Query 016634
Match_columns 385
No_of_seqs 252 out of 1431
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 16:53:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016634.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016634hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vla_A EDGP; extracellular, in 100.0 3.5E-45 1.2E-49 366.1 20.1 253 104-381 16-316 (413)
2 1b5f_A Protein (cardosin A); h 100.0 2.4E-44 8.1E-49 334.8 21.4 226 96-359 1-237 (239)
3 2x0b_A Renin; hydrolase-hormon 100.0 3.3E-43 1.1E-47 348.5 22.3 223 98-359 51-290 (383)
4 3psg_A Pepsinogen; hydrolase(a 100.0 9.1E-43 3.1E-47 344.0 24.5 225 97-359 45-280 (370)
5 2apr_A Rhizopuspepsin; hydrola 100.0 1.3E-42 4.4E-47 337.1 22.5 221 104-364 11-244 (325)
6 3aup_A SBG7S, BG, basic 7S glo 100.0 1.5E-42 5E-47 346.3 22.8 258 99-381 11-308 (403)
7 1tzs_A Cathepsin E; hydrolase, 100.0 1.7E-42 5.8E-47 339.7 22.3 227 96-360 11-250 (351)
8 1am5_A Pepsin, acid proteinase 100.0 2E-42 7E-47 335.4 21.7 238 99-380 3-250 (324)
9 1j71_A Candidapepsin, aspartic 100.0 6.1E-42 2.1E-46 333.5 23.3 227 99-362 4-242 (334)
10 1dpj_A Proteinase A; proteinas 100.0 4.4E-42 1.5E-46 333.8 22.2 223 98-359 3-239 (329)
11 2bju_A Plasmepsin II; aspartic 100.0 4.2E-42 1.4E-46 346.7 21.9 237 97-379 127-375 (453)
12 3cms_A Chymosin B; hydrolase, 100.0 6E-42 2.1E-46 332.1 22.1 224 98-359 4-237 (323)
13 1htr_B Gastricsin; aspartyl pr 100.0 6.1E-42 2.1E-46 332.8 21.4 237 100-380 5-254 (329)
14 1mpp_A Pepsin; hydrolase(acid 100.0 9E-42 3.1E-46 335.7 22.8 239 98-380 8-275 (361)
15 2qzx_A Candidapepsin-5; aspart 100.0 9.5E-42 3.2E-46 333.1 22.5 229 98-363 3-243 (342)
16 3k1w_A Renin; protease, altern 100.0 7.1E-42 2.4E-46 333.6 21.5 227 96-360 6-248 (341)
17 3c9x_A Trichoderma reesei aspa 100.0 2.9E-42 9.9E-47 335.2 17.9 218 104-358 11-239 (329)
18 4aa9_A Chymosin; hydrolase, as 100.0 7.6E-42 2.6E-46 330.6 20.2 223 99-359 2-234 (320)
19 1oew_A Endothiapepsin; hydrola 100.0 6.1E-42 2.1E-46 332.9 18.8 216 105-358 12-238 (329)
20 1qdm_A Prophytepsin; aspartic 100.0 4.4E-41 1.5E-45 342.0 23.1 226 97-360 41-281 (478)
21 1miq_A Plasmepsin; aspartic pr 100.0 5.4E-41 1.9E-45 331.9 20.5 234 98-379 52-299 (375)
22 3pvk_A Candidapepsin-2; hydrol 100.0 2.1E-40 7.3E-45 323.2 22.7 225 99-362 4-242 (342)
23 2ewy_A Beta-secretase 2; BACE2 100.0 1.5E-40 5.2E-45 329.3 21.7 240 101-381 6-271 (383)
24 3fv3_A SAPP1P-secreted asparti 100.0 3.6E-40 1.2E-44 321.4 23.1 231 99-379 4-260 (339)
25 2qp8_A Beta-secretase 1; BACE1 100.0 6.2E-40 2.1E-44 326.4 23.6 239 102-381 15-282 (395)
26 1t6e_X Xylanase inhibitor; two 100.0 4.1E-40 1.4E-44 326.3 19.1 245 100-381 5-286 (381)
27 3vf3_A Beta-secretase 1; struc 100.0 3.5E-39 1.2E-43 321.6 25.1 236 105-381 25-289 (402)
28 1yg9_A Aspartic protease BLA G 100.0 1.3E-39 4.6E-44 316.6 20.7 222 99-360 8-241 (330)
29 3qvc_A Histo-aspartic protease 100.0 1.4E-39 4.9E-44 328.3 21.1 218 97-358 126-357 (451)
30 1ibq_A Aspergillopepsin; aspar 100.0 1.2E-39 4.1E-44 316.2 19.7 213 106-359 12-235 (325)
31 3lpj_A Beta-secretase 1; alzhe 100.0 5E-39 1.7E-43 325.5 23.3 239 102-381 68-335 (455)
32 1izd_A Aspartic proteinase; su 100.0 3.5E-39 1.2E-43 312.7 19.5 212 106-359 13-235 (323)
33 1bxo_A Protein (penicillopepsi 100.0 3.9E-39 1.3E-43 312.4 14.8 211 106-359 13-234 (323)
34 1wkr_A Polyporopepsin; hydrola 100.0 7.6E-38 2.6E-42 305.2 22.4 207 99-361 4-235 (340)
35 1lya_A Cathepsin D; lysosomal 99.9 4.2E-23 1.4E-27 164.7 10.2 93 97-218 2-96 (97)
36 1lya_B Cathepsin D; lysosomal 99.9 1.4E-21 4.9E-26 181.0 15.1 133 227-360 3-148 (241)
37 1fmb_A EIAV protease; hydrolas 81.4 1.5 5.3E-05 34.2 4.2 26 110-137 9-34 (104)
38 2hs1_A HIV-1 protease; ultra-h 80.8 1.7 5.9E-05 33.7 4.2 26 111-138 10-35 (99)
39 3ec0_A Protease; HIV-2, inhibi 75.7 2.8 9.5E-05 32.5 4.0 26 111-138 10-35 (99)
40 3liy_A Protease; hydrolase, hy 74.3 3.1 0.00011 33.0 3.9 27 112-138 13-42 (116)
41 2hah_A Protease, retropepsin; 71.3 3.9 0.00013 32.6 3.9 23 114-138 18-40 (116)
42 2i1a_A DNA damage-inducible pr 70.9 4.4 0.00015 33.2 4.4 35 312-354 25-59 (148)
43 3s8i_A Protein DDI1 homolog 1; 68.3 4.5 0.00015 33.6 3.9 34 313-354 24-57 (148)
44 2i1a_A DNA damage-inducible pr 67.9 4.4 0.00015 33.2 3.8 30 107-138 24-53 (148)
45 3sqf_A Protease; folded monome 62.4 8.3 0.00028 30.6 4.2 25 112-138 12-36 (114)
46 3s8i_A Protein DDI1 homolog 1; 59.4 7.9 0.00027 32.0 3.8 29 109-139 24-52 (148)
47 1lya_A Cathepsin D; lysosomal 55.5 16 0.00054 27.7 4.7 32 312-349 13-44 (97)
48 1bxo_A Protein (penicillopepsi 51.9 16 0.00056 33.8 5.1 42 300-350 4-45 (323)
49 1ibq_A Aspergillopepsin; aspar 50.3 18 0.00062 33.5 5.2 42 300-350 3-44 (325)
50 3slz_A GAG-Pro-POL polyprotein 48.1 17 0.00059 29.5 4.0 27 110-138 23-49 (132)
51 1izd_A Aspartic proteinase; su 47.5 21 0.00073 33.0 5.2 42 300-350 4-45 (323)
52 2rsp_A RSV protease; hydrolase 45.3 18 0.0006 29.1 3.6 19 120-138 29-47 (124)
53 3ka2_A [L-Ala51;Gly51']HIV-1 p 42.3 22 0.00075 31.1 4.0 26 111-138 10-35 (203)
54 3c9x_A Trichoderma reesei aspa 39.8 36 0.0012 31.5 5.4 44 300-350 3-47 (329)
55 1oew_A Endothiapepsin; hydrola 37.7 41 0.0014 31.1 5.4 43 300-349 3-46 (329)
56 2apr_A Rhizopuspepsin; hydrola 37.1 34 0.0012 31.6 4.7 42 301-349 5-46 (325)
57 3slz_A GAG-Pro-POL polyprotein 27.4 49 0.0017 26.7 3.5 26 319-349 25-50 (132)
58 1wkr_A Polyporopepsin; hydrola 26.4 84 0.0029 29.0 5.6 40 300-348 3-42 (340)
59 3aup_A SBG7S, BG, basic 7S glo 26.3 69 0.0023 30.5 5.0 42 301-349 11-52 (403)
60 1b5f_A Protein (cardosin A); h 26.2 74 0.0025 27.8 4.9 40 302-349 5-44 (239)
61 3ka2_A [L-Ala51;Gly51']HIV-1 p 25.9 60 0.002 28.3 4.0 27 110-138 113-139 (203)
62 3fv3_A SAPP1P-secreted asparti 24.7 45 0.0015 30.8 3.3 32 312-349 12-43 (339)
63 1fmb_A EIAV protease; hydrolas 23.4 73 0.0025 24.5 3.7 29 318-351 10-38 (104)
64 1j71_A Candidapepsin, aspartic 22.6 52 0.0018 30.4 3.3 32 312-349 12-43 (334)
65 1dpj_A Proteinase A; proteinas 21.6 90 0.0031 28.6 4.7 41 301-349 4-44 (329)
66 3cms_A Chymosin B; hydrolase, 21.4 98 0.0034 28.3 4.9 41 301-349 5-45 (323)
67 3vla_A EDGP; extracellular, in 21.4 67 0.0023 30.9 3.8 42 300-348 9-50 (413)
68 2qzx_A Candidapepsin-5; aspart 21.2 58 0.002 30.1 3.3 32 312-349 12-43 (342)
69 1mpp_A Pepsin; hydrolase(acid 21.2 99 0.0034 28.7 4.9 41 301-349 9-49 (361)
70 3pvk_A Candidapepsin-2; hydrol 21.2 58 0.002 30.0 3.3 32 312-349 12-43 (342)
71 1am5_A Pepsin, acid proteinase 21.2 1.1E+02 0.0038 27.9 5.2 40 302-349 4-43 (324)
72 2hs1_A HIV-1 protease; ultra-h 20.5 79 0.0027 24.1 3.3 26 318-348 10-35 (99)
73 1yg9_A Aspartic protease BLA G 20.5 57 0.002 30.1 3.0 30 312-349 17-46 (330)
No 1
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=100.00 E-value=3.5e-45 Score=366.09 Aligned_cols=253 Identities=23% Similarity=0.369 Sum_probs=198.1
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCC-
Q 016634 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR- 182 (385)
Q Consensus 104 ~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~- 182 (385)
+..+.+||++|.||||||+|.|++||||+++||+|. .| .+|+||+.++|.++.|...
T Consensus 16 d~~~~~Y~~~i~iGTPpq~~~v~~DTGS~~lWv~c~--~c--------------------~~Sst~~~v~C~s~~C~~~~ 73 (413)
T 3vla_A 16 DASTLQYVTTINQRTPLVSENLVVDLGGRFLWVDCD--QN--------------------YVSSTYRPVRCRTSQCSLSG 73 (413)
T ss_dssp CTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--SS--------------------CCCTTCEECBTTSHHHHHTT
T ss_pred cCCCCeEEEEEEcCCCCcceEEEEeCCChhhhcccC--CC--------------------CCCCCcCccCCCcccccccc
Confidence 344678999999999999999999999999999993 33 2699999999999999753
Q ss_pred -CCC---CC------CCCCCceEEecC-CCCceEEEEEEEEEEEeccCCCCCCC-cccccceEEEEEEeccCCCCCCCCC
Q 016634 183 -SSC---KS------LKDPCPYIADYS-TEDTSSSGYLVDDILHLASFSKHAPQ-SSVQSSVIIGCGRKQTGSYLDGAAP 250 (385)
Q Consensus 183 -~~C---~~------~~~~c~~~~~Y~-~g~s~~~G~l~~Dtl~l~~~~~~~~~-~~~~~~~~fGc~~~~~g~~~~~~~~ 250 (385)
..| .+ .++.|.|.+.|+ ++ +++.|++++|+|+|+..++...+ ....+++.|||++.+.+... ..+.
T Consensus 74 ~~~~~~c~s~~~~~c~~~~c~~~i~Y~~d~-~~~~G~l~~Dtv~l~~~~g~~~~~~~~v~~~~FGc~~~~~~~g~-~~~~ 151 (413)
T 3vla_A 74 SIACGDCFNGPRPGCNNNTCGVFPENPVIN-TATGGEVAEDVVSVESTDGSSSGRVVTVPRFIFSCAPTSLLQNL-ASGV 151 (413)
T ss_dssp CCEEECCSSCCBTTBCSSEEEECCEETTTT-EECCEEEEEEEEEEEEECSSBEEEEEEEEEEEEEEECGGGGTTS-CTTC
T ss_pred cCCCcccccCCCCCCCCCcCcceeecCcCC-ceeeeEEEEEEEEecccCCCCcccceeeCCEEEECcccccccCc-cccc
Confidence 223 21 134699999994 64 68899999999999864332100 12457899999998742211 2367
Q ss_pred CeeeecCCCCCChHHHHHHcCCCCCceEEeecC--CCcceEEEcccCCCC----------ceeeeeeecCCC--------
Q 016634 251 DGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE--NDSGSVFFGDQGPAT----------QQSTSFLPIGEK-------- 310 (385)
Q Consensus 251 dGIlGLg~~~~S~~~~l~~~g~i~~~FS~cl~~--~~~G~l~fG~~d~~~----------~~~tp~v~~~~~-------- 310 (385)
|||||||++.+|+++||+++++++++|||||.+ +.+|.|+||+.+..+ ..+||++.....
T Consensus 152 dGIlGLg~~~lSl~sql~~~~~i~~~FS~cL~~~~~~~G~l~fGg~~~~~~p~~~~~g~~l~~tPl~~~~~~~~~~~~~~ 231 (413)
T 3vla_A 152 VGMAGLGRTRIALPSQFASAFSFKRKFAMCLSGSTSSNSVIIFGNDPYTFLPNIIVSDKTLTYTPLLTNPVSTSATSTQG 231 (413)
T ss_dssp CEEEECSSSSSSHHHHHHHHHTCCSEEEEECCSCSSSCEEEEEESCCEEETTTEEECTTTSEEEECBCCSSCCSSSCCTT
T ss_pred ccccccCCCCcchHHHHhhhcCCCceEEEeCCCCCCCceEEEECCCcccccccccccCCceeEeecccCCcccccccccc
Confidence 999999999999999999998889999999987 357999999987531 345666543221
Q ss_pred --CccEEEeEeEEEEcCeEeecC----------CceEEEcCcccccccCHHHHHHHHHHHHHhhcc---ccccccccccc
Q 016634 311 --YDAYFVGVESYCIGNSCLTQS----------GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSS---KRISLQGNSWK 375 (385)
Q Consensus 311 --~~~y~v~l~~isVg~~~~~~~----------~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~---~~~~~~~~~~~ 375 (385)
+.+|+|+|++|+||++.+... ..++||||||++|+||+++|++|.++|.+++.+ ++.. ...+++
T Consensus 232 ~~~~~y~V~l~~IsVgg~~l~~~~~~~~~~~~g~~~aIiDSGTslt~lp~~~y~~l~~a~~~~~~~~~~~~~~-~~~~~~ 310 (413)
T 3vla_A 232 EPSVEYFIGVKSIKINSKIVALNTSLLSISSAGLGGTKISTINPYTVLETSIYKAVTEAFIKESAARNITRVA-SVAPFG 310 (413)
T ss_dssp CCCCSCEECCCEEEETTEEECCCGGGTSBCTTSCBCEEECSSSSSEEEEHHHHHHHHHHHHHHHHHTTCCEEC-CCTTCS
T ss_pred CCCceEEEEEEEEEECCEEccCCchhcccccCCCCCEEEECCCCcEEcCHHHHHHHHHHHHHHhcccCCCcCC-CCCCCc
Confidence 269999999999999988632 368999999999999999999999999998863 2222 234689
Q ss_pred cccccc
Q 016634 376 YCYNAR 381 (385)
Q Consensus 376 ~Cy~~s 381 (385)
.||+.+
T Consensus 311 ~C~~~~ 316 (413)
T 3vla_A 311 ACFSTD 316 (413)
T ss_dssp CEEECT
T ss_pred ceeccC
Confidence 999876
No 2
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=100.00 E-value=2.4e-44 Score=334.82 Aligned_cols=226 Identities=27% Similarity=0.436 Sum_probs=188.0
Q ss_pred CCceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccC
Q 016634 96 GSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (385)
Q Consensus 96 g~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C 174 (385)
|+..+++.|+.+.+||++|.||||||+|.|+|||||+++||+|. |..| ..| ..++.|+|++|+|++..
T Consensus 1 ~~~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~~--~~C-------~~~~~y~~~~SsT~~~~-- 69 (239)
T 1b5f_A 1 GSAVVALTNDRDTSYFGEIGIGTPPQKFTVIFDTGSSVLWVPSSKCINS--KAC-------RAHSMYESSDSSTYKEN-- 69 (239)
T ss_dssp CCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCSC--HHH-------HTSCCBCGGGCTTCEEE--
T ss_pred CCceeeeeecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEEcCCCCCC--ccc-------CCCCCCCCccCCCeeeC--
Confidence 34568899999999999999999999999999999999999995 5411 112 12478999999999984
Q ss_pred CCcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeee
Q 016634 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVM 254 (385)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIl 254 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+..+.....||||
T Consensus 70 ----------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~f~~~~~~Gil 123 (239)
T 1b5f_A 70 ----------------GTFGAIIYGTG--SITGFFSQDSVTIGDL--------VVKEQDFIEATDEADNVFLHRLFDGIL 123 (239)
T ss_dssp ----------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTTCSCCEEE
T ss_pred ----------------CcEEEEEECCC--cEEEEEEEEEEEECCc--------EEccEEEEEEEeccCccccccCcceEE
Confidence 48999999997 5799999999999875 568999999998765322334679999
Q ss_pred ecCCCCCChHH--HHHHcCCC-CCceEEeecCC----CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCe
Q 016634 255 GLGLGDVSVPS--LLAKAGLI-QNSFSICFDEN----DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNS 326 (385)
Q Consensus 255 GLg~~~~S~~~--~l~~~g~i-~~~FS~cl~~~----~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~ 326 (385)
|||++.++.|. +|+++|++ +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+||++
T Consensus 124 GLg~~~~s~p~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~ 202 (239)
T 1b5f_A 124 GLSFQTISVPVWYNMLNQGLVKERRFSFWLNRNVDEEEGGELVFGGLDPNHFRGDHTYVPVTYQ-YYWQFGIGDVLIGDK 202 (239)
T ss_dssp ECSCCSSSCCHHHHHHHTTCCSSSEEEEEECCSCSSSCCEEEEETSCCGGGEEEEEEEEEEEEE-TTEEEEECCEEETTE
T ss_pred ecCccccccHHHHHHHHCCCCCCCEEEEEEeCCCCCCCCeEEEECCcChhhccCceEEEEcccC-CeEEEEeeEEEECCE
Confidence 99999988654 48899998 79999999863 46999999999876 467777777654 799999999999999
Q ss_pred Eee--cCCceEEEcCcccccccCHHHHHHHHHHHH
Q 016634 327 CLT--QSGFQALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 327 ~~~--~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
.+. .....+||||||++++||+++|++|.++|.
T Consensus 203 ~~~~~~~~~~aiiDTGTt~~~lP~~~~~~i~~~ig 237 (239)
T 1b5f_A 203 STGFCAPGCQAFADSGTSLLSGPTAIVTQINHAIG 237 (239)
T ss_dssp ECCTTTTCEEEEECTTCSSEEECHHHHHHHHHHTT
T ss_pred EecccCCCCEEEEecCcchhhCCHHHHHHHHHHhC
Confidence 874 346789999999999999999988876653
No 3
>2x0b_A Renin; hydrolase-hormone complex, hydrolase hormone complex, vasoconstrictor, glycoprotein, hypertension, serpins; 4.33A {Homo sapiens}
Probab=100.00 E-value=3.3e-43 Score=348.46 Aligned_cols=223 Identities=25% Similarity=0.418 Sum_probs=190.7
Q ss_pred ceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCC--CCcccccccCCCCCCCCCCCCCCCccccCC
Q 016634 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAP--LSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (385)
Q Consensus 98 ~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~--~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~ 175 (385)
..+++.|+.+.+||++|.||||||+|.|+|||||+++||+|. .|.. ..|. .++.|||++|+||+..
T Consensus 51 ~~~~l~n~~~~~Y~~~I~IGTP~Q~f~vi~DTGSs~lWV~s~--~C~~~~~~C~-------~~~~y~~~~SsT~~~~--- 118 (383)
T 2x0b_A 51 SSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSS--KCSRLYTACV-------YHKLFDASDSSSYKHN--- 118 (383)
T ss_dssp CEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TSCTTSHHHH-------TSCCBCGGGCTTCEEE---
T ss_pred ceEeeeecCCCEEEEEEEECCCCcEEEEEEeCCCCCeEEecc--CCCCCccccc-------CCCCCCCCCCCcEEEC---
Confidence 458898999999999999999999999999999999999995 4432 1221 3578999999999984
Q ss_pred CcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeee
Q 016634 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (385)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+ +.|||++.+.+..+....+|||||
T Consensus 119 ---------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~g~~f~~~~~dGIlG 172 (383)
T 2x0b_A 119 ---------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TVT-QMFGEVTEMPALPFMLAEFDGVVG 172 (383)
T ss_dssp ---------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECCHHHHTTCSSSEEEE
T ss_pred ---------------CcEEEEEcCCc--cEEEEEEeeEEEEcCc--------eEE-EEEEEEEecCCcccccCCCceEec
Confidence 49999999997 5899999999999875 456 999999998775444457899999
Q ss_pred cCCCCCCh------HHHHHHcCCC-CCceEEeecCC------CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEE
Q 016634 256 LGLGDVSV------PSLLAKAGLI-QNSFSICFDEN------DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESY 321 (385)
Q Consensus 256 Lg~~~~S~------~~~l~~~g~i-~~~FS~cl~~~------~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~i 321 (385)
||++.+++ ..+|++||++ +++||+||+++ ..|.|+||++|+.+ .+++.|+|+... .+|+|.|++|
T Consensus 173 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~~~G~l~fGg~d~~~y~G~l~~~pv~~~-~~w~v~l~~i 251 (383)
T 2x0b_A 173 MGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKGV 251 (383)
T ss_dssp CSCGGGCGGGCCCHHHHHHTTTCCSSSEEEEEECCSCC----CCEEEEESSCCGGGEEEEEEEEEBSST-TSCEEEECEE
T ss_pred cCCCccccCCCCcHHHHHHhCCCCCCCEEEEEEcCCCCcccCCCcEEEECCcChHHcCCceEEEEcCCC-ceEEEEEeEE
Confidence 99988764 4569999998 79999999875 27999999999986 578999998775 8999999999
Q ss_pred EEcCeEe-ecCCceEEEcCcccccccCHHHHHHHHHHHH
Q 016634 322 CIGNSCL-TQSGFQALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 322 sVg~~~~-~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
+||++.+ ...++.+||||||++++||+++|++|.++|.
T Consensus 252 ~v~~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~ 290 (383)
T 2x0b_A 252 SVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALG 290 (383)
T ss_dssp EESSCCCBSTTCEEEEECTTCSSEEECHHHHHHHHHHHT
T ss_pred EeCCceEEcCCCcEEEEcCCCceEEcCHHHHHHHHHHhC
Confidence 9999874 3467789999999999999999988877764
No 4
>3psg_A Pepsinogen; hydrolase(acid proteinase zymogen); 1.65A {Sus scrofa} SCOP: b.50.1.2 PDB: 2psg_A 4pep_A* 3pep_A* 1f34_A* 1psa_A* 1yx9_A 5pep_A 1flh_A 1qrp_E* 1psn_A* 1pso_E* 3utl_A
Probab=100.00 E-value=9.1e-43 Score=344.04 Aligned_cols=225 Identities=27% Similarity=0.437 Sum_probs=191.5
Q ss_pred CceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCC
Q 016634 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (385)
Q Consensus 97 ~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~ 176 (385)
...+++.|+.+.+||++|.||||||+|.|++||||+++||+|. .|....|. .++.|+|++|+||+..
T Consensus 45 ~~~~~l~n~~d~~Y~~~i~iGTPpQ~~~v~~DTGSs~lWV~s~--~C~~~~C~-------~~~~y~~~~SsT~~~~---- 111 (370)
T 3psg_A 45 IGDEPLENYLDTEYFGTIGIGTPAQDFTVIFDTGSSNLWVPSV--YCSSLACS-------DHNQFNPDDSSTFEAT---- 111 (370)
T ss_dssp SCCCTTGGGTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGGGT-------TSCCBCGGGCTTCEEE----
T ss_pred cceecceeccCCEEEEEEEEcCCCCEEEEEEeCCCCccEEECC--CCCCcccC-------CCCCCCCccCcCcEEC----
Confidence 3467899999999999999999999999999999999999995 44333332 3689999999999985
Q ss_pred cCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeec
Q 016634 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (385)
Q Consensus 177 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+.++.....||||||
T Consensus 112 --------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~~~~~~~dGIlGL 167 (370)
T 3psg_A 112 --------------SQELSITYGTG--SMTGILGYDTVQVGGI--------SDTNQIFGLSETEPGSFLYYAPFDGILGL 167 (370)
T ss_dssp --------------EEEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEEC
T ss_pred --------------CcEEEEEeCCc--eEEEEEEEEEEeeCCc--------ccCCeEEEEEEeecccccccCCccceecc
Confidence 48999999997 5899999999999885 67899999999887755555578999999
Q ss_pred CCCCCCh------HHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCe
Q 016634 257 GLGDVSV------PSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNS 326 (385)
Q Consensus 257 g~~~~S~------~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~ 326 (385)
|++.++. ..+|+++|+| +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|+|++|+||++
T Consensus 168 g~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~g~l~~~pv~~~-~~w~v~l~~i~v~g~ 246 (370)
T 3psg_A 168 AYPSISASGATPVFDNLWDQGLVSQDLFSVYLSSNDDSGSVVLLGGIDSSYYTGSLNWVPVSVE-GYWQITLDSITMDGE 246 (370)
T ss_dssp SCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEEC-----CEEEEETCCCGGGBSSCCEEEECSEE-TTEEEEECEEESSSS
T ss_pred CCccccccCCCCHHHHHHHCCCCCCCEEEEEEccCCCCCeEEEEEeeChHhcCCcceeeccccc-ceeEEEEeEEEECCE
Confidence 9987654 5669999999 79999999875 57999999999986 578888888765 899999999999998
Q ss_pred Eee-cCCceEEEcCcccccccCHHHHHHHHHHHH
Q 016634 327 CLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 327 ~~~-~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
.+. ...+.+||||||++++||+++|++|.++|.
T Consensus 247 ~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~ 280 (370)
T 3psg_A 247 TIACSGGCQAIVDTGTSLLTGPTSAIANIQSDIG 280 (370)
T ss_dssp EEECTTCEEEEECTTCCSEEEEHHHHHHHHHHTT
T ss_pred EEecCCCceEEEcCCCCcEECCHHHHHHHHHHhC
Confidence 775 357789999999999999999988876653
No 5
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=100.00 E-value=1.3e-42 Score=337.13 Aligned_cols=221 Identities=25% Similarity=0.470 Sum_probs=187.9
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCC
Q 016634 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (385)
Q Consensus 104 ~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~ 182 (385)
+..+..|+++|.||||+|+|.|++||||+++||+|. |..| .+ .++.|+|++|+|++..
T Consensus 11 ~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~c-~~----------~~~~y~~~~SsT~~~~---------- 69 (325)
T 2apr_A 11 YGNDIEYYGQVTIGTPGKKFNLDFDTGSSDLWIASTLCTNC-GS----------GQTKYDPNQSSTYQAD---------- 69 (325)
T ss_dssp ETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCSSC-CT----------TSCCBCGGGCTTCEEE----------
T ss_pred cCCCCEEEEEEEECCCCeEEEEEEcCCCCCEEEccCCCchH-hc----------CCCCCCcccCCCeeeC----------
Confidence 456789999999999999999999999999999997 8777 21 2578999999999983
Q ss_pred CCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC
Q 016634 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS 262 (385)
Q Consensus 183 ~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S 262 (385)
.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++.+.+.|... ..|||||||++.++
T Consensus 70 --------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~f~~~-~~~GilGLg~~~~s 131 (325)
T 2apr_A 70 --------GRTWSISYGDG-SSASGILAKDNVNLGGL--------LIKGQTIELAKREAASFASG-PNDGLLGLGFDTIT 131 (325)
T ss_dssp --------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTS-SCSEEEECSCGGGC
T ss_pred --------CCEEEEEECCC-CCEEEEEEEEEEEECCE--------EECcEEEEEEeccCcccccC-CCceEEEeCCcccc
Confidence 49999999996 67899999999999875 56899999999877655433 47999999998764
Q ss_pred -------hHHHHHHcCCC-CCceEEeecC---CCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEeec
Q 016634 263 -------VPSLLAKAGLI-QNSFSICFDE---NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQ 330 (385)
Q Consensus 263 -------~~~~l~~~g~i-~~~FS~cl~~---~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~ 330 (385)
++.+|+++|++ +++||+||.+ ...|.|+||++|+.+ .+.+.|+|+.....+|.|.|++|+||+ .+..
T Consensus 132 ~~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~vg~-~~~~ 210 (325)
T 2apr_A 132 TVRGVKTPMDNLISQGLISRPIFGVYLGKAKNGGGGEYIFGGYDSTKFKGSLTTVPIDNSRGWWGITVDRATVGT-STVA 210 (325)
T ss_dssp SSTTCCCHHHHHHHTTSCSSSEEEEEECCGGGTCCEEEEETCCCGGGBCSCCEEEECBCTTSSCEEEECEEEETT-EEEE
T ss_pred cccCCCCHHHHHHhcCCCCCceEEEEecCCCCCCCCEEEEccCCchhccCceEEEEccCCCCEEEEEEeEEEECC-EecC
Confidence 56789999988 8999999954 467999999999876 467777777544479999999999999 4555
Q ss_pred CCceEEEcCcccccccCHHHHHHHHHHHHHhhcc
Q 016634 331 SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSS 364 (385)
Q Consensus 331 ~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~ 364 (385)
..+.+||||||++++||+++|++|+++|.+++..
T Consensus 211 ~~~~~iiDSGTs~~~lP~~~~~~~~~~~~~~~~~ 244 (325)
T 2apr_A 211 SSFDGILDTGTTLLILPNNIAASVARAYGASDNG 244 (325)
T ss_dssp CCEEEEECTTCSSEEEEHHHHHHHHHHHTCEECS
T ss_pred CCceEEEecCCccEECCHHHHHHHHHHHhcccCC
Confidence 6789999999999999999999999999877653
No 6
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=100.00 E-value=1.5e-42 Score=346.25 Aligned_cols=258 Identities=21% Similarity=0.375 Sum_probs=196.3
Q ss_pred eeEec-cccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 016634 99 THFFG-NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (385)
Q Consensus 99 ~~~~~-~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~ 177 (385)
.+|+. |..+.+||++|.||||||+|.|+|||||+++||+|. . +.+|+|++.++|.++
T Consensus 11 ~~pl~~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~--------------------~~~Sst~~~~~C~s~ 68 (403)
T 3aup_A 11 VLPVQNDGSTGLHWANLQKRTPLMQVPVLVDLNGNHLWVNCE--Q--------------------QYSSKTYQAPFCHST 68 (403)
T ss_dssp EEEEEECTTTCCEEEEEEETTTTEEEEEEEETTCSSEEEECS--S--------------------CCCCSSCBCCCTTBH
T ss_pred EEeeecCCCCceEEEEEECCCCCceeEEEEECCCCceeECCC--C--------------------CCCCCCCCccCCCCc
Confidence 47777 777889999999999999999999999999999993 2 246999999999999
Q ss_pred CCCCCC--CC---CCC------CCCCceEEecC-CCCceEEEEEEEEEEEeccCCCCC---CCcccccceEEEEEEeccC
Q 016634 178 LCKSRS--SC---KSL------KDPCPYIADYS-TEDTSSSGYLVDDILHLASFSKHA---PQSSVQSSVIIGCGRKQTG 242 (385)
Q Consensus 178 ~C~~~~--~C---~~~------~~~c~~~~~Y~-~g~s~~~G~l~~Dtl~l~~~~~~~---~~~~~~~~~~fGc~~~~~g 242 (385)
.|.... .| .++ .+.|.|.+.|+ ++ +.+.|.+++|+|+|++.++.. ......+++.|||++.+.+
T Consensus 69 ~C~~~~~~~c~~c~~~~~s~~~~~~~~~~~~Y~~d~-~~~~G~~~~Dtv~ig~~~g~~~~~~~~~~v~~~~Fg~~~~~~~ 147 (403)
T 3aup_A 69 QCSRANTHQCLSCPAASRPGCHKNTCGLMSTNPITQ-QTGLGELGEDVLAIHATQGSTQQLGPLVTVPQFLFSCAPSFLV 147 (403)
T ss_dssp HHHHTTCCCEEECSSSCBTTBCSSEEEEEEEETTTT-EEEEEEEEEEEEEEEECCC----CCCEEEEEEEEEEEECGGGG
T ss_pred cccCccccCccccCCCCCCCCCCCcceeEeecCCCC-ceeeEEEEEEEEEecccCCccccccccccccCEEEECCccccc
Confidence 886421 22 111 24699999998 54 789999999999998743210 0012467899999998754
Q ss_pred C-CCCCCCCCeeeecCCCCCChHHHHHHcCCCCCceEEeecC--CCcceEEEcccCCCCc----e-----eeeeeecCCC
Q 016634 243 S-YLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDE--NDSGSVFFGDQGPATQ----Q-----STSFLPIGEK 310 (385)
Q Consensus 243 ~-~~~~~~~dGIlGLg~~~~S~~~~l~~~g~i~~~FS~cl~~--~~~G~l~fG~~d~~~~----~-----~tp~v~~~~~ 310 (385)
. +. ....|||||||++.++++.||++..+.+++||+||.+ +..|.|+||+ |+.+. + .+.|+|+...
T Consensus 148 ~~~~-~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~~~G~l~fGg-d~~~~~~~~G~~~~~~l~~~Pl~~~ 225 (403)
T 3aup_A 148 QKGL-PRNTQGVAGLGHAPISLPNQLASHFGLQRQFTTCLSRYPTSKGAIIFGD-APNNMRQFQNQDIFHDLAFTPLTIT 225 (403)
T ss_dssp SSSS-STTCCEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSCTTSCEEEEESC-HHHHC--CTTCCTTTTEEEEECEEC
T ss_pred ccCC-CCCCceEEECCCCCcCHHHHHHhhcCCCCeEEEEcCCCCCCCeeEEECC-CchhccccccccccCceeecccccC
Confidence 4 32 2467999999999999999997655558999999987 4679999999 65322 2 3444443221
Q ss_pred -CccEEEeEeEEEEcCeEe-ec-CC---------ceEEEcCcccccccCHHHHHHHHHHHHHhhcccccccccccccccc
Q 016634 311 -YDAYFVGVESYCIGNSCL-TQ-SG---------FQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCY 378 (385)
Q Consensus 311 -~~~y~v~l~~isVg~~~~-~~-~~---------~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy 378 (385)
..+|+|+|++|+||++.+ .. .. ..+||||||++++||+++|++|.++|.++++..........+++||
T Consensus 226 ~~~~y~v~l~~i~v~g~~~~~~~~~~~~~~~~g~~~aiiDSGTt~~~lp~~~~~~l~~~i~~~~~~~~~~~~~~~~~~c~ 305 (403)
T 3aup_A 226 LQGEYNVRVNSIRINQHSVFPLNKISSTIVGSTSGGTMISTSTPHMVLQQSVYQAFTQVFAQQLPKQAQVKSVAPFGLCF 305 (403)
T ss_dssp TTSCEEECEEEEEETTEEEECC------------CCEEECSSCSSEEECHHHHHHHHHHHHHTSCGGGEECCCTTCSCEE
T ss_pred CCCcceEEEEEEEECCEEcccCChhHeeeccCCCCCEEEECCCccEEeCHHHHHHHHHHHHHHhccccccCCCCCCCceE
Confidence 269999999999999988 42 22 2499999999999999999999999998886532222223577999
Q ss_pred ccc
Q 016634 379 NAR 381 (385)
Q Consensus 379 ~~s 381 (385)
+-+
T Consensus 306 ~c~ 308 (403)
T 3aup_A 306 NSN 308 (403)
T ss_dssp CGG
T ss_pred ECC
Confidence 765
No 7
>1tzs_A Cathepsin E; hydrolase, aspartic protease, activation intermediate; 2.35A {Homo sapiens}
Probab=100.00 E-value=1.7e-42 Score=339.73 Aligned_cols=227 Identities=23% Similarity=0.393 Sum_probs=189.2
Q ss_pred CCceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCC
Q 016634 96 GSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (385)
Q Consensus 96 g~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~ 175 (385)
....+++.|+.+..|+++|.||||+|+|.|++||||+++||+|. .|....|. .++.|||++|+|++.
T Consensus 11 ~~~~~~l~n~~~~~Y~~~i~iGtP~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~---- 77 (351)
T 1tzs_A 11 QSAKEPLINYLDMEYFGTISIGSPPQNFTVIFDTGSSNLWVPSV--YCTSPACK-------THSRFQPSQSSTYSQ---- 77 (351)
T ss_dssp ---CCTTGGGSSSCCCEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSGGGT-------TSCCBCGGGCTTCBC----
T ss_pred CccceeceecCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCccccC-------CCCcCCcccCcceEE----
Confidence 33457788888899999999999999999999999999999995 34322221 357899999999997
Q ss_pred CcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeee
Q 016634 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (385)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (385)
..|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+..+.....|||||
T Consensus 78 --------------~~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilG 133 (351)
T 1tzs_A 78 --------------PGQSFSIQYGTG--SLSGIIGADQVSVEGL--------TVVGQQFGESVTEPGQTFVDAEFDGILG 133 (351)
T ss_dssp --------------CSCEEEEESSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEECSCCCGGGGGCSCSEEEE
T ss_pred --------------CCCEEEEEeCCC--CeEEEEEEeEEEECCe--------EECCeEEEEEEeccccccccCCCceEEe
Confidence 359999999997 5899999999999875 5689999999987765444456799999
Q ss_pred cCCCCCC------hHHHHHHcCCC-CCceEEeecCCC----cceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEE
Q 016634 256 LGLGDVS------VPSLLAKAGLI-QNSFSICFDEND----SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (385)
Q Consensus 256 Lg~~~~S------~~~~l~~~g~i-~~~FS~cl~~~~----~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isV 323 (385)
||++.++ +..+|+++|++ +++||+||.++. .|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+|
T Consensus 134 Lg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 212 (351)
T 1tzs_A 134 LGYPSLAVGGVTPVFDNMMAQNLVDLPMFSVYMSSNPEGGAGSELIFGGYDHSHFSGSLNWVPVTKQ-AYWQIALDNIQV 212 (351)
T ss_dssp CSCGGGSGGGCCCHHHHHHHTTCCSSSEEEEECCCCC--CTTCEEEETSCCGGGBCSCCEEEECSEE-TTEEEEEEEEEE
T ss_pred cCCccccccCCCcHHHHHHHCCCCCCCEEEEEEcCCCCCCCCCEEEECCCCHHHcCCceEEEecCCC-ceEEEEeCEEEE
Confidence 9998766 45679999998 799999998753 7999999999876 467778777654 899999999999
Q ss_pred cCeEee-cCCceEEEcCcccccccCHHHHHHHHHHHHH
Q 016634 324 GNSCLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDK 360 (385)
Q Consensus 324 g~~~~~-~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~ 360 (385)
|++.+. .....+||||||++++||+++|++|.+++..
T Consensus 213 ~~~~~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~ 250 (351)
T 1tzs_A 213 GGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGA 250 (351)
T ss_dssp TTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred CCceEEcCCCceEEeccCCcceeCCHHHHHHHHHHhCC
Confidence 999853 4567899999999999999999988877643
No 8
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=100.00 E-value=2e-42 Score=335.43 Aligned_cols=238 Identities=24% Similarity=0.382 Sum_probs=194.2
Q ss_pred eeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 016634 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (385)
Q Consensus 99 ~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~ 178 (385)
.+++.|+.+..|+++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 3 ~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------ 67 (324)
T 1am5_A 3 TEQMKNEADTEYYGVISIGTPPESFKVIFDTGSSNLWVSSS--HCSAQACS-------NHNKFKPRQSSTYVET------ 67 (324)
T ss_dssp EEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEECBT--TCCSHHHH-------TSCCBCGGGCTTCEEE------
T ss_pred eeeeecCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEecC--CCCccccc-------CCCcCCCccCCCeEeC------
Confidence 46788888899999999999999999999999999999995 44322222 2478999999999985
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 016634 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (385)
Q Consensus 179 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (385)
.|.|.+.|++| +..|.+++|+|+|++. ..+++.|||++.+.+.++.....|||||||+
T Consensus 68 ------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 125 (324)
T 1am5_A 68 ------------GKTVDLTYGTG--GMRGILGQDTVSVGGG--------SDPNQELGESQTEPGPFQAAAPFDGILGLAY 125 (324)
T ss_dssp ------------EEEEEEECSSC--EEEEEEEEEEEESSSS--------CEEEEEEEEEEECCSTTTTTCSSSEEEECSC
T ss_pred ------------CcEEEEEECCC--CeEEEEEECceeECCc--------EEcccEEEEEEecccccccCCCCceEEecCC
Confidence 48999999997 5699999999999875 5689999999998776555557799999999
Q ss_pred CCCC------hHHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEe
Q 016634 259 GDVS------VPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCL 328 (385)
Q Consensus 259 ~~~S------~~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~ 328 (385)
+.++ +..+|+++|++ +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+||++.+
T Consensus 126 ~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 204 (324)
T 1am5_A 126 PSIAAAGAVPVFDNMGSQSLVEKDLFSFYLSGGGANGSEVMLGGVDNSHYTGSIHWIPVTAE-KYWQVALDGITVNGQTA 204 (324)
T ss_dssp GGGCGGGCCCHHHHHHHTTCSSSSEEEEECCSTTCSCEEEEESSCCGGGBCSCCEEEEEEEE-TTEEEEECEEEETTEEC
T ss_pred ccccccCCCchHHhHHhcCCCCCCEEEEEecCCCCCCcEEEECccCHHHcCCceEEEecCCC-cEEEEEEeEEEECCcee
Confidence 8765 46679999998 89999999875 47999999999876 456666666544 79999999999999886
Q ss_pred ecCCceEEEcCcccccccCHHHHHHHHHHHHHhhcccccccccccccccccc
Q 016634 329 TQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNA 380 (385)
Q Consensus 329 ~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~ 380 (385)
...+..+||||||++++||+++|++|.+++... . ........|++.
T Consensus 205 ~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~-----~-~~g~~~~~C~~~ 250 (324)
T 1am5_A 205 ACEGCQAIVDTGTSKIVAPVSALANIMKDIGAS-----E-NQGEMMGNCASV 250 (324)
T ss_dssp CCCCEEEEECTTCSSEEECTTTHHHHHHHHTCE-----E-CCCCEECCTTSS
T ss_pred eccCceEEEecCCccEECCHHHHHHHHHHhCCc-----c-cCCcEEEeCCCc
Confidence 423488999999999999999999998877543 1 112234578864
No 9
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=100.00 E-value=6.1e-42 Score=333.51 Aligned_cols=227 Identities=22% Similarity=0.328 Sum_probs=187.9
Q ss_pred eeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 016634 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (385)
Q Consensus 99 ~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~ 178 (385)
.+++.|. +..|+++|.||||+|+|.|++||||+++||+|.|..|...........|..++.|||++|+|++..
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~------ 76 (334)
T 1j71_A 4 PTTLINE-GPSYAADIVVGSNQQKQTVVIDTGSSDLWVVDTDAECQVTYSGQTNNFCKQEGTFDPSSSSSAQNL------ 76 (334)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCCTTGGGSSCCBCGGGCTTCEEE------
T ss_pred eEEEecC-CcEEEEEEEEcCCCcEEEEEEcCCCCCEEEecCCCCCcCcccccccccccCCCcCCcccCCCcccC------
Confidence 4566665 778999999999999999999999999999975334432100000012334689999999999985
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 016634 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (385)
Q Consensus 179 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (385)
.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++... ..+||||||+
T Consensus 77 ------------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~-------~~~GilGLg~ 128 (334)
T 1j71_A 77 ------------NQDFSIEYGDL-TSSQGSFYKDTVGFGGI--------SIKNQQFADVTTTS-------VDQGIMGIGF 128 (334)
T ss_dssp ------------EEEEEEEBTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEECSC
T ss_pred ------------CCceEEEECCC-CEEEEEEEEEEEEECCE--------EEccEEEEEEEecC-------CCccEEEEcC
Confidence 49999999996 67899999999999875 56899999998763 4589999999
Q ss_pred CCC--------ChHHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCe
Q 016634 259 GDV--------SVPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNS 326 (385)
Q Consensus 259 ~~~--------S~~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~ 326 (385)
+.. +++.+|+++|++ +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+||++
T Consensus 129 ~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g~ 207 (334)
T 1j71_A 129 TADEAGYNLYDNVPVTLKKQGIINKNAYSLYLNSEDASTGKIIFGGVDNAKYTGTLTALPVTSS-VELRVHLGSINFDGT 207 (334)
T ss_dssp GGGSSTTCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSEEEEEEEEECCCS-SSCEEEEEEEEETTE
T ss_pred CcccCccccCCcHHHHHHHCCCCCccEEEEEeCCCCCCCeEEEEeeechHHccCceEEEEccCC-CeEEEEEeEEEECCE
Confidence 865 678999999999 79999999863 57999999999886 568888888765 799999999999999
Q ss_pred EeecCCceEEEcCcccccccCHHHHHHHHHHHHHhh
Q 016634 327 CLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLV 362 (385)
Q Consensus 327 ~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~ 362 (385)
.+. ....+||||||++++||+++|++|.++|..+.
T Consensus 208 ~~~-~~~~~iiDSGTt~~~lP~~~~~~l~~~~~~~~ 242 (334)
T 1j71_A 208 SVS-TNADVVLDSGTTITYFSQSTADKFARIVGATW 242 (334)
T ss_dssp EEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEE
T ss_pred ecc-CCccEEEeCCCCcEecCHHHHHHHHHHcCCcc
Confidence 886 45689999999999999999999988887654
No 10
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=100.00 E-value=4.4e-42 Score=333.78 Aligned_cols=223 Identities=26% Similarity=0.410 Sum_probs=189.7
Q ss_pred ceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCC
Q 016634 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (385)
Q Consensus 98 ~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~ 176 (385)
..+++.|+.+..|+++|.||||||+|.|++||||+++||+|. |.. ..|. .++.|||++|+|++..
T Consensus 3 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~~C~~---~~C~-------~~~~y~~~~SsT~~~~---- 68 (329)
T 1dpj_A 3 HDVPLTNYLNAQYYTDITLGTPPQNFKVILDTGSSNLWVPSNECGS---LACF-------LHSKYDHEASSSYKAN---- 68 (329)
T ss_dssp EEEECEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTCCS---HHHH-------TSCCBCGGGCTTCEEE----
T ss_pred cceeeeecCCCEEEEEEEECCCCcEEEEEEeCCCcCeEEecCCCCC---cccC-------CcCcCCcccCcCeEEC----
Confidence 357788888899999999999999999999999999999995 544 2221 2478999999999973
Q ss_pred cCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeec
Q 016634 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGL 256 (385)
Q Consensus 177 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGL 256 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+..+.....||||||
T Consensus 69 --------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~f~~~~~~GilGL 124 (329)
T 1dpj_A 69 --------------GTEFAIQYGTG--SLEGYISQDTLSIGDL--------TIPKQDFAEATSEPGLTFAFGKFDGILGL 124 (329)
T ss_dssp --------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCHHHHTTCSCSEEEEC
T ss_pred --------------CcEEEEEECCc--eEEEEEEEEEEEECCe--------EECCeEEEEEEecCccccccCCcceEEEe
Confidence 59999999997 7899999999999875 56899999999877622223467999999
Q ss_pred CCCCCCh------HHHHHHcCCC-CCceEEeecCC-----CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEE
Q 016634 257 GLGDVSV------PSLLAKAGLI-QNSFSICFDEN-----DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (385)
Q Consensus 257 g~~~~S~------~~~l~~~g~i-~~~FS~cl~~~-----~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isV 323 (385)
|++.+++ ..+|+++|++ +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+|
T Consensus 125 g~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v 203 (329)
T 1dpj_A 125 GYDTISVDKVVPPFYNAIQQDLLDEKRFAFYLGDTSKDTENGGEATFGGIDESKFKGDITWLPVRRK-AYWEVKFEGIGL 203 (329)
T ss_dssp SCGGGCGGGCCCHHHHHHHTTCCSSSEEEEEECCGGGTCSSSEEEEESSCCGGGEEEEEEEEECSSB-TTBEEEEEEEEE
T ss_pred CCchhhccCCCCHHHHHHhcCCcCCCEEEEEecCCCCCCCCCcEEEEcCCChhhcCCceEEEEcCCC-ceEEEEeeeEEE
Confidence 9988765 3568999998 79999999764 36999999999876 568888888765 899999999999
Q ss_pred cCeEeecCCceEEEcCcccccccCHHHHHHHHHHHH
Q 016634 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 324 g~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
|++.+......+||||||++++||+++|++|.++|.
T Consensus 204 ~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 239 (329)
T 1dpj_A 204 GDEYAELESHGAAIDTGTSLITLPSGLAEMINAEIG 239 (329)
T ss_dssp TTEEEECSSCEEEECTTCSCEEECHHHHHHHHHHHT
T ss_pred CCeEecCCCccEEeeCCCCcEECCHHHHHHHHHHhC
Confidence 999887667899999999999999999999887764
No 11
>2bju_A Plasmepsin II; aspartic proteinase, drug design, malaria, aspartyl protease, glycoprotein, hydrolase, signal, zymogen; HET: IH4; 1.56A {Plasmodium falciparum} SCOP: b.50.1.2 PDB: 1pfz_A 1xdh_A* 1lf3_A 1w6h_A* 1w6i_A* 1lf4_A* 1lf2_A* 1lee_A* 1m43_A* 2igx_A* 1sme_A* 1me6_A* 1xe6_A* 1xe5_A* 2igy_A* 2r9b_A 3f9q_A 3qrv_A 3qs1_A* 2anl_A* ...
Probab=100.00 E-value=4.2e-42 Score=346.65 Aligned_cols=237 Identities=18% Similarity=0.296 Sum_probs=191.3
Q ss_pred CceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCC
Q 016634 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (385)
Q Consensus 97 ~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~ 176 (385)
...+++.|+.+..|+++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 127 ~~~~~L~n~~~~~Y~~~I~IGTP~Q~~~vi~DTGSs~lWV~~~--~C~~~~C~-------~~~~ydps~SsT~~~~---- 193 (453)
T 2bju_A 127 NDNIELVDFQNIMFYGDAEVGDNQQPFTFILDTGSANLWVPSV--KCTTAGCL-------TKHLYDSSKSRTYEKD---- 193 (453)
T ss_dssp SEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSTTGG-------GSCCBCGGGCTTCEEE----
T ss_pred CCceeeEecCCCEEEEEEEECCCCeEEEEEEECCCcceEEecc--CCCccccC-------CCCcCCCccCCceeEC----
Confidence 3468888888999999999999999999999999999999995 44333332 3578999999999984
Q ss_pred cCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEecc--CCCCCCCCCCeee
Q 016634 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQT--GSYLDGAAPDGVM 254 (385)
Q Consensus 177 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~--g~~~~~~~~dGIl 254 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+ +.|||++.+. +..+.....||||
T Consensus 194 --------------~~~~~i~YgdG--s~~G~~~~Dtv~ig~~--------~v~-~~Fg~a~~~~~~g~~f~~~~~dGIl 248 (453)
T 2bju_A 194 --------------GTKVEMNYVSG--TVSGFFSKDLVTVGNL--------SLP-YKFIEVIDTNGFEPTYTASTFDGIL 248 (453)
T ss_dssp --------------EEEEEEECSSS--EEEEEEEEEEEEETTE--------EEE-EEEEEEEECGGGTTHHHHSSCCEEE
T ss_pred --------------CcEEEEEcCCC--CeEEEEEEEEEEEeCc--------EEE-EEEEEEEEecccCccccccCCceeE
Confidence 49999999997 4899999999999875 456 9999999987 5433334679999
Q ss_pred ecCCCCCC------hHHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEc
Q 016634 255 GLGLGDVS------VPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIG 324 (385)
Q Consensus 255 GLg~~~~S------~~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg 324 (385)
|||++.++ +..+|++||++ +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|.|+ |+||
T Consensus 249 GLg~~~~s~~~~~~~~~~L~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~D~~~y~G~l~~~pv~~~-~~w~V~l~-I~Vg 326 (453)
T 2bju_A 249 GLGWKDLSIGSVDPIVVELKNQNKIENALFTFYLPVHDKHTGFLTIGGIEERFYEGPLTYEKLNHD-LYWQITLD-AHVG 326 (453)
T ss_dssp ECSCGGGSTTCCCCHHHHHHHTTSSSSCEEEEECCBTTTBCEEEEESSCCGGGEEEEEEEEEEEEE-TTEEEEEE-EEET
T ss_pred eccCCcccccCCCcHHHHHHHCCCCCCCEEEEEeCCCCCCCeEEEECCCCHHHcCCceEEEecCCC-ceEEEEEE-EEEC
Confidence 99998755 45679999999 79999999875 57999999999876 567777777654 79999999 9999
Q ss_pred CeEeecCCceEEEcCcccccccCHHHHHHHHHHHHHhhccccccccccccccccc
Q 016634 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYN 379 (385)
Q Consensus 325 ~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~ 379 (385)
++ +. ....+||||||++++||+++|++|.+++ ++............|++
T Consensus 327 g~-~~-~~~~aIiDSGTsl~~lP~~~~~~l~~~i----~~~~~~~g~~~~v~C~~ 375 (453)
T 2bju_A 327 NI-ML-EKANCIVDSGTSAITVPTDFLNKMLQNL----DVIKVPFLPFYVTLCNN 375 (453)
T ss_dssp TE-EE-EEEEEEECTTCCSEEECHHHHHHHTTTS----SCEECTTSSCEEEETTC
T ss_pred cE-Ee-ccccEEEcCCCCeEecCHHHHHHHHHHh----CCcccCCCceEEEecCC
Confidence 94 33 5678999999999999999998886655 33321111124557886
No 12
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=100.00 E-value=6e-42 Score=332.06 Aligned_cols=224 Identities=25% Similarity=0.403 Sum_probs=189.1
Q ss_pred ceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 016634 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (385)
Q Consensus 98 ~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~ 177 (385)
..+++.|+.+.+|+++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 4 ~~~~l~n~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~----- 69 (323)
T 3cms_A 4 ASVPLTNYLDSQYFGKIYLGTPPQEFTVLFDTGSSDFWVPSI--YCKSNACK-------NHQRFDPRKSSTFQNL----- 69 (323)
T ss_dssp EEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEE-----
T ss_pred ceeeeEeccCCEEEEEEEECCCCeEEEEEEeCCccceEEcCC--CCCccccc-------CCCCCCCccCCCeEEC-----
Confidence 347788888999999999999999999999999999999995 44322222 3578999999999985
Q ss_pred CCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecC
Q 016634 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (385)
Q Consensus 178 ~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg 257 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+..+.....+||||||
T Consensus 70 -------------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg 126 (323)
T 3cms_A 70 -------------GKPLSIHYGTG--SMQGILGYDTVTVSNI--------VDIQQTVGLSTQEPGDFFTYAEFDGILGMA 126 (323)
T ss_dssp -------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHHSSCSEEEECS
T ss_pred -------------CcEEEEEeCCC--CeEEEEEEEEEEECCe--------EEeccEEEEEEecccccccccCCceEEecC
Confidence 48999999997 5899999999999875 568999999998766333223569999999
Q ss_pred CCCCC------hHHHHHHcCCC-CCceEEeecCC-CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEe
Q 016634 258 LGDVS------VPSLLAKAGLI-QNSFSICFDEN-DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCL 328 (385)
Q Consensus 258 ~~~~S------~~~~l~~~g~i-~~~FS~cl~~~-~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~ 328 (385)
++.++ +..+|+++|++ +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+||++.+
T Consensus 127 ~~~~s~~~~~~~~~~l~~q~~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 205 (323)
T 3cms_A 127 YPSLASEYSIPVFDNMMNRHLVAQDLFSVYMDRNGQESMLTLGAIDPSYYTGSLHWVPVTVQ-QYWQFTVDSVTISGVVV 205 (323)
T ss_dssp CGGGSCTTCCCHHHHHHHTTCSSSSEEEEECCTTSSCEEEEESCCCGGGEEEEEEEEECSSB-TTBEEEEEEEEETTEEE
T ss_pred cchhhccCCCCHHHHHHHCCCCCCCEEEEEECCCCCCEEEEECCCChhhccCceEEEECccC-CeEEEEEeeEEECCEEe
Confidence 98764 46679999998 89999999875 45999999999876 568888888765 89999999999999987
Q ss_pred e-cCCceEEEcCcccccccCHHHHHHHHHHHH
Q 016634 329 T-QSGFQALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 329 ~-~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
. .....+||||||++++||+++|++|.+++.
T Consensus 206 ~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~ 237 (323)
T 3cms_A 206 ACEGGCQAILDTGTSKLVGPSSDILNIQQAIG 237 (323)
T ss_dssp ESTTCEEEEECTTCCSEEECHHHHHHHHHHHT
T ss_pred ecCCCcEEEEecCCccEeCCHHHHHHHHHHhC
Confidence 5 356789999999999999999988887764
No 13
>1htr_B Gastricsin; aspartyl protease; 1.62A {Homo sapiens} SCOP: b.50.1.2 PDB: 1avf_A
Probab=100.00 E-value=6.1e-42 Score=332.76 Aligned_cols=237 Identities=24% Similarity=0.412 Sum_probs=193.6
Q ss_pred eEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCC
Q 016634 100 HFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (385)
Q Consensus 100 ~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C 179 (385)
+++. +.+..|+++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 5 ~~l~-~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------- 67 (329)
T 1htr_B 5 EPMA-YMDAAYFGEISIGTPPQNFLVLFDTGSSNLWVPSV--YCQSQACT-------SHSRFNPSESSTYSTN------- 67 (329)
T ss_dssp CGGG-GTTCCEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEE-------
T ss_pred eeeE-EcCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCCcccC-------CCCcCCCccCCCeEEC-------
Confidence 5565 67789999999999999999999999999999995 34322221 2478999999999985
Q ss_pred CCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCC
Q 016634 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (385)
Q Consensus 180 ~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~ 259 (385)
.|.|.+.|++| +..|.+++|+|+|++. ..+++.|||++.+.+..+.....+||||||++
T Consensus 68 -----------~~~~~i~Yg~g--s~~G~~~~D~v~~g~~--------~~~~~~fg~~~~~~~~~~~~~~~~GilGLg~~ 126 (329)
T 1htr_B 68 -----------GQTFSLQYGSG--SLTGFFGYDTLTVQSI--------QVPNQEFGLSENEPGTNFVYAQFDGIMGLAYP 126 (329)
T ss_dssp -----------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEESSCSSGGGGGCSCCEEEECCCC
T ss_pred -----------CcEEEEEeCCC--CeEEEEEeeeEEEcce--------EECceEEEEEEEccccccccCCCceEEecCCC
Confidence 48999999997 5699999999999875 56899999999887654444467999999998
Q ss_pred CCC------hHHHHHHcCCC-CCceEEeecCCC---cceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEe
Q 016634 260 DVS------VPSLLAKAGLI-QNSFSICFDEND---SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCL 328 (385)
Q Consensus 260 ~~S------~~~~l~~~g~i-~~~FS~cl~~~~---~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~ 328 (385)
.++ +..+|+++|++ +++||+||.++. .|.|+||++|+.+ .+.+.|+|+... .+|.|+|++|+||++.+
T Consensus 127 ~~s~~~~~~~~~~l~~qg~i~~~~Fs~~L~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~ 205 (329)
T 1htr_B 127 ALSVDEATTAMQGMVQEGALTSPVFSVYLSNQQGSSGGAVVFGGVDSSLYTGQIYWAPVTQE-LYWQIGIEEFLIGGQAS 205 (329)
T ss_dssp SCCCTTCCSHHHHHHHTTCSSSSEEEEEECSSCSSEEEEEEESSCCGGGEEEEEEEEEBCSS-SSCEEEECEEEETTEEC
T ss_pred cccccCCCCHHHHHHhcCCCCCCEEEEEEcCCCCCCCcEEEEcccCHHHcCCceEEEECCCC-ceEEEEEeEEEECCcee
Confidence 765 46679999998 899999998764 7999999999876 568888888765 89999999999999886
Q ss_pred e--cCCceEEEcCcccccccCHHHHHHHHHHHHHhhcccccccccccccccccc
Q 016634 329 T--QSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNA 380 (385)
Q Consensus 329 ~--~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~ 380 (385)
. .....+||||||++++||+++|++|.+++.... ... ......|++.
T Consensus 206 ~~~~~~~~aiiDSGTt~~~lp~~~~~~l~~~~~~~~----~~~-g~~~~~C~~~ 254 (329)
T 1htr_B 206 GWCSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQE----DEY-GQFLVNCNSI 254 (329)
T ss_dssp CTTTTCEEEEECTTCCSEEEEGGGHHHHHHHHTCEE----CTT-SCEEECGGGG
T ss_pred eecCCCceEEEecCCccEECCHHHHHHHHHHhCCee----cCC-CeEEEeCCCc
Confidence 4 356789999999999999999999987764432 111 1233468864
No 14
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=100.00 E-value=9e-42 Score=335.66 Aligned_cols=239 Identities=24% Similarity=0.285 Sum_probs=194.1
Q ss_pred ceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CC---CCCCCCcccccccCCCCCCCCCCCCCCCcccc
Q 016634 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CI---QCAPLSASYYTSLDRNLSEYDPSSSSSSKNVS 173 (385)
Q Consensus 98 ~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~---~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~ 173 (385)
..+++.|+.+..|+++|.||||+|+|.|+|||||+++||+|. |. .|. .++.|+|++|+|++..
T Consensus 8 ~~~~l~~~~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~~~C~------------~~~~y~~~~SsT~~~~- 74 (361)
T 1mpp_A 8 DTPGLYDFDLEEYAIPVSIGTPGQDFYLLFDTGSSDTWVPHKGCDNSEGCV------------GKRFFDPSSSSTFKET- 74 (361)
T ss_dssp EEEEEEETTTTEEEEEEEETTTTEEEEEEEETTCCCCEEEBTTCCGGGTCC------------SSCCBCGGGCTTCEEE-
T ss_pred ceEEeecCCCCEEEEEEEECCCCcEEEEEEcCCCCCeEECCCCCCCCccCC------------CCCcCCCccCCceEec-
Confidence 357888888999999999999999999999999999999996 65 443 2478999999999985
Q ss_pred CCCcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccC-----CCCCCC
Q 016634 174 CSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTG-----SYLDGA 248 (385)
Q Consensus 174 C~~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g-----~~~~~~ 248 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+ .++...
T Consensus 75 -----------------~~~~~i~Yg~G--s~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~~~ 127 (361)
T 1mpp_A 75 -----------------DYNLNITYGTG--GANGIYFRDSITVGGA--------TVKQQTLAYVDNVSGPTAEQSPDSEL 127 (361)
T ss_dssp -----------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEESGGGSSCTTCSS
T ss_pred -----------------CCeEEEEECCc--eEEEEEEEEEEEECCE--------EEeceEEEEEEeccCccccccccccC
Confidence 48999999997 4899999999999875 568999999999876 444445
Q ss_pred CCCeeeecCCCCCCh------------HHHHHHcCCC-CCceEEeecCC-CcceEEEcccCCCC-ceeeeeeecCCCCc-
Q 016634 249 APDGVMGLGLGDVSV------------PSLLAKAGLI-QNSFSICFDEN-DSGSVFFGDQGPAT-QQSTSFLPIGEKYD- 312 (385)
Q Consensus 249 ~~dGIlGLg~~~~S~------------~~~l~~~g~i-~~~FS~cl~~~-~~G~l~fG~~d~~~-~~~tp~v~~~~~~~- 312 (385)
..+||||||++.++. +.+|+++|++ +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+....+
T Consensus 128 ~~~GilGLg~~~~s~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~ 207 (361)
T 1mpp_A 128 FLDGIFGAAYPDNTAMEAEYGDTYNTVHVNLYKQGLISSPVFSVYMNTNDGGGQVVFGGVNNTLLGGDIQYTDVLKSRGG 207 (361)
T ss_dssp CCCEEEECSCGGGSHHHHHHSCCCCCHHHHHHHTTSSSSSEEEEECCCSSSEEEEEESSCCGGGBSSCCEEEECEEETTE
T ss_pred CCCCEEEeCCcccccccccccccCCCHHHHHHHcCCCCCcEEEEEecCCCCCcEEEEecCChhhcCCceEEEEcccCCCc
Confidence 679999999986654 4479999998 79999999985 57999999999876 34555555543322
Q ss_pred --cEEEeEeEEEEcCeEee-cCCceEE-EcCcccccccCHHHHHHHHHHHHHhhcccccccccccccccccc
Q 016634 313 --AYFVGVESYCIGNSCLT-QSGFQAL-VDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYNA 380 (385)
Q Consensus 313 --~y~v~l~~isVg~~~~~-~~~~~~i-iDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~~ 380 (385)
+|.|.|++|+|+++.+. .....+| |||||++++||+++|++|.++|..... .........|++.
T Consensus 208 ~~~~~v~l~~i~v~~~~~~~~~~~~ai~iDSGTt~~~lP~~~~~~l~~~~~~~~~----~~~g~~~~~C~~~ 275 (361)
T 1mpp_A 208 YFFWDAPVTGVKIDGSDAVSFDGAQAFTIDTGTNFFIAPSSFAEKVVKAALPDAT----ESQQGYTVPCSKY 275 (361)
T ss_dssp EEEEEEEEEEEEETTEEEEEEEEEEEEEEETTCCSEEEEHHHHHHHHHHHCTTCE----EETTEEEEEHHHH
T ss_pred eeEEEEEEeEEEECCeeeccCCCCEEEEECCCCCceeCCHHHHHHHHHHhCCccc----CCCCcEEEECCCc
Confidence 89999999999998873 3457899 999999999999999999888755421 1112234578863
No 15
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=100.00 E-value=9.5e-42 Score=333.12 Aligned_cols=229 Identities=21% Similarity=0.370 Sum_probs=187.5
Q ss_pred ceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 016634 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (385)
Q Consensus 98 ~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~ 177 (385)
..+++.| .+..|+++|.||||+|+|.|++||||+++||+|.|..|....+......|..++.|+|++|+|++..
T Consensus 3 v~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~~~~C~~~~~y~~~~SsT~~~~----- 76 (342)
T 2qzx_A 3 VAVTLHN-EAITYTADITVGSDNQKLNVIVDTGSSDLWIPDSNVICIPKWRGDKGDFCKSAGSYSPASSRTSQNL----- 76 (342)
T ss_dssp EEEEEEE-CSSCEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSSSCCTTGGGTTCCBCGGGCTTCEEE-----
T ss_pred eeEEEec-CCeEEEEEEEECCCCcEEEEEEeCCCCCeEEecCCCCccCccccCccccccCCCcCCcccCCCcccC-----
Confidence 3456665 4678999999999999999999999999999975323432100000012334689999999999985
Q ss_pred CCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecC
Q 016634 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLG 257 (385)
Q Consensus 178 ~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg 257 (385)
.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++... ..+||||||
T Consensus 77 -------------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~-------~~~GilGLg 127 (342)
T 2qzx_A 77 -------------NTRFDIKYGDG-SYAKGKLYKDTVGIGGV--------SVRDQLFANVWSTS-------ARKGILGIG 127 (342)
T ss_dssp -------------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEEC-------SSSCEEECS
T ss_pred -------------CCcEEEEeCCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEecC-------CCcCEEEEc
Confidence 49999999996 67899999999999875 56899999998763 458999999
Q ss_pred CCCC--------ChHHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcC
Q 016634 258 LGDV--------SVPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGN 325 (385)
Q Consensus 258 ~~~~--------S~~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~ 325 (385)
++.. +++.+|+++|+| +++||+||++. ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+||+
T Consensus 128 ~~~~~~~~~~~~~~~~~L~~qg~i~~~~Fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~g 206 (342)
T 2qzx_A 128 FQSGEATEFDYDNLPISLRNQGIIGKAAYSLYLNSAEASTGQIIFGGIDKAKYSGSLVDLPITSE-KKLTVGLRSVNVRG 206 (342)
T ss_dssp CGGGCSSSSCCCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEETT
T ss_pred cccccCCCccCccHHHHHHHCCCcCccEEEEEeCCCCCCCeEEEECccchhhEecceEEEeccCC-ceEEEEEeEEEECC
Confidence 9765 678999999999 79999999863 57999999999876 567778887765 69999999999999
Q ss_pred eEeecCCceEEEcCcccccccCHHHHHHHHHHHHHhhc
Q 016634 326 SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVS 363 (385)
Q Consensus 326 ~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~ 363 (385)
+.+. ....+||||||++++||+++|++|.++|.....
T Consensus 207 ~~~~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~~~~ 243 (342)
T 2qzx_A 207 RNVD-ANTNVLLDSGTTISYFTRSIVRNILYAIGAQMK 243 (342)
T ss_dssp EEEE-EEEEEEECTTCSSEEECHHHHHHHHHHHTCEEE
T ss_pred EecC-CCcCEEEeCCCCCEEcCHHHHHHHHHHhCCeee
Confidence 9886 456899999999999999999999888876553
No 16
>3k1w_A Renin; protease, alternative splicing, aspartyl protease, cleavage on PAIR of basic residues, disease mutation, disulfide bond, glycoprotein; HET: BFX NDG HSQ; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 3d91_A* 3g70_A* 3g6z_A* 3own_A* 2iko_A* 1bbs_A* 1rne_A* 2bkt_A* 2bks_A* 2iku_A* 2il2_A* 2ren_A* 2v0z_C* 2v10_C* 2v11_C* 2v12_C* 2v13_A* 2v16_C* 3g72_A* 3oot_A* ...
Probab=100.00 E-value=7.1e-42 Score=333.56 Aligned_cols=227 Identities=24% Similarity=0.405 Sum_probs=192.2
Q ss_pred CCceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccC
Q 016634 96 GSQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (385)
Q Consensus 96 g~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C 174 (385)
+...+++.|+.+.+||++|.||||||+|.|++||||+++||+|. |..| ...| ..++.|+|++|+|++..
T Consensus 6 ~~~~~~l~n~~d~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~C~~~-~~~C-------~~~~~y~~~~SsT~~~~-- 75 (341)
T 3k1w_A 6 TTSSVILTNYMDTQYYGEIGIGTPPQTFKVVFDTGSSNVWVPSSKCSRL-YTAC-------VYHKLFDASDSSSYKHN-- 75 (341)
T ss_dssp BCEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBTTSCTT-CHHH-------HTSCCBCGGGCTTCEEE--
T ss_pred CCccccceEccCCEEEEEEEEcCCCcEEEEEEeCCCcceEEccCCCCCC-CCcc-------cCCCCCCCCcCcCeeEC--
Confidence 34578899999999999999999999999999999999999995 5421 1122 13578999999999983
Q ss_pred CCcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeee
Q 016634 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVM 254 (385)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIl 254 (385)
.|.|.+.|++| ++.|.+++|+|+|++. .. ++.|||++...+..+.....+|||
T Consensus 76 ----------------~~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v-~~~fg~~~~~~~~~~~~~~~~Gil 128 (341)
T 3k1w_A 76 ----------------GTELTLRYSTG--TVSGFLSQDIITVGGI--------TV-TQMFGEVTEMPALPFMLAEFDGVV 128 (341)
T ss_dssp ----------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EE-EEEEEEEEECCHHHHTTCSSSEEE
T ss_pred ----------------CCEEEEEECCc--EEEEEEEEEEEEECCc--------ee-eEEEEEEEEccccccccCCcceEE
Confidence 49999999997 5899999999999875 45 999999998876523334679999
Q ss_pred ecCCCCCC------hHHHHHHcCCC-CCceEEeecCCC------cceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeE
Q 016634 255 GLGLGDVS------VPSLLAKAGLI-QNSFSICFDEND------SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVES 320 (385)
Q Consensus 255 GLg~~~~S------~~~~l~~~g~i-~~~FS~cl~~~~------~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~ 320 (385)
|||++..+ ++.+|++||+| +++||+||.++. .|.|+||++|+.+ .+.+.|+|+... .+|.|.|++
T Consensus 129 GLg~~~~s~~~~~~~~~~l~~qg~i~~~~Fs~~l~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~ 207 (341)
T 3k1w_A 129 GMGFIEQAIGRVTPIFDNIISQGVLKEDVFSFYYNRDSENSQSLGGQIVLGGSDPQHYEGNFHYINLIKT-GVWQIQMKG 207 (341)
T ss_dssp ECSCGGGCGGGCCCHHHHHHHHTCBSSSEEEEEECCCC-----CCEEEEESSCCGGGEEEEEEEEECSST-TSCEEEECC
T ss_pred ECCchhhcccCCCCHHHHHHHCCCCCCCEEEEEEeCCCCcCCCCCCEEEECccChHHccCceEEEecCCC-CEEEEEEeE
Confidence 99998765 56789999999 799999998764 7999999999987 578888888765 899999999
Q ss_pred EEEcCeEee-cCCceEEEcCcccccccCHHHHHHHHHHHHH
Q 016634 321 YCIGNSCLT-QSGFQALVDSGASFTFLPTEIYAEVVVKFDK 360 (385)
Q Consensus 321 isVg~~~~~-~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~ 360 (385)
|+||++.+. .....+||||||++++||+++|++|.+++..
T Consensus 208 i~v~~~~~~~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~~ 248 (341)
T 3k1w_A 208 VSVGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGA 248 (341)
T ss_dssp EEETTEEEECTTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred EEECCEEeecCCCCEEEEECCCChhcCCHHHHHHHHHHcCC
Confidence 999999653 4567899999999999999999999887743
No 17
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=100.00 E-value=2.9e-42 Score=335.20 Aligned_cols=218 Identities=21% Similarity=0.337 Sum_probs=183.1
Q ss_pred cccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCC
Q 016634 104 NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSR 182 (385)
Q Consensus 104 ~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~ 182 (385)
...+..|+++|.||||+|+|.|++||||+++||+|. |..|..+ .++.|||++|+|++.++
T Consensus 11 ~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~~----------~~~~y~~~~SsT~~~~~--------- 71 (329)
T 3c9x_A 11 DSADSEYITSVSIGTPAQVLPLDFDTGSSDLWVFSSETPKSSAT----------GHAIYTPSKSSTSKKVS--------- 71 (329)
T ss_dssp STTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCHHHHT----------TSCCBCGGGCTTCEECT---------
T ss_pred CCCCCEEEEEEEECCCCeEEEEEEcCCCCCeEEecCCCCccccC----------CCCcCCcccCcCceEcC---------
Confidence 345678999999999999999999999999999997 7666321 35789999999999863
Q ss_pred CCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC
Q 016634 183 SSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS 262 (385)
Q Consensus 183 ~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S 262 (385)
.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++.+.+.+......|||||||++.++
T Consensus 72 --------~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s 134 (329)
T 3c9x_A 72 --------GASWSISYGDG-SSSSGDVYTDKVTIGGF--------SVNTQGVESATRVSTEFVQDTVISGLVGLAFDSGN 134 (329)
T ss_dssp --------TCBEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGC
T ss_pred --------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEcceEEEEEEecCccccccCCCceeEEeCccccc
Confidence 48999999996 66899999999999875 56899999999887655433467999999997655
Q ss_pred ---------hHHHHHHcCCCCCceEEeecCCCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEeecCC
Q 016634 263 ---------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSG 332 (385)
Q Consensus 263 ---------~~~~l~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~ 332 (385)
+..+|+++ +.+++||+||.++..|.|+||++|+.+ .+.+.|+|+.....+|.|+|++|+||++.+....
T Consensus 135 ~~~~~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~ 213 (329)
T 3c9x_A 135 QVRPHPQKTWFSNAASS-LAEPLFTADLRHGQNGSYNFGYIDTSVAKGPVAYTPVDNSQGFWEFTASGYSVGGGKLNRNS 213 (329)
T ss_dssp CCBSSCCCCHHHHHHTT-SSSSEEEEECCSSSCEEEEESSCCGGGCSSCEEEEECBCTTSSCEEEECCEEETTCCCCSCC
T ss_pred ccCCCCCCCHHHHHHHh-cCCCEEEEEecCCCCcEEEEeCcChhhcccceEEEEccCCCceEEEEEeeEEECCEeccCCC
Confidence 35567765 448999999998778999999999876 4677777775434799999999999999886667
Q ss_pred ceEEEcCcccccccCHHHHHHHHHHH
Q 016634 333 FQALVDSGASFTFLPTEIYAEVVVKF 358 (385)
Q Consensus 333 ~~~iiDSGTs~t~Lp~~~y~~l~~~~ 358 (385)
+.+||||||++++||+++|++|.++|
T Consensus 214 ~~aiiDSGTt~~~lp~~~~~~i~~~i 239 (329)
T 3c9x_A 214 IDGIADTGTTLLLLDDNVVDAYYANV 239 (329)
T ss_dssp EEEEECTTCCSEEECHHHHHHHHTTC
T ss_pred ceEEEECCCCcEeCCHHHHHHHHHhC
Confidence 89999999999999999998877655
No 18
>4aa9_A Chymosin; hydrolase, aspartic peptidase, rennet; HET: NAG; 1.60A {Camelus dromedarius} PDB: 4aa8_A 1czi_E* 1cms_A 4cms_A 3cms_A
Probab=100.00 E-value=7.6e-42 Score=330.64 Aligned_cols=223 Identities=26% Similarity=0.422 Sum_probs=186.2
Q ss_pred eeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 016634 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (385)
Q Consensus 99 ~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~ 178 (385)
.+++.|+.+..||++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 2 ~~~l~n~~d~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~------ 66 (320)
T 4aa9_A 2 REPLTSYLDSQYFGKIYIGTPPQEFTVVFDTGSSDLWVPSI--YCKSNVCK-------NHHRFDPRKSSTFRNL------ 66 (320)
T ss_dssp ------CCCCCCEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCSHHHH-------TSCCBCGGGCTTCEEE------
T ss_pred CccceeccCCEEEEEEEECCCCeEEEEEEeCCCCceEEcCC--CCCccccC-------CCCCCCCCCCcCeEcC------
Confidence 35788899999999999999999999999999999999995 44332332 3578999999999985
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 016634 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (385)
Q Consensus 179 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++...+..+.....+||||||+
T Consensus 67 ------------~~~~~i~Yg~g--s~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~ 124 (320)
T 4aa9_A 67 ------------GKPLSIHYGTG--SMEGFLGYDTVTVSNI--------VDPNQTVGLSTEQPGEVFTYSEFDGILGLAY 124 (320)
T ss_dssp ------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCSHHHHSCCCSEEEECSC
T ss_pred ------------CcEEEEEECCc--EEEEEEEEEEEEECCE--------eecCeEEEEEEEcccccccccCcccEEecCc
Confidence 48999999997 5899999999999985 5689999999988764333446799999999
Q ss_pred CCCC------hHHHHHHcCCC-CCceEEeecCC-CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEee
Q 016634 259 GDVS------VPSLLAKAGLI-QNSFSICFDEN-DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLT 329 (385)
Q Consensus 259 ~~~S------~~~~l~~~g~i-~~~FS~cl~~~-~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~~ 329 (385)
+.++ +..+|+++|+| +++||+||.++ ..|.|+||++|+.+ .+++.|+|+... .+|.|.|++|+||++.+.
T Consensus 125 ~~~s~~~~~~~~~~l~~~g~i~~~~Fs~~l~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~~~~ 203 (320)
T 4aa9_A 125 PSLASEYSVPVFDNMMDRHLVARDLFSVYMDRNGQGSMLTLGAIDPSYYTGSLHWVPVTLQ-QYWQFTVDSVTINGVAVA 203 (320)
T ss_dssp GGGSCTTCCCHHHHHHHTTCSSSSEEEEECCSSSSCCEEEETCCCGGGEEEEEEEEECSSB-TTBEEEECEEEETTEEEE
T ss_pred ccccccCCCCHHHHHHhCCCCCCceEEEEeCCCCCCeEEEEcccCHHHccCceEEEEcccC-CceEEEEeEEEECCEEec
Confidence 7654 56779999999 89999999985 68999999999987 578888888765 899999999999999875
Q ss_pred c-CCceEEEcCcccccccCHHHHHHHHHHHH
Q 016634 330 Q-SGFQALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 330 ~-~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
. ....+||||||++++||+++|++|.+++.
T Consensus 204 ~~~~~~~iiDsGtt~~~lP~~~~~~i~~~~~ 234 (320)
T 4aa9_A 204 CVGGCQAILDTGTSVLFGPSSDILKIQMAIG 234 (320)
T ss_dssp STTCEEEEECTTCSSEEEEHHHHHHHHHHTT
T ss_pred cCCCcEEEEECCCCcEECCHHHHHHHHHHhC
Confidence 3 46789999999999999999988877763
No 19
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=100.00 E-value=6.1e-42 Score=332.92 Aligned_cols=216 Identities=19% Similarity=0.341 Sum_probs=181.9
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC
Q 016634 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (385)
Q Consensus 105 ~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~~ 183 (385)
..+..|+++|.||||+|+|.|++||||+++||+|. |..|.. .++.|||++|+|++.++
T Consensus 12 ~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~C~~~~~-----------~~~~y~~~~SsT~~~~~---------- 70 (329)
T 1oew_A 12 SLDDAYITPVQIGTPAQTLNLDFDTGSSDLWVFSSETTASEV-----------XQTIYTPSKSTTAKLLS---------- 70 (329)
T ss_dssp TTCCCEEEEEEETTTTEEEEEEEETTCCCEEECBTTSCGGGC------------CCCBCGGGCTTCEEEE----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEECCCCCCeEEecCCCCcccc-----------ccCccCCccCccceecC----------
Confidence 35678999999999999999999999999999997 776642 24789999999999863
Q ss_pred CCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC-
Q 016634 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS- 262 (385)
Q Consensus 184 ~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S- 262 (385)
.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++.+.+.+......|||||||++.++
T Consensus 71 -------~~~~~i~Yg~G-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~ 134 (329)
T 1oew_A 71 -------GATWSISYGDG-SSSSGDVYTDTVSVGGL--------TVTGQAVESAKKVSSSFTEDSTIDGLLGLAFSTLNT 134 (329)
T ss_dssp -------EEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCC
T ss_pred -------CCeEEEEeCCC-CcEEEEEEEEEEEECCE--------EEeeeEEEEEEecCccccccCCCceEEEeccccccc
Confidence 48999999996 66899999999999875 56899999999887655433467999999998655
Q ss_pred --------hHHHHHHcCCCCCceEEeecCCCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEeecCCc
Q 016634 263 --------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGF 333 (385)
Q Consensus 263 --------~~~~l~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~ 333 (385)
+..+|+++ +-+++||+||.++..|.|+||++|+.+ .+.+.|+|+.....+|.|.|++|+||++.+....+
T Consensus 135 ~~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~v~l~~i~v~~~~~~~~~~ 213 (329)
T 1oew_A 135 VSPTQQKTFFDNAKAS-LDSPVFTADLGYHAPGTYNFGFIDTTAYTGSITYTAVSTKQGFWEWTSTGYAVGSGTFKSTSI 213 (329)
T ss_dssp CBSSCCCCHHHHHTTT-SSSSEEEEECCSSSCEEEEESCCCTTSSSSCCEEEECBCTTSSCEEEEEEEEETTSCCEEEEE
T ss_pred cCcCCCCCHHHHHHHh-ccCcEEEEEccCCCCeEEEEeccChHhcccceEEEEccCCCceEEEEEeeEEECCeeccCCCc
Confidence 34667765 338999999998778999999999876 56777777754348999999999999988765667
Q ss_pred eEEEcCcccccccCHHHHHHHHHHH
Q 016634 334 QALVDSGASFTFLPTEIYAEVVVKF 358 (385)
Q Consensus 334 ~~iiDSGTs~t~Lp~~~y~~l~~~~ 358 (385)
.+||||||++++||+++|++|.++|
T Consensus 214 ~aiiDSGTt~~~lP~~~~~~l~~~i 238 (329)
T 1oew_A 214 DGIADTGTTLLYLPATVVSAYWAQV 238 (329)
T ss_dssp EEEECTTCCSEEECHHHHHHHHTTS
T ss_pred eEEEeCCCCCEECCHHHHHHHHHhC
Confidence 8999999999999999998887655
No 20
>1qdm_A Prophytepsin; aspartic proteinases, saposin-like domain, zymogen structure, hydrolase; 2.30A {Hordeum vulgare} SCOP: a.64.1.2 b.50.1.2
Probab=100.00 E-value=4.4e-41 Score=342.01 Aligned_cols=226 Identities=27% Similarity=0.442 Sum_probs=188.9
Q ss_pred CceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCC-CCCcccccccCCCCCCCCCCCCCCCccccCC
Q 016634 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCA-PLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (385)
Q Consensus 97 ~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~-~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~ 175 (385)
...+++.|+.+.+||++|.||||||+|.|+|||||+++||+|. .|. ...|. .++.|||++|+||+.
T Consensus 41 ~~~~~l~n~~~~~Y~~~i~IGTP~Q~~~v~~DTGSs~lWV~~~--~C~~~~~C~-------~~~~y~~~~SsT~~~---- 107 (478)
T 1qdm_A 41 GDIVALKNYMNAQYFGEIGVGTPPQKFTVIFDTGSSNLWVPSA--KCYFSIACY-------LHSRYKAGASSTYKK---- 107 (478)
T ss_dssp SCSGGGCCGGGCCEEEEEEETTTTEEEEEEEETTCCCCEEEBT--TCCSCGGGG-------GSCCBCGGGCTTCBC----
T ss_pred CceEEeEeccCCEEEEEEEECCCCeEEEEEEcCCCcceEEecC--CCCCCcccc-------CCCCCCcccCCCeee----
Confidence 3457888888899999999999999999999999999999995 343 11222 357899999999997
Q ss_pred CcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeee
Q 016634 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (385)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (385)
..|.|.+.|++| ++.|.+++|+|+|++. ..+++.|||++.+.+..+.....|||||
T Consensus 108 --------------~~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~~~Fg~a~~~~~~~f~~~~~dGIlG 163 (478)
T 1qdm_A 108 --------------NGKPAAIQYGTG--SIAGYFSEDSVTVGDL--------VVKDQEFIEATKEPGITFLVAKFDGILG 163 (478)
T ss_dssp --------------CCCEEEEEETTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEECCBSHHHHCSSSEEEE
T ss_pred --------------CCcEEEEEcCCC--CeEEEEEEEEEEECCe--------EECCEEEEEEEecCCcccccccccceec
Confidence 358999999997 5899999999999875 5689999999987664322346799999
Q ss_pred cCCCCCCh------HHHHHHcCCC-CCceEEeecCC----CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEE
Q 016634 256 LGLGDVSV------PSLLAKAGLI-QNSFSICFDEN----DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (385)
Q Consensus 256 Lg~~~~S~------~~~l~~~g~i-~~~FS~cl~~~----~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isV 323 (385)
||++.+++ ..+|++||++ +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... ++|.|.|++|+|
T Consensus 164 Lg~~~~s~~~~~p~~~~l~~qg~i~~~~FS~~L~~~~~~~~~G~l~fGg~d~~~~~G~l~~~pv~~~-~~w~v~l~~i~v 242 (478)
T 1qdm_A 164 LGFKEISVGKAVPVWYKMIEQGLVSDPVFSFWLNRHVDEGEGGEIIFGGMDPKHYVGEHTYVPVTQK-GYWQFDMGDVLV 242 (478)
T ss_dssp CSCGGGCGGGCCCHHHHHTTTTCCSSSEEEEECCCC-----CEEEEETCCCTTSEEEEEEEEEEEEE-TTEEEEECCEEE
T ss_pred ccccccccCCCCcHHHHHHHCCCCCCCEEEEEeecCCCCCCCeEEEeCCcCHhhcCCCceEEeccCC-CeEEEEEeEEEE
Confidence 99998775 3458999998 79999999875 47999999999987 567888887654 899999999999
Q ss_pred cCeEee--cCCceEEEcCcccccccCHHHHHHHHHHHHH
Q 016634 324 GNSCLT--QSGFQALVDSGASFTFLPTEIYAEVVVKFDK 360 (385)
Q Consensus 324 g~~~~~--~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~ 360 (385)
|++.+. .....+||||||++++||+++|++|.++|..
T Consensus 243 ~g~~~~~~~~~~~aiiDTGTs~~~lP~~~~~~i~~~i~a 281 (478)
T 1qdm_A 243 GGKSTGFCAGGCAAIADSGTSLLAGPTAIITEINEKIGA 281 (478)
T ss_dssp TTEECSTTTTCEEEEECSSCCSEEECHHHHHHHHHHHTC
T ss_pred CCEEEeecCCCceEEEcCCCCceeCCHHHHHHHHHHhCc
Confidence 999864 3567899999999999999999999888753
No 21
>1miq_A Plasmepsin; aspartic proteinase zymogen, domain opening, hydrolase; 2.50A {Plasmodium vivax} SCOP: b.50.1.2 PDB: 1ls5_A*
Probab=100.00 E-value=5.4e-41 Score=331.89 Aligned_cols=234 Identities=18% Similarity=0.316 Sum_probs=192.1
Q ss_pred ceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCc
Q 016634 98 QTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHP 177 (385)
Q Consensus 98 ~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~ 177 (385)
..+++.|+.+..|+++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 52 ~~~pl~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-------~~~~y~~~~SsT~~~~----- 117 (375)
T 1miq_A 52 DVIELDDVANIMFYGEGEVGDNHQKFMLIFDTGSANLWVPSK--KCNSSGCS-------IKNLYDSSKSKSYEKD----- 117 (375)
T ss_dssp BCCCGGGTBCEEEECCCEETTTTEECCEEEETTCCCEEEEBT--TCCSSGGG-------GSCCBCGGGCTTCEEE-----
T ss_pred ceEEcccCCCCEEEEEEEECCCCeEEEEEEeCCCcceEEccC--CCCccccc-------CCCcCCCccCCceEEC-----
Confidence 457888888899999999999999999999999999999995 44333332 2578999999999984
Q ss_pred CCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEe----ccCCCCCCCCCCee
Q 016634 178 LCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRK----QTGSYLDGAAPDGV 253 (385)
Q Consensus 178 ~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~----~~g~~~~~~~~dGI 253 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..++ .|||++. +. .| .....|||
T Consensus 118 -------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~v~~-~Fg~~~~~~~~~~-~f-~~~~~dGi 171 (375)
T 1miq_A 118 -------------GTKVDITYGSG--TVKGFFSKDLVTLGHL--------SMPY-KFIEVTDTDDLEP-IY-SSVEFDGI 171 (375)
T ss_dssp -------------EEEEEEEETTE--EEEEEEEEEEEEETTE--------EEEE-EEEEEEECGGGTT-HH-HHSCCCEE
T ss_pred -------------CcEEEEEeCCC--eEEEEEEEEEEEEcCc--------eECc-EEEEEEecccccc-cc-ccCCCceE
Confidence 48999999997 4899999999999875 4577 9999998 54 33 22356999
Q ss_pred eecCCCCCC------hHHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEE
Q 016634 254 MGLGLGDVS------VPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCI 323 (385)
Q Consensus 254 lGLg~~~~S------~~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isV 323 (385)
||||++.++ +..+|++||++ +++||+||.++ ..|.|+||++|+.+ .+.+.|+|+... .+|.|.|+ |+|
T Consensus 172 lGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~L~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~-i~v 249 (375)
T 1miq_A 172 LGLGWKDLSIGSIDPIVVELKNQNKIDNALFTFYLPVHDVHAGYLTIGGIEEKFYEGNITYEKLNHD-LYWQIDLD-VHF 249 (375)
T ss_dssp EECSSCCTTCSSCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEEBSSS-SSSEEEEE-EEE
T ss_pred EeCCCCcccccCCCCHHHHHHhccCcCCCEEEEEecCCCCCCeEEEEcccCHHHcCCceEEEecCCC-ceEEEEEE-EEE
Confidence 999998765 46679999999 79999999875 37999999999876 568888888765 89999999 999
Q ss_pred cCeEeecCCceEEEcCcccccccCHHHHHHHHHHHHHhhccccccccccccccccc
Q 016634 324 GNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYN 379 (385)
Q Consensus 324 g~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~ 379 (385)
|++.+ ....+||||||++++||+++|++|.++|.... ..........|++
T Consensus 250 ~g~~~--~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~~~----~~~~g~~~~~C~~ 299 (375)
T 1miq_A 250 GKQTM--EKANVIVDSGTTTITAPSEFLNKFFANLNVIK----VPFLPFYVTTCDN 299 (375)
T ss_dssp TTEEE--EEEEEEECTTBSSEEECHHHHHHHHHHHTCEE----CTTSSCEEEETTC
T ss_pred CCEEc--ccceEEecCCCccEEcCHHHHHHHHHHhCCcc----cCCCCeEEEECCC
Confidence 99988 56789999999999999999999988775432 1112224457886
No 22
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=100.00 E-value=2.1e-40 Score=323.22 Aligned_cols=225 Identities=24% Similarity=0.416 Sum_probs=187.8
Q ss_pred eeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC---CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCC
Q 016634 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ---CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCS 175 (385)
Q Consensus 99 ~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~---c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~ 175 (385)
.+++.+ .+..|+++|.||||||+|.|++||||+++||+|. |..|..... ...|..++.|+|++|+|++.+.
T Consensus 4 ~~~l~~-~~~~Y~~~i~iGtP~q~~~v~~DTGSs~~Wv~~~~~~C~~~~~~~~---~~~C~~~~~y~~~~SsT~~~~~-- 77 (342)
T 3pvk_A 4 PVTLHN-EQVTYAADITVGSNNQKLNVIVDTGSSDLWVPDVNVDCQVTYSDQT---ADFCKQKGTYDPSGSSASQDLN-- 77 (342)
T ss_dssp EEEEEE-CSSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECCCSTTCC---TTGGGTTCCBCGGGCTTCEEEE--
T ss_pred ceEEec-CCcEEEEEEEEcCCCcEEEEEEECCCcceEEEcCCCCCcccccccc---cCCCCCCCcCCCccCcceeecC--
Confidence 455544 3678999999999999999999999999999974 554432110 0123346899999999999863
Q ss_pred CcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeee
Q 016634 176 HPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMG 255 (385)
Q Consensus 176 ~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlG 255 (385)
|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++... ..+||||
T Consensus 78 ----------------~~~~i~Yg~g-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~-------~~~GilG 125 (342)
T 3pvk_A 78 ----------------TPFKIGYGDG-SSSQGTLYKDTVGFGGV--------SIKNQVLADVDSTS-------IDQGILG 125 (342)
T ss_dssp ----------------EEEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEES-------SSSCEEE
T ss_pred ----------------CeEEEEecCC-CeEEEEEEEEEEEECCE--------EecceEEEEEEccC-------CCccEEE
Confidence 8999999996 67999999999999975 56899999998764 4599999
Q ss_pred cCCCC-------CChHHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEc
Q 016634 256 LGLGD-------VSVPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIG 324 (385)
Q Consensus 256 Lg~~~-------~S~~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg 324 (385)
||++. .+++.+|+++|+| +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... .+|.|+|++|+|+
T Consensus 126 Lg~~~~~~~~~~~~~~~~L~~qg~i~~~~fs~~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~ 204 (342)
T 3pvk_A 126 VGYKTNEAGGSYDNVPVTLKKQGVIAKNAYSLYLNSPDAATGQIIFGGVDNAKYSGSLIALPVTSD-RELRISLGSVEVS 204 (342)
T ss_dssp CSCGGGCSSCSSCCHHHHHHHTTSSSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEECCCS-SSCEEEEEEEEET
T ss_pred ecCccccccccCCcHHHHHHhcCCCCCceEEEEeCCCCCCCcEEEECccCccceeeeeEEeecCcc-ceEEEEEeEEEEC
Confidence 99987 4689999999999 79999999864 46999999999986 567888887765 6999999999999
Q ss_pred CeEeecCCceEEEcCcccccccCHHHHHHHHHHHHHhh
Q 016634 325 NSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLV 362 (385)
Q Consensus 325 ~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~ 362 (385)
++.+......+||||||++++||+++|++|.++|....
T Consensus 205 g~~~~~~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~ 242 (342)
T 3pvk_A 205 GKTINTDNVDVLLDSGTTITYLQQDLADQIIKAFNGKL 242 (342)
T ss_dssp TEEEEEEEEEEEECTTCSSEEECHHHHHHHHHHTTCEE
T ss_pred CEEecCCCceEEEeCCCCCeecCHHHHHHHHHHcCCee
Confidence 99987656789999999999999999999888775544
No 23
>2ewy_A Beta-secretase 2; BACE2, aspartic protease, hydrolase; HET: DBO; 3.10A {Homo sapiens}
Probab=100.00 E-value=1.5e-40 Score=329.30 Aligned_cols=240 Identities=21% Similarity=0.262 Sum_probs=191.0
Q ss_pred EeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCC
Q 016634 101 FFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLC 179 (385)
Q Consensus 101 ~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C 179 (385)
++.+..+..||++|.||||||+|.|+|||||+++||+|. |..| ++.|||++|+||+.+
T Consensus 6 ~l~~~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~f~~~~SsT~~~~------- 64 (383)
T 2ewy_A 6 NLQGDSGRGYYLEMLIGTPPQKLQILVDTGSSNFAVAGTPHSYI--------------DTYFDTERSSTYRSK------- 64 (383)
T ss_dssp CEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCBTTB--------------SCCCCGGGCTTCEEE-------
T ss_pred eccCCCCCcEEEEEEecCCCceEEEEEecCCCceEEecCCCCcc--------------ccCcccccCccceeC-------
Confidence 455666788999999999999999999999999999995 5443 378999999999985
Q ss_pred CCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCC
Q 016634 180 KSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLG 259 (385)
Q Consensus 180 ~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~ 259 (385)
.|.|.+.|++| ++.|.+++|+|+|++.. .....+.|+|.....+.|......|||||||++
T Consensus 65 -----------~~~~~i~Yg~G--s~~G~~~~Dtv~i~~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGilGLg~~ 125 (383)
T 2ewy_A 65 -----------GFDVTVKYTQG--SWTGFVGEDLVTIPKGF------NTSFLVNIATIFESENFFLPGIKWNGILGLAYA 125 (383)
T ss_dssp -----------EEEEEEECSSC--EEEEEEEEEEEEETTTE------EEEEEEEEEEEEEEESCSCTTCCCCEEEECSCG
T ss_pred -----------CceEEEEECCc--EEEEEEEEEEEEECCCc------cceeEEEEEEEEeecceeeccCcCceEEecCch
Confidence 38999999997 57899999999998641 122356789987766655444567999999998
Q ss_pred CCCh--------HHHHHHcCCCCCceEEeecC---------CCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEE
Q 016634 260 DVSV--------PSLLAKAGLIQNSFSICFDE---------NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESY 321 (385)
Q Consensus 260 ~~S~--------~~~l~~~g~i~~~FS~cl~~---------~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~i 321 (385)
.++. ..+|++|+.++++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|
T Consensus 126 ~~s~~~~~~~~~~~~l~~q~~i~~~FS~~l~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~~i 204 (383)
T 2ewy_A 126 TLAKPSSSLETFFDSLVTQANIPNVFSMQMCGAGLPVAGSGTNGGSLVLGGIEPSLYKGDIWYTPIKEE-WYYQIEILKL 204 (383)
T ss_dssp GGCSSCTTSCCHHHHHHHHHTCCSCEEEEECCC---------CCEEEEETSCCGGGCCSCEEEEECSSB-TTBBCCEEEE
T ss_pred hcccccccccCHHHHHHHccCCCcceEEEeeccccccccCCCCCeEEEeCccchhhccCccEEEecCCC-ceEEEEEEEE
Confidence 7653 45788888888899999852 257999999999876 567888887765 7999999999
Q ss_pred EEcCeEeec--C---CceEEEcCcccccccCHHHHHHHHHHHHHhhcccccccc--ccccccccccc
Q 016634 322 CIGNSCLTQ--S---GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNAR 381 (385)
Q Consensus 322 sVg~~~~~~--~---~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~s 381 (385)
+||++.+.. . ...+||||||++++||+++|++|.++|..+....+.+.. ......||+..
T Consensus 205 ~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~ 271 (383)
T 2ewy_A 205 EIGGQSLNLDCREYNADKAIVDSGTTLLRLPQKVFDAVVEAVARASLIPEFSDGFWTGSQLACWTNS 271 (383)
T ss_dssp EETTEECCCCTTTTTSSCEEECTTCSSEEEEHHHHHHHHHHHHHTTCSSCCCHHHHHTSEEEEECSS
T ss_pred EECCEEccccccccCCccEEEEcCCccccCCHHHHHHHHHHHhhhcccccCccccccccccccccCC
Confidence 999998752 1 357999999999999999999999999887654332211 11346798753
No 24
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=100.00 E-value=3.6e-40 Score=321.41 Aligned_cols=231 Identities=23% Similarity=0.339 Sum_probs=190.3
Q ss_pred eeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeec-----C-CCCCCCCCcccccccCCCCCCCCCCCCCCCccc
Q 016634 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC-----Q-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNV 172 (385)
Q Consensus 99 ~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c-----~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v 172 (385)
.+++.+. +..|+++|.||||||+|.|++||||+++||++ . |..|. .++.|+|++|+||+.+
T Consensus 4 ~~~l~~~-~~~Y~~~i~iGtP~Q~~~v~~DTGSs~~Wv~~~~~~C~~~~~C~------------~~~~y~~~~SsT~~~~ 70 (339)
T 3fv3_A 4 SLSLINE-GPSYASKVSVGSNKQQQTVIIDTGSSDFWVVDSNAQCGKGVDCK------------SSGTFTPSSSSSYKNL 70 (339)
T ss_dssp EEEEEEC-SSSEEEEEEETTTTEEEEEEEETTCCCEEEEEEEEEECTTCCTT------------TTCCBCGGGCTTCEEE
T ss_pred eeEEEcC-CCEEEEEEEEcCCCcEEEEEEeCCCCceEEecCCCCCCCCCCCC------------CCCcCCCccCcceeeC
Confidence 4566544 56899999999999999999999999999995 3 33343 3578999999999986
Q ss_pred cCCCcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCe
Q 016634 173 SCSHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDG 252 (385)
Q Consensus 173 ~C~~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dG 252 (385)
. |.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++...+ .+|
T Consensus 71 ~------------------~~~~i~Yg~g-s~~~G~~~~D~v~~g~~--------~v~~~~fg~~~~~~~-------~~G 116 (339)
T 3fv3_A 71 G------------------AAFTIRYGDG-STSQGTWGKDTVTINGV--------SITGQQIADVTQTSV-------DQG 116 (339)
T ss_dssp E------------------EEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEESS-------SSC
T ss_pred C------------------ceEEEEECCC-ceEEEEEEEEEEEECCE--------EECceEEEEEEecCC-------Cce
Confidence 3 8999999996 78999999999999975 568999999998753 389
Q ss_pred eeecCCCCCC----------------hHHHHHHcCCC-CCceEEeecCC--CcceEEEcccCCCC-ceeeeeeecCCCCc
Q 016634 253 VMGLGLGDVS----------------VPSLLAKAGLI-QNSFSICFDEN--DSGSVFFGDQGPAT-QQSTSFLPIGEKYD 312 (385)
Q Consensus 253 IlGLg~~~~S----------------~~~~l~~~g~i-~~~FS~cl~~~--~~G~l~fG~~d~~~-~~~tp~v~~~~~~~ 312 (385)
|||||++..+ ++.+|+++|+| +++||+||.+. ..|.|+||++|+.+ .+++.|+|+... .
T Consensus 117 ilGLg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~g~i~~~~fsl~l~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~ 195 (339)
T 3fv3_A 117 ILGIGYTSNEAVYDTSGRQTTPNYDNVPVTLKKQGKIRTNAYSLYLNSPSAETGTIIFGGVDNAKYSGKLVAEQVTSS-Q 195 (339)
T ss_dssp EEECSCGGGCCCBCTTSCBCSCCCCCHHHHHHHTTSCSSSEEEEECCCTTCSEEEEEETEEETTSBSSCCEEEEBCCS-S
T ss_pred eEEecCccccccccccccccCccCCcHHHHHHHCCCCCCceEEEEECCCCCCCeEEEEeeechHHeecceEEEecccC-c
Confidence 9999998653 78899999999 79999999875 47999999999986 567788887765 6
Q ss_pred cEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHHHHHHHHHHHHHhhccccccccccccccccc
Q 016634 313 AYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQGNSWKYCYN 379 (385)
Q Consensus 313 ~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~~~~~~Cy~ 379 (385)
+|.|+|++|+||++.+. ....+||||||++++||+++|++|.++|........ .........|++
T Consensus 196 ~~~v~l~~i~v~g~~~~-~~~~~iiDSGtt~~~lP~~~~~~i~~~~~~~~~~~~-~~~~~~~~~C~~ 260 (339)
T 3fv3_A 196 ALTISLASVNLKGSSFS-FGDGALLDSGTTLTYFPSDFAAQLADKAGARLVQVA-RDQYLYFIDCNT 260 (339)
T ss_dssp SCEEEEEEEEESSCEEE-EEEEEEECTTBSSEEECHHHHHHHHHHHTCEEEEEE-TTEEEEEECTTC
T ss_pred cEEEEEEEEEECCEeec-CCccEEEeCCCCCEecCHHHHHHHHHHcCCEEcccc-ccCceEEEecCC
Confidence 99999999999999886 346899999999999999999999888875443210 112233457886
No 25
>2qp8_A Beta-secretase 1; BACE1, protease, alternative splicing, aspartyl protease, glycoprotein, hydrolase, membrane, transmembrane, zymogen; HET: TAR SC7; 1.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 2qk5_A* 2qmf_A* 2qmg_A* 2qmd_A* 4djx_A* 3l59_A* 3l5b_A* 3l5c_A* 3l58_A* 3l5d_A* 3l5f_A* 4dju_A* 4djv_A* 4djw_A* 3l5e_A* 4djy_A* 2zhv_A 2zhs_A 2zhr_A 2zhu_A ...
Probab=100.00 E-value=6.2e-40 Score=326.38 Aligned_cols=239 Identities=19% Similarity=0.228 Sum_probs=189.2
Q ss_pred eccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCC
Q 016634 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180 (385)
Q Consensus 102 ~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~ 180 (385)
+.+..+..||++|.||||+|+|.|+|||||+++||+|. |..| ++.|||++|+||+.+
T Consensus 15 l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~~c~~~--------------~~~y~~~~SsT~~~~-------- 72 (395)
T 2qp8_A 15 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPHPFL--------------HRYYQRQLSSTYRDL-------- 72 (395)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCCTTC--------------SCCCCGGGCTTCEEE--------
T ss_pred cCCCCCceEEEEEEecCCCceEEEEEecCCCceEEECCCCccc--------------cCCcCcccCCCceeC--------
Confidence 33455778999999999999999999999999999995 5333 378999999999985
Q ss_pred CCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCC
Q 016634 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260 (385)
Q Consensus 181 ~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~ 260 (385)
.|.|.+.|++| +..|.+++|+|+|++.. .+...+.|+|.....+.|......|||||||++.
T Consensus 73 ----------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~g~------~~~~~~~~~~~~~~~~~f~~~~~~dGIlGLg~~~ 134 (395)
T 2qp8_A 73 ----------RKGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAE 134 (395)
T ss_dssp ----------EEEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGG
T ss_pred ----------CceEEEEECCc--EEEEEEEeEEEEECCCC------CceEEEEEEEEEccCcccccccCccceEEcCchh
Confidence 38999999997 56899999999998420 1222467888876655554445679999999987
Q ss_pred CC--------hHHHHHHcCCCCCceEEeecC------------CCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEe
Q 016634 261 VS--------VPSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVE 319 (385)
Q Consensus 261 ~S--------~~~~l~~~g~i~~~FS~cl~~------------~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~ 319 (385)
++ ++.+|++|++++++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|.|.|+
T Consensus 135 ~s~~~~~~~~~~~~l~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~~~v~l~ 213 (395)
T 2qp8_A 135 IARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIV 213 (395)
T ss_dssp GCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEE
T ss_pred hccCCCCCCCHHHHHHHccCCcceEEEEeccccccccccccccCCCcEEEECCcCcccccCceEEeccCCC-ceEEEEEE
Confidence 65 355899999998899999964 257999999999876 567888887765 89999999
Q ss_pred EEEEcCeEeec-----CCceEEEcCcccccccCHHHHHHHHHHHHHhhcccccccc--ccccccccccc
Q 016634 320 SYCIGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNAR 381 (385)
Q Consensus 320 ~isVg~~~~~~-----~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~s 381 (385)
+|+||++.+.. ....+||||||++++||+++|++|.++|.......+.... ......|++.+
T Consensus 214 ~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~i~~~~~~~~~~~~~~~~~~~~C~~~~ 282 (395)
T 2qp8_A 214 RVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 282 (395)
T ss_dssp EEEETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTT
T ss_pred EEEECCEEcccCccccCCceEEEEcCCCcEecCHHHHHHHHHHHhhhcccccCCccccccccccccccc
Confidence 99999998752 1357999999999999999999999999887654332111 01135798754
No 26
>1t6e_X Xylanase inhibitor; two beta-barrel domain structure, hydrolase inhibitor; 1.70A {Triticum aestivum} SCOP: b.50.1.2 PDB: 1t6g_A 2b42_A 3hd8_A
Probab=100.00 E-value=4.1e-40 Score=326.28 Aligned_cols=245 Identities=19% Similarity=0.377 Sum_probs=183.5
Q ss_pred eEec-cccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 016634 100 HFFG-NQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (385)
Q Consensus 100 ~~~~-~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~ 178 (385)
+|+. +..+.+||++|.|||| |+|||||+++||+|. .| .+|+.++|+++.
T Consensus 5 ~pv~~~~~~~~Y~~~i~iGtP-----v~~DTGSs~lWv~c~--~~-----------------------~~~~~~~C~s~~ 54 (381)
T 1t6e_X 5 APVTKDPATSLYTIPFHDGAS-----LVLDVAGPLVWSTCD--GG-----------------------QPPAEIPCSSPT 54 (381)
T ss_dssp EEEEECTTTCCEEEEEETTEE-----EEEETTCCCEEECCC--TT-----------------------CCCCCCBTTSHH
T ss_pred EeEEecCCCcEEEEEEeCCCE-----EEEECCCCceEEeCC--CC-----------------------CCCCccCCCCch
Confidence 4554 6778899999999998 999999999999994 22 124556677777
Q ss_pred CCC-----CCCCCCC-------CCCC-ceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccc----eEEEEEEecc
Q 016634 179 CKS-----RSSCKSL-------KDPC-PYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSS----VIIGCGRKQT 241 (385)
Q Consensus 179 C~~-----~~~C~~~-------~~~c-~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~----~~fGc~~~~~ 241 (385)
|.. ...|... ++.| .|.+.|++| +.++|.+++|+|+|++.++. ...++ +.|||++.+.
T Consensus 55 C~~~~~~~~~sc~~~~~~~~~~~~~c~~f~i~YgdG-s~~~G~l~~Dtv~ig~~~g~----~~v~~~~~~~~Fg~~~~~~ 129 (381)
T 1t6e_X 55 CLLANAYPAPGCPAPSCGSDKHDKPCTAYPYNPVSG-ACAAGSLSHTRFVANTTDGS----KPVSKVNVGVLAACAPSKL 129 (381)
T ss_dssp HHHHHSSCCTTCCCCCC------CBCEECCBCTTTC-CBCCEEEEEEEEEEEEESSS----SEEEEEEEEEEEEECCGGG
T ss_pred hccccCCCCCCCCCccCCcCcCCCccccccccccCC-ceeeEEEEEEEEEeeccCCC----ccccceeeeeEeecCcccc
Confidence 743 2345431 2357 599999996 66799999999999864321 12333 4789998863
Q ss_pred CCCCCCCCCCeeeecCCCCCChHHHHHHcCCCCCceEEeecCCCcceEEEcccCCC---Cce---eeeeeecCCCCccEE
Q 016634 242 GSYLDGAAPDGVMGLGLGDVSVPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPA---TQQ---STSFLPIGEKYDAYF 315 (385)
Q Consensus 242 g~~~~~~~~dGIlGLg~~~~S~~~~l~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~---~~~---~tp~v~~~~~~~~y~ 315 (385)
+..+ ....|||||||++.+|++.||+++++++++||+||.++..|.|+||+.+.. +.+ ++|++..+.. ++|.
T Consensus 130 ~~~~-~~~~dGIlGLg~~~~s~~~ql~~~~~~~~~FS~~L~~~~~G~l~fGg~~~~~~~~~g~l~~tPl~~~~~~-~~y~ 207 (381)
T 1t6e_X 130 LASL-PRGSTGVAGLANSGLALPAQVASAQKVANRFLLCLPTGGPGVAIFGGGPVPWPQFTQSMPYTPLVTKGGS-PAHY 207 (381)
T ss_dssp GTTS-CTTEEEEEECSSSTTSHHHHHHHHHTCCSEEEEECCSSSCEEEEESCCSCSCHHHHTTCCEEECBCCTTC-CSCE
T ss_pred cCCC-CCCCceEEEeCCCcchhHHHHhhhcccCceEEEEeCCCCCeeEEeCCcccccccccCcceeeccccCCCC-cceE
Confidence 2212 246799999999999999999999877999999999877899999998763 233 4555433222 4677
Q ss_pred EeEeEEEEcCeEeecC-----CceEEEcCcccccccCHHHHHHHHHHHHHhhcc--------ccccccccccccccccc
Q 016634 316 VGVESYCIGNSCLTQS-----GFQALVDSGASFTFLPTEIYAEVVVKFDKLVSS--------KRISLQGNSWKYCYNAR 381 (385)
Q Consensus 316 v~l~~isVg~~~~~~~-----~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~--------~~~~~~~~~~~~Cy~~s 381 (385)
|+|++|+||++.+... ..++||||||++++||+++|++|.++|.+++.. .+.......++.||+.+
T Consensus 208 v~l~~i~vg~~~~~~~~~~~~~~~~iiDTGTtl~~lp~~~~~~l~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~C~~~~ 286 (381)
T 1t6e_X 208 ISARSIVVGDTRVPVPEGALATGGVMLSTRLPYVLLRPDVYRPLMDAFTKALAAQHANGAPVARAVEAVAPFGVCYDTK 286 (381)
T ss_dssp ECEEEEEETTEECCCCTTCSCTTCEEECSSCSSEEECHHHHHHHHHHHHHHHHHC-------CCEECCCTTCSCEEEGG
T ss_pred EEEEEEEEcCEEecCCHHHccCCCEEEECCCccEEeCHHHHHHHHHHHHHhhcccccccccccccCCCCCCCCccCCCC
Confidence 9999999999987532 246999999999999999999999999998863 22212234678999865
No 27
>3vf3_A Beta-secretase 1; structure-based drug design, hydrolase-hydrolase inhibitor C; HET: 0GS; 1.48A {Homo sapiens} PDB: 2f3e_A* 2f3f_A* 1ym2_A* 3dv1_A* 3dv5_A* 3k5c_A* 3k5f_A* 3k5g_A* 3pi5_A* 3qbh_A* 3duy_A* 3veu_A* 3vg1_A* 4d83_A* 4d88_A* 4d89_A* 4d8c_A* 3msk_A* 3k5d_A* 1ym4_A* ...
Probab=100.00 E-value=3.5e-39 Score=321.59 Aligned_cols=236 Identities=19% Similarity=0.225 Sum_probs=189.3
Q ss_pred ccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCC
Q 016634 105 QFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRS 183 (385)
Q Consensus 105 ~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~~ 183 (385)
..+..||++|.||||||+|.|+|||||+++||+|. | |. .++.|+|++|+||+..
T Consensus 25 ~~~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~~~c--~~------------~~~~y~~~~SsT~~~~----------- 79 (402)
T 3vf3_A 25 KSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDL----------- 79 (402)
T ss_dssp ETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEE-----------
T ss_pred CCCCEEEEEEEECCCCeEEEEEEeCCCCceEEccCCC--Cc------------ccCCcCcccCcccccC-----------
Confidence 34568999999999999999999999999999995 4 21 2478999999999985
Q ss_pred CCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC-
Q 016634 184 SCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS- 262 (385)
Q Consensus 184 ~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S- 262 (385)
.|.|.+.|++| ++.|.+++|+|+|++.. .+...+.|+|.....+.+......|||||||++.++
T Consensus 80 -------~~~~~i~Yg~G--s~~G~~~~D~v~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~~s~ 144 (402)
T 3vf3_A 80 -------RKGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAEIAR 144 (402)
T ss_dssp -------EEEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGGGCS
T ss_pred -------CCEEEEEECcE--EEEEEEEEEEEEECCcc------ccceeeeEEEEEccccccccCCCccceEEcCchhhcc
Confidence 48999999997 57999999999998531 122345688888777666555577999999997654
Q ss_pred -------hHHHHHHcCCCCCceEEeecC------------CCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEE
Q 016634 263 -------VPSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYC 322 (385)
Q Consensus 263 -------~~~~l~~~g~i~~~FS~cl~~------------~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~is 322 (385)
++.+|+++++|.++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|.|.|++|+
T Consensus 145 ~~~~~~~~~~~L~~q~~i~~~FS~~l~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~ 223 (402)
T 3vf3_A 145 PDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIVRVE 223 (402)
T ss_dssp SCTTSCCHHHHHHHHSCCCSCEEEEECCCC-------------EEEEESSCCGGGEEEEEEEEECSSB-TTBEECEEEEE
T ss_pred cCCcCCcHHHHHHHccCCccceEEEeecccccccccccccCCCCEEEeCCcCcccccCceEEEeCCcC-cEEEEEEeEEE
Confidence 456799999998999999963 246999999999987 568888888765 89999999999
Q ss_pred EcCeEeec-----CCceEEEcCcccccccCHHHHHHHHHHHHHhhccccccccc--cccccccccc
Q 016634 323 IGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQG--NSWKYCYNAR 381 (385)
Q Consensus 323 Vg~~~~~~-----~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~~--~~~~~Cy~~s 381 (385)
||++.+.. ....+||||||++++||+++|++|.++|.......+..... ..+..|++..
T Consensus 224 v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~~C~~~~ 289 (402)
T 3vf3_A 224 INGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 289 (402)
T ss_dssp ETTEECCCCGGGGGSSCEEECTTCCSEEEEHHHHHHHHHHHHHHTTTSCCCTTGGGTCSCEEEETT
T ss_pred ECCEEecccccccCCCeEEEECCCCcccCCHHHHHHHHHHHhhhccccccCccccccccccccccc
Confidence 99998753 24579999999999999999999999999886543332221 1256898754
No 28
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=100.00 E-value=1.3e-39 Score=316.60 Aligned_cols=222 Identities=18% Similarity=0.217 Sum_probs=185.3
Q ss_pred eeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 016634 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (385)
Q Consensus 99 ~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~ 178 (385)
.+++.|+.+..|+++|.|| ||+|.|++||||+++||+|. .|....|. +..++.|||++| |++..
T Consensus 8 ~~~l~n~~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~--~C~~~~C~-----~~~~~~y~~~~S-T~~~~------ 71 (330)
T 1yg9_A 8 YKLVHVFINTQYAGITKIG--NQNFLTVFDSTSCNVVVASQ--ECVGGACV-----CPNLQKYEKLKP-KYISD------ 71 (330)
T ss_dssp CSCEEEEECTTSEEEEEET--TEEEEEEEETTCCCEEEECT--TCCSGGGG-----STTCCCCCCSSC-EEEEE------
T ss_pred EeeeecCCCCEEEEEEEEC--CEEEEEEEeCCCcceEEecC--CCCCccCc-----ccccCccCCCCC-ceEEC------
Confidence 3567788888999999999 89999999999999999995 33322220 013578999999 99874
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 016634 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (385)
Q Consensus 179 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (385)
.|.|.+.|++| +..|.+++|+|+|++. ..+++.|||++.+...| .....|||||||+
T Consensus 72 ------------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~--------~~~~~~fg~~~~~~~~f-~~~~~~GilGLg~ 128 (330)
T 1yg9_A 72 ------------GNVQVKFFDTG--SAVGRGIEDSLTISQL--------TTSQQDIVLADELSQEV-CILSADVVVGIAA 128 (330)
T ss_dssp ------------EEEEEEETTTE--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEECTHH-HHTTCSEEEECSC
T ss_pred ------------CCEEEEEECCc--eEEEEEEEEEEEECCE--------EEcCeEEEEEEEccccc-ccccCceEEEcCc
Confidence 48999999997 5699999999999875 56899999999873223 2236799999999
Q ss_pred CCCC-------hHHHHHHcCCCCCceEEeecCC--C--cceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCe
Q 016634 259 GDVS-------VPSLLAKAGLIQNSFSICFDEN--D--SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNS 326 (385)
Q Consensus 259 ~~~S-------~~~~l~~~g~i~~~FS~cl~~~--~--~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~ 326 (385)
+.++ ++.+|+++|+++++||+||.++ . .|.|+||++|+.+ .+++.|+|+... .+|.|+|++|+||++
T Consensus 129 ~~~s~~~~~~~~~~~l~~qg~i~~~FS~~l~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~~i~v~~~ 207 (330)
T 1yg9_A 129 PGCPNALKGKTVLENFVEENLIAPVFSIHHARFQDGEHFGEIIFGGSDWKYVDGEFTYVPLVGD-DSWKFRLDGVKIGDT 207 (330)
T ss_dssp TTSCCTTSCCCHHHHHHHTTSSCSEEEEEEEECTTSCEEEEEEETSCCGGGEEEEEEEEEBSCT-TSCCEECSEEEETTE
T ss_pred chhccccCCCCHHHHHHhcCCCCceEEEEEcCCCCCCCCCEEEECCcCHHHccCceEEEECCCC-CEEEEEeCeEEECCE
Confidence 8877 5778999998899999999875 2 7999999999987 568888888764 899999999999999
Q ss_pred EeecCCceEEEcCcccccccCHHHHHHHHHHHHH
Q 016634 327 CLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDK 360 (385)
Q Consensus 327 ~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~ 360 (385)
.+......+||||||++++||+++|++|.++|..
T Consensus 208 ~~~~~~~~aiiDSGTs~~~lP~~~~~~l~~~~~~ 241 (330)
T 1yg9_A 208 TVAPAGTQAIIDTSKAIIVGPKAYVNPINEAIGC 241 (330)
T ss_dssp EEECTTCEEEECTTCSSEEEEHHHHHHHHHHHTC
T ss_pred EEcCCCcEEEEecCCccccCCHHHHHHHHHHhCC
Confidence 8765678899999999999999999999887743
No 29
>3qvc_A Histo-aspartic protease; HAP, plasmepsin, zymogen, hydrolase; 2.10A {Plasmodium falciparum} PDB: 3qvi_A* 3fns_A 3fnt_A* 3fnu_A*
Probab=100.00 E-value=1.4e-39 Score=328.34 Aligned_cols=218 Identities=19% Similarity=0.280 Sum_probs=184.8
Q ss_pred CceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCC
Q 016634 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSH 176 (385)
Q Consensus 97 ~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~ 176 (385)
...+++.|+.+..||++|.||||||+|.|++||||+++||+|. .|....|. .++.|||++|+|++..
T Consensus 126 ~~~~pL~n~~d~~Y~~~I~IGTPpQ~~~vi~DTGSs~lWV~s~--~C~s~~C~-------~~~~ydps~SsT~~~~---- 192 (451)
T 3qvc_A 126 FDNVELKDLANVLSFGEAKLGDNGQKFNFLFHTASSNVWVPSI--KCTSESCE-------SKNHYDSSKSKTYEKD---- 192 (451)
T ss_dssp -CCCCGGGGBCEEEEEEEEETTTTEEEEEEEESSBCSEEEEBT--TCCSGGGT-------TSCCBCGGGCTTCEEE----
T ss_pred CCccceeecCCCEEEEEEEECCCCcEEEEEEcCCCccEEEecC--CCCccccC-------CCCCCCCCCCcccccC----
Confidence 4567888999999999999999999999999999999999995 44333332 3578999999999984
Q ss_pred cCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEe----ccCCCCCCCCCCe
Q 016634 177 PLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRK----QTGSYLDGAAPDG 252 (385)
Q Consensus 177 ~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~----~~g~~~~~~~~dG 252 (385)
.|.|.+.|++| ++.|.+++|+|+|++. ..+ +.|||++. +.+ +. ....||
T Consensus 193 --------------~~~f~i~YgdG--s~~G~~~~Dtv~igg~--------~v~-~~Fg~a~~t~~~~~~-f~-~~~~dG 245 (451)
T 3qvc_A 193 --------------DTPVKLTSKAG--TISGIFSKDLVTIGKL--------SVP-YKFIEMTEIVGFEPF-YS-ESDVDG 245 (451)
T ss_dssp --------------EEEEEEECSSE--EEEEEEEEEEEEETTE--------EEE-EEEEEEEEEEECTTH-HH-HSCCCE
T ss_pred --------------CCEEEEEECCC--EEEEEEEEEEEEECCE--------EEE-EEEEEEEeccccCCC-cc-CCCCCE
Confidence 48999999997 4999999999999875 456 99999998 665 32 235699
Q ss_pred eeecCCCCC------ChHHHHHHcCCC-CCceEEeecCCC--cceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEE
Q 016634 253 VMGLGLGDV------SVPSLLAKAGLI-QNSFSICFDEND--SGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYC 322 (385)
Q Consensus 253 IlGLg~~~~------S~~~~l~~~g~i-~~~FS~cl~~~~--~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~is 322 (385)
|||||++.+ +++.+|+++|+| +++||+||.+.. .|.|+||++|+.+ .+++.|+|+... .+|.|.++ |+
T Consensus 246 ILGLg~~~~s~~~~~~~~~~L~~qg~I~~~~FS~~L~~~~~~~G~l~fGgiD~s~y~G~l~~~pv~~~-~~w~v~l~-I~ 323 (451)
T 3qvc_A 246 VFGLGWKDLSIGSIDPYIVELKTQNKIEQAVYSIYLPPENKNKGYLTIGGIEERFFDGPLNYEKLNHD-LMWQVDLD-VH 323 (451)
T ss_dssp EEECSSBCSSSSCCCCHHHHHHHTTSSSSSEEEEECCTTCTTEEEEEESSCCGGGEEEEEEEEECSST-TSSEEEEE-EE
T ss_pred EEecCCCcccccCCCCHHHHHHHcCCCCCCEEEEEEcCCCCCCCEEEECCcchhhcCCceEEEEcccC-CeeEEEEE-EE
Confidence 999999865 457789999999 899999998753 6999999999987 578888888765 89999999 99
Q ss_pred EcCeEeecCCceEEEcCcccccccCHHHHHHHHHHH
Q 016634 323 IGNSCLTQSGFQALVDSGASFTFLPTEIYAEVVVKF 358 (385)
Q Consensus 323 Vg~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~ 358 (385)
||++ ......+||||||++++||+++|++|.+++
T Consensus 324 Vgg~--~~~~~~aiiDSGTt~i~lP~~~~~~i~~~i 357 (451)
T 3qvc_A 324 FGNV--SSKKANVILDSATSVITVPTEFFNQFVESA 357 (451)
T ss_dssp ETTE--EEEEEEEEECTTBSSEEECHHHHHHHHTTT
T ss_pred ECCc--cCCCceEEEeCCCccccCCHHHHHHHHHHc
Confidence 9998 335678999999999999999998887655
No 30
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=100.00 E-value=1.2e-39 Score=316.20 Aligned_cols=213 Identities=20% Similarity=0.331 Sum_probs=178.5
Q ss_pred cccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 016634 106 FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184 (385)
Q Consensus 106 ~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~~~ 184 (385)
.+.+|+++|.|| +|+|.|++||||+++||+|. |..|.. ..++.|+|++|+ ++.
T Consensus 12 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c----------~~~~~y~~~~Ss-~~~------------- 65 (325)
T 1ibq_A 12 NDEEYLTPVTVG--KSTLHLDFDTGSADLWVFSDELPSSEQ----------TGHDLYTPSSSA-TKL------------- 65 (325)
T ss_dssp TTSCEEEEEEEB--TEEEEEEEETTCCCEEEECTTSCHHHH----------TTSCCCBCCSSC-EEC-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCccceEeeCCCCcccc----------CCCCCCCchhcC-Ccc-------------
Confidence 467899999999 89999999999999999996 766531 135789999998 443
Q ss_pred CCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC--
Q 016634 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS-- 262 (385)
Q Consensus 185 C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S-- 262 (385)
+.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++.+.+.+......|||||||++.++
T Consensus 66 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 131 (325)
T 1ibq_A 66 -----SGYSWDISYGDG-SSASGDVYRDTVTVGGV--------TTNKQAVEAASKISSEFVQDTANDGLLGLAFSSINTV 131 (325)
T ss_dssp -----TTCBEEEECSSS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTSTTCCEEEECSCGGGCCC
T ss_pred -----CCCEEEEEeCCC-CEEEEEEEEeEEEECCE--------EEcceEEEEEEecCccccccCCCceEEEeCccccccc
Confidence 359999999996 66899999999999875 56899999999987666544467999999998765
Q ss_pred -------hHHHHHHcCCCCCceEEeecCCCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEeecCCce
Q 016634 263 -------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQ 334 (385)
Q Consensus 263 -------~~~~l~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~ 334 (385)
+..+|+++ +.+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|+|++|+||++.+....+.
T Consensus 132 ~p~~~~~~~~~l~~~-i~~~~FS~~l~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~~~~~~~~~~ 210 (325)
T 1ibq_A 132 QPKAQTTFFDTVKSQ-LDSPLFAVQLKHDAPGVYDFGYIDDSKYTGSITYTDADSSQGYWGFSTDGYSIGDGSSSSSGFS 210 (325)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEEEETTEEEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEECEEEETTSCCBSCCEE
T ss_pred CcCCCCCHHHHHHHh-cCCcEEEEEecCCCCceEEECCcChhhccCceEEEEcCCCCceEEEEECcEEECCeeccCCCce
Confidence 35778876 448999999998778999999999876 567777777543479999999999999888656789
Q ss_pred EEEcCcccccccCHHHHHHHHHHHH
Q 016634 335 ALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 335 ~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
+||||||++++||+++|++|.++|.
T Consensus 211 aiiDSGTt~~~lP~~~~~~i~~~i~ 235 (325)
T 1ibq_A 211 AIADTGTTLILLDDEIVSAYYEQVS 235 (325)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTST
T ss_pred EEEeCCCCcEeCCHHHHHHHHHhCC
Confidence 9999999999999999988876653
No 31
>3lpj_A Beta-secretase 1; alzheimer'S, aspartyl protease, hydrolase; HET: TLA Z75; 1.79A {Homo sapiens} PDB: 3lpi_A* 3lpk_A* 3ohf_A* 3ohh_A* 3r2f_A* 3skf_A* 3skg_A* 4fse_A* 2hiz_A* 2p83_A* 2va7_A* 2va5_A* 2va6_A*
Probab=100.00 E-value=5e-39 Score=325.51 Aligned_cols=239 Identities=19% Similarity=0.225 Sum_probs=193.9
Q ss_pred eccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCC
Q 016634 102 FGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCK 180 (385)
Q Consensus 102 ~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~ 180 (385)
+.+..+..||++|.||||||+|.|+|||||+++||+|. | |. .++.|+|++|+||+..
T Consensus 68 l~~~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWV~~~~c--c~------------~~~~y~~~~SsT~~~~-------- 125 (455)
T 3lpj_A 68 LRGKSGQGYYVEMTVGSPPQTLNILVDTGSSNFAVGAAPH--PF------------LHRYYQRQLSSTYRDL-------- 125 (455)
T ss_dssp EEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEECSCC--TT------------CSCCCCGGGCTTCEEE--------
T ss_pred ccCCCCCEEEEEEEECCCCeEEEEEEcCCCcceEEecccc--cc------------cCCcccCCCCCCcccC--------
Confidence 33455678999999999999999999999999999996 4 31 2478999999999985
Q ss_pred CCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCC
Q 016634 181 SRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGD 260 (385)
Q Consensus 181 ~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~ 260 (385)
.|.|.+.|++| ++.|.+++|+|+|++.. .+...+.|+|+....+.|......|||||||++.
T Consensus 126 ----------~~~~~i~Yg~G--s~~G~~~~Dtv~ig~~~------~~~~~~~~~~~~~~~~~~~~~~~~dGIlGLg~~~ 187 (455)
T 3lpj_A 126 ----------RKGVYVPYTQG--KWEGELGTDLVSIPHGP------NVTVRANIAAITESDKFFINGSNWEGILGLAYAE 187 (455)
T ss_dssp ----------EEEEEEECSSC--EEEEEEEEEEEECTTSC------SCEEEEEEEEEEEEESCSCTTCCCCEEEECSCGG
T ss_pred ----------CccEEEEeCCe--EEEEEEEEEEEEECCCc------ceeeEEEEEEEEccCcccccCCCcceEEEeCccc
Confidence 38999999997 56999999999998531 1233567999988777665555789999999976
Q ss_pred CC--------hHHHHHHcCCCCCceEEeecC------------CCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEe
Q 016634 261 VS--------VPSLLAKAGLIQNSFSICFDE------------NDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVE 319 (385)
Q Consensus 261 ~S--------~~~~l~~~g~i~~~FS~cl~~------------~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~ 319 (385)
++ ++.+|++|++|.++||+||.+ ...|.|+||++|+.+ .+.+.|+|+... .+|.|.++
T Consensus 188 ~s~~~~~~~~~~~~L~~q~~i~~~FS~~L~~~~~~~~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~-~~w~v~l~ 266 (455)
T 3lpj_A 188 IARPDDSLEPFFDSLVKQTHVPNLFSLQLCGAGFPLNQSEVLASVGGSMIIGGIDHSLYTGSLWYTPIRRE-WYYEVIIV 266 (455)
T ss_dssp GCSSCTTSCCHHHHHHHHSCCCSCEEEEECCCSSCCCHHHHHHSCCEEEEETSCCGGGEEEEEEEEECCSB-TTBBCCEE
T ss_pred cccccCCCCcHHHHHHHccCCCceeEEEeccccccccccccccCCCceEEECCcCcccccCceEEEecCCC-ceeEEEEe
Confidence 54 456799999998999999963 347999999999987 578888888765 89999999
Q ss_pred EEEEcCeEeec-----CCceEEEcCcccccccCHHHHHHHHHHHHHhhcccccccc--ccccccccccc
Q 016634 320 SYCIGNSCLTQ-----SGFQALVDSGASFTFLPTEIYAEVVVKFDKLVSSKRISLQ--GNSWKYCYNAR 381 (385)
Q Consensus 320 ~isVg~~~~~~-----~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~~~~~~~~~~--~~~~~~Cy~~s 381 (385)
+|+||++.+.. ....+||||||++++||+++|++|.++|.......+.... ...+..|++..
T Consensus 267 ~i~v~g~~~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~i~~~i~~~~~~~~~~~~~~~g~~~~C~~~~ 335 (455)
T 3lpj_A 267 RVEINGQDLKMDCKEYNYDKSIVDSGTTNLRLPKKVFEAAVKSIKAASSTEKFPDGFWLGEQLVCWQAG 335 (455)
T ss_dssp EEEETTEECCCCGGGGGSSCEEECTTSSSEEEEHHHHHHHHHHHHHHTTTSCCCHHHHTTCSCEEESTT
T ss_pred EEEECCEEccccccccCCCeEEEECCCcceeCCHHHHHHHHHHhhhhccccccCcccccCcceeccccc
Confidence 99999998753 2457999999999999999999999999988764333221 12256898754
No 32
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=100.00 E-value=3.5e-39 Score=312.71 Aligned_cols=212 Identities=19% Similarity=0.313 Sum_probs=177.5
Q ss_pred cccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 016634 106 FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184 (385)
Q Consensus 106 ~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~~~ 184 (385)
.+.+|+++|.|| ||+|.|++||||+++||+|. |..|. | ..++.|+|++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~q~~~v~~DTGSs~lWv~~~~C~~~~---c-------~~~~~y~~~~Ss-~~~------------- 66 (323)
T 1izd_A 13 NDEEYITQVTVG--DDTLGLDFDTGSADLWVFSSQTPSSE---R-------SGHDYYTPGSSA-QKI------------- 66 (323)
T ss_dssp GGCCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHH---H-------TTCCCBCCCTTC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEcCCCcceEEecCCCCccc---c-------cCCCCCCccccC-Ccc-------------
Confidence 467899999999 89999999999999999996 76553 1 135789999998 553
Q ss_pred CCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCCh-
Q 016634 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVSV- 263 (385)
Q Consensus 185 C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S~- 263 (385)
+.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++.+.+.+......|||||||++.++.
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1izd_A 67 -----DGATWSISYGDG-SSASGDVYKDKVTVGGV--------SYDSQAVESAEKVSSEFTQDTANDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHHCTTCCEEEECSCGGGCCC
T ss_pred -----CCCeEEEEcCCC-CeEEEEEEEEEEEECCE--------EECceEEEEEEeccccccccCCCceEEecCccccccc
Confidence 359999999996 56899999999999875 568999999999876554434679999999986653
Q ss_pred --------HHHHHHcCCCCCceEEeecCCCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEeecCCce
Q 016634 264 --------PSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQ 334 (385)
Q Consensus 264 --------~~~l~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~ 334 (385)
..+|+++ +.+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|+|++|+||+ .+....+.
T Consensus 133 ~p~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~-~~~~~~~~ 210 (323)
T 1izd_A 133 QPTPQKTFFDNVKSS-LSEPIFAVALKHNAPGVYDFGYTDSSKYTGSITYTDVDNSQGFWGFTADGYSIGS-DSSSDSIT 210 (323)
T ss_dssp BSSCCCCHHHHHGGG-SSSSEEEEECCTTSCEEEEESSCCTTSEEEEEEEEECBCTTSSCEEEESEEEETT-EEECCCEE
T ss_pred CCCCCCCHHHHHHHh-ccCcEEEEEccCCCCCEEEECCcCccccccceEEEECCCCCceEEEEECeEEECC-cccCCCce
Confidence 5678776 448999999998778999999999987 568888888644489999999999999 66656789
Q ss_pred EEEcCcccccccCHHHHHHHHHHHH
Q 016634 335 ALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 335 ~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
+||||||++++||+++|++|.++|.
T Consensus 211 aiiDSGTs~~~lp~~~~~~i~~~i~ 235 (323)
T 1izd_A 211 GIADTGTTLLLLDDSIVDAYYEQVN 235 (323)
T ss_dssp EEECTTCCSEEECHHHHHHHHTTST
T ss_pred EEEeCCCcceeCCHHHHHHHHHhCC
Confidence 9999999999999999988876653
No 33
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=100.00 E-value=3.9e-39 Score=312.39 Aligned_cols=211 Identities=18% Similarity=0.332 Sum_probs=175.3
Q ss_pred cccEEEEEEEecCCCeEEEEEEEcCCCceeeecC-CCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcCCCCCCC
Q 016634 106 FYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ-CIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPLCKSRSS 184 (385)
Q Consensus 106 ~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~-c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~C~~~~~ 184 (385)
.+..|+++|.|| ||+|.|++||||+++||+|. |..|.. ..++.|||++|+ ++.
T Consensus 13 ~~~~Y~~~i~iG--~Q~~~v~~DTGSs~lWv~~~~C~~~~c----------~~~~~y~~~~Ss-~~~------------- 66 (323)
T 1bxo_A 13 NDEEYITPVTIG--GTTLNLNFDTGSADLWVFSTELPASQQ----------SGHSVYNPSATG-KEL------------- 66 (323)
T ss_dssp GGSCEEEEEEET--TEEEEEEEETTCCCEEECBTTSCHHHH----------TTSCCBCHHHHC-EEE-------------
T ss_pred CCCEEEEEEEEC--CEEEEEEEeCCCcceEEecCCCCchhc----------cCCCCCCcccCC-ccc-------------
Confidence 467899999999 89999999999999999996 766531 135889999998 553
Q ss_pred CCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC--
Q 016634 185 CKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS-- 262 (385)
Q Consensus 185 C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S-- 262 (385)
+.|.|.+.|++| +.+.|.+++|+|+|++. ..+++.|||++.+++.+......|||||||++.++
T Consensus 67 -----~~~~~~i~Yg~G-s~~~G~~~~D~v~ig~~--------~v~~~~fg~~~~~~~~~~~~~~~~GilGLg~~~~s~~ 132 (323)
T 1bxo_A 67 -----SGYTWSISYGDG-SSASGNVFTDSVTVGGV--------TAHGQAVQAAQQISAQFQQDTNNDGLLGLAFSSINTV 132 (323)
T ss_dssp -----EEEEEEEECTTS-CEEEEEEEEEEEEETTE--------EEEEEEEEEEEEECHHHHTCTTCSEEEECSCGGGCCC
T ss_pred -----CCCeEEEEeCCC-CeEEEEEEEEEEEECCE--------EECcEEEEEEEecCcccccCCCCceEEEeCccccccc
Confidence 359999999996 56899999999999875 56899999999987765544467999999997654
Q ss_pred -------hHHHHHHcCCCCCceEEeecCCCcceEEEcccCCCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEeecCCce
Q 016634 263 -------VPSLLAKAGLIQNSFSICFDENDSGSVFFGDQGPAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQ 334 (385)
Q Consensus 263 -------~~~~l~~~g~i~~~FS~cl~~~~~G~l~fG~~d~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~ 334 (385)
+..+|+++ +.+++||+||.++..|.|+||++|+.+ .+++.|+|+.....+|.|+|++|+||+ +......
T Consensus 133 ~~~~~~~~~~~l~~~-i~~~~FS~~L~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~w~v~l~~i~v~~--~~~~~~~ 209 (323)
T 1bxo_A 133 QPQSQTTFFDTVKSS-LAQPLFAVALKHQQPGVYDFGFIDSSKYTGSLTYTGVDNSQGFWSFNVDSYTAGS--QSGDGFS 209 (323)
T ss_dssp BSSCCCCHHHHHGGG-BSSSEEEEECCSSSCEEEEESSCCGGGBSSCCEEEECBCTTSSCEEEEEEEEETT--EEEEEEE
T ss_pred ccCCCCCHHHHHHHh-cCCcEEEEEEeCCCCceEEEeCcChhhccCceEEEECCCCCCeEEEEEeeEEECC--ccCCCce
Confidence 35678776 448999999998778999999999876 567777777533479999999999999 4445678
Q ss_pred EEEcCcccccccCHHHHHHHHHHHH
Q 016634 335 ALVDSGASFTFLPTEIYAEVVVKFD 359 (385)
Q Consensus 335 ~iiDSGTs~t~Lp~~~y~~l~~~~~ 359 (385)
+||||||++++||+++|++|.++|.
T Consensus 210 aiiDSGTs~~~lP~~~~~~l~~~i~ 234 (323)
T 1bxo_A 210 GIADTGTTLLLLDDSVVSQYYSQVS 234 (323)
T ss_dssp EEECTTCSSEEECHHHHHHHHTTST
T ss_pred EEEeCCCCceeCCHHHHHHHHHhCC
Confidence 9999999999999999988876653
No 34
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=100.00 E-value=7.6e-38 Score=305.23 Aligned_cols=207 Identities=23% Similarity=0.390 Sum_probs=173.0
Q ss_pred eeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCCCCcccccccCCCCCCCCCCCCCCCccccCCCcC
Q 016634 99 THFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAPLSASYYTSLDRNLSEYDPSSSSSSKNVSCSHPL 178 (385)
Q Consensus 99 ~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~~~~~~~~~~~~~~~~f~ps~SsT~~~v~C~~~~ 178 (385)
.+++.|+ +..|+++|.||||+|+|.|+|||||+++||+| .+.|+|++|+++.
T Consensus 4 ~~~l~n~-~~~Y~~~i~iGTP~q~~~v~~DTGSs~lWv~~-------------------~~~y~~s~Ss~~~-------- 55 (340)
T 1wkr_A 4 SVPATNQ-LVDYVVNVGVGSPATTYSLLVDTGSSNTWLGA-------------------DKSYVKTSTSSAT-------- 55 (340)
T ss_dssp EEEEEEC-SSCEEEEEEETTTTEEEEEEEETTCCCCEECS-------------------SSCCCCCTTCEEE--------
T ss_pred cEeeecc-CcEEEEEEEECCCCcEEEEEEeCCChhheecC-------------------CCccCCcCCcccc--------
Confidence 4677776 56899999999999999999999999999988 2569999887543
Q ss_pred CCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEeccCCCCCCCcccccceEEEEEEeccCCCCCCCCCCeeeecCC
Q 016634 179 CKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLASFSKHAPQSSVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGL 258 (385)
Q Consensus 179 C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~~~~~~~~~~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~ 258 (385)
.|.|.+.|++| +++|.+++|+|+|++. ..+++.|||++.+.+ + ...+||||||+
T Consensus 56 ------------~~~~~i~Yg~G--s~~G~~~~Dtv~~g~~--------~v~~~~fg~~~~~~~-~---~~~~GilGLg~ 109 (340)
T 1wkr_A 56 ------------SDKVSVTYGSG--SFSGTEYTDTVTLGSL--------TIPKQSIGVASRDSG-F---DGVDGILGVGP 109 (340)
T ss_dssp ------------EEEEEEECSSC--EEEEEEEEEEEEETTE--------EEEEEEEEEEEEEES-C---TTCSEEEECSC
T ss_pred ------------CceEEEEECCc--EEEEEEEEEEEEECCE--------EEcceEEEEEEccCC-C---cCCCcEEECCc
Confidence 38999999997 4899999999999875 568999999998766 3 25799999999
Q ss_pred CCCC--------------hHHHHHHcCCC-CCceEEeecCC-----CcceEEEcccCCCC-ceeeeeeecCCC---CccE
Q 016634 259 GDVS--------------VPSLLAKAGLI-QNSFSICFDEN-----DSGSVFFGDQGPAT-QQSTSFLPIGEK---YDAY 314 (385)
Q Consensus 259 ~~~S--------------~~~~l~~~g~i-~~~FS~cl~~~-----~~G~l~fG~~d~~~-~~~tp~v~~~~~---~~~y 314 (385)
+.++ ++.+|+++|+| +++||+||.+. ..|.|+||++|+.+ .+.+.|+|+... ..+|
T Consensus 110 ~~~s~~~~~~~~~~~~~~~~~~l~~~g~i~~~~FS~~l~~~~~~~~~~G~l~fGg~d~~~~~g~l~~~p~~~~~~~~~~w 189 (340)
T 1wkr_A 110 VDLTVGTLSPHTSTSIPTVTDNLFSQGTIPTNLLAVSFEPTTSESSTNGELTFGATDSSKYTGSITYTPITSTSPASAYW 189 (340)
T ss_dssp GGGGTTSEESCTTCCCCCHHHHHHHTTSSSSSEEEEECCCCSSSSEEEEEEEESSCCGGGCSSCCEEEECCSSTTGGGSS
T ss_pred cccccccccccccccCCCHHHHHHHcCCCCCCEEEEEecCCCCCCCCCcEEEEcccChhhcccceEEEECccCCCCcceE
Confidence 7654 35679999999 79999999853 36999999999875 456667766552 4799
Q ss_pred EEeEeEEEEcC-eEeecCCceEEEcCcccccccCHHHHHHHHHHHHHh
Q 016634 315 FVGVESYCIGN-SCLTQSGFQALVDSGASFTFLPTEIYAEVVVKFDKL 361 (385)
Q Consensus 315 ~v~l~~isVg~-~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~~ 361 (385)
.|. ++|+||+ +.+. ....+||||||++++||+++|++|.+++...
T Consensus 190 ~v~-~~i~v~~~~~l~-~~~~aiiDSGTt~~~lP~~~~~~l~~~~~a~ 235 (340)
T 1wkr_A 190 GIN-QSIRYGSSTSIL-SSTAGIVDTGTTLTLIASDAFAKYKKATGAV 235 (340)
T ss_dssp EEE-EEEEETTTEEEE-EEEEEEECTTBCSEEECHHHHHHHHHHHTCE
T ss_pred EEE-eeEEECCCeEcc-CCCeEEEeCCcccccCCHHHHHHHHHhhCCE
Confidence 999 9999998 8775 3468999999999999999999997776543
No 35
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=99.89 E-value=4.2e-23 Score=164.75 Aligned_cols=93 Identities=29% Similarity=0.455 Sum_probs=79.0
Q ss_pred CceeEeccccccEEEEEEEecCCCeEEEEEEEcCCCceeeecCCCCCCC--CCcccccccCCCCCCCCCCCCCCCccccC
Q 016634 97 SQTHFFGNQFYWLHYTWIDIGTPNVSFLVALDAGSNLLWVPCQCIQCAP--LSASYYTSLDRNLSEYDPSSSSSSKNVSC 174 (385)
Q Consensus 97 ~~~~~~~~~~~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~c~~C~~--~~~~~~~~~~~~~~~f~ps~SsT~~~v~C 174 (385)
...+++.|+.+..||++|.||||||+|.|+|||||+++||+|. .|.. ..| ..++.|||++|+|++..
T Consensus 2 ~~~~~l~n~~~~~Y~~~i~iGTP~Q~~~v~~DTGSs~lWv~~~--~C~~~~~~C-------~~~~~y~p~~SsT~~~~-- 70 (97)
T 1lya_A 2 PIPEVLKNYMDAQYYGEIGIGTPPQCFTVVFDTGSSNLWVPSI--HCKLLDIAC-------WIHHKYNSDKSSTYVKN-- 70 (97)
T ss_dssp CEEEEEEEETTTEEEEEEEETTTTEEEEEEEETTCCCEEEEBT--TCCTTCHHH-------HTSCCBCGGGCTTCEEE--
T ss_pred CceEeeEECCCCeEEEEEEECCCCeEEEEEEeCCCCceEEeEc--CccCccccc-------CCCCCCCchhCCCceeC--
Confidence 3457888888999999999999999999999999999999995 3432 122 12578999999999985
Q ss_pred CCcCCCCCCCCCCCCCCCceEEecCCCCceEEEEEEEEEEEecc
Q 016634 175 SHPLCKSRSSCKSLKDPCPYIADYSTEDTSSSGYLVDDILHLAS 218 (385)
Q Consensus 175 ~~~~C~~~~~C~~~~~~c~~~~~Y~~g~s~~~G~l~~Dtl~l~~ 218 (385)
.|.|.+.|++| ++.|.+++|+|+|++
T Consensus 71 ----------------~~~~~i~Yg~G--s~~G~~~~Dtv~i~g 96 (97)
T 1lya_A 71 ----------------GTSFDIHYGSG--SLSGYLSQDTVSVPC 96 (97)
T ss_dssp ----------------EEEEEEECSSC--EEEEEEEEEEEEESC
T ss_pred ----------------CCcEEEEECCc--EEEEEEEEEEEEECC
Confidence 48999999997 489999999999976
No 36
>1lya_B Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_B* 1lyw_B*
Probab=99.87 E-value=1.4e-21 Score=180.99 Aligned_cols=133 Identities=23% Similarity=0.357 Sum_probs=112.8
Q ss_pred ccccceEEEEEEeccCCCCCCCCCCeeeecCCCCCC------hHHHHHHcCCC-CCceEEeecCCC----cceEEEcccC
Q 016634 227 SVQSSVIIGCGRKQTGSYLDGAAPDGVMGLGLGDVS------VPSLLAKAGLI-QNSFSICFDEND----SGSVFFGDQG 295 (385)
Q Consensus 227 ~~~~~~~fGc~~~~~g~~~~~~~~dGIlGLg~~~~S------~~~~l~~~g~i-~~~FS~cl~~~~----~G~l~fG~~d 295 (385)
...+++.|||++.+.+.++.....|||||||++.++ +..+|+++|++ +++||+||.++. .|.|+||++|
T Consensus 3 ~~v~~~~Fg~~~~~~~~~f~~~~~dGilGLg~~~~s~~~~~~~~~~l~~qg~i~~~~FS~~l~~~~~~~~~G~l~fGg~d 82 (241)
T 1lya_B 3 VKVERQVFGEATKQPGITFIAAKFDGILGMAYPRISVNNVLPVFDNLMQQKLVDQNIFSFYLSRDPDAQPGGELMLGGTD 82 (241)
T ss_dssp EEEEEEEEEEEEECCSSTTTSCSSSEEEECSCGGGCGGGCCCHHHHHHHTTCSSSSEEEEEECSSTTCSSCEEEEETSCC
T ss_pred eEECCeEEEEEEEccCCccccccCCEEEECCcchhhccCCChHHHHHHHCCCCCCCEEEEEEeCCCCCCCCcEEEECCcC
Confidence 356899999999988765555578999999998765 45679999998 799999998752 7999999999
Q ss_pred CCC-ceeeeeeecCCCCccEEEeEeEEEEcCeEe-ecCCceEEEcCcccccccCHHHHHHHHHHHHH
Q 016634 296 PAT-QQSTSFLPIGEKYDAYFVGVESYCIGNSCL-TQSGFQALVDSGASFTFLPTEIYAEVVVKFDK 360 (385)
Q Consensus 296 ~~~-~~~tp~v~~~~~~~~y~v~l~~isVg~~~~-~~~~~~~iiDSGTs~t~Lp~~~y~~l~~~~~~ 360 (385)
+.+ .+++.|+|+... .+|.|+|++|+|+++.+ ......+||||||++++||+++|++|.+++..
T Consensus 83 ~~~~~g~l~~~p~~~~-~~~~v~l~~i~v~~~~~~~~~~~~aiiDSGTt~~~lP~~~~~~l~~~~~~ 148 (241)
T 1lya_B 83 SKYYKGSLSYLNVTRK-AYWQVHLDQVEVASGLTLCKEGCEAIVDTGTSLMVGPVDEVRELQKAIGA 148 (241)
T ss_dssp GGGEEEEEEEEECSSB-TTBEEEEEEEEETTSCEESTTCEEEEECTTCSSEEECHHHHHHHHHHHTC
T ss_pred HHHcCCceEEEECccc-cEEEEEEeEEEECCeeEeccCCCEEEEECCCccccCCHHHHHHHHHHhCC
Confidence 986 578889888765 89999999999999874 34567899999999999999999998877643
No 37
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=81.40 E-value=1.5 Score=34.25 Aligned_cols=26 Identities=23% Similarity=0.259 Sum_probs=22.8
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeee
Q 016634 110 HYTWIDIGTPNVSFLVALDAGSNLLWVP 137 (385)
Q Consensus 110 y~~~i~iGTP~q~~~v~~DTGS~~~Wv~ 137 (385)
-++.|.|| .|.+.+++|||.|++-+.
T Consensus 9 P~v~v~I~--Gq~~e~LLDTGAD~TVl~ 34 (104)
T 1fmb_A 9 PTTIVLIN--DTPLNVLLDTGADTSVLT 34 (104)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEEE
T ss_pred CEEEEEEC--CEEEEEEeccCCCcEEEc
Confidence 35678999 899999999999999987
No 38
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=80.75 E-value=1.7 Score=33.68 Aligned_cols=26 Identities=23% Similarity=0.167 Sum_probs=22.6
Q ss_pred EEEEEecCCCeEEEEEEEcCCCceeeec
Q 016634 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 111 ~~~i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
++.|.|| .|.+.+++|||.|++-+.-
T Consensus 10 ~vtvkI~--Gq~~eaLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIG--GQLKEALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSEEESC
T ss_pred EEEEEEC--CEEEEEEeccCCCcEEEec
Confidence 4568898 8999999999999998864
No 39
>3ec0_A Protease; HIV-2, inhibitor, hydrolase; HET: GRL; 1.18A {Human immunodeficiency virus type 2} SCOP: b.50.1.1 PDB: 1hii_A* 1hsi_A 1hsh_A* 1idb_A* 1jld_A* 2mip_A 1ida_A* 3ebz_A* 3ecg_A* 3s45_A* 4upj_A* 1ivq_A* 1ivp_A 2hpf_A 3upj_A* 2hpe_A* 5upj_A* 6upj_A* 1sip_A 1tcw_A* ...
Probab=75.74 E-value=2.8 Score=32.47 Aligned_cols=26 Identities=23% Similarity=0.090 Sum_probs=22.5
Q ss_pred EEEEEecCCCeEEEEEEEcCCCceeeec
Q 016634 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 111 ~~~i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
+..|.|| +|.+.+++|||.|++-+.-
T Consensus 10 ~vti~I~--Gq~~e~LLDTGAD~TVl~~ 35 (99)
T 3ec0_A 10 VVTAYIE--GQPVEVLLDTGADDSIVAG 35 (99)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEESS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEcC
Confidence 4568898 8999999999999998854
No 40
>3liy_A Protease; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.86A {Human t-lymphotropic virus 1} PDB: 2b7f_A* 3liq_A* 3lit_A* 3liv_A* 3lix_A* 3lin_A*
Probab=74.31 E-value=3.1 Score=33.02 Aligned_cols=27 Identities=15% Similarity=0.289 Sum_probs=22.8
Q ss_pred EEEEec---CCCeEEEEEEEcCCCceeeec
Q 016634 112 TWIDIG---TPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 112 ~~i~iG---TP~q~~~v~~DTGS~~~Wv~c 138 (385)
..|.|| +|+|.+..++|||.|++-+.-
T Consensus 13 vtikI~~~~~~Gq~~eaLLDTGADdTVl~~ 42 (116)
T 3liy_A 13 IKAQVDTQTSHPKTIEALLDTGADMTVIPI 42 (116)
T ss_dssp EEEEEECSSSCCEEEEEEECTTBSSCEEEG
T ss_pred EEEEEccccCCCeEeEEEeccCCCccEEec
Confidence 345565 789999999999999999976
No 41
>2hah_A Protease, retropepsin; retroviral, aspartyl, hydrolase-hydrolase complex; HET: 3TL; 1.70A {Feline immunodeficiency virus} PDB: 3ogp_A* 3ogq_A* 2fiv_A* 6fiv_A* 3fiv_A* 5fiv_A* 4fiv_A* 1fiv_A* 1b11_A*
Probab=71.25 E-value=3.9 Score=32.62 Aligned_cols=23 Identities=17% Similarity=0.252 Sum_probs=21.0
Q ss_pred EEecCCCeEEEEEEEcCCCceeeec
Q 016634 114 IDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 114 i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
|.|| .|.+.+++|||.|++-+.-
T Consensus 18 ikI~--Gq~~eaLLDTGAD~TVi~~ 40 (116)
T 2hah_A 18 IFVN--GYPIKFLLDTGADITVLNR 40 (116)
T ss_dssp EEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEC--CEEEEEEecCCCCcEEEcc
Confidence 8999 8999999999999998865
No 42
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=70.92 E-value=4.4 Score=33.19 Aligned_cols=35 Identities=26% Similarity=0.401 Sum_probs=26.6
Q ss_pred ccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHHHHHHH
Q 016634 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEV 354 (385)
Q Consensus 312 ~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l 354 (385)
..+.|. +.|+|+.+ .++||||.+.+.++.+..+++
T Consensus 25 ~~~~v~---v~InG~~~-----~~LvDTGAs~s~is~~~a~~l 59 (148)
T 2i1a_A 25 PMLYIN---IEINNYPV-----KAFVDTGAQTTIMSTRLAKKT 59 (148)
T ss_dssp CCCEEE---EEETTEEE-----EEEECTTCSSCEEEHHHHHHH
T ss_pred ceEEEE---EEECCEEE-----EEEEECCCCccccCHHHHHHc
Confidence 345454 67888865 499999999999998876554
No 43
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=68.28 E-value=4.5 Score=33.58 Aligned_cols=34 Identities=24% Similarity=0.380 Sum_probs=26.6
Q ss_pred cEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHHHHHHH
Q 016634 313 AYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEIYAEV 354 (385)
Q Consensus 313 ~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~y~~l 354 (385)
.++|+ +.|+|+.+. ++||||.+.+.++.+..+++
T Consensus 24 ~l~v~---~~Ing~~v~-----~LVDTGAs~s~Is~~~A~rl 57 (148)
T 3s8i_A 24 MLYIN---CKVNGHPLK-----AFVDSGAQMTIMSQACAERC 57 (148)
T ss_dssp CCEEE---EEETTEEEE-----EEECTTCSSCEEEHHHHHHT
T ss_pred EEEEE---EEECCEEEE-----EEEeCCCCcEeeCHHHHHHc
Confidence 45555 447888664 99999999999999987665
No 44
>2i1a_A DNA damage-inducible protein DDI1; acid protease fold, dimer, retroviral protease domain, protein turnover; HET: DNA; 2.30A {Saccharomyces cerevisiae}
Probab=67.90 E-value=4.4 Score=33.17 Aligned_cols=30 Identities=20% Similarity=0.235 Sum_probs=25.8
Q ss_pred ccEEEEEEEecCCCeEEEEEEEcCCCceeeec
Q 016634 107 YWLHYTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 107 ~~~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
...+|+++.|+ ++++.+++|||++.+-+.-
T Consensus 24 ~~~~~v~v~In--G~~~~~LvDTGAs~s~is~ 53 (148)
T 2i1a_A 24 VPMLYINIEIN--NYPVKAFVDTGAQTTIMST 53 (148)
T ss_dssp CCCCEEEEEET--TEEEEEEECTTCSSCEEEH
T ss_pred cceEEEEEEEC--CEEEEEEEECCCCccccCH
Confidence 34688899998 7899999999999988865
No 45
>3sqf_A Protease; folded monomer, retropepsin, D-type retrovirus; 1.63A {Mason-pfizer monkey virus} SCOP: b.50.1.1 PDB: 1nso_A
Probab=62.36 E-value=8.3 Score=30.56 Aligned_cols=25 Identities=8% Similarity=0.152 Sum_probs=21.9
Q ss_pred EEEEecCCCeEEEEEEEcCCCceeeec
Q 016634 112 TWIDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 112 ~~i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
..|.|| +|.+.+++|||.|++-+.-
T Consensus 12 vti~I~--Gq~~eaLLDTGADdTVi~~ 36 (114)
T 3sqf_A 12 LTLWLD--DKMFTGLINTGADVTIIKL 36 (114)
T ss_dssp EEEEET--TEEEEEEECTTCSSCEEEG
T ss_pred EEEEEC--CEEEEEEEccCCCceEEec
Confidence 457888 8999999999999999875
No 46
>3s8i_A Protein DDI1 homolog 1; protease, structural genomics, structural genomics consortiu retropepsin-like domain, protein turnover, hydrolase; 1.70A {Homo sapiens}
Probab=59.42 E-value=7.9 Score=32.02 Aligned_cols=29 Identities=10% Similarity=0.220 Sum_probs=25.5
Q ss_pred EEEEEEEecCCCeEEEEEEEcCCCceeeecC
Q 016634 109 LHYTWIDIGTPNVSFLVALDAGSNLLWVPCQ 139 (385)
Q Consensus 109 ~y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c~ 139 (385)
.+|+++.|. .+++.+++|||++.+-+.-.
T Consensus 24 ~l~v~~~In--g~~v~~LVDTGAs~s~Is~~ 52 (148)
T 3s8i_A 24 MLYINCKVN--GHPLKAFVDSGAQMTIMSQA 52 (148)
T ss_dssp CCEEEEEET--TEEEEEEECTTCSSCEEEHH
T ss_pred EEEEEEEEC--CEEEEEEEeCCCCcEeeCHH
Confidence 578888997 79999999999999998764
No 47
>1lya_A Cathepsin D; lysosomal aspartic protease; HET: NAG BMA MAN; 2.50A {Homo sapiens} SCOP: b.50.1.2 PDB: 1lyb_A* 1lyw_A*
Probab=55.49 E-value=16 Score=27.69 Aligned_cols=32 Identities=25% Similarity=0.467 Sum_probs=23.2
Q ss_pred ccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 312 ~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 13 ~~Y~~~---i~iGTP~---Q~~~v~~DTGSs~lWv~~~ 44 (97)
T 1lya_A 13 AQYYGE---IGIGTPP---QCFTVVFDTGSSNLWVPSI 44 (97)
T ss_dssp TEEEEE---EEETTTT---EEEEEEEETTCCCEEEEBT
T ss_pred CeEEEE---EEECCCC---eEEEEEEeCCCCceEEeEc
Confidence 467664 7788421 2356999999999999864
No 48
>1bxo_A Protein (penicillopepsin); hydrolase, phosphonate inhibitors, macrocycle; HET: MAN PP7; 0.95A {Penicillium janthinellum} SCOP: b.50.1.2 PDB: 1apu_E* 1apv_E* 1apw_E* 1apt_E* 1bxq_A* 1ppk_E* 1ppl_E* 1ppm_E* 2wea_A* 2web_A* 2wec_A* 2wed_A* 3app_A
Probab=51.87 E-value=16 Score=33.78 Aligned_cols=42 Identities=14% Similarity=0.259 Sum_probs=29.3
Q ss_pred eeeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHHH
Q 016634 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEI 350 (385)
Q Consensus 300 ~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~ 350 (385)
++++..+.... ..|.++ |.||.+ .+.++||||++.+++|..-
T Consensus 4 g~v~~~~~~~~-~~Y~~~---i~iG~Q-----~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1bxo_A 4 GVATNTPTAND-EEYITP---VTIGGT-----TLNLNFDTGSADLWVFSTE 45 (323)
T ss_dssp EEEEEEECGGG-SCEEEE---EEETTE-----EEEEEEETTCCCEEECBTT
T ss_pred CceeeeecCCC-CEEEEE---EEECCE-----EEEEEEeCCCcceEEecCC
Confidence 45555555443 667654 778833 4569999999999998753
No 49
>1ibq_A Aspergillopepsin; aspartic proteinase, hydrolase; HET: MAN; 2.14A {Aspergillus phoenicis} SCOP: b.50.1.2
Probab=50.32 E-value=18 Score=33.51 Aligned_cols=42 Identities=17% Similarity=0.288 Sum_probs=29.7
Q ss_pred eeeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHHH
Q 016634 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEI 350 (385)
Q Consensus 300 ~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~ 350 (385)
++.+..+.... ..|.++ |.||.+ .+.++||||++.+++|..-
T Consensus 3 ~~v~~~~~~~~-~~Y~~~---i~iG~Q-----~~~v~~DTGSs~lWv~~~~ 44 (325)
T 1ibq_A 3 GSAVTTPQNND-EEYLTP---VTVGKS-----TLHLDFDTGSADLWVFSDE 44 (325)
T ss_dssp EEEEEEECTTT-SCEEEE---EEEBTE-----EEEEEEETTCCCEEEECTT
T ss_pred ceEEeEEcCCC-CEEEEE---EEECCE-----EEEEEEeCCCccceEeeCC
Confidence 45566665544 677655 778833 4569999999999998653
No 50
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=48.13 E-value=17 Score=29.48 Aligned_cols=27 Identities=11% Similarity=0.143 Sum_probs=22.3
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeeec
Q 016634 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 110 y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
-++.+.|+ +|.+.+++|||.+.+-+.-
T Consensus 23 P~v~i~I~--G~~~~~LlDTGAd~tVl~~ 49 (132)
T 3slz_A 23 PRITLKVG--GQPVTFLVDTGAQHSVLTQ 49 (132)
T ss_dssp SEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CEEEEEEC--CEEEEEEEeCCCCeEEEcc
Confidence 34557888 7999999999999998854
No 51
>1izd_A Aspartic proteinase; sugar binding, acid protease, hydrolase; HET: MAN; 1.90A {Aspergillus oryzae} SCOP: b.50.1.2 PDB: 1ize_A*
Probab=47.52 E-value=21 Score=33.01 Aligned_cols=42 Identities=14% Similarity=0.264 Sum_probs=28.7
Q ss_pred eeeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHHH
Q 016634 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEI 350 (385)
Q Consensus 300 ~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~ 350 (385)
++.+..+.... ..|.++ |.||.+ .+.++||||++.+++|..-
T Consensus 4 ~~v~~~~~~~~-~~Y~~~---i~iG~q-----~~~v~~DTGSs~lWv~~~~ 45 (323)
T 1izd_A 4 GSVTTNPTSND-EEYITQ---VTVGDD-----TLGLDFDTGSADLWVFSSQ 45 (323)
T ss_dssp EEEEEEECGGG-CCEEEE---EEETTE-----EEEEEEETTCCCEEECBTT
T ss_pred CceeeeEcCCC-CEEEEE---EEECCE-----EEEEEEcCCCcceEEecCC
Confidence 44455454433 567654 778833 4569999999999999754
No 52
>2rsp_A RSV protease; hydrolase(aspartyl proteinase); 2.00A {Rous sarcoma virus} SCOP: b.50.1.1 PDB: 1mvp_A 1bai_A*
Probab=45.34 E-value=18 Score=29.09 Aligned_cols=19 Identities=21% Similarity=0.368 Sum_probs=17.0
Q ss_pred CeEEEEEEEcCCCceeeec
Q 016634 120 NVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 120 ~q~~~v~~DTGS~~~Wv~c 138 (385)
+|.+.+++|||-|++-+.-
T Consensus 29 gq~~eaLLDTGAD~TVl~~ 47 (124)
T 2rsp_A 29 SVYITALLDSGADITIISE 47 (124)
T ss_dssp EEEEEEEECTTCSSCEEET
T ss_pred CEEEEEEecCCCCcEEEec
Confidence 6788999999999999875
No 53
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=42.32 E-value=22 Score=31.06 Aligned_cols=26 Identities=23% Similarity=0.147 Sum_probs=22.1
Q ss_pred EEEEEecCCCeEEEEEEEcCCCceeeec
Q 016634 111 YTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 111 ~~~i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
.+.|.|| +|.+.+++|||.|++-+.-
T Consensus 10 ~vtv~I~--Gq~~e~LLDTGAD~TVl~~ 35 (203)
T 3ka2_A 10 LVTIRIG--GQLKEALLDTGADDTVIEE 35 (203)
T ss_dssp EEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred eEEEEEC--CEEEEEEEecCCCceEEec
Confidence 4567899 8999999999999998853
No 54
>3c9x_A Trichoderma reesei aspartic protease; aspartic proteinase, aspartyl protease, hydrolase; 1.70A {Trichoderma reesei} PDB: 3c9y_A* 3emy_A*
Probab=39.79 E-value=36 Score=31.48 Aligned_cols=44 Identities=18% Similarity=0.166 Sum_probs=28.7
Q ss_pred eeeeee-ecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHHH
Q 016634 300 QSTSFL-PIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTEI 350 (385)
Q Consensus 300 ~~tp~v-~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~ 350 (385)
++.+.. +.... ..|.+ .|.||.-. ..+.++||||++.+++|..-
T Consensus 3 ~~v~~~~~~~~~-~~Y~~---~i~iGTP~---Q~~~v~~DTGSs~lWv~~~~ 47 (329)
T 3c9x_A 3 GSAPNHPSDSAD-SEYIT---SVSIGTPA---QVLPLDFDTGSSDLWVFSSE 47 (329)
T ss_dssp EEEEEEESSTTC-CCEEE---EEEETTTT---EEEEEEEETTCCCEEECBTT
T ss_pred cceeeecCCCCC-CEEEE---EEEECCCC---eEEEEEEcCCCCCeEEecCC
Confidence 345555 43333 56765 47788421 23469999999999998753
No 55
>1oew_A Endothiapepsin; hydrolase, aspartic proteinase mechanism, atomic resolution, succinimide, anisotropic refinement; HET: SUI; 0.9A {Cryphonectria parasitica} SCOP: b.50.1.2 PDB: 1gkt_A* 1gvt_A* 1gvv_A* 1gvw_A* 1gvx_A* 1gvu_A* 1oex_A* 2jji_A* 2jjj_A* 2vs2_A* 3uri_A* 3urj_A* 3url_A* 3pww_A* 1e80_E* 1e81_E* 1e82_E* 1e5o_E* 1eed_P* 1epl_E* ...
Probab=37.73 E-value=41 Score=31.11 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=27.9
Q ss_pred eeeeee-ecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 300 QSTSFL-PIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 300 ~~tp~v-~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
++.+.. +.... ..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 3 ~~v~~~~~~~~~-~~Y~~~---i~iGTP~---Q~~~v~~DTGSs~lWv~~~ 46 (329)
T 1oew_A 3 GSATTTPIDSLD-DAYITP---VQIGTPA---QTLNLDFDTGSSDLWVFSS 46 (329)
T ss_dssp EEEEEEESSTTC-CCEEEE---EEETTTT---EEEEEEEETTCCCEEECBT
T ss_pred ceeEeeecCCCC-CEEEEE---EEECCCC---eEEEEEECCCCCCeEEecC
Confidence 344454 43333 567654 7788421 2346999999999999865
No 56
>2apr_A Rhizopuspepsin; hydrolase (aspartic proteinase); 1.80A {Rhizopus microsporus var} SCOP: b.50.1.2 PDB: 3apr_E* 4apr_E* 5apr_E* 6apr_E* 1uh9_A 1uh8_A 1uh7_A
Probab=37.09 E-value=34 Score=31.61 Aligned_cols=42 Identities=19% Similarity=0.331 Sum_probs=27.4
Q ss_pred eeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 301 STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 301 ~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
+.+..+.... ..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 5 ~v~~~~~~~~-~~Y~~~---i~iGTP~---q~~~v~~DTGSs~lWv~~~ 46 (325)
T 2apr_A 5 TVPMTDYGND-IEYYGQ---VTIGTPG---KKFNLDFDTGSSDLWIAST 46 (325)
T ss_dssp EEEEEEETTT-TEEEEE---EEETTTT---EEEEEEEETTCCCCEEEBT
T ss_pred ceeeeecCCC-CEEEEE---EEECCCC---eEEEEEEcCCCCCEEEccC
Confidence 4444444443 667664 7788321 2346999999999999864
No 57
>3slz_A GAG-Pro-POL polyprotein; beta sheet and dimer, protease, peptide inhibitor, TL-3 PEPS virus, hydrolase-hydrolase inhibitor complex; HET: 3TL; 1.40A {Dg-75 murine leukemia virus} PDB: 3nr6_A* 3sm1_A* 3sm2_A* 4exh_A*
Probab=27.36 E-value=49 Score=26.72 Aligned_cols=26 Identities=31% Similarity=0.443 Sum_probs=21.4
Q ss_pred eEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 319 ESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 319 ~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..+.|+|+.+. +++|||...|.|.+.
T Consensus 25 v~i~I~G~~~~-----~LlDTGAd~tVl~~~ 50 (132)
T 3slz_A 25 ITLKVGGQPVT-----FLVDTGAQHSVLTQN 50 (132)
T ss_dssp EEEEETTEEEE-----EEECTTCSSCEECSC
T ss_pred EEEEECCEEEE-----EEEeCCCCeEEEccc
Confidence 34888888765 899999999999864
No 58
>1wkr_A Polyporopepsin; hydrolase, hydrolase-hydrolase inhibitor complex; HET: STA; 1.30A {Irpex lacteus} SCOP: b.50.1.2
Probab=26.44 E-value=84 Score=28.96 Aligned_cols=40 Identities=28% Similarity=0.368 Sum_probs=26.9
Q ss_pred eeeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCH
Q 016634 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPT 348 (385)
Q Consensus 300 ~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~ 348 (385)
+..|+.+. . ..|.++ |.||.-. ..+.++||||++.++++.
T Consensus 3 ~~~~l~n~--~-~~Y~~~---i~iGTP~---q~~~v~~DTGSs~lWv~~ 42 (340)
T 1wkr_A 3 GSVPATNQ--L-VDYVVN---VGVGSPA---TTYSLLVDTGSSNTWLGA 42 (340)
T ss_dssp EEEEEEEC--S-SCEEEE---EEETTTT---EEEEEEEETTCCCCEECS
T ss_pred ccEeeecc--C-cEEEEE---EEECCCC---cEEEEEEeCCChhheecC
Confidence 35566553 2 467664 7788421 235699999999999985
No 59
>3aup_A SBG7S, BG, basic 7S globulin; pepsin-like fold, plant protein; 1.91A {Glycine max}
Probab=26.35 E-value=69 Score=30.50 Aligned_cols=42 Identities=12% Similarity=0.075 Sum_probs=27.4
Q ss_pred eeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 301 STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 301 ~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|+...... ..|.++ |.||.-. ..+.++||||++.+++|-.
T Consensus 11 ~~pl~~~~~~-~~Y~~~---i~iGTP~---Q~~~v~~DTGSs~lWv~~~ 52 (403)
T 3aup_A 11 VLPVQNDGST-GLHWAN---LQKRTPL---MQVPVLVDLNGNHLWVNCE 52 (403)
T ss_dssp EEEEEECTTT-CCEEEE---EEETTTT---EEEEEEEETTCSSEEEECS
T ss_pred EEeeecCCCC-ceEEEE---EECCCCC---ceeEEEEECCCCceeECCC
Confidence 4565532222 567664 6788431 2456999999999999854
No 60
>1b5f_A Protein (cardosin A); hydrolase, aspartic proteinase; HET: NAG FUC BMA MAN; 1.72A {Cynara cardunculus} SCOP: b.50.1.2
Probab=26.21 E-value=74 Score=27.82 Aligned_cols=40 Identities=23% Similarity=0.459 Sum_probs=26.1
Q ss_pred eeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 302 TSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 302 tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
.|+..... ..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 5 ~~l~n~~~--~~Y~~~---i~iGtP~---q~~~v~~DTGSs~lWv~~~ 44 (239)
T 1b5f_A 5 VALTNDRD--TSYFGE---IGIGTPP---QKFTVIFDTGSSVLWVPSS 44 (239)
T ss_dssp EEEEEETT--TEEEEE---EEETTTT---EEEEEEEETTCCCEEEEBT
T ss_pred eeeeecCC--CEEEEE---EEECCCC---eEEEEEEeCCCcceEEEcC
Confidence 45544322 467664 7788421 2356999999999999854
No 61
>3ka2_A [L-Ala51;Gly51']HIV-1 protease; beta-barrel, hydrolase-hydrolase inhibitor complex; HET: YCM 2NC; 1.40A {Synthetic} PDB: 3fsm_A* 3gi0_A* 2o40_A* 3hzc_A* 3hlo_A* 3iaw_A* 3nxe_A* 3nxn_A* 4epj_A 4ep2_A 4ep3_A 4eq0_A 4eqj_A 1hvc_A* 1g6l_A 2whh_A* 1lv1_A* 3dox_A 3kt5_A 3kt2_A ...
Probab=25.89 E-value=60 Score=28.27 Aligned_cols=27 Identities=22% Similarity=0.128 Sum_probs=22.6
Q ss_pred EEEEEEecCCCeEEEEEEEcCCCceeeec
Q 016634 110 HYTWIDIGTPNVSFLVALDAGSNLLWVPC 138 (385)
Q Consensus 110 y~~~i~iGTP~q~~~v~~DTGS~~~Wv~c 138 (385)
=.+.+.|| +|.+.+++|||.|++-+.-
T Consensus 113 P~~~iki~--Gq~~e~LlDTGAD~TVl~~ 139 (203)
T 3ka2_A 113 PLVTIRIG--GQLKEALLDTGADDTVIEE 139 (203)
T ss_dssp CEEEEEET--TEEEEEEECTTCSSCEECS
T ss_pred CcEEEEEC--CEEEeeeecccCCceeeec
Confidence 34668888 7999999999999998853
No 62
>3fv3_A SAPP1P-secreted aspartic protease 1; secreted aspartic protease, virulence factor, H; HET: STA; 1.85A {Candida parapsilosis} SCOP: b.50.1.0 PDB: 3tne_A*
Probab=24.70 E-value=45 Score=30.80 Aligned_cols=32 Identities=16% Similarity=0.286 Sum_probs=22.9
Q ss_pred ccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 312 ~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP~---Q~~~v~~DTGSs~~Wv~~~ 43 (339)
T 3fv3_A 12 PSYASK---VSVGSNK---QQQTVIIDTGSSDFWVVDS 43 (339)
T ss_dssp SSEEEE---EEETTTT---EEEEEEEETTCCCEEEEEE
T ss_pred CEEEEE---EEEcCCC---cEEEEEEeCCCCceEEecC
Confidence 567665 6788421 2346999999999999843
No 63
>1fmb_A EIAV protease; hydrolase (acid proteinase), RNA-directed DNA polymerase, AS protease, endonuclease, polyprotein; HET: HYB; 1.80A {Equine infectious anemia virus} SCOP: b.50.1.1 PDB: 2fmb_A*
Probab=23.38 E-value=73 Score=24.49 Aligned_cols=29 Identities=31% Similarity=0.442 Sum_probs=23.6
Q ss_pred EeEEEEcCeEeecCCceEEEcCcccccccCHHHH
Q 016634 318 VESYCIGNSCLTQSGFQALVDSGASFTFLPTEIY 351 (385)
Q Consensus 318 l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~~y 351 (385)
+..|.|+|+.+ .+++|||.--|.+.....
T Consensus 10 ~v~v~I~Gq~~-----e~LLDTGAD~TVl~~~~w 38 (104)
T 1fmb_A 10 TTIVLINDTPL-----NVLLDTGADTSVLTTAHY 38 (104)
T ss_dssp EEEEEETTEEE-----EEEECTTCSSCEEEHHHH
T ss_pred EEEEEECCEEE-----EEEeccCCCcEEEccccC
Confidence 44588999865 499999999999997655
No 64
>1j71_A Candidapepsin, aspartic proteinase; candida tropicalis aspartic protease, SAPT1, hydrolase; 1.80A {Candida tropicalis} SCOP: b.50.1.2
Probab=22.58 E-value=52 Score=30.36 Aligned_cols=32 Identities=19% Similarity=0.365 Sum_probs=22.9
Q ss_pred ccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 312 ~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|.++ |.||.- ...+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP---~q~~~v~~DTGSs~~Wv~~~ 43 (334)
T 1j71_A 12 PSYAAD---IVVGSN---QQKQTVVIDTGSSDLWVVDT 43 (334)
T ss_dssp SSEEEE---EEETTT---TEEEEEEEETTCCCEEEEEE
T ss_pred cEEEEE---EEEcCC---CcEEEEEEcCCCCCEEEecC
Confidence 567665 778842 12356999999999999843
No 65
>1dpj_A Proteinase A; proteinase A, hydrolase-hydrolase inhibitor COM; HET: BMA MAN NAG; 1.80A {Saccharomyces cerevisiae} SCOP: b.50.1.2 PDB: 1dp5_A* 1fmu_A* 1fmx_A* 1fq5_A* 1fq4_A* 1fq6_A* 1fq7_A* 1fq8_A* 2jxr_A* 1g0v_A*
Probab=21.62 E-value=90 Score=28.61 Aligned_cols=41 Identities=17% Similarity=0.455 Sum_probs=26.8
Q ss_pred eeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 301 STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 301 ~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|+.+... ..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 4 ~~~l~~~~~--~~Y~~~---i~iGtP~---q~~~v~~DTGSs~lWv~~~ 44 (329)
T 1dpj_A 4 DVPLTNYLN--AQYYTD---ITLGTPP---QNFKVILDTGSSNLWVPSN 44 (329)
T ss_dssp EEECEEETT--TEEEEE---EEETTTT---EEEEEEEETTCCCEEEEBT
T ss_pred ceeeeecCC--CEEEEE---EEECCCC---cEEEEEEeCCCcCeEEecC
Confidence 345544332 467654 7788421 2356999999999999864
No 66
>3cms_A Chymosin B; hydrolase, acid proteinase; 2.00A {Bos taurus} SCOP: b.50.1.2 PDB: 4cms_A 1czi_E* 1cms_A
Probab=21.37 E-value=98 Score=28.28 Aligned_cols=41 Identities=24% Similarity=0.395 Sum_probs=27.3
Q ss_pred eeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 301 STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 301 ~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|+..... ..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 5 ~~~l~n~~~--~~Y~~~---i~iGtP~---q~~~v~~DTGSs~~Wv~~~ 45 (323)
T 3cms_A 5 SVPLTNYLD--SQYFGK---IYLGTPP---QEFTVLFDTGSSDFWVPSI 45 (323)
T ss_dssp EEEEEEETT--TEEEEE---EEETTTT---EEEEEEEETTCCCEEEEBT
T ss_pred eeeeEeccC--CEEEEE---EEECCCC---eEEEEEEeCCccceEEcCC
Confidence 455554322 467664 7788521 2356999999999999864
No 67
>3vla_A EDGP; extracellular, inhibitor, plant protein; HET: NAG; 0.95A {Daucus carota} PDB: 3vlb_A
Probab=21.37 E-value=67 Score=30.88 Aligned_cols=42 Identities=12% Similarity=0.069 Sum_probs=28.5
Q ss_pred eeeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCH
Q 016634 300 QSTSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPT 348 (385)
Q Consensus 300 ~~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~ 348 (385)
..+|+...... ..|.++ |+||.-. ..+.++||||++++++|-
T Consensus 9 ~~~pv~~d~~~-~~Y~~~---i~iGTPp---q~~~v~~DTGS~~lWv~c 50 (413)
T 3vla_A 9 LVVPVKKDAST-LQYVTT---INQRTPL---VSENLVVDLGGRFLWVDC 50 (413)
T ss_dssp EEEEEEECTTT-CCEEEE---EEETTTT---EEEEEEEETTCSSEEEEC
T ss_pred EEEEeeecCCC-CeEEEE---EEcCCCC---cceEEEEeCCChhhhccc
Confidence 35565544433 667655 6677532 346799999999999985
No 68
>2qzx_A Candidapepsin-5; aspartic proteinase, aspartyl protease, CL PAIR of basic residues, glycoprotein, protease, secreted; HET: STA; 2.50A {Candida albicans}
Probab=21.20 E-value=58 Score=30.12 Aligned_cols=32 Identities=22% Similarity=0.452 Sum_probs=22.7
Q ss_pred ccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 312 ~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP~---q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 2qzx_A 12 ITYTAD---ITVGSDN---QKLNVIVDTGSSDLWIPDS 43 (342)
T ss_dssp SCEEEE---EEETTTT---EEEEEEEETTCCCEEEEEE
T ss_pred eEEEEE---EEECCCC---cEEEEEEeCCCCCeEEecC
Confidence 567664 7788321 2356999999999999743
No 69
>1mpp_A Pepsin; hydrolase(acid proteinase); 2.00A {Rhizomucor pusillus} SCOP: b.50.1.2 PDB: 2asi_A* 2rmp_A*
Probab=21.19 E-value=99 Score=28.75 Aligned_cols=41 Identities=24% Similarity=0.464 Sum_probs=26.7
Q ss_pred eeeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 301 STSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 301 ~tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|+.... . ..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 9 ~~~l~~~~-~-~~Y~~~---i~iGtP~---q~~~v~~DTGSs~~Wv~~~ 49 (361)
T 1mpp_A 9 TPGLYDFD-L-EEYAIP---VSIGTPG---QDFYLLFDTGSSDTWVPHK 49 (361)
T ss_dssp EEEEEETT-T-TEEEEE---EEETTTT---EEEEEEEETTCCCCEEEBT
T ss_pred eEEeecCC-C-CEEEEE---EEECCCC---cEEEEEEcCCCCCeEECCC
Confidence 45554422 2 567664 7788421 2346999999999999865
No 70
>3pvk_A Candidapepsin-2; hydrolase; 1.27A {Candida albicans} SCOP: b.50.1.2 PDB: 1eag_A 3q70_A* 1zap_A* 2qzw_A 2h6t_A* 2h6s_A*
Probab=21.18 E-value=58 Score=30.01 Aligned_cols=32 Identities=22% Similarity=0.432 Sum_probs=23.0
Q ss_pred ccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 312 ~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|.++ |.||.-. ..+.+++|||++.+++|..
T Consensus 12 ~~Y~~~---i~iGtP~---q~~~v~~DTGSs~~Wv~~~ 43 (342)
T 3pvk_A 12 VTYAAD---ITVGSNN---QKLNVIVDTGSSDLWVPDV 43 (342)
T ss_dssp SSEEEE---EEETTTT---EEEEEEEETTCCCEEEEEE
T ss_pred cEEEEE---EEEcCCC---cEEEEEEECCCcceEEEcC
Confidence 567665 6788421 2356999999999999753
No 71
>1am5_A Pepsin, acid proteinase; aspartyl protease, hydrolase; 2.16A {Gadus morhua} SCOP: b.50.1.2
Probab=21.17 E-value=1.1e+02 Score=27.88 Aligned_cols=40 Identities=18% Similarity=0.355 Sum_probs=26.5
Q ss_pred eeeeecCCCCccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 302 TSFLPIGEKYDAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 302 tp~v~~~~~~~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
.|+.... . ..|.++ |.||.-. ..+.++||||++.+++|..
T Consensus 4 ~~l~n~~-~-~~Y~~~---i~iGtP~---q~~~v~~DTGSs~~Wv~~~ 43 (324)
T 1am5_A 4 EQMKNEA-D-TEYYGV---ISIGTPP---ESFKVIFDTGSSNLWVSSS 43 (324)
T ss_dssp EEEEEET-T-TEEEEE---EEETTTT---EEEEEEEETTCCCEEECBT
T ss_pred eeeecCC-C-CEEEEE---EEECCCC---eEEEEEEeCCCcceEEecC
Confidence 4554432 2 567665 6788521 2356999999999999865
No 72
>2hs1_A HIV-1 protease; ultra-high resolution active site surface binding site, HYDR; HET: 017; 0.84A {Human immunodeficiency virus 1} PDB: 3nu4_A* 3tl9_A* 3tkw_A* 3tkg_A* 3ndu_A* 3ndt_A* 3k4v_A* 3a2o_A* 1fgc_C* 2a1e_A* 2aod_A* 2aoi_A* 2aoj_A* 2hb3_A* 2ien_A* 1sdt_A* 2z4o_A* 2zye_A* 2nmw_A* 3b7v_A* ...
Probab=20.50 E-value=79 Score=24.12 Aligned_cols=26 Identities=31% Similarity=0.392 Sum_probs=21.4
Q ss_pred EeEEEEcCeEeecCCceEEEcCcccccccCH
Q 016634 318 VESYCIGNSCLTQSGFQALVDSGASFTFLPT 348 (385)
Q Consensus 318 l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~ 348 (385)
+..+.|+|+.+. +++|||.--|.+.+
T Consensus 10 ~vtvkI~Gq~~e-----aLLDTGAD~TVl~~ 35 (99)
T 2hs1_A 10 LVTIKIGGQLKE-----ALLDTGADDTIIEE 35 (99)
T ss_dssp EEEEEETTEEEE-----EEECTTCSSEEESC
T ss_pred EEEEEECCEEEE-----EEeccCCCcEEEec
Confidence 455889998765 99999999998874
No 73
>1yg9_A Aspartic protease BLA G 2; allegren, hydrolase, allergen; HET: NAG; 1.30A {Blattella germanica} PDB: 2nr6_A* 3liz_A*
Probab=20.48 E-value=57 Score=30.09 Aligned_cols=30 Identities=23% Similarity=0.279 Sum_probs=22.8
Q ss_pred ccEEEeEeEEEEcCeEeecCCceEEEcCcccccccCHH
Q 016634 312 DAYFVGVESYCIGNSCLTQSGFQALVDSGASFTFLPTE 349 (385)
Q Consensus 312 ~~y~v~l~~isVg~~~~~~~~~~~iiDSGTs~t~Lp~~ 349 (385)
..|.++ |.||.+ .+.++||||++.+++|..
T Consensus 17 ~~Y~~~---i~iG~Q-----~~~v~~DTGSs~lWv~~~ 46 (330)
T 1yg9_A 17 TQYAGI---TKIGNQ-----NFLTVFDSTSCNVVVASQ 46 (330)
T ss_dssp TTSEEE---EEETTE-----EEEEEEETTCCCEEEECT
T ss_pred CEEEEE---EEECCE-----EEEEEEeCCCcceEEecC
Confidence 456554 778833 456999999999999864
Done!