PSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 30 e~d~~C~ICle~f~~~-------------d--~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
..++.|+||++.|... + .+..++|+|.||..||..|+..+.+||+||+.+..+
T Consensus 46 ~~~d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~FH~~CI~~Wl~~~~~CP~Cr~~~~~~ 113 (117)
T 4a0k_B 46 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQ 113 (117)
T ss_dssp CCC-----------------------------------------------------------------
T ss_pred CCCCcCeECChhhcCcChhhhcccccccccccccccCCcCceEcHHHHHHHHHcCCcCCCCCCeeeee
Confidence 3468999999998431 1 233469999999999999999999999999987543
No 46
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.00 E-value=2.5e-10 Score=92.83 Aligned_cols=63 Identities=21% Similarity=0.430 Sum_probs=50.3
Q ss_pred CCcccccccccccCCCCeeec-ccCCcccHHHHHHHHhcC------CCCCC--Cccc-CCCCCcchHHHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVT-SCKHEFHLQCVLEWCQRS------SQCPM--CWQP-ISLKDATSQELLEAVEQE 96 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vl-pCgH~FC~~CI~~Wlq~~------~sCP~--CR~~-i~~~d~~~~~lle~ve~e 96 (386)
.++.|+||++.| .+ ++++ .|||.||..||..|+... ..||+ |+.. +...++.++..+..+...
T Consensus 6 ~~~~CPI~~~~~--~d-PV~~~~cGh~f~r~cI~~~l~~~~~~~~~~~CP~tgc~~~~l~~~~L~pn~~L~~~I~~ 78 (94)
T 2yu4_A 6 SGFTCPITKEEM--KK-PVKNKVCGHTYEEDAIVRMIESRQKRKKKAYCPQIGCSHTDIRKSDLIQDEALRRAIEN 78 (94)
T ss_dssp SCCBCTTTCSBC--SS-EEEESSSCCEEEHHHHHHHHHHHHTTTCCBCCCSTTCCCCCBCGGGEEECHHHHHHHHH
T ss_pred cEeECcCcCchh--cC-CEEcCCCCCeecHHHHHHHHHHccCcCCCCCCCcCcCcccccCHhhCcCCHHHHHHHHH
Confidence 478999999999 34 5555 599999999999999753 48999 9887 877888777766655544
No 47
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=98.99 E-value=2e-10 Score=107.75 Aligned_cols=64 Identities=14% Similarity=0.129 Sum_probs=52.2
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC-CCCCCCcccCCCCCcchHHHHHHHHH
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS-SQCPMCWQPISLKDATSQELLEAVEQ 95 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~-~sCP~CR~~i~~~d~~~~~lle~ve~ 95 (386)
...+..|+||++.|. + |++++|||.||..||..|+... ..||+|+.++...++.++..+..+..
T Consensus 205 ~~~~~~c~i~~~~~~--d-Pv~~~~gh~f~~~~i~~~~~~~~~~cP~~~~~~~~~~l~~n~~l~~~i~ 269 (281)
T 2c2l_A 205 IPDYLCGKISFELMR--E-PCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVID 269 (281)
T ss_dssp CCSTTBCTTTCSBCS--S-EEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHH
T ss_pred CCcccCCcCcCCHhc--C-CeECCCCCEECHHHHHHHHHHCCCCCcCCCCCCchhcCcccHHHHHHHH
Confidence 345889999999993 3 6667999999999999999864 45999999999888877776665544
No 48
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.98 E-value=2e-10 Score=83.81 Aligned_cols=42 Identities=33% Similarity=1.017 Sum_probs=35.3
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHh---cCCCCCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQ---RSSQCPMC 75 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq---~~~sCP~C 75 (386)
++..|+||++.|. + +++++|+|.||..||..|+. ....||+|
T Consensus 14 ~~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~~~CP~C 58 (58)
T 2ecj_A 14 VEASCSVCLEYLK--E-PVIIECGHNFCKACITRWWEDLERDFPCPVC 58 (58)
T ss_dssp CCCBCSSSCCBCS--S-CCCCSSCCCCCHHHHHHHTTSSCCSCCCSCC
T ss_pred cCCCCccCCcccC--c-cEeCCCCCccCHHHHHHHHHhcCCCCCCCCC
Confidence 4789999999993 3 45679999999999999954 46789998
No 49
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.97 E-value=2.8e-10 Score=90.56 Aligned_cols=54 Identities=30% Similarity=0.689 Sum_probs=44.3
Q ss_pred CCCCCcccccccccccCCCCeeecccC-----CcccHHHHHHHHhcC--CCCCCCcccCCCC
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCK-----HEFHLQCVLEWCQRS--SQCPMCWQPISLK 82 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCg-----H~FC~~CI~~Wlq~~--~sCP~CR~~i~~~ 82 (386)
.+.++..|.||++.|.++++ .+++|. |.||..||.+|+..+ ..||+||..+...
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~-l~~pC~C~Gs~h~fH~~Cl~~Wl~~~~~~~CplCr~~~~~~ 71 (80)
T 2d8s_A 11 TPSSQDICRICHCEGDDESP-LITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIME 71 (80)
T ss_dssp CCTTSCCCSSSCCCCCSSSC-EECSSSCCSSSCCEETTHHHHHHHHHCCSBCSSSCCBCCCC
T ss_pred CCCCCCCCeEcCccccCCCe-eEeccccCCcCCeeCHHHHHHHHhhCCCCCCCCCCCeeecC
Confidence 34557899999999866555 468996 999999999999865 4899999998754
No 50
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=98.97 E-value=1.5e-10 Score=96.73 Aligned_cols=50 Identities=36% Similarity=0.655 Sum_probs=43.3
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCCCCc
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISLKDA 84 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d~ 84 (386)
+..|+||++.|. + ++.++|+|.||..||..|+.. ...||+||..+...++
T Consensus 23 ~~~C~IC~~~~~--~-p~~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~ 73 (116)
T 1rmd_A 23 SISCQICEHILA--D-PVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDL 73 (116)
T ss_dssp HTBCTTTCSBCS--S-EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGC
T ss_pred CCCCCCCCcHhc--C-cEEcCCCCcccHHHHHHHHhHCcCcCCCCCCCCCHhhc
Confidence 789999999983 3 566899999999999999987 6789999999887654
No 51
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=98.95 E-value=5e-10 Score=88.62 Aligned_cols=53 Identities=19% Similarity=0.434 Sum_probs=41.7
Q ss_pred CCCcccccccccccCCCCeeecc--cCCcccHHHHHHHHhc-CCCCCCCcccCCCCC
Q 016624 30 SCDDACSICLEEFSESDPSTVTS--CKHEFHLQCVLEWCQR-SSQCPMCWQPISLKD 83 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlp--CgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d 83 (386)
+++..|+||++.|...+ +.+++ |||.||..||..|+.. ...||+||+.+...+
T Consensus 9 ~~~~~CpICle~~~~~d-~~~~p~~CGH~fC~~Cl~~~~~~~~~~CP~CR~~~~~~~ 64 (78)
T 1e4u_A 9 EDPVECPLCMEPLEIDD-INFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPEDP 64 (78)
T ss_dssp CCCCBCTTTCCBCCTTT-TTCCSSTTSCCCCHHHHHHHTTSSCSBCTTTCCBCSSCS
T ss_pred ccCCcCCccCccCcccc-ccccccCCCCCcCHHHHHHHHhcCCCCCCCCCCccCCCc
Confidence 34789999999984433 34444 9999999999999854 568999999987654
No 52
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=98.91 E-value=2.9e-10 Score=95.41 Aligned_cols=57 Identities=30% Similarity=0.608 Sum_probs=47.4
Q ss_pred CCCCCcccccccccccC----CCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCc
Q 016624 28 QDSCDDACSICLEEFSE----SDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDA 84 (386)
Q Consensus 28 qde~d~~C~ICle~f~~----~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~ 84 (386)
.++++..|+||++.|.. ...+..++|+|.||..||..|++....||+||..+...+.
T Consensus 68 i~~~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc~~Ci~~~~~~~~~CP~Cr~~~~~~~~ 128 (133)
T 4ap4_A 68 IGSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFCSQCLRDSLKNANTCPTCRKKINHKRY 128 (133)
T ss_dssp CSSSSCBCTTTCCBHHHHHHTTCCEEEETTSBEEEHHHHHHHHHHCSBCTTTCCBCCGGGE
T ss_pred cCCCCCCCCCCCCccccccccCcceEeCCCCChhhHHHHHHHHHcCCCCCCCCCcCChhcc
Confidence 35568899999999853 1234778999999999999999999999999999887653
No 53
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=98.86 E-value=5.4e-10 Score=97.52 Aligned_cols=48 Identities=17% Similarity=0.404 Sum_probs=40.8
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCC-CCCCCcccCCC
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSS-QCPMCWQPISL 81 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~-sCP~CR~~i~~ 81 (386)
++..|+||++.|. + ++.++|||.||..||..|+.... .||+||..+..
T Consensus 30 ~~~~C~IC~~~~~--~-pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~~~~~ 78 (141)
T 3knv_A 30 AKYLCSACRNVLR--R-PFQAQCGHRYCSFCLASILSSGPQNCAACVHEGIY 78 (141)
T ss_dssp GGGBCTTTCSBCS--S-EEECTTSCEEEHHHHHHHGGGSCEECHHHHHTTCC
T ss_pred cCcCCCCCChhhc--C-cEECCCCCccCHHHHHHHHhcCCCCCCCCCCcccc
Confidence 3789999999993 3 56679999999999999998664 89999998654
No 54
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=98.86 E-value=1.6e-09 Score=98.61 Aligned_cols=64 Identities=14% Similarity=0.138 Sum_probs=52.4
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC-CCCCCCcccCCCCCcchHHHHHHHHHH
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS-SQCPMCWQPISLKDATSQELLEAVEQE 96 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~-~sCP~CR~~i~~~d~~~~~lle~ve~e 96 (386)
..++.||||++.|. + |++++|||.||..||..|+... .+||+|+.++...++.++..+......
T Consensus 104 p~~f~CPI~~elm~--D-PV~~~~Ghtfer~~I~~~l~~~~~tcP~t~~~l~~~~L~pN~~Lk~~Ie~ 168 (179)
T 2f42_A 104 PDYLCGKISFELMR--E-PCITPSGITYDRKDIEEHLQRVGHFDPVTRSPLTQDQLIPNLAMKEVIDA 168 (179)
T ss_dssp CGGGBCTTTCSBCS--S-EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCEECHHHHHHHHH
T ss_pred cHhhcccCccccCC--C-CeECCCCCEECHHHHHHHHHhCCCCCCCCcCCCChhhCcchHHHHHHHHH
Confidence 34889999999994 3 6667999999999999999864 469999999998888877766655443
No 55
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.85 E-value=5.8e-10 Score=82.18 Aligned_cols=49 Identities=24% Similarity=0.467 Sum_probs=40.3
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCC
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKD 83 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d 83 (386)
+.++..|+||++.|. + +++++|+|.||..||..| ...||+||+.+...+
T Consensus 3 e~~~~~C~IC~~~~~--~-p~~l~CgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~ 51 (56)
T 1bor_A 3 EFQFLRCQQCQAEAK--C-PKLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGA 51 (56)
T ss_dssp SCCCSSCSSSCSSCB--C-CSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCS
T ss_pred cccCCCceEeCCccC--C-eEEcCCCCcccHHHHccC---CCCCCcCCcEeecCC
Confidence 456889999999994 3 567899999999999874 568999999987643
No 56
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=98.82 E-value=2.1e-09 Score=81.48 Aligned_cols=48 Identities=25% Similarity=0.594 Sum_probs=41.0
Q ss_pred CCCcccccccccccCCCCeeec--ccCCc-ccHHHHHHHHhcCCCCCCCcccCC
Q 016624 30 SCDDACSICLEEFSESDPSTVT--SCKHE-FHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vl--pCgH~-FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
+++..|.||++.+. + +.++ +|||. ||..|+..|+.....||+||+.+.
T Consensus 6 ~~~~~C~IC~~~~~--~-~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 56 (64)
T 2vje_A 6 NAIEPCVICQGRPK--N-GCIVHGKTGHLMACFTCAKKLKKRNKPCPVCRQPIQ 56 (64)
T ss_dssp GGGSCCTTTSSSCS--C-EEEEETTEEEEEECHHHHHHHHHTTCCCTTTCCCCC
T ss_pred CCcCCCCcCCCCCC--C-EEEECCCCCChhhHHHHHHHHHHcCCcCCCcCcchh
Confidence 45789999999973 3 4544 99999 899999999998899999999875
No 57
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=98.81 E-value=1.4e-09 Score=104.37 Aligned_cols=61 Identities=23% Similarity=0.505 Sum_probs=51.2
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcC--CCCCC--CcccCCCCCcchHHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS--SQCPM--CWQPISLKDATSQELLEAVE 94 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~--~sCP~--CR~~i~~~d~~~~~lle~ve 94 (386)
+..||||++.| .+|++.+.|||.||..||..|+... ..||+ |++.+...++.++..+..+.
T Consensus 181 el~CPIcl~~f--~DPVts~~CGHsFcR~cI~~~~~~~~~~~CPvtGCr~~l~~~dL~pN~~L~~lv 245 (267)
T 3htk_C 181 ELTCPITCKPY--EAPLISRKCNHVFDRDGIQNYLQGYTTRDCPQAACSQVVSMRDFVRDPIMELRC 245 (267)
T ss_dssp CSBCTTTSSBC--SSEEEESSSCCEEEHHHHHHHSTTCSCEECSGGGCSCEECGGGEEECHHHHHHH
T ss_pred eeECcCccCcc--cCCeeeCCCCCcccHHHHHHHHHhCCCCCCCcccccCcCchhhCCcCHHHHHHH
Confidence 77999999999 5666667999999999999999764 47999 99999988888776665543
No 58
>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}
Probab=98.81 E-value=2.1e-09 Score=95.40 Aligned_cols=61 Identities=18% Similarity=0.440 Sum_probs=48.4
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC-CCCCCCcccCCCCCcchHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS-SQCPMCWQPISLKDATSQELLEAVE 94 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~-~sCP~CR~~i~~~d~~~~~lle~ve 94 (386)
+++.|+||++.|. + ++.++|||.||..||..|+... ..||+||..+...+......+....
T Consensus 17 ~~~~C~IC~~~~~--~-pv~~~CgH~fC~~Ci~~~~~~~~~~CP~Cr~~~~~~~~~~~~~~~~~i 78 (170)
T 3hcs_A 17 SKYECPICLMALR--E-AVQTPCGHRFCKACIIKSIRDAGHKCPVDNEILLENQLFPDNFAKREI 78 (170)
T ss_dssp GGGBCTTTCSBCS--S-EEECTTSCEEEHHHHHHHHHHHCSBCTTTCCBCCGGGCEECHHHHHHH
T ss_pred CCCCCCCCChhhc--C-cEECCCCCHHHHHHHHHHHHhCCCCCCCCccCcchhhhhhhHHHHHHH
Confidence 3789999999993 3 5668999999999999999764 4899999999876655554444433
No 59
>2ct0_A Non-SMC element 1 homolog; ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.80 E-value=4.5e-09 Score=82.74 Aligned_cols=50 Identities=24% Similarity=0.579 Sum_probs=41.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcC--CCCCCCcccCCCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS--SQCPMCWQPISLKD 83 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~--~sCP~CR~~i~~~d 83 (386)
...|.||++.|..+ .....|+|.||..||..|++.+ .+||+|+..|....
T Consensus 15 i~~C~IC~~~i~~g--~~C~~C~h~fH~~Ci~kWl~~~~~~~CP~Cr~~w~~~~ 66 (74)
T 2ct0_A 15 VKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEI 66 (74)
T ss_dssp SCBCSSSCCBCSSS--EECSSSCCEECHHHHHHHSTTCSSCCCTTTCSCCCSCC
T ss_pred CCcCcchhhHcccC--CccCCCCchhhHHHHHHHHHhcCCCCCCCCcCcCCCCC
Confidence 56899999999543 3445899999999999999887 78999999987543
No 60
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=98.75 E-value=4.8e-09 Score=105.70 Aligned_cols=48 Identities=25% Similarity=0.619 Sum_probs=41.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHh-cCCCCCCCcccCCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQ-RSSQCPMCWQPISLK 82 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq-~~~sCP~CR~~i~~~ 82 (386)
+..|+||++.+. .++.++|+|.||..||..|+. ....||+||..+...
T Consensus 332 ~~~C~ICle~~~---~pv~lpCGH~FC~~Ci~~wl~~~~~~CP~CR~~i~~~ 380 (389)
T 2y1n_A 332 FQLCKICAENDK---DVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGT 380 (389)
T ss_dssp SSBCTTTSSSBC---CEEEETTCCEECHHHHHHHHHHTCSBCTTTCCBCCEE
T ss_pred CCCCCccCcCCC---CeEEeCCCChhhHHHHHHHHhcCCCCCCCCCCccCCc
Confidence 479999999983 367789999999999999998 678999999988754
No 61
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=98.74 E-value=1.8e-09 Score=83.82 Aligned_cols=43 Identities=28% Similarity=0.716 Sum_probs=37.6
Q ss_pred CcccccccccccCCCCeeecccCCc-ccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHE-FHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~-FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
+..|+||++.+.+ +..++|+|. ||..|+..| ..||+||..+..
T Consensus 24 ~~~C~iC~~~~~~---~~~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 67 (74)
T 4ic3_A 24 EKLCKICMDRNIA---IVFVPCGHLVTCKQCAEAV----DKCPMCYTVITF 67 (74)
T ss_dssp HTBCTTTSSSBCC---EEEETTCCBCCCHHHHTTC----SBCTTTCCBCSE
T ss_pred CCCCCCCCCCCCC---EEEcCCCChhHHHHhhhcC----ccCCCcCcCccC
Confidence 6799999999833 667799999 999999998 889999998764
No 62
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=98.74 E-value=4.8e-09 Score=79.25 Aligned_cols=48 Identities=21% Similarity=0.500 Sum_probs=40.4
Q ss_pred CCCcccccccccccCCCCeeec--ccCCc-ccHHHHHHHHhcCCCCCCCcccCC
Q 016624 30 SCDDACSICLEEFSESDPSTVT--SCKHE-FHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vl--pCgH~-FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
+.+..|.||++.+. + +.++ +|||. ||..|+..|++....||+||+.+.
T Consensus 5 ~~~~~C~IC~~~~~--~-~~~~~~pCgH~~~C~~C~~~~~~~~~~CPiCR~~i~ 55 (63)
T 2vje_B 5 NLLKPCSLCEKRPR--D-GNIIHGRTGHLVTCFHCARRLKKAGASCPICKKEIQ 55 (63)
T ss_dssp GGGSBCTTTSSSBS--C-EEEEETTEEEEEECHHHHHHHHHTTCBCTTTCCBCC
T ss_pred CcCCCCcccCCcCC--C-eEEEecCCCCHhHHHHHHHHHHHhCCcCCCcCchhh
Confidence 34678999999873 2 3444 99998 999999999988889999999885
No 63
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.57 E-value=1.3e-08 Score=79.01 Aligned_cols=44 Identities=30% Similarity=0.736 Sum_probs=36.5
Q ss_pred CcccccccccccCCCCeeecccCCc-ccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHE-FHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~-FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
+..|+||++.+.+ +.+++|+|. ||..|+.. ...||+||..+...
T Consensus 25 ~~~C~IC~~~~~~---~~~~pCgH~~~C~~C~~~----~~~CP~Cr~~i~~~ 69 (75)
T 2ecg_A 25 EKLCKICMDRNIA---IVFVPCGHLVTCKQCAEA----VDKCPMCYTVITFK 69 (75)
T ss_dssp HHSCSSSCSSCCC---BCCSSSCCCCBCHHHHHH----CSBCTTTCCBCCCC
T ss_pred CCCCCcCCCCCCC---EEEecCCCHHHHHHHhhC----CCCCccCCceecCc
Confidence 6789999999833 667899999 99999954 47899999988653
No 64
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.50 E-value=7e-08 Score=74.09 Aligned_cols=47 Identities=26% Similarity=0.552 Sum_probs=38.7
Q ss_pred CCCCCcccccccccccCCCCeeecccCCc-ccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCKHE-FHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~-FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
.++++..|.||++.+. .+.+++|+|. ||..|+.. ...||+||..|..
T Consensus 11 ~~~~~~~C~IC~~~~~---~~v~~pCgH~~~C~~C~~~----~~~CP~CR~~i~~ 58 (68)
T 2ea5_A 11 SEENSKDCVVCQNGTV---NWVLLPCRHTCLCDGCVKY----FQQCPMCRQFVQE 58 (68)
T ss_dssp SCCCSSCCSSSSSSCC---CCEETTTTBCCSCTTHHHH----CSSCTTTCCCCCC
T ss_pred cCCCCCCCCCcCcCCC---CEEEECCCChhhhHHHHhc----CCCCCCCCcchhc
Confidence 3445789999999973 3677899999 99999973 5789999998864
No 65
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=98.48 E-value=4.5e-08 Score=73.85 Aligned_cols=51 Identities=12% Similarity=0.281 Sum_probs=43.1
Q ss_pred CcccccccccccCCCCeeec-ccCCcccHHHHHHHHhcCCCCCCCcccCCCCCcc
Q 016624 32 DDACSICLEEFSESDPSTVT-SCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDAT 85 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vl-pCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~ 85 (386)
...|+||++.+. + ++++ +|||.|+..||.+|+..+..||++++++...++.
T Consensus 3 ~~~CpIs~~~m~--d-PV~~~~sG~~yer~~I~~~l~~~~~cP~t~~~L~~~~Li 54 (61)
T 2bay_A 3 HMLCAISGKVPR--R-PVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEIV 54 (61)
T ss_dssp -CCCTTTCSCCS--S-EEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGCE
T ss_pred eEEecCCCCCCC--C-CEEeCCCCcEEcHHHHHHHHHhCCCCcCCcCCCChhhcE
Confidence 468999999993 4 5555 8999999999999999888899999999877653
No 66
>1wim_A KIAA0161 protein; ring finger domain, UBCM4-interacting protein 4, UIP4, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=98.46 E-value=5.8e-08 Score=78.25 Aligned_cols=48 Identities=23% Similarity=0.654 Sum_probs=37.1
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhc--------CCCCCC--Cccc
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR--------SSQCPM--CWQP 78 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~--------~~sCP~--CR~~ 78 (386)
.+.+|+||++.+...+...+++|+|.||..||..|+.. ...||. |+..
T Consensus 4 ~~~~C~IC~~~~~~~~~~~l~~CgH~FC~~Cl~~~~~~~i~~g~~~~i~CP~~~C~~~ 61 (94)
T 1wim_A 4 GSSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQ 61 (94)
T ss_dssp SBCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTCSSC
T ss_pred CCcCCcccCcccccccceEcCCCCCcccHHHHHHHHHHHhhcCCcccccCccccCCCC
Confidence 47889999999844222333579999999999999863 136999 9988
No 67
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=98.44 E-value=3.8e-08 Score=77.67 Aligned_cols=43 Identities=28% Similarity=0.624 Sum_probs=36.7
Q ss_pred CcccccccccccCCCCeeecccCCc-ccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHE-FHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~-FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
+..|+||++.+.+ +..++|||. ||..|+..| ..||+||..+..
T Consensus 18 ~~~C~IC~~~~~~---~v~~pCgH~~~C~~C~~~~----~~CP~Cr~~i~~ 61 (79)
T 2yho_A 18 AMLCMVCCEEEIN---STFCPCGHTVCCESCAAQL----QSCPVCRSRVEH 61 (79)
T ss_dssp HTBCTTTSSSBCC---EEEETTCBCCBCHHHHTTC----SBCTTTCCBCCE
T ss_pred CCEeEEeCcccCc---EEEECCCCHHHHHHHHHhc----CcCCCCCchhhC
Confidence 6789999999733 677899999 999999877 399999998764
No 68
>3k1l_B Fancl; UBC, ring, RWD, ligase; HET: MAL CIT; 3.20A {Drosophila melanogaster}
Probab=98.33 E-value=9.8e-08 Score=94.74 Aligned_cols=53 Identities=26% Similarity=0.612 Sum_probs=40.4
Q ss_pred CCCCcccccccccccCCCC-e----eecccCCcccHHHHHHHHhcC-----------CCCCCCcccCCC
Q 016624 29 DSCDDACSICLEEFSESDP-S----TVTSCKHEFHLQCVLEWCQRS-----------SQCPMCWQPISL 81 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~-~----~vlpCgH~FC~~CI~~Wlq~~-----------~sCP~CR~~i~~ 81 (386)
++...+|+||++.+.+... + .-+.|+|.||..||.+|++.. ..||+||++|..
T Consensus 305 ee~~~ECaICys~~l~~g~lPdk~C~n~~C~h~FH~~CL~kWLrs~~~sRqSFnvi~G~CPyCr~pIs~ 373 (381)
T 3k1l_B 305 DNEELRCNICFAYRLDGGEVPLVSCDNAKCVLKCHAVCLEEWFKTLMDGKTFLEVSFGQCPFCKAKLST 373 (381)
T ss_dssp CCSCCSCSSSCCSSCTTCCCCCBCCSCTTCCCCBCSGGGHHHHHHHHSSSCTTTCCEEECTTTCCEEEG
T ss_pred ccCCccCcccceeecCCCCCccccccCCccCCccchHHHHHHHHhCCCccccccccCCCCCCCCCcCCc
Confidence 3456789999999865222 2 125899999999999999752 359999998764
No 69
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=98.31 E-value=4.8e-07 Score=68.05 Aligned_cols=51 Identities=24% Similarity=0.570 Sum_probs=40.1
Q ss_pred CCCCCcccccccccccCCCCeeecccC--C---cccHHHHHHHHhc--CCCCCCCcccCCC
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCK--H---EFHLQCVLEWCQR--SSQCPMCWQPISL 81 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCg--H---~FC~~CI~~Wlq~--~~sCP~CR~~i~~ 81 (386)
+++++..|.||++.. +++ .++||. + .||..||..|+.. +..||+|+..+..
T Consensus 2 e~~~~~~CrIC~~~~--~~~-l~~PC~C~gs~~~~H~~Cl~~W~~~~~~~~C~~C~~~~~~ 59 (60)
T 1vyx_A 2 EDEDVPVCWICNEEL--GNE-RFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp TTCSCCEETTTTEEC--SCC-CCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCCCEeEEeecCC--CCc-eecCcCCCCchhhhHHHHHHHHHHhCCCCccCCCCCeeec
Confidence 456788999999985 333 357865 4 9999999999974 5689999998764
No 70
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=98.29 E-value=1.2e-07 Score=94.26 Aligned_cols=43 Identities=21% Similarity=0.623 Sum_probs=37.4
Q ss_pred CcccccccccccCCCCeeecccCCc-ccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHE-FHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~-FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
+..|+||++.+.+ ++.++|+|. ||..|+..| ..||+||..+..
T Consensus 295 ~~~C~IC~~~~~~---~v~lpCgH~~fC~~C~~~~----~~CP~CR~~i~~ 338 (345)
T 3t6p_A 295 ERTCKVCMDKEVS---VVFIPCGHLVVCQECAPSL----RKCPICRGIIKG 338 (345)
T ss_dssp TCBCTTTSSSBCC---EEEETTCCEEECTTTGGGC----SBCTTTCCBCCE
T ss_pred CCCCCccCCcCCc---eEEcCCCChhHhHHHHhcC----CcCCCCCCCccC
Confidence 6899999999833 677799999 999999988 789999998864
No 71
>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}
Probab=97.93 E-value=4.8e-06 Score=68.91 Aligned_cols=46 Identities=24% Similarity=0.569 Sum_probs=38.5
Q ss_pred ccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCC
Q 016624 34 ACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISL 81 (386)
Q Consensus 34 ~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~ 81 (386)
.|++|--.+ ....++.||+|.||..|+..|.+. .+.||.|+.++..
T Consensus 3 fC~~C~~Pi--~iygRmIPCkHvFCydCa~~~~~~~~k~Cp~C~~~V~r 49 (101)
T 3vk6_A 3 FCDKCGLPI--KVYGRMIPCKHVFCYDCAILHEKKGDKMCPGCSDPVQR 49 (101)
T ss_dssp BCTTTCSBC--SEEEEEETTCCEEEHHHHHHHHHTTCCBCTTTCCBCSE
T ss_pred ecCccCCCe--EEEeeeccccccHHHHHHHHHHhccCCCCcCcCCeeee
Confidence 488898887 344678899999999999999865 6789999998864
No 72
>3nw0_A Non-structural maintenance of chromosomes element homolog; E3 ligase, Zn, metal binding protein; 2.92A {Homo sapiens}
Probab=97.47 E-value=7.4e-05 Score=70.50 Aligned_cols=50 Identities=24% Similarity=0.583 Sum_probs=41.1
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCC--CCCCCcccCCCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSS--QCPMCWQPISLKD 83 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~--sCP~CR~~i~~~d 83 (386)
-..|.||.+.+..+ .....|+|.||..|+..|++.+. .||.|+..|....
T Consensus 180 i~~C~iC~~iv~~g--~~C~~C~~~~H~~C~~~~~~~~~~~~CP~C~~~W~~~~ 231 (238)
T 3nw0_A 180 VKICNICHSLLIQG--QSCETCGIRMHLPCVAKYFQSNAEPRCPHCNDYWPHEI 231 (238)
T ss_dssp CCBCTTTCSBCSSC--EECSSSCCEECHHHHHHHTTTCSSCBCTTTCCBCCSCC
T ss_pred CCcCcchhhHHhCC--cccCccChHHHHHHHHHHHHhCCCCCCCCCCCCCCCCC
Confidence 56899999998543 45556999999999999998654 8999999887654
No 73
>2ko5_A Ring finger protein Z; lassa fever virus-Z, negative regulator of EIF4E, cytoplasm, HOST-virus interaction, lipoprotein, membrane; NMR {Lassa virus josiah}
Probab=95.48 E-value=0.0052 Score=50.27 Aligned_cols=47 Identities=28% Similarity=0.543 Sum_probs=38.2
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
-..|..|+-..+ ..+.-..|.+|..||...+..+..||+|+.+|..+
T Consensus 28 ~~nCKsCWf~~k----~LV~C~dHYLCl~CLtlmL~~SdrCpIC~~pLPtk 74 (99)
T 2ko5_A 28 PQFCKSCWFENK----GLVECNNHYLCLNCLTLLLSVSNRCPICKMPLPTK 74 (99)
T ss_dssp CCCCCSSCSCCS----SEEECSSCEEEHHHHHHTCSSSSEETTTTEECCCC
T ss_pred cccChhhccccC----CeeeecchhhHHHHHHHHHhhccCCcccCCcCCcc
Confidence 457999998862 23323459999999999999999999999998865
No 74
>2jun_A Midline-1; B-BOX, TRIM, ring finger, alternative splicing, coiled coil, cytoplasm, cytoskeleton, disease mutation, ligase, metal-binding; NMR {Homo sapiens}
Probab=95.24 E-value=0.012 Score=47.32 Aligned_cols=35 Identities=17% Similarity=0.418 Sum_probs=26.0
Q ss_pred CCcccccccccccCCCCe-eecccCCcccHHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPS-TVTSCKHEFHLQCVLEWC 66 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~-~vlpCgH~FC~~CI~~Wl 66 (386)
++..|.||++.+.. +++ ..+.|+|.||..|+..|.
T Consensus 2 ee~~C~~C~~~~~~-~av~~C~~C~~~~C~~Cl~~~h 37 (101)
T 2jun_A 2 EKVLCQFCDQDPAQ-DAVKTCVTCEVSYCDECLKATH 37 (101)
T ss_dssp CCCBCTTCCSSSCC-BCCEEETTTTEEECHHHHHHHS
T ss_pred CCCCCcCCCCCCCC-CceEECCcCChHHhHHHCHHHh
Confidence 47899999986421 222 238999999999999843
No 75
>2lri_C Autoimmune regulator; Zn binding protein domain, apeced, transcription; NMR {Homo sapiens}
Probab=91.88 E-value=0.12 Score=39.27 Aligned_cols=54 Identities=22% Similarity=0.485 Sum_probs=37.9
Q ss_pred hhcCCCCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC----CCCCCCcccC
Q 016624 23 VEGGIQDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCWQPI 79 (386)
Q Consensus 23 v~~~iqde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR~~i 79 (386)
++++.....+..|.||.+. ++-+..-.|...||..|+...+... -.||.|....
T Consensus 3 ~E~~~~~~~~~~C~vC~~~---~~ll~Cd~C~~~~H~~Cl~P~l~~~P~g~W~C~~C~~~~ 60 (66)
T 2lri_C 3 MEGQQNLAPGARCGVCGDG---TDVLRCTHCAAAFHWRCHFPAGTSRPGTGLRCRSCSGDV 60 (66)
T ss_dssp CTTTTCCCTTCCCTTTSCC---TTCEECSSSCCEECHHHHCTTTCCCCSSSCCCTTTTTCC
T ss_pred cccccCCCCCCCcCCCCCC---CeEEECCCCCCceecccCCCccCcCCCCCEECccccCCC
Confidence 3444445557789999865 3434446788999999998777553 3699997643
No 76
>3m62_A Ubiquitin conjugation factor E4; armadillo-like repeats, UBL conjugation pathway, DNA damage, nucleus, phosphoprotein; HET: 1PE; 2.40A {Saccharomyces cerevisiae} PDB: 3m63_A* 2qiz_A 2qj0_A
Probab=91.15 E-value=0.18 Score=55.94 Aligned_cols=61 Identities=15% Similarity=0.151 Sum_probs=50.2
Q ss_pred CCCcccccccccccCCCCeeecccC-CcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHH
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCK-HEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAV 93 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCg-H~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~v 93 (386)
-++..|||-++.+. | |++++.| +.|-..+|..|+..+.+||+=|.++...++.++..+...
T Consensus 889 P~~F~cPIs~~lM~--D-PVilpsG~~TydR~~I~~wl~~~~tdP~Tr~~L~~~~liPN~~Lk~~ 950 (968)
T 3m62_A 889 PDEFLDPLMYTIMK--D-PVILPASKMNIDRSTIKAHLLSDSTDPFNRMPLKLEDVTPNEELRQK 950 (968)
T ss_dssp CGGGBCTTTCSBCS--S-EEECTTTCCEEEHHHHHHHHTTCCBCTTTCCBCCGGGCEECHHHHHH
T ss_pred cHHhCCcchhhHHh--C-CeEcCCCCEEECHHHHHHHHhcCCCCCCCCCCCCcccccccHHHHHH
Confidence 34778999999983 3 6667887 689999999999999999999999998887777655443
No 77
>3i2d_A E3 SUMO-protein ligase SIZ1; signal transduction, replication, ring E3, PIAS, ubiquitin, UBC9, metal-binding, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=88.33 E-value=0.34 Score=48.39 Aligned_cols=61 Identities=25% Similarity=0.447 Sum_probs=44.6
Q ss_pred CcccccccccccCCCCeeecccCCcccHHH--HHHHHhcC--CCCCCCcccCCCCCcchHHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQC--VLEWCQRS--SQCPMCWQPISLKDATSQELLEAVE 94 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~C--I~~Wlq~~--~sCP~CR~~i~~~d~~~~~lle~ve 94 (386)
.+.|||-+..| ..|++-..|.|.-|++- ++.+..+. -.||+|.+.+...++.....+..+.
T Consensus 249 SL~CPlS~~ri--~~PvRg~~C~HlQCFDl~sfL~~~~~~~~W~CPIC~k~~~~~dL~ID~~~~~IL 313 (371)
T 3i2d_A 249 SLQCPISYTRM--KYPSKSINCKHLQCFDALWFLHSQLQIPTWQCPVCQIDIALENLAISEFVDDIL 313 (371)
T ss_dssp ESBCTTTSSBC--SSEEEETTCCSSCCEEHHHHHHHHHHSCCCBCTTTCCBCCGGGEEEBHHHHHHH
T ss_pred eecCCCccccc--cccCcCCcCCCcceECHHHHHHHhhcCCceeCCCCCcccCHHHeeEcHHHHHHH
Confidence 45799888887 56788889999866543 44443333 4699999999999888777766554
No 78
>4fo9_A E3 SUMO-protein ligase PIAS2; E3 ligase, pinit domain, SP-ring domain, structural GE consortium, SGC; 2.39A {Homo sapiens} PDB: 2asq_B
Probab=87.22 E-value=0.48 Score=47.19 Aligned_cols=61 Identities=15% Similarity=0.309 Sum_probs=44.4
Q ss_pred CcccccccccccCCCCeeecccCCcccH--HHHHHHHhcC--CCCCCCcccCCCCCcchHHHHHHHH
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHL--QCVLEWCQRS--SQCPMCWQPISLKDATSQELLEAVE 94 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~--~CI~~Wlq~~--~sCP~CR~~i~~~d~~~~~lle~ve 94 (386)
.+.|||-+..+ ..|++...|.|.-|+ .-+..+..+. -.||+|.+.+...++.....+..+.
T Consensus 215 SL~CPlS~~ri--~~P~Rg~~C~HlqCFDl~sfL~~~~~~~~W~CPiC~k~~~~~dL~ID~~~~~IL 279 (360)
T 4fo9_A 215 SLMCPLGKMRL--TIPCRAVTCTHLQCFDAALYLQMNEKKPTWICPVCDKKAAYESLILDGLFMEIL 279 (360)
T ss_dssp ESBCTTTCSBC--SSEEEETTCCCCCCEEHHHHHHHHHHSCCCBCTTTCSBCCGGGEEEBHHHHHHH
T ss_pred eeeCCCcccee--ccCCcCCCCCCCccCCHHHHHHHHhhCCCeECCCCCcccCHHHeEEcHHHHHHH
Confidence 34699888887 567888899998554 3444444433 3699999999999888777666654
No 79
>2l5u_A Chromodomain-helicase-DNA-binding protein 4; CHD4, MI2B, MI2-beta, PHD, protein binding, peptide binding metal binding protein; NMR {Homo sapiens}
Probab=83.97 E-value=0.46 Score=35.18 Aligned_cols=50 Identities=20% Similarity=0.598 Sum_probs=34.8
Q ss_pred cCCCCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCcc
Q 016624 25 GGIQDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQ 77 (386)
Q Consensus 25 ~~iqde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~ 77 (386)
....+..+..|.||... ++-+..-.|...||..|+..-+.. .-.||.|..
T Consensus 4 ~~~~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~p~l~~~p~g~W~C~~C~~ 57 (61)
T 2l5u_A 4 GSYETDHQDYCEVCQQG---GEIILCDTCPRAYHMVCLDPDMEKAPEGKWSCPHCEK 57 (61)
T ss_dssp SCCSSCCCSSCTTTSCC---SSEEECSSSSCEEEHHHHCTTCCSCCCSSCCCTTGGG
T ss_pred CcccCCCCCCCccCCCC---CcEEECCCCChhhhhhccCCCCCCCCCCceECccccc
Confidence 34566678899999874 222333568889999999875433 236999965
No 80
>2cs3_A Protein C14ORF4, MY039 protein; ZF-C3HC4 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.3
Probab=82.08 E-value=1.7 Score=34.64 Aligned_cols=40 Identities=25% Similarity=0.444 Sum_probs=28.5
Q ss_pred CCCCcccccccccccCCCCeeecc-cCCcccHHHHHHHHhc
Q 016624 29 DSCDDACSICLEEFSESDPSTVTS-CKHEFHLQCVLEWCQR 68 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlp-CgH~FC~~CI~~Wlq~ 68 (386)
+...+.|.+|.+-|.+..-+.... =.|.||+.|-...++.
T Consensus 12 ~~a~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sIk~ 52 (93)
T 2cs3_A 12 NSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKA 52 (93)
T ss_dssp SCCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCCeeEeecchhhhccCceeeCCCccCCeeeccccHHHHHh
Confidence 345789999999995533222211 2599999999999875
No 81
>1weo_A Cellulose synthase, catalytic subunit (IRX3); structure genomics, ring-finger, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: g.44.1.1
Probab=80.36 E-value=2.8 Score=33.88 Aligned_cols=54 Identities=15% Similarity=0.334 Sum_probs=37.7
Q ss_pred CCCCCCcccccccccccCCC--C--eeecccCCcccHHHHHHHH-hcCCCCCCCcccCC
Q 016624 27 IQDSCDDACSICLEEFSESD--P--STVTSCKHEFHLQCVLEWC-QRSSQCPMCWQPIS 80 (386)
Q Consensus 27 iqde~d~~C~ICle~f~~~d--~--~~vlpCgH~FC~~CI~~Wl-q~~~sCP~CR~~i~ 80 (386)
+.......|.||-+.+.... . +..-.|.--.|..|+.-=. ...+.||.|+..+.
T Consensus 11 ~~~~~~qiCqiCGD~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCktrYk 69 (93)
T 1weo_A 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp CSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred ccccCCCccccccCccccCCCCCEEEeeeccCChhhHHHHHHHHhccCccccccCCccc
Confidence 34445678999999863221 1 3345788889999987443 45788999988765
No 82
>1we9_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=79.72 E-value=0.27 Score=36.45 Aligned_cols=50 Identities=22% Similarity=0.481 Sum_probs=33.3
Q ss_pred CCCCcccccccccccCCCCe-eecccCCcccHHHHHHHHh-----cCCCCCCCccc
Q 016624 29 DSCDDACSICLEEFSESDPS-TVTSCKHEFHLQCVLEWCQ-----RSSQCPMCWQP 78 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~-~vlpCgH~FC~~CI~~Wlq-----~~~sCP~CR~~ 78 (386)
++++..|+||...+.+.... ..-.|...||..|+.--.. ....||.|+..
T Consensus 3 ~~e~~~C~~C~~~~~~~~~mI~Cd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~k 58 (64)
T 1we9_A 3 SGSSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp CSSCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCCCCCCCCCCccCCCCCEEEccCCCCCCCccccCcChhHhcCCCcEECCCCcCc
Confidence 34577899999887432322 2356888999999754322 34579999653
No 83
>3o36_A Transcription intermediary factor 1-alpha; TRIM24, PHD finger, bromodomain, H4K16 acetylation, breast C transcription-protein binding complex; HET: ALY; 1.70A {Homo sapiens} PDB: 3o33_A* 3o34_A* 3o35_A* 3o37_A
Probab=77.89 E-value=0.46 Score=42.26 Aligned_cols=47 Identities=21% Similarity=0.505 Sum_probs=33.5
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC----CCCCCCcccC
Q 016624 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCWQPI 79 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR~~i 79 (386)
..++.|.||.+. ++-+..-.|...||..|+...+... -.||.|+...
T Consensus 2 ~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~ 52 (184)
T 3o36_A 2 PNEDWCAVCQNG---GELLCCEKCPKVFHLSCHVPTLTNFPSGEWICTFCRDLS 52 (184)
T ss_dssp CSCSSCTTTCCC---SSCEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCccccCCCC---CeeeecCCCCcccCccccCCCCCCCCCCCEECccccCcc
Confidence 357889999865 3434445688999999987655432 3699997654
No 84
>1fp0_A KAP-1 corepressor; PHD domain, C3HC4 type zinc binding domain, -structure, transcription; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=76.21 E-value=0.99 Score=36.23 Aligned_cols=52 Identities=27% Similarity=0.533 Sum_probs=36.3
Q ss_pred cCCCCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC----CCCCCCcccC
Q 016624 25 GGIQDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCWQPI 79 (386)
Q Consensus 25 ~~iqde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR~~i 79 (386)
....+..+..|.||... ++-+..-.|.-.||..|+..-+... -.||.|...-
T Consensus 18 ~~~~d~n~~~C~vC~~~---g~LL~CD~C~~~fH~~Cl~PpL~~~P~g~W~C~~C~~~~ 73 (88)
T 1fp0_A 18 FGTLDDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLP 73 (88)
T ss_dssp CCSSSSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCC
T ss_pred ccccCCCCCcCcCcCCC---CCEEECCCCCCceecccCCCCCCCCcCCCcCCccccCCC
Confidence 34456678899999975 3334445688899999997655432 3699997543
No 85
>2k16_A Transcription initiation factor TFIID subunit 3; protein, alternative splicing, metal-binding, nucleus, phosphoprotein, transcription regulation; NMR {Mus musculus} PDB: 2k17_A*
Probab=75.57 E-value=0.63 Score=35.48 Aligned_cols=50 Identities=22% Similarity=0.369 Sum_probs=32.5
Q ss_pred CCCcccccccccccCCCC-eeecccCCcccHHHHHHHHh----cCCCCCCCcccCC
Q 016624 30 SCDDACSICLEEFSESDP-STVTSCKHEFHLQCVLEWCQ----RSSQCPMCWQPIS 80 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~Wlq----~~~sCP~CR~~i~ 80 (386)
.+...|.||..... +.. +..-.|...||..|+..-.. ....||.|...+.
T Consensus 16 ~~~~~C~~C~~~~~-~~~mi~CD~C~~wfH~~Cv~~~~~~~~~~~w~C~~C~~~~~ 70 (75)
T 2k16_A 16 NQIWICPGCNKPDD-GSPMIGCDDCDDWYHWPCVGIMAAPPEEMQWFCPKCANKIK 70 (75)
T ss_dssp CEEECBTTTTBCCS-SCCEEECSSSSSEEEHHHHTCSSCCCSSSCCCCTTTHHHHC
T ss_pred CCCcCCCCCCCCCC-CCCEEEcCCCCcccccccCCCCccCCCCCCEEChhccCchh
Confidence 34557999988742 222 22346888999999875443 2346999976543
No 86
>1xwh_A Autoimmune regulator; PHD domain, Zn binding domain, apeced, nucleosome, E3 ligase, transcription; NMR {Homo sapiens} PDB: 2ke1_A 2kft_A
Probab=75.45 E-value=0.37 Score=36.21 Aligned_cols=50 Identities=22% Similarity=0.624 Sum_probs=34.1
Q ss_pred CCCCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCccc
Q 016624 26 GIQDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQP 78 (386)
Q Consensus 26 ~iqde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~~ 78 (386)
+..+..+..|.||.+. ++-+..-.|...||..|+..-+.. .-.||.|...
T Consensus 2 ~~~~~~~~~C~vC~~~---g~ll~CD~C~~~fH~~Cl~ppl~~~P~g~W~C~~C~~~ 55 (66)
T 1xwh_A 2 AMAQKNEDECAVCRDG---GELICCDGCPRAFHLACLSPPLREIPSGTWRCSSCLQA 55 (66)
T ss_dssp CCCCSCCCSBSSSSCC---SSCEECSSCCCEECTTTSSSCCSSCCSSCCCCHHHHHT
T ss_pred CcCCCCCCCCccCCCC---CCEEEcCCCChhhcccccCCCcCcCCCCCeECccccCc
Confidence 3456678899999975 333444578889999998754432 2359988543
No 87
>2lbm_A Transcriptional regulator ATRX; metal binding protein-structural protein compl; HET: M3L; NMR {Homo sapiens} PDB: 2ld1_A
Probab=75.05 E-value=2.5 Score=36.70 Aligned_cols=46 Identities=24% Similarity=0.561 Sum_probs=33.0
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHh-----------cCCCCCCCcc
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQ-----------RSSQCPMCWQ 77 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq-----------~~~sCP~CR~ 77 (386)
|..++.|.||.+- ++-.-.-.|-..||..||..-+. ..-.||+|..
T Consensus 60 Dg~~d~C~vC~~G---G~LlcCD~Cpr~Fh~~Cl~p~l~~~~l~~i~~p~~~W~C~~C~~ 116 (142)
T 2lbm_A 60 DGMDEQCRWCAEG---GNLICCDFCHNAFCKKCILRNLGRKELSTIMDENNQWYCYICHP 116 (142)
T ss_dssp TSCBCSCSSSCCC---SSEEECSSSCCEEEHHHHHHHTCHHHHHHHHTSTTCCCCTTTCC
T ss_pred CCCCCeecccCCC---CcEEeCCCCCCeeeHhhcCCCCChhhhhhcccCCCCCEeecccC
Confidence 5568899999986 33233346888999999996552 1236999974
No 88
>3u5n_A E3 ubiquitin-protein ligase TRIM33; TRIM33, PHD, bromodomain, TGF-beta, epigenetics, methylation, K9ME3, K14AC, transcription; HET: M3L ALY; 1.95A {Homo sapiens} PDB: 3u5m_A* 3u5o_A* 3u5p_A*
Probab=74.83 E-value=0.4 Score=43.59 Aligned_cols=49 Identities=24% Similarity=0.500 Sum_probs=33.7
Q ss_pred CCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC----CCCCCCcccC
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCWQPI 79 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR~~i 79 (386)
++..+..|.||... ++-+..-.|...||..|+...+... -.||.|+..-
T Consensus 3 ~d~~~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~~~W~C~~C~~~~ 55 (207)
T 3u5n_A 3 DDPNEDWCAVCQNG---GDLLCCEKCPKVFHLTCHVPTLLSFPSGDWICTFCRDIG 55 (207)
T ss_dssp CCSSCSSBTTTCCC---EEEEECSSSSCEECTTTSSSCCSSCCSSCCCCTTTSCSS
T ss_pred CCCCCCCCCCCCCC---CceEEcCCCCCccCCccCCCCCCCCCCCCEEeCceeCcc
Confidence 35567889999865 2223334688899999987665432 3699997653
No 89
>1mm2_A MI2-beta; PHD, zinc finger, protein scaffold, DNA binding protein; NMR {Homo sapiens} SCOP: g.50.1.2 PDB: 2l75_A* 1mm3_A
Probab=74.65 E-value=0.61 Score=34.49 Aligned_cols=48 Identities=21% Similarity=0.567 Sum_probs=32.6
Q ss_pred CCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCccc
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQP 78 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~~ 78 (386)
++..+..|.||.+. ++-+..-.|...||..|+..-+.. .-.||.|...
T Consensus 5 ~d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 56 (61)
T 1mm2_A 5 SDHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred ccCCCCcCCCCCCC---CCEEEcCCCCHHHcccccCCCcCcCCCCccCChhhcCc
Confidence 34567889999864 233334568889999998754433 2359999654
No 90
>2ysm_A Myeloid/lymphoid or mixed-lineage leukemia protein 3 homolog; PHD domain, histone-lysine N-methyltransferase, H3 lysine-4 specific MLL3; NMR {Homo sapiens}
Probab=71.07 E-value=1.1 Score=36.50 Aligned_cols=49 Identities=24% Similarity=0.434 Sum_probs=32.5
Q ss_pred CCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCc
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCW 76 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR 76 (386)
.+..++.|.||.+.-...+-+.-..|...||..||...+.. .-.||.|+
T Consensus 3 ~~~~~~~C~~C~~~g~~~~ll~C~~C~~~~H~~Cl~~~~~~~~~~~W~C~~C~ 55 (111)
T 2ysm_A 3 SGSSGANCAVCDSPGDLLDQFFCTTCGQHYHGMCLDIAVTPLKRAGWQCPECK 55 (111)
T ss_dssp CCCCCSCBTTTCCCCCTTTSEECSSSCCEECTTTTTCCCCTTTSTTCCCTTTC
T ss_pred CCCCCCCCcCCCCCCCCcCCeECCCCCCCcChHHhCCccccccccCccCCcCC
Confidence 45568899999887321122455688999999999876542 22466553
No 91
>1wil_A KIAA1045 protein; ring finger domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: g.50.1.3
Probab=67.79 E-value=3.6 Score=32.96 Aligned_cols=34 Identities=21% Similarity=0.429 Sum_probs=22.9
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHH
Q 016624 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEW 65 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~W 65 (386)
.|..|.||-..- ..+-.-.--|+-.||..||.+.
T Consensus 14 ~D~~C~VC~~~t-~~~l~pCRvC~RvfH~~CL~r~ 47 (89)
T 1wil_A 14 NDEMCDVCEVWT-AESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CSCCCTTTCCCC-SSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCcccCcccccc-ccceeccccccccccHhhcccc
Confidence 588999997432 1111122348899999999986
No 92
>1wem_A Death associated transcription factor 1; structural genomics, PHD domain, death inducer- obliterator 1(DIO-1); NMR {Mus musculus} SCOP: g.50.1.2
Probab=67.34 E-value=1.5 Score=33.57 Aligned_cols=49 Identities=24% Similarity=0.352 Sum_probs=30.9
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHH---------hcCCCCCCCccc
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWC---------QRSSQCPMCWQP 78 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wl---------q~~~sCP~CR~~ 78 (386)
|.+...| ||........-+..-.|...||..|+.--. .....||.|+..
T Consensus 13 d~~~~~C-~C~~~~~~~~MI~Cd~C~~WfH~~Cvgl~~~~~~~l~~~~~~~~C~~C~~~ 70 (76)
T 1wem_A 13 DPNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CTTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred CCCCCEE-ECCCccCCCCEEEeCCCCCcEeCeEEccchhhhhhccCCCCeEECcCCcCc
Confidence 3345667 899886321112235688999999984221 246789999654
No 93
>1f62_A Transcription factor WSTF; Zn-finger; NMR {Homo sapiens} SCOP: g.50.1.2
Probab=65.02 E-value=3 Score=29.22 Aligned_cols=44 Identities=25% Similarity=0.587 Sum_probs=28.0
Q ss_pred ccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCcc
Q 016624 34 ACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQ 77 (386)
Q Consensus 34 ~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~ 77 (386)
.|.||...-...+-+.--.|...||..|+..=+.. .-.||.|+.
T Consensus 2 ~C~vC~~~~~~~~ll~Cd~C~~~~H~~Cl~p~l~~~P~g~W~C~~C~~ 49 (51)
T 1f62_A 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCCCCCCCCCCCCEEECCCCChhhCcccCCCCcCCCCCCcEECcCccc
Confidence 48888865322222334578889999999654432 235999964
No 94
>2yql_A PHD finger protein 21A; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=64.92 E-value=0.54 Score=34.07 Aligned_cols=45 Identities=24% Similarity=0.586 Sum_probs=30.5
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC----CCCCCCc
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCW 76 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR 76 (386)
+..+..|.||... ++-+..-.|...||..|+..-+... -.||.|.
T Consensus 6 ~~~~~~C~vC~~~---g~ll~Cd~C~~~~H~~Cl~ppl~~~p~g~W~C~~C~ 54 (56)
T 2yql_A 6 SGHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQ 54 (56)
T ss_dssp CSSCCSCSSSCCS---SCCEECSSSSCEECSSSSSSCCCSCCCSSCCCHHHH
T ss_pred CCCCCCCccCCCC---CeEEEcCCCCcceECccCCCCcCCCCCCceEChhhh
Confidence 4457889999975 3334445788899999987544322 2477774
No 95
>1wep_A PHF8; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Mus musculus} SCOP: g.50.1.2
Probab=64.33 E-value=4.1 Score=31.31 Aligned_cols=49 Identities=20% Similarity=0.362 Sum_probs=31.1
Q ss_pred CCCcccccccccccCCCC-eeecccCCcccHHHHHHHHh-----cCCCCCCCcccC
Q 016624 30 SCDDACSICLEEFSESDP-STVTSCKHEFHLQCVLEWCQ-----RSSQCPMCWQPI 79 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~Wlq-----~~~sCP~CR~~i 79 (386)
.+...| ||...+.+... +..-.|...||..|+.--.. ....||.|+...
T Consensus 10 ~~~~~C-~C~~~~d~~~~MIqCd~C~~WfH~~Cvgl~~~~~~~~~~~~C~~C~~~~ 64 (79)
T 1wep_A 10 LVPVYC-LCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCCCS-TTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CCccEE-EcCCccCCCCceEEcCCCCCcEEeeecCcccccccCCCeEECCCccccc
Confidence 345566 99887632222 23356889999999853221 346799997653
No 96
>2ri7_A Nucleosome-remodeling factor subunit BPTF; zinc finger, alpha-helical bundle, dimethyl-lysine, bromodom chromatin regulator, metal-binding, nucleus; HET: MLY; 1.45A {Homo sapiens} PDB: 2fsa_A* 2f6n_A 2f6j_A* 3qzv_A* 3uv2_A* 3qzt_A* 3qzs_A* 2fui_A 2fuu_A*
Probab=63.60 E-value=1.5 Score=38.43 Aligned_cols=51 Identities=24% Similarity=0.392 Sum_probs=30.6
Q ss_pred CCCCCCCcccccccccccCCCC-eeecccCCcccHHHHHHHH-----hcCCCCCCCcc
Q 016624 26 GIQDSCDDACSICLEEFSESDP-STVTSCKHEFHLQCVLEWC-----QRSSQCPMCWQ 77 (386)
Q Consensus 26 ~iqde~d~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~Wl-----q~~~sCP~CR~ 77 (386)
.+.++++..| ||.....+... +..-.|...||..|+.--. .....||.|+.
T Consensus 2 ~~~~~~~~~C-~C~~~~~~~~~mi~Cd~C~~WfH~~Cv~~~~~~~~~~~~~~C~~C~~ 58 (174)
T 2ri7_A 2 PLGSDTKLYC-ICKTPEDESKFYIGCDRCQNWYHGRCVGILQSEAELIDEYVCPQCQS 58 (174)
T ss_dssp -----CCEET-TTTEECCTTSCEEECTTTCCEEEHHHHTCCHHHHTTCSSCCCHHHHH
T ss_pred CCCCCCCcEe-eCCCCCCCCCCEeECCCCCchhChhhcCCchhhccCccCeecCCCcc
Confidence 3455667889 99987532222 2335688899999985321 12457999965
No 97
>2lv9_A Histone-lysine N-methyltransferase MLL5; zinc finger, transcription, protein binding, NESG, northeast structural genomics consortium, SGC; NMR {Homo sapiens}
Probab=63.59 E-value=2 Score=34.64 Aligned_cols=45 Identities=20% Similarity=0.308 Sum_probs=28.5
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhc---CCCCCCCcc
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR---SSQCPMCWQ 77 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~---~~sCP~CR~ 77 (386)
...| ||-.....+.-+..-.|...||..|+..-+.. ...||.|+.
T Consensus 28 ~vrC-iC~~~~~~~~mi~Cd~C~~w~H~~C~~~~~~~~p~~w~C~~C~~ 75 (98)
T 2lv9_A 28 VTRC-ICGFTHDDGYMICCDKCSVWQHIDCMGIDRQHIPDTYLCERCQP 75 (98)
T ss_dssp BCCC-TTSCCSCSSCEEEBTTTCBEEETTTTTCCTTSCCSSBCCTTTSS
T ss_pred CEEe-ECCCccCCCcEEEcCCCCCcCcCcCCCCCccCCCCCEECCCCcC
Confidence 4557 89776533222333568899999998643222 357999964
No 98
>1wew_A DNA-binding family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=63.53 E-value=1.6 Score=33.70 Aligned_cols=53 Identities=23% Similarity=0.423 Sum_probs=33.0
Q ss_pred hcCCCCCCCcccccccccccCCCCee-ec--ccCCcccHHHHHHHHh---------cCCCCCCCccc
Q 016624 24 EGGIQDSCDDACSICLEEFSESDPST-VT--SCKHEFHLQCVLEWCQ---------RSSQCPMCWQP 78 (386)
Q Consensus 24 ~~~iqde~d~~C~ICle~f~~~d~~~-vl--pCgH~FC~~CI~~Wlq---------~~~sCP~CR~~ 78 (386)
+..++..+...| ||-..... ..++ .- .|...||..|+.---. ....||.|+..
T Consensus 8 dd~~~~~~~~~C-iC~~~~~~-g~MI~CD~~~C~~W~H~~CVgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T 1wew_A 8 EDPFQPEIKVRC-VCGNSLET-DSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp CCSSSCCCCCCC-SSCCCCCC-SCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred ccccCCCCCEEe-ECCCcCCC-CCEEEECCccCCccccCEEEccccccccccccCCCCEECCCCCcc
Confidence 334455566778 89987422 2222 23 6889999999853221 24679999654
No 99
>1weu_A Inhibitor of growth family, member 4; structural genomics, PHD domain, ING1-like protein, DNA binding protein, NPPSFA; NMR {Mus musculus} SCOP: g.50.1.2
Probab=62.73 E-value=3.7 Score=32.97 Aligned_cols=53 Identities=21% Similarity=0.365 Sum_probs=30.7
Q ss_pred cCCCCCCCcccccccccccCCCCeeecc--cC-CcccHHHHHHHH--hcCCCCCCCcccC
Q 016624 25 GGIQDSCDDACSICLEEFSESDPSTVTS--CK-HEFHLQCVLEWC--QRSSQCPMCWQPI 79 (386)
Q Consensus 25 ~~iqde~d~~C~ICle~f~~~d~~~vlp--Cg-H~FC~~CI~~Wl--q~~~sCP~CR~~i 79 (386)
..++..+...| ||..... +.-+..-. |. ..||..|+.--. .....||.|+...
T Consensus 29 ~~~d~~e~~yC-iC~~~~~-g~MI~CD~~dC~~~WfH~~CVgl~~~p~g~W~Cp~C~~~~ 86 (91)
T 1weu_A 29 MPVDPNEPTYC-LCHQVSY-GEMIGCDNPDCSIEWFHFACVGLTTKPRGKWFCPRCSQES 86 (91)
T ss_dssp CCCCSCCCBCS-TTCCBCC-SCCCCCSCSSCSCCCCCSTTTTCSSCCCSSCCCTTTCCCC
T ss_pred CCcCCCCCcEE-ECCCCCC-CCEeEecCCCCCCCCEecccCCcCcCCCCCEECcCccCcC
Confidence 34445556677 9998641 22122223 55 689999986211 1235799997643
No 100
>3lqh_A Histone-lysine N-methyltransferase MLL; PHD finger, bromodomain, leukemia, apoptosis, chromati regulator, DNA-binding, isopeptide bond; 1.72A {Homo sapiens} PDB: 3lqi_A* 3lqj_A* 2kyu_A
Probab=62.59 E-value=1.9 Score=38.84 Aligned_cols=48 Identities=17% Similarity=0.380 Sum_probs=32.9
Q ss_pred cccccccccccCCCC---e-eecccCCcccHHHHHH------HHh-----cCCCCCCCcccCC
Q 016624 33 DACSICLEEFSESDP---S-TVTSCKHEFHLQCVLE------WCQ-----RSSQCPMCWQPIS 80 (386)
Q Consensus 33 ~~C~ICle~f~~~d~---~-~vlpCgH~FC~~CI~~------Wlq-----~~~sCP~CR~~i~ 80 (386)
..|+||...+.+.+. . ..-.|...||..|+.- -+. ....||.|+..-.
T Consensus 3 ~~CpiC~k~Y~~~~~~~~MIqCd~C~~W~H~~Cvgi~~~~~e~~~~~pe~~~y~Cp~C~~~~~ 65 (183)
T 3lqh_A 3 NFCPLCDKCYDDDDYESKMMQCGKCDRWVHSKCENLSDEMYEILSNLPESVAYTCVNCTERHP 65 (183)
T ss_dssp CBCTTTCCBCTTCCTTCCEEECTTTCCEEEGGGSSCCHHHHHHHHHSHHHHCCCCTTTCCSSS
T ss_pred CcCCCCcCccCCcccCCCeEECCCCCcccchhccccCHHHHHHhhcCCCCCeeECcCCCCCCC
Confidence 569999999865442 2 2356889999999642 111 2578999987543
No 101
>2puy_A PHD finger protein 21A; PHD finger, histone CODE, BRAF-HDAC complex, transcription; 1.43A {Homo sapiens}
Probab=58.97 E-value=1.1 Score=32.76 Aligned_cols=47 Identities=23% Similarity=0.529 Sum_probs=31.7
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCccc
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQP 78 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~~ 78 (386)
|..+..|.||... ++-+..-.|...||..|+..-+.. .-.||.|...
T Consensus 2 d~~~~~C~vC~~~---g~ll~Cd~C~~~fH~~Cl~ppl~~~p~g~W~C~~C~~~ 52 (60)
T 2puy_A 2 MIHEDFCSVCRKS---GQLLMCDTCSRVYHLDCLDPPLKTIPKGMWICPRCQDQ 52 (60)
T ss_dssp CCCCSSCTTTCCC---SSCEECSSSSCEECGGGSSSCCSSCCCSCCCCHHHHHH
T ss_pred CCCCCCCcCCCCC---CcEEEcCCCCcCEECCcCCCCcCCCCCCceEChhccCh
Confidence 3457889999875 333444578889999998754432 2258888543
No 102
>2d8v_A Zinc finger FYVE domain-containing protein 19; zfyve19, ZF- B_BOX, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.43.1.1
Probab=58.63 E-value=5.5 Score=30.37 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=26.0
Q ss_pred CCCCCcccccccccccCCCCeeeccc-CCcccHHHHHHH
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSC-KHEFHLQCVLEW 65 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpC-gH~FC~~CI~~W 65 (386)
.+++..-|.||.+.- ..+.+.| +-.||..|+.+.
T Consensus 4 ~~ee~pWC~ICneDA----tlrC~gCdgDLYC~rC~rE~ 38 (67)
T 2d8v_A 4 GSSGLPWCCICNEDA----TLRCAGCDGDLYCARCFREG 38 (67)
T ss_dssp SCCCCSSCTTTCSCC----CEEETTTTSEEECSSHHHHH
T ss_pred cCcCCCeeEEeCCCC----eEEecCCCCceehHHHHHHH
Confidence 345566799999984 2677889 789999997764
No 103
>1z60_A TFIIH basal transcription factor complex P44 subunit; basic transcription factor, zinc binding protein, ring finger; NMR {Homo sapiens} SCOP: g.49.1.2
Probab=58.49 E-value=3.4 Score=30.73 Aligned_cols=43 Identities=21% Similarity=0.508 Sum_probs=29.1
Q ss_pred cccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCC
Q 016624 33 DACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMC 75 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~C 75 (386)
..|--|...|.+...-....|++.||.+|=.-.-+.-..||-|
T Consensus 16 ~~C~~C~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh~CPgC 58 (59)
T 1z60_A 16 RFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CcccccCcccCCCccEECCccCcCcccchhHHHHhhccCCcCC
Confidence 4699999998432112357899999999943322344679988
No 104
>1wen_A Inhibitor of growth family, member 4; ING1-like protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.50.1.2 PDB: 1wes_A
Probab=54.43 E-value=5.6 Score=30.28 Aligned_cols=49 Identities=22% Similarity=0.426 Sum_probs=30.0
Q ss_pred CCCCCCCcccccccccccCCCCeee-cc--cC-CcccHHHHHHHHhc----CCCCCCCcccC
Q 016624 26 GIQDSCDDACSICLEEFSESDPSTV-TS--CK-HEFHLQCVLEWCQR----SSQCPMCWQPI 79 (386)
Q Consensus 26 ~iqde~d~~C~ICle~f~~~d~~~v-lp--Cg-H~FC~~CI~~Wlq~----~~sCP~CR~~i 79 (386)
.++..++..| ||.... ...++. -. |. ..||..|+. +.. ...||.|+...
T Consensus 10 ~~d~~~~~~C-~C~~~~--~g~MI~CD~~~C~~~wfH~~Cvg--l~~~p~g~w~Cp~C~~~~ 66 (71)
T 1wen_A 10 PVDPNEPTYC-LCHQVS--YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQES 66 (71)
T ss_dssp CCCTTSCCCS-TTCCCS--CSSEECCSCSSCSCCCEETTTTT--CSSCCSSCCCCTTTSSCS
T ss_pred ccCCCCCCEE-ECCCCC--CCCEeEeeCCCCCCccEecccCC--cCcCCCCCEECCCCCccc
Confidence 3445556778 898864 122221 23 65 589999986 322 34699997643
No 105
>2pv0_B DNA (cytosine-5)-methyltransferase 3-like; DNMT3L, unmethylated H3K4, de novo DNA methylation, transferase regulator; HET: DNA; 3.30A {Homo sapiens} PDB: 2pvc_B*
Probab=53.97 E-value=9.8 Score=38.13 Aligned_cols=65 Identities=15% Similarity=0.191 Sum_probs=40.4
Q ss_pred CCccchhhhHhhhhcCCCCCCCcccccccccccCCCCeeec--ccCCcccHHHHHHHHhc----------CCCCCCCccc
Q 016624 11 KPEDHMTSAAAFVEGGIQDSCDDACSICLEEFSESDPSTVT--SCKHEFHLQCVLEWCQR----------SSQCPMCWQP 78 (386)
Q Consensus 11 ~~~~~l~s~aa~v~~~iqde~d~~C~ICle~f~~~d~~~vl--pCgH~FC~~CI~~Wlq~----------~~sCP~CR~~ 78 (386)
....|...+....-.-.+|-.+..|.||-+-- +-...- .|...||..||..++-. .=.|-+|.-.
T Consensus 72 lC~~Ck~~y~~~~f~~D~DG~~~yCr~C~~Gg---~l~~Cdn~~C~r~FC~~Ci~~n~g~~~~~~i~~~d~W~Cf~C~p~ 148 (386)
T 2pv0_B 72 ICAPCKDKFLDALFLYDDDGYQSYCSICCSGE---TLLICGNPDCTRCYCFECVDSLVGPGTSGKVHAMSNWVCYLCLPS 148 (386)
T ss_dssp CCHHHHHHHHTTTTCBCSSSSBCSCTTTCCCS---SCEECCSTTCCCEECHHHHHHHTCTTHHHHHHHCSSCCCTTTSSC
T ss_pred hhhHHHHHHhccCcccCCCCCcccceEcCCCC---eEEEeCCCCCCcchHHHHHHHhcChhHHHHhhccCCceEEEcCCc
Confidence 33334444433333333455678999999862 323333 78899999999998732 2369999644
No 106
>2ro1_A Transcription intermediary factor 1-beta; KAP, TIF, PHD finger, bromodomain, SUMO, acetylation, alternative splicing, metal-binding, nucleus; NMR {Homo sapiens}
Probab=53.63 E-value=2.6 Score=37.79 Aligned_cols=44 Identities=27% Similarity=0.624 Sum_probs=30.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCccc
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQP 78 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~~ 78 (386)
+..|.+|.+. ++-+..-.|...||..|+..-+.. .-.||.|+..
T Consensus 2 ~~~C~~C~~~---g~ll~Cd~C~~~~H~~Cl~p~l~~~p~g~W~C~~C~~~ 49 (189)
T 2ro1_A 2 ATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVL 49 (189)
T ss_dssp CCCBTTTCCC---SSCCCCTTTCCBCCSTTSTTCCSSCCCTTCCTTTTSCS
T ss_pred CCcCccCCCC---CceeECCCCCchhccccCCCCcccCCCCCCCCcCccCC
Confidence 5689999966 333444568889999998654432 2369999765
No 107
>2vpb_A Hpygo1, pygopus homolog 1; gene regulation, WNT signaling pathway, WNT signaling complex, chromosomal rearrangement, signaling protein; 1.59A {Homo sapiens} PDB: 2vpd_A 2yyr_A* 2dx8_A* 2vp7_A 2vpg_A* 2vpe_A*
Probab=53.35 E-value=9.5 Score=28.50 Aligned_cols=35 Identities=26% Similarity=0.545 Sum_probs=23.0
Q ss_pred CCCCcccccccccccCCCCeee-c-ccCCcccHHHHH
Q 016624 29 DSCDDACSICLEEFSESDPSTV-T-SCKHEFHLQCVL 63 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~v-l-pCgH~FC~~CI~ 63 (386)
++....|++|...+.+....+. - .|...||..|+.
T Consensus 5 ~~~~~~C~~C~~p~~~~~~mI~CD~~C~~WfH~~Cvg 41 (65)
T 2vpb_A 5 SDPVYPCGICTNEVNDDQDAILCEASCQKWFHRICTG 41 (65)
T ss_dssp ----CBCTTTCSBCCTTSCEEEBTTTTCCEEEHHHHT
T ss_pred CCCcCcCccCCCccCCCCCeEecccCccccCchhccC
Confidence 3446689999999854443332 4 788999999964
No 108
>3ql9_A Transcriptional regulator ATRX; zinc finger, transcription, lysine trimethylation, protein, histone-binding protein, transcription-structural complex; HET: M3L; 0.93A {Homo sapiens} PDB: 3qla_A* 3qlc_A 3qln_A 2jm1_A
Probab=50.02 E-value=12 Score=31.97 Aligned_cols=46 Identities=24% Similarity=0.526 Sum_probs=30.8
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHH-----hc------CCCCCCCcc
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWC-----QR------SSQCPMCWQ 77 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wl-----q~------~~sCP~CR~ 77 (386)
|..+..|.||.+-- +-+---.|-..||..||..-+ .. .-.|++|.-
T Consensus 54 Dg~~~~C~vC~dGG---~LlcCd~Cpr~Fc~~Cl~~~lg~~~l~~i~~~~~~W~C~~C~~ 110 (129)
T 3ql9_A 54 DGMDEQCRWCAEGG---NLICCDFCHNAFCKKCILRNLGRRELSTIMDENNQWYCYICHP 110 (129)
T ss_dssp TSCBSSCTTTCCCS---EEEECSSSSCEEEHHHHHHHTCHHHHHHHTCTTSCCCCTTTCC
T ss_pred CCCCCcCeecCCCC---eeEecCCCchhhhHHHhCCCcchhHHHHhccCCCCeEcCCcCC
Confidence 45577899999762 212224678999999999752 11 236999954
No 109
>2e6r_A Jumonji/ARID domain-containing protein 1D; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=49.34 E-value=1.3 Score=35.54 Aligned_cols=50 Identities=20% Similarity=0.430 Sum_probs=31.2
Q ss_pred CCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCcc
Q 016624 28 QDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQ 77 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~ 77 (386)
+..++..|.||...-....-+..-.|...||..|+..-+.. .-.||.|..
T Consensus 12 ~~~~~~~C~vC~~~~~~~~ll~CD~C~~~~H~~Cl~Ppl~~~P~g~W~C~~C~~ 65 (92)
T 2e6r_A 12 QFIDSYICQVCSRGDEDDKLLFCDGCDDNYHIFCLLPPLPEIPRGIWRCPKCIL 65 (92)
T ss_dssp CCCCCCCCSSSCCSGGGGGCEECTTTCCEECSSSSSSCCSSCCSSCCCCHHHHH
T ss_pred hccCCCCCccCCCcCCCCCEEEcCCCCchhccccCCCCcccCCCCCcCCccCcC
Confidence 44457789999976321112333568889999998643332 225888843
No 110
>1z2q_A LM5-1; membrane protein, FYVE domain, zinc-finger; NMR {Leishmania major}
Probab=48.79 E-value=9.7 Score=29.59 Aligned_cols=37 Identities=19% Similarity=0.302 Sum_probs=26.8
Q ss_pred CCCCCcccccccccccCCC-CeeecccCCcccHHHHHH
Q 016624 28 QDSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCVLE 64 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~ 64 (386)
.|.+...|.+|...|.... ....-.||+.||..|...
T Consensus 17 pd~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 54 (84)
T 1z2q_A 17 EDEDAPACNGCGCVFTTTVRRHHCRNCGYVLCGDCSRH 54 (84)
T ss_dssp CTTTCCBCTTTCCBCCTTSCCEECTTTCCEECTGGGCC
T ss_pred cCCCCCCCcCcCCccccchhcccccCCCcEEChHHhCC
Confidence 4555678999999985322 234578999999999654
No 111
>1joc_A EEA1, early endosomal autoantigen 1; FYVE domain, inositol 3-phosphate binding, membrane protein; HET: ITP; 2.20A {Homo sapiens} SCOP: g.50.1.1 h.1.21.1 PDB: 1hyi_A* 1hyj_A
Probab=48.33 E-value=8.4 Score=32.34 Aligned_cols=37 Identities=22% Similarity=0.442 Sum_probs=25.9
Q ss_pred CCCCCcccccccccccCCC-CeeecccCCcccHHHHHH
Q 016624 28 QDSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCVLE 64 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~ 64 (386)
.|.+-..|.+|...|.... ....-.||+.||..|...
T Consensus 65 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~vfC~~Cs~~ 102 (125)
T 1joc_A 65 EDNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSAK 102 (125)
T ss_dssp CGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCE
T ss_pred cCCCCCCCcCcCCccccccccccCCCCCeEEChHHhCC
Confidence 3444568999999985322 235578999999999543
No 112
>3t7l_A Zinc finger FYVE domain-containing protein 16; structural genomics consortium, SGC, lipid BIND protein, transport protein; 1.09A {Homo sapiens}
Probab=46.01 E-value=10 Score=29.98 Aligned_cols=38 Identities=21% Similarity=0.346 Sum_probs=26.7
Q ss_pred CCCCCcccccccccccCCC-CeeecccCCcccHHHHHHH
Q 016624 28 QDSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCVLEW 65 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~W 65 (386)
.|.+-..|.+|...|.... ......||+.||..|...+
T Consensus 16 ~d~~~~~C~~C~~~F~~~~RrhhCr~CG~v~C~~Cs~~~ 54 (90)
T 3t7l_A 16 PDSEAPNCMNCQVKFTFTKRRHHCRACGKVFCGVCCNRK 54 (90)
T ss_dssp CGGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSCEE
T ss_pred ccccCCcCcCCCCcccchhhCccccCCCCEECCcccCCe
Confidence 3444567999999884322 2345789999999996543
No 113
>2jmo_A Parkin; IBR, E3 ligase, zinc binding domain, RBR; NMR {Homo sapiens}
Probab=45.33 E-value=3.3 Score=32.08 Aligned_cols=36 Identities=17% Similarity=0.365 Sum_probs=22.7
Q ss_pred Cccccc--ccccccCC---CCeeec-----ccCCcccHHHHHHHHh
Q 016624 32 DDACSI--CLEEFSES---DPSTVT-----SCKHEFHLQCVLEWCQ 67 (386)
Q Consensus 32 d~~C~I--Cle~f~~~---d~~~vl-----pCgH~FC~~CI~~Wlq 67 (386)
-.-||- |-..+... ..+... .|++.||..|...|-.
T Consensus 25 ~~~CP~p~C~~~v~~~~~~~~v~C~~~~~~~C~~~FC~~C~~~wH~ 70 (80)
T 2jmo_A 25 GVLCPRPGCGAGLLPEPDQRKVTCEGGNGLGCGFAFCRECKEAYHE 70 (80)
T ss_dssp SCCCCSSSCCCCCCCCSCTTSBCTTSSSTTCCSCCEETTTTEECCS
T ss_pred cEECCCCCCCcccEECCCCCcCCCCCCCCCCCCCeeccccCccccC
Confidence 445776 76654221 123334 6999999999988743
No 114
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide binding, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=45.28 E-value=10 Score=29.40 Aligned_cols=35 Identities=20% Similarity=0.467 Sum_probs=25.0
Q ss_pred CCCCCcccccccccccCCC-CeeecccCCcccHHHH
Q 016624 28 QDSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCV 62 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI 62 (386)
.|++-..|.+|...|.... ....-.||.+||..|.
T Consensus 10 pd~~~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs 45 (84)
T 1x4u_A 10 PTNNFGNCTGCSATFSVLKKRRSCSNCGNSFCSRCC 45 (84)
T ss_dssp SCCCCSSCSSSCCCCCSSSCCEECSSSCCEECTTTS
T ss_pred cCCCCCcCcCcCCccccchhhhhhcCCCcEEChhhc
Confidence 4555568999999984322 2344689999999884
No 115
>2yw8_A RUN and FYVE domain-containing protein 1; structure genomics, structural genomics, NPPSFA; 3.00A {Homo sapiens} PDB: 2yqm_A
Probab=45.28 E-value=9.9 Score=29.40 Aligned_cols=37 Identities=30% Similarity=0.534 Sum_probs=26.2
Q ss_pred CCCCCcccccccccccCCC-CeeecccCCcccHHHHHH
Q 016624 28 QDSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCVLE 64 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~ 64 (386)
.|.+-..|.+|...|.... ....-.||..||..|...
T Consensus 15 ~d~~~~~C~~C~~~Fs~~~RrHHCR~CG~v~C~~Cs~~ 52 (82)
T 2yw8_A 15 KDDEATHCRQCEKEFSISRRKHHCRNCGHIFCNTCSSN 52 (82)
T ss_dssp CCCCCCBCTTTCCBCBTTBCCEECTTTCCEECSGGGCE
T ss_pred cCccCCcccCcCCcccCccccccCCCCCCEEChHHhCC
Confidence 3445568999999985322 234578999999999653
No 116
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=44.68 E-value=26 Score=28.49 Aligned_cols=32 Identities=22% Similarity=0.453 Sum_probs=22.1
Q ss_pred Ccccccccccc------cCCCCeeecccCCcccHHHHH
Q 016624 32 DDACSICLEEF------SESDPSTVTSCKHEFHLQCVL 63 (386)
Q Consensus 32 d~~C~ICle~f------~~~d~~~vlpCgH~FC~~CI~ 63 (386)
...|.||+..- ..++-+.-..|+..||..||.
T Consensus 5 ~~~C~~C~~~~~~~~~g~~~~Ll~C~~C~~~~H~~Cl~ 42 (112)
T 3v43_A 5 IPICSFCLGTKEQNREKKPEELISCADCGNSGHPSCLK 42 (112)
T ss_dssp CSSBTTTCCCTTCCTTSCCCCCEECTTTCCEECHHHHT
T ss_pred CccccccCCchhhCcCCCchhceEhhhcCCCCCCchhc
Confidence 56799998752 111224447899999999995
No 117
>1zbd_B Rabphilin-3A; G protein, effector, RABCDR, synaptic exocytosis, RAB protein, RAB3A; HET: GTP; 2.60A {Rattus norvegicus} SCOP: g.50.1.1
Probab=43.80 E-value=7.8 Score=33.11 Aligned_cols=34 Identities=18% Similarity=0.475 Sum_probs=24.5
Q ss_pred CCCcccccccccccC-CC-CeeecccCCcccHHHHH
Q 016624 30 SCDDACSICLEEFSE-SD-PSTVTSCKHEFHLQCVL 63 (386)
Q Consensus 30 e~d~~C~ICle~f~~-~d-~~~vlpCgH~FC~~CI~ 63 (386)
..+..|.||...|.. .. ......|.|.+|..|-.
T Consensus 53 ~~~~~C~~C~~~~g~l~~~g~~C~~C~~~VC~~C~~ 88 (134)
T 1zbd_B 53 DGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCGV 88 (134)
T ss_dssp CSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSEE
T ss_pred CCCccccccCCCcccccCCCCCCCCCCcccccccCC
Confidence 457899999999832 12 23557899999988843
No 118
>2zet_C Melanophilin; complex, GTP-binding protein, GTPase, G-protein, RAB, RAB27B, effector, SLP homology domain, acetylation, lipoprotein, membrane; HET: GTP; 3.00A {Mus musculus}
Probab=43.49 E-value=11 Score=32.97 Aligned_cols=47 Identities=15% Similarity=0.342 Sum_probs=31.5
Q ss_pred CCcccccccccccC--CCCeeecccCCcccHHHHHHHHhcC--CCCCCCccc
Q 016624 31 CDDACSICLEEFSE--SDPSTVTSCKHEFHLQCVLEWCQRS--SQCPMCWQP 78 (386)
Q Consensus 31 ~d~~C~ICle~f~~--~d~~~vlpCgH~FC~~CI~~Wlq~~--~sCP~CR~~ 78 (386)
.+..|.+|...|.. ........|.|.+|..|-. |.... -.|-+|++.
T Consensus 67 ~~~~C~~C~~~fg~l~~~g~~C~~C~~~VC~~C~~-~~~~~~~W~C~vC~k~ 117 (153)
T 2zet_C 67 NETHCARCLQPYRLLLNSRRQCLECSLFVCKSCSH-AHPEEQGWLCDPCHLA 117 (153)
T ss_dssp GGTBCTTTCCBGGGCSSCCEECTTTCCEECGGGEE-CCSSSSSCEEHHHHHH
T ss_pred CCccchhhcCccccccCCCCcCCCCCchhhccccc-ccCCCCcEeeHHHHHH
Confidence 58899999998642 2335568899999999962 33222 247777543
No 119
>2l43_A N-teminal domain from histone H3.3, linker, PHD1 from bromodomain-containing protein...; PHD finger, histone CODE, transcription; NMR {Homo sapiens}
Probab=42.52 E-value=3.6 Score=32.57 Aligned_cols=55 Identities=22% Similarity=0.319 Sum_probs=33.6
Q ss_pred CCCCcccccccccccCCC-C-eeecccCCcccHHHHHHHHh--cCCCCCCCcccCCCCC
Q 016624 29 DSCDDACSICLEEFSESD-P-STVTSCKHEFHLQCVLEWCQ--RSSQCPMCWQPISLKD 83 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d-~-~~vlpCgH~FC~~CI~~Wlq--~~~sCP~CR~~i~~~d 83 (386)
.+++..|.||...-.... . +..-.|.-.||..|+..-.. ..-.||.|......+.
T Consensus 22 ~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~fH~~Cl~p~~vP~g~W~C~~C~~~~~~~~ 80 (88)
T 2l43_A 22 IDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQSRARPA 80 (88)
T ss_dssp CCCCCCCSSCCSSSSCSEEEEEECSSSCCCCCHHHHTCSSCCSSCCCCHHHHHHTTSCC
T ss_pred CCCCCcCCcCCCCCCCCCCCEEECCCCCchhhcccCCCCccCCCceECccccCccchhh
Confidence 345789999997531111 1 22246778999999875321 2336999976655443
No 120
>2kgg_A Histone demethylase jarid1A; PHD finger, histone modification, leukemia, alternative splicing, chromatin regulator, developmental protein; NMR {Homo sapiens} PDB: 2kgi_A* 3gl6_A*
Probab=42.33 E-value=7.7 Score=27.43 Aligned_cols=43 Identities=21% Similarity=0.287 Sum_probs=27.5
Q ss_pred ccccccccccCCCCeee-c-ccCCcccHHHHHHHH----hcCCCCCCCc
Q 016624 34 ACSICLEEFSESDPSTV-T-SCKHEFHLQCVLEWC----QRSSQCPMCW 76 (386)
Q Consensus 34 ~C~ICle~f~~~d~~~v-l-pCgH~FC~~CI~~Wl----q~~~sCP~CR 76 (386)
.|.||...+.++...+. - .|...||..|+.--. .....||.|+
T Consensus 4 ~cc~C~~p~~~~~~mI~Cd~~C~~WfH~~Cvgl~~~~~~~~~~~C~~C~ 52 (52)
T 2kgg_A 4 AAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMAENEDYICINCA 52 (52)
T ss_dssp SCTTCCCCCCTTCCEEECTTTTCCEEETTTTTCCHHHHHHSCCCCSCC-
T ss_pred cCCCCcCccCCCCcEEEeCCCCCccCcccccCCCccccCCCCEECCCCC
Confidence 57899888743333322 3 577899999965321 2467899885
No 121
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural genomics consortium, DH domain, SGC, L binding protein; 2.80A {Homo sapiens}
Probab=41.75 E-value=5.5 Score=39.21 Aligned_cols=51 Identities=16% Similarity=0.262 Sum_probs=0.0
Q ss_pred CCCCcccccccccccCCC-CeeecccCCcccHHHHHHHHhc-------CCCCCCCcccC
Q 016624 29 DSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCVLEWCQR-------SSQCPMCWQPI 79 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~Wlq~-------~~sCP~CR~~i 79 (386)
+.....|.+|...|.... ......||+.||..|...++.- ...|-.|-..+
T Consensus 372 ~~~~~~c~~c~~~f~~~~r~h~Cr~Cg~~~C~~Cs~~~~~~~~~~~~~~rvC~~C~~~l 430 (434)
T 3mpx_A 372 VTHVMMCMNCGCDFSLTLRRHHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGCFGEL 430 (434)
T ss_dssp -----------------------------------------------------------
T ss_pred cccCCcCCCcCCCCCCcchhhhcccCcCEeehhhCCCeeeCCCCCCCcCEecHHHHHHH
Confidence 334568999999884321 1345689999999998765421 23577775544
No 122
>3o70_A PHD finger protein 13; PHF13, structural genomics consortium, SGC, structural genom type zinc finger, protein binding, zinc ION binding; 1.85A {Homo sapiens}
Probab=40.65 E-value=3.2 Score=31.37 Aligned_cols=48 Identities=21% Similarity=0.455 Sum_probs=29.6
Q ss_pred CCCCCcccccccccccCCCCe-eecccCCcccHHHHHHHHh---cCCCCCCCcc
Q 016624 28 QDSCDDACSICLEEFSESDPS-TVTSCKHEFHLQCVLEWCQ---RSSQCPMCWQ 77 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~-~vlpCgH~FC~~CI~~Wlq---~~~sCP~CR~ 77 (386)
++.+...| ||..... +... ..-.|...||..|+.--.. ....||.|+.
T Consensus 15 ~~~~~~~C-iC~~~~~-~~~MIqCd~C~~WfH~~Cvgi~~~~~~~~~~C~~C~~ 66 (68)
T 3o70_A 15 YFQGLVTC-FCMKPFA-GRPMIECNECHTWIHLSCAKIRKSNVPEVFVCQKCRD 66 (68)
T ss_dssp TTTTCCCS-TTCCCCT-TCCEEECTTTCCEEETTTTTCCTTSCCSSCCCHHHHT
T ss_pred CCCCceEe-ECCCcCC-CCCEEECCCCCccccccccCcCcccCCCcEECCCCCC
Confidence 34446678 9988752 2222 2356888999999754221 2456888854
No 123
>4gne_A Histone-lysine N-methyltransferase NSD3; zinc finger, transcription, nuclear protein, transf nuclear protein complex; 1.47A {Homo sapiens} PDB: 4gnd_A 4gnf_A 4gng_A*
Probab=39.18 E-value=10 Score=31.28 Aligned_cols=52 Identities=17% Similarity=0.385 Sum_probs=31.4
Q ss_pred cCCCCCCCcccccccccccCCCCeee-c--ccCCcccHHHHHHHHhcC----CCCCCCcccCCCC
Q 016624 25 GGIQDSCDDACSICLEEFSESDPSTV-T--SCKHEFHLQCVLEWCQRS----SQCPMCWQPISLK 82 (386)
Q Consensus 25 ~~iqde~d~~C~ICle~f~~~d~~~v-l--pCgH~FC~~CI~~Wlq~~----~sCP~CR~~i~~~ 82 (386)
...++..+..|.+|.+. ++ +.. - .|...||..|+. +... -.||.|...+..+
T Consensus 8 ~~~~~~~~~~C~~C~~~---G~-ll~CD~~~Cp~~fH~~Cl~--L~~~P~g~W~Cp~c~C~~C~k 66 (107)
T 4gne_A 8 TEPKQMHEDYCFQCGDG---GE-LVMCDKKDCPKAYHLLCLN--LTQPPYGKWECPWHQCDECSS 66 (107)
T ss_dssp --CCCSSCSSCTTTCCC---SE-EEECCSTTCCCEECTGGGT--CSSCCSSCCCCGGGBCTTTCS
T ss_pred CCCcCCCCCCCCcCCCC---Cc-EeEECCCCCCcccccccCc--CCcCCCCCEECCCCCCCcCCC
Confidence 34445568899999853 22 222 2 477899999986 4332 2588776555443
No 124
>1y02_A CARP2, FYVE-ring finger protein sakura; zinc-binding module, phosphoinositide binding, caspase regulation, metal binding protein; 1.80A {Homo sapiens} SCOP: a.140.2.1 g.50.1.1
Probab=39.18 E-value=2.1 Score=36.16 Aligned_cols=51 Identities=20% Similarity=0.508 Sum_probs=31.0
Q ss_pred CCCCCcccccccccccCCC-CeeecccCCcccHHHHHHHHhcCCCCCCCccc
Q 016624 28 QDSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQP 78 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~ 78 (386)
-|.....|.+|...|.... ....-.||..||..|..........|-.|...
T Consensus 15 Pd~~~~~C~~C~~~Fs~~~RkHHCR~CG~ifC~~Cs~~~~~~vRVC~~C~~~ 66 (120)
T 1y02_A 15 PTGLEPSCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLCQRF 66 (120)
T ss_dssp -----CCCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHHHHH
T ss_pred CccccCcccCcCCccccccccccCCCCCCeeCHHHhCCCCCCceECHHHHHH
Confidence 3445678999999884321 23457899999999976655545668888543
No 125
>3a1b_A DNA (cytosine-5)-methyltransferase 3A, histone H3; zinc-finger, histone binding, chromosomal protein, DNA damag repair, DNA-binding, methylation; HET: DNA; 2.29A {Homo sapiens} PDB: 3a1a_A*
Probab=38.81 E-value=15 Score=32.40 Aligned_cols=47 Identities=23% Similarity=0.474 Sum_probs=31.7
Q ss_pred CCCCCcccccccccccCCCCeee--cccCCcccHHHHHHHHhcC----------CCCCCCcc
Q 016624 28 QDSCDDACSICLEEFSESDPSTV--TSCKHEFHLQCVLEWCQRS----------SQCPMCWQ 77 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~v--lpCgH~FC~~CI~~Wlq~~----------~sCP~CR~ 77 (386)
+|-.+..|.||-+-- +-+.. ..|...||..||..++-.. =.|-+|.-
T Consensus 75 eDG~~~yC~wC~~Gg---~l~~Cdn~~C~r~FC~~CI~~nvG~~~~~~i~~~d~W~Cy~C~P 133 (159)
T 3a1b_A 75 DDGYQSYCTICCGGR---EVLMCGNNNCCRCFCVECVDLLVGPGAAQAAIKEDPWNCYMCGH 133 (159)
T ss_dssp TTSSBSSCTTTSCCS---EEEECSSTTTCCEEEHHHHHHHTCTTHHHHHHTSSSCCCTTTCS
T ss_pred CCCCcceeeEecCCC---eEEeeCCCCCCCchhHHHHHHhcCHhHHHHHhccCCCEEEecCC
Confidence 344577899999752 11222 2588899999999987431 25988853
No 126
>1wd2_A Ariadne-1 protein homolog; ring, IBR, triad, zinc finger, ligase; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=37.93 E-value=3.8 Score=30.25 Aligned_cols=38 Identities=21% Similarity=0.532 Sum_probs=25.5
Q ss_pred CcccccccccccCCC---Ceeecc--cCCcccHHHHHHHHhcC
Q 016624 32 DDACSICLEEFSESD---PSTVTS--CKHEFHLQCVLEWCQRS 69 (386)
Q Consensus 32 d~~C~ICle~f~~~d---~~~vlp--CgH~FC~~CI~~Wlq~~ 69 (386)
-..||-|.-.+...+ .++... |++.||+.|+..|....
T Consensus 6 ~k~CP~C~~~Iek~~GCnhmtC~~~~C~~~FCw~C~~~~~~~~ 48 (60)
T 1wd2_A 6 TKECPKCHVTIEKDGGCNHMVCRNQNCKAEFCWVCLGPWEPHG 48 (60)
T ss_dssp CCCCTTTCCCCSSCCSCCSSSCCSSGGGSCCSSSSCSCSGGGG
T ss_pred ceECcCCCCeeEeCCCCCcEEECCCCcCCEEeeCcCCCcccCC
Confidence 346888887764322 233344 89999999998887543
No 127
>1dvp_A HRS, hepatocyte growth factor-regulated tyrosine kinase substrate; VHS, FYVE, zinc finger, superhelix, transferase; HET: CIT; 2.00A {Drosophila melanogaster} SCOP: a.118.9.2 g.50.1.1
Probab=37.78 E-value=12 Score=34.02 Aligned_cols=33 Identities=24% Similarity=0.535 Sum_probs=24.4
Q ss_pred CcccccccccccCCC-CeeecccCCcccHHHHHH
Q 016624 32 DDACSICLEEFSESD-PSTVTSCKHEFHLQCVLE 64 (386)
Q Consensus 32 d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~ 64 (386)
+..|.+|...|.... ....-.||+.||..|...
T Consensus 161 ~~~C~~C~~~F~~~~rrhhCr~CG~v~C~~Cs~~ 194 (220)
T 1dvp_A 161 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 194 (220)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCccCCCCCccCCcccccccCCcCCEEChHHhCC
Confidence 568999999984322 245578999999998543
No 128
>2yt5_A Metal-response element-binding transcription factor 2; zinc-regulated factor 1, ZIRF1, metal-response element DNA-binding protein M96; NMR {Mus musculus}
Probab=36.75 E-value=9.7 Score=27.89 Aligned_cols=51 Identities=24% Similarity=0.554 Sum_probs=32.2
Q ss_pred CCCCcccccccccccCC-CC-eeecccCCcccHHHHHHHHh-------cCCCCCCCcccC
Q 016624 29 DSCDDACSICLEEFSES-DP-STVTSCKHEFHLQCVLEWCQ-------RSSQCPMCWQPI 79 (386)
Q Consensus 29 de~d~~C~ICle~f~~~-d~-~~vlpCgH~FC~~CI~~Wlq-------~~~sCP~CR~~i 79 (386)
+..+..|.||....... .. +..-.|...||..|+..-+. ..-.|+.|....
T Consensus 3 ~~~~~~C~vC~~~~~~~~~~ll~Cd~C~~~~H~~C~~p~l~~~~~~p~~~W~C~~C~~~~ 62 (66)
T 2yt5_A 3 SGSSGVCTICQEEYSEAPNEMVICDKCGQGYHQLCHTPHIDSSVIDSDEKWLCRQCVFAT 62 (66)
T ss_dssp CCCCCCBSSSCCCCCBTTBCEEECSSSCCEEETTTSSSCCCHHHHHSSCCCCCHHHHHTT
T ss_pred CCCCCCCCCCCCCCCCCCCCEEECCCCChHHHhhhCCCcccccccCCCCCEECCCCcCcc
Confidence 44578999999764221 11 23357888999999875331 234688886543
No 129
>3zyq_A Hepatocyte growth factor-regulated tyrosine kinas substrate; signaling; 1.48A {Homo sapiens} PDB: 4avx_A*
Probab=35.81 E-value=13 Score=34.06 Aligned_cols=33 Identities=18% Similarity=0.462 Sum_probs=24.7
Q ss_pred CcccccccccccCCC-CeeecccCCcccHHHHHH
Q 016624 32 DDACSICLEEFSESD-PSTVTSCKHEFHLQCVLE 64 (386)
Q Consensus 32 d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~ 64 (386)
+..|.+|...|.... ......||+.||..|...
T Consensus 164 ~~~C~~C~~~F~~~~RrhHCR~CG~v~C~~Cs~~ 197 (226)
T 3zyq_A 164 AEECHRCRVQFGVMTRKHHCRACGQIFCGKCSSK 197 (226)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECTTTCCE
T ss_pred CCCCcCcCCCCCccccccccCCCcCEeChhhcCC
Confidence 568999999885322 245578999999999654
No 130
>2ku3_A Bromodomain-containing protein 1; PHD finger, chromatin regulator, metal-binding, finger, signaling protein; NMR {Homo sapiens}
Probab=33.68 E-value=29 Score=26.21 Aligned_cols=51 Identities=25% Similarity=0.362 Sum_probs=31.0
Q ss_pred CCCCCCccccccccccc-CCCC-eeecccCCcccHHHHHHHHh--cCCCCCCCcc
Q 016624 27 IQDSCDDACSICLEEFS-ESDP-STVTSCKHEFHLQCVLEWCQ--RSSQCPMCWQ 77 (386)
Q Consensus 27 iqde~d~~C~ICle~f~-~~d~-~~vlpCgH~FC~~CI~~Wlq--~~~sCP~CR~ 77 (386)
.....+..|.||...-. +.+. +..-.|.-.||..|+..-.. ..-.||.|+.
T Consensus 11 ~~~~~~~~C~vC~~~~s~~~~~ll~CD~C~~~~H~~Cl~~~~vP~g~W~C~~C~~ 65 (71)
T 2ku3_A 11 SLIDEDAVCSICMDGESQNSNVILFCDMCNLAVHQECYGVPYIPEGQWLCRHCLQ 65 (71)
T ss_dssp CCCCSSCSCSSSCCCCCCSSSCEEECSSSCCEEEHHHHTCSSCCSSCCCCHHHHH
T ss_pred cCCCCCCCCCCCCCCCCCCCCCEEECCCCCCccccccCCCCcCCCCCcCCccCcC
Confidence 34556889999987631 1122 22356888999999864321 1235777743
No 131
>2ct7_A Ring finger protein 31; IBR, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.44.1.4
Probab=33.45 E-value=4.9 Score=31.40 Aligned_cols=33 Identities=24% Similarity=0.626 Sum_probs=20.7
Q ss_pred cccccccccCC---CCeeecccCCcccHHHHHHHHh
Q 016624 35 CSICLEEFSES---DPSTVTSCKHEFHLQCVLEWCQ 67 (386)
Q Consensus 35 C~ICle~f~~~---d~~~vlpCgH~FC~~CI~~Wlq 67 (386)
||-|-..+... ..+....|++.||..|-..|-+
T Consensus 28 CP~C~~~~~~~~~~~~v~C~~C~~~FC~~C~~~w~~ 63 (86)
T 2ct7_A 28 CAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEE 63 (86)
T ss_dssp CSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCT
T ss_pred CcCCCchheecCCCCceEeCCCCCccccccCCchhh
Confidence 88776654211 1234456999999888877733
No 132
>1wfk_A Zinc finger, FYVE domain containing 19; riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Mus musculus} SCOP: g.50.1.1
Probab=33.06 E-value=19 Score=28.27 Aligned_cols=33 Identities=18% Similarity=0.386 Sum_probs=24.0
Q ss_pred CcccccccccccCCCC-eeecccCCcccHHHHHH
Q 016624 32 DDACSICLEEFSESDP-STVTSCKHEFHLQCVLE 64 (386)
Q Consensus 32 d~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~ 64 (386)
...|.+|...|..... ...-.||.+||..|...
T Consensus 9 ~~~C~~C~~~F~~~~RrHHCR~CG~vfC~~Cs~~ 42 (88)
T 1wfk_A 9 ESRCYGCAVKFTLFKKEYGCKNCGRAFCNGCLSF 42 (88)
T ss_dssp CSBCTTTCCBCCSSSCEEECSSSCCEEETTTSCE
T ss_pred CCCCcCcCCcccCccccccCCCCCCEEChhHcCC
Confidence 5589999999843221 34468999999999644
No 133
>2xb1_A Pygopus homolog 2, B-cell CLL/lymphoma 9-like Pro; fusion protein, signal transduction, transcription, metal BI WNT proteins; 1.90A {Homo sapiens}
Probab=32.62 E-value=17 Score=29.53 Aligned_cols=47 Identities=21% Similarity=0.491 Sum_probs=31.1
Q ss_pred CcccccccccccCCCCeee-c-ccCCcccHHHHHHHH----------hcCCCCCCCccc
Q 016624 32 DDACSICLEEFSESDPSTV-T-SCKHEFHLQCVLEWC----------QRSSQCPMCWQP 78 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~v-l-pCgH~FC~~CI~~Wl----------q~~~sCP~CR~~ 78 (386)
...|+||...+.+....+. - .|...||..|+.--. .....||.|+..
T Consensus 3 ~~~C~iC~~p~~~~~~mi~Cdd~C~~WfH~~CVglt~~~~~~i~~~~~~~~~Cp~C~~~ 61 (105)
T 2xb1_A 3 VYPCGACRSEVNDDQDAILCEASCQKWFHRECTGMTESAYGLLTTEASAVWACDLCLKT 61 (105)
T ss_dssp CCBCTTTCSBCCTTSCEEECTTTTCCEEEGGGTTCCHHHHHHHHHCTTEEECCHHHHHT
T ss_pred cCCCCCCCCccCCCCCEEEecCCcccccccccCCcCHHHHHhhccCCCCCEECccccCc
Confidence 3579999999754333333 2 678899999964211 034579999764
No 134
>3v43_A Histone acetyltransferase KAT6A; MOZ, PHD finger, transferase-structural protein; 1.47A {Homo sapiens} PDB: 2ln0_A
Probab=32.45 E-value=10 Score=30.90 Aligned_cols=44 Identities=25% Similarity=0.548 Sum_probs=27.4
Q ss_pred ccccccccccCC-CCeeecccCCcccHHHHHHHHhcC----CCCCCCcc
Q 016624 34 ACSICLEEFSES-DPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCWQ 77 (386)
Q Consensus 34 ~C~ICle~f~~~-d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR~ 77 (386)
.|.||.+.-.+. .-+.--.|...||..|+..-+... -.||.|+.
T Consensus 63 ~C~vC~~~~~~~~~ll~Cd~C~~~yH~~Cl~p~l~~~P~~~W~C~~C~~ 111 (112)
T 3v43_A 63 TCSSCRDQGKNADNMLFCDSCDRGFHMECCDPPLTRMPKGMWICQICRP 111 (112)
T ss_dssp CBTTTCCCCCTTCCCEECTTTCCEECGGGCSSCCSSCCSSCCCCTTTSC
T ss_pred ccccccCcCCCccceEEcCCCCCeeecccCCCCCCCCCCCCeECCCCCC
Confidence 577887642111 222335688999999987655432 36999974
No 135
>1vfy_A Phosphatidylinositol-3-phosphate binding FYVE domain of protein VPS27; endosome maturation, intracellular trafficking; 1.15A {Saccharomyces cerevisiae} SCOP: g.50.1.1
Probab=32.17 E-value=21 Score=26.85 Aligned_cols=32 Identities=31% Similarity=0.515 Sum_probs=23.3
Q ss_pred CcccccccccccCCC-CeeecccCCcccHHHHH
Q 016624 32 DDACSICLEEFSESD-PSTVTSCKHEFHLQCVL 63 (386)
Q Consensus 32 d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~ 63 (386)
+..|.+|...|.... ....-.||..||..|..
T Consensus 11 ~~~C~~C~~~F~~~~RrHHCR~CG~v~C~~Cs~ 43 (73)
T 1vfy_A 11 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSS 43 (73)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSC
T ss_pred CCcccCCCCccCCccccccCCCCCEEEcccccC
Confidence 358999999984321 23446899999999954
No 136
>2o35_A Hypothetical protein DUF1244; helix bundle, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.12A {Sinorhizobium meliloti} SCOP: a.293.1.1
Probab=29.57 E-value=20 Score=29.43 Aligned_cols=13 Identities=23% Similarity=0.797 Sum_probs=11.2
Q ss_pred cccHHHHHHHHhc
Q 016624 56 EFHLQCVLEWCQR 68 (386)
Q Consensus 56 ~FC~~CI~~Wlq~ 68 (386)
-||.-||..|+..
T Consensus 42 GFCRNCLskWy~~ 54 (105)
T 2o35_A 42 GFCRNCLSNWYRE 54 (105)
T ss_dssp SCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 4999999999853
No 137
>3fyb_A Protein of unknown function (DUF1244); hydrocar degrading, structural genomics, PSI-2; HET: PEG; 1.80A {Alcanivorax borkumensis SK2}
Probab=29.20 E-value=21 Score=29.32 Aligned_cols=12 Identities=25% Similarity=0.886 Sum_probs=10.9
Q ss_pred cccHHHHHHHHh
Q 016624 56 EFHLQCVLEWCQ 67 (386)
Q Consensus 56 ~FC~~CI~~Wlq 67 (386)
-||.-||..|+.
T Consensus 41 GFCRNCLskWy~ 52 (104)
T 3fyb_A 41 DFCRNCLAKWLM 52 (104)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999986
No 138
>2vnf_A ING 4, P29ING4, inhibitor of growth protein 4; acetylation, alternative splicing, anti-oncogene, cell cycle, coiled C nucleus, zinc, zinc-finger, ING4; HET: M3L; 1.76A {Homo sapiens} SCOP: g.50.1.2 PDB: 2k1j_A 2jmq_A 2qic_A*
Probab=28.87 E-value=5.7 Score=29.13 Aligned_cols=46 Identities=24% Similarity=0.481 Sum_probs=25.3
Q ss_pred CCCCCCcccccccccccCCCCeee-cc--cC-CcccHHHHHHHHhc----CCCCCCCcc
Q 016624 27 IQDSCDDACSICLEEFSESDPSTV-TS--CK-HEFHLQCVLEWCQR----SSQCPMCWQ 77 (386)
Q Consensus 27 iqde~d~~C~ICle~f~~~d~~~v-lp--Cg-H~FC~~CI~~Wlq~----~~sCP~CR~ 77 (386)
++.++...| ||.... ...++. -. |. ..||..|+. +.. .-.||.|+.
T Consensus 5 ~d~~e~~~C-~C~~~~--~g~mi~CD~cdC~~~wfH~~Cvg--l~~~p~g~w~C~~C~~ 58 (60)
T 2vnf_A 5 VDPNEPTYC-LCHQVS--YGEMIGCDNPDCSIEWFHFACVG--LTTKPRGKWFCPRCSQ 58 (60)
T ss_dssp ----CCEET-TTTEEC--CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred cCCCCCCEE-ECCCcC--CCCEEEeCCCCCCCceEehhcCC--CCcCCCCCEECcCccC
Confidence 344556677 998864 121111 23 54 589999987 322 346888854
No 139
>1m3v_A FLIN4, fusion of the LIM interacting domain of LDB1 and the N-terminal LIM domain of LMO4...; fusion protein, LMO proteins, metal binding protein; NMR {Mus musculus} SCOP: g.39.1.3 g.39.1.3
Probab=28.70 E-value=32 Score=27.91 Aligned_cols=51 Identities=16% Similarity=0.040 Sum_probs=34.4
Q ss_pred cccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCC
Q 016624 33 DACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKD 83 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d 83 (386)
+.|..|-..|.+........=+..||..|....+.....|-.|...|....
T Consensus 33 F~C~~C~~~L~~~~~~~~~~~g~~yC~~cy~~~f~~~~~C~~C~~~I~~~~ 83 (122)
T 1m3v_A 33 LKCSSCQAQLGDIGTSSYTKSGMILCRNDYIRLFGNSGAGGSGGHMGSGGD 83 (122)
T ss_dssp HCCSSSCCCTTTSEECCEEETTEEECHHHHHHHHCCCCSSSCSSCCSCCEE
T ss_pred CCcCCCCCcccccCCeEEEECCeeecHHHHHHHcCCCCccccCCCCcCchh
Confidence 478888888732111233455678999998876655558999998887543
No 140
>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82
Probab=27.68 E-value=15 Score=30.40 Aligned_cols=31 Identities=23% Similarity=0.443 Sum_probs=20.4
Q ss_pred CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 46 DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 46 d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
.+.....||+.|+ .-+.....||.|+.....
T Consensus 66 ~p~~C~~CG~~F~-----~~~~kPsrCP~CkSe~Ie 96 (105)
T 2gmg_A 66 KPAQCRKCGFVFK-----AEINIPSRCPKCKSEWIE 96 (105)
T ss_dssp CCCBBTTTCCBCC-----CCSSCCSSCSSSCCCCBC
T ss_pred ECcChhhCcCeec-----ccCCCCCCCcCCCCCccC
Confidence 3457789999992 112234679999887554
No 141
>3c6w_A P28ING5, inhibitor of growth protein 5; chromatin, PHD, ING, epigenetics, alternative splicing, metal-binding, phosphoprotein, zinc; HET: M3L; 1.75A {Homo sapiens} PDB: 2pnx_A*
Probab=27.17 E-value=6.7 Score=28.72 Aligned_cols=45 Identities=24% Similarity=0.467 Sum_probs=25.8
Q ss_pred CCCCCcccccccccccCCCCeee-cc--cC-CcccHHHHHHHHhc----CCCCCCCcc
Q 016624 28 QDSCDDACSICLEEFSESDPSTV-TS--CK-HEFHLQCVLEWCQR----SSQCPMCWQ 77 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~v-lp--Cg-H~FC~~CI~~Wlq~----~~sCP~CR~ 77 (386)
+..++..| ||.... ...++. -. |. ..||..|+. +.. .-.||.|+.
T Consensus 5 d~~e~~yC-~C~~~~--~g~mi~CD~~~C~~~wfH~~Cvg--l~~~p~~~w~Cp~C~~ 57 (59)
T 3c6w_A 5 GSNEPTYC-LCHQVS--YGEMIGCDNPDCPIEWFHFACVD--LTTKPKGKWFCPRCVQ 57 (59)
T ss_dssp ---CCEET-TTTEEC--CSEEEECSCTTCSSCEEETGGGT--CSSCCSSCCCCHHHHC
T ss_pred CCCCCcEE-ECCCCC--CCCeeEeeCCCCCCCCEecccCC--cccCCCCCEECcCccC
Confidence 44456677 998864 122221 23 65 599999987 322 346888854
No 142
>2xjy_A Rhombotin-2; oncoprotein, T-cell leukemia, proto-oncogene, transcription, developmental protein; 2.40A {Homo sapiens} PDB: 2xjz_A
Probab=26.61 E-value=46 Score=26.90 Aligned_cols=50 Identities=14% Similarity=0.205 Sum_probs=33.4
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISL 81 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~ 81 (386)
=+.|..|-..|..........=+..||..|..+-+.....|..|...|..
T Consensus 29 CF~C~~C~~~L~~~~~~~~~~~g~~yC~~~y~~~~~~~~~C~~C~~~I~~ 78 (131)
T 2xjy_A 29 CLSCDLCGCRLGEVGRRLYYKLGRKLCRRDYLRLFGQDGLCASCDKRIRA 78 (131)
T ss_dssp TCBCTTTCCBCSSTTCCEEEETTEEECHHHHHHHHCCCEECTTTCCEECT
T ss_pred HcccCcCCCccccCCCeEEEECCEEeecCchhhhCCCccChhhcCCccCc
Confidence 35788888887321223334556789999987755443479999888864
No 143
>3ask_A E3 ubiquitin-protein ligase UHRF1; histone reader modules, epigenetic regulation, trimethylaion of lysine residue, ligase-DNA binding protein; HET: M3L; 2.90A {Homo sapiens}
Probab=26.28 E-value=12 Score=34.93 Aligned_cols=45 Identities=22% Similarity=0.487 Sum_probs=25.1
Q ss_pred cccccccccccCCCCeeecccCCcccHHHHHHHHhc-----CCCCCCCcc
Q 016624 33 DACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-----SSQCPMCWQ 77 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-----~~sCP~CR~ 77 (386)
..|.||...-..+.-+..-.|...||..|+..-+.. .-.||.|..
T Consensus 175 c~C~vC~~~~~~~~lL~CD~C~~~yH~~CL~PPL~~vP~G~~W~Cp~C~~ 224 (226)
T 3ask_A 175 CACHLCGGRQDPDKQLMCDECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 224 (226)
T ss_dssp TSCSSSCCCCC--CCEECSSSCCEECSCC--CCCCSCCSSSCCCCGGGC-
T ss_pred CCCcCCCCCCCCCCeEEcCCCCcceeCccCCCCcccCCCCCCCCCcCCcC
Confidence 357888753211222333468889999999854432 235999964
No 144
>3lt7_A Adhesin YADA; adhesion, coiled coil, trimeric autotransporter, cell adhesi membrane, cell outer membrane, membrane, plasmid, virulence; 1.50A {Yersinia enterocolitica} PDB: 3lt6_A* 3h7z_A 3h7x_A
Probab=24.04 E-value=5.6 Score=30.10 Aligned_cols=17 Identities=12% Similarity=-0.037 Sum_probs=7.2
Q ss_pred CccccccccchhHHHHH
Q 016624 312 GSENRSENVGITSVSRL 328 (386)
Q Consensus 312 ~~~~~re~agia~v~rm 328 (386)
.+.-.|.|||||+|.-|
T Consensus 44 ~k~~kr~~aGiA~a~A~ 60 (64)
T 3lt7_A 44 DKLEKRLLKLLASSAAL 60 (64)
T ss_dssp HHHHHHHHHHC------
T ss_pred HHHHHHHhhhHHHHHHH
Confidence 33445559999999765
No 145
>2e6s_A E3 ubiquitin-protein ligase UHRF2; PHD domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.38 E-value=14 Score=28.45 Aligned_cols=46 Identities=17% Similarity=0.454 Sum_probs=27.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhc-----CCCCCCCcc
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-----SSQCPMCWQ 77 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-----~~sCP~CR~ 77 (386)
+..|.||...-...+-+.--.|...||..|+..-+.. .-.||.|..
T Consensus 26 ~c~C~vC~~~~~~~~ll~CD~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 76 (77)
T 2e6s_A 26 SCSCRVCGGKHEPNMQLLCDECNVAYHIYCLNPPLDKVPEEEYWYCPSCKT 76 (77)
T ss_dssp SSSCSSSCCCCCSTTEEECSSSCCEEETTSSSSCCSSCCCSSCCCCTTTCC
T ss_pred CCCCcCcCCcCCCCCEEEcCCCCccccccccCCCccCCCCCCCcCCcCccC
Confidence 3378889864211222233468889999998754432 235888854
No 146
>2kwj_A Zinc finger protein DPF3; acetyl-lysine, transcription regulation, nucleus, metal BIND protein; HET: ALY; NMR {Homo sapiens} PDB: 2kwk_A 2kwn_A* 2kwo_A*
Probab=22.77 E-value=37 Score=27.62 Aligned_cols=33 Identities=18% Similarity=0.380 Sum_probs=22.2
Q ss_pred cccccccccccC-------CCCeeecccCCcccHHHHHHH
Q 016624 33 DACSICLEEFSE-------SDPSTVTSCKHEFHLQCVLEW 65 (386)
Q Consensus 33 ~~C~ICle~f~~-------~d~~~vlpCgH~FC~~CI~~W 65 (386)
..|.||+..-.. ++-+.-..|...||..||..+
T Consensus 2 ~~C~~C~~~~~~n~k~g~~~~Li~C~~C~~~~H~~Cl~~~ 41 (114)
T 2kwj_A 2 SYCDFCLGGSNMNKKSGRPEELVSCADCGRSGHPTCLQFT 41 (114)
T ss_dssp CCCSSSCCBTTBCTTTCCCCCCEECSSSCCEECTTTTTCC
T ss_pred CcCccCCCCccccccCCCCCCCeEeCCCCCccchhhCCCh
Confidence 469999875311 122444678999999998654
No 147
>3asl_A E3 ubiquitin-protein ligase UHRF1; histone reader module, epigenetic regulation, LI binding protein complex; 1.41A {Homo sapiens} PDB: 3sou_A 3sow_A* 3sox_A 3zvy_A 2lgg_A 2lgk_A* 2lgl_A 3t6r_A 3zvz_B
Probab=22.30 E-value=11 Score=28.52 Aligned_cols=27 Identities=26% Similarity=0.620 Sum_probs=19.0
Q ss_pred cccCCcccHHHHHHHHhc-----CCCCCCCcc
Q 016624 51 TSCKHEFHLQCVLEWCQR-----SSQCPMCWQ 77 (386)
Q Consensus 51 lpCgH~FC~~CI~~Wlq~-----~~sCP~CR~ 77 (386)
-.|...||..|+..-+.. .-.||.|..
T Consensus 37 D~C~~~yH~~Cl~Ppl~~~P~g~~W~C~~C~~ 68 (70)
T 3asl_A 37 DECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 68 (70)
T ss_dssp TTTCCEEEGGGSSSCCSSCCSSSCCCCTTTSC
T ss_pred CCCCCceecccCCCCcCCCCCCCCcCCcCccC
Confidence 457789999999854432 236999864
No 148
>2a20_A Regulating synaptic membrane exocytosis protein 2; zinc-finger domain, metal binding protein; NMR {Rattus norvegicus} PDB: 2cjs_C
Probab=22.10 E-value=49 Score=24.68 Aligned_cols=37 Identities=19% Similarity=0.463 Sum_probs=23.1
Q ss_pred CCCccccccccc-ccCCCCeeecccCCcccHHHHHHHH
Q 016624 30 SCDDACSICLEE-FSESDPSTVTSCKHEFHLQCVLEWC 66 (386)
Q Consensus 30 e~d~~C~ICle~-f~~~d~~~vlpCgH~FC~~CI~~Wl 66 (386)
.+...|.||+.. |.++---...-|.-.||..|-..|-
T Consensus 7 ~d~~~C~iC~KTKFADG~Gh~C~yCk~r~CaRCGg~v~ 44 (62)
T 2a20_A 7 GDAPTCGICHKTKFADGCGHNCSYCQTKFCARCGGRVS 44 (62)
T ss_dssp SCCCCCSSSSCSCCCSSCCEEBTTTCCEECTTSEEEEE
T ss_pred CCcchhhhhccceeccCCCccccccCCeeecccCCEee
Confidence 347899999986 4343333445566667776655443
No 149
>2xqn_T Testin, TESS; metal-binding protein, cytoskeleton, focal adhesion, acrosom; 2.62A {Homo sapiens}
Probab=21.68 E-value=99 Score=24.69 Aligned_cols=47 Identities=15% Similarity=0.245 Sum_probs=33.2
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
=+.|..|...|. .......=+..||..|.... ....|..|...|...
T Consensus 30 CF~C~~C~~~L~--~~~f~~~~g~~yC~~cy~~~--~~~~C~~C~~~I~~~ 76 (126)
T 2xqn_T 30 HFCCFDCDSILA--GEIYVMVNDKPVCKPCYVKN--HAVVCQGCHNAIDPE 76 (126)
T ss_dssp GSBCTTTCCBCT--TSEEEEETTEEEEHHHHHHH--SCCBCTTTCSBCCTT
T ss_pred CCCcCCCCCCCC--cCEEEeECCEEechHHhCcC--cCccCcccCCcCCcC
Confidence 367888888873 22344456788999997553 356799999988753
No 150
>2k4b_A Transcriptional regulator; DNA binding protein, winged helix; NMR {Lactococcus lactis subsp}
Probab=21.60 E-value=12 Score=29.94 Aligned_cols=31 Identities=19% Similarity=0.199 Sum_probs=25.1
Q ss_pred CCCCCCCcccccc-ccchhHHHHHHHHhcCCC
Q 016624 306 ASMPGTGSENRSE-NVGITSVSRLMEQLGTGE 336 (386)
Q Consensus 306 ~~~~~~~~~~~re-~agia~v~rm~e~l~~~~ 336 (386)
-+++||...+..+ +..-++|+|++.||+-.+
T Consensus 50 ~t~~eL~~~l~~~~~~s~sTVt~~L~rLe~KG 81 (99)
T 2k4b_A 50 ARVDEIYAQIPQELEWSLATVKTLLGRLVKKE 81 (99)
T ss_dssp EEHHHHHHTCCGGGCCCHHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHhcccCCCHhhHHHHHHHHHHCC
Confidence 4677888777766 677899999999999665
No 151
>2jne_A Hypothetical protein YFGJ; zinc fingers, two zinc, structural genomics, PSI-2, protein structure initiative; NMR {Escherichia coli} SCOP: g.41.18.1
Probab=21.17 E-value=6.8 Score=32.08 Aligned_cols=41 Identities=22% Similarity=0.470 Sum_probs=26.5
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016624 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
+..||+|..++.. .=++.+|..|-.. ++....||.|.++|.
T Consensus 32 ~~~CP~Cq~eL~~-------~g~~~hC~~C~~~-f~~~a~CPdC~q~Le 72 (101)
T 2jne_A 32 ELHCPQCQHVLDQ-------DNGHARCRSCGEF-IEMKALCPDCHQPLQ 72 (101)
T ss_dssp CCBCSSSCSBEEE-------ETTEEEETTTCCE-EEEEEECTTTCSBCE
T ss_pred cccCccCCCccee-------cCCEEECccccch-hhccccCcchhhHHH
Confidence 4799999988732 1134457777432 234457999988774
No 152
>2fiy_A Protein FDHE homolog; FDHE protein, structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pseudomonas aeruginosa} SCOP: e.59.1.1
Probab=21.03 E-value=7.6 Score=37.67 Aligned_cols=48 Identities=17% Similarity=0.274 Sum_probs=32.5
Q ss_pred CCCcccccccccccCCCCee----ecccCCcccHHHHHHHHhcCCCCCCCccc
Q 016624 30 SCDDACSICLEEFSESDPST----VTSCKHEFHLQCVLEWCQRSSQCPMCWQP 78 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~----vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~ 78 (386)
+....||||-..-... -+. .-.=.+.+|..|-.+|--....||.|-..
T Consensus 180 ~~~~~CPvCGs~P~~s-~l~~~g~~~G~R~l~Cs~C~t~W~~~R~~C~~Cg~~ 231 (309)
T 2fiy_A 180 ESRTLCPACGSPPMAG-MIRQGGKETGLRYLSCSLCACEWHYVRIKCSHCEES 231 (309)
T ss_dssp TTCSSCTTTCCCEEEE-EEEC----CCEEEEEETTTCCEEECCTTSCSSSCCC
T ss_pred ccCCCCCCCCCcCcee-EEeecCCCCCcEEEEeCCCCCEEeecCcCCcCCCCC
Confidence 5578999998764211 001 01112678889999998888899999665
No 153
>2jrp_A Putative cytoplasmic protein; two-zinc binding protein, structural genomics, PSI-2, protein structure initiative; NMR {Salmonella typhimurium LT2}
Probab=20.95 E-value=6.4 Score=31.11 Aligned_cols=40 Identities=20% Similarity=0.608 Sum_probs=20.5
Q ss_pred cccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016624 33 DACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
..||+|...+..... +.+|..|-..+. ....||-|.+++.
T Consensus 3 ~~CP~C~~~l~~~~~-------~~~C~~C~~~~~-~~afCPeCgq~Le 42 (81)
T 2jrp_A 3 ITCPVCHHALERNGD-------TAHCETCAKDFS-LQALCPDCRQPLQ 42 (81)
T ss_dssp CCCSSSCSCCEECSS-------EEECTTTCCEEE-EEEECSSSCSCCC
T ss_pred CCCCCCCCccccCCC-------ceECccccccCC-CcccCcchhhHHH
Confidence 678888877632211 233554533221 1225777766653
No 154
>2ffw_A Midline-1; B-BOX, ring finger, zinc-finger, ligase; NMR {Homo sapiens}
Probab=20.76 E-value=1.1e+02 Score=23.07 Aligned_cols=36 Identities=14% Similarity=0.415 Sum_probs=25.4
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHH
Q 016624 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLE 64 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~ 64 (386)
+..+..|.+|.+.-........+.|.-.||..|+..
T Consensus 27 ~~~~v~C~~C~~~~~~~A~ksCl~C~~s~C~~hl~~ 62 (78)
T 2ffw_A 27 SAEKVLCQFCDQDPAQDAVKTCVTCEVSYCDECLKA 62 (78)
T ss_dssp SSCCCBCSSCCSSSCCBCCEEETTTTEEECHHHHHH
T ss_pred CCCCccCCcCCCCCCCCCeeEccCccchhhhhhhHh
Confidence 344788999986420122346689999999999876
No 155
>3shb_A E3 ubiquitin-protein ligase UHRF1; unmodified histone, methylation, UHRF1, PHD, ligase-NUCL protein complex; 1.80A {Homo sapiens}
Probab=20.64 E-value=11 Score=29.17 Aligned_cols=27 Identities=26% Similarity=0.624 Sum_probs=18.6
Q ss_pred cccCCcccHHHHHHHHhc----C-CCCCCCcc
Q 016624 51 TSCKHEFHLQCVLEWCQR----S-SQCPMCWQ 77 (386)
Q Consensus 51 lpCgH~FC~~CI~~Wlq~----~-~sCP~CR~ 77 (386)
-.|...||..|+..-+.. . -.||.|+.
T Consensus 45 D~C~~~yH~~Cl~PpL~~~P~g~~W~C~~C~~ 76 (77)
T 3shb_A 45 DECDMAFHIYCLDPPLSSVPSEDEWYCPECRN 76 (77)
T ss_dssp TTTCCEEETTTSSSCCSSCCSSSCCCCTTTC-
T ss_pred CCCCCccCcccCCCcccCCCCCCceECcCccc
Confidence 357789999999865543 1 36888864
Done!