Query 016632
Match_columns 386
No_of_seqs 249 out of 1576
Neff 5.4
Searched_HMMs 13730
Date Mon Mar 25 16:51:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016632.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016632hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1iyma_ g.44.1.1 (A:) EL5 RING 99.4 3.7E-14 2.7E-18 103.7 3.8 50 31-80 4-54 (55)
2 d1chca_ g.44.1.1 (A:) Immediat 99.3 3.1E-13 2.3E-17 102.3 3.7 47 32-80 5-51 (68)
3 d1fbva4 g.44.1.1 (A:356-434) C 99.2 2.7E-12 2E-16 100.0 5.6 49 32-83 23-72 (79)
4 d1g25a_ g.44.1.1 (A:) TFIIH Ma 99.2 3.3E-12 2.4E-16 95.9 5.2 54 31-84 2-58 (65)
5 d2baya1 g.44.1.2 (A:1-56) Pre- 99.2 1.7E-12 1.2E-16 94.9 2.8 50 33-84 1-50 (56)
6 d1v87a_ g.44.1.1 (A:) Deltex p 99.2 7.1E-12 5.1E-16 103.0 5.5 56 27-82 20-95 (114)
7 d1rmda2 g.44.1.1 (A:1-86) V(D) 99.2 4.2E-12 3E-16 100.8 3.7 51 32-85 23-74 (86)
8 d1jm7a_ g.44.1.1 (A:) brca1 RI 99.2 1.6E-12 1.1E-16 105.6 1.2 50 32-84 21-73 (103)
9 d1ur6b_ g.44.1.1 (B:) Not-4 N- 99.2 4.4E-12 3.2E-16 91.3 3.0 49 33-81 1-51 (52)
10 d3dplr1 g.44.1.1 (R:19-106) RI 99.2 8.3E-12 6.1E-16 98.8 4.8 53 30-82 19-86 (88)
11 d1jm7b_ g.44.1.1 (B:) bard1 RI 99.2 2.6E-12 1.9E-16 103.2 1.9 58 32-93 22-79 (97)
12 d1t1ha_ g.44.1.2 (A:) E3 ubiqu 99.1 1.5E-11 1.1E-15 94.9 5.1 61 30-93 6-67 (78)
13 d2c2la2 g.44.1.2 (A:225-304) S 99.1 1.5E-11 1.1E-15 95.3 5.0 62 31-95 6-68 (80)
14 d1wgma_ g.44.1.2 (A:) Ubiquiti 99.0 9.6E-11 7E-15 94.6 6.3 63 31-96 21-84 (98)
15 d1bora_ g.44.1.1 (A:) Acute pr 99.0 3.1E-11 2.2E-15 88.3 1.0 47 31-83 5-51 (56)
16 d1vyxa_ g.44.1.3 (A:) IE1B pro 98.9 3.3E-10 2.4E-14 83.2 4.3 55 27-81 1-59 (60)
17 d1wima_ g.44.1.1 (A:) UbcM4-in 98.2 1.5E-07 1.1E-11 74.0 2.4 46 32-77 5-58 (94)
18 d1fp0a1 g.50.1.2 (A:19-88) Nuc 84.7 0.17 1.3E-05 36.6 1.7 49 29-80 4-56 (70)
19 d2cs3a1 g.44.1.3 (A:8-87) Prot 84.4 0.7 5.1E-05 34.0 5.0 41 28-68 4-45 (80)
20 d1weoa_ g.44.1.1 (A:) Cellulos 81.6 1.1 8.2E-05 34.0 5.3 54 27-80 11-69 (93)
21 d1f62a_ g.50.1.2 (A:) Williams 80.9 0.33 2.4E-05 32.7 1.8 44 34-77 2-49 (51)
22 d1mm2a_ g.50.1.2 (A:) Mi2-beta 80.8 0.13 9.4E-06 36.3 -0.4 48 28-78 5-56 (61)
23 d1wema_ g.50.1.2 (A:) Death as 75.8 0.75 5.5E-05 33.1 2.6 50 28-78 12-70 (76)
24 d1wila_ g.50.1.3 (A:) Hypothet 74.1 1.1 7.9E-05 33.9 3.2 36 29-65 12-47 (89)
25 d1wesa_ g.50.1.2 (A:) PHD Inhi 73.6 0.75 5.5E-05 33.4 2.1 47 27-78 11-65 (71)
26 d1z60a1 g.49.1.2 (A:328-386) T 73.3 0.6 4.4E-05 33.1 1.4 44 32-75 15-58 (59)
27 d1wewa_ g.50.1.2 (A:) Sumoylat 66.0 1.9 0.00014 31.3 3.0 49 28-78 12-72 (78)
28 d1wepa_ g.50.1.2 (A:) PHD fing 59.3 9.6 0.0007 27.3 5.9 47 33-79 12-64 (79)
29 d1weva_ g.50.1.2 (A:) PHD fing 54.0 0.97 7E-05 33.5 -0.7 47 32-78 16-72 (88)
30 d1zbdb_ g.50.1.1 (B:) Effector 48.8 3.8 0.00028 32.2 2.2 36 27-62 43-80 (124)
31 d1we9a_ g.50.1.2 (A:) PHD fing 48.8 2.9 0.00021 28.9 1.3 48 31-78 5-58 (64)
32 d1joca1 g.50.1.1 (A:1348-1411) 40.4 7.3 0.00053 27.1 2.3 35 29-63 5-40 (64)
33 d1v6ga2 g.39.1.3 (A:42-81) Act 39.9 9 0.00066 24.5 2.4 30 33-63 1-30 (40)
34 d2jnea1 g.41.18.1 (A:1-71) Hyp 35.1 1.1 7.8E-05 32.9 -3.1 41 32-80 2-42 (71)
35 d1y02a2 g.50.1.1 (A:20-70) Rif 34.6 1.1 7.8E-05 30.6 -3.0 42 34-75 2-44 (51)
36 d1dvpa2 g.50.1.1 (A:149-220) H 34.4 7.9 0.00057 27.6 1.7 33 32-64 13-46 (72)
37 d2o35a1 a.293.1.1 (A:2-80) Hyp 32.6 8 0.00058 28.5 1.5 12 56-67 39-50 (79)
38 d1vfya_ g.50.1.1 (A:) vps27p p 32.4 11 0.00077 26.4 2.1 33 32-64 5-38 (67)
39 d2dloa1 g.39.1.3 (A:8-42) Thyr 27.5 6.1 0.00045 24.9 0.0 27 33-62 9-35 (35)
40 d1weea_ g.50.1.2 (A:) PHD fing 26.6 9.2 0.00067 26.7 0.9 47 31-78 15-66 (72)
41 d2ct7a1 g.44.1.4 (A:8-80) Ring 25.2 3.4 0.00025 29.5 -1.8 37 32-68 18-57 (73)
42 d2gmga1 a.4.5.82 (A:1-105) Hyp 24.9 8.8 0.00064 29.8 0.5 32 46-82 66-97 (105)
43 d1x4ka1 g.39.1.3 (A:35-66) Fou 23.6 24 0.0017 21.5 2.3 29 35-65 2-30 (32)
44 d2d8va1 g.43.1.1 (A:8-61) Zinc 22.6 15 0.0011 25.1 1.3 27 35-65 4-31 (54)
45 d2dasa1 g.39.1.17 (A:8-56) Zin 20.2 37 0.0027 22.5 2.8 35 31-65 12-48 (49)
46 d1wyha1 g.39.1.3 (A:35-66) Fou 20.1 32 0.0024 20.9 2.4 29 35-65 2-30 (32)
47 d2dara1 g.39.1.3 (A:53-84) PDZ 20.0 38 0.0027 20.6 2.6 30 35-66 2-31 (32)
No 1
>d1iyma_ g.44.1.1 (A:) EL5 RING-H2 domain {Rice (Oryza sativa) [TaxId: 4530]}
Probab=99.41 E-value=3.7e-14 Score=103.73 Aligned_cols=50 Identities=30% Similarity=0.807 Sum_probs=43.6
Q ss_pred CCcccccccccccCCCCeee-cccCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016632 31 CDDACSICLEEFSESDPSTV-TSCKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~v-lpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
++.+|+||++.|..++.+.. +.|+|.||..||..|++.+..||+||+.|.
T Consensus 4 d~~~C~ICl~~~~~~~~~~~l~~C~H~Fh~~Ci~~Wl~~~~~CP~CR~~i~ 54 (55)
T d1iyma_ 4 DGVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLTVV 54 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEECTTHHHHTTTTCCSCSSSCCCSC
T ss_pred CCCCCeEECccccCCCEEEEeCCCCCcccHHHHHHHHHhCCcCCCCCCEeE
Confidence 36789999999977666655 469999999999999999999999999874
No 2
>d1chca_ g.44.1.1 (A:) Immediate early protein, IEEHV {Equine herpesvirus 1 [TaxId: 10326]}
Probab=99.32 E-value=3.1e-13 Score=102.30 Aligned_cols=47 Identities=34% Similarity=0.906 Sum_probs=42.0
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
-+.|+||++.| .+++++++|+|.||..||..|++.+..||+||.++.
T Consensus 5 ~d~C~IC~~~~--~~~~~~~~C~H~Fc~~Ci~~w~~~~~~CP~CR~~i~ 51 (68)
T d1chca_ 5 AERCPICLEDP--SNYSMALPCLHAFCYVCITRWIRQNPTCPLCKVPVE 51 (68)
T ss_dssp CCCCSSCCSCC--CSCEEETTTTEEESTTHHHHHHHHSCSTTTTCCCCC
T ss_pred CCCCccCCcCc--cCCcEEeCCCCcCcHHHHHHHHHhCCcCCCCCcchH
Confidence 35699999998 456778999999999999999999999999999875
No 3
>d1fbva4 g.44.1.1 (A:356-434) CBL {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.25 E-value=2.7e-12 Score=99.97 Aligned_cols=49 Identities=24% Similarity=0.620 Sum_probs=41.8
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCCCC
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISLKD 83 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d 83 (386)
...|+||++.+. .+++++|||.||..||..|+.. ...||+||..|....
T Consensus 23 ~~~C~IC~~~~~---~~~~~~CgH~fC~~Ci~~wl~~~~~~CP~Cr~~i~~~~ 72 (79)
T d1fbva4 23 FQLCKICAENDK---DVKIEPCGHLMCTSCLTSWQESEGQGCPFCRCEIKGTE 72 (79)
T ss_dssp TTBCTTTSSSBC---CEECSSSCCEECHHHHHHHHHTTCCSCTTTCCCCCCCC
T ss_pred CCCCccCCCcCC---CeEEeCCCCeeeHHHHHHHHHHCcCcCCCCCcCccCCc
Confidence 467999999983 3778899999999999999975 568999999987654
No 4
>d1g25a_ g.44.1.1 (A:) TFIIH Mat1 subunit {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.23 E-value=3.3e-12 Score=95.87 Aligned_cols=54 Identities=24% Similarity=0.448 Sum_probs=42.8
Q ss_pred CCcccccccccccCC--CCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCCCCc
Q 016632 31 CDDACSICLEEFSES--DPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISLKDA 84 (386)
Q Consensus 31 ~d~~C~ICle~f~~~--d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d~ 84 (386)
+|..|+||++.+... ....+++|+|.||..||..|+.. ...||+||+.|...++
T Consensus 2 dd~~CpIC~~~~~~~~~~~~~~~~C~H~fc~~Ci~~~~~~~~~~CP~CR~~i~~~~~ 58 (65)
T d1g25a_ 2 DDQGCPRCKTTKYRNPSLKLMVNVCGHTLCESCVDLLFVRGAGNCPECGTPLRKSNF 58 (65)
T ss_dssp CTTCCSTTTTHHHHCSSCCEEECTTCCCEEHHHHHHHHHTTSSSCTTTCCCCSSCCC
T ss_pred CCCCCCcCCceeecCCceEEEeCccChHhhHHHHHHHhCcCcCCCCCCCcCcccccc
Confidence 478999999975322 23466799999999999999965 5679999999876553
No 5
>d2baya1 g.44.1.2 (A:1-56) Pre-mRNA splicing factor Prp19 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=99.22 E-value=1.7e-12 Score=94.87 Aligned_cols=50 Identities=14% Similarity=0.288 Sum_probs=43.3
Q ss_pred cccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCc
Q 016632 33 DACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDA 84 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~ 84 (386)
+.|+||++.| .+++..+.|||.||..||.+|++.+..||+||+++...++
T Consensus 1 l~C~Ic~~~~--~~Pv~~~~cGh~fc~~cI~~~l~~~~~CP~c~~~l~~~dL 50 (56)
T d2baya1 1 MLCAISGKVP--RRPVLSPKSRTIFEKSLLEQYVKDTGNDPITNEPLSIEEI 50 (56)
T ss_dssp CCCTTTCSCC--SSEEEETTTTEEEEHHHHHHHHHHHSBCTTTCCBCCGGGC
T ss_pred CCCccCCchH--HhcCccCCCCCcccHHHHHHHHhhccCCCccCCcCCHHhc
Confidence 4799999999 4555555799999999999999999999999999987664
No 6
>d1v87a_ g.44.1.1 (A:) Deltex protein 2 RING-H2 domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.19 E-value=7.1e-12 Score=102.99 Aligned_cols=56 Identities=30% Similarity=0.643 Sum_probs=43.4
Q ss_pred CCCCCCcccccccccccC---------------CCCeeecccCCcccHHHHHHHHhcC-----CCCCCCcccCCCC
Q 016632 27 IQDSCDDACSICLEEFSE---------------SDPSTVTSCKHEFHLQCVLEWCQRS-----SQCPMCWQPISLK 82 (386)
Q Consensus 27 iqde~d~~C~ICle~f~~---------------~d~~~vlpCgH~FC~~CI~~Wlq~~-----~sCP~CR~~i~~~ 82 (386)
++...+..|+||++.|.. ...+.+++|+|.||..||..|++.. .+||+||..+..+
T Consensus 20 ~~~~~~~~C~IC~e~l~~~~~~~~~~~~~~~~~~~~~~~~~CgH~FH~~Ci~~Wl~~~~~~~~~~CP~CR~~~~~~ 95 (114)
T d1v87a_ 20 LKVAPEEDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFHLLCLLAMYCNGNKDGSLQCPSCKTIYGEK 95 (114)
T ss_dssp CSSCCSCEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEECHHHHHHHHHHTCCSSCCBCTTTCCBSSSC
T ss_pred hcccccccccchhheecccccccccccccccccccceEECCCCChhhHHHHHHHHHhcCcCCCCccccccchhccC
Confidence 344457789999998742 1234668999999999999999753 4799999988654
No 7
>d1rmda2 g.44.1.1 (A:1-86) V(D)J recombination activating protein 1 (RAG1), dimerization domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.18 E-value=4.2e-12 Score=100.85 Aligned_cols=51 Identities=33% Similarity=0.628 Sum_probs=43.0
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCCCCcc
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISLKDAT 85 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d~~ 85 (386)
+..|+||++.|.+ +++++|||.||..||..|++. ...||+||.++...++.
T Consensus 23 ~l~C~IC~~~~~~---pv~~~CgH~FC~~Ci~~~~~~~~~~CP~Cr~p~~~~~l~ 74 (86)
T d1rmda2 23 SISCQICEHILAD---PVETSCKHLFCRICILRCLKVMGSYCPSCRYPCFPTDLE 74 (86)
T ss_dssp HTBCTTTCSBCSS---EEECTTSCEEEHHHHHHHHHHTCSBCTTTCCBCCGGGCB
T ss_pred CcCCccCCcchhc---ceecCCCChhhHHHHHHHHhhCCCcCcccCCCCChhhcc
Confidence 5789999999833 677899999999999999975 45799999998866543
No 8
>d1jm7a_ g.44.1.1 (A:) brca1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.18 E-value=1.6e-12 Score=105.61 Aligned_cols=50 Identities=34% Similarity=0.701 Sum_probs=41.6
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcC---CCCCCCcccCCCCCc
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS---SQCPMCWQPISLKDA 84 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~---~sCP~CR~~i~~~d~ 84 (386)
.+.|+||++.| .+ ++.++|||.||..||..|+... ..||+||..+...++
T Consensus 21 ~l~CpIC~~~~--~~-pv~~~CgH~fC~~Ci~~~~~~~~~~~~CP~Cr~~~~~~~l 73 (103)
T d1jm7a_ 21 ILECPICLELI--KE-PVSTKCDHIFCKFCMLKLLNQKKGPSQCPLCKNDITKRSL 73 (103)
T ss_dssp HTSCSSSCCCC--SS-CCBCTTSCCCCSHHHHHHHHSSSSSCCCTTTSCCCCTTTC
T ss_pred CcCCCccCchh--CC-eEEcCCCCchhhHHHHHHHHHCCCCCcCcCCCCcCChhhC
Confidence 67899999999 34 4557999999999999999764 479999999876553
No 9
>d1ur6b_ g.44.1.1 (B:) Not-4 N-terminal RING finger domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=4.4e-12 Score=91.31 Aligned_cols=49 Identities=20% Similarity=0.459 Sum_probs=40.3
Q ss_pred cccccccccccCCCC-eeecccCCcccHHHHHHHHhc-CCCCCCCcccCCC
Q 016632 33 DACSICLEEFSESDP-STVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISL 81 (386)
Q Consensus 33 ~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~ 81 (386)
++|+||++.|...+. +.+++|+|.||..||..|++. +..||+||+++..
T Consensus 1 leCpICl~~~~~~~~~~~~~~CgH~~c~~C~~~w~~~~~~~CP~CR~~~~~ 51 (52)
T d1ur6b_ 1 VECPLCMEPLEIDDINFFPCTCGYQICRFCWHRIRTDENGLCPACRKPYPE 51 (52)
T ss_dssp CEETTTTEECCGGGTTCCSSSSSCCCCHHHHHHHTTTSCCBCTTTCCBCSC
T ss_pred CCCcCCChhhhCCCceEEecCCCCccchHHHHHHHhhcCCCCCccCCcCCC
Confidence 479999999865443 455799999999999999986 4579999998864
No 10
>d3dplr1 g.44.1.1 (R:19-106) RIGG-box protein 1 (RBX1) of SCF ubiquitin ligase complex {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=8.3e-12 Score=98.83 Aligned_cols=53 Identities=23% Similarity=0.609 Sum_probs=43.1
Q ss_pred CCCcccccccccccCCC---------------CeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016632 30 SCDDACSICLEEFSESD---------------PSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d---------------~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
..++.|+||++.+.... .+.+++|+|.||..||..|++.+.+||+||.++..+
T Consensus 19 ~~~d~C~IC~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~FH~~Ci~~Wl~~~~~CP~CR~~~~~~ 86 (88)
T d3dplr1 19 IVVDNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQ 86 (88)
T ss_dssp SCSCCCSSSCSCTTSCCTTHHHHTTCC---CCCEEEETTSCEEEHHHHHHHHTTCSBCSSSCSBCCEE
T ss_pred CCCCcCEEccchhhCccccccccccccccccCCeEEccccCcccHHHHHHHHHHCCcCCCCCCccccc
Confidence 34667999998874321 256689999999999999999999999999988643
No 11
>d1jm7b_ g.44.1.1 (B:) bard1 RING domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.17 E-value=2.6e-12 Score=103.18 Aligned_cols=58 Identities=26% Similarity=0.637 Sum_probs=47.9
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHH
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAV 93 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~v 93 (386)
++.|+||++.| .+++++++|+|.||..||..|+. ..||.||..+...++..+..+..+
T Consensus 22 ~l~C~IC~~~~--~~pv~~~~CgH~fC~~Ci~~~~~--~~CP~Cr~~~~~~~l~~n~~l~~l 79 (97)
T d1jm7b_ 22 LLRCSRCTNIL--REPVCLGGCEHIFCSNCVSDCIG--TGCPVCYTPAWIQDLKINRQLDSM 79 (97)
T ss_dssp TTSCSSSCSCC--SSCBCCCSSSCCBCTTTGGGGTT--TBCSSSCCBCSCSSCCCCHHHHHH
T ss_pred cCCCccCCchh--hcCceeCCCCCchhHHHHHHHHh--ccccccCCcCchhhCcccHHHHHH
Confidence 67999999999 56666679999999999999984 459999999988877766555543
No 12
>d1t1ha_ g.44.1.2 (A:) E3 ubiquitin ligase PUB14 {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=99.14 E-value=1.5e-11 Score=94.88 Aligned_cols=61 Identities=18% Similarity=0.366 Sum_probs=49.1
Q ss_pred CCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC-CCCCCCcccCCCCCcchHHHHHHH
Q 016632 30 SCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS-SQCPMCWQPISLKDATSQELLEAV 93 (386)
Q Consensus 30 e~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~-~sCP~CR~~i~~~d~~~~~lle~v 93 (386)
.+++.|+||++.| .+ +++++|||.||..||..|+... ..||.|+..+...++.++..+..+
T Consensus 6 P~~l~CpIc~~~m--~d-PV~~~cgh~fc~~ci~~~~~~~~~~cP~~~~~l~~~~l~pN~~L~~~ 67 (78)
T d1t1ha_ 6 PEYFRCPISLELM--KD-PVIVSTGQTYERSSIQKWLDAGHKTCPKSQETLLHAGLTPNYVLKSL 67 (78)
T ss_dssp SSSSSCTTTSCCC--SS-EEEETTTEEEEHHHHHHHHTTTCCBCTTTCCBCSSCCCEECTTTHHH
T ss_pred CccCCCcCcCchh--hC-ceEccCCCcchHHHHHHHHHHCCCCCCcccccCCcccccchHHHHHH
Confidence 4589999999999 34 5567999999999999999764 579999999988776665444433
No 13
>d2c2la2 g.44.1.2 (A:225-304) STIP1 homology and U box-containing protein 1, STUB1 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=99.14 E-value=1.5e-11 Score=95.35 Aligned_cols=62 Identities=15% Similarity=0.159 Sum_probs=51.0
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhc-CCCCCCCcccCCCCCcchHHHHHHHHH
Q 016632 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR-SSQCPMCWQPISLKDATSQELLEAVEQ 95 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~-~~sCP~CR~~i~~~d~~~~~lle~ve~ 95 (386)
+++.|+||++.| .+ +++++|||.||..||..|+.. ...||.|+..+...++.++..+.....
T Consensus 6 ~~l~CpIc~~l~--~d-Pv~~~cGhtfc~~ci~~~l~~~~~~cP~c~~~l~~~~l~pN~~L~~~I~ 68 (80)
T d2c2la2 6 DYLCGKISFELM--RE-PCITPSGITYDRKDIEEHLQRVGHFNPVTRSPLTQEQLIPNLAMKEVID 68 (80)
T ss_dssp STTBCTTTCSBC--SS-EEECSSCCEEETTHHHHHHHHTCSSCTTTCCCCCGGGCEECHHHHHHHH
T ss_pred ccccCcCcCchh--hh-hcccCCcCeecHHHHHHHHhcCCccCCCccccccccccccHHHHHHHHH
Confidence 589999999999 34 567899999999999999975 567999999998877777666555443
No 14
>d1wgma_ g.44.1.2 (A:) Ubiquitin conjugation factor E4A {Human (Homo sapiens) [TaxId: 9606]}
Probab=99.05 E-value=9.6e-11 Score=94.61 Aligned_cols=63 Identities=11% Similarity=0.073 Sum_probs=51.5
Q ss_pred CCcccccccccccCCCCeeecccC-CcccHHHHHHHHhcCCCCCCCcccCCCCCcchHHHHHHHHHH
Q 016632 31 CDDACSICLEEFSESDPSTVTSCK-HEFHLQCVLEWCQRSSQCPMCWQPISLKDATSQELLEAVEQE 96 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCg-H~FC~~CI~~Wlq~~~sCP~CR~~i~~~d~~~~~lle~ve~e 96 (386)
+++.||||++.| .+ +++++|+ |.||..||..|+..+..||+|+.++...++.++..+.....+
T Consensus 21 ~~f~CPI~~~lm--~d-PV~~~~~~~ty~r~~I~~~l~~~~~~P~~~~~l~~~~L~pN~~Lr~~I~~ 84 (98)
T d1wgma_ 21 DEFLDPIMSTLM--CD-PVVLPSSRVTVDRSTIARHLLSDQTDPFNRSPLTMDQIRPNTELKEKIQR 84 (98)
T ss_dssp TTTBCTTTCSBC--SS-EEECTTTCCEEEHHHHHHHTTTSCBCTTTCSBCCTTTSEECHHHHHHHHH
T ss_pred HHhCCcCchhHH--HH-HHhcccccchhhHHHHHHHHHhcCCcccccccccchhhcchHHHHHHHHH
Confidence 379999999999 44 5556665 589999999999999999999999999888877766554443
No 15
>d1bora_ g.44.1.1 (A:) Acute promyelocytic leukaemia proto-oncoprotein PML {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.99 E-value=3.1e-11 Score=88.35 Aligned_cols=47 Identities=26% Similarity=0.489 Sum_probs=38.7
Q ss_pred CCcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCCC
Q 016632 31 CDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLKD 83 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~d 83 (386)
+.++|+||++.|.+ +++++|+|.||..||..| ...||+||+.+....
T Consensus 5 ~~l~C~IC~~~~~~---p~~lpCgH~fC~~Ci~~~---~~~CP~Cr~~~~~~~ 51 (56)
T d1bora_ 5 QFLRCQQCQAEAKC---PKLLPCLHTLCSGCLEAS---GMQCPICQAPWPLGA 51 (56)
T ss_dssp CCSSCSSSCSSCBC---CSCSTTSCCSBTTTCSSS---SSSCSSCCSSSSCCS
T ss_pred CCCCCcccCcccCC---CEEecCCCHHhHHHHHcC---CCcCcCCCCcccCCC
Confidence 35799999999833 567799999999999765 668999999987643
No 16
>d1vyxa_ g.44.1.3 (A:) IE1B protein (ORF K3), N-terminal domain {Kaposi's sarcoma-associated herpesvirus, KSHV, HHV8 [TaxId: 37296]}
Probab=98.92 E-value=3.3e-10 Score=83.20 Aligned_cols=55 Identities=22% Similarity=0.440 Sum_probs=40.7
Q ss_pred CCCCCCcccccccccccCCCC--eeecccCCcccHHHHHHHHhc--CCCCCCCcccCCC
Q 016632 27 IQDSCDDACSICLEEFSESDP--STVTSCKHEFHLQCVLEWCQR--SSQCPMCWQPISL 81 (386)
Q Consensus 27 iqde~d~~C~ICle~f~~~d~--~~vlpCgH~FC~~CI~~Wlq~--~~sCP~CR~~i~~ 81 (386)
++|+++..|.||++.+..... .....|+|.||..||..|+.. +.+||+||+++..
T Consensus 1 ~eded~~~C~IC~~~~~~~~~~~c~c~~c~h~~H~~Cl~~W~~~~~~~~CP~Cr~~~~~ 59 (60)
T d1vyxa_ 1 MEDEDVPVCWICNEELGNERFRACGCTGELENVHRSCLSTWLTISRNTACQICGVVYNT 59 (60)
T ss_dssp CTTCSCCEETTTTEECSCCCCCSCCCSSGGGSCCHHHHHHHHHHHTCSBCTTTCCBCCC
T ss_pred CCCCCCCCCccCCccCCCceeEecccCCCCCEEcHHHHHHHHhhCCCCCCcccCCeeec
Confidence 467788999999998743211 112334699999999999954 5689999998764
No 17
>d1wima_ g.44.1.1 (A:) UbcM4-interacting protein 4 (KIAA0161) {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.25 E-value=1.5e-07 Score=74.00 Aligned_cols=46 Identities=22% Similarity=0.577 Sum_probs=36.3
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcC--------CCCCCCcc
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS--------SQCPMCWQ 77 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~--------~sCP~CR~ 77 (386)
...|+||++.+...+.+.+++|+|.||..||..|+... -.||.|..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~C~H~fC~~Cl~~~~~~~i~~~~~~~i~CP~~~C 58 (94)
T d1wima_ 5 SSGCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAAC 58 (94)
T ss_dssp BCCCSSSCCCCBGGGEEEETTTTEEEEHHHHHHHHHHHHHHCSCCCEECSCTTC
T ss_pred CCcCccCCCcccCCceEEECCCCCEeCCcCHHHHHHHHHhcCCccccCCcCCCC
Confidence 56899999998654556677999999999999999631 14998654
No 18
>d1fp0a1 g.50.1.2 (A:19-88) Nuclear corepressor KAP-1 (TIF-1beta) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.66 E-value=0.17 Score=36.63 Aligned_cols=49 Identities=27% Similarity=0.574 Sum_probs=33.5
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhcC----CCCCCCcccCC
Q 016632 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCWQPIS 80 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR~~i~ 80 (386)
|.....|.||.+. ++-+.--.|...||..|+...+... -.||.|+....
T Consensus 4 Dd~c~~C~~C~~~---~~ll~Cd~C~~~~H~~C~~p~l~~~p~~~W~C~~C~~~~~ 56 (70)
T d1fp0a1 4 DDSATICRVCQKP---GDLVMCNQCEFCFHLDCHLPALQDVPGEEWSCSLCHVLPD 56 (70)
T ss_dssp SSSSSCCSSSCSS---SCCEECTTSSCEECTTSSSTTCCCCCSSSCCCCSCCCCCS
T ss_pred CCCCCCCCCCCCc---CEEEECCCCChhhccccCCCCcCcCCCCCEECcCCcCcCc
Confidence 3456678888754 3334446789999999998766443 35999965543
No 19
>d2cs3a1 g.44.1.3 (A:8-87) Protein c14orf4 (KIAA1865) {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.41 E-value=0.7 Score=34.03 Aligned_cols=41 Identities=24% Similarity=0.432 Sum_probs=28.7
Q ss_pred CCCCCcccccccccccCCCCeeecc-cCCcccHHHHHHHHhc
Q 016632 28 QDSCDDACSICLEEFSESDPSTVTS-CKHEFHLQCVLEWCQR 68 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlp-CgH~FC~~CI~~Wlq~ 68 (386)
.....+.|.||.+-+.+..-+.... =.|.||+.|-...++.
T Consensus 4 ~~~~~l~CtlC~erLEdtHFVQCPsv~~HkFCFpCsr~sik~ 45 (80)
T d2cs3a1 4 ANSGPLCCTICHERLEDTHFVQCPSVPSHKFCFPCSRESIKA 45 (80)
T ss_dssp CSCCSCCCSSSCSCCSSTTSEECSSCSSCEECHHHHHHHHHH
T ss_pred CCCCceeeeeehhhhcCCceEeCCCCcCCceeccccHHHHHh
Confidence 3445689999999995532222211 2599999999999875
No 20
>d1weoa_ g.44.1.1 (A:) Cellulose synthase A catalytic subunit 7, IRX3 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=81.65 E-value=1.1 Score=33.99 Aligned_cols=54 Identities=15% Similarity=0.350 Sum_probs=37.9
Q ss_pred CCCCCCcccccccccccCCC--C--eeecccCCcccHHHHHH-HHhcCCCCCCCcccCC
Q 016632 27 IQDSCDDACSICLEEFSESD--P--STVTSCKHEFHLQCVLE-WCQRSSQCPMCWQPIS 80 (386)
Q Consensus 27 iqde~d~~C~ICle~f~~~d--~--~~vlpCgH~FC~~CI~~-Wlq~~~sCP~CR~~i~ 80 (386)
++......|.||-+.+.... . +..-.|.--.|..|..- +...++.||.|+..+.
T Consensus 11 ~~~~~~q~CqiCGd~VG~~~~Ge~FVAC~eC~FPvCrpCyEYErkeG~q~CpqCkt~Yk 69 (93)
T d1weoa_ 11 LKNLDGQFCEICGDQIGLTVEGDLFVACNECGFPACRPCYEYERREGTQNCPQCKTRYK 69 (93)
T ss_dssp CSCCSSCBCSSSCCBCCBCSSSSBCCSCSSSCCCCCHHHHHHHHHTSCSSCTTTCCCCC
T ss_pred hhhcccchhhhcccccccCCCCCEEEEecccCCccchHHHHHHHhccCccCcccCChhh
Confidence 34555678999999874221 1 33457888999999864 3345788999988765
No 21
>d1f62a_ g.50.1.2 (A:) Williams-Beuren syndrome transcription factor, WSTF {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.87 E-value=0.33 Score=32.66 Aligned_cols=44 Identities=25% Similarity=0.578 Sum_probs=29.2
Q ss_pred ccccccccccCCCCeeecccCCcccHHHHHHHHhcC----CCCCCCcc
Q 016632 34 ACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRS----SQCPMCWQ 77 (386)
Q Consensus 34 ~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~----~sCP~CR~ 77 (386)
.|.||...-....-+.--.|...||..|+..-+... -.||.|+.
T Consensus 2 ~C~vC~~~~~~~~~i~Cd~C~~~~H~~C~~p~~~~~p~~~W~C~~C~~ 49 (51)
T d1f62a_ 2 RCKVCRKKGEDDKLILCDECNKAFHLFCLRPALYEVPDGEWQCPACQP 49 (51)
T ss_dssp CCTTTCCSSCCSCCEECTTTCCEECHHHHCTTCCSCCSSCCSCTTTSC
T ss_pred CCcCcCCCCCCCCEEEcCCCCCCCCCCCCCCCCCcCCCCCEECcCCcC
Confidence 478887654222223335788999999998765432 35999975
No 22
>d1mm2a_ g.50.1.2 (A:) Mi2-beta (CHD4) {Human (Homo sapiens) [TaxId: 9606]}
Probab=80.78 E-value=0.13 Score=36.29 Aligned_cols=48 Identities=21% Similarity=0.567 Sum_probs=32.8
Q ss_pred CCCCCcccccccccccCCCCeeecccCCcccHHHHHHHHhc----CCCCCCCccc
Q 016632 28 QDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQR----SSQCPMCWQP 78 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~----~~sCP~CR~~ 78 (386)
.|..+..|.||.+. ++-+.--.|.-.||..|+...+.. .-.||.|+..
T Consensus 5 ~d~~~~~C~~C~~~---g~lv~Cd~C~~~~H~~C~~~~~~~~~~~~W~C~~C~~~ 56 (61)
T d1mm2a_ 5 SDHHMEFCRVCKDG---GELLCCDTCPSSYHIHCLNPPLPEIPNGEWLCPRCTCP 56 (61)
T ss_dssp SCSSCSSCTTTCCC---SSCBCCSSSCCCBCSSSSSSCCSSCCSSCCCCTTTTTT
T ss_pred ccCCcCCCcCCCCC---CeEEEeCCCCccCchhhcCCCcCcCCCCcEECCCCcCc
Confidence 34556789999874 333344578899999998755443 3469999654
No 23
>d1wema_ g.50.1.2 (A:) Death associated transcription factor 1, Datf1 (DIO-1) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=75.76 E-value=0.75 Score=33.07 Aligned_cols=50 Identities=24% Similarity=0.379 Sum_probs=30.6
Q ss_pred CCCCCcccccccccccCCCCeeecccCCcccHHHHH------HH---HhcCCCCCCCccc
Q 016632 28 QDSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVL------EW---CQRSSQCPMCWQP 78 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~------~W---lq~~~sCP~CR~~ 78 (386)
.|.+...| ||........-+.--.|.-.||..|+. .. ......||.|+..
T Consensus 12 ~d~~~~~C-iC~~~~~~~~mi~Cd~C~~w~H~~Cvg~~~~~~~~~~~~~~~w~C~~C~~~ 70 (76)
T d1wema_ 12 YDPNALYC-ICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 70 (76)
T ss_dssp CCTTCCCS-TTCCCCCSSCEEECSSSCCEEEHHHHSCCHHHHHHHHHHTCCCCCHHHHHH
T ss_pred cCCCcCEE-ECCCccCCCeEEEECCCCCcCCccccCCCcccccccCCCCCcEECCCCcCc
Confidence 34456678 898765322212335688899999972 11 1234789999644
No 24
>d1wila_ g.50.1.3 (A:) Hypothetical protein KIAA1045 {Human (Homo sapiens) [TaxId: 9606]}
Probab=74.13 E-value=1.1 Score=33.89 Aligned_cols=36 Identities=22% Similarity=0.535 Sum_probs=24.9
Q ss_pred CCCCcccccccccccCCCCeeecccCCcccHHHHHHH
Q 016632 29 DSCDDACSICLEEFSESDPSTVTSCKHEFHLQCVLEW 65 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~W 65 (386)
-..|..|.|| +.|......-.--|+-.||..|+.+.
T Consensus 12 v~~D~mC~vC-~v~t~~~l~pCRvCtRv~H~~CL~r~ 47 (89)
T d1wila_ 12 VVNDEMCDVC-EVWTAESLFPCRVCTRVFHDGCLRRM 47 (89)
T ss_dssp CCCSCCCTTT-CCCCSSCCSSCSSSSSCCCHHHHHHH
T ss_pred CCcCcccccc-CcccccceecceeecchhhHHHHHHh
Confidence 3458899999 66643222222347789999999987
No 25
>d1wesa_ g.50.1.2 (A:) PHD Inhibitor of growth protein 2, Ing2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=73.56 E-value=0.75 Score=33.40 Aligned_cols=47 Identities=23% Similarity=0.456 Sum_probs=27.8
Q ss_pred CCCCCCcccccccccccCCCCeeecc---cC-CcccHHHHHHHHhc----CCCCCCCccc
Q 016632 27 IQDSCDDACSICLEEFSESDPSTVTS---CK-HEFHLQCVLEWCQR----SSQCPMCWQP 78 (386)
Q Consensus 27 iqde~d~~C~ICle~f~~~d~~~vlp---Cg-H~FC~~CI~~Wlq~----~~sCP~CR~~ 78 (386)
++.+++..| ||.... ........ |. ..||..|+. +.. ...||.|+..
T Consensus 11 ~d~~e~~~C-iC~~~~--~~~~i~c~~~~C~~~wfH~~Cvg--l~~~p~~~w~C~~C~~~ 65 (71)
T d1wesa_ 11 IDPNEPTYC-LCNQVS--YGEMIGCDNEQCPIEWFHFSCVS--LTYKPKGKWYCPKCRGD 65 (71)
T ss_dssp CCSSSCCCS-TTCCCC--CSSEECCSCTTCSCCCEETTTTT--CSSCCSSCCCCTTTSSC
T ss_pred cCCCCCCEE-EeCCCC--CCCEEEEECCCCCCcCccCccCC--CCcCCCCcEECcCCccc
Confidence 444445556 999764 22233322 43 579999984 222 3479999754
No 26
>d1z60a1 g.49.1.2 (A:328-386) TFIIH p44 subunit cysteine-rich domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=73.32 E-value=0.6 Score=33.11 Aligned_cols=44 Identities=20% Similarity=0.517 Sum_probs=30.4
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCC
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMC 75 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~C 75 (386)
...|.-|...|.+...-....|++.||.+|=.-.-+.-..||-|
T Consensus 15 ~~~C~gC~~~l~~~~~y~C~~C~~~FC~dCD~fiHe~lh~CpgC 58 (59)
T d1z60a1 15 ERFCYGCQGELKDQHVYVCAVCQNVFCVDCDVFVHDSLHSCPGC 58 (59)
T ss_dssp CCEETTTTEECTTSEEECCTTTTCCBCHHHHHTTTTTSCSSSTT
T ss_pred CCCccCCCCcCCCCceEECcCCCCccccccchhhhhhhcCCCCC
Confidence 56799999888443223357899999999943322334679988
No 27
>d1wewa_ g.50.1.2 (A:) Sumoylation ligase E3, SIZ1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=66.05 E-value=1.9 Score=31.29 Aligned_cols=49 Identities=22% Similarity=0.434 Sum_probs=31.1
Q ss_pred CCCCCcccccccccccCCCCeeec---ccCCcccHHHHHH----HHh-----cCCCCCCCccc
Q 016632 28 QDSCDDACSICLEEFSESDPSTVT---SCKHEFHLQCVLE----WCQ-----RSSQCPMCWQP 78 (386)
Q Consensus 28 qde~d~~C~ICle~f~~~d~~~vl---pCgH~FC~~CI~~----Wlq-----~~~sCP~CR~~ 78 (386)
+++++..| ||...... ...+.. .|...||..|+.- +.. ....||.|+..
T Consensus 12 ~~~~~~~C-~C~~~~~~-~~~i~c~c~~C~~W~H~~Cvgi~~~~~~~~~~~~~~~~C~~C~~~ 72 (78)
T d1wewa_ 12 QPEIKVRC-VCGNSLET-DSMIQCEDPRCHVWQHVGCVILPDKPMDGNPPLPESFYCEICRLT 72 (78)
T ss_dssp SCCCCCCC-SSCCCCCC-SCEEECSSTTTCCEEEHHHHSCCCTTTCSCSCSCSSCCCHHHHHC
T ss_pred CCCCccEe-ECCCccCC-CcEEEEeCCCCCcCCCccccCccccccccccCCCCEEECCCCcCc
Confidence 44455678 99987633 334444 4899999999732 101 13679999654
No 28
>d1wepa_ g.50.1.2 (A:) PHD finger protein 8 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=59.27 E-value=9.6 Score=27.32 Aligned_cols=47 Identities=19% Similarity=0.333 Sum_probs=29.7
Q ss_pred cccccccccccCCCCe-eecccCCcccHHHHHH--HH-h--cCCCCCCCcccC
Q 016632 33 DACSICLEEFSESDPS-TVTSCKHEFHLQCVLE--WC-Q--RSSQCPMCWQPI 79 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~-~vlpCgH~FC~~CI~~--Wl-q--~~~sCP~CR~~i 79 (386)
..|-||...+...... ..-.|.-.||..|+.- .. . ....||.|+...
T Consensus 12 pv~CiC~~~~~~~~~mI~Cd~C~~W~H~~C~g~~~~~~~~~~~~~C~~C~~~~ 64 (79)
T d1wepa_ 12 PVYCLCRQPYNVNHFMIECGLCQDWFHGSCVGIEEENAVDIDIYHCPDCEAVF 64 (79)
T ss_dssp CCCSTTSCSCCSSSCEEEBTTTCCEEEHHHHTCCHHHHTTCSBBCCTTTTTTS
T ss_pred CeEeECCCccCCCCcEEECCCCCCcEeccccCcchhcCCCCCEEECccCcCCc
Confidence 3444999876433332 2357889999999842 21 1 236899997654
No 29
>d1weva_ g.50.1.2 (A:) PHD finger protein 22 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=53.99 E-value=0.97 Score=33.49 Aligned_cols=47 Identities=19% Similarity=0.391 Sum_probs=29.5
Q ss_pred CcccccccccccCCC-Ce-eecccCCcccHHHHHHHH-----h---cCCCCCCCccc
Q 016632 32 DDACSICLEEFSESD-PS-TVTSCKHEFHLQCVLEWC-----Q---RSSQCPMCWQP 78 (386)
Q Consensus 32 d~~C~ICle~f~~~d-~~-~vlpCgH~FC~~CI~~Wl-----q---~~~sCP~CR~~ 78 (386)
...|.||........ .+ ..-.|...||..|+...+ . ..-.||.|...
T Consensus 16 ~~~C~iC~~~~~~~~~~~v~Cd~C~~~~H~~C~~p~~~~~~~~~~~~~W~C~~C~~~ 72 (88)
T d1weva_ 16 GLACVVCRQMTVASGNQLVECQECHNLYHQDCHKPQVTDKEVNDPRLVWYCARCTRQ 72 (88)
T ss_dssp CCSCSSSCCCCCCTTCCEEECSSSCCEEETTTSSSCCCHHHHHCTTCCCCCHHHHHH
T ss_pred cCCccCCCCccCCCCCeEEEcCCCCCccccccCCCcccccccccCCCeEECcccCch
Confidence 567999987543222 22 234688899999976332 1 13469999543
No 30
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=48.83 E-value=3.8 Score=32.16 Aligned_cols=36 Identities=17% Similarity=0.436 Sum_probs=25.7
Q ss_pred CCCCCCcccccccccccCC-CC-eeecccCCcccHHHH
Q 016632 27 IQDSCDDACSICLEEFSES-DP-STVTSCKHEFHLQCV 62 (386)
Q Consensus 27 iqde~d~~C~ICle~f~~~-d~-~~vlpCgH~FC~~CI 62 (386)
..+.....|.+|...|..- .. .....|++.||..|-
T Consensus 43 ~~~~~~~~C~~C~~~f~~~~~~~~~C~~C~~~~C~~C~ 80 (124)
T d1zbdb_ 43 VAGDGVNRCILCGEQLGMLGSASVVCEDCKKNVCTKCG 80 (124)
T ss_dssp CCSCSSSBCSSSCCBCSTTSCCEEECTTTCCEEETTSE
T ss_pred hhccCCCcCcccCCcccCCCCCCCcCccCCcccccCCC
Confidence 3444567899999987531 22 346789999999994
No 31
>d1we9a_ g.50.1.2 (A:) PHD finger protein At5g26210 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=48.78 E-value=2.9 Score=28.86 Aligned_cols=48 Identities=23% Similarity=0.508 Sum_probs=32.5
Q ss_pred CCcccccccccccCCCCe-eecccCCcccHHHHHHHH---h--cCCCCCCCccc
Q 016632 31 CDDACSICLEEFSESDPS-TVTSCKHEFHLQCVLEWC---Q--RSSQCPMCWQP 78 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~-~vlpCgH~FC~~CI~~Wl---q--~~~sCP~CR~~ 78 (386)
.+..|.||.....+.+.. .--.|...||..|+..-. . ....||.|+..
T Consensus 5 ~~~~C~~C~~~~~~~~~~I~Cd~C~~w~H~~C~~~~~~~~~~~~~w~C~~C~~~ 58 (64)
T d1we9a_ 5 SSGQCGACGESYAADEFWICCDLCEMWFHGKCVKITPARAEHIKQYKCPSCSNK 58 (64)
T ss_dssp SCCCCSSSCCCCCSSSCEEECSSSCCEEETTTTTCCTTGGGGCSSCCCHHHHTT
T ss_pred CCCcCcCcCCCCCCCCCEEEcCCCCccCCcccCCcChHHCCCCCeEECcCCcCc
Confidence 366899999877444332 346789999999985321 1 24579999653
No 32
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=40.42 E-value=7.3 Score=27.07 Aligned_cols=35 Identities=23% Similarity=0.439 Sum_probs=25.1
Q ss_pred CCCCcccccccccccCCC-CeeecccCCcccHHHHH
Q 016632 29 DSCDDACSICLEEFSESD-PSTVTSCKHEFHLQCVL 63 (386)
Q Consensus 29 de~d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~ 63 (386)
|++-..|.+|...|.... ...--.||+.||..|..
T Consensus 5 d~~~~~C~~C~~~F~~~~rrHHCR~CG~v~C~~Cs~ 40 (64)
T d1joca1 5 DNEVQNCMACGKGFSVTVRRHHCRQCGNIFCAECSA 40 (64)
T ss_dssp GGGCCBCTTTCCBCCSSSCCEECTTTCCEECGGGSC
T ss_pred cccCCcCcCcCCcccCCccccchhhhCCeecccccC
Confidence 445567999999885422 23447899999999953
No 33
>d1v6ga2 g.39.1.3 (A:42-81) Actin-binding LIM protein 2, abLIM2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=39.85 E-value=9 Score=24.49 Aligned_cols=30 Identities=27% Similarity=0.492 Sum_probs=21.9
Q ss_pred cccccccccccCCCCeeecccCCcccHHHHH
Q 016632 33 DACSICLEEFSESDPSTVTSCKHEFHLQCVL 63 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~ 63 (386)
..|.+|...|-.+|.++. .=+.-.|..|..
T Consensus 1 FvC~vCr~pFP~GDRVTF-nGKeC~CQ~Cs~ 30 (40)
T d1v6ga2 1 FVCAVCRLPFPPGDRVTF-NGKECMCQKCSL 30 (40)
T ss_dssp SSCSSSCCCCCSSSCEEE-ETTEEEEHHHHS
T ss_pred CcccccCCCCCCCCeEEE-cCceeehhhcCC
Confidence 369999999988777665 344567777763
No 34
>d2jnea1 g.41.18.1 (A:1-71) Hypothetical protein YfgJ {Escherichia coli [TaxId: 562]}
Probab=35.11 E-value=1.1 Score=32.86 Aligned_cols=41 Identities=22% Similarity=0.470 Sum_probs=26.1
Q ss_pred CcccccccccccCCCCeeecccCCcccHHHHHHHHhcCCCCCCCcccCC
Q 016632 32 DDACSICLEEFSESDPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPIS 80 (386)
Q Consensus 32 d~~C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~ 80 (386)
+..||.|...+... =+|.+|..|-.. ++....||-|.+++.
T Consensus 2 ~~~CP~C~~eL~~~-------~~~~~C~~C~~~-~~~~a~CPdC~~~Le 42 (71)
T d2jnea1 2 ELHCPQCQHVLDQD-------NGHARCRSCGEF-IEMKALCPDCHQPLQ 42 (71)
T ss_dssp CCBCSSSCSBEEEE-------TTEEEETTTCCE-EEEEEECTTTCSBCE
T ss_pred CCcCCCccCccccc-------CCCEehhhhhhh-heeEEeCCccccHHH
Confidence 56899999997331 146666666322 123456999988764
No 35
>d1y02a2 g.50.1.1 (A:20-70) Rififylin (FYVE-RING finger protein Sakura) {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.64 E-value=1.1 Score=30.57 Aligned_cols=42 Identities=24% Similarity=0.650 Sum_probs=25.9
Q ss_pred ccccccccccCCC-CeeecccCCcccHHHHHHHHhcCCCCCCC
Q 016632 34 ACSICLEEFSESD-PSTVTSCKHEFHLQCVLEWCQRSSQCPMC 75 (386)
Q Consensus 34 ~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~Wlq~~~sCP~C 75 (386)
.|.+|...|.... ...-..||..||..|..........|..|
T Consensus 2 ~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~~~~~~RvC~~C 44 (51)
T d1y02a2 2 SCKSCGAHFANTARKQTCLDCKKNFCMTCSSQVGNGPRLCLLC 44 (51)
T ss_dssp CCTTTCCCCSSGGGCEECTTTCCEECGGGEEC----CCEEHHH
T ss_pred CccccCCcccCCccCcccccCCcccCccccCCCCCCCeECHhH
Confidence 5888888884322 13346899999999975543334456666
No 36
>d1dvpa2 g.50.1.1 (A:149-220) Hrs {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=34.36 E-value=7.9 Score=27.60 Aligned_cols=33 Identities=24% Similarity=0.535 Sum_probs=24.0
Q ss_pred CcccccccccccCCC-CeeecccCCcccHHHHHH
Q 016632 32 DDACSICLEEFSESD-PSTVTSCKHEFHLQCVLE 64 (386)
Q Consensus 32 d~~C~ICle~f~~~d-~~~vlpCgH~FC~~CI~~ 64 (386)
+..|.+|...|.... ...--.||+.||..|...
T Consensus 13 ~~~C~~C~~~F~~~~rrhhCr~CG~~~C~~C~~~ 46 (72)
T d1dvpa2 13 GRVCHRCRVEFTFTNRKHHCRNCGQVFCGQCTAK 46 (72)
T ss_dssp CSBCTTTCCBCCSSSCCEECTTTCCEECSTTSCE
T ss_pred CCccccCCCcccCccccccccccCCeeChhhhCC
Confidence 457999999985322 234578999999999643
No 37
>d2o35a1 a.293.1.1 (A:2-80) Hypothetical protein SMc04008 {Rhizobium meliloti [TaxId: 382]}
Probab=32.61 E-value=8 Score=28.46 Aligned_cols=12 Identities=25% Similarity=0.852 Sum_probs=10.8
Q ss_pred cccHHHHHHHHh
Q 016632 56 EFHLQCVLEWCQ 67 (386)
Q Consensus 56 ~FC~~CI~~Wlq 67 (386)
.||.-||..|+.
T Consensus 39 GFCRNCLskWy~ 50 (79)
T d2o35a1 39 GFCRNCLSNWYR 50 (79)
T ss_dssp SCCHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 499999999985
No 38
>d1vfya_ g.50.1.1 (A:) vps27p protein {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=32.36 E-value=11 Score=26.40 Aligned_cols=33 Identities=30% Similarity=0.506 Sum_probs=23.5
Q ss_pred CcccccccccccCCCC-eeecccCCcccHHHHHH
Q 016632 32 DDACSICLEEFSESDP-STVTSCKHEFHLQCVLE 64 (386)
Q Consensus 32 d~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~ 64 (386)
+..|.+|...|..... ..--.||..||..|...
T Consensus 5 ~~~C~~C~~~F~~~~rkhhCr~CG~~fC~~Cs~~ 38 (67)
T d1vfya_ 5 SDACMICSKKFSLLNRKHHCRSCGGVFCQEHSSN 38 (67)
T ss_dssp CSBCTTTCCBCBTTBCCEECTTTCCEECGGGSCE
T ss_pred CcccccCCCcccCcccccccccCCCEecccccCC
Confidence 4579999998843221 34467999999999543
No 39
>d2dloa1 g.39.1.3 (A:8-42) Thyroid receptor interacting protein 6, TRIP6 {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.49 E-value=6.1 Score=24.87 Aligned_cols=27 Identities=15% Similarity=0.573 Sum_probs=19.8
Q ss_pred cccccccccccCCCCeeecccCCcccHHHH
Q 016632 33 DACSICLEEFSESDPSTVTSCKHEFHLQCV 62 (386)
Q Consensus 33 ~~C~ICle~f~~~d~~~vlpCgH~FC~~CI 62 (386)
..|.+|-+.+.+ ..+-..|-.||..|+
T Consensus 9 EkC~~C~~~I~d---riLrA~Gk~yHP~CF 35 (35)
T d2dloa1 9 EKCATCSQPILD---RILRAMGKAYHPGCF 35 (35)
T ss_dssp CBCTTTCCBCCS---CCEEETTEEECTTTC
T ss_pred HHHHHhchHHHH---HHHHHhCCCCCCCCC
Confidence 469999999844 344468888888773
No 40
>d1weea_ g.50.1.2 (A:) PHD finger protein At1g33420 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=26.64 E-value=9.2 Score=26.73 Aligned_cols=47 Identities=15% Similarity=0.260 Sum_probs=28.5
Q ss_pred CCcccccccccccCCCC-eeecccCCcccHHHHHHHHh----cCCCCCCCccc
Q 016632 31 CDDACSICLEEFSESDP-STVTSCKHEFHLQCVLEWCQ----RSSQCPMCWQP 78 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~-~~vlpCgH~FC~~CI~~Wlq----~~~sCP~CR~~ 78 (386)
....| ||.......+. +.--.|...||..|+..-.. ....||.|+..
T Consensus 15 ~~~~C-~C~~~~~~~~~mv~Cd~C~~w~H~~C~g~~~~~~~~~~~~C~~C~~~ 66 (72)
T d1weea_ 15 WKVDC-KCGTKDDDGERMLACDGCGVWHHTRCIGINNADALPSKFLCFRCIEL 66 (72)
T ss_dssp SEECC-TTCCCSCCSSCEEECSSSCEEEETTTTTCCTTSCCCSCCCCHHHHHH
T ss_pred CeEEe-eCCCCcCCCCeEEEeCCCCCcCchhhcCCccccCCCCcEECcCCcCc
Confidence 34567 78766533333 23367888999999743211 23568888653
No 41
>d2ct7a1 g.44.1.4 (A:8-80) Ring finger protein 31 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.15 E-value=3.4 Score=29.48 Aligned_cols=37 Identities=22% Similarity=0.507 Sum_probs=23.0
Q ss_pred CcccccccccccCC--C-CeeecccCCcccHHHHHHHHhc
Q 016632 32 DDACSICLEEFSES--D-PSTVTSCKHEFHLQCVLEWCQR 68 (386)
Q Consensus 32 d~~C~ICle~f~~~--d-~~~vlpCgH~FC~~CI~~Wlq~ 68 (386)
-.-||-|-..+.-. . .++...|++.||+.|-..|-..
T Consensus 18 ~k~CP~C~~~~~~~~~~~~~~C~~C~~~fC~~C~~~w~~~ 57 (73)
T d2ct7a1 18 FLWCAQCSFGFIYEREQLEATCPQCHQTFCVRCKRQWEEQ 57 (73)
T ss_dssp EECCSSSCCCEECCCSCSCEECTTTCCEECSSSCSBCCTT
T ss_pred CCCCCCCCCEeEECCCCCEEEcCCCCCeECcccCcchhcC
Confidence 34588886654321 1 1344578899998887777443
No 42
>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}
Probab=24.89 E-value=8.8 Score=29.76 Aligned_cols=32 Identities=22% Similarity=0.442 Sum_probs=21.8
Q ss_pred CCeeecccCCcccHHHHHHHHhcCCCCCCCcccCCCC
Q 016632 46 DPSTVTSCKHEFHLQCVLEWCQRSSQCPMCWQPISLK 82 (386)
Q Consensus 46 d~~~vlpCgH~FC~~CI~~Wlq~~~sCP~CR~~i~~~ 82 (386)
.|+....||-.|= .-+..-..||.|+..+...
T Consensus 66 ~Pp~CrkCGfvFr-----~~~kkPSRCP~CKSE~Ie~ 97 (105)
T d2gmga1 66 KPAQCRKCGFVFK-----AEINIPSRCPKCKSEWIEE 97 (105)
T ss_dssp CCCBBTTTCCBCC-----CCSSCCSSCSSSCCCCBCC
T ss_pred eChhhhhcCCeec-----ccCCCCCCCCCCCCccccC
Confidence 5677788998882 1233345799999887654
No 43
>d1x4ka1 g.39.1.3 (A:35-66) Four and a half LIM domains protein 2, FHL2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.64 E-value=24 Score=21.53 Aligned_cols=29 Identities=17% Similarity=0.429 Sum_probs=22.3
Q ss_pred cccccccccCCCCeeecccCCcccHHHHHHH
Q 016632 35 CSICLEEFSESDPSTVTSCKHEFHLQCVLEW 65 (386)
Q Consensus 35 C~ICle~f~~~d~~~vlpCgH~FC~~CI~~W 65 (386)
|..|...+ +....+..=.+.||..|...-
T Consensus 2 C~~C~qPI--Gtksfipk~~~~yCvpCyE~k 30 (32)
T d1x4ka1 2 CHRCQQPI--GTKSFIPKDNQNFCVPCYEKQ 30 (32)
T ss_dssp CSSSCCCC--CSSSEEEETTEEEEHHHHHHH
T ss_pred cccccCcc--cccccccCCCCceEeecchhh
Confidence 77888887 555666677889999998753
No 44
>d2d8va1 g.43.1.1 (A:8-61) Zinc finger FYVE domain-containing protein 19 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.56 E-value=15 Score=25.10 Aligned_cols=27 Identities=26% Similarity=0.613 Sum_probs=19.9
Q ss_pred cccccccccCCCCeeecccC-CcccHHHHHHH
Q 016632 35 CSICLEEFSESDPSTVTSCK-HEFHLQCVLEW 65 (386)
Q Consensus 35 C~ICle~f~~~d~~~vlpCg-H~FC~~CI~~W 65 (386)
|.||.+.- ..+.+.|. -.||..|+.+-
T Consensus 4 C~ICneDA----~lrC~gCdgdLyC~rC~rE~ 31 (54)
T d2d8va1 4 CCICNEDA----TLRCAGCDGDLYCARCFREG 31 (54)
T ss_dssp CTTTCSCC----CEEETTTTSEEECSSHHHHH
T ss_pred eEEecCCC----ceEecCCCCceehHHHHHHh
Confidence 88999884 24667775 58999997663
No 45
>d2dasa1 g.39.1.17 (A:8-56) Zinc finger MYM-type protein 5 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.17 E-value=37 Score=22.52 Aligned_cols=35 Identities=14% Similarity=0.403 Sum_probs=26.7
Q ss_pred CCcccccccccccCCCCeee-cccCCcccH-HHHHHH
Q 016632 31 CDDACSICLEEFSESDPSTV-TSCKHEFHL-QCVLEW 65 (386)
Q Consensus 31 ~d~~C~ICle~f~~~d~~~v-lpCgH~FC~-~CI~~W 65 (386)
....|.-|...|..+..... ..+.|.||. .||..+
T Consensus 12 ~~v~Ca~Ckk~lqKGQTAyqrkGs~~LFCSt~Cl~~~ 48 (49)
T d2dasa1 12 AKITCANCKKPLQKGQTAYQRKGSAHLFCSTTCLSSF 48 (49)
T ss_dssp SSCBCTTTCCBCCTTSCCEECTTCCCEESSHHHHHHH
T ss_pred eEeEecccchHHhccchHHhhCCCcceeEcchhhccc
Confidence 36789999999977666544 568899997 588764
No 46
>d1wyha1 g.39.1.3 (A:35-66) Four and a half LIM domains 3, FHL3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.13 E-value=32 Score=20.90 Aligned_cols=29 Identities=21% Similarity=0.360 Sum_probs=22.1
Q ss_pred cccccccccCCCCeeecccCCcccHHHHHHH
Q 016632 35 CSICLEEFSESDPSTVTSCKHEFHLQCVLEW 65 (386)
Q Consensus 35 C~ICle~f~~~d~~~vlpCgH~FC~~CI~~W 65 (386)
|.-|...+ +...-+..=.+.||..|.+.-
T Consensus 2 C~~C~qPI--GtkSFip~~~~~yCvpCYE~k 30 (32)
T d1wyha1 2 CSGCEQPL--GSRSFVPDKGAHYCVPCYENK 30 (32)
T ss_dssp CTTTCCBT--TTSCEEEETTEEEEHHHHHHH
T ss_pred cccccCcc--cccccccCCCcEEEEeccccc
Confidence 77788887 555666677899999998753
No 47
>d2dara1 g.39.1.3 (A:53-84) PDZ and LIM domain protein 5, Enigma {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.04 E-value=38 Score=20.59 Aligned_cols=30 Identities=13% Similarity=0.258 Sum_probs=19.8
Q ss_pred cccccccccCCCCeeecccCCcccHHHHHHHH
Q 016632 35 CSICLEEFSESDPSTVTSCKHEFHLQCVLEWC 66 (386)
Q Consensus 35 C~ICle~f~~~d~~~vlpCgH~FC~~CI~~Wl 66 (386)
|.-|...+. +-.-+-.=+..||..|..+++
T Consensus 2 Ca~C~~sL~--d~gFVEE~g~lYCe~Cye~ff 31 (32)
T d2dara1 2 CAHCKNTMA--YIGFVEEKGALYCELCYEKFF 31 (32)
T ss_dssp CSSSCCBCS--SSCBEESSSCEECHHHHHHHT
T ss_pred cccccccHh--hcceeeecCcEeHHHHHHHhc
Confidence 667777762 223444567788988988764
Done!