Your job contains 1 sequence.
>016638
MSLLYTPNFKYPEGDLRKNQEFMDSSAHYDQQNDQLSDSSLTRYRSAPSSFLESLVNGNS
GGGNCEDYRCFRPSSPEIDNFLAKYMLPCNGSGDSGSHASQEFGVKAMKQEEPEPITEQN
EYSNGSSQMVYQNLPVHSVGNDISVNVGNAMDNSYGVASSMALENSMQERMATGNGSNLT
RQNSSPAGLFSNLGVDNGFAGMRNGGCFRACNGTNLEASTSASRLINRVNLSPGDPWDDA
SFSGVKRARDSTCNMSFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQG
SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIK
DLQKQVKLLTDNKAKCMCPNKQKLC
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016638
(385 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2026037 - symbol:FBH3 "AT1G51140" species:3702... 403 1.3e-55 2
TAIR|locus:2059979 - symbol:FBH4 "AT2G42280" species:3702... 502 4.7e-48 1
UNIPROTKB|Q8S490 - symbol:rau1 "Transcription factor RAU1... 465 3.9e-44 1
TAIR|locus:505006103 - symbol:AT1G05805 "AT1G05805" speci... 401 2.4e-37 1
TAIR|locus:2008693 - symbol:FBH1 "AT1G35460" species:3702... 317 3.0e-33 2
TAIR|locus:2141573 - symbol:FBH2 "AT4G09180" species:3702... 298 7.7e-31 2
UNIPROTKB|Q7XT55 - symbol:OSJNBa0084K20.3 "OSJNBa0076N16.... 332 4.9e-30 1
TAIR|locus:2126624 - symbol:LRL2 "AT4G30980" species:3702... 181 1.3e-11 1
TAIR|locus:2147760 - symbol:LRL3 "AT5G58010" species:3702... 180 1.4e-11 1
UNIPROTKB|Q6Z7E7 - symbol:P0020C11.18 "Putative bHLH tran... 182 1.4e-11 2
TAIR|locus:2007534 - symbol:AT1G03040 "AT1G03040" species... 178 1.7e-11 2
TAIR|locus:2047555 - symbol:LRL1 "AT2G24260" species:3702... 181 2.1e-11 1
UNIPROTKB|Q7Y1H4 - symbol:OSJNBa0094F01.11 "Putative unch... 178 2.3e-11 1
UNIPROTKB|Q6EPZ6 - symbol:P0014G10.34 "BHLH transcription... 180 6.7e-11 1
UNIPROTKB|Q84QW1 - symbol:OJ1191_A10.109 "BHLH transcript... 160 8.3e-11 2
TAIR|locus:2152551 - symbol:AT5G48560 "AT5G48560" species... 162 8.4e-11 2
TAIR|locus:2139484 - symbol:CIB1 "AT4G34530" species:3702... 175 9.0e-11 1
UNIPROTKB|Q84LH4 - symbol:OSJNBb0011H13.2 "Putative Helix... 173 1.4e-10 1
TAIR|locus:2132303 - symbol:UNE12 "AT4G02590" species:370... 172 1.5e-10 1
TAIR|locus:2028804 - symbol:CIB5 "AT1G26260" species:3702... 173 2.4e-10 1
UNIPROTKB|Q6Z2G7 - symbol:P0680A05.9 "Putative bHLH trans... 172 2.5e-10 1
TAIR|locus:2201906 - symbol:AT1G10120 "AT1G10120" species... 172 2.6e-10 1
TAIR|locus:505006688 - symbol:AT5G50915 "AT5G50915" speci... 166 5.4e-10 1
TAIR|locus:2032990 - symbol:CES "AT1G25330" species:3702 ... 158 5.4e-10 1
UNIPROTKB|Q5VR96 - symbol:P0038C05.31-1 "Os06g0275600 pro... 168 1.1e-09 1
TAIR|locus:2205420 - symbol:AT1G68920 species:3702 "Arabi... 168 1.4e-09 1
UNIPROTKB|Q69Y51 - symbol:P0698A06.26-2 "Putative bHLH tr... 166 1.6e-09 1
UNIPROTKB|Q75M33 - symbol:P0668H12.5 "BHLH transcription ... 164 1.7e-09 1
UNIPROTKB|Q69JJ6 - symbol:OSJNBa0026C08.22 "TA1 protein-l... 165 2.4e-09 1
TAIR|locus:2079676 - symbol:AT3G07340 "AT3G07340" species... 166 5.0e-09 2
UNIPROTKB|Q6ZCV8 - symbol:P0028A08.20 "Os08g0487700 prote... 160 6.1e-09 1
UNIPROTKB|Q5N802 - symbol:P0004D12.24 "BHLH transcription... 158 7.5e-09 2
TAIR|locus:2202867 - symbol:BPEp "AT1G59640" species:3702... 158 8.7e-09 1
UNIPROTKB|Q6K8J6 - symbol:OJ1669_F01.28 "Putative unchara... 137 1.3e-08 1
UNIPROTKB|Q84T08 - symbol:OSJNBa0087C10.10 "BHLH transcri... 153 1.4e-08 1
TAIR|locus:2053766 - symbol:AT2G42300 "AT2G42300" species... 155 1.7e-08 1
TAIR|locus:2095198 - symbol:AT3G23690 "AT3G23690" species... 156 1.8e-08 1
TAIR|locus:2014144 - symbol:BEE1 "BR enhanced expression ... 150 2.9e-08 1
TAIR|locus:2115200 - symbol:BEE2 "AT4G36540" species:3702... 152 3.0e-08 1
TAIR|locus:2172209 - symbol:AT5G62610 "AT5G62610" species... 145 3.4e-08 2
TAIR|locus:2118934 - symbol:RSL2 "AT4G33880" species:3702... 150 3.7e-08 2
TAIR|locus:2027809 - symbol:BEE3 "AT1G73830" species:3702... 149 3.9e-08 1
UNIPROTKB|Q69WS3 - symbol:OJ1118_E12.15 "Putative bHLH pr... 149 4.3e-08 1
UNIPROTKB|Q8GZV6 - symbol:OJ1017C11.10 "Putative uncharac... 163 5.9e-08 2
UNIPROTKB|Q948F6 - symbol:OSJNBa0049O12.18 "Putative SPAT... 149 6.3e-08 1
UNIPROTKB|Q2QMV9 - symbol:LOC_Os12g39850 "Helix-loop-heli... 148 8.7e-08 1
TAIR|locus:2199221 - symbol:RSL4 "AT1G27740" species:3702... 145 1.1e-07 1
TAIR|locus:2155543 - symbol:HEC1 "HECATE 1" species:3702 ... 133 5.7e-07 2
TAIR|locus:504954900 - symbol:AT5G43175 "AT5G43175" speci... 136 6.5e-07 1
TAIR|locus:2115080 - symbol:SPT "AT4G36930" species:3702 ... 142 6.9e-07 1
UNIPROTKB|Q5VRS4 - symbol:OSJNBa0015I14.14 "Basic helix-l... 137 1.7e-06 1
TAIR|locus:2144791 - symbol:HEC3 "AT5G09750" species:3702... 132 2.1e-06 1
UNIPROTKB|Q5NAE0 - symbol:P0498A12.33 "Putative BP-5 prot... 140 2.4e-06 1
TAIR|locus:2126876 - symbol:UNE10 "AT4G00050" species:370... 137 2.8e-06 1
UNIPROTKB|Q7FA23 - symbol:OSJNBa0058K23.6 "Os04g0618600 p... 125 3.0e-06 1
TAIR|locus:2155503 - symbol:ALC "AT5G67110" species:3702 ... 128 4.6e-06 1
TAIR|locus:2156015 - symbol:RSL1 "AT5G37800" species:3702... 116 5.1e-06 2
TAIR|locus:2012345 - symbol:PIF3 "AT1G09530" species:3702... 136 5.8e-06 1
TAIR|locus:2183078 - symbol:SRS8 "AT5G33210" species:3702... 121 5.9e-06 1
UNIPROTKB|Q6K8Y4 - symbol:OJ1695_H09.18 "Basic helix-loop... 118 6.1e-06 2
UNIPROTKB|Q6Z9R3 - symbol:P0461F06.33 "BHLH protein famil... 127 1.2e-05 1
TAIR|locus:2061634 - symbol:PIL5 "phytochrome interacting... 132 1.4e-05 1
UNIPROTKB|Q8GRJ1 - symbol:OJ1343_B12.103 "Transcription f... 130 1.9e-05 1
UNIPROTKB|Q9ASJ3 - symbol:P0439B06.24 "Putative uncharact... 127 2.0e-05 2
TAIR|locus:2074865 - symbol:HEC2 "AT3G50330" species:3702... 124 2.1e-05 1
UNIPROTKB|Q6AV35 - symbol:OSJNBa0063J18.7 "Putative trans... 123 2.3e-05 2
TAIR|locus:2089418 - symbol:AT3G21330 "AT3G21330" species... 127 3.3e-05 1
TAIR|locus:2028957 - symbol:RHD6 "AT1G66470" species:3702... 118 3.6e-05 2
TAIR|locus:4010713915 - symbol:AT4G28811 species:3702 "Ar... 131 3.9e-05 2
UNIPROTKB|Q67TR8 - symbol:B1342C04.6 "Basic helix-loop-he... 122 4.0e-05 1
TAIR|locus:2053733 - symbol:PIF4 "AT2G43010" species:3702... 127 4.2e-05 1
UNIPROTKB|Q2R0R9 - symbol:LOC_Os11g41640 "Helix-loop-heli... 121 5.9e-05 1
UNIPROTKB|Q8S0N2 - symbol:P0692C11.41-1 "BHLH transcripti... 122 8.9e-05 2
UNIPROTKB|Q6ZFY4 - symbol:OJ1311_H06.19 "BHLH protein-lik... 121 9.8e-05 1
TAIR|locus:2204569 - symbol:AT1G30670 "AT1G30670" species... 112 0.00013 2
UNIPROTKB|Q69TX2 - symbol:P0021C04.13 "BHLH protein-like"... 116 0.00014 1
TAIR|locus:2077680 - symbol:PIL6 "AT3G59060" species:3702... 120 0.00027 1
TAIR|locus:2117788 - symbol:AT4G28800 species:3702 "Arabi... 120 0.00027 1
TAIR|locus:4010713916 - symbol:AT4G28815 species:3702 "Ar... 116 0.00038 1
TAIR|locus:2163163 - symbol:PIF7 "AT5G61270" species:3702... 116 0.00053 1
TAIR|locus:2062235 - symbol:NAI1 "AT2G22770" species:3702... 115 0.00054 1
UNIPROTKB|Q5MP56 - symbol:BA1 "Uncharacterized protein" s... 110 0.00079 1
TAIR|locus:2117773 - symbol:AT4G28790 species:3702 "Arabi... 115 0.00085 1
>TAIR|locus:2026037 [details] [associations]
symbol:FBH3 "AT1G51140" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0048573 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC079828 EMBL:AY034941 EMBL:AY063120
IPI:IPI00519239 PIR:H96548 RefSeq:NP_564583.1 UniGene:At.19155
ProteinModelPortal:Q9C690 SMR:Q9C690 PaxDb:Q9C690 PRIDE:Q9C690
EnsemblPlants:AT1G51140.1 GeneID:841537 KEGG:ath:AT1G51140
TAIR:At1g51140 eggNOG:NOG312535 HOGENOM:HOG000242890
InParanoid:Q9C690 OMA:TKDEDSA PhylomeDB:Q9C690
ProtClustDB:CLSN2917227 Genevestigator:Q9C690 Uniprot:Q9C690
Length = 379
Score = 403 (146.9 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 79/123 (64%), Positives = 101/123 (82%)
Query: 256 SFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVPCKIRAKRGCATH 315
S GLD Y+T++ +S ++ L HH+SLPK+ ++ +E+ L S+PCKIRAKRGCATH
Sbjct: 259 SGGLDQYKTKDEDSASRRPPLAHHMSLPKSLSD---IEQLL--SDSIPCKIRAKRGCATH 313
Query: 316 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAK 375
PRSIAERVRRT+ISERMRKLQDL PNMD QTNTA+MLDLAV++IKDLQ+QVK L +++A+
Sbjct: 314 PRSIAERVRRTKISERMRKLQDLVPNMDTQTNTADMLDLAVQYIKDLQEQVKALEESRAR 373
Query: 376 CMC 378
C C
Sbjct: 374 CRC 376
Score = 188 (71.2 bits), Expect = 1.3e-55, Sum P(2) = 1.3e-55
Identities = 71/251 (28%), Positives = 113/251 (45%)
Query: 29 YDQQNDQLSDSSLTRYRSAPSSFLESLVNGNSGGGNCEDYRCFRPSSPEIDNFLAKYMLP 88
+D Q+ + +S L RY+SAPSS+ S G + E++ RP+SPE + L+ ++
Sbjct: 13 HDHQHQRPRNSGLIRYQSAPSSYFSSF------GESIEEF-LDRPTSPETERILSGFLQT 65
Query: 89 CNGSGDSGSHASQEFGVKAMKQEEPEPITEQNEYSNGSSQMVYQNLPVHSVGNDISVNVG 148
+ S + S F +++ PE TE + + V S +ISVN
Sbjct: 66 TDTSDNVDSFLHHTFNSDGTEKKPPEVKTEDEDAEIPVTATATAMEVVVSGDGEISVNP- 124
Query: 149 NAMDNSYGVASSMALENSMQERMATGNGSNLTRQNSSPAGLFSNLGVDNGFAG-MRNGGC 207
+ S G +S++ +E+ +NL R NSSPAGLFS++ V+ +A M++ G
Sbjct: 125 ---EVSIGYVASVSRNKRPREKDDRTPVNNLARHNSSPAGLFSSIDVETAYAAVMKSMGG 181
Query: 208 FRACNGTNLEASTSASRLINRVNLSP--GDPWDDASFSGVKRARDSTCNMSFGLDAYETQ 265
F N + ++T AS L R L P S VK S +
Sbjct: 182 FGGSNVMST-SNTEASSLTPRSKLLPPTSRAMSPISEVDVKPGFSSRLPPRTLSGGFNRS 240
Query: 266 NGNSGNQSTRL 276
GN G+ S++L
Sbjct: 241 FGNEGSASSKL 251
>TAIR|locus:2059979 [details] [associations]
symbol:FBH4 "AT2G42280" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048573 "photoperiodism, flowering" evidence=IMP] [GO:0046685
"response to arsenic-containing substance" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC002561 GO:GO:0048573
Gene3D:4.10.280.10 SUPFAM:SSF47459 eggNOG:NOG312535
HOGENOM:HOG000242890 EMBL:BT015339 EMBL:BT015712 EMBL:AK228981
IPI:IPI00530686 IPI:IPI00538142 PIR:T00937 RefSeq:NP_181757.2
RefSeq:NP_973670.1 UniGene:At.12448 UniGene:At.43726
ProteinModelPortal:Q66GR3 SMR:Q66GR3 PRIDE:Q66GR3
EnsemblPlants:AT2G42280.1 GeneID:818829 KEGG:ath:AT2G42280
TAIR:At2g42280 InParanoid:Q66GR3 OMA:NDNRANC PhylomeDB:Q66GR3
ProtClustDB:CLSN2681218 Genevestigator:Q66GR3 Uniprot:Q66GR3
Length = 359
Score = 502 (181.8 bits), Expect = 4.7e-48, P = 4.7e-48
Identities = 147/385 (38%), Positives = 207/385 (53%)
Query: 23 MDSSAHYDQQNDQLSDSSLTRYRSAPSSFLESLVNGNSGGGNCEDYRCFRPSSPEIDNFL 82
MDS+ H N + S L R+RSAPSS L + V+ + G F + D L
Sbjct: 1 MDSNNHLYDPNP--TGSGLLRFRSAPSSVLAAFVDDDKIG--------F-----DSDRLL 45
Query: 83 AKYMLPCNGSGDSGSHASQEFGVKAMKQEE--------PEPITEQNEYSNGSSQMVYQNL 134
++++ +GD GS ++ ++ P P E + + Q+
Sbjct: 46 SRFVTSNGVNGDLGSPKFEDKSPVSLTNTSVSYAATLPPPPQLEPSSFLGLPPHYPRQSK 105
Query: 135 PV-HSVGNDISVNVGNAMDNSYGVASSMALENSMQERMATGNGSNLTRQNSSPAGLFSNL 193
+ +SVG D + + N ++ V S++ ++S M T NL+ QN G NL
Sbjct: 106 GIMNSVGLDQFLGINN--HHTKPVESNLLRQSSSPAGMFT----NLSDQNGY--GSMRNL 157
Query: 194 G--VDNGFAGMRNGGCFRACN-----GTNLEASTSASRLINRVNLSPGDPWDD-ASF--- 242
++ + + G R C+ ++L + + N P W+D +SF
Sbjct: 158 MNYEEDEESPSNSNGLRRHCSLSSRPPSSLGMLSQIPEIAPETNF-PYSHWNDPSSFIDN 216
Query: 243 -SGVKRARDSTCNMSFGLDAYETQNGNSGNQSTRLVHHLSLPK---TSAEMAAVEKFLHF 298
S +KR + + G QNG SGN+ L HHLSLPK T+++M +V+K+L
Sbjct: 217 LSSLKREAEDDGKLFLG-----AQNGESGNRMQLLSHHLSLPKSSSTASDMVSVDKYLQL 271
Query: 299 QGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEH 358
Q SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQ+L PNMDKQTNT++MLDLAV++
Sbjct: 272 QDSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQELVPNMDKQTNTSDMLDLAVDY 331
Query: 359 IKDLQKQVKLLTDNKAKCMCPNKQK 383
IKDLQ+Q K+L DN+A C C NK+K
Sbjct: 332 IKDLQRQYKILNDNRANCKCMNKEK 356
>UNIPROTKB|Q8S490 [details] [associations]
symbol:rau1 "Transcription factor RAU1" species:4530 "Oryza
sativa" [GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF465824
ProteinModelPortal:Q8S490 Gramene:Q8S490 Genevestigator:Q8S490
Uniprot:Q8S490
Length = 150
Score = 465 (168.7 bits), Expect = 3.9e-44, P = 3.9e-44
Identities = 97/145 (66%), Positives = 111/145 (76%)
Query: 239 DASFSGVKRARDSTCNMSFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHF 298
D + SGVKR RDS+ +QNG G L H SLPKTS+EMAA+EKFL F
Sbjct: 14 DTNISGVKRQRDSS---------EPSQNGGGGGG---LAHQFSLPKTSSEMAAIEKFLQF 61
Query: 299 QGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEH 358
Q +VPCKIRAKRGCATHPRSIAERVRRTRISER+RKLQ+L PNMDKQTNTA+MLDLAV++
Sbjct: 62 QDAVPCKIRAKRGCATHPRSIAERVRRTRISERIRKLQELVPNMDKQTNTADMLDLAVDY 121
Query: 359 IKDLQKQVKLLTDNKAKCMCPNKQK 383
IKDLQKQVK L D++A C C K +
Sbjct: 122 IKDLQKQVKGLNDSRANCTCSAKHQ 146
>TAIR|locus:505006103 [details] [associations]
symbol:AT1G05805 "AT1G05805" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC009999 HOGENOM:HOG000242890 EMBL:BT000954 EMBL:AY086106
IPI:IPI00516925 PIR:F86192 RefSeq:NP_563749.1 UniGene:At.11933
ProteinModelPortal:Q8H102 SMR:Q8H102 IntAct:Q8H102 STRING:Q8H102
PaxDb:Q8H102 PRIDE:Q8H102 EnsemblPlants:AT1G05805.1 GeneID:837090
KEGG:ath:AT1G05805 TAIR:At1g05805 eggNOG:NOG249421
InParanoid:Q8H102 OMA:NEVNETP PhylomeDB:Q8H102
ProtClustDB:CLSN2687697 Genevestigator:Q8H102 Uniprot:Q8H102
Length = 362
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 131/372 (35%), Positives = 190/372 (51%)
Query: 25 SSAHYDQQNDQLSDSSLTRYRSAPSSFLESLVNGNSGGG--NCEDYRCFRPSSPEIDNFL 82
S++ Q++ L RY SAP SFL S+V+ GGG N D+ ++PSS DNF+
Sbjct: 7 STSSSSQRSSLPGGGGLIRYGSAPGSFLNSVVDEVIGGGSSNARDFTGYQPSS---DNFI 63
Query: 83 AKYMLPCNGSGDSGSHASQEFGVKAMKQEEPEPITEQNEYSNGSSQMVYQNLPVHSVG-- 140
+ G+ DS S S + + N +N S++ ++ + S G
Sbjct: 64 GNFF---TGAADSSSLRSDSTTCGVNNSSDGQKQLGNNN-NNNSNKDIFLD---RSYGGF 116
Query: 141 NDISV-NVGNAMD--NSYGVASSMALENSMQERMATGNGSNLTRQN-SSPAGLFSNLGVD 196
N+IS + N + NS G + S+A + S T S+ + + P +S G
Sbjct: 117 NEISQQHKSNDIGGGNSSG-SYSLARQRSSPADFFTYLASDKNNFSLNQPTSDYSPQGGS 175
Query: 197 NGFAGMRNGGCFRACNGTNLEASTSASRLINRVNLSPGDPWDDASFSGVK---RARDSTC 253
NG G + + TN + S +R IN VN +P SFS DS
Sbjct: 176 NG--GRGHSRLKSQLSFTNHD---SLAR-INEVNETPVHDGSGHSFSAASFGAATTDSWD 229
Query: 254 NMSFGLDAYETQ-NGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHF-QGSVPCKIRAKRG 311
+ S + T+ + S + + L SLP ++ M ++ F+ + SVPCKIRAKRG
Sbjct: 230 DGSGSIGFTVTRPSKRSKDMDSGLFSQYSLPSDTS-MNYMDNFMQLPEDSVPCKIRAKRG 288
Query: 312 CATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTD 371
CATHPRSIAER RRTRIS +++KLQDL PNMDKQT+ ++MLDLAV+HIK LQ Q++ L
Sbjct: 289 CATHPRSIAERERRTRISGKLKKLQDLVPNMDKQTSYSDMLDLAVQHIKGLQHQLQNLKK 348
Query: 372 NKAKCMCPNKQK 383
++ C C +K
Sbjct: 349 DQENCTCGCSEK 360
>TAIR|locus:2008693 [details] [associations]
symbol:FBH1 "AT1G35460" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AF488612 EMBL:AC023064 EMBL:AF411791 EMBL:AY093794
IPI:IPI00538359 PIR:F86475 RefSeq:NP_174776.1 UniGene:At.18017
ProteinModelPortal:Q9C8P8 SMR:Q9C8P8 PRIDE:Q9C8P8
EnsemblPlants:AT1G35460.1 GeneID:840438 KEGG:ath:AT1G35460
TAIR:At1g35460 eggNOG:NOG263612 HOGENOM:HOG000095218
InParanoid:Q9C8P8 OMA:NLCLTEL PhylomeDB:Q9C8P8
ProtClustDB:CLSN2679906 Genevestigator:Q9C8P8 Uniprot:Q9C8P8
Length = 259
Score = 317 (116.6 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 57/86 (66%), Positives = 75/86 (87%)
Query: 298 FQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVE 357
F+ SVPC++RAKRGCATHPRSIAERVRRTRIS+R+R+LQ+L PNMDKQTNTA+ML+ AVE
Sbjct: 173 FEDSVPCRVRAKRGCATHPRSIAERVRRTRISDRIRRLQELVPNMDKQTNTADMLEEAVE 232
Query: 358 HIKDLQKQVKLLTDNKAKCMCPNKQK 383
++K LQ Q++ LT+ + +C C K++
Sbjct: 233 YVKALQSQIQELTEQQKRCKCKPKEE 258
Score = 61 (26.5 bits), Expect = 3.0e-33, Sum P(2) = 3.0e-33
Identities = 28/107 (26%), Positives = 42/107 (39%)
Query: 91 GSGDSGSHASQEFGVKAMKQEEP---EPITEQNEYSNGSSQMVYQNLPVHSVGNDISVNV 147
G G G S+ G+ ++ E + E++E + L GN+ S V
Sbjct: 13 GGGGGGGEVSRS-GLSRIRSAPATWIETLLEEDEEEGLKPNLCLTEL---LTGNNNSGGV 68
Query: 148 GNAMDNSYGVASSMALENSMQERMATGNGSNLTRQNSSPAGLFSNLG 194
+ D+S+ SS+ E + G RQNSSPA S G
Sbjct: 69 ITSRDDSFEFLSSV--EQGLYNHH---QGGGFHRQNSSPADFLSGSG 110
Score = 55 (24.4 bits), Expect = 1.3e-32, Sum P(2) = 1.3e-32
Identities = 11/29 (37%), Positives = 21/29 (72%)
Query: 35 QLSDSSLTRYRSAPSSFLESLVNGNSGGG 63
++S S L+R RSAP++++E+L+ + G
Sbjct: 20 EVSRSGLSRIRSAPATWIETLLEEDEEEG 48
>TAIR|locus:2141573 [details] [associations]
symbol:FBH2 "AT4G09180" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AL161514 HOGENOM:HOG000095218 ProtClustDB:CLSN2679906
EMBL:AF488613 EMBL:BT010423 EMBL:AK230384 IPI:IPI00545642
PIR:B85093 RefSeq:NP_192657.1 UniGene:At.33710
ProteinModelPortal:Q9M0R0 SMR:Q9M0R0 PaxDb:Q9M0R0 PRIDE:Q9M0R0
EnsemblPlants:AT4G09180.1 GeneID:826499 KEGG:ath:AT4G09180
TAIR:At4g09180 eggNOG:NOG277140 InParanoid:Q9M0R0 OMA:MENLMED
PhylomeDB:Q9M0R0 Genevestigator:Q9M0R0 Uniprot:Q9M0R0
Length = 262
Score = 298 (110.0 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 81/216 (37%), Positives = 119/216 (55%)
Query: 171 MATGNGSNLTRQNSSPAGLFSNLGVDNGFAGMRNGGCFRACNGTNLEASTSASRLINRVN 230
+ TGN ++L S F + V+ G + GG F N T + + + I
Sbjct: 61 LLTGNSNDLPTSRGSFE--FP-IPVEQGL--YQQGG-FHRQNSTPADFLSGSDGFIQSFG 114
Query: 231 LSPGDPWDDASFS---GVKRARDSTCNMSFGLDAYETQNGNSGNQSTRLVHHLSLPKTSA 287
+ + + G KR+R+ F + +Q G QS+ V P +
Sbjct: 115 IQANYDYLSGNIDVSPGSKRSREMEA--LFSSPEFTSQM--KGEQSSGQV-----PTGVS 165
Query: 288 EMAAVEKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTN 347
M+ + + SV ++RAKRGCATHPRSIAERVRRTRIS+R+RKLQ+L PNMDKQTN
Sbjct: 166 SMSDMNMENLMEDSVAFRVRAKRGCATHPRSIAERVRRTRISDRIRKLQELVPNMDKQTN 225
Query: 348 TAEMLDLAVEHIKDLQKQVKLLTDNKAKCMCPNKQK 383
TA+ML+ AVE++K LQ+Q++ LT+ + +C C K++
Sbjct: 226 TADMLEEAVEYVKVLQRQIQELTEEQKRCTCIPKEE 261
Score = 57 (25.1 bits), Expect = 7.7e-31, Sum P(2) = 7.7e-31
Identities = 12/21 (57%), Positives = 18/21 (85%)
Query: 36 LSDSSLTRYRSAPSSFLESLV 56
LS S L+R RSAP+++LE+L+
Sbjct: 24 LSRSGLSRIRSAPATWLEALL 44
>UNIPROTKB|Q7XT55 [details] [associations]
symbol:OSJNBa0084K20.3 "OSJNBa0076N16.1 protein"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000141 EMBL:AL606613 EMBL:AL731617 Uniprot:Q7XT55
Length = 218
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 70/121 (57%), Positives = 87/121 (71%)
Query: 265 QNGNSGNQS--TRLVHHLSLPKTSAEMAAVEKFLHFQ-GSVPCKIRAKRGCATHPRSIAE 321
++G GN L ++ S EMA VEK+L Q VP ++RAKRGCATHPRSIAE
Sbjct: 90 KSGAHGNDDIIATLSNYESQLVAPREMAGVEKYLQMQHDQVPFRVRAKRGCATHPRSIAE 149
Query: 322 RVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAKCMCPNK 381
R RRTRISE++RKLQ L PNMDKQT+T++MLDLAV+HIK LQ Q++ L ++K KC C K
Sbjct: 150 RERRTRISEKLRKLQALVPNMDKQTSTSDMLDLAVDHIKGLQSQLQTLKEDKEKCTCSCK 209
Query: 382 Q 382
Q
Sbjct: 210 Q 210
>TAIR|locus:2126624 [details] [associations]
symbol:LRL2 "AT4G30980" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL022198
EMBL:AL161578 HOGENOM:HOG000239571 GO:GO:0080147
ProtClustDB:CLSN2683027 EMBL:AF488601 IPI:IPI00524968 PIR:G85362
RefSeq:NP_194827.2 UniGene:At.31786 ProteinModelPortal:Q8S3D5
SMR:Q8S3D5 EnsemblPlants:AT4G30980.1 GeneID:829223
KEGG:ath:AT4G30980 TAIR:At4g30980 eggNOG:NOG295725
InParanoid:O65552 OMA:GGSHENT PhylomeDB:Q8S3D5
Genevestigator:Q8S3D5 Uniprot:Q8S3D5
Length = 310
Score = 181 (68.8 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
K+RA+RG AT P SIAER+RR RI+ERM+ LQ+L PN +K T+ A MLD ++++K LQ
Sbjct: 129 KVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNGNK-TDKASMLDEIIDYVKFLQL 187
Query: 365 QVKLLT 370
QVK+L+
Sbjct: 188 QVKVLS 193
>TAIR|locus:2147760 [details] [associations]
symbol:LRL3 "AT5G58010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0080147 "root hair cell development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P36956 HOGENOM:HOG000239571 GO:GO:0080147
EMBL:AB026635 EMBL:AF488614 IPI:IPI00540554 RefSeq:NP_200609.1
UniGene:At.29300 ProteinModelPortal:Q9LSQ3 SMR:Q9LSQ3 PRIDE:Q9LSQ3
EnsemblPlants:AT5G58010.1 GeneID:835913 KEGG:ath:AT5G58010
TAIR:At5g58010 eggNOG:NOG252939 InParanoid:Q9LSQ3 OMA:TEQRVAK
PhylomeDB:Q9LSQ3 ProtClustDB:CLSN2916934 Genevestigator:Q9LSQ3
Uniprot:Q9LSQ3
Length = 297
Score = 180 (68.4 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/66 (56%), Positives = 52/66 (78%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
++RA+RG AT P SIAER+RR RI+ERM+ LQ+L PN +K T+ A MLD +E+++ LQ
Sbjct: 98 RVRARRGQATDPHSIAERLRRERIAERMKSLQELVPNTNK-TDKASMLDEIIEYVRFLQL 156
Query: 365 QVKLLT 370
QVK+L+
Sbjct: 157 QVKVLS 162
>UNIPROTKB|Q6Z7E7 [details] [associations]
symbol:P0020C11.18 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:CM000139
EMBL:AP004865 EMBL:AK241924 EnsemblPlants:LOC_Os02g35660.1
OMA:TTAMQYL Uniprot:Q6Z7E7
Length = 524
Score = 182 (69.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 38/71 (53%), Positives = 54/71 (76%)
Query: 300 GSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHI 359
G+ ++RA+RG AT P SIAER+RR +IS+RM+ LQ+L PN +K TN A MLD ++++
Sbjct: 308 GAPKPRVRARRGQATDPHSIAERLRREKISDRMKDLQELVPNSNK-TNKASMLDEIIDYV 366
Query: 360 KDLQKQVKLLT 370
K LQ QVK+L+
Sbjct: 367 KFLQLQVKVLS 377
Score = 46 (21.3 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 23/104 (22%), Positives = 41/104 (39%)
Query: 95 SGSHASQEFGVKAMKQEE--PEPITEQNEYSNGSSQM-VYQNLPVHSVGNDISVNVGNAM 151
+G Q FG ++ + E + + Q+ V + H + +DI N G M
Sbjct: 164 AGEETPQSFGFGSLFNGDLLQEATVSKYHHHQQQQQLGVVPSSQPHHLNDDIDFNTGKLM 223
Query: 152 DNSYG---VASSMALENSMQERMATG-NGSNLTRQNSSPAGLFS 191
+ G V S+ Q+ ++G + NL+ S P F+
Sbjct: 224 SFASGQQHVTPSIDSLQIDQKEFSSGLHHLNLSSLISGPLASFN 267
>TAIR|locus:2007534 [details] [associations]
symbol:AT1G03040 "AT1G03040" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AF251692
EMBL:AC006550 EMBL:AY054469 EMBL:AY114633 IPI:IPI00529284
PIR:B86161 RefSeq:NP_001184895.1 RefSeq:NP_563672.1
UniGene:At.20497 ProteinModelPortal:Q93Y00 SMR:Q93Y00 IntAct:Q93Y00
PaxDb:Q93Y00 PRIDE:Q93Y00 EnsemblPlants:AT1G03040.1 GeneID:839446
KEGG:ath:AT1G03040 TAIR:At1g03040 eggNOG:NOG281566
HOGENOM:HOG000239571 InParanoid:Q93Y00 OMA:SIVKPEM PhylomeDB:Q93Y00
ProtClustDB:CLSN2687635 Genevestigator:Q93Y00 Uniprot:Q93Y00
Length = 302
Score = 178 (67.7 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 37/74 (50%), Positives = 56/74 (75%)
Query: 297 HFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAV 356
H Q ++ ++RA+RG AT P SIAER+RR RI+ER+R LQ+L P ++K T+ A M+D V
Sbjct: 135 HQQSTIRPRVRARRGQATDPHSIAERLRRERIAERIRSLQELVPTVNK-TDRAAMIDEIV 193
Query: 357 EHIKDLQKQVKLLT 370
+++K L+ QVK+L+
Sbjct: 194 DYVKFLRLQVKVLS 207
Score = 37 (18.1 bits), Expect = 1.7e-11, Sum P(2) = 1.7e-11
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 75 SPEIDNFLAKYMLPCNGSGDSGSHASQEFGV 105
SP D+F + + N SG SGS S GV
Sbjct: 16 SPT-DDFFEQILGLSNFSGSSGSGLSGIGGV 45
>TAIR|locus:2047555 [details] [associations]
symbol:LRL1 "AT2G24260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0080147
"root hair cell development" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC005967
HOGENOM:HOG000239571 GO:GO:0080147 EMBL:AF488599 EMBL:AK176370
EMBL:AK176390 EMBL:BT026512 IPI:IPI00528969 PIR:E84634
RefSeq:NP_180003.1 UniGene:At.20792 ProteinModelPortal:Q9ZUG9
SMR:Q9ZUG9 EnsemblPlants:AT2G24260.1 GeneID:816961
KEGG:ath:AT2G24260 TAIR:At2g24260 eggNOG:NOG284260
InParanoid:Q9ZUG9 OMA:STATCHS PhylomeDB:Q9ZUG9
ProtClustDB:CLSN2683027 Genevestigator:Q9ZUG9 Uniprot:Q9ZUG9
Length = 350
Score = 181 (68.8 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 39/66 (59%), Positives = 52/66 (78%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
KIRA+RG AT P SIAER+RR RI+ERM+ LQ+L PN +K T+ A MLD ++++K LQ
Sbjct: 137 KIRARRGQATDPHSIAERLRRERIAERMKALQELVPNGNK-TDKASMLDEIIDYVKFLQL 195
Query: 365 QVKLLT 370
QVK+L+
Sbjct: 196 QVKVLS 201
>UNIPROTKB|Q7Y1H4 [details] [associations]
symbol:OSJNBa0094F01.11 "Putative uncharacterized protein
OSJNBa0094F01.11" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0009567
EMBL:AC093713 EMBL:AK104412 RefSeq:NP_001051563.1 UniGene:Os.27522
EnsemblPlants:LOC_Os03g58330.1 GeneID:4334429 KEGG:osa:4334429
OMA:TDGTERQ ProtClustDB:CLSN2694399 Uniprot:Q7Y1H4
Length = 294
Score = 178 (67.7 bits), Expect = 2.3e-11, P = 2.3e-11
Identities = 38/66 (57%), Positives = 52/66 (78%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
K+RA+RG AT P SIAER+RR RI+ERMR LQ+L PN +K T+ A MLD ++++K L+
Sbjct: 132 KVRARRGQATDPHSIAERLRRERIAERMRALQELVPNTNK-TDRAAMLDEILDYVKFLRL 190
Query: 365 QVKLLT 370
QVK+L+
Sbjct: 191 QVKVLS 196
>UNIPROTKB|Q6EPZ6 [details] [associations]
symbol:P0014G10.34 "BHLH transcription factor PTF1-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 HOGENOM:HOG000239571 EMBL:AP005784
RefSeq:NP_001175840.1 UniGene:Os.59658
EnsemblPlants:LOC_Os09g25040.1 GeneID:9272478 KEGG:osa:9272478
OMA:SMSVLTA Uniprot:Q6EPZ6
Length = 499
Score = 180 (68.4 bits), Expect = 6.7e-11, P = 6.7e-11
Identities = 39/71 (54%), Positives = 52/71 (73%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDK--QTNTAEMLDLAVEHIKDL 362
++RA+RG AT P SIAER+RR RI+ERM+ LQ+L PN +K QT+ A MLD ++++K L
Sbjct: 249 RVRARRGQATDPHSIAERLRRERIAERMKALQELVPNANKLMQTDKASMLDEIIDYVKFL 308
Query: 363 QKQVKLLTDNK 373
Q QVK T K
Sbjct: 309 QLQVKASTYTK 319
>UNIPROTKB|Q84QW1 [details] [associations]
symbol:OJ1191_A10.109 "BHLH transcription
factor(GBOF-1)-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:AP008214
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003888
RefSeq:NP_001062289.1 UniGene:Os.10830
EnsemblPlants:LOC_Os08g41320.1 GeneID:4346087 KEGG:osa:4346087
eggNOG:NOG320619 OMA:ERISQRM ProtClustDB:CLSN2697487 Uniprot:Q84QW1
Length = 405
Score = 160 (61.4 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR RIS+RM+ LQDL P +K A MLD + +++ LQ+Q
Sbjct: 204 VRARRGQATDSHSLAERVRRERISQRMKVLQDLVPGCNKVIGKALMLDEIINYVQSLQRQ 263
Query: 366 VKLLT 370
V+ L+
Sbjct: 264 VEFLS 268
Score = 59 (25.8 bits), Expect = 8.3e-11, Sum P(2) = 8.3e-11
Identities = 39/169 (23%), Positives = 62/169 (36%)
Query: 52 LESLV--NGNSGGGNCE-DYRCFRPSSPEIDNFLAKYMLPCNGSGDSGSHASQEFGVKAM 108
L+++V G GGG+C D C P E L+ + NG G G G
Sbjct: 28 LDAIVAPGGGGGGGDCGLDKLCGDPGFAERAARLSSFN---NGGGGVGQRYGGA-GAGLF 83
Query: 109 KQEEPEPITEQNEYSNGSSQMVYQ-NLPVHSVGNDISVNVGNAMDNSYGVASSMAL---- 163
P P +++ G S+ + P S D + N + A++
Sbjct: 84 GMPPPAP----GDFAGGGSREASSVSDPASSAMKDAAANAKKRKSTAAAAAAAKGKGKEP 139
Query: 164 -----ENSMQERMATGNGS--NLTRQNSSPAGLFSNLGVDNGFAGMRNG 205
+ S +R TGNG + + + AG S++ D G G + G
Sbjct: 140 PVGEEKESDGKRCKTGNGEKESSVKPKAEQAGSDSSVE-DGGGGGQKQG 187
>TAIR|locus:2152551 [details] [associations]
symbol:AT5G48560 "AT5G48560" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AB015468 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 eggNOG:NOG283912
ProtClustDB:CLSN2684837 EMBL:AF488610 EMBL:BT002945 EMBL:BT005637
IPI:IPI00543091 RefSeq:NP_199667.1 UniGene:At.43769
ProteinModelPortal:Q9FJL4 SMR:Q9FJL4 IntAct:Q9FJL4 PaxDb:Q9FJL4
PRIDE:Q9FJL4 EnsemblPlants:AT5G48560.1 GeneID:834912
KEGG:ath:AT5G48560 TAIR:At5g48560 InParanoid:Q9FJL4 OMA:SASCYAT
PhylomeDB:Q9FJL4 Genevestigator:Q9FJL4 Uniprot:Q9FJL4
Length = 498
Score = 162 (62.1 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR +I ERM+ LQDL P +K T A MLD + +++ LQ+Q
Sbjct: 301 VRARRGQATDSHSLAERVRREKIGERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 360
Query: 366 VKLLT 370
V+ L+
Sbjct: 361 VEFLS 365
Score = 60 (26.2 bits), Expect = 8.4e-11, Sum P(2) = 8.4e-11
Identities = 41/171 (23%), Positives = 63/171 (36%)
Query: 24 DSSAHYDQQNDQLSDSSLTRYRSAPSSFLESLV--NGNSGGGNCEDYRCFRPSSPEIDNF 81
DSS +++ +Q S+ + SA SS + S N N GG + + R ++ N
Sbjct: 45 DSSFLWEKSTEQQQQQSI--FDSALSSLVSSPTPSNSNFSGGGGDGF-LIRELIGKLGNI 101
Query: 82 LAKYMLPCNGSGDS-GSHASQEFGVKAMKQEEPEPITEQNEYSNGSSQMVYQNLPVHSVG 140
N SG+ G+ S+ A P P T N S M+ + P+
Sbjct: 102 GNNN----NNSGEIYGTPMSRSASCYATPMSSPPPPTNSN-----SQMMMNRTTPLTEFS 152
Query: 141 NDISVNVGNAMDNSYGVASSMALENSM----QERMATGNGSNLTRQNSSPA 187
D A + +G S N+ N LTR +S+PA
Sbjct: 153 ADPGFAERAARFSCFGSRSFNGRTNTNLPINNGNNMVNNSGKLTRVSSTPA 203
>TAIR|locus:2139484 [details] [associations]
symbol:CIB1 "AT4G34530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IDA]
[GO:0009911 "positive regulation of flower development"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161585 EMBL:AL023094
HOGENOM:HOG000238007 EMBL:AF488596 EMBL:AK117846 EMBL:AY120741
EMBL:BT005313 IPI:IPI00519970 PIR:T05273 RefSeq:NP_195179.2
UniGene:At.48937 ProteinModelPortal:Q8GY61 SMR:Q8GY61
DIP:DIP-59356N IntAct:Q8GY61 PRIDE:Q8GY61 EnsemblPlants:AT4G34530.1
GeneID:829604 KEGG:ath:AT4G34530 TAIR:At4g34530 eggNOG:NOG251551
InParanoid:Q8GY61 OMA:SGYSHEM PhylomeDB:Q8GY61
ProtClustDB:CLSN2915063 Genevestigator:Q8GY61 Uniprot:Q8GY61
Length = 335
Score = 175 (66.7 bits), Expect = 9.0e-11, P = 9.0e-11
Identities = 43/110 (39%), Positives = 64/110 (58%)
Query: 264 TQNGNSGNQSTRLVHHLSLPKT---SAEMAAVEKFLHFQGSVPCKIRAKRGCATHPRSIA 320
T+ N +S + + H + + S + + V K L + +RA+RG AT SIA
Sbjct: 129 TEQNNGSTKSIKKMKHKAKKEENNFSNDSSKVTKELEKTDYI--HVRARRGQATDSHSIA 186
Query: 321 ERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 370
ERVRR +ISERM+ LQDL P DK T A MLD + +++ LQ+Q++ L+
Sbjct: 187 ERVRREKISERMKFLQDLVPGCDKITGKAGMLDEIINYVQSLQRQIEFLS 236
>UNIPROTKB|Q84LH4 [details] [associations]
symbol:OSJNBb0011H13.2 "Putative Helix-loop-helix
DNA-binding domain containing protein" species:39947 "Oryza sativa
Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0003677 EMBL:DP000009 EMBL:AP008209
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140 EMBL:AC120983
EMBL:AC135956 RefSeq:NP_001051150.1 UniGene:Os.24540
EnsemblPlants:LOC_Os03g51910.1 GeneID:4333984 KEGG:osa:4333984
eggNOG:NOG262475 OMA:SKQMMLS ProtClustDB:CLSN2694257 Uniprot:Q84LH4
Length = 327
Score = 173 (66.0 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 50/142 (35%), Positives = 79/142 (55%)
Query: 238 DDASFSGVKRARDSTCNMSFGLDAYETQNGNSGNQSTRLV---HHLSLP----KTSAEMA 290
DD S SG KR + +++ + ++ N G+Q T + +S+ K+ ++M
Sbjct: 71 DDHS-SGAKRRKGIDDHIALLNPSASSRIQNVGDQQTEVSSQQERISMEEDNQKSCSKMQ 129
Query: 291 AVEKFLHFQGSVP--CKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNT 348
+ E G+ +RAKRG AT+ S+AER+RR +ISERM+ LQDL P K T
Sbjct: 130 SKEDSSDGDGTKEDYVHVRAKRGQATNSHSLAERLRRKKISERMKLLQDLVPGCSKITGK 189
Query: 349 AEMLDLAVEHIKDLQKQVKLLT 370
A MLD + +++ LQ+QV+ L+
Sbjct: 190 AVMLDEIINYVQSLQRQVEFLS 211
>TAIR|locus:2132303 [details] [associations]
symbol:UNE12 "AT4G02590" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009567 "double fertilization forming a zygote and endosperm"
evidence=IMP] [GO:0031347 "regulation of defense response"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0007275 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000239571
ProtClustDB:CLSN2687635 EMBL:AC002330 EMBL:AL161494 GO:GO:0031347
GO:GO:0009567 EMBL:AF488592 EMBL:AF367328 EMBL:AY143951
EMBL:AY088218 IPI:IPI00545077 IPI:IPI00892352 PIR:T01090
RefSeq:NP_001031577.1 RefSeq:NP_001118919.1 RefSeq:NP_567245.1
UniGene:At.20028 ProteinModelPortal:O22768 SMR:O22768 IntAct:O22768
PaxDb:O22768 PRIDE:O22768 EnsemblPlants:AT4G02590.1
EnsemblPlants:AT4G02590.2 GeneID:828126 KEGG:ath:AT4G02590
TAIR:At4g02590 eggNOG:euNOG02041 InParanoid:O22768 OMA:PAWEKWS
PhylomeDB:O22768 Genevestigator:O22768 Uniprot:O22768
Length = 310
Score = 172 (65.6 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 37/74 (50%), Positives = 55/74 (74%)
Query: 297 HFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAV 356
H S+ ++RA+RG AT P SIAER+RR RI+ER+R LQ+L P ++K T+ A M+D V
Sbjct: 137 HQPTSIRPRVRARRGQATDPHSIAERLRRERIAERIRALQELVPTVNK-TDRAAMIDEIV 195
Query: 357 EHIKDLQKQVKLLT 370
+++K L+ QVK+L+
Sbjct: 196 DYVKFLRLQVKVLS 209
>TAIR|locus:2028804 [details] [associations]
symbol:CIB5 "AT1G26260" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009911 "positive regulation of flower development"
evidence=IGI] [GO:0048513 "organ development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC079829 GO:GO:0009911
Gene3D:4.10.280.10 SUPFAM:SSF47459 HOGENOM:HOG000238007
EMBL:AK117355 EMBL:BT005334 EMBL:AJ630483 EMBL:AY568655
EMBL:AF488608 IPI:IPI00529982 IPI:IPI00547855 PIR:H86388
RefSeq:NP_001031093.1 RefSeq:NP_173950.1 RefSeq:NP_973913.1
UniGene:At.41276 ProteinModelPortal:Q9C670 SMR:Q9C670 IntAct:Q9C670
STRING:Q9C670 EnsemblPlants:AT1G26260.1 EnsemblPlants:AT1G26260.2
GeneID:839167 KEGG:ath:AT1G26260 TAIR:At1g26260 eggNOG:NOG284637
InParanoid:Q9C670 OMA:ETHGYES PhylomeDB:Q9C670
ProtClustDB:CLSN2682645 Genevestigator:Q9C670 Uniprot:Q9C670
Length = 390
Score = 173 (66.0 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 68/235 (28%), Positives = 109/235 (46%)
Query: 146 NVGNAMDNSYGVASSMALENSMQERMAT----GNGSNLTRQNSSPAGLFSNLGVDNGFAG 201
N+ ++ + +A A ++ ER A G G + Q S G+ + G+
Sbjct: 63 NIDIPLEMGWNMAQFPA-DSGFIERAAKFSFFGCGEMMMNQQQSSLGVPDSTGLFLQDTQ 121
Query: 202 MRNGGCFRACNGTNLEASTSAS-RLINRVN----LSPGDPWDDASFSGVK-RARDSTCNM 255
+ +G + NG +AS R IN V+ S G+ DDA + S
Sbjct: 122 IPSGS--KLDNGPLTDASKLVKERSINNVSEDSQSSGGNGHDDAKCGQTSSKGFSSKKRK 179
Query: 256 SFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVPCKIRAKRGCATH 315
G D E ++ ++ + + KT++E + G + +RA+RG AT+
Sbjct: 180 RIGKDCEEEEDKKQKDEQSPTSN---ANKTNSEKQPSDSLK--DGYI--HMRARRGQATN 232
Query: 316 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 370
S+AERVRR +ISERM+ LQDL P DK T A MLD + +++ LQ Q++ L+
Sbjct: 233 SHSLAERVRREKISERMKFLQDLVPGCDKVTGKAVMLDEIINYVQSLQCQIEFLS 287
>UNIPROTKB|Q6Z2G7 [details] [associations]
symbol:P0680A05.9 "Putative bHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008208 eggNOG:NOG251551 EMBL:AP005323 EMBL:AK119183
RefSeq:NP_001047868.1 UniGene:Os.7751
EnsemblPlants:LOC_Os02g47660.1 GeneID:4330462 KEGG:osa:4330462
OMA:TVESLCQ ProtClustDB:CLSN2693116 Uniprot:Q6Z2G7
Length = 361
Score = 172 (65.6 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 36/65 (55%), Positives = 47/65 (72%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR RISERMR LQ+L P +K T A MLD + +++ LQKQ
Sbjct: 164 VRARRGQATDSHSLAERVRRERISERMRYLQELVPGCNKVTGKAGMLDEIINYVQSLQKQ 223
Query: 366 VKLLT 370
V+ L+
Sbjct: 224 VEFLS 228
>TAIR|locus:2201906 [details] [associations]
symbol:AT1G10120 "AT1G10120" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 EMBL:AC004122 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:BT012655 EMBL:AK221806 EMBL:AK229309
EMBL:AK230347 EMBL:AF488606 IPI:IPI00541831 PIR:T00632
RefSeq:NP_172483.4 UniGene:At.43391 UniGene:At.69296
ProteinModelPortal:Q6NKN9 SMR:Q6NKN9 EnsemblPlants:AT1G10120.1
GeneID:837549 KEGG:ath:AT1G10120 TAIR:At1g10120 eggNOG:NOG271189
HOGENOM:HOG000090626 InParanoid:Q6NKN9 OMA:GESSHED PhylomeDB:Q6NKN9
ProtClustDB:CLSN2681496 Genevestigator:Q6NKN9 Uniprot:Q6NKN9
Length = 366
Score = 172 (65.6 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 43/108 (39%), Positives = 66/108 (61%)
Query: 263 ETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVPCKIRAKRGCATHPRSIAER 322
++Q + +QS V+ S + +E A E ++H +RA+RG AT+ S+AER
Sbjct: 174 QSQKKHKNDQSKETVNKES---SQSEEAPKENYIH--------MRARRGQATNSHSLAER 222
Query: 323 VRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 370
VRR +ISERMR LQ+L P +K T A MLD + +++ LQ+QV+ L+
Sbjct: 223 VRREKISERMRLLQELVPGCNKITGKAVMLDEIINYVQSLQQQVEFLS 270
>TAIR|locus:505006688 [details] [associations]
symbol:AT5G50915 "AT5G50915" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009739
"response to gibberellin stimulus" evidence=IEP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0009739 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB017063 EMBL:AF428350 EMBL:AY057549 EMBL:AY113059
EMBL:AY087602 IPI:IPI00536793 RefSeq:NP_568745.1 RefSeq:NP_851163.1
UniGene:At.23601 ProteinModelPortal:Q93W88 SMR:Q93W88
EnsemblPlants:AT5G50915.1 EnsemblPlants:AT5G50915.2 GeneID:835164
KEGG:ath:AT5G50915 TAIR:At5g50915 eggNOG:NOG262059
HOGENOM:HOG000242938 InParanoid:Q93W88 OMA:ISERMRT PhylomeDB:Q93W88
ProtClustDB:CLSN2689980 Genevestigator:Q93W88 Uniprot:Q93W88
Length = 286
Score = 166 (63.5 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 35/65 (53%), Positives = 46/65 (70%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR +ISERMR LQ+L P DK T A MLD + +++ LQ Q
Sbjct: 136 VRARRGQATDSHSLAERVRREKISERMRTLQNLVPGCDKVTGKALMLDEIINYVQTLQTQ 195
Query: 366 VKLLT 370
V+ L+
Sbjct: 196 VEFLS 200
>TAIR|locus:2032990 [details] [associations]
symbol:CES "AT1G25330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:2000488 "positive regulation of brassinosteroid biosynthetic
process" evidence=IMP] [GO:0048441 "petal development"
evidence=RCA] [GO:0048443 "stamen development" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
eggNOG:NOG264296 EMBL:AC079374 EMBL:DQ446289 EMBL:DQ652859
EMBL:AK175757 EMBL:AY088885 EMBL:AF488607 IPI:IPI00519962
PIR:B86383 PIR:D86381 RefSeq:NP_564229.1 UniGene:At.48236
UniGene:At.63980 ProteinModelPortal:A4D998 SMR:A4D998
EnsemblPlants:AT1G25330.1 GeneID:839117 KEGG:ath:AT1G25330
GeneFarm:2907 TAIR:At1g25330 InParanoid:A4D998 PhylomeDB:A4D998
Genevestigator:A4D998 GO:GO:2000488 Uniprot:A4D998
Length = 223
Score = 158 (60.7 bits), Expect = 5.4e-10, P = 5.4e-10
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RAKRG AT S+AERVRR +I+ER++ LQDL P K A MLD+ +++++ LQ Q
Sbjct: 104 VRAKRGQATDSHSLAERVRREKINERLKCLQDLVPGCYKAMGMAVMLDVIIDYVRSLQNQ 163
Query: 366 VKLLT 370
++ L+
Sbjct: 164 IEFLS 168
>UNIPROTKB|Q5VR96 [details] [associations]
symbol:P0038C05.31-1 "Os06g0275600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008212 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP003044 RefSeq:NP_001057380.1 UniGene:Os.32526
EnsemblPlants:LOC_Os06g16400.1 EnsemblPlants:LOC_Os06g16400.2
GeneID:4340749 KEGG:osa:4340749 ProtClustDB:CLSN2697804
Uniprot:Q5VR96
Length = 437
Score = 168 (64.2 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT+ S+AERVRR +ISERM+ LQDL P K T A MLD + +++ LQ+Q
Sbjct: 260 VRARRGQATNSHSLAERVRREKISERMKYLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 319
Query: 366 VKLLT 370
V+ L+
Sbjct: 320 VEFLS 324
>TAIR|locus:2205420 [details] [associations]
symbol:AT1G68920 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AC011665 EMBL:AF488584 EMBL:AY128299
EMBL:BT002259 IPI:IPI00536565 IPI:IPI00545990 PIR:G96713
RefSeq:NP_001031255.1 RefSeq:NP_177058.1 RefSeq:NP_849863.2
UniGene:At.28096 ProteinModelPortal:Q9CAA9 SMR:Q9CAA9 STRING:Q9CAA9
EnsemblPlants:AT1G68920.1 EnsemblPlants:AT1G68920.2 GeneID:843225
KEGG:ath:AT1G68920 TAIR:At1g68920 eggNOG:NOG301979
HOGENOM:HOG000238007 InParanoid:Q3E6P7 OMA:MLKGGIF PhylomeDB:Q9CAA9
ProtClustDB:CLSN2682343 Genevestigator:Q9CAA9 Uniprot:Q9CAA9
Length = 486
Score = 168 (64.2 bits), Expect = 1.4e-09, P = 1.4e-09
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT+ S+AERVRR +ISERM+ LQDL P +K T A MLD + +++ LQ+Q
Sbjct: 303 VRARRGQATNSHSLAERVRREKISERMKFLQDLVPGCNKVTGKAVMLDEIINYVQSLQRQ 362
Query: 366 VKLLT 370
V+ L+
Sbjct: 363 VEFLS 367
>UNIPROTKB|Q69Y51 [details] [associations]
symbol:P0698A06.26-2 "Putative bHLH transcription factor
PTF1" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP003514
ProteinModelPortal:Q69Y51 EnsemblPlants:LOC_Os06g09370.3
Gramene:Q69Y51 HOGENOM:HOG000241730 Uniprot:Q69Y51
Length = 401
Score = 166 (63.5 bits), Expect = 1.6e-09, P = 1.6e-09
Identities = 36/66 (54%), Positives = 49/66 (74%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
+ RA+RG AT P SIAER+RR +ISERM+ LQ L PN +K + A MLD ++++K LQ
Sbjct: 238 RTRARRGQATDPHSIAERLRREKISERMKNLQVLVPNSNK-ADKASMLDEIIDYVKFLQL 296
Query: 365 QVKLLT 370
QVK+L+
Sbjct: 297 QVKVLS 302
>UNIPROTKB|Q75M33 [details] [associations]
symbol:P0668H12.5 "BHLH transcription factor" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008211 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000142 EMBL:AC084818 EMBL:AC073405 EMBL:HQ858853
EMBL:AK065864 RefSeq:NP_001054390.1 UniGene:Os.23082
EnsemblPlants:LOC_Os05g01256.1 EnsemblPlants:LOC_Os05g01256.2
GeneID:4337537 KEGG:osa:4337537 eggNOG:NOG296531 Uniprot:Q75M33
Length = 339
Score = 164 (62.8 bits), Expect = 1.7e-09, P = 1.7e-09
Identities = 34/65 (52%), Positives = 45/65 (69%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR +ISERM+ LQ L P DK T A MLD + +++ LQ Q
Sbjct: 180 VRARRGQATDSHSLAERVRREKISERMKMLQSLVPGCDKVTGKALMLDEIISYVQSLQNQ 239
Query: 366 VKLLT 370
V+ L+
Sbjct: 240 VEFLS 244
>UNIPROTKB|Q69JJ6 [details] [associations]
symbol:OSJNBa0026C08.22 "TA1 protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008215
ProtClustDB:CLSN2697804 EMBL:AP006169 EMBL:HQ858863 EMBL:AK121418
RefSeq:NP_001063455.1 UniGene:Os.38400
EnsemblPlants:LOC_Os09g29830.3 GeneID:4347355 KEGG:osa:4347355
Uniprot:Q69JJ6
Length = 428
Score = 165 (63.1 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT+ S+AER+RR +ISERM+ LQDL P K T A MLD + +++ LQ+Q
Sbjct: 248 VRARRGQATNSHSLAERLRREKISERMKLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQ 307
Query: 366 VKLLT 370
V+ L+
Sbjct: 308 VEFLS 312
>TAIR|locus:2079676 [details] [associations]
symbol:AT3G07340 "AT3G07340" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC009853 EMBL:AK175369 EMBL:AK175496
EMBL:AK176563 EMBL:AK176663 EMBL:BT026497 EMBL:AF488595
IPI:IPI00521004 RefSeq:NP_187390.1 UniGene:At.40357
ProteinModelPortal:Q9SRT2 SMR:Q9SRT2 EnsemblPlants:AT3G07340.1
GeneID:819922 KEGG:ath:AT3G07340 GeneFarm:2908 TAIR:At3g07340
eggNOG:NOG283912 InParanoid:Q9SRT2 OMA:MENELFM PhylomeDB:Q9SRT2
ProtClustDB:CLSN2684837 Genevestigator:Q9SRT2 Uniprot:Q9SRT2
Length = 456
Score = 166 (63.5 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR +ISERM+ LQDL P +K T A MLD + +++ LQ+Q
Sbjct: 258 VRARRGQATDSHSLAERVRREKISERMKLLQDLVPGCNKVTGKALMLDEIINYVQSLQRQ 317
Query: 366 VKLLT 370
V+ L+
Sbjct: 318 VEFLS 322
Score = 37 (18.1 bits), Expect = 5.0e-09, Sum P(2) = 5.0e-09
Identities = 10/37 (27%), Positives = 20/37 (54%)
Query: 29 YDQQNDQ-LSDSSLTRYRSAPSSFLESLVNGNSGGGN 64
+++ +Q + DS+L+ S+P+ + G GG N
Sbjct: 47 WEKSTEQSIFDSALSSLVSSPTPSNSNFSVGGVGGEN 83
>UNIPROTKB|Q6ZCV8 [details] [associations]
symbol:P0028A08.20 "Os08g0487700 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AP008214 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:CM000145 EMBL:AP004557 RefSeq:NP_001062102.1 UniGene:Os.60678
EnsemblPlants:LOC_Os08g38080.1 GeneID:4345892 KEGG:osa:4345892
eggNOG:NOG275480 Uniprot:Q6ZCV8
Length = 365
Score = 160 (61.4 bits), Expect = 6.1e-09, P = 6.1e-09
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA++G AT+ S+AER+RR +ISERM+ LQDL P K T A MLD + +++ LQ+Q
Sbjct: 176 VRARKGQATNNHSLAERLRREKISERMKLLQDLVPGCSKVTGKALMLDEIINYVQSLQRQ 235
Query: 366 VKLLT 370
V+ L+
Sbjct: 236 VEFLS 240
>UNIPROTKB|Q5N802 [details] [associations]
symbol:P0004D12.24 "BHLH transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP008207 eggNOG:NOG283912 EMBL:AP003433 EMBL:HQ858864
EMBL:AK101063 RefSeq:NP_001045188.1 UniGene:Os.5763
EnsemblPlants:LOC_Os01g68700.2 GeneID:4324327 KEGG:osa:4324327
ProtClustDB:CLSN2692207 Uniprot:Q5N802
Length = 481
Score = 158 (60.7 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR +IS+RM+ LQDL P +K A MLD + +++ LQ+Q
Sbjct: 277 VRARRGEATDSHSLAERVRREKISQRMKLLQDLVPGCNKVVGKAVMLDEIINYVQSLQRQ 336
Query: 366 VKLLT 370
V+ L+
Sbjct: 337 VEFLS 341
Score = 45 (20.9 bits), Expect = 7.5e-09, Sum P(2) = 7.5e-09
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 157 VASSMALENSMQERMATGNGSNLTRQNSSPAGLFSNLGVDNGFAGMRNG 205
+++S A E+S +R + SN + +S G + +NG G + G
Sbjct: 213 MSTSAAKEDSSGKRCKSTEESNAAAEENSGKGKAAQSNSENG-GGKKQG 260
>TAIR|locus:2202867 [details] [associations]
symbol:BPEp "AT1G59640" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0048446 "petal morphogenesis" evidence=IMP] [GO:0009062 "fatty
acid catabolic process" evidence=RCA] [GO:0009694 "jasmonic acid
metabolic process" evidence=RCA] [GO:0009753 "response to jasmonic
acid stimulus" evidence=RCA] [GO:0009827 "plant-type cell wall
modification" evidence=RCA] [GO:0009860 "pollen tube growth"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
[GO:0048441 "petal development" evidence=RCA] [GO:0048443 "stamen
development" evidence=RCA] [GO:0048481 "ovule development"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AM269753 EMBL:AM269754
EMBL:AC009317 EMBL:BT003964 EMBL:BT005064 EMBL:AY086373
EMBL:AB028232 IPI:IPI00530097 IPI:IPI00531813 PIR:B96620 PIR:T52428
RefSeq:NP_564749.1 RefSeq:NP_849829.1 UniGene:At.455
ProteinModelPortal:Q0JXE7 SMR:Q0JXE7 IntAct:Q0JXE7 STRING:Q0JXE7
PRIDE:Q0JXE7 EnsemblPlants:AT1G59640.2 GeneID:842254
KEGG:ath:AT1G59640 TAIR:At1g59640 eggNOG:NOG296410
InParanoid:Q0JXE7 OMA:RGASPEW PhylomeDB:Q0JXE7
ProtClustDB:CLSN2688917 Genevestigator:Q0JXE7 GO:GO:0048446
Uniprot:Q0JXE7
Length = 343
Score = 158 (60.7 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 41/111 (36%), Positives = 58/111 (52%)
Query: 264 TQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVPCK----IRAKRGCATHPRSI 319
T + G + + + K AE E Q P K +RA+RG AT S+
Sbjct: 90 TIGASEGENKRQKIDEVCDGKAEAESLGTETEQKKQQMEPTKDYIHVRARRGQATDSHSL 149
Query: 320 AERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 370
AER RR +ISERM+ LQDL P +K A +LD + +I+ LQ+QV+ L+
Sbjct: 150 AERARREKISERMKILQDLVPGCNKVIGKALVLDEIINYIQSLQRQVEFLS 200
>UNIPROTKB|Q6K8J6 [details] [associations]
symbol:OJ1669_F01.28 "Putative uncharacterized protein
OJ1669_F01.28" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] GO:GO:0005634
HOGENOM:HOG000242890 EMBL:AP004124 Gramene:Q6K8J6 Uniprot:Q6K8J6
Length = 153
Score = 137 (53.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 29/45 (64%), Positives = 35/45 (77%)
Query: 282 LPKTSA-EMAAVEKFLHFQ-GSVPCKIRAKRGCATHPRSIAERVR 324
+ TSA EMA ++++L Q VP K+RAKRGCATHPRSIAERVR
Sbjct: 88 MASTSALEMAGMDRYLQLQHDQVPFKVRAKRGCATHPRSIAERVR 132
>UNIPROTKB|Q84T08 [details] [associations]
symbol:OSJNBa0087C10.10 "BHLH transcription factor,
putative, expressed" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000238007 EMBL:AC108906 RefSeq:NP_001051605.1
UniGene:Os.33544 STRING:Q84T08 EnsemblPlants:LOC_Os03g58830.1
GeneID:4334471 KEGG:osa:4334471 OMA:GTSTSEW ProtClustDB:CLSN2694415
Uniprot:Q84T08
Length = 265
Score = 153 (58.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AER RR +ISERM+ LQDL P +K A +LD + +I+ LQ+Q
Sbjct: 136 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQALQRQ 195
Query: 366 VKLLT 370
V+ L+
Sbjct: 196 VEFLS 200
>TAIR|locus:2053766 [details] [associations]
symbol:AT2G42300 "AT2G42300" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC005956 EMBL:AY065411 EMBL:AY096521 EMBL:AK175584
EMBL:AK176019 EMBL:AK176634 EMBL:AF488583 IPI:IPI00532521
PIR:C84852 RefSeq:NP_850368.1 UniGene:At.28495
ProteinModelPortal:Q8VZ02 SMR:Q8VZ02 EnsemblPlants:AT2G42300.1
GeneID:818831 KEGG:ath:AT2G42300 TAIR:At2g42300 eggNOG:NOG301522
HOGENOM:HOG000037005 InParanoid:Q8VZ02 OMA:PEWGREE PhylomeDB:Q8VZ02
ProtClustDB:CLSN2680198 Genevestigator:Q8VZ02 Uniprot:Q8VZ02
Length = 327
Score = 155 (59.6 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AER RR +I+ RM+ LQ+L P DK TA +LD + H++ LQ+Q
Sbjct: 185 VRARRGQATDNHSLAERARREKINARMKLLQELVPGCDKIQGTALVLDEIINHVQTLQRQ 244
Query: 366 VKLLT 370
V++L+
Sbjct: 245 VEMLS 249
>TAIR|locus:2095198 [details] [associations]
symbol:AT3G23690 "AT3G23690" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
EMBL:AP000377 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000238007 EMBL:AY065441 EMBL:AY096536
EMBL:EU550216 EMBL:EU550217 EMBL:EU550218 EMBL:EU550219
EMBL:EU550220 EMBL:EU550221 EMBL:EU550222 EMBL:EU550223
EMBL:EU550224 EMBL:EU550225 EMBL:EU550226 EMBL:EU550227
EMBL:EU550228 EMBL:EU550229 EMBL:EU550230 EMBL:EU550231
EMBL:EU550232 EMBL:EU550233 EMBL:EU550234 EMBL:EU550235
EMBL:EU550236 EMBL:EU550237 EMBL:EU550238 EMBL:EU550239
EMBL:AF488609 IPI:IPI00545445 RefSeq:NP_189011.2 UniGene:At.6666
ProteinModelPortal:Q9LK48 SMR:Q9LK48 PaxDb:Q9LK48 PRIDE:Q9LK48
EnsemblPlants:AT3G23690.1 GeneID:821950 KEGG:ath:AT3G23690
TAIR:At3g23690 eggNOG:NOG292697 InParanoid:Q9LK48 OMA:MEFNANA
PhylomeDB:Q9LK48 ProtClustDB:CLSN2917952 Genevestigator:Q9LK48
Uniprot:Q9LK48
Length = 371
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AER RR +ISERM LQDL P ++ T A MLD + +++ LQ+Q
Sbjct: 191 VRARRGQATDSHSLAERARREKISERMTLLQDLVPGCNRITGKAVMLDEIINYVQSLQRQ 250
Query: 366 VKLLT 370
V+ L+
Sbjct: 251 VEFLS 255
>TAIR|locus:2014144 [details] [associations]
symbol:BEE1 "BR enhanced expression 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AC013354
EMBL:AY138253 EMBL:AF488579 EMBL:AK117269 EMBL:BT005268
IPI:IPI00539846 RefSeq:NP_173276.2 UniGene:At.46141
ProteinModelPortal:Q8GZ13 SMR:Q8GZ13 IntAct:Q8GZ13
EnsemblPlants:AT1G18400.1 GeneID:838421 KEGG:ath:AT1G18400
TAIR:At1g18400 eggNOG:euNOG17991 HOGENOM:HOG000090950
InParanoid:Q8GZ13 PhylomeDB:Q8GZ13 ProtClustDB:CLSN2680013
Genevestigator:Q8GZ13 Uniprot:Q8GZ13
Length = 260
Score = 150 (57.9 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AERVRR +I+ER+R LQD+ P K A MLD + +++ LQ Q
Sbjct: 145 VRARRGQATDSHSLAERVRRGKINERLRCLQDMVPGCYKAMGMATMLDEIINYVQSLQNQ 204
Query: 366 VKLLT 370
V+ L+
Sbjct: 205 VEFLS 209
>TAIR|locus:2115200 [details] [associations]
symbol:BEE2 "AT4G36540" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009740 "gibberellic acid mediated signaling pathway"
evidence=RCA] [GO:0010162 "seed dormancy process" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
PROSITE:PS00678 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL161589 EMBL:Z99708
EMBL:AF488591 EMBL:AF370231 EMBL:AY059122 EMBL:AY054588
EMBL:BT000388 EMBL:AY084997 EMBL:AY138254 IPI:IPI00540245
IPI:IPI00548266 PIR:D85431 RefSeq:NP_195372.1 RefSeq:NP_849508.1
UniGene:At.25403 ProteinModelPortal:Q93VJ4 SMR:Q93VJ4 IntAct:Q93VJ4
PRIDE:Q93VJ4 EnsemblPlants:AT4G36540.1 GeneID:829806
KEGG:ath:AT4G36540 TAIR:At4g36540 eggNOG:NOG240651
InParanoid:Q93VJ4 OMA:ELECHID PhylomeDB:Q93VJ4
ProtClustDB:CLSN2685556 Genevestigator:Q93VJ4 Uniprot:Q93VJ4
Length = 304
Score = 152 (58.6 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 34/87 (39%), Positives = 52/87 (59%)
Query: 284 KTSAEMAAVEKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMD 343
K + M+ E Q +RA+RG AT S+AER RR +IS++M+ LQD+ P +
Sbjct: 119 KGKSNMSNTETSSEIQKPDYIHVRARRGEATDRHSLAERARREKISKKMKCLQDIVPGCN 178
Query: 344 KQTNTAEMLDLAVEHIKDLQKQVKLLT 370
K T A MLD + +++ LQ+QV+ L+
Sbjct: 179 KVTGKAGMLDEIINYVQSLQQQVEFLS 205
>TAIR|locus:2172209 [details] [associations]
symbol:AT5G62610 "AT5G62610" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HSSP:P36956 EMBL:AB020751 HOGENOM:HOG000238007 EMBL:AY072104
EMBL:AY123023 EMBL:AY084578 EMBL:AF488611 IPI:IPI00518025
RefSeq:NP_201067.1 UniGene:At.24534 UniGene:At.24682
ProteinModelPortal:Q9LV17 SMR:Q9LV17 PaxDb:Q9LV17 PRIDE:Q9LV17
EnsemblPlants:AT5G62610.1 GeneID:836382 KEGG:ath:AT5G62610
GeneFarm:2935 TAIR:At5g62610 eggNOG:NOG269855 InParanoid:Q9LV17
OMA:DDSSKMV PhylomeDB:Q9LV17 ProtClustDB:CLSN2916786
Genevestigator:Q9LV17 Uniprot:Q9LV17
Length = 281
Score = 145 (56.1 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 30/65 (46%), Positives = 44/65 (67%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AER RR +ISE+M LQD+ P +K A +LD + +I+ LQ+Q
Sbjct: 153 VRARRGQATDRHSLAERARREKISEKMTALQDIIPGCNKIIGKALVLDEIINYIQSLQRQ 212
Query: 366 VKLLT 370
V+ L+
Sbjct: 213 VEFLS 217
Score = 43 (20.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 25/98 (25%), Positives = 40/98 (40%)
Query: 92 SGDSGSHASQEFGVKAMKQEEPEPITEQNEYSNGSSQMVYQNLPVHSVGNDISVNVGNAM 151
SG+ A++E V + T + SS+MV + S GN++ + G+
Sbjct: 53 SGNKDVSAAEESTVTDLTAGWGSRKTRDLNSEDDSSKMVSSS----SSGNELKES-GDKK 107
Query: 152 DNSYGVASSMALENSMQ---ERMATGNGSNLTRQNSSP 186
G S + SM+ E + G GS T Q + P
Sbjct: 108 RKLCGSESGNG-DGSMRPEGETSSGGGGSKATEQKNKP 144
>TAIR|locus:2118934 [details] [associations]
symbol:RSL2 "AT4G33880" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0048766 "root hair initiation"
evidence=IMP] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0009733 GO:GO:0003677 GO:GO:0016049 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL031032
EMBL:AL161584 HOGENOM:HOG000240244 GO:GO:0048766 EMBL:AF488616
EMBL:BT003137 EMBL:AK228110 IPI:IPI00526320 PIR:T05216
RefSeq:NP_195114.2 UniGene:At.31542 ProteinModelPortal:Q84WK0
SMR:Q84WK0 EnsemblPlants:AT4G33880.1 GeneID:829531
KEGG:ath:AT4G33880 TAIR:At4g33880 eggNOG:NOG318365
InParanoid:Q84WK0 OMA:TINTNSY PhylomeDB:Q84WK0
ProtClustDB:CLSN2680247 Genevestigator:Q84WK0 Uniprot:Q84WK0
Length = 352
Score = 150 (57.9 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 34/68 (50%), Positives = 47/68 (69%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
K RA RG AT P+S+ R RR RI+ER+R LQ+L PN K + + ML+ AV ++K LQ
Sbjct: 265 KTRASRGAATDPQSLYARKRRERINERLRILQNLVPNGTK-VDISTMLEEAVHYVKFLQL 323
Query: 365 QVKLLTDN 372
Q+KLL+ +
Sbjct: 324 QIKLLSSD 331
Score = 42 (19.8 bits), Expect = 3.7e-08, Sum P(2) = 3.7e-08
Identities = 14/40 (35%), Positives = 22/40 (55%)
Query: 146 NVGNAMDNSYGVASSMALENSMQERMATGNGSNLTRQNSS 185
NV + DN+ G E +++R NG+ ++RQNSS
Sbjct: 194 NVEMSGDNNEGEEEEG--ETKLKKRK---NGAMMSRQNSS 228
>TAIR|locus:2027809 [details] [associations]
symbol:BEE3 "AT1G73830" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000090950 ProtClustDB:CLSN2680013 EMBL:AF488585
EMBL:AC012679 EMBL:AK118781 EMBL:BT006055 IPI:IPI00541876
RefSeq:NP_177524.2 UniGene:At.34949 ProteinModelPortal:Q8GWK7
SMR:Q8GWK7 EnsemblPlants:AT1G73830.1 GeneID:843719
KEGG:ath:AT1G73830 TAIR:At1g73830 eggNOG:NOG264296
InParanoid:Q8GWK7 OMA:LENNFHQ PhylomeDB:Q8GWK7
Genevestigator:Q8GWK7 Uniprot:Q8GWK7
Length = 261
Score = 149 (57.5 bits), Expect = 3.9e-08, P = 3.9e-08
Identities = 31/65 (47%), Positives = 44/65 (67%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT SIAERVRR +I+ER++ LQD+ P K A MLD + +++ LQ Q
Sbjct: 147 VRARRGQATDSHSIAERVRRGKINERLKCLQDIVPGCYKTMGMATMLDEIINYVQSLQNQ 206
Query: 366 VKLLT 370
V+ L+
Sbjct: 207 VEFLS 211
>UNIPROTKB|Q69WS3 [details] [associations]
symbol:OJ1118_E12.15 "Putative bHLH protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003743
ProteinModelPortal:Q69WS3 Gramene:Q69WS3 Uniprot:Q69WS3
Length = 268
Score = 149 (57.5 bits), Expect = 4.3e-08, P = 4.3e-08
Identities = 31/64 (48%), Positives = 43/64 (67%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RA+RG AT S+AER RR +ISERM+ LQDL P +K A +LD + +I+ LQ Q
Sbjct: 128 VRARRGQATDSHSLAERARREKISERMKILQDLVPGCNKVIGKASVLDEIINYIQSLQHQ 187
Query: 366 VKLL 369
V+ +
Sbjct: 188 VEFM 191
>UNIPROTKB|Q8GZV6 [details] [associations]
symbol:OJ1017C11.10 "Putative uncharacterized protein
OJ1017C11.10" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR001810
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50181 PROSITE:PS50888
SMART:SM00256 SMART:SM00353 GO:GO:0005634 SUPFAM:SSF81383
Gene3D:4.10.280.10 SUPFAM:SSF47459 InterPro:IPR019955
PROSITE:PS50053 EMBL:AC135157 ProteinModelPortal:Q8GZV6
Gramene:Q8GZV6 Uniprot:Q8GZV6
Length = 776
Score = 163 (62.4 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 306 IRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQ 365
+RAKRG AT+ S+AER RR +I+ERM+ LQDL P +K T A MLD + +++ LQ+Q
Sbjct: 628 VRAKRGQATNSHSLAERFRREKINERMKLLQDLVPGCNKITGKAMMLDEIINYVQSLQRQ 687
Query: 366 VKLLT 370
V+ L+
Sbjct: 688 VEFLS 692
Score = 37 (18.1 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 90 NGSGDSGSHASQEFGVKAMKQEE 112
+G G S H+ +E G M Q E
Sbjct: 585 SGEGSSSLHSQEETG--EMPQRE 605
>UNIPROTKB|Q948F6 [details] [associations]
symbol:OSJNBa0049O12.18 "Putative SPATULA" species:4530
"Oryza sativa" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AC069158
ProteinModelPortal:Q948F6 Gramene:Q948F6 Genevestigator:Q948F6
Uniprot:Q948F6
Length = 298
Score = 149 (57.5 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 32/72 (44%), Positives = 49/72 (68%)
Query: 299 QGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEH 358
Q + P + R KR A +++E+ RR+RI+E+M+ LQ L PN K T+ A MLD A+E+
Sbjct: 19 QPTRPARPRGKRSRAAEVHNLSEKRRRSRINEKMKALQSLIPNSSK-TDKASMLDDAIEY 77
Query: 359 IKDLQKQVKLLT 370
+K LQ QV++L+
Sbjct: 78 LKQLQLQVQMLS 89
>UNIPROTKB|Q2QMV9 [details] [associations]
symbol:LOC_Os12g39850 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:DP000011 EMBL:CM000149
KEGG:dosa:Os12t0589000-00 OMA:DESEMMA Uniprot:Q2QMV9
Length = 304
Score = 148 (57.2 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 34/75 (45%), Positives = 49/75 (65%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
K RA RG AT P+S+ R RR RI+ER++ LQ+L PN K + + ML+ AV ++K LQ
Sbjct: 215 KSRAGRGAATDPQSLYARKRRERINERLKTLQNLVPNGTK-VDISTMLEEAVHYVKFLQL 273
Query: 365 QVKLLTDNKAKCMCP 379
Q+KLL+ ++ P
Sbjct: 274 QIKLLSSDEMWMYAP 288
>TAIR|locus:2199221 [details] [associations]
symbol:RSL4 "AT1G27740" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0016049
"cell growth" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0048766 "root hair
initiation" evidence=IMP] [GO:0048765 "root hair cell
differentiation" evidence=RCA] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0045893 GO:GO:0009733
GO:GO:0003677 GO:GO:0016049 GO:GO:0003700 GO:GO:0006351
EMBL:AC012375 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY085436
IPI:IPI00523669 PIR:B86402 RefSeq:NP_564293.1 UniGene:At.41015
ProteinModelPortal:Q8LEG1 SMR:Q8LEG1 EnsemblPlants:AT1G27740.1
GeneID:839667 KEGG:ath:AT1G27740 TAIR:At1g27740 eggNOG:NOG244031
HOGENOM:HOG000240244 InParanoid:Q8LEG1 OMA:DESNTNW PhylomeDB:Q8LEG1
ProtClustDB:CLSN2688032 Genevestigator:Q8LEG1 GO:GO:0048766
Uniprot:Q8LEG1
Length = 258
Score = 145 (56.1 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 33/72 (45%), Positives = 49/72 (68%)
Query: 301 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIK 360
SV K RA +G AT P+S+ R RR +I+ER++ LQ+L PN K + + ML+ AV ++K
Sbjct: 162 SVKGKTRATKGTATDPQSLYARKRREKINERLKTLQNLVPNGTK-VDISTMLEEAVHYVK 220
Query: 361 DLQKQVKLLTDN 372
LQ Q+KLL+ +
Sbjct: 221 FLQLQIKLLSSD 232
>TAIR|locus:2155543 [details] [associations]
symbol:HEC1 "HECATE 1" species:3702 "Arabidopsis
thaliana" [GO:0005634 "nucleus" evidence=ISM] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0010500 "transmitting tissue
development" evidence=IGI] [GO:0048462 "carpel formation"
evidence=IMP] [GO:0048445 "carpel morphogenesis" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:AF488618 EMBL:AK228927 IPI:IPI00530790
RefSeq:NP_201507.1 UniGene:At.28829 ProteinModelPortal:Q9FHA7
SMR:Q9FHA7 IntAct:Q9FHA7 EnsemblPlants:AT5G67060.1 GeneID:836841
KEGG:ath:AT5G67060 TAIR:At5g67060 eggNOG:NOG267961
HOGENOM:HOG000242863 InParanoid:Q9FHA7 OMA:FLFNSTH PhylomeDB:Q9FHA7
ProtClustDB:CLSN2684406 Genevestigator:Q9FHA7 GO:GO:0048462
GO:GO:0010500 Uniprot:Q9FHA7
Length = 241
Score = 133 (51.9 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 45/139 (32%), Positives = 66/139 (47%)
Query: 233 PGDPWDDASFSGVKRARDSTCNMSFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAV 292
PG + + +T S LD + N N+ N T + + A M +
Sbjct: 54 PGFRYGSGLLTNPSSISPNTAYSSVFLD--KRNNSNNNNNGTNMAAMREMIFRIAVMQPI 111
Query: 293 EKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEML 352
+ + P K R R + P+S+A R RR RISER+R LQ L P K +TA ML
Sbjct: 112 H--IDPEAVKPPKRRNVR-ISKDPQSVAARHRRERISERIRILQRLVPGGTKM-DTASML 167
Query: 353 DLAVEHIKDLQKQVKLLTD 371
D A+ ++K L+KQV+ L +
Sbjct: 168 DEAIHYVKFLKKQVQSLEE 186
Score = 41 (19.5 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 7 PNFKYPEGDLRKNQEFMDSSAHYDQQNDQLSDSSLTRYRS 46
PN + D F+ +S HY + ++ RY S
Sbjct: 22 PNSSFFSPDHNNTYPFLFNSTHYQSDHSMTNEPGF-RYGS 60
>TAIR|locus:504954900 [details] [associations]
symbol:AT5G43175 "AT5G43175" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB008267 HOGENOM:HOG000240244 ProtClustDB:CLSN2688032
IPI:IPI00519888 RefSeq:NP_680385.1 UniGene:At.55333
ProteinModelPortal:Q3E7L7 SMR:Q3E7L7 EnsemblPlants:AT5G43175.1
GeneID:834335 KEGG:ath:AT5G43175 TAIR:At5g43175 eggNOG:NOG323547
InParanoid:Q3E7L7 OMA:MENEAFV PhylomeDB:Q3E7L7
Genevestigator:Q3E7L7 Uniprot:Q3E7L7
Length = 223
Score = 136 (52.9 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 301 SVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIK 360
S+ K +A RG A+ P+S+ R RR RI++R++ LQ L PN K + + ML+ AV ++K
Sbjct: 127 SLKRKAKANRGIASDPQSLYARKRRERINDRLKTLQSLVPNGTK-VDISTMLEDAVHYVK 185
Query: 361 DLQKQVKLLT 370
LQ Q+KLL+
Sbjct: 186 FLQLQIKLLS 195
>TAIR|locus:2115080 [details] [associations]
symbol:SPT "AT4G36930" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0009908 "flower
development" evidence=NAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS;TAS]
[GO:0009409 "response to cold" evidence=IMP] [GO:0010114 "response
to red light" evidence=IMP] [GO:0010187 "negative regulation of
seed germination" evidence=IMP] [GO:0010154 "fruit development"
evidence=IMP] [GO:0048440 "carpel development" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007623 "circadian
rhythm" evidence=IEP] InterPro:IPR011598 InterPro:IPR024097
InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0003677
GO:GO:0007623 GO:GO:0009409 GO:GO:0003700 GO:GO:0006351
GO:GO:0010114 GO:GO:0010187 GO:GO:0048440 GO:GO:0010154
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:Z99707 EMBL:AL161590 EMBL:AF319540
EMBL:AK229267 EMBL:BT026462 IPI:IPI00541204 PIR:B85436
RefSeq:NP_568010.1 UniGene:At.4639 ProteinModelPortal:Q9FUA4
SMR:Q9FUA4 IntAct:Q9FUA4 STRING:Q9FUA4 EnsemblPlants:AT4G36930.1
GeneID:829847 KEGG:ath:AT4G36930 TAIR:At4g36930 eggNOG:NOG276771
HOGENOM:HOG000090429 InParanoid:Q9FUA4 OMA:NAPEMIN PhylomeDB:Q9FUA4
ProtClustDB:CLSN2917674 Genevestigator:Q9FUA4 GermOnline:AT4G36930
Uniprot:Q9FUA4
Length = 373
Score = 142 (55.0 bits), Expect = 6.9e-07, P = 6.9e-07
Identities = 42/129 (32%), Positives = 66/129 (51%)
Query: 242 FSGVKRARDSTCNMSFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGS 301
FSG + N S G + G SGN++ A V++ +
Sbjct: 132 FSGGGNNNNVQGNSS-GTRVSSSSVGASGNETDEY----DCESEEGGEAVVDEAPSSKSG 186
Query: 302 VPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKD 361
+ +KR A +++E+ RR+RI+E+M+ LQ L PN +K T+ A MLD A+E++K
Sbjct: 187 PSSRSSSKRCRAAEVHNLSEKRRRSRINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQ 245
Query: 362 LQKQVKLLT 370
LQ QV++LT
Sbjct: 246 LQLQVQMLT 254
>UNIPROTKB|Q5VRS4 [details] [associations]
symbol:OSJNBa0015I14.14 "Basic helix-loop-helix protein
SPATULA-like" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0006355 EMBL:CM000143
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AP002536 KEGG:dosa:Os06t0164400-01
Uniprot:Q5VRS4
Length = 315
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 28/63 (44%), Positives = 46/63 (73%)
Query: 308 AKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVK 367
+KR A +++E+ RR++I+E+M+ LQ L PN +K T+ A MLD A+E++K LQ QV+
Sbjct: 99 SKRSRAAEVHNLSEKRRRSKINEKMKALQSLIPNSNK-TDKASMLDEAIEYLKQLQLQVQ 157
Query: 368 LLT 370
+L+
Sbjct: 158 MLS 160
>TAIR|locus:2144791 [details] [associations]
symbol:HEC3 "AT5G09750" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] InterPro:IPR011598
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB020752
EMBL:AL353994 GO:GO:0048462 GO:GO:0010500 IPI:IPI00522404
PIR:T49923 RefSeq:NP_196537.1 UniGene:At.65500
ProteinModelPortal:Q9LXD8 SMR:Q9LXD8 IntAct:Q9LXD8 STRING:Q9LXD8
EnsemblPlants:AT5G09750.1 GeneID:830835 KEGG:ath:AT5G09750
TAIR:At5g09750 eggNOG:NOG238444 HOGENOM:HOG000210013
InParanoid:Q9LXD8 OMA:NDPIGMA ProtClustDB:CLSN2916890
Genevestigator:Q9LXD8 Uniprot:Q9LXD8
Length = 224
Score = 132 (51.5 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 29/57 (50%), Positives = 41/57 (71%)
Query: 316 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDN 372
P+S+A R RR RISER+R LQ L P K +TA MLD A+ ++K L++Q++LL +N
Sbjct: 129 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIRYVKFLKRQIRLLNNN 184
>UNIPROTKB|Q5NAE0 [details] [associations]
symbol:P0498A12.33 "Putative BP-5 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003020
ProteinModelPortal:Q5NAE0 Gramene:Q5NAE0 Uniprot:Q5NAE0
Length = 565
Score = 140 (54.3 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 30/71 (42%), Positives = 46/71 (64%)
Query: 309 KRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKL 368
KR +++ER RR RI+E+MR LQ+L PN +K + A MLD A+E++K LQ QV++
Sbjct: 309 KRSRTAEVHNLSERRRRDRINEKMRALQELIPNCNK-IDKASMLDEAIEYLKTLQLQVQM 367
Query: 369 LTDNKAKCMCP 379
++ C+ P
Sbjct: 368 MSMGTGLCIPP 378
>TAIR|locus:2126876 [details] [associations]
symbol:UNE10 "AT4G00050" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0009567
"double fertilization forming a zygote and endosperm" evidence=IMP]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR011598
InterPro:IPR024097 InterPro:IPR024102 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0009506 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 EMBL:AL161471 HSSP:P22415 GO:GO:0009567
EMBL:AF069299 EMBL:AF488561 EMBL:AK117229 EMBL:BT025971
IPI:IPI00517893 PIR:T01333 RefSeq:NP_191916.3 UniGene:At.44779
ProteinModelPortal:Q8GZ38 SMR:Q8GZ38 IntAct:Q8GZ38
EnsemblPlants:AT4G00050.1 GeneID:828175 KEGG:ath:AT4G00050
TAIR:At4g00050 eggNOG:NOG239145 HOGENOM:HOG000084918
InParanoid:Q8GZ38 OMA:MMSRMNM PhylomeDB:Q8GZ38
ProtClustDB:CLSN2690671 Genevestigator:Q8GZ38 Uniprot:Q8GZ38
Length = 399
Score = 137 (53.3 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 49/151 (32%), Positives = 74/151 (49%)
Query: 238 DDASFSGVKRAR-----DSTCNMSFGLDAYET--QNGNSGNQSTRLVHHLSLPKTSAEMA 290
D + G KRAR + +D Y+ + + G+ + H S+ + +M
Sbjct: 135 DGRTMGGGKRARVAPEWSGGGSQRLTMDTYDVGFTSTSMGSHDNTIDDHDSVCHSRPQME 194
Query: 291 -AVEKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTA 349
EK + SV K R+ R A H +S ER RR +I++RM+ LQ L PN K T+ A
Sbjct: 195 DEEEKKAGGKSSVSTK-RS-RAAAIHNQS--ERKRRDKINQRMKTLQKLVPNSSK-TDKA 249
Query: 350 EMLDLAVEHIKDLQKQVKLLTD-NKAKCMCP 379
MLD +E++K LQ QV +++ N M P
Sbjct: 250 SMLDEVIEYLKQLQAQVSMMSRMNMPSMMLP 280
>UNIPROTKB|Q7FA23 [details] [associations]
symbol:OSJNBa0058K23.6 "Os04g0618600 protein" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
GO:GO:0006355 Gene3D:4.10.280.10 SUPFAM:SSF47459 HSSP:P36956
PANTHER:PTHR10014 PANTHER:PTHR10014:SF30 EMBL:AP008210
EMBL:CM000141 EMBL:AL662970 RefSeq:NP_001053893.1 UniGene:Os.4548
EnsemblPlants:LOC_Os04g52770.1 GeneID:4337015 KEGG:osa:4337015
eggNOG:NOG275283 OMA:RSAEFHN ProtClustDB:CLSN2695118 Uniprot:Q7FA23
Length = 181
Score = 125 (49.1 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 30/77 (38%), Positives = 45/77 (58%)
Query: 303 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDL 362
P R R H + +ER RR RI+E+++ LQ+L PN K T+ MLD A++++K L
Sbjct: 6 PTPTRRSRSAEFH--NFSERRRRDRINEKLKALQELLPNCTK-TDKVSMLDEAIDYLKSL 62
Query: 363 QKQVKLLTDNKAKCMCP 379
Q Q+++L K M P
Sbjct: 63 QLQLQMLVMGKG--MAP 77
>TAIR|locus:2155503 [details] [associations]
symbol:ALC "AT5G67110" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0010047 "fruit dehiscence" evidence=IMP]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010047 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AB020742 EMBL:BT028946 EMBL:AF488605 IPI:IPI00537617
IPI:IPI00846166 IPI:IPI00846501 RefSeq:NP_001078810.1
RefSeq:NP_001078811.1 RefSeq:NP_201512.1 UniGene:At.28825
HSSP:P36956 ProteinModelPortal:Q9FHA2 SMR:Q9FHA2 IntAct:Q9FHA2
STRING:Q9FHA2 EnsemblPlants:AT5G67110.1 GeneID:836846
KEGG:ath:AT5G67110 TAIR:At5g67110 eggNOG:NOG329583
HOGENOM:HOG000033902 InParanoid:Q9FHA2 OMA:HTRINET PhylomeDB:Q9FHA2
ProtClustDB:CLSN2686902 Genevestigator:Q9FHA2 PANTHER:PTHR10014
PANTHER:PTHR10014:SF30 Uniprot:Q9FHA2
Length = 210
Score = 128 (50.1 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 29/75 (38%), Positives = 46/75 (61%)
Query: 295 FLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDL 354
F H + + KR +++E+ RR++I+E+M+ LQ L PN +K T+ A MLD
Sbjct: 76 FEHKRSGAKQRNSLKRNIDAQFHNLSEKKRRSKINEKMKALQKLIPNSNK-TDKASMLDE 134
Query: 355 AVEHIKDLQKQVKLL 369
A+E++K LQ QV+ L
Sbjct: 135 AIEYLKQLQLQVQTL 149
>TAIR|locus:2156015 [details] [associations]
symbol:RSL1 "AT5G37800" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000006063 ProtClustDB:CLSN2681768 EMBL:AB016873
IPI:IPI00523734 RefSeq:NP_198596.1 UniGene:At.55195
ProteinModelPortal:Q9FJ00 SMR:Q9FJ00 EnsemblPlants:AT5G37800.1
GeneID:833758 KEGG:ath:AT5G37800 TAIR:At5g37800 eggNOG:NOG303056
InParanoid:Q9FJ00 OMA:MDFNASS PhylomeDB:Q9FJ00
Genevestigator:Q9FJ00 Uniprot:Q9FJ00
Length = 307
Score = 116 (45.9 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 29/66 (43%), Positives = 43/66 (65%)
Query: 305 KIRAKRGCATH-PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQ 363
KI+ K + P+S+A + RR RISER++ LQ+L PN K + ML+ A+ ++K LQ
Sbjct: 199 KIKPKATTSPKDPQSLAAKNRRERISERLKVLQELVPNGTK-VDLVTMLEKAIGYVKFLQ 257
Query: 364 KQVKLL 369
QVK+L
Sbjct: 258 VQVKVL 263
Score = 57 (25.1 bits), Expect = 5.1e-06, Sum P(2) = 5.1e-06
Identities = 31/129 (24%), Positives = 48/129 (37%)
Query: 115 PITEQNEYS--NGSSQMVYQNLPVHSVGNDISVNVGNAMDNSYGVASSMALENSMQERMA 172
P+T + +G+ Y H V + IS V NS+ SS L ++ + A
Sbjct: 88 PVTNGGAFPVVDGNMSYSYDGWSHHQV-DSISPRVIKT-PNSFETTSSFGLTSNSMSKPA 145
Query: 173 TGNGSNLTRQNSSPAGLFSNLGVDNGFAGMRNGGCFRACNGTNLEASTSASRLIN----- 227
T +G+ + S N+G + + G R G N + S S N
Sbjct: 146 TNHGNGDWLYSGST---IVNIGSRHESTSPKLAGNKRPFTGENTQLSKKPSSGTNGKIKP 202
Query: 228 RVNLSPGDP 236
+ SP DP
Sbjct: 203 KATTSPKDP 211
>TAIR|locus:2012345 [details] [associations]
symbol:PIF3 "AT1G09530" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009639 "response to red or far red
light" evidence=IMP] [GO:0010017 "red or far-red light signaling
pathway" evidence=RCA;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0031539
"positive regulation of anthocyanin metabolic process"
evidence=IMP] [GO:0009740 "gibberellic acid mediated signaling
pathway" evidence=IMP] [GO:0009704 "de-etiolation" evidence=IMP]
[GO:0007623 "circadian rhythm" evidence=RCA] [GO:0009630
"gravitropism" evidence=RCA] [GO:0007165 "signal transduction"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AC003970
GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0010017
GO:GO:0009704 GO:GO:0009740 GO:GO:0031539 EMBL:AF100166
EMBL:AF251693 EMBL:AF088280 EMBL:AK117255 EMBL:EF193482
EMBL:EF193483 EMBL:EF193484 EMBL:EF193485 EMBL:EF193486
EMBL:EF193487 EMBL:EF193488 EMBL:EF193489 EMBL:EF193490
EMBL:EF193491 EMBL:EF193492 EMBL:EF193493 EMBL:EF193494
EMBL:EF193495 EMBL:EF193496 IPI:IPI00530297 PIR:H86228
RefSeq:NP_172424.1 RefSeq:NP_849626.1 UniGene:At.10926
ProteinModelPortal:O80536 SMR:O80536 DIP:DIP-33892N IntAct:O80536
STRING:O80536 EnsemblPlants:AT1G09530.1 EnsemblPlants:AT1G09530.2
GeneID:837479 KEGG:ath:AT1G09530 TAIR:At1g09530 eggNOG:NOG285764
InParanoid:O80536 KO:K12126 OMA:WENGQIS PhylomeDB:O80536
ProtClustDB:CLSN2679266 Genevestigator:O80536 GermOnline:AT1G09530
Uniprot:O80536
Length = 524
Score = 136 (52.9 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 28/63 (44%), Positives = 45/63 (71%)
Query: 308 AKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVK 367
+KR + +++ER RR RI+E+MR LQ+L PN +K + A MLD A+E++K LQ QV+
Sbjct: 339 SKRSRSAEVHNLSERRRRDRINEKMRALQELIPNCNK-VDKASMLDEAIEYLKSLQLQVQ 397
Query: 368 LLT 370
+++
Sbjct: 398 IMS 400
>TAIR|locus:2183078 [details] [associations]
symbol:SRS8 "AT5G33210" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
"nucleus" evidence=ISM] [GO:0008150 "biological_process"
evidence=ND] EMBL:CP002688 InterPro:IPR007818 InterPro:IPR006510
Pfam:PF05142 TIGRFAMs:TIGR01623 IPI:IPI00529608 RefSeq:NP_198306.1
UniGene:At.55108 EnsemblPlants:AT5G33210.1 GeneID:833279
KEGG:ath:AT5G33210 PhylomeDB:F4KH89 ArrayExpress:F4KH89
Uniprot:F4KH89
Length = 173
Score = 121 (47.7 bits), Expect = 5.9e-06, P = 5.9e-06
Identities = 21/25 (84%), Positives = 24/25 (96%)
Query: 298 FQGSVPCKIRAKRGCATHPRSIAER 322
F+ SVPC++RAKRGCATHPRSIAER
Sbjct: 9 FEDSVPCRVRAKRGCATHPRSIAER 33
>UNIPROTKB|Q6K8Y4 [details] [associations]
symbol:OJ1695_H09.18 "Basic helix-loop-helix (BHLH)-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000239571 EMBL:AP003975 EMBL:AP004094
EnsemblPlants:LOC_Os02g55250.1 OMA:GQDDFFD Uniprot:Q6K8Y4
Length = 463
Score = 118 (46.6 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 25/48 (52%), Positives = 37/48 (77%)
Query: 323 VRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLT 370
+RR RI+ERM+ LQ+L PN +K T+ A MLD ++++K LQ QVK+L+
Sbjct: 251 LRRERIAERMKALQELVPNANK-TDKASMLDEIIDYVKFLQLQVKVLS 297
Score = 60 (26.2 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 13/17 (76%), Positives = 14/17 (82%)
Query: 307 RAKRGCATHPRSIAERV 323
RA+RG AT P SIAERV
Sbjct: 213 RARRGQATDPHSIAERV 229
>UNIPROTKB|Q6Z9R3 [details] [associations]
symbol:P0461F06.33 "BHLH protein family-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000145
eggNOG:NOG315110 EMBL:AP004693 EnsemblPlants:LOC_Os08g36740.1
OMA:SAMREMI Uniprot:Q6Z9R3
Length = 246
Score = 127 (49.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 33/67 (49%), Positives = 44/67 (65%)
Query: 303 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDL 362
P K R R +T P+S+A R+RR RISER+R LQ L P K +TA MLD A+ ++K L
Sbjct: 149 PPKRRNVR-ISTDPQSVAARMRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFL 206
Query: 363 QKQVKLL 369
+ QV+ L
Sbjct: 207 KTQVQSL 213
>TAIR|locus:2061634 [details] [associations]
symbol:PIL5 "phytochrome interacting factor 3-like 5"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS;IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0015995 "chlorophyll
biosynthetic process" evidence=IMP] [GO:0010187 "negative
regulation of seed germination" evidence=IGI;IMP] [GO:0010313
"phytochrome binding" evidence=IDA] [GO:0009959 "negative
gravitropism" evidence=IMP;TAS] [GO:0010029 "regulation of seed
germination" evidence=TAS] [GO:0010099 "regulation of
photomorphogenesis" evidence=TAS] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0009740 "gibberellic acid mediated
signaling pathway" evidence=RCA;IMP] [GO:0010100 "negative
regulation of photomorphogenesis" evidence=IMP] [GO:0010161 "red
light signaling pathway" evidence=IDA] [GO:0006783 "heme
biosynthetic process" evidence=IMP] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0009686 "gibberellin biosynthetic
process" evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
[GO:0048608 "reproductive structure development" evidence=RCA]
InterPro:IPR011598 InterPro:IPR024097 InterPro:IPR024102
Pfam:PF00010 PROSITE:PS50888 SMART:SM00353 GO:GO:0005634
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677 GO:GO:0003700
GO:GO:0006351 GO:GO:0010187 GO:GO:0006783 Gene3D:4.10.280.10
SUPFAM:SSF47459 PANTHER:PTHR10014 PANTHER:PTHR10014:SF30
GO:GO:0010161 EMBL:AC006081 HSSP:P61244 HOGENOM:HOG000240264
GO:GO:0015995 GO:GO:0010100 GO:GO:0009740 GO:GO:0009959
EMBL:AF488560 EMBL:AB103113 EMBL:AK228820 EMBL:BT029775
IPI:IPI00527244 IPI:IPI00537020 PIR:A84586 RefSeq:NP_001189559.1
RefSeq:NP_179608.2 RefSeq:NP_849996.1 UniGene:At.43003
UniGene:At.69322 ProteinModelPortal:Q8GZM7 SMR:Q8GZM7 IntAct:Q8GZM7
STRING:Q8GZM7 PRIDE:Q8GZM7 EnsemblPlants:AT2G20180.2
EnsemblPlants:AT2G20180.3 GeneID:816538 KEGG:ath:AT2G20180
TAIR:At2g20180 eggNOG:NOG264707 InParanoid:Q8GZM7 OMA:QEDEMTS
PhylomeDB:Q8GZM7 ProtClustDB:CLSN2690808 Genevestigator:Q8GZM7
GO:GO:0010313 Uniprot:Q8GZM7
Length = 478
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 27/62 (43%), Positives = 44/62 (70%)
Query: 309 KRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKL 368
KR A +++ER RR RI+ERM+ LQ+L P +K ++ A MLD A+E++K LQ Q+++
Sbjct: 281 KRSRAAEVHNLSERKRRDRINERMKALQELIPRCNK-SDKASMLDEAIEYMKSLQLQIQM 339
Query: 369 LT 370
++
Sbjct: 340 MS 341
>UNIPROTKB|Q8GRJ1 [details] [associations]
symbol:OJ1343_B12.103 "Transcription factor BHLH9-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 HSSP:P61244 EMBL:AP003824 EMBL:AP004010
Uniprot:Q8GRJ1
Length = 417
Score = 130 (50.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 32/84 (38%), Positives = 50/84 (59%)
Query: 303 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDL 362
P R R H +++ER RR RI+E++R LQ+L P+ +K T+ A +LD A+E++K L
Sbjct: 221 PAAKRRTRAAEVH--NLSERRRRDRINEKLRALQELVPHCNK-TDKASILDEAIEYLKSL 277
Query: 363 QKQVKLL--TDNKAKCMCPNKQKL 384
Q QV+++ T M P +L
Sbjct: 278 QMQVQIMWMTTGIVPMMFPGTHQL 301
>UNIPROTKB|Q9ASJ3 [details] [associations]
symbol:P0439B06.24 "Putative uncharacterized protein
P0439B06.24" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP002882 UniGene:Os.30617
ProteinModelPortal:Q9ASJ3 Gramene:Q9ASJ3 OMA:KAITYVK
ProtClustDB:CLSN2918925 Uniprot:Q9ASJ3
Length = 294
Score = 127 (49.8 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 30/57 (52%), Positives = 40/57 (70%)
Query: 316 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLL-TD 371
P+S A +VRR RISER++ LQDL PN K + ML+ A+ ++K LQ QVK+L TD
Sbjct: 208 PQSAAAKVRRERISERLKVLQDLVPNGTK-VDLVTMLEKAINYVKFLQLQVKVLATD 263
Score = 38 (18.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 10/26 (38%), Positives = 11/26 (42%)
Query: 184 SSPAGLFSNLGVDNGFAGMRNGGCFR 209
SS + S L D G GGC R
Sbjct: 55 SSSSSSSSVLSFDQAAVGGSGGGCAR 80
>TAIR|locus:2074865 [details] [associations]
symbol:HEC2 "AT3G50330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0010500 "transmitting tissue development" evidence=IGI]
[GO:0048462 "carpel formation" evidence=IMP] [GO:0080126 "ovary
septum development" evidence=IGI] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL132976
HOGENOM:HOG000242863 ProtClustDB:CLSN2684406 GO:GO:0048462
GO:GO:0010500 EMBL:BT010607 EMBL:AK175679 EMBL:AK175912
EMBL:AK176020 IPI:IPI00532987 PIR:T45579 RefSeq:NP_190602.1
UniGene:At.35505 ProteinModelPortal:Q9SND4 SMR:Q9SND4 IntAct:Q9SND4
EnsemblPlants:AT3G50330.1 GeneID:824195 KEGG:ath:AT3G50330
TAIR:At3g50330 eggNOG:NOG315110 InParanoid:Q9SND4 OMA:NANMAAM
PhylomeDB:Q9SND4 Genevestigator:Q9SND4 GO:GO:0080126 Uniprot:Q9SND4
Length = 231
Score = 124 (48.7 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 316 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDN 372
P+S+A R RR RISER+R LQ L P K +TA MLD A+ ++K L+KQV+ L ++
Sbjct: 129 PQSVAARHRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFLKKQVQSLEEH 184
>UNIPROTKB|Q6AV35 [details] [associations]
symbol:OSJNBa0063J18.7 "Putative transcription factor"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 GO:GO:0003677 EMBL:DP000009
EMBL:AP008209 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:CM000140
EMBL:AC107206 RefSeq:NP_001050667.1 UniGene:Os.79759
EnsemblPlants:LOC_Os03g42100.1 GeneID:4333457 KEGG:osa:4333457
eggNOG:NOG300710 OMA:CTSENDS ProtClustDB:CLSN2694086 Uniprot:Q6AV35
Length = 310
Score = 123 (48.4 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 29/75 (38%), Positives = 47/75 (62%)
Query: 305 KIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQK 364
K ++ AT P+S+ R RR RI+ER++ LQ+L PN K + + ML+ A+ ++K LQ
Sbjct: 220 KAQSGHRSATDPQSLYARKRRERINERLKILQNLVPNGTK-VDISTMLEEAMHYVKFLQL 278
Query: 365 QVKLLTDNKAKCMCP 379
Q+KLL+ ++ P
Sbjct: 279 QIKLLSSDEMWMYAP 293
Score = 43 (20.2 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 17/70 (24%), Positives = 34/70 (48%)
Query: 177 SNLTRQNSSPAGLFSNLGVDNGFAGMRNGGCFRACNGTNLEASTSASRLINRVNLSPGDP 236
S+ T NS+ +G F+ + + + G A G +++ A++ ++ + GDP
Sbjct: 70 SSTTSSNSA-SGSFTLIAPRSEYEGYYVSDSNEAALGISIQEQ-GAAQFMDAILNRNGDP 127
Query: 237 -WDDASFSGV 245
+DD + S V
Sbjct: 128 GFDDLADSSV 137
>TAIR|locus:2089418 [details] [associations]
symbol:AT3G21330 "AT3G21330" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AP001305 EMBL:AF488617 EMBL:BT004279 EMBL:BT020364
IPI:IPI00541948 RefSeq:NP_188770.1 UniGene:At.38078
ProteinModelPortal:Q8S3D2 SMR:Q8S3D2 EnsemblPlants:AT3G21330.1
GeneID:821687 KEGG:ath:AT3G21330 TAIR:At3g21330 eggNOG:NOG330001
HOGENOM:HOG000095219 InParanoid:Q9LIG3 OMA:LMARELC PhylomeDB:Q8S3D2
ProtClustDB:CLSN2685101 Genevestigator:Q8S3D2 Uniprot:Q8S3D2
Length = 373
Score = 127 (49.8 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 52/153 (33%), Positives = 74/153 (48%)
Query: 236 PWDDASFSGVKRARDSTCNMSFGLDAYETQNGNSGN----QSTRLVHHLSLPKTSA---- 287
P DD+ G K D + S E + G S N ST L ++ P A
Sbjct: 188 PQDDSEKGGFKLIYDENQSKS-KKPRTEKERGGSSNISFQHSTCLSDNVE-PDAEAIAQM 245
Query: 288 -EM---AAVEKFLHFQGSVPCKIRAKR-GCATHPRSIAERVRRTRISERMRKLQDLFPNM 342
EM AA + ++F + K + K +T P+++A R RR RISE++R LQ L P
Sbjct: 246 KEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQTLVPGG 305
Query: 343 DKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAK 375
K +TA MLD A ++K L+ QVK L + + K
Sbjct: 306 TKM-DTASMLDEAANYLKFLRAQVKALENLRPK 337
>TAIR|locus:2028957 [details] [associations]
symbol:RHD6 "AT1G66470" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0048766 "root
hair initiation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005739
GO:GO:0005634 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
Gene3D:4.10.280.10 SUPFAM:SSF47459 GO:GO:0048766 EMBL:AC074025
EMBL:AY128310 EMBL:BT006320 EMBL:AF488615 IPI:IPI00529158
PIR:C96690 RefSeq:NP_176820.1 UniGene:At.35765
ProteinModelPortal:Q9C707 SMR:Q9C707 IntAct:Q9C707
EnsemblPlants:AT1G66470.1 GeneID:842965 KEGG:ath:AT1G66470
TAIR:At1g66470 eggNOG:NOG301765 HOGENOM:HOG000006063
InParanoid:Q9C707 OMA:HESFPPP PhylomeDB:Q9C707
ProtClustDB:CLSN2681768 Genevestigator:Q9C707 Uniprot:Q9C707
Length = 298
Score = 118 (46.6 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 316 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLL-TD 371
P+S+A + RR RISER++ LQ+L PN K + ML+ A+ ++K LQ QVK+L TD
Sbjct: 205 PQSLAAKNRRERISERLKILQELVPNGTK-VDLVTMLEKAISYVKFLQVQVKVLATD 260
Score = 46 (21.3 bits), Expect = 3.6e-05, Sum P(2) = 3.6e-05
Identities = 13/33 (39%), Positives = 19/33 (57%)
Query: 175 NGSN-LTRQNSSPAGLFSNLGVDNGFAGMRNGG 206
N +N L++QNSS + S+ G+D A GG
Sbjct: 9 NETNYLSKQNSSSSEDLSSPGLDQPDAAYAGGG 41
>TAIR|locus:4010713915 [details] [associations]
symbol:AT4G28811 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
HOGENOM:HOG000240264 EMBL:AJ519811 IPI:IPI00518617 PIR:H85335
PIR:T04518 RefSeq:NP_001078462.1 UniGene:At.46149
ProteinModelPortal:Q8GT73 SMR:Q8GT73 PRIDE:Q8GT73
EnsemblPlants:AT4G28811.1 GeneID:5008170 KEGG:ath:AT4G28811
TAIR:At4g28811 eggNOG:NOG314238 PhylomeDB:Q8GT73
ProtClustDB:CLSN2699107 Genevestigator:Q8GT73 Uniprot:Q8GT73
Length = 544
Score = 131 (51.2 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 39/127 (30%), Positives = 65/127 (51%)
Query: 246 KRARDSTCNMSF-GLDAYETQNGN-SGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVP 303
K T S+ G++ ET+ + T++ +T AE+ E+ H GS
Sbjct: 296 KEVATETAGTSYSGVNKAETERVQIQPERETKITEDKKREETIAEIQGTEE-AH--GSTS 352
Query: 304 CKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQ 363
KR A +++ER RR RI+ERM+ LQ+L P K T+ ML+ +E++K LQ
Sbjct: 353 ----RKRSRAADMHNLSERRRRERINERMKTLQELLPRCRK-TDKVSMLEDVIEYVKSLQ 407
Query: 364 KQVKLLT 370
Q+++++
Sbjct: 408 LQIQMMS 414
Score = 40 (19.1 bits), Expect = 3.9e-05, Sum P(2) = 3.9e-05
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 218 ASTSASRLINRVNLSPGDPWDDASFSGVKRARDSTCNMSF 257
ASTSA+R + +L+P P + + R + M+F
Sbjct: 186 ASTSATRPQSSASLAPTPPPPSVPYGQIPVERRTENFMNF 225
>UNIPROTKB|Q67TR8 [details] [associations]
symbol:B1342C04.6 "Basic helix-loop-helix (BHLH)-like
protein" species:39947 "Oryza sativa Japonica Group" [GO:0005634
"nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 Gene3D:4.10.280.10
SUPFAM:SSF47459 EMBL:AP008215 EMBL:AP005655 EMBL:AP006057
EMBL:AK060477 EMBL:AK070458 RefSeq:NP_001063357.1 UniGene:Os.51063
EnsemblPlants:LOC_Os09g28210.1 GeneID:4347252 KEGG:osa:4347252
OMA:AYPAFHA ProtClustDB:CLSN2697769 Uniprot:Q67TR8
Length = 236
Score = 122 (48.0 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 32/67 (47%), Positives = 43/67 (64%)
Query: 303 PCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDL 362
P K R R + P+S+A R+RR RISER+R LQ L P K +TA MLD A+ ++K L
Sbjct: 139 PPKRRNVR-ISKDPQSVAARLRRERISERIRILQRLVPGGTKM-DTASMLDEAIHYVKFL 196
Query: 363 QKQVKLL 369
+ QV+ L
Sbjct: 197 KSQVQSL 203
>TAIR|locus:2053733 [details] [associations]
symbol:PIF4 "AT2G43010" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS;IDA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0010017 "red or far-red light
signaling pathway" evidence=RCA;IMP] [GO:0010161 "red light
signaling pathway" evidence=IGI] [GO:0009704 "de-etiolation"
evidence=IMP] [GO:0010600 "regulation of auxin biosynthetic
process" evidence=IDA] [GO:0010928 "regulation of auxin mediated
signaling pathway" evidence=IDA] [GO:0000165 "MAPK cascade"
evidence=RCA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=RCA] [GO:0006612 "protein targeting to
membrane" evidence=RCA] [GO:0007623 "circadian rhythm"
evidence=RCA] [GO:0009617 "response to bacterium" evidence=RCA]
[GO:0009630 "gravitropism" evidence=RCA] [GO:0009862 "systemic
acquired resistance, salicylic acid mediated signaling pathway"
evidence=RCA] [GO:0009867 "jasmonic acid mediated signaling
pathway" evidence=RCA] [GO:0010310 "regulation of hydrogen peroxide
metabolic process" evidence=RCA] [GO:0010363 "regulation of
plant-type hypersensitive response" evidence=RCA] [GO:0030003
"cellular cation homeostasis" evidence=RCA] [GO:0031348 "negative
regulation of defense response" evidence=RCA] [GO:0035304
"regulation of protein dephosphorylation" evidence=RCA]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 GO:GO:0009585 Gene3D:4.10.280.10
SUPFAM:SSF47459 GO:GO:0010161 GO:GO:0009704 GO:GO:0010928
EMBL:AC006224 EMBL:AJ440755 EMBL:AF251694 EMBL:AY142625
EMBL:AF360221 EMBL:EF193514 EMBL:EF193515 EMBL:EF193516
EMBL:EF193517 EMBL:EF193518 EMBL:EF193519 EMBL:EF193520
EMBL:EF193521 EMBL:EF193522 EMBL:EF193523 EMBL:EF193524
EMBL:EF193525 EMBL:EF193526 EMBL:EF193527 IPI:IPI00520232
IPI:IPI00534557 PIR:H84860 RefSeq:NP_565991.2 UniGene:At.19015
ProteinModelPortal:Q8W2F3 SMR:Q8W2F3 IntAct:Q8W2F3 STRING:Q8W2F3
EnsemblPlants:AT2G43010.1 GeneID:818903 KEGG:ath:AT2G43010
TAIR:At2g43010 eggNOG:NOG244119 InParanoid:Q8W2F3 KO:K16189
OMA:IRETEME PhylomeDB:Q8W2F3 ProtClustDB:CLSN2680212
Genevestigator:Q8W2F3 GermOnline:AT2G43010 GO:GO:0010600
Uniprot:Q8W2F3
Length = 430
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 38/116 (32%), Positives = 62/116 (53%)
Query: 256 SFGLDAYETQNGN--SGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVPCKIRAKRGCA 313
SFG D E +G + ++ + ++H S A K GS R R
Sbjct: 206 SFGKDIKEMASGRCITTDRKRKRINHTD-ESVSLSDAIGNKSNQRSGSN----RRSRAAE 260
Query: 314 THPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLL 369
H +++ER RR RI+ERM+ LQ+L P+ K T+ A +LD A++++K LQ Q++++
Sbjct: 261 VH--NLSERRRRDRINERMKALQELIPHCSK-TDKASILDEAIDYLKSLQLQLQVM 313
>UNIPROTKB|Q2R0R9 [details] [associations]
symbol:LOC_Os11g41640 "Helix-loop-helix DNA-binding domain
containing protein" species:39947 "Oryza sativa Japonica Group"
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 GO:GO:0003677
EMBL:DP000010 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240244 KEGG:dosa:Os11t0634700-00 Gramene:Q2R0R9
OMA:SLYAKRR Uniprot:Q2R0R9
Length = 246
Score = 121 (47.7 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 28/73 (38%), Positives = 44/73 (60%)
Query: 307 RAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQV 366
R + C+ +S+ + RR RI+ER+R LQ L PN K + + ML+ AV+++K LQ Q+
Sbjct: 156 RGHKQCSKDTQSLYAKRRRERINERLRILQQLVPNGTK-VDISTMLEEAVQYVKFLQLQI 214
Query: 367 KLLTDNKAKCMCP 379
KLL+ + P
Sbjct: 215 KLLSSDDTWMFAP 227
>UNIPROTKB|Q8S0N2 [details] [associations]
symbol:P0692C11.41-1 "BHLH transcription factor-like"
species:39947 "Oryza sativa Japonica Group" [GO:0005634 "nucleus"
evidence=IC] InterPro:IPR011598 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP008207
EMBL:CM000138 EMBL:AP003381 EMBL:AP003273 EMBL:AK106119
RefSeq:NP_001044022.1 UniGene:Os.25546 GeneID:4327679
KEGG:osa:4327679 eggNOG:NOG254276 OMA:EPDMEAM
ProtClustDB:CLSN2919059 Uniprot:Q8S0N2
Length = 393
Score = 122 (48.0 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 38/126 (30%), Positives = 64/126 (50%)
Query: 246 KRARDSTCNMSFGLDAYETQNGNSGNQSTRLVHHLSLPKTSAEMAAVEKFLHFQGSVPC- 304
+RA S +++FG + G + + ++ K AA + +H
Sbjct: 213 RRASTSATSITFGHQPHHHHAGATTAGYEPDMEAMAQVKEMIYRAAAMRPVHLGTEAAAD 272
Query: 305 KIRAKR-GCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQ 363
K R K ++ P+++A R+RR R+S+R+R LQ L P +K +TA MLD A ++K L+
Sbjct: 273 KPRRKNVRISSDPQTVAARLRRERVSDRLRVLQKLVPGGNKM-DTASMLDEAASYLKFLK 331
Query: 364 KQVKLL 369
QV+ L
Sbjct: 332 SQVQKL 337
Score = 42 (19.8 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 191 SNLGVDNGFAGMRNGGCFRACNG 213
+ L D G G GGC + +G
Sbjct: 43 AQLQCDGGVGGGDGGGCLQGTSG 65
>UNIPROTKB|Q6ZFY4 [details] [associations]
symbol:OJ1311_H06.19 "BHLH protein-like" species:39947
"Oryza sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP003983
EMBL:AP004161 Uniprot:Q6ZFY4
Length = 298
Score = 121 (47.7 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 29/57 (50%), Positives = 40/57 (70%)
Query: 316 PRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLL-TD 371
P+S+A + RR RISER+R LQ+L PN K + ML+ A+ ++K LQ QVK+L TD
Sbjct: 207 PQSLAAKNRRERISERLRILQELVPNGTK-VDLVTMLEKAISYVKFLQLQVKVLATD 262
>TAIR|locus:2204569 [details] [associations]
symbol:AT1G30670 "AT1G30670" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0003677
GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10 SUPFAM:SSF47459
EMBL:AC007060 EMBL:AF488587 IPI:IPI00540602 PIR:B86432
RefSeq:NP_174355.1 UniGene:At.40503 ProteinModelPortal:Q9SA82
SMR:Q9SA82 PRIDE:Q9SA82 EnsemblPlants:AT1G30670.1 GeneID:839947
KEGG:ath:AT1G30670 TAIR:At1g30670 eggNOG:NOG324437
HOGENOM:HOG000090323 InParanoid:Q9SA82 OMA:RRITEKT PhylomeDB:Q9SA82
ProtClustDB:CLSN2914140 Genevestigator:Q9SA82 Uniprot:Q9SA82
Length = 264
Score = 112 (44.5 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 317 RSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNKAKC 376
+SIA R RR RI+E+ ++L L P K NTAEM + A +++K LQ Q+++L + K
Sbjct: 139 QSIAARKRRRRITEKTQELGKLIPGSQKH-NTAEMFNAAAKYVKFLQAQIEILQLKQTKM 197
Query: 377 MCPNKQKL 384
+ K+
Sbjct: 198 QTLDSSKV 205
Score = 45 (20.9 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/27 (37%), Positives = 17/27 (62%)
Query: 18 KNQEFMDSSAHYDQQNDQLSDSSLTRY 44
K+Q+ +DSS H++ +D S S + Y
Sbjct: 72 KHQKLIDSSFHFNS-HDPFSPSPESNY 97
>UNIPROTKB|Q69TX2 [details] [associations]
symbol:P0021C04.13 "BHLH protein-like" species:39947 "Oryza
sativa Japonica Group" [GO:0005634 "nucleus" evidence=IC]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AP004687
ProteinModelPortal:Q69TX2 EnsemblPlants:LOC_Os06g10820.1
Gramene:Q69TX2 HOGENOM:HOG000241748 Uniprot:Q69TX2
Length = 211
Score = 116 (45.9 bits), Expect = 0.00014, P = 0.00014
Identities = 27/85 (31%), Positives = 47/85 (55%)
Query: 285 TSAEMAAVEKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDK 344
T+ ++ + + P R ++ P+S+A R+RR R+S+RMR LQ L P
Sbjct: 93 TTTRQGVIDAAEEEEAAAPRPRRRNARVSSEPQSVAARLRRERVSQRMRALQRLVPG-GA 151
Query: 345 QTNTAEMLDLAVEHIKDLQKQVKLL 369
+ +TA ML+ A+ ++K L+ V+ L
Sbjct: 152 RLDTASMLEEAIRYVKFLKGHVQSL 176
>TAIR|locus:2077680 [details] [associations]
symbol:PIL6 "AT3G59060" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0009585 "red,
far-red light phototransduction" evidence=IMP] [GO:0009693
"ethylene biosynthetic process" evidence=IMP] [GO:0010600
"regulation of auxin biosynthetic process" evidence=IDA]
[GO:0010928 "regulation of auxin mediated signaling pathway"
evidence=IDA] [GO:0000096 "sulfur amino acid metabolic process"
evidence=RCA] [GO:0006546 "glycine catabolic process" evidence=RCA]
[GO:0006636 "unsaturated fatty acid biosynthetic process"
evidence=RCA] [GO:0006733 "oxidoreduction coenzyme metabolic
process" evidence=RCA] [GO:0006766 "vitamin metabolic process"
evidence=RCA] [GO:0007623 "circadian rhythm" evidence=RCA]
[GO:0008652 "cellular amino acid biosynthetic process"
evidence=RCA] [GO:0009072 "aromatic amino acid family metabolic
process" evidence=RCA] [GO:0009073 "aromatic amino acid family
biosynthetic process" evidence=RCA] [GO:0009106 "lipoate metabolic
process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic process"
evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009630 "gravitropism" evidence=RCA] [GO:0009684
"indoleacetic acid biosynthetic process" evidence=RCA] [GO:0009695
"jasmonic acid biosynthetic process" evidence=RCA] [GO:0009965
"leaf morphogenesis" evidence=RCA] [GO:0010017 "red or far-red
light signaling pathway" evidence=RCA] [GO:0015995 "chlorophyll
biosynthetic process" evidence=RCA] [GO:0019288 "isopentenyl
diphosphate biosynthetic process, mevalonate-independent pathway"
evidence=RCA] [GO:0019344 "cysteine biosynthetic process"
evidence=RCA] [GO:0019748 "secondary metabolic process"
evidence=RCA] [GO:0019761 "glucosinolate biosynthetic process"
evidence=RCA] [GO:0030003 "cellular cation homeostasis"
evidence=RCA] [GO:0030154 "cell differentiation" evidence=RCA]
[GO:0044272 "sulfur compound biosynthetic process" evidence=RCA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=RCA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009693 GO:GO:0003677 GO:GO:0003700 GO:GO:0006351
EMBL:AL163527 GO:GO:0009585 Gene3D:4.10.280.10 SUPFAM:SSF47459
HOGENOM:HOG000240264 HSSP:P22415 GO:GO:0010928
ProtClustDB:CLSN2680212 GO:GO:0010600 EMBL:AF488598 EMBL:AB103112
EMBL:AY081271 EMBL:BT000049 IPI:IPI00541791 IPI:IPI00543835
IPI:IPI00890365 PIR:T47788 RefSeq:NP_001030889.1
RefSeq:NP_001030890.1 RefSeq:NP_191465.3 RefSeq:NP_851021.1
UniGene:At.43437 UniGene:At.67329 ProteinModelPortal:Q84LH8
SMR:Q84LH8 IntAct:Q84LH8 STRING:Q84LH8 EnsemblPlants:AT3G59060.2
EnsemblPlants:AT3G59060.3 EnsemblPlants:AT3G59060.4 GeneID:825075
KEGG:ath:AT3G59060 TAIR:At3g59060 eggNOG:NOG259206
InParanoid:Q84LH8 OMA:SHCGSNQ PhylomeDB:Q84LH8
Genevestigator:Q84LH8 Uniprot:Q84LH8
Length = 444
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 24/61 (39%), Positives = 43/61 (70%)
Query: 309 KRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKL 368
+R A +++ER RR RI+ERM+ LQ+L P+ + T+ A +LD A++++K LQ Q+++
Sbjct: 253 RRSRAAEVHNLSERRRRDRINERMKALQELIPHCSR-TDKASILDEAIDYLKSLQMQLQV 311
Query: 369 L 369
+
Sbjct: 312 M 312
>TAIR|locus:2117788 [details] [associations]
symbol:AT4G28800 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 IPI:IPI00517558
IPI:IPI01020410 PIR:T04519 RefSeq:NP_194609.5 UniGene:At.71648
ProteinModelPortal:Q9SVU7 SMR:Q9SVU7 GeneID:829001
KEGG:ath:AT4G28800 TAIR:At4g28800 InParanoid:Q9SVU7
Genevestigator:Q9SVU7 Uniprot:Q9SVU7
Length = 445
Score = 120 (47.3 bits), Expect = 0.00027, P = 0.00027
Identities = 29/85 (34%), Positives = 46/85 (54%)
Query: 283 PKTSAEMAAVEKFLHFQGSVPCKIRAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNM 342
P T +++ A E+ H KR ++AER RR +I+E+M+ LQ L P
Sbjct: 227 PATESKLKAREE-THGTEEARGSTSRKRSRTAEMHNLAERRRREKINEKMKTLQQLIPRC 285
Query: 343 DKQTNTAEMLDLAVEHIKDLQKQVK 367
+K T + LD A+E++K LQ Q++
Sbjct: 286 NKSTKVST-LDDAIEYVKSLQSQIQ 309
>TAIR|locus:4010713916 [details] [associations]
symbol:AT4G28815 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR011598 Pfam:PF00010
PROSITE:PS50888 SMART:SM00353 GO:GO:0005634 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
EMBL:AL161573 Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353
PIR:H85335 PIR:T04518 EMBL:AJ577586 IPI:IPI00530422
RefSeq:NP_001078463.1 UniGene:At.71260 ProteinModelPortal:Q7XHI7
SMR:Q7XHI7 EnsemblPlants:AT4G28815.1 GeneID:5008171
KEGG:ath:AT4G28815 TAIR:At4g28815 eggNOG:NOG83291 PhylomeDB:Q7XHI7
Genevestigator:Q7XHI7 Uniprot:Q7XHI7
Length = 307
Score = 116 (45.9 bits), Expect = 0.00038, P = 0.00038
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 309 KRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKL 368
KR A ++AER RR +I+ERM+ LQ L P +K T + ML+ +E++K L+ Q+
Sbjct: 147 KRSRAAEMHNLAERRRREKINERMKTLQQLIPRCNKSTKVS-MLEDVIEYVKSLEMQINQ 205
Query: 369 LTDNKAKCM 377
+ A M
Sbjct: 206 FMPHMAMGM 214
>TAIR|locus:2163163 [details] [associations]
symbol:PIF7 "AT5G61270" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0003690 "double-stranded DNA binding" evidence=IDA] [GO:0009416
"response to light stimulus" evidence=IDA] [GO:0009704
"de-etiolation" evidence=IMP] [GO:0016607 "nuclear speck"
evidence=IDA] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016607
GO:GO:0003700 GO:GO:0006351 GO:GO:0003690 GO:GO:0009585
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AB010073 HSSP:P22415
GO:GO:0009704 EMBL:AF488604 EMBL:BX831447 EMBL:AY568656
EMBL:AJ630484 EMBL:AK220640 IPI:IPI00537261 IPI:IPI00656604
RefSeq:NP_001032117.1 RefSeq:NP_200935.2 UniGene:At.29114
ProteinModelPortal:Q570R7 SMR:Q570R7 IntAct:Q570R7 STRING:Q570R7
EnsemblPlants:AT5G61270.1 GeneID:836248 KEGG:ath:AT5G61270
TAIR:At5g61270 eggNOG:NOG286182 HOGENOM:HOG000097081
InParanoid:Q9FLK6 OMA:HNESERR PhylomeDB:Q570R7
ProtClustDB:CLSN2681114 Genevestigator:Q570R7 Uniprot:Q570R7
Length = 366
Score = 116 (45.9 bits), Expect = 0.00053, P = 0.00053
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 307 RAKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQV 366
R R A H S ER RR RI++RMR LQ L P K + +LD +EH+K LQ QV
Sbjct: 163 RRGRAAAIHNES--ERRRRDRINQRMRTLQKLLPTASK-ADKVSILDDVIEHLKQLQAQV 219
Query: 367 KLLT 370
+ ++
Sbjct: 220 QFMS 223
>TAIR|locus:2062235 [details] [associations]
symbol:NAI1 "AT2G22770" species:3702 "Arabidopsis
thaliana" [GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP;TAS]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
GO:GO:0005634 EMBL:AC005617 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 Gene3D:4.10.280.10
SUPFAM:SSF47459 HOGENOM:HOG000240300 ProtClustDB:CLSN2690866
EMBL:AF488564 EMBL:AK176248 IPI:IPI00531737 PIR:F84616
RefSeq:NP_850031.2 UniGene:At.43434 ProteinModelPortal:Q8S3F1
SMR:Q8S3F1 STRING:Q8S3F1 PRIDE:Q8S3F1 EnsemblPlants:AT2G22770.1
GeneID:816807 KEGG:ath:AT2G22770 TAIR:At2g22770 eggNOG:NOG310015
InParanoid:Q8S3F1 OMA:TDEYLID PhylomeDB:Q8S3F1
Genevestigator:Q8S3F1 Uniprot:Q8S3F1
Length = 320
Score = 115 (45.5 bits), Expect = 0.00054, P = 0.00054
Identities = 46/165 (27%), Positives = 79/165 (47%)
Query: 225 LINRVNLSPGDPWDDASFSGVKR-ARDSTCNMSFGLDAYETQNGNSGNQST--RLVHHLS 281
+ N +PG + S +G + A T M + T + S + S+ R +S
Sbjct: 27 ICGETNTNPGS--ESGSGTGFELLAERPTKQMKTNNNMNSTSSSPSSSSSSGSRTSQVIS 84
Query: 282 LPKTSAEMAAVEKFLHF--QGSVPCKIRAKR-GCATH-----PRSI-----AERVRRTRI 328
+ VE L+F Q S+ K+ +KR C + P + AER RR ++
Sbjct: 85 FGSPDTKTNPVETSLNFSNQVSMDQKVGSKRKDCVNNGGRREPHLLKEHVLAERKRRQKL 144
Query: 329 SERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKLLTDNK 373
+ER+ L L P + K+T+ A +L+ A++H+K LQ++VK L + +
Sbjct: 145 NERLIALSALLPGL-KKTDKATVLEDAIKHLKQLQERVKKLEEER 188
>UNIPROTKB|Q5MP56 [details] [associations]
symbol:BA1 "Uncharacterized protein" species:4577 "Zea
mays" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888 SMART:SM00353
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AY683001 EMBL:AY683002
EMBL:BT062649 RefSeq:NP_001105271.1 UniGene:Zm.18382 IntAct:Q5MP56
GeneID:542186 KEGG:zma:542186 HOGENOM:HOG000238432 OMA:MLEQAIH
Uniprot:Q5MP56
Length = 219
Score = 110 (43.8 bits), Expect = 0.00079, P = 0.00079
Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 313 ATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVKL 368
+T P+S+A R RR RIS+R R L+ L P K +T ML+ A+ ++K L+ Q+ L
Sbjct: 53 STDPQSVAARERRHRISDRFRVLRSLVPGGSKM-DTVSMLEQAIHYVKFLKTQISL 107
>TAIR|locus:2117773 [details] [associations]
symbol:AT4G28790 species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] InterPro:IPR011598 Pfam:PF00010 PROSITE:PS50888
SMART:SM00353 GO:GO:0005634 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003677 GO:GO:0003700 GO:GO:0006351 EMBL:AL161573
Gene3D:4.10.280.10 SUPFAM:SSF47459 EMBL:AL035353 EMBL:BT015828
EMBL:BT020214 IPI:IPI00521625 IPI:IPI00529771 IPI:IPI00915578
PIR:T04520 RefSeq:NP_194608.3 RefSeq:NP_974634.1 UniGene:At.31988
ProteinModelPortal:Q9SVU6 SMR:Q9SVU6 PRIDE:Q9SVU6
EnsemblPlants:AT4G28790.1 GeneID:829000 KEGG:ath:AT4G28790
TAIR:At4g28790 HOGENOM:HOG000240264 InParanoid:Q9SVU6
PhylomeDB:Q9SVU6 ProtClustDB:CLSN2680993 Genevestigator:Q9SVU6
Uniprot:Q9SVU6
Length = 413
Score = 115 (45.5 bits), Expect = 0.00085, P = 0.00085
Identities = 24/63 (38%), Positives = 40/63 (63%)
Query: 308 AKRGCATHPRSIAERVRRTRISERMRKLQDLFPNMDKQTNTAEMLDLAVEHIKDLQKQVK 367
+KR A ++ER RR +I+E M+ LQ+L P K T+ + MLD +E++K LQ Q++
Sbjct: 273 SKRSRAAIMHKLSERRRRQKINEMMKALQELLPRCTK-TDRSSMLDDVIEYVKSLQSQIQ 331
Query: 368 LLT 370
+ +
Sbjct: 332 MFS 334
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.313 0.128 0.372 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 385 385 0.00092 117 3 11 23 0.45 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 83
No. of states in DFA: 605 (64 KB)
Total size of DFA: 239 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 38.51u 0.12s 38.63t Elapsed: 00:00:01
Total cpu time: 38.51u 0.12s 38.63t Elapsed: 00:00:02
Start: Mon May 20 18:23:58 2013 End: Mon May 20 18:24:00 2013