BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016631
(386 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q42290|MPPB_ARATH Probable mitochondrial-processing peptidase subunit beta
OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2
Length = 531
Score = 703 bits (1814), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 330/386 (85%), Positives = 362/386 (93%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
MIFKGT++RT R LEEEIE++GGHLNAYTSREQTTYYAKVLD +VN ALD+LADILQNS
Sbjct: 146 MIFKGTDRRTVRALEEEIEDIGGHLNAYTSREQTTYYAKVLDSNVNQALDVLADILQNSK 205
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F++ RI RERDVILREM+EVEGQT+EV+ DHLHATAFQYTPLGRTILGPAQN+K+IT+E
Sbjct: 206 FEEQRINRERDVILREMQEVEGQTDEVVLDHLHATAFQYTPLGRTILGPAQNVKSITRED 265
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
LQNYI THYTA RMVIAA+GAVKHEEVVEQVKKLFTKLS+DPTT SQLVANEPA FTGSE
Sbjct: 266 LQNYIKTHYTASRMVIAAAGAVKHEEVVEQVKKLFTKLSSDPTTTSQLVANEPASFTGSE 325
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
VR+IDDD+PLAQFAVAF GASWTDPDS+ALMVMQ MLGSWNKN GGKH+GS+L QRV I
Sbjct: 326 VRMIDDDLPLAQFAVAFEGASWTDPDSVALMVMQTMLGSWNKNVGGGKHVGSDLTQRVAI 385
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
NEIAES+MAFNTNYKDTGLFGVYAVAK DCLDDL+YAIMYE TKLAYRVS+ADVTRARNQ
Sbjct: 386 NEIAESIMAFNTNYKDTGLFGVYAVAKADCLDDLSYAIMYEVTKLAYRVSDADVTRARNQ 445
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
LKSSLLLH+DGTSP+AEDIGRQLLTYGRRIP AELFARID+VDASTVKRVAN++IYD+DI
Sbjct: 446 LKSSLLLHMDGTSPIAEDIGRQLLTYGRRIPTAELFARIDAVDASTVKRVANKYIYDKDI 505
Query: 361 AIAAMGPIQGLPDYNWFRRRTYWNRY 386
AI+A+GPIQ LPDYN FRRRTYWNRY
Sbjct: 506 AISAIGPIQDLPDYNKFRRRTYWNRY 531
>sp|Q5REK3|MPPB_PONAB Mitochondrial-processing peptidase subunit beta OS=Pongo abelii
GN=PMPCB PE=2 SV=1
Length = 489
Score = 414 bits (1063), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/385 (50%), Positives = 269/385 (69%), Gaps = 2/385 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+KR+ DLE EIENMG HLNAYTSREQT YYAK KD+ A++ILADI+QNST
Sbjct: 106 MAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNST 165
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+A I RER VILREM+EVE +EV+FD+LHATA+Q T LGRTILGP +NIK+I+++
Sbjct: 166 LGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKD 225
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L +YI THY PR+V+AA+G V H+E+++ K F + T ++ A P FTGSE
Sbjct: 226 LVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFG--DSLCTHKGEIPALPPCKFTGSE 283
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
+R+ DD +PLA A+A W PD+I LMV ++G+W+++ GG ++ S+LAQ
Sbjct: 284 IRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCH 343
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
+ S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RARN
Sbjct: 344 GNLCHSFQSFNTSYTDTGLWGLYMVCEPSTVADMLHVVQKEWMRLCTSVTESEVARARNL 403
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V ++IY+R
Sbjct: 404 LKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP 463
Query: 361 AIAAMGPIQGLPDYNWFRRRTYWNR 385
AIAA+GPI+ LPD+ W R
Sbjct: 464 AIAAVGPIEQLPDFKQICSNMCWLR 488
>sp|O75439|MPPB_HUMAN Mitochondrial-processing peptidase subunit beta OS=Homo sapiens
GN=PMPCB PE=1 SV=2
Length = 489
Score = 413 bits (1062), Expect = e-115, Method: Compositional matrix adjust.
Identities = 195/385 (50%), Positives = 269/385 (69%), Gaps = 2/385 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+KR+ DLE EIENMG HLNAYTSREQT YYAK KD+ A++ILADI+QNST
Sbjct: 106 MAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNST 165
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+A I RER VILREM+EVE +EV+FD+LHATA+Q T LGRTILGP +NIK+I+++
Sbjct: 166 LGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKD 225
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L +YI THY PR+V+AA+G V H+E+++ K F + T ++ A P FTGSE
Sbjct: 226 LVDYITTHYKGPRIVLAAAGGVSHDELLDLAKFHFG--DSLCTHKGEIPALPPCKFTGSE 283
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
+R+ DD +PLA A+A W PD+I LMV ++G+W+++ GG ++ S+LAQ
Sbjct: 284 IRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCH 343
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
+ S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RARN
Sbjct: 344 GNLCHSFQSFNTSYTDTGLWGLYMVCESSTVADMLHVVQKEWMRLCTSVTESEVARARNL 403
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A T++ V ++IY+R
Sbjct: 404 LKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAETIREVCTKYIYNRSP 463
Query: 361 AIAAMGPIQGLPDYNWFRRRTYWNR 385
AIAA+GPI+ LPD+ R W R
Sbjct: 464 AIAAVGPIKQLPDFKQIRSNMCWLR 488
>sp|Q03346|MPPB_RAT Mitochondrial-processing peptidase subunit beta OS=Rattus
norvegicus GN=Pmpcb PE=1 SV=3
Length = 489
Score = 413 bits (1062), Expect = e-114, Method: Compositional matrix adjust.
Identities = 200/387 (51%), Positives = 268/387 (69%), Gaps = 6/387 (1%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+KR+ DLE EIENMG HLNAYTSREQT YYAK KD+ A++ILADI+QNST
Sbjct: 106 MAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNST 165
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+A I RER VILREM+EVE +EV+FD+LHATA+Q T LGRTILGP +NIK+I+++
Sbjct: 166 LGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSISRKD 225
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQ--LVANEPAIFTG 178
L +YI THY PR+V+AA+G V H E++E K F D A + + A P FTG
Sbjct: 226 LVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHF----GDSLCAHKGDVPALPPCKFTG 281
Query: 179 SEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRV 238
SE+R+ DD +PLA AVA WT PD+I LMV ++G+W+++ GG ++ S+LAQ
Sbjct: 282 SEIRVRDDKMPLAHLAVAIEAVGWTHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLT 341
Query: 239 GINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAR 298
+ S +FNT+Y DTGL+G+Y V + + D+ +A+ E +L VSE++V RA+
Sbjct: 342 CHGNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHAVQKEWMRLCTAVSESEVARAK 401
Query: 299 NQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDR 358
N LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA V+ V ++IY +
Sbjct: 402 NLLKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAEMVREVCTKYIYGK 461
Query: 359 DIAIAAMGPIQGLPDYNWFRRRTYWNR 385
AIAA+GPI+ LPD+N W R
Sbjct: 462 SPAIAALGPIERLPDFNQICSNMRWTR 488
>sp|Q3SZ71|MPPB_BOVIN Mitochondrial-processing peptidase subunit beta OS=Bos taurus
GN=PMPCB PE=2 SV=1
Length = 490
Score = 413 bits (1061), Expect = e-114, Method: Compositional matrix adjust.
Identities = 194/383 (50%), Positives = 268/383 (69%), Gaps = 2/383 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+KR+ DLE EIENMG HLNAYTSREQT YYAK KD+ A++ILADI+QNST
Sbjct: 107 MAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSKDLPRAVEILADIIQNST 166
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+A I RER VILREM+EVE +EV+FD+LHATA+Q T LGRTILGP +NIK+I ++
Sbjct: 167 LGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKD 226
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L +YI THY PR+V+AA+G V H+E++E K F + + T ++ A P FTGSE
Sbjct: 227 LVDYITTHYKGPRIVLAAAGGVSHDELLELAKFHFGE--SLSTHKGEIPALPPCKFTGSE 284
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
+R+ DD +PLA AVA W PD+I LMV ++G+W+++ GG ++ S+LAQ
Sbjct: 285 IRVRDDKMPLAHLAVAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCH 344
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
+ S +FNT+Y DTGL+G+Y V +P + D+ + + E +L V+E++V RA+N
Sbjct: 345 GNLCHSFQSFNTSYTDTGLWGIYMVCEPATVADMLHVVQKEWMRLCTSVTESEVARAKNL 404
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+V+A ++ V ++IYD+
Sbjct: 405 LKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVNAEIIREVCTKYIYDKSP 464
Query: 361 AIAAMGPIQGLPDYNWFRRRTYW 383
A+AA+GPI+ LPD+N W
Sbjct: 465 AVAAVGPIEQLPDFNQICSNMRW 487
>sp|Q9CXT8|MPPB_MOUSE Mitochondrial-processing peptidase subunit beta OS=Mus musculus
GN=Pmpcb PE=2 SV=1
Length = 489
Score = 409 bits (1051), Expect = e-113, Method: Compositional matrix adjust.
Identities = 196/385 (50%), Positives = 266/385 (69%), Gaps = 2/385 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+KR+ DLE EIENMG HLNAYTSREQT YYAK +D+ A++ILADI+QNST
Sbjct: 106 MAFKGTKKRSQLDLELEIENMGAHLNAYTSREQTVYYAKAFSRDLPRAVEILADIIQNST 165
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+A I RER VILREM+EVE +EV+FD+LHATA+Q T LGRTILGP +NIK+I ++
Sbjct: 166 LGEAEIERERGVILREMQEVETNLQEVVFDYLHATAYQNTALGRTILGPTENIKSINRKD 225
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L +YI THY PR+V+AA+G V H E++E K F A + A P FTGSE
Sbjct: 226 LVDYITTHYKGPRIVLAAAGGVCHNELLELAKFHFGDSLCSHKGA--IPALPPCKFTGSE 283
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
+R+ DD +PLA A+A W PD+I LMV ++G+W+++ GG ++ S+LAQ
Sbjct: 284 IRVRDDKMPLAHLAIAVEAVGWAHPDTICLMVANTLIGNWDRSFGGGMNLSSKLAQLTCH 343
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
+ S +FNT+Y DTGL+G+Y V + + D+ + + E +L V+E++V RA+N
Sbjct: 344 GNLCHSFQSFNTSYTDTGLWGLYMVCEQATVADMLHVVQNEWKRLCTDVTESEVARAKNL 403
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
LK+++LL +DG++P+ EDIGRQ+L Y RRIP EL ARID+VDA TV+RV ++I+D+
Sbjct: 404 LKTNMLLQLDGSTPICEDIGRQMLCYNRRIPIPELEARIDAVDAETVRRVCTKYIHDKSP 463
Query: 361 AIAAMGPIQGLPDYNWFRRRTYWNR 385
AIAA+GPI+ LPD+N W R
Sbjct: 464 AIAALGPIERLPDFNQICSNMRWIR 488
>sp|P11913|MPPB_NEUCR Mitochondrial-processing peptidase subunit beta OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=pep PE=1 SV=1
Length = 476
Score = 393 bits (1009), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/380 (52%), Positives = 270/380 (71%), Gaps = 2/380 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FKGT KRT + LE EIENMG HLNAYTSRE T Y+AK L++DV +DIL DILQNS
Sbjct: 89 LAFKGTTKRTQQQLELEIENMGAHLNAYTSRENTVYFAKALNEDVPKCVDILQDILQNSK 148
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+++ I RERDVILRE EEVE Q EEV+FDHLHATA+Q+ PLGRTILGP +NI+ IT+
Sbjct: 149 LEESAIERERDVILRESEEVEKQLEEVVFDHLHATAYQHQPLGRTILGPRENIRDITRTE 208
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSAD-PTTASQLVANEPAIFTGS 179
L NYI +YTA RMV+ +G V HE++VE K F+KL A P +++ +++ + F GS
Sbjct: 209 LVNYIKNNYTADRMVLVGAGGVPHEQLVEMADKYFSKLPATAPVSSASILSKKKPDFIGS 268
Query: 180 EVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG 239
++RI DD IP A A+A G SW+D D +V QA++G+++K H GS+L+ V
Sbjct: 269 DIRIRDDTIPTANIAIAVEGVSWSDDDYFTGLVTQAIVGNYDKALGNAPHQGSKLSGFVH 328
Query: 240 INEIAESMMAFNTNYKDTGLFGVYAVA-KPDCLDDLAYAIMYETTKLAYRVSEADVTRAR 298
+++A S M+F+T+Y DTGL+G+Y V K D +DDL + + E T+L VSEA+V RA+
Sbjct: 329 KHDLATSFMSFSTSYSDTGLWGIYLVTDKLDRVDDLVHFSLREWTRLCSNVSEAEVERAK 388
Query: 299 NQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDR 358
QLK+S+LL +DGT+ VAEDIGRQ++T GRR+ AE+ ID+V A V AN+ I+D+
Sbjct: 389 AQLKASILLSLDGTTAVAEDIGRQIVTTGRRMSPAEIERIIDAVSAKDVMDFANKKIWDQ 448
Query: 359 DIAIAAMGPIQGLPDYNWFR 378
DIAI+A+G I+GL DY R
Sbjct: 449 DIAISAVGSIEGLFDYARIR 468
>sp|Q00302|MPPB_BLAEM Mitochondrial-processing peptidase subunit beta OS=Blastocladiella
emersonii GN=MPP1 PE=3 SV=1
Length = 465
Score = 384 bits (985), Expect = e-106, Method: Compositional matrix adjust.
Identities = 204/385 (52%), Positives = 259/385 (67%), Gaps = 6/385 (1%)
Query: 3 FKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFD 62
FKGT++RT LE EIENMGGHLNAYTSREQT YYAK+ +DV ++IL DILQNST D
Sbjct: 86 FKGTKQRTQSGLEIEIENMGGHLNAYTSREQTVYYAKLFSQDVAKGVNILGDILQNSTLD 145
Query: 63 QARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQ 122
I RER VILRE EEV+ Q EEV+FDHLHA AF LG TILGP +NI+T+++ LQ
Sbjct: 146 PGAIDRERAVILREAEEVDKQVEEVVFDHLHAAAFPENALGYTILGPKENIQTLSQADLQ 205
Query: 123 NYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSEVR 182
YI +YTA RMV+ +G V H E+ + + F KL P + + PA FTGS+VR
Sbjct: 206 AYIKNNYTADRMVVVGAGNVDHAELCKLAETNFGKL---PQGSGKAKFVRPA-FTGSDVR 261
Query: 183 IIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINE 242
I DD+P A A+A GASWT D L+V AM+GS+++ + G H S+LAQ V +
Sbjct: 262 IRVDDMPTAHIALAVEGASWTSADHWPLLVASAMIGSYDR-AAGNAHPSSKLAQIVAKHN 320
Query: 243 IAESMMAFNTNYKDTGLFGVYAVAKP-DCLDDLAYAIMYETTKLAYRVSEADVTRARNQL 301
+A S +FNT Y DTGL+G+Y + D LDDLA+ + E +LA SE +V A+ QL
Sbjct: 321 LANSFTSFNTTYSDTGLWGIYIQSNNRDNLDDLAHFTVREWMRLATAPSEGEVAIAKQQL 380
Query: 302 KSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIA 361
K+SLLL +DGT+PVAE+IGRQ+L YGRR+ E+ +D+V VKRVAN FIYDRD+A
Sbjct: 381 KTSLLLALDGTTPVAEEIGRQMLAYGRRLSPFEIDRLVDAVTVEDVKRVANEFIYDRDLA 440
Query: 362 IAAMGPIQGLPDYNWFRRRTYWNRY 386
I A+GP++ LPDYN R RY
Sbjct: 441 IVAVGPVECLPDYNRIRSAMNLLRY 465
>sp|Q4W6B5|MPPB_DICDI Mitochondrial-processing peptidase subunit beta OS=Dictyostelium
discoideum GN=mppB PE=1 SV=1
Length = 469
Score = 373 bits (957), Expect = e-102, Method: Compositional matrix adjust.
Identities = 183/386 (47%), Positives = 258/386 (66%), Gaps = 1/386 (0%)
Query: 1 MIFKGTEKR-TARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNS 59
MIFKGT KR T + +E EIENMGG LNA+TSRE + YY KVL +V NA+DIL+DILQNS
Sbjct: 83 MIFKGTAKRPTPQSIETEIENMGGSLNAFTSREHSAYYMKVLKDNVPNAVDILSDILQNS 142
Query: 60 TFDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKE 119
F+ + I +ERD IL E + ++ + +EV+FD LHA AFQ + LGRTILGP +NIK+IT+E
Sbjct: 143 KFETSLIEQERDTILSENDYIQSKEDEVVFDQLHAAAFQGSALGRTILGPVENIKSITRE 202
Query: 120 HLQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGS 179
+Q +I+ +YT R+VI+A+GAV HE++VEQVK+ F + + A F GS
Sbjct: 203 QIQEFINENYTGDRLVISAAGAVNHEQLVEQVKEKFANVKMSQVSKDVKRAAITNDFIGS 262
Query: 180 EVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG 239
E+R+ DD+ PL FAVA WTDPD L ++Q M+G+WN+ GK++ S L + V
Sbjct: 263 ELRVRDDEQPLIHFAVAVRALPWTDPDYFVLELIQTMIGNWNRGIAAGKNIASNLGEIVA 322
Query: 240 INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARN 299
++AES F T Y+DTGLFG Y V +P+ +DDL ++ E ++A ++ +V R +
Sbjct: 323 TEDLAESYSTFFTCYQDTGLFGNYGVCQPERVDDLVAEMLKEWQRIATSCNKNEVERNKQ 382
Query: 300 QLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRD 359
+L ++ L+ DGTS V E IGRQ+LT GRR+ E++ RI+ + + V+RVA+ + D
Sbjct: 383 KLLATTLMQYDGTSKVCEGIGRQILTLGRRLSPFEVYTRINEITVADVQRVASTLLRDVS 442
Query: 360 IAIAAMGPIQGLPDYNWFRRRTYWNR 385
A+ A+GPI PDYN+ + TYWNR
Sbjct: 443 PAVTAIGPIANYPDYNFVKGWTYWNR 468
>sp|Q9Y8B5|MPPB_LENED Mitochondrial-processing peptidase subunit beta OS=Lentinula edodes
GN=mppB PE=3 SV=1
Length = 466
Score = 367 bits (942), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/381 (48%), Positives = 258/381 (67%), Gaps = 3/381 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT +R+ LE E+EN+G HLNAYTSREQT YYAK KDV A+DI++DILQNS
Sbjct: 78 MAFKGTGRRSQHALELEVENIGAHLNAYTSREQTVYYAKSFSKDVPVAVDIISDILQNSK 137
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ I RERDVILRE +EV+ Q EEV+FDHLHA AFQ PLGRTILGP NI +I ++
Sbjct: 138 LESGAIERERDVILREQQEVDKQLEEVVFDHLHAVAFQGQPLGRTILGPKNNILSIQRDD 197
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKL--SADPTTASQLVANEPAIFTG 178
L +YI T+YTA RMV+ +G V H+ +V+ +K F+ L SA+P +L + F G
Sbjct: 198 LASYIQTNYTADRMVLVGTGGVDHQSLVKLAEKHFSSLPVSANPLALGRLSSERKPTFVG 257
Query: 179 SEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRV 238
SE RI DD++P A A+A G W+ PD +MVMQ++ G+W+++ + S L+ +
Sbjct: 258 SEARIRDDELPTAHVAIAVEGVGWSSPDYFPMMVMQSIFGNWDRSLGASSLLSSRLSHII 317
Query: 239 GINEIAESMMAFNTNYKDTGLFGVYAVAKPDC-LDDLAYAIMYETTKLAYRVSEADVTRA 297
N +A S M+F+T+Y DTGL+G+Y V++ LDD + + E T+++ +E +V RA
Sbjct: 318 SSNSLANSFMSFSTSYSDTGLWGIYLVSENLMNLDDTLHFTLKEWTRMSIAPTEGEVERA 377
Query: 298 RNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYD 357
++QLK+ LLL +DGT+ VAEDIGRQ++T G+R+ A++ +D+V +KRVA ++++D
Sbjct: 378 KSQLKAGLLLSLDGTTAVAEDIGRQIVTSGKRMTPAQIENAVDAVSVDDIKRVAQKYLWD 437
Query: 358 RDIAIAAMGPIQGLPDYNWFR 378
+D A+AA G I GL DY R
Sbjct: 438 KDFALAAFGNIDGLKDYGRIR 458
>sp|P31930|QCR1_HUMAN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Homo sapiens
GN=UQCRC1 PE=1 SV=3
Length = 480
Score = 360 bits (923), Expect = 1e-98, Method: Compositional matrix adjust.
Identities = 167/388 (43%), Positives = 255/388 (65%), Gaps = 5/388 (1%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FKGT+ R LE+E+E+MG HLNAY++RE T YY K L KD+ A+++L DI+QN +
Sbjct: 96 LAFKGTKNRPGSALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLGDIVQNCS 155
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ++I +ERDVILREM+E + +V+F++LHATAFQ TPL + + GP++N++ +++
Sbjct: 156 LEDSQIEKERDVILREMQENDASMRDVVFNYLHATAFQGTPLAQAVEGPSENVRKLSRAD 215
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQ--LVANEPAIFTG 178
L Y+ THY APRMV+AA+G V+H+++++ +K L P T ++ + P FTG
Sbjct: 216 LTEYLSTHYKAPRMVLAAAGGVEHQQLLDLAQK---HLGGIPWTYAEDAVPTLTPCRFTG 272
Query: 179 SEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRV 238
SE+R DD +P A A+A G W PD++AL V A++G ++ GG H+ S LA
Sbjct: 273 SEIRHRDDALPFAHVAIAVEGPGWASPDNVALQVANAIIGHYDCTYGGGVHLSSPLASGA 332
Query: 239 GINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRAR 298
N++ +S F+ Y +TGL G + V +DD+ + + + +L +E++V R +
Sbjct: 333 VANKLCQSFQTFSICYAETGLLGAHFVCDRMKIDDMMFVLQGQWMRLCTSATESEVARGK 392
Query: 299 NQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDR 358
N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDAS V+ + +++IYD+
Sbjct: 393 NILRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDASVVREICSKYIYDQ 452
Query: 359 DIAIAAMGPIQGLPDYNWFRRRTYWNRY 386
A+A GPI+ LPDYN R +W R+
Sbjct: 453 CPAVAGYGPIEQLPDYNRIRSGMFWLRF 480
>sp|Q9CZ13|QCR1_MOUSE Cytochrome b-c1 complex subunit 1, mitochondrial OS=Mus musculus
GN=Uqcrc1 PE=1 SV=2
Length = 480
Score = 359 bits (921), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 164/386 (42%), Positives = 255/386 (66%), Gaps = 1/386 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FKGT+ R LE+E+E++G HLNAY++RE T Y K L KD+ +++LADI+QNS+
Sbjct: 96 LAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNSS 155
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ++I +ERDVILREM+E + + V+FD+LHATAFQ TPL + + GP++N++ +++
Sbjct: 156 LEDSQIEKERDVILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTD 215
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L +Y++ HY APRMV+AA+G V+H+++++ +K + +S + P FTGSE
Sbjct: 216 LTDYLNRHYKAPRMVLAAAGGVEHQQLLDLAQKHLSSVS-RVYEEDAVPGLTPCRFTGSE 274
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
+R DD +PLA A+A G W +PD++ L V A++G ++ GG H+ S LA
Sbjct: 275 IRHRDDALPLAHVAIAVEGPGWANPDNVTLQVANAIIGHYDCTYGGGVHLSSPLASVAVA 334
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
N++ +S FN +Y DTGL G + V +DD+ + + + +L +E++VTR +N
Sbjct: 335 NKLCQSFQTFNISYSDTGLLGAHFVCDAMSIDDMVFFLQGQWMRLCTSATESEVTRGKNI 394
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA ++ + +++ YD+
Sbjct: 395 LRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIQEVDAQMLRDICSKYFYDQCP 454
Query: 361 AIAAMGPIQGLPDYNWFRRRTYWNRY 386
A+A GPI+ LPDYN R +W R+
Sbjct: 455 AVAGYGPIEQLPDYNRIRSGMFWLRF 480
>sp|P31800|QCR1_BOVIN Cytochrome b-c1 complex subunit 1, mitochondrial OS=Bos taurus
GN=UQCRC1 PE=1 SV=2
Length = 480
Score = 358 bits (920), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 166/392 (42%), Positives = 255/392 (65%), Gaps = 13/392 (3%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FKGT+ R LE+E+E+MG HLNAY++RE T YY K L KD+ A+++LADI+QN +
Sbjct: 96 LAFKGTKNRPGNALEKEVESMGAHLNAYSTREHTAYYIKALSKDLPKAVELLADIVQNCS 155
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ++I +ERDVIL+E++E + +V+F++LHATAFQ TPL +++ GP++N++ +++
Sbjct: 156 LEDSQIEKERDVILQELQENDTSMRDVVFNYLHATAFQGTPLAQSVEGPSENVRKLSRAD 215
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLS------ADPTTASQLVANEPA 174
L Y+ HY APRMV+AA+G ++H ++++ +K F+ LS A PT + P
Sbjct: 216 LTEYLSRHYKAPRMVLAAAGGLEHRQLLDLAQKHFSGLSGTYDEDAVPTLS-------PC 268
Query: 175 IFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSEL 234
FTGS++ +D +PLA A+A G W PD++AL V A++G ++ GG H+ S L
Sbjct: 269 RFTGSQICHREDGLPLAHVAIAVEGPGWAHPDNVALQVANAIIGHYDCTYGGGAHLSSPL 328
Query: 235 AQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADV 294
A N++ +S FN Y DTGL G + V +DD+ + + + +L +E++V
Sbjct: 329 ASIAATNKLCQSFQTFNICYADTGLLGAHFVCDHMSIDDMMFVLQGQWMRLCTSATESEV 388
Query: 295 TRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRF 354
R +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI VDA V+ V +++
Sbjct: 389 LRGKNLLRNALVSHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIAEVDARVVREVCSKY 448
Query: 355 IYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 386
YD+ A+A GPI+ LPDYN R +W R+
Sbjct: 449 FYDQCPAVAGFGPIEQLPDYNRIRSGMFWLRF 480
>sp|Q68FY0|QCR1_RAT Cytochrome b-c1 complex subunit 1, mitochondrial OS=Rattus
norvegicus GN=Uqcrc1 PE=1 SV=1
Length = 480
Score = 358 bits (919), Expect = 4e-98, Method: Compositional matrix adjust.
Identities = 167/392 (42%), Positives = 256/392 (65%), Gaps = 13/392 (3%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FKGT+ R LE+E+E++G HLNAY++RE T Y K L KD+ +++LADI+QN +
Sbjct: 96 LAFKGTKNRPGNALEKEVESIGAHLNAYSTREHTAYLIKALSKDLPKVVELLADIVQNIS 155
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ++I +ERDVILREM+E + + V+FD+LHATAFQ TPL + + GP++N++ +++
Sbjct: 156 LEDSQIEKERDVILREMQENDASMQNVVFDYLHATAFQGTPLAQAVEGPSENVRRLSRTD 215
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLS------ADPTTASQLVANEPA 174
L +Y+ HY APRMV+AA+G VKH+++++ + F+ +S A P+ P
Sbjct: 216 LTDYLSRHYKAPRMVLAAAGGVKHQQLLDLAQDHFSSVSQVYEEDAVPSIT-------PC 268
Query: 175 IFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSEL 234
FTGSE+R DD +PLA A+A G W +PD++AL V A++G ++ GG H+ S L
Sbjct: 269 RFTGSEIRHRDDALPLAHVAIAVEGPGWANPDNVALQVANAIIGHYDCTYGGGVHLSSPL 328
Query: 235 AQRVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADV 294
A N++ +S FN +Y +TGL G + V +DD+ + + + +L +E++V
Sbjct: 329 ASVAVANKLCQSFQTFNISYSETGLLGAHFVCDAMSIDDMIFFLQGQWMRLCTSATESEV 388
Query: 295 TRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRF 354
TR +N L+++L+ H+DGT+PV EDIGR LLTYGRRIP AE +RI+ VDA V+ V +++
Sbjct: 389 TRGKNILRNALISHLDGTTPVCEDIGRSLLTYGRRIPLAEWESRIEEVDAQMVREVCSKY 448
Query: 355 IYDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 386
YD+ A+A GPI+ L DYN R +W R+
Sbjct: 449 FYDQCPAVAGYGPIEQLSDYNRIRSGMFWLRF 480
>sp|Q9P7X1|MPPB_SCHPO Probable mitochondrial-processing peptidase subunit beta
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=qcr1 PE=2 SV=1
Length = 457
Score = 350 bits (898), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 182/391 (46%), Positives = 255/391 (65%), Gaps = 9/391 (2%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FKGT+ R+ + LE E EN G HLNAYTSREQT YYA V NA+ +LADIL NS+
Sbjct: 71 LAFKGTKNRSQKALELEFENTGAHLNAYTSREQTVYYAHAFKNAVPNAVAVLADILTNSS 130
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ + RER VILRE EEV+ +EV+FDHLHATA+Q PLGRTILGP +NI+++T+E
Sbjct: 131 ISASAVERERQVILREQEEVDKMADEVVFDHLHATAYQGHPLGRTILGPKENIESLTRED 190
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEP----AIF 176
L YI +Y + RM+I+++G++ HEE+V+ +K F L +P +A QL P F
Sbjct: 191 LLQYIKDNYRSDRMIISSAGSISHEELVKLAEKYFGHL--EP-SAEQLSLGAPRGLKPRF 247
Query: 177 TGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQ 236
GSE+R DDD P A A+A G SW PD +VMQA++G+W++ H+ S L+
Sbjct: 248 VGSEIRARDDDSPTANIAIAVEGMSWKHPDYFTALVMQAIIGNWDRAMGASPHLSSRLST 307
Query: 237 RVGINEIAESMMAFNTNYKDTGLFGVYAVAKP-DCLDDLAYAIMYETTKLAYRVSEADVT 295
V +++A S M+F+T+Y DTGL+G+Y V + +DDL + + +L + A+V
Sbjct: 308 IVQQHQLANSFMSFSTSYSDTGLWGIYLVTENLGRIDDLVHFTLQNWARLTV-ATRAEVE 366
Query: 296 RARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFI 355
RA+ QL++SLLL +D T+ +AEDIGRQLLT GRR+ E+ RI + V RVA+ I
Sbjct: 367 RAKAQLRASLLLSLDSTTAIAEDIGRQLLTTGRRMSPQEVDLRIGQITEKDVARVASEMI 426
Query: 356 YDRDIAIAAMGPIQGLPDYNWFRRRTYWNRY 386
+D+DIA++A+G I+GL DYN R NR+
Sbjct: 427 WDKDIAVSAVGSIEGLLDYNRIRSSISMNRW 457
>sp|P10507|MPPB_YEAST Mitochondrial-processing peptidase subunit beta OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS1 PE=1
SV=1
Length = 462
Score = 294 bits (753), Expect = 7e-79, Method: Compositional matrix adjust.
Identities = 152/388 (39%), Positives = 243/388 (62%), Gaps = 11/388 (2%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FKGT+ R+ + +E EIEN+G HLNAYTSRE T YYAK L +D+ A+DIL+DIL S
Sbjct: 75 LAFKGTQNRSQQGIELEIENIGSHLNAYTSRENTVYYAKSLQEDIPKAVDILSDILTKSV 134
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
D + I RERDVI+RE EEV+ +EV+FDHLH ++ PLGRTILGP +NIK+IT+
Sbjct: 135 LDNSAIERERDVIIRESEEVDKMYDEVVFDHLHEITYKDQPLGRTILGPIKNIKSITRTD 194
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEP----AIF 176
L++YI +Y RMV+A +GAV HE++V+ +K F + P + S + P +F
Sbjct: 195 LKDYITKNYKGDRMVLAGAGAVDHEKLVQYAQKYFGHV---PKSESPVPLGSPRGPLPVF 251
Query: 177 TGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQ 236
E I ++ +P A+A G SW+ PD + QA++G+W++ G + S LA
Sbjct: 252 CRGERFIKENTLPTTHIAIALEGVSWSAPDYFVALATQAIVGNWDRAIGTGTNSPSPLAV 311
Query: 237 RVGIN-EIAESMMAFNTNYKDTGLFGVYAVAKPD--CLDDLAYAIMYETTKL-AYRVSEA 292
N +A S M+F+T+Y D+GL+G+Y V + + + I+ E ++ + ++S+A
Sbjct: 312 AASQNGSLANSYMSFSTSYADSGLWGMYIVTDSNEHNVQLIVNEILKEWKRIKSGKISDA 371
Query: 293 DVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN 352
+V RA+ QLK++LLL +DG++ + EDIGRQ++T G+R+ E+F ++D + + AN
Sbjct: 372 EVNRAKAQLKAALLLSLDGSTAIVEDIGRQVVTTGKRLSPEEVFEQVDKITKDDIIMWAN 431
Query: 353 RFIYDRDIAIAAMGPIQGLPDYNWFRRR 380
+ ++ +++ A+G +P+ ++ +
Sbjct: 432 YRLQNKPVSMVALGNTSTVPNVSYIEEK 459
>sp|P43264|QCR1_EUGGR Ubiquinol-cytochrome-c reductase complex core protein I,
mitochondrial OS=Euglena gracilis PE=2 SV=1
Length = 494
Score = 256 bits (655), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 145/379 (38%), Positives = 215/379 (56%), Gaps = 32/379 (8%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT KR+ +D+E +E MG HLNAYTSRE T YY K KDV A+DILADIL NS
Sbjct: 75 MNFKGTGKRSRQDIEFGMEKMGAHLNAYTSREHTCYYVKCFKKDVPEAVDILADILLNSK 134
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNI-KTITKE 119
+ + ER I++E E+VE + +EV+ DHLH+ AF+ + LG +ILGP +NI K+ITK
Sbjct: 135 RTEQDLDAERQTIVQEKEDVEARIDEVLMDHLHSAAFEGSGLGLSILGPLENIQKSITKG 194
Query: 120 HLQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGS 179
+ +++ THYT PRM + SGAV H ++ + K F L S F G
Sbjct: 195 MIDDFVKTHYTGPRMALVGSGAVDHGQLCDLASKYFGALPTGQPKPSGFTR-----FLGG 249
Query: 180 EVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQ--- 236
+ R + PL AVAF + PD+I + V++ +LGS++++ G+ S A+
Sbjct: 250 DKRETNQLNPLTHVAVAFQTPGISHPDAIKIKVLEQLLGSYSRDK--GEAAYSCFARAIV 307
Query: 237 ---------------RVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDC-----LDDLAY 276
+ G N I S+ AF Y D GL G YA+A+P +++ +
Sbjct: 308 MDFYDPKVGQFFRPNKAGHNPI-HSLNAFWAPYSDVGLLGFYAIAEPGKSYGHEWENILH 366
Query: 277 AIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELF 336
M E +++ +SE + RA+NQLK +L +DGT+ +A+DIGRQ+L++G R+P A F
Sbjct: 367 YAMRELIRVSRNISEEEFERAKNQLKLQTMLQLDGTTNIADDIGRQVLSFGARVPLASFF 426
Query: 337 ARIDSVDASTVKRVANRFI 355
++D++ + RV R +
Sbjct: 427 EQLDAISREDLIRVGPRVL 445
>sp|P98080|UCR1_CAEEL Cytochrome b-c1 complex subunit 1, mitochondrial OS=Caenorhabditis
elegans GN=ucr-1 PE=3 SV=2
Length = 471
Score = 226 bits (575), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 131/389 (33%), Positives = 208/389 (53%), Gaps = 8/389 (2%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+I KGT KR + LE E+ +G LN++T R+QT + + +DV +DILAD+L+NS
Sbjct: 86 LIHKGTGKRASAALESELNAIGAKLNSFTERDQTAVFVQAGAQDVEKVVDILADVLRNSK 145
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ + I ER +L+E+E + + V+FD LHA FQ TPL ++LG +++I I+ +
Sbjct: 146 LEASTIDTERVNLLKELEASDDYHQLVLFDMLHAAGFQGTPLALSVLGTSESIPNISAQQ 205
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSAD-PTTASQLVANEPAIFTGS 179
L+ + HY RMV++A G V K F LS + P Q+ + FTGS
Sbjct: 206 LKEWQEDHYRPVRMVLSAVGG-GVSNVSSLADKYFGDLSNEYPRKVPQV---DGTRFTGS 261
Query: 180 EVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG 239
E R +D++P A A G + D++AL + +G W+ + S L Q++G
Sbjct: 262 EYRYRNDNVPHMYAAFAVEGVGYAHKDALALQIANQFIGQWDVTHATSRTAASRLVQKIG 321
Query: 240 INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDD---LAYAIMYETTKLAYRVSEADVTR 296
+ ++ FN NYKDTGLFG+Y VA L+D + ++ +E LA +E +V
Sbjct: 322 HDHGVHNLQHFNINYKDTGLFGIYFVADAHDLNDTSGIMKSVAHEWKHLASAATEEEVAM 381
Query: 297 ARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIY 356
A+NQ +++L +++ + A ++LL G +EL A+I VDA V+ +R +Y
Sbjct: 382 AKNQFRTNLYQNLETNTQKAGFNAKELLYTGNLRQLSELEAQIQKVDAGAVREAISRHVY 441
Query: 357 DRDIAIAAMGPIQGLPDYNWFRRRTYWNR 385
DRD+A +G + P+Y R W R
Sbjct: 442 DRDLAAVGVGRTEAFPNYALTRAGMSWWR 470
>sp|Q4UML9|Y338_RICFE Uncharacterized zinc protease RF_0338 OS=Rickettsia felis (strain
ATCC VR-1525 / URRWXCal2) GN=RF_0338 PE=3 SV=1
Length = 412
Score = 206 bits (523), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 113/367 (30%), Positives = 206/367 (56%), Gaps = 14/367 (3%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT RTA+ + EE + +GGH NAYT E+T YYA+VL ++ + AL+ILADI+QNS
Sbjct: 54 MAFKGTTTRTAKQIAEEFDEIGGHFNAYTGHEKTIYYARVLSENCDKALNILADIIQNSI 113
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F + I +E VIL+E+ + +++I++ +++ ++ PLG+ ILG ++ + + TKEH
Sbjct: 114 FAEEEIAKEYQVILQEIAHSQDNPDDLIYEKFYSSVYKDQPLGKPILGASKTLSSFTKEH 173
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
++I HY A + ++ +G V H+++V ++LF+ L S + PA + G
Sbjct: 174 FLSFIDKHYNAGNLYLSVAGNVDHDKIVSSAERLFSSLKQGE--KSNFL---PAKYIGGN 228
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
I+ D+ + F G + + + + + A++ +S +H+ +L
Sbjct: 229 -SFINKDLEQTTLILGFEGTPYINLERLYRTQLLAIIFGGGMSSRLFQHIREKLG----- 282
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
+A ++ ++N+ Y D+G+F +YA D L+ L + E TK+ +V+E ++ RA+ Q
Sbjct: 283 --LAYAVGSYNSTYSDSGVFTIYASTAHDKLELLYKELKTEITKMTEKVNEEEMIRAKTQ 340
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
L+S+LL+ + + +E+IG+ +G+ IP E+ I ++ A + AN+ I+
Sbjct: 341 LRSNLLMAQEKVAYKSEEIGKNYAAFGKYIPPEEIMEIITNIKADDIINTANK-IFSSIT 399
Query: 361 AIAAMGP 367
A +GP
Sbjct: 400 TSAIIGP 406
>sp|Q1RJ61|Y522_RICBR Uncharacterized zinc protease RBE_0522 OS=Rickettsia bellii (strain
RML369-C) GN=RBE_0522 PE=3 SV=1
Length = 412
Score = 203 bits (517), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 111/367 (30%), Positives = 206/367 (56%), Gaps = 14/367 (3%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+ RTA+ + EE +++GGH NAYT E+T YY++VL ++ N AL I+ADI+QNS
Sbjct: 54 MAFKGTKTRTAKQIAEEFDSIGGHFNAYTGHEKTVYYSRVLSENCNKALAIIADIVQNSA 113
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F + I +E VIL+E+ + ++++++ + + F+ PLG+ ILG ++ I+T ++H
Sbjct: 114 FAEEEIAKEYQVILQEIAHAQDNPDDLVYEKFYNSVFKDQPLGKPILGTSKTIETFNRDH 173
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
+ HY A ++ +G V HEE+V++ ++LF+ L T + PA + G
Sbjct: 174 FLKFTGKHYNAENFYLSIAGNVDHEEIVKEAERLFSSL-----TQGEKSNFSPAKYIGGH 228
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
I+ D+ + F G S+ + + + + A++ +S +H+ +L
Sbjct: 229 -SFINKDLEQTTLILGFEGTSYINLERLYQTQLLAIIFGGGMSSRLFQHIREKLG----- 282
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
+A ++ ++N+ Y D+G+F +YA D L+ LA + E ++A +V + ++ RAR Q
Sbjct: 283 --LAYAVGSYNSPYFDSGVFTIYASTAHDKLELLAAELKNEIKRMAEQVKQEEIERARTQ 340
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
++S+L + + + +E+IG+ +G+ I E+ I ++ A+ + + ANR I+
Sbjct: 341 IRSNLQMAQEKVAYKSEEIGKNYAVFGKYISPEEIMEIIMNIKAADIIQTANR-IFSSSA 399
Query: 361 AIAAMGP 367
A +GP
Sbjct: 400 TSAVIGP 406
>sp|Q92IX7|Y293_RICCN Uncharacterized zinc protease RC0293 OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=RC0293 PE=3 SV=1
Length = 412
Score = 189 bits (480), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 117/377 (31%), Positives = 204/377 (54%), Gaps = 24/377 (6%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+ RTA+ + E + +GGH NAYT E T YYA+VL ++ + AL+ILADI+QNS
Sbjct: 54 MAFKGTKTRTAKQIAEAFDAIGGHFNAYTGHENTVYYARVLSENCDKALNILADIIQNSI 113
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F I +E VI++E+ + ++++++ + ++ PLG++ILG A+ + T TKEH
Sbjct: 114 FSDEEIAKEYQVIMQEIAHHQDNPDDLVYEKFYNKVYREQPLGKSILGTAKTLATFTKEH 173
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
N+I +Y A + ++ +G + H+++V ++LF+ L S + PA + G
Sbjct: 174 FFNFIDKYYNAANLYLSIAGNIDHDKIVIIAEQLFSSLKQG--VKSSFI---PAKYIGGN 228
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQ---- 236
I+ ++ + F G S+ + + + Q L S + G M S L Q
Sbjct: 229 -GFINKELEQTSLVLGFEGTSYINLEKL----YQTHLLSI----IFGGGMSSRLFQSIRE 279
Query: 237 RVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTR 296
++G +A ++ ++N+ Y D+G+F +YA D L+ L I E K+ +VS ++ R
Sbjct: 280 KLG---LAYAVGSYNSAYFDSGVFTIYASTAHDKLELLYKEIKNEIIKMTEQVSTEEILR 336
Query: 297 ARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIY 356
A+ QL+S+L + + + +E+IG+ +G+ I E+ I S+ A + AN+ I+
Sbjct: 337 AKTQLRSNLQMAQEKNTYKSEEIGKNYSVFGQYISPEEIMEIIMSIKADDIINTANK-IF 395
Query: 357 DRDIAIAAMGP--IQGL 371
A +GP +QG
Sbjct: 396 SGTTTSAIIGPNDLQGF 412
>sp|O86835|Y5738_STRCO Uncharacterized zinc protease SCO5738 OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=SCO5738 PE=3
SV=1
Length = 459
Score = 179 bits (453), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 115/374 (30%), Positives = 191/374 (51%), Gaps = 15/374 (4%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
++FKGT KR+A D+ I+ +GG +NA+T++E T YYA+VLD D+ A+D++ D+L S
Sbjct: 84 LLFKGTRKRSALDISSAIDAVGGEMNAFTAKEYTCYYARVLDTDLPLAIDVVCDMLTGSL 143
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ + ER IL E+ E + + D T F LGR +LG + +T +
Sbjct: 144 IQEEDVDVERGAILEEIAMTEDDPGDCVHDLFAHTMFGDNALGRPVLGTVDTVNALTADR 203
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPA---IFT 177
++ + HY +V+AA+G V H +VV QV+ F K A A+Q +A +
Sbjct: 204 IRRFYRKHYDPTHLVVAAAGNVDHNKVVRQVRAAFEKSGALKDPAAQPLAPRAGRRTVRA 263
Query: 178 GSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQR 237
V +I A + G + TD A+ V+ LG GG M S L Q
Sbjct: 264 AGRVELIGRKTEQAHVILGMPGLARTDERRWAMGVLNTALG-------GG--MSSRLFQE 314
Query: 238 VGINE-IAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLA-YRVSEADVT 295
V +A S+ ++ + + D GLFGVYA +P + D+ E +A + +++ ++
Sbjct: 315 VREKRGLAYSVYSYTSGFADCGLFGVYAGCRPSQVHDVLKICRDELDHVAEHGLTDDEIG 374
Query: 296 RARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFI 355
RA QL+ S +L ++ T + IG+ L +G ++ ++ ARI SV V+ VA R +
Sbjct: 375 RAVGQLQGSTVLGLEDTGALMNRIGKSELCWGEQMSVDDMLARIASVTPDDVRAVA-RDV 433
Query: 356 YDRDIAIAAMGPIQ 369
R +++ +GP++
Sbjct: 434 LGRRPSLSVIGPLK 447
>sp|O05945|Y219_RICPR Uncharacterized zinc protease RP219 OS=Rickettsia prowazekii
(strain Madrid E) GN=RP219 PE=3 SV=1
Length = 412
Score = 176 bits (447), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 113/381 (29%), Positives = 200/381 (52%), Gaps = 26/381 (6%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+ RTA+ + EE +++GG+ NAYT E T YYA+VL ++ + AL+ILADI+QNS
Sbjct: 54 MAFKGTKTRTAQQIAEEFDSIGGYFNAYTGHENTVYYARVLSENCHKALNILADIIQNSI 113
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F I +E +I++E+ +++I++ + T ++ PLG++ILG + + T TKEH
Sbjct: 114 FADEEIAKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKGQPLGKSILGTTKTLVTFTKEH 173
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
N+I HY A + ++ +G ++H ++V ++LF L S + PA + G +
Sbjct: 174 FLNFIGKHYNAENLYLSIAGNIEHNKIVMIAEELFASLKQG--VKSSFI---PAKYIGGK 228
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQ---- 236
I ++ + F S+ + + + ++ + G M S L Q
Sbjct: 229 -GFIHKELEQTSLVLGFECTSYINLGQLYQTYLLSI--------IFGGGMSSRLFQSIRE 279
Query: 237 RVGINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTR 296
++G+ + S +N+ Y D+G+F +YA + L+ L I E K+ VS ++ R
Sbjct: 280 KLGLAYVVGS---YNSAYFDSGVFTIYASTAHNKLELLYREIKNEIIKITETVSTEEIIR 336
Query: 297 ARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIY 356
A+ QL+S+L + + + +E+IG+ +G+ I E+ I ++ A + AN+ I+
Sbjct: 337 AKMQLRSNLQMAQEQNTYKSEEIGKNYSVFGKYILPEEIIEIITNIRADDIINTANK-IF 395
Query: 357 DRDIAIAAMGPIQGLPDYNWF 377
+A +GP D N F
Sbjct: 396 SGTTTLAIIGP----NDLNGF 412
>sp|Q68XF0|Y210_RICTY Uncharacterized zinc protease RT0210 OS=Rickettsia typhi (strain
ATCC VR-144 / Wilmington) GN=RT0210 PE=3 SV=1
Length = 412
Score = 176 bits (446), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 106/367 (28%), Positives = 201/367 (54%), Gaps = 14/367 (3%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT+ RTA+ + EE +++GG+ NAYT E T YY +VL ++ + AL+ILADI+QNS
Sbjct: 54 MAFKGTKTRTAQQIAEEFDSIGGYFNAYTGYENTVYYVRVLSENCHKALNILADIIQNSI 113
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F I++E +I++E+ +++I++ + T ++ PLG++ILG A+ + T+EH
Sbjct: 114 FADEEISKEYQIIMQEIAHHHDNPDDLIYETFYNTVYKDQPLGKSILGTAKTLVKFTQEH 173
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
N+I HY A + ++ +G ++H ++V ++LF L T++ PA + G +
Sbjct: 174 FLNFIGKHYNAENLYLSIAGNIEHNKIVIIAEELFASLKQGVTSSFI-----PAKYIGGK 228
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
I ++ + F S+ + + + + +++ +S + + +++G
Sbjct: 229 -GFIHKELEQTSLVLGFECTSYINLEKLYQTYLLSIIFGGGVSS----RLFQSIREKLG- 282
Query: 241 NEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQ 300
+A + ++N+ Y D+G+F +YA + L+ L I E K+ VS ++ RA+ Q
Sbjct: 283 --LAYVVGSYNSAYFDSGVFTIYASTAHEKLELLYSEIKNEIIKITETVSTEELMRAKIQ 340
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDI 360
L+S+L + + S +E+IG+ +G+ I E+ I ++ A + AN+ I+
Sbjct: 341 LRSNLQMAQEQNSYKSEEIGKNYSVFGKYILPEEIIEIITNIKADDIINTANK-IFSGTT 399
Query: 361 AIAAMGP 367
A+A +GP
Sbjct: 400 ALAIIGP 406
>sp|P07256|QCR1_YEAST Cytochrome b-c1 complex subunit 1, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=COR1 PE=1
SV=1
Length = 457
Score = 154 bits (389), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 100/365 (27%), Positives = 185/365 (50%), Gaps = 21/365 (5%)
Query: 22 GGHLNAYTSREQTTYYAKVLDKDVNNALDIL--------ADILQNSTFDQARITRERDVI 73
G L++ SR+ +Y L + +LD L A++L +S F+ + + +
Sbjct: 90 GLALSSNISRDFQSYIVSSLPGSTDKSLDFLNQSFIQQKANLLSSSNFEATKKS-----V 144
Query: 74 LREMEEVE-GQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAP 132
L+++++ E + +HLH+TAFQ TPL G ++++ + L+++ + H+
Sbjct: 145 LKQVQDFEENDHPNRVLEHLHSTAFQNTPLSLPTRGTLESLENLVVADLESFANNHFLNS 204
Query: 133 RMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSEVRIIDDDIPLAQ 192
V+ +G +KHE++V ++ L T ++ V + A F GSEVR+ DD +P A
Sbjct: 205 NAVVVGTGNIKHEDLVNSIESKNLSLQ----TGTKPVLKKKAAFLGSEVRLRDDTLPKAW 260
Query: 193 FAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNT 252
++A G P+ + + GS+N + G +L + ++ ++ F+
Sbjct: 261 ISLAVEGEPVNSPNYFVAKLAAQIFGSYNAFEPASRLQGIKLLDNIQEYQLCDNFNHFSL 320
Query: 253 NYKDTGLFGVY-AVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDG 311
+YKD+GL+G A +DDL + + + +L V++ +V RA++ LK L +
Sbjct: 321 SYKDSGLWGFSTATRNVTMIDDLIHFTLKQWNRLTISVTDTEVERAKSLLKLQLGQLYES 380
Query: 312 TSPV--AEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQ 369
+PV A +G ++L G ++ E F +ID++ VK A + ++D+DIAIA G I+
Sbjct: 381 GNPVNDANLLGAEVLIKGSKLSLGEAFKKIDAITVKDVKAWAGKRLWDQDIAIAGTGQIE 440
Query: 370 GLPDY 374
GL DY
Sbjct: 441 GLLDY 445
>sp|P29677|MPPA_SOLTU Mitochondrial-processing peptidase subunit alpha OS=Solanum
tuberosum GN=MPP PE=1 SV=1
Length = 504
Score = 151 bits (381), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 113/388 (29%), Positives = 191/388 (49%), Gaps = 18/388 (4%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FK T R+ + EIE +GG++ A SRE Y L V +++LAD ++N
Sbjct: 123 MAFKSTLNRSHLRIVREIEAIGGNVTASASREHMIYTYDALKTYVPQMVEMLADCVRNPA 182
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F + + + + E+ E + ++ + +H+ + P G +++ I +
Sbjct: 183 FLDWEVKEQLEKVKAEISEYSKNPQHLLLEAVHSAGYA-GPYGNSLMATEATINRLNSTV 241
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L+ ++ +YTAPRMV+AASG V+HEE ++ + L + L P A+ + ++ G +
Sbjct: 242 LEEFVAENYTAPRMVLAASG-VEHEEFLKVAEPLLSDL---PKVAT--IEEPKPVYVGGD 295
Query: 181 VRIIDDDIPLAQFAVAF--AGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQ 236
R D + FA+AF G ++ +S+ L V+Q ++G S GG K M S L
Sbjct: 296 YRC-QADAEMTHFALAFEVPGGWMSEKESMTLTVLQMLMGGGGSFSAGGPGKGMYSRLYL 354
Query: 237 RVGINEIAE--SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLA--YRVSEA 292
RV +N+ + + AF++ Y +TGLFG+ D + E +A V +
Sbjct: 355 RV-LNQYPQIHAFSAFSSIYNNTGLFGIQGTTSSDFGPQAVDVAVKELIAVANPSEVDQV 413
Query: 293 DVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN 352
+ RA+ KS++L++++ +EDIGRQLLTYG R P ID+V A + V
Sbjct: 414 QLNRAKQATKSAILMNLESRMVASEDIGRQLLTYGERNPVEHFLKAIDAVSAKDIASVVQ 473
Query: 353 RFIYDRDIAIAAMGPIQGLPDYNWFRRR 380
+ I + +A+ G + LP Y+ R
Sbjct: 474 KLI-SSPLTMASYGDVLSLPSYDAVSSR 500
>sp|P11914|MPPA_YEAST Mitochondrial-processing peptidase subunit alpha OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=MAS2 PE=1
SV=1
Length = 482
Score = 150 bits (379), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 113/379 (29%), Positives = 189/379 (49%), Gaps = 20/379 (5%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FK TE R + E +E +GG+ +SRE Y A V ++DV L ++++ ++
Sbjct: 67 LAFKSTEHVEGRAMAETLELLGGNYQCTSSRENLMYQASVFNQDVGKMLQLMSETVRFPK 126
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ + ++ E++EV + E V+ + LH A+ LG ++ P + I +I+K +
Sbjct: 127 ITEQELQEQKLSAEYEIDEVWMKPELVLPELLHTAAYSGETLGSPLICPRELIPSISKYY 186
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L +Y + YT P +AA V HE+ +E +K D + + + A +TG E
Sbjct: 187 LLDYRNKFYT-PENTVAAFVGVPHEKALELTEKYL----GDWQSTHPPITKKVAQYTGGE 241
Query: 181 VRI----IDDDIP-LAQFAVAFAGASWTDPDSIALMVMQAML--GSWNKNSVGGKHMGSE 233
I + ++P L + F G PD AL +Q +L G GK M S
Sbjct: 242 SCIPPAPVFGNLPELFHIQIGFEGLPIDHPDIYALATLQTLLGGGGSFSAGGPGKGMYSR 301
Query: 234 LAQRVGINE--IAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAI---MYET-TKLAY 287
L V +N+ E+ +AFN +Y D+G+FG+ P I MY T
Sbjct: 302 LYTHV-LNQYYFVENCVAFNHSYSDSGIFGISLSCIPQAAPQAVEVIAQQMYNTFANKDL 360
Query: 288 RVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTV 347
R++E +V+RA+NQLKSSLL++++ ED+GRQ+L +GR+IP E+ ++I+ + +
Sbjct: 361 RLTEDEVSRAKNQLKSSLLMNLESKLVELEDMGRQVLMHGRKIPVNEMISKIEDLKPDDI 420
Query: 348 KRVANRFIYDRDIAIAAMG 366
RVA I+ ++ A G
Sbjct: 421 SRVA-EMIFTGNVNNAGNG 438
>sp|Q04805|YMXG_BACSU Uncharacterized zinc protease YmxG OS=Bacillus subtilis (strain
168) GN=ymxG PE=3 SV=3
Length = 409
Score = 150 bits (378), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/375 (28%), Positives = 191/375 (50%), Gaps = 20/375 (5%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FKGT ++AR++ E + +GG +NA+TS+E T YYAKVLD+ N ALD+LAD+ +ST
Sbjct: 51 MFFKGTSTKSAREIAESFDRIGGQVNAFTSKEYTCYYAKVLDEHANYALDVLADMFFHST 110
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
FD+ + +E++V+ E++ E ++++ D L + LG ILG + + + +
Sbjct: 111 FDENELKKEKNVVYEEIKMYEDAPDDIVHDLLSKATYGNHSLGYPILGTEETLASFNGDS 170
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
L+ Y+H +YT R+VI+ +G + + ++ V+K F A +P T
Sbjct: 171 LRQYMHDYYTPDRVVISVAGNIS-DSFIKDVEKWFGSYEAKGKATG---LEKPEFHTEKL 226
Query: 181 VRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI 240
R + A + F G L+V+ N+V G M S L Q V
Sbjct: 227 TR--KKETEQAHLCLGFKGLEVGHERIYDLIVL---------NNVLGGSMSSRLFQDVRE 275
Query: 241 NE-IAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYR--VSEADVTRA 297
++ +A S+ +++++Y+D+G+ +Y + L L+ I ET R ++ ++ +
Sbjct: 276 DKGLAYSVYSYHSSYEDSGMLTIYGGTGANQLQQLSETIQ-ETLATLKRDGITSKELENS 334
Query: 298 RNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYD 357
+ Q+K SL+L ++ T+ G+ L G+ E+ +++V+ V +A R ++
Sbjct: 335 KEQMKGSLMLSLESTNSKMSRNGKNELLLGKHKTLDEIINELNAVNLERVNGLA-RQLFT 393
Query: 358 RDIAIAAMGPIQGLP 372
D A+A + P +P
Sbjct: 394 EDYALALISPSGNMP 408
>sp|O32965|Y855_MYCLE Uncharacterized zinc protease ML0855 OS=Mycobacterium leprae
(strain TN) GN=ML0855 PE=3 SV=1
Length = 445
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 108/375 (28%), Positives = 180/375 (48%), Gaps = 24/375 (6%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
++FK T RTA D+ + I+ +GG LNA+T++E T YYA VLD D+ A+D++AD++ N
Sbjct: 71 LLFKSTSTRTAMDIAQAIDAVGGELNAFTAKEHTCYYAHVLDSDLELAVDLVADVVLNGR 130
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ERDV+L E+ + E+ + D A F P+GR ++G +++ +T+
Sbjct: 131 CAVDDVELERDVVLEEIAMRDDDPEDALGDMFLAALFGDHPVGRPVIGTMESVSAMTRTQ 190
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLF------TKLSADPTTASQLVANEPA 174
L ++ YT RMV+A +G V H+E+V V++ F + SA P ++ + PA
Sbjct: 191 LHSFHVRRYTPERMVVAVAGNVDHDEMVALVREHFGSRLIRGRQSAPPRKSTGRINGGPA 250
Query: 175 IFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSEL 234
+ G D + V G SW AL V+ LG GG + S L
Sbjct: 251 LTLGKR----DAEQTHVLLGVRTPGRSW--EHRWALSVLHTALG-------GG--LSSRL 295
Query: 235 AQRV-GINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEA 292
Q + +A S+ + + D+G VYA P D+ I +A ++EA
Sbjct: 296 FQEIRETRGLAYSVYSALDIFADSGALSVYAACLPGRFADVMQVISEVLASVAGDGITEA 355
Query: 293 DVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN 352
+ A+ L+ ++L ++ ++ +GR L YG+ +ID V V +A+
Sbjct: 356 ECRIAKGSLRGGIILGLEDSNSWMSRLGRSELNYGKYRGIEHTLQQIDEVTVEQVNALAH 415
Query: 353 RFIYDRDIAIAAMGP 367
+ + R A +GP
Sbjct: 416 QLLNKR-YGAAVLGP 429
>sp|Q9ZU25|MPPA1_ARATH Probable mitochondrial-processing peptidase subunit alpha-1
OS=Arabidopsis thaliana GN=At1g51980 PE=1 SV=1
Length = 503
Score = 145 bits (365), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 120/389 (30%), Positives = 193/389 (49%), Gaps = 32/389 (8%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FK T RT L EIE +GG+ +A SREQ +Y L V +++L D ++N
Sbjct: 126 MAFKSTLNRTHFRLVREIEAIGGNTSASASREQMSYTIDALKTYVPEMVEVLIDSVRNPA 185
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F + E + E+ E+ + + +H+ + PL + P + + E
Sbjct: 186 FLDWEVNEELRKMKVEIAELAKNPMGFLLEAIHSAGYS-GPLASPLYAPESALDRLNGEL 244
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADP---TTASQLVANEPAIFT 177
L+ ++ ++TA RMV+AASG V+HEE+++ + L + L P SQ V + T
Sbjct: 245 LEEFMTENFTAARMVLAASG-VEHEELLKVAEPLTSDLPNVPPQLAPKSQYVGGDFRQHT 303
Query: 178 GSEVRIIDDDIPLAQFAVAFAGASWT-DPDSIALMVMQAMLGSWNKNSVGG--KHMGSEL 234
G E FAVAF W + +++ V+Q ++G S GG K M S L
Sbjct: 304 GGEA---------THFAVAFEVPGWNNEKEAVTATVLQMLMGGGGSFSAGGPGKGMHSWL 354
Query: 235 AQRVGINEIAE--SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKL----AYR 288
+RV +NE E S AF + + DTGLFG+Y + P A AI +L +
Sbjct: 355 YRRV-LNEYQEVQSCTAFTSIFNDTGLFGIYGCSSPQFA---AKAIELAAKELKDVAGGK 410
Query: 289 VSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVK 348
V++A + RA+ KS++L++++ AEDIGRQ+LTYG R P + + SVD T+K
Sbjct: 411 VNQAHLDRAKAATKSAVLMNLESRMIAAEDIGRQILTYGERKPVDQF---LKSVDQLTLK 467
Query: 349 RVAN--RFIYDRDIAIAAMGPIQGLPDYN 375
+A+ + + + + + G + +P Y+
Sbjct: 468 DIADFTSKVISKPLTMGSFGDVLAVPSYD 496
>sp|O94745|MPPA_SCHPO Probable mitochondrial-processing peptidase subunit alpha
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=mas2 PE=3 SV=2
Length = 502
Score = 144 bits (363), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/368 (29%), Positives = 178/368 (48%), Gaps = 19/368 (5%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ F+ TE+ +++ ++EN+GG+ TSRE Y A V + DV + +LA+ +
Sbjct: 102 LAFQATERTPVGEMKAKLENLGGNYMCSTSRESMIYQAAVFNDDVKSMSKLLAETVLAPK 161
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ + RD I+ E E+ + + ++ + H TAFQ LG +L + IT
Sbjct: 162 IQEDDLVHYRDSIIYENSELWTKPDALLGEFAHVTAFQNNTLGNCLLCTPDKVNGITATS 221
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
++ Y+ Y + +A +G + E E K+L+ L P+++ + P+ +TG
Sbjct: 222 IREYLKYFYRPEHLTLAYAG-IPQEIAKEITKELYGHL---PSSSLPPLEAIPSHYTGGF 277
Query: 181 VRIIDDDIP-------LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSE 233
+ I + P +A G TDPD AL +Q +LG S GG G
Sbjct: 278 MGIKKSEAPPVPYQQEFTHVVIAMEGLPVTDPDIYALACLQFLLGGGGSFSAGGPGKG-- 335
Query: 234 LAQRVGINEI-----AESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYR 288
+ R+ +N + E+ MAFN +Y D+GLFG++ D A I+ E
Sbjct: 336 MYSRLYLNVLNQYPWVETCMAFNHSYTDSGLFGMFVTILDDAAHLAAPLIIRELCNTVLS 395
Query: 289 VSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTY-GRRIPFAELFARIDSVDASTV 347
V+ + RA+NQLKSSLL++++ ED+GRQ+ T G I E+ +ID++ S +
Sbjct: 396 VTSEETERAKNQLKSSLLMNLESRMISLEDLGRQIQTQNGLYITPKEMIEKIDALTPSDL 455
Query: 348 KRVANRFI 355
RVA R +
Sbjct: 456 SRVARRVL 463
>sp|O04308|MPPA2_ARATH Probable mitochondrial-processing peptidase subunit alpha-2
OS=Arabidopsis thaliana GN=MPPA2 PE=1 SV=1
Length = 499
Score = 143 bits (361), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 114/388 (29%), Positives = 187/388 (48%), Gaps = 20/388 (5%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FK T R+ L EIE +GG+ +A SREQ Y L V +++L D ++N
Sbjct: 122 MAFKSTLNRSHFRLVREIEAIGGNTSASASREQMGYTIDALKTYVPEMVEVLIDSVRNPA 181
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F + E + E+ E + + +H+ + L + P I +T E
Sbjct: 182 FLDWEVNEELRKVKVEIGEFATNPMGFLLEAVHSAGYSGA-LANPLYAPESAITGLTGEV 240
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTA---SQLVANEPAIFT 177
L+N++ +YTA RMV+AASG V HEE+++ V+ L + L P A SQ V + T
Sbjct: 241 LENFVFENYTASRMVLAASG-VDHEELLKVVEPLLSDLPNVPRPAEPKSQYVGGDFRQHT 299
Query: 178 GSEVRIIDDDIPLAQFAVAFAGASWT-DPDSIALMVMQAMLGSWNKNSVGG--KHMGSEL 234
G E FA+AF W + ++I V+Q ++G S GG K M S L
Sbjct: 300 GGEA---------THFALAFEVPGWNNEKEAIIATVLQMLMGGGGSFSAGGPGKGMHSWL 350
Query: 235 AQRV-GINEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLA-YRVSEA 292
R+ ++ +S AF + + +TGLFG+Y P+ + E +A +V++
Sbjct: 351 YLRLLNQHQQFQSCTAFTSVFNNTGLFGIYGCTSPEFASQGIELVASEMNAVADGKVNQK 410
Query: 293 DVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN 352
+ RA+ KS++L++++ AEDIGRQ+LTYG R P + +D + + +
Sbjct: 411 HLDRAKAATKSAILMNLESRMIAAEDIGRQILTYGERKPVDQFLKTVDQLTLKDIADFTS 470
Query: 353 RFIYDRDIAIAAMGPIQGLPDYNWFRRR 380
+ I + + +A G + +P Y+ +R
Sbjct: 471 KVI-TKPLTMATFGDVLNVPSYDSVSKR 497
>sp|P0A5S9|Y2805_MYCBO Uncharacterized zinc protease Mb2805c OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=Mb2805c PE=3 SV=1
Length = 438
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 175/375 (46%), Gaps = 24/375 (6%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
++FK T R+A D+ + ++ +GG LNA+T++E T YYA VL D+ A+D++AD++ N
Sbjct: 64 LLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGR 123
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ERDV+L E+ + E+ + D A F P+GR ++G AQ++ +T+
Sbjct: 124 CAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQ 183
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLF------TKLSADPTTASQLVANEPA 174
LQ++ YT RMV+AA+G V H+ +V V++ F + P + V P
Sbjct: 184 LQSFHLRRYTPERMVVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRVNGSPR 243
Query: 175 IFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSEL 234
+ S D + + G W AL V+ LG GG + S L
Sbjct: 244 LTLVSR----DAEQTHVSLGIRTPGRGWE--HRWALSVLHTALG-------GG--LSSRL 288
Query: 235 AQRVG-INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEA 292
Q V +A S+ + + D+G VYA P+ D+ +A ++EA
Sbjct: 289 FQEVRETRGLAYSVYSALDLFADSGALSVYAACLPERFADVMRVTADVLESVARDGITEA 348
Query: 293 DVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN 352
+ A+ L+ L+L ++ +S +GR L YG+ +I+ V V VA
Sbjct: 349 ECGIAKGSLRGGLVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVA- 407
Query: 353 RFIYDRDIAIAAMGP 367
R + R A +GP
Sbjct: 408 RHLLSRRYGAAVLGP 422
>sp|P0A5S8|Y2782_MYCTU Uncharacterized zinc protease Rv2782c/MT2852 OS=Mycobacterium
tuberculosis GN=Rv2782c PE=3 SV=1
Length = 438
Score = 140 bits (353), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 107/375 (28%), Positives = 175/375 (46%), Gaps = 24/375 (6%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
++FK T R+A D+ + ++ +GG LNA+T++E T YYA VL D+ A+D++AD++ N
Sbjct: 64 LLFKSTPTRSAVDIAQAMDAVGGELNAFTAKEHTCYYAHVLGSDLPLAVDLVADVVLNGR 123
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ERDV+L E+ + E+ + D A F P+GR ++G AQ++ +T+
Sbjct: 124 CAADDVEVERDVVLEEIAMRDDDPEDALADMFLAALFGDHPVGRPVIGSAQSVSVMTRAQ 183
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLF------TKLSADPTTASQLVANEPA 174
LQ++ YT RMV+AA+G V H+ +V V++ F + P + V P
Sbjct: 184 LQSFHLRRYTPERMVVAAAGNVDHDGLVALVREHFGSRLVRGRRPVAPRKGTGRVNGSPR 243
Query: 175 IFTGSEVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSEL 234
+ S D + + G W AL V+ LG GG + S L
Sbjct: 244 LTLVSR----DAEQTHVSLGIRTPGRGWE--HRWALSVLHTALG-------GG--LSSRL 288
Query: 235 AQRVG-INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEA 292
Q V +A S+ + + D+G VYA P+ D+ +A ++EA
Sbjct: 289 FQEVRETRGLAYSVYSALDLFADSGALSVYAACLPERFADVMRVTADVLESVARDGITEA 348
Query: 293 DVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN 352
+ A+ L+ L+L ++ +S +GR L YG+ +I+ V V VA
Sbjct: 349 ECGIAKGSLRGGLVLGLEDSSSRMSRLGRSELNYGKHRSIEHTLRQIEQVTVEEVNAVA- 407
Query: 353 RFIYDRDIAIAAMGP 367
R + R A +GP
Sbjct: 408 RHLLSRRYGAAVLGP 422
>sp|P97997|MPPA_BLAEM Mitochondrial-processing peptidase subunit alpha OS=Blastocladiella
emersonii PE=3 SV=1
Length = 474
Score = 139 bits (351), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 112/375 (29%), Positives = 167/375 (44%), Gaps = 14/375 (3%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FK T T + + + +GG+L +RE Y VL D+ + +LAD
Sbjct: 63 LAFKSTHGATESQVLKTMAGLGGNLFCTATRESILYQGSVLHHDLPRTVQLLADTTLRPA 122
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ I R I E E++ + + I + +HA AF LG +I Q + +T +
Sbjct: 123 LTEEEIAERRATIAFEAEDLHSRPDAFIGEMMHAVAFGGRGLGNSIFCEPQRARNMTSDT 182
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
++ Y T+ RMV+A +G V H E+V+ V K F S ++ E A GS
Sbjct: 183 IREYFATYLHPSRMVVAGTG-VAHAELVDLVSKAFVPSSTRAPSSVTHSDIETAYVGGSH 241
Query: 181 VRIIDDDIP--------LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHM 230
+I P L VAF +T PD + +Q ++G S GG K M
Sbjct: 242 QLVIPKPPPTHPNYEQTLTHVQVAFPVPPFTHPDMFPVSTLQVLMGGGGAFSAGGPGKGM 301
Query: 231 GSELAQRVGINEI--AESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYR 288
S L V +N ES AF Y T LFG+ A P L + E +A
Sbjct: 302 YSRLYTNV-LNRYRWMESCAAFQHAYSSTSLFGISASCVPSFNPHLCNVLAGEFVHMARN 360
Query: 289 VSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVK 348
+S+ +V RA+NQLKSSLL++++ EDIGRQ+L +R+ EL I +V +
Sbjct: 361 LSDEEVARAKNQLKSSLLMNLESQVITVEDIGRQVLAQNQRLEPLELVNNISAVTRDDLV 420
Query: 349 RVANRFIYDRDIAIA 363
RVA + +A
Sbjct: 421 RVAEALVAKPPTMVA 435
>sp|Q9DC61|MPPA_MOUSE Mitochondrial-processing peptidase subunit alpha OS=Mus musculus
GN=Pmpca PE=1 SV=1
Length = 524
Score = 130 bits (328), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 107/378 (28%), Positives = 184/378 (48%), Gaps = 28/378 (7%)
Query: 18 IENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILREM 77
+E GG + TSR+ T Y K ++ +D+LAD++ + I R + E+
Sbjct: 132 LEKHGGICDCQTSRDTTMYAVSADSKGLDTVVDLLADVVLHPRLTDEEIEMTRMAVQFEL 191
Query: 78 EEVEGQT--EEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMV 135
E++ + E ++ + +H AF+ +G P +NI I +E L +Y+ +YT RMV
Sbjct: 192 EDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIAKIDREVLHSYLKNYYTPDRMV 251
Query: 136 IAASGAVKHEEVVEQVKKLFTKLSADPT---TASQLVANEPAIFTGSEVRIIDD------ 186
+A G V+HE +VE +K + A+P + V A +TG +++ D
Sbjct: 252 LAGVG-VEHEHLVECARKYL--VGAEPAWGAPGTVDVDRSVAQYTGGIIKVERDMSNVSL 308
Query: 187 ---DIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINE 242
IP L V S+ + D I V+ M+G S GG G + R+ +N
Sbjct: 309 GPTPIPELTHIMVGLESCSFLEDDFIPFAVLNMMMGGGGSFSAGGPGKG--MFSRLYLNV 366
Query: 243 IAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRA 297
+ +N +Y+DTGL ++A A P + ++ I E + V ++ RA
Sbjct: 367 LNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVELERA 426
Query: 298 RNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIY 356
+ QL S L+++++ + ED+GRQ+L T+ R++P EL I +V +KRVA++ +
Sbjct: 427 KTQLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPH-ELCTLIRNVKPEDIKRVASKMLR 485
Query: 357 DRDIAIAAMGPIQGLPDY 374
+ A+AA+G + LP Y
Sbjct: 486 GKP-AVAALGDLTDLPTY 502
>sp|Q0P5M8|MPPA_BOVIN Mitochondrial-processing peptidase subunit alpha OS=Bos taurus
GN=PMPCA PE=2 SV=1
Length = 525
Score = 126 bits (316), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 108/394 (27%), Positives = 191/394 (48%), Gaps = 25/394 (6%)
Query: 1 MIFKGTEKRTARD-LEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNS 59
+ F TE+ ++D + +E GG + TSR+ T Y K ++ + +LAD++ +
Sbjct: 115 LAFSSTERFDSKDEILLTLEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHP 174
Query: 60 TFDQARITRERDVILREMEEVEGQT--EEVIFDHLHATAFQYTPLGRTILGPAQNIKTIT 117
I R + E+E++ + E ++ + +H A++ +G PA+N+ +
Sbjct: 175 RLTDEEIEMARMAVQFELEDLNMRPDPEPLLTEMVHEAAYRENTVGLHRFCPAENVGKMD 234
Query: 118 KEHLQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKK-LFTKLSADPTTASQLVANEPAIF 176
++ L Y+ +YT RMV+A G V+H ++VE +K L A T A+ V A +
Sbjct: 235 RDVLHAYLRNYYTPDRMVLAGVG-VEHAQLVECARKYLLGTCPAWGTGAAVHVDRSVAQY 293
Query: 177 TGSEVRIIDD---------DIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVG 226
TG V++ D P L + S+ + D I V+ M+G S G
Sbjct: 294 TGGIVKLERDMSNVSLGPTPFPELTHIMIGLESCSFLEGDFIPFAVLNMMMGGGGSFSAG 353
Query: 227 GKHMGSELAQRVGINEIAESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYE 281
G G + R+ +N + +N +Y+DTGL ++A A P + ++ + E
Sbjct: 354 GPGKG--MFTRLYLNVLNRHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIVTRE 411
Query: 282 TTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARID 340
+A V ++ RA+ QL S L+++++ + ED+GRQ+L T R++P EL A I
Sbjct: 412 FVLMAGTVDVVELERAKTQLTSMLMMNLEARPVIFEDVGRQVLATRSRKLPH-ELCALIR 470
Query: 341 SVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDY 374
V +KRVA++ + + A+AA+G + LP Y
Sbjct: 471 DVKPEDIKRVASKMLRGKP-AVAALGDLSELPAY 503
>sp|Q5R513|MPPA_PONAB Mitochondrial-processing peptidase subunit alpha OS=Pongo abelii
GN=PMPCA PE=2 SV=2
Length = 525
Score = 124 bits (311), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 179/376 (47%), Gaps = 24/376 (6%)
Query: 18 IENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILREM 77
+E GG + TSR+ T Y K ++ + +LAD++ + R + E+
Sbjct: 133 LEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLQPRLTDEEVEMTRMTVQFEL 192
Query: 78 EEV--EGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMV 135
E++ E ++ + +H A++ +G P +NI I +E L +Y+ +YT RMV
Sbjct: 193 EDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENIAKINREVLHSYLRNYYTPDRMV 252
Query: 136 IAASGAVKHEEVVEQVKKLFTKLSADPTTASQL-VANEPAIFTG---------SEVRIID 185
+A G V+HE +V+ +K + +A + + A +TG S V +
Sbjct: 253 LAGVG-VEHEHLVDCARKYLLGIQPAWGSAEAVDIDRSVAQYTGGIAKRERDMSNVSLGP 311
Query: 186 DDIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIA 244
IP L V S+ + D I V+ M+G S GG G + R+ +N +
Sbjct: 312 TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKG--MFSRLYLNVLN 369
Query: 245 ESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARN 299
+N +Y+DTGL ++A A P + ++ I E ++ V ++ RA+
Sbjct: 370 RHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMSGTVDAVELERAKT 429
Query: 300 QLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDR 358
QL S L+++++ + ED+GRQ+L T R++P EL I +V VKRVA++ + +
Sbjct: 430 QLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPH-ELCTLIRNVKPEDVKRVASKMLRGK 488
Query: 359 DIAIAAMGPIQGLPDY 374
A+AA+G + LP Y
Sbjct: 489 P-AVAALGDLTDLPTY 503
>sp|Q10713|MPPA_HUMAN Mitochondrial-processing peptidase subunit alpha OS=Homo sapiens
GN=PMPCA PE=1 SV=2
Length = 525
Score = 122 bits (306), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 102/376 (27%), Positives = 178/376 (47%), Gaps = 24/376 (6%)
Query: 18 IENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILREM 77
+E GG + TSR+ T Y K ++ + +LAD++ + R + E+
Sbjct: 133 LEKHGGICDCQTSRDTTMYAVSADSKGLDTVVALLADVVLQPRLTDEEVEMTRMAVQFEL 192
Query: 78 EEV--EGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMV 135
E++ E ++ + +H A++ +G P +N+ I +E L +Y+ +YT RMV
Sbjct: 193 EDLNLRPDPEPLLTEMIHEAAYRENTVGLHRFCPTENVAKINREVLHSYLRNYYTPDRMV 252
Query: 136 IAASGAVKHEEVVEQVKKLFTKLSADPTTASQL-VANEPAIFTG---------SEVRIID 185
+A G V+HE +V+ +K + +A + + A +TG S V +
Sbjct: 253 LAGVG-VEHEHLVDCARKYLLGVQPAWGSAEAVDIDRSVAQYTGGIAKLERDMSNVSLGP 311
Query: 186 DDIP-LAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIA 244
IP L V S+ + D I V+ M+G S GG G + R+ +N +
Sbjct: 312 TPIPELTHIMVGLESCSFLEEDFIPFAVLNMMMGGGGSFSAGGPGKG--MFSRLYLNVLN 369
Query: 245 ESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARN 299
+N +Y+DTGL ++A A P + ++ I E + V ++ RA+
Sbjct: 370 RHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGGTVDTVELERAKT 429
Query: 300 QLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDR 358
QL S L+++++ + ED+GRQ+L T R++P EL I +V VKRVA++ + +
Sbjct: 430 QLTSMLMMNLESRPVIFEDVGRQVLATRSRKLPH-ELCTLIRNVKPEDVKRVASKMLRGK 488
Query: 359 DIAIAAMGPIQGLPDY 374
A+AA+G + LP Y
Sbjct: 489 P-AVAALGDLTDLPTY 503
>sp|P20069|MPPA_RAT Mitochondrial-processing peptidase subunit alpha OS=Rattus
norvegicus GN=Pmpca PE=1 SV=1
Length = 524
Score = 119 bits (298), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 103/376 (27%), Positives = 178/376 (47%), Gaps = 24/376 (6%)
Query: 18 IENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQARITRERDVILREM 77
+E GG + TSR+ T Y K ++ + +LAD++ + I R + E+
Sbjct: 132 LEKHGGICDCQTSRDTTMYAVSADSKGLDTVVGLLADVVLHPRLTDEEIEMTRMAVQFEL 191
Query: 78 EEVEGQT--EEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYIHTHYTAPRMV 135
E++ + E ++ + +H AF+ +G P +NI I +E L +Y+ +YT RMV
Sbjct: 192 EDLNMRPDPEPLLTEMIHEAAFRENTVGLHRFCPVENIGKIDREVLHSYLKNYYTPDRMV 251
Query: 136 IAASGAVKHEEVVEQVKKLFTKLS---ADPTTASQLVANEPAIFTGSE-----VRIIDDD 187
+A G V+HE +VE +K + P L A + GS ++
Sbjct: 252 LAGVG-VEHEHLVECARKYLLGVQPAWGAPGAVWMLTAQWHSTRGGSSRWRETCQMSALR 310
Query: 188 IPLAQFAVAFAGAS---WTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIA 244
P Q + + GA + D I V+ M+G S GG G + R+ +N +
Sbjct: 311 PPRFQSSHIYGGARELLLLEEDFIPFAVLNMMMGGGGSFSAGGPGKG--MFSRLYLNVLN 368
Query: 245 ESMMAFNT-----NYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARN 299
+N +Y+DTGL ++A A P + ++ I E + V ++ RA+
Sbjct: 369 RHHWMYNATSYHHSYEDTGLLCIHASADPRQVREMVEIITKEFILMGRTVDLVELERAKT 428
Query: 300 QLKSSLLLHIDGTSPVAEDIGRQLL-TYGRRIPFAELFARIDSVDASTVKRVANRFIYDR 358
QL S L+++++ + ED+GRQ+L T+ R++P EL I +V +KRVA++ + +
Sbjct: 429 QLMSMLMMNLESRPVIFEDVGRQVLATHSRKLPH-ELCTLIRNVKPEDIKRVASKMLRGK 487
Query: 359 DIAIAAMGPIQGLPDY 374
A+AA+G + LP Y
Sbjct: 488 P-AVAALGDLTDLPTY 502
>sp|Q9DB77|QCR2_MOUSE Cytochrome b-c1 complex subunit 2, mitochondrial OS=Mus musculus
GN=Uqcrc2 PE=1 SV=1
Length = 453
Score = 107 bits (267), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 91/369 (24%), Positives = 173/369 (46%), Gaps = 13/369 (3%)
Query: 6 TEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQAR 65
T+ ++ + IE +GG L+ +RE Y + + D+ ++ L ++ F +
Sbjct: 91 TKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRSDIEILMEFLLNVTTAPEFRRWE 150
Query: 66 ITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYI 125
+ R + + ++ I ++LH A++ L + P + IT E L ++
Sbjct: 151 VAALRSQLKIDKAVAFQNSQTRIIENLHDVAYK-NALANPLYCPDYRMGKITSEELHYFV 209
Query: 126 HTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSEVRIID 185
H+T+ RM + G V H V++QV + F + +A A + G E+R +
Sbjct: 210 QNHFTSARMALVGLG-VSHS-VLKQVAEQFLNMRGGLG-----LAGAKAKYRGGEIREQN 262
Query: 186 DDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAE 245
D L A+ A+ + ++ A V+Q +LG+ + G + S L+Q V
Sbjct: 263 GD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGSHQP 320
Query: 246 -SMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLKS 303
+ AFN +Y D+GLFG+Y +++ ++ A + +A +S ADV A+N+LK+
Sbjct: 321 FDVSAFNASYSDSGLFGIYTISQAAAAGEVINAAYNQVKAVAQGNLSSADVQAAKNKLKA 380
Query: 304 SLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIA 363
L+ ++ + +IG Q L G +P + + +IDSV + V + A +F+ + ++A
Sbjct: 381 GYLMSVETSEGFLSEIGSQALAAGSYMPPSTVLQQIDSVADADVVKAAKKFVSGKK-SMA 439
Query: 364 AMGPIQGLP 372
A G + P
Sbjct: 440 ASGNLGHTP 448
>sp|P23004|QCR2_BOVIN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Bos taurus
GN=UQCRC2 PE=1 SV=2
Length = 453
Score = 105 bits (263), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 95/371 (25%), Positives = 179/371 (48%), Gaps = 17/371 (4%)
Query: 6 TEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQAR 65
T+ ++ + IE +GG L+ ++RE Y + L DV+ ++ L ++ F +
Sbjct: 91 TKGASSFKITRGIEAVGGKLSVTSTRENMAYTVECLRDDVDILMEFLLNVTTAPEFRRWE 150
Query: 66 ITRERDVILREMEEVEGQTEEV-IFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNY 124
+ + LR + V Q + + ++LHA A++ L ++ P I +T L +Y
Sbjct: 151 VAALQPQ-LRIDKAVALQNPQAHVIENLHAAAYR-NALANSLYCPDYRIGKVTPVELHDY 208
Query: 125 IHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSEVRII 184
+ H+T+ RM + G V H V++QV + F + ++ A + G E+R
Sbjct: 209 VQNHFTSARMALIGLG-VSHP-VLKQVAEQFLNIRGGLG-----LSGAKAKYHGGEIREQ 261
Query: 185 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRV--GINE 242
+ D L A+ A+ ++ A V+Q +LG+ + G + S L Q V G+++
Sbjct: 262 NGD-SLVHAALVAESAAIGSAEANAFSVLQHVLGA-GPHVKRGSNATSSLYQAVAKGVHQ 319
Query: 243 IAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQL 301
+ + AFN +Y D+GLFG Y +++ D+ A + +A +S DV A+N+L
Sbjct: 320 PFD-VSAFNASYSDSGLFGFYTISQAASAGDVIKAAYNQVKTIAQGNLSNPDVQAAKNKL 378
Query: 302 KSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIA 361
K+ L+ ++ + +++G Q L G P + + +ID+V + V A +F+ R +
Sbjct: 379 KAGYLMSVESSEGFLDEVGSQALAAGSYTPPSTVLQQIDAVADADVINAAKKFVSGRK-S 437
Query: 362 IAAMGPIQGLP 372
+AA G + P
Sbjct: 438 MAASGNLGHTP 448
>sp|P22695|QCR2_HUMAN Cytochrome b-c1 complex subunit 2, mitochondrial OS=Homo sapiens
GN=UQCRC2 PE=1 SV=3
Length = 453
Score = 105 bits (261), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 93/370 (25%), Positives = 173/370 (46%), Gaps = 15/370 (4%)
Query: 6 TEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQAR 65
T+ ++ + IE +GG L+ +RE Y + L DV+ ++ L ++ F +
Sbjct: 91 TKGASSFKITRGIEAVGGKLSVTATRENMAYTVECLRGDVDILMEFLLNVTTAPEFRRWE 150
Query: 66 ITRERDVILREMEEVEGQTEEV-IFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNY 124
+ + L+ + V Q + + ++LHA A++ L + P I +T E L +
Sbjct: 151 VA-DLQPQLKIDKAVAFQNPQTHVIENLHAAAYR-NALANPLYCPDYRIGKVTSEELHYF 208
Query: 125 IHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSEVRII 184
+ H+T+ RM + G V H V++QV + F + ++ A + G E+R
Sbjct: 209 VQNHFTSARMALIGLG-VSHP-VLKQVAEQFLNMRGGLG-----LSGAKANYRGGEIREQ 261
Query: 185 DDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG-INEI 243
+ D L A A ++ A V+Q +LG+ + G + S L Q V +
Sbjct: 262 NGD-SLVHAAFVAESAVAGSAEANAFSVLQHVLGA-GPHVKRGSNTTSHLHQAVAKATQQ 319
Query: 244 AESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQLK 302
+ AFN +Y D+GLFG+Y +++ D+ A + +A +S DV A+N+LK
Sbjct: 320 PFDVSAFNASYSDSGLFGIYTISQATAAGDVIKAAYNQVKTIAQGNLSNTDVQAAKNKLK 379
Query: 303 SSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAI 362
+ L+ ++ + E++G Q L G +P + + +IDSV + + A +F+ + ++
Sbjct: 380 AGYLMSVESSECFLEEVGSQALVAGSYMPPSTVLQQIDSVANADIINAAKKFVSGQK-SM 438
Query: 363 AAMGPIQGLP 372
AA G + P
Sbjct: 439 AASGNLGHTP 448
>sp|P32551|QCR2_RAT Cytochrome b-c1 complex subunit 2, mitochondrial OS=Rattus
norvegicus GN=Uqcrc2 PE=1 SV=2
Length = 452
Score = 104 bits (259), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 89/358 (24%), Positives = 165/358 (46%), Gaps = 18/358 (5%)
Query: 6 TEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFDQAR 65
T+ ++ + IE +GG L+ +RE Y + + D+ ++ L ++ F +
Sbjct: 90 TKGASSFKITRGIEAVGGKLSVTATRENMAYTVEGIRDDIEILMEFLLNVTTAPEFRRWE 149
Query: 66 ITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEHLQNYI 125
+ R + + + I ++LH A++ L + P + IT E L ++
Sbjct: 150 VAALRSQLKIDKAVAFQNPQTRIIENLHDVAYK-NALANPLYCPDYRMGKITSEELHYFV 208
Query: 126 HTHYTAPRMVIAASGAVKH---EEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSEVR 182
H+T+ RM + G V H +EV EQ + L +A A + G E+R
Sbjct: 209 QNHFTSARMALVGLG-VSHSILKEVAEQFLNIRGGLG---------LAGAKAKYRGGEIR 258
Query: 183 IIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGI-N 241
+ D L A+ A+ + ++ A V+Q +LG+ + G + S L+Q V +
Sbjct: 259 EQNGD-NLVHAAIVAESAAIGNAEANAFSVLQHLLGA-GPHIKRGNNTTSLLSQSVAKGS 316
Query: 242 EIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAY-RVSEADVTRARNQ 300
+ + AFN +Y D+GLFG+Y V++ D+ A + +A +S ADV A+N+
Sbjct: 317 QQPFDVSAFNASYSDSGLFGIYTVSQAAAAGDVINAAYNQVKAVAQGNLSSADVQAAKNK 376
Query: 301 LKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDR 358
LK+ L+ ++ + +IG Q L G +P + +ID+V + V + A +F+ +
Sbjct: 377 LKAGYLMSVETSEGFLSEIGSQALATGSYMPPPTVLQQIDAVADADVVKAAKKFVSGK 434
>sp|Q54F93|MPPA2_DICDI Mitochondrial-processing peptidase subunit alpha-2 OS=Dictyostelium
discoideum GN=mppA2 PE=1 SV=1
Length = 445
Score = 103 bits (258), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/373 (24%), Positives = 170/373 (45%), Gaps = 11/373 (2%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ F+ + +++ +IE G A SR+ + L L+ LA+I + T
Sbjct: 72 LAFESNTNKLGIEVQRDIEVSGSTAFAQASRDNLLIALQTLPNRSLQMLNNLANITK-PT 130
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ ++I++E E + IF+ +H TAF+ LGR ++ P N+ ITK+
Sbjct: 131 LPYHEVRDVTEIIVKESEAYNHDSYSSIFESVHQTAFRGKTLGRPLVAPICNLGNITKDA 190
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGSE 180
+ N++++ Y M++ G + H E++E+ +K+ D ++ S ++NE A + G E
Sbjct: 191 VTNWVNSTYKPSNMILVGVG-LSHNELIEEAEKV--TFGNDESSTS--ISNETAQYIGGE 245
Query: 181 VRIIDDDIPLAQFAVAFAGASWTD-PDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG 239
+ ++ +AF G + ++ D A V+Q++LG+ + G S L
Sbjct: 246 S--LKYSSGNSKVVLAFEGTAQSNIKDVAAFSVLQSILGNGCPKTAPGHGRTSRLFSLTK 303
Query: 240 INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARN 299
N + AFN Y D+GLFGV A + + I E A + + ++ RA+
Sbjct: 304 NNSNIVNSEAFNLTYGDSGLFGVVAEVEGATVGKTVSLITSEIVA-ASKTAGQELERAKA 362
Query: 300 QLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRD 359
KSS+L + + E IG+Q + + + AE I V + +KRVA + +
Sbjct: 363 VTKSSVLEQAESRTSALEFIGKQAIYTDKVLTPAEFAEEISKVTSEDIKRVAKKMTSKKP 422
Query: 360 IAIAAMGPIQGLP 372
+ +G + P
Sbjct: 423 -TLVVVGDVSDAP 434
>sp|P55679|Y4WA_RHISN Uncharacterized zinc protease y4wA OS=Rhizobium sp. (strain NGR234)
GN=NGR_a01040 PE=3 SV=1
Length = 512
Score = 88.6 bits (218), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/370 (23%), Positives = 167/370 (45%), Gaps = 18/370 (4%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
++FKGT+K + + +I +GG NA+T + T Y+ V + + ++ AD +++
Sbjct: 136 LMFKGTKKHPSGEFSAKIAEIGGEENAFTGSDYTAYHQTVTPESLRTMMEFEADRMRHLV 195
Query: 61 FDQARITRERDVILREME-EVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKE 119
A I ERDVIL E VE E+++ + + AT +Q P +G ++ + +E
Sbjct: 196 LTDAVIVPERDVILEERRWRVENDPEQLLEEEMQATLYQNHPYRIPTIGWMHEMEQLNRE 255
Query: 120 HLQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGS 179
+ +Y ++ +G V V + + F L P +++ EP T
Sbjct: 256 DALKFYDRYYAPNNAILVVAGDVDAGRVRQLADETFGTLPRGPDLPARVRPQEPEQNTKR 315
Query: 180 EVRIIDDDIPLAQFAVAFAGASW---TDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQ 236
V + D + + F ++ S+ ++ AL ++ +LG GG S + Q
Sbjct: 316 IVALTDPRVTVPSFQKSWVTTSYGTAEQGEAEALDILSEILG-------GGTR--SRIYQ 366
Query: 237 RVGINE-IAESMMA-FNTNYKDTGLFGVYAVAKPDC-LDDLAYAIMYETTK-LAYRVSEA 292
+ + + IA S A FN D F V+ + + ++++ AI E K + + +++
Sbjct: 367 ELVVKQAIASSGGAYFNGRSLDPSSFTVFGSPRGEAKIEEVEDAIDAEIRKIIEFGITDV 426
Query: 293 DVTRARNQLKSSLLLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVAN 352
++ +A+N+ S++ D S +A G L T RI +V A+ V+ A
Sbjct: 427 ELEKAKNRFVRSIIFARDSQSGMAGIYGAALATGDTAHDVEAWPLRIRAVKAAEVQAAAR 486
Query: 353 RFIY-DRDIA 361
+++ DR +A
Sbjct: 487 KYLSPDRSVA 496
>sp|P23955|MPPA_NEUCR Mitochondrial-processing peptidase subunit alpha OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=mpp PE=1 SV=2
Length = 577
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/170 (37%), Positives = 95/170 (55%), Gaps = 10/170 (5%)
Query: 195 VAFAGASWTDPDSIALMVMQAMLGSWNKNSVGG--KHMGSELAQRVGINEIA--ESMMAF 250
+AF G + +D D AL +Q +LG S GG K M S L V +N+ ES +AF
Sbjct: 361 LAFEGLAISDDDIYALATLQTLLGGGGSFSAGGPGKGMYSRLYTNV-LNQHGWVESCVAF 419
Query: 251 NTNYKDTGLFGVYAVAKPD----CLDDLAYAIMYETTKLAYR-VSEADVTRARNQLKSSL 305
N +Y D+GLFG+ A P L + + TT Y + E +V+RA+NQL+SSL
Sbjct: 420 NHSYTDSGLFGIAASCYPGRTLPMLQVMCRELHALTTDHGYSALGELEVSRAKNQLRSSL 479
Query: 306 LLHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFI 355
L++++ ED+GRQ+ +GR+IP E+ RI+ + ++RVA R +
Sbjct: 480 LMNLESRMVELEDLGRQVQVHGRKIPVREMTRRINELTVKDLRRVAKRVV 529
Score = 79.3 bits (194), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 1/160 (0%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
+ FK T RTA ++ E +E +GG++ +SRE Y A +K + A++++A+ +++
Sbjct: 100 LAFKSTSTRTADEMLETVEKLGGNIQCASSRESMMYQAATFNKAIPTAVELMAETIRDPK 159
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
+ + E+ E+ + E ++ + +H AF+ LG +L P + + I ++
Sbjct: 160 LTDEELEGQIMTAQYEVNEIWSKAELILPELVHMAAFKDNTLGNPLLCPKERLDYINRDV 219
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSA 160
+Q Y Y R+V+A +G V HE V+ +K F + A
Sbjct: 220 IQTYRDAFYRPERLVVAFAG-VPHERAVKLAEKYFGDMKA 258
>sp|Q5UPX9|YL233_MIMIV Putative zinc protease L233 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L233 PE=3 SV=1
Length = 440
Score = 78.2 bits (191), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 84/175 (48%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M+FK T +++ +L E+++ G + NA T+ + T Y+ ++ LDI+ DI +
Sbjct: 54 MMFKRTTNKSSDELFSELDSTGANYNAITTTQNTCYFLSGNSNYIDKLLDIMLDIFLHPN 113
Query: 61 FDQARITRERDVILREMEEVEGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKEH 120
F I RER VI+ EM+ Q + + +H F+ T L + ++G ++IK I K
Sbjct: 114 FVSDDIERERKVIMEEMKIRADQPQSSMTYQIHEVYFKNTSLSQKVIGSIESIKNIDKND 173
Query: 121 LQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAI 175
L+ + T Y + +G V +++K KL+ + + + P I
Sbjct: 174 LEKFYSTFYRPNNTIFIMAGNFDVFSVYDKIKSNLEKLTNNNFCTTSYLHEGPII 228
>sp|O60044|QCR2_NEUCR Cytochrome b-c1 complex subunit 2, mitochondrial OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=qcr-2 PE=2 SV=2
Length = 454
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/376 (24%), Positives = 161/376 (42%), Gaps = 22/376 (5%)
Query: 3 FKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNSTFD 62
FK T KRTA + E E +GG L AY +RE A L +D+ ++LA+++ + +
Sbjct: 86 FKNTNKRTALRITRESELLGGQLQAYHTREAVVLQASFLREDLPYFTELLAEVISETKYT 145
Query: 63 QARITRERDVILREMEEVEGQTEEVIFDHLHATAFQY---TPLGRTILGPAQNIKTITKE 119
+ + E ++ + + + D H AF +PL T+ P + + +
Sbjct: 146 THEFHELVENCIHE-KQAKLDSAAIALDAAHNVAFHSGLGSPLYPTVDTPTSSY--LNEN 202
Query: 120 HLQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLFTKLSADPTTASQLVANEPAIFTGS 179
+ + + Y + + A GA + + V+ F + P T+S + + + G
Sbjct: 203 SVAAFANLAYNKANIAVVADGA-SQAGLEKWVEPFFKGV---PATSSGNLNTAASKYFGG 258
Query: 180 EVRIIDDDIPLAQFAVAFAGASWTDPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVG 239
E R+ + +AF GAS P +++ + G N G + LA+
Sbjct: 259 EQRVAKNGK--NAIVIAFPGASLGVPHPETSVLVGLLGGVSNIKWSPGFSL---LAKATA 313
Query: 240 INEIAESMMAFNTNYKDTGLFGVYAVAKPDCLDDLAY-AIMYETTKLAYRVSEADVTRAR 298
N AE+ A N Y D GL + K + +A A+ A VS+ D+T+A
Sbjct: 314 ANPGAEA-FAHNYAYSDAGLLAIQITGKGAAVGKVAVEAVKGLKAIAAGGVSKEDLTKAI 372
Query: 299 NQLKSSLL--LHIDGTSPVAEDIGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIY 356
+ K +LL + GT V G LL G+ I AE ++ V A ++ A + +
Sbjct: 373 AKAKFNLLSASEVSGTGLV--HAGANLLAGGKPIQVAETLKALEGVTAEKLQAAAKKLL- 429
Query: 357 DRDIAIAAMGPIQGLP 372
+ +++A+G + LP
Sbjct: 430 EGKASVSAVGDLHVLP 445
>sp|Q86A84|MPPA1_DICDI Mitochondrial-processing peptidase subunit alpha-1 OS=Dictyostelium
discoideum GN=mppA1 PE=1 SV=1
Length = 654
Score = 68.6 bits (166), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 84/156 (53%), Gaps = 2/156 (1%)
Query: 1 MIFKGTEKRTARDLEEEIENMGGHLNAYTSREQTTYYAKVLDKDVNNALDILADILQNST 60
M FK T+ + ++ +E+E + + A +SRE +VL KD+ L IL+D +++ T
Sbjct: 192 MTFKETKNNSTSEIIKELEEISMNAMASSSREMINVSLEVLRKDLEFVLSILSDQIKSPT 251
Query: 61 FDQARITRERDVILREMEEV-EGQTEEVIFDHLHATAFQYTPLGRTILGPAQNIKTITKE 119
+ + + + +V +R E + +++++ + L AF LG ++ + + IT+E
Sbjct: 252 YSEEELREQIEVCIRNYEMITNSSSDQLMTEILMGVAFGDAGLGNLVIATPEQYQNITRE 311
Query: 120 HLQNYIHTHYTAPRMVIAASGAVKHEEVVEQVKKLF 155
L + + +Y +VI+ +GA +H +V+E V K F
Sbjct: 312 KLFDALRKYYVGKNIVISVTGA-EHSQVIELVDKYF 346
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/186 (21%), Positives = 83/186 (44%), Gaps = 11/186 (5%)
Query: 204 DPDSIALMVMQAMLGSWNKNSVGGKHMGSELAQRVGINEIAESMMAFNTN-----YKDTG 258
+ D I +V+Q++LG + S GG G + R+ +N + S N + +
Sbjct: 464 NKDIINGLVLQSLLGGGSSYSTGGPGKG--MQSRLNLNVVYSSHRVKNCHAFLFVFNKVS 521
Query: 259 LFGVYAVAKPDCLDDLAYAIMYETTKLAYRVSEADVTRARNQLKSSLLLHIDGTSPVAED 318
LFG+ + L D ++ E L +++ ++ RA+ KS +L +++ S +D
Sbjct: 522 LFGISLTTQSGFLQDGIELVLQELLMLRSSMTQQELERAKRSQKSQILQNLEMRSVQCDD 581
Query: 319 IGRQLLTYGRRIPFAELFARIDSVDASTVKRVANRFIYDRDIAIAAMG----PIQGLPDY 374
+ R +L++G ++ IDSV +K++ ++ ++ + PI Y
Sbjct: 582 MARHILSFGSYKSPEQICKLIDSVTLDDIKKLISKLAQSNPSVVSIVANENEPILTAEQY 641
Query: 375 NWFRRR 380
N ++
Sbjct: 642 NQIVKQ 647
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 135,330,294
Number of Sequences: 539616
Number of extensions: 5352863
Number of successful extensions: 16691
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 40
Number of HSP's that attempted gapping in prelim test: 16506
Number of HSP's gapped (non-prelim): 123
length of query: 386
length of database: 191,569,459
effective HSP length: 119
effective length of query: 267
effective length of database: 127,355,155
effective search space: 34003826385
effective search space used: 34003826385
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)