Query 016627
Match_columns 386
No_of_seqs 293 out of 1475
Neff 5.7
Searched_HMMs 29240
Date Mon Mar 25 16:46:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016627.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016627hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3dup_A MUTT/nudix family prote 100.0 1E-72 3.6E-77 552.3 34.6 282 93-383 3-285 (300)
2 2pny_A Isopentenyl-diphosphate 99.9 1.7E-26 5.8E-31 219.5 19.5 170 187-362 36-226 (246)
3 2dho_A Isopentenyl-diphosphate 99.9 3.4E-26 1.2E-30 215.9 19.1 171 186-362 24-215 (235)
4 1hzt_A Isopentenyl diphosphate 99.9 1.4E-22 4.9E-27 182.4 14.2 166 187-360 2-170 (190)
5 2fkb_A Putative nudix hydrolas 99.9 2.6E-21 8.8E-26 171.7 16.4 165 187-367 8-172 (180)
6 1q27_A Putative nudix hydrolas 99.8 1.8E-20 6E-25 165.0 16.1 147 186-344 4-151 (171)
7 1sjy_A MUTT/nudix family prote 99.7 1.5E-16 5E-21 137.3 16.1 142 214-366 10-155 (159)
8 1ktg_A Diadenosine tetraphosph 99.6 1.6E-14 5.4E-19 121.6 15.9 116 218-343 4-120 (138)
9 3shd_A Phosphatase NUDJ; nudix 99.6 2.5E-14 8.7E-19 122.9 14.8 123 223-360 9-131 (153)
10 2b0v_A Nudix hydrolase; struct 99.6 2.3E-14 7.9E-19 122.7 13.6 123 226-360 15-137 (153)
11 1v8y_A ADP-ribose pyrophosphat 99.6 2.7E-14 9.1E-19 125.8 13.3 128 219-361 36-164 (170)
12 1nqz_A COA pyrophosphatase (MU 99.6 7.6E-15 2.6E-19 132.0 9.5 107 228-342 44-152 (194)
13 3o6z_A GDP-mannose pyrophospha 99.6 2.3E-14 8E-19 129.7 12.7 138 218-367 46-191 (191)
14 3i7u_A AP4A hydrolase; nudix p 99.6 3.2E-14 1.1E-18 121.8 12.7 106 224-343 9-114 (134)
15 3u53_A BIS(5'-nucleosyl)-tetra 99.5 7.1E-14 2.4E-18 121.3 13.8 104 229-343 21-127 (155)
16 3grn_A MUTT related protein; s 99.5 1.1E-13 3.9E-18 119.2 15.0 116 233-363 21-136 (153)
17 3gwy_A Putative CTP pyrophosph 99.5 3.9E-14 1.3E-18 120.4 11.7 104 225-341 12-116 (140)
18 2pbt_A AP4A hydrolase; nudix p 99.5 7.2E-14 2.5E-18 116.8 13.0 107 222-342 7-113 (134)
19 3e57_A Uncharacterized protein 99.5 8.6E-15 3E-19 136.4 7.6 141 202-356 52-200 (211)
20 3oga_A Nucleoside triphosphata 99.5 4.6E-14 1.6E-18 123.2 11.2 118 216-341 26-149 (165)
21 2yvp_A NDX2, MUTT/nudix family 99.5 2.2E-14 7.6E-19 127.5 9.3 121 219-352 43-164 (182)
22 1rya_A GDP-mannose mannosyl hy 99.5 1.9E-13 6.6E-18 117.7 14.2 104 233-341 31-138 (160)
23 3son_A Hypothetical nudix hydr 99.5 7E-13 2.4E-17 113.5 16.1 114 219-343 7-126 (149)
24 3i9x_A MUTT/nudix family prote 99.5 3.7E-14 1.3E-18 127.1 7.9 116 219-340 29-154 (187)
25 4dyw_A MUTT/nudix family prote 99.5 1.2E-13 4.1E-18 120.3 10.9 103 228-340 38-140 (157)
26 1g0s_A Hypothetical 23.7 kDa p 99.5 2.1E-13 7.3E-18 125.3 13.0 133 219-362 59-199 (209)
27 2w4e_A MUTT/nudix family prote 99.5 1.3E-13 4.5E-18 118.5 10.1 122 219-355 7-130 (145)
28 2o1c_A DATP pyrophosphohydrola 99.5 4E-13 1.4E-17 113.9 12.9 114 219-342 11-133 (150)
29 3r03_A Nudix hydrolase; struct 99.5 1.9E-13 6.7E-18 115.7 10.9 99 233-341 21-119 (144)
30 2pqv_A MUTT/nudix family prote 99.5 2.9E-13 1E-17 116.5 10.7 106 223-341 23-129 (154)
31 3eds_A MUTT/nudix family prote 99.4 7E-14 2.4E-18 121.1 6.4 100 232-343 33-137 (153)
32 3hhj_A Mutator MUTT protein; n 99.4 4.5E-13 1.6E-17 116.0 11.5 100 232-341 41-140 (158)
33 2rrk_A ORF135, CTP pyrophospho 99.4 5.8E-13 2E-17 112.0 11.6 100 228-341 18-117 (140)
34 1vcd_A NDX1; nudix protein, di 99.4 5.4E-13 1.8E-17 110.5 11.0 94 233-342 15-108 (126)
35 1vhz_A ADP compounds hydrolase 99.4 1.7E-13 5.7E-18 125.0 8.2 114 233-356 61-174 (198)
36 3fcm_A Hydrolase, nudix family 99.4 8.2E-13 2.8E-17 119.4 11.6 105 232-344 58-170 (197)
37 3exq_A Nudix family hydrolase; 99.4 3.2E-13 1.1E-17 118.1 8.5 114 232-362 23-136 (161)
38 1mk1_A ADPR pyrophosphatase; n 99.4 3.4E-13 1.1E-17 123.4 8.7 136 219-367 45-185 (207)
39 3ees_A Probable pyrophosphohyd 99.4 7E-13 2.4E-17 113.0 10.1 100 228-341 31-130 (153)
40 3q91_A Uridine diphosphate glu 99.4 7E-13 2.4E-17 123.6 10.9 112 247-365 94-212 (218)
41 2azw_A MUTT/nudix family prote 99.4 1.2E-12 4E-17 111.2 10.5 99 233-343 32-132 (148)
42 1f3y_A Diadenosine 5',5'''-P1, 99.4 3.9E-13 1.3E-17 115.9 7.7 121 213-344 10-148 (165)
43 1mut_A MUTT, nucleoside tripho 99.4 8E-14 2.7E-18 115.5 2.3 97 233-341 17-113 (129)
44 3q93_A 7,8-dihydro-8-oxoguanin 99.4 1.6E-12 5.6E-17 115.8 10.6 125 221-364 27-151 (176)
45 2jvb_A Protein PSU1, mRNA-deca 99.4 5.7E-12 1.9E-16 107.3 13.4 98 232-344 17-117 (146)
46 3h95_A Nucleoside diphosphate- 99.4 3.2E-12 1.1E-16 115.9 12.1 103 233-344 40-143 (199)
47 2b06_A MUTT/nudix family prote 99.4 9.7E-13 3.3E-17 113.1 8.0 97 232-341 23-119 (155)
48 2yyh_A MUTT domain, 8-OXO-DGTP 99.4 2.6E-12 8.8E-17 108.7 10.1 93 234-339 27-119 (139)
49 3f6a_A Hydrolase, nudix family 99.3 4.1E-12 1.4E-16 110.2 10.8 105 225-341 12-133 (159)
50 3id9_A MUTT/nudix family prote 99.3 2.5E-12 8.4E-17 112.8 9.2 106 222-341 26-135 (171)
51 2fml_A MUTT/nudix family prote 99.3 3.7E-12 1.3E-16 122.0 10.4 137 218-362 40-196 (273)
52 3gg6_A Nudix motif 18, nucleos 99.3 3.6E-12 1.2E-16 109.9 8.9 100 232-344 32-133 (156)
53 3gz5_A MUTT/nudix family prote 99.3 4.2E-12 1.4E-16 119.4 9.6 112 219-339 24-137 (240)
54 3fk9_A Mutator MUTT protein; s 99.3 6.5E-12 2.2E-16 113.3 10.3 104 224-340 9-113 (188)
55 2qjt_B Nicotinamide-nucleotide 99.3 2.1E-11 7E-16 119.0 14.6 127 226-360 215-345 (352)
56 2kdv_A RNA pyrophosphohydrolas 99.3 7.3E-12 2.5E-16 110.3 10.1 112 219-342 10-136 (164)
57 2fb1_A Conserved hypothetical 99.3 2.8E-12 9.5E-17 119.6 6.9 113 219-340 15-127 (226)
58 2qjo_A Bifunctional NMN adenyl 99.3 1.8E-11 6E-16 118.7 12.7 108 226-341 210-322 (341)
59 2dsc_A ADP-sugar pyrophosphata 99.3 1.7E-11 5.7E-16 112.5 11.6 114 219-343 63-185 (212)
60 2fvv_A Diphosphoinositol polyp 99.3 3.9E-12 1.3E-16 115.8 6.9 102 229-344 51-153 (194)
61 3cng_A Nudix hydrolase; struct 99.3 1.8E-11 6.2E-16 110.0 10.5 98 226-339 47-144 (189)
62 1u20_A U8 snoRNA-binding prote 99.2 1E-11 3.5E-16 114.4 7.3 124 231-368 55-197 (212)
63 3o8s_A Nudix hydrolase, ADP-ri 99.2 6.1E-12 2.1E-16 115.0 5.7 115 214-342 65-180 (206)
64 1x51_A A/G-specific adenine DN 99.2 3.2E-11 1.1E-15 104.1 9.9 98 232-341 34-133 (155)
65 1vk6_A NADH pyrophosphatase; 1 99.2 2.8E-11 9.4E-16 116.3 9.7 96 228-340 149-245 (269)
66 3q1p_A Phosphohydrolase (MUTT/ 99.2 1.1E-11 3.9E-16 113.2 6.5 110 220-342 69-179 (205)
67 3f13_A Putative nudix hydrolas 99.2 6E-11 2E-15 105.0 10.6 84 228-334 25-108 (163)
68 3fjy_A Probable MUTT1 protein; 99.2 4.1E-11 1.4E-15 118.5 9.5 106 229-343 35-160 (364)
69 3qsj_A Nudix hydrolase; struct 99.2 3.8E-10 1.3E-14 106.3 15.4 131 232-363 24-210 (232)
70 2a6t_A SPAC19A8.12; alpha/beta 99.2 7.6E-11 2.6E-15 113.1 10.1 98 233-344 115-215 (271)
71 1k2e_A Nudix homolog; nudix/MU 99.1 6.8E-11 2.3E-15 102.5 8.1 99 225-340 7-118 (156)
72 2xsq_A U8 snoRNA-decapping enz 99.0 1.8E-10 6.1E-15 107.1 5.2 127 233-370 66-207 (217)
73 1q33_A Pyrophosphatase, ADP-ri 98.9 5.7E-09 1.9E-13 101.0 13.2 151 204-369 98-283 (292)
74 3fsp_A A/G-specific adenine gl 98.9 1.2E-09 4.2E-14 108.8 8.5 104 221-340 241-344 (369)
75 3kvh_A Protein syndesmos; NUDT 98.3 5E-07 1.7E-11 83.1 6.2 151 203-370 6-183 (214)
76 3bho_A Cleavage and polyadenyl 97.7 0.0002 6.7E-09 66.3 11.1 106 220-339 61-183 (208)
77 3rh7_A Hypothetical oxidoreduc 97.0 0.0015 5.1E-08 64.0 7.9 91 220-340 184-275 (321)
78 3hkl_A Muscle, skeletal recept 24.5 16 0.00054 33.2 0.0 40 28-71 157-196 (197)
No 1
>3dup_A MUTT/nudix family protein; nudix superfamily hydrolase, hydrolase 3 family, structural protein structure initiative, PSI; HET: MSE; 1.80A {Rhodospirillum rubrum atcc 11170}
Probab=100.00 E-value=1e-72 Score=552.26 Aligned_cols=282 Identities=41% Similarity=0.749 Sum_probs=266.3
Q ss_pred HHHHHHHHHhcCCCCCCCCeeeEEECCEEEeeecHHHHHHhhcCCCeEEeecCCCCcccceEEeccCCCCHHHHHHHHHH
Q 016627 93 RGYFEKIKICNRGSEMQSEFFPFIIEDQVVGYTHNRFASHLRKYDDVFIYSENNGGRFGSHLKLNSKLKTADERTRVVGE 172 (386)
Q Consensus 93 ~~~l~~i~~cn~~~~~~~~~~pf~v~g~~vG~i~p~~~~~L~~~~~~f~~~~~~~~~~~~~v~l~~~l~~~~~rt~~l~~ 172 (386)
|+|+++|++||+| .++.|+||+++|++||||+|.++++|..|+.+|.++. +.|+|.+.++++++||+++++
T Consensus 3 m~~l~~i~~~~~~--~~~~~~~f~~~g~~~G~i~~~~~~~l~~~~~~~~~~~-------~~v~l~~~~~~~~~rt~~~~~ 73 (300)
T 3dup_A 3 LSFLKHVQDCNTH--DLSNFVRFVIEGRRVGWVRKALAQRLKAHGRVFDVTR-------DAVLLSASLRTPQSRTRAVAD 73 (300)
T ss_dssp CCHHHHHHHTTCC--CCTTEEEEEETTEEEEEEEHHHHHHHTTCTTTEEECS-------SEEEECTTCCSHHHHHHHHHH
T ss_pred ccHHHHHHHHcCC--ChhhcEEEEECCEEEEeECHHHHHHHhcCCCceEeeC-------CEEEEecCCCCHHHHHHHHHH
Confidence 6899999999999 4788999999999999999999999999999998763 579999999999999999999
Q ss_pred HHHHHHHCCCCCCcccceeeeccCCCCceeEEEEcccccccCeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCccc
Q 016627 173 VIKCLGEEDLIPGIRNELYPVTSTFGSPIFFSLERAAAPYFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDH 252 (386)
Q Consensus 173 v~~~lr~~g~l~gwr~El~dVyd~~g~~~l~~ieRaa~~~~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~ 252 (386)
+++.|+++|+++|||||+|+|||++|.++++.+||++++++|+.|+|||+|+|+.++++.+|||||||++|++|||+||+
T Consensus 74 ~~~~~~~~g~~~gwr~E~~~V~~~~~~~~~~~~eR~~~~~~G~~~~~vh~~~~~~~~~~~~lll~rRs~~K~~~PG~wd~ 153 (300)
T 3dup_A 74 VVDRLADEGVVPAPRGELYRVNQSWGEPTLMLLDRAVVPTFGVRAYGVHLNGYVGAGADLHLWIGRRSPDKSVAPGKLDN 153 (300)
T ss_dssp HHHHHHHTTSSCCCCSCEEEECSSTTSCCCEEEEGGGTGGGTCCEEEEEEEEEESCGGGCEEEEEEECTTCSSSTTCEEE
T ss_pred HHHHHHHcCCCCccccccEEeecCCCCeeeEEEEhhhccccceEEEEEEEEEEEecCCeeEEEEEeCCCcccCCCCcccc
Confidence 99999999999999999999999998889999999999999999999999999975556799999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEE
Q 016627 253 LVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQL 332 (386)
Q Consensus 253 ~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~l 332 (386)
+||||+.+||++.+||+||++||+||+.+.+..+.+.|.++|.+..+.|+.+|++|+|++.++.++.|.++++||++++|
T Consensus 154 svaG~i~~GEs~~eaA~REl~EElGI~~~~~~~l~~~g~i~y~~~~~~G~~~E~~~vy~~~l~~~~~p~~~~~EV~~~~~ 233 (300)
T 3dup_A 154 MVAGGQPADLSLRQNLIKECAEEADLPEALARQAIPVGAITYCMESPAGIKPDTLFLYDLALPEDFRPHNTDGEMADFML 233 (300)
T ss_dssp SEEEECCTTSCHHHHHHHHHHHHHCCCHHHHTTCEEEEEEEEEEEETTEEEEEEEEEEEEECCTTCCCCCTTSSEEEEEE
T ss_pred ccccCCCCCCCHHHHHHHHHHHHhCCChhhhhhccccceEEEEEecCCCeEEEEEEEEEEEecCCCcCCCCchHhheEEE
Confidence 99999999999999999999999999987666678999999998877788999999999999999988889999999999
Q ss_pred EcHHHHHHHHHcCCCcccChHHHHHHHHHHcCCCCCCC-CCHHHHHhhccCC
Q 016627 333 IPVAHVANVIRRTGFFKPNCSLVIIDFLFRHGYICPEY-FGYLDLLQSLRSG 383 (386)
Q Consensus 333 vsleEv~~~l~~~~~Fkpn~~lVllDfliRhG~i~p~~-~~y~ei~~~l~~~ 383 (386)
++++|+.+++.++++|||||++|++|||+|||+|+|+| |+|.+|+++|||.
T Consensus 234 v~~~El~~~l~~pg~F~p~~~lV~ldfl~RhG~i~~~~~~~y~~i~~~l~r~ 285 (300)
T 3dup_A 234 WPAAKVVEAVRTTEAFKFNVNLTVIDFAIRHGLIDPDNEPDYQEILAGLRGR 285 (300)
T ss_dssp EEHHHHHHHHHHCCCBCTTHHHHHHHHHHHTTSSCTTTSTTHHHHHHHTBCC
T ss_pred ECHHHHHHHHhcCCCcCccHHHHHHHHHHHhCCcCCccCCCHHHHHHHhccC
Confidence 99999999998756999999999999999999999996 9999999999986
No 2
>2pny_A Isopentenyl-diphosphate delta-isomerase 2; carotenoid biosynthesis, cholesterol biosynthesis, isomerase isoprene biosynthesis, lipid synthesis; HET: GOL; 1.81A {Homo sapiens}
Probab=99.94 E-value=1.7e-26 Score=219.52 Aligned_cols=170 Identities=13% Similarity=0.127 Sum_probs=142.7
Q ss_pred ccceeeeccCCCCceeEEEEccccc-----ccCeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCC
Q 016627 187 RNELYPVTSTFGSPIFFSLERAAAP-----YFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHG 261 (386)
Q Consensus 187 r~El~dVyd~~g~~~l~~ieRaa~~-----~~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aG 261 (386)
++|+++|||++| ++++.++|..++ ..|+.|.++++.++. .+| +||||||+..|.+|||+||+++|||+.+|
T Consensus 36 ~~E~~~lvd~~~-~~iG~~~r~~~h~~~~~~~g~~h~av~v~v~~-~~g--~lLLqrRs~~K~~~pG~W~~p~gG~v~~G 111 (246)
T 2pny_A 36 LEEMLIVVDEND-KVIGADTKRNCHLNENIEKGLLHRAFSVVLFN-TKN--RILIQQRSDTKVTFPGYFTDSCSSHPLYN 111 (246)
T ss_dssp TTCEEEEECTTC-CEEEEEEHHHHTBHHHHTTTCCEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCBCCSEEECCBSS
T ss_pred ccceEEEEcCCC-CEEEEEEhHHhccccccCCCcEEEEEEEEEEe-CCC--EEEEEEecCCCCCCCCceEeccCceeccC
Confidence 589999999998 688999999998 568999999987764 345 79999999999999999999999999999
Q ss_pred ------CCH---HHHHHHHHHhHhCCCCCcc--CCceeeeEEEEEEecCCc-eeeEEEEEEEEEcCCCCccCCCCCceee
Q 016627 262 ------IAC---GENIIKECEEEAGIPRSIS--NRARPVGAVSYMDINGFS-YKRDVLFCYDLKLPEDFVPKNQDGEVES 329 (386)
Q Consensus 262 ------Es~---~eaaiREl~EEaGL~~~~~--~~l~~~G~isy~~~~~~g-~~~Ev~~vydl~l~~~~~p~~~dgEVe~ 329 (386)
|++ .+||+||++||+||+.+.+ .++.+++.+.|......+ ...++.|+|.+..+.++.| +++||++
T Consensus 112 ~~E~~~Et~~~~~eAA~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~--~~~Ev~~ 189 (246)
T 2pny_A 112 PAELEEKDAIGVRRAAQRRLQAELGIPGEQISPEDIVFMTIYHHKAKSDRIWGEHEICYLLLVRKNVTLNP--DPSETKS 189 (246)
T ss_dssp HHHHCCGGGHHHHHHHHHHHHHHHCCCTTTCCGGGSEEEEEEEEEEESSSSBEEEEEEEEEEEECCCCCCC--CTTTEEE
T ss_pred CcccccccchhHHHHHHHHHHHHHCCCccccCccccEEEEEEEEEecCCCceeeeEEEEEEEEEECCCCCC--ChHHeeE
Confidence 897 9999999999999987632 246788888887765444 3468889998887655444 4789999
Q ss_pred EEEEcHHHHHHHHHcC----CCcccChHHHHHHHHHH
Q 016627 330 FQLIPVAHVANVIRRT----GFFKPNCSLVIIDFLFR 362 (386)
Q Consensus 330 f~lvsleEv~~~l~~~----~~Fkpn~~lVllDfliR 362 (386)
++|++++|+.+++.+. ..|+|++.+++.+||..
T Consensus 190 ~~wv~~eel~~~l~~~~~~~~~ftp~~~~i~~~~l~~ 226 (246)
T 2pny_A 190 ILYLSQEELWELLEREARGEVKVTPWLRTIAERFLYR 226 (246)
T ss_dssp EEEECHHHHHHHHHHHHHTSSCBCHHHHHHHHHTHHH
T ss_pred EEEEeHHHHHHHHHhccCCCceECHhHHHHHHHHHHH
Confidence 9999999999998761 28999999998888865
No 3
>2dho_A Isopentenyl-diphosphate delta-isomerase 1; alpha/beta protein; 1.60A {Homo sapiens} PDB: 2i6k_A* 2icj_A 2ick_A*
Probab=99.94 E-value=3.4e-26 Score=215.87 Aligned_cols=171 Identities=12% Similarity=0.190 Sum_probs=142.8
Q ss_pred cccceeeeccCCCCceeEEEEccccc-----ccCeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCC
Q 016627 186 IRNELYPVTSTFGSPIFFSLERAAAP-----YFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPH 260 (386)
Q Consensus 186 wr~El~dVyd~~g~~~l~~ieRaa~~-----~~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~a 260 (386)
-.+|+++|||++| ++++.++|..++ ..|+.|.+|++.++. .+| +|||+||+..|.+|||+||+++||++.+
T Consensus 24 ~~~E~~~lvd~~~-~~~G~~~r~~~h~~~~~~~g~~h~av~v~v~~-~~g--~lLLq~R~~~k~~~pg~W~~p~gG~v~~ 99 (235)
T 2dho_A 24 LLAEMCILIDEND-NKIGAETKKNCHLNENIEKGLLHRAFSVFLFN-TEN--KLLLQQRSDAKITFPGCFTNTCCSHPLS 99 (235)
T ss_dssp SSCCEEEEECTTC-CEEEEEEHHHHTBHHHHTTTCCEEEEEEEEEC-TTC--CEEEEEECTTCSSSTTCEESSEEECCBS
T ss_pred hcCcEEEEEcCCC-CEEEEEEhHHhccccccCCCceEEEEEEEEEc-CCC--EEEEEEecCcCCCCCCcEEeccCceecC
Confidence 4699999999998 688999999988 569999999987764 345 7999999999999999999999999999
Q ss_pred C------CCH---HHHHHHHHHhHhCCCCCcc--CCceeeeEEEEEEecCCc-eeeEEEEEEEEEcCCCCccCCCCCcee
Q 016627 261 G------IAC---GENIIKECEEEAGIPRSIS--NRARPVGAVSYMDINGFS-YKRDVLFCYDLKLPEDFVPKNQDGEVE 328 (386)
Q Consensus 261 G------Es~---~eaaiREl~EEaGL~~~~~--~~l~~~G~isy~~~~~~g-~~~Ev~~vydl~l~~~~~p~~~dgEVe 328 (386)
| |++ .+||+||++||+||+.+.+ .++.+++.+.|......+ ...++.++|.+..+.++.| +++||.
T Consensus 100 Ge~E~~~E~~~~~~~Aa~REl~EElGi~~~~v~~~~l~~l~~~~y~~~~~~~~~~~e~~~vf~~~~~~~~~~--~~~Ev~ 177 (235)
T 2dho_A 100 NPAELEESDALGVRRAAQRRLKAELGIPLEEVPPEEINYLTRIHYKAQSDGIWGEHEIDYILLVRMNVTLNP--DPNEIK 177 (235)
T ss_dssp SHHHHCCGGGHHHHHHHHHHHHHHHCCCGGGSCGGGSEEEEEEEEEEECSSSBEEEEEEEEEEEECCCCCCC--CTTTEE
T ss_pred CCcccccccchhHHHHHHHHHHHHHCCCccccChhhcEEEEEEEEeccCCCccceeEEEEEEEEEECCCCcC--ChHHEE
Confidence 9 884 9999999999999987632 246788988887765444 3467889998887655444 578999
Q ss_pred eEEEEcHHHHHHHHHcC----CCcccChHHHHHHHHHH
Q 016627 329 SFQLIPVAHVANVIRRT----GFFKPNCSLVIIDFLFR 362 (386)
Q Consensus 329 ~f~lvsleEv~~~l~~~----~~Fkpn~~lVllDfliR 362 (386)
+++|++++|+.+++.+. ..|+|++.+++.+||..
T Consensus 178 ~~~wv~~~el~~~l~~~~~~~~~ftp~~~~i~~~~L~~ 215 (235)
T 2dho_A 178 SYCYVSKEELKELLKKAASGEIKITPWFKIIAATFLFK 215 (235)
T ss_dssp EEEEECHHHHHHHHHHHHTTSSCBCHHHHHHHHHTHHH
T ss_pred EEEEEcHHHHHHHHhhccCCCcEECHhHHHHHHHHHHH
Confidence 99999999999998761 28999999998888865
No 4
>1hzt_A Isopentenyl diphosphate delta-isomerase; dimethylallyl, isoprenoids; 1.45A {Escherichia coli} SCOP: d.113.1.2 PDB: 1hx3_A 1r67_A 1x84_A* 1x83_A* 1ppv_A* 1nfz_A* 1nfs_A* 1ppw_A* 1pvf_A 2veh_A* 2vej_A 2vnp_A* 2vnq_A 2g74_A 2g73_A* 2b2k_A 1i9a_A 1q54_A* 1ow2_A* 3hyq_A*
Probab=99.89 E-value=1.4e-22 Score=182.36 Aligned_cols=166 Identities=19% Similarity=0.182 Sum_probs=105.2
Q ss_pred ccceeeeccCCCCceeEEEEccccc-ccCeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHH
Q 016627 187 RNELYPVTSTFGSPIFFSLERAAAP-YFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACG 265 (386)
Q Consensus 187 r~El~dVyd~~g~~~l~~ieRaa~~-~~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~ 265 (386)
.+|+++|||.+| .+++.++|..++ ..|..+.+|.+.++. .+| +++++||+..|..+||+|+.++||+++.||++.
T Consensus 2 ~~E~~~v~d~~~-~~~g~~~r~~~~~~~~~~~~~v~~~i~~-~~g--~vLl~~R~~~~~~~~g~w~~~PgG~ve~gEt~~ 77 (190)
T 1hzt_A 2 QTEHVILLNAQG-VPTGTLEKYAAHTADTRLHLAFSSWLFN-AKG--QLLVTRRALSKKAWPGVWTNSVCGHPQLGESNE 77 (190)
T ss_dssp ------------------------------CEECEEEEEEC-TTC--CEEEEEECTTCSSSTTCEEESEEECCCTTCCHH
T ss_pred CceEEEEECCCC-CEeeeEEHhhhcccCCceEEEEEEEEEc-CCC--EEEEEEeCCCCCCCCCcccCcccccCCCCCCHH
Confidence 479999999998 677889999998 899988887775543 244 799999999999999999866999999999999
Q ss_pred HHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCc-eeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHc
Q 016627 266 ENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFS-YKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 266 eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g-~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
+||+||++||+||..... ...++.+.|....+.+ ....+.++|.+.++..+.+ +++|+.+++|++++|+.+++.+
T Consensus 78 ~aa~REl~EEtGl~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~ 153 (190)
T 1hzt_A 78 DAVIRRCRYELGVEITPP--ESIYPDFRYRATDPSGIVENEVCPVFAARTTSALQI--NDDEVMDYQWCDLADVLHGIDA 153 (190)
T ss_dssp HHHHHHHHHHHCCCBSCC--EEEETTCEEEEECTTSCEEEEECCEEEEEBCSCCCC--CTTTEEEEEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCchhh--heeeeeEEEEeeCCCCCcceEEEEEEEEecCCCCcC--CccceeeEEEecHHHHHHHHHc
Confidence 999999999999987752 1566666665443322 2345678888888655444 4689999999999999999987
Q ss_pred C-CCcccChHHHHHHHH
Q 016627 345 T-GFFKPNCSLVIIDFL 360 (386)
Q Consensus 345 ~-~~Fkpn~~lVllDfl 360 (386)
+ ..|.|....++-.++
T Consensus 154 ~~~~~~p~~~~~~~~~~ 170 (190)
T 1hzt_A 154 TPWAFSPWMVMQATNRE 170 (190)
T ss_dssp CGGGBCHHHHHHHHSHH
T ss_pred ChhhcCchHHHHHHHHH
Confidence 2 248897766544443
No 5
>2fkb_A Putative nudix hydrolase YFCD; putative protein, MAD, structural genomics, escherichia coli putative nudix hydrolase, PSI; HET: MSE; 2.00A {Escherichia coli K12} SCOP: d.113.1.2
Probab=99.87 E-value=2.6e-21 Score=171.70 Aligned_cols=165 Identities=17% Similarity=0.132 Sum_probs=126.8
Q ss_pred ccceeeeccCCCCceeEEEEcccccccCeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHH
Q 016627 187 RNELYPVTSTFGSPIFFSLERAAAPYFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGE 266 (386)
Q Consensus 187 r~El~dVyd~~g~~~l~~ieRaa~~~~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~e 266 (386)
.+|+++|+|.+| .+.+.++|..++..|+.+.++.+.++. .+| ++++++|+..+..+||+|+..+||+++.||++.+
T Consensus 8 ~~E~~~i~d~~~-~~~g~~~r~~~~~~~~~~~~~~v~i~~-~~~--~vLl~~R~~~~~~~~g~w~l~pGG~ve~gE~~~~ 83 (180)
T 2fkb_A 8 STEWVDIVNEEN-EVIAQASREQMRAQCLRHRATYIVVHD-GMG--KILVQRRTETKDFLPGMLDATAGGVVQADEQLLE 83 (180)
T ss_dssp CCCEEEEECTTS-CEEEEEEHHHHHHHTCCEEEEEEEEEC-SSS--CEEEEEECSSCSSSTTCEESSBCCBCBTTCCHHH
T ss_pred CCeeEEEECCCC-CEeeEEEHHHhhccCceeeEEEEEEEC-CCC--EEEEEECCCCCccCCCcEEeecCCCCCCCCCHHH
Confidence 589999999998 678899999999999988887776543 244 7999999998888999998669999999999999
Q ss_pred HHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCC
Q 016627 267 NIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTG 346 (386)
Q Consensus 267 aaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~ 346 (386)
||+||++||+||.... +..++.+.+.. +. ...+.++|.+.....+.+ +++|+.++.|++++|+.+++.
T Consensus 84 aa~REl~EEtGl~~~~---~~~l~~~~~~~--~~--~~~~~~~f~~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~--- 151 (180)
T 2fkb_A 84 SARREAEEELGIAGVP---FAEHGQFYFED--KN--CRVWGALFSCVSHGPFAL--QEDEVSEVCWLTPEEITARCD--- 151 (180)
T ss_dssp HHHHHHHHHHCCBSCC---CEEEEEEEEEE--TT--EEEEEEEEEEECCCCCCC--CTTTEEEEEEECHHHHHTTGG---
T ss_pred HHHHHHHHHHCCCccc---eEEEEEEEecC--CC--ceEEEEEEEEecCCCcCC--ChhHhheEEEecHHHHHHHHH---
Confidence 9999999999997654 35566554432 21 235567787775544433 468999999999999998775
Q ss_pred CcccChHHHHHHHHHHcCCCC
Q 016627 347 FFKPNCSLVIIDFLFRHGYIC 367 (386)
Q Consensus 347 ~Fkpn~~lVllDfliRhG~i~ 367 (386)
.|.|....++..++.+++-..
T Consensus 152 ~~~~~~~~~l~~~~~~~~~~~ 172 (180)
T 2fkb_A 152 EFTPDSLKALALWMKRNAKNE 172 (180)
T ss_dssp GBCHHHHHHHHHHHHHC----
T ss_pred HhCCcHHHHHHHHHHhhcCCC
Confidence 366766666666776665443
No 6
>1q27_A Putative nudix hydrolase DR0079; radiation resistance; NMR {Deinococcus radiodurans} SCOP: d.113.1.2 PDB: 2o5f_A
Probab=99.85 E-value=1.8e-20 Score=165.01 Aligned_cols=147 Identities=18% Similarity=0.259 Sum_probs=112.0
Q ss_pred cccceeeeccCCCCceeEEEEcccccccCeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHH
Q 016627 186 IRNELYPVTSTFGSPIFFSLERAAAPYFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACG 265 (386)
Q Consensus 186 wr~El~dVyd~~g~~~l~~ieRaa~~~~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~ 265 (386)
-++|+++|||.+| ++.+.++|..++++.-.+.+|.+.++. .+| ++|+.||+..+..+||+|++++||+++.||++.
T Consensus 4 ~~~E~~~~~d~~~-~~~g~~~r~~~~l~~~~~~~v~v~i~~-~~~--~vLl~~r~~~~~~~~g~w~~~PgG~ve~gEs~~ 79 (171)
T 1q27_A 4 VSDERLDLVNERD-EVVGQILRTDPALRWERVRVVNAFLRN-SQG--QLWIPRRSPSKSLFPNALDVSVGGAVQSGETYE 79 (171)
T ss_dssp CCSSEEEEESSSS-CEEEEEESSCTTSCTTSCEEEEEEEEE-TTT--EEEECCSCCSSSCCCCSCCCSEEEECSSSSCHH
T ss_pred ccceeeeeecCCC-CEeceEEhhhhccccccceEEEEEEEC-CCC--eEEEEEecCCCCCCCCccccccCccccCCCCHH
Confidence 3799999999998 577789999983332225555554443 355 899999999998999999889999999999999
Q ss_pred HHHHHHHHhHhCCCCCccCCceeeeEEE-EEEecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHc
Q 016627 266 ENIIKECEEEAGIPRSISNRARPVGAVS-YMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 266 eaaiREl~EEaGL~~~~~~~l~~~G~is-y~~~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
+||+||++||+||..... .+.+++.+. |.. .. ..+.++|.+..+..+.+ +++|+.+++|++++|+.+++..
T Consensus 80 ~aa~REl~EEtGl~~~~~-~l~~~~~~~~~~~--~~---~~~~~~f~~~~~~~~~~--~~~E~~~~~W~~~~el~~~~~~ 151 (171)
T 1q27_A 80 EAFRREAREELNVEIDAL-SWRPLASFSPFQT--TL---SSFMCVYELRSDATPIF--NPNDISGGEWLTPEHLLARIAA 151 (171)
T ss_dssp HHHHHHHHHHHSCTTSSS-CEEEEEEECSSSS--CC---SSEEEEEEEECCCCCCS--CTTTCSCCEEECHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCccccc-ceEEEEEEeccCC--CC---ccEEEEEEEEECCcccc--CchhhheEEEecHHHHHHHHhc
Confidence 999999999999988753 245555443 221 11 12678888887544443 3689999999999999988775
No 7
>1sjy_A MUTT/nudix family protein; nudix fold, alpha-beta-alpha sandwich, structural genomics, BSGC structure funded by NIH; 1.39A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1soi_A 1su2_A* 1sz3_A*
Probab=99.72 E-value=1.5e-16 Score=137.29 Aligned_cols=142 Identities=12% Similarity=0.117 Sum_probs=99.6
Q ss_pred CeeeeEEEEEEEEEeCCeEEEEEEecCCC--CCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeE
Q 016627 214 GIKAYGVHMNGYVEKDGQKFLWIGKRSQV--KPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA 291 (386)
Q Consensus 214 Gi~~~gVHlngyv~~dg~~~LwvqrRS~~--K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~ 291 (386)
.+.+.++.+.++. .+| ++++.||+.. |..+||+|+ ++||+++.||++.+||+||+.||+|+.... ...++.
T Consensus 10 ~~~~~~~~~vi~~-~~~--~vLl~~r~~~~~~~~~~~~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~l~~ 82 (159)
T 1sjy_A 10 PVELRAAGVVLLN-ERG--DILLVQEKGIPGHPEKAGLWH-IPSGAVEDGENPQDAAVREACEETGLRVRP---VKFLGA 82 (159)
T ss_dssp CCCEEEEEEEEBC-TTC--CEEEEEESCC----CCCCCEE-CSEEECCTTSCHHHHHHHHHHHHHSCCEEE---EEEEEE
T ss_pred CeEEEeEEEEEEe-CCC--CEEEEEecccCcCCCCCCeEE-CCccccCCCCCHHHHHHHHHHHHHCcccee---eEEEEE
Confidence 3445555544332 244 7899999863 678999996 789999999999999999999999998764 456666
Q ss_pred EEEEEecCCceeeEEEEEEEEEcCCCCccCC-CCCceeeEEEEcHHHHHHHHHcCCCcccChHHH-HHHHHHHcCCC
Q 016627 292 VSYMDINGFSYKRDVLFCYDLKLPEDFVPKN-QDGEVESFQLIPVAHVANVIRRTGFFKPNCSLV-IIDFLFRHGYI 366 (386)
Q Consensus 292 isy~~~~~~g~~~Ev~~vydl~l~~~~~p~~-~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lV-llDfliRhG~i 366 (386)
+.+.+.. + .....++|.+.+..+..+.+ .++|+.++.|++++|+.+++.. +.++...... +.+++.+.|+-
T Consensus 83 ~~~~~~~--~-~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~~~~~~~~~~~~~~~p 155 (159)
T 1sjy_A 83 YLGRFPD--G-VLILRHVWLAEPEPGQTLAPAFTDEIAEASFVSREDFAQLYAA-GQIRMYQTKLFYADALREKGFP 155 (159)
T ss_dssp EEEECTT--S-CEEEEEEEEEEECSSCCCCCCCCSSEEEEEEECHHHHHHHHHT-TCBSCTHHHHHHHHHHHHHTCC
T ss_pred EecccCC--C-ceEEEEEEEEEccCCCccccCCCCceeEEEEecHHHHHHhhhc-ccchhhhhHHHHHHHHhcCCCC
Confidence 6554322 2 24567888888754332343 4789999999999999999987 5676654443 44555556653
No 8
>1ktg_A Diadenosine tetraphosphate hydrolase; nudix, AMP, magnesium cluster; HET: AMP; 1.80A {Caenorhabditis elegans} SCOP: d.113.1.1 PDB: 1kt9_A*
Probab=99.61 E-value=1.6e-14 Score=121.65 Aligned_cols=116 Identities=14% Similarity=0.067 Sum_probs=83.5
Q ss_pred eEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCc-eeeeEEEEEE
Q 016627 218 YGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRA-RPVGAVSYMD 296 (386)
Q Consensus 218 ~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l-~~~G~isy~~ 296 (386)
.++.+.++...+++.++++.||+. .||+|+ ++||+++.||++.+||+||++||+|+..+.+... .+.+.+.|..
T Consensus 4 ~~~~~vi~~~~~~~~~vLl~~r~~----~~~~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~~~~~~~~~~~~~~ 78 (138)
T 1ktg_A 4 KAAGLVIYRKLAGKIEFLLLQASY----PPHHWT-PPKGHVDPGEDEWQAAIRETKEEANITKEQLTIHEDCHETLFYEA 78 (138)
T ss_dssp EEEEEEEEEEETTEEEEEEEEESS----TTCCEE-SSEEECCTTCCHHHHHHHHHHHHHCCCGGGEEEEEEEEEEEEEEE
T ss_pred EEEEEEEEEecCCCcEEEEEEccC----CCCcEe-CCccccCCCCCHHHHHHHHHHHHHCCCccceEEeccccceEEEEe
Confidence 355666665445567899999862 378996 7999999999999999999999999976543222 3445555543
Q ss_pred ecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHH
Q 016627 297 INGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 297 ~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
. +. ....++|.+.++.+ .+...++|+.+++|++++|+.+++.
T Consensus 79 ~---~~-~~~~~~f~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~~~ 120 (138)
T 1ktg_A 79 K---GK-PKSVKYWLAKLNNP-DDVQLSHEHQNWKWCELEDAIKIAD 120 (138)
T ss_dssp T---TE-EEEEEEEEEEECSC-CCCCCCTTEEEEEEECHHHHHHHHC
T ss_pred C---CC-ceEEEEEEEEecCC-cccCCCchhcEeEeccHHHHHHhhc
Confidence 2 12 34567788887653 2233468999999999999998763
No 9
>3shd_A Phosphatase NUDJ; nudix fold, nudix motif, hydrolase, (D)NDP/(D)NTP binding, dephosphorylation; 2.50A {Escherichia coli} PDB: 3dku_A
Probab=99.58 E-value=2.5e-14 Score=122.86 Aligned_cols=123 Identities=13% Similarity=0.180 Sum_probs=86.5
Q ss_pred EEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCce
Q 016627 223 NGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSY 302 (386)
Q Consensus 223 ngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~ 302 (386)
.+.+.++| ++++.||+ ...+|.|. ++||+++.||++.+||+||++||+|+.... ...++...|.....
T Consensus 9 ~~ii~~~~--~vLl~~r~---~~~~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~--- 76 (153)
T 3shd_A 9 ACVVHAEG--KFLVVEET---INGKALWN-QPAGHLEADETLVEAAARELWEETGISAQP---QHFIRMHQWIAPDK--- 76 (153)
T ss_dssp EEEEEETT--EEEEEEEE---ETTEEEEE-CSEEECCTTCCHHHHHHHHHHHHHCCCCCC---CEEEEEEEECCTTS---
T ss_pred EEEEEeCC--EEEEEEec---CCCCCCEE-CCeEEeCCCCCHHHHHHHHHHHHHCccccc---CcEEEEEEEecCCC---
Confidence 33444466 79999987 35688996 889999999999999999999999998765 35566655544322
Q ss_pred eeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHH
Q 016627 303 KRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFL 360 (386)
Q Consensus 303 ~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfl 360 (386)
...+.++|.+.+.....+.++++|+.+++|++++|+ ........|.....+.+|+
T Consensus 77 ~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el---~~~~~~~~~~~~~~l~~~~ 131 (153)
T 3shd_A 77 TPFLRFLFAIELEQICPTQPHDSDIDCCRWVSAEEI---LQASNLRSPLVAESIRCYQ 131 (153)
T ss_dssp CCEEEEEEEEECSSCCCCCCCSTTCCEEEEECHHHH---HTCSCBSSTHHHHHHHHHH
T ss_pred ceEEEEEEEEEccccCcCCCCcccceeeEEecHHHh---hccccccCchHHHHHHHHH
Confidence 235567888888655334445789999999999998 2222234454444444444
No 10
>2b0v_A Nudix hydrolase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, U function; 1.55A {Nitrosomonas europaea} SCOP: d.113.1.1
Probab=99.57 E-value=2.3e-14 Score=122.70 Aligned_cols=123 Identities=14% Similarity=0.066 Sum_probs=85.2
Q ss_pred EEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeE
Q 016627 226 VEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRD 305 (386)
Q Consensus 226 v~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~E 305 (386)
+.++| ++++.||+..+. +|+|+ ++||+++.||++.+||+||++||+||.... ...++.+.|..... .. ..
T Consensus 15 i~~~~--~vLl~~r~~~~~--~~~w~-lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~-~~-~~ 84 (153)
T 2b0v_A 15 IEQDD--KYLLVEEIPRGT--AIKLN-QPAGHLEPGESIIQACSREVLEETGHSFLP---EVLTGIYHWTCASN-GT-TY 84 (153)
T ss_dssp CEETT--EEEEEEECSSSS--CCEEE-CSEEECCTTSCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEETTT-TE-EE
T ss_pred EeeCC--EEEEEEEcCCCC--CCeEE-CCCcCcCCCCCHHHHHHHHHHHhhCcEecc---ceEEEEEEEeCCCC-Cc-EE
Confidence 33466 799999987643 89996 789999999999999999999999998764 35566665554331 22 23
Q ss_pred EEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHH
Q 016627 306 VLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFL 360 (386)
Q Consensus 306 v~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfl 360 (386)
+.++|.+.+.......+.++|+.+++|++++|+.++... .+.|....++.+|+
T Consensus 85 ~~~~f~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~~~~--~~~~~~~~~l~~~~ 137 (153)
T 2b0v_A 85 LRFTFSGQVVSFDPDRKLDTGIVRAAWFSIDEIRAKQAM--HRTPLVMQCIEDYH 137 (153)
T ss_dssp EEEEEEEEEEEECTTSCCCTTEEEEEEEEHHHHHHTGGG--BSSTHHHHHHHHHH
T ss_pred EEEEEEEEeCCCCCCCCCCCCeeeEEEecHHHHhhhhcc--cCcHHHHHHHHHHH
Confidence 456677776433222334789999999999999987322 34454444444443
No 11
>1v8y_A ADP-ribose pyrophosphatase; nudix motif, loop-helix-loop, MUTT family, riken structural genomics/proteomics initiative, RSGI; HET: APR; 1.65A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1v8v_A* 1v8n_A 1v8l_A* 1v8m_A* 1v8i_A 1v8r_A* 1v8s_A* 1v8t_A* 1v8w_A 1v8u_A
Probab=99.56 E-value=2.7e-14 Score=125.85 Aligned_cols=128 Identities=12% Similarity=0.112 Sum_probs=83.0
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEec
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDIN 298 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~ 298 (386)
+|.+.++ ++| ++++.||... ..+||+|+ ++||+++.||++.+||+||+.||+|+ ... +.+++.+. ..
T Consensus 36 ~v~vii~--~~~--~vLL~~~~r~-~~~~~~w~-lPgG~ve~gEs~~~aa~REl~EEtGl-~~~---~~~l~~~~---~~ 102 (170)
T 1v8y_A 36 AVAVIAL--REG--RMLFVRQMRP-AVGLAPLE-IPAGLIEPGEDPLEAARRELAEQTGL-SGD---LTYLFSYF---VS 102 (170)
T ss_dssp EEEEEEE--ETT--EEEEEECCBT-TTTBCCBB-CSEEECCTTCCHHHHHHHHHHHHHSE-EEE---EEEEEEEE---SC
T ss_pred eEEEEEE--ECC--EEEEEEEEeC-CCCCCEEE-CCccccCCCCCHHHHHHHHHHHHHCC-CcC---ceeeEEEe---cC
Confidence 4444444 355 7888777544 36899996 88999999999999999999999999 543 45555432 11
Q ss_pred CCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcc-cChHHHHHHHHH
Q 016627 299 GFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFK-PNCSLVIIDFLF 361 (386)
Q Consensus 299 ~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fk-pn~~lVllDfli 361 (386)
. +.....+++|.+....+..+..+++|+.++.|++++|+.+++.+ +.+. ....+..+-++.
T Consensus 103 ~-~~~~~~~~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~~~~~al~~~~ 164 (170)
T 1v8y_A 103 P-GFTDEKTHVFLAENLKEVEAHPDEDEAIEVVWMRPEEALERHQR-GEVEFSATGLVGVLYYH 164 (170)
T ss_dssp T-TTBCCEEEEEEEEEEEECC--------CEEEEECHHHHHHHHHT-TSCCBCHHHHHHHHHHH
T ss_pred C-CccccEEEEEEEEeccccCCCCCCCceEEEEEEEHHHHHHHHHC-CCEecCHHHHHHHHHHH
Confidence 1 22235567777765332222334689999999999999999998 6777 444444444443
No 12
>1nqz_A COA pyrophosphatase (MUTT/nudix family protein); D.radiodurans, hydrolase; 1.70A {Deinococcus radiodurans} SCOP: d.113.1.1 PDB: 1nqy_A
Probab=99.56 E-value=7.6e-15 Score=132.00 Aligned_cols=107 Identities=15% Similarity=0.151 Sum_probs=76.9
Q ss_pred eCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEE
Q 016627 228 KDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVL 307 (386)
Q Consensus 228 ~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~ 307 (386)
.+|+.++++.||+..+..+||+|+ ++||+++.||++.+||+||++||+||.... +..+|.+.+.... . ...+
T Consensus 44 ~~~~~~vLL~~r~~~~~~~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~~~~~~-~---~~~~ 115 (194)
T 1nqz_A 44 READPRVLLTVRSSELPTHKGQIA-FPGGSLDAGETPTQAALREAQEEVALDPAA---VTLLGELDDVFTP-V---GFHV 115 (194)
T ss_dssp SSSSCBBCEEEEC------CCCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCGGG---CEEEEECCCEEET-T---TEEE
T ss_pred cCCCeEEEEEEecCCCCCCCCeEE-CCcccCCCCCCHHHHHHHHHHHHHCCCccc---eEEEEEccCccCC-C---CeEE
Confidence 455557999999988888999997 889999999999999999999999998764 3556665443332 1 2456
Q ss_pred EEEEEEcCCCCc-cCCCCCceeeEEEEcHHHH-HHHH
Q 016627 308 FCYDLKLPEDFV-PKNQDGEVESFQLIPVAHV-ANVI 342 (386)
Q Consensus 308 ~vydl~l~~~~~-p~~~dgEVe~f~lvsleEv-~~~l 342 (386)
++|.+.++.+.. ...+++|+.++.|++++|+ .+.+
T Consensus 116 ~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~ 152 (194)
T 1nqz_A 116 TPVLGRIAPEALDTLRVTPEVAQIITPTLAELRAVPL 152 (194)
T ss_dssp EEEEEEECGGGGGGCCCCTTEEEEECCBHHHHHHSCC
T ss_pred EEEEEEecCCccccCCCccceeEEEEEEHHHhccCCC
Confidence 778787754333 3445789999999999998 6543
No 13
>3o6z_A GDP-mannose pyrophosphatase NUDK; nudix, hydrolase, biofilm; 2.05A {Escherichia coli} SCOP: d.113.1.1 PDB: 3o52_A* 1viu_A 3o69_A 3o61_A
Probab=99.56 E-value=2.3e-14 Score=129.69 Aligned_cols=138 Identities=13% Similarity=0.154 Sum_probs=96.0
Q ss_pred eEEEEEEEEEeCCeEEEEEEecCC--C--CCC-CCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEE
Q 016627 218 YGVHMNGYVEKDGQKFLWIGKRSQ--V--KPT-YPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV 292 (386)
Q Consensus 218 ~gVHlngyv~~dg~~~LwvqrRS~--~--K~t-~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~i 292 (386)
.+|.+..+...++ ++++.|+.. . +.. .+|.|. ++||+++ ||++.+||+||++||+|+.... +..+|.+
T Consensus 46 ~av~v~~~~~~~~--~vlLv~~~r~~~~~~~~~~~~~w~-lPgG~ve-gE~~~~aa~REl~EEtG~~~~~---~~~l~~~ 118 (191)
T 3o6z_A 46 NGATILLYNTKKK--TVVLIRQFRVATWVNGNESGQLIE-SCAGLLD-NDEPEVCIRKEAIEETGYEVGE---VRKLFEL 118 (191)
T ss_dssp CEEEEEEEETTTT--EEEEEEEECHHHHTTTCTTCEEEE-CEEEECC-SSCHHHHHHHHHHHHC-CCCSC---EEEEEEE
T ss_pred CEEEEEEEECCCC--EEEEEEcCCccccccCCCCCeEEE-ecceEeC-CCCHHHHHHHHHHHHhCCccCc---EEEEEEE
Confidence 3566655542234 566554432 1 122 788895 8899999 9999999999999999998754 4555542
Q ss_pred EEEEecCCceeeEEEEEEEEEcCCCCcc---CCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHHHHcCCCC
Q 016627 293 SYMDINGFSYKRDVLFCYDLKLPEDFVP---KNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFLFRHGYIC 367 (386)
Q Consensus 293 sy~~~~~~g~~~Ev~~vydl~l~~~~~p---~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfliRhG~i~ 367 (386)
+..+ +...+.+++|.+.......+ ...++|+.++.|++++|+.+++.+ ++++....++.+.++.+||++.
T Consensus 119 ---~~~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~-g~i~d~~t~~al~~~~~~~~~~ 191 (191)
T 3o6z_A 119 ---YMSP-GGVTELIHFFIAEYSDNQRANAGGGVEDEAIEVLELPFSQALEMIKT-GEIRDGKTVLLLNYLQTSHLMD 191 (191)
T ss_dssp ---ESCT-TTBCCEEEEEEEECCTTCC--------CCSSEEEEEEHHHHHHHHHH-SSCCBHHHHHHHHHHHHHSTTC
T ss_pred ---EeCC-CccCcEEEEEEEEEcccccccCCCCCCCcEEEEEEEEHHHHHHHHHc-CCCCCHHHHHHHHHHHHhCCCC
Confidence 2222 23356678888886432111 112689999999999999999998 7898888888999999999873
No 14
>3i7u_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, S genomics, NPPSFA, national project on protein structural AN functional analyses; HET: PGE PG4; 1.80A {Aquifex aeolicus} PDB: 3i7v_A*
Probab=99.56 E-value=3.2e-14 Score=121.82 Aligned_cols=106 Identities=21% Similarity=0.284 Sum_probs=76.6
Q ss_pred EEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCcee
Q 016627 224 GYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYK 303 (386)
Q Consensus 224 gyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~ 303 (386)
+.+.+|| ++++.||. .|.|. ++||+++.|||+.+||+||++|||||.... ...+|.+.|.+.......
T Consensus 9 ~vv~~~~--~vLL~~r~------~g~W~-~PgG~ve~gEt~~~aa~RE~~EEtGl~~~~---~~~l~~~~~~~~~~~~~~ 76 (134)
T 3i7u_A 9 GVLFKDG--EVLLIKTP------SNVWS-FPKGNIEPGEKPEETAVREVWEETGVKGEI---LDYIGEIHYWYTLKGERI 76 (134)
T ss_dssp EEEEETT--EEEEEECT------TSCEE-CCEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEEEETTEEE
T ss_pred EEEEECC--EEEEEEeC------CCcEE-CCeeEecCCCCHHHHHHHHHHHhcCceEEE---eeeeeeeeEEecCCCceE
Confidence 3444577 68888874 37885 899999999999999999999999998764 456777777654432222
Q ss_pred eEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHH
Q 016627 304 RDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 304 ~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
...++.|.+.... ..|++ ++|+.+++|++++|+.+++.
T Consensus 77 ~~~~~~f~~~~~~-~~~~~-~~E~~~~~W~~~~e~~~~l~ 114 (134)
T 3i7u_A 77 FKTVKYYLMKYKE-GEPRP-SWEVKDAKFFPIKEAKKLLK 114 (134)
T ss_dssp EEEEEEEEEEEEE-ECCCC-CTTSSEEEEEEHHHHHHHBC
T ss_pred EEEEEEEEEEEcC-CcCcC-ChhheEEEEEEHHHHhhhcC
Confidence 2334567776543 23343 36899999999999988753
No 15
>3u53_A BIS(5'-nucleosyl)-tetraphosphatase [asymmetrical]; hydrolase; 2.71A {Homo sapiens} PDB: 1xsa_A 1xsb_A 1xsc_A*
Probab=99.54 E-value=7.1e-14 Score=121.32 Aligned_cols=104 Identities=12% Similarity=0.087 Sum_probs=71.8
Q ss_pred CCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEE--EecCCceeeEE
Q 016627 229 DGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYM--DINGFSYKRDV 306 (386)
Q Consensus 229 dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~--~~~~~g~~~Ev 306 (386)
+++.++++.||+.. ||.|+ ++||+++.|||+.+||+||++|||||..... ..++.+.+. +..... ...
T Consensus 21 n~~~e~LL~~r~~~----~~~W~-lPgG~ve~gEt~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~~~~~~--~~~ 90 (155)
T 3u53_A 21 NNAIEFLLLQASDG----IHHWT-PPKGHVEPGEDDLETALRETQEEAGIEAGQL---TIIEGFKRELNYVARNK--PKT 90 (155)
T ss_dssp SCSEEEEEEEESSS----SCCEE-CSEEECCSSCCHHHHHHHHHHHHHCCCGGGE---EEEEEEEEEEEEEETTE--EEE
T ss_pred CCCcEEEEEEecCC----CCCEE-CCeeeccCCCCHHHHHHHHHHHHHCCccccc---eeeeeEeeeeecCCCcc--eeE
Confidence 66678888888643 58896 8999999999999999999999999987653 333333322 222211 222
Q ss_pred EEEEEEEcC-CCCccCCCCCceeeEEEEcHHHHHHHHH
Q 016627 307 LFCYDLKLP-EDFVPKNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 307 ~~vydl~l~-~~~~p~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
...|.+.+. .+..+.+ ++|+.+++|++++|+.+++.
T Consensus 91 ~~~~~~~~~~~~~~~~~-~~E~~~~~W~~~~ea~~~~~ 127 (155)
T 3u53_A 91 VIYWLAEVKDYDVEIRL-SHEHQAYRWLGLEEACQLAQ 127 (155)
T ss_dssp EEEEEEEESCTTCCCCC-CTTEEEEEEECHHHHHHHHC
T ss_pred EEEEEEEEeccCCccCC-CcceeEEEEeEHHHHHHHcC
Confidence 333444443 2333332 56999999999999998774
No 16
>3grn_A MUTT related protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 1.70A {Methanosarcina mazei}
Probab=99.54 E-value=1.1e-13 Score=119.19 Aligned_cols=116 Identities=17% Similarity=0.151 Sum_probs=83.4
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDL 312 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl 312 (386)
++++.||+..|..++|+|. ++||+++.||++.+||+||+.||+||.+... ..++.+.+.+.. ...+.++|.+
T Consensus 21 ~vLL~~r~~~~~~~~g~w~-~PgG~ve~gE~~~~aa~REl~EE~Gl~~~~~---~~~~~~~~~~~~----~~~~~~~~~~ 92 (153)
T 3grn_A 21 EFLLLRRSENSRTNAGKWD-LPGGKVNPDESLKEGVAREVWEETGITMVPG---DIAGQVNFELTE----KKVIAIVFDG 92 (153)
T ss_dssp CEEEEEECTTCSSSTTCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCCCCC---SEEEEEEEECSS----CEEEEEEEEE
T ss_pred cEEEEEEcCCCCCCCCeEE-CceeecCCCCCHHHHHHhhhhhhhCcEeecc---eEEEEEEEecCC----ceEEEEEEEE
Confidence 7999999988889999996 7899999999999999999999999988753 455655543321 1345677777
Q ss_pred EcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHHHHc
Q 016627 313 KLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFLFRH 363 (386)
Q Consensus 313 ~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfliRh 363 (386)
....+ .+.. ++|+.+++|++++|+.++. .+.| ....++..+.+.
T Consensus 93 ~~~~~-~~~~-~~e~~~~~W~~~~el~~~~----~~~~-~~~~~l~~l~~~ 136 (153)
T 3grn_A 93 GYVVA-DVKL-SYEHIEYSWVSLEKILGME----TLPA-YFRDFFERFDRE 136 (153)
T ss_dssp EECCC-CCCC-CTTEEEEEEECHHHHTTCS----SSCH-HHHHHHHHHHHH
T ss_pred EecCC-cEec-CCCcceEEEEEHHHhhhcc----cchH-HHHHHHHHHhcc
Confidence 65432 2222 4799999999999986631 1333 333455555554
No 17
>3gwy_A Putative CTP pyrophosphohydrolase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.00A {Bacteroides fragilis} SCOP: d.113.1.0
Probab=99.54 E-value=3.9e-14 Score=120.37 Aligned_cols=104 Identities=13% Similarity=0.004 Sum_probs=72.9
Q ss_pred EEEeCCeEEEEEEecCCCCCC-CCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCcee
Q 016627 225 YVEKDGQKFLWIGKRSQVKPT-YPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYK 303 (386)
Q Consensus 225 yv~~dg~~~LwvqrRS~~K~t-~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~ 303 (386)
.+.++| ++|+.||+..+.+ +||+|. ++||+++.||++.+||+||+.||+||.... ...++.+.+.+.. .
T Consensus 12 vi~~~~--~vLL~~r~~~~~~~~~g~w~-lPgG~ve~gE~~~~aa~REl~EE~Gl~~~~---~~~~~~~~~~~~~----~ 81 (140)
T 3gwy_A 12 VIRLGE--KYLCVQRGQTKFSYTSFRYE-FPGGKVEEGESLQEALQREIMEEMDYVIEV---GEKLLTVHHTYPD----F 81 (140)
T ss_dssp EEEETT--EEEEEEC---------CCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCEEE---EEEEEEEECCCSS----C
T ss_pred EEEeCC--EEEEEEecCCCCCCCCCeEE-CCCccCCCCCCHHHHHHHHHHHhhCcEEEe---ceEEEEEEEEeCC----c
Confidence 333455 7999999887544 999995 889999999999999999999999998764 3455655443321 1
Q ss_pred eEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 304 RDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 304 ~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
...+++|.+.++.+ .++ .+|+.+++|++++|+.++
T Consensus 82 ~~~~~~f~~~~~~~-~~~--~~E~~~~~W~~~~el~~~ 116 (140)
T 3gwy_A 82 EITMHAFLCHPVGQ-RYV--LKEHIAAQWLSTREMAIL 116 (140)
T ss_dssp CEEEEEEEEEECCS-CCC--CCSSCEEEEECHHHHTTS
T ss_pred eEEEEEEEEEecCC-ccc--ccccceeEeccHHHHhhC
Confidence 34578888887644 333 478999999999997664
No 18
>2pbt_A AP4A hydrolase; nudix protein, diadenosine polyphosphate, structural genomics, NPPSFA; HET: PGE; 1.80A {Aquifex aeolicus} PDB: 2pq1_A* 3i7u_A* 3i7v_A*
Probab=99.54 E-value=7.2e-14 Score=116.79 Aligned_cols=107 Identities=21% Similarity=0.281 Sum_probs=79.7
Q ss_pred EEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCc
Q 016627 222 MNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFS 301 (386)
Q Consensus 222 lngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g 301 (386)
+.+++.++| ++++.||+. |+| .++||+++.||++.+||+||++||+|+.... ...++.+.+.+.....
T Consensus 7 ~~~vi~~~~--~vLl~~r~~------~~w-~~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~---~~~~~~~~~~~~~~~~ 74 (134)
T 2pbt_A 7 AGGVLFKDG--EVLLIKTPS------NVW-SFPKGNIEPGEKPEETAVREVWEETGVKGEI---LDYIGEIHYWYTLKGE 74 (134)
T ss_dssp EEEEEEETT--EEEEEECTT------SCE-ECCEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEEEETTE
T ss_pred EEEEEEECC--EEEEEEeCC------CcE-ECCccccCCCCCHHHHHHHHHHHHHCCccEE---eeeeeEEEEEeeCCCc
Confidence 344454566 899999964 899 5899999999999999999999999998764 3567777666554332
Q ss_pred eeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHH
Q 016627 302 YKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVI 342 (386)
Q Consensus 302 ~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l 342 (386)
.....+++|.+..... .+.+++ |+.+++|++++|+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~-~~~~~~-e~~~~~W~~~~el~~~~ 113 (134)
T 2pbt_A 75 RIFKTVKYYLMKYKEG-EPRPSW-EVKDAKFFPIKEAKKLL 113 (134)
T ss_dssp EEEEEEEEEEEEEEEE-CCCCCT-TSSEEEEEEHHHHHHHC
T ss_pred EEEEEEEEEEEEecCC-CcCCCc-ceeEEEEEcHHHHHhhh
Confidence 2345677788776532 223334 99999999999999764
No 19
>3e57_A Uncharacterized protein TM1382; structural genomics, nudix hydrolase, PSI-2, protein structure initiative; 1.89A {Thermotoga maritima}
Probab=99.53 E-value=8.6e-15 Score=136.36 Aligned_cols=141 Identities=13% Similarity=0.105 Sum_probs=95.0
Q ss_pred eEEEEcccccccCeeeeEEEEEEEEEeCCeEEEEEEecCCCCC--CCCCCcccccccCCCCCCC--H----HHHHHHHHH
Q 016627 202 FFSLERAAAPYFGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKP--TYPGMLDHLVAGGLPHGIA--C----GENIIKECE 273 (386)
Q Consensus 202 l~~ieRaa~~~~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~--t~PG~wD~~vaGgv~aGEs--~----~eaaiREl~ 273 (386)
...++|+.+-.-+.....++..+.. ++| ++++.||+..+. .++|+|...+||+|++||+ + .+||+||++
T Consensus 52 ~~~~~Rg~~e~d~~~~q~i~~~II~-~~g--rvLl~~R~~~~~e~~~~g~w~~gPGGhVE~GEs~~p~EtleeAa~REl~ 128 (211)
T 3e57_A 52 GFFRERDEAEYDETTKQVIPYVVIM-DGD--RVLITKRTTKQSEKRLHNLYSLGIGGHVREGDGATPREAFLKGLEREVN 128 (211)
T ss_dssp CEEEEHHHHTTCTTEEEEEEEEEEE-ETT--EEEEEEC------------CBSSEECCCBGGGCSSHHHHHHHHHHHHHH
T ss_pred CEEEEccccccCCcccceEEEEEEE-ECC--EEEEEEECCCCCcccccCCcccccceEEeCCCCCCchhhHHHHHHHHHH
Confidence 4578899988888777777776554 466 799999988763 4889999879999999999 5 999999999
Q ss_pred hHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChH
Q 016627 274 EEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCS 353 (386)
Q Consensus 274 EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~ 353 (386)
||+||.+. .+.++|.+.+.... .+ ..-+.++|.++.. +..|+ +.|+.+++|++++|+.++... |-+.+.
T Consensus 129 EEtGl~v~---~~~~ig~~~~~~~~-~~-~~~l~~~f~~~~~-~g~~~--~~E~~~~~W~~~~eL~~~~~~---le~wS~ 197 (211)
T 3e57_A 129 EEVDVSLR---ELEFLGLINSSTTE-VS-RVHLGALFLGRGK-FFSVK--EKDLFEWELIKLEELEKFSGV---MEGWSK 197 (211)
T ss_dssp HHEEEEEE---EEEEEEEEECCSSH-HH-HTEEEEEEEEEEE-EEEES--CTTTCEEEEEEHHHHHHHGGG---CCHHHH
T ss_pred HHhCCeee---ccEEEEEEeccCCC-CC-eEEEEEEEEEEeC-CceeC--CCCeEEEEEEEHHHHHHhHhh---ccchhH
Confidence 99999654 35677776652211 11 0123456777764 23343 678889999999999987543 545566
Q ss_pred HHH
Q 016627 354 LVI 356 (386)
Q Consensus 354 lVl 356 (386)
+|+
T Consensus 198 lvl 200 (211)
T 3e57_A 198 ISA 200 (211)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 20
>3oga_A Nucleoside triphosphatase NUDI; salmonella enterica subsp. enterica serovar typhimurium STR. unknown function; HET: PO4; 1.75A {Salmonella enterica subsp} PDB: 3n77_A
Probab=99.52 E-value=4.6e-14 Score=123.16 Aligned_cols=118 Identities=17% Similarity=0.208 Sum_probs=73.2
Q ss_pred eeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeE---E
Q 016627 216 KAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA---V 292 (386)
Q Consensus 216 ~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~---i 292 (386)
.+..+.+.++. .+| ++++.||+..|..+||+|+ ++||+++.||++.+||+||++||+||.+.... +..+.. +
T Consensus 26 ~~~~~~~~ii~-~~~--~vLL~~r~~~~~~~~g~w~-lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~~-~~~~~~~~~~ 100 (165)
T 3oga_A 26 RQRTIVCPLIQ-NDG--CYLLCKMADNRGVFPGQWA-LSGGGVEPGERIEEALRREIREELGEQLILSD-ITPWTFRDDI 100 (165)
T ss_dssp EEEEEEEEEEE-ETT--EEEEEEECC------CCEE-CCCEECCTTCCHHHHHHHHHHHHHCSSCCEEE-EEEEEEEEEE
T ss_pred ceEEEEEEEEe-CCC--EEEEEEecCCCCCCCCeEE-CCccccCCCCCHHHHHHHHHHHHhCCCccccc-eeeeeeecce
Confidence 44445444443 465 8999999988889999996 78999999999999999999999999876532 222111 1
Q ss_pred -EEEEecCCcee--eEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 293 -SYMDINGFSYK--RDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 293 -sy~~~~~~g~~--~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
.+.+... ... ..+.++|.+...... +.. ++|+.+++|++++|+.++
T Consensus 101 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~-~~E~~~~~W~~~~el~~~ 149 (165)
T 3oga_A 101 RIKTYADG-RQEEIYMIYLIFDCVSANRD-ICI-NDEFQDYAWVKPEELALY 149 (165)
T ss_dssp EEEEC--C-CEEEEEEEEEEEEEEESCCC-CCC-CTTEEEEEEECGGGGGGS
T ss_pred eeEecCCC-CceeEEEEEEEEEeeccCCC-ccC-CchheeeEEccHHHHhhC
Confidence 1122221 111 123456666654332 222 479999999999997653
No 21
>2yvp_A NDX2, MUTT/nudix family protein; nudix protein, ADP-ribose, FAD, hydrol structural genomics, NPPSFA; HET: RBY; 1.66A {Thermus thermophilus} PDB: 2yvn_A 2yvm_A* 2yvo_A*
Probab=99.52 E-value=2.2e-14 Score=127.48 Aligned_cols=121 Identities=17% Similarity=0.186 Sum_probs=85.7
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEec
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDIN 298 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~ 298 (386)
+|.+.++. .+| ++++.||+.. ..++|+|+ ++||+++.||++.+||+||+.||+||.... +..++.+. ..
T Consensus 43 ~v~v~i~~-~~~--~vLL~~r~~~-~~~~~~w~-~PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~---~~ 111 (182)
T 2yvp_A 43 ASFVLPVT-ERG--TALLVRQYRH-PTGKFLLE-VPAGKVDEGETPEAAARRELREEVGAEAET---LIPLPSFH---PQ 111 (182)
T ss_dssp EEEEEEBC-TTS--EEEEEEEEEG-GGTEEEEE-CCEEECCTTCCHHHHHHHHHHHHHCEECSC---EEECCCBC---SC
T ss_pred EEEEEEEc-CCC--EEEEEEeccC-CCCCcEEE-eccccCCCCcCHHHHHHHHHHHHhCCCccc---EEEEEEEe---CC
Confidence 45554442 244 7888888755 46899997 889999999999999999999999998764 34455431 11
Q ss_pred CCceeeEEEEEEEEEcCC-CCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccCh
Q 016627 299 GFSYKRDVLFCYDLKLPE-DFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNC 352 (386)
Q Consensus 299 ~~g~~~Ev~~vydl~l~~-~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~ 352 (386)
. +.....+++|.+.... ...+...++|+.++.|++++|+.+++.. +.++...
T Consensus 112 ~-~~~~~~~~~f~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~-~~~~~~~ 164 (182)
T 2yvp_A 112 P-SFTAVVFHPFLALKARVVTPPTLEEGELLESLELPLTEVYALLAK-GEIQDAS 164 (182)
T ss_dssp T-TTBCCEEEEEEECSCEECSCCCCCTTCCEEEEEEEHHHHHHHHHT-TCCCCHH
T ss_pred C-CccccEEEEEEEeccccCCCCCCCCCceEEEEEEEHHHHHHHHHc-CCcCChH
Confidence 1 2224567778776421 2223345789999999999999999997 6776433
No 22
>1rya_A GDP-mannose mannosyl hydrolase; GDP-glucose, nudix, nudix Mg-complex; HET: GDP; 1.30A {Escherichia coli} SCOP: d.113.1.5 PDB: 2gt2_A 2gt4_A* 2i8t_A* 2i8u_A*
Probab=99.51 E-value=1.9e-13 Score=117.74 Aligned_cols=104 Identities=12% Similarity=0.140 Sum_probs=77.5
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecC-Cc---eeeEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDING-FS---YKRDVLF 308 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~-~g---~~~Ev~~ 308 (386)
++++.||+.. .++|+|+ ++||+++.||++.+||+||++||+||.... ....++|.+.+.+... .+ ....+.+
T Consensus 31 ~vLl~~r~~~--~~~g~w~-~PgG~ve~gE~~~~aa~REl~EEtGl~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (160)
T 1rya_A 31 EFLLGKRTNR--PAQGYWF-VPGGRVQKDETLEAAFERLTMAELGLRLPI-TAGQFYGVWQHFYDDNFSGTDFTTHYVVL 106 (160)
T ss_dssp CEEEEEECSS--SSTTSEE-CCEEECCTTCCHHHHHHHHHHHHHSSCCCG-GGSEEEEEEEEEESSBTTBSSSCEEEEEE
T ss_pred EEEEEeccCC--CCCCEEE-CCccccCCCCCHHHHHHHHHHHHHCCCCCc-ccceEEEEEeEEEcccccCCCcCcEEEEE
Confidence 7999999853 4799996 789999999999999999999999998642 2356777776655321 01 1135577
Q ss_pred EEEEEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 309 CYDLKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 309 vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
+|.+.++.+ .+..+++|+.+++|++++|+.+.
T Consensus 107 ~f~~~~~~~-~~~~~~~e~~~~~W~~~~el~~~ 138 (160)
T 1rya_A 107 GFRFRVSEE-ELLLPDEQHDDYRWLTSDALLAS 138 (160)
T ss_dssp EEEEECCGG-GCCCCSSSEEEEEEECHHHHHHC
T ss_pred EEEEEcCcc-ccccCCCccceEEEecHHHHhhc
Confidence 788887543 23334679999999999998773
No 23
>3son_A Hypothetical nudix hydrolase; structural genomics, joint center for structural GENO JCSG, protein structure initiative, PSI-biology; HET: MSE; 1.71A {Listeria monocytogenes}
Probab=99.49 E-value=7e-13 Score=113.54 Aligned_cols=114 Identities=13% Similarity=0.160 Sum_probs=80.3
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEec
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDIN 298 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~ 298 (386)
+|.+.+|...+++.++++.||+.. |+|. ++||+++.||++.+||+||++||+||..... ...+..+ +....
T Consensus 7 ~v~vvi~~~~~~~~~vLl~~r~~~-----g~w~-~PgG~ve~gE~~~~aa~REl~EEtGl~~~~~--~~~~~~~-~~~~~ 77 (149)
T 3son_A 7 QVLVIPFIKTEANYQFGVLHRTDA-----DVWQ-FVAGGGEDEEAISETAKRESIEELNLDVDVK--MYSLDSH-ASIPN 77 (149)
T ss_dssp EEEEEEEEECSSSEEEEEEEESSS-----SCEE-CEEEECCTTCCHHHHHHHHHHHHHTCCSCCC--EEEEEEE-EEEEG
T ss_pred EEEEEEEEecCCCeEEEEEEEcCC-----CCEe-CCccccCCCCCHHHHHHHHHHHHhCCCcccc--eEEEEee-ecccc
Confidence 567777765566678999999753 9995 8999999999999999999999999987752 1111111 11110
Q ss_pred -----CCceeeEEEEEEEEEcCCC-CccCCCCCceeeEEEEcHHHHHHHHH
Q 016627 299 -----GFSYKRDVLFCYDLKLPED-FVPKNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 299 -----~~g~~~Ev~~vydl~l~~~-~~p~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
..+ .....++|.+.++.+ -.+.. ++|+.+++|++++|+.+++.
T Consensus 78 ~~~~~~~~-~~~~~~~f~~~~~~~~~~~~~-~~E~~~~~W~~~~el~~~~~ 126 (149)
T 3son_A 78 FHFSFNKP-YVVPEYCFAIDLTSCSYQVTL-SLEHSELRWVSYESAIQLLE 126 (149)
T ss_dssp GGTCSSSC-SEEEEEEEEEECTTTGGGCCC-CTTEEEEEEECHHHHHHHCC
T ss_pred eeeccCCc-eEeEEEEEEEEcCCCCCcccC-CCceeeEEEeCHHHHHHHhc
Confidence 111 124467788888632 23343 47999999999999998753
No 24
>3i9x_A MUTT/nudix family protein; structural genomics, hydrolase, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics; 2.20A {Listeria innocua}
Probab=99.49 E-value=3.7e-14 Score=127.13 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=78.5
Q ss_pred EEEEEEEEEeCC----eEEEEEEecCC-----CCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceee
Q 016627 219 GVHMNGYVEKDG----QKFLWIGKRSQ-----VKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPV 289 (386)
Q Consensus 219 gVHlngyv~~dg----~~~LwvqrRS~-----~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~ 289 (386)
+|.+.++...++ +.+|++.||+. .+..++|.|. ++||+++.||++.+||+||++||+||.... +..+
T Consensus 29 ~v~~vv~~~~~~~~~~~~~vLL~~r~~~~~~g~~~~~~g~w~-lPGG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l 104 (187)
T 3i9x_A 29 TSDMILTTVKELNGKPTLHILLIKRSLTNAEGKPNMEGGKWA-VPGGFVDENESAEQAAERELEEETSLTDIP---LIPF 104 (187)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEECCSBCTTSSBCTTTTCEE-CSEEECCTTSCHHHHHHHHHHHHHCCCSCC---CEEE
T ss_pred eEEEEEEEEcCCCCCCCCEEEEEEEccccccccCCCCCCEEE-CCceeCCCCCCHHHHHHHHHHHHHCCCCcc---eEEE
Confidence 455555554444 56999999986 5678999995 789999999999999999999999997654 3455
Q ss_pred eEEEEEEecCCceeeEEEEEEEEEcCCCC-ccCCCCCceeeEEEEcHHHHHH
Q 016627 290 GAVSYMDINGFSYKRDVLFCYDLKLPEDF-VPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 290 G~isy~~~~~~g~~~Ev~~vydl~l~~~~-~p~~~dgEVe~f~lvsleEv~~ 340 (386)
|.+.+......+. .+..+|.+.+.... ......+|+.+++|++++|+.+
T Consensus 105 ~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 154 (187)
T 3i9x_A 105 GVFDKPGRDPRGW--IISRAFYAIVPPEALEKRAAGDDAAEIGLFPMTEALE 154 (187)
T ss_dssp EEECCTTSSTTSS--EEEEEEEEECCHHHHHHHHHSTTTTTEEEEEHHHHTT
T ss_pred EEEcCCccCCCCC--EEEEEEEEEEcCcccCCcCCCCceeEEEEEeHHHccc
Confidence 5533222112221 23334444443221 1111257899999999999875
No 25
>4dyw_A MUTT/nudix family protein; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.50A {Burkholderia pseudomallei}
Probab=99.49 E-value=1.2e-13 Score=120.30 Aligned_cols=103 Identities=18% Similarity=0.161 Sum_probs=75.5
Q ss_pred eCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEE
Q 016627 228 KDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVL 307 (386)
Q Consensus 228 ~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~ 307 (386)
++| +|++.||+... ++|+|+ ++||+++.||++.+||+||++||+||.... ...++.+.+.+... . ...+.
T Consensus 38 ~~~--~vLL~~r~~~~--~~~~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~-~-~~~~~ 107 (157)
T 4dyw_A 38 RDG--RILLIKRKRAP--EAGCWG-LPGGKVDWLEPVERAVCREIEEELGIALER---ATLLCVVDHIDAAN-G-EHWVA 107 (157)
T ss_dssp ETT--EEEEEEECSSS--STTCEE-CCEEECCTTCCHHHHHHHHHHHHHSCEEES---CEEEEEEEEEETTT-T-EEEEE
T ss_pred ECC--EEEEEEecCCC--CCCEEE-CCcccCCCCCCHHHHHHHHHHHHHCccccc---CcEEEEEEeeccCC-C-cEEEE
Confidence 465 79999998543 899996 889999999999999999999999998765 34566655544322 2 23456
Q ss_pred EEEEEEcCCCCccCCCCCceeeEEEEcHHHHHH
Q 016627 308 FCYDLKLPEDFVPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 308 ~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~ 340 (386)
++|.+.+..+-.....++|+.+++|++++|+.+
T Consensus 108 ~~f~~~~~~~~~~~~~~~E~~~~~W~~~~el~~ 140 (157)
T 4dyw_A 108 PVYLAHAFSGEPRVVEPDRHEALGWFALDDLPQ 140 (157)
T ss_dssp EEEEESEEESCCCCSCTTTEEEEEEEETTSCCS
T ss_pred EEEEEEEcCCCcccCCCCcEeEEEEECHHHccc
Confidence 677776643222122357999999999998755
No 26
>1g0s_A Hypothetical 23.7 kDa protein in ICC-TOLC intergenic region; nudix fold, hydrolase; 1.90A {Escherichia coli} SCOP: d.113.1.1 PDB: 1g9q_A* 1ga7_A 1khz_A* 1viq_A
Probab=99.49 E-value=2.1e-13 Score=125.32 Aligned_cols=133 Identities=14% Similarity=0.115 Sum_probs=88.3
Q ss_pred EEEEEEEEEeCCeEEEEE--EecCCCCCC--CCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEE
Q 016627 219 GVHMNGYVEKDGQKFLWI--GKRSQVKPT--YPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSY 294 (386)
Q Consensus 219 gVHlngyv~~dg~~~Lwv--qrRS~~K~t--~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy 294 (386)
+|.+..+...++ ++++ |.|...+.. .++.|. ++||++++||++.+||+||++||||+.... +.+++.+
T Consensus 59 av~vl~~~~~~~--~vLLvrq~R~~~~~~~~~~~~we-lPgG~ve~gE~~~~aA~REl~EEtGl~~~~---~~~l~~~-- 130 (209)
T 1g0s_A 59 AAVLLPFDPVRD--EVVLIEQIRIAAYDTSETPWLLE-MVAGMIEEGESVEDVARREAIEEAGLIVKR---TKPVLSF-- 130 (209)
T ss_dssp EEEEEEEETTTT--EEEEEEEECGGGGGGSSCSEEEE-CEEEECCTTCCHHHHHHHHHHHHHCCCCCC---EEEEEEE--
T ss_pred EEEEEEEECCCC--EEEEEEeecccCCCCCCCCeEEE-eCcccCCCCcCHHHHHHHHHHHHcCcccCc---EEEeEEE--
Confidence 455555542234 5555 557655432 357775 889999999999999999999999998753 4555543
Q ss_pred EEecCCceeeEEEEEEEEEcCCC-C---ccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHHHH
Q 016627 295 MDINGFSYKRDVLFCYDLKLPED-F---VPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFLFR 362 (386)
Q Consensus 295 ~~~~~~g~~~Ev~~vydl~l~~~-~---~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfliR 362 (386)
+..+ +...+.+++|.+..... . .....++|+.++.|++++|+.+++.+ ++++....++.+-++..
T Consensus 131 -~~~~-g~~~~~~~~f~a~~~~~~~~~~~~~~~e~E~~~~~w~~~~el~~~i~~-g~i~d~~t~~al~~~~~ 199 (209)
T 1g0s_A 131 -LASP-GGTSERSSIMVGEVDATTASGIHGLADENEDIRVHVVSREQAYQWVEE-GKIDNAASVIALQWLQL 199 (209)
T ss_dssp -ESCT-TTBCCEEEEEEEECCGGGCC--------CCSCEEEEEEHHHHHHHHHT-TSSCBHHHHHHHHHHHH
T ss_pred -ecCC-CccCcEEEEEEEEEccccccCCCCCCCCCcEEEEEEEEHHHHHHHHHc-CCCCCHHHHHHHHHHHH
Confidence 2222 33356778888875321 1 11234688999999999999999998 68876555555555544
No 27
>2w4e_A MUTT/nudix family protein; ADP-ribose pyrophosphatase, hydrolase; 2.00A {Deinococcus radiodurans}
Probab=99.48 E-value=1.3e-13 Score=118.50 Aligned_cols=122 Identities=20% Similarity=0.189 Sum_probs=75.2
Q ss_pred EEEEEEEEEeCCeEEEE-EEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEe
Q 016627 219 GVHMNGYVEKDGQKFLW-IGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDI 297 (386)
Q Consensus 219 gVHlngyv~~dg~~~Lw-vqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~ 297 (386)
+|.+.++. .+| +++ +.|+.. ...+|+|. ++||++++||++.+||+||++||+||.... +..++.+ +.
T Consensus 7 ~v~vi~~~-~~~--~vLLv~~~r~--~~~~~~w~-~PgG~ve~gEt~~~aa~REl~EEtGl~~~~---~~~l~~~---~~ 74 (145)
T 2w4e_A 7 AVFILPVT-AQG--EAVLIRQFRY--PLRATITE-IVAGGVEKGEDLGAAAARELLEEVGGAASE---WVPLPGF---YP 74 (145)
T ss_dssp EEEEEEEE-TTS--EEEEEEEEET--TTTEEEEE-CEEEECCTTCCHHHHHHHHHHHHHCEECSE---EEECCCB---BS
T ss_pred EEEEEEEc-CCC--EEEEEEEEec--CCCCCEEE-eCCccCCCCCCHHHHHHHHHHHhhCCccCe---EEEEecC---cC
Confidence 45555443 355 454 433322 23567895 899999999999999999999999998754 3444432 11
Q ss_pred cCCceeeEEEEEEEEE-cCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHH
Q 016627 298 NGFSYKRDVLFCYDLK-LPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLV 355 (386)
Q Consensus 298 ~~~g~~~Ev~~vydl~-l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lV 355 (386)
.. +...+.+++|.+. +..+ .+..+++|+.+++|++++|+.+++.+ +.++....+.
T Consensus 75 ~~-~~~~~~~~~f~~~~~~~~-~~~~~~~E~~~~~w~~~~el~~~~~~-~~~~~~~~~~ 130 (145)
T 2w4e_A 75 QP-SISGVVFYPLLALGVTLG-AAQLEDTETIERVVLPLAEVYRMLEA-GEIQDGPSSL 130 (145)
T ss_dssp CT-TTCCCEEEEEEEEEEEEC---------CEEEEEEEHHHHHHHHHH-TCCCBHHHHH
T ss_pred CC-CccCceEEEEEEEecccC-CCCCCCCCeEEEEEEeHHHHHHHHHc-CCcCcHHHHH
Confidence 11 2223455666655 3222 22334789999999999999999998 6776544433
No 28
>2o1c_A DATP pyrophosphohydrolase; nudix NTP hydrolase NTP pyrophosphohydrolase MUTT dihydroneo triphosphate pyrophosphohydrolase folate biosynthesis; 1.80A {Escherichia coli} PDB: 2o5w_A
Probab=99.47 E-value=4e-13 Score=113.86 Aligned_cols=114 Identities=14% Similarity=0.168 Sum_probs=77.2
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEE---EEE
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV---SYM 295 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~i---sy~ 295 (386)
+|++.++...+| ++++.||+.. ||+|+ ++||+++.||++.+||+||++||+||...... +..++.. .|.
T Consensus 11 ~v~~~i~~~~~~--~vLl~~r~~~----~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~~-~~~~~~~~~~~~~ 82 (150)
T 2o1c_A 11 SILVVIYAQDTK--RVLMLQRRDD----PDFWQ-SVTGSVEEGETAPQAAMREVKEEVTIDVVAEQ-LTLIDCQRTVEFE 82 (150)
T ss_dssp EEEEEEEETTTC--EEEEEECSSS----TTCEE-SEEEECCTTCCHHHHHHHHHHHHHCCCHHHHT-CCEEEEEEEEEEE
T ss_pred EEEEEEEeCCCC--EEEEEEecCC----CCceE-CCccccCCCCCHHHHHHHHHHHHhCCCccccc-eeEEeeeceeeee
Confidence 455444431124 7889888764 89996 79999999999999999999999999876521 2233322 221
Q ss_pred Ee------cCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHH
Q 016627 296 DI------NGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVI 342 (386)
Q Consensus 296 ~~------~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l 342 (386)
.. .+.+......++|.+.+..+..+. .+|+.+++|++++|+.++.
T Consensus 83 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~--~~E~~~~~W~~~~el~~~~ 133 (150)
T 2o1c_A 83 IFSHLRHRYAPGVTRNTESWFCLALPHERQIV--FTEHLAYKWLDAPAAAALT 133 (150)
T ss_dssp CCGGGGGGBCTTCCEEEEEEEEEEESSCCCCC--CSSSSCEEEEEHHHHHHHC
T ss_pred eecccccccCCCCcceEEEEEEEEcCCCCCcC--hhHhhccEeecHHHHHhhh
Confidence 00 011112355778888876543333 3789999999999998863
No 29
>3r03_A Nudix hydrolase; structural genomics, PSI2, protein structure INIT NEW YORK SGX research center for structural genomics, nysgx; HET: ADP; 2.49A {Rhodospirillum rubrum} SCOP: d.113.1.0
Probab=99.47 E-value=1.9e-13 Score=115.73 Aligned_cols=99 Identities=15% Similarity=0.211 Sum_probs=75.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDL 312 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl 312 (386)
++++.||+..+ .++|+|+ ++||+++.||++.+||+||+.||+|+..... .+..++.+.+.+. .. ...+++|.+
T Consensus 21 ~vLl~~r~~~~-~~~g~w~-lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~-~~~~~~~~~~~~~---~~-~~~~~~~~~ 93 (144)
T 3r03_A 21 RVLLAQRPPGK-SLAGLWE-FPGGKLEPGETPEAALVRELAEELGVDTRAS-CLAPLAFASHSYD---TF-HLLMPLYAC 93 (144)
T ss_dssp CEEEEECCTTS-SSTTCEE-CSEEECCTTCCHHHHHHHHHHHHHCCBCCGG-GCEEEEEEEEECS---SS-EEEEEEEEE
T ss_pred EEEEEEeCCCC-CCCCcEE-CCCcEecCCCCHHHHHHHHHHHHhCceeecc-ceEEEEeeeccCC---Ce-EEEEEEEEE
Confidence 79999998775 4999996 7899999999999999999999999987763 2344444444332 11 345677888
Q ss_pred EcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 313 KLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 313 ~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
.+..+ .+. ..|+.+++|++++|+.++
T Consensus 94 ~~~~~-~~~--~~e~~~~~W~~~~el~~~ 119 (144)
T 3r03_A 94 RSWRG-RAT--AREGQTLAWVRAERLREY 119 (144)
T ss_dssp CCCBS-CCC--CCSSCEEEEECGGGGGGS
T ss_pred EecCC-ccC--CCCcceEEEEeHHHhccC
Confidence 77543 333 578999999999997664
No 30
>2pqv_A MUTT/nudix family protein; structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 1.63A {Streptococcus pneumoniae}
Probab=99.45 E-value=2.9e-13 Score=116.51 Aligned_cols=106 Identities=16% Similarity=0.201 Sum_probs=75.5
Q ss_pred EEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCce
Q 016627 223 NGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSY 302 (386)
Q Consensus 223 ngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~ 302 (386)
.+++.++| ++++.|| +|+|. ++||+++.||++.+||+||++||+|+.... ...++.+.+.+......
T Consensus 23 ~~ii~~~~--~vLl~~r-------~~~w~-lPgG~ve~gE~~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~~~ 89 (154)
T 2pqv_A 23 TALIVQNH--KLLVTKD-------KGKYY-TIGGAIQVNESTEDAVVREVKEELGVKAQA---GQLAFVVENRFEVDGVS 89 (154)
T ss_dssp EECCEETT--EEEEEEE-------TTEEE-CEEEECBTTCCHHHHHHHHHHHHHCCCEEE---EEEEEEEEEEEEETTEE
T ss_pred EEEEEECC--EEEEEec-------CCeEE-CcccCcCCCCCHHHHHHHHHHHHhCCeeee---ceEEEEEeeeecCCCCc
Confidence 33444566 7999998 78996 799999999999999999999999998764 34455555444322222
Q ss_pred eeEEEEEEEEEcCCCCcc-CCCCCceeeEEEEcHHHHHHH
Q 016627 303 KRDVLFCYDLKLPEDFVP-KNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 303 ~~Ev~~vydl~l~~~~~p-~~~dgEVe~f~lvsleEv~~~ 341 (386)
...+.++|.+.+..+... ...++|+.+++|++++|+.++
T Consensus 90 ~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 129 (154)
T 2pqv_A 90 YHNIEFHYLVDLLEDAPLTMQEDEKRQPCEWIDLDKLQNI 129 (154)
T ss_dssp EEEEEEEEEEEESSCCCSEEEETTEEEEEEEEEGGGGGGS
T ss_pred ceEEEEEEEEEecCCCCcccCCCCceeeEEEeEHHHHhhc
Confidence 234567788887543222 123578999999999998764
No 31
>3eds_A MUTT/nudix family protein; MUT/nudix protein, protein structure initiative II(PSI II), nysgxrc; 1.76A {Bacillus thuringiensis str} PDB: 3smd_A
Probab=99.45 E-value=7e-14 Score=121.11 Aligned_cols=100 Identities=17% Similarity=0.241 Sum_probs=65.1
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEE-----EEEEecCCceeeEE
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV-----SYMDINGFSYKRDV 306 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~i-----sy~~~~~~g~~~Ev 306 (386)
.+++++||+ +|+|. ++||+++.||++.+||+||++||+||.... ...++.+ .+.+..+. ....+
T Consensus 33 ~~vLL~~r~------~~~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~~~~~~-~~~~~ 101 (153)
T 3eds_A 33 GEILFQYPG------GEYWS-LPAGAIELGETPEEAVVREVWEETGLKVQV---KKQKGVFGGKEYRYTYSNGD-EVEYI 101 (153)
T ss_dssp CCEEEECC---------CBB-CSEEECCTTSCHHHHHHHHHHHHHCEEEEE---EEEEEEECSGGGEEECTTSC-EEEEE
T ss_pred CeEEEEEcC------CCcEE-CCccccCCCCCHHHHHHHHHHHHHCcccee---eeEEEEecccceeeecCCCC-eEEEE
Confidence 379999997 88995 889999999999999999999999998764 3444543 23333222 22345
Q ss_pred EEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHH
Q 016627 307 LFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 307 ~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
.++|.+.+..+ .+.++++|+.+++|++++|+.++..
T Consensus 102 ~~~f~~~~~~~-~~~~~~~E~~~~~W~~~~el~~l~~ 137 (153)
T 3eds_A 102 VVVFECEVTSG-ELRSIDGESLKLQYFSLSEKPPLAL 137 (153)
T ss_dssp EEEEEEEEEEE-CCC-------CEEEECGGGCCCBSS
T ss_pred EEEEEEEecCC-ccccCCCcEEEEEEECHHHCchhcc
Confidence 67787876432 2233468999999999999877643
No 32
>3hhj_A Mutator MUTT protein; niaid, ssgcid, decode, UW, SBRI, infectious diseases, hydrol structural genomics; 2.10A {Bartonella henselae}
Probab=99.45 E-value=4.5e-13 Score=115.99 Aligned_cols=100 Identities=17% Similarity=0.228 Sum_probs=75.0
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYD 311 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vyd 311 (386)
.++++.||+..+ .++|+|. ++||+++.||++.+||+||+.||+||..... .+..++.+.+.+. .. ...+++|.
T Consensus 41 ~~vLL~~r~~~~-~~~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~-~~~~~~~~~~~~~---~~-~~~~~~~~ 113 (158)
T 3hhj_A 41 NRVLLTQRPEGK-SLAGLWE-FPGGKVEQGETPEASLIRELEEELGVHVQAD-NLFPLTFASHGYE---TF-HLLMPLYF 113 (158)
T ss_dssp SEEEEEECCCTT-SCCCCCB-CCEEECCTTCCHHHHHHHHHHHHHCCBCCGG-GCEEEEEEEEECS---SC-EEEEEEEE
T ss_pred CEEEEEEeCCCC-CCCCEEE-CCceeecCCCCHHHHHHHHHHHHhCcEeecc-eEEEEEEEeeccC---Cc-EEEEEEEE
Confidence 389999998764 5999996 7999999999999999999999999987763 2344554444332 11 34567787
Q ss_pred EEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 312 LKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 312 l~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
+.+... .+. ..|+.+++|++++|+.++
T Consensus 114 ~~~~~~-~~~--~~e~~~~~W~~~~el~~~ 140 (158)
T 3hhj_A 114 CSHYKG-VAQ--GREGQNLKWIFINDLDKY 140 (158)
T ss_dssp ESCCBS-CCC--CTTSCEEEEEEGGGGGGS
T ss_pred EEECCC-ccC--CccccceEEEcHHHHhhC
Confidence 776433 233 578999999999997653
No 33
>2rrk_A ORF135, CTP pyrophosphohydrolase; NMR {Escherichia coli}
Probab=99.44 E-value=5.8e-13 Score=112.03 Aligned_cols=100 Identities=13% Similarity=0.172 Sum_probs=75.2
Q ss_pred eCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEE
Q 016627 228 KDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVL 307 (386)
Q Consensus 228 ~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~ 307 (386)
.+| ++++.||+..+ .++|+|+ ++||+++.||++.+||+||+.||+|+.... ...++.+.+.+. +. ...+
T Consensus 18 ~~~--~vLl~~r~~~~-~~~g~w~-lPgG~ve~gE~~~~aa~RE~~EE~Gl~~~~---~~~~~~~~~~~~---~~-~~~~ 86 (140)
T 2rrk_A 18 RDG--KILLAQRPAQS-DQAGLWE-FAGGKVEPDESQRQALVRELREELGIEATV---GEYVASHQREVS---GR-IIHL 86 (140)
T ss_dssp ETT--EEEEEECCSSC-SCCCCEE-CCEEECCTTSCHHHHHHHHHHHHSCEEEEC---CEEEEEEEEEET---TE-EEEE
T ss_pred cCC--EEEEEEcCCCC-CCCCEEE-CCceecCCCCCHHHHHHHHHHHHHCCeeec---ccEEEEEEEecC---Cc-EEEE
Confidence 466 79999998764 5899997 789999999999999999999999998754 355666655432 22 2446
Q ss_pred EEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 308 FCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 308 ~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
++|.+.+..+ .+. .+|+.++.|++++|+.++
T Consensus 87 ~~~~~~~~~~-~~~--~~e~~~~~W~~~~el~~~ 117 (140)
T 2rrk_A 87 HAWHVPDFHG-TLQ--AHEHQALVWCSPEEALQY 117 (140)
T ss_dssp EEEEESEEEE-CCC--CSSCSCEEEECHHHHTTS
T ss_pred EEEEEEeeCC-CcC--CCccceeEEeCHHHHhhC
Confidence 6777765432 222 568999999999998664
No 34
>1vcd_A NDX1; nudix protein, diadenosine polyphosphate, AP6A, thermus THER HB8, hydrolase, riken structural genomics/proteomics initia RSGI; 1.70A {Thermus thermophilus} SCOP: d.113.1.1 PDB: 1vc8_A 1vc9_A*
Probab=99.44 E-value=5.4e-13 Score=110.49 Aligned_cols=94 Identities=14% Similarity=0.164 Sum_probs=70.3
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDL 312 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl 312 (386)
++++.||+. |+|+ ++||+++.||++.+||+||+.||+|+.... ...+|.+.|... +.. ..+++|.+
T Consensus 15 ~vLl~~r~~------g~w~-~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~---~~~~~~~~~~~~---~~~-~~~~~~~~ 80 (126)
T 1vcd_A 15 EVLLLRDRM------GFWV-FPKGHPEPGESLEEAAVREVWEETGVRAEV---LLPLYPTRYVNP---KGV-EREVHWFL 80 (126)
T ss_dssp CEEEEECTT------SCEE-CCEECCCTTCCHHHHHHHHHHHHHCCEEEE---EEEEEEEEEECT---TSC-EEEEEEEE
T ss_pred EEEEEEECC------CCcc-CCcCcCCCCCCHHHHHHHHHHHhhCcEeee---ccEEeEEEEecC---Cce-EEEEEEEE
Confidence 799999864 8896 789999999999999999999999998764 356676665542 222 33455666
Q ss_pred EcCCCCccCCCCCceeeEEEEcHHHHHHHH
Q 016627 313 KLPEDFVPKNQDGEVESFQLIPVAHVANVI 342 (386)
Q Consensus 313 ~l~~~~~p~~~dgEVe~f~lvsleEv~~~l 342 (386)
....+- +. .++|+.+++|++++|+.+.+
T Consensus 81 ~~~~~~-~~-~~~e~~~~~w~~~~el~~~~ 108 (126)
T 1vcd_A 81 MRGEGA-PR-LEEGMTGAGWFSPEEARALL 108 (126)
T ss_dssp EEEESC-CC-CCTTCCEEEEECHHHHHHHB
T ss_pred EEcCCC-CC-CCcceeeeEEcCHHHHHHhh
Confidence 553322 22 35799999999999998864
No 35
>1vhz_A ADP compounds hydrolase NUDE; structural genomics; HET: APR; 2.32A {Escherichia coli} SCOP: d.113.1.1 PDB: 1vhg_A*
Probab=99.43 E-value=1.7e-13 Score=124.99 Aligned_cols=114 Identities=17% Similarity=0.067 Sum_probs=80.7
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDL 312 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl 312 (386)
++++.||... ...+|+|+ ++||+++.||++.+||+||++|||||.... +..++.+.+ .+ +...+.+++|.+
T Consensus 61 ~vLLvrq~r~-~~~~~~we-lPgG~ve~gEs~~~aA~REl~EEtGl~~~~---~~~l~~~~~---~~-~~~~~~~~~f~a 131 (198)
T 1vhz_A 61 HLILIREYAV-GTESYELG-FSKGLIDPGESVYEAANRELKEEVGFGAND---LTFLKKLSM---AP-SYFSSKMNIVVA 131 (198)
T ss_dssp EEEEEEEEET-TTTEEEEE-CEEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEC---CT-TTCCCEEEEEEE
T ss_pred EEEEEEcccC-CCCCcEEE-eCcccCCCCcCHHHHHHHHHHHHHCCCcCc---eEEEEEEeC---CC-CccCcEEEEEEE
Confidence 6777766543 45789996 789999999999999999999999998753 345554331 11 223455677777
Q ss_pred EcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHH
Q 016627 313 KLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVI 356 (386)
Q Consensus 313 ~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVl 356 (386)
.......+..+++|+.++.|++++|+.+++.+ +.++....++.
T Consensus 132 ~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~~-~~i~~~~~~~a 174 (198)
T 1vhz_A 132 QDLYPESLEGDEPEPLPQVRWPLAHMMDLLED-PDFNEARNVSA 174 (198)
T ss_dssp EEEEECCCCCCCSSCCCEEEEEGGGGGGGGGC-TTTCBHHHHHH
T ss_pred EeCCcccCCCCCCceEEEEEEEHHHHHHHHHc-CCCCCHHHHHH
Confidence 64322222334789999999999999999987 67765444333
No 36
>3fcm_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, 11180J, structural genomics; 2.20A {Clostridium perfringens atcc 13124}
Probab=99.42 E-value=8.2e-13 Score=119.44 Aligned_cols=105 Identities=16% Similarity=0.151 Sum_probs=65.7
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCC-CCccCCceeeeEEEEEEecC---Cc-e---e
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIP-RSISNRARPVGAVSYMDING---FS-Y---K 303 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~-~~~~~~l~~~G~isy~~~~~---~g-~---~ 303 (386)
.++++.||. .+|.|. ++||+++.||++.+||+||++||+||. ...... ....+.|....+ .+ + .
T Consensus 58 ~~vLL~~r~-----~~g~w~-lPgG~ve~gEs~~eaa~REl~EEtGl~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 129 (197)
T 3fcm_A 58 NKFLMIHHN-----IYNSWA-WTGGHSDNEKDQLKVAIKELKEETGVKNPTPLLD--KAFALDVLTVNGHIKRGKYVSSH 129 (197)
T ss_dssp CEEEEEEET-----TTTEEE-CEEEECTTCCBHHHHHHHHHHHHHCCSSCEESCS--SCSEEEEEEECCEEETTEEECCE
T ss_pred CEEEEEEec-----CCCCEE-CCccccCCCCCHHHHHHHHHHHHHCCCcccccCC--CceEEEEeeecCccccCcccCCc
Confidence 378888875 568995 789999999999999999999999997 433211 111222322111 01 0 0
Q ss_pred eEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHc
Q 016627 304 RDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 304 ~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
..+..+|.+..+.+..+..+++|+.+++|++++|+.+++..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 170 (197)
T 3fcm_A 130 LHLNLTYLIECSEDETLMLKEDENSGVMWIPFNEISKYCSE 170 (197)
T ss_dssp EEEEEEEEEECCTTSCCCCCC----CEEEEEGGGHHHHCCC
T ss_pred eeEEEEEEEEeCCCcccCCCcccccceEEccHHHHHhhcCC
Confidence 11224455666544333444689999999999999998765
No 37
>3exq_A Nudix family hydrolase; protein structure initiative II(PSI II), NYSGXRC, 11180K, structural genomics; 2.00A {Lactobacillus brevis atcc 367}
Probab=99.42 E-value=3.2e-13 Score=118.09 Aligned_cols=114 Identities=13% Similarity=0.179 Sum_probs=81.2
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYD 311 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vyd 311 (386)
.++++.||+ +..|+|.| .++||+++.||++.+||+||+.||+||.... ...++.+.+...... ...+.++|.
T Consensus 23 ~~vLL~~r~--~~~~~g~w-~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~--~~~~~~~~~ 94 (161)
T 3exq_A 23 QRVLVEDKV--NVPWKAGH-SFPGGHVEVGEPCATAAIREVFEETGLRLSG---VTFCGTCEWFDDDRQ--HRKLGLLYR 94 (161)
T ss_dssp CCEEEECCC--CCTTTCSB-BCCCCBCCTTSCHHHHHHHHHHHHHCCEESC---CEEEEEEEEECSSCS--SEEEEEEEE
T ss_pred CEEEEEEcc--CCCCCCCE-EccceecCCCCCHHHHHHHHHHHhhCcEecC---CcEEEEEecccCCCC--eEEEEEEEE
Confidence 479999998 45799999 6999999999999999999999999998764 456676665543222 134567787
Q ss_pred EEcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHHHH
Q 016627 312 LKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFLFR 362 (386)
Q Consensus 312 l~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfliR 362 (386)
+..... .++ ..|+.+++|++++|+.++ .+.++... ++..+..
T Consensus 95 ~~~~~~-~~~--~~e~~~~~W~~~~el~~~-----~~~~~~~~-~l~~~~~ 136 (161)
T 3exq_A 95 ASNFTG-TLK--ASAEGQLSWLPITALTRE-----NSAASLPE-FLQVFTG 136 (161)
T ss_dssp ECCEES-CCC--GGGTTTEEEECGGGCCTT-----TBCTTHHH-HHHHHTT
T ss_pred EeccCC-ccC--CCccceEEEeeHHHhhhC-----ccChHHHH-HHHHHhh
Confidence 766432 233 467889999999997654 23444443 4444444
No 38
>1mk1_A ADPR pyrophosphatase; nudix hydrolase, adprase, adenosine DI ribose, RV1700, hydrolase; HET: APR; 2.00A {Mycobacterium tuberculosis} SCOP: d.113.1.1 PDB: 1mp2_A 1mqe_A* 1mqw_A* 1mr2_A*
Probab=99.41 E-value=3.4e-13 Score=123.38 Aligned_cols=136 Identities=15% Similarity=0.139 Sum_probs=84.5
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCC-CCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEe
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLP-HGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDI 297 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~-aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~ 297 (386)
+|.+.++. .+| ++++.||... ..++|+|. ++||+++ .||++.+||+||+.||+||.... +..++.+ +.
T Consensus 45 av~v~i~~-~~~--~vLLvrr~r~-~~~~~~w~-lPgG~ve~~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~---~~ 113 (207)
T 1mk1_A 45 AVAIVAMD-DNG--NIPMVYQYRH-TYGRRLWE-LPAGLLDVAGEPPHLTAARELREEVGLQAST---WQVLVDL---DT 113 (207)
T ss_dssp EEEEEECC-TTS--EEEEEEEEET-TTTEEEEE-CCEEECCSTTCCHHHHHHHHHHHHHCEEEEE---EEEEEEE---CS
T ss_pred EEEEEEEc-CCC--EEEEEEeecC-CCCCcEEE-eCCccccCCCCCHHHHHHHHHHHHHCCcccc---cEEEEEE---Ec
Confidence 34444332 244 7888777654 36789995 8999999 99999999999999999998754 3444443 22
Q ss_pred cCCceeeEEEEEEEEEcCCC-Ccc-CCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHH--HHcCCCC
Q 016627 298 NGFSYKRDVLFCYDLKLPED-FVP-KNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFL--FRHGYIC 367 (386)
Q Consensus 298 ~~~g~~~Ev~~vydl~l~~~-~~p-~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfl--iRhG~i~ 367 (386)
.. +...+.+++|.+..... ..+ ..+++|+.++.|++++|+.+++.. +.++....+..+-++ .+.|...
T Consensus 114 ~~-~~~~~~~~~f~~~~~~~~~~~~~~~~~E~~~~~Wv~~~el~~~~~~-~~i~~~~~~~al~~~~~~~~~~~~ 185 (207)
T 1mk1_A 114 AP-GFSDESVRVYLATGLREVGRPEAHHEEADMTMGWYPIAEAARRVLR-GEIVNSIAIAGVLAVHAVTTGFAQ 185 (207)
T ss_dssp CT-TTBCCCEEEEEEEEEEECCC----------CEEEEEHHHHHHHHHT-TSCCCHHHHHHHHHHHHHHTTSCC
T ss_pred CC-CccccEEEEEEEEccccCCCCCCCCCCceEEEEEEEHHHHHHHHHc-CCcCCHHHHHHHHHHHHHhccccC
Confidence 22 22334566676664321 221 134689999999999999999997 677654444444333 3456544
No 39
>3ees_A Probable pyrophosphohydrolase; nudix, RNA pyrophosphohydrolase; 1.90A {Bdellovibrio bacteriovorus} PDB: 3eeu_A 3ef5_A* 3ffu_A*
Probab=99.41 E-value=7e-13 Score=112.96 Aligned_cols=100 Identities=18% Similarity=0.264 Sum_probs=75.0
Q ss_pred eCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEE
Q 016627 228 KDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVL 307 (386)
Q Consensus 228 ~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~ 307 (386)
.+| ++++.||+.. ..++|+|+ ++||+++.||++.+||+||+.||+|+..... ..++.+.+.+.. . ...+
T Consensus 31 ~~~--~vLl~~r~~~-~~~~g~w~-~PgG~ve~gE~~~~aa~RE~~EE~Gl~~~~~---~~~~~~~~~~~~---~-~~~~ 99 (153)
T 3ees_A 31 KDG--KILVGQRPEN-NSLAGQWE-FPGGKIENGETPEEALARELNEELGIEAEVG---ELKLACTHSYGD---V-GILI 99 (153)
T ss_dssp ETT--EEEEEECCTT-STTTTCEE-CSEEECCTTCCHHHHHHHHHHHHHSCEEECC---CEEEEEEEEETT---E-EEEE
T ss_pred ECC--EEEEEEeCCC-CCCCCeEE-CCceeeCCCCCHHHHHHHHHHHHHCCccccC---ceEEEEEEecCC---C-eEEE
Confidence 455 8999999876 46999996 7899999999999999999999999987653 355555444321 1 2335
Q ss_pred EEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 308 FCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 308 ~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
++|.+.+... .+ ..+|+.++.|++++|+.++
T Consensus 100 ~~~~~~~~~~-~~--~~~e~~~~~W~~~~el~~~ 130 (153)
T 3ees_A 100 LFYEILYWKG-EP--RAKHHMMLEWIHPEELKHR 130 (153)
T ss_dssp EEEEECEEES-CC--CCSSSSEEEEECGGGGGGS
T ss_pred EEEEEEECCC-Cc--CCCccceEEEecHHHhhhC
Confidence 7777776433 23 3578999999999997653
No 40
>3q91_A Uridine diphosphate glucose pyrophosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 2.70A {Homo sapiens}
Probab=99.41 E-value=7e-13 Score=123.61 Aligned_cols=112 Identities=13% Similarity=0.092 Sum_probs=75.6
Q ss_pred CCCcccccccCCCC-CCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEEEcCCCC-----cc
Q 016627 247 PGMLDHLVAGGLPH-GIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLKLPEDF-----VP 320 (386)
Q Consensus 247 PG~wD~~vaGgv~a-GEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl~l~~~~-----~p 320 (386)
++.|+ ++||+++. ||++.+||+||+.||+|+.... ..+..++.+. .. .+...+.+++|.+.+.... ..
T Consensus 94 ~~~we-lPgG~ve~~gEs~~eaA~REl~EEtGl~~~~-~~l~~l~~~~--~~--~g~~~~~~~~f~a~~~~~~~~~~~~~ 167 (218)
T 3q91_A 94 GVTVE-LCAGLVDQPGLSLEEVACKEAWEECGYHLAP-SDLRRVATYW--SG--VGLTGSRQTMFYTEVTDAQRSGPGGG 167 (218)
T ss_dssp CEEEE-CEEEECCSSSCCHHHHHHHHHHHHHCBCCCG-GGCEEEEEEE--EC-----CCEEEEEEEEEECGGGBCC----
T ss_pred CeEEE-CCcceeCCCCCCHHHHHHHHHHHHhCCcccc-CceEEEEEEe--cC--CCccceEEEEEEEEECCcccccCCCC
Confidence 67785 88999999 9999999999999999998743 2356666532 11 1233567788888764311 12
Q ss_pred CCCCCceeeEEEEcHHHHHHHHHcCCCcc-cChHHHHHHHHHHcCC
Q 016627 321 KNQDGEVESFQLIPVAHVANVIRRTGFFK-PNCSLVIIDFLFRHGY 365 (386)
Q Consensus 321 ~~~dgEVe~f~lvsleEv~~~l~~~~~Fk-pn~~lVllDfliRhG~ 365 (386)
..+++|+.++.|++++|+.+++.+ +++. +-..+..+.|+..+.+
T Consensus 168 ~~d~~E~~ev~wv~l~el~~~i~~-g~i~~~~~~l~al~W~~~~~~ 212 (218)
T 3q91_A 168 LVEEGELIEVVHLPLEGAQAFADD-PDIPKTLGVIFGVSWFLSQVA 212 (218)
T ss_dssp -----CCEEEEEEEGGGHHHHHHC-TTSCBBHHHHHHHHHHHHHTG
T ss_pred CCCCCcEEEEEEEEHHHHHHHHHc-CCCCccHHHHHHHHHHHhccc
Confidence 334789999999999999999998 5663 2233446677777643
No 41
>2azw_A MUTT/nudix family protein; MUTT/nudix ,enterococcus faecalis, structural genomics, PSI, structure initiative; HET: 1PE; 1.90A {Enterococcus faecalis} SCOP: d.113.1.1
Probab=99.40 E-value=1.2e-12 Score=111.20 Aligned_cols=99 Identities=15% Similarity=0.155 Sum_probs=71.6
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEE-EEEecCC-ceeeEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS-YMDINGF-SYKRDVLFCY 310 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~is-y~~~~~~-g~~~Ev~~vy 310 (386)
++++.||+ +|+|+ ++||+++.||++.+||+||+.||+||.... ...++.+. +.+.... .......++|
T Consensus 32 ~vLl~~r~------~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (148)
T 2azw_A 32 TMVLVQAP------NGAYF-LPGGEIEGTETKEEAIHREVLEELGISVEI---GCYLGEADEYFYSNHRQTAYYNPGYFY 101 (148)
T ss_dssp EEEEEECT------TSCEE-CSEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEEEEEETTTTEEEEEEEEEE
T ss_pred eEEEEEcC------CCCEe-CCCcccCCCCCHHHHHHHHHHHHhCCeeEe---eeEEEEEEEEEcCCCCCcceEEEEEEE
Confidence 89999883 38996 899999999999999999999999998754 34555553 2333221 2234567778
Q ss_pred EEEcCCCCccCCCCCceeeEEEEcHHHHHHHHH
Q 016627 311 DLKLPEDFVPKNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 311 dl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
.+....... . ..+|+.+++|++++|+.+++.
T Consensus 102 ~~~~~~~~~-~-~~~e~~~~~W~~~~el~~~~~ 132 (148)
T 2azw_A 102 VANTWRQLS-E-PLERTNTLHWVAPEEAVRLLK 132 (148)
T ss_dssp EEEEEEECS-S-CC-CCSEEEEECHHHHHHHBS
T ss_pred EEEcCcCCc-C-CCCceeeEEEeeHHHHHhhhc
Confidence 877653322 2 246899999999999988754
No 42
>1f3y_A Diadenosine 5',5'''-P1,P4-tetraphosphate hydrolase; enzyme,mixed 4-stranded beta sheet, 2-stranded antiparallel sheet; NMR {Lupinus angustifolius} SCOP: d.113.1.1 PDB: 1jkn_A*
Probab=99.40 E-value=3.9e-13 Score=115.94 Aligned_cols=121 Identities=13% Similarity=0.116 Sum_probs=77.2
Q ss_pred cCeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeE-
Q 016627 213 FGIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA- 291 (386)
Q Consensus 213 ~Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~- 291 (386)
.|..+.+|.+.++. .+| +|++.||+ .+||+|+ ++||+++.||++.+||+||++||+||....+ .....
T Consensus 10 ~~~~~~~v~~~i~~-~~~--~vLl~~r~----~~~g~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~~---~~~~~~ 78 (165)
T 1f3y_A 10 PEGYRRNVGICLMN-NDK--KIFAASRL----DIPDAWQ-MPQGGIDEGEDPRNAAIRELREETGVTSAEV---IAEVPY 78 (165)
T ss_dssp CSSCCCEEEEEEEC-TTS--CEEEEEET----TEEEEEE-CCEEECCTTCCHHHHHHHHHHHHHCCCSEEE---EEECSS
T ss_pred ccceeeeEEEEEEC-CCC--cEEEEecC----CCCCcEE-CCeeccCCCCCHHHHHHHHHHHhhCCChhhh---hccccc
Confidence 35556667665543 244 78999986 3679996 7899999999999999999999999976421 11100
Q ss_pred -EEEEEecC----------CceeeEEEEEEEEEcCCC-CccCC-----CCCceeeEEEEcHHHHHHHHHc
Q 016627 292 -VSYMDING----------FSYKRDVLFCYDLKLPED-FVPKN-----QDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 292 -isy~~~~~----------~g~~~Ev~~vydl~l~~~-~~p~~-----~dgEVe~f~lvsleEv~~~l~~ 344 (386)
+.|.+... ..+.....++|.+.+... ..+.. .++|+.+++|++++|+.+++..
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 148 (165)
T 1f3y_A 79 WLTYDFPPKVREKLNIQWGSDWKGQAQKWFLFKFTGQDQEINLLGDGSEKPEFGEWSWVTPEQLIDLTVE 148 (165)
T ss_dssp CCBCCCCHHHHHHHGGGSCSSCCSCBEEEEEEEECSCGGGCCCCCCSSSCCSEEEEEEECHHHHHHHBCG
T ss_pred ceeeecCccccccccccccccccCceEEEEEEEecCCcccccccCCCCCCChhheeEEecHHHHHHHhhh
Confidence 12211100 001112344566665432 12221 2579999999999999998753
No 43
>1mut_A MUTT, nucleoside triphosphate pyrophosphohydrolase; DNA repair; NMR {Escherichia coli} SCOP: d.113.1.1 PDB: 1ppx_A* 1pun_A* 1puq_A* 1pus_A* 1tum_A* 3a6s_A* 3a6t_A* 3a6u_A* 3a6v_A*
Probab=99.38 E-value=8e-14 Score=115.53 Aligned_cols=97 Identities=15% Similarity=0.174 Sum_probs=71.8
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDL 312 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl 312 (386)
++++.||+..+ .++|+|+ ++||+++.||++.+||+||+.||+|+..... ..++.+.+.+. .. ...+++|.+
T Consensus 17 ~vLl~~r~~~~-~~~g~w~-~PgG~~e~gE~~~~aa~RE~~EE~G~~~~~~---~~~~~~~~~~~---~~-~~~~~~~~~ 87 (129)
T 1mut_A 17 EIFITRRAADA-HMANKLE-FPGGKIEMGETPEQAVVRELQEEVGITPQHF---SLFEKLEYEFP---DR-HITLWFWLV 87 (129)
T ss_dssp EEEEEECSSCC-SSSCCEE-CCCCCSSSCSSTTHHHHHHHHTTTCCSSCEE---CCCCCCBCCCS---SC-EEECCCEEE
T ss_pred EEEEEEeCCCC-CCCCeEE-CCccCcCCCCCHHHHHHHHHHHHhCCccccc---eEEEEEEEecC---Cc-eEEEEEEEE
Confidence 89999998775 7999997 7999999999999999999999999987643 33444433221 11 233566777
Q ss_pred EcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 313 KLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 313 ~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
.+... .+. ++|+.+++|++++|+.++
T Consensus 88 ~~~~~-~~~--~~e~~~~~W~~~~el~~~ 113 (129)
T 1mut_A 88 ERWEG-EPW--GKEGQPGEWMSLVGLNAD 113 (129)
T ss_dssp EECSS-CCC--CCSSCCCEEEESSSCCTT
T ss_pred EccCC-ccC--CcccceeEEeCHHHcccc
Confidence 76533 233 578999999999987653
No 44
>3q93_A 7,8-dihydro-8-oxoguanine triphosphatase; structural genomics, structural genomics consortium, SGC, NU MUTT-like, hydrolase, magnesium binding; 1.80A {Homo sapiens} PDB: 1iry_A 3zr0_A* 3zr1_A
Probab=99.38 E-value=1.6e-12 Score=115.76 Aligned_cols=125 Identities=11% Similarity=0.096 Sum_probs=86.0
Q ss_pred EEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCC
Q 016627 221 HMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGF 300 (386)
Q Consensus 221 Hlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~ 300 (386)
-+.+++..+| ++++.||.. ..++|+| .++||+++.||++.+||+||++||+||.+.. +..+|.+.+.+....
T Consensus 27 ~~~~vi~~~~--~vLL~~r~~--~~~~g~W-~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~~~~~~~~ 98 (176)
T 3q93_A 27 YTLVLVLQPQ--RVLLGMKKR--GFGAGRW-NGFGGKVQEGETIEDGARRELQEESGLTVDA---LHKVGQIVFEFVGEP 98 (176)
T ss_dssp EEEEEEECSS--EEEEEEECS--STTTTSE-ECEEEECCTTSCHHHHHHHHHHHHHSCEESC---CEEEEEEEEEETTCS
T ss_pred EEEEEEEeCC--EEEEEEEcC--CCCCCeE-ECceecCCCCCCHHHHHHHHHHHHHCCccee---eEEEEEEEEEcCCCC
Confidence 3334443455 799998854 3589999 5899999999999999999999999998764 467777776554322
Q ss_pred ceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHcCCCcccChHHHHHHHHHHcC
Q 016627 301 SYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRRTGFFKPNCSLVIIDFLFRHG 364 (386)
Q Consensus 301 g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfliRhG 364 (386)
. ....++|.+..... .+. ..|..+++|++++|+.+. .+.|.. ..++..++...
T Consensus 99 ~--~~~~~~f~~~~~~~-~~~--~~e~~~~~W~~~~el~~~-----~~~~~~-~~~l~~~~~~~ 151 (176)
T 3q93_A 99 E--LMDVHVFCTDSIQG-TPV--ESDEMRPCWFQLDQIPFK-----DMWPDD-SYWFPLLLQKK 151 (176)
T ss_dssp C--EEEEEEEEESCEES-CCC--CCSSEEEEEEETTCCCGG-----GBCTTH-HHHHHHHHTTC
T ss_pred c--EEEEEEEEEECCCC-CcC--CCcceeeEEeeHHHcccc-----ccCcch-HHHHHHHHcCC
Confidence 1 23467777765322 223 456778899999997653 244544 44566666544
No 45
>2jvb_A Protein PSU1, mRNA-decapping enzyme subunit 2; DCP2, mRNA decay, cytoplasm, hydrolase, manganese, metal-binding, mRNA processing; NMR {Saccharomyces cerevisiae}
Probab=99.37 E-value=5.7e-12 Score=107.27 Aligned_cols=98 Identities=12% Similarity=0.201 Sum_probs=67.4
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYD 311 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vyd 311 (386)
.++++.||+. +|+|+ ++||+++.||++.+||+||+.||+||..... ...+.+......+ ...++|.
T Consensus 17 ~~vLl~~r~~-----~g~w~-~PgG~ve~gEs~~~aa~RE~~EEtGl~~~~~---~~~~~~~~~~~~~-----~~~~~~~ 82 (146)
T 2jvb_A 17 SKILLVQGTE-----SDSWS-FPRGKISKDENDIDCCIREVKEEIGFDLTDY---IDDNQFIERNIQG-----KNYKIFL 82 (146)
T ss_dssp SEEEEECCSS-----SSCCB-CCEECCCSSSCHHHHHHHHHHHHTSCCCSSS---SCSSCEEEEEETT-----EEEEEEE
T ss_pred CEEEEEEEcC-----CCcEE-CCcccCCCCCCHHHHHHHHHHHHHCCCchHh---cccccccccccCC-----ceEEEEE
Confidence 3899988753 68995 7999999999999999999999999987643 2222222211111 2233343
Q ss_pred EE-cCC--CCccCCCCCceeeEEEEcHHHHHHHHHc
Q 016627 312 LK-LPE--DFVPKNQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 312 l~-l~~--~~~p~~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
+. +.. ...+. .++|+.++.|++++|+.+++..
T Consensus 83 ~~~~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~ 117 (146)
T 2jvb_A 83 ISGVSEVFNFKPQ-VRNEIDKIEWFDFKKISKTMYK 117 (146)
T ss_dssp ECCCCSSSCCCCC-CSSSCCCEEEEEHHHHHTGGGC
T ss_pred EEeccccccCCcC-CcchhheeEEeEHHHHHhhhcc
Confidence 33 222 22332 2689999999999999998876
No 46
>3h95_A Nucleoside diphosphate-linked moiety X motif 6; NUDT6, nudix, hydrolase, GFG, GFG-1, FGF2AS, structural GENO structural genomics consortium, SGC; HET: FLC; 1.70A {Homo sapiens}
Probab=99.37 E-value=3.2e-12 Score=115.90 Aligned_cols=103 Identities=15% Similarity=0.147 Sum_probs=66.8
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCcee-eEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYK-RDVLFCYD 311 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~-~Ev~~vyd 311 (386)
++++.||.. .++|.|. ++||+++.||++.+||+||++||+||..... ..++. ...+..+.... ..+.+++.
T Consensus 40 ~vLL~~r~~---~~~g~w~-lPGG~ve~gEs~~~aA~REl~EEtGl~~~~~---~l~~~-~~~~~~~~~~~~~~~~~~~~ 111 (199)
T 3h95_A 40 KILVVQDRN---KLKNMWK-FPGGLSEPEEDIGDTAVREVFEETGIKSEFR---SVLSI-RQQHTNPGAFGKSDMYIICR 111 (199)
T ss_dssp EEEEEEESS---SSTTSBB-CCEEECCTTCCHHHHHHHHHHHHHCCCEEEE---EEEEE-EECC---------CEEEEEE
T ss_pred EEEEEEEcC---CCCCCEE-CCccccCCCCCHHHHHHHHHHHHhCCccccc---eEEEE-EeeecCCCCceeEEEEEEEE
Confidence 788888853 3689995 8899999999999999999999999987642 23332 11111111111 11223333
Q ss_pred EEcCCCCccCCCCCceeeEEEEcHHHHHHHHHc
Q 016627 312 LKLPEDFVPKNQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 312 l~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
+.. .+..+.++++|+.+++|++++|+.++...
T Consensus 112 ~~~-~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 143 (199)
T 3h95_A 112 LKP-YSFTINFCQEECLRCEWMDLNDLAKTENT 143 (199)
T ss_dssp EEE-SCCCCCCCTTTEEEEEEEEHHHHHHCSSB
T ss_pred EcC-CCcccCCCccceeeeEEEeHHHHhhhhhc
Confidence 222 23344445789999999999999886543
No 47
>2b06_A MUTT/nudix family protein; structural genomics, P protein structure initiative, midwest center for structural genomics, MCSG; 1.40A {Streptococcus pneumoniae} SCOP: d.113.1.1
Probab=99.36 E-value=9.7e-13 Score=113.15 Aligned_cols=97 Identities=16% Similarity=0.252 Sum_probs=68.4
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYD 311 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vyd 311 (386)
..+++++|+..+ ||| |. ++||+++.||++.+||+||+.||+|+.... ...++...+.... +. ..+.++|.
T Consensus 23 ~~vLl~~r~~~~--~~g-w~-lPgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~--~~-~~~~~~~~ 92 (155)
T 2b06_A 23 VVMQYRAPENNR--WSG-YA-FPGGHVENDEAFAESVIREIYEETGLTIQN---PQLVGIKNWPLDT--GG-RYIVICYK 92 (155)
T ss_dssp EEEEEEC-------CCE-EE-CCCCBCCTTSCHHHHHHHHHHHHHSEEEES---CEEEEEEEEECTT--SC-EEEEEEEE
T ss_pred EEEEEEECCCCC--CCC-Ee-ccceecCCCCCHHHHHHHHHHHHhCccccC---CcEEEEEeeccCC--Cc-eEEEEEEE
Confidence 459999998765 899 85 899999999999999999999999998764 3455655554321 21 34567777
Q ss_pred EEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 312 LKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 312 l~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
+..... .++ ..|+.+++|++++|+.++
T Consensus 93 ~~~~~~-~~~--~~e~~~~~W~~~~el~~~ 119 (155)
T 2b06_A 93 ATEFSG-TLQ--SSEEGEVSWVQKDQIPNL 119 (155)
T ss_dssp ECEEEE-CCC--CBTTBEEEEEEGGGGGGS
T ss_pred EEecCC-CCC--CCcceeeEEeeHHHhhhC
Confidence 765422 223 368899999999997764
No 48
>2yyh_A MUTT domain, 8-OXO-DGTPase domain; nudix family protein, structural genomics, NPPSFA, national on protein structural and functional analyses; 1.80A {Aquifex aeolicus}
Probab=99.36 E-value=2.6e-12 Score=108.74 Aligned_cols=93 Identities=17% Similarity=0.208 Sum_probs=66.4
Q ss_pred EEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEEE
Q 016627 234 LWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLK 313 (386)
Q Consensus 234 LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl~ 313 (386)
+++.||+. .|+.|. ++||+++.||++.+||+||+.||+||.... ...++.+++....+ . ...+.++|.+.
T Consensus 27 vLl~~r~~----~~~~w~-~PgG~ve~gE~~~~aa~RE~~EEtGl~~~~---~~~~~~~~~~~~~~-~-~~~~~~~f~~~ 96 (139)
T 2yyh_A 27 IVLIERKY----PPVGLA-LPGGFVEVGERVEEAAAREMREETGLEVRL---HKLMGVYSDPERDP-R-AHVVSVVWIGD 96 (139)
T ss_dssp EEEEEECS----SSCSEE-CCEEECCTTCCHHHHHHHHHHHHHCCCCEE---EEEEEEECCTTSCT-T-SCEEEEEEEEE
T ss_pred EEEEEecC----CCCcEE-CccccCCCCCCHHHHHHHHHHHHHCCCccc---ceEEEEECCCCcCC-C-ceEEEEEEEEe
Confidence 89999864 356685 899999999999999999999999998764 23444432211111 1 13456677777
Q ss_pred cCCCCccCCCCCceeeEEEEcHHHHH
Q 016627 314 LPEDFVPKNQDGEVESFQLIPVAHVA 339 (386)
Q Consensus 314 l~~~~~p~~~dgEVe~f~lvsleEv~ 339 (386)
.... +. .++|+.+++|++++|+.
T Consensus 97 ~~~~--~~-~~~e~~~~~W~~~~el~ 119 (139)
T 2yyh_A 97 AQGE--PK-AGSDAKKVKVYRLEEIP 119 (139)
T ss_dssp EESC--CC-CCTTEEEEEEECTTSCC
T ss_pred cCCc--cC-CCCCcceEEEEEHHHCC
Confidence 7433 23 25799999999999976
No 49
>3f6a_A Hydrolase, nudix family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.02A {Clostridium perfringens atcc 13124}
Probab=99.34 E-value=4.1e-12 Score=110.22 Aligned_cols=105 Identities=13% Similarity=0.094 Sum_probs=70.9
Q ss_pred EEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceee---------eE----
Q 016627 225 YVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPV---------GA---- 291 (386)
Q Consensus 225 yv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~---------G~---- 291 (386)
++.++| ++++.||+. +|.| .++||+++.||++.+||+||++||+||.......+... |.
T Consensus 12 vi~~~~--~vLL~~r~~-----~g~w-~lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (159)
T 3f6a_A 12 FIVCKD--KVLLHLHKK-----AKKM-LPLGGHIEVNELPEEACIREAKEEAGLNVTLYNPIDINLKKSCDLSGEKLLIN 83 (159)
T ss_dssp EEEETT--EEEEEECSS-----SCCE-ECEEEECCTTCCHHHHHHHHHHHHHCCCCEECCCCCHHHHHHHHHTTCEEECC
T ss_pred EEEECC--EEEEEEcCC-----CCeE-ECCccCccCCCCHHHHHHHHHHHHhCCCceecccccccccccccccccccccC
Confidence 343465 788888863 6899 69999999999999999999999999987654322100 01
Q ss_pred ----EEEEEecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 292 ----VSYMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 292 ----isy~~~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
..+.+. .. ...+.++|.+....+ .+.++++|+.+++|++++|+.++
T Consensus 84 p~~~~~~~~~-~~--~~~~~~~f~~~~~~~-~~~~~~~E~~~~~W~~~~el~~~ 133 (159)
T 3f6a_A 84 PIHTILGDVS-PN--HSHIDFVYYATTTSF-ETSPEIGESKILKWYSKEDLKNA 133 (159)
T ss_dssp CSEEEEECSS-SS--SCEEEEEEEEECSCS-CCCCCTTSCCCEEEECSSSSTTC
T ss_pred ccccccccCC-CC--ceEEEEEEEEEeCCC-CcCCCCCcccceEEeeHHHHhhC
Confidence 011111 11 124456787877543 22334689999999999997654
No 50
>3id9_A MUTT/nudix family protein; hydrolase, protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.55A {Bacillus thuringiensis str}
Probab=99.34 E-value=2.5e-12 Score=112.76 Aligned_cols=106 Identities=17% Similarity=0.249 Sum_probs=69.0
Q ss_pred EEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCc
Q 016627 222 MNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFS 301 (386)
Q Consensus 222 lngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g 301 (386)
+.+.+.++| ++++.||... +|+| .++||+++.||++.+||+||++||+||.... ...++.+.+....
T Consensus 26 v~~ii~~~~--~vLL~~r~~~----~~~w-~~PgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~--- 92 (171)
T 3id9_A 26 VTGILIEDE--KVLLVKQKVA----NRDW-SLPGGRVENGETLEEAMIREMREETGLEVKI---KKLLYVCDKPDAS--- 92 (171)
T ss_dssp EEEEEEETT--EEEEEECSST----TCCE-ECCEEECCTTCCHHHHHHHHHHHHHCCCEEE---EEEEEEEEETTSS---
T ss_pred EEEEEEECC--EEEEEEEECC----CCeE-ECCCccCCCCCCHHHHHHHHHHHHHCCcccc---ceEEEEEcccCCC---
Confidence 334444566 7999998763 8999 5889999999999999999999999998754 2333433321111
Q ss_pred eeeEEEEEEEEEcCC-CCcc---CCCCCceeeEEEEcHHHHHHH
Q 016627 302 YKRDVLFCYDLKLPE-DFVP---KNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 302 ~~~Ev~~vydl~l~~-~~~p---~~~dgEVe~f~lvsleEv~~~ 341 (386)
.....+.|.+.... ...+ ..+++|+.+++|++++|+.++
T Consensus 93 -~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~ 135 (171)
T 3id9_A 93 -PSLLHITFLLERIEGEITLPSNEFDHNPIHDVQMVPINELSYY 135 (171)
T ss_dssp -SCEEEEEEEEEEC-------------CCCCCEEEEETGGGGGG
T ss_pred -CcEEEEEEEEEEcCCcccCCccCCCcCeeeeEEEEeHHHHhhC
Confidence 11233445555432 2222 123589999999999998765
No 51
>2fml_A MUTT/nudix family protein; structural genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; 2.26A {Enterococcus faecalis} SCOP: a.4.5.68 d.113.1.6
Probab=99.33 E-value=3.7e-12 Score=121.99 Aligned_cols=137 Identities=15% Similarity=0.111 Sum_probs=92.1
Q ss_pred eEEEEEEEEEeCC--eEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEE
Q 016627 218 YGVHMNGYVEKDG--QKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYM 295 (386)
Q Consensus 218 ~gVHlngyv~~dg--~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~ 295 (386)
.+|++.++..+++ +.+|++.||... .++|+|. ++||+++.||++.+||+||++||+||..... .+..++.+.+.
T Consensus 40 v~v~~vv~~~~~~~~~~~VLLv~R~~~--p~~g~W~-lPGG~ve~gEs~~~AA~REl~EEtGl~v~~~-~l~~l~~~~~~ 115 (273)
T 2fml_A 40 LTVDMVLLCYNKEADQLKVLLIQRKGH--PFRNSWA-LPGGFVNRNESTEDSVLRETKEETGVVISQE-NIEQLHSFSRP 115 (273)
T ss_dssp EEEEEEEEEEETTTTEEEEEEEEECSS--SSTTCEE-CCEEECCTTSCHHHHHHHHHHHHHCCCCCGG-GEEEEEEECCT
T ss_pred eEEEEEEEEEcCCCCCcEEEEEEccCC--CCCCcEE-CCccCCCCCcCHHHHHHHHHHHHHCCCCCcC-cEEEEEEEcCC
Confidence 3567766665555 778999999764 5789996 7899999999999999999999999876542 23444433211
Q ss_pred EecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHHHc------------------CCCcccChHHHHH
Q 016627 296 DINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVIRR------------------TGFFKPNCSLVII 357 (386)
Q Consensus 296 ~~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l~~------------------~~~Fkpn~~lVll 357 (386)
..++.+ +.+.++|.+.++.+. +. .++|+.++.|++++++.+.+.. ...+..+-..++.
T Consensus 116 ~r~~~~--~~~~~~y~a~~~~~~-~~-~~~E~~~~~W~~~~e~~~~~~~~~e~~~l~~~~~~~~~~~~~~LafdH~~Il~ 191 (273)
T 2fml_A 116 DRDPRG--WVVTVSYLAFIGEEP-LI-AGDDAKEVHWFNLERHGQHITLSHEDVEITLDLKTAASLGKDTLAFDHSEIII 191 (273)
T ss_dssp TSSTTS--SEEEEEEEEECCCCC-CC-CCTTEEEEEEEEEEEETTEEEEEETTEEEEEETTTCCBCSSSCCSTTHHHHHH
T ss_pred CCCCCc--eEEEEEEEEEeCCCC-CC-CCcceeeEEEEEhhHhhhhhccccchhhhccccccccccCCCcccccHHHHHH
Confidence 111112 245567777776543 22 3578999999999987665511 1244555666666
Q ss_pred HHHHH
Q 016627 358 DFLFR 362 (386)
Q Consensus 358 DfliR 362 (386)
+++-|
T Consensus 192 ~al~r 196 (273)
T 2fml_A 192 KAFNR 196 (273)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 66654
No 52
>3gg6_A Nudix motif 18, nucleoside diphosphate-linked moiety X motif 18; NUDT18, NXR1, nucleotide hydrolase, hydrolase, structural genomics; 2.10A {Homo sapiens}
Probab=99.32 E-value=3.6e-12 Score=109.87 Aligned_cols=100 Identities=19% Similarity=0.184 Sum_probs=72.1
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYD 311 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vyd 311 (386)
.++++.||+. ..++|.|+ ++||+++.||++.+||+||++||+||.... ...++.+. .... .+.++|.
T Consensus 32 ~~vLl~~r~~--~~~~~~w~-~PgG~ve~gE~~~~aa~REl~EEtGl~~~~---~~~~~~~~----~~~~---~~~~~f~ 98 (156)
T 3gg6_A 32 DEVLLIQEAK--RECRGSWY-LPAGRMEPGETIVEALQREVKEEAGLHCEP---ETLLSVEE----RGPS---WVRFVFL 98 (156)
T ss_dssp SEEEEEECCC--TTSTTCEE-CSEEECCTTCCHHHHHHHHHHHHHCEEEEE---EEEEEEEE----SSTT---EEEEEEE
T ss_pred CEEEEEEecC--CCCCCEEE-CCeeeccCCCCHHHHHHHHHHHhhCceeEe---eeEEEEEc----CCCC---EEEEEEE
Confidence 3899999974 34899996 889999999999999999999999997754 23444322 1222 2345666
Q ss_pred EEcCC-CCccC-CCCCceeeEEEEcHHHHHHHHHc
Q 016627 312 LKLPE-DFVPK-NQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 312 l~l~~-~~~p~-~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
+.+.. ...+. ..++|+.+++|++++|+.+++..
T Consensus 99 ~~~~~~~~~~~~~~~~E~~~~~W~~~~el~~~~~~ 133 (156)
T 3gg6_A 99 ARPTGGILKTSKEADAESLQAAWYPRTSLPTPLRA 133 (156)
T ss_dssp EEEEEECCCCGGGCSSSCSEEEEEETTSCCSSBSC
T ss_pred EEeeCCeeccCCCCCcceeeeEEEcHHHCcccccc
Confidence 66532 22222 34689999999999998776654
No 53
>3gz5_A MUTT/nudix family protein; DNA binding protein, nudix domain, WHTH domain; 2.20A {Shewanella oneidensis} PDB: 3gz6_A* 3gz8_A*
Probab=99.31 E-value=4.2e-12 Score=119.43 Aligned_cols=112 Identities=16% Similarity=0.208 Sum_probs=79.9
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCC--CCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEE
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPH--GIACGENIIKECEEEAGIPRSISNRARPVGAVSYMD 296 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~a--GEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~ 296 (386)
+|-+.++..++++.++++.||+. ..++|.|. ++||+++. ||++.+||+||++|||||.... +..++.+.+..
T Consensus 24 ~v~~vi~~~~~~~~~vLLv~R~~--~~~~g~W~-lPGG~ve~~~gEs~~~AA~REl~EEtGl~~~~---~~~l~~~~~~~ 97 (240)
T 3gz5_A 24 TVDAVLFTYHDQQLKVLLVQRSN--HPFLGLWG-LPGGFIDETCDESLEQTVLRKLAEKTAVVPPY---IEQLCTVGNNS 97 (240)
T ss_dssp EEEEEEEEEETTEEEEEEEECCS--SSSTTCEE-CSEEECCTTTCSBHHHHHHHHHHHHHSSCCSE---EEEEEEEEESS
T ss_pred EEEEEEEEEeCCCcEEEEEECcC--CCCCCCEE-CCccccCCCCCcCHHHHHHHHHHHHHCCCCCc---eeeEEEeCCCc
Confidence 45555555467778999999983 46899995 89999999 9999999999999999998754 34555554433
Q ss_pred ecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHH
Q 016627 297 INGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVA 339 (386)
Q Consensus 297 ~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~ 339 (386)
.++.+ +.+..+|.+.++..-. .+.++|+.++.|++++|+.
T Consensus 98 r~~~~--~~~~~~y~a~~~~~~~-~~~~~e~~~~~W~~~~el~ 137 (240)
T 3gz5_A 98 RDARG--WSVTVCYTALMSYQAC-QIQIASVSDVKWWPLADVL 137 (240)
T ss_dssp SSTTS--CEEEEEEEEECCHHHH-HHHHTTCTTEEEEEHHHHT
T ss_pred cCCCc--eEEEEEEEEEeccccc-CCCCCcccceEEecHHHcc
Confidence 33322 2345566666653221 1125789999999999974
No 54
>3fk9_A Mutator MUTT protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.50A {Bacillus halodurans}
Probab=99.31 E-value=6.5e-12 Score=113.28 Aligned_cols=104 Identities=15% Similarity=0.088 Sum_probs=73.5
Q ss_pred EEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCcee
Q 016627 224 GYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYK 303 (386)
Q Consensus 224 gyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~ 303 (386)
+++.++| ++++.||. ++|+| .++||+++.||++.+||+||+.||+||.... ....|.+.+....+....
T Consensus 9 ~vi~~~~--~vLL~~r~-----~~g~W-~lPGG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~~~~~~~~~~~~~~~~ 77 (188)
T 3fk9_A 9 CIVVDHD--QVLLLQKP-----RRGWW-VAPGGKMEAGESILETVKREYWEETGITVKN---PELKGIFSMVIFDEGKIV 77 (188)
T ss_dssp EEEEETT--EEEEEECT-----TTCCE-ECCEEECCTTCCHHHHHHHHHHHHHSCEESS---CEEEEEEEEEEEETTEEE
T ss_pred EEEEECC--EEEEEEeC-----CCCeE-ECCeecccCCCCHHHHHHHHHHHHHCCCCCC---ceEEEEEEEEecCCCcce
Confidence 3444566 78888884 48999 5889999999999999999999999998764 456677776654443222
Q ss_pred e-EEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHH
Q 016627 304 R-DVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 304 ~-Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~ 340 (386)
. -++++|.+....+- +.+ ..|..+++|++++|+.+
T Consensus 78 ~~~~~~~f~a~~~~~~-~~~-~~e~~~~~W~~~~el~~ 113 (188)
T 3fk9_A 78 SEWMLFTFKATEHEGE-MLK-QSPEGKLEWKKKDEVLE 113 (188)
T ss_dssp EEEEEEEEEESCEESC-CCS-EETTEEEEEEEGGGGGG
T ss_pred EEEEEEEEEEECCCCC-CcC-CCCCEeEEEEEHHHhhh
Confidence 2 25677877653321 222 23446899999999754
No 55
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=99.31 E-value=2.1e-11 Score=119.03 Aligned_cols=127 Identities=15% Similarity=0.108 Sum_probs=80.5
Q ss_pred EEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCc-eeeeEEEEEEecCCceee
Q 016627 226 VEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRA-RPVGAVSYMDINGFSYKR 304 (386)
Q Consensus 226 v~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l-~~~G~isy~~~~~~g~~~ 304 (386)
+..+| ++++.||...+ ++|+|. ++||+++.||++.+||+||++||+||.......+ ...+...|.+.....-..
T Consensus 215 v~~~~--~vLL~~r~~~~--~~g~w~-lPgG~ve~gEt~~~aa~REl~EEtGl~v~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (352)
T 2qjt_B 215 VIVND--HILMVQRKAHP--GKDLWA-LPGGFLECDETIAQAIIRELFEETNINLTHEQLAIAKRCEKVFDYPDRSVRGR 289 (352)
T ss_dssp EEETT--EEEEEEESSSS--STTCEE-CSEEECCTTSCHHHHHHHHHHHHHCCSCCHHHHHHHEEEEEEECCTTSCTTSE
T ss_pred EEECC--EEEEEEEcCCC--CCCeEE-CCCCcCCCCCCHHHHHHHHHHHhhCCCcccchhcceeeeeEEecCCCCCCCcc
Confidence 33466 78999987643 589996 7999999999999999999999999987642111 122222232221110012
Q ss_pred EEEEEEEEEcCCCC-ccC-CCCCceeeEEEEcH-HHHHHHHHcCCCcccChHHHHHHHH
Q 016627 305 DVLFCYDLKLPEDF-VPK-NQDGEVESFQLIPV-AHVANVIRRTGFFKPNCSLVIIDFL 360 (386)
Q Consensus 305 Ev~~vydl~l~~~~-~p~-~~dgEVe~f~lvsl-eEv~~~l~~~~~Fkpn~~lVllDfl 360 (386)
.+.++|.+.++.+- .+. ..++|+.+++|+++ +|+.++- ..+.|+-..++-.++
T Consensus 290 ~~~~~f~~~~~~~~~~~~~~~~~E~~~~~W~~~~~el~~~~---~~~~~~~~~il~~~~ 345 (352)
T 2qjt_B 290 TISHVGLFVFDQWPSLPEINAADDAKDVKWISLGSNIKNIC---DRMLEDHYQIITILL 345 (352)
T ss_dssp EEEEEEEEEECSCSSCCCCCCCTTEEEEEEEESSHHHHHTT---TSBSTTHHHHHHHHH
T ss_pred EEEEEEEEEEeCCCCCCccCCCccceEEEEecHHHHHHhhh---hhhChhHHHHHHHHH
Confidence 34555666664332 222 23689999999999 9988752 245565555444343
No 56
>2kdv_A RNA pyrophosphohydrolase; nudix family, magnesium, manganese, zinc; NMR {Escherichia coli} PDB: 2kdw_A
Probab=99.30 E-value=7.3e-12 Score=110.32 Aligned_cols=112 Identities=14% Similarity=0.146 Sum_probs=74.8
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEE----EE
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAV----SY 294 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~i----sy 294 (386)
+|.+.++. .+| ++++.||+. +|+|+ ++||+++.||++.+||+||+.||+||.... ...++.+ .|
T Consensus 10 ~v~~~i~~-~~~--~vLl~~r~~-----~~~w~-~p~G~~e~gE~~~~aa~RE~~EE~G~~~~~---~~~~~~~~~~~~~ 77 (164)
T 2kdv_A 10 NVGIVICN-RQG--QVMWARRFG-----QHSWQ-FPQGGINPGESAEQAMYRELFEEVGLSRKD---VRILASTRNWLRY 77 (164)
T ss_dssp EEEEEEEC-TTS--EEEEEEETT-----CCCEE-CCEEECCTTCCHHHHHHHHHHHHHCCCGGG---EEEEEECSSCEEE
T ss_pred EEEEEEEc-cCC--EEEEEEEcC-----CCeEE-CCeeecCCCCCHHHHHHHHHHHHHCCCccc---eEEEEEecceeEE
Confidence 44444332 244 788888864 78995 789999999999999999999999998764 3445543 23
Q ss_pred EEecC-------CceeeEEEEEEEEEcCCC---CccCC-CCCceeeEEEEcHHHHHHHH
Q 016627 295 MDING-------FSYKRDVLFCYDLKLPED---FVPKN-QDGEVESFQLIPVAHVANVI 342 (386)
Q Consensus 295 ~~~~~-------~g~~~Ev~~vydl~l~~~---~~p~~-~dgEVe~f~lvsleEv~~~l 342 (386)
..... ........++|.+.+..+ +.+++ .++|+.+++|++++++.+.+
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~E~~~~~W~~~~e~~~~l 136 (164)
T 2kdv_A 78 KLPKRLVRWDTKPVCIGQKQKWFLLQLVSGDAEINMQTSSTPEFDGWRWVSYWYPVRQV 136 (164)
T ss_dssp ECCTTTCCTTSSSCCCEEEEEEEEEEESSCGGGCCSCSSSSCSEEEEEEEETTTGGGGS
T ss_pred ecCcceeeeccCcccccceeEEEEEEecCCccccccCCCCCchhceEEEecHHHhhhhh
Confidence 33221 011123456677776432 33332 25699999999998876543
No 57
>2fb1_A Conserved hypothetical protein; structural genomics, PSI, protein STRU initiative, midwest center for structural genomics, MCSG; 2.50A {Bacteroides thetaiotaomicron} SCOP: a.4.5.68 d.113.1.6
Probab=99.29 E-value=2.8e-12 Score=119.55 Aligned_cols=113 Identities=15% Similarity=0.123 Sum_probs=78.2
Q ss_pred EEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEec
Q 016627 219 GVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDIN 298 (386)
Q Consensus 219 gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~ 298 (386)
+|.+.++..++++.++++.||.. ..++|+|. ++||+++.||++.+||+||++|||||.... +..++.+.+...+
T Consensus 15 ~v~~vi~~~~~~~~~vLLv~r~~--~~~~g~w~-lPGG~ve~gEs~~~Aa~REl~EEtGl~~~~---~~~l~~~~~~~r~ 88 (226)
T 2fb1_A 15 GIDCIIFGFNEGEISLLLLKRNF--EPAMGEWS-LMGGFVQKDESVDDAAKRVLAELTGLENVY---MEQVGAFGAIDRD 88 (226)
T ss_dssp EEEEEEEEEETTEEEEEEEECSS--SSSTTCEE-CEEEECCTTSCHHHHHHHHHHHHHCCCSCE---EEEEEEECCTTSS
T ss_pred EEEEEEEEEeCCCCEEEEEECcC--CCCCCCEE-CCeeccCCCCCHHHHHHHHHHHHHCCCCCc---eEEEEEeCCCCcC
Confidence 45555554457777999999976 35789995 899999999999999999999999998764 2344443221112
Q ss_pred CCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHH
Q 016627 299 GFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 299 ~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~ 340 (386)
+.+ +.+..+|.+.++.+-.+ ..++|+.++.|++++|+.+
T Consensus 89 ~~~--~~v~~~y~a~~~~~~~~-~~~~e~~~~~W~~~~el~~ 127 (226)
T 2fb1_A 89 PGE--RVVSIAYYALININEYD-RELVQKHNAYWVNINELPA 127 (226)
T ss_dssp SSS--CEEEEEEEEECCTTSSC-HHHHHHTTEEEEETTSCCC
T ss_pred CCc--eEEEEEEEEEecCcccc-cCCccccceEEEEHHHhhh
Confidence 112 23445677776543222 2257899999999998753
No 58
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=99.29 E-value=1.8e-11 Score=118.66 Aligned_cols=108 Identities=16% Similarity=0.223 Sum_probs=68.6
Q ss_pred EEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeee----EEEEEEecCCc
Q 016627 226 VEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVG----AVSYMDINGFS 301 (386)
Q Consensus 226 v~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G----~isy~~~~~~g 301 (386)
+.++| ++++.||+.. .++|+|. ++||+++.||++.+||+||++||+|+..... ..+| ...|.+.....
T Consensus 210 i~~~~--~vLL~~r~~~--~~~g~w~-lPgG~ve~gE~~~~aa~REl~EEtGl~~~~~---~~~~~~~~~~~~~~~~~~~ 281 (341)
T 2qjo_A 210 VVQAG--HVLMVRRQAK--PGLGLIA-LPGGFIKQNETLVEGMLRELKEETRLKVPLP---VLRGSIVDSHVFDAPGRSL 281 (341)
T ss_dssp EEETT--EEEEEECCSS--SSTTCEE-CSEEECCTTSCHHHHHHHHHHHHHCCSSCHH---HHHHTEEEEEEECCTTSCT
T ss_pred EEeCC--EEEEEEecCC--CCCCeEE-CCCCcCCCCCCHHHHHHHHHhhhhCCccccc---cccccccceEEEeCCCCCC
Confidence 33466 7999999753 3589995 8999999999999999999999999987642 2222 11222211100
Q ss_pred eeeEEEEEEEEEcCCCCccC-CCCCceeeEEEEcHHHHHHH
Q 016627 302 YKRDVLFCYDLKLPEDFVPK-NQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 302 ~~~Ev~~vydl~l~~~~~p~-~~dgEVe~f~lvsleEv~~~ 341 (386)
-...+.++|.+.++.+-.+. ..++|+.+++|++++|+.++
T Consensus 282 ~~~~~~~~f~~~~~~~~~~~~~~~~e~~~~~W~~~~el~~~ 322 (341)
T 2qjo_A 282 RGRTITHAYFIQLPGGELPAVKGGDDAQKAWWMSLADLYAQ 322 (341)
T ss_dssp TSCEEEEEEEEECCSSSCCCCC------CEEEEEHHHHHHT
T ss_pred CCcEEEEEEEEEecCCCcCccCCCCceeeEEEeeHHHHhhh
Confidence 01234566667665433222 24689999999999999885
No 59
>2dsc_A ADP-sugar pyrophosphatase; nudix domain, ADPR, ADP-ribose pyrophosphatase, NUDT5, hydrolase; HET: APR; 2.00A {Homo sapiens} PDB: 2dsd_A* 3bm4_A* 2dsb_A 3aca_A* 3ac9_A* 3l85_A*
Probab=99.28 E-value=1.7e-11 Score=112.46 Aligned_cols=114 Identities=20% Similarity=0.234 Sum_probs=76.4
Q ss_pred EEEEEEEEEeC-CeEEEEEEe--cCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEE
Q 016627 219 GVHMNGYVEKD-GQKFLWIGK--RSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYM 295 (386)
Q Consensus 219 gVHlngyv~~d-g~~~Lwvqr--RS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~ 295 (386)
+|.+.+++.++ ++.++++.| |.+ ..++.|+ ++||+++.||++.+||+||++||+|+.... ...++.+ |
T Consensus 63 av~v~~v~~~~~~~~~vlLv~q~R~~---~~~~~we-lPgG~ve~gEs~~~aA~REl~EEtGl~~~~---~~~l~~~-~- 133 (212)
T 2dsc_A 63 GVAVIPVLQRTLHYECIVLVKQFRPP---MGGYCIE-FPAGLIDDGETPEAAALRELEEETGYKGDI---AECSPAV-C- 133 (212)
T ss_dssp EEEEEEEEECTTSCCEEEEEEEEEGG---GTEEEEE-CCEEECCTTCCHHHHHHHHHHHHHCCCCEE---EEECCCE-E-
T ss_pred EEEEEEEEeCCCCCcEEEEEEeecCC---CCCcEEE-CCccccCCCCCHHHHHHHHHHHHhCCCccc---eEEeccE-E-
Confidence 56777676442 123555544 443 3578896 789999999999999999999999998654 2333332 1
Q ss_pred EecCCceeeEEEEEEEEEcCC-CC-----ccCCCCCceeeEEEEcHHHHHHHHH
Q 016627 296 DINGFSYKRDVLFCYDLKLPE-DF-----VPKNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 296 ~~~~~g~~~Ev~~vydl~l~~-~~-----~p~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
.. .++..+.+++|.+.+.. .. .+..+++|+.++.|++++|+.+++.
T Consensus 134 -~~-~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~E~~~~~w~~~~el~~~~~ 185 (212)
T 2dsc_A 134 -MD-PGLSNCTIHIVTVTINGDDAENARPKPKPGDGEFVEVISLPKNDLLQRLD 185 (212)
T ss_dssp -SC-TTTBCCEEEEEEEEEETTSGGGSSCCCCCCTTCCCEEEEEEGGGHHHHHH
T ss_pred -cC-CCccCceEEEEEEEEeCccccccCCCCCCCCCceEEEEEEEHHHHHHHHH
Confidence 11 12334556666555421 11 2233578999999999999999987
No 60
>2fvv_A Diphosphoinositol polyphosphate phosphohydrolase 1; nudix, inositol polyphosphate metabolism, structural genomics, structural genomics consortium; HET: IHP; 1.25A {Homo sapiens} SCOP: d.113.1.1 PDB: 2q9p_A* 2duk_A 3mcf_A*
Probab=99.27 E-value=3.9e-12 Score=115.82 Aligned_cols=102 Identities=16% Similarity=0.198 Sum_probs=70.1
Q ss_pred CCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEE
Q 016627 229 DGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLF 308 (386)
Q Consensus 229 dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~ 308 (386)
+++.+|++.||+. +||+|+ ++||+++.||++.+||+||++||+||.+.. ...++.+.+ . . . ....+
T Consensus 51 ~~~~~vLLv~r~~----~~g~W~-lPgG~ve~gEt~~eaa~REl~EEtGl~~~~---~~~l~~~~~--~-~-~--~~~~~ 116 (194)
T 2fvv_A 51 ESEEEVLLVSSSR----HPDRWI-VPGGGMEPEEEPSVAAVREVCEEAGVKGTL---GRLVGIFEN--Q-E-R--KHRTY 116 (194)
T ss_dssp TTCCEEEEEECSS----CTTSEE-CSEEECCTTCCHHHHHHHHHHHHHCEEEEE---EEEEEEEEE--T-T-T--TEEEE
T ss_pred CCCCEEEEEEEeC----CCCcEE-CCCCcCCCCcCHHHHHHHHHHHHhCCcccc---ceEEEEEEc--C-C-C--ceEEE
Confidence 3345899999864 479996 889999999999999999999999998654 345555442 1 1 1 12345
Q ss_pred EEEEEcCCCCccC-CCCCceeeEEEEcHHHHHHHHHc
Q 016627 309 CYDLKLPEDFVPK-NQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 309 vydl~l~~~~~p~-~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
+|.+.++...... ...+|..+++|++++|+.+++..
T Consensus 117 ~f~~~~~~~~~~~~~~~e~~~~~~W~~~~el~~~l~~ 153 (194)
T 2fvv_A 117 VYVLIVTEVLEDWEDSVNIGRKREWFKIEDAIKVLQY 153 (194)
T ss_dssp EEEEEEEEECSSCHHHHHHCCCEEEEEHHHHHHHHTT
T ss_pred EEEEEEccccCCCCCcccccceEEEEEHHHHHHHHhc
Confidence 5655553221111 01234578999999999998865
No 61
>3cng_A Nudix hydrolase; structural genomics, APC7497, PSI-2, protei structure initiative; 2.00A {Nitrosomonas europaea atcc 19718}
Probab=99.26 E-value=1.8e-11 Score=110.02 Aligned_cols=98 Identities=19% Similarity=0.123 Sum_probs=71.5
Q ss_pred EEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeE
Q 016627 226 VEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRD 305 (386)
Q Consensus 226 v~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~E 305 (386)
+.++| +|++.||...+ .+|+|+ ++||+++.||++.+||+||++||+||.+... ...+. |.+.. . ..
T Consensus 47 i~~~~--~vLL~~r~~~~--~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~---~~~~~--~~~~~---~-~~ 112 (189)
T 3cng_A 47 PEWEN--KVLLCKRAIAP--YRGKWT-LPAGFMENNETLVQGAARETLEEANARVEIR---ELYAV--YSLPH---I-SQ 112 (189)
T ss_dssp EEETT--EEEEEEESSSS--STTCEE-CSEEECCTTCCHHHHHHHHHHHHHCCCEEEE---EEEEE--EEEGG---G-TE
T ss_pred EEeCC--EEEEEEccCCC--CCCeEE-CceeeccCCCCHHHHHHHHHHHHHCCccccc---eeEEE--EecCC---C-cE
Confidence 33466 79999997653 489995 8899999999999999999999999986542 23333 22221 1 35
Q ss_pred EEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHH
Q 016627 306 VLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVA 339 (386)
Q Consensus 306 v~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~ 339 (386)
+.++|.+..... .+.+ ++|+.+++|++++|+.
T Consensus 113 ~~~~f~~~~~~~-~~~~-~~E~~~~~W~~~~el~ 144 (189)
T 3cng_A 113 VYMLFRAKLLDL-DFFP-GIESLEVRLFGEQEIP 144 (189)
T ss_dssp EEEEEEEEECCS-CCCC-CTTEEEEEEECTTTCC
T ss_pred EEEEEEEEeCCC-ccCC-CccceeEEEECHHHcC
Confidence 567788877543 2232 6799999999999976
No 62
>1u20_A U8 snoRNA-binding protein X29; modified nudix hydrolase fold, hydrolase; 2.10A {Xenopus laevis} SCOP: d.113.1.1 PDB: 2a8t_A* 2a8q_A* 2a8p_A* 2a8r_A* 2a8s_A*
Probab=99.23 E-value=1e-11 Score=114.41 Aligned_cols=124 Identities=17% Similarity=0.148 Sum_probs=85.7
Q ss_pred eEEEEEEecCCCCCCCCCCcccccccCCCCCC-CHHHHHHHHHHhHhCCCCCccC--CceeeeEEEEEEecCCceeeEEE
Q 016627 231 QKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGI-ACGENIIKECEEEAGIPRSISN--RARPVGAVSYMDINGFSYKRDVL 307 (386)
Q Consensus 231 ~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGE-s~~eaaiREl~EEaGL~~~~~~--~l~~~G~isy~~~~~~g~~~Ev~ 307 (386)
+.+++++|| ++|+|. ++||+++.|| ++.+||+||+.||+|+...... ...+++.+.+.+. ....+
T Consensus 55 ~~~vLl~~r------~~g~w~-~PGG~ve~gE~t~~~aa~REl~EEtGl~~~~~~l~~~~~~~~~~~~~~-----~~~~~ 122 (212)
T 1u20_A 55 RRVLLMMMR------FDGRLG-FPGGFVDTRDISLEEGLKRELEEELGPALATVEVTEDDYRSSQVREHP-----QKCVT 122 (212)
T ss_dssp CEEEEEEEE------TTSCEE-CSEEEECTTTSCHHHHHHHHHHHHHCGGGGGCCCCGGGEEEEEEECTT-----SCEEE
T ss_pred CCEEEEEEe------CCCeEE-CCCcccCCCCCCHHHHHHHHHHHHHCCCccccceeeeeEEEeccccCC-----CcEEE
Confidence 348999998 589995 8899999999 9999999999999999876532 1224454433221 23557
Q ss_pred EEEEEEcCCC-Cc--------cCCCCCceeeEEEEcHHHHHHH-------HHcCCCcccChHHHHHHHHHHcCCCCC
Q 016627 308 FCYDLKLPED-FV--------PKNQDGEVESFQLIPVAHVANV-------IRRTGFFKPNCSLVIIDFLFRHGYICP 368 (386)
Q Consensus 308 ~vydl~l~~~-~~--------p~~~dgEVe~f~lvsleEv~~~-------l~~~~~Fkpn~~lVllDfliRhG~i~p 368 (386)
++|.+.+..+ .. ....++|+.++.|++++++.+. +. ..|.-.+..-++..|..+|++..
T Consensus 123 ~~f~~~~~~~~~~~~e~~~~~~~~~~~Ev~~~~wvpl~el~~~~~~~p~f~~--~~~i~~a~~~l~~~l~~~~~~~~ 197 (212)
T 1u20_A 123 HFYIKELKLEEIERIEAEAVNAKDHGLEVMGLIRVPLYTLRDRVGGLPAFLC--NNFIGNSKSQLLYALRSLKLLRE 197 (212)
T ss_dssp EEEEEECCHHHHHHHHHHHTTSTTBTTTEEEEEECCCSBCTTSSTBHHHHTT--SCBCTTHHHHHHHHHHHTTSSCH
T ss_pred EEEEEEecCCCcccccccccccccCCcceEEEEEEEHHHhhhhhcCCchhhh--hhhhHHHHHHHHHHHHhCCCCCh
Confidence 7888876431 11 1123679999999999988543 22 24555556667777777776643
No 63
>3o8s_A Nudix hydrolase, ADP-ribose pyrophosphatase; structural genomics, joint center for structural genomics, J protein structure initiative; 2.27A {Streptococcus suis}
Probab=99.23 E-value=6.1e-12 Score=115.04 Aligned_cols=115 Identities=16% Similarity=0.165 Sum_probs=77.1
Q ss_pred CeeeeEEEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEE
Q 016627 214 GIKAYGVHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVS 293 (386)
Q Consensus 214 Gi~~~gVHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~is 293 (386)
|..+..+.+.+.+.++| +|++.||+ +|.|. ++||+++.||++.+||+||++||+|+.+.. ...++.+.
T Consensus 65 ~y~~~~~~v~~vv~~~~--~vLLvrr~------~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~~~ 132 (206)
T 3o8s_A 65 GYQTPKLDTRAAIFQED--KILLVQEN------DGLWS-LPGGWCDVDQSVKDNVVKEVKEEAGLDVEA---QRVVAILD 132 (206)
T ss_dssp ---CCEEEEEEEEEETT--EEEEEECT------TSCEE-CSEEECCTTSCHHHHHHHHHHHHHCEEEEE---EEEEEEEE
T ss_pred CCCCCCccEEEEEEECC--EEEEEEec------CCeEE-CCeeccCCCCCHHHHHHHHHHHHHCCccee---eeEEEEEe
Confidence 34444566666666666 89999987 78994 899999999999999999999999997654 34445443
Q ss_pred EEEecCC-ceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHH
Q 016627 294 YMDINGF-SYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVI 342 (386)
Q Consensus 294 y~~~~~~-g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l 342 (386)
+...... .....+.++|.+.+..+ .+.+ +.|+.++.|++++|+.++.
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~E~~~~~w~~~~el~~l~ 180 (206)
T 3o8s_A 133 KHKNNPAKSAHRVTKVFILCRLLGG-EFQP-NSETVASGFFSLDDLPPLY 180 (206)
T ss_dssp HHHHCC-----CEEEEEEEEEEEEE-CCCC-CSSCSEEEEECTTSCCCBC
T ss_pred ccccCCCCCCceEEEEEEEEEecCC-eecC-CCCceEEEEEeHHHhhhcc
Confidence 2111111 11224456677776432 2333 3799999999999987653
No 64
>1x51_A A/G-specific adenine DNA glycosylase; nudix domain, DNA repair, alpha-3 isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.113.1.3
Probab=99.23 E-value=3.2e-11 Score=104.14 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=71.2
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCCHH-HHHHHHHHhHhC-CCCCccCCceeeeEEEEEEecCCceeeEEEEE
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACG-ENIIKECEEEAG-IPRSISNRARPVGAVSYMDINGFSYKRDVLFC 309 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~-eaaiREl~EEaG-L~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~v 309 (386)
.++|+.||+.. ..++|+|+ ++||+++.||++. +||+||+.||+| +.... ...++.+.+.+. .. .-.+++
T Consensus 34 ~~vLl~~R~~~-~~~~g~w~-~PgG~~e~gE~~~~~a~~REl~EE~g~l~~~~---~~~l~~~~~~~~---~~-~~~~~~ 104 (155)
T 1x51_A 34 AQILLVQRPNS-GLLAGLWE-FPSVTWEPSEQLQRKALLQELQRWAGPLPATH---LRHLGEVVHTFS---HI-KLTYQV 104 (155)
T ss_dssp EEEEEEECCCC-STTCSCEE-CCEEECCSSHHHHHHHHHHHHHHHSCCCCSTT---CEECCCBCCBCS---SC-EEEEEE
T ss_pred CEEEEEECCCC-CCCCceec-CCccccCCCCCHHHHHHHHHHHHHhCCcceee---eeecceEEEecC---Cc-cEEEEE
Confidence 48999999864 57999996 8999999999996 999999999999 76543 244454433221 11 233567
Q ss_pred EEEEcCCCCccCCCCCceeeEEEEcHHHHHHH
Q 016627 310 YDLKLPEDFVPKNQDGEVESFQLIPVAHVANV 341 (386)
Q Consensus 310 ydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~ 341 (386)
|.+.+..+ .+. ..|..++.|++++|+.++
T Consensus 105 ~~~~~~~~-~~~--~~e~~~~~W~~~~el~~~ 133 (155)
T 1x51_A 105 YGLALEGQ-TPV--TTVPPGARWLTQEEFHTA 133 (155)
T ss_dssp EEEECSSC-CCC--CCCCTTEEEEEHHHHHHS
T ss_pred EEEEEcCC-CCC--CCCCCccEEccHHHhhhc
Confidence 87877533 233 357788999999998763
No 65
>1vk6_A NADH pyrophosphatase; 1790429, structural genomics, JCSG, PS protein structure initiative, joint center for structural G hydrolase; HET: MSE; 2.20A {Escherichia coli} SCOP: d.113.1.4 d.113.1.4 g.41.14.1 PDB: 2gb5_A
Probab=99.21 E-value=2.8e-11 Score=116.28 Aligned_cols=96 Identities=16% Similarity=0.203 Sum_probs=71.9
Q ss_pred eCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEE
Q 016627 228 KDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVL 307 (386)
Q Consensus 228 ~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~ 307 (386)
.++ +|++.||+..+ +|+|+ ++||+++.|||+++||+||++||+||.+.. +.+++...+.+. ..++
T Consensus 149 ~~~--~vLL~rr~~~~---~g~w~-lPgG~vE~GEt~eeAa~REv~EEtGl~v~~---~~~~~~~~~~~~------~~~~ 213 (269)
T 1vk6_A 149 RDD--SILLAQHTRHR---NGVHT-VLAGFVEVGETLEQAVAREVMEESGIKVKN---LRYVTSQPWPFP------QSLM 213 (269)
T ss_dssp ETT--EEEEEEETTTC---SSCCB-CEEEECCTTCCHHHHHHHHHHHHHCCEEEE---EEEEEEEEEETT------EEEE
T ss_pred eCC--EEEEEEecCCC---CCcEE-CCcCcCCCCCCHHHHHHHHHHHHhCceeee---EEEEEEEecCCC------CEEE
Confidence 455 79999997653 79996 689999999999999999999999998764 456665543221 2356
Q ss_pred EEEEEEcCC-CCccCCCCCceeeEEEEcHHHHHH
Q 016627 308 FCYDLKLPE-DFVPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 308 ~vydl~l~~-~~~p~~~dgEVe~f~lvsleEv~~ 340 (386)
+.|.+++.. ++. .+++|+++++|++++|+.+
T Consensus 214 ~~f~a~~~~~~~~--~~~~E~~~~~W~~~~el~~ 245 (269)
T 1vk6_A 214 TAFMAEYDSGDIV--IDPKELLEANWYRYDDLPL 245 (269)
T ss_dssp EEEEEEEEECCCC--CCTTTEEEEEEEETTSCCS
T ss_pred EEEEEEECCCCcC--CCCcceEEEEEEEHHHhhh
Confidence 667777643 333 3467999999999999754
No 66
>3q1p_A Phosphohydrolase (MUTT/nudix family protein); asymmetric dimer, RNA exonuclease, CDP-CHO pyrophosphatase; 1.80A {Bacillus cereus} PDB: 3q4i_A
Probab=99.21 E-value=1.1e-11 Score=113.18 Aligned_cols=110 Identities=17% Similarity=0.076 Sum_probs=72.7
Q ss_pred EEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEec-
Q 016627 220 VHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDIN- 298 (386)
Q Consensus 220 VHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~- 298 (386)
+.+.+.+.++| +|++.||+ .+|.|. ++||+++.||++.+||+||++||+|+.+.. ...++...+....
T Consensus 69 ~~v~~vv~~~~--~vLLv~r~-----~~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~v~~---~~~l~~~~~~~~~~ 137 (205)
T 3q1p_A 69 VDIRAVVFQNE--KLLFVKEK-----SDGKWA-LPGGWADVGYTPTEVAAKEVFEETGYEVDH---FKLLAIFDKEKHQP 137 (205)
T ss_dssp EEEEEEEEETT--EEEEEEC--------CCEE-CSEEECCTTCCHHHHHHHHHHHHHSEEEEE---EEEEEEEEHHHHSC
T ss_pred ceEEEEEEECC--EEEEEEEc-----CCCcEE-CCcCccCCCCCHHHHHHHHHHHHHCCcccc---ceEEEEEeccccCC
Confidence 34444454566 79999886 378995 799999999999999999999999998764 3444443322111
Q ss_pred CCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHHHH
Q 016627 299 GFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVANVI 342 (386)
Q Consensus 299 ~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~~l 342 (386)
+......+.++|.+.+..+ .+.+ ++|+.+++|++++|+.++.
T Consensus 138 ~~~~~~~~~~~~~~~~~~~-~~~~-~~E~~~~~w~~~~el~~l~ 179 (205)
T 3q1p_A 138 SPSATHVYKIFIGCEIIGG-EKKT-SIETEEVEFFGENELPNLS 179 (205)
T ss_dssp CCCSSCEEEEEEEEEEEEE-CCCC-CTTSCCEEEECTTSCCCBC
T ss_pred CCCCceEEEEEEEEEecCC-ccCC-CCcceEEEEEeHHHhhhcC
Confidence 1111234456677776432 2333 3799999999999987543
No 67
>3f13_A Putative nudix hydrolase family member; structural genomics, PSI-2, protein structure initiative; 1.70A {Chromobacterium violaceum}
Probab=99.20 E-value=6e-11 Score=104.98 Aligned_cols=84 Identities=18% Similarity=0.198 Sum_probs=58.4
Q ss_pred eCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEE
Q 016627 228 KDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVL 307 (386)
Q Consensus 228 ~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~ 307 (386)
.+| ++++.||. +|.|. ++||+++.||++.+||+||++||+||.... ...++. |.+ .. ...
T Consensus 25 ~~~--~vLL~~r~------~g~w~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~---~~~l~~--~~~--~~----~~~ 84 (163)
T 3f13_A 25 MPD--GVLVTASR------GGRYN-LPGGKANRGELRSQALIREIREETGLRINS---MLYLFD--HIT--PF----NAH 84 (163)
T ss_dssp ETT--EEEEEECC---------BB-CSEEECCTTCCHHHHHHHHHHHHHCCCCCE---EEEEEE--EEC--SS----EEE
T ss_pred eCC--EEEEEEEC------CCeEE-CCceeCCCCCCHHHHHHHHHHHHHCcccce---eEEEEE--Eec--CC----eEE
Confidence 455 57777774 68895 789999999999999999999999998765 233433 222 11 445
Q ss_pred EEEEEEcCCCCccCCCCCceeeEEEEc
Q 016627 308 FCYDLKLPEDFVPKNQDGEVESFQLIP 334 (386)
Q Consensus 308 ~vydl~l~~~~~p~~~dgEVe~f~lvs 334 (386)
++|.+.++..+.+. +|+.+++|++
T Consensus 85 ~~f~~~~~~~~~~~---~E~~~~~W~~ 108 (163)
T 3f13_A 85 KVYLCIAQGQPKPQ---NEIERIALVS 108 (163)
T ss_dssp EEEEEEC-CCCCCC---TTCCEEEEES
T ss_pred EEEEEEECCcCccC---CCceEEEEEC
Confidence 66777775544433 4999999999
No 68
>3fjy_A Probable MUTT1 protein; dimer, protein structure initiative II), NYSGXRC, 11181H, structural genomics; 2.15A {Bifidobacterium adolescentis atcc 1570ORGANISM_TAXID}
Probab=99.18 E-value=4.1e-11 Score=118.52 Aligned_cols=106 Identities=15% Similarity=0.158 Sum_probs=72.1
Q ss_pred CCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCc-------
Q 016627 229 DGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFS------- 301 (386)
Q Consensus 229 dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g------- 301 (386)
+++.++++.||.. .|.|. ++||+++.||++.+||+||++||+||.... ...++.+.|.+..+..
T Consensus 35 ~~~~~vLLv~r~~-----~g~W~-lPgG~ve~gEs~~~AA~REl~EEtGl~~~~---~~~l~~~~~~~~~~g~~~~~~~~ 105 (364)
T 3fjy_A 35 LDSIEVCIVHRPK-----YDDWS-WPKGKLEQNETHRHAAVREIGEETGSPVKL---GPYLCEVEYPLSEEGKKTRHSHD 105 (364)
T ss_dssp HTTEEEEEEEETT-----TTEEE-CCEEECCTTCCHHHHHHHHHHHHHSCCEEE---EEEEEEEC---------------
T ss_pred CCceEEEEEEcCC-----CCCEE-CCcCCCCCCCCHHHHHHHHHHHHhCCeeee---ccccceEEEeccCCCcccccccc
Confidence 4566888888832 38895 899999999999999999999999998765 3456666665443211
Q ss_pred --eeeEEEEEEEEEcCCC---------Ccc--CCCCCceeeEEEEcHHHHHHHHH
Q 016627 302 --YKRDVLFCYDLKLPED---------FVP--KNQDGEVESFQLIPVAHVANVIR 343 (386)
Q Consensus 302 --~~~Ev~~vydl~l~~~---------~~p--~~~dgEVe~f~lvsleEv~~~l~ 343 (386)
.....++.|.+....+ +.| .++++|+.+++|++++|+.+++.
T Consensus 106 ~~~~~~~~~~f~~~~~~~~~~~~l~~~~~~~~~~~~~E~~~~~W~~~~e~~~~~~ 160 (364)
T 3fjy_A 106 CTADTKHTLYWMAQPISADDAEHLLDAFGPVHRADVGEINDIVWVSVREARKILS 160 (364)
T ss_dssp ------CEEEEEEEECCHHHHHTTHHHHCCCCCCCTTTCCEEEEEEHHHHHHHCS
T ss_pred cccCceEEEEEEEEecCCccccccccccCccccCCccceeeeecCcHHHHHHHhc
Confidence 0123456677766432 122 23568999999999999998764
No 69
>3qsj_A Nudix hydrolase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 1.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.18 E-value=3.8e-10 Score=106.29 Aligned_cols=131 Identities=12% Similarity=0.094 Sum_probs=85.6
Q ss_pred EEEEEEecCCCCCCCCCCcccccccCCCCCCC--------------------HHHHHHHHHHhHhCCCCCccCC------
Q 016627 232 KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIA--------------------CGENIIKECEEEAGIPRSISNR------ 285 (386)
Q Consensus 232 ~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs--------------------~~eaaiREl~EEaGL~~~~~~~------ 285 (386)
.++++.||+.++..+||+|. ++||++++||+ +.+||+||++||+||....-..
T Consensus 24 ~~vLl~~R~~~~~~~~g~~~-fPGG~vd~~d~~~~~~~~g~~~~~~~~~~~a~~~aAiRE~~EE~Gl~l~~~~~~~~~~~ 102 (232)
T 3qsj_A 24 IEVLVVRRAKTMRFLPGFVA-FPGGAADPSDAEMAKRAFGRPVCAEDDDDPALAVTALRETAEEIGWLLAVRDGEGTKMD 102 (232)
T ss_dssp EEEEEEEECTTCSSSTTCEE-CSEEECCHHHHHHHHTCBSCCBTCCSTTHHHHHHHHHHHHHHHHSCCCSEECTTCCBCC
T ss_pred eEEEEEEccCCCCCCCCcEE-CCceeEecCCCCchhhhcccccccccchhhHHHHHHHHHHHHHhCceeccccccCcccC
Confidence 79999999999888999995 89999999997 4899999999999997542110
Q ss_pred --------------------------cee-eeEEEEE--EecCCce-eeEEEEEEEEEcCCCCccCCCCCceeeEEEEcH
Q 016627 286 --------------------------ARP-VGAVSYM--DINGFSY-KRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPV 335 (386)
Q Consensus 286 --------------------------l~~-~G~isy~--~~~~~g~-~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsl 335 (386)
+.+ ...+.+. ..++.+. .+--.+.|.+.+|.........+|+.+..|+++
T Consensus 103 ~~~~~~~r~~l~~~~~~f~~~~~~~~l~~~~~~L~~~arWiTP~~~~rRfdT~FFla~lpq~~~v~~d~~E~~~~~W~~p 182 (232)
T 3qsj_A 103 TPLAPDEQADLCKGGDALSAWLSARGLAFDLGLLRRIGRFVTPPTQPVRFDTRFFLCVGQHLGEPRLHGAELDAALWTPA 182 (232)
T ss_dssp SCCCHHHHHHHTTCTTHHHHHHHTTTCEEBGGGCEEEEEEECCTTSSSEEEEEEEEEECSSCCCCCCCSSSEEEEEEEEH
T ss_pred hhhHHHHHHHHHcCchhHHHHHHHCCCccChhhceeeEEEcCCcCCceeEEEEEEEEECCCCCCCCCCCCceEEEEEEcH
Confidence 000 0011111 1122211 122234466667632111334689999999999
Q ss_pred HHHHHHHHcCCCcccChHHHHHHHHHHc
Q 016627 336 AHVANVIRRTGFFKPNCSLVIIDFLFRH 363 (386)
Q Consensus 336 eEv~~~l~~~~~Fkpn~~lVllDfliRh 363 (386)
+|+++...++..+-+--....|.-|.+.
T Consensus 183 ~eal~~~~~G~i~L~pPT~~~L~~L~~~ 210 (232)
T 3qsj_A 183 RDMLTRIQSGELPAVRPTIAVLKALVAC 210 (232)
T ss_dssp HHHHHHHHTTSSCCCHHHHHHHHHHHHC
T ss_pred HHHHHHHHcCCceechhHHHHHHHHHcC
Confidence 9999999884433343455566656554
No 70
>2a6t_A SPAC19A8.12; alpha/beta/alpha, RNA binding protein,hydrolase; 2.50A {Schizosaccharomyces pombe} SCOP: a.242.1.1 d.113.1.7 PDB: 2qkm_B*
Probab=99.17 E-value=7.6e-11 Score=113.06 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=64.1
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYDL 312 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl 312 (386)
++++.||.. .||+| .++||+++.||++.+||+||++|||||....+. ..+ .|.... ...+.+++|.+
T Consensus 115 ~vLLv~r~~----~~g~W-~lPgG~ve~gEs~~eAA~REl~EEtGl~~~~l~---~~~--~~~~~~---~~~~~~~~f~~ 181 (271)
T 2a6t_A 115 QCVLVKGWK----ASSGW-GFPKGKIDKDESDVDCAIREVYEETGFDCSSRI---NPN--EFIDMT---IRGQNVRLYII 181 (271)
T ss_dssp EEEEEEESS----TTCCC-BCSEEECCTTCCHHHHHHHHHHHHHCCCCTTTC---CTT--CEEEEE---ETTEEEEEEEE
T ss_pred EEEEEEEeC----CCCeE-ECCcccCCCCcCHHHHHHHHHHHHhCCCceeee---eee--eeccCC---cCCceEEEEEE
Confidence 788888854 37999 589999999999999999999999999887532 222 222111 11234455655
Q ss_pred EcC-CC--CccCCCCCceeeEEEEcHHHHHHHHHc
Q 016627 313 KLP-ED--FVPKNQDGEVESFQLIPVAHVANVIRR 344 (386)
Q Consensus 313 ~l~-~~--~~p~~~dgEVe~f~lvsleEv~~~l~~ 344 (386)
... .+ +.+. .++|+.+++|++++|+.++...
T Consensus 182 ~~~~~~~~~~~~-~~~E~~~~~W~~~~el~~~~~~ 215 (271)
T 2a6t_A 182 PGISLDTRFESR-TRKEISKIEWHNLMDLPTFKKN 215 (271)
T ss_dssp CCCCTTCCCC-------EEEEEEEEGGGSTTCC--
T ss_pred EEecCcccCCCC-CccceeEEEEEEHHHHHHHHhc
Confidence 542 22 2332 3689999999999999876544
No 71
>1k2e_A Nudix homolog; nudix/MUTT-like fold, mixed alpha/beta, dimer, putative NUDI hydrolase, structural genomics, unknown function; 1.80A {Pyrobaculum aerophilum} SCOP: d.113.1.1 PDB: 1jrk_A 1k26_A
Probab=99.15 E-value=6.8e-11 Score=102.48 Aligned_cols=99 Identities=17% Similarity=0.134 Sum_probs=64.2
Q ss_pred EEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeE-------------
Q 016627 225 YVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGA------------- 291 (386)
Q Consensus 225 yv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~------------- 291 (386)
++.++| ++++.||+. +|+|. ++||+++.||++.+||+||+.||+||.......+..+..
T Consensus 7 vi~~~~--~vLL~~r~~-----~g~W~-lPgG~ve~gEs~~~aa~REl~EEtGl~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (156)
T 1k2e_A 7 VLVENG--KVLLVKHKR-----LGVYI-YPGGHVEHNETPIEAVKREFEEETGIVVEPIGFTYGIIDENAVERPMPLVIL 78 (156)
T ss_dssp ECEETT--EEEEEECTT-----TCSEE-CSEEECCTTCCHHHHHHHHHHHHHSEEEEECCCCCCCBSSSEEECCCCSEEE
T ss_pred EEEECC--EEEEEEEcC-----CCcEE-CCeeecCCCCCHHHHHHHHHHHHHCCcceeccceeeecccccccccccceee
Confidence 333455 788888853 78996 889999999999999999999999998765332110100
Q ss_pred EEEEEecCCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHH
Q 016627 292 VSYMDINGFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 292 isy~~~~~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~ 340 (386)
..+. ..+......+.++|.+..+ ++|+.+++|++++|+.+
T Consensus 79 ~~~~-~~~~~~~~~~~~~f~~~~~--------~~e~~~~~W~~~~el~~ 118 (156)
T 1k2e_A 79 EEVV-KYPEETHIHFDLIYLVKRV--------GGDLKNGEWIDVREIDR 118 (156)
T ss_dssp EEEE-ECSSCEEEEEEEEEEEEEE--------EECCCSCEEEEGGGGGG
T ss_pred eeee-cCCCCceEEEEEEEEEEec--------CCcEeeeEEeCHHHHhc
Confidence 0011 1111111123344555531 36789999999999864
No 72
>2xsq_A U8 snoRNA-decapping enzyme; hydrolase, mRNA decapping, mRNA turnover, structural genomic consortium, SGC; HET: IMP; 1.72A {Homo sapiens} PDB: 3cou_A 3mgm_A
Probab=99.01 E-value=1.8e-10 Score=107.10 Aligned_cols=127 Identities=17% Similarity=0.162 Sum_probs=82.0
Q ss_pred EEEEEecCCCCCCCCCCcccccccCCCCCC-CHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCCceeeEEEEEEE
Q 016627 233 FLWIGKRSQVKPTYPGMLDHLVAGGLPHGI-ACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGFSYKRDVLFCYD 311 (386)
Q Consensus 233 ~LwvqrRS~~K~t~PG~wD~~vaGgv~aGE-s~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vyd 311 (386)
.+++++|. +|+|+ ++||+++.|| ++.+||+||++||+|+..... .+..++.+.. .... ....+.++|.
T Consensus 66 ~~ll~~r~------~g~w~-lPGG~ve~gE~t~~eaa~REl~EEtGl~~~~~-~l~~l~~~~~-~~~~--~~~~~~~~f~ 134 (217)
T 2xsq_A 66 AILMQMRF------DGRLG-FPGGFVDTQDRSLEDGLNRELREELGEAAAAF-RVERTDYRSS-HVGS--GPRVVAHFYA 134 (217)
T ss_dssp EEEEEEET------TSCEE-CSEEECCTTCSSHHHHHHHHHHHHHCGGGGGC-CCCGGGEEEE-EECS--SSSEEEEEEE
T ss_pred cEEEEEcc------CCeEE-CCceecCCCCCCHHHHHHHHHHHHHCCCCccc-eeEEEEEEee-cCCC--CCeEEEEEEE
Confidence 35666663 78996 8899999999 999999999999999987631 1222222211 1111 1135566777
Q ss_pred EEcCCCCc---------cCCCCCceeeEEEEcHHHHHHHHH---c--CCCcccChHHHHHHHHHHcCCCCCCC
Q 016627 312 LKLPEDFV---------PKNQDGEVESFQLIPVAHVANVIR---R--TGFFKPNCSLVIIDFLFRHGYICPEY 370 (386)
Q Consensus 312 l~l~~~~~---------p~~~dgEVe~f~lvsleEv~~~l~---~--~~~Fkpn~~lVllDfliRhG~i~p~~ 370 (386)
+.++.+-. ....+.|+.++.|+|++++.+.+. . ...|..+...-++..+.+.|++.+++
T Consensus 135 ~~l~~~~~~~~e~~~~~~~~~~~E~~~v~~vPl~~l~d~~~~~P~~L~~~~l~~~~~~i~~~l~~~~~~~~~~ 207 (217)
T 2xsq_A 135 KRLTLEELLAVEAGATRAKDHGLEVLGLVRVPLYTLRDGVGGLPTFLENSFIGSAREQLLEALQDLGLLQSGS 207 (217)
T ss_dssp EECCHHHHHHHHHHGGGSTTBTTTEEEEEECCCSBCTTSSTBHHHHTTSCBCTTHHHHHHHHHHHTTTTC---
T ss_pred EEeccccceecccccccccccCCceeeEEEEEHHHhhhccccCcHHHHHHHHHHHHHHHHHHHHhcCCCCHHH
Confidence 77753211 122357999999999998762211 0 12466667777888999999998876
No 73
>1q33_A Pyrophosphatase, ADP-ribose pyrophosphatase; nudix fold, hydrolase; HET: BGC; 1.81A {Homo sapiens} SCOP: d.113.1.1 PDB: 1qvj_A*
Probab=98.95 E-value=5.7e-09 Score=101.02 Aligned_cols=151 Identities=11% Similarity=-0.029 Sum_probs=88.8
Q ss_pred EEEcccccccCeeeeEEEEEEEEEe--------------CCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHH
Q 016627 204 SLERAAAPYFGIKAYGVHMNGYVEK--------------DGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENII 269 (386)
Q Consensus 204 ~ieRaa~~~~Gi~~~gVHlngyv~~--------------dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaai 269 (386)
...|+..+..|-. ..+++.+...+ ++.+++++.||.. +|+|. ++||+|+.||++.+||+
T Consensus 98 ~~gr~~l~~wgp~-~a~~~vv~~~~~~~~g~~~~~~~~g~~~l~vLl~~r~~-----~g~W~-lPGG~Ve~GEs~~eAA~ 170 (292)
T 1q33_A 98 LVGRGLLGRWGPN-HAADPIITRWKRDSSGNKIMHPVSGKHILQFVAIKRKD-----CGEWA-IPGGMVDPGEKISATLK 170 (292)
T ss_dssp EEEEETCSSSEEE-EEEEEEEEEECBCTTSCBCBCTTTCSBCEEEEEEECTT-----TCSEE-CCCEECCTTCCHHHHHH
T ss_pred ccCcccccccCcc-ccceeeeeeecccccCceeeeccCCCCceEEEEEEecC-----CCcEe-CCCcccCCCCCHHHHHH
Confidence 3567777777753 35666554431 1235799999864 38995 79999999999999999
Q ss_pred HHHHhHhCCCCCc-----------cCCceee-eEEEEEE--ecCCc--eeeEEEEEEEEEcCC-----CCccCCCCCcee
Q 016627 270 KECEEEAGIPRSI-----------SNRARPV-GAVSYMD--INGFS--YKRDVLFCYDLKLPE-----DFVPKNQDGEVE 328 (386)
Q Consensus 270 REl~EEaGL~~~~-----------~~~l~~~-G~isy~~--~~~~g--~~~Ev~~vydl~l~~-----~~~p~~~dgEVe 328 (386)
||+.|||||..+. +.++... |...|.. .++.. -..-+..+|.+..+. ...++ .++|+.
T Consensus 171 REl~EETGl~~~~~~~~~~~l~~~l~~l~~~~g~~vy~~~~~dpr~~d~~~~~~~~f~~~~~~g~~~~~~~~~-~~~E~~ 249 (292)
T 1q33_A 171 REFGEEALNSLQKTSAEKREIEEKLHKLFSQDHLVIYKGYVDDPRNTDNAWMETEAVNYHDETGEIMDNLMLE-AGDDAG 249 (292)
T ss_dssp HHHHHHHSCGGGSCSSHHHHHHHHHHHHTTTSEEEEEEEECCCTTCCSSEEEEEEEEEEEESSSTTTTTCCCC-CCTTCS
T ss_pred HHHHHHhCCccccccccchhhHHHHHHHhhcccceeecccccCCCCCcccEEEEEEEEEEeCCCccccccccC-CCCccc
Confidence 9999999997321 1111111 3333322 11111 001122334333321 12222 367999
Q ss_pred eEEEEcHHHHHHHHHcCCCcccChHHHHHHHHHHcCCCCCC
Q 016627 329 SFQLIPVAHVANVIRRTGFFKPNCSLVIIDFLFRHGYICPE 369 (386)
Q Consensus 329 ~f~lvsleEv~~~l~~~~~Fkpn~~lVllDfliRhG~i~p~ 369 (386)
+++|++++|+.+ +.++-..++-+++-+++-...+
T Consensus 250 ~~~W~~~del~~-------L~~~h~~il~~~~~~~~a~~~~ 283 (292)
T 1q33_A 250 KVKWVDINDKLK-------LYASHSQFIKLVAEKRDAHWSE 283 (292)
T ss_dssp EEEEEECCTTCC-------CSTTHHHHHHHHHHHHTCCCCS
T ss_pred eEEEEEcccCcc-------cCHhHHHHHHHHHHHhcCcccC
Confidence 999999999742 3455555566666666543333
No 74
>3fsp_A A/G-specific adenine glycosylase; protein-DNA complex, DNA glycosylase, transition state analog, DNA repair; HET: NRI; 2.20A {Geobacillus stearothermophilus} PDB: 3fsq_A* 1rrs_A* 1vrl_A* 1rrq_A* 3g0q_A*
Probab=98.95 E-value=1.2e-09 Score=108.78 Aligned_cols=104 Identities=13% Similarity=0.127 Sum_probs=75.3
Q ss_pred EEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCCceeeeEEEEEEecCC
Q 016627 221 HMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNRARPVGAVSYMDINGF 300 (386)
Q Consensus 221 Hlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~l~~~G~isy~~~~~~ 300 (386)
++.+.+..+.+.+++++||..+ ..++|+|+ ++||+++.| ++.++++||+.||+||.+... ..++.+.+.+..
T Consensus 241 ~~~~~vi~~~~g~vLL~rR~~~-g~~~GlWe-fPGG~ve~g-t~~~al~REl~EE~Gl~v~~~---~~l~~~~h~~~h-- 312 (369)
T 3fsp_A 241 PLAVAVLADDEGRVLIRKRDST-GLLANLWE-FPSCETDGA-DGKEKLEQMVGEQYGLQVELT---EPIVSFEHAFSH-- 312 (369)
T ss_dssp EEEEEEEECSSSEEEEEECCSS-STTTTCEE-CCEEECSSS-CTHHHHHHHHTTSSSCCEEEC---CCCCEEEEECSS--
T ss_pred EEEEEEEEeCCCEEEEEECCCC-CCcCCccc-CCCcccCCC-CcHHHHHHHHHHHhCCceeee---cccccEEEEcce--
Confidence 3333333333338999999864 56999996 889999999 999999999999999987653 345555554421
Q ss_pred ceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHH
Q 016627 301 SYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 301 g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~ 340 (386)
. .-.+++|.+++..+ ..|.+++.|++++|+.+
T Consensus 313 -~-~~~~~~~~~~~~~~------~~e~~~~~Wv~~~el~~ 344 (369)
T 3fsp_A 313 -L-VWQLTVFPGRLVHG------GPVEEPYRLAPEDELKA 344 (369)
T ss_dssp -E-EEEEEEEEEEECCS------SCCCTTEEEEEGGGGGG
T ss_pred -E-EEEEEEEEEEEcCC------CCCccccEEeeHHHhhh
Confidence 1 23356777777543 35788999999999765
No 75
>3kvh_A Protein syndesmos; NUDT16-like, NUDT16L1, nudix, RNA regulation, RNA structural genomics consortium, SGC, RNA degradation, RNA B protein; 1.70A {Homo sapiens}
Probab=98.34 E-value=5e-07 Score=83.14 Aligned_cols=151 Identities=16% Similarity=0.135 Sum_probs=102.1
Q ss_pred EEEEcccccccC-eeeeEEEEEEEEEeCCe--------EEEEEEecCCCCCCCCCCcccccccCCCCCC-CHHHHHHHHH
Q 016627 203 FSLERAAAPYFG-IKAYGVHMNGYVEKDGQ--------KFLWIGKRSQVKPTYPGMLDHLVAGGLPHGI-ACGENIIKEC 272 (386)
Q Consensus 203 ~~ieRaa~~~~G-i~~~gVHlngyv~~dg~--------~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGE-s~~eaaiREl 272 (386)
..++|+.+-.+| =+..+.|+..|..+++. ..|++|.| +.|+|+ ++||.|+.|| |+++++.||+
T Consensus 6 ~~i~~~eal~~~~~~~hach~mlya~~~~~lfg~~p~r~~iLmQ~R------~~G~we-FPGGkVe~gE~t~e~aL~REl 78 (214)
T 3kvh_A 6 KQISRVEAMRLGPGWSHSCHAMLYAANPGQLFGRIPMRFSVLMQMR------FDGLLG-FPGGFVDRRFWSLEDGLNRVL 78 (214)
T ss_dssp CEECHHHHTTSCTTCEEEEEEEEEEEEEEEETTTEEEEEEEEEEEE------TTSCEE-CSEEEECTTTCCHHHHHHHSC
T ss_pred cccCHHHHHhhccCccEeeEEEEEcCCccccccccchhheEEEeee------eCCEEe-CCCccCCCCCCCHHHHHHHHH
Confidence 357777777665 35568899888754332 13788888 459997 8899999999 9999999999
Q ss_pred HhHhCC-CCCccCCceeeeEEEEEEecCCceeeEEEEEEEEEcCCC-C------cc--CCCCCceeeEEEEcHHHHH---
Q 016627 273 EEEAGI-PRSISNRARPVGAVSYMDINGFSYKRDVLFCYDLKLPED-F------VP--KNQDGEVESFQLIPVAHVA--- 339 (386)
Q Consensus 273 ~EEaGL-~~~~~~~l~~~G~isy~~~~~~g~~~Ev~~vydl~l~~~-~------~p--~~~dgEVe~f~lvsleEv~--- 339 (386)
.||+|+ .+.. ..+.....+.++ ..-++++|.+++..+ + .+ +...-||-+...+|+=...
T Consensus 79 ~EElg~~~V~~---~~y~~s~~~~yp-----~~V~LHfY~crl~~Ge~~~lE~~A~~A~d~G~EvlGlvRVPlytl~D~~ 150 (214)
T 3kvh_A 79 GLGLGCLRLTE---ADYLSSHLTEGP-----HRVVAHLYARQLTLEQLHAVEISAVHSRDHGLEVLGLVRVPLYTQKDRV 150 (214)
T ss_dssp CSCC---CCCG---GGEEEEEEC---------CEEEEEEEEECCHHHHHHHHHHHHTSTTBTTTEEEEEEECCCBCTTSS
T ss_pred HHhhCCeeeee---eeeEEEEeccCC-----CEEEEEEEEEEeeCCccchhhhcccCCcccCceecceEEeeeEEeccCC
Confidence 999997 3332 334444433332 123478888887531 1 11 1224689999988865443
Q ss_pred ----HHHHcCCCcccChHHHHHHHHHHcCCCCCCC
Q 016627 340 ----NVIRRTGFFKPNCSLVIIDFLFRHGYICPEY 370 (386)
Q Consensus 340 ----~~l~~~~~Fkpn~~lVllDfliRhG~i~p~~ 370 (386)
..+. ..|.-++..-++.-|..-+++.+++
T Consensus 151 gGlP~FL~--nsFig~ar~qLl~aL~~l~ll~~~~ 183 (214)
T 3kvh_A 151 GGFPNFLS--NAFVSTAKCQLLFALKVLNMMPEEK 183 (214)
T ss_dssp TBHHHHHT--SCBCTTHHHHHHHHHHHTTSSCHHH
T ss_pred CchhHHHH--hhhHHHHHHHHHHHHHHcCCCCHHH
Confidence 3344 3788999999999999999998775
No 76
>3bho_A Cleavage and polyadenylation specificity factor subunit 5; CPSF5, RNA processing, cleavage factor, diadenosine tetraphosphate, mRNA processing; HET: B4P; 1.80A {Homo sapiens} PDB: 3bap_A 3mdg_A 3mdi_A 2cl3_A 3n9u_A 3q2s_A 3q2t_A 2j8q_A 3p5t_A 3p6y_A
Probab=97.73 E-value=0.0002 Score=66.27 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=64.5
Q ss_pred EEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHhCCCCCccCC---ceeeeEEEEEE
Q 016627 220 VHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEAGIPRSISNR---ARPVGAVSYMD 296 (386)
Q Consensus 220 VHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEaGL~~~~~~~---l~~~G~isy~~ 296 (386)
|...+.+...+..+|++-|+... .| .++||.+++||++.+|++||+.||+|+....... ...+|. +..
T Consensus 61 V~avil~~~~~~phVLLlq~~~~------~f-~LPGGkle~gE~~~eaL~REL~EELg~~~~~~~~~eIge~lg~--wwR 131 (208)
T 3bho_A 61 VEGVLIVHEHRLPHVLLLQLGTT------FF-KLPGGELNPGEDEVEGLKRLMTEILGRQDGVLQDWVIDDCIGN--WWR 131 (208)
T ss_dssp EEEEEEEEETTEEEEEEEEEETT------EE-ECSEEECCTTCCHHHHHHHHHHHHHCCCC-----CEEEEEEEE--EEE
T ss_pred EEEEEEEcCCCCcEEEEEEcCCC------cE-ECCCcccCCCCCHHHHHHHHHHHHhCCCcCCCccEEEhheEEE--Eec
Confidence 44444444456567888777432 56 5899999999999999999999999974321111 134444 221
Q ss_pred ecC---------Cce--eeEEEEEEEEEcCCC--C-ccCCCCCceeeEEEEcHHHHH
Q 016627 297 ING---------FSY--KRDVLFCYDLKLPED--F-VPKNQDGEVESFQLIPVAHVA 339 (386)
Q Consensus 297 ~~~---------~g~--~~Ev~~vydl~l~~~--~-~p~~~dgEVe~f~lvsleEv~ 339 (386)
+.- ..+ -.|+..+|.+.||+. | +|.| -+ ...+|+=|+.
T Consensus 132 p~fet~~YPYlP~Hit~pKE~~kly~V~Lp~~~~f~vPkn--~k---L~AvPLfely 183 (208)
T 3bho_A 132 PNFEPPQYPYIPAHITKPKEHKKLFLVQLQEKALFAVPKN--YK---LVAAPLFELY 183 (208)
T ss_dssp CSSSSCCBSSCCTTCCSCSEEEEEEEEECCSSEEEEEETT--CE---EEEEEHHHHT
T ss_pred CCCCCcCCCCCCcccCchhhheeeeeEecCccceEecCCC--Ce---EEeecHHhhh
Confidence 110 011 148889999999875 2 4443 23 3556665553
No 77
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=96.97 E-value=0.0015 Score=64.01 Aligned_cols=91 Identities=14% Similarity=0.164 Sum_probs=55.5
Q ss_pred EEEEEEEEeCCeEEEEEEecCCCCCCCCCCcccccccCCCCCCCHHHHHHHHHHhHh-CCCCCccCCceeeeEEEEEEec
Q 016627 220 VHMNGYVEKDGQKFLWIGKRSQVKPTYPGMLDHLVAGGLPHGIACGENIIKECEEEA-GIPRSISNRARPVGAVSYMDIN 298 (386)
Q Consensus 220 VHlngyv~~dg~~~LwvqrRS~~K~t~PG~wD~~vaGgv~aGEs~~eaaiREl~EEa-GL~~~~~~~l~~~G~isy~~~~ 298 (386)
+-+.+.+..+| +|+++ ...| | .++||.+ |++..++++||++||+ ||.++.. ...+. |....
T Consensus 184 ~~vgaii~~~g--~vLL~-------~~~G-W-~LPG~~~--~~~~~~~a~RE~~EEttGl~v~~~---~L~~v--~~~~~ 245 (321)
T 3rh7_A 184 IRLGAVLEQQG--AVFLA-------GNET-L-SLPNCTV--EGGDPARTLAAYLEQLTGLNVTIG---FLYSV--YEDKS 245 (321)
T ss_dssp EEEEEEEESSS--CEEEB-------CSSE-E-BCCEEEE--SSSCHHHHHHHHHHHHHSSCEEEE---EEEEE--EECTT
T ss_pred ceEEEEEEECC--EEEEe-------eCCC-c-cCCcccC--CCChhHHHHHHHHHHhcCCEEeec---eEEEE--EEcCC
Confidence 33555555566 67777 1247 8 5777644 5666679999999998 9998752 22232 22221
Q ss_pred CCceeeEEEEEEEEEcCCCCccCCCCCceeeEEEEcHHHHHH
Q 016627 299 GFSYKRDVLFCYDLKLPEDFVPKNQDGEVESFQLIPVAHVAN 340 (386)
Q Consensus 299 ~~g~~~Ev~~vydl~l~~~~~p~~~dgEVe~f~lvsleEv~~ 340 (386)
. ..+..+|.+++.. ++..+++|++++|+-.
T Consensus 246 -~---~~~~i~f~~~~~~--------g~~~e~~~f~~~elp~ 275 (321)
T 3rh7_A 246 -D---GRQNIVYHALASD--------GAPRQGRFLRPAELAA 275 (321)
T ss_dssp -T---CCEEEEEEEEECS--------SCCSSSEEECHHHHTT
T ss_pred -C---ceEEEEEEEEeCC--------CCeeeeEEECHHHCCC
Confidence 1 1223467777642 2236679999999654
No 78
>3hkl_A Muscle, skeletal receptor tyrosine protein kinase; MUSK, receptor tyrosine kinase, frizzled CRD, ATP-binding, D bond, glycoprotein; HET: NAG; 2.10A {Rattus norvegicus}
Probab=24.50 E-value=16 Score=33.24 Aligned_cols=40 Identities=30% Similarity=0.354 Sum_probs=0.4
Q ss_pred ccccccceecceeeeecCCceeeeeecceeeeeecccccccccc
Q 016627 28 FTNKSLITTFPVRFSFHSSAKLTTSIRSLPVATASISYRSSCTF 71 (386)
Q Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 71 (386)
=|+|.-||+||--.+++|+..+ -|+|-.+||+.|+-+-++
T Consensus 157 d~~~e~it~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~ 196 (197)
T 3hkl_A 157 DYKKENITTFPSITSSKPSVDI----PNLPASTSSFAVSPAYSM 196 (197)
T ss_dssp C-------------------------------------------
T ss_pred ccccccccccccccccCccCCC----CCCCCCcccccccccccC
Confidence 3678999999999988887765 355555555444444444
Done!