Query 016633
Match_columns 386
No_of_seqs 167 out of 1161
Neff 5.6
Searched_HMMs 13730
Date Mon Mar 25 16:52:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016633.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/016633hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1efub2 d.43.1.1 (B:140-282) E 100.0 5.3E-45 3.9E-49 319.0 13.2 126 241-386 2-127 (143)
2 d1tfea_ d.43.1.1 (A:) Elongati 100.0 2.2E-43 1.6E-47 309.0 11.7 139 239-382 3-142 (142)
3 d1xb2b2 d.43.1.1 (B:112-222) E 100.0 1E-28 7.3E-33 207.1 11.8 107 126-237 1-110 (111)
4 d1xb2b3 d.43.1.1 (B:223-331) E 100.0 1.1E-28 7.8E-33 206.5 9.9 103 239-383 1-109 (109)
5 d1efub4 d.43.1.1 (B:55-139) El 99.9 3.7E-26 2.7E-30 183.0 9.0 84 128-235 1-84 (85)
6 d1aipc1 a.5.2.2 (C:2-53) Elong 99.9 1.1E-24 8.4E-29 158.2 5.0 51 77-127 2-52 (52)
7 d1xb2b1 a.5.2.2 (B:56-111) Elo 99.9 1E-23 7.5E-28 155.2 4.7 53 76-128 3-55 (56)
8 d1efub3 a.5.2.2 (B:1-54) Elong 99.9 2.6E-23 1.9E-27 152.1 5.1 50 78-127 5-54 (54)
9 d1tfea_ d.43.1.1 (A:) Elongati 99.3 1.1E-12 7.9E-17 113.2 8.8 100 129-236 1-140 (142)
10 d1xb2b2 d.43.1.1 (B:112-222) E 98.4 2.6E-07 1.9E-11 75.7 6.7 103 239-380 6-109 (111)
11 d1xb2b3 d.43.1.1 (B:223-331) E 97.3 0.00065 4.7E-08 54.8 9.5 82 140-236 23-106 (109)
12 d1vg5a_ a.5.2.1 (A:) Rhomboid 96.5 0.0018 1.3E-07 48.7 5.3 37 79-116 31-67 (73)
13 d1efub4 d.43.1.1 (B:55-139) El 96.3 0.0022 1.6E-07 49.4 5.3 80 239-379 4-84 (85)
14 d1wjia_ a.5.2.1 (A:) Tudor dom 96.1 0.0031 2.3E-07 45.9 4.7 37 79-116 11-47 (63)
15 d2cpwa1 a.5.2.1 (A:8-58) Cbl-i 95.9 0.0032 2.3E-07 44.1 3.9 35 79-114 14-49 (51)
16 d1wgna_ a.5.2.1 (A:) Ubiquitin 95.8 0.0023 1.7E-07 46.7 2.9 38 79-117 21-58 (63)
17 d1oqya1 a.5.2.1 (A:160-200) DN 95.7 0.0021 1.6E-07 43.0 2.0 34 79-113 6-39 (41)
18 d2daha1 a.5.2.1 (A:8-48) Ubiqu 95.4 0.012 8.7E-07 39.3 5.1 36 80-115 5-40 (41)
19 d1wiva_ a.5.2.1 (A:) Ubiquitin 94.9 0.016 1.2E-06 43.1 5.1 37 79-116 31-67 (73)
20 d2bwba1 a.5.2.1 (A:328-371) DS 94.7 0.021 1.5E-06 38.7 4.6 36 79-114 7-42 (44)
21 d1efub2 d.43.1.1 (B:140-282) E 94.6 0.038 2.8E-06 46.2 7.3 37 133-178 2-39 (143)
22 d2dnaa1 a.5.2.1 (A:12-61) Ubiq 94.6 0.03 2.2E-06 38.8 5.5 38 78-115 9-46 (50)
23 d1wj7a1 a.5.2.1 (A:8-98) Ubiqu 94.3 0.038 2.8E-06 42.7 6.0 40 78-117 33-72 (91)
24 d1veja1 a.5.2.1 (A:8-68) 49314 94.1 0.036 2.6E-06 40.0 5.1 36 79-114 24-59 (61)
25 d1oaia_ a.5.2.3 (A:) FG-bindin 94.1 0.056 4.1E-06 38.6 6.1 39 76-114 6-44 (59)
26 d1whca_ a.5.2.1 (A:) UBA/UBX 3 93.9 0.028 2E-06 40.8 4.3 37 79-116 11-48 (64)
27 d2crna1 a.5.2.1 (A:8-58) Suppr 93.9 0.022 1.6E-06 39.6 3.5 36 80-116 5-41 (51)
28 d2g3qa1 a.5.2.1 (A:1339-1381) 93.4 0.022 1.6E-06 38.1 2.6 32 84-115 8-41 (43)
29 d1v92a_ a.5.2.3 (A:) NSFL1 (p9 93.0 0.1 7.6E-06 35.2 5.7 41 77-117 5-45 (46)
30 d1vdla_ a.5.2.1 (A:) Ubiquitin 92.5 0.082 6E-06 39.3 5.0 39 79-117 26-65 (80)
31 d1veka_ a.5.2.1 (A:) Ubiquitin 91.8 0.12 9.1E-06 39.1 5.4 38 79-117 31-69 (84)
32 d1dd3a2 d.45.1.1 (A:58-128) Ri 80.0 0.62 4.5E-05 34.2 3.2 26 77-102 13-38 (71)
33 d1ctfa_ d.45.1.1 (A:) Ribosoma 78.3 0.89 6.4E-05 33.0 3.6 27 77-103 13-39 (68)
34 d2zjq51 d.45.1.1 (5:52-122) Ri 74.8 0.88 6.4E-05 33.3 2.7 25 77-102 17-41 (71)
35 d1z96a1 a.5.2.1 (A:295-332) UB 65.0 4.2 0.0003 25.2 3.9 32 81-113 6-37 (38)
36 d1r8ea1 a.6.1.3 (A:3-120) Tran 57.2 6.6 0.00048 29.9 4.9 47 63-116 39-85 (118)
37 d1r8da_ a.6.1.3 (A:) Multidrug 52.7 7.4 0.00054 29.2 4.5 45 63-111 37-81 (109)
38 d1wgla_ a.5.2.4 (A:) Toll-inte 44.0 16 0.0012 25.2 4.7 37 79-115 11-48 (59)
39 d1f1ua2 d.32.1.3 (A:148-323) H 36.9 15 0.0011 29.5 4.2 52 105-156 77-129 (176)
40 d1jc4a_ d.32.1.4 (A:) Methylma 29.7 14 0.00099 27.5 2.5 44 104-148 95-140 (145)
41 d1r9ca_ d.32.1.2 (A:) Fosfomyc 29.6 21 0.0015 26.2 3.6 48 103-152 76-123 (130)
42 d1kw3b2 d.32.1.3 (B:133-288) 2 29.1 24 0.0018 27.5 4.2 51 104-156 86-137 (156)
43 d1umqa_ a.4.1.12 (A:) Photosyn 27.7 18 0.0013 24.6 2.6 19 95-113 25-43 (60)
44 d1mpya1 d.32.1.3 (A:1-145) Cat 25.0 29 0.0021 26.0 3.7 52 105-157 77-128 (145)
45 d1xqaa_ d.32.1.2 (A:) Hypothet 23.9 29 0.0021 24.5 3.4 42 104-150 72-113 (113)
46 d2cosa1 a.5.2.1 (A:8-48) Serin 20.6 35 0.0026 21.4 2.7 21 95-115 19-40 (41)
No 1
>d1efub2 d.43.1.1 (B:140-282) Elongation factor Ts (EF-Ts), dimerisation domain {Escherichia coli [TaxId: 562]}
Probab=100.00 E-value=5.3e-45 Score=318.96 Aligned_cols=126 Identities=37% Similarity=0.584 Sum_probs=119.9
Q ss_pred eEEEEecCCCCCCCCcEEEEEEEeecCCCCCCchhhhHHHHHHHHhhhcCCcccccCCCCHHHHHHHHHHHHHHHHhcCC
Q 016633 241 VVSTYLHTSPQSGLGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAESTGK 320 (386)
Q Consensus 241 ~v~sY~H~~~~~~~Gkig~LV~l~~~~~~~~~~~~~~~ak~iAmHIaA~~P~~ls~~~Vp~~~le~Er~i~~~q~~~~gK 320 (386)
++++|+|+ ||||+||++++.+ +++||+||||||||+|.||++++||++++++||+|+++|++.+||
T Consensus 2 vi~sYiH~------gkigvlV~~~~~~--------~e~ak~iAMHIAA~~P~~l~~~~vp~~~i~kE~~i~~~q~~~~gK 67 (143)
T d1efub2 2 VLGSYQHG------ARIGVLVAAKGAD--------EELVKHIAMHVAASKPEFIKPEDVSAEVVEKEYQVQLDIAMQSGK 67 (143)
T ss_dssp EEEEEEET------TTEEEEEEEESCC--------HHHHHHHHHHHHHHCCSBSSGGGSCHHHHHHHHHHHHHHHHHTTC
T ss_pred eEEEEecC------CEEEEEEEecCcc--------HHHHHHHHHHHhccCCcccccccCCHHHHHHHHHHhHhhhhcccc
Confidence 68999994 8999999998643 479999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHhhhhhhhhcccccccccccCCCCcHHHHHHHhhhhcCCCeEEEeEEEEEecccccC
Q 016633 321 SPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEGIRR 386 (386)
Q Consensus 321 P~~i~eKIveGrl~K~~~E~~LleQ~fi~D~~~tV~~~L~~~~k~~g~~v~V~~F~R~~vGEgiek 386 (386)
|++|+|||++|||+|||+|+||++|+||+|+++||+++|++. +++|.+|+||+|||||||
T Consensus 68 Pe~i~eKIveGkl~Kf~~E~~LleQ~fv~D~~~tV~~~l~~~------~~~v~~FvRfevGEGiEk 127 (143)
T d1efub2 68 PKEIAEKMVEGRMKKFTGEVSLTGQPFVMEPSKTVGQLLKEH------NAEVTGFIRFEVGEGIEK 127 (143)
T ss_dssp CHHHHHHHHHHHHHHHHHHHBTTTSEETTEEEEEHHHHHHTT------TCEEEEEEEEETTTTSCC
T ss_pred hHHHHHHHHHHHHHHHHHhhhhcccccccCCceeHHHHHHhC------CCEEEEEEEEEecCceeE
Confidence 999999999999999999999999999999999999999885 478999999999999997
No 2
>d1tfea_ d.43.1.1 (A:) Elongation factor Ts (EF-Ts), dimerisation domain {Thermus thermophilus [TaxId: 274]}
Probab=100.00 E-value=2.2e-43 Score=309.03 Aligned_cols=139 Identities=34% Similarity=0.615 Sum_probs=129.9
Q ss_pred CCeEEEEecCCCCCCCCcEEEEEEEeecCCCC-CCchhhhHHHHHHHHhhhcCCcccccCCCCHHHHHHHHHHHHHHHHh
Q 016633 239 PGVVSTYLHTSPQSGLGRIAGLLSLEVEDGSS-SFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAES 317 (386)
Q Consensus 239 ~~~v~sY~H~~~~~~~Gkig~LV~l~~~~~~~-~~~~~~~~ak~iAmHIaA~~P~~ls~~~Vp~~~le~Er~i~~~q~~~ 317 (386)
+|++++|+|++ ||+|+||.++++++.. ..+...+++++|||||||++|.||++++||++++++||+++++|++.
T Consensus 3 eG~v~~YiH~~-----gkigvlv~l~~~~d~~~~~~~~~~~ak~iAmhiaA~~P~~i~~~~v~~~~i~~E~ei~~~~~~~ 77 (142)
T d1tfea_ 3 EGIIGHYIHHN-----QRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVSAEEIPAEELEKERQIYIQAALN 77 (142)
T ss_dssp EEEEEEEECTT-----SSEEEEEEEEESCHHHHHSHHHHHHHHHHHHHHHHHCCSBSSGGGSCHHHHHHHHHHHHHHHHT
T ss_pred CCEEEEEEcCC-----CcEEEEEEEEeccchhhhhhHHHHHHHHHHhhhhhcCcccCChhHCCHHHHHHHHHHHHHHhhc
Confidence 67999999986 9999999999875421 12345789999999999999999999999999999999999999999
Q ss_pred cCCChHHHHHHHHhhhhhhhhcccccccccccCCCCcHHHHHHHhhhhcCCCeEEEeEEEEEecc
Q 016633 318 TGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGE 382 (386)
Q Consensus 318 ~gKP~~i~eKIveGrl~K~~~E~~LleQ~fi~D~~~tV~~~L~~~~k~~g~~v~V~~F~R~~vGE 382 (386)
+|||++|+|||++|||+|||+|+||++|+||+||++||+|+|++.++++|.+++|++|+||+||-
T Consensus 78 ~gKP~~i~ekIv~Gk~~Kf~~E~~LleQ~fv~D~~~tV~~~l~~~~~~~g~~i~i~~F~R~~vG~ 142 (142)
T d1tfea_ 78 EGKPQQIAEKIAEGRLKKYLEEVVLLEQPFVKDDKVKVKELIQQAIAKIGENIVVRRFCRFELGA 142 (142)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHBGGGSEETTEEEEEHHHHHHHHHHHHCSCCEEEEEEEEETTC
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhccCCcccCCCccHHHHHHHHHHhcCCCcEEEEEEEEEecC
Confidence 99999999999999999999999999999999999999999999999999999999999999993
No 3
>d1xb2b2 d.43.1.1 (B:112-222) Elongation factor Ts (EF-Ts), dimerisation domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=99.95 E-value=1e-28 Score=207.08 Aligned_cols=107 Identities=28% Similarity=0.365 Sum_probs=85.6
Q ss_pred cccccCCcEEEEecCCeEEEEEEeccccceecchHHHHHHHHHHHHHHhhcCCCCCCCC---CCCCChhhhhccccCCCC
Q 016633 126 SRTATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYLALALAKQALVAENVSQPVSG---LFPVGPEYLEGLKLNLDH 202 (386)
Q Consensus 126 ~R~a~EGlV~~~~~~~~aalvElNCETDFVArN~~F~~la~~ia~~~l~~~~~~~~~~~---~~~l~~e~l~~~~~~~~~ 202 (386)
||.|+||+|+++++++.||||||||||||||||+.|++|+++||++++.+......... ...++.+.+..++..
T Consensus 1 GR~a~EG~I~i~~~~~~~~ivElNcETDFVArn~~F~~la~~ia~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--- 77 (111)
T d1xb2b2 1 GRKTKEGLIGLLQEGDTTVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKDQLSTYSKGFLNSSELSELPAG--- 77 (111)
T ss_dssp TSCCCEEEEEEEEETTEEEEEEEEESCHHHHTSHHHHHHHHHHHHHHHHHHTTSCCCSSSCEEEEECHHHHHTSBCC---
T ss_pred CccccccEEEEEeCCCeEEEEEEecccchhhccHHHHHHHHHHHHHHHHcCcchHHHHhhhhhhhhcccchhhhhcc---
Confidence 79999999999999999999999999999999999999999999999986543211000 011233445444432
Q ss_pred CCCCCCCcHHHHHHHHHHHhcceeeeeeeEEeeeC
Q 016633 203 PKIGGETTVQNAITEVAAIMGENVKLRRGFLLSAS 237 (386)
Q Consensus 203 ~~~~~~~Tv~d~i~~~ia~iGENI~LrR~~~~~~~ 237 (386)
..++.||+|.+.++++++||||.|||+.++++|
T Consensus 78 --~~~~~tv~d~i~~~ia~iGEnI~lrR~~~~~~p 110 (111)
T d1xb2b2 78 --PEREGSLKDQLALAIGKLGENMILKRAAWVKVP 110 (111)
T ss_dssp --SSSCSBHHHHHHHHHHHHCSCEEEEEEEEEECC
T ss_pred --ccCCCcHHHHHHHHhhhhCCCEEEEEEEEEecC
Confidence 134789999999999999999999999999876
No 4
>d1xb2b3 d.43.1.1 (B:223-331) Elongation factor Ts (EF-Ts), dimerisation domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=99.95 E-value=1.1e-28 Score=206.45 Aligned_cols=103 Identities=23% Similarity=0.358 Sum_probs=84.7
Q ss_pred CCeEEEEecCCCCC------CCCcEEEEEEEeecCCCCCCchhhhHHHHHHHHhhhcCCcccccCCCCHHHHHHHHHHHH
Q 016633 239 PGVVSTYLHTSPQS------GLGRIAGLLSLEVEDGSSSFDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILK 312 (386)
Q Consensus 239 ~~~v~sY~H~~~~~------~~Gkig~LV~l~~~~~~~~~~~~~~~ak~iAmHIaA~~P~~ls~~~Vp~~~le~Er~i~~ 312 (386)
++++++|+|+...+ .+||+|+||.+++++.. +..++++|+||||||||+|.|+++.+..
T Consensus 1 G~~igsYiHg~~~~~~~~~~~lGkig~lv~~~~~~~~---~~~~~l~k~iAmhIaA~~P~~i~~~~~~------------ 65 (109)
T d1xb2b3 1 GFYVGSYVHGAMHSPSLHNLVLGKYGALVICETSELK---ANLADLGRRLGQHVVGMAPLSVGSLDDE------------ 65 (109)
T ss_dssp TEEEEEEEESCCCCTTSTTCEEESEEEEEEEECCSCG---GGCHHHHHHHHHHHHHHCCSBCCCTTSC------------
T ss_pred CCEEEEEeCCCcccccccccccccEEEEEEEccCCCc---cCHHHHHHHHHHHHHhcCCcccCccccc------------
Confidence 46899999987532 35999999999875432 3356899999999999999999875532
Q ss_pred HHHHhcCCChHHHHHHHHhhhhhhhhcccccccccccCCCCcHHHHHHHhhhhcCCCeEEEeEEEEEeccc
Q 016633 313 SQAESTGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEVGEG 383 (386)
Q Consensus 313 ~q~~~~gKP~~i~eKIveGrl~K~~~E~~LleQ~fi~D~~~tV~~~L~~~~k~~g~~v~V~~F~R~~vGEg 383 (386)
|+. -+|+||++|+||+|+++||+|+|++. +++|.+|+||+||||
T Consensus 66 --------~~~-------------~~E~~Ll~Q~fvkD~~~tV~~~l~~~------~i~v~~F~Rf~vGEG 109 (109)
T d1xb2b3 66 --------PGG-------------EAETKMLSQPYLLDPSITLGQYVQPH------GVSVVDFVRFECGEG 109 (109)
T ss_dssp --------CCG-------------GGCCBGGGSBCTTCTTSBHHHHHGGG------TCEEEEEEEEETTCC
T ss_pred --------ccc-------------chhheecccccccCCccCHHHHHHHC------CCEEEEEEEEEecCC
Confidence 211 15999999999999999999999875 589999999999997
No 5
>d1efub4 d.43.1.1 (B:55-139) Elongation factor Ts (EF-Ts), dimerisation domain {Escherichia coli [TaxId: 562]}
Probab=99.92 E-value=3.7e-26 Score=183.00 Aligned_cols=84 Identities=26% Similarity=0.441 Sum_probs=73.9
Q ss_pred cccCCcEEEEecCCeEEEEEEeccccceecchHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChhhhhccccCCCCCCCCC
Q 016633 128 TATEGLLALAQNESKAAVIELNCETDFVSRNEIFQYLALALAKQALVAENVSQPVSGLFPVGPEYLEGLKLNLDHPKIGG 207 (386)
Q Consensus 128 ~a~EGlV~~~~~~~~aalvElNCETDFVArN~~F~~la~~ia~~~l~~~~~~~~~~~~~~l~~e~l~~~~~~~~~~~~~~ 207 (386)
.|+||+|++++++++|+||||||||||||||+.|++|++.|++.++.+... +.+.+
T Consensus 1 vA~EG~I~~~~~~~~~~ivEvncETDFVAkne~F~~l~~~i~~~~~~~~~~----------~~~~~-------------- 56 (85)
T d1efub4 1 VAADGVIKTKIDGNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKIT----------DVEVL-------------- 56 (85)
T ss_dssp CCCEEEEEEEEETTEEEEEEEEESCHHHHTCHHHHHHHHHHHHHHHHTTCC----------CHHHH--------------
T ss_pred CccceEEEEEEcCCeEEEEEEeccCcchhcchHHHHHHHHHHHHHHhcCcc----------cHHHH--------------
Confidence 478999999999999999999999999999999999999999999876533 12222
Q ss_pred CCcHHHHHHHHHHHhcceeeeeeeEEee
Q 016633 208 ETTVQNAITEVAAIMGENVKLRRGFLLS 235 (386)
Q Consensus 208 ~~Tv~d~i~~~ia~iGENI~LrR~~~~~ 235 (386)
+.|++|.+..+++++||||.|||+.++.
T Consensus 57 ~~~v~e~~~~~iakiGEnI~irR~~~~e 84 (85)
T d1efub4 57 KAQFEEERVALVAKIGENINIRRVAALE 84 (85)
T ss_dssp HHHHHHHHHHHHHHHCSCCEEEEEEEEE
T ss_pred hchHHHHHHHHHHHhcCCEEEeEEEEee
Confidence 3489999999999999999999999874
No 6
>d1aipc1 a.5.2.2 (C:2-53) Elongation factor Ts (EF-Ts), N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=99.89 E-value=1.1e-24 Score=158.19 Aligned_cols=51 Identities=55% Similarity=0.747 Sum_probs=49.7
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHcccccccccccc
Q 016633 77 QVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSR 127 (386)
Q Consensus 77 ~~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkkG~akA~Kka~R 127 (386)
.|++||+||++||+||||||+||+++|||+|+|++|||++|+++|.||++|
T Consensus 2 ~~elvK~LR~~Tga~~~dcKkAL~e~~gD~ekA~e~Lr~~G~~kA~Kk~~R 52 (52)
T d1aipc1 2 QMELIKKLREATGAGMMDVKRALEDAGWDEEKAVQLLRERGAMKAAKKADR 52 (52)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHHHhcCC
Confidence 479999999999999999999999999999999999999999999999998
No 7
>d1xb2b1 a.5.2.2 (B:56-111) Elongation factor Ts (EF-Ts), N-terminal domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=99.88 E-value=1e-23 Score=155.23 Aligned_cols=53 Identities=26% Similarity=0.315 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHccccccccccccc
Q 016633 76 EQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSRT 128 (386)
Q Consensus 76 ~~~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkkG~akA~Kka~R~ 128 (386)
.++++||+||++||+||||||+||+++|||+|+|++|||++|.++|.||++|.
T Consensus 3 ~s~~lvk~LRe~Tga~~~dcKkAL~e~~gD~ekA~e~LrkkG~a~a~kKa~Rl 55 (56)
T d1xb2b1 3 SSKELLMKLRRKTGYSFINCKKALETCGGDLKQAESWLHKQAQKEGWSKAARL 55 (56)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhcc
Confidence 45799999999999999999999999999999999999999999999999985
No 8
>d1efub3 a.5.2.2 (B:1-54) Elongation factor Ts (EF-Ts), N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.87 E-value=2.6e-23 Score=152.11 Aligned_cols=50 Identities=44% Similarity=0.632 Sum_probs=48.3
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHcccccccccccc
Q 016633 78 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRGKVLASKKSSR 127 (386)
Q Consensus 78 ~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkkG~akA~Kka~R 127 (386)
+++||+||++||+||||||+||++++||+|+|++|||++|+++|.||+|.
T Consensus 5 ~~~iK~LR~~Tgag~~dCKkAL~e~~gD~ekA~e~Lr~kG~~~A~Kk~Gn 54 (54)
T d1efub3 5 ASLVKELRERTGAGMMDCKKALTEANGDIELAIENMRKSGAIKAAKKAGN 54 (54)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHcCCCHHHHHHHHHHHhHHHHHHhcCC
Confidence 58999999999999999999999999999999999999999999999874
No 9
>d1tfea_ d.43.1.1 (A:) Elongation factor Ts (EF-Ts), dimerisation domain {Thermus thermophilus [TaxId: 274]}
Probab=99.34 E-value=1.1e-12 Score=113.22 Aligned_cols=100 Identities=31% Similarity=0.394 Sum_probs=76.9
Q ss_pred ccCCcEEEEec--CCeEEEEEEeccccceecchHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChhh--------------
Q 016633 129 ATEGLLALAQN--ESKAAVIELNCETDFVSRNEIFQYLALALAKQALVAENVSQPVSGLFPVGPEY-------------- 192 (386)
Q Consensus 129 a~EGlV~~~~~--~~~aalvElNCETDFVArN~~F~~la~~ia~~~l~~~~~~~~~~~~~~l~~e~-------------- 192 (386)
|.||+|+.|++ ++.||||+++||||||++|+.|+.|+++||..+....+...+ ...++++.
T Consensus 1 a~eG~v~~YiH~~gkigvlv~l~~~~d~~~~~~~~~~~ak~iAmhiaA~~P~~i~---~~~v~~~~i~~E~ei~~~~~~~ 77 (142)
T d1tfea_ 1 AREGIIGHYIHHNQRVGVLVELNCETDFVARNELFQNLAKDLAMHIAMMNPRYVS---AEEIPAEELEKERQIYIQAALN 77 (142)
T ss_dssp CCEEEEEEEECTTSSEEEEEEEEESCHHHHHSHHHHHHHHHHHHHHHHHCCSBSS---GGGSCHHHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEEEcCCCcEEEEEEEEeccchhhhhhHHHHHHHHHHhhhhhcCcccCC---hhHCCHHHHHHHHHHHHHHhhc
Confidence 57999999996 357999999999999999999999999999988876554222 11222211
Q ss_pred ------------------------hhccccCCCCCCCCCCCcHHHHHHHHHHHhcceeeeeeeEEeee
Q 016633 193 ------------------------LEGLKLNLDHPKIGGETTVQNAITEVAAIMGENVKLRRGFLLSA 236 (386)
Q Consensus 193 ------------------------l~~~~~~~~~~~~~~~~Tv~d~i~~~ia~iGENI~LrR~~~~~~ 236 (386)
|+.+++. .+++.||+|.+.+..+++|+||.|+||.++..
T Consensus 78 ~gKP~~i~ekIv~Gk~~Kf~~E~~LleQ~fv-----~D~~~tV~~~l~~~~~~~g~~i~i~~F~R~~v 140 (142)
T d1tfea_ 78 EGKPQQIAEKIAEGRLKKYLEEVVLLEQPFV-----KDDKVKVKELIQQAIAKIGENIVVRRFCRFEL 140 (142)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHHHBGGGSEET-----TEEEEEHHHHHHHHHHHHCSCCEEEEEEEEET
T ss_pred cccHHHHHHHHHHHHHHHHHHHhhhccCCcc-----cCCCccHHHHHHHHHHhcCCCcEEEEEEEEEe
Confidence 2222221 23468999999999999999999999999864
No 10
>d1xb2b2 d.43.1.1 (B:112-222) Elongation factor Ts (EF-Ts), dimerisation domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=98.37 E-value=2.6e-07 Score=75.68 Aligned_cols=103 Identities=12% Similarity=0.074 Sum_probs=78.4
Q ss_pred CCeEEEEecCCCCCCCCcEEEEEEEeecCCCCC-CchhhhHHHHHHHHhhhcCCcccccCCCCHHHHHHHHHHHHHHHHh
Q 016633 239 PGVVSTYLHTSPQSGLGRIAGLLSLEVEDGSSS-FDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAES 317 (386)
Q Consensus 239 ~~~v~sY~H~~~~~~~Gkig~LV~l~~~~~~~~-~~~~~~~ak~iAmHIaA~~P~~ls~~~Vp~~~le~Er~i~~~q~~~ 317 (386)
+|.++.|.. |+.|+||.+..+++... .+....|+++||||+++..|........
T Consensus 6 EG~I~i~~~-------~~~~~ivElNcETDFVArn~~F~~la~~ia~~~~~~~~~~~~~~~~------------------ 60 (111)
T d1xb2b2 6 EGLIGLLQE-------GDTTVLVEVNCETDFVSRNLKFQQLVQQVALGTLLHCQNLKDQLST------------------ 60 (111)
T ss_dssp EEEEEEEEE-------TTEEEEEEEEESCHHHHTSHHHHHHHHHHHHHHHHHHTTSCCCSSS------------------
T ss_pred ccEEEEEeC-------CCeEEEEEEecccchhhccHHHHHHHHHHHHHHHHcCcchHHHHhh------------------
Confidence 577765554 68999999999876421 3456789999999999987754332111
Q ss_pred cCCChHHHHHHHHhhhhhhhhcccccccccccCCCCcHHHHHHHhhhhcCCCeEEEeEEEEEe
Q 016633 318 TGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRMEV 380 (386)
Q Consensus 318 ~gKP~~i~eKIveGrl~K~~~E~~LleQ~fi~D~~~tV~~~L~~~~k~~g~~v~V~~F~R~~v 380 (386)
. ...++....|.+|++..++..||+|.+.+....+|.++.|.+|.||++
T Consensus 61 --~------------~~~~~~~~~l~~~~~~~~~~~tv~d~i~~~ia~iGEnI~lrR~~~~~~ 109 (111)
T d1xb2b2 61 --Y------------SKGFLNSSELSELPAGPEREGSLKDQLALAIGKLGENMILKRAAWVKV 109 (111)
T ss_dssp --C------------EEEEECHHHHHTSBCCSSSCSBHHHHHHHHHHHHCSCEEEEEEEEEEC
T ss_pred --h------------hhhhhcccchhhhhccccCCCcHHHHHHHHhhhhCCCEEEEEEEEEec
Confidence 0 112344556888999999999999999999999999999999999986
No 11
>d1xb2b3 d.43.1.1 (B:223-331) Elongation factor Ts (EF-Ts), dimerisation domain {Cow (Bos taurus), mitochondrial [TaxId: 9913]}
Probab=97.28 E-value=0.00065 Score=54.82 Aligned_cols=82 Identities=10% Similarity=0.004 Sum_probs=54.4
Q ss_pred CCeEEEEEEeccccceecchHHHHHHHHHHHHHHhhcCCCCCCCCCCCCChh--hhhccccCCCCCCCCCCCcHHHHHHH
Q 016633 140 ESKAAVIELNCETDFVSRNEIFQYLALALAKQALVAENVSQPVSGLFPVGPE--YLEGLKLNLDHPKIGGETTVQNAITE 217 (386)
Q Consensus 140 ~~~aalvElNCETDFVArN~~F~~la~~ia~~~l~~~~~~~~~~~~~~l~~e--~l~~~~~~~~~~~~~~~~Tv~d~i~~ 217 (386)
++.+|||+++|+ .++..|..|+++||..+....+.........+-..+ .|+.+++. .+++.||+|.+.+
T Consensus 23 Gkig~lv~~~~~----~~~~~~~~l~k~iAmhIaA~~P~~i~~~~~~~~~~~E~~Ll~Q~fv-----kD~~~tV~~~l~~ 93 (109)
T d1xb2b3 23 GKYGALVICETS----ELKANLADLGRRLGQHVVGMAPLSVGSLDDEPGGEAETKMLSQPYL-----LDPSITLGQYVQP 93 (109)
T ss_dssp ESEEEEEEEECC----SCGGGCHHHHHHHHHHHHHHCCSBCCCTTSCCCGGGCCBGGGSBCT-----TCTTSBHHHHHGG
T ss_pred ccEEEEEEEccC----CCccCHHHHHHHHHHHHHhcCCcccCccccccccchhheecccccc-----cCCccCHHHHHHH
Confidence 467999998875 345667889999999998776543221111111111 14555543 2457899998876
Q ss_pred HHHHhcceeeeeeeEEeee
Q 016633 218 VAAIMGENVKLRRGFLLSA 236 (386)
Q Consensus 218 ~ia~iGENI~LrR~~~~~~ 236 (386)
+||.+.||.++..
T Consensus 94 ------~~i~v~~F~Rf~v 106 (109)
T d1xb2b3 94 ------HGVSVVDFVRFEC 106 (109)
T ss_dssp ------GTCEEEEEEEEET
T ss_pred ------CCCEEEEEEEEEe
Confidence 7999999999976
No 12
>d1vg5a_ a.5.2.1 (A:) Rhomboid family protein At3g58460 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=96.48 E-value=0.0018 Score=48.66 Aligned_cols=37 Identities=24% Similarity=0.278 Sum_probs=31.8
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHc
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKR 116 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkk 116 (386)
+.|.+|.++ |..--.|++||..|+||+|.|++||-..
T Consensus 31 e~i~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Ll~~ 67 (73)
T d1vg5a_ 31 EQIQKLVAM-GFDRTQVEVALAAADDDLTVAVEILMSQ 67 (73)
T ss_dssp HHHHHHHTT-TCCHHHHHHHHHHHTSCHHHHHHHHHTC
T ss_pred HHHHHHHHh-CCCHHHHHHHHHHhCCCHHHHHHHHHhC
Confidence 567777654 6888999999999999999999999653
No 13
>d1efub4 d.43.1.1 (B:55-139) Elongation factor Ts (EF-Ts), dimerisation domain {Escherichia coli [TaxId: 562]}
Probab=96.35 E-value=0.0022 Score=49.44 Aligned_cols=80 Identities=15% Similarity=0.180 Sum_probs=60.0
Q ss_pred CCeEEEEecCCCCCCCCcEEEEEEEeecCCCCC-CchhhhHHHHHHHHhhhcCCcccccCCCCHHHHHHHHHHHHHHHHh
Q 016633 239 PGVVSTYLHTSPQSGLGRIAGLLSLEVEDGSSS-FDPLKRVGSELAMHIVAQKPLFLTKELVSADALENEREILKSQAES 317 (386)
Q Consensus 239 ~~~v~sY~H~~~~~~~Gkig~LV~l~~~~~~~~-~~~~~~~ak~iAmHIaA~~P~~ls~~~Vp~~~le~Er~i~~~q~~~ 317 (386)
+|.++.|++ |+.|+||.+..+++... .+....|+++|++|+.+.+|.-+. .
T Consensus 4 EG~I~~~~~-------~~~~~ivEvncETDFVAkne~F~~l~~~i~~~~~~~~~~~~~-------~-------------- 55 (85)
T d1efub4 4 DGVIKTKID-------GNYGIILEVNCQTDFVAKDAGFQAFADKVLDAAVAGKITDVE-------V-------------- 55 (85)
T ss_dssp EEEEEEEEE-------TTEEEEEEEEESCHHHHTCHHHHHHHHHHHHHHHHTTCCCHH-------H--------------
T ss_pred ceEEEEEEc-------CCeEEEEEEeccCcchhcchHHHHHHHHHHHHHHhcCcccHH-------H--------------
Confidence 688999997 45799999999876421 244668999999999887664210 0
Q ss_pred cCCChHHHHHHHHhhhhhhhhcccccccccccCCCCcHHHHHHHhhhhcCCCeEEEeEEEEE
Q 016633 318 TGKSPMAIEKMVEGRLRKYYEEVVLMEQKFVMNDTLNIKTILDNLSKEVGSPVKIGSFFRME 379 (386)
Q Consensus 318 ~gKP~~i~eKIveGrl~K~~~E~~LleQ~fi~D~~~tV~~~L~~~~k~~g~~v~V~~F~R~~ 379 (386)
. +.||.+.+.+...++|.++.|.+|.+++
T Consensus 56 -------~--------------------------~~~v~e~~~~~iakiGEnI~irR~~~~e 84 (85)
T d1efub4 56 -------L--------------------------KAQFEEERVALVAKIGENINIRRVAALE 84 (85)
T ss_dssp -------H--------------------------HHHHHHHHHHHHHHHCSCCEEEEEEEEE
T ss_pred -------H--------------------------hchHHHHHHHHHHHhcCCEEEeEEEEee
Confidence 0 1267788888888899999999999986
No 14
>d1wjia_ a.5.2.1 (A:) Tudor domain containing protein 3, TDRD3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.10 E-value=0.0031 Score=45.86 Aligned_cols=37 Identities=27% Similarity=0.321 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHc
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKR 116 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkk 116 (386)
++|.+|=++ |.+-..|++||..++||+++|++||-..
T Consensus 11 ~~v~~L~~M-GF~~~~a~~AL~~~~~~~e~A~~wL~~~ 47 (63)
T d1wjia_ 11 KALKHITEM-GFSKEASRQALMDNGNNLEAALNVLLTS 47 (63)
T ss_dssp HHHHHHHTT-TCCHHHHHHHHHHTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHhCCCHHHHHHHHHHC
Confidence 567777655 8999999999999999999999999875
No 15
>d2cpwa1 a.5.2.1 (A:8-58) Cbl-interacting protein p70, STS1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.93 E-value=0.0032 Score=44.10 Aligned_cols=35 Identities=17% Similarity=0.117 Sum_probs=30.0
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCC-CHHHHHHHHH
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDW-DIEAALKELR 114 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ng-DiekAi~~LR 114 (386)
..|.+|=+ -|-+--.|++||..++| |+|.|++||-
T Consensus 14 ~~l~~L~~-MGF~~~~a~~AL~~t~n~~ve~A~~WLl 49 (51)
T d2cpwa1 14 SALDVLLS-MGFPRARAQKALASTGGRSVQTACDWLF 49 (51)
T ss_dssp CHHHHHHH-HTCCHHHHHHHHHHTTTSCHHHHHHHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHCCCCHHHHHHHHH
Confidence 35666664 68999999999999987 9999999995
No 16
>d1wgna_ a.5.2.1 (A:) Ubiquitin-associated protein 1, UBAP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.81 E-value=0.0023 Score=46.66 Aligned_cols=38 Identities=16% Similarity=0.070 Sum_probs=33.3
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHcc
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRG 117 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkkG 117 (386)
+.|.+|-++ |.+-..|++||..|+||+|.|++||-...
T Consensus 21 ~~v~~L~~M-GF~~~~a~~AL~~~~~n~e~A~~~Lls~~ 58 (63)
T d1wgna_ 21 QCVETVVNM-GYSYECVLRAMKKKGENIEQILDYLFAHS 58 (63)
T ss_dssp HHHHHHHHH-HCCHHHHHHHHHHHCSCHHHHHHHHHHHS
T ss_pred HHHHHHHHc-CCCHHHHHHHHHHcCCCHHHHHHHHHhCC
Confidence 678888765 78999999999999999999999998653
No 17
>d1oqya1 a.5.2.1 (A:160-200) DNA repair protein Hhr23a {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.68 E-value=0.0021 Score=43.02 Aligned_cols=34 Identities=15% Similarity=0.099 Sum_probs=29.2
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHH
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKEL 113 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~L 113 (386)
+.|++|-+ .|.+=-.|++||..++||+|.|++||
T Consensus 6 ~~i~~L~~-MGF~~~~a~~AL~~~~~N~e~A~~~L 39 (41)
T d1oqya1 6 TMLTEIMS-MGYERERVVAALRASYNNPHRAVEYL 39 (41)
T ss_dssp HHHHHHHT-TTCCSHHHHHHHHHSCSSTTHHHHTT
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHhCCCHHHHHHHH
Confidence 45666655 57888999999999999999999998
No 18
>d2daha1 a.5.2.1 (A:8-48) Ubiquilin-3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=95.44 E-value=0.012 Score=39.31 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=29.1
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHH
Q 016633 80 LIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRK 115 (386)
Q Consensus 80 lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRk 115 (386)
-+.+||++-=.---.|-.||..++||+++|++.|.+
T Consensus 5 QL~~L~~MGF~d~~~Ni~AL~~t~Gdv~~Aie~Ll~ 40 (41)
T d2daha1 5 QLEQLRSMGFLNREANLQALIATGGDVDAAVEKLRQ 40 (41)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 456777764455667999999999999999999864
No 19
>d1wiva_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=94.95 E-value=0.016 Score=43.14 Aligned_cols=37 Identities=19% Similarity=0.060 Sum_probs=32.7
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHc
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKR 116 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkk 116 (386)
+.|.+|=+ -|-+--.|++||..++||++.|++||-..
T Consensus 31 ~~i~~L~~-MGF~~~~a~~AL~~~~~n~e~Av~~Lls~ 67 (73)
T d1wiva_ 31 SSVDTLLS-FGFAEDVARKALKASGGDIEKATDWVFNN 67 (73)
T ss_dssp HHHHHHHH-HTCCHHHHHHHHHHTTSCHHHHHHHHHHS
T ss_pred HHHHHHHh-cCCCHHHHHHHHHHcCCCHHHHHHHHHcC
Confidence 66777764 68999999999999999999999999864
No 20
>d2bwba1 a.5.2.1 (A:328-371) DSK2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=94.70 E-value=0.021 Score=38.66 Aligned_cols=36 Identities=19% Similarity=0.174 Sum_probs=28.2
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHH
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELR 114 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LR 114 (386)
.-+.+||++-=.---.|-+||..++||++.|++.|-
T Consensus 7 ~QL~qL~~MGF~d~~~Ni~AL~~t~GdV~~Aie~Ll 42 (44)
T d2bwba1 7 HQLRQLNDMGFFDFDRNVAALRRSGGSVQGALDSLL 42 (44)
T ss_dssp HHHHHHHHTTCCCHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHcCCCcHHHHHHHHHHcCCCHHHHHHHHh
Confidence 345667766444556799999999999999999873
No 21
>d1efub2 d.43.1.1 (B:140-282) Elongation factor Ts (EF-Ts), dimerisation domain {Escherichia coli [TaxId: 562]}
Probab=94.64 E-value=0.038 Score=46.16 Aligned_cols=37 Identities=11% Similarity=0.089 Sum_probs=28.8
Q ss_pred cEEEEecC-CeEEEEEEeccccceecchHHHHHHHHHHHHHHhhcCC
Q 016633 133 LLALAQNE-SKAAVIELNCETDFVSRNEIFQYLALALAKQALVAENV 178 (386)
Q Consensus 133 lV~~~~~~-~~aalvElNCETDFVArN~~F~~la~~ia~~~l~~~~~ 178 (386)
+|+.|+++ +.||||+++|++ ..|+++||.++....+.
T Consensus 2 vi~sYiH~gkigvlV~~~~~~---------~e~ak~iAMHIAA~~P~ 39 (143)
T d1efub2 2 VLGSYQHGARIGVLVAAKGAD---------EELVKHIAMHVAASKPE 39 (143)
T ss_dssp EEEEEEETTTEEEEEEEESCC---------HHHHHHHHHHHHHHCCS
T ss_pred eEEEEecCCEEEEEEEecCcc---------HHHHHHHHHHHhccCCc
Confidence 46777754 569999999975 47899999998877654
No 22
>d2dnaa1 a.5.2.1 (A:12-61) Ubiquilin-like protein Ubqlnl {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.63 E-value=0.03 Score=38.83 Aligned_cols=38 Identities=21% Similarity=0.181 Sum_probs=31.6
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHH
Q 016633 78 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRK 115 (386)
Q Consensus 78 ~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRk 115 (386)
-.-+.+||++-=.---.|-+||..++||++.|++.|..
T Consensus 9 ~~QL~qL~~MGF~d~~~Ni~AL~~t~GdV~~Aie~Ll~ 46 (50)
T d2dnaa1 9 SKEMECLQAMGFVNYNANLQALIATDGDTNAAIYKLKS 46 (50)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 34677888875556678999999999999999999875
No 23
>d1wj7a1 a.5.2.1 (A:8-98) Ubiquitin-associated protein 2-like Ubap2l {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.31 E-value=0.038 Score=42.70 Aligned_cols=40 Identities=28% Similarity=0.390 Sum_probs=37.0
Q ss_pred HHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHcc
Q 016633 78 VNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRG 117 (386)
Q Consensus 78 ~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkkG 117 (386)
=+.||+|.+.||.+--+|-=||-.||+|++.|+..|-+-+
T Consensus 33 ~~kVkql~e~T~rsede~~~ALhDcn~D~~~AIn~lLEg~ 72 (91)
T d1wj7a1 33 EEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGN 72 (91)
T ss_dssp HHHHHHHHHHTCCCHHHHHHHHHHHTSCHHHHHHHHHTCS
T ss_pred HHHHHHHHHHhCCCHHHHHHHHhcCCccHHHHHHHHHhcC
Confidence 3589999999999999999999999999999999998743
No 24
>d1veja1 a.5.2.1 (A:8-68) 4931431F19Rik {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.11 E-value=0.036 Score=39.97 Aligned_cols=36 Identities=31% Similarity=0.245 Sum_probs=30.2
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHH
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELR 114 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LR 114 (386)
.-+.+||++==.---.|-+||..++||++.|+++|-
T Consensus 24 ~QL~qL~eMGF~d~~~Nl~AL~~t~Gdv~~Aie~Ll 59 (61)
T d1veja1 24 QELEELKALGFANRDANLQALVATDGDIHAAIEMLL 59 (61)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHH
T ss_pred HHHHHHHHcCCCCHHHHHHHHHHcCCCHHHHHHHHh
Confidence 567888887545567899999999999999999984
No 25
>d1oaia_ a.5.2.3 (A:) FG-binding, C-terminal domain of TAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=94.07 E-value=0.056 Score=38.57 Aligned_cols=39 Identities=18% Similarity=0.371 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHH
Q 016633 76 EQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELR 114 (386)
Q Consensus 76 ~~~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LR 114 (386)
++.++|.++-.+||.-.-=|.+.|+++|||++.|+....
T Consensus 6 ~Qq~mv~~~s~~T~mn~e~s~~cLe~~~Wd~~~A~~~F~ 44 (59)
T d1oaia_ 6 EQQEMLQAFSTQSGMNLEWSQKCLQDNNWDYTRSAQAFT 44 (59)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHTTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCHHHHHHHHHHcCCCHHHHHHHHH
Confidence 456899999999999999999999999999999998865
No 26
>d1whca_ a.5.2.1 (A:) UBA/UBX 33.3 kDa protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.93 E-value=0.028 Score=40.77 Aligned_cols=37 Identities=27% Similarity=0.218 Sum_probs=31.9
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcCC-CHHHHHHHHHHc
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCDW-DIEAALKELRKR 116 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~ng-DiekAi~~LRkk 116 (386)
++|++|=+ -|.+--.|++||..++| |+|.|++||-..
T Consensus 11 ~~l~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~Wl~~h 48 (64)
T d1whca_ 11 TALESLIE-MGFPRGRAEKALALTGNQGIEAAMDWLMEH 48 (64)
T ss_dssp CHHHHHHT-TTCCHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHhCCCCHHHHHHHHHHC
Confidence 56777764 68999999999999976 899999999864
No 27
>d2crna1 a.5.2.1 (A:8-58) Suppressor of T-cell receptor signaling 2 (STS-2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.92 E-value=0.022 Score=39.56 Aligned_cols=36 Identities=25% Similarity=0.234 Sum_probs=29.5
Q ss_pred HHHHHHHhcCCCHHHHHHHHHhcC-CCHHHHHHHHHHc
Q 016633 80 LIKQLREQTSAPMKDVKLALVDCD-WDIEAALKELRKR 116 (386)
Q Consensus 80 lIK~LR~~Tgagm~dCKkAL~e~n-gDiekAi~~LRkk 116 (386)
+|.+|= .-|.+--.|+|||..++ +|++.|++||-..
T Consensus 5 ~v~~L~-~MGF~~~~a~~Al~~t~n~~ve~A~~Wl~~h 41 (51)
T d2crna1 5 LLEPLL-AMGFPVHTALKALAATGRKTAEEALAWLHDH 41 (51)
T ss_dssp SHHHHH-HTSCCHHHHHHHHHHHTSCCHHHHHHHHHHH
T ss_pred HHHHHH-HcCCCHHHHHHHHHHHCCCCHHHHHHHHHHc
Confidence 455555 36899999999999985 5999999999764
No 28
>d2g3qa1 a.5.2.1 (A:1339-1381) Endocytic protein Ede1, YBL047C {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=93.40 E-value=0.022 Score=38.12 Aligned_cols=32 Identities=31% Similarity=0.560 Sum_probs=25.6
Q ss_pred HHHhcCCCH--HHHHHHHHhcCCCHHHHHHHHHH
Q 016633 84 LREQTSAPM--KDVKLALVDCDWDIEAALKELRK 115 (386)
Q Consensus 84 LR~~Tgagm--~dCKkAL~e~ngDiekAi~~LRk 115 (386)
+++.+|-|+ -..++||+.+|||++.|..+|-.
T Consensus 8 i~eL~~MGF~e~~A~~AL~k~~wnleaAtN~LLd 41 (43)
T d2g3qa1 8 VEELSGMGFTEEEAHNALEKCNWDLEAATNFLLD 41 (43)
T ss_dssp HHHHHTTTSCHHHHHHHHHHHTSCHHHHHHHHHT
T ss_pred HHHHHhcCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 344566666 46899999999999999999853
No 29
>d1v92a_ a.5.2.3 (A:) NSFL1 (p97 ATPase) cofactor p47, UBA-like domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=92.99 E-value=0.1 Score=35.20 Aligned_cols=41 Identities=20% Similarity=0.423 Sum_probs=36.5
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHcc
Q 016633 77 QVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKRG 117 (386)
Q Consensus 77 ~~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkkG 117 (386)
+-++|.+....||+.--.++.=|+.++||++.|+..--..|
T Consensus 5 ~~~lI~qF~~iTg~~~~~A~~~Le~~~w~Le~Ai~~yfe~g 45 (46)
T d1v92a_ 5 RQDALREFVAVTGAEEDRARFFLESAGWDLQIALASFYEDG 45 (46)
T ss_dssp HHHHHHHHHHHTCCCHHHHHHHHHHTTSCSHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCcCHHHHHHHHHHcCCcHHHHHHHHHhcC
Confidence 34899999999999999999999999999999998765544
No 30
>d1vdla_ a.5.2.1 (A:) Ubiquitin carboxyl-terminal hydrolase 25 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=92.54 E-value=0.082 Score=39.34 Aligned_cols=39 Identities=28% Similarity=0.348 Sum_probs=32.9
Q ss_pred HHHHHHHHhcCCC-HHHHHHHHHhcCCCHHHHHHHHHHcc
Q 016633 79 NLIKQLREQTSAP-MKDVKLALVDCDWDIEAALKELRKRG 117 (386)
Q Consensus 79 ~lIK~LR~~Tgag-m~dCKkAL~e~ngDiekAi~~LRkkG 117 (386)
.++.+||+.||.- ..---.||..++||+..|+.+|-.+-
T Consensus 26 ~lLNQLrEITGIqD~q~L~~ALkas~Gdl~~AV~~LT~~~ 65 (80)
T d1vdla_ 26 TFLNQLREITGINDAQILQQALKDSNGNLELAVAFLTAKN 65 (80)
T ss_dssp HHHHHHHHHSCCCCHHHHHHHHHHHTSCHHHHHHHHHTTS
T ss_pred HHHHHHHHHhCCCcHHHHHHHHHhcCCCHHHHHHHHhcCC
Confidence 6899999999953 44456899999999999999998654
No 31
>d1veka_ a.5.2.1 (A:) Ubiquitin isopeptidase T {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=91.78 E-value=0.12 Score=39.12 Aligned_cols=38 Identities=16% Similarity=0.145 Sum_probs=32.4
Q ss_pred HHHHHHHHhcCCCHHHHHHHHHhcC-CCHHHHHHHHHHcc
Q 016633 79 NLIKQLREQTSAPMKDVKLALVDCD-WDIEAALKELRKRG 117 (386)
Q Consensus 79 ~lIK~LR~~Tgagm~dCKkAL~e~n-gDiekAi~~LRkkG 117 (386)
+.|.+|=+ -|.+--.|++||..++ +|++.|++||-...
T Consensus 31 ~~v~~L~~-MGF~~~~a~~AL~~t~n~~~e~A~~Wl~~h~ 69 (84)
T d1veka_ 31 EIVAQLVS-MGFSQLHCQKAAINTSNAGVEEAMNWLLSHM 69 (84)
T ss_dssp HHHHHHHH-HTCCHHHHHHHHHHTTTCCHHHHHHHHHHHT
T ss_pred HHHHHHHH-cCCCHHHHHHHHHHHcCCCHHHHHHHHHHcC
Confidence 67888875 6899999999999985 59999999998643
No 32
>d1dd3a2 d.45.1.1 (A:58-128) Ribosomal protein L7/12, C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=79.95 E-value=0.62 Score=34.17 Aligned_cols=26 Identities=27% Similarity=0.371 Sum_probs=22.7
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhc
Q 016633 77 QVNLIKQLREQTSAPMKDVKLALVDC 102 (386)
Q Consensus 77 ~~~lIK~LR~~Tgagm~dCKkAL~e~ 102 (386)
-+..||..|+-||.|+++.|+..+.+
T Consensus 13 KI~vIK~VR~it~lgLkEAK~lVe~~ 38 (71)
T d1dd3a2 13 KIQVIKVVREITGLGLKEAKDLVEKA 38 (71)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHTTT
T ss_pred chhHHHHHHHhcCCCHHHHHHHHHhc
Confidence 36899999999999999999887633
No 33
>d1ctfa_ d.45.1.1 (A:) Ribosomal protein L7/12, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=78.33 E-value=0.89 Score=33.01 Aligned_cols=27 Identities=26% Similarity=0.322 Sum_probs=24.1
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhcC
Q 016633 77 QVNLIKQLREQTSAPMKDVKLALVDCD 103 (386)
Q Consensus 77 ~~~lIK~LR~~Tgagm~dCKkAL~e~n 103 (386)
.+..||.+|.-||.|+++.|+..+.+.
T Consensus 13 Ki~vIK~VR~it~lgLkEAK~lVe~~P 39 (68)
T d1ctfa_ 13 KVAVIKAVRGATGLGLKEAKDLVESAP 39 (68)
T ss_dssp HHHHHHHHHHHHCCCHHHHHHHHHTCS
T ss_pred hhHHHHHHHHhcCCCHHHHHHHHHcCC
Confidence 579999999999999999998887763
No 34
>d2zjq51 d.45.1.1 (5:52-122) Ribosomal protein L7/12, C-terminal domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=74.76 E-value=0.88 Score=33.31 Aligned_cols=25 Identities=28% Similarity=0.450 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhcCCCHHHHHHHHHhc
Q 016633 77 QVNLIKQLREQTSAPMKDVKLALVDC 102 (386)
Q Consensus 77 ~~~lIK~LR~~Tgagm~dCKkAL~e~ 102 (386)
-+..||.+|..||.|+++.|+ |.+.
T Consensus 17 Ki~vIK~VR~it~LgLkeAK~-lVe~ 41 (71)
T d2zjq51 17 KINVIKEIRGITGLGLKEAKD-MSEK 41 (71)
T ss_pred hhhHHHHHHHhcCCCHHHHHh-hccC
Confidence 368999999999999999977 5554
No 35
>d1z96a1 a.5.2.1 (A:295-332) UBA-domain protein mud1 {Schizosaccharomyces pombe [TaxId: 4896]}
Probab=64.99 E-value=4.2 Score=25.21 Aligned_cols=32 Identities=25% Similarity=0.160 Sum_probs=25.1
Q ss_pred HHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHH
Q 016633 81 IKQLREQTSAPMKDVKLALVDCDWDIEAALKEL 113 (386)
Q Consensus 81 IK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~L 113 (386)
|.+|-. .|.--.+.-+||..+|||+|-|-.+|
T Consensus 6 iaqlvs-mgfdpleaaqaldaangdldvaasfl 37 (38)
T d1z96a1 6 IAQLVS-MGFDPLEAAQALDAANGDLDVAASFL 37 (38)
T ss_dssp HHHHHH-TTCCHHHHHHHHHHTTTCHHHHHHHH
T ss_pred HHHHHH-cCCCHHHHHHHHhhhcCcHHHHHHhh
Confidence 444433 46777889999999999999998776
No 36
>d1r8ea1 a.6.1.3 (A:3-120) Transcription activator BmrR {Bacillus subtilis [TaxId: 1423]}
Probab=57.17 E-value=6.6 Score=29.92 Aligned_cols=47 Identities=23% Similarity=0.409 Sum_probs=35.7
Q ss_pred eeccccCCCccchHHHHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHHHHHHc
Q 016633 63 ISRNFSDQAPAATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALKELRKR 116 (386)
Q Consensus 63 ~~r~~ss~~~~~~~~~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~~LRkk 116 (386)
..|.|+... ...+..|+.||+ +|.++.++|+-| +.+.+....+|.++
T Consensus 39 gyR~Y~~~~---l~~l~~I~~lr~-~g~sl~eIk~~l---~~~~~~~~~~l~~~ 85 (118)
T d1r8ea1 39 SYRYYTDSQ---LIHLDLIKSLKY-IGTPLEEMKKAQ---DLEMEELFAFYTEQ 85 (118)
T ss_dssp CCEEEETGG---GGHHHHHHHHHH-TTCCHHHHHHHT---TSCHHHHHHHHHHH
T ss_pred CcccccHHH---HHHHHHHHHHHH-cCCCHHHHHHHH---ccCHHHHHHHHHHH
Confidence 457888764 567899999986 899999999876 45666666766543
No 37
>d1r8da_ a.6.1.3 (A:) Multidrug transporter activator MtaN {Bacillus subtilis [TaxId: 1423]}
Probab=52.67 E-value=7.4 Score=29.22 Aligned_cols=45 Identities=27% Similarity=0.316 Sum_probs=35.2
Q ss_pred eeccccCCCccchHHHHHHHHHHHhcCCCHHHHHHHHHhcCCCHHHHHH
Q 016633 63 ISRNFSDQAPAATEQVNLIKQLREQTSAPMKDVKLALVDCDWDIEAALK 111 (386)
Q Consensus 63 ~~r~~ss~~~~~~~~~~lIK~LR~~Tgagm~dCKkAL~e~ngDiekAi~ 111 (386)
..|.|+... ...+..|+.||+ +|.|+-+.|+.|...+-|...+.+
T Consensus 37 gyR~Y~~~~---~~~l~~I~~lr~-~G~sl~eI~~~l~~~~~~~~~~l~ 81 (109)
T d1r8da_ 37 GYRLYSDAD---LERLQQILFFKE-IGFRLDEIKEMLDHPNFDRKAALQ 81 (109)
T ss_dssp CCEEBCHHH---HHHHHHHHHHHH-TTCCHHHHHHHHHCTTSCHHHHHH
T ss_pred ccccccHHH---HHHHHHHHHHHH-cCCCHHHHHHHHhccCccHHHHHH
Confidence 468888764 566889999996 899999999999887766554443
No 38
>d1wgla_ a.5.2.4 (A:) Toll-interacting protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=43.98 E-value=16 Score=25.22 Aligned_cols=37 Identities=14% Similarity=0.154 Sum_probs=29.4
Q ss_pred HHHHHHHHhc-CCCHHHHHHHHHhcCCCHHHHHHHHHH
Q 016633 79 NLIKQLREQT-SAPMKDVKLALVDCDWDIEAALKELRK 115 (386)
Q Consensus 79 ~lIK~LR~~T-gagm~dCKkAL~e~ngDiekAi~~LRk 115 (386)
+.|+.|+++- +.-----+--|.+++||+|.|++-|-.
T Consensus 11 e~i~~LkeMFP~~D~~vI~~VL~a~~G~vd~aid~LL~ 48 (59)
T d1wgla_ 11 EDLKAIQDMFPNMDQEVIRSVLEAQRGNKDAAINSLLQ 48 (59)
T ss_dssp HHHHHHHHHCSSSCHHHHHHHHTTTTTCHHHHHHHHHH
T ss_pred HHHHHHHHHCCCCCHHHHHHHHHHcCCCHHHHHHHHHh
Confidence 5688888883 344555678899999999999999865
No 39
>d1f1ua2 d.32.1.3 (A:148-323) Homoprotocatechuate 2,3-dioxygenase {Arthrobacter globiformis [TaxId: 1665]}
Probab=36.85 E-value=15 Score=29.54 Aligned_cols=52 Identities=10% Similarity=0.073 Sum_probs=38.8
Q ss_pred CHHHHHHHHHHcccccc-cccccccccCCcEEEEecCCeEEEEEEecccccee
Q 016633 105 DIEAALKELRKRGKVLA-SKKSSRTATEGLLALAQNESKAAVIELNCETDFVS 156 (386)
Q Consensus 105 DiekAi~~LRkkG~akA-~Kka~R~a~EGlV~~~~~~~~aalvElNCETDFVA 156 (386)
|++.+.+.|+++|.... ....+|...-+...+++.+-.|-+||+.|+.|-+.
T Consensus 77 ~v~~~~~~l~~~g~~~~~~~~p~~h~~g~~~~~Y~~DPdG~~iEl~~~~~~~~ 129 (176)
T d1f1ua2 77 NIIQICDKMGALRISDRIERGPGRHGVSNAFYLYILDPDGHRIEIYTQDYYTG 129 (176)
T ss_dssp HHHHHHHHHHHTTCGGGEEEEEEECSTTCCEEEEEECTTCCEEEEEECCCCCC
T ss_pred hHHHHHHHHHHcCCceeeeecccccCCCCceEEEEECCCCCEEEEEeCCcccc
Confidence 46777788999887543 33355665555678888888899999999988764
No 40
>d1jc4a_ d.32.1.4 (A:) Methylmalonyl-CoA epimerase {Propionibacterium shermanii [TaxId: 1752]}
Probab=29.67 E-value=14 Score=27.45 Aligned_cols=44 Identities=32% Similarity=0.324 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHcccccccccccccccCCcEEEEe--cCCeEEEEEE
Q 016633 104 WDIEAALKELRKRGKVLASKKSSRTATEGLLALAQ--NESKAAVIEL 148 (386)
Q Consensus 104 gDiekAi~~LRkkG~akA~Kka~R~a~EGlV~~~~--~~~~aalvEl 148 (386)
.|++++++.|+++|+.--.. ..+....|.-...+ .+..|.+|||
T Consensus 95 ~di~~~~~~l~~~Gv~~~~~-~~~~~~~g~~~~f~~p~dp~G~~iEl 140 (145)
T d1jc4a_ 95 DDIDAVSATLRERGVQLLYD-EPKLGTGGNRINFMHPKSGKGVLIEL 140 (145)
T ss_dssp SCHHHHHHHHHHHTCCBSCS-SCEECSSSCEEEEBCGGGGTTSCEEE
T ss_pred chHHHHHHHHHHCCCEEeCC-CceECCCCCEEEEEeccCCCCeEEEE
Confidence 49999999999999875433 23555667655555 4556888887
No 41
>d1r9ca_ d.32.1.2 (A:) Fosfomycin resistance protein FosX {Mesorhizobium loti [TaxId: 381]}
Probab=29.60 E-value=21 Score=26.21 Aligned_cols=48 Identities=21% Similarity=0.260 Sum_probs=30.8
Q ss_pred CCCHHHHHHHHHHcccccccccccccccCCcEEEEecCCeEEEEEEeccc
Q 016633 103 DWDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCET 152 (386)
Q Consensus 103 ngDiekAi~~LRkkG~akA~Kka~R~a~EGlV~~~~~~~~aalvElNCET 152 (386)
..|++++.+.|++.|..-... ..+.-..|. .+++.+--|-+|||.|.|
T Consensus 76 ~~dv~~~~~~l~~~gv~i~~~-~~~~~~~~~-~~~~~DPdGn~iEl~~~~ 123 (130)
T d1r9ca_ 76 DADFDRYAERVGKLGLDMRPP-RPRVEGEGR-SIYFYDDDNHMFELHTGT 123 (130)
T ss_dssp GGGHHHHHHHHHHHTCCBCCC-CC-----CC-EEEEECTTSCEEEEECCC
T ss_pred HHHHHHHHHHHHHCCCeEecC-CcccCCCEE-EEEEECCCCCEEEEEECC
Confidence 468999999999998764321 112222333 344556679999999987
No 42
>d1kw3b2 d.32.1.3 (B:133-288) 2,3-Dihydroxybiphenyl dioxygenase (DHBD, BPHC enzyme) {Pseudomonas sp. [TaxId: 306]}
Probab=29.13 E-value=24 Score=27.54 Aligned_cols=51 Identities=16% Similarity=0.228 Sum_probs=37.7
Q ss_pred CCHHHHHHHHHHcccccccccccccccCCcEEEEecCCeE-EEEEEecccccee
Q 016633 104 WDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKA-AVIELNCETDFVS 156 (386)
Q Consensus 104 gDiekAi~~LRkkG~akA~Kka~R~a~EGlV~~~~~~~~a-alvElNCETDFVA 156 (386)
.|+..|.++|+++|... --.+|-...+...+++.+-.| .-+|+.|+.+.+.
T Consensus 86 ddv~~~~d~l~~~G~~~--~g~~rH~~~~~~s~Y~~DP~G~~~~E~~~~~~~~d 137 (156)
T d1kw3b2 86 DDVGYAFDRLDAAGRIT--SLLGRHTNDQTLSFYADTPSPMIEVEFGWGPRTVD 137 (156)
T ss_dssp HHHHHHHHHHHHTTCBC--BCSEEESSSCCEEEEEECSSTTCEEEEEECCCBCC
T ss_pred HHHHHHHHHHHhcCCce--ecCcccCCCCeEEEEEECCCCCeEEEEecCCcccC
Confidence 36778889999999743 236777666778888866555 3589999987763
No 43
>d1umqa_ a.4.1.12 (A:) Photosynthetic apparatus regulatory protein PprA (RegA), DNA-binding domain {Rhodobacter sphaeroides [TaxId: 1063]}
Probab=27.73 E-value=18 Score=24.57 Aligned_cols=19 Identities=16% Similarity=0.410 Sum_probs=17.2
Q ss_pred HHHHHHhcCCCHHHHHHHH
Q 016633 95 VKLALVDCDWDIEAALKEL 113 (386)
Q Consensus 95 CKkAL~e~ngDiekAi~~L 113 (386)
--+||.+|+||+.+|-+.|
T Consensus 25 I~~aL~~~~gn~~~aA~~L 43 (60)
T d1umqa_ 25 IQRIYEMCDRNVSETARRL 43 (60)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCcHHHHHHHH
Confidence 5689999999999999887
No 44
>d1mpya1 d.32.1.3 (A:1-145) Catechol 2,3-dioxygenase (metapyrocatechase) {Pseudomonas putida, mt2 [TaxId: 303]}
Probab=24.97 E-value=29 Score=25.95 Aligned_cols=52 Identities=10% Similarity=0.187 Sum_probs=36.5
Q ss_pred CHHHHHHHHHHcccccccccccccccCCcEEEEecCCeEEEEEEeccccceec
Q 016633 105 DIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNCETDFVSR 157 (386)
Q Consensus 105 DiekAi~~LRkkG~akA~Kka~R~a~EGlV~~~~~~~~aalvElNCETDFVAr 157 (386)
|++.+.+.|+++|...-.....+.-..| -.+++.+-.|-.|||-++.|.+.+
T Consensus 77 dl~~~~~~L~~~g~~~~~~~~~~~~g~~-~~~~f~DPdG~~iEl~~~~e~~~~ 128 (145)
T d1mpya1 77 ALRQLERDLMAYGCAVEQLPAGELNSCG-RRVRFQAPSGHHFELYADKEYTGK 128 (145)
T ss_dssp HHHHHHHHHHHHTCCCEEECTTSSTTBC-CEEEEECTTSCEEEEESCBCBCCS
T ss_pred HHHHHHHHHHHCCCcEEECCCcccCCce-EEEEEECCCCCEEEEEEeccccCC
Confidence 8999999999999764322222222223 366777778999999999998654
No 45
>d1xqaa_ d.32.1.2 (A:) Hypothetical protein BC3580 {Bacillus cereus [TaxId: 1396]}
Probab=23.93 E-value=29 Score=24.52 Aligned_cols=42 Identities=12% Similarity=0.260 Sum_probs=27.8
Q ss_pred CCHHHHHHHHHHcccccccccccccccCCcEEEEecCCeEEEEEEec
Q 016633 104 WDIEAALKELRKRGKVLASKKSSRTATEGLLALAQNESKAAVIELNC 150 (386)
Q Consensus 104 gDiekAi~~LRkkG~akA~Kka~R~a~EGlV~~~~~~~~aalvElNC 150 (386)
.|++++.++|++.|.....- .+ ..| -.+++.+-.|-+|||-|
T Consensus 72 ~~v~~~~~~l~~~G~~~~~~--~~--~~~-~~~~~~DPdG~~iEi~c 113 (113)
T d1xqaa_ 72 EQVDKINQRLKEDGFLVEPP--KH--AHA-YTFYVEAPGGFTIEVMC 113 (113)
T ss_dssp HHHHHHHHHHHHTTCCCCCC--EE--C-C-EEEEEEETTTEEEEEEC
T ss_pred cchhhhhhhHHHcCCccccC--CC--Cce-EEEEEECCCCCEEEEEC
Confidence 36788888899988753221 11 123 35566667899999998
No 46
>d2cosa1 a.5.2.1 (A:8-48) Serine/threonine protein kinase LATS2 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=20.60 E-value=35 Score=21.42 Aligned_cols=21 Identities=38% Similarity=0.344 Sum_probs=15.9
Q ss_pred HHHHHHhcC-CCHHHHHHHHHH
Q 016633 95 VKLALVDCD-WDIEAALKELRK 115 (386)
Q Consensus 95 CKkAL~e~n-gDiekAi~~LRk 115 (386)
.-.||..+| -++|.|++++.|
T Consensus 19 ~iral~qt~~rsieaaie~isk 40 (41)
T d2cosa1 19 AGRALKQTGSRSIEAALEYISK 40 (41)
T ss_dssp HHHHHHHHTSCCHHHHHHHHHH
T ss_pred HHHHHHHhCcccHHHHHHHHhc
Confidence 346777776 689999999865
Done!