Query 016641
Match_columns 385
No_of_seqs 367 out of 2614
Neff 8.1
Searched_HMMs 29240
Date Mon Mar 25 17:00:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016641.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016641hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4fln_A Protease DO-like 2, chl 100.0 4E-53 1.4E-57 429.7 28.7 267 111-378 45-314 (539)
2 3stj_A Protease DEGQ; serine p 100.0 3.8E-48 1.3E-52 376.9 27.4 272 103-383 13-306 (345)
3 4a8c_A Periplasmic PH-dependen 100.0 1.5E-46 5E-51 376.9 32.2 273 102-383 12-306 (436)
4 3pv2_A DEGQ; trypsin fold, PDZ 100.0 1.8E-46 6.2E-51 377.2 25.6 276 100-383 16-325 (451)
5 1te0_A Protease DEGS; two doma 100.0 6E-46 2E-50 358.2 25.0 270 101-383 7-287 (318)
6 1lcy_A HTRA2 serine protease; 100.0 8.1E-45 2.8E-49 351.2 22.8 266 103-382 15-298 (325)
7 1ky9_A Protease DO, DEGP, HTRA 100.0 2.1E-44 7.3E-49 361.9 24.6 272 103-383 13-329 (448)
8 3qo6_A Protease DO-like 1, chl 100.0 1.7E-44 5.8E-49 352.2 22.3 269 102-383 16-305 (348)
9 1y8t_A Hypothetical protein RV 100.0 1.3E-42 4.4E-47 335.8 27.4 251 103-383 6-285 (324)
10 3num_A Serine protease HTRA1; 100.0 1E-43 3.4E-48 344.7 18.3 268 101-382 12-296 (332)
11 3sti_A Protease DEGQ; serine p 100.0 1.7E-35 5.8E-40 274.4 17.1 206 102-313 12-238 (245)
12 1l1j_A Heat shock protease HTR 100.0 1.4E-35 5E-40 274.2 15.8 213 103-320 4-239 (239)
13 3lgi_A Protease DEGS; stress-s 100.0 1.2E-33 4E-38 261.2 21.1 206 101-317 18-233 (237)
14 3tjo_A Serine protease HTRA1; 100.0 1.5E-32 5.2E-37 252.8 18.4 196 101-308 29-230 (231)
15 3k6y_A Serine protease, possib 100.0 7.2E-30 2.5E-34 235.7 18.0 189 106-311 34-229 (237)
16 2as9_A Serine protease; trypsi 99.9 1.8E-24 6.1E-29 195.9 13.8 179 113-307 2-202 (210)
17 2w5e_A Putative serine proteas 99.9 7E-23 2.4E-27 177.8 16.5 137 138-296 19-156 (163)
18 2w7s_A Serine protease SPLA; h 99.9 1.8E-22 6.3E-27 180.9 10.8 168 127-305 10-196 (200)
19 1agj_A Epidermolytic toxin A; 99.9 7.2E-22 2.5E-26 182.5 14.1 158 140-306 55-240 (242)
20 2vid_A Serine protease SPLB; h 99.9 4E-21 1.4E-25 172.4 13.8 169 127-306 10-201 (204)
21 2o8l_A V8 protease, taphylococ 99.8 4.4E-20 1.5E-24 173.8 19.5 157 140-307 34-210 (274)
22 1wcz_A Glutamyl endopeptidase; 99.8 6E-20 2E-24 172.3 17.7 158 139-307 33-210 (268)
23 2h5c_A Alpha-lytic protease; s 99.8 3.5E-19 1.2E-23 159.5 16.4 152 142-303 18-191 (198)
24 1qtf_A Exfoliative toxin B; se 99.8 3.3E-20 1.1E-24 171.9 6.1 144 139-299 47-215 (246)
25 2qa9_E Streptogrisin-B; chymot 99.8 2.9E-18 9.9E-23 151.9 15.2 158 140-304 12-181 (185)
26 2oua_A Serine protease, protei 99.8 1.3E-17 4.3E-22 148.2 17.8 151 141-302 15-181 (188)
27 1hpg_A Glutamic acid specific 99.8 4.8E-18 1.7E-22 150.9 15.1 153 141-303 13-182 (187)
28 2ea3_A Chymotrypsin; celloulom 99.7 2.3E-17 8E-22 146.5 15.5 149 141-303 16-176 (189)
29 2pfe_A Protease A, alkaline se 99.7 8.8E-17 3E-21 142.4 13.9 150 140-302 14-178 (186)
30 2sga_A Proteinase A; hydrolase 99.7 5.7E-17 2E-21 143.0 11.9 150 140-303 12-176 (181)
31 1fxy_A Coagulation factor XA-t 99.7 1.2E-15 4.1E-20 139.3 18.4 170 139-308 24-225 (228)
32 1hj8_A Trypsin I; hydrolase, r 99.7 2.1E-15 7.4E-20 137.1 18.9 169 140-308 23-220 (222)
33 4i8h_A Cationic trypsin, beta- 99.7 2.7E-15 9.4E-20 136.1 19.2 169 140-308 23-221 (223)
34 1ton_A Tonin; hydrolase(serine 99.7 3.8E-15 1.3E-19 136.4 20.2 167 140-308 22-232 (235)
35 2zch_P Prostate-specific antig 99.7 2.1E-15 7.3E-20 138.3 17.9 170 139-308 23-234 (237)
36 1cgh_A Cathepsin G; inflammati 99.7 3E-15 1E-19 136.3 17.7 167 140-308 27-223 (224)
37 2bdg_A Kallikrein-4; serine pr 99.7 4.8E-15 1.6E-19 134.9 18.3 169 139-307 23-221 (223)
38 3mfj_A Cationic trypsin; serin 99.7 6.5E-15 2.2E-19 134.0 19.0 167 140-308 23-221 (223)
39 1npm_A Neuropsin; serine prote 99.6 3.3E-15 1.1E-19 136.0 17.0 167 140-306 24-223 (225)
40 1ao5_A Glandular kallikrein-13 99.6 5.2E-15 1.8E-19 135.7 18.2 168 139-308 23-234 (237)
41 1iau_A Granzyme B; hydrolase-h 99.6 4E-15 1.4E-19 135.6 17.0 167 140-308 27-225 (227)
42 1mbm_A NSP4 proteinase, chymot 99.6 2.6E-16 8.7E-21 135.6 8.2 125 112-282 2-130 (198)
43 2psx_A Kallikrein-5; zinc inhi 99.6 5.4E-15 1.8E-19 134.8 17.6 170 139-308 24-224 (227)
44 1sgf_A 7S NGF, nerve growth fa 99.6 5E-15 1.7E-19 136.1 17.3 169 140-308 27-237 (240)
45 3s9c_A Vipera russelli protein 99.6 9.5E-15 3.2E-19 133.4 18.9 171 140-310 26-227 (234)
46 1lo6_A Kallikrein 6, HK6; seri 99.6 8E-15 2.7E-19 133.4 18.3 168 140-307 24-220 (223)
47 1fuj_A PR3, myeloblastin; hydr 99.6 7.1E-15 2.4E-19 133.3 17.4 166 139-307 26-220 (221)
48 1gvz_A Kallikrein-1E2; antigen 99.6 3.8E-15 1.3E-19 136.6 15.6 169 140-308 24-234 (237)
49 2qxi_A Kallikrein-7; S1 pocket 99.6 6E-15 2E-19 134.3 16.8 166 141-308 25-221 (224)
50 1mza_A Pro-granzyme K; apoptos 99.6 1E-14 3.5E-19 133.9 18.5 169 139-307 25-234 (240)
51 1aut_C Activated protein C; se 99.6 9.5E-15 3.2E-19 135.1 18.2 170 139-308 24-239 (250)
52 2aiq_A Protein C activator; sn 99.6 1.1E-14 3.6E-19 133.2 18.3 169 140-309 23-223 (231)
53 1pq7_A Trypsin; ultra-high res 99.6 5.7E-15 2E-19 134.3 16.4 166 140-305 24-222 (224)
54 2l97_A HTRA, putative serine p 99.6 2.7E-17 9.3E-22 138.1 0.8 94 288-383 2-99 (134)
55 1azz_A Collagenase; complex (s 99.6 6E-15 2E-19 134.5 16.3 167 140-307 24-222 (226)
56 4ag1_A Chymase; hydrolase-de n 99.6 1.3E-14 4.4E-19 131.9 18.4 167 139-308 27-224 (226)
57 4e7n_A Snake-venom thrombin-li 99.6 4.1E-14 1.4E-18 129.4 21.8 171 139-309 25-230 (238)
58 3s69_A Thrombin-like enzyme de 99.6 1.5E-14 5E-19 132.1 18.7 170 140-309 24-226 (234)
59 1a7s_A Heparin binding protein 99.6 1.6E-14 5.6E-19 131.3 18.8 166 140-310 24-220 (225)
60 1spj_A Kallikrein 1; serine pr 99.6 1.4E-14 5E-19 132.7 18.5 169 140-308 24-235 (238)
61 1eq9_A Chymotrypsin; FIRE ANT, 99.6 2E-14 6.7E-19 130.6 17.9 165 140-306 24-219 (222)
62 3rp2_A RAT MAST cell protease 99.6 5.7E-14 1.9E-18 127.4 20.7 166 139-307 27-223 (224)
63 2z7f_E Leukocyte elastase; ser 99.6 9.3E-15 3.2E-19 132.3 15.1 162 140-307 24-217 (218)
64 2xw9_A Complement factor D; im 99.6 2.3E-14 7.8E-19 130.5 17.7 168 140-307 24-227 (228)
65 1euf_A Duodenase; serine prote 99.6 1.1E-14 3.7E-19 132.8 15.4 167 139-307 26-223 (227)
66 3h7t_A Group 3 allergen smipp- 99.6 5.8E-14 2E-18 128.0 19.7 169 140-308 24-229 (235)
67 3fzz_A Granzyme C; hydrolase, 99.6 1.2E-13 4.2E-18 125.4 21.5 168 139-308 27-226 (227)
68 1orf_A Granzyme A; hydrolase-h 99.6 5E-14 1.7E-18 128.9 18.5 168 139-307 23-230 (234)
69 3gov_B MAsp-1; complement, ser 99.6 6.8E-14 2.3E-18 128.8 19.3 168 140-307 25-247 (251)
70 1bru_P Elastase, PPE; serine p 99.6 7.3E-14 2.5E-18 128.4 19.3 169 140-308 28-239 (241)
71 1gvk_B Elastase 1, peptide inh 99.6 5.4E-14 1.8E-18 129.2 18.3 169 140-308 28-238 (240)
72 2zgc_A Granzyme M; serine prot 99.6 6.4E-14 2.2E-18 128.9 18.3 169 140-308 24-229 (240)
73 1t8o_A Chymotrypsin A; chymotr 99.6 8.1E-14 2.8E-18 128.5 19.0 168 140-308 40-243 (245)
74 1si5_H Scatter factor, hepatoc 99.6 3.5E-13 1.2E-17 123.7 23.2 170 140-309 23-228 (240)
75 2f91_A Hepatopancreas trypsin; 99.6 7.5E-14 2.6E-18 128.0 18.6 166 141-306 29-235 (237)
76 2asu_B Hepatocyte growth facto 99.6 1.5E-13 5.1E-18 125.8 20.3 170 139-308 21-226 (234)
77 2qy0_B Complement C1R subcompo 99.6 2.1E-14 7E-19 131.9 14.4 181 127-307 9-238 (242)
78 1p3c_A Glutamyl-endopeptidase; 99.6 1.5E-14 5.2E-19 130.6 13.0 156 140-306 30-212 (215)
79 2jkh_A Activated factor XA hea 99.6 5.6E-14 1.9E-18 129.1 16.8 170 139-308 24-233 (241)
80 2hlc_A Collagenase; serine pro 99.6 4.9E-14 1.7E-18 128.5 16.0 169 139-307 27-226 (230)
81 1elt_A Elastase; serine protei 99.6 7.6E-14 2.6E-18 127.8 17.2 166 140-305 28-234 (236)
82 2bdy_A Thrombin; thrombin, com 99.6 1E-13 3.5E-18 131.0 18.4 191 118-308 30-285 (289)
83 3tvj_B Mannan-binding lectin s 99.6 8.1E-14 2.8E-18 127.6 17.1 180 129-308 11-240 (242)
84 1ym0_A Fibrinotic enzyme compo 99.6 9.2E-14 3.1E-18 127.2 17.1 169 140-308 26-236 (238)
85 3ncl_A Suppressor of tumorigen 99.6 4.8E-13 1.6E-17 122.5 21.6 168 140-307 25-239 (241)
86 3bg8_A Coagulation factor XIA 99.6 1.6E-13 5.4E-18 125.9 18.4 169 139-307 26-235 (238)
87 3h7o_A Group 3 allergen smipp- 99.6 1.1E-13 3.8E-18 125.6 17.1 168 141-308 27-226 (228)
88 2any_A Kininogenin, plasma kal 99.5 1.8E-13 6.1E-18 125.7 18.0 169 140-308 27-236 (241)
89 2wph_S Coagulation factor IXA 99.5 2.2E-13 7.5E-18 124.6 18.4 168 140-307 24-232 (235)
90 1ddj_A Plasminogen; catalytic 99.5 1.8E-13 6.2E-18 126.2 18.0 169 140-308 42-245 (247)
91 1m9u_A Earthworm fibrinolytic 99.5 1E-13 3.4E-18 127.3 16.0 166 140-305 27-239 (241)
92 3gyl_B Prostasin; ENAC, zymoge 99.5 2.6E-13 9E-18 125.7 19.0 169 140-308 24-242 (261)
93 3beu_A Trypsin, SGT; beta shee 99.5 3.2E-13 1.1E-17 122.5 19.0 176 127-307 9-221 (224)
94 3rm2_H Thrombin heavy chain; s 99.5 1.6E-13 5.4E-18 126.9 17.0 169 140-308 26-255 (259)
95 2bz6_H Blood coagulation facto 99.5 2.2E-13 7.4E-18 126.1 17.6 169 140-308 24-240 (254)
96 2oq5_A Transmembrane protease, 99.5 5.3E-13 1.8E-17 121.8 19.8 168 140-307 24-230 (232)
97 2olg_A Pro-phenoloxidase activ 99.5 2.7E-13 9.1E-18 127.3 18.1 167 139-305 50-274 (278)
98 1rtf_B (TC)-T-PA, two chain ti 99.5 4.9E-13 1.7E-17 123.4 19.5 168 139-306 29-249 (252)
99 1md8_A C1R complement serine p 99.5 1.2E-13 4E-18 133.2 15.7 190 118-307 89-327 (329)
100 1pyt_D TC, PCPA-TC, chymotryps 99.5 1.6E-13 5.4E-18 126.9 15.9 167 140-306 41-248 (251)
101 2r0l_A Hepatocyte growth facto 99.5 3.6E-13 1.2E-17 124.1 18.2 169 140-308 23-239 (248)
102 2f9n_A Alpha I tryptase; serin 99.5 1.6E-13 5.6E-18 126.2 15.5 168 140-307 27-241 (245)
103 4dgj_A Enteropeptidase catalyt 99.5 2.1E-13 7.3E-18 124.4 15.5 168 139-306 23-233 (235)
104 4f4o_C Haptoglobin; globin fol 99.5 1.8E-13 6.3E-18 132.7 15.8 191 117-308 101-345 (347)
105 1fiw_A Beta-acrosin heavy chai 99.5 7E-13 2.4E-17 125.4 19.2 168 140-307 30-248 (290)
106 1yc0_A Hepatocyte growth facto 99.5 5.3E-13 1.8E-17 125.7 17.9 169 140-308 58-274 (283)
107 1z8g_A Serine protease hepsin; 99.5 8.2E-13 2.8E-17 129.4 19.2 170 139-308 140-360 (372)
108 3mhw_U Urokinase-type plasmino 99.5 2.4E-12 8.1E-17 118.2 21.0 169 139-307 28-245 (247)
109 2jde_A Urokinase-type plasmino 99.5 4.4E-12 1.5E-16 118.7 21.6 168 140-307 52-268 (276)
110 1gpz_A Complement C1R componen 99.5 5.1E-13 1.8E-17 131.8 16.0 190 118-307 157-395 (399)
111 3cp7_A Alkaline serine proteas 99.5 6.7E-13 2.3E-17 120.4 15.4 174 113-306 6-214 (218)
112 1zjk_A Mannan-binding lectin s 99.5 7.3E-13 2.5E-17 131.0 16.5 190 118-307 161-400 (403)
113 1fon_A Procarboxypeptidase A-S 99.5 3.9E-13 1.3E-17 123.3 13.5 169 140-308 26-238 (240)
114 3f1s_B Vitamin K-dependent pro 99.5 1.3E-12 4.4E-17 123.1 17.0 185 110-308 61-276 (283)
115 1elv_A Complement C1S componen 99.4 1E-12 3.4E-17 126.7 15.3 188 119-308 83-325 (333)
116 3nxp_A Prethrombin-1; alloster 99.4 5.1E-13 1.8E-17 133.0 12.9 191 118-308 165-420 (424)
117 3h5c_B Vitamin K-dependent pro 99.4 3E-12 1E-16 122.4 17.6 169 139-307 117-316 (317)
118 3fan_A Non-structural protein; 99.4 2.6E-13 8.8E-18 118.9 9.1 117 138-284 28-146 (213)
119 2b9l_A Prophenoloxidase activa 99.4 2.1E-12 7.2E-17 127.3 16.7 192 118-309 129-384 (394)
120 2vnt_A Urokinase-type plasmino 99.4 1.5E-11 5.2E-16 114.8 20.6 187 112-308 34-269 (276)
121 2xxl_A GRAM-positive specific 99.4 4.3E-12 1.5E-16 125.7 17.5 190 119-308 119-373 (408)
122 4dur_A Plasminogen, serine pro 99.3 1E-11 3.4E-16 132.1 16.0 190 119-308 562-789 (791)
123 2f83_A Coagulation factor XI; 99.3 8.6E-12 2.9E-16 130.0 13.7 168 139-306 413-621 (625)
124 3hrz_D Complement factor B; se 99.3 2.2E-11 7.4E-16 129.3 14.9 185 125-309 463-733 (741)
125 1rrk_A Complement factor B; BB 99.3 1.4E-11 4.8E-16 124.7 11.9 171 139-309 241-491 (497)
126 2pzd_A Serine protease HTRA2; 99.2 7.6E-12 2.6E-16 101.4 6.3 71 310-382 1-77 (113)
127 1zyo_A Serine protease; beta-b 99.2 8.9E-11 3.1E-15 103.6 13.3 162 112-302 14-185 (191)
128 2xrc_A Human complement factor 99.2 1.1E-10 3.9E-15 120.2 15.3 189 118-307 321-555 (565)
129 2odp_A Complement C2; C3/C5 co 99.2 2E-11 6.8E-16 124.1 9.1 180 129-308 234-501 (509)
130 2p3w_A Probable serine proteas 99.2 1.4E-11 4.9E-16 99.6 6.4 71 310-382 1-77 (112)
131 1arb_A Achromobacter protease 99.2 3.2E-10 1.1E-14 105.8 14.6 143 111-284 20-213 (268)
132 1yph_C Chymotrypsin A, chain B 99.0 3E-09 1E-13 88.2 10.7 86 139-225 24-128 (131)
133 2pka_B Kallikrein A; serine pr 98.9 1.1E-08 3.7E-13 87.1 13.5 124 185-308 6-149 (152)
134 2vz5_A TAX1-binding protein 3; 98.9 1.2E-09 4.2E-14 91.8 4.2 73 309-382 32-108 (139)
135 3sfj_A TAX1-binding protein 3; 98.8 9.1E-09 3.1E-13 81.7 6.3 68 315-382 18-89 (104)
136 2eaq_A LIM domain only protein 98.7 1.2E-08 4.2E-13 78.6 5.9 42 341-382 28-72 (90)
137 3mmg_A Nuclear inclusion prote 98.7 9.3E-07 3.2E-11 79.6 17.9 167 111-305 13-193 (241)
138 2fcf_A Multiple PDZ domain pro 98.7 1.6E-08 5.3E-13 80.1 5.6 66 315-382 15-84 (103)
139 2i4s_A General secretion pathw 98.7 1.1E-08 3.8E-13 81.5 4.1 74 297-382 5-79 (105)
140 2rcz_A Tight junction protein 98.7 1.2E-08 4E-13 76.9 3.8 62 319-382 1-66 (81)
141 1uit_A Human discs large 5 pro 98.6 8.2E-09 2.8E-13 83.9 2.6 69 308-382 8-84 (117)
142 2iwq_A Multiple PDZ domain pro 98.6 4E-08 1.4E-12 80.7 6.1 66 315-382 35-104 (123)
143 3kzd_A TIAM-1, T-lymphoma inva 98.6 9.9E-08 3.4E-12 74.3 6.3 57 316-382 20-79 (94)
144 2eeh_A PDZ domain-containing p 98.5 6.3E-08 2.1E-12 76.3 5.0 51 315-376 21-72 (100)
145 2vsp_A PDZ domain-containing p 98.5 5.5E-08 1.9E-12 75.2 4.6 42 341-382 27-71 (91)
146 2e7k_A Maguk P55 subfamily mem 98.5 1.2E-07 4.2E-12 73.4 6.2 53 316-382 18-73 (91)
147 2ego_A General receptor for ph 98.5 8.9E-08 3E-12 74.8 5.4 42 341-382 37-81 (96)
148 2jxo_A Ezrin-radixin-moesin-bi 98.5 1.3E-07 4.4E-12 74.1 6.1 42 341-382 33-77 (98)
149 1wi2_A Riken cDNA 2700099C19; 98.5 1.6E-07 5.5E-12 74.5 6.4 56 316-382 27-85 (104)
150 2pa1_A PDZ and LIM domain prot 98.5 1.4E-07 4.7E-12 72.2 5.6 42 341-382 26-70 (87)
151 2he4_A Na(+)/H(+) exchange reg 98.5 1.5E-07 5.2E-12 72.5 5.9 42 341-382 28-72 (90)
152 1w9e_A Syntenin 1; cell adhesi 98.5 1.2E-07 4E-12 81.8 5.3 54 315-382 15-70 (166)
153 2pkt_A PDZ and LIM domain prot 98.5 1.5E-07 5.1E-12 72.6 5.3 42 341-382 27-71 (91)
154 3i18_A LMO2051 protein; alpha- 98.5 1.5E-07 5.2E-12 74.2 5.3 44 340-383 6-49 (100)
155 1wh1_A KIAA1095 protein; PDZ d 98.5 1.5E-07 5.2E-12 77.2 5.3 58 316-382 32-91 (124)
156 3cyy_A Tight junction protein 98.4 9.7E-08 3.3E-12 73.8 3.7 54 328-382 11-68 (92)
157 2vsv_A Rhophilin-2; scaffold p 98.4 2.5E-07 8.6E-12 74.2 6.1 42 341-382 44-88 (109)
158 2w4f_A Protein LAP4; structura 98.4 2.5E-07 8.7E-12 72.1 5.6 62 315-381 13-75 (97)
159 2kjp_A Uncharacterized protein 98.4 5.4E-08 1.9E-12 75.5 1.6 43 341-383 1-43 (91)
160 2i6v_A General secretion pathw 98.4 1.6E-07 5.5E-12 72.0 4.1 42 341-382 19-61 (87)
161 2f5y_A Regulator of G-protein 98.4 3.5E-07 1.2E-11 70.6 6.0 42 341-382 24-68 (91)
162 2v90_A PDZ domain-containing p 98.4 2.4E-07 8.3E-12 72.2 5.1 43 340-382 29-74 (96)
163 2kv8_A RGS12, regulator of G-p 98.4 1.8E-07 6.2E-12 70.9 3.9 42 341-382 23-67 (83)
164 1vb7_A PDZ and LIM domain 2; P 98.4 1.8E-07 6E-12 72.8 3.9 42 341-382 30-74 (94)
165 2uzc_A Human pdlim5, PDZ and L 98.4 3.4E-07 1.2E-11 70.1 5.5 42 341-382 27-71 (88)
166 2z17_A Pleckstrin homology SEC 98.4 1.4E-07 4.8E-12 74.8 3.3 43 340-382 47-92 (104)
167 3qik_A Phosphatidylinositol 3, 98.4 2.2E-07 7.6E-12 73.0 4.4 42 341-382 39-83 (101)
168 3r68_A Na(+)/H(+) exchange reg 98.4 2.6E-07 9E-12 71.8 4.8 42 341-382 29-73 (95)
169 2kl1_A YLBL protein; structure 98.4 1.6E-07 5.6E-12 73.2 3.6 44 340-383 4-47 (94)
170 1g9o_A NHE-RF; PDZ domain, com 98.4 4.7E-07 1.6E-11 69.8 6.0 42 341-382 27-71 (91)
171 2dls_A PDZ-rhogef, RHO guanine 98.4 3.3E-07 1.1E-11 71.1 4.9 38 341-378 29-67 (93)
172 1rgw_A ZAsp protein; PDZ, cyph 98.4 3E-07 1E-11 69.9 4.6 41 341-381 25-68 (85)
173 3ngh_A PDZ domain-containing p 98.4 4.1E-07 1.4E-11 72.3 5.4 42 341-382 26-70 (106)
174 3id1_A Regulator of sigma E pr 98.4 3.7E-07 1.3E-11 71.3 5.0 41 343-383 4-45 (95)
175 3khf_A Microtubule-associated 98.4 4.7E-07 1.6E-11 71.0 5.6 42 341-382 34-78 (99)
176 1y7n_A Amyloid beta A4 precurs 98.3 3.1E-07 1E-11 71.0 4.3 49 332-382 24-75 (90)
177 1va8_A Maguk P55 subfamily mem 98.3 5.9E-07 2E-11 72.4 6.2 42 341-382 48-93 (113)
178 1vae_A Rhophilin 2, rhophilin, 98.3 4E-07 1.4E-11 73.2 5.2 42 341-382 36-80 (111)
179 1x5q_A LAP4 protein; PDZ domai 98.3 5.2E-07 1.8E-11 72.2 5.8 42 340-381 45-87 (110)
180 3tsv_A Tight junction protein 98.3 4.2E-07 1.4E-11 74.6 5.2 42 341-382 51-95 (124)
181 1m5z_A GRIP, AMPA receptor int 98.3 5E-07 1.7E-11 69.6 5.2 39 341-379 32-71 (91)
182 1nf3_C PAR-6B; semi-CRIB motif 98.3 1.8E-07 6.3E-12 77.2 2.9 63 318-382 44-110 (128)
183 2q3g_A PDZ and LIM domain prot 98.3 5.5E-07 1.9E-11 69.1 5.4 41 341-381 27-70 (89)
184 2ejy_A 55 kDa erythrocyte memb 98.3 5E-07 1.7E-11 70.9 5.2 42 341-382 36-81 (97)
185 1q3o_A Shank1; PDZ, GKAP, pept 98.3 6.3E-07 2.1E-11 71.6 5.8 42 341-382 45-89 (109)
186 1whd_A RGS3, regulator of G-pr 98.3 4.4E-07 1.5E-11 71.4 4.8 42 341-382 36-80 (100)
187 1kwa_A Hcask/LIN-2 protein; PD 98.3 6.5E-07 2.2E-11 68.7 5.4 42 341-382 25-70 (88)
188 1lvm_A Catalytic domain of the 98.3 2.5E-05 8.5E-10 69.8 16.3 171 110-307 20-202 (229)
189 1v5l_A PDZ and LIM domain 3; a 98.3 2.9E-07 9.9E-12 72.9 3.4 57 315-382 14-73 (103)
190 2hga_A Conserved protein MTH13 98.3 7.7E-07 2.6E-11 73.1 5.9 44 340-383 24-67 (125)
191 2d90_A PDZ domain containing p 98.3 5.4E-07 1.8E-11 71.1 4.4 42 341-382 30-74 (102)
192 2o2t_A Multiple PDZ domain pro 98.3 1.7E-06 5.7E-11 70.0 7.3 80 295-382 4-95 (117)
193 2zpm_A Regulator of sigma E pr 98.3 5.6E-07 1.9E-11 69.3 4.1 42 342-383 5-47 (91)
194 2h2b_A Tight junction protein 98.3 8.3E-07 2.9E-11 70.6 5.3 42 340-382 38-80 (107)
195 2edz_A PDZ domain-containing p 98.3 5.8E-07 2E-11 72.5 4.3 43 340-382 37-82 (114)
196 2eeg_A PDZ and LIM domain prot 98.3 8.5E-07 2.9E-11 68.9 5.0 35 341-375 32-67 (94)
197 2jil_A GRIP1 protein, glutamat 98.3 1E-06 3.6E-11 68.6 5.4 42 341-382 32-77 (97)
198 1uez_A KIAA1526 protein; PDZ d 98.2 7.4E-07 2.5E-11 70.1 4.5 39 341-379 35-74 (101)
199 2vwr_A Ligand of NUMB protein 98.2 1.3E-06 4.5E-11 67.8 5.8 37 341-377 29-67 (95)
200 2q9v_A Membrane-associated gua 98.2 1.6E-06 5.4E-11 66.6 6.2 42 341-382 27-72 (90)
201 2i04_A Membrane-associated gua 98.2 1.5E-06 5E-11 66.0 5.9 42 341-382 25-70 (85)
202 2yub_A LIMK-2, LIM domain kina 98.2 6.5E-07 2.2E-11 72.8 4.1 44 340-383 43-91 (118)
203 2kjd_A Sodium/hydrogen exchang 98.2 1.3E-06 4.6E-11 71.7 6.1 42 341-382 33-77 (128)
204 3rle_A Golgi reassembly-stacki 98.2 5.7E-07 2E-11 80.6 3.9 59 315-382 94-154 (209)
205 3qzr_A 3C protein; chymotrypsi 98.2 0.00025 8.5E-09 61.7 20.3 162 109-297 12-179 (187)
206 1ihj_A INAD; intermolecular di 98.2 1.2E-06 4.1E-11 68.4 5.2 42 341-382 37-82 (98)
207 2la8_A Inactivation-NO-after-p 98.2 8.9E-07 3E-11 70.6 4.5 38 341-378 25-64 (106)
208 3bpu_A Membrane-associated gua 98.2 1.3E-06 4.5E-11 66.8 5.2 40 341-382 27-69 (88)
209 2yt7_A Amyloid beta A4 precurs 98.2 1.1E-06 3.8E-11 69.2 4.9 42 341-382 37-82 (101)
210 3e17_A Tight junction protein 98.2 1.6E-06 5.6E-11 66.5 5.7 49 333-382 14-66 (88)
211 3cbz_A Dishevelled-2; PDZ doma 98.2 1.8E-06 6E-11 69.0 5.8 43 340-382 32-78 (108)
212 1qau_A Neuronal nitric oxide s 98.2 1.9E-06 6.5E-11 69.1 6.0 42 341-382 26-71 (112)
213 3qe1_A Sorting nexin-27, G pro 98.2 2E-06 6.9E-11 68.3 6.0 42 341-382 43-87 (107)
214 2db5_A INAD-like protein; PDZ 98.2 2.7E-06 9.1E-11 70.0 6.8 78 297-382 11-100 (128)
215 4e34_A Golgi-associated PDZ an 98.2 1.8E-06 6.3E-11 65.8 5.1 41 341-381 28-72 (87)
216 2qkv_A Inactivation-NO-after-p 98.2 1.6E-06 5.6E-11 67.6 4.8 38 341-378 31-70 (96)
217 1wf7_A Enigma homologue protei 98.2 1.4E-06 4.7E-11 68.9 4.3 35 341-375 29-64 (103)
218 1d5g_A Human phosphatase HPTP1 98.2 2.8E-06 9.7E-11 66.0 6.1 43 340-382 32-78 (96)
219 2yuy_A RHO GTPase activating p 98.2 6.9E-07 2.4E-11 73.4 2.5 43 340-382 60-105 (126)
220 2lob_A Golgi-associated PDZ an 97.4 2.8E-07 9.6E-12 74.3 0.0 42 341-382 53-98 (112)
221 3o46_A Maguk P55 subfamily mem 98.1 3.1E-06 1.1E-10 65.4 5.9 42 341-382 28-73 (93)
222 2gzv_A PRKCA-binding protein; 98.1 2.9E-06 9.8E-11 68.5 5.9 42 341-382 50-95 (114)
223 2fe5_A Presynaptic protein SAP 98.1 3.3E-06 1.1E-10 65.3 6.0 42 340-381 32-77 (94)
224 2fne_A Multiple PDZ domain pro 98.1 2.7E-06 9.3E-11 69.0 5.6 42 341-382 53-98 (117)
225 1uep_A Membrane associated gua 98.1 2.3E-06 7.9E-11 67.6 5.1 42 341-382 34-79 (103)
226 2qg1_A Multiple PDZ domain pro 98.1 3.1E-06 1.1E-10 65.2 5.7 35 341-375 29-65 (92)
227 1uf1_A KIAA1526 protein; PDZ d 98.1 2.2E-06 7.7E-11 70.4 5.2 37 341-377 46-83 (128)
228 2eei_A PDZ domain-containing p 98.1 1.9E-06 6.6E-11 68.3 4.6 40 341-380 32-74 (106)
229 2jre_A C60-1 PDZ domain peptid 98.1 2.7E-06 9.4E-11 67.6 5.4 43 340-382 43-89 (108)
230 2d8i_A T-cell lymphoma invasio 98.1 1.1E-06 3.9E-11 70.9 3.2 55 318-382 31-88 (114)
231 2i1n_A Discs, large homolog 3; 98.1 3.5E-06 1.2E-10 66.3 6.0 41 340-380 33-77 (102)
232 1ueq_A Membrane associated gua 98.1 3.3E-06 1.1E-10 69.0 5.9 42 341-382 44-89 (123)
233 3q3y_A HEVB EV93 3C protease; 98.1 0.00038 1.3E-08 60.4 19.0 161 110-297 11-177 (191)
234 2opg_A Multiple PDZ domain pro 98.1 3.9E-06 1.3E-10 65.5 5.9 41 341-381 30-74 (98)
235 1mfg_A ERB-B2 interacting prot 98.1 2.8E-06 9.7E-11 65.9 4.9 39 340-378 34-72 (95)
236 2b0f_A Picornain 3C (protease 98.1 0.00015 5.1E-09 63.0 16.2 145 141-297 24-174 (182)
237 2dkr_A LIN-7 homolog B; LIN-7B 98.1 3.5E-06 1.2E-10 65.0 5.4 42 341-382 30-75 (93)
238 2byg_A Channel associated prot 98.1 4.2E-06 1.4E-10 67.8 6.1 43 340-382 53-99 (117)
239 1cqq_A Type 2 rhinovirus 3C pr 98.1 0.00038 1.3E-08 60.5 18.8 147 141-297 24-175 (180)
240 3b76_A E3 ubiquitin-protein li 98.1 4E-06 1.4E-10 68.1 5.7 43 340-382 52-98 (118)
241 1uew_A Membrane associated gua 98.1 2.2E-06 7.5E-11 69.0 4.1 41 342-382 44-88 (114)
242 1n7e_A AMPA receptor interacti 98.1 4.6E-06 1.6E-10 65.0 5.8 42 341-382 30-75 (97)
243 1wha_A KIAA0147 protein, scrib 98.1 2.9E-06 9.8E-11 67.2 4.6 43 340-382 37-83 (105)
244 2jik_A Synaptojanin-2 binding 98.1 5.1E-06 1.7E-10 65.2 5.8 41 340-380 36-80 (101)
245 3zve_A 3C protease; hydrolase, 98.1 0.00031 1.1E-08 61.5 17.7 146 140-296 23-174 (190)
246 3l4f_D SH3 and multiple ankyri 98.1 3.5E-06 1.2E-10 69.8 5.0 41 341-381 65-108 (132)
247 3rle_A Golgi reassembly-stacki 98.1 2.7E-06 9.1E-11 76.2 4.5 43 340-382 15-59 (209)
248 1x5n_A Harmonin; PDZ domain, u 98.1 3.9E-06 1.3E-10 67.5 5.0 37 341-377 41-78 (114)
249 2koj_A Partitioning defective 98.0 5.6E-06 1.9E-10 66.1 5.9 42 341-382 39-84 (111)
250 1qav_A Alpha-1 syntrophin (res 98.0 3.6E-06 1.2E-10 64.6 4.5 35 341-375 30-66 (90)
251 2kom_A Partitioning defective 98.0 5.6E-06 1.9E-10 67.4 5.9 42 341-382 58-103 (121)
252 1v62_A KIAA1719 protein; struc 98.0 4.1E-06 1.4E-10 67.8 5.0 42 341-382 42-87 (117)
253 1v5q_A GRIP1 homolog, glutamat 98.0 4.4E-06 1.5E-10 68.1 5.2 42 341-382 45-90 (122)
254 1q7x_A PDZ2B domain of PTP-BAS 98.0 4.1E-06 1.4E-10 66.6 4.9 42 340-381 41-86 (108)
255 2dmz_A INAD-like protein; PDZ 98.0 3.9E-06 1.3E-10 69.0 4.8 43 340-382 45-91 (129)
256 2djt_A Unnamed protein product 98.0 5.3E-06 1.8E-10 65.5 5.3 40 341-380 38-81 (104)
257 2awx_A Synapse associated prot 98.0 5.4E-06 1.8E-10 65.6 5.3 36 341-376 33-70 (105)
258 1x6d_A Interleukin-16; PDZ dom 98.0 4.3E-06 1.5E-10 67.8 4.8 43 340-382 41-87 (119)
259 2eno_A Synaptojanin-2-binding 98.0 6E-06 2E-10 67.0 5.7 42 340-381 46-91 (120)
260 2dc2_A GOPC, golgi associated 98.0 5.4E-06 1.9E-10 65.5 5.1 41 341-381 35-79 (103)
261 4amh_A Disks large homolog 1; 98.0 8.3E-06 2.8E-10 64.8 6.1 36 340-375 31-68 (106)
262 3axa_A Afadin, nectin-3, prote 98.0 7.6E-06 2.6E-10 64.8 5.8 36 340-375 37-74 (106)
263 2edp_A Fragment, shroom family 98.0 5.3E-06 1.8E-10 65.1 4.8 35 341-375 35-71 (100)
264 2dm8_A INAD-like protein; PDZ 98.0 4.9E-06 1.7E-10 67.1 4.5 42 341-382 43-88 (116)
265 4dcd_A Protease 3C, genome pol 98.0 0.00051 1.7E-08 59.9 17.4 147 140-296 30-181 (190)
266 1wfg_A Regulating synaptic mem 98.0 7.1E-06 2.4E-10 67.8 5.5 42 341-382 65-110 (131)
267 2dlu_A INAD-like protein; PDZ 98.0 5.5E-06 1.9E-10 66.2 4.7 42 341-382 38-83 (111)
268 2hal_A Hepatitis A protease 3C 98.0 0.00039 1.3E-08 62.1 17.1 174 106-297 3-205 (212)
269 1b8q_A Protein (neuronal nitri 98.0 3E-06 1E-10 69.5 3.0 42 341-382 33-78 (127)
270 1um1_A KIAA1849 protein, RSGI 98.0 6E-06 2E-10 65.9 4.7 36 340-375 35-72 (110)
271 1wf8_A Neurabin-I; PDZ domain, 98.0 4.6E-06 1.6E-10 66.2 4.0 38 340-377 39-78 (107)
272 3i4w_A Disks large homolog 4; 98.0 6.2E-06 2.1E-10 65.0 4.7 38 341-378 35-74 (104)
273 1uju_A Scribble; PDZ domain, c 98.0 3.4E-06 1.2E-10 67.5 3.1 43 340-382 43-89 (111)
274 1uhp_A Hypothetical protein KI 98.0 8.1E-06 2.8E-10 64.8 5.3 37 340-376 40-78 (107)
275 1tp5_A Presynaptic density pro 98.0 6.4E-06 2.2E-10 66.7 4.7 40 341-380 38-79 (119)
276 1ujd_A KIAA0559 protein; PDZ d 97.9 1E-05 3.4E-10 65.5 5.7 42 341-382 49-94 (117)
277 2d92_A INAD-like protein; PDZ 97.9 7.3E-06 2.5E-10 65.2 4.8 43 340-382 43-89 (108)
278 2r4h_A Membrane-associated gua 97.9 1.2E-05 4E-10 64.5 6.0 35 341-375 49-85 (112)
279 2kpk_A Membrane-associated gua 97.9 1E-05 3.4E-10 66.7 5.6 42 341-382 43-88 (129)
280 2g5m_B Neurabin-2; spinophilin 97.9 6.5E-06 2.2E-10 66.0 4.2 38 340-377 34-73 (113)
281 1wfv_A Membrane associated gua 97.9 7.2E-06 2.5E-10 64.5 4.4 35 341-375 36-72 (103)
282 1n7t_A 99-MER peptide of densi 97.9 5E-06 1.7E-10 65.5 3.3 38 340-377 42-79 (103)
283 2iwn_A Multiple PDZ domain pro 97.9 1.4E-05 4.8E-10 61.9 5.8 53 316-375 15-69 (97)
284 2iwo_A Multiple PDZ domain pro 97.9 1.3E-05 4.6E-10 65.1 5.6 35 341-375 53-89 (120)
285 1wif_A RSGI RUH-020, riken cDN 97.9 5.4E-06 1.8E-10 68.1 3.2 42 341-382 49-94 (126)
286 3hpk_A Protein interacting wit 97.9 1.5E-05 5.3E-10 65.1 5.9 42 341-382 45-90 (125)
287 2csj_A TJP2 protein; PDZ domai 97.9 8.7E-06 3E-10 65.8 4.3 37 340-377 45-82 (117)
288 2daz_A INAD-like protein; PDZ 97.9 9.6E-06 3.3E-10 66.3 4.6 38 341-378 51-90 (124)
289 1ujv_A Membrane associated gua 97.9 1.4E-05 4.7E-10 62.3 5.2 40 341-382 32-74 (96)
290 2ehr_A INAD-like protein; PDZ 97.9 1E-05 3.6E-10 65.2 4.5 37 340-376 49-87 (117)
291 2edv_A FERM and PDZ domain-con 97.8 4.8E-06 1.7E-10 64.9 2.0 35 341-376 31-66 (96)
292 3nfk_A Tyrosine-protein phosph 97.8 1.5E-05 5.2E-10 63.1 4.9 36 341-376 43-81 (107)
293 1wg6_A Hypothetical protein (r 97.8 1E-05 3.6E-10 66.4 4.1 42 341-382 55-100 (127)
294 3gsl_A Disks large homolog 4; 97.8 1.9E-05 6.5E-10 69.1 5.9 42 341-382 130-175 (196)
295 4fgm_A Aminopeptidase N family 97.8 1.5E-05 5.1E-10 82.3 5.8 43 340-383 495-538 (597)
296 3k1r_A Harmonin; protein-prote 97.8 1.6E-05 5.5E-10 70.0 5.1 42 341-382 110-154 (192)
297 3r0h_A INAD, inactivation-NO-a 97.8 2E-05 6.9E-10 69.8 5.7 41 341-381 136-180 (206)
298 1wi4_A Synip, syntaxin binding 97.8 1.5E-05 5.2E-10 63.6 4.3 42 341-382 41-86 (109)
299 1v6b_A Harmonin isoform A1; st 97.8 2.5E-05 8.4E-10 63.3 5.6 42 341-382 43-88 (118)
300 2krg_A Na(+)/H(+) exchange reg 97.8 1.1E-05 3.6E-10 72.6 3.7 42 341-382 33-77 (216)
301 2cs5_A Tyrosine-protein phosph 97.8 1.4E-05 4.7E-10 64.7 4.0 35 341-375 41-78 (119)
302 3gsl_A Disks large homolog 4; 97.8 2E-05 7E-10 68.9 5.4 42 340-381 34-77 (196)
303 1r6j_A Syntenin 1; PDZ, membra 97.8 2.5E-05 8.7E-10 59.0 5.1 33 344-376 26-59 (82)
304 3pv2_A DEGQ; trypsin fold, PDZ 97.7 2.5E-05 8.6E-10 78.0 5.6 42 341-382 386-428 (451)
305 4fln_A Protease DO-like 2, chl 97.7 3.3E-05 1.1E-09 78.4 6.3 66 316-382 374-457 (539)
306 1um7_A Synapse-associated prot 97.7 1.7E-05 5.8E-10 63.4 3.3 35 341-375 39-75 (113)
307 2qbw_A PDZ-fibronectin fusion 97.7 2.7E-05 9.3E-10 68.4 4.8 38 340-377 23-60 (195)
308 4a8c_A Periplasmic PH-dependen 97.7 3.6E-05 1.2E-09 76.6 5.6 42 341-382 363-405 (436)
309 3egg_C Spinophilin; PP1, serin 97.7 4.7E-05 1.6E-09 65.8 5.7 42 340-381 110-155 (170)
310 2qt5_A Glutamate receptor-inte 97.7 5.3E-05 1.8E-09 66.9 6.0 42 341-382 33-78 (200)
311 2qt5_A Glutamate receptor-inte 97.6 4.9E-05 1.7E-09 67.1 5.6 42 341-382 135-180 (200)
312 1i16_A Interleukin 16, LCF; cy 97.6 1.6E-05 5.6E-10 65.5 2.3 42 341-382 57-102 (130)
313 1ufx_A KIAA1526 protein; PDZ d 97.6 4.7E-05 1.6E-09 60.1 4.7 41 342-382 33-77 (103)
314 3r0h_A INAD, inactivation-NO-a 97.6 5.3E-05 1.8E-09 67.1 5.6 34 341-374 45-80 (206)
315 1p1d_A PDZ45, glutamate recept 97.6 4.4E-05 1.5E-09 67.3 5.0 58 316-382 119-180 (196)
316 1p1d_A PDZ45, glutamate recept 97.6 4.1E-05 1.4E-09 67.5 4.6 42 341-382 36-81 (196)
317 3tsz_A Tight junction protein 97.6 5.4E-05 1.9E-09 74.1 5.5 42 341-382 31-75 (391)
318 2pka_A Kallikrein A; serine pr 97.6 9.9E-05 3.4E-09 55.1 5.4 28 140-167 24-51 (80)
319 3shw_A Tight junction protein 97.5 8.1E-05 2.8E-09 74.3 5.4 42 341-382 23-67 (468)
320 1z87_A Alpha-1-syntrophin; pro 97.5 8.2E-05 2.8E-09 68.7 4.8 35 341-375 103-139 (263)
321 1fc6_A Photosystem II D1 prote 97.4 0.00019 6.6E-09 70.1 6.0 42 341-382 99-143 (388)
322 2bhg_A Foot-and-mouth disease 97.3 0.0056 1.9E-07 54.4 14.7 155 141-307 31-204 (209)
323 3soe_A Membrane-associated gua 97.3 0.00033 1.1E-08 56.1 5.4 40 341-382 34-76 (113)
324 2ijd_1 Picornain 3C, RNA-direc 97.3 0.0077 2.6E-07 62.6 17.1 146 141-297 24-175 (644)
325 3gge_A PDZ domain-containing p 97.2 0.00048 1.6E-08 53.3 5.9 42 341-382 28-73 (95)
326 1ky9_A Protease DO, DEGP, HTRA 97.2 4.7E-05 1.6E-09 75.9 0.0 43 340-382 382-425 (448)
327 3k50_A Putative S41 protease; 97.2 0.00023 7.9E-09 69.8 4.8 38 342-380 91-129 (403)
328 1w9e_A Syntenin 1; cell adhesi 97.0 0.00045 1.5E-08 59.0 4.4 35 342-377 109-144 (166)
329 3suz_A Amyloid beta A4 precurs 96.9 0.00043 1.5E-08 67.6 3.6 42 341-382 232-277 (388)
330 1yph_E Chymotrypsin A, chain C 96.8 0.0024 8.2E-08 49.4 6.0 49 259-307 40-94 (97)
331 2xkx_A Disks large homolog 4; 96.7 0.0013 4.4E-08 69.5 5.5 42 341-382 331-376 (721)
332 2xkx_A Disks large homolog 4; 96.4 0.0029 1E-07 66.7 5.6 36 341-376 89-126 (721)
333 3suz_A Amyloid beta A4 precurs 96.3 0.00063 2.2E-08 66.4 0.0 47 333-381 309-358 (388)
334 4ash_A NS6 protease; hydrolase 95.7 0.18 6.2E-06 41.5 11.7 146 140-295 15-174 (185)
335 1k32_A Tricorn protease; prote 95.5 0.011 3.6E-07 64.8 5.1 41 341-382 748-799 (1045)
336 1wxr_A Haemoglobin protease; h 94.4 0.12 4E-06 55.7 9.3 78 140-224 56-144 (1048)
337 2fyq_A Chymotrypsin-like cyste 94.1 0.33 1.1E-05 40.1 9.3 146 140-295 26-185 (194)
338 2hrv_A 2A cysteine proteinase; 86.0 3.4 0.00012 33.7 8.1 42 250-293 90-131 (142)
339 1vcp_A Semliki forest virus ca 85.8 0.71 2.4E-05 36.5 3.8 28 259-286 94-122 (149)
340 2yew_A Capsid protein, coat pr 85.5 0.71 2.4E-05 40.4 4.0 27 260-286 199-226 (253)
341 4agk_A Capsid protein, coat pr 85.4 0.75 2.6E-05 36.9 3.8 28 259-286 102-130 (158)
342 1svp_A Sindbis virus capsid pr 85.4 0.75 2.6E-05 37.0 3.8 27 260-286 104-131 (161)
343 3e90_B NS3 protease; trypsin-l 85.3 2 6.9E-05 36.6 6.7 132 110-280 20-154 (198)
344 3u1j_B Serine protease NS3; se 85.2 2.3 7.8E-05 36.2 6.9 133 110-281 25-160 (191)
345 2fom_B Polyprotein; flavivirus 84.9 1.7 5.7E-05 36.9 5.9 132 110-280 16-150 (185)
346 1ep5_B Capsid protein C, coat 84.8 0.67 2.3E-05 37.1 3.3 28 258-285 100-128 (157)
347 2ggv_B NS3, non-structural pro 84.6 1.6 5.4E-05 37.0 5.6 134 111-283 16-152 (185)
348 2fp7_B Serine protease NS3; fl 84.4 1.7 5.7E-05 36.5 5.6 115 139-281 19-136 (172)
349 3lkw_A Fusion protein of nonst 83.4 2.5 8.6E-05 37.1 6.6 113 140-280 85-200 (236)
350 1kxf_A Sindbis virus capsid pr 82.5 0.86 2.9E-05 40.2 3.3 26 260-285 209-235 (264)
351 1z8r_A Coxsackievirus B4 polyp 81.9 2.6 9.1E-05 35.1 5.9 129 140-293 20-151 (166)
352 3su6_A NS3 protease, NS4A prot 79.2 1.3 4.4E-05 37.6 3.2 40 260-299 154-196 (203)
353 1i4k_A Putative snRNP SM-like 48.8 51 0.0017 23.4 6.3 60 163-225 15-74 (77)
354 1h64_1 SnRNP SM-like protein; 45.8 39 0.0013 23.9 5.2 33 163-196 15-47 (75)
355 1d3b_B Protein (small nuclear 45.0 35 0.0012 25.2 5.1 33 163-196 15-47 (91)
356 4hcz_A PHD finger protein 1; p 45.0 70 0.0024 21.7 6.6 38 159-197 4-41 (58)
357 1th7_A SnRNP-2, small nuclear 42.2 72 0.0025 22.9 6.3 33 163-196 20-52 (81)
358 3sze_A Serine protease ESPP; p 42.2 2.7E+02 0.0092 29.8 12.7 54 140-197 55-110 (968)
359 1mgq_A SM-like protein; LSM, R 42.2 46 0.0016 24.1 5.3 33 163-196 26-58 (83)
360 1i8f_A Putative snRNP SM-like 41.6 54 0.0019 23.6 5.5 33 163-196 22-54 (81)
361 1d3b_A Protein (small nuclear 40.0 56 0.0019 23.2 5.3 33 163-196 16-48 (75)
362 4emg_A Probable U6 snRNA-assoc 39.8 51 0.0017 24.6 5.3 33 163-196 20-52 (93)
363 4emk_A U6 snRNA-associated SM- 38.8 54 0.0018 24.6 5.2 33 163-196 31-63 (94)
364 4emk_B U6 snRNA-associated SM- 38.8 45 0.0015 23.7 4.6 32 163-195 15-46 (75)
365 1ljo_A Archaeal SM-like protei 38.8 61 0.0021 23.0 5.4 33 163-196 16-49 (77)
366 4emk_C U6 snRNA-associated SM- 38.6 53 0.0018 25.5 5.4 33 163-196 34-66 (113)
367 1b34_B Protein (small nuclear 36.8 57 0.0019 25.5 5.3 34 162-196 39-72 (118)
368 1b34_A Protein (small nuclear 36.8 1E+02 0.0035 24.1 6.8 62 163-227 13-74 (119)
369 3bw1_A SMX4 protein, U6 snRNA- 36.3 49 0.0017 24.8 4.7 33 163-196 21-53 (96)
370 3s6n_G Small nuclear ribonucle 35.7 1.1E+02 0.0039 21.5 7.4 33 163-196 15-47 (76)
371 3s6n_F Small nuclear ribonucle 35.4 1.3E+02 0.0044 21.9 7.6 61 162-225 16-76 (86)
372 3ij3_A Cytosol aminopeptidase; 34.3 13 0.00046 36.5 1.4 40 332-373 288-327 (482)
373 4a4f_A SurviVal of motor neuro 33.5 1.1E+02 0.0039 20.8 6.1 37 160-196 10-46 (64)
374 1n9r_A SMF, small nuclear ribo 33.5 1.5E+02 0.005 22.0 7.2 34 162-196 31-65 (93)
375 1y96_A Gemin6, SIP2, GEM-assoc 33.4 1.3E+02 0.0044 22.2 6.4 33 163-196 18-51 (86)
376 3pgw_B SM B; protein-RNA compl 33.0 48 0.0016 29.3 4.6 33 163-196 15-47 (231)
377 4emh_A Probable U6 snRNA-assoc 33.0 77 0.0026 24.3 5.4 62 163-226 27-88 (105)
378 3pei_A Cytosol aminopeptidase; 32.8 16 0.00056 36.1 1.8 39 333-373 290-328 (486)
379 3dor_A Protein CT_858, CPAF; m 32.3 40 0.0014 34.0 4.5 33 341-376 96-128 (583)
380 2eqj_A Metal-response element- 31.9 1.3E+02 0.0045 21.0 6.2 36 161-197 16-51 (66)
381 3kzw_A Cytosol aminopeptidase; 31.3 16 0.00054 36.3 1.4 40 332-373 321-360 (515)
382 1gyt_A Cytosol aminopeptidase; 30.9 12 0.00043 37.1 0.6 39 333-373 309-347 (503)
383 3jru_B Probable cytosol aminop 30.6 17 0.00057 36.0 1.4 39 333-373 301-339 (490)
384 1lam_A Leucine aminopeptidase; 30.4 14 0.00049 36.5 0.9 39 333-373 289-327 (484)
385 2hc9_A Leucine aminopeptidase 30.1 17 0.00059 35.9 1.4 29 345-373 301-329 (491)
386 3h8g_F Cytosol aminopeptidase; 27.7 17 0.00057 36.1 0.8 39 333-373 306-344 (497)
387 3kr4_A M17 leucyl aminopeptida 26.4 17 0.00057 36.2 0.6 29 345-373 343-371 (528)
388 2e5q_A PHD finger protein 19; 26.4 1.6E+02 0.0053 20.3 5.2 36 161-197 10-45 (63)
389 4efd_A Aminopeptidase; structu 26.2 17 0.00057 36.2 0.5 38 333-372 329-366 (522)
390 2fwk_A U6 snRNA-associated SM- 25.5 62 0.0021 25.4 3.7 32 163-195 39-70 (121)
391 3ghd_A A cystathionine beta-sy 25.2 49 0.0017 22.9 2.8 17 266-282 23-40 (70)
392 1m5q_A SMAP3, small nuclear ri 24.5 1.2E+02 0.0042 24.1 5.3 57 163-226 11-67 (130)
393 2y9a_D Small nuclear ribonucle 23.3 1.3E+02 0.0045 23.7 5.3 33 163-196 16-48 (126)
394 1mhn_A SurviVal motor neuron p 22.5 1.8E+02 0.006 19.3 6.7 35 162-196 7-41 (59)
395 2dig_A Lamin-B receptor; tudor 22.5 2E+02 0.0069 20.0 5.4 36 162-197 16-51 (68)
396 2m0o_A PHD finger protein 1; t 22.0 1.1E+02 0.0038 22.0 4.0 35 162-197 30-64 (79)
397 2l8d_A Lamin-B receptor; DNA b 22.0 2E+02 0.007 19.9 5.6 36 162-197 13-48 (66)
398 2o8m_A Protease; NS3, NS4A, vi 20.3 41 0.0014 28.8 1.7 39 262-301 146-188 (200)
399 3s6w_A Tudor domain-containing 20.2 1.9E+02 0.0063 18.7 6.5 34 163-196 6-39 (54)
No 1
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=4e-53 Score=429.70 Aligned_cols=267 Identities=49% Similarity=0.841 Sum_probs=243.2
Q ss_pred HhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeE
Q 016641 111 LALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLA 190 (385)
Q Consensus 111 ~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlA 190 (385)
...+|||+|++....++|..||+...+..+.||||+|++||||||+|||+++..+.|++.+|++.++|++++.|+.+|||
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DLA 124 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIGDGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDIA 124 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEETTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTEE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEECCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCEE
Confidence 45689999999999999999999999999999999999999999999999999999998779999999999999999999
Q ss_pred EEEecCCcccccceeeecCCcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcce
Q 016641 191 ILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPA 270 (385)
Q Consensus 191 lLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL 270 (385)
|||++...++..++++.+++.+++|++|+++|||+++...+++.|+|+++.+..+..+.....+||+|+++++|||||||
T Consensus 125 vLkv~~~~~~~~~~pl~~g~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~~~~~~~~~IQtDAaInpGnSGGPL 204 (539)
T 4fln_A 125 LLSVESEDFWKGAEPLRLGHLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYAHGSSDLLGIQIDAAINPGNSGGPA 204 (539)
T ss_dssp EEEECCSSSSTTCCCCCBCCCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECTTSCCEEEEEEESSCCCTTTTTSEE
T ss_pred EEEEeCCcCCcCCceeecCCcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccCCCCcceeEEEEEeEecCCCccchh
Confidence 99999876666778899998889999999999999887569999999999887665555566789999999999999999
Q ss_pred e-eCCEEEEEEeeecC--CCCceEEEEecchHHHHHHHHHHcCeeeeeeccCccccccccHHHHhhcCCCCccCceEEEe
Q 016641 271 I-MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNK 347 (385)
Q Consensus 271 ~-~~G~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~ 347 (385)
+ .+|+||||+++... +..+++||||++.+++++++++++|++.+|+|||+.++++.++.+++.+|++. ..|++|.+
T Consensus 205 vn~~GeVIGIntai~~~~~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~-~~Gv~V~~ 283 (539)
T 4fln_A 205 FNDQGECIGVAFQVYRSEETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPT-NEGVLVRR 283 (539)
T ss_dssp ECSSSCEEEEECCCC-----CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSS-SBCEEEEE
T ss_pred ccCCCcEEEEEEEEecCCCCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCC-cCceeeec
Confidence 9 99999999998654 45689999999999999999999999988999999999988899999999985 58999999
Q ss_pred eCCCCHHhhhcCCCCEEEEECCEEcCChhhH
Q 016641 348 INPLSDAHEILKKDDIILAFDGVPIANDGTG 378 (385)
Q Consensus 348 V~~~spA~~aL~~GDiI~~vng~~i~~~~~l 378 (385)
|.++|||+++||+||||+++||++|.+..++
T Consensus 284 V~~~spA~~al~~GDvI~~idg~~V~~~g~~ 314 (539)
T 4fln_A 284 VEPTSDASKVLKEGDVIVSFDDLHVGCEGTV 314 (539)
T ss_dssp ECTTSGGGGTCCTTCEEEEETTEECBSSSEE
T ss_pred ccCCChHHhCccCCCEEEEECCEEeCcCCee
Confidence 9999999988999999999999999887763
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=3.8e-48 Score=376.91 Aligned_cols=272 Identities=23% Similarity=0.366 Sum_probs=231.6
Q ss_pred CcHHHHHHHhCCCeEEEEeeecCCC----------CC---CCCCCCCCCcceEEEEEec-C-CEEEecccccCCCceEEE
Q 016641 103 TNAYAAIELALDSVVKIFTVSSSPN----------YG---LPWQNKSQRETTGSGFVIP-G-KKILTNAHVVADSTFVLV 167 (385)
Q Consensus 103 ~~~~~~~~~~~~SVV~I~~~~~~~~----------~~---~p~~~~~~~~~~GSGfiI~-~-g~ILT~aHvv~~~~~i~V 167 (385)
.++.++++++.+|||.|.+...... ++ .||+......+.||||+|+ + ||||||+||+.++..+.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V 92 (345)
T 3stj_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (345)
T ss_dssp CBSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEE
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEE
Confidence 4678999999999999998765421 11 1333333446789999998 4 899999999999999999
Q ss_pred EEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccc
Q 016641 168 RKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQY 245 (385)
Q Consensus 168 ~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~ 245 (385)
.+. +++.+++++++.|+.+||||||++... .+++++|+++. ..|++|+++|||++.. .+++.|+|+...+...
T Consensus 93 ~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG~p~g~~-~~vt~G~Vs~~~~~~~ 167 (345)
T 3stj_A 93 QLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSGL 167 (345)
T ss_dssp ECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGCS-CEEEEEEEEEEEECCS
T ss_pred EeC-CCcEEEEEEEEEcCCCCEEEEEEcccC---CCceEeecCcccCCCCCEEEEEECCCCCC-CcEEeeEEeeeccccc
Confidence 987 899999999999999999999997653 58899998755 5699999999999987 5999999998876522
Q ss_pred cCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecC---CCCceEEEEecchHHHHHHHHHHcCeeeeeeccCcc
Q 016641 246 VHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLS 321 (385)
Q Consensus 246 ~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~ 321 (385)
.. .....++++|+.+|+|||||||+ .+|+||||+++... +..+++||||++.++++++++.++|++. ++|||+.
T Consensus 168 ~~-~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-~~~lGv~ 245 (345)
T 3stj_A 168 NL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGIK 245 (345)
T ss_dssp SS-SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEE
T ss_pred CC-CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhccccc-cccccee
Confidence 21 22346799999999999999999 89999999998765 3467899999999999999999999988 8999999
Q ss_pred ccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 322 CQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 322 ~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
++++ ++++++.+|++. ..|++|.+|.++|||+++ ||+||+|++|||++|.+..||.+.|.
T Consensus 246 ~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~ 306 (345)
T 3stj_A 246 GTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIA 306 (345)
T ss_dssp EEEC-CHHHHHHTTCSC-CSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHH
T ss_pred eEee-cHHHHHhcCCCC-CceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 9999 899999999975 589999999999999999 99999999999999999999998763
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.5e-46 Score=376.87 Aligned_cols=273 Identities=22% Similarity=0.365 Sum_probs=236.2
Q ss_pred CCcHHHHHHHhCCCeEEEEeeecCCC----------C---CCCCCCCCCCcceEEEEEec-C-CEEEecccccCCCceEE
Q 016641 102 TTNAYAAIELALDSVVKIFTVSSSPN----------Y---GLPWQNKSQRETTGSGFVIP-G-KKILTNAHVVADSTFVL 166 (385)
Q Consensus 102 ~~~~~~~~~~~~~SVV~I~~~~~~~~----------~---~~p~~~~~~~~~~GSGfiI~-~-g~ILT~aHvv~~~~~i~ 166 (385)
..++.++++++.+|||.|.+...... + ..||+......+.||||+|+ + ||||||+|||.++..+.
T Consensus 12 ~~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~ 91 (436)
T 4a8c_A 12 LPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKIS 91 (436)
T ss_pred CCCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEE
Confidence 45789999999999999998764321 1 12343334456889999998 5 89999999999999999
Q ss_pred EEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeeccccc
Q 016641 167 VRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQ 244 (385)
Q Consensus 167 V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~ 244 (385)
|++. +++.+++++++.|+.+||||||++... .+++++|+++. ..|++|+++|||++.. .+++.|+|+...+..
T Consensus 92 V~~~-dg~~~~a~vv~~d~~~DlAllkv~~~~---~l~~~~l~~s~~~~~G~~v~aiG~P~g~~-~~vt~G~vs~~~r~~ 166 (436)
T 4a8c_A 92 IQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSG 166 (436)
T ss_pred EEeC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEEcCCCCC-ccEEEEEEeeecccc
Confidence 9997 899999999999999999999997653 58999998654 5699999999999987 599999999987752
Q ss_pred ccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecC---CCCceEEEEecchHHHHHHHHHHcCeeeeeeccCc
Q 016641 245 YVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGL 320 (385)
Q Consensus 245 ~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi 320 (385)
.. ......+|++|+.+++|||||||+ .+|+||||+++... +..+++||||++.++++++++.++|++. ++|||+
T Consensus 167 ~~-~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~-r~~lGv 244 (436)
T 4a8c_A 167 LN-LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIK-RGLLGI 244 (436)
T ss_pred cC-CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccc-cccCce
Confidence 22 223346899999999999999999 99999999998765 3457899999999999999999999988 899999
Q ss_pred cccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 321 SCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 321 ~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
.++++ ++++++.+|++. ..|++|.+|.++|||+++ ||+||+|++|||++|.+..++...|.
T Consensus 245 ~~~~~-~~~~a~~~gl~~-~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~ 306 (436)
T 4a8c_A 245 KGTEM-SADIAKAFNLDV-QRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIA 306 (436)
T ss_pred Eeccc-CHHHHHHhCCCC-CcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 99999 789999999975 589999999999999999 99999999999999999999988764
No 4
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=1.8e-46 Score=377.22 Aligned_cols=276 Identities=26% Similarity=0.403 Sum_probs=226.9
Q ss_pred CCCCcHHHHHHHhCCCeEEEEeeecCCC------------CCCCC-C--------CCCCCcceEEEEEec-C-CEEEecc
Q 016641 100 GKTTNAYAAIELALDSVVKIFTVSSSPN------------YGLPW-Q--------NKSQRETTGSGFVIP-G-KKILTNA 156 (385)
Q Consensus 100 ~~~~~~~~~~~~~~~SVV~I~~~~~~~~------------~~~p~-~--------~~~~~~~~GSGfiI~-~-g~ILT~a 156 (385)
....++.++++++.||||.|.+...... ++..| . ......+.||||+|+ + ||||||+
T Consensus 16 ~~~~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~ 95 (451)
T 3pv2_A 16 PNMPSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITND 95 (451)
T ss_dssp --CCCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECH
T ss_pred CCCCCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEECh
Confidence 3456789999999999999998753211 11111 1 112234679999998 3 8999999
Q ss_pred cccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCC----Cc
Q 016641 157 HVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGD----NI 230 (385)
Q Consensus 157 Hvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~----~~ 230 (385)
|||+++..+.|.+. +++.+++++++.|+.+||||||++.. .++++.|+++. ..|++|+++|||++.. ..
T Consensus 96 HVv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~----~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~ 170 (451)
T 3pv2_A 96 HVIRNASLITVTLQ-DGRRLKARLIGGDSETDLAVLKIDAK----NLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQ 170 (451)
T ss_dssp HHHTTEEEEEEECT-TSCEEECEEEEEETTTTEEEEECCCS----SCCCCCBCCGGGCCTTCEEEEEECCCCC-----CC
T ss_pred HHhCCCCEEEEEEc-CCCEEEEEEEecCcCCcEEEEEEcCc----CCceeEecCcccCCCCCEEEEEECCCCccccccCC
Confidence 99999999999997 89999999999999999999999764 48889998754 5699999999999865 14
Q ss_pred eEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecC---CCCceEEEEecchHHHHHHHH
Q 016641 231 SVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 231 ~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l 306 (385)
+++.|+|+...+..... .....+|++|+.+++|||||||+ .+|+||||+++... +..+++||||++.+++++++|
T Consensus 171 ~vt~Givs~~~r~~~~~-~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l 249 (451)
T 3pv2_A 171 SATFGIVSALKRSDLNI-EGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQI 249 (451)
T ss_dssp EEEEEEEEEEC-----------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHH
T ss_pred ceeEEEEeeccccccCC-CCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHH
Confidence 89999999987652221 23345799999999999999999 89999999998765 446799999999999999999
Q ss_pred HHcCeeeeeeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 307 VEHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 307 ~~~g~~~~~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
+++|++. ++|||+.++++ ++++++.+|++....|++|.+|.++|||+++ ||+||+|++|||++|.+..++...|.
T Consensus 250 ~~~g~v~-r~~lGv~~~~~-~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~ 325 (451)
T 3pv2_A 250 IKFGSIH-RGLMGIFVQHL-TPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTIS 325 (451)
T ss_dssp HHHSSCC-CCBCCEEEEEC-CHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH
T ss_pred HhcCCcc-cccccceEEec-cHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHH
Confidence 9999998 89999999999 8999999999865589999999999999999 99999999999999999999998764
No 5
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=6e-46 Score=358.22 Aligned_cols=270 Identities=22% Similarity=0.376 Sum_probs=230.2
Q ss_pred CCCcHHHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEE
Q 016641 101 KTTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQ 179 (385)
Q Consensus 101 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~ 179 (385)
...++.++++++.+|||+|.+...... |+........||||+|+ +||||||+||+.+...+.|++. +++.++++
T Consensus 7 ~~~~~~~~~~~~~~sVV~I~~~~~~~~----~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~ 81 (318)
T 1te0_A 7 TPASYNLAVRRAAPAVVNVYNRGLNTN----SHNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEAL 81 (318)
T ss_dssp CCCCCHHHHHHHGGGEEEEEEEEECSS----SSCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECT-TSCEEEEE
T ss_pred ccccHHHHHHhcCCcEEEEEeEeccCC----cccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEEE
Confidence 345678999999999999999765432 22223345789999999 5799999999999999999986 88999999
Q ss_pred EEEecCCCCeEEEEecCCcccccceeeecCCc--ccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEe
Q 016641 180 VEAVGHECDLAILIVESDEFWEGMHFLELGDI--PFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQI 257 (385)
Q Consensus 180 v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~--~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~ 257 (385)
++..|+.+||||||++... .+++++|+++ ...|++|+++|||.+.. .+++.|+|+...+..+.. .....+|++
T Consensus 82 v~~~d~~~DlAllk~~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~-~~~~~~i~~ 156 (318)
T 1te0_A 82 LVGSDSLTDLAVLIIKATG---GLPTIPINARRVPHIGDVVLAIGNPYNLG-QTITQGIISATGRIGLNP-TGRQNFLQT 156 (318)
T ss_dssp EEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTCEEEEECCCSSSS-CCEEEEEEEECCCCCCCT-TCSCCSEEE
T ss_pred EEEeCCCceEEEEEEeCCC---CCceEEeeCccCCCCCCEEEEEEcCCCCC-CcEEeeEEecccccccCC-CCcCCEEEE
Confidence 9999999999999998763 5889999864 36699999999999876 589999999877543321 123357899
Q ss_pred cccCCCCCCCccee-eCCEEEEEEeeecC------CCCceEEEEecchHHHHHHHHHHcCeeeeeeccCccccccccHHH
Q 016641 258 DAAINPGNSGGPAI-MGNKVAGVAFQNLS------GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQL 330 (385)
Q Consensus 258 d~~i~~G~SGGPL~-~~G~vVGI~s~~~~------~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~ 330 (385)
|+.+|+|||||||+ .+|+||||+++... ...+++|+||++.++++++++.++|++. ++|||+.++++ ++.+
T Consensus 157 d~~~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~-~~~lGi~~~~~-~~~~ 234 (318)
T 1te0_A 157 DASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RGYIGIGGREI-APLH 234 (318)
T ss_dssp SSCCCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCEEEEEC-SCCC
T ss_pred CCCCCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcc-cccceeEeeec-chhH
Confidence 99999999999999 79999999998765 2457899999999999999999999987 89999999998 6777
Q ss_pred HhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 331 RNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 331 ~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
++.+|++. ..|++|.+|.++|||+++ ||+||+|++|||++|.+..++.+.|.
T Consensus 235 ~~~~g~~~-~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~ 287 (318)
T 1te0_A 235 AQGGGIDQ-LQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVA 287 (318)
T ss_dssp SSSSCSSS-CCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHH
T ss_pred HHhccCCC-CCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHH
Confidence 88889864 489999999999999999 99999999999999999999988763
No 6
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=8.1e-45 Score=351.23 Aligned_cols=266 Identities=29% Similarity=0.378 Sum_probs=217.9
Q ss_pred CcHHHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEEEE
Q 016641 103 TNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVE 181 (385)
Q Consensus 103 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~ 181 (385)
..+.++++++.+|||+|...... ||.........||||+|+ +||||||+||+.+...+.|++. +++.++++++
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~v~ 88 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDRH-----PFLGREVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLL-SGDTYEAVVT 88 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEEE-----TTTTEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEecC-----ccCCCccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeC-CCCEEEEEEE
Confidence 45789999999999999875432 343322335789999999 6799999999999999999986 8899999999
Q ss_pred EecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccCC--CceeeEEEe
Q 016641 182 AVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHG--ATQLMAIQI 257 (385)
Q Consensus 182 ~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~--~~~~~~i~~ 257 (385)
..|+.+||||||++... .+++++|+++. ..|++|+++|||.+.. .+++.|+|+...+.....+ .....+|++
T Consensus 89 ~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~-~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~ 164 (325)
T 1lcy_A 89 AVDPVADIATLRIQTKE---PLPTLPLGRSADVRQGEFVVAMGSPFALQ-NTITSGIVSSAQRPARDLGLPQTNVEYIQT 164 (325)
T ss_dssp EEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEECCCTTSSS-SCCEEEEBCSCSCC---------CCCCEEE
T ss_pred EECCCCCEEEEEEcCCC---CCceEEecccccCCCCCEEEEEECCCCCC-CcEEeEEEecccccccccCCCCCCCCEEEE
Confidence 99999999999998763 58899998754 5699999999999876 5899999998766421111 122357999
Q ss_pred cccCCCCCCCccee-eCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHHc------CeeeeeeccCccccccccHHH
Q 016641 258 DAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVEH------GKYVGFCSLGLSCQTTENVQL 330 (385)
Q Consensus 258 d~~i~~G~SGGPL~-~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~~------g~~~~~~~lGi~~~~~~~~~~ 330 (385)
|+.+|+|||||||+ .+|+||||+++... .+++|+||++.+++++++++++ +++. ++|||+.++++ ++++
T Consensus 165 d~~~~~G~SGGPl~~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~-r~~lGv~~~~l-~~~~ 240 (325)
T 1lcy_A 165 DAAIDFGNAGGPLVNLDGEVIGVNTMKVT--AGISFAIPSDRLREFLHRGEKKNSSSGISGSQ-RRYIGVMMLTL-SPSI 240 (325)
T ss_dssp SSCCSTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHTCC----------------EECCEEEEEC-CHHH
T ss_pred cCCCCCCCccccEECCCCEEEEEEeEeec--CCeeEEEEHHHHHHHHHHhhhccccccccccc-ccccceEeecC-CHHH
Confidence 99999999999999 89999999998754 5799999999999999998765 3454 89999999999 7888
Q ss_pred HhhcCCCC-----ccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 331 RNNFGMRS-----EVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 331 ~~~~g~~~-----~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
++.++++. ...|++|.+|.++|||+++ ||+||+|++|||++|.+..||.++|
T Consensus 241 ~~~~~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~~~l 298 (325)
T 1lcy_A 241 LAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAV 298 (325)
T ss_dssp HHHHTTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHH
T ss_pred HHhhCccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHH
Confidence 88888752 3479999999999999999 9999999999999999999998876
No 7
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=2.1e-44 Score=361.89 Aligned_cols=272 Identities=25% Similarity=0.379 Sum_probs=228.8
Q ss_pred CcHHHHHHHhCCCeEEEEeeecC-------CCCC-CCCCC------------------C----------CCCcceEEEEE
Q 016641 103 TNAYAAIELALDSVVKIFTVSSS-------PNYG-LPWQN------------------K----------SQRETTGSGFV 146 (385)
Q Consensus 103 ~~~~~~~~~~~~SVV~I~~~~~~-------~~~~-~p~~~------------------~----------~~~~~~GSGfi 146 (385)
.++.++++++.||||.|.+.... +.++ ..|.. . ....+.||||+
T Consensus 13 ~~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~i 92 (448)
T 1ky9_A 13 PSLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVI 92 (448)
T ss_dssp CCSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEE
T ss_pred ccHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEE
Confidence 36789999999999999876432 1111 11110 0 01135799999
Q ss_pred ec-C-CEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEe
Q 016641 147 IP-G-KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVG 222 (385)
Q Consensus 147 I~-~-g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG 222 (385)
|+ + ||||||+|||.++..+.|++. |++.++|++++.|+.+||||||++... .+++++|+++. +.|++|+++|
T Consensus 93 i~~~~g~IlTn~HVv~~a~~i~V~~~-dg~~~~a~vv~~d~~~DlAvlkv~~~~---~~~~~~l~~s~~~~~G~~V~aiG 168 (448)
T 1ky9_A 93 IDADKGYVVTNNHVVDNATVIKVQLS-DGRKFDAKMVGKDPRSDIALIQIQNPK---NLTAIKMADSDALRVGDYTVAIG 168 (448)
T ss_dssp EETTTTEEEEEHHHHTTEEEEEEEET-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTCEEEEEE
T ss_pred EECCCCEEEEChHHhCCCCEEEEEEC-CCCEEEEEEEEEcCCCCEEEEEecCCC---CCceEEecccccCCCCCEEEEEE
Confidence 98 4 899999999999999999997 899999999999999999999998643 58899999764 5699999999
Q ss_pred cCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecC---CCCceEEEEecch
Q 016641 223 YPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPV 298 (385)
Q Consensus 223 ~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~---~~~~~~~aip~~~ 298 (385)
||++.. .+++.|+|+...+... .......+|++|+.+++|||||||+ .+|+||||+++... +..+++|+||++.
T Consensus 169 ~P~g~~-~tvt~Givs~~~r~~~-~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~ 246 (448)
T 1ky9_A 169 NPFGLG-ETVTSGIVSALGRSGL-NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNM 246 (448)
T ss_dssp CTTSSS-CEEEEEEEEEESSCC------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHH
T ss_pred CCCCCC-CeEEeEEEeecccccc-CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeeccc
Confidence 999987 5999999999876521 1122346799999999999999999 89999999998754 3357899999999
Q ss_pred HHHHHHHHHHcCeeeeeeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhh
Q 016641 299 IKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 299 i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~ 377 (385)
++++++++.++|++. ++|||+.++++ ++++++.+|++. ..|++|.+|.++|||+++ ||+||+|++|||++|.+..+
T Consensus 247 ~~~~~~~l~~~g~v~-~~~LGv~~~~~-~~~~a~~lgl~~-~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~ 323 (448)
T 1ky9_A 247 VKNLTSQMVEYGQVK-RGELGIMGTEL-NSELAKAMKVDA-QRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAA 323 (448)
T ss_dssp HHHHHHHHHHHSSCC-BCCCCCSCCCT-TSHHHHTSCCTT-CCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHH
T ss_pred chhhHHHHhhhcccc-eeccccccccc-cHHHHHHhCCCC-CCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHH
Confidence 999999999999998 89999999998 788999999975 479999999999999999 99999999999999999999
Q ss_pred HHhhhc
Q 016641 378 GSHSML 383 (385)
Q Consensus 378 l~~~l~ 383 (385)
|...|.
T Consensus 324 l~~~l~ 329 (448)
T 1ky9_A 324 LRAQVG 329 (448)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 988764
No 8
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=1.7e-44 Score=352.15 Aligned_cols=269 Identities=26% Similarity=0.363 Sum_probs=224.2
Q ss_pred CCcHHHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEEE
Q 016641 102 TTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQV 180 (385)
Q Consensus 102 ~~~~~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v 180 (385)
+....++++++.+|||.|.......+++..+. .....+.||||+|+ +||||||+||+.++..+.|.+. +++.+++++
T Consensus 16 e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~-~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~-~g~~~~a~~ 93 (348)
T 3qo6_A 16 ELATVRLFQENTPSVVYITNLAVRQDAFTLDV-LEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLA-DQTTFDAKV 93 (348)
T ss_dssp HHHHHHHHHHHGGGEEEEEEEEEEECSSSCCE-EEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECT-TSCEEEEEE
T ss_pred hhHHHHHHHHhCCCEEEEEEEeeccccccccc-ccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEEC-CCCEEEEEE
Confidence 44567899999999999998765443322111 11124689999999 6799999999999999999986 889999999
Q ss_pred EEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccC--CCceeeEEE
Q 016641 181 EAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVH--GATQLMAIQ 256 (385)
Q Consensus 181 ~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~--~~~~~~~i~ 256 (385)
+..|+.+||||||++.+. ..+++++|+++. ..|+.|+++|||.+.. .+++.|+|+...+..... +.....+++
T Consensus 94 v~~d~~~DlAlLkl~~~~--~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i~ 170 (348)
T 3qo6_A 94 VGFDQDKDVAVLRIDAPK--NKLRPIPVGVSADLLVGQKVFAIGNPFGLD-HTLTTGVISGLRREISSAATGRPIQDVIQ 170 (348)
T ss_dssp EEEEGGGTEEEEECCCCG--GGCCCCCBCCSTTCCTTCEEEEEECGGGCT-TEEEEEEEEEEEEEECCSSSSSCEEEEEE
T ss_pred EEEcCcCCEEEEEEcCCC--CCceeEEecCcccCCCCCEEEEEECCCCCC-CcEeEEEEEeeccccccccCCCcccCEEE
Confidence 999999999999998753 358899998654 5699999999999877 489999999877643221 223346799
Q ss_pred ecccCCCCCCCccee-eCCEEEEEEeeecC---CCCceEEEEecchHHHHHHHHHHcCeeeeeeccCccccccccHHHHh
Q 016641 257 IDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRN 332 (385)
Q Consensus 257 ~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~ 332 (385)
+|+.+|+|||||||+ .+|+||||+++... ...+++|+||++.+++++++++++|++. +||||+.+++.. ..+
T Consensus 171 ~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~-~~~lGi~~~~~~---~~~ 246 (348)
T 3qo6_A 171 TDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVT-RPILGIKFAPDQ---SVE 246 (348)
T ss_dssp ECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCC-CEECCCEECCTT---TTT
T ss_pred EeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCcee-eeecCcEEccch---hhh
Confidence 999999999999999 89999999998765 2468999999999999999999999998 899999987542 234
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhh-cCC-----------CCEEEEECCEEcCChhhHHhhhc
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEI-LKK-----------DDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~a-L~~-----------GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
.+++ .|++|.+|.++|||+++ ||+ ||+|++|||++|.+..||.++|.
T Consensus 247 ~~~~----~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~ 305 (348)
T 3qo6_A 247 QLGV----SGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILD 305 (348)
T ss_dssp TTTC----SSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHT
T ss_pred hcCC----ceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHH
Confidence 4554 69999999999999999 999 99999999999999999998873
No 9
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=1.3e-42 Score=335.82 Aligned_cols=251 Identities=27% Similarity=0.357 Sum_probs=211.8
Q ss_pred CcHHHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCc---------eEEEEEcCC
Q 016641 103 TNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADST---------FVLVRKHGS 172 (385)
Q Consensus 103 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~---------~i~V~~~~~ 172 (385)
.++.++++++.+|||+|..... .....||||+|+ ++|||||+||+.+.. .+.|++. +
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~------------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~-~ 72 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG------------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFS-D 72 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC----------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEET-T
T ss_pred ccHHHHHHHhcCcEEEEEEEcc------------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeC-C
Confidence 4678999999999999987532 234689999999 489999999998765 7899986 8
Q ss_pred CcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccCC--
Q 016641 173 PTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHG-- 248 (385)
Q Consensus 173 g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~-- 248 (385)
++.++++++..|+.+||||||++.+. .+++++|+++. ..|+.|+++|||.+.. .+++.|+|+...+......
T Consensus 73 g~~~~a~vv~~d~~~DlAllkl~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~G~vs~~~~~~~~~~~~ 148 (324)
T 1y8t_A 73 GRTAPFTVVGADPTSDIAVVRVQGVS---GLTPISLGSSSDLRVGQPVLAIGSPLGLE-GTVTTGIVSALNRPVSTTGEA 148 (324)
T ss_dssp CCEECEEEEECCTTTTEEEEEECSCC---SCCCCEECCSTTCCTTCEEEEEECGGGCT-TEEEEEEEEEEEEEECC----
T ss_pred CCEEEEEEEEeCCCCCEEEEEECCCC---CCceEEecCcccCCCCCEEEEEEcCCCCC-CcEeeeEEeeccccccccccc
Confidence 89999999999999999999999753 58899998753 5699999999999876 4889999998765322111
Q ss_pred ---CceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecCC----------CCceEEEEecchHHHHHHHHHHcCeeee
Q 016641 249 ---ATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLSG----------AENIGYIIPVPVIKHFITGVVEHGKYVG 314 (385)
Q Consensus 249 ---~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~~----------~~~~~~aip~~~i~~~l~~l~~~g~~~~ 314 (385)
.....+|++|+.+|+|||||||+ .+|+||||+++.... ..+++|+||++.+++++++++++|++.
T Consensus 149 g~~~~~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~- 227 (324)
T 1y8t_A 149 GNQNTVLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKAS- 227 (324)
T ss_dssp ---CCCEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCC-
T ss_pred CcccccCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCcc-
Confidence 12346899999999999999999 899999999987542 247899999999999999999999987
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
++|||+.++... ...|++|.+|.++|||+++ ||+||+|++|||++|.+..+|.+.|.
T Consensus 228 ~~~lGi~~~~~~------------~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~ 285 (324)
T 1y8t_A 228 HASLGVQVTNDK------------DTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVR 285 (324)
T ss_dssp CEECCEEEESCS------------SSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHH
T ss_pred ccccceEeeecc------------CCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 899999986541 2379999999999999999 99999999999999999999988763
No 10
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1e-43 Score=344.65 Aligned_cols=268 Identities=25% Similarity=0.380 Sum_probs=155.3
Q ss_pred CCCcHHHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEE
Q 016641 101 KTTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQ 179 (385)
Q Consensus 101 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~ 179 (385)
....+.++++++.+|||+|...... ||.......+.||||+|+ +||||||+||+.++..+.|.+. +++.++++
T Consensus 12 ~~~~~~~~~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~-~g~~~~a~ 85 (332)
T 3num_A 12 KYNFIADVVEKIAPAVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAK 85 (332)
T ss_dssp HHCHHHHHHHHHGGGEEEEEEEEEC-----TTSSCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEET-TSCEEEEE
T ss_pred ccchHHHHHHHhcCcEEEEEEEecc-----ccCCCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEEC-CCCEEEEE
Confidence 3567889999999999999986642 344444456789999999 5799999999999999999997 88999999
Q ss_pred EEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccC--CCceeeEE
Q 016641 180 VEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVH--GATQLMAI 255 (385)
Q Consensus 180 v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~--~~~~~~~i 255 (385)
++..|+.+||||||++.+. .++++.++++. ..|+.|+++|||.+.. .+++.|+|+...+..... ......++
T Consensus 86 ~~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i 161 (332)
T 3num_A 86 IKDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQ-NTVTTGIVSTTQRGGKELGLRNSDMDYI 161 (332)
T ss_dssp EEEEETTTTEEEEEECCSS---CCCCCCBCCTTSCCTTCEEEEECC------CCEEEEEEEEC--------------CCE
T ss_pred EEEecCCCCeEEEEEcCCC---CCceeeecCcccCCCCCEEEEEECCCCCC-cceeeeEEEeecccccccCcCCCcCCEE
Confidence 9999999999999999764 57888887654 5699999999999877 588999998876532211 11223568
Q ss_pred EecccCCCCCCCccee-eCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHH---cC--eeeeeeccCccccccccHH
Q 016641 256 QIDAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE---HG--KYVGFCSLGLSCQTTENVQ 329 (385)
Q Consensus 256 ~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~---~g--~~~~~~~lGi~~~~~~~~~ 329 (385)
++|+.+++|||||||+ .+|+||||+++... .+++|+||++.++++++++.+ .| .+. ++|||+.++++ +..
T Consensus 162 ~~d~~i~~G~SGGPlv~~~G~vvGI~s~~~~--~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~-r~~lGi~~~~~-~~~ 237 (332)
T 3num_A 162 QTDAIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHDRQAKGKAITK-KKYIGIRMMSL-TSS 237 (332)
T ss_dssp EESSCCCTTTTTSEEEETTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHCC--------------------------
T ss_pred EEECCcCCCCcHHHhhCCCCcEEEEEeeEec--ccceEEECHHHHHHHHHHHhhhhccCccccc-ccccceEEEec-CHH
Confidence 9999999999999999 89999999998754 589999999999999999742 33 333 79999999887 444
Q ss_pred HHhhc-----CCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 330 LRNNF-----GMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 330 ~~~~~-----g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
.++.+ +++....|++|.+|.++|||+++ ||+||+|++|||++|.+..+|.++|
T Consensus 238 ~~~~~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l 296 (332)
T 3num_A 238 KAKELKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVI 296 (332)
T ss_dssp -----------------------------------------------------------
T ss_pred HhhhhhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 44433 34444579999999999999999 9999999999999999999998765
No 11
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=1.7e-35 Score=274.40 Aligned_cols=206 Identities=24% Similarity=0.376 Sum_probs=156.4
Q ss_pred CCcHHHHHHHhCCCeEEEEeeecCCC------C-------CCCCCCCCCCcceEEEEEec-C-CEEEecccccCCCceEE
Q 016641 102 TTNAYAAIELALDSVVKIFTVSSSPN------Y-------GLPWQNKSQRETTGSGFVIP-G-KKILTNAHVVADSTFVL 166 (385)
Q Consensus 102 ~~~~~~~~~~~~~SVV~I~~~~~~~~------~-------~~p~~~~~~~~~~GSGfiI~-~-g~ILT~aHvv~~~~~i~ 166 (385)
..++.++++++.+|||+|.+...... + ..||+......+.||||+|+ + ||||||+|||.++..+.
T Consensus 12 ~~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~ 91 (245)
T 3sti_A 12 LPSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKIS 91 (245)
T ss_dssp CCBSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEE
T ss_pred CCCHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEE
Confidence 34678999999999999998764321 1 11333233346789999999 4 79999999999999999
Q ss_pred EEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeeccccc
Q 016641 167 VRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQ 244 (385)
Q Consensus 167 V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~ 244 (385)
|.+. +++.++++++..|+.+||||||++... .+++++|+++. ..|++|+++|||++.. .+++.|+|+...+..
T Consensus 92 V~~~-dg~~~~a~vv~~d~~~DlAlLkv~~~~---~~~~~~l~~s~~~~~G~~v~aiG~P~g~~-~~vt~G~vs~~~~~~ 166 (245)
T 3sti_A 92 IQLN-DGREFDAKLIGSDDQSDIALLQIQNPS---KLTQIAIADSDKLRVGDFAVAVGNPFGLG-QTATSGIVSALGRSG 166 (245)
T ss_dssp EECT-TSCEEEEEEEEEETTTTEEEEEESSCC---SCCCCCBCCGGGCCTTBEEEEEECGGGSC-CEEEEEEEEECSSCS
T ss_pred EEEC-CCCEEEEEEEEecCCCCEEEEEeccCC---CCceeeecCcCCCCCCCEEEEEECCCCCC-CcEEeeEEeeecccc
Confidence 9987 899999999999999999999997653 58899998754 5699999999999987 599999999987652
Q ss_pred ccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecC---CCCceEEEEecchHHHHHHHHHHcCeee
Q 016641 245 YVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVVEHGKYV 313 (385)
Q Consensus 245 ~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l~~~g~~~ 313 (385)
... .....++++|+.+++|||||||+ .+|+||||+++... +..+++||||++.+++++++|+++|++.
T Consensus 167 ~~~-~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~~~ 238 (245)
T 3sti_A 167 LNL-EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIL 238 (245)
T ss_dssp SCC-TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHHHHC
T ss_pred cCC-CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHHHHHHHHHHHHcCCCC
Confidence 221 22335799999999999999999 89999999998765 3457899999999999999999999875
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=1.4e-35 Score=274.18 Aligned_cols=213 Identities=30% Similarity=0.426 Sum_probs=162.6
Q ss_pred CcHHHHHHHhCCCeEEEEeeecCCCCC-----CCC-----CCC----CCC-cceEEEEEec-CCEEEecccccCCCceEE
Q 016641 103 TNAYAAIELALDSVVKIFTVSSSPNYG-----LPW-----QNK----SQR-ETTGSGFVIP-GKKILTNAHVVADSTFVL 166 (385)
Q Consensus 103 ~~~~~~~~~~~~SVV~I~~~~~~~~~~-----~p~-----~~~----~~~-~~~GSGfiI~-~g~ILT~aHvv~~~~~i~ 166 (385)
.++.++++++.||||+|.+........ .|| ... ... ...||||+|+ +||||||+||+.++..+.
T Consensus 4 ~~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~ 83 (239)
T 1l1j_A 4 SPIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNIT 83 (239)
T ss_dssp CHHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCE
T ss_pred hhHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEE
Confidence 467899999999999999875432110 011 100 111 4679999999 579999999999999999
Q ss_pred EEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeeccccc
Q 016641 167 VRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQ 244 (385)
Q Consensus 167 V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~ 244 (385)
|.+. +++.++++++..|+.+||||||++.+. +.+++++|+++. ..|++|+++|||.+.. .+++.|+|+...+..
T Consensus 84 V~~~-~g~~~~a~vv~~d~~~DlAllkl~~~~--~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~-~~vt~Givs~~~r~~ 159 (239)
T 1l1j_A 84 VTML-DGSKYDAEYIGGDEELDIAVIKIKASD--KKFPYLEFGDSDKVKIGEWAIAIGNPLGFQ-HTVTVGVVSATNRRI 159 (239)
T ss_dssp EECT-TSCEEEBCCCEEETTTTEEEEEBCCSS--SCCCCCEECCGGGCCTTCEEEEEECTTSSS-CEEEEEEEEEEEEEE
T ss_pred EEEC-CCCEEEEEEEEEcCCCCEEEEEEcCCC--CCCceEEecCccCCccccEEEEEECCCCCC-CcEEEEEEecccccc
Confidence 9986 889999999999999999999998752 258899998764 5699999999999876 589999999877642
Q ss_pred ccCC--CceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecC--CCCceEEEEecchHHHHHHHHHHcCeeeeeeccC
Q 016641 245 YVHG--ATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVEHGKYVGFCSLG 319 (385)
Q Consensus 245 ~~~~--~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lG 319 (385)
.... .....+|++|+.+|+|||||||+ .+|+||||+++... +..+++||||++.+++++++|+++|++. |+|||
T Consensus 160 ~~~~~~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~~~~~~g~~faIP~~~~~~~~~~l~~~g~v~-r~~lG 238 (239)
T 1l1j_A 160 PKPDGSGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVNPQEAVNLGFAIPINTVKKFLDTILTQKKVE-KAYLG 238 (239)
T ss_dssp ECTTSSCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSCCCSCCSCEEEEEHHHHHHHHGGGCC-----------
T ss_pred ccCCCccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeecCCCcCceEEEEEHHHHHHHHHHHHHCCCCc-cceeC
Confidence 2111 12346899999999999999999 89999999998764 2248999999999999999999999998 89999
Q ss_pred c
Q 016641 320 L 320 (385)
Q Consensus 320 i 320 (385)
+
T Consensus 239 v 239 (239)
T 1l1j_A 239 V 239 (239)
T ss_dssp -
T ss_pred c
Confidence 6
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=1.2e-33 Score=261.24 Aligned_cols=206 Identities=22% Similarity=0.369 Sum_probs=170.0
Q ss_pred CCCcHHHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEE
Q 016641 101 KTTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQ 179 (385)
Q Consensus 101 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~ 179 (385)
...++.++++++.+|||+|........+ .......+.||||+|+ +||||||+||+.+...+.|.+. +++.++++
T Consensus 18 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~----~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~-~g~~~~a~ 92 (237)
T 3lgi_A 18 TPASYNLAVRRAAPAVVNVYNRGLNTNS----HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQ-DGRVFEAL 92 (237)
T ss_dssp CCCBCHHHHHHHGGGEEEEEEECCTTTC----TTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECT-TSCEEEEE
T ss_pred CCcCHHHHHHHhCCcEEEEEEEecccCc----ccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeC-CCCEEEEE
Confidence 3456789999999999999987654322 2233455789999999 5799999999999999999986 88999999
Q ss_pred EEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEe
Q 016641 180 VEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQI 257 (385)
Q Consensus 180 v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~ 257 (385)
++..|+.+||||||++... .+++++|++.. ..|+.|+++|||.+.. ..++.|+|+...+..... .....++++
T Consensus 93 vv~~d~~~DlAll~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~~~~-~~~~~g~vs~~~~~~~~~-~~~~~~i~~ 167 (237)
T 3lgi_A 93 LVGSDSLTDLAVLKINATG---GLPTIPINARRVPHIGDVVLAIGNPYNLG-QTITQGIISATGRIGLNP-TGRQNFLQT 167 (237)
T ss_dssp EEEEETTTTEEEEECCCSS---CCCCCCCCTTCCCCTTBEEEEEECGGGSC-SEEEEEEEEEECCSSCCT-TSCSCCEEE
T ss_pred EEEEcCCCCEEEEEecCCC---CCceEeccCcccCCCCCEEEEEECCCCCC-CcEEEEEEEecccccccC-CCcCCEEEE
Confidence 9999999999999998764 47888887543 5699999999999876 589999999877654322 223356899
Q ss_pred cccCCCCCCCccee-eCCEEEEEEeeecC------CCCceEEEEecchHHHHHHHHHHcCeeeeeec
Q 016641 258 DAAINPGNSGGPAI-MGNKVAGVAFQNLS------GAENIGYIIPVPVIKHFITGVVEHGKYVGFCS 317 (385)
Q Consensus 258 d~~i~~G~SGGPL~-~~G~vVGI~s~~~~------~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~~ 317 (385)
|+.+|+|||||||+ .+|+||||+++.+. ...+++||||++.+++++++|+++|++. ++|
T Consensus 168 d~~i~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~i~~~~~~l~~~g~~~-~~~ 233 (237)
T 3lgi_A 168 DASINHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVI-RHH 233 (237)
T ss_dssp CSCCCTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHHHHHHHHHHHHHSSCC-C--
T ss_pred cCccCCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHHHHHHHHHHHHcCCCC-Cch
Confidence 99999999999999 89999999998654 2457899999999999999999999876 443
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=1.5e-32 Score=252.80 Aligned_cols=196 Identities=28% Similarity=0.418 Sum_probs=159.9
Q ss_pred CCCcHHHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEE
Q 016641 101 KTTNAYAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQ 179 (385)
Q Consensus 101 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~ 179 (385)
....+.++++++.+|||+|...... ||.......+.||||+|+ +||||||+||+.+...+.|.+. +++.++++
T Consensus 29 ~~~~~~~~~~~~~~sVV~I~~~~~~-----~~~~~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~-~g~~~~a~ 102 (231)
T 3tjo_A 29 KYNFIADVVEKIAPAVVHIELFRKL-----PFSKREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELK-NGATYEAK 102 (231)
T ss_dssp HSCHHHHHHHHHGGGEEEEEEEEEC-----TTSSCEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECT-TSCEEEEE
T ss_pred hhhHHHHHHHHhcCcEEEEEEEecc-----ccCCCccccceEEEEEEeCCCEEEEchhcccCCceEEEEcC-CCCEEEEE
Confidence 3577899999999999999986642 333333344789999999 5799999999999999999986 88999999
Q ss_pred EEEecCCCCeEEEEecCCcccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccC--CCceeeEE
Q 016641 180 VEAVGHECDLAILIVESDEFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVH--GATQLMAI 255 (385)
Q Consensus 180 v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~--~~~~~~~i 255 (385)
++..|+.+||||||++.+. .++++.|++.. ..|+.|+++|||.+.. .+++.|+|+...+..... ......++
T Consensus 103 v~~~d~~~DlAlL~l~~~~---~~~~~~l~~~~~~~~G~~v~~~G~p~g~~-~~~~~g~vs~~~~~~~~~~~~~~~~~~i 178 (231)
T 3tjo_A 103 IKDVDEKADIALIKIDHQG---KLPVLLLGRSSELRPGEFVVAIGSPFSLQ-NTVTTGIVSTTQRGGKELGLRNSDMDYI 178 (231)
T ss_dssp EEEEETTTTEEEEECCCSS---CCCCCCBCCGGGCCTTCEEEEEEEEETTE-EEEEEEEEEECC-------------CCE
T ss_pred EEEecCCCCEEEEEecCCC---CCCceecCCcCCCCCCCEEEEEECCCCCC-CceeeEEEeeccccccccccCCCcccEE
Confidence 9999999999999999753 57888887654 5699999999999876 588999999876532211 11223578
Q ss_pred EecccCCCCCCCccee-eCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHH
Q 016641 256 QIDAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 256 ~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
++|+.+++|||||||+ .+|+||||+++... .+++||||++.++++|+++++
T Consensus 179 ~~da~i~~G~SGGPLv~~~G~vVGI~s~~~~--~g~~~aip~~~i~~~l~~~~~ 230 (231)
T 3tjo_A 179 QTDAIINYGNAGGPLVNLDGEVIGINTLKVT--AGISFAIPSDKIKKFLTESHD 230 (231)
T ss_dssp EESSCCCTTTTTSEEECTTSCEEEEEEEEEE--TTEEEEEEHHHHHHHHHHHHT
T ss_pred EEcCCcCCCCchhHeecCCCeEEEEEeEEec--CCeEEEEEHHHHHHHHHHHhh
Confidence 9999999999999999 89999999998754 579999999999999999874
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.97 E-value=7.2e-30 Score=235.74 Aligned_cols=189 Identities=27% Similarity=0.375 Sum_probs=153.9
Q ss_pred HHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecC
Q 016641 106 YAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGH 185 (385)
Q Consensus 106 ~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~ 185 (385)
.++++++.+|||+|...... ......||||+|+++|||||+||+.+...+.|.+. + ..++++++..|+
T Consensus 34 ~~~~~~~~~svV~I~~~~~~----------~~~~~~GsG~iI~~~~VlTaaH~v~~~~~~~V~~~-~-~~~~~~~v~~~~ 101 (237)
T 3k6y_A 34 NPVVAATEPSVVKIRSLAPR----------CQKVLEGTGFVISPDRVMTNAHVVAGSNNVTVYAG-D-KPFEATVVSYDP 101 (237)
T ss_dssp CHHHHHHGGGEEEEEEEEGG----------GTEEEEEEEEEEETTEEEECGGGTTTCSEEEEEET-T-EEEECEEEEEET
T ss_pred HHHHHHhcCCEEEEEEEecC----------CCcceeEEEEEEECCEEEECHHHcCCCceEEEEEC-C-cEEEEEEEEEcC
Confidence 46789999999999986532 22456899999999999999999999999999986 4 588999999999
Q ss_pred CCCeEEEEecCCcccccceeeecCCc-ccCCCeEEEEecCCCCCCceEEEeeEeeccc----ccccCCC-ceeeEEEecc
Q 016641 186 ECDLAILIVESDEFWEGMHFLELGDI-PFLQQAVAVVGYPQGGDNISVTKGVVSRVEP----TQYVHGA-TQLMAIQIDA 259 (385)
Q Consensus 186 ~~DlAlLkv~~~~~~~~~~~l~l~~~-~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~----~~~~~~~-~~~~~i~~d~ 259 (385)
.+||||||++.. .+++++|++. ...|+.|+++|||.+.. .....|.++.... ..+.... ....++++++
T Consensus 102 ~~DiAll~l~~~----~~~~~~l~~~~~~~G~~v~v~G~p~g~~-~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (237)
T 3k6y_A 102 SVDVAILAVPHL----PPPPLVFAAEPAKTGADVVVLGYPGGGN-FTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRA 176 (237)
T ss_dssp TTTEEEEECTTC----CSCCCCBCSSCCCTTCEEEEEECGGGCS-CEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEES
T ss_pred CCCEEEEEeCCC----CCCceecCCCCCCCCCEEEEEECCCCCC-CccceeEEEeeEeecccccccCCCcccccEEEecC
Confidence 999999999843 4788888743 36699999999998876 4777777765432 1121222 3345789999
Q ss_pred cCCCCCCCccee-eCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHHcCe
Q 016641 260 AINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVEHGK 311 (385)
Q Consensus 260 ~i~~G~SGGPL~-~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~~g~ 311 (385)
.+|+|||||||+ .+|+||||+++...+.++++|+||++.++++++++.....
T Consensus 177 ~~~~GdSGGPLv~~~G~vvGI~s~~~~~~~~~~~aip~~~v~~~l~~~~~~~~ 229 (237)
T 3k6y_A 177 DVEQGDSGGPLIDLNGQVLGVVFGAAIDDAETGFVLTAGEVAGQLAKIGATQP 229 (237)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEECSSSTTEEEEEEHHHHHGGGGGTTCCSC
T ss_pred ccCCCccHHHEECCCCEEEEEEEeeccCCCcEEEEEEHHHHHHHHHHccCCCC
Confidence 999999999999 8999999999987766789999999999999999854433
No 16
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.91 E-value=1.8e-24 Score=195.94 Aligned_cols=179 Identities=26% Similarity=0.470 Sum_probs=136.3
Q ss_pred CCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCc---eEEEEEc---CCCcEEEE-EEEEecC
Q 016641 113 LDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADST---FVLVRKH---GSPTKYRA-QVEAVGH 185 (385)
Q Consensus 113 ~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~---~i~V~~~---~~g~~~~a-~v~~~d~ 185 (385)
.+++|+|.. ...+||+... ....|+||+|+++||||||||+.+.. .+.|... .+++.+.+ +++.+|+
T Consensus 2 ~~~~~~i~~-----~~~~P~~v~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~ 75 (210)
T 2as9_A 2 EKNVTQVKD-----TNNFPYNGVV-SFKDATGFVIGKNTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPG 75 (210)
T ss_dssp CCCEEECSC-----TTSTTGGGEE-ECSSCEEEEEETTEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSS
T ss_pred CCceEEeec-----CCcCCeEEEE-EeeeEEEEEEeCCEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCC
Confidence 356777754 2356887643 24679999999999999999997543 6666531 26777888 4788889
Q ss_pred CCCeEEEEecCC---------cccccceeeecCCcccCCCeEEEEecCCCCCC---ceEEEeeEeecccccccCCCceee
Q 016641 186 ECDLAILIVESD---------EFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---ISVTKGVVSRVEPTQYVHGATQLM 253 (385)
Q Consensus 186 ~~DlAlLkv~~~---------~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~---~~~~~G~Vs~~~~~~~~~~~~~~~ 253 (385)
.+||||||++.. .+.+.+++++|++....|+.|+++|||.+... ..+..|+|+.... .
T Consensus 76 ~~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~~----------~ 145 (210)
T 2as9_A 76 DEDISVMNIEEQAVERGPKGFNFNENVQAFNFAKDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIKD----------N 145 (210)
T ss_dssp SSSCEEEEECSEEEEEETTEEEGGGSCCCCCBCSCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEET----------T
T ss_pred CCcEEEEEecCccccccccccccccccceeecCCCCCCCCEEEEEeCCCCCCCCcceEEeeeEEccccC----------C
Confidence 999999999873 22345788888755567999999999976442 2357788876421 3
Q ss_pred EEEecccCCCCCCCccee-eCCEEEEEEeeecC--CCCceEEEEecchHHHHHHHHH
Q 016641 254 AIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 254 ~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~ 307 (385)
.+++++.+|+|||||||+ .+|+||||+++... +....+|++|.+.++++++...
T Consensus 146 ~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~i~~f~~~~~ 202 (210)
T 2as9_A 146 ILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIGSEYNGAVYFTPQIKDFIQKHI 202 (210)
T ss_dssp EEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTTCSSEEEEECCHHHHHHHHTTC
T ss_pred eEEEcCccCCCCccCcEECCCCeEEEEEecccccCCccccccEEEcHHHHHHHHHhh
Confidence 477889999999999999 79999999998765 3456789999999999998754
No 17
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.90 E-value=7e-23 Score=177.81 Aligned_cols=137 Identities=28% Similarity=0.349 Sum_probs=105.0
Q ss_pred CcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCe
Q 016641 138 RETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQA 217 (385)
Q Consensus 138 ~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~ 217 (385)
..+.||||+| +||||||+|||+++..++|++ +++.++++++ .|+..||||||++... ..+++++|++.... +.
T Consensus 19 ~~~~GSGfii-~g~IlTn~HVV~~~~~i~V~~--dg~~~~a~vv-~d~~~DlAlLkv~~~~--~~~~~l~l~~~~~~-~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS-GNDIVTAAHVVGNNTFVNVCY--EGLMYEAKVR-YMPEKDIAFITCPGDL--HPTARLKLSKNPDY-SC 91 (163)
T ss_dssp TTEEEEEEEE-TTEEEEEHHHHTTCSEEEEEE--TTEEEEEEEE-ECCSSSEEEEECCTTC--CCSCCCCBCSSCCT-TE
T ss_pred CceeEEEEEE-CCEEEecHHHhCCCceEEEEE--CCEEEEEEEE-EECCCCEEEEEecCCC--CCcceEEcCCCCCC-CE
Confidence 3468999999 999999999999999999998 7899999999 8999999999998753 24566778876554 88
Q ss_pred EEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeecCCCCceEEEEec
Q 016641 218 VAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNLSGAENIGYIIPV 296 (385)
Q Consensus 218 V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~~~~~~~~~aip~ 296 (385)
|+++|+|.+. ...+.+ .... .+ ..+.+++.+++|||||||+ .+|+||||++.... ..+ +|+|..
T Consensus 92 v~~~G~p~~~--~~~s~~-----~~~~--~g----~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~g-~~g-g~ai~~ 156 (163)
T 2w5e_A 92 VTVMAYVNED--LVVSTA-----AAMV--YG----NTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNTG-YTG-GAVIID 156 (163)
T ss_dssp EEEEEEETTE--EEEEEE-----EEEE--ET----TEEEEECSCSSCCTTCEEECTTSCEEEEEEEEET-TEE-EEEECC
T ss_pred EEEEEeCCCC--EEEEEe-----ccEE--cC----CeEEEEEEeCCCCchhhEEcCCCEEEEEEccCcc-ccc-CEEEec
Confidence 9999999652 111111 1100 01 2356779999999999999 99999999987543 334 777754
No 18
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.87 E-value=1.8e-22 Score=180.95 Aligned_cols=168 Identities=21% Similarity=0.418 Sum_probs=120.4
Q ss_pred CCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCc----eEEEEEc---CCCcEEEE-EEEEecCCCCeEEEEecCC-
Q 016641 127 NYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADST----FVLVRKH---GSPTKYRA-QVEAVGHECDLAILIVESD- 197 (385)
Q Consensus 127 ~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~----~i~V~~~---~~g~~~~a-~v~~~d~~~DlAlLkv~~~- 197 (385)
...+||+.... ...|+||+|+++||||||||+.+.. .+.+... .+++.+.+ +++.+|+.+||||||++.+
T Consensus 10 ~~~~P~~v~~~-~~~c~G~lI~~~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~ 88 (200)
T 2w7s_A 10 ATKEPYNSVVA-FVGGTGVVVGKNTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETS 88 (200)
T ss_dssp TTSTTGGGEEE-ETTEEEEEEETTEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBC
T ss_pred cccCCcccccc-cceEEEEEEECCEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCC
Confidence 34567876432 3579999999999999999997543 3555431 35677777 5778888999999999874
Q ss_pred ----cccccceeeecCCcccCCCeEEEEecCCCCCC---ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcce
Q 016641 198 ----EFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPA 270 (385)
Q Consensus 198 ----~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~---~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL 270 (385)
.+.+.++|++|++....|+.++++|||.+... ..+..|+++.... .++++++.+|+|||||||
T Consensus 89 ~~~~~~~~~v~pi~l~~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~GdSGGPl 158 (200)
T 2w7s_A 89 TEGLNFNKNVSYTKFADGAKVKDRISVIGYPKGAQTKYKMFESTGTINHISG----------TFMEFDAYAQPGNSGSPV 158 (200)
T ss_dssp TTSCBGGGSCCCCCBCCCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEET----------TEEEECSCCCTTCTTCEE
T ss_pred CCcccccccccceeccccCCCCCEEEEEECCCCCCCccceEEeEEEEEccCC----------CEEEEcceeCCCCccCeE
Confidence 24456888888755567999999999975321 2356777775321 246788999999999999
Q ss_pred e-eCCEEEEEEeeecCCC-CceEEEE-ecchHHHHHHH
Q 016641 271 I-MGNKVAGVAFQNLSGA-ENIGYII-PVPVIKHFITG 305 (385)
Q Consensus 271 ~-~~G~vVGI~s~~~~~~-~~~~~ai-p~~~i~~~l~~ 305 (385)
+ .+|+||||+++..... ...++.+ ..+.+++|+++
T Consensus 159 ~~~~g~lvGI~s~g~~~~~~~~~~~v~~~~~~~~wI~~ 196 (200)
T 2w7s_A 159 LNSKHELIGILYAGSGKDESEKNFGVYFTPQLKEFIQN 196 (200)
T ss_dssp ECTTSCEEEEEEEEC----CCCEEEEECCHHHHHHHHH
T ss_pred ECcCCEEEEEEeccccCCCCccceeeecHHHHHHHHHh
Confidence 9 7999999999975432 3456666 34455555554
No 19
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.87 E-value=7.2e-22 Score=182.46 Aligned_cols=158 Identities=18% Similarity=0.276 Sum_probs=114.1
Q ss_pred ceEEEEEecCCEEEecccccCCCc----eEEEEEcC----CC------cEEEEEEEEecC---CCCeEEEEecCCc----
Q 016641 140 TTGSGFVIPGKKILTNAHVVADST----FVLVRKHG----SP------TKYRAQVEAVGH---ECDLAILIVESDE---- 198 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~----~i~V~~~~----~g------~~~~a~v~~~d~---~~DlAlLkv~~~~---- 198 (385)
..|+||+|+++||||||||+.+.. .+.+.... ++ ..+.++.+..|+ .+||||||++.+.
T Consensus 55 ~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~~~ 134 (242)
T 1agj_A 55 TSATGVLIGKNTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNGVS 134 (242)
T ss_dssp EEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTSCC
T ss_pred ccEEEEEEeCCEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcccc
Confidence 589999999999999999997543 34442211 11 357888888887 8999999998763
Q ss_pred ccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCE
Q 016641 199 FWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNK 275 (385)
Q Consensus 199 ~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~ 275 (385)
+.+.+++++|++.. ..|+.|+++|||.+..........+..... . ..+++++.+|+|||||||+ .+|+
T Consensus 135 ~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~~~------~---~~~~~~~~~c~GdSGGPl~~~~g~ 205 (242)
T 1agj_A 135 LGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELTTL------S---RGLRYYGFTVPGNSGSGIFNSNGE 205 (242)
T ss_dssp HHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEECCG------G---GSEEEECCCCGGGTTCEEECTTSE
T ss_pred ccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEecC------C---ceEEEeCCcCCCCCchHhcccCCE
Confidence 23458899997543 569999999999875432222222221110 0 1256788899999999999 7999
Q ss_pred EEEEEeeecC---CCCceEEEEecc-hHHHHHHHH
Q 016641 276 VAGVAFQNLS---GAENIGYIIPVP-VIKHFITGV 306 (385)
Q Consensus 276 vVGI~s~~~~---~~~~~~~aip~~-~i~~~l~~l 306 (385)
||||++++.. +..+.++++|++ .++++|++.
T Consensus 206 lvGI~s~g~~c~~~~~~~~~~~~i~~~~~~~l~~~ 240 (242)
T 1agj_A 206 LVGIHSSKVSHLDREHQINYGVGIGNYVKRIINEK 240 (242)
T ss_dssp EEEEEEEEEECSSTTCEEEEEEECCHHHHHHHHHH
T ss_pred EEEEEeccccccCcCCCceeeEEehHHHHHHHHhh
Confidence 9999998764 235689999996 788887763
No 20
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.85 E-value=4e-21 Score=172.39 Aligned_cols=169 Identities=24% Similarity=0.371 Sum_probs=119.5
Q ss_pred CCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCc---eEEEEEc---CCCcEEE-EEEEEecCCCCeEEEEecCCc-
Q 016641 127 NYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADST---FVLVRKH---GSPTKYR-AQVEAVGHECDLAILIVESDE- 198 (385)
Q Consensus 127 ~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~---~i~V~~~---~~g~~~~-a~v~~~d~~~DlAlLkv~~~~- 198 (385)
...+||+... ....|+||+|+++||||||||+.+.. .+.+... .++..+. .+++.++..+||||||++...
T Consensus 10 ~~~~P~~~~~-~~~~c~G~lI~~~~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~ 88 (204)
T 2vid_A 10 TNIFPYTGVV-AFKSATGFVVGKNTILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAI 88 (204)
T ss_dssp TTSTTGGGEE-ECSSCEEEEEETTEEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEE
T ss_pred CCcCchhheE-EeeeEEEEEEECCEEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccc
Confidence 3456787632 23579999999999999999998654 5555321 2455666 567777889999999998631
Q ss_pred --------ccccceeeecCCcccCCCeEEEEecCCCCCC---ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCC
Q 016641 199 --------FWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSG 267 (385)
Q Consensus 199 --------~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~---~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 267 (385)
+.+.++|++|++....|+.++++|||.+... .....|.++.... ..++.+...|+||||
T Consensus 89 ~~~~~~~~~~~~v~pi~l~~~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~~----------~~~~~~~~~~~GdSG 158 (204)
T 2vid_A 89 ERGPKGFNFNDNVTPFKYAAGAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVEG----------SSIVYSAHTESGNSG 158 (204)
T ss_dssp EEETTEEEHHHHCCCCCBCSCCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEET----------TEEEECCCCCGGGTT
T ss_pred ccccccccccccccccccCCcCCCCCEEEEEeCCCCCCCCcceEeeccEEeeccC----------CeEEEecccCCCCcc
Confidence 2234678888765567999999999986542 2355666665321 246788899999999
Q ss_pred ccee-eCCEEEEEEeeecC--CCCceEEEE-ecchHHHHHHHH
Q 016641 268 GPAI-MGNKVAGVAFQNLS--GAENIGYII-PVPVIKHFITGV 306 (385)
Q Consensus 268 GPL~-~~G~vVGI~s~~~~--~~~~~~~ai-p~~~i~~~l~~l 306 (385)
|||+ .+|+||||+++... .....+|.+ +...+++++++.
T Consensus 159 GPl~~~~g~lvGI~s~g~~~~~~~~~~~~~~~~~~~~~wI~~~ 201 (204)
T 2vid_A 159 SPVLNSNNELVGIHFASDVKNDDNRNAYGVYFTPEIKKFIAEN 201 (204)
T ss_dssp CEEECTTSCEEEEEEEECC---CCCCEEEECCCHHHHHHHHHH
T ss_pred CcEECCCCeEEEEEecCccCCCcccccceeEeCHHHHHHHHhh
Confidence 9999 79999999998753 234456655 335566666654
No 21
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.85 E-value=4.4e-20 Score=173.79 Aligned_cols=157 Identities=24% Similarity=0.312 Sum_probs=115.4
Q ss_pred ceEEEEEecCCEEEecccccCCCc----eEEEEEc-------CCCcEEEEEEEEecCCCCeEEEEecCCc----ccccce
Q 016641 140 TTGSGFVIPGKKILTNAHVVADST----FVLVRKH-------GSPTKYRAQVEAVGHECDLAILIVESDE----FWEGMH 204 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~----~i~V~~~-------~~g~~~~a~v~~~d~~~DlAlLkv~~~~----~~~~~~ 204 (385)
..|+||+|+++||||||||+.+.. .+.|++. .++.....+++.++..+||||||++... +...++
T Consensus 34 ~~C~G~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v~ 113 (274)
T 2o8l_A 34 FIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVVK 113 (274)
T ss_dssp EEEEEEEEETTEEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTSSC
T ss_pred EEEEEEEEECCEEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCcccccccccccc
Confidence 579999999999999999997643 3777542 1344555677777888999999998752 445789
Q ss_pred eeecCCcc--cCCCeEEEEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEE
Q 016641 205 FLELGDIP--FLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGV 279 (385)
Q Consensus 205 ~l~l~~~~--~~G~~V~~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI 279 (385)
+++|+... ..|+.|+++|||.+... .....|.++.... .+++.++..|+|+|||||+ .+|+||||
T Consensus 114 pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvGI 183 (274)
T 2o8l_A 114 PATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIGI 183 (274)
T ss_dssp CCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESCCCCTTCTTCEEECTTSCEEEE
T ss_pred cccccccccccCCCEEEEEECCCCCCCceEEecCceEEecCC----------CeEEeCcccCCCCchhheeccCCeEEEE
Confidence 99998643 56999999999976432 2345666654321 2467889999999999999 79999999
Q ss_pred EeeecCCCCceEEEEecchHHHHHHHHH
Q 016641 280 AFQNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 280 ~s~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
++++.....+.++.+ ...++.|+++..
T Consensus 184 vS~G~~~~~~~~~~~-~~~~~~wI~~~i 210 (274)
T 2o8l_A 184 HWGGVPNEFNGAVFI-NENVRNFLKQNI 210 (274)
T ss_dssp EEEEETTTEEEEEEC-CHHHHHHHHHHC
T ss_pred EeCcccCCCCceEEe-cHHHHHHHHHHH
Confidence 999765333445555 355666666554
No 22
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.84 E-value=6e-20 Score=172.35 Aligned_cols=158 Identities=24% Similarity=0.319 Sum_probs=115.8
Q ss_pred cceEEEEEecCCEEEecccccCCCc----eEEEEEc-------CCCcEEEEEEEEecCCCCeEEEEecCCc----ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADST----FVLVRKH-------GSPTKYRAQVEAVGHECDLAILIVESDE----FWEGM 203 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~----~i~V~~~-------~~g~~~~a~v~~~d~~~DlAlLkv~~~~----~~~~~ 203 (385)
...|+||+|+++||||||||+.+.. .+.|++. .+++....+++.++..+||||||++... +...+
T Consensus 33 ~~~CgG~lI~~~~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (268)
T 1wcz_A 33 TFIASGVVVGKDTLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (268)
T ss_dssp EEEEEEEECSSSEEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHHS
T ss_pred CEEEEEEEEECCEEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCccccccccccc
Confidence 3679999999999999999997543 3777642 1344455677777888999999998763 34468
Q ss_pred eeeecCCcc--cCCCeEEEEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEE
Q 016641 204 HFLELGDIP--FLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAG 278 (385)
Q Consensus 204 ~~l~l~~~~--~~G~~V~~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVG 278 (385)
++++|+... ..|+.|+++|||.+... .....|+++.... .+++.++..|+|+|||||+ .+|+|||
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~~----------~~i~~~~~~c~GdSGGPLv~~~g~lvG 182 (268)
T 1wcz_A 113 KPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLKG----------EAMQYDLSTTGGNSGSPVFNEKNEVIG 182 (268)
T ss_dssp CCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEET----------TEEEESBCCCTTCTTCEEECTTSCEEE
T ss_pred ceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeCC----------CeEEEecccCCCCccCeEEccCCEEEE
Confidence 889997643 56999999999976432 3445666664321 2467889999999999999 7999999
Q ss_pred EEeeecCCCCceEEEEecchHHHHHHHHH
Q 016641 279 VAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 279 I~s~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
|++++.....+.++++. ..++.++++..
T Consensus 183 IvS~G~~~~~~~~~~~~-~~~~~wI~~~i 210 (268)
T 1wcz_A 183 IHWGGVPNEFNGAVFIN-ENVRNFLKQNI 210 (268)
T ss_dssp EEEEEETTTEEEEEECC-HHHHHHHHHHC
T ss_pred EEeCCccCCcceeEEcC-HHHHHHHHHHH
Confidence 99987653334556663 55667776654
No 23
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.81 E-value=3.5e-19 Score=159.52 Aligned_cols=152 Identities=17% Similarity=0.140 Sum_probs=114.7
Q ss_pred EEEEEecC---CEEEecccccCCCceEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCc-ccccce----eeecCC--
Q 016641 142 GSGFVIPG---KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDE-FWEGMH----FLELGD-- 210 (385)
Q Consensus 142 GSGfiI~~---g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d-~~~DlAlLkv~~~~-~~~~~~----~l~l~~-- 210 (385)
.+||++.+ +|||||+||+++...+. . + ..+.++++..| +..|+||||++... ....+. .+.+..
T Consensus 18 T~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~-~-~~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~ 92 (198)
T 2h5c_A 18 SVGFSVTRGATKGFVTAGHCGTVNATAR---I-G-GAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGST 92 (198)
T ss_dssp ECCEEEEETTEEEEEECGGGCCTTCEEE---E-T-TEEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCC
T ss_pred CcCEEEecCCeeEEEECcccCCCCCEEE---e-C-CcEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCcc
Confidence 45999974 59999999999888776 2 4 37889999999 99999999998753 111111 123332
Q ss_pred cccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeec-C---
Q 016641 211 IPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNL-S--- 285 (385)
Q Consensus 211 ~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~-~--- 285 (385)
..++|+.|..+|+|.+ ++.|+|+.+++...........++++++.+++|||||||+ .+|++|||+++.. .
T Consensus 93 ~~~vG~~V~~~G~~tg-----~t~G~V~~~~~~~~~~~g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~~ 167 (198)
T 2h5c_A 93 EAAVGAAVCRSGRTTG-----YQCGTITAKNVTANYAEGAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSNG 167 (198)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTTS
T ss_pred cCCCCCeEEEeecCcc-----eEEEEEEeeeeEEEeCCCeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccCC
Confidence 3467999999999864 6789999887654332223446899999999999999999 9999999999874 2
Q ss_pred C------CCceEEEEecchHHHHH
Q 016641 286 G------AENIGYIIPVPVIKHFI 303 (385)
Q Consensus 286 ~------~~~~~~aip~~~i~~~l 303 (385)
+ ..+.+|++|++.+++.+
T Consensus 168 ~~c~~~~~~g~~f~~Pi~~vl~~~ 191 (198)
T 2h5c_A 168 NNCGIPASQRSSLFERLQPILSQY 191 (198)
T ss_dssp BSTTSCGGGCCEEEEEHHHHHHHH
T ss_pred CccccccCCceEEEEEHHHHHHHC
Confidence 1 12689999988876554
No 24
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.79 E-value=3.3e-20 Score=171.87 Aligned_cols=144 Identities=19% Similarity=0.236 Sum_probs=103.0
Q ss_pred cceEEEEEecCCEEEecccccCCCc----eEEEEEcC--C---------CcEEEEEEEEecC---CCCeEEEEecCCc--
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADST----FVLVRKHG--S---------PTKYRAQVEAVGH---ECDLAILIVESDE-- 198 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~----~i~V~~~~--~---------g~~~~a~v~~~d~---~~DlAlLkv~~~~-- 198 (385)
...|+||+|+++||||||||+.+.. .+.+.... . ...+.++.+..|+ .+||||||++.+.
T Consensus 47 ~~~c~G~lI~~~~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~~ 126 (246)
T 1qtf_A 47 STLATGVLIGKNTIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEKG 126 (246)
T ss_dssp TEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CceEEEEEEECCEEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCccc
Confidence 3689999999999999999997543 46665421 1 1468888888888 8999999998763
Q ss_pred --ccccceeeecCCcc--cCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eC
Q 016641 199 --FWEGMHFLELGDIP--FLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MG 273 (385)
Q Consensus 199 --~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~ 273 (385)
+.+.+++++|++.. ..|+.|+++|||.+..........+.... .+++++.+|+|+|||||+ .+
T Consensus 127 ~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~~~~------------~~~~~~~~~~GdSGGPlv~~~ 194 (246)
T 1qtf_A 127 ESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIEMFN------------DSQYFGYTEVGNSGSGIFNLK 194 (246)
T ss_dssp CCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEEESS------------SSBEESCCCGGGTTCEEECTT
T ss_pred cccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeeeecC------------cEEEeCCCCCCCchhheECCC
Confidence 33458889998543 56999999999987553111111111110 124566789999999999 79
Q ss_pred CEEEEEEeeecCCCCceEEEEecchH
Q 016641 274 NKVAGVAFQNLSGAENIGYIIPVPVI 299 (385)
Q Consensus 274 G~vVGI~s~~~~~~~~~~~aip~~~i 299 (385)
|+||||++++.. ++++|++.+
T Consensus 195 g~lvGI~s~g~~-----~~~ipi~~~ 215 (246)
T 1qtf_A 195 GELIGIHSGKGG-----QHNLPIGVF 215 (246)
T ss_dssp CCEEEEEEEEET-----TTTEEEEEE
T ss_pred CEEEEEEecccc-----Cccccchhh
Confidence 999999998643 356676544
No 25
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.78 E-value=2.9e-18 Score=151.85 Aligned_cols=158 Identities=18% Similarity=0.200 Sum_probs=111.1
Q ss_pred ceEE-EEEec---CCEEEecccccCCCceEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecC-C-cccccceeeecCC--
Q 016641 140 TTGS-GFVIP---GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVES-D-EFWEGMHFLELGD-- 210 (385)
Q Consensus 140 ~~GS-GfiI~---~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d-~~~DlAlLkv~~-~-~~~~~~~~l~l~~-- 210 (385)
..|| ||++. ++|||||+||+.+...+.+... +... .+++...+ +.+||||||++. + .+.+.++++++..
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~-~~~~-~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~ 89 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSA-RTTV-LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAA 89 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESSTT-SCSE-EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEEC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecCC-CceE-eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCcc
Confidence 4677 99996 4699999999999888777542 3333 35556666 889999999987 3 3344567777763
Q ss_pred cccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCC-ceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecC--CC
Q 016641 211 IPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGA-TQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS--GA 287 (385)
Q Consensus 211 ~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~-~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~--~~ 287 (385)
....|+.+.++||+.+ .+.+.+..+......... .....++.+...|+|||||||+.+++++||+++... ..
T Consensus 90 ~~~~g~~v~~~Gw~~~-----~~~g~l~~~~~~v~~~~~~~~~~~~~~~~cac~GDSGGPlv~~~~~vGI~s~g~~~~~~ 164 (185)
T 2qa9_E 90 NATVGMAVTRRGSTTG-----THSGSVTALNATVNYGGGDVVYGMIRTNVCAEPGDSGGPLYSGTRAIGLTSGGSGNCSS 164 (185)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECSTTCEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEETTT
T ss_pred cCCCCCEEEEecCCCc-----eeEeEEEEEEEEEEcCCCCEEeceEEecccCCCCCccceEEECCEEEEEEEecCCCCCC
Confidence 3356999999999753 345666655432211111 122356777778999999999955699999998653 22
Q ss_pred CceEEEEecchHHHHHH
Q 016641 288 ENIGYIIPVPVIKHFIT 304 (385)
Q Consensus 288 ~~~~~aip~~~i~~~l~ 304 (385)
...+++.|++.++++++
T Consensus 165 ~~p~vyt~v~~~~~wI~ 181 (185)
T 2qa9_E 165 GGTTFFQPVTEALSAYG 181 (185)
T ss_dssp EEEEEEEEHHHHHHHHT
T ss_pred CCcEEEEEHHHHHHhhC
Confidence 35789999888877764
No 26
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.77 E-value=1.3e-17 Score=148.25 Aligned_cols=151 Identities=18% Similarity=0.147 Sum_probs=112.1
Q ss_pred eEEEEEec--CC--EEEecccccCCCceEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCc-ccccc------eeeec
Q 016641 141 TGSGFVIP--GK--KILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDE-FWEGM------HFLEL 208 (385)
Q Consensus 141 ~GSGfiI~--~g--~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d-~~~DlAlLkv~~~~-~~~~~------~~l~l 208 (385)
-.+||++. +| |||||+||+++...+. .. | +.+++++.| +.+|+||||++... ....+ .++++
T Consensus 15 CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v~--~~-d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 15 CSVGFAATNASGQPGFVTAGHCGSVGTQVS--IG-N---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EECCEEEECTTCCEEEEECGGGCCTTCEEE--ET-T---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred EecCEEEEeCCCCEEEEECcccCCCCCEEE--ec-C---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 45699995 77 9999999998766553 33 4 889999999 99999999998653 11111 12345
Q ss_pred CC--cccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecC-
Q 016641 209 GD--IPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS- 285 (385)
Q Consensus 209 ~~--~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~- 285 (385)
.. .+.+|+.|..+|++.+ .+.|+|+.+++...........+++++....+|||||||+.+|+++||+++...
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG-----~t~G~v~~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~~~~~vGi~s~~~~~ 163 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG-----WYCGTIQARNQTVSYPQGTVHSLTRTSVCAEPGDSGGSFISGTQAQGVTSGGSGN 163 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC-----eEEEEEEEEeeEEEeCCCcEeeeEeeeeecCCCCccceEEECCEEEEEEeccCCC
Confidence 54 3467999999999865 577899888765432222233577888888899999999988999999998653
Q ss_pred -CCCceEEEEecchHHHH
Q 016641 286 -GAENIGYIIPVPVIKHF 302 (385)
Q Consensus 286 -~~~~~~~aip~~~i~~~ 302 (385)
...+.+|++|++.+++.
T Consensus 164 ~~~~~~~~~~pi~~~l~~ 181 (188)
T 2oua_A 164 CRTGGTTFYQEVNPMLNS 181 (188)
T ss_dssp TTTEEEEEEEESHHHHHH
T ss_pred CCCCCceEEEEHHHHHHH
Confidence 33467999998877654
No 27
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.77 E-value=4.8e-18 Score=150.87 Aligned_cols=153 Identities=18% Similarity=0.161 Sum_probs=110.5
Q ss_pred eEE-EEEecC---CEEEecccccCCCceEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCcccccceeee--------
Q 016641 141 TGS-GFVIPG---KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDEFWEGMHFLE-------- 207 (385)
Q Consensus 141 ~GS-GfiI~~---g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d-~~~DlAlLkv~~~~~~~~~~~l~-------- 207 (385)
.|| ||++++ +|||||+||+++...+.+ . ++....+++...+ +.+|+||||++.... ..+.+.
T Consensus 13 ~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~~--~-~~~~~~g~~~~~~~~~~DiAlikl~~~~~--~~~~v~~~~g~~~~ 87 (187)
T 1hpg_A 13 RCSAAFNVTKGGARYFVTAGHCTNISANWSA--S-SGGSVVGVREGTSFPTNDYGIVRYTDGSS--PAGTVDLYNGSTQD 87 (187)
T ss_dssp EEECCEEEEETTEEEEEECHHHHTTCSEEES--S-TTCCEEEEEEEEECSBSCEEEEEECSSCC--CCSEEECSSSCEEE
T ss_pred cCcceEEEEECCeeEEEECcccCCCCCeEEe--C-CCceeEEEEeCccCCCCCEEEEEeCCCCC--cCceEEecCCceee
Confidence 455 999973 499999999998877653 2 5444456666555 788999999987421 112233
Q ss_pred cC--CcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecC
Q 016641 208 LG--DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS 285 (385)
Q Consensus 208 l~--~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~ 285 (385)
+. ..+.+|+.|.++|++.+ .+.|+|+.+++...........++++++.+++|||||||+.++++|||+++...
T Consensus 88 i~~~~~~~~G~~v~~~G~~~g-----~t~G~v~~~~~~v~~~~~~~~~~i~t~~~~~~GdSGgpl~~~~~~vGi~s~~~~ 162 (187)
T 1hpg_A 88 ISSAANAVVGQAIKKSGSTTK-----VTSGTVTAVNVTVNYGDGPVYNMVRTTACSAGGDSGGAHFAGSVALGIHSGSSG 162 (187)
T ss_dssp CCEECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEECCCCCTTCTTCEEEETTEEEEEEEEESC
T ss_pred eccccCCCCCCEEEEEEcCCC-----EeEEEEEEeEEEEEeCCCeEeeeEEeccccCCCCCCCeEEECCEEEEEEEeeCC
Confidence 33 23467999999999864 577899888765432222344679999999999999999966799999998643
Q ss_pred --CCCceEEEEecchHHHHH
Q 016641 286 --GAENIGYIIPVPVIKHFI 303 (385)
Q Consensus 286 --~~~~~~~aip~~~i~~~l 303 (385)
...+.+|++|++.+++.+
T Consensus 163 ~~~~~~~~~~~~i~~~~~~l 182 (187)
T 1hpg_A 163 CSGTAGSAIHQPVTEALSAY 182 (187)
T ss_dssp CBTTBCCCEEEEHHHHHHHH
T ss_pred CCCCCCceEEEEHHHHHHHc
Confidence 223688999988776544
No 28
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.75 E-value=2.3e-17 Score=146.53 Aligned_cols=149 Identities=17% Similarity=0.242 Sum_probs=108.5
Q ss_pred eE-EEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCc-ccccce-----eeecCCc-
Q 016641 141 TG-SGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDE-FWEGMH-----FLELGDI- 211 (385)
Q Consensus 141 ~G-SGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d-~~~DlAlLkv~~~~-~~~~~~-----~l~l~~~- 211 (385)
.| +||++++ +||||+||+++...+. .. + +++++.| +.+|+||||++... +...+. ++++...
T Consensus 16 ~CT~Gf~~~~-~ilTa~Hc~~~~~~v~--~~-d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~ 86 (189)
T 2ea3_A 16 RCSIGFAVNG-GFITAGHCGRTGATTA--NP-T-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHT 86 (189)
T ss_dssp EEECCEEETT-EEEECGGGCCTTCEEE--TT-T-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCC
T ss_pred CCccCEEccC-eEEEchhcCCCCCEEE--eC-C-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCc
Confidence 44 4899876 9999999999887654 32 4 7788888 89999999998753 111222 4456543
Q ss_pred -ccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecC--CCC
Q 016641 212 -PFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS--GAE 288 (385)
Q Consensus 212 -~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~--~~~ 288 (385)
..+|+.|..+|++.+ .+.|+|+.+++...........+++++..+.+|||||||+.+|+++||+++... ...
T Consensus 87 ~~~vG~~v~~~G~~tG-----~t~G~Vs~~~~~v~~~~~~~~~~~~~~~~~~~GDSGgpl~~~~~~vGi~s~~~~~c~~~ 161 (189)
T 2ea3_A 87 AAPVGSAVCRSGSTTG-----WHCGTITALNSSVTYPEGTVRGLIRTTVCAEPGDSGGSLLAGNQAQGVTSGGSGNCRTG 161 (189)
T ss_dssp CCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEETTTE
T ss_pred CCCCCCEEEEEEeCCc-----cEEEEEEecceEEEeCCccCcceEEeeeeccCCCccCeEEECCEEEEEEeecCCCCCCC
Confidence 367999999999864 567888877665422222233568888888899999999988999999998643 234
Q ss_pred ceEEEEecchHHHHH
Q 016641 289 NIGYIIPVPVIKHFI 303 (385)
Q Consensus 289 ~~~~aip~~~i~~~l 303 (385)
+.+|++|++.+++.+
T Consensus 162 ~~~~~~pi~~~l~~~ 176 (189)
T 2ea3_A 162 GTTFFQPVNPILQAY 176 (189)
T ss_dssp EEEEEEEHHHHHHHH
T ss_pred CcEEEEEHHHHHHHC
Confidence 689999977665443
No 29
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.71 E-value=8.8e-17 Score=142.41 Aligned_cols=150 Identities=18% Similarity=0.194 Sum_probs=108.3
Q ss_pred ceEE-EEEecC---CEEEecccccCCCceEEEEEcCCCcEEEEEEEEec-CCCCeEEEEecCCc-ccccce-----eeec
Q 016641 140 TTGS-GFVIPG---KKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVG-HECDLAILIVESDE-FWEGMH-----FLEL 208 (385)
Q Consensus 140 ~~GS-GfiI~~---g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d-~~~DlAlLkv~~~~-~~~~~~-----~l~l 208 (385)
..|| ||++.+ +|||||+||+++++.+.+ +.++++..| +..|+||||++... ....+. ++++
T Consensus 14 ~~CT~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~--------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i 85 (186)
T 2pfe_A 14 YRCSIGFSVRQGSQTGFATAGHCGSTGTRVSS--------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTV 85 (186)
T ss_dssp EEEECCEEEEETTEEEEEECGGGCCTTCEEBT--------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEEC
T ss_pred CcEEeeEEEEcCCeeEEEEChhhCCCCCEEEE--------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEec
Confidence 3455 999963 599999999998877664 457778887 89999999998753 111121 3344
Q ss_pred CC--cccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecC-
Q 016641 209 GD--IPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS- 285 (385)
Q Consensus 209 ~~--~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~- 285 (385)
.. .+.+|++|..+|++.+ .+.|+|+.+++...........+++++....+|||||||+.+|+++||+++...
T Consensus 86 ~~~~~~~vG~~vc~~G~~tG-----~t~G~vs~~~~tv~~~~~~~~~~~~~~~c~~~GDSGgpl~~~~~~vGi~s~g~~~ 160 (186)
T 2pfe_A 86 TGSQEAATGSSVCRSGATTG-----WRCGTIQSKNQTVRYAEGTVTGLTRTTACAEGGDSGGPWLTGSQAQGVTSGGTGD 160 (186)
T ss_dssp CBCCCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEEETTEEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEE
T ss_pred CCCCCCCCCCeEEEEEeCCc-----eEEEEEEEEeeeEEeCCceEeceEeccEEecCCCccCeEEECCEEEEEEeecCCC
Confidence 43 3467999999999865 567888888765432222233567777777899999999988999999998653
Q ss_pred -CCCceEEEEecchHHHH
Q 016641 286 -GAENIGYIIPVPVIKHF 302 (385)
Q Consensus 286 -~~~~~~~aip~~~i~~~ 302 (385)
...+.+|++|++.+.+.
T Consensus 161 c~~~~~~~~~pi~~~l~~ 178 (186)
T 2pfe_A 161 CRSGGITFFQPINPLLSY 178 (186)
T ss_dssp TTTEEEEEEEEHHHHHHH
T ss_pred CCCCCcEEEEEHHHHHHH
Confidence 23457999997766544
No 30
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.70 E-value=5.7e-17 Score=143.01 Aligned_cols=150 Identities=19% Similarity=0.221 Sum_probs=101.1
Q ss_pred ceEE-EEEec---CCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCc-ccccceee-----ecC
Q 016641 140 TTGS-GFVIP---GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDE-FWEGMHFL-----ELG 209 (385)
Q Consensus 140 ~~GS-GfiI~---~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~-~~~~~~~l-----~l~ 209 (385)
..|| ||+|. ++|||||+||+.+...+.+... + ....+.+||||||++.+. +.+.++++ .+.
T Consensus 12 ~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~-~--------~~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 12 SRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTR-T--------GTSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp EEEECCEEEEETTEEEEEECHHHHTTCSEETTEEE-E--------EEECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCceeecce-e--------CCcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 4677 99997 4699999999987665533322 1 123367899999998742 22234443 222
Q ss_pred --CcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCc-eeeEEEecccCCCCCCCcceeeCCEEEEEEeeecC-
Q 016641 210 --DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGAT-QLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLS- 285 (385)
Q Consensus 210 --~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~-~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~- 285 (385)
..+..|+.|.++|++.+ .+.|.++..++........ ....++++...++|||||||+.++++|||+++...
T Consensus 83 ~~~~~~~G~~v~~~G~~~~-----~t~G~v~~~~~~v~~~~~~~~~~~i~~~~c~~~GDSGGPlv~~~~~vGI~s~g~~~ 157 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG-----LRSGSVTGLNATVNYGSSGIVYGMIQTNVCAQPGDSGGSLFAGSTALGLTSGGSGN 157 (181)
T ss_dssp EECCCCTTCEEEEEETTTE-----EEEEEEEEEEEEEECGGGCEEEEEEEESCCCCTTCTTCEEEETTEEEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC-----ccEEEEEEeEEEEECCCCCEEeeeEecccccCCCCCCCEEEECCEEEEEEEeeCCC
Confidence 33467999999998854 3556666654332111111 23457788888999999999966699999998753
Q ss_pred -CCCceEEEEecchHHHHH
Q 016641 286 -GAENIGYIIPVPVIKHFI 303 (385)
Q Consensus 286 -~~~~~~~aip~~~i~~~l 303 (385)
...+.+++.|++.+++++
T Consensus 158 ~~~~~~~v~~~v~~~~~~l 176 (181)
T 2sga_A 158 CRTGGTTFYQPVTEALSAY 176 (181)
T ss_dssp TTTEEEEEEEEHHHHHHHH
T ss_pred CcCCCceEEEEHHHHHHhc
Confidence 223578999988877665
No 31
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.68 E-value=1.2e-15 Score=139.26 Aligned_cols=170 Identities=18% Similarity=0.204 Sum_probs=109.9
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcCC--------CcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS--------PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~--------g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.....+.|++... .+.+..+.+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (228)
T 1fxy_A 24 EGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMN 103 (228)
T ss_dssp CEEEEEEECSSSEEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred CeeEEEEEeeCCEEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCCc
Confidence 3579999999999999999997656666665311 1234444444443 479999999876 45667
Q ss_pred ceeeecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCc
Q 016641 203 MHFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGG 268 (385)
Q Consensus 203 ~~~l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGG 268 (385)
+.|+.|.... ..|+.+++.||...... ..+...+++...+............+.. ....|.|||||
T Consensus 104 v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 183 (228)
T 1fxy_A 104 VAPASLPTAPPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDSGG 183 (228)
T ss_dssp BCCCCCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCTTC
T ss_pred eeccCCCCCCCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCcccc
Confidence 8999998654 56999999999753211 1122223332222111111111122332 24679999999
Q ss_pred ceeeCCEEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 269 PAIMGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 269 PL~~~G~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
||+.+|+++||++++.. .....+....+....+|+++..+
T Consensus 184 PL~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 225 (228)
T 1fxy_A 184 PVVCNGQLQGVVSWGDGCAQKNKPGVYTKVYNYVKWIKNTIA 225 (228)
T ss_dssp EEEETTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred ceEECCEEEEEEEECCCCCCCCCCEEEEEhHHHHHHHHHHHh
Confidence 99988899999998643 11235677788888888887653
No 32
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.68 E-value=2.1e-15 Score=137.07 Aligned_cols=169 Identities=14% Similarity=0.158 Sum_probs=108.2
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEecC-------CCCeEEEEecCC-ccccccee
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHF 205 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~~ 205 (385)
..|+|.+|++.||||+|||+.+...+.+... ...+.+..+-+..++ .+||||||++.+ .+.+.+.|
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~p 102 (222)
T 1hj8_A 23 HFCGGSLVNENWVVSAAHCYKSRVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTYVQP 102 (222)
T ss_dssp EEEEEEEEETTEEEECGGGCCSSCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSSCCC
T ss_pred cEEEeEEecCCEEEECHHhcCCCeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCceec
Confidence 5799999999999999999975433333211 123344554444443 479999999876 45567889
Q ss_pred eecCCcc-cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCcceee
Q 016641 206 LELGDIP-FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGPAIM 272 (385)
Q Consensus 206 l~l~~~~-~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGPL~~ 272 (385)
+.|.... ..|+.+++.||...... ......+++...+............+.. ....|.|||||||+.
T Consensus 103 icL~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~ 182 (222)
T 1hj8_A 103 VALPTSCAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGGPVVC 182 (222)
T ss_dssp CBCCSSCCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTCEEEE
T ss_pred cCCCCCCCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCcccceEE
Confidence 9998654 56999999999754221 1122222322222111111111122333 235799999999998
Q ss_pred CCEEEEEEeeecC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 273 GNKVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 273 ~G~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
+|+++||++++.. + ....+....+...++++++..+
T Consensus 183 ~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~~~WI~~~~~ 220 (222)
T 1hj8_A 183 NGELQGVVSWGYGCAEPGNPGVYAKVCIFNDWLTSTMA 220 (222)
T ss_dssp TTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCEEEEEEeecCCCCCCCcCcEEEEhHHhHHHHHHHhh
Confidence 8999999998653 1 1235677888888888887653
No 33
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.67 E-value=2.7e-15 Score=136.09 Aligned_cols=169 Identities=14% Similarity=0.154 Sum_probs=109.8
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEecC-------CCCeEEEEecCC-ccccccee
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHF 205 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~~ 205 (385)
..|+|.+|++.||||+|||+.+...+.+... ...+.+..+-+..++ .+||||||++.+ .+.+.+.|
T Consensus 23 ~~C~GtLI~~~~VLTAAhC~~~~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~v~p 102 (223)
T 4i8h_A 23 HFCGGSLINSQWVVSAAHCYKSGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRVAS 102 (223)
T ss_dssp EEEEEEECSSSEEEECGGGCCSSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCC
T ss_pred cEEEEEEEcCCEEEecHHhCCCCcEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCceec
Confidence 4699999999999999999986544444321 122344554455554 479999999876 45667899
Q ss_pred eecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCccee
Q 016641 206 LELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGPAI 271 (385)
Q Consensus 206 l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGPL~ 271 (385)
+.|.... ..|+.+++.||...... ..+...+++...+............+.. ....|.|||||||+
T Consensus 103 i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~ 182 (223)
T 4i8h_A 103 ISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGPVV 182 (223)
T ss_dssp CBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCEEE
T ss_pred eECCCCCCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCCCCcEE
Confidence 9998654 56999999999753221 1122223322222111111111122333 24678999999999
Q ss_pred eCCEEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 272 MGNKVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 272 ~~G~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
.+++++||+++... .....+....+...++|+++..+
T Consensus 183 ~~~~l~Gi~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~ 221 (223)
T 4i8h_A 183 CSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp ETTEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred ECCEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 88899999998654 12235777888888888887664
No 34
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.67 E-value=3.8e-15 Score=136.45 Aligned_cols=167 Identities=14% Similarity=0.150 Sum_probs=108.2
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC------------------CCCeEEEE
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH------------------ECDLAILI 193 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~------------------~~DlAlLk 193 (385)
..|+|.+|++.||||+|||+.+. +.|.+.. ..+.+..+-+..++ .+||||||
T Consensus 22 ~~CgGsLIs~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~ 99 (235)
T 1ton_A 22 YLCGGVLIDPSWVITAAHCYSNN--YQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLLH 99 (235)
T ss_dssp SEEEEEEEETTEEEECGGGCCSC--CEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTCCEEEE
T ss_pred CeEEEEEecCCEEEEcHHhCCCC--cEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCCEEEEE
Confidence 57999999999999999999643 3444321 12333343333332 35999999
Q ss_pred ecCC-cccccceeeecCCcc-cCCCeEEEEecCCCCC--------CceEEEeeEeecccccccCCCceeeEEEe-----c
Q 016641 194 VESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGD--------NISVTKGVVSRVEPTQYVHGATQLMAIQI-----D 258 (385)
Q Consensus 194 v~~~-~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~--------~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d 258 (385)
++.+ .+.+.+.|+.|.... ..|+.+++.||..... ...+...+++...+............+.. .
T Consensus 100 L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 179 (235)
T 1ton_A 100 LSEPADITGGVKVIDLPTKEPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEMEGG 179 (235)
T ss_dssp ESSCCCCCSSCCCCCCCCSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTTCS
T ss_pred cCCccccCCcceeeeCCCCCCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCCCC
Confidence 9876 456678999998654 5699999999975321 01233334443333221111111122332 2
Q ss_pred ccCCCCCCCcceeeCCEEEEEEeeecCCC---CceEEEEecchHHHHHHHHHH
Q 016641 259 AAINPGNSGGPAIMGNKVAGVAFQNLSGA---ENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 259 ~~i~~G~SGGPL~~~G~vVGI~s~~~~~~---~~~~~aip~~~i~~~l~~l~~ 308 (385)
...|.|||||||+.+|.++||++++..+. ...+....+...++|+++..+
T Consensus 180 ~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 232 (235)
T 1ton_A 180 KDTCAGDSGGPLICDGVLQGITSGGATPCAKPKTPAIYAKLIKFTSWIKKVMK 232 (235)
T ss_dssp CBCCTTCTTCEEEETTEEEEEECCCCSSCSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CcCCCCCCccccEECCEEEEEEeeCCCCCCCCCCCeEEEEHHHHHHHHHHHHc
Confidence 46799999999998899999999863311 235677888888888887654
No 35
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.67 E-value=2.1e-15 Score=138.28 Aligned_cols=170 Identities=16% Similarity=0.223 Sum_probs=110.5
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEecC------------------CCCeEEEEe
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH------------------ECDLAILIV 194 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d~------------------~~DlAlLkv 194 (385)
...|+|.+|++.||||+|||+.+...+.+... ..++.+..+-+..++ .+||||||+
T Consensus 23 ~~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L 102 (237)
T 2zch_P 23 RAVCGGVLVHPQWVLTAAHCIRNKSVILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLMLLRL 102 (237)
T ss_dssp SEEEEEEEEETTEEEECGGGCCSSCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEEEEE
T ss_pred CeEEEEEEecCCEEEEcHHhcCCCceEEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEEEEe
Confidence 35799999999999999999987655444321 123445554444443 569999999
Q ss_pred cCC-cccccceeeecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCCCceeeEEEe-----cc
Q 016641 195 ESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DA 259 (385)
Q Consensus 195 ~~~-~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~ 259 (385)
+.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+..-+++...+............+.. ..
T Consensus 103 ~~~~~~~~~v~pi~Lp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~ 182 (237)
T 2zch_P 103 SEPAELTDAVKVMDLPTQEPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRWTGGK 182 (237)
T ss_dssp SSCCCCCSSCCCCCCCSSCCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECTTCSC
T ss_pred CCCCccCCcEeeeECCCCCCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEEeecCCCCCC
Confidence 876 456678899998654 56999999999753211 1222333333222111111011112332 24
Q ss_pred cCCCCCCCcceeeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 260 AINPGNSGGPAIMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 260 ~i~~G~SGGPL~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
..|.|||||||+.++.++||++++..+ ....+....+...++|+++..+
T Consensus 183 ~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 234 (237)
T 2zch_P 183 STCSGDSGGPLVCNGVLQGITSWGSEPCALPERPSLYTKVVHYRKWIKDTIV 234 (237)
T ss_dssp BCCTTCTTCEEESSSSEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred cccCCCccCeEEECCEEEEEEEeCcCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 679999999999778999999987531 1235677888888888887664
No 36
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.66 E-value=3e-15 Score=136.28 Aligned_cols=167 Identities=16% Similarity=0.145 Sum_probs=107.6
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
..|+|.+|++.||||+|||+.+. +.|++.. ..+.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 27 ~~CgGsLI~~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v 104 (224)
T 1cgh_A 27 SRCGGFLVREDFVLTAAHCWGSN--INVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRNV 104 (224)
T ss_dssp CEEEEEEEETTEEEECGGGCCSS--EEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEeeCCEEEEhHHhCCCC--CEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCce
Confidence 57999999999999999999874 4444321 13445555454554 369999999876 455678
Q ss_pred eeeecCCcc---cCCCeEEEEecCCCCC---C---ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCcc
Q 016641 204 HFLELGDIP---FLQQAVAVVGYPQGGD---N---ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGP 269 (385)
Q Consensus 204 ~~l~l~~~~---~~G~~V~~iG~p~~~~---~---~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGP 269 (385)
.|+.|.... ..|+.+++.||..... . ..+...+++...+............+.. ....|.||||||
T Consensus 105 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 184 (224)
T 1cgh_A 105 NPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGGP 184 (224)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTCE
T ss_pred EeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCccc
Confidence 999998643 3589999999975321 0 1222223322222111100000012332 246799999999
Q ss_pred eeeCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHH
Q 016641 270 AIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 270 L~~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|+.+|.++||++++.......+....+....+++++..+
T Consensus 185 L~~~~~l~Gi~S~g~~~~~~p~vyt~V~~~~~WI~~~~~ 223 (224)
T 1cgh_A 185 LLCNNVAHGIVSYGKSSGVPPEVFTRVSSFLPWIRTTMR 223 (224)
T ss_dssp EEETTEEEEEEEECCTTCCSCEEEEEGGGGHHHHHHHHH
T ss_pred eEEccEEEEEEEEECCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 998889999999865322335677778888888877653
No 37
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.65 E-value=4.8e-15 Score=134.86 Aligned_cols=169 Identities=16% Similarity=0.151 Sum_probs=107.9
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC-------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~-------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
...|+|.+|++.||||+|||+.+...+.+.... +.+.+..+.+..++ .+||||||++.+ .+.+.+
T Consensus 23 ~~~CgGsLIs~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~~~v 102 (223)
T 2bdg_A 23 ELFCSGVLVHPQWVLSAAHCFQNSYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSESDTI 102 (223)
T ss_dssp CEEEEEEEEETTEEEECGGGCCSSEEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCCSSC
T ss_pred CEEEEEEEecCCEEEEhHHhCCCCeEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCCCce
Confidence 357999999999999999999765444332210 12344554444443 469999999876 455678
Q ss_pred eeeecCCcc-cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCccee
Q 016641 204 HFLELGDIP-FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGPAI 271 (385)
Q Consensus 204 ~~l~l~~~~-~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGPL~ 271 (385)
.|+.|.+.. ..|+.+++.||...... ..+...+++...+............+.. ....|.|||||||+
T Consensus 103 ~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~ 182 (223)
T 2bdg_A 103 RSISIASQCPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSGGPLI 182 (223)
T ss_dssp CCCCBCSSCCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTTCEEE
T ss_pred ecccCCCCCCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCCchhe
Confidence 899998654 56899999999754321 1122223332222111111111123333 23579999999999
Q ss_pred eCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHH
Q 016641 272 MGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 272 ~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~ 307 (385)
.+|.++||++++..+ ....+....+....+|+++..
T Consensus 183 ~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 221 (223)
T 2bdg_A 183 CNGYLQGLVSFGKAPCGQVGVPGVYTNLCKFTEWIEKTV 221 (223)
T ss_dssp ETTEEEEEEEECCSSTTCTTCCEEEECGGGTHHHHHHHH
T ss_pred EccEEEEEEEecCCCCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 888999999986431 123567777888888887754
No 38
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.65 E-value=6.5e-15 Score=133.98 Aligned_cols=167 Identities=14% Similarity=0.144 Sum_probs=107.7
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
..|+|.+|++.||||+|||+.. .+.|++.. +++.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 100 (223)
T 3mfj_A 23 HFCGGSLINSQWVVSAAHCYKS--GIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSRV 100 (223)
T ss_dssp EEEEEEEEETTEEEECGGGCCS--SCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEecCCEEEEhHHhcCC--CcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCCcE
Confidence 5799999999999999999953 34454421 23344554444443 479999999876 456678
Q ss_pred eeeecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCcc
Q 016641 204 HFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGP 269 (385)
Q Consensus 204 ~~l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGP 269 (385)
.|+.|.... ..|+.+++.||...... ..+...+++...+............+.. ....|.||||||
T Consensus 101 ~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 180 (223)
T 3mfj_A 101 ASISLPTSCASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSGGP 180 (223)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTTCE
T ss_pred eeeECCCCCCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCcccc
Confidence 999998654 56999999999754210 1122222322222111111111123333 235799999999
Q ss_pred eeeCCEEEEEEeeecC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 270 AIMGNKVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 270 L~~~G~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|+.+|+++||+++... . ....+....+...++|+++..+
T Consensus 181 L~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~ 221 (223)
T 3mfj_A 181 VVCSGKLQGIVSWGSGCAQKNKPGVYTKVCNYVSWIKQTIA 221 (223)
T ss_dssp EEETTEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHHH
T ss_pred eEECCEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHh
Confidence 9988999999998643 1 1235677888888888877653
No 39
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.65 E-value=3.3e-15 Score=136.05 Aligned_cols=167 Identities=14% Similarity=0.174 Sum_probs=103.3
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEecC----------CCCeEEEEecCC-ccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH----------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d~----------~~DlAlLkv~~~-~~~~~ 202 (385)
..|+|.+|++.||||+|||+.....+.+-.. ..++.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~CgGsLI~~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~~~~ 103 (225)
T 1npm_A 24 LICGGVLVGDRWVLTAAHCKKQKYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANLGDK 103 (225)
T ss_dssp EEEEEEEEETTEEEECGGGCCSSCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCCSSS
T ss_pred eEEEEEEECCCEEEEhHHcCCCCceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCcccCCCc
Confidence 5799999999999999999974433333211 113344444443433 359999999876 45667
Q ss_pred ceeeecCCcc-cCCCeEEEEecCCCCC-----Cce---EEEeeEeecccccccCCCceeeEEEe----cccCCCCCCCcc
Q 016641 203 MHFLELGDIP-FLQQAVAVVGYPQGGD-----NIS---VTKGVVSRVEPTQYVHGATQLMAIQI----DAAINPGNSGGP 269 (385)
Q Consensus 203 ~~~l~l~~~~-~~G~~V~~iG~p~~~~-----~~~---~~~G~Vs~~~~~~~~~~~~~~~~i~~----d~~i~~G~SGGP 269 (385)
+.|+.|.+.. ..|+.+++.||..... ... ....+++...+............+.. ....|.||||||
T Consensus 104 v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgP 183 (225)
T 1npm_A 104 VKPVQLANLCPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGDSGGP 183 (225)
T ss_dssp SCCCEECSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTTCTTCE
T ss_pred eeceECCCCCCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEeecCCCCCeecCCCCCch
Confidence 8999998654 5699999999975311 011 22222322222111111111122332 346799999999
Q ss_pred eeeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHH
Q 016641 270 AIMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 270 L~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l 306 (385)
|+.+|.++||++++..+ ....+....+...++++++.
T Consensus 184 L~~~~~l~GI~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~ 223 (225)
T 1npm_A 184 LVCDGMLQGITSWGSDPCGKPEKPGVYTKICRYTTWIKKT 223 (225)
T ss_dssp EEETTEEEEEEEECCSSSCBTTBCEEEEEHHHHHHHHHHH
T ss_pred heECCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 99889999999986331 12345666666666776654
No 40
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.65 E-value=5.2e-15 Score=135.70 Aligned_cols=168 Identities=13% Similarity=0.062 Sum_probs=107.1
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC------------------CCCeEEE
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH------------------ECDLAIL 192 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~------------------~~DlAlL 192 (385)
...|+|.+|++.||||+|||+.+. +.|.+.. ..+.+..+-+..++ .+|||||
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1ao5_A 23 EHICGGVLLDRNWVLTAAHCYVDQ--YEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLL 100 (237)
T ss_dssp EEEEEEEEEETTEEEECTTCCCSS--CEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEE
T ss_pred CeEEEEEEeeCCEEEECHHHCCCC--CEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEEE
Confidence 357999999999999999999743 3444321 12233333333332 6799999
Q ss_pred EecCC-cccccceeeecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCCCceeeEEEe-----
Q 016641 193 IVESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQI----- 257 (385)
Q Consensus 193 kv~~~-~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~----- 257 (385)
|++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+............+..
T Consensus 101 ~L~~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~ 180 (237)
T 1ao5_A 101 RLSKPADITDVVKPIALPTKEPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMGG 180 (237)
T ss_dssp EESSCCCCCSSSCCCCCCCSCCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTC
T ss_pred EeCCccccCCceeCCCcCCCCCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEEEEccCCC
Confidence 99876 455678899998654 56999999999753211 1222333332222111111111122332
Q ss_pred cccCCCCCCCcceeeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 258 DAAINPGNSGGPAIMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 258 d~~i~~G~SGGPL~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
....|.|||||||+.+|.++||++++..+ ....+....+....+|+++..+
T Consensus 181 ~~~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1ao5_A 181 GKDTCRDDSGGPLICDGILQGTTSYGPVPCGKPGVPAIYTNLIKFNSWIKDTMM 234 (237)
T ss_dssp SCBCCTTCTTCEEEETTEEEEEEEECCSSTTCTTCCEEEECGGGGHHHHHHHHH
T ss_pred CCCCCCCCCcceEEECCEEeEEEeEcCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 23679999999999889999999986321 1235677888888888887653
No 41
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.65 E-value=4e-15 Score=135.63 Aligned_cols=167 Identities=17% Similarity=0.168 Sum_probs=107.4
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
..|+|.+|++.||||+|||+.+. +.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 27 ~~CgGtLI~~~~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 104 (227)
T 1iau_A 27 KRCGGFLIRDDFVLTAAHCWGSS--INVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRAV 104 (227)
T ss_dssp EEEEEEEEETTEEEECGGGCCSE--EEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEEcCCEEEECHHhCCCc--eEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCce
Confidence 57999999999999999999763 4555421 12345555444444 469999999876 455678
Q ss_pred eeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCC-ceeeEEEe-----cccCCCCCCC
Q 016641 204 HFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGA-TQLMAIQI-----DAAINPGNSG 267 (385)
Q Consensus 204 ~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~-~~~~~i~~-----d~~i~~G~SG 267 (385)
.|+.|.... ..|+.+++.||...... ..+...+++...+....... .....+.. ....|.||||
T Consensus 105 ~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 184 (227)
T 1iau_A 105 QPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDSG 184 (227)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred ecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCCC
Confidence 899998644 35899999999753211 11222222222221111100 00012333 2467999999
Q ss_pred cceeeCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHH
Q 016641 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 268 GPL~~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|||+.+|.++||++++.......+....+....+++++..+
T Consensus 185 gPL~~~~~l~Gi~S~gc~~~~~p~vyt~v~~~~~WI~~~~~ 225 (227)
T 1iau_A 185 GPLVCNKVAQGIVSYGRNNGMPPRACTKVSSFVHWIKKTMK 225 (227)
T ss_dssp SEEEETTEEEEEEEEECTTSCSCEEEEEGGGGHHHHHHHHH
T ss_pred chheEeeEEEEEEeEecCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 99998889999999873322335677788888888887654
No 42
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.64 E-value=2.6e-16 Score=135.64 Aligned_cols=125 Identities=19% Similarity=0.198 Sum_probs=94.7
Q ss_pred hCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeE
Q 016641 112 ALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLA 190 (385)
Q Consensus 112 ~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlA 190 (385)
++..||.|... ..+.||||+|+ ++++|||+||+.++....|++ ++++++ +.+++..|+|
T Consensus 2 ~~~n~~~v~g~---------------~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~--~G~~~~---Vgf~~~~DlA 61 (198)
T 1mbm_A 2 ARGNVGFVAGS---------------SYGTGSVWTRNNEVVVLTASHVVGRANMATLKI--GDAMLT---LTFKKNGDFA 61 (198)
T ss_dssp CCTTEEEEESS---------------SEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE--TTEEEE---EECEEETTEE
T ss_pred cccceEEEecc---------------cCCccceEEECCCeEEEEeeeEEccCceEEEEE--CCEEEE---eecccCCcEE
Confidence 56678888863 34789999999 789999999999999999998 778887 6777999999
Q ss_pred EEEe---cCCcccccceeeecCCcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCC
Q 016641 191 ILIV---ESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSG 267 (385)
Q Consensus 191 lLkv---~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 267 (385)
++++ +.+. .+++++|+. +.+|+.- +..+.|.+..+.-. ...++++ .+||||
T Consensus 62 ~l~v~~~~~~g---~~P~l~las-p~vG~a~-----------~~~~tG~~~~l~g~--------~g~l~~t---~PGDSG 115 (198)
T 1mbm_A 62 EAVTTQSELPG---NWPQLHFAQ-PTTGPAS-----------WCTATGDEEGLLSG--------EVCLAWT---TSGDSG 115 (198)
T ss_dssp EEEECTTTSCS---CCCBCCBCC-CCSEEEE-----------EEETTEEEEEEECS--------SCEECCC---CGGGTT
T ss_pred EEEeeccCCCC---CCcccccCC-CcccceE-----------EeeccccEEEEecC--------CceeEcC---CCCCCC
Confidence 9999 4442 567888865 6778722 23445555554310 1346666 789999
Q ss_pred cceeeCCEEEEEEee
Q 016641 268 GPAIMGNKVAGVAFQ 282 (385)
Q Consensus 268 GPL~~~G~vVGI~s~ 282 (385)
||++..++||||+++
T Consensus 116 sPVl~~~~vIGV~T~ 130 (198)
T 1mbm_A 116 SAVVQGDAVVGVHTG 130 (198)
T ss_dssp CEEEETTEEEEEEEE
T ss_pred CccccCCeEEEEEec
Confidence 999943499999998
No 43
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.64 E-value=5.4e-15 Score=134.82 Aligned_cols=170 Identities=11% Similarity=0.091 Sum_probs=107.2
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEc-------CCCcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKH-------GSPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~-------~~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
...|+|.+|++.||||+|||+.+...+.+... .+.+.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 24 ~~~CgGtLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v 103 (227)
T 2psx_A 24 QLYCGAVLVHPQWLLTAAHCRKKVFRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTKDV 103 (227)
T ss_dssp EEEEEEEEEETTEEEECGGGCCSSCEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCCSSS
T ss_pred CceEEEEEEcCCEEEEhHHcCCCCcEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCCCce
Confidence 35799999999999999999986444443211 112344444344443 469999999876 455678
Q ss_pred eeeecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCCCceeeEEEe----cccCCCCCCCcce
Q 016641 204 HFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQI----DAAINPGNSGGPA 270 (385)
Q Consensus 204 ~~l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~----d~~i~~G~SGGPL 270 (385)
.|+.|.... ..|+.+++.||...... ..+...+++...+............+.. ....|.|||||||
T Consensus 104 ~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPL 183 (227)
T 2psx_A 104 RPINVSSHCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDSGGPV 183 (227)
T ss_dssp CCCCBCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCTTCEE
T ss_pred eeeECCCCCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCCCcce
Confidence 899998644 55899999999753211 1122222222222111111111122333 2367999999999
Q ss_pred eeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 271 IMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 271 ~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
+.+|.++||++++..+ ....+....+...++|+++..+
T Consensus 184 ~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 224 (227)
T 2psx_A 184 VCNGSLQGLVSWGDYPCARPNRPGVYTNLCKFTKWIQETIQ 224 (227)
T ss_dssp EETTEEEEEEEECCSSTTCTTCCEEEEEGGGCHHHHHHHHH
T ss_pred eeCCEEEEEEeecCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 9888999999986321 1235677888888888887654
No 44
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.64 E-value=5e-15 Score=136.14 Aligned_cols=169 Identities=14% Similarity=0.092 Sum_probs=103.2
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEec------------------CCCCeEEEEec
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVG------------------HECDLAILIVE 195 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d------------------~~~DlAlLkv~ 195 (385)
..|+|.+|++.||||+|||+.+...+.+... ..++.+..+-+..+ ..+||||||++
T Consensus 27 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl~L~ 106 (240)
T 1sgf_A 27 YQCGGVLLDRNWVLTAAHCYNDKYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLLRLS 106 (240)
T ss_dssp CCEEEEECSSSEEEECGGGCCSCCEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEEEEES
T ss_pred eEEEEEEecCCEEEECHHhCCCCceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEEEEeC
Confidence 5799999999999999999985444443211 11233444333332 24699999998
Q ss_pred CC-cccccceeeecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCCCceeeEEEe-----ccc
Q 016641 196 SD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAA 260 (385)
Q Consensus 196 ~~-~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~ 260 (385)
.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+............+.. ...
T Consensus 107 ~~~~~~~~v~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~ 186 (240)
T 1sgf_A 107 KPADITDVVKPITLPTEEPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMDGGSY 186 (240)
T ss_dssp SCCCCCSSCCCCCCCCSCCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEECSSSEE
T ss_pred CcCcCCCcccccCCCCCCCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccCCCCCC
Confidence 76 456678999998654 56999999999753210 1222333333222111110001112222 235
Q ss_pred CCCCCCCcceeeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 261 INPGNSGGPAIMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 261 i~~G~SGGPL~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
.|.|||||||+.+|.++||++++..+ ....+....+...++|+++..+
T Consensus 187 ~C~GDSGgPL~~~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 237 (240)
T 1sgf_A 187 TCEHDSGGPLICDGILQGITSWGPEPCGEPTEPSVYTKLIKFSSWIRETMA 237 (240)
T ss_dssp ECCCCTTCEEEETTEEEEEECCCCSSCCCSSCCEEEEESGGGHHHHHHHHH
T ss_pred CCCCCCcCcEEEccEEEEEEEECCCCCCCCCCCeEEEeHHHHHHHHHHHHh
Confidence 79999999999889999999986331 1235677888888899888764
No 45
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.64 E-value=9.5e-15 Score=133.43 Aligned_cols=171 Identities=12% Similarity=0.097 Sum_probs=110.4
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC-----CCcEE--EEEEEEecC-------CCCeEEEEecCC-cccccce
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----SPTKY--RAQVEAVGH-------ECDLAILIVESD-EFWEGMH 204 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~-----~g~~~--~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~ 204 (385)
..|+|.+|++.||||+|||+.....+.+.... +.... ..+.+..++ .+||||||++.+ .+.+.+.
T Consensus 26 ~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~ 105 (234)
T 3s9c_A 26 IHCAGALINREWVLTAAHCDRRNIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYSTHIA 105 (234)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTEEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBTTBC
T ss_pred EEEeeEEeeCCEEEEchhhcCCCceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccCCccc
Confidence 46999999999999999999865444443221 11111 222222232 369999999876 4566789
Q ss_pred eeecCCcc-cCCCeEEEEecCCCCC------CceEEEeeEeecccccccC-CCceeeEEEe-----cccCCCCCCCccee
Q 016641 205 FLELGDIP-FLQQAVAVVGYPQGGD------NISVTKGVVSRVEPTQYVH-GATQLMAIQI-----DAAINPGNSGGPAI 271 (385)
Q Consensus 205 ~l~l~~~~-~~G~~V~~iG~p~~~~------~~~~~~G~Vs~~~~~~~~~-~~~~~~~i~~-----d~~i~~G~SGGPL~ 271 (385)
|+.|.... ..|+.+++.||..... .......+++...+..... .......+.. ....|.|||||||+
T Consensus 106 pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPl~ 185 (234)
T 3s9c_A 106 PVSLPSRSRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSGGPLI 185 (234)
T ss_dssp CCBCCSSCCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTTCEEE
T ss_pred ccccCCCCCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCCCeEE
Confidence 99998655 5699999999975321 1233334444333322111 0111122332 34679999999999
Q ss_pred eCCEEEEEEeeecCCC---CceEEEEecchHHHHHHHHHHcC
Q 016641 272 MGNKVAGVAFQNLSGA---ENIGYIIPVPVIKHFITGVVEHG 310 (385)
Q Consensus 272 ~~G~vVGI~s~~~~~~---~~~~~aip~~~i~~~l~~l~~~g 310 (385)
.+++++||+++..... ...+....+...++|+++..+..
T Consensus 186 ~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~~~ 227 (234)
T 3s9c_A 186 CNGEMHGIVAGGSEPCGQHLKPAVYTKVFDYNNWIQSIIAGN 227 (234)
T ss_dssp ETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHTC
T ss_pred EeCCcEEEEEEeCCCCCCCCCCcEEEEhHHhHHHHHHHHcCC
Confidence 8899999999875411 23577888889999999887644
No 46
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.64 E-value=8e-15 Score=133.38 Aligned_cols=168 Identities=20% Similarity=0.205 Sum_probs=108.2
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEecC-------CCCeEEEEecCC-ccccccee
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHF 205 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~~ 205 (385)
..|+|.+|++.||||+|||+.+...+.+-.. ..++.+..+-+..++ .+||||||++.+ .+.+.+.|
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~v~p 103 (223)
T 1lo6_A 24 LLCGGVLIHPLWVLTAAHCKKPNLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSELIQP 103 (223)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTCEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTTBCC
T ss_pred EEEEeEEecCCEEEECccCCCCCeEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCCceee
Confidence 5799999999999999999975444443211 113344444444443 479999999876 45567889
Q ss_pred eecCCcc-cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCcceeeC
Q 016641 206 LELGDIP-FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGPAIMG 273 (385)
Q Consensus 206 l~l~~~~-~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGPL~~~ 273 (385)
++|.... ..|+.+++.||...... ......+++...+............+.. ....|.|||||||+.+
T Consensus 104 i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPL~~~ 183 (223)
T 1lo6_A 104 LPLERDCSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGPLVCG 183 (223)
T ss_dssp CCBCCCTTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCEEEET
T ss_pred cccCCCCCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCCcEEeC
Confidence 9998654 56899999999754210 1222333333222211111111122332 2467999999999988
Q ss_pred CEEEEEEeeecCC---CCceEEEEecchHHHHHHHHH
Q 016641 274 NKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 274 G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~ 307 (385)
|+++||++++..+ ....+....+...++|+++..
T Consensus 184 ~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 220 (223)
T 1lo6_A 184 DHLRGLVSWGNIPCGSKEKPGVYTNVCRYTNWIQKTI 220 (223)
T ss_dssp TEEEEEEEECCSSCCCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CEEEEEEeeCCCCCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 8999999986321 223567788888888888765
No 47
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.64 E-value=7.1e-15 Score=133.25 Aligned_cols=166 Identities=16% Similarity=0.195 Sum_probs=104.7
Q ss_pred cceEEEEEecCCEEEecccccCCC--ceEEEEEcC--------CCcEEEEEEEEec------CCCCeEEEEecCC-cccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG--------SPTKYRAQVEAVG------HECDLAILIVESD-EFWE 201 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~~--------~g~~~~a~v~~~d------~~~DlAlLkv~~~-~~~~ 201 (385)
...|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+.+..+ ..+||||||++.+ .+.+
T Consensus 26 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~~ 105 (221)
T 1fuj_A 26 SHFCGGTLIHPSFVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSA 105 (221)
T ss_dssp CCCEEEEEEETTEEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCCS
T ss_pred CEEEEEEEecCCEEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccCC
Confidence 357999999999999999999864 356666531 1233444333332 3579999999876 4556
Q ss_pred cceeeecCCcc---cCCCeEEEEecCCCCCC----ceEEEeeEeecccccccCCCceeeEEE--ecccCCCCCCCcceee
Q 016641 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN----ISVTKGVVSRVEPTQYVHGATQLMAIQ--IDAAINPGNSGGPAIM 272 (385)
Q Consensus 202 ~~~~l~l~~~~---~~G~~V~~iG~p~~~~~----~~~~~G~Vs~~~~~~~~~~~~~~~~i~--~d~~i~~G~SGGPL~~ 272 (385)
.+.|+.|.... ..|+.+++.||...... .......+.-+ .. ... ........ .....|.|||||||+.
T Consensus 106 ~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~~-~C~-~~~~Ca~~~~~~~~~C~GDSGgPL~~ 182 (221)
T 1fuj_A 106 SVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-TF-FCR-PHNICTFVPRRKAGICFGDSGGPLIC 182 (221)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-CT-TCC-TTEEEEECSSSSCBCCTTCTTCEEEE
T ss_pred cceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-ee-ecC-CceeeeccCCCCCCCCCCCCCCeeEE
Confidence 78899998654 35899999999753221 11111111111 10 000 01111111 1346799999999998
Q ss_pred CCEEEEEEeeecC---CCCceEEEEecchHHHHHHHHH
Q 016641 273 GNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 273 ~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l~ 307 (385)
+|.++||+++... .....+....+...++++++..
T Consensus 183 ~~~l~Gi~s~~~~gC~~~~~p~vyt~v~~~~~WI~~~i 220 (221)
T 1fuj_A 183 DGIIQGIDSFVIWGCATRLFPDFFTRVALYVDWIRSTL 220 (221)
T ss_dssp TTEEEEEEEECSSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred CCEEeEEEEEeccCCCCCCCCcEEEeHHHHHHHHHHHh
Confidence 8999999998431 1223567777888888887654
No 48
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.63 E-value=3.8e-15 Score=136.62 Aligned_cols=169 Identities=16% Similarity=0.172 Sum_probs=105.4
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEecC------------------CCCeEEEEec
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH------------------ECDLAILIVE 195 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d~------------------~~DlAlLkv~ 195 (385)
..|+|.+|++.||||+|||+.+...+.+... ..++.+..+-+..++ .+||||||++
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~ 103 (237)
T 1gvz_A 24 FQCGGVLVHPQWVLTAAHCMSDDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLLRLA 103 (237)
T ss_dssp EEEEEEEEETTEEEECGGGCCSSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEEEES
T ss_pred eEEEeEEeeCCEEEEcHHhCCCCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEEEEeC
Confidence 5799999999999999999974333333211 013344454444443 6899999998
Q ss_pred CC-cccccceeeecCCcc-cCCCeEEEEecCCCCC---C--ceE---EEeeEeecccccccCCCceeeEEEe-----ccc
Q 016641 196 SD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGD---N--ISV---TKGVVSRVEPTQYVHGATQLMAIQI-----DAA 260 (385)
Q Consensus 196 ~~-~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~---~--~~~---~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~ 260 (385)
.+ .+.+.+.|+.|.... ..|+.+++.||..... . ... ...+++...+............+.. ...
T Consensus 104 ~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~ 183 (237)
T 1gvz_A 104 QPARITDAVKILDLPTQEPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRDDSGS 183 (237)
T ss_dssp SCCCCBTTBCCCCCCSSCCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSSTTCE
T ss_pred CCcccCCcEeeeECCCCCCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeCCCCCc
Confidence 76 456678899998654 5689999999975421 1 111 2222222222111100001112322 235
Q ss_pred CCCCCCCcceeeCCEEEEEEeeecCCC---CceEEEEecchHHHHHHHHHH
Q 016641 261 INPGNSGGPAIMGNKVAGVAFQNLSGA---ENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 261 i~~G~SGGPL~~~G~vVGI~s~~~~~~---~~~~~aip~~~i~~~l~~l~~ 308 (385)
.|.|||||||+.+|.++||++++..+. ...+....+....+|+++..+
T Consensus 184 ~C~GDSGgPL~~~~~l~GI~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 234 (237)
T 1gvz_A 184 ICLGDSGGALICDGVFQGITSWGYSECADFNDNFVFTKVMPHKKWIKETIE 234 (237)
T ss_dssp ECGGGTTCEEEETTEEEEEECCCSSSCEETTTSCCEEESGGGHHHHHHHHH
T ss_pred cCCCCccCcEeeCCEEEEEEEeCCCCCCCCCCCcEEEEHHHHHHHHHHHHh
Confidence 699999999998899999999865211 123456777788888877653
No 49
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.63 E-value=6e-15 Score=134.29 Aligned_cols=166 Identities=15% Similarity=0.147 Sum_probs=107.6
Q ss_pred eEEEEEecCCEEEecccccCCCceEEEEEcC------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccceee
Q 016641 141 TGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHFL 206 (385)
Q Consensus 141 ~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~~l 206 (385)
.|+|.+|++.||||+|||+. ..+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.+.|+
T Consensus 25 ~CgGtLI~~~~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~pi 102 (224)
T 2qxi_A 25 HCGGVLVNERWVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKKV 102 (224)
T ss_dssp EEEEEEEETTEEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCCC
T ss_pred EEEEEEecCCEEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceeeE
Confidence 79999999999999999995 445565531 12344444444443 479999999876 456678999
Q ss_pred ecCCcc-cCCCeEEEEecCCCCC--------CceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCcceee
Q 016641 207 ELGDIP-FLQQAVAVVGYPQGGD--------NISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGPAIM 272 (385)
Q Consensus 207 ~l~~~~-~~G~~V~~iG~p~~~~--------~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGPL~~ 272 (385)
.|.... ..|+.+++.||..... ...+...+++...+............+.. ....|.|||||||+.
T Consensus 103 cL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL~~ 182 (224)
T 2qxi_A 103 RLPSRCEPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPLVC 182 (224)
T ss_dssp CCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEEEE
T ss_pred ECCCCCCCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccEEE
Confidence 998654 5699999999975421 01223333433222111100001112332 246799999999998
Q ss_pred CCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 273 GNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 273 ~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
+|+++||+++...+ ....+....+...++++++..+
T Consensus 183 ~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 221 (224)
T 2qxi_A 183 RGTLQGLVSWGTFPCGQPNDPGVYTQVCKFTKWINDTMK 221 (224)
T ss_dssp TTEEEEEEEECCSSSCCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 89999999986321 1234667788888888887654
No 50
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.63 E-value=1e-14 Score=133.93 Aligned_cols=169 Identities=17% Similarity=0.168 Sum_probs=106.5
Q ss_pred cceEEEEEecCCEEEecccccCC---CceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVAD---STFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~---~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~ 199 (385)
...|+|.+|++.||||+|||+.+ ...+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+
T Consensus 25 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~ 104 (240)
T 1mza_A 25 HHVCGGVLIDPQWVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKL 104 (240)
T ss_dssp EEEEEEEEEETTEEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCCC
T ss_pred ceEEEEEEecCCEEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCccc
Confidence 35799999999999999999864 4556666531 12344444444443 479999999876 45
Q ss_pred cccceeeecCC-cc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccc--cccCC--CceeeEEEe-----ccc
Q 016641 200 WEGMHFLELGD-IP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPT--QYVHG--ATQLMAIQI-----DAA 260 (385)
Q Consensus 200 ~~~~~~l~l~~-~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~--~~~~~--~~~~~~i~~-----d~~ 260 (385)
.+.+.|+.|.. .. ..|+.+++.||...... ..+...+++...+. ..... ......+.. ...
T Consensus 105 ~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 184 (240)
T 1mza_A 105 NKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKD 184 (240)
T ss_dssp BTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCC
T ss_pred CCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCCc
Confidence 66788999976 22 45899999999753211 12222233322222 11111 011122332 246
Q ss_pred CCCCCCCcceeeCCEEEEEEeeecC-C-CCceEEEEecch-HHHHHHHHH
Q 016641 261 INPGNSGGPAIMGNKVAGVAFQNLS-G-AENIGYIIPVPV-IKHFITGVV 307 (385)
Q Consensus 261 i~~G~SGGPL~~~G~vVGI~s~~~~-~-~~~~~~aip~~~-i~~~l~~l~ 307 (385)
.|.|||||||+.+|.++||++++.. + ....+....+.. ..+|+++..
T Consensus 185 ~C~GDSGGPL~~~~~l~Gi~S~g~~C~~~~~p~vyt~v~~~y~~WI~~~~ 234 (240)
T 1mza_A 185 SCKGDAGGPLICKGVFHAIVSGGHECGVATKPGIYTLLTKKYQTWIKSNL 234 (240)
T ss_dssp CCTTCTTCEEEETTEEEEEECSSCCSSCTTCCEEEEECCHHHHHHHHHHT
T ss_pred cCCCCCCCeeEECCEEEEEEEECCCCCCCCCCcEEEeChHHHHHHHHHhc
Confidence 7999999999988899999998643 1 123455666666 777777654
No 51
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.63 E-value=9.5e-15 Score=135.14 Aligned_cols=170 Identities=19% Similarity=0.202 Sum_probs=110.7
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.+...+.|++.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (250)
T 1aut_C 24 KLACGAVLIHPSWVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQT 103 (250)
T ss_dssp CEEEEEEEEETTEEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred ceEEEEEEeeCCEEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCc
Confidence 357999999999999999999877667776531 12344454444444 479999999876 45667
Q ss_pred ceeeecCCcc-------cCCCeEEEEecCCCCCC------------ceEEEeeEeecccccccCCCceeeEEEe-----c
Q 016641 203 MHFLELGDIP-------FLQQAVAVVGYPQGGDN------------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----D 258 (385)
Q Consensus 203 ~~~l~l~~~~-------~~G~~V~~iG~p~~~~~------------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d 258 (385)
+.|+.|.... ..|+.+++.||...... ..+...+++...+............+.. .
T Consensus 104 v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Cag~~~~~ 183 (250)
T 1aut_C 104 IVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGDR 183 (250)
T ss_dssp BCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCSSCCCTTEEEECCTTCC
T ss_pred eeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhccCCCCCEEEeCCCCCC
Confidence 8899998642 35899999999753211 1122333333222211111111123333 2
Q ss_pred ccCCCCCCCccee--eCCE--EEEEEeeecC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 259 AAINPGNSGGPAI--MGNK--VAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 259 ~~i~~G~SGGPL~--~~G~--vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
...|.|||||||+ .+|+ ++||++++.. + ....+....+....+++++..+
T Consensus 184 ~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 239 (250)
T 1aut_C 184 QDACEGDSGGPMVASFHGTWFLVGLVSWGEGCGLLHNYGVYTKVSRYLDWIHGHIR 239 (250)
T ss_dssp CBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEECGGGTHHHHHHHHC
T ss_pred CCCCCCCCchheEEEECCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHhh
Confidence 4679999999999 4675 9999998653 1 1235677888888888888764
No 52
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.63 E-value=1.1e-14 Score=133.21 Aligned_cols=169 Identities=13% Similarity=0.155 Sum_probs=109.0
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC-----C--CcEEEEEEEEecC-------CCCeEEEEecCC-cccccce
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----S--PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMH 204 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~-----~--g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~ 204 (385)
..|+|.+|++.||||+|||+.+...+.+.... + .+.+..+-+..++ .+||||||++.+ .+.+.+.
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v~ 102 (231)
T 2aiq_A 23 SLCGGTLINQEWVLTARHCDRGNMRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSAHIA 102 (231)
T ss_dssp EEEEEEECSSSEEEECGGGCCSSCEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBTTBC
T ss_pred CeEEEEEEeCCEEEEcHHcCCCCCEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCCcEE
Confidence 47999999999999999999875544443221 1 1223333333333 469999999876 4556788
Q ss_pred eeecCCcc-cCCCeEEEEecCCCCC--------CceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCcce
Q 016641 205 FLELGDIP-FLQQAVAVVGYPQGGD--------NISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGGPA 270 (385)
Q Consensus 205 ~l~l~~~~-~~G~~V~~iG~p~~~~--------~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGGPL 270 (385)
|+.|.... ..|+.+++.||..... ...+...+++...+...... .....+.. ....|.|||||||
T Consensus 103 picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~~C~GDSGgPL 181 (231)
T 2aiq_A 103 PLSLPSNPPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKG-LAATTLCAGILEGGKDTCKGDSGGPL 181 (231)
T ss_dssp CCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTT-CCSSEEEEECTTCSCBCCTTCTTCEE
T ss_pred eeECCCCCCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcC-CCcCcEEeccCCCCCcccCCcCCCcE
Confidence 99998654 5699999999975321 01222333333222211111 11122322 3467999999999
Q ss_pred eeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHHc
Q 016641 271 IMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVEH 309 (385)
Q Consensus 271 ~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~~ 309 (385)
+.+|+++||+++...+ ....+....+....+|+++..+.
T Consensus 182 ~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~~~~ 223 (231)
T 2aiq_A 182 ICNGQFQGILSVGGNPCAQPRKPGIYTKVFDYTDWIQSIISG 223 (231)
T ss_dssp EETTEEEEEEEEECSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred EECCEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHcC
Confidence 9889999999987321 12356778888889999887653
No 53
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.63 E-value=5.7e-15 Score=134.29 Aligned_cols=166 Identities=20% Similarity=0.226 Sum_probs=108.7
Q ss_pred ceEEEEEecCCEEEecccccCCC--ceEEEEEc-----CCCcEEEEEEEEecC-----CCCeEEEEecCC-cccccceee
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS--TFVLVRKH-----GSPTKYRAQVEAVGH-----ECDLAILIVESD-EFWEGMHFL 206 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~-----~~g~~~~a~v~~~d~-----~~DlAlLkv~~~-~~~~~~~~l 206 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+. .+++.+..+-+..++ .+||||||++.+ .+.+.+.|+
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~pi 103 (224)
T 1pq7_A 24 PWCGGSLLNANTVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGYA 103 (224)
T ss_dssp EEEEEEEEETTEEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBCCC
T ss_pred eEEEEEEecCCEEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCcccce
Confidence 57999999999999999999853 45667653 134456666566665 469999999876 455678899
Q ss_pred ecCC--cc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccC-CCceeeEEEe-----cccCCCCCCCcc
Q 016641 207 ELGD--IP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVH-GATQLMAIQI-----DAAINPGNSGGP 269 (385)
Q Consensus 207 ~l~~--~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~-~~~~~~~i~~-----d~~i~~G~SGGP 269 (385)
.|.. .. ..|+.+++.||...... ..+...+++...+..... .......+.. ....|.||||||
T Consensus 104 cL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 183 (224)
T 1pq7_A 104 RLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGGP 183 (224)
T ss_dssp CBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTCE
T ss_pred ecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCcc
Confidence 9983 22 45899999999753211 122333333322211111 1111122333 346799999999
Q ss_pred ee-eCCEEEEEEeeecC-C-CCceEEEEecchHHHHHHH
Q 016641 270 AI-MGNKVAGVAFQNLS-G-AENIGYIIPVPVIKHFITG 305 (385)
Q Consensus 270 L~-~~G~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~ 305 (385)
|+ .+|.++||++++.. + ....+....+...++++++
T Consensus 184 L~~~~g~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~ 222 (224)
T 1pq7_A 184 IVDSSNTLIGAVSWGNGCARPNYSGVYASVGALRSFIDT 222 (224)
T ss_dssp EECTTCCEEEEEEECSSSSCTTCCEEEEETTTSHHHHHH
T ss_pred eECcCCeEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHh
Confidence 99 69999999998643 1 1234667777777777765
No 54
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.63 E-value=2.7e-17 Score=138.13 Aligned_cols=94 Identities=23% Similarity=0.312 Sum_probs=84.4
Q ss_pred CceEEEEecchHHHHHHHHHHcCeeeeeeccCcccccccc--HHHHhhcCCCC-ccCceEEEeeCCCCHHhhh-cCCCCE
Q 016641 288 ENIGYIIPVPVIKHFITGVVEHGKYVGFCSLGLSCQTTEN--VQLRNNFGMRS-EVTGVLVNKINPLSDAHEI-LKKDDI 363 (385)
Q Consensus 288 ~~~~~aip~~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~--~~~~~~~g~~~-~~~Gv~V~~V~~~spA~~a-L~~GDi 363 (385)
+|++||||++.+++++++|.++|++. ++|||+.++++.. .++++.+|++. ...|++|.+|.++|||+ + ||+||+
T Consensus 2 ~GigFAIP~~~~~~v~~~L~~~G~v~-r~~LGv~~~~~~~~~~~~~~~lgl~~~~~~g~~V~~V~~~spA~-aGL~~GD~ 79 (134)
T 2l97_A 2 EGLGFAIPANDAINIIEQLEKNGKVT-RPALGIQMVNLSNVSTSDIRRLNIPSNVTSGVIVRSVQSNMPAN-GHLEKYDV 79 (134)
T ss_dssp CCCCCCCCCCCCCCCCCCCCCCCCSS-CCCCCCEEEESSSSCHHHHHHHSSCSSSCSCEEEEECSTTSGGG-TTSCSSCE
T ss_pred CcEEEEeEHHHHHHHHHHHHHcCCEe-eeEeeEEEEECCchhHHHHHHcCCCcCCCCCEEEEEECCCCchH-HCCCCCCE
Confidence 57899999999999999999999998 8999999998843 36778899974 25899999999999999 9 999999
Q ss_pred EEEECCEEcCChhhHHhhhc
Q 016641 364 ILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 364 I~~vng~~i~~~~~l~~~l~ 383 (385)
|++|||++|.+..++.+.|.
T Consensus 80 I~~inG~~v~~~~~l~~~l~ 99 (134)
T 2l97_A 80 ITKVDDKEIASSTDLQSALY 99 (134)
T ss_dssp EEEETTEECCCHHHHHHHHH
T ss_pred EEEECCEEcCCHHHHHHHHH
Confidence 99999999999999987663
No 55
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.63 E-value=6e-15 Score=134.47 Aligned_cols=167 Identities=17% Similarity=0.134 Sum_probs=109.4
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCC--------CcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS--------PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~--------g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
..|+|.+|++.||||+|||+.+...+.|.+... ...+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~~v 103 (226)
T 1azz_A 24 YFCGGSLISPEWILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTAAI 103 (226)
T ss_dssp EEEEEEEEETTEEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCSSS
T ss_pred EEEEEEEecCCEEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCCCc
Confidence 579999999999999999998877777776321 2233333333333 479999999876 455678
Q ss_pred eeeecCCcc-cCCCeEEEEecCCCCCC-----ceEE---EeeEeecccccccCCCceeeEEEe----cccCCCCCCCcce
Q 016641 204 HFLELGDIP-FLQQAVAVVGYPQGGDN-----ISVT---KGVVSRVEPTQYVHGATQLMAIQI----DAAINPGNSGGPA 270 (385)
Q Consensus 204 ~~l~l~~~~-~~G~~V~~iG~p~~~~~-----~~~~---~G~Vs~~~~~~~~~~~~~~~~i~~----d~~i~~G~SGGPL 270 (385)
.|+.|.... ..|+.+++.||...... .... ..+++...+..... ......+.. ....|.|||||||
T Consensus 104 ~picL~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~-~~~~~~~Ca~~~~~~~~C~GDSGgPL 182 (226)
T 1azz_A 104 ATVGLPSTDVGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYG-IVTDGNICIDSTGGKGTCNGDSGGPL 182 (226)
T ss_dssp CCCBCCSSCCCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHS-CCCTTEEEECCTTTCBCCTTCTTCEE
T ss_pred ccccCCCCCCCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhC-cCCCceEeecCCCCCccCCCCCCcce
Confidence 899998654 56899999999753220 1122 22333222211110 001112332 2457999999999
Q ss_pred eeCCEEEEEEeeecC---CCCceEEEEecchHHHHHHHHH
Q 016641 271 IMGNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 271 ~~~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l~ 307 (385)
+.+|.++||++++.. .....+....+...++++++..
T Consensus 183 ~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 222 (226)
T 1azz_A 183 NYNGLTYGITSFGAAAGCEAGYPDAFTRVTYFLDWIQTQT 222 (226)
T ss_dssp EETTEEEEEEEEEETTCTTSCCCEEEEESGGGHHHHHHHH
T ss_pred EECCEEEEEEEEECCCCCCCCCCCEEEEHHHHHHHHHHHh
Confidence 988999999998763 1123466777888888888765
No 56
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.63 E-value=1.3e-14 Score=131.91 Aligned_cols=167 Identities=15% Similarity=0.174 Sum_probs=107.2
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecCC-------CCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGHE-------CDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~~-------~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.+ .+.|.+.. ..+.+..+-+..++. +||||||++.+ .+...
T Consensus 27 ~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (226)
T 4ag1_A 27 SKFCGGFLIRRNFVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRHPKYNTSTLHHDIMLLKLKEKASLTLA 104 (226)
T ss_dssp CEEEEEEEEETTEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred ccEEEEEEEeCCEEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeCCCCCCCCCcCcEEEEEECCCCccCCc
Confidence 45799999999999999999964 45555431 113345544455543 69999999875 45567
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCC
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSG 267 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SG 267 (385)
+.|+.|.... ..|+.+.+.||...... ..+...+++...+....... ....+.. ....|.||||
T Consensus 105 v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~-~~~~~Ca~~~~~~~~~C~GDsG 183 (226)
T 4ag1_A 105 VGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFRDFD-HNLQLCVGNPRKTKSAFKGDSG 183 (226)
T ss_dssp SCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTSTTCC-TTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHcccccCcC-ccceEeeccCCCCCcCccCCCC
Confidence 7888887543 45899999999753211 12333334333332111100 1112332 2467899999
Q ss_pred cceeeCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHH
Q 016641 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 268 GPL~~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|||+.++.++||++++.......+....+...++|+++..+
T Consensus 184 gPl~~~~~l~Gi~S~g~~c~~~p~vyt~v~~~~~WI~~~i~ 224 (226)
T 4ag1_A 184 GPLLCAGVAQGIVSYGRSDAKPPAVFTRISHYRPWINQILQ 224 (226)
T ss_dssp CEEEETTEEEEEEEECBTTCCSCEEEEEHHHHHHHHHHHHH
T ss_pred CceEEcCEEEEEEEECCCCCCCCCEEEEhHHHHHHHHHHHh
Confidence 99998899999999876533335677777778888877654
No 57
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.63 E-value=4.1e-14 Score=129.40 Aligned_cols=171 Identities=13% Similarity=0.102 Sum_probs=110.5
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC------CCc-EEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPT-KYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~------~g~-~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
...|+|.+|++.||||+|||+.....+.+.... +.. .+..+.+..++ .+||||||++.+ .+.+.+
T Consensus 25 ~~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v 104 (238)
T 4e7n_A 25 TLFCGGTLINQEWVLTAAHCDRKNFRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNSKHI 104 (238)
T ss_dssp CEEEEEEECSSSEEEECGGGCCSSCEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCBTTB
T ss_pred CEEEEEEEecCCEEEEhHHcCCCCCeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCCCce
Confidence 357999999999999999999866555553321 111 12223332232 469999999876 456678
Q ss_pred eeeecCCcc-cCCCeEEEEecCCCCC--------CceEEEeeEeecccccccC---CCceeeEEEe-----cccCCCCCC
Q 016641 204 HFLELGDIP-FLQQAVAVVGYPQGGD--------NISVTKGVVSRVEPTQYVH---GATQLMAIQI-----DAAINPGNS 266 (385)
Q Consensus 204 ~~l~l~~~~-~~G~~V~~iG~p~~~~--------~~~~~~G~Vs~~~~~~~~~---~~~~~~~i~~-----d~~i~~G~S 266 (385)
.|+.|.... ..|+.+++.||..... .......+++...+..... .......+.. ....|.|||
T Consensus 105 ~pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 184 (238)
T 4e7n_A 105 APFSLPSSPPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTCKGDS 184 (238)
T ss_dssp CCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCCTTCT
T ss_pred eeeeCCCCCCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccCCCCC
Confidence 899998655 5599999999975321 1123333444333221111 0011122332 346799999
Q ss_pred CcceeeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHHc
Q 016641 267 GGPAIMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVEH 309 (385)
Q Consensus 267 GGPL~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~~ 309 (385)
||||+.+++++||++++... ....+....+...++|+++..+.
T Consensus 185 GgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 230 (238)
T 4e7n_A 185 GGPLICNGQFQGIASWGDDPCAQPHKPAAYTKVFDHLDWIENIIAG 230 (238)
T ss_dssp TCEEEETTEEEEEEEECCSSTTCTTCCEEEEESGGGHHHHHHHHTT
T ss_pred CcceEECCEEEEEEEEeCCCCCCCCCCeEEEEhHHHHHHHHHHHhc
Confidence 99999889999999987541 12357778888899999887753
No 58
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.63 E-value=1.5e-14 Score=132.06 Aligned_cols=170 Identities=16% Similarity=0.136 Sum_probs=109.3
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC------CCcE-EEEEEEEecC-------CCCeEEEEecCC-cccccce
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPTK-YRAQVEAVGH-------ECDLAILIVESD-EFWEGMH 204 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~------~g~~-~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~ 204 (385)
..|+|.+|++.||||+|||+.....+.+.... +... ...+.+..++ .+||||||++.+ .+.+.+.
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~~v~ 103 (234)
T 3s69_A 24 FFCSGTLINEEWVLTAAHCDNTNFQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNSEHIV 103 (234)
T ss_dssp EEEEEEEEETTEEEECGGGCCSSCEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCBTTBC
T ss_pred eEEeEEEeeCCEEEEchhhCCCCceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCCCcce
Confidence 57999999999999999999865555543221 1111 2223333232 469999999876 4566788
Q ss_pred eeecCCcc-cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccC-CCceeeEEEe-----cccCCCCCCCcc
Q 016641 205 FLELGDIP-FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVH-GATQLMAIQI-----DAAINPGNSGGP 269 (385)
Q Consensus 205 ~l~l~~~~-~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~-~~~~~~~i~~-----d~~i~~G~SGGP 269 (385)
|+.|.... ..|+.+++.||...... ......+++...+..... .......+.. ....|.||||||
T Consensus 104 pi~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 183 (234)
T 3s69_A 104 PLSLPSSPPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGGDSGGP 183 (234)
T ss_dssp CCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTTCTTCE
T ss_pred eeecCCCCCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCCCCccc
Confidence 99998655 55999999999753211 122233333322221111 0011112322 346799999999
Q ss_pred eeeCCEEEEEEeeecCCC---CceEEEEecchHHHHHHHHHHc
Q 016641 270 AIMGNKVAGVAFQNLSGA---ENIGYIIPVPVIKHFITGVVEH 309 (385)
Q Consensus 270 L~~~G~vVGI~s~~~~~~---~~~~~aip~~~i~~~l~~l~~~ 309 (385)
|+.+++++||++++.... ...+....+...++|+++..+.
T Consensus 184 L~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~~~~WI~~~i~~ 226 (234)
T 3s69_A 184 LICNGQFQGIVSFGAHPCGQGLKPGVYTKVFDYNHWIQSIIAG 226 (234)
T ss_dssp EEETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHHT
T ss_pred eEEcCEEEEEEEEcccccCCCCCCcEEeeHHHHHHHHHHHhcC
Confidence 998899999999875411 2357778888999999987754
No 59
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.63 E-value=1.6e-14 Score=131.28 Aligned_cols=166 Identities=16% Similarity=0.176 Sum_probs=106.0
Q ss_pred ceEEEEEecCCEEEecccccCCC--ceEEEEEcCC-----C----cEEEEEEEEec------CCCCeEEEEecCC-cccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS--TFVLVRKHGS-----P----TKYRAQVEAVG------HECDLAILIVESD-EFWE 201 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~~~-----g----~~~~a~v~~~d------~~~DlAlLkv~~~-~~~~ 201 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+... . +.+..+-+..+ ..+||||||++.+ .+.+
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~~ 103 (225)
T 1a7s_A 24 HFCGGALIHARFVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLTS 103 (225)
T ss_dssp EEEEEEEEETTEEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCCBT
T ss_pred cEEEEEEeeCCEEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccCCC
Confidence 57999999999999999999753 4466665311 1 33444333332 3579999999876 4556
Q ss_pred cceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCCceeeEEE--ecccCCCCCCCcc
Q 016641 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQ--IDAAINPGNSGGP 269 (385)
Q Consensus 202 ~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~~~~~~i~--~d~~i~~G~SGGP 269 (385)
.+.|+.|.... ..|+.+++.||...... ..+...+++...+. . .....-. .....|.||||||
T Consensus 104 ~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~---~--~~~Ca~~~~~~~~~C~GDSGgP 178 (225)
T 1a7s_A 104 SVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPEDQCR---P--NNVCTGVLTRRGGICNGDGGTP 178 (225)
T ss_dssp TBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGGGSC---T--TEEEEECSSSSCBCCTTCTTCE
T ss_pred ceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHHHhc---c--CceEEeccCCCCCcccCCCcch
Confidence 78888887543 35899999999754321 11222222221111 0 1111111 1346799999999
Q ss_pred eeeCCEEEEEEeeecCCC-CceEEEEecchHHHHHHHHHHcC
Q 016641 270 AIMGNKVAGVAFQNLSGA-ENIGYIIPVPVIKHFITGVVEHG 310 (385)
Q Consensus 270 L~~~G~vVGI~s~~~~~~-~~~~~aip~~~i~~~l~~l~~~g 310 (385)
|+.+|.++||+++..... .+.+....+...++|+++..+..
T Consensus 179 l~~~g~l~Gi~S~g~~~C~~~p~vyt~V~~~~~WI~~~~~~~ 220 (225)
T 1a7s_A 179 LVCEGLAHGVASFSLGPCGRGPDFFTRVALFRDWIDGVLNNP 220 (225)
T ss_dssp EEETTEEEEEEEEECSSTTSSCEEEEEGGGGHHHHHHHHHSC
T ss_pred heeCCEEEEEEEEccCCcCCCCcEEEEhHHhHHHHHHHhcCC
Confidence 997789999999873321 12577788888999998877643
No 60
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.62 E-value=1.4e-14 Score=132.70 Aligned_cols=169 Identities=14% Similarity=0.166 Sum_probs=107.1
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEc------CCCcEEEEEEEEecC------------------CCCeEEEEec
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKH------GSPTKYRAQVEAVGH------------------ECDLAILIVE 195 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~------~~g~~~~a~v~~~d~------------------~~DlAlLkv~ 195 (385)
..|+|.+|++.||||+|||+.+...+.+... ...+.+..+-+..++ .+||||||++
T Consensus 24 ~~CgGsLIs~~~VLTAAHC~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl~L~ 103 (238)
T 1spj_A 24 FQCGGILVHRQWVLTAAHCISDNYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLLRLT 103 (238)
T ss_dssp EEEEEEEEETTEEEECGGGCCSSEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEEEES
T ss_pred eeEEEEEecCCEEEEcHHhCCCCceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEEEEEC
Confidence 5799999999999999999986443333211 012334444333332 3699999998
Q ss_pred CC-c-ccccceeeecCCcc-cCCCeEEEEecCCCCC--------CceEEEeeEeecccccccCCCceeeEEEe-----cc
Q 016641 196 SD-E-FWEGMHFLELGDIP-FLQQAVAVVGYPQGGD--------NISVTKGVVSRVEPTQYVHGATQLMAIQI-----DA 259 (385)
Q Consensus 196 ~~-~-~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~--------~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~ 259 (385)
.+ . +.+.++|+.|.... ..|+.+++.||..... ...+...+++...+............+.. ..
T Consensus 104 ~~~~~~~~~v~pi~L~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~ 183 (238)
T 1spj_A 104 EPADTITDAVKVVELPTEEPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHLEGGK 183 (238)
T ss_dssp SCCCCSSTTCCCCCCCSSCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTTCSS
T ss_pred ccccccCCceeeccCCCCCCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCCCeEEeeCCCCCC
Confidence 76 3 56678899998654 5699999999975321 11233333433222211111011112322 24
Q ss_pred cCCCCCCCcceeeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 260 AINPGNSGGPAIMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 260 ~i~~G~SGGPL~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
..|.|||||||+.+|.++||++++..+ ....+....+...++|+++..+
T Consensus 184 ~~C~GDSGgPL~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 235 (238)
T 1spj_A 184 DTCVGDSGGPLMCDGVLQGVTSWGYVPCGTPNKPSVAVRVLSYVKWIEDTIA 235 (238)
T ss_dssp BCCTTCTTCEEEETTEEEEEEEECCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCCCCCCcEEEcCEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 679999999999889999999987321 1235677788888888887654
No 61
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.61 E-value=2e-14 Score=130.64 Aligned_cols=165 Identities=15% Similarity=0.146 Sum_probs=108.2
Q ss_pred ceEEEEEecCCEEEecccccCC---CceEEEEEcC-----CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVAD---STFVLVRKHG-----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~---~~~i~V~~~~-----~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
..|+|.+|++.||||+|||+.+ ...+.|.+.. +++.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~v 103 (222)
T 1eq9_A 24 HRCGASILDNNNVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDLV 103 (222)
T ss_dssp EEEEEEECSSSEEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEeeCCEEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCce
Confidence 5799999999999999999976 3456776531 23455555454544 479999999876 456678
Q ss_pred eeeecCCcc--cCCCeEEEEecCCCCCC-------ceEEEeeEeecccc-cccCCCceeeEEEe----cccCCCCCCCcc
Q 016641 204 HFLELGDIP--FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPT-QYVHGATQLMAIQI----DAAINPGNSGGP 269 (385)
Q Consensus 204 ~~l~l~~~~--~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~-~~~~~~~~~~~i~~----d~~i~~G~SGGP 269 (385)
.|+.|.... ..|+.+++.||...... ..+..-+++...+. .... .....+.. ....|.||||||
T Consensus 104 ~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~--~~~~~~Ca~~~~~~~~C~GDSGgP 181 (222)
T 1eq9_A 104 QPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR--VIDSHICTLTKRGEGACHGDSGGP 181 (222)
T ss_dssp CCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS--CCTTEEEECCCTTCBCCTTCTTCE
T ss_pred EccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC--CCccEEeecCCCCCeeeeCCccce
Confidence 999998654 35899999999753211 12222233322221 1100 01112322 235799999999
Q ss_pred eeeCCEEEEEEeeecC-CCCceEEEEecchHHHHHHHH
Q 016641 270 AIMGNKVAGVAFQNLS-GAENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 270 L~~~G~vVGI~s~~~~-~~~~~~~aip~~~i~~~l~~l 306 (385)
|+.+|.++||++++.. +....+....+....+|+++.
T Consensus 182 L~~~~~l~GI~S~g~~C~~~~p~vyt~V~~~~~WI~~~ 219 (222)
T 1eq9_A 182 LVANGAQIGIVSFGSPCALGEPDVYTRVSSFVSWINAN 219 (222)
T ss_dssp EEETTEEEEEEEECSTTTSSSCEEEEEGGGGHHHHHHT
T ss_pred EEECCEEEEEEEECCCcCCCCCCEEEEHHHHHHHHHHH
Confidence 9988899999998643 112356667777777777664
No 62
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.61 E-value=5.7e-14 Score=127.36 Aligned_cols=166 Identities=17% Similarity=0.213 Sum_probs=106.4
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecCC-------CCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGHE-------CDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~~-------~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.. .+.|.+.. ..+.+..+-+..++. +||||||++.+ .+.+.
T Consensus 27 ~~~CgGtLI~~~~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (224)
T 3rp2_A 27 RVICGGFLISRQFVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIHESYNSVPNLHDIMLLKLEKKVELTPA 104 (224)
T ss_dssp EEEEEEEESSSSEEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCSSSCCSCCEEEEESSCCCCBTT
T ss_pred EEEEEeEEeeCCEEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEECCCccCCCCCccEEEEEcCCCcccCCc
Confidence 45799999999999999999965 44454421 123455554555543 69999999876 45667
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCC-------CceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCC
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGD-------NISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSG 267 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~-------~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SG 267 (385)
+.|+.|.... ..|+.+++.||..... .......+++...+....... ....+.. ....|.||||
T Consensus 105 v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~-~~~~~Ca~~~~~~~~~C~GDsG 183 (224)
T 3rp2_A 105 VNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYRYYE-YKFQVCVGSPTTLRAAFMGDSG 183 (224)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTTCCC-TTTEEEECCTTSCCBCCTTTTT
T ss_pred ccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhccccccC-cCCEEEecCCCCCCeeccCCCC
Confidence 8888887543 4589999999964321 112333334333332111100 1112222 2367899999
Q ss_pred cceeeCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHH
Q 016641 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 268 GPL~~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
|||+.++.++||++++.......+....+...++|+++..
T Consensus 184 gPl~~~~~l~Gi~S~g~~c~~~p~vyt~v~~y~~WI~~~i 223 (224)
T 3rp2_A 184 GPLLCAGVAHGIVSYGHPDAKPPAIFTRVSTYVPWINAVI 223 (224)
T ss_dssp CEEEETTEEEEEEEECCTTCCSCEEEEEHHHHHHHHHHHH
T ss_pred CeEEEcceeeEEEEECCCCCCCCcEEEEHHHhHHHHHHHh
Confidence 9999889999999987543223566677777777777653
No 63
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.61 E-value=9.3e-15 Score=132.33 Aligned_cols=162 Identities=17% Similarity=0.164 Sum_probs=104.0
Q ss_pred ceEEEEEecCCEEEecccccCCC--ceEEEEEcCC--------CcEEEEEEEEec------CCCCeEEEEecCC-ccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS--TFVLVRKHGS--------PTKYRAQVEAVG------HECDLAILIVESD-EFWEG 202 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~~~--------g~~~~a~v~~~d------~~~DlAlLkv~~~-~~~~~ 202 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+... .+.+..+-+..+ ..+||||||++.+ .+.+.
T Consensus 24 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~~~ 103 (218)
T 2z7f_E 24 HFCGATLIAPNFVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATINAN 103 (218)
T ss_dssp EEEEEEEEETTEEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCSSS
T ss_pred cEEEEEEccCCEEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCCCc
Confidence 57999999999999999999864 3466665321 133444433332 3479999999876 45567
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCCceeeEEEe--cccCCCCCCCcce
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQI--DAAINPGNSGGPA 270 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~--d~~i~~G~SGGPL 270 (385)
+.|+.|.... ..|+.+++.||...... ..+...++ ...+. . ........ ....|.|||||||
T Consensus 104 v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~~~C~----~-~~~Ca~~~~~~~~~C~GDSGgPl 177 (218)
T 2z7f_E 104 VQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-TSLCR----R-SNVCTLVRGRQAGVCFGDSGSPL 177 (218)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-CTTCC----T-TSEEEECTTSCCBCCTTCTTCEE
T ss_pred eeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-hhHcC----c-ceeeeccCCCCCeeCCCcCCCce
Confidence 8899998643 35899999999754321 11222222 11111 0 11111111 3467999999999
Q ss_pred eeCCEEEEEEeeecCC---CCceEEEEecchHHHHHHHHH
Q 016641 271 IMGNKVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 271 ~~~G~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~ 307 (385)
+.+|.++||+++.... ....+....+....+++++..
T Consensus 178 ~~~~~l~Gi~S~~~g~C~~~~~p~vyt~V~~~~~WI~~~~ 217 (218)
T 2z7f_E 178 VCNGLIHGIASFVRGGCASGLYPDAFAPVAQFVNWIDSII 217 (218)
T ss_dssp EETTEEEEEEEEESSSTTCSSSCEEEEEGGGGHHHHHHHH
T ss_pred EEccEEEEEEEeCCccCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 9888999999983221 112467777888888887654
No 64
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.61 E-value=2.3e-14 Score=130.52 Aligned_cols=168 Identities=19% Similarity=0.220 Sum_probs=107.3
Q ss_pred ceEEEEEecCCEEEecccccCCCc--eEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADST--FVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWE 201 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~--~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~ 201 (385)
..|+|.+|++.||||+|||+.+.. .+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~~ 103 (228)
T 2xw9_A 24 HLCGGVLVAEQWVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLGP 103 (228)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCBT
T ss_pred eEEEEEEEeCCEEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCcccCC
Confidence 579999999999999999997533 67776531 12344554444444 479999999876 4556
Q ss_pred cceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccC--CCceeeEEEe---cccCCCCCC
Q 016641 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVH--GATQLMAIQI---DAAINPGNS 266 (385)
Q Consensus 202 ~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~--~~~~~~~i~~---d~~i~~G~S 266 (385)
.+.|+.|.... ..|+.+++.||...... ......+++...+..... .......+.. ....|.|||
T Consensus 104 ~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDs 183 (228)
T 2xw9_A 104 AVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGDA 183 (228)
T ss_dssp TBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTTCT
T ss_pred CeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCCCCccCCCCC
Confidence 78888887632 45899999999753211 122223333322211111 0011112332 346799999
Q ss_pred CcceeeCCEEEEEEeeecCCC---CceEEEEecchHHHHHHHHH
Q 016641 267 GGPAIMGNKVAGVAFQNLSGA---ENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 267 GGPL~~~G~vVGI~s~~~~~~---~~~~~aip~~~i~~~l~~l~ 307 (385)
||||+.+|.++||+++...+. ...+....+...++|+++..
T Consensus 184 GgPL~~~~~l~Gi~s~g~~~C~~~~~p~vyt~V~~~~~WI~~~i 227 (228)
T 2xw9_A 184 GGPLVCGGVLEGVVTSGSRVCGNRKKPGIYTRVASYAAWIDSVL 227 (228)
T ss_dssp TCEEEETTEEEEEECCSCCCSSCTTSCEEEEEGGGGHHHHHHHH
T ss_pred cccEEECCEEEEEEeecCCcCCCCCCCcEEEEHHHHHHHHHHHh
Confidence 999998889999999865211 23567788888888887754
No 65
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.61 E-value=1.1e-14 Score=132.82 Aligned_cols=167 Identities=15% Similarity=0.158 Sum_probs=105.4
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.+ .+.|++.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 26 ~~~CgGsLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1euf_A 26 SHICGGFLVREDFVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDK 103 (227)
T ss_dssp EEEEEEEEEETTEEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred ceEEEEEEeeCCEEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCc
Confidence 35799999999999999999975 45555421 12344454444444 479999999876 45567
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCCceeeEEEec-----ccCCCCCCC
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQID-----AAINPGNSG 267 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d-----~~i~~G~SG 267 (385)
+.|+.|.... ..|+.+++.||...... ..+...+++...+............+... ...+.||||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsG 183 (227)
T 1euf_A 104 VSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSG 183 (227)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCCC
Confidence 8899998643 35899999999753211 11222222222221111110111223332 234589999
Q ss_pred cceeeCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHH
Q 016641 268 GPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 268 GPL~~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
|||+.+|.++||++++.......+...-+...++|+++..
T Consensus 184 gPL~~~~~l~Gi~S~gc~~~~~p~vyt~V~~y~~WI~~~~ 223 (227)
T 1euf_A 184 GPLVCNGVAQGIVSYGRNDGTTPDVYTRISSFLSWIHSTM 223 (227)
T ss_dssp CEEEETTEEEEEEEECCTTCCSCEEEEEGGGTHHHHHHHT
T ss_pred CceEECCEEEEEEEEeCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 9999889999999986332233566777777888887654
No 66
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.60 E-value=5.8e-14 Score=127.96 Aligned_cols=169 Identities=17% Similarity=0.125 Sum_probs=110.2
Q ss_pred ceEEEEEecCCEEEecccccCC--CceEEEEEcC-----CCcEEEEEEEEec------CCCCeEEEEecCC-cccc-cce
Q 016641 140 TTGSGFVIPGKKILTNAHVVAD--STFVLVRKHG-----SPTKYRAQVEAVG------HECDLAILIVESD-EFWE-GMH 204 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~--~~~i~V~~~~-----~g~~~~a~v~~~d------~~~DlAlLkv~~~-~~~~-~~~ 204 (385)
..|+|.+|++.||||+|||+.+ ...+.|.+.. .++.+..+-+..+ ..+|||||+++.+ .+.+ .++
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~v~ 103 (235)
T 3h7t_A 24 PFCGGSILTANFVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKTTK 103 (235)
T ss_dssp CCEEEEESSSSEEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSSCC
T ss_pred ceEeEEEeeCCEEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCcccc
Confidence 4699999999999999999964 4566776531 2233444333322 2479999999876 4555 688
Q ss_pred eeecCCcc---cCCCeEEEEecCCCCC--------CceEEEeeEeecccccccCCC-----ceeeEEEe-----cccCCC
Q 016641 205 FLELGDIP---FLQQAVAVVGYPQGGD--------NISVTKGVVSRVEPTQYVHGA-----TQLMAIQI-----DAAINP 263 (385)
Q Consensus 205 ~l~l~~~~---~~G~~V~~iG~p~~~~--------~~~~~~G~Vs~~~~~~~~~~~-----~~~~~i~~-----d~~i~~ 263 (385)
|+.|.... ..|+.+++.||..... ...+...+++...+....... .....+.. ....|.
T Consensus 104 pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 183 (235)
T 3h7t_A 104 KIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYIGY 183 (235)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBCCT
T ss_pred ceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCcccc
Confidence 89987643 4589999999975321 122333344332221111000 11112332 346789
Q ss_pred CCCCcceeeCCEEEEEEeeecC-CCCceEEEEecchHHHHHHHHHH
Q 016641 264 GNSGGPAIMGNKVAGVAFQNLS-GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 264 G~SGGPL~~~G~vVGI~s~~~~-~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|||||||+.+|+++||+++... +....+....+....+|+++..+
T Consensus 184 GDsGgPl~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~ 229 (235)
T 3h7t_A 184 GDAGDPAVQNGTLVGVASYISSMPSEFPSVFLRVGYYVLDIKDIIS 229 (235)
T ss_dssp TCTTCEEEETTEEEEEECCCTTCCTTSCEEEEEGGGGHHHHHHHHT
T ss_pred CCCCCceeeCCeEEEEEEecCCCCCCCCceEEEHHHHHHHHHHHHh
Confidence 9999999999999999998644 11345777888889999988774
No 67
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.60 E-value=1.2e-13 Score=125.38 Aligned_cols=168 Identities=15% Similarity=0.135 Sum_probs=108.1
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecCC-------CCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGHE-------CDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~~-------~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.. .+.|.+.. ..+.+..+-+..++. +||||||++.+ .+.+.
T Consensus 27 ~~~CgGtLI~~~~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 104 (227)
T 3fzz_A 27 KMFCGGFLVRDKFVLTAAHCKGR--SMTVTLGAHNIKAKEETQQIIPVAKAIPHPDYNPDDRSNDIMLLKLVRNAKRTRA 104 (227)
T ss_dssp EEEEEEEEEETTEEEECTTCCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred eeEEEEEEEeCCEEEECcccCCC--CcEEEEcccccCCCCCCceEEEEEEEEECcCCCCCCCcCCEEEEEECCcCCCCCc
Confidence 45799999999999999999954 44555421 123455554555543 69999999876 45667
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeeccccc-ccCCCceeeEEEe-----cccCCCCCC
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQ-YVHGATQLMAIQI-----DAAINPGNS 266 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~-~~~~~~~~~~i~~-----d~~i~~G~S 266 (385)
+.|+.|.... ..|+.+++.||...... ..+...+++...+.. +.........+.. ....|.|||
T Consensus 105 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~gDs 184 (227)
T 3fzz_A 105 VRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQFQSSYNRANEICVGDSKIKGASFEEDS 184 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHHTTTCCTTTEEEECCCSSCBCCTTTTT
T ss_pred ccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhhccccCCCceEEEeCCCCCCcccccCC
Confidence 8899997544 45899999999743211 122222222222211 1000001112322 245789999
Q ss_pred CcceeeCCEEEEEEeeecCCCCceEEEEecchHHHHHHHHHH
Q 016641 267 GGPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 267 GGPL~~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
||||+.++.++||++++.......+....+...++|+++..+
T Consensus 185 GgPl~~~~~l~Gi~S~g~~c~~~p~vyt~V~~~~~WI~~~i~ 226 (227)
T 3fzz_A 185 GGPLVCKRAAAGIVSYGQTDGSAPQVFTRVLSFVSWIKKTMK 226 (227)
T ss_dssp TCEEEETTEEEEEEEECCTTCSSSEEEEEGGGTHHHHHHHHT
T ss_pred ccceEEecCCcEEEEECCCCCCCCeEEEEhHHhHHHHHHHHh
Confidence 999998889999999875533336777788888888887654
No 68
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.59 E-value=5e-14 Score=128.93 Aligned_cols=168 Identities=18% Similarity=0.158 Sum_probs=106.5
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.+ ....|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 23 ~~~CgGtLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 101 (234)
T 1orf_A 23 KTICAGALIAKDWVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINKY 101 (234)
T ss_dssp SCEEEEEEEETTEEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSSS
T ss_pred ceEEEEEEeeCCEEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCCC
Confidence 35799999999999999999975 334454421 12344454444443 479999999876 45567
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccc--c-ccCCC-ceeeEEEe-----cccCCC
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPT--Q-YVHGA-TQLMAIQI-----DAAINP 263 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~--~-~~~~~-~~~~~i~~-----d~~i~~ 263 (385)
+.|+.|.... ..|+.+++.||...... ..+...+++...+. . +.... .....+.. ....|.
T Consensus 102 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 181 (234)
T 1orf_A 102 VTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSCN 181 (234)
T ss_dssp SCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCCT
T ss_pred eeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCCC
Confidence 8899998644 35899999999753211 12233333332222 1 10011 00012322 346799
Q ss_pred CCCCcceeeCCEEEEEEeeecC-C---CCceEEEEecc-hHHHHHHHHH
Q 016641 264 GNSGGPAIMGNKVAGVAFQNLS-G---AENIGYIIPVP-VIKHFITGVV 307 (385)
Q Consensus 264 G~SGGPL~~~G~vVGI~s~~~~-~---~~~~~~aip~~-~i~~~l~~l~ 307 (385)
|||||||+.+|.++||++++.. + ....+....+. ...+|+++..
T Consensus 182 GDSGgPL~~~~~l~GI~S~g~~~~C~~~~~p~vyt~v~~~~~~WI~~~~ 230 (234)
T 1orf_A 182 GDSGSPLLCEGVFRGVTSFGLENKCGDPRGPGVYILLSKKHLNWIIMTI 230 (234)
T ss_dssp TCTTCEEEETTEEEEEEEECCTTCTTCTTSCEEEEECCHHHHHHHHHHH
T ss_pred CCCCCeEEECCEEEEEEEEcCCCCCCCCCCCCEEEEchHHHHHHHHHHH
Confidence 9999999988899999998752 1 12346667777 7777877655
No 69
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.59 E-value=6.8e-14 Score=128.77 Aligned_cols=168 Identities=15% Similarity=0.126 Sum_probs=108.5
Q ss_pred ceEEEEEecCCEEEecccccCC----------------CceEEEEEcC--------CCcEEEEEEEEecCC-------CC
Q 016641 140 TTGSGFVIPGKKILTNAHVVAD----------------STFVLVRKHG--------SPTKYRAQVEAVGHE-------CD 188 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~----------------~~~i~V~~~~--------~g~~~~a~v~~~d~~-------~D 188 (385)
..|+|.+|++.||||+|||+.+ ...+.|.+.. ..+.+..+-+..++. +|
T Consensus 25 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~D 104 (251)
T 3gov_B 25 PFCGGSLLGSSWIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFEND 104 (251)
T ss_dssp EEEEEEEETTTEEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTBTC
T ss_pred eeEEEEEecCCEEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCCCC
Confidence 5799999999999999999954 2456666531 123445554555543 79
Q ss_pred eEEEEecCC-cccccceeeecCCcc-cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccC---CCceeeEEEe
Q 016641 189 LAILIVESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVH---GATQLMAIQI 257 (385)
Q Consensus 189 lAlLkv~~~-~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~---~~~~~~~i~~ 257 (385)
|||||++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+..... .......+..
T Consensus 105 IAll~L~~~~~~~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca 184 (251)
T 3gov_B 105 VALVELLESPVLNAFVMPICLPEGPQQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDMICA 184 (251)
T ss_dssp CEEEEESSCCCCSSSCCCCBCCSSCCCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTEEEE
T ss_pred EEEEEeCCcccCCCceEEeECCCCCCCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCcEEe
Confidence 999999875 456678899998655 56999999999753221 123333333322211111 0011123333
Q ss_pred -----cccCCCCCCCccee-eC---C--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHH
Q 016641 258 -----DAAINPGNSGGPAI-MG---N--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 258 -----d~~i~~G~SGGPL~-~~---G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~ 307 (385)
....|.|||||||+ .+ | .++||++++.. + ....+....+...++|+++..
T Consensus 185 ~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 247 (251)
T 3gov_B 185 GEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGDDCGKKDRYGVYSYIHHNKDWIQRVT 247 (251)
T ss_dssp SCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCSSCCEEEEETTTTHHHHHHHH
T ss_pred cCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECCCCCCCCCCEEEEEHHHhHHHHHHHh
Confidence 24679999999999 53 3 69999998743 1 122467788888888888765
No 70
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.59 E-value=7.3e-14 Score=128.42 Aligned_cols=169 Identities=18% Similarity=0.123 Sum_probs=108.6
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------C--CCeEEEEecCC-cccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------E--CDLAILIVESD-EFWE 201 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~--~DlAlLkv~~~-~~~~ 201 (385)
..|+|.+|++.||||+|||+.....+.|.+.. ..+.+..+-+..++ . +||||||++.+ .+.+
T Consensus 28 ~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~ 107 (241)
T 1bru_P 28 HTCGGTLVDQSWVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLTD 107 (241)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCCS
T ss_pred eEEEeEEeeCCEEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccCC
Confidence 57999999999999999999855667776531 12345554444443 2 79999999876 4566
Q ss_pred cceeeecCCcc---cCCCeEEEEecCCCCC-------CceEEEeeEeecccccc--cCCCceeeEEEe----cccCCCCC
Q 016641 202 GMHFLELGDIP---FLQQAVAVVGYPQGGD-------NISVTKGVVSRVEPTQY--VHGATQLMAIQI----DAAINPGN 265 (385)
Q Consensus 202 ~~~~l~l~~~~---~~G~~V~~iG~p~~~~-------~~~~~~G~Vs~~~~~~~--~~~~~~~~~i~~----d~~i~~G~ 265 (385)
.+.|+.|.... ..|+.+++.||..... ...+...+++...+... .........+.. ....|.||
T Consensus 108 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 187 (241)
T 1bru_P 108 KIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNGD 187 (241)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTTC
T ss_pred ccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCCC
Confidence 78899997643 3588999999975321 11223333333222211 000011122333 23579999
Q ss_pred CCccee-e--CC--EEEEEEeeecC-C---CCceEEEEecchHHHHHHHHHH
Q 016641 266 SGGPAI-M--GN--KVAGVAFQNLS-G---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 266 SGGPL~-~--~G--~vVGI~s~~~~-~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|||||+ . +| .++||++++.. + ....+....+....+++++..+
T Consensus 188 SGgPL~~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 239 (241)
T 1bru_P 188 SGGPLNCQGANGQWQVHGIVSFGSSLGCNYYHKPSVFTRVSNYIDWINSVIA 239 (241)
T ss_dssp TTCEEEEECTTSCEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CCCcEEEECCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 999999 5 46 89999998752 1 1234667777888888877653
No 71
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.59 E-value=5.4e-14 Score=129.18 Aligned_cols=169 Identities=17% Similarity=0.109 Sum_probs=109.2
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC---------CCCeEEEEecCC-cccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH---------ECDLAILIVESD-EFWE 201 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~---------~~DlAlLkv~~~-~~~~ 201 (385)
..|+|.+|++.||||+|||+.+...+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+
T Consensus 28 ~~CgGsLI~~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~~ 107 (240)
T 1gvk_B 28 HTCGGTLIRQNWVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLNS 107 (240)
T ss_dssp EEEEEEEEETTEEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCBT
T ss_pred ceEEEEEeeCCEEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccCC
Confidence 57999999999999999999877777777631 12344454444443 569999999876 4556
Q ss_pred cceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccc--cCCCceeeEEEe----cccCCCCC
Q 016641 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQY--VHGATQLMAIQI----DAAINPGN 265 (385)
Q Consensus 202 ~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~--~~~~~~~~~i~~----d~~i~~G~ 265 (385)
.+.|+.|.... ..|+.+++.||...... ..+...+++...+... .........+.. ....|.||
T Consensus 108 ~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 187 (240)
T 1gvk_B 108 YVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQGD 187 (240)
T ss_dssp TBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTTC
T ss_pred CccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCCC
Confidence 78898887643 35899999999753211 1222233332222111 000001122333 24579999
Q ss_pred CCccee--eCC--EEEEEEeeecC-C---CCceEEEEecchHHHHHHHHHH
Q 016641 266 SGGPAI--MGN--KVAGVAFQNLS-G---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 266 SGGPL~--~~G--~vVGI~s~~~~-~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|||||+ .+| .++||+++... + ....+....+....+++++..+
T Consensus 188 SGgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~i~ 238 (240)
T 1gvk_B 188 SGGPLHCLVNGQYAVHGVTSFVSRLGCNVTRKPTVFTRVSAYISWINNVIA 238 (240)
T ss_dssp TTCEEEEEETTEEEEEEEEEECBTTBSSCTTCCEEEEEGGGSHHHHHHHHH
T ss_pred CcCceEEEECCcEEEEEEEEEeCCCCCCCCCCCcEEEeHHHHHHHHHHHHh
Confidence 999999 378 89999998642 1 1235677777888888877653
No 72
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.58 E-value=6.4e-14 Score=128.86 Aligned_cols=169 Identities=18% Similarity=0.170 Sum_probs=108.3
Q ss_pred ceEEEEEecCCEEEecccccCCCc-eEEEEEcC-----CCcEEEEEEEEec--------CCCCeEEEEecCC-cccccce
Q 016641 140 TTGSGFVIPGKKILTNAHVVADST-FVLVRKHG-----SPTKYRAQVEAVG--------HECDLAILIVESD-EFWEGMH 204 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~-~i~V~~~~-----~g~~~~a~v~~~d--------~~~DlAlLkv~~~-~~~~~~~ 204 (385)
..|+|.+|++.||||+|||+.+.. .+.|.+.. .++.+..+-+..+ ..+||||||++.+ .+.+.+.
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v~ 103 (240)
T 2zgc_A 24 HLCGGVLVHPKWVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTIR 103 (240)
T ss_dssp EEEEEEEEETTEEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSSCC
T ss_pred eEEEEEEEcCCEEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCcee
Confidence 579999999999999999998653 46666531 2234444434333 3479999999876 4556788
Q ss_pred eeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeeccccc--ccCCCceeeEEEe-----cccCCCCCCC
Q 016641 205 FLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQ--YVHGATQLMAIQI-----DAAINPGNSG 267 (385)
Q Consensus 205 ~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~--~~~~~~~~~~i~~-----d~~i~~G~SG 267 (385)
|+.|.... ..|+.+++.||...... ..+...+++...+.. ..........+.. ....|.||||
T Consensus 104 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 183 (240)
T 2zgc_A 104 PLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDSG 183 (240)
T ss_dssp CCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCTT
T ss_pred eeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCCcc
Confidence 99998643 35899999999753211 122222333222221 1111011122332 2467999999
Q ss_pred cceeeCC--EEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 268 GPAIMGN--KVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 268 GPL~~~G--~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|||+.++ .++||+++...+ ....+....+...++|+++..+
T Consensus 184 gPL~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 229 (240)
T 2zgc_A 184 GPLVCGKGRVLAGVLSFSSRVCTDIFKPPVATAVAPYVSWIRKVTG 229 (240)
T ss_dssp CEEEETTTTEEEEEECCCCSSTTCTTSCCEEEESGGGHHHHHHHHC
T ss_pred CeeEECCCCEEEEEEEECCCCCCCCCCCcEEEEHHHhHHHHHHHHh
Confidence 9999555 999999986321 1235677888888899888764
No 73
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.58 E-value=8.1e-14 Score=128.49 Aligned_cols=168 Identities=14% Similarity=0.152 Sum_probs=105.6
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGM 203 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~ 203 (385)
..|+|.+|++.||||+|||+.+. ...|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.+
T Consensus 40 ~~CgGtLI~~~~VLTAAHC~~~~-~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 118 (245)
T 1t8o_A 40 HFCGGSLINENWVVTAAHCGVTT-SDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQTV 118 (245)
T ss_dssp EEEEEEEEETTEEEECGGGCCCT-TSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTTB
T ss_pred eEEEEEEeeCCEEEEcHHhCcCC-CcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCCce
Confidence 57999999999999999999763 23343321 12344444444443 479999999876 456678
Q ss_pred eeeecCCcc---cCCCeEEEEecCCCCCC--------ceEEEeeEeeccccccc---CCCceeeEEEecccCCCCCCCcc
Q 016641 204 HFLELGDIP---FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYV---HGATQLMAIQIDAAINPGNSGGP 269 (385)
Q Consensus 204 ~~l~l~~~~---~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~---~~~~~~~~i~~d~~i~~G~SGGP 269 (385)
.|+.|.... ..|+.+++.||...... ..+...+++...+.... ........-......|.||||||
T Consensus 119 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~C~GDSGgP 198 (245)
T 1t8o_A 119 SAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSGGP 198 (245)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECSSCBCCTTCTTCE
T ss_pred eeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcCcCCCceEEccCCCCccCcccCcCC
Confidence 999997543 35899999999753210 12222333322221111 11111111122346799999999
Q ss_pred ee-e-CC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 270 AI-M-GN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 270 L~-~-~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|+ . +| .++||++++.. .....+....+....+|+++..+
T Consensus 199 L~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 243 (245)
T 1t8o_A 199 LVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTLA 243 (245)
T ss_dssp EEEEETTEEEEEEEEEECCTTCCTTSEEEEEEGGGTHHHHHHHHH
T ss_pred EEEEECCEEEEEEEEEeCCCCCCCCCCEEEEEHHHHHHHHHHHHc
Confidence 99 3 45 79999998654 11235677788888888877653
No 74
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.58 E-value=3.5e-13 Score=123.70 Aligned_cols=170 Identities=14% Similarity=0.108 Sum_probs=108.8
Q ss_pred ceEEEEEecCCEEEecccccCCC--ceEEEEEcC----------CCcEEEEEEEEecC-CCCeEEEEecCC-ccccccee
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG----------SPTKYRAQVEAVGH-ECDLAILIVESD-EFWEGMHF 205 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~~----------~g~~~~a~v~~~d~-~~DlAlLkv~~~-~~~~~~~~ 205 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+.+++ .+||||||++.+ .+.+.+.|
T Consensus 23 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v~p 102 (240)
T 1si5_H 23 HICGGSLIKESWVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFVST 102 (240)
T ss_dssp EEEEEEEEETTEEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSCCC
T ss_pred eEEEEEEeeCCEEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCceec
Confidence 57999999999999999999753 456666531 12234443333444 789999999876 45567889
Q ss_pred eecCCcc---cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccCCC--ceeeEEEe-----cccCCCCCCCcc
Q 016641 206 LELGDIP---FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHGA--TQLMAIQI-----DAAINPGNSGGP 269 (385)
Q Consensus 206 l~l~~~~---~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~~~--~~~~~i~~-----d~~i~~G~SGGP 269 (385)
+.|.... ..|+.+++.||...... ......+++...+....... .....+.. ....|.||||||
T Consensus 103 icLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgP 182 (240)
T 1si5_H 103 IDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYGGP 182 (240)
T ss_dssp CBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTTCE
T ss_pred cCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCCCc
Confidence 9997643 35899999999754221 12233333333232111100 01112322 246799999999
Q ss_pred ee-eCC---EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHHc
Q 016641 270 AI-MGN---KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVEH 309 (385)
Q Consensus 270 L~-~~G---~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~~ 309 (385)
|+ .++ .++||+++... .....+....+...++|+++..+.
T Consensus 183 L~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~i~~ 228 (240)
T 1si5_H 183 LVCEQHKMRMVLGVIVPGRGCAIPNRPGIFVRVAYYAKWIHKIILT 228 (240)
T ss_dssp EEEECSSSEEEEEEECSCSCSSCTTCCEEEEEGGGGHHHHHHHHSS
T ss_pred EEEEECCcEEEEEEEEECCCCCCCCCCcEEEEHHHHHHHHHHHHhc
Confidence 99 443 89999998643 112357778888889999887743
No 75
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.58 E-value=7.5e-14 Score=127.97 Aligned_cols=166 Identities=15% Similarity=0.126 Sum_probs=105.3
Q ss_pred eEEEEEecCCEEEecccccCCC-----ceEEEEEcC------CC--cEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 016641 141 TGSGFVIPGKKILTNAHVVADS-----TFVLVRKHG------SP--TKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (385)
Q Consensus 141 ~GSGfiI~~g~ILT~aHvv~~~-----~~i~V~~~~------~g--~~~~a~v~~~d~-------~~DlAlLkv~~~-~~ 199 (385)
.|+|.+|++.||||+|||+.+. ..+.|.+.. ++ +.+..+-+..++ .+||||||++.+ .+
T Consensus 29 ~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 108 (237)
T 2f91_A 29 FCGASIYNENYAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLTF 108 (237)
T ss_dssp EEEEEEEETTEEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCC
T ss_pred eEEEEEeeCCEEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCccc
Confidence 4999999999999999999753 456676531 12 345554444444 479999999876 45
Q ss_pred cccceeeecCCcc-cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccC-CCceeeEEEe-----cccCCCCC
Q 016641 200 WEGMHFLELGDIP-FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVH-GATQLMAIQI-----DAAINPGN 265 (385)
Q Consensus 200 ~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~-~~~~~~~i~~-----d~~i~~G~ 265 (385)
.+.+.|+.|.... ..++.+++.||...... ..+...+++...+..... .......+.. ....|.||
T Consensus 109 ~~~v~picLp~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GD 188 (237)
T 2f91_A 109 NDNVAPIALPEQGHTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQGD 188 (237)
T ss_dssp BTTBCCCBCCCTTCCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTC
T ss_pred CCceeeccCCCCCCCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCCCc
Confidence 6678999998654 56899999999753211 122333333322211110 1111122333 24679999
Q ss_pred CCcceeeCC----EEEEEEeeecC-C-CCceEEEEecchHHHHHHHH
Q 016641 266 SGGPAIMGN----KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 266 SGGPL~~~G----~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l 306 (385)
|||||+.++ .++||+++... . ....+....+...++++++.
T Consensus 189 SGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~ 235 (237)
T 2f91_A 189 SGGPLAASDTGSTYLAGIVSWGYGCARPGYPGVYTEVSYHVDWIKAN 235 (237)
T ss_dssp TTCEEEECTTSSCEEEEEEEEESSSSCTTCCEEEEEGGGSHHHHHHH
T ss_pred CCCCeEEecCCCEEEEEEEEecCCCCCCCCCcEEEEHHHhHHHHHHh
Confidence 999999333 89999998753 1 12246667777777777653
No 76
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.58 E-value=1.5e-13 Score=125.78 Aligned_cols=170 Identities=16% Similarity=0.138 Sum_probs=106.7
Q ss_pred cceEEEEEecCCEEEecccccCC----CceEEEEEcC----------CCcEEEEEEEEecC-CCCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG----------SPTKYRAQVEAVGH-ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~----~~~i~V~~~~----------~g~~~~a~v~~~d~-~~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.+ ...+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 21 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~~ 100 (234)
T 2asu_B 21 QHFCGGSLVKEQWILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQR 100 (234)
T ss_dssp CEEEEEEEEETTEEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSSS
T ss_pred CEEEEEEEEeCCEEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCCc
Confidence 35799999999999999999964 2445565421 12334444333443 689999999876 45667
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCCCCCc
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPGNSGG 268 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SGG 268 (385)
+.|+.|.... ..|+.+++.||...... ......+++...+............+.. ....|.|||||
T Consensus 101 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 180 (234)
T 2asu_B 101 VALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYGG 180 (234)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCCTTCTTC
T ss_pred EeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCCCCCCeeccCCCCC
Confidence 8999998643 35899999999754221 1222333333222211111111122332 24679999999
Q ss_pred cee-e-CC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 269 PAI-M-GN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 269 PL~-~-~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
||+ . +| .++||+++... .....+....+....+++++..+
T Consensus 181 PL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 226 (234)
T 2asu_B 181 PLACFTHNSWVLEGIIIPNRVCARSRWPAVFTRVSVFVDWIHKVMR 226 (234)
T ss_dssp EEEEEETTEEEEEEEECCCSSSSCTTCCEEEEEGGGSHHHHHHHC-
T ss_pred ceEEEECCeEEEEEEEEcCCCCCCCCCCeEEEEHHHHHHHHHHHhh
Confidence 999 4 33 79999998643 11235677778888888877543
No 77
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.58 E-value=2.1e-14 Score=131.94 Aligned_cols=181 Identities=18% Similarity=0.148 Sum_probs=110.6
Q ss_pred CCCCCCCCCCCCcceEEEEEecCCEEEecccccCC-------CceEEEEEcCCC-------cEEEEEEEEecC-------
Q 016641 127 NYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVAD-------STFVLVRKHGSP-------TKYRAQVEAVGH------- 185 (385)
Q Consensus 127 ~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~-------~~~i~V~~~~~g-------~~~~a~v~~~d~------- 185 (385)
...+||+........|+|.+|++.||||+|||+.+ ...+.|.+.... ..+..+-+..++
T Consensus 9 ~~~~Pw~v~l~~~~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~ 88 (242)
T 2qy0_B 9 MGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDES 88 (242)
T ss_dssp TTSSTTEEEEESSSEEEEEEETTTEEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCS
T ss_pred CCCCCcEEEEccCCCEEEEEEeCCEEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcC
Confidence 34556654433345799999999999999999963 234556653211 123343333333
Q ss_pred ---CCCeEEEEecCC-cccccceeeecCCcc---cCCCeEEEEecCCCCCC-----ceEEEeeEeecccccccC-----C
Q 016641 186 ---ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVEPTQYVH-----G 248 (385)
Q Consensus 186 ---~~DlAlLkv~~~-~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-----~~~~~G~Vs~~~~~~~~~-----~ 248 (385)
.+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+..... .
T Consensus 89 ~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~ 168 (242)
T 2qy0_B 89 YNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMD 168 (242)
T ss_dssp SCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCC
T ss_pred CCCCCcEEEEEECCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccc
Confidence 359999999876 456678999998654 35899999999754321 122222333222211100 0
Q ss_pred CceeeEEEe-----cccCCCCCCCccee-eCC-----EEEEEEeeecCCCCceEEEEecchHHHHHHHHH
Q 016641 249 ATQLMAIQI-----DAAINPGNSGGPAI-MGN-----KVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 249 ~~~~~~i~~-----d~~i~~G~SGGPL~-~~G-----~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
......+.. ....|.|||||||+ .++ .++||++++..-..+.+....+....+++++..
T Consensus 169 ~~~~~~~Ca~~~~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~~C~~~~~vyt~V~~y~~WI~~~~ 238 (242)
T 2qy0_B 169 VFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEM 238 (242)
T ss_dssp CCCTTEEEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSSSCEEEEEGGGGHHHHHHHT
T ss_pred cCCCCEEeccCCCCCCccccCCCCCcEEEEECCCCeEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHh
Confidence 001123333 34679999999999 544 599999987541123567777788888887765
No 78
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.57 E-value=1.5e-14 Score=130.59 Aligned_cols=156 Identities=19% Similarity=0.227 Sum_probs=101.2
Q ss_pred ceEEEEEecCCEEEecccccCCC--ceE----EEEEcC-----CCcEEEEEEEEec--------CCCCeEEEEecCCccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS--TFV----LVRKHG-----SPTKYRAQVEAVG--------HECDLAILIVESDEFW 200 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~--~~i----~V~~~~-----~g~~~~a~v~~~d--------~~~DlAlLkv~~~~~~ 200 (385)
..|+|++|++.||||+|||+.+. ..+ .|.+.. .+..+..+-+..+ ..+||||||++.+ +.
T Consensus 30 ~~CgGtLIs~~~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~-~~ 108 (215)
T 1p3c_A 30 SSCTGTLIAPNKILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTN-IG 108 (215)
T ss_dssp CEEEEEEEETTEEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSC-HH
T ss_pred ceEEEEEEeCCEEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCC-Cc
Confidence 57999999999999999999642 333 565431 1223444444333 3569999999985 55
Q ss_pred ccceeeecCCcc-cCCCeEEEEecCCCC------CCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-e
Q 016641 201 EGMHFLELGDIP-FLQQAVAVVGYPQGG------DNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-M 272 (385)
Q Consensus 201 ~~~~~l~l~~~~-~~G~~V~~iG~p~~~------~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~ 272 (385)
+.+.|++|.... ..|+.++++||+... ........+++...+. ....+...|.|||||||+ .
T Consensus 109 ~~v~pi~l~~~~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~~c~----------~~~~~~~~C~GDSGgPl~~~ 178 (215)
T 1p3c_A 109 NTVGYRSIRQVTNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTREDTN----------LAYYTIDTFSGNSGSAMLDQ 178 (215)
T ss_dssp HHHCCCCBCCCSCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEECSS----------EEEECCCCCTTCTTCEEECT
T ss_pred ccceeeecCCCcccCCCeEEEecCCCCCcccccceechhccCccCcccch----------heeeccccCCCCCCCeeEcc
Confidence 568899998654 569999999997321 1123333333322221 112356789999999999 6
Q ss_pred CCEEEEEEeeecCCCCceEEEEecchHHHHHHHH
Q 016641 273 GNKVAGVAFQNLSGAENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 273 ~G~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l 306 (385)
+|.++||++++..-....+....+....+++++.
T Consensus 179 ~g~lvGi~S~g~~c~~~p~v~t~v~~~~~WI~~~ 212 (215)
T 1p3c_A 179 NQQIVGVHNAGYSNGTINGGPKATAAFVEFINYA 212 (215)
T ss_dssp TSCEEEECCEEEGGGTEEEEEBCCHHHHHHHHHH
T ss_pred CCeEEEEEecccCCCccCceeEechHHHHHHHHH
Confidence 9999999998654112334444455556666554
No 79
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.57 E-value=5.6e-14 Score=129.08 Aligned_cols=170 Identities=18% Similarity=0.171 Sum_probs=109.6
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
...|+|.+|++.||||+|||+.+...+.|.+.. ..+.+..+.+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~~CgGtLIs~~~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (241)
T 2jkh_A 24 EGFCGGTILSEFYILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRMN 103 (241)
T ss_dssp CEEEEEEECSSSEEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBTT
T ss_pred CcEEEEEEeeCCEEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCCC
Confidence 357999999999999999999876667776631 12334555444443 469999999876 45667
Q ss_pred ceeeecCCcc------cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCCceeeEEEe-----cccCCCC
Q 016641 203 MHFLELGDIP------FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPG 264 (385)
Q Consensus 203 ~~~l~l~~~~------~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G 264 (385)
+.|+.|.... ..|+.+++.||...... ..+...+++...+............+.. ....|.|
T Consensus 104 v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~G 183 (241)
T 2jkh_A 104 VAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQG 183 (241)
T ss_dssp BCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCTT
T ss_pred EeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCCCeEEeeCCCCCCccCcC
Confidence 8999998643 24889999999643211 1222233332222111111011122332 2357999
Q ss_pred CCCccee--eCC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 265 NSGGPAI--MGN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 265 ~SGGPL~--~~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
||||||+ .+| .++||++++.. .....+....+....+|+++..+
T Consensus 184 DsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 233 (241)
T 2jkh_A 184 DSGGPHVTRFKDTYFVTGIVSWGEGCARKGKYGIYTKVTAFLKWIDRSMK 233 (241)
T ss_dssp TTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHTC
T ss_pred cCCCeeEEEECCEEEEEEEEEECCCCCCCCCceEEEEhHHHHHHHHHHhc
Confidence 9999999 356 59999998653 11235677888888888887653
No 80
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.57 E-value=4.9e-14 Score=128.53 Aligned_cols=169 Identities=20% Similarity=0.128 Sum_probs=107.6
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcCC-----CcEEEEEEEEecC-------CCCeEEEEecCCcccccceee
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS-----PTKYRAQVEAVGH-------ECDLAILIVESDEFWEGMHFL 206 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~-----g~~~~a~v~~~d~-------~~DlAlLkv~~~~~~~~~~~l 206 (385)
...|+|.+|++.||||+|||+.+...+.|.+... .+.+..+-+..++ .+||||||++...+.+.+.|+
T Consensus 27 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~v~pi 106 (230)
T 2hlc_A 27 RVWCGGSLIDNKWILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIPHVEYTDNIQPI 106 (230)
T ss_dssp EEEEEEEEEETTEEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECSCCCCCSSCCCC
T ss_pred CEEEEEEEeeCCEEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEecCCCcCCcEeee
Confidence 3579999999999999999999877777776421 2233333333333 479999999943566778999
Q ss_pred ecCCcc-----cCCCeEEEEecCCCCCC----ceEEEeeEeecccccccCC-CceeeEEEe----cccCCCCCCCcceee
Q 016641 207 ELGDIP-----FLQQAVAVVGYPQGGDN----ISVTKGVVSRVEPTQYVHG-ATQLMAIQI----DAAINPGNSGGPAIM 272 (385)
Q Consensus 207 ~l~~~~-----~~G~~V~~iG~p~~~~~----~~~~~G~Vs~~~~~~~~~~-~~~~~~i~~----d~~i~~G~SGGPL~~ 272 (385)
.|.... ..|+.+++.||...... .....-+++...+...... ......+.. ....|.|||||||+.
T Consensus 107 cLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl~~ 186 (230)
T 2hlc_A 107 RLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPFVL 186 (230)
T ss_dssp BCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEEEE
T ss_pred EcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCeeEE
Confidence 998643 24889999999764321 1222233333222111111 011122332 236799999999993
Q ss_pred --CCEEEEEEeeecC---CCCceEEEEecchHHHHHHHHH
Q 016641 273 --GNKVAGVAFQNLS---GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 273 --~G~vVGI~s~~~~---~~~~~~~aip~~~i~~~l~~l~ 307 (385)
++.++||+++... .....+....+....+++++..
T Consensus 187 ~~~~~l~Gi~S~g~~~~C~~~~p~vyt~V~~~~~WI~~~~ 226 (230)
T 2hlc_A 187 SDKNLLIGVVSFVSGAGCESGKPVGFSRVTSYMDWIQQNT 226 (230)
T ss_dssp GGGTEEEEEEEECCTTCTTSCCCEEEEEGGGGHHHHHHHH
T ss_pred CcCCEEEEEEEEeCCCCCCCCCCCEEEEhHHhHHHHHHhh
Confidence 4599999998652 1123455677777788877654
No 81
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.57 E-value=7.6e-14 Score=127.80 Aligned_cols=166 Identities=16% Similarity=0.137 Sum_probs=106.9
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCC--------CcEEEEEEEEecC---------CCCeEEEEecCC-cccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS--------PTKYRAQVEAVGH---------ECDLAILIVESD-EFWE 201 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~--------g~~~~a~v~~~d~---------~~DlAlLkv~~~-~~~~ 201 (385)
..|+|.+|++.||||+|||+.+...+.|.+... .+.+..+-+..++ .+||||||++.+ .+.+
T Consensus 28 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~~ 107 (236)
T 1elt_A 28 HTCGGSLIRQGWVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLNS 107 (236)
T ss_dssp EEEEEEEEETTEEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCSS
T ss_pred eEEEEEEEeCCEEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccCC
Confidence 579999999999999999998777777776421 2344454444443 569999999875 4556
Q ss_pred cceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccc--cCCCceeeEEEe---cccCCCCCC
Q 016641 202 GMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQY--VHGATQLMAIQI---DAAINPGNS 266 (385)
Q Consensus 202 ~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~--~~~~~~~~~i~~---d~~i~~G~S 266 (385)
.+.|+.|.... ..|+.+++.||...... ......+++...+... .........+.. +...|.|||
T Consensus 108 ~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GDS 187 (236)
T 1elt_A 108 AVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGDS 187 (236)
T ss_dssp SCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTCT
T ss_pred cEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCCC
Confidence 78899998643 35889999999754211 1222223332222211 000001122332 246799999
Q ss_pred Cccee--eCC--EEEEEEeeecC-C---CCceEEEEecchHHHHHHH
Q 016641 267 GGPAI--MGN--KVAGVAFQNLS-G---AENIGYIIPVPVIKHFITG 305 (385)
Q Consensus 267 GGPL~--~~G--~vVGI~s~~~~-~---~~~~~~aip~~~i~~~l~~ 305 (385)
||||+ .+| .++||+++... + ....+....+....+++++
T Consensus 188 GgPL~~~~~g~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~ 234 (236)
T 1elt_A 188 GGPLNCQVNGSYYVHGVTSFVSSSGCNASKKPTVFTRVSAYISWMNG 234 (236)
T ss_dssp TCEEEEEETTEEEEEEEEEECCSSCTTCTTCCEEEEEGGGGHHHHHH
T ss_pred CCeeEEEECCEEEEEEEEEEeCCCCCCCCCCCeEEEEHHHhHHHHHh
Confidence 99999 378 89999998642 1 1234667777777777765
No 82
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.56 E-value=1e-13 Score=130.97 Aligned_cols=191 Identities=19% Similarity=0.173 Sum_probs=115.5
Q ss_pred EEEeeecCCCCCCCCCCCC----CCcceEEEEEecCCEEEecccccCC--------CceEEEEEcCC---------CcEE
Q 016641 118 KIFTVSSSPNYGLPWQNKS----QRETTGSGFVIPGKKILTNAHVVAD--------STFVLVRKHGS---------PTKY 176 (385)
Q Consensus 118 ~I~~~~~~~~~~~p~~~~~----~~~~~GSGfiI~~g~ILT~aHvv~~--------~~~i~V~~~~~---------g~~~ 176 (385)
+|..........+||+... .....|.|.+|++.||||+|||+.+ ...+.|++... .+.+
T Consensus 30 rIvgG~~a~~~~~Pw~v~l~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~ 109 (289)
T 2bdy_A 30 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS 109 (289)
T ss_dssp -CBSCEECCTTSCTTEEEEEETTTTEEEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEE
T ss_pred eEECCEECCCCCCCCeEEEEECCCCCEEEEEEEecCCEEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceee
Confidence 4445555555566765432 1235799999999999999999942 34566665311 1223
Q ss_pred EEEEEEecC--------CCCeEEEEecCC-cccccceeeecCCcc------cCCCeEEEEecCCCCCC------------
Q 016641 177 RAQVEAVGH--------ECDLAILIVESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQGGDN------------ 229 (385)
Q Consensus 177 ~a~v~~~d~--------~~DlAlLkv~~~-~~~~~~~~l~l~~~~------~~G~~V~~iG~p~~~~~------------ 229 (385)
..+-+..++ .+||||||++.+ .+.+.+.|+.|.... ..|..+++.||......
T Consensus 110 ~v~~i~~Hp~y~~~~~~~~DIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~ 189 (289)
T 2bdy_A 110 MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 189 (289)
T ss_dssp EEEEEEECTTCBTTTTCBTCCEEEEESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSB
T ss_pred eeEEEEECCCCCCCCCCCCeEEEEEECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCcccccccc
Confidence 343333332 369999999876 456678999998643 34899999999753211
Q ss_pred -ceEEEeeEeecccccccCCCceeeEEEe--------cccCCCCCCCccee-eC---C--EEEEEEeeecC-C-CCceEE
Q 016641 230 -ISVTKGVVSRVEPTQYVHGATQLMAIQI--------DAAINPGNSGGPAI-MG---N--KVAGVAFQNLS-G-AENIGY 292 (385)
Q Consensus 230 -~~~~~G~Vs~~~~~~~~~~~~~~~~i~~--------d~~i~~G~SGGPL~-~~---G--~vVGI~s~~~~-~-~~~~~~ 292 (385)
..+...+++...+............+.. ....|.|||||||+ .+ | .++||++++.. + ....+.
T Consensus 190 L~~~~v~i~~~~~C~~~~~~~i~~~~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~v 269 (289)
T 2bdy_A 190 LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 269 (289)
T ss_dssp CEEEEEEBCCHHHHHHTCSSCCCTTEEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEE
T ss_pred ceEEEEEEECHHHhhccccCcCCCCEEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECCCCCCCCCCEE
Confidence 1122222222222111110011123333 23679999999999 43 3 59999998753 1 123567
Q ss_pred EEecchHHHHHHHHHH
Q 016641 293 IIPVPVIKHFITGVVE 308 (385)
Q Consensus 293 aip~~~i~~~l~~l~~ 308 (385)
..-+....+|+++..+
T Consensus 270 yt~V~~y~~WI~~~i~ 285 (289)
T 2bdy_A 270 YTHVFRLKKWIQKVID 285 (289)
T ss_dssp EEETGGGHHHHHHHHH
T ss_pred EEEHHHHHHHHHHHHH
Confidence 7888888888887654
No 83
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.56 E-value=8.1e-14 Score=127.55 Aligned_cols=180 Identities=17% Similarity=0.187 Sum_probs=110.3
Q ss_pred CCCCCCCCCCcceEEEEEecCCEEEecccccCC----CceEEEEEcC------CCcEEEEEEEEecC--------CCCeE
Q 016641 129 GLPWQNKSQRETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG------SPTKYRAQVEAVGH--------ECDLA 190 (385)
Q Consensus 129 ~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~----~~~i~V~~~~------~g~~~~a~v~~~d~--------~~DlA 190 (385)
.+||.........|+|.+|++.||||+|||+.+ ...+.|.+.. ....+..+.+..++ .+|||
T Consensus 11 ~~Pw~v~l~~~~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIA 90 (242)
T 3tvj_B 11 DFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIA 90 (242)
T ss_dssp SSTTEEEEESSEEEEEEEETTTEEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCE
T ss_pred CCCCEEEEecCCcEEEEEecCCEEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEE
Confidence 445543332345799999999999999999953 4456666532 11333444344333 46999
Q ss_pred EEEecCC-cccccceeeecCCcc-----cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccCC------Ccee
Q 016641 191 ILIVESD-EFWEGMHFLELGDIP-----FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHG------ATQL 252 (385)
Q Consensus 191 lLkv~~~-~~~~~~~~l~l~~~~-----~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~~------~~~~ 252 (385)
|||++.+ .+.+.+.|+.|.... ..|+.+.+.||...... ..+...+++...+...... ....
T Consensus 91 Ll~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~ 170 (242)
T 3tvj_B 91 LIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTA 170 (242)
T ss_dssp EEEESSCCCCBTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCT
T ss_pred EEEECCccccCCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccC
Confidence 9999876 456688999998643 35899999999754221 1222223332222111000 0111
Q ss_pred eEEEe-----cccCCCCCCCccee-eC---C--EEEEEEeeecCC---CCceEEEEecchHHHHHHHHHH
Q 016641 253 MAIQI-----DAAINPGNSGGPAI-MG---N--KVAGVAFQNLSG---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 253 ~~i~~-----d~~i~~G~SGGPL~-~~---G--~vVGI~s~~~~~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
..+.. +...|.|||||||+ .+ | .++||++++..+ ....+....+...++|+++..+
T Consensus 171 ~~~Ca~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~i~ 240 (242)
T 3tvj_B 171 NMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENIIS 240 (242)
T ss_dssp TEEEESCTTCCSBCCTTCTTCEEEEEETTTTEEEEEEEEEEEESSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CeEEECCCCCCCccccCCCCCeEEEEeCCCCcEEEEEEEEeCCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 23333 34679999999999 43 2 499999987321 1224677888888888887653
No 84
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.56 E-value=9.2e-14 Score=127.24 Aligned_cols=169 Identities=15% Similarity=0.132 Sum_probs=106.4
Q ss_pred ceEEEEEecCCEEEecccccCCC--ceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWE 201 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~ 201 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+
T Consensus 26 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 105 (238)
T 1ym0_A 26 HFCGGSIINDRWVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFDI 105 (238)
T ss_dssp EEEEEEEEETTEEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCSS
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCccccC
Confidence 57999999999999999999764 556676531 12344554444443 479999999876 4556
Q ss_pred cceeeecCCcc--cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccccCC-CceeeEEEe-------cccCCC
Q 016641 202 GMHFLELGDIP--FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYVHG-ATQLMAIQI-------DAAINP 263 (385)
Q Consensus 202 ~~~~l~l~~~~--~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~~~-~~~~~~i~~-------d~~i~~ 263 (385)
.+.|+.|.... ..++.+++.||...... ..+...+++...+...... ......+.. +...|.
T Consensus 106 ~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C~ 185 (238)
T 1ym0_A 106 NVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSCQ 185 (238)
T ss_dssp SCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBCCT
T ss_pred cccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCccCC
Confidence 78999998644 25899999999753211 1122223332222111110 011112322 156799
Q ss_pred CCCCccee-eC--C--EEEEEEeeecC-CCCceEEEEecchHHHHHHHHHH
Q 016641 264 GNSGGPAI-MG--N--KVAGVAFQNLS-GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 264 G~SGGPL~-~~--G--~vVGI~s~~~~-~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|||||||+ .+ | .++||++++.. +....+....+....+++++..+
T Consensus 186 GDsGgPL~~~~~~~~~~l~Gi~S~g~~C~~~~p~vyt~v~~~~~WI~~~i~ 236 (238)
T 1ym0_A 186 GDSGGPLSVKDGSGIFSLVGIVSWGIGCASGYPGVYSRVGFHAGWITDTIT 236 (238)
T ss_dssp TTTTCEEEEECTTCCEEEEEEEEECSSSSSSSCEEEEEHHHHHHHHHHHHH
T ss_pred CccCCeeEEECCCCCEEEEEEEeECCCCCCCCCcEEEEHHHhHHHHHHHhc
Confidence 99999999 53 4 79999998643 11234566777777777776554
No 85
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.56 E-value=4.8e-13 Score=122.49 Aligned_cols=168 Identities=17% Similarity=0.160 Sum_probs=106.1
Q ss_pred ceEEEEEecCCEEEecccccCCC--------ceEEEEEcC---------CCcEEEEEEEEecC-------CCCeEEEEec
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS--------TFVLVRKHG---------SPTKYRAQVEAVGH-------ECDLAILIVE 195 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~--------~~i~V~~~~---------~g~~~~a~v~~~d~-------~~DlAlLkv~ 195 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+||||||++
T Consensus 25 ~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~ 104 (241)
T 3ncl_A 25 HICGASLISPNWLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLELE 104 (241)
T ss_dssp EEEEEEECSSSEEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEES
T ss_pred eEEEEEEeeCCEEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEEC
Confidence 57999999999999999999642 345665421 12445555555554 4799999998
Q ss_pred CC-cccccceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCCCceeeEEEe-----cc
Q 016641 196 SD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHGATQLMAIQI-----DA 259 (385)
Q Consensus 196 ~~-~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~ 259 (385)
.+ .+.+.+.|+.|.... ..|+.+++.||...... ......+++...+............+.. ..
T Consensus 105 ~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~ 184 (241)
T 3ncl_A 105 KPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLSGGV 184 (241)
T ss_dssp SCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCSS
T ss_pred CCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcccCCCCCeEEeCCCCCCC
Confidence 76 456678899997543 35899999999643211 1222223332222211111111122332 34
Q ss_pred cCCCCCCCccee-e--CCE--EEEEEeeecC--CCCceEEEEecchHHHHHHHHH
Q 016641 260 AINPGNSGGPAI-M--GNK--VAGVAFQNLS--GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 260 ~i~~G~SGGPL~-~--~G~--vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~ 307 (385)
..|.|||||||+ . +|+ ++||++++.. .....+....+...++++++..
T Consensus 185 ~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~~c~~~~~p~vyt~v~~y~~WI~~~~ 239 (241)
T 3ncl_A 185 DSCQGDSGGPLSSVEADGRIFQAGVVSWGDGCAQRNKPGVYTRLPLFRDWIKENT 239 (241)
T ss_dssp BCCTTCTTCEEEEECTTSCEEEEEEEEECSSSSCTTCCEEEEESGGGHHHHHHHH
T ss_pred ccCCCcCCCCEEEEcCCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 679999999998 4 454 8999998654 1123567777888888887643
No 86
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.56 E-value=1.6e-13 Score=125.86 Aligned_cols=169 Identities=18% Similarity=0.164 Sum_probs=107.6
Q ss_pred cceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~ 199 (385)
...|+|.+|++.||||+|||+.+. ..+.|.+.. +.+.+..+-+..++ .+||||||++.+ .+
T Consensus 26 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (238)
T 3bg8_A 26 RHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 105 (238)
T ss_dssp EEEEEEEEEETTEEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCCC
T ss_pred cEEEEEEEeeCCEEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCcccc
Confidence 357999999999999999999754 456666421 23445555444544 479999999876 45
Q ss_pred cccceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCC-CceeeEEEe-----cccCCC
Q 016641 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHG-ATQLMAIQI-----DAAINP 263 (385)
Q Consensus 200 ~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~-~~~~~~i~~-----d~~i~~ 263 (385)
.+.+.|+.|.... ..++.+++.||...... ..+...+++...+...... ......+.. ....|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (238)
T 3bg8_A 106 TDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACK 185 (238)
T ss_dssp BTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCCT
T ss_pred CCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcCC
Confidence 6678999998643 34889999999753211 1222233333222111111 011122333 246799
Q ss_pred CCCCccee-e-CC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHH
Q 016641 264 GNSGGPAI-M-GN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 264 G~SGGPL~-~-~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~ 307 (385)
|||||||+ . +| .++||++++.. .....+...-+....+++++..
T Consensus 186 GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 235 (238)
T 3bg8_A 186 GDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEKT 235 (238)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHH
T ss_pred CCCCcceEEEECCeEEEEEEEEECCCCCCCCCCcEEEeHHHHHHHHHHHH
Confidence 99999999 4 56 59999998643 1123566777788888887754
No 87
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.55 E-value=1.1e-13 Score=125.64 Aligned_cols=168 Identities=20% Similarity=0.210 Sum_probs=107.1
Q ss_pred eEEEEEecCCEEEecccccCC--CceEEEEEcC-------CCcEEEEEEEEec------CCCCeEEEEecCC-cccc-cc
Q 016641 141 TGSGFVIPGKKILTNAHVVAD--STFVLVRKHG-------SPTKYRAQVEAVG------HECDLAILIVESD-EFWE-GM 203 (385)
Q Consensus 141 ~GSGfiI~~g~ILT~aHvv~~--~~~i~V~~~~-------~g~~~~a~v~~~d------~~~DlAlLkv~~~-~~~~-~~ 203 (385)
.|+|.+|++.||||+|||+.+ ...+.|.+.. ++..+..+.+..+ ..+||||||++.+ .+.+ .+
T Consensus 27 ~CgGtLI~~~~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~v 106 (228)
T 3h7o_A 27 TCGGAILSQWFVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLKS 106 (228)
T ss_dssp EEEEEESSSSEEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSSS
T ss_pred EeeeEEeeCCEEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCccccccccc
Confidence 799999999999999999953 3445555431 1122222222222 2479999999876 4455 67
Q ss_pred eeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccC----CCceeeEEEecccCCCCCCCcc
Q 016641 204 HFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVH----GATQLMAIQIDAAINPGNSGGP 269 (385)
Q Consensus 204 ~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~----~~~~~~~i~~d~~i~~G~SGGP 269 (385)
+|+.|.... ..|+.+++.||...... ..+...+++...+..... ..........+...|.||||||
T Consensus 107 ~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGgP 186 (228)
T 3h7o_A 107 KPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGDP 186 (228)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTCE
T ss_pred ccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCCc
Confidence 889998654 45899999999754321 123333443322221111 1111111122356799999999
Q ss_pred eeeCCEEEEEEeeecC-CCCceEEEEecchHHHHHHHHHH
Q 016641 270 AIMGNKVAGVAFQNLS-GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 270 L~~~G~vVGI~s~~~~-~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
|+.+++++||+++... .....+....+...++++++..+
T Consensus 187 l~~~~~l~Gi~S~g~~c~~~~p~vyt~v~~~~~WI~~~i~ 226 (228)
T 3h7o_A 187 TVQQDTLVGVAAYFPKRPEGAPEVFTKVGSYVSWIQDIIK 226 (228)
T ss_dssp EEETTEEEEEECCCTTCCTTCCEEEEEGGGTHHHHHHHHT
T ss_pred ceecCeEEEEEeecCcCCCCCCcEEEEHHHHHHHHHHHhh
Confidence 9988999999998644 11235677888888888888764
No 88
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.55 E-value=1.8e-13 Score=125.68 Aligned_cols=169 Identities=15% Similarity=0.148 Sum_probs=107.5
Q ss_pred ceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFW 200 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~ 200 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. +.+.+..+-+..++ .+||||||++.+ .+.
T Consensus 27 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 2any_A 27 HLCGGSLIGHQWVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEYT 106 (241)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCCCB
T ss_pred eEEEEEEecCCEEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCcccCC
Confidence 57999999999999999999753 345565421 12233444444443 479999999876 456
Q ss_pred ccceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCC-CceeeEEEe-----cccCCCC
Q 016641 201 EGMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHG-ATQLMAIQI-----DAAINPG 264 (385)
Q Consensus 201 ~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~-~~~~~~i~~-----d~~i~~G 264 (385)
+.+.|+.|.... ..|+.+++.||...... ..+...+++...+...... ......+.. ....|.|
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~G 186 (241)
T 2any_A 107 EFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACKG 186 (241)
T ss_dssp TTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCCTT
T ss_pred CCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccCCC
Confidence 678899997643 45899999999753221 1222333333222111110 011122332 2457999
Q ss_pred CCCccee-e-CC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 265 NSGGPAI-M-GN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 265 ~SGGPL~-~-~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
||||||+ . +| .++||+++... .....+....+...++++++..+
T Consensus 187 DsGgPl~~~~~~~~~l~GI~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~~ 236 (241)
T 2any_A 187 DSGGPLVCKHNGMWRLVGITSWGEGCARREQPGVYTKVAEYMDWILEKTQ 236 (241)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHS
T ss_pred CCCCcEEEEECCEEEEEEEEEecCCCCCCCCCeEEEEHHHhHHHHHHHhh
Confidence 9999999 4 56 69999998653 12235677788888888887664
No 89
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.55 E-value=2.2e-13 Score=124.55 Aligned_cols=168 Identities=16% Similarity=0.103 Sum_probs=106.6
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC---------CCCeEEEEecCC-cccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH---------ECDLAILIVESD-EFWE 201 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~---------~~DlAlLkv~~~-~~~~ 201 (385)
..|+|.+|++.||||+|||+.+...+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+
T Consensus 24 ~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~~~ 103 (235)
T 2wph_S 24 AFCGGSIVNEKWIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLNS 103 (235)
T ss_dssp TCEEEEEEETTEEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCCBT
T ss_pred eeEEEEEEeCCEEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcCCC
Confidence 57999999999999999999876667776531 12334444333332 369999999876 4556
Q ss_pred cceeeecCCcc-----cCCCeEEEEecCCCCC-------CceEEEeeEeecccccccCCCceeeEEEe-----cccCCCC
Q 016641 202 GMHFLELGDIP-----FLQQAVAVVGYPQGGD-------NISVTKGVVSRVEPTQYVHGATQLMAIQI-----DAAINPG 264 (385)
Q Consensus 202 ~~~~l~l~~~~-----~~G~~V~~iG~p~~~~-------~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-----d~~i~~G 264 (385)
.+.|+.|.... ..++.+++.||..... ...+...+++...+............+.. ....|.|
T Consensus 104 ~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~G 183 (235)
T 2wph_S 104 YVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSCQG 183 (235)
T ss_dssp TBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCCTT
T ss_pred CccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccCCC
Confidence 78899998643 1378999999964321 01222333333222111111111123333 2357999
Q ss_pred CCCccee--eCC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHH
Q 016641 265 NSGGPAI--MGN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 265 ~SGGPL~--~~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~ 307 (385)
||||||+ .+| .++||++++.. .....+....+....+|+++..
T Consensus 184 DsGgPl~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 232 (235)
T 2wph_S 184 DSGGPHVTEVEGTSFLTGIISWGEECAMKGKYGIYTKVSRYVNWIKEKT 232 (235)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHC
T ss_pred CCCCceEEeECCeEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 9999999 466 49999998653 1123567777788888887653
No 90
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.55 E-value=1.8e-13 Score=126.23 Aligned_cols=169 Identities=18% Similarity=0.193 Sum_probs=107.3
Q ss_pred ceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEec-CCCCeEEEEecCC-cccccceee
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVG-HECDLAILIVESD-EFWEGMHFL 206 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d-~~~DlAlLkv~~~-~~~~~~~~l 206 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+...-+..+ ..+||||||++.+ .+.+.+.|+
T Consensus 42 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~pi 121 (247)
T 1ddj_A 42 HFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVIPA 121 (247)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCCCC
T ss_pred eEEEEEEeeCCEEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEEee
Confidence 57999999999999999999753 345665531 1123333333333 3689999999876 456678899
Q ss_pred ecCCcc---cCCCeEEEEecCCCCC------CceEEEeeEeecccccc--cCCCceeeEEEe-----cccCCCCCCCcce
Q 016641 207 ELGDIP---FLQQAVAVVGYPQGGD------NISVTKGVVSRVEPTQY--VHGATQLMAIQI-----DAAINPGNSGGPA 270 (385)
Q Consensus 207 ~l~~~~---~~G~~V~~iG~p~~~~------~~~~~~G~Vs~~~~~~~--~~~~~~~~~i~~-----d~~i~~G~SGGPL 270 (385)
.|.... ..|+.+++.||..... ...+...+++...+... .........+.. ....|.|||||||
T Consensus 122 cLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL 201 (247)
T 1ddj_A 122 CLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGGPL 201 (247)
T ss_dssp BCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTCEE
T ss_pred ecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcCcE
Confidence 997543 3488999999975421 12233334443322211 011111122333 2357999999999
Q ss_pred e-eC-C--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 271 I-MG-N--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 271 ~-~~-G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
+ .+ | .++||++++.. .....+....+....+|+++..+
T Consensus 202 ~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~~ 245 (247)
T 1ddj_A 202 VCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 245 (247)
T ss_dssp EEECSSSEEEEEEECGGGCCBBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred EEEECCcEEEEEEEEECCCCCCCCCCEEEEEhHHhHHHHHHHhh
Confidence 9 44 3 69999998653 11234667778888888887664
No 91
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.54 E-value=1e-13 Score=127.29 Aligned_cols=166 Identities=16% Similarity=0.182 Sum_probs=104.8
Q ss_pred ceEEEEEecCCEEEecccccCC--CceEEEEEcC-------CCcEEEEEEEEecCC---------CCeEEEEecCC-ccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVAD--STFVLVRKHG-------SPTKYRAQVEAVGHE---------CDLAILIVESD-EFW 200 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~--~~~i~V~~~~-------~g~~~~a~v~~~d~~---------~DlAlLkv~~~-~~~ 200 (385)
..|+|.+|++.||||+|||+.+ ...+.|.+.. +.+.+..+-+..+++ +||||||++.+ .+.
T Consensus 27 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1m9u_A 27 HSCGASLLSSTSALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISLG 106 (241)
T ss_dssp EEEEEEECSSSEEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCCC
T ss_pred eeeEEEEEeCCEEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCccccC
Confidence 5799999999999999999986 4566776531 234455555555543 49999999876 456
Q ss_pred ccceeeecCCc-c--cCCCeEEEEecCCCCCC-------ceEEEeeEeeccccc-ccC-CC--ceeeEEEe-----cccC
Q 016641 201 EGMHFLELGDI-P--FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQ-YVH-GA--TQLMAIQI-----DAAI 261 (385)
Q Consensus 201 ~~~~~l~l~~~-~--~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~-~~~-~~--~~~~~i~~-----d~~i 261 (385)
+.+.|+.|... . ..|+.+++.||...... ......+++...+.. +.. .. .....+.. ....
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~ 186 (241)
T 1m9u_A 107 GNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTGA 186 (241)
T ss_dssp SSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCBC
T ss_pred CCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCee
Confidence 67889999865 2 35899999999653211 122222233222211 110 00 11122333 2357
Q ss_pred CCCCCCccee-eCC--EEEEEEee--ecC-C---CCceEEEEecchHHHHHHH
Q 016641 262 NPGNSGGPAI-MGN--KVAGVAFQ--NLS-G---AENIGYIIPVPVIKHFITG 305 (385)
Q Consensus 262 ~~G~SGGPL~-~~G--~vVGI~s~--~~~-~---~~~~~~aip~~~i~~~l~~ 305 (385)
|.|||||||+ .+| .++||+++ ... + ....+....+....+++++
T Consensus 187 C~GDSGgPL~~~~~~~~l~Gi~S~~~~~g~~C~~~~~p~vyt~V~~~~~WI~~ 239 (241)
T 1m9u_A 187 CNGDSGGPLNCPDGGTRVVGVTSWVVSSGLGACLPDYPSVYTRVSAYLGWIGD 239 (241)
T ss_dssp CTTCTTCEEEEESSSEEEEEEEEECCBCTTSCBCTTSCEEEEEGGGTHHHHHH
T ss_pred ecCcCCccEEEeCCCEEEEEEEEEeccCCCCccCCCCCEEEEEhHHhHhHHhh
Confidence 9999999999 646 89999998 321 1 1234666777777777765
No 92
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.54 E-value=2.6e-13 Score=125.73 Aligned_cols=169 Identities=14% Similarity=0.104 Sum_probs=107.9
Q ss_pred ceEEEEEecCCEEEecccccCC---CceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVAD---STFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFW 200 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~---~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~ 200 (385)
..|+|.+|++.||||+|||+.+ ...+.|.+.. +.+.+..+-+..++ .+||||||++.+ .+.
T Consensus 24 ~~CgGtLI~~~~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~ 103 (261)
T 3gyl_B 24 HVCGGSLVSEQWVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPITFS 103 (261)
T ss_dssp EEEEEEECSSSEEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCCCB
T ss_pred eEEEEEEEcCCEEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCccCC
Confidence 5799999999999999999963 3456666531 12244444455554 359999999876 456
Q ss_pred ccceeeecCCcc---cCCCeEEEEecCCCCC---------CceEEEeeEeecccccccC--------CCceeeEEEe---
Q 016641 201 EGMHFLELGDIP---FLQQAVAVVGYPQGGD---------NISVTKGVVSRVEPTQYVH--------GATQLMAIQI--- 257 (385)
Q Consensus 201 ~~~~~l~l~~~~---~~G~~V~~iG~p~~~~---------~~~~~~G~Vs~~~~~~~~~--------~~~~~~~i~~--- 257 (385)
+.+.|+.|.... ..|+.+++.||..... ...+...+++...+..... .......+..
T Consensus 104 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~~~ 183 (261)
T 3gyl_B 104 RYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAGYV 183 (261)
T ss_dssp TTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEESCS
T ss_pred CceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeCCC
Confidence 678999997543 3589999999974321 1223333444322211110 0011122333
Q ss_pred --cccCCCCCCCccee-e-CC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 258 --DAAINPGNSGGPAI-M-GN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 258 --d~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
....|.|||||||+ . +| .++||++++.. .....+....+...++|+++..+
T Consensus 184 ~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~~c~~~~~p~vyt~v~~~~~WI~~~i~ 242 (261)
T 3gyl_B 184 EGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGDACGARNRPGVYTLASSYASWIQSKVT 242 (261)
T ss_dssp SSSCBCCTTTTTCEEEEEETTEEEEEEEECCCCCSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCCCccCCCCCCCeeEEEeCCEEEEEEEEecCCCCCCCCCCCEEEEHHHhHHHHHHHHh
Confidence 24579999999999 3 56 59999998643 11235677788888888887664
No 93
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.54 E-value=3.2e-13 Score=122.45 Aligned_cols=176 Identities=18% Similarity=0.172 Sum_probs=106.4
Q ss_pred CCCCCCCCCCCCcceEEEEEecCCEEEecccccCCC---ceEEEEEcC------CCcEEEEEEEEecC-------CCCeE
Q 016641 127 NYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG------SPTKYRAQVEAVGH-------ECDLA 190 (385)
Q Consensus 127 ~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~------~g~~~~a~v~~~d~-------~~DlA 190 (385)
...+||..... ..|+|.+|++.||||+|||+.+. ..+.|.+.. +...+..+-+..++ .+|||
T Consensus 9 ~~~~Pw~v~l~--~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIA 86 (224)
T 3beu_A 9 QGEFPFMVRLS--MGCGGALYAQDIVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWA 86 (224)
T ss_dssp TTTSTTEEEET--TTEEEEEEETTEEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCE
T ss_pred CCCCCEEEEEC--CceeEEEeeCCEEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEE
Confidence 34566655432 35999999999999999999864 345565531 12344544444444 36999
Q ss_pred EEEecCCcccccceeeecCCcc-cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccC-CCceeeEEEe----
Q 016641 191 ILIVESDEFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVH-GATQLMAIQI---- 257 (385)
Q Consensus 191 lLkv~~~~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~-~~~~~~~i~~---- 257 (385)
|||++.+. .++++++.... ..++.+++.||...... ......+++...+..... .......+..
T Consensus 87 Ll~L~~~v---~~~~i~l~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~ 163 (224)
T 3beu_A 87 LIKLAQPI---NQPTLKIATTTAYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDT 163 (224)
T ss_dssp EEEESSCC---CSCCCEECCSSTTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSS
T ss_pred EEEeCCCC---CCCccccccccccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCC
Confidence 99999874 35677776543 34678999999753221 122233333322211111 0011122332
Q ss_pred -cccCCCCCCCccee-eCC----EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHH
Q 016641 258 -DAAINPGNSGGPAI-MGN----KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 258 -d~~i~~G~SGGPL~-~~G----~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~ 307 (385)
....|.|||||||+ .++ .++||+++... + ....+....+....+++++..
T Consensus 164 ~~~~~C~GDsGgPl~~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 221 (224)
T 3beu_A 164 KQEDTCQGDSGGPMFRKDNADEWVQVGIVSWGEGCARKGKYGVYTEVSTFASAIASAA 221 (224)
T ss_dssp SSCBCCTTCTTCEEEEECTTSCEEEEEEEEEESSSSCTTCCEEEEEHHHHHHHHHHHH
T ss_pred CCCcCCCCcCCCeeEEecCCCCEEEEEEeccCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 24679999999999 542 79999998754 1 123466677777777777654
No 94
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.54 E-value=1.6e-13 Score=126.92 Aligned_cols=169 Identities=18% Similarity=0.166 Sum_probs=104.1
Q ss_pred ceEEEEEecCCEEEecccccC--------CCceEEEEEcCC---------CcEEEEEEEEecC--------CCCeEEEEe
Q 016641 140 TTGSGFVIPGKKILTNAHVVA--------DSTFVLVRKHGS---------PTKYRAQVEAVGH--------ECDLAILIV 194 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~--------~~~~i~V~~~~~---------g~~~~a~v~~~d~--------~~DlAlLkv 194 (385)
..|+|.+|++.||||+|||+. ....+.|.+... .+....+-+..++ .+||||||+
T Consensus 26 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L 105 (259)
T 3rm2_H 26 LLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMKL 105 (259)
T ss_dssp EEEEEEECSSSEEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEEE
T ss_pred eEEEEEEEeCCEEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEEEe
Confidence 479999999999999999994 234556665311 1122233333332 359999999
Q ss_pred cCC-cccccceeeecCCcc------cCCCeEEEEecCCCCCC-------------ceEEEeeEeecccccccCCCceeeE
Q 016641 195 ESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQGGDN-------------ISVTKGVVSRVEPTQYVHGATQLMA 254 (385)
Q Consensus 195 ~~~-~~~~~~~~l~l~~~~------~~G~~V~~iG~p~~~~~-------------~~~~~G~Vs~~~~~~~~~~~~~~~~ 254 (385)
+.+ .+.+.+.|+.|.... ..|..+.+.||...... ..+...+++...+............
T Consensus 106 ~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~ 185 (259)
T 3rm2_H 106 KKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDNM 185 (259)
T ss_dssp SSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTTE
T ss_pred CCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCCCce
Confidence 876 456678999998643 34899999999753221 1122222222112111111111123
Q ss_pred EEec--------ccCCCCCCCccee-eC---C--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 255 IQID--------AAINPGNSGGPAI-MG---N--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 255 i~~d--------~~i~~G~SGGPL~-~~---G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
+... ...|.|||||||+ .+ | .++||++++.. . ....+....+...++|+++..+
T Consensus 186 ~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~i~ 255 (259)
T 3rm2_H 186 FCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGFYTHVFRLKKWIQKVID 255 (259)
T ss_dssp EEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECSSSSCTTCCEEEEETGGGHHHHHHHHH
T ss_pred EeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHHH
Confidence 3332 2679999999999 43 3 79999998744 1 1234677888888888887653
No 95
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.54 E-value=2.2e-13 Score=126.14 Aligned_cols=169 Identities=14% Similarity=0.117 Sum_probs=108.4
Q ss_pred ceEEEEEecCCEEEecccccCCCc---eEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADST---FVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFW 200 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~---~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~ 200 (385)
..|+|.+|++.||||+|||+.+.. .+.|.+.. ..+.+..+-+..++ .+||||||++.+ .+.
T Consensus 24 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~~ 103 (254)
T 2bz6_H 24 QLCGGTLINTIWVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVLT 103 (254)
T ss_dssp EEEEEEECSSSEEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCCCB
T ss_pred cEEEEEEecCCEEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCccccC
Confidence 579999999999999999998644 36776531 12344444444443 479999999876 456
Q ss_pred ccceeeecCCcc------cCCCeEEEEecCCCCCC-------ceEEEeeEeecccccccCC-----CceeeEEEe-----
Q 016641 201 EGMHFLELGDIP------FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYVHG-----ATQLMAIQI----- 257 (385)
Q Consensus 201 ~~~~~l~l~~~~------~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~~~-----~~~~~~i~~----- 257 (385)
+.+.|+.|.... ..|+.+++.||...... ......+++...+...... ......+..
T Consensus 104 ~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~ 183 (254)
T 2bz6_H 104 DHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSDG 183 (254)
T ss_dssp TTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSSS
T ss_pred CCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCCCC
Confidence 678999998643 24889999999743211 1222233332222111100 011123333
Q ss_pred cccCCCCCCCccee--eCC--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 258 DAAINPGNSGGPAI--MGN--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 258 d~~i~~G~SGGPL~--~~G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
....|.|||||||+ .+| .++||++++.. . ....+....+....+|+++..+
T Consensus 184 ~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 240 (254)
T 2bz6_H 184 SKDSCKGDSGGPHATHYRGTWYLTGIVSWGQGCATVGHFGVYTRVSQYIEWLQKLMR 240 (254)
T ss_dssp SCBCCGGGTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHHHT
T ss_pred CCccccccCCCceEEeECCEEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 23579999999999 466 59999998653 1 1235677888888899988775
No 96
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.53 E-value=5.3e-13 Score=121.83 Aligned_cols=168 Identities=15% Similarity=0.139 Sum_probs=106.3
Q ss_pred ceEEEEEecCCEEEecccccCCC---ceEEEEEcC----CCcEEEEEEEEecC-------CCCeEEEEecCC-cccccce
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMH 204 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~----~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~ 204 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. +...+..+-+..++ .+||||||++.+ .+.+.+.
T Consensus 24 ~~CgGtLIs~~~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v~ 103 (232)
T 2oq5_A 24 HRCGATLINATWLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAVH 103 (232)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSSSC
T ss_pred eeEEEEEEcCCEEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCcee
Confidence 57999999999999999999753 356666531 23344444444443 469999999876 4566788
Q ss_pred eeecCCcc---cCCCeEEEEecCCCCC-------CceEEEeeEeeccccccc--CCCceeeEEEe-----cccCCCCCCC
Q 016641 205 FLELGDIP---FLQQAVAVVGYPQGGD-------NISVTKGVVSRVEPTQYV--HGATQLMAIQI-----DAAINPGNSG 267 (385)
Q Consensus 205 ~l~l~~~~---~~G~~V~~iG~p~~~~-------~~~~~~G~Vs~~~~~~~~--~~~~~~~~i~~-----d~~i~~G~SG 267 (385)
|+.|.... ..|+.+++.||..... ...+..-+++...+.... ........+.. ....|.||||
T Consensus 104 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 183 (232)
T 2oq5_A 104 RVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDSG 183 (232)
T ss_dssp CCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCTT
T ss_pred EeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCCC
Confidence 99998643 3589999999975321 112223333332222110 00011122332 2467999999
Q ss_pred ccee-eCC----EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHH
Q 016641 268 GPAI-MGN----KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 268 GPL~-~~G----~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~ 307 (385)
|||+ .++ .++||++++.. . ....+....+...++++++..
T Consensus 184 gPL~~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~ 230 (232)
T 2oq5_A 184 GPLVSSDARDIWYLAGIVSWGDECAKPNKPGVYTRVTALRDWITSKT 230 (232)
T ss_dssp CEEEEECTTSCEEEEEEEEECSSSSBTTBCEEEEETGGGHHHHHHHH
T ss_pred CcEEEECCCCCEEEEEEEEeCCCCCCCCCCeEEEEhHHhHHHHHHHh
Confidence 9999 543 69999998643 1 123466777788888877653
No 97
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.53 E-value=2.7e-13 Score=127.27 Aligned_cols=167 Identities=20% Similarity=0.225 Sum_probs=103.4
Q ss_pred cceEEEEEecCCEEEecccccCCC------ceEEEEEcC-------------------CCcEEEEEEEEecC--------
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS------TFVLVRKHG-------------------SPTKYRAQVEAVGH-------- 185 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~------~~i~V~~~~-------------------~g~~~~a~v~~~d~-------- 185 (385)
...|+|.+|++.||||+|||+.+. ....|++.. ..+.+..+-+..++
T Consensus 50 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 129 (278)
T 2olg_A 50 QFACGGSLINNRYIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKD 129 (278)
T ss_dssp EEEEEEEECSSSEEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSS
T ss_pred ceeEEEEEEeCCEEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCC
Confidence 357999999999999999999752 345666531 02233343333332
Q ss_pred -CCCeEEEEecCC-cccccceeeecCCcc---cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccCC---Cce
Q 016641 186 -ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHG---ATQ 251 (385)
Q Consensus 186 -~~DlAlLkv~~~-~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~~---~~~ 251 (385)
.+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+...... ...
T Consensus 130 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~ 209 (278)
T 2olg_A 130 RYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR 209 (278)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCC
T ss_pred CCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccCC
Confidence 479999999876 456678999997643 45899999999753221 1223333333333211110 011
Q ss_pred eeEEEe----cccCCCCCCCccee-e--CC--EEEEEEeeecC-CC-CceEEEEecchHHHHHHH
Q 016641 252 LMAIQI----DAAINPGNSGGPAI-M--GN--KVAGVAFQNLS-GA-ENIGYIIPVPVIKHFITG 305 (385)
Q Consensus 252 ~~~i~~----d~~i~~G~SGGPL~-~--~G--~vVGI~s~~~~-~~-~~~~~aip~~~i~~~l~~ 305 (385)
...+.. ....|.|||||||+ . +| .++||++++.. +. ...+...-+....+|+++
T Consensus 210 ~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~ 274 (278)
T 2olg_A 210 SSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFGATCGTEGWPGIYTKVGKYRDWIEG 274 (278)
T ss_dssp TTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEECCBCSTTCBCEEEEEGGGGHHHHHT
T ss_pred CceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEECCCCCCCCCCcEEeEHHHHHHHHHH
Confidence 123333 23579999999999 5 23 69999998643 11 124566677777777654
No 98
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.53 E-value=4.9e-13 Score=123.45 Aligned_cols=168 Identities=17% Similarity=0.166 Sum_probs=105.7
Q ss_pred cceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC---
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD--- 197 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~--- 197 (385)
...|+|.+|++.||||+|||+.+. ..+.|.+.. +.+.+..+-+..++ .+||||||++.+
T Consensus 29 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~ 108 (252)
T 1rtf_B 29 RFLCGGILISSCWILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108 (252)
T ss_dssp EEEEEEEECSSSEEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSC
T ss_pred CEEEEEEEEeCCEEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCcccc
Confidence 357999999999999999999753 456676531 12345554444443 479999999875
Q ss_pred --cccccceeeecCCcc---cCCCeEEEEecCCCCCC--------ceEEEeeEeeccccccc--CCCceeeEEEec----
Q 016641 198 --EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYV--HGATQLMAIQID---- 258 (385)
Q Consensus 198 --~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~--~~~~~~~~i~~d---- 258 (385)
.+.+.+.|+.|.... ..++.+++.||...... ..+...+++...+.... ........+...
T Consensus 109 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 188 (252)
T 1rtf_B 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188 (252)
T ss_dssp CSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC-
T ss_pred ccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCC
Confidence 345678899997643 34889999999753211 12222333332222111 000111123221
Q ss_pred -------ccCCCCCCCccee-e-CC--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHH
Q 016641 259 -------AAINPGNSGGPAI-M-GN--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 259 -------~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l 306 (385)
...|.|||||||+ . +| .++||++++.. + ....+...-+...++|+++.
T Consensus 189 ~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~~C~~~~~p~vyt~V~~y~~WI~~~ 249 (252)
T 1rtf_B 189 GGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGLGCGQKDVPGVYTKVTNYLDWIRDN 249 (252)
T ss_dssp -----CCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHH
T ss_pred CCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcCCCCCCCCCeEEEEHHHHHHHHHHh
Confidence 4579999999999 3 66 69999998653 1 12246677777788887764
No 99
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.53 E-value=1.2e-13 Score=133.20 Aligned_cols=190 Identities=17% Similarity=0.149 Sum_probs=116.1
Q ss_pred EEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCC-------CceEEEEEcCCC-------cEEEEEEEEe
Q 016641 118 KIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVAD-------STFVLVRKHGSP-------TKYRAQVEAV 183 (385)
Q Consensus 118 ~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~-------~~~i~V~~~~~g-------~~~~a~v~~~ 183 (385)
+|..........+||+........|.|.+|++.||||+|||+.+ ...+.|.+.... ..+..+-+..
T Consensus 89 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~ 168 (329)
T 1md8_A 89 RIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSV 168 (329)
T ss_dssp -CBSCCBCCTTSCTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEE
T ss_pred cccCCEECCCCCCCCeEeeccCCCcceEEecCCEEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEE
Confidence 45555555566778876544445799999999999999999973 233455553111 1223333333
Q ss_pred cC----------CCCeEEEEecCC-cccccceeeecCCcc---cCCCeEEEEecCCCCCC-----ceEEEeeEeeccccc
Q 016641 184 GH----------ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-----ISVTKGVVSRVEPTQ 244 (385)
Q Consensus 184 d~----------~~DlAlLkv~~~-~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-----~~~~~G~Vs~~~~~~ 244 (385)
++ .+||||||++.+ .+.+.+.|+.|.+.. ..|..+++.||...... ..+...+++...+..
T Consensus 169 Hp~y~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~ 248 (329)
T 1md8_A 169 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 248 (329)
T ss_dssp CSSCCSSCTTCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHH
T ss_pred CCCcccccCCCCCccEEEEEECCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHH
Confidence 32 359999999876 466679999998654 35889999999754321 122233333222211
Q ss_pred ccC-----CCceeeEEEe-----cccCCCCCCCccee-eCC-----EEEEEEeeecCCCCceEEEEecchHHHHHHHHH
Q 016641 245 YVH-----GATQLMAIQI-----DAAINPGNSGGPAI-MGN-----KVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 245 ~~~-----~~~~~~~i~~-----d~~i~~G~SGGPL~-~~G-----~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
... .......|.. ....|.|||||||+ .++ .++||++++..-..+.+...-+....+|+++..
T Consensus 249 ~~~~~~~~~~~~~~~iCAg~~~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~~C~~~~gvyT~V~~y~~WI~~~i 327 (329)
T 1md8_A 249 WLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEM 327 (329)
T ss_dssp HHHHTTCCCCCCTTEEEESCTTCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECSSSSSSCEEEEEGGGTHHHHHHHH
T ss_pred HhhcccccccCCCCeEeeecCCCCCcCCCCccccceEEEECCCCcEEEEEEEEECCCcCCCCcEEEEHHHHHHHHHHHH
Confidence 100 0001123333 34679999999999 532 599999987541123567777788888887755
No 100
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.53 E-value=1.6e-13 Score=126.94 Aligned_cols=167 Identities=17% Similarity=0.131 Sum_probs=106.0
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCC---------CcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGS---------PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~---------g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
..|+|.+|++.||||+|||+.+...+.|.+... .+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 41 ~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 120 (251)
T 1pyt_D 41 HTCGGTLITPNHVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGDT 120 (251)
T ss_dssp EEEEEEEEETTEEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCSS
T ss_pred eEEEeEEecCCEEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCCC
Confidence 579999999999999999999877777776321 1234444444443 479999999876 45667
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeeccccccc--CCCceeeEEEec----ccCCCCCC
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYV--HGATQLMAIQID----AAINPGNS 266 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~--~~~~~~~~i~~d----~~i~~G~S 266 (385)
+.|+.|.... ..|+.+++.||...... .....-+++...+.... ........+... ...|.|||
T Consensus 121 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GDS 200 (251)
T 1pyt_D 121 IQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGDS 200 (251)
T ss_dssp CCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSCT
T ss_pred eeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCCC
Confidence 8999997543 34889999999753221 11122222222221110 000111233332 35799999
Q ss_pred Cccee-e-CC--EEEEEEeeecC-CC---CceEEEEecchHHHHHHHH
Q 016641 267 GGPAI-M-GN--KVAGVAFQNLS-GA---ENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 267 GGPL~-~-~G--~vVGI~s~~~~-~~---~~~~~aip~~~i~~~l~~l 306 (385)
||||+ . +| .++||++++.. +. ...+....+....+++++.
T Consensus 201 GgPL~~~~~~~~~l~GI~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~ 248 (251)
T 1pyt_D 201 GGPLNCQADGQWDVRGIVSFGSGLSCNTFKKPTVFTRVSAYIDWINQK 248 (251)
T ss_dssp TCEEEEESSSSEEEEEEEEECCSSCTTBTTBCEEEEEGGGGHHHHHHH
T ss_pred CCceEEEECCCEEEEEEEEECCCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 99999 4 56 69999998742 11 2346667777777777764
No 101
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.53 E-value=3.6e-13 Score=124.14 Aligned_cols=169 Identities=14% Similarity=0.116 Sum_probs=107.5
Q ss_pred ceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEec--------CCCCeEEEEecCC---
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVG--------HECDLAILIVESD--- 197 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d--------~~~DlAlLkv~~~--- 197 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..+ ..+||||||++.+
T Consensus 23 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~~~ 102 (248)
T 2r0l_A 23 SFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 102 (248)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSSSC
T ss_pred ceEEEEEEcCCEEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCcccc
Confidence 57999999999999999999754 456776531 1233444433333 2469999999876
Q ss_pred --cccccceeeecCCcc---cCCCeEEEEecCCCCCC-----ceEEE---eeEeecccccc--cCCCceeeEEEe-----
Q 016641 198 --EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-----ISVTK---GVVSRVEPTQY--VHGATQLMAIQI----- 257 (385)
Q Consensus 198 --~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-----~~~~~---G~Vs~~~~~~~--~~~~~~~~~i~~----- 257 (385)
.+.+.+.|+.|.... ..|+.+++.||...... ..... .+++...+... .........+..
T Consensus 103 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 182 (248)
T 2r0l_A 103 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDC 182 (248)
T ss_dssp SSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSS
T ss_pred cccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCCCC
Confidence 455678999998632 35899999999753211 11222 22222222110 000001123333
Q ss_pred cccCCCCCCCccee-e-CC--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 258 DAAINPGNSGGPAI-M-GN--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 258 d~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
....|.|||||||+ . +| .++||++++.. + ....+....+....+++++..+
T Consensus 183 ~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~~~~WI~~~~~ 239 (248)
T 2r0l_A 183 KSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR 239 (248)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHHC
T ss_pred CCcCCCCccCCeEEEEECCcEEEEEEEEeCCCCCCCCCCcEEEEHHHHHHHHHHHhc
Confidence 24679999999999 4 56 59999998653 1 1235677888888888888764
No 102
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.52 E-value=1.6e-13 Score=126.25 Aligned_cols=168 Identities=18% Similarity=0.137 Sum_probs=105.8
Q ss_pred ceEEEEEecCCEEEecccccCC----CceEEEEEcC-----CCcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 140 TTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG-----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~----~~~i~V~~~~-----~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
..|+|.+|++.||||+|||+.+ ...+.|.+.. .++.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 27 ~~CgGtLIs~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 106 (245)
T 2f9n_A 27 HFCGGSLIHPQWVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISSR 106 (245)
T ss_dssp EEEEEEEEETTEEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCSS
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCCC
Confidence 5799999999999999999953 2456666531 12334444444444 469999999876 45667
Q ss_pred ceeeecCCcc---cCCCeEEEEecCCCCCC---------ceEEEeeEeecccccccCC---------CceeeEEEe---c
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQGGDN---------ISVTKGVVSRVEPTQYVHG---------ATQLMAIQI---D 258 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~~~~~---------~~~~~G~Vs~~~~~~~~~~---------~~~~~~i~~---d 258 (385)
+.|+.|.... ..|+.+++.||...... ..+...+++...+...... ......+.. .
T Consensus 107 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~~~ 186 (245)
T 2f9n_A 107 VHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNSQ 186 (245)
T ss_dssp SCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECCSS
T ss_pred ccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecCCC
Confidence 8899997543 35899999999753211 1222233332222111000 001112332 3
Q ss_pred ccCCCCCCCccee--eCC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHH
Q 016641 259 AAINPGNSGGPAI--MGN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 259 ~~i~~G~SGGPL~--~~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~ 307 (385)
...|.|||||||+ .+| .++||++++.. .....+....+....+++++..
T Consensus 187 ~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 241 (245)
T 2f9n_A 187 RDSCQGDSGGPLVCKVNGTWLQAGVVSWGEGCAQPNRPGIYTRVTYYLDWIHHYV 241 (245)
T ss_dssp SBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHHHHHHS
T ss_pred CCcCCCCCCCceEEEECCEEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 4579999999999 467 59999998653 1123466777788888887754
No 103
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.52 E-value=2.1e-13 Score=124.45 Aligned_cols=168 Identities=14% Similarity=0.106 Sum_probs=104.1
Q ss_pred cceEEEEEecCCEEEecccccCCC----ceEEEEEcC---------CCcEEEEEEEEecCC-------CCeEEEEecCC-
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS----TFVLVRKHG---------SPTKYRAQVEAVGHE-------CDLAILIVESD- 197 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~----~~i~V~~~~---------~g~~~~a~v~~~d~~-------~DlAlLkv~~~- 197 (385)
...|+|.+|++.||||+|||+.+. ..+.+.+.. ....+..+-+..+++ +||||||++.+
T Consensus 23 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~ 102 (235)
T 4dgj_A 23 RLLCGASLVSSDWLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFKV 102 (235)
T ss_dssp EEEEEEEECSSSEEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCC
T ss_pred CeEEEEEEeeCCEEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCcc
Confidence 357999999999999999999542 345555421 112333444444543 79999999875
Q ss_pred cccccceeeecCCcc---cCCCeEEEEecCCCCC-------CceEEEeeEeecccccccCC-CceeeEEEe-----cccC
Q 016641 198 EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD-------NISVTKGVVSRVEPTQYVHG-ATQLMAIQI-----DAAI 261 (385)
Q Consensus 198 ~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~-------~~~~~~G~Vs~~~~~~~~~~-~~~~~~i~~-----d~~i 261 (385)
.+.+.+.|+.|.... ..|+.+++.||..... ...+...+++...+...... ......+.. ....
T Consensus 103 ~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~ 182 (235)
T 4dgj_A 103 NYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGIDS 182 (235)
T ss_dssp CCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCCTTEEEECCTTCCCBC
T ss_pred ccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCCCCeEeecCCCCCCcc
Confidence 456678999998644 3589999999964211 11233333333222211111 011123333 2357
Q ss_pred CCCCCCccee-e-CCE--EEEEEeeecCC--CCceEEEEecchHHHHHHHH
Q 016641 262 NPGNSGGPAI-M-GNK--VAGVAFQNLSG--AENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 262 ~~G~SGGPL~-~-~G~--vVGI~s~~~~~--~~~~~~aip~~~i~~~l~~l 306 (385)
|.|||||||+ . +|+ ++||++++..- ....+....+...++++++.
T Consensus 183 C~GDsGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~ 233 (235)
T 4dgj_A 183 CQGDSGGPLMCQENNRWFLAGVTSFGYECALPNRPGVYARVSRFTEWIQSF 233 (235)
T ss_dssp CTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGTHHHHHTT
T ss_pred CCCCCCCeEEEEECCcEEEEEEEEEcCCCCCCCCCEEEeeHHHHHHHHHHH
Confidence 9999999999 4 554 99999987541 12346667777777777653
No 104
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.51 E-value=1.8e-13 Score=132.73 Aligned_cols=191 Identities=16% Similarity=0.154 Sum_probs=119.0
Q ss_pred EEEEeeecCCCCCCCCCCCC--CCcceEEEEEecCCEEEecccccCCCc-----------eEEEEEcCCCcEEEEEEEEe
Q 016641 117 VKIFTVSSSPNYGLPWQNKS--QRETTGSGFVIPGKKILTNAHVVADST-----------FVLVRKHGSPTKYRAQVEAV 183 (385)
Q Consensus 117 V~I~~~~~~~~~~~p~~~~~--~~~~~GSGfiI~~g~ILT~aHvv~~~~-----------~i~V~~~~~g~~~~a~v~~~ 183 (385)
-||..........+||+... .....|.|.+|++.||||+|||+.... ...+... ..+.+..+-+..
T Consensus 101 ~RIvGG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~i~~ 179 (347)
T 4f4o_C 101 QRIMGGSLDAKGSFPWQAKMISHHNLTSGATLINEQWLLTTAKNLRLGHKNDTKAKDIAPTLRLYVG-KKQEVEIEKVIF 179 (347)
T ss_dssp --CCSCCBCCSCCCTTCEEEECTTCCEEECCBCSSSEEEECHHHHTTTSCTTCCHHHHGGGCEEEET-TTEEECEEEEEE
T ss_pred CeEECCEECCCCCCCcEEEEEeCCCEEEEEEEEcCCEEEeCcccccCCCCCcceEEeeeeeeeecCC-CeEEEEEEEEEE
Confidence 35666666667778887532 234579999999999999999996321 2233332 445566655556
Q ss_pred cC---CCCeEEEEecCC-cccccceeeecCCcc--cCCCeEEEEecCCCCCC------ceEEEeeEeecccccccCC---
Q 016641 184 GH---ECDLAILIVESD-EFWEGMHFLELGDIP--FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPTQYVHG--- 248 (385)
Q Consensus 184 d~---~~DlAlLkv~~~-~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~~~~~~--- 248 (385)
++ .+||||||++.+ .+++.+.|+.|.... ..|..+++.||...... ..+...+++...+......
T Consensus 180 HP~y~~nDIALlkL~~~v~~~~~v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~ 259 (347)
T 4f4o_C 180 HPDNSTVDIGLIKLKQKVPVNERVMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTV 259 (347)
T ss_dssp CSCTTTCCCEEEEESSCCCCSSSCCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSS
T ss_pred CcCCCCCCEEEEEECCCccCCCceeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccc
Confidence 65 479999999876 567789999997544 45899999999753221 2334444443222111000
Q ss_pred --------------CceeeEEEe-----cccCCCCCCCccee-eC---C--EEEEEEeeecC-CCCceEEEEecchHHHH
Q 016641 249 --------------ATQLMAIQI-----DAAINPGNSGGPAI-MG---N--KVAGVAFQNLS-GAENIGYIIPVPVIKHF 302 (385)
Q Consensus 249 --------------~~~~~~i~~-----d~~i~~G~SGGPL~-~~---G--~vVGI~s~~~~-~~~~~~~aip~~~i~~~ 302 (385)
......+.. ....|.|||||||+ .+ | .++||+|++.. +....+...-+....+|
T Consensus 260 ~~~~~~~~~~~~~~~~~~~~iCAG~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~~C~~~~pgVYTrVs~y~~W 339 (347)
T 4f4o_C 260 PEKKTPKSPVGVQPILNEHTFCAGLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDKSCRTAEYGVYVRVTSILDW 339 (347)
T ss_dssp GGGCCCCCSSSSCCCCSTTEEEECCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECCCTTTSSCEEEEEHHHHHHH
T ss_pred cccccccccccccccccCCeEEecCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCCCCCCCCCeEEEEHHHHHHH
Confidence 000112332 23568999999998 32 3 39999998654 22234666666777777
Q ss_pred HHHHHH
Q 016641 303 ITGVVE 308 (385)
Q Consensus 303 l~~l~~ 308 (385)
+++...
T Consensus 340 I~~~i~ 345 (347)
T 4f4o_C 340 IQTTIA 345 (347)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 776553
No 105
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.51 E-value=7e-13 Score=125.44 Aligned_cols=168 Identities=14% Similarity=0.087 Sum_probs=105.6
Q ss_pred ceEEEEEecCCEEEecccccCCC---ceEEEEEcC-------------CCcEEEEEEEEecC-------CCCeEEEEecC
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG-------------SPTKYRAQVEAVGH-------ECDLAILIVES 196 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~-------------~g~~~~a~v~~~d~-------~~DlAlLkv~~ 196 (385)
..|.|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+||||||++.
T Consensus 30 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~~ 109 (290)
T 1fiw_A 30 HVCGGSLLNSQWLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKITP 109 (290)
T ss_dssp EEEEEEEEETTEEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEEES
T ss_pred eEEEEEEeeCCEEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEECC
Confidence 57999999999999999999753 345565421 11233444344443 47999999987
Q ss_pred C-cccccceeeecCCcc----cCCCeEEEEecCCCCC--------CceEEEeeEeecccccc--cCCCceeeEEEe----
Q 016641 197 D-EFWEGMHFLELGDIP----FLQQAVAVVGYPQGGD--------NISVTKGVVSRVEPTQY--VHGATQLMAIQI---- 257 (385)
Q Consensus 197 ~-~~~~~~~~l~l~~~~----~~G~~V~~iG~p~~~~--------~~~~~~G~Vs~~~~~~~--~~~~~~~~~i~~---- 257 (385)
+ .+.+.+.|+.|.... ..|+.+++.||..... ...+...+++...+... .........+..
T Consensus 110 ~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~~ 189 (290)
T 1fiw_A 110 PVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYPE 189 (290)
T ss_dssp CCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTT
T ss_pred ccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCCEEEEecCC
Confidence 6 466678999997532 3489999999975321 11233334433222211 011111122333
Q ss_pred -cccCCCCCCCccee-eC---C--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHH
Q 016641 258 -DAAINPGNSGGPAI-MG---N--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 258 -d~~i~~G~SGGPL~-~~---G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~ 307 (385)
....|.|||||||+ .+ | .++||++++.. .....+...-+....+++++..
T Consensus 190 ~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 248 (290)
T 1fiw_A 190 GKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGVGCARAKRPGVYTSTWSYLNWIASKI 248 (290)
T ss_dssp CSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECSSSSBTTBCEEEEESGGGHHHHHHHH
T ss_pred CCCeeCCCCCchheEEEECCCCCEEEEEEEEECCCCCCCCCCeEEEEHHHhHHHHHHHh
Confidence 23679999999999 54 2 69999998643 1123466777788888888765
No 106
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.51 E-value=5.3e-13 Score=125.68 Aligned_cols=169 Identities=14% Similarity=0.115 Sum_probs=106.4
Q ss_pred ceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEecC--------CCCeEEEEecCC---
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH--------ECDLAILIVESD--- 197 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d~--------~~DlAlLkv~~~--- 197 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. ..+.+..+-+..++ .+||||||++.+
T Consensus 58 ~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~~~ 137 (283)
T 1yc0_A 58 SFCAGSLVHTCWVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGDR 137 (283)
T ss_dssp EEEEEEEEETTEEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBTTB
T ss_pred cEEEEEEeeCCEEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCccc
Confidence 57999999999999999999764 456776531 12334444333332 469999999875
Q ss_pred --cccccceeeecCCcc---cCCCeEEEEecCCCCCC-----ceEEE---eeEeecccccc--cCCCceeeEEEe-----
Q 016641 198 --EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-----ISVTK---GVVSRVEPTQY--VHGATQLMAIQI----- 257 (385)
Q Consensus 198 --~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-----~~~~~---G~Vs~~~~~~~--~~~~~~~~~i~~----- 257 (385)
.+.+.+.|+.|.... ..|+.+++.||...... ..... .+++...+... .........+..
T Consensus 138 ~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~~~ 217 (283)
T 1yc0_A 138 CATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFDC 217 (283)
T ss_dssp SSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSSS
T ss_pred cccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCCCC
Confidence 455678999998632 35899999999753211 12222 22332222110 000001123333
Q ss_pred cccCCCCCCCccee-e-CC--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 258 DAAINPGNSGGPAI-M-GN--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 258 d~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
....|.|||||||+ . +| .++||++++.. + ....+....+....+|+++..+
T Consensus 218 ~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~~C~~~~~p~vyt~V~~y~~WI~~~i~ 274 (283)
T 1yc0_A 218 KSDACQGDSGGPLACEKNGVAYLYGIISWGDGCGRLHKPGVYTRVANYVDWINDRIR 274 (283)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECSTTTCTTCCEEEEEGGGGHHHHHHHCC
T ss_pred CCccCCCCCCCceEEEECCcEEEEEEEEECCCCCCCCCCeEEEEhhhHHHHHHHHhc
Confidence 24579999999999 4 56 59999998653 1 1235677778888888877653
No 107
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.50 E-value=8.2e-13 Score=129.36 Aligned_cols=170 Identities=15% Similarity=0.124 Sum_probs=107.9
Q ss_pred cceEEEEEecCCEEEecccccCC----CceEEEEEcC------CCcEEEEEEEEecC-------------CCCeEEEEec
Q 016641 139 ETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG------SPTKYRAQVEAVGH-------------ECDLAILIVE 195 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~----~~~i~V~~~~------~g~~~~a~v~~~d~-------------~~DlAlLkv~ 195 (385)
...|.|.+|++.||||+|||+.+ ...+.|.+.. .+..+..+-+..++ .+||||||++
T Consensus 140 ~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL~ 219 (372)
T 1z8g_A 140 AHLCGGSLLSGDWVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHLS 219 (372)
T ss_dssp EEEEEEEESSSSEEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEES
T ss_pred ceEEEEEEecCCEEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEEC
Confidence 35799999999999999999952 2456666531 12344444443333 3599999998
Q ss_pred CC-cccccceeeecCCcc---cCCCeEEEEecCCCCC-------CceEEEeeEeecccccc--cCCCceeeEEEe-----
Q 016641 196 SD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD-------NISVTKGVVSRVEPTQY--VHGATQLMAIQI----- 257 (385)
Q Consensus 196 ~~-~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~-------~~~~~~G~Vs~~~~~~~--~~~~~~~~~i~~----- 257 (385)
.+ .+.+.+.|+.|+... ..|+.+++.||..... ...+...+++...+... .........+..
T Consensus 220 ~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~~ 299 (372)
T 1z8g_A 220 SPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPEG 299 (372)
T ss_dssp SCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTTC
T ss_pred CCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCCC
Confidence 76 456678999998643 3489999999975321 11233334443322211 111111123433
Q ss_pred cccCCCCCCCccee-eC-----C--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 258 DAAINPGNSGGPAI-MG-----N--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 258 d~~i~~G~SGGPL~-~~-----G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
....|.|||||||+ .+ | .++||++++.. .....+....+....+++++..+
T Consensus 300 ~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~~C~~~~~p~vyt~V~~y~~WI~~~i~ 360 (372)
T 1z8g_A 300 GIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGTGCALAQKPGVYTKVSDFREWIFQAIK 360 (372)
T ss_dssp SCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBSSSSCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHh
Confidence 23579999999999 54 3 69999998753 11235677788888888887654
No 108
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.50 E-value=2.4e-12 Score=118.18 Aligned_cols=169 Identities=14% Similarity=0.173 Sum_probs=105.4
Q ss_pred cceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEecC---------CCCeEEEEecCC-
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH---------ECDLAILIVESD- 197 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d~---------~~DlAlLkv~~~- 197 (385)
...|+|.+|++.||||+|||+.+. ..+.|.+.. +.+.+..+-+..++ .+||||||++.+
T Consensus 28 ~~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 28 TYVCGGSLISPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred ceEEEEEEEeCCEEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 357999999999999999999653 345665531 12345554444443 369999999865
Q ss_pred ----cccccceeeecCCcc---cCCCeEEEEecCCCCCC--------ceEEEeeEeeccccccc--CCCceeeEEEe---
Q 016641 198 ----EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQYV--HGATQLMAIQI--- 257 (385)
Q Consensus 198 ----~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~~--~~~~~~~~i~~--- 257 (385)
.+.+.+.|+.|.... ..|+.+++.||...... ......+++...+.... ........+..
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 345678899887532 45899999999753221 12222333322222110 00001112322
Q ss_pred --cccCCCCCCCccee--eCC--EEEEEEeeecCC--CCceEEEEecchHHHHHHHHH
Q 016641 258 --DAAINPGNSGGPAI--MGN--KVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 258 --d~~i~~G~SGGPL~--~~G--~vVGI~s~~~~~--~~~~~~aip~~~i~~~l~~l~ 307 (385)
....|.|||||||+ .+| .++||+++...- ....+....+...++++++..
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~~c~~~~~p~vyt~V~~~~~WI~~~~ 245 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 245 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGCHHHHHHHT
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 24679999999999 455 499999986431 123467777888888887654
No 109
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.48 E-value=4.4e-12 Score=118.66 Aligned_cols=168 Identities=14% Similarity=0.171 Sum_probs=105.4
Q ss_pred ceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEecC---------CCCeEEEEecCC--
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH---------ECDLAILIVESD-- 197 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d~---------~~DlAlLkv~~~-- 197 (385)
..|+|.+|++.||||+|||+.+. ..+.|.+.. .++.+..+-+..++ .+||||||++.+
T Consensus 52 ~~CgGtLI~~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~~ 131 (276)
T 2jde_A 52 YVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKEG 131 (276)
T ss_dssp EEEEEEEEETTEEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTTS
T ss_pred eeeeeEEeeCCEEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCccc
Confidence 47999999999999999999653 345665531 12345554444443 359999999865
Q ss_pred ---cccccceeeecCCcc---cCCCeEEEEecCCCCCC--------ceEEEeeEeecccccc--cCCCceeeEEEe----
Q 016641 198 ---EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN--------ISVTKGVVSRVEPTQY--VHGATQLMAIQI---- 257 (385)
Q Consensus 198 ---~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~--------~~~~~G~Vs~~~~~~~--~~~~~~~~~i~~---- 257 (385)
.+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+... .........+..
T Consensus 132 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 211 (276)
T 2jde_A 132 RCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADPQ 211 (276)
T ss_dssp CCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECTT
T ss_pred cccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCCC
Confidence 355678899997532 45899999999753221 1222333333222211 000001112332
Q ss_pred -cccCCCCCCCccee--eCC--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHH
Q 016641 258 -DAAINPGNSGGPAI--MGN--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 258 -d~~i~~G~SGGPL~--~~G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~ 307 (385)
....|.|||||||+ .+| .++||++++.. . ....+....+....+|+++..
T Consensus 212 ~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~~C~~~~~p~vyt~V~~y~~WI~~~~ 268 (276)
T 2jde_A 212 WKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPWIRSHT 268 (276)
T ss_dssp SCCBCCTTCTTCEEEEEETTEEEEEEEEEECSSSSCTTCCEEEEEGGGGHHHHHHTC
T ss_pred CCCcccccccCcceEEEeCCcEEEEEEEEECCCCCCCCCCeEEEEHHHHHHHHHHHh
Confidence 24679999999999 455 49999998744 1 123567777888888887654
No 110
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.48 E-value=5.1e-13 Score=131.82 Aligned_cols=190 Identities=18% Similarity=0.153 Sum_probs=116.8
Q ss_pred EEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCC-------ceEEEEEcCC-------CcEEEEEEEEe
Q 016641 118 KIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS-------TFVLVRKHGS-------PTKYRAQVEAV 183 (385)
Q Consensus 118 ~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~-------~~i~V~~~~~-------g~~~~a~v~~~ 183 (385)
+|..........+||+........|.|.+|++.||||||||+.+. ..+.|.+... ...+..+-+..
T Consensus 157 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~ 236 (399)
T 1gpz_A 157 QIIGGQKAKMGNFPWQVFTNIHGRGGGALLGDRWILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSV 236 (399)
T ss_dssp CCCSCEECCTTSSTTEEEEESSSEEEEEEETTTEEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEE
T ss_pred EEECCEECCCCCCCCEEEECCCCCeEEEEeCCCEEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEE
Confidence 455555666677888765444457999999999999999999743 2345655311 11233333333
Q ss_pred cC----------CCCeEEEEecCC-cccccceeeecCCcc---cCCCeEEEEecCCCCC-----CceEEEeeEeeccccc
Q 016641 184 GH----------ECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD-----NISVTKGVVSRVEPTQ 244 (385)
Q Consensus 184 d~----------~~DlAlLkv~~~-~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~-----~~~~~~G~Vs~~~~~~ 244 (385)
++ .+||||||++.+ .+.+.+.|+.|.... ..|..+++.||..... ...+...+++...+..
T Consensus 237 Hp~y~~~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~ 316 (399)
T 1gpz_A 237 HPDYRQDESYNFEGDIALLELENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACEN 316 (399)
T ss_dssp CSSCCSSSSSCCTTCCEEEEESSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC
T ss_pred CCCCCcCCCCCCCCcEEEEEECCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhh
Confidence 32 359999999876 566789999998654 3588999999975321 1223333443322211
Q ss_pred ccCC-----CceeeEEEe-----cccCCCCCCCccee-eC---C--EEEEEEeeecCCCCceEEEEecchHHHHHHHHH
Q 016641 245 YVHG-----ATQLMAIQI-----DAAINPGNSGGPAI-MG---N--KVAGVAFQNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 245 ~~~~-----~~~~~~i~~-----d~~i~~G~SGGPL~-~~---G--~vVGI~s~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
.... .....+|.. ....|.|||||||+ .+ + .++||++++..-..+.+....+....+|+++..
T Consensus 317 ~~~~~~~~~~~~~~~~Cag~~~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~~C~~~~~vyt~V~~y~~WI~~~~ 395 (399)
T 1gpz_A 317 WLRGKNRMDVFSQNMFCAGHPSLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGIGCSRGYGFYTKVLNYVDWIKKEM 395 (399)
T ss_dssp -----------CCSEEEEECGGGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCTTTTTTEEEEEEGGGGHHHHHHHT
T ss_pred hhhcccccCcCCCCeEecccCCCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCCCcCCCCeEEEEhHHhHHHHHHHh
Confidence 1100 001122332 24679999999999 43 3 599999987542224577777777888887654
No 111
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.48 E-value=6.7e-13 Score=120.43 Aligned_cols=174 Identities=15% Similarity=0.142 Sum_probs=100.0
Q ss_pred CCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec---CCEEEecccccCCC------ceEEEEEcCC-----CcEEEE
Q 016641 113 LDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP---GKKILTNAHVVADS------TFVLVRKHGS-----PTKYRA 178 (385)
Q Consensus 113 ~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~---~g~ILT~aHvv~~~------~~i~V~~~~~-----g~~~~a 178 (385)
.+.+++|.... ......|+|.+|+ +.||||||||+.+. ..+.+..... ...+..
T Consensus 6 ~p~~g~l~~~~------------~~~~~~CgGslI~s~s~~~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v 73 (218)
T 3cp7_A 6 SPHIGKVFFST------------NQGDFVCSANIVASANQSTVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAA 73 (218)
T ss_dssp CTTEEEEEEEE------------TTEEEEEEEEEBCCTTSCEEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEE
T ss_pred CceEEEEEEEc------------CCCCeEEEEEEEecCCCCEEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEE
Confidence 46778876532 1123579999999 99999999999653 3455554211 113444
Q ss_pred EEEEec--------CCCCeEEEEecCC---cccccce-eeecCCcccCCCeEEEEecCCCCC-C---ceEEEeeEeeccc
Q 016641 179 QVEAVG--------HECDLAILIVESD---EFWEGMH-FLELGDIPFLQQAVAVVGYPQGGD-N---ISVTKGVVSRVEP 242 (385)
Q Consensus 179 ~v~~~d--------~~~DlAlLkv~~~---~~~~~~~-~l~l~~~~~~G~~V~~iG~p~~~~-~---~~~~~G~Vs~~~~ 242 (385)
+-+..+ ..+||||||++.+ .+.+.+. ++.|......|+.+.+.||+.... . +........ .
T Consensus 74 ~~~~~hp~y~~~~~~~~DiAll~L~~~~~~~~~~~v~~~~~l~~~~~~g~~~~v~GwG~~~~~~~~~l~~C~~~~~---~ 150 (218)
T 3cp7_A 74 EELVTSAEWANRGDFEHDYAFAVLETKGGTTVQQQVGTASPIAFNQPRGQYYSAYGYPAAAPFNGQELHSCHGTAT---N 150 (218)
T ss_dssp EEEEECHHHHHHCCGGGCCEEEEECCBTTBCHHHHHSCCBCBCCSCCSSCEEEEEECCCSTTCCSSSCEEEEEECE---E
T ss_pred EEEEECcccccCCCCcCCEEEEEEeCCCCcChhHhcCcccceeecCCCCCEEEEEeCCCCCCCCCceeeEeeeeEE---c
Confidence 333332 3579999999876 3434455 667764445689999999996431 0 111111000 0
Q ss_pred ccccCCCceeeEEEecccCCCCCCCcceeeC----CEEEEEEeeecCCCCceEEEEe-cchHHHHHHHH
Q 016641 243 TQYVHGATQLMAIQIDAAINPGNSGGPAIMG----NKVAGVAFQNLSGAENIGYIIP-VPVIKHFITGV 306 (385)
Q Consensus 243 ~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~----G~vVGI~s~~~~~~~~~~~aip-~~~i~~~l~~l 306 (385)
. . .......+ .+..+.|||||||+.+ ++++||+|++..-.....+... -+.++.++++.
T Consensus 151 ~-~-~~~~~~~~---~Ca~~~GDSGGPlv~~~~g~~~lvGIvS~G~gc~~~~~~~p~~~~~~~~l~~~a 214 (218)
T 3cp7_A 151 D-P-MGSSTQGI---PCNMTGGSSGGPWFLGNGTGGAQNSTNSYGYTFLPNVMFGPYFGSGAQQNYNYA 214 (218)
T ss_dssp C-T-TSSSCEEE---ECCCCTTCTTCEEEESSSSSSCEEEECCEEETTEEEEEEECCCCHHHHHHHHHH
T ss_pred C-C-CCCceEEe---cCCCCCCCcCCeeEEccCCCeEEEEEEccccCCCCCcEEcCcCCHHHHHHHHHH
Confidence 0 0 00111112 2334689999999943 7899999997542222333322 24566666554
No 112
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.47 E-value=7.3e-13 Score=130.97 Aligned_cols=190 Identities=17% Similarity=0.189 Sum_probs=118.5
Q ss_pred EEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCC----CceEEEEEcC------CCcEEEEEEEEecC--
Q 016641 118 KIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVAD----STFVLVRKHG------SPTKYRAQVEAVGH-- 185 (385)
Q Consensus 118 ~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~----~~~i~V~~~~------~g~~~~a~v~~~d~-- 185 (385)
+|..........+||+........|.|.+|++.||||+|||+.+ ...+.|++.. +.+.+..+-+..++
T Consensus 161 rIvgG~~a~~~~~Pw~v~l~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y 240 (403)
T 1zjk_A 161 QIYGGQKAKPGDFPWQVLILGGTTAAGALLYDNWVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGY 240 (403)
T ss_dssp CCSSCEECCTTSSTTEEEEEESCCEEEEEETTTEEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTC
T ss_pred cccCCcCCCCCCcCCEeEeccCCceEEEEecCCEEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCC
Confidence 34444444555667765443335799999999999999999964 3556676532 12334444444432
Q ss_pred ------CCCeEEEEecCC-cccccceeeecCCcc-----cCCCeEEEEecCCCCC------CceEEEeeEeecccccccC
Q 016641 186 ------ECDLAILIVESD-EFWEGMHFLELGDIP-----FLQQAVAVVGYPQGGD------NISVTKGVVSRVEPTQYVH 247 (385)
Q Consensus 186 ------~~DlAlLkv~~~-~~~~~~~~l~l~~~~-----~~G~~V~~iG~p~~~~------~~~~~~G~Vs~~~~~~~~~ 247 (385)
.+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||..... ...+...+++...+.....
T Consensus 241 ~~~~~~~~DIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~ 320 (403)
T 1zjk_A 241 THDAGFDNDIALIKLNNKVVINSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYE 320 (403)
T ss_dssp CTTSCCTTCCEEEEESSCCCCBTTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTT
T ss_pred CCCCCCcccEEEEEeCCcCcCCCceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhh
Confidence 479999999876 566789999998643 3489999999975422 1123333443322211110
Q ss_pred C------CceeeEEEe-----cccCCCCCCCccee-eC---C--EEEEEEeeec-C-C-CCceEEEEecchHHHHHHHHH
Q 016641 248 G------ATQLMAIQI-----DAAINPGNSGGPAI-MG---N--KVAGVAFQNL-S-G-AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 248 ~------~~~~~~i~~-----d~~i~~G~SGGPL~-~~---G--~vVGI~s~~~-~-~-~~~~~~aip~~~i~~~l~~l~ 307 (385)
. ......|.. ....|.|||||||+ .+ | .++||++++. . + ....+....+....+++++..
T Consensus 321 ~~~~~~~~i~~~~~Cag~~~~~~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g~~~C~~~~~p~vyt~V~~y~~WI~~~i 400 (403)
T 1zjk_A 321 KPPYPRGSVTANMLCAGLESGGKDSCRGDSGGALVFLDSETERWFVGGIVSWGSMNCGEAGQYGVYTKVINYIPWIENII 400 (403)
T ss_dssp SSSCCSSCSCTTEEEECCSSCCTTSCSCSTTCEEEEEETTTTEEEEEEEEEEECSCC--CCCCEEEEEGGGGHHHHHHHH
T ss_pred ccccccCcCCCCeEeeccCCCCCCCCcCCCCccEEEEECCCCcEEEEEEEEECCCCCCCCCCCeEEEEHHHHHHHHHHHH
Confidence 0 011123333 34679999999999 53 3 5999999873 2 1 123567778888888887765
No 113
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.47 E-value=3.9e-13 Score=123.33 Aligned_cols=169 Identities=16% Similarity=0.139 Sum_probs=105.0
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcC-CCc---------EEEEEEEEecC-------C--CCeEEEEecCC-cc
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-SPT---------KYRAQVEAVGH-------E--CDLAILIVESD-EF 199 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~-~g~---------~~~a~v~~~d~-------~--~DlAlLkv~~~-~~ 199 (385)
..|+|.+|++.||||+|||+.+...+.|.+.. +-. .+..+-+..++ . +||||||++.+ .+
T Consensus 26 ~~CgGtLIs~~~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (240)
T 1fon_A 26 HTCGGSLIAPDWVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQL 105 (240)
T ss_dssp EEECCEEEETTEEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCCC
T ss_pred eEEEEEEeeCCEEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCcccc
Confidence 57999999999999999999876666665421 111 11111122232 3 89999999876 45
Q ss_pred cccceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeeccccccc-CC-CceeeEEEec---ccCCCC
Q 016641 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQYV-HG-ATQLMAIQID---AAINPG 264 (385)
Q Consensus 200 ~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~~~-~~-~~~~~~i~~d---~~i~~G 264 (385)
.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+.... .+ ......+... ...|.|
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~G 185 (240)
T 1fon_A 106 GDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCNG 185 (240)
T ss_dssp TTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTTS
T ss_pred CCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccCC
Confidence 5678899997643 35889999999753211 12222333332222110 00 0011123322 467999
Q ss_pred CCCccee-e--CC--EEEEEEeeecC-C---CCceEEEEecchHHHHHHHHHH
Q 016641 265 NSGGPAI-M--GN--KVAGVAFQNLS-G---AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 265 ~SGGPL~-~--~G--~vVGI~s~~~~-~---~~~~~~aip~~~i~~~l~~l~~ 308 (385)
||||||+ . +| .++||+++... + ....+....+....+++++..+
T Consensus 186 DsGgPL~~~~~~~~~~l~Gi~S~g~~~~C~~~~~p~vyt~V~~~~~WI~~~~~ 238 (240)
T 1fon_A 186 DSGGPLNCPAADGSWQVHGVTSFVSAFGCNTIKKPTVFTRVSAFIDWIDETIA 238 (240)
T ss_dssp CTTCEEEEECSSSCEEEEEEEEECCTTCSSBTTBCEEEEEGGGSHHHHHHHHH
T ss_pred CCCCeEEeEcCCCCEEEEEEEEEcCCCCCCCCCCCcEEEEhHHHHHHHHHHHh
Confidence 9999999 4 67 89999998642 1 1235677788888888877653
No 114
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.46 E-value=1.3e-12 Score=123.11 Aligned_cols=185 Identities=15% Similarity=0.065 Sum_probs=116.3
Q ss_pred HHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcC-----CCcEEEEEEEEec
Q 016641 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----SPTKYRAQVEAVG 184 (385)
Q Consensus 110 ~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~-----~g~~~~a~v~~~d 184 (385)
..-.|.+|.|... .....|+|.+|++.||||+|||+.+...+.|.+.. ..+.+..+-+..+
T Consensus 61 ~~~~Pw~v~l~~~--------------~~~~~CgGtLI~~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~H 126 (283)
T 3f1s_B 61 LQDLPWQVKLTNS--------------EGKDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVH 126 (283)
T ss_dssp --CCTTEEEEECT--------------TSCEEEEEEEEETTEEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEEC
T ss_pred ccccCCEEEEEec--------------CCCeeeccEEecCCEEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEEC
Confidence 3446777777631 12357999999999999999999877777777642 2344555545554
Q ss_pred C-------CCCeEEEEecCC-cccccceeeecCCcc------cCCCeEEEEecCCCCC-----CceEEEeeEeecccccc
Q 016641 185 H-------ECDLAILIVESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQGGD-----NISVTKGVVSRVEPTQY 245 (385)
Q Consensus 185 ~-------~~DlAlLkv~~~-~~~~~~~~l~l~~~~------~~G~~V~~iG~p~~~~-----~~~~~~G~Vs~~~~~~~ 245 (385)
+ .+||||||++.+ .+.+.+.|+.|+... ..|+.+++.||..... ...+...+++...+...
T Consensus 127 p~y~~~~~~nDIALl~L~~pv~~~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~ 206 (283)
T 3f1s_B 127 MRYDADAGENDLSLLELEWPIQCPGAGLPVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQV 206 (283)
T ss_dssp TTCBTTTTBTCCEEEEESSCCCTTTTCCCCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHH
T ss_pred CCCCCCCCCCCEEEEEeCCcccCCCCEEeEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhh
Confidence 4 469999999876 456788999998643 3489999999975211 12233333433222111
Q ss_pred cCCCceeeEEEe--cccCCCCCCCccee-e-CCE--EEEEEeeecCC-CCceEEEEecchHHHHHHHHHH
Q 016641 246 VHGATQLMAIQI--DAAINPGNSGGPAI-M-GNK--VAGVAFQNLSG-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 246 ~~~~~~~~~i~~--d~~i~~G~SGGPL~-~-~G~--vVGI~s~~~~~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
........++.. ....+.|||||||+ . +|+ ++||+++.... ....+...-+....+|+++..+
T Consensus 207 ~~~~~~~~~~Ca~~~~~~~~gDSGgPlv~~~~~~~~l~GIvS~g~c~~~~~p~vyt~V~~y~~WI~~~~~ 276 (283)
T 3f1s_B 207 LNVTVTTRTYCERSSVAAMHWMDGSVVTREHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIMN 276 (283)
T ss_dssp HTSCCCTTEEEEECSSCGGGBCTTCEEEEECSSCEEEEEEECCCSGGGCSSEEEEEEGGGGHHHHHHHHT
T ss_pred hcCCCCCCeEcccCCCCCCCCCCCCcEEEEECCEEEEEEEEEeCCCCCCCcceEEEEhHHhHHHHHHHhh
Confidence 111011112222 22345789999999 4 565 99999874221 2234577888888888888764
No 115
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.45 E-value=1e-12 Score=126.70 Aligned_cols=188 Identities=15% Similarity=0.112 Sum_probs=112.3
Q ss_pred EEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcC------CCcEEEE---EEEEec-----
Q 016641 119 IFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG------SPTKYRA---QVEAVG----- 184 (385)
Q Consensus 119 I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~------~g~~~~a---~v~~~d----- 184 (385)
|..........+||+.... ...|.|.+|++.||||+|||+.+.....|.+.. +...+.. +-+..+
T Consensus 83 IvgG~~a~~~~~Pw~v~l~-~~~CgGsLIs~~~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~ 161 (333)
T 1elv_A 83 IIGGSDADIKNFPWQVFFD-NPWAGGALINEYWVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKL 161 (333)
T ss_dssp CBTCEECCGGGSTTEEEEE-TTEEEEEEEETTEEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCC
T ss_pred eecCcccCCCCcCeEEEec-CCceeEEEecCCEEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcc
Confidence 4444444445567765432 237999999999999999999865443444321 1112222 222222
Q ss_pred ---------CCCCeEEEEecCC-cccccceeeecCCcc-----cCCCeEEEEecCCCCCC------ceEEEeeEeecccc
Q 016641 185 ---------HECDLAILIVESD-EFWEGMHFLELGDIP-----FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPT 243 (385)
Q Consensus 185 ---------~~~DlAlLkv~~~-~~~~~~~~l~l~~~~-----~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~ 243 (385)
..+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+.
T Consensus 162 ~~~~~~~~~~~nDIALl~L~~~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~ 241 (333)
T 1elv_A 162 LAVPEGRTNFDNDIALVRLKDPVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCK 241 (333)
T ss_dssp CSSCTTCCCCTTCCEEEEESSCCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHH
T ss_pred cccccccCCCcceEEEEEeCCCCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhh
Confidence 2479999999876 466678999998543 23899999999753221 12233333322221
Q ss_pred cccCC---------CceeeEEEe----cccCCCCCCCccee-eC---C---EEEEEEeeecCCCCceEEEEecchHHHHH
Q 016641 244 QYVHG---------ATQLMAIQI----DAAINPGNSGGPAI-MG---N---KVAGVAFQNLSGAENIGYIIPVPVIKHFI 303 (385)
Q Consensus 244 ~~~~~---------~~~~~~i~~----d~~i~~G~SGGPL~-~~---G---~vVGI~s~~~~~~~~~~~aip~~~i~~~l 303 (385)
..... .....+|.. ....|.|||||||+ .+ | .++||++++.. ....+....+....+|+
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~~Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~~-C~~~~vyt~V~~y~~WI 320 (333)
T 1elv_A 242 EVKVEKPTADAEAYVFTPNMICAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGPQ-CGTYGLYTRVKNYVDWI 320 (333)
T ss_dssp TC----------CCCCCTTEEEEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECSS-TTSEEEEEEGGGGHHHH
T ss_pred hhhhcccccccccccCCCCeECccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCCC-CCCCcEEeEHHHHHHHH
Confidence 11000 001112332 24579999999999 53 3 49999998743 22257778888888888
Q ss_pred HHHHH
Q 016641 304 TGVVE 308 (385)
Q Consensus 304 ~~l~~ 308 (385)
++..+
T Consensus 321 ~~~~~ 325 (333)
T 1elv_A 321 MKTMQ 325 (333)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 87664
No 116
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=99.44 E-value=5.1e-13 Score=133.05 Aligned_cols=191 Identities=20% Similarity=0.176 Sum_probs=117.5
Q ss_pred EEEeeecCCCCCCCCCCCCC----CcceEEEEEecCCEEEecccccC--------CCceEEEEEcCC---------CcEE
Q 016641 118 KIFTVSSSPNYGLPWQNKSQ----RETTGSGFVIPGKKILTNAHVVA--------DSTFVLVRKHGS---------PTKY 176 (385)
Q Consensus 118 ~I~~~~~~~~~~~p~~~~~~----~~~~GSGfiI~~g~ILT~aHvv~--------~~~~i~V~~~~~---------g~~~ 176 (385)
+|..........+||+.... ....|.|.||++.||||+|||+. ....+.|++... .+.+
T Consensus 165 RIvgG~~a~~g~~Pw~v~l~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~ 244 (424)
T 3nxp_A 165 RIVEGSDAEIGMSPWQVMLFRKSPQELLCGASLISDRWVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKIS 244 (424)
T ss_dssp CCCCCEECCTTSCTTEEEEEETTTTEEEEEEEESSSSEEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEE
T ss_pred eeECCEECCCCCCCCEEEEeecCCCCccceeEEEcCCEEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEE
Confidence 55565556666778865331 23579999999999999999984 234566665311 1223
Q ss_pred EEEEEEecC--------CCCeEEEEecCC-cccccceeeecCCcc------cCCCeEEEEecCCC----------C-C--
Q 016641 177 RAQVEAVGH--------ECDLAILIVESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQG----------G-D-- 228 (385)
Q Consensus 177 ~a~v~~~d~--------~~DlAlLkv~~~-~~~~~~~~l~l~~~~------~~G~~V~~iG~p~~----------~-~-- 228 (385)
..+-+..++ .+||||||++.+ .+.+.+.|+.|.... ..|..+.+.||... . .
T Consensus 245 ~V~~ii~Hp~y~~~~~~~nDIALLkL~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~ 324 (424)
T 3nxp_A 245 MLEKIYIHPRYNWRENLDRDIALMKLKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSV 324 (424)
T ss_dssp CEEEEEECTTCBTTTTSBTCCEEEEESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSB
T ss_pred EEEEEEeCCCCCCCCCCcCCeEEEEecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCcc
Confidence 333333333 469999999876 566789999998643 24899999999631 0 1
Q ss_pred CceEEEeeEeecccccccCCCceeeEEEec--------ccCCCCCCCccee-e---CC--EEEEEEeeecC-C-CCceEE
Q 016641 229 NISVTKGVVSRVEPTQYVHGATQLMAIQID--------AAINPGNSGGPAI-M---GN--KVAGVAFQNLS-G-AENIGY 292 (385)
Q Consensus 229 ~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d--------~~i~~G~SGGPL~-~---~G--~vVGI~s~~~~-~-~~~~~~ 292 (385)
...+...+++...+...........+|... ...|.|||||||+ . +| .++||++++.. + ....+.
T Consensus 325 L~~~~v~ii~~~~C~~~~~~~i~~~~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~~C~~~~~pgV 404 (424)
T 3nxp_A 325 LQVVNLPIVERPVCKDSTRIRITDNMFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGEGCDRDGKYGF 404 (424)
T ss_dssp CEEEEEEBCCHHHHHHTCSSCCCTTEEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSSCTTTCCSCEE
T ss_pred ceEEEeeEEcHHHhhhhccCcCCCCeEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCCCCCCCCCCEE
Confidence 112333333322221111111111233331 2679999999999 5 34 69999998754 1 123567
Q ss_pred EEecchHHHHHHHHHH
Q 016641 293 IIPVPVIKHFITGVVE 308 (385)
Q Consensus 293 aip~~~i~~~l~~l~~ 308 (385)
...+....+|+++..+
T Consensus 405 yT~Vs~y~~WI~~~i~ 420 (424)
T 3nxp_A 405 YTHVFRLKKWIQKVID 420 (424)
T ss_dssp EEECTTCHHHHHHHHH
T ss_pred EEEHHHHHHHHHHHHH
Confidence 7888888888877653
No 117
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.44 E-value=3e-12 Score=122.42 Aligned_cols=169 Identities=14% Similarity=0.070 Sum_probs=107.7
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC-----CCcEEEEEEEEecC-------CCCeEEEEecCC-ccccccee
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG-----SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHF 205 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~-----~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~~ 205 (385)
...|+|.+|++.||||+|||+.+...+.|++.. +.+.+..+-+..++ .+||||||++.+ .+.+.+.|
T Consensus 117 ~~~CgGtLIs~~~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~p 196 (317)
T 3h5c_B 117 KDFCGGVIIRENFVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGLP 196 (317)
T ss_dssp CEEEEEEEEETTEEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCCC
T ss_pred ceeeeeEEeeCCEEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCccc
Confidence 357999999999999999999776667776631 23445555455554 469999999876 45667899
Q ss_pred eecCCcc------cCCCeEEEEecCCCCC-----CceEEEeeEeecccccccCCCceeeEEE--ecccCCCCCCCccee-
Q 016641 206 LELGDIP------FLQQAVAVVGYPQGGD-----NISVTKGVVSRVEPTQYVHGATQLMAIQ--IDAAINPGNSGGPAI- 271 (385)
Q Consensus 206 l~l~~~~------~~G~~V~~iG~p~~~~-----~~~~~~G~Vs~~~~~~~~~~~~~~~~i~--~d~~i~~G~SGGPL~- 271 (385)
+.|.... ..|+.+++.||..... ...+...+++................+. .....+.|||||||+
T Consensus 197 icLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDsGgPl~~ 276 (317)
T 3h5c_B 197 VCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVTR 276 (317)
T ss_dssp CBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEEEEECSCCCCCCCTTCEEEE
T ss_pred eeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCceeECCCCCCCcCCCCCCCEEE
Confidence 9998653 3489999999965211 1223333443322211111101111222 223456899999999
Q ss_pred -eCCE--EEEEEeeecCC-CCceEEEEecchHHHHHHHHH
Q 016641 272 -MGNK--VAGVAFQNLSG-AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 272 -~~G~--vVGI~s~~~~~-~~~~~~aip~~~i~~~l~~l~ 307 (385)
.+|+ ++||+++.... ....+....+....+|+++..
T Consensus 277 ~~~~~~~l~Gi~S~g~~~~~~~p~vyt~V~~y~~WI~~~i 316 (317)
T 3h5c_B 277 EHRGSWFLTGVLGSQPVGGQAHMVLVTKVSRYSLWFKQIM 316 (317)
T ss_dssp EETTEEEEEEEECCCCSSCCTTEEEEEEGGGCHHHHHHHH
T ss_pred ecCCEEEEEEEEEECCCCCCCcceEEEEhHHhHHHHHHHh
Confidence 4665 99999874322 223456777777888887653
No 118
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.44 E-value=2.6e-13 Score=118.86 Aligned_cols=117 Identities=21% Similarity=0.176 Sum_probs=77.7
Q ss_pred CcceEEEEEec-CCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCC
Q 016641 138 RETTGSGFVIP-GKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQ 216 (385)
Q Consensus 138 ~~~~GSGfiI~-~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~ 216 (385)
..+.|+||.|+ +++||||+|||.+.+. .++. ++.++.. .+|+..|+|++++.... ..+|.++++.....|.
T Consensus 28 ~~GsGt~F~i~g~~~VvTA~HVVg~~~~-vVt~--~g~r~~~---~f~~~~D~All~i~~~~--g~~P~lKlA~~~~~G~ 99 (213)
T 3fan_A 28 SMGSGGVFTIDGKIKCVTAAHVLTGNSA-RVSG--VGFNQML---DFDVKGDFAIADCPNWQ--GVAPKAQFCEDGWTGR 99 (213)
T ss_dssp SEEEEEEEEETTEEEEEEEGGGSBTTEE-EEEE--TTEEEEE---ECEEETTEEEEECTTCC--SCCCBCCBCCTTCCEE
T ss_pred CCCceEEEEECCcEEEEEeccEeCCCCE-EEec--CCcEEEE---EecCCCcEEEEEccCcC--CCCCcceeeeeeccCc
Confidence 34788899998 6799999999999887 6665 6666643 66899999999996421 2588888875433332
Q ss_pred eEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEeeec
Q 016641 217 AVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAFQNL 284 (385)
Q Consensus 217 ~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s~~~ 284 (385)
..+..-+ ....|.+..- ..+.+ .++|||||||+ .+|+||||++...
T Consensus 100 a~~~~~~-------gv~~G~i~~~------------~al~~---T~pGdSGsPVvn~dG~VIGVHt~s~ 146 (213)
T 3fan_A 100 AYWLTSS-------GVEPGVIGNG------------FAFCF---TACGDSGSPVITEAGELVGVHTGSN 146 (213)
T ss_dssp EEEEETT-------EEEEEEEETT------------EEEES---SCCCSTTCEEEETTSCEEEEEEC--
T ss_pred eEEEEcc-------CccccccccC------------CEEEe---cCCCCCCCccCCCCCcEEEEEeccC
Confidence 2222111 1222333210 01222 26899999999 9999999999753
No 119
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.43 E-value=2.1e-12 Score=127.34 Aligned_cols=192 Identities=15% Similarity=0.187 Sum_probs=118.4
Q ss_pred EEEee-ecCCCCCCCCCCCC----------CCcceEEEEEecCCEEEecccccCCC----ceEEEEEcC-----C-----
Q 016641 118 KIFTV-SSSPNYGLPWQNKS----------QRETTGSGFVIPGKKILTNAHVVADS----TFVLVRKHG-----S----- 172 (385)
Q Consensus 118 ~I~~~-~~~~~~~~p~~~~~----------~~~~~GSGfiI~~g~ILT~aHvv~~~----~~i~V~~~~-----~----- 172 (385)
+|... .......+||.... .....|.|.+|++.||||+|||+.+. ..+.|++.. +
T Consensus 129 rIvgG~~~a~~~e~PW~v~l~~~~~~~~~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~ 208 (394)
T 2b9l_A 129 KITGQTNEAEYGEFPWMVAVLKANVIPGSGEEQLVCGGSLIAPSVVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLP 208 (394)
T ss_dssp EEESCSSBCCTTSSTTEEEEEECC------CCSEEEEEEEEETTEEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSC
T ss_pred eeeCCccccCCCCCCcEEEEeeccccccccccceEeeEEEEeCCEEEeccceecCCCCCcccEEEEeceeeccCCcCCCc
Confidence 55554 34445566665321 12457999999999999999999743 457776631 1
Q ss_pred CcEEEEEEEEecC-------CCCeEEEEecCC-cccccceeeecCCcc--cCCCeEEEEecCCCCC---------CceEE
Q 016641 173 PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHFLELGDIP--FLQQAVAVVGYPQGGD---------NISVT 233 (385)
Q Consensus 173 g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~~l~l~~~~--~~G~~V~~iG~p~~~~---------~~~~~ 233 (385)
.+.+..+-+..++ .+||||||++.+ .+.+.+.|+.|.... ..++.+++.||..... ...+.
T Consensus 209 ~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~ 288 (394)
T 2b9l_A 209 YQERKIRQVIIHSNFNPKTVVNDVALLLLDRPLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQ 288 (394)
T ss_dssp CEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEE
T ss_pred cEEEEEEEEEECCCCCCCccccceEEEEecCccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEE
Confidence 1234444444444 369999999876 456678999998643 3478899999975321 12233
Q ss_pred EeeEeeccccc-ccC---C---CceeeEEEe----cccCCCCCCCccee-eC----C--EEEEEEeeecC-C-CCceEEE
Q 016641 234 KGVVSRVEPTQ-YVH---G---ATQLMAIQI----DAAINPGNSGGPAI-MG----N--KVAGVAFQNLS-G-AENIGYI 293 (385)
Q Consensus 234 ~G~Vs~~~~~~-~~~---~---~~~~~~i~~----d~~i~~G~SGGPL~-~~----G--~vVGI~s~~~~-~-~~~~~~a 293 (385)
..+++...+.. +.. + .....+|.. ....|.|||||||+ .. | .++||++++.. + ....+..
T Consensus 289 v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCAg~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~~C~~~~~PgVY 368 (394)
T 2b9l_A 289 LPTVDRDKCQADLRNTRLGLKFVLDQTFVCAGGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGIGCGDENVPGVY 368 (394)
T ss_dssp ECEECHHHHHHHHHTTTTCTTCCCCTTEEEECCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTTCCCBSSSCEEE
T ss_pred EEEECHHHHHHHHhhcccccceecCCCEEEeeCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECCCCCCCCCCeEE
Confidence 33444322211 100 0 001122332 24679999999999 41 3 59999998653 1 1234677
Q ss_pred EecchHHHHHHHHHHc
Q 016641 294 IPVPVIKHFITGVVEH 309 (385)
Q Consensus 294 ip~~~i~~~l~~l~~~ 309 (385)
.-+....+|+++..+.
T Consensus 369 T~V~~y~~WI~~~i~~ 384 (394)
T 2b9l_A 369 ANVAHFRNWIDQEMQA 384 (394)
T ss_dssp EEGGGGHHHHHHHHHH
T ss_pred EEHHHhHHHHHHHHHh
Confidence 7788888888876653
No 120
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.42 E-value=1.5e-11 Score=114.84 Aligned_cols=187 Identities=14% Similarity=0.179 Sum_probs=111.8
Q ss_pred hCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEE
Q 016641 112 ALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQV 180 (385)
Q Consensus 112 ~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v 180 (385)
-.|.+|.|...... ......|.|.||++.||||+|||+.+. ..+.|.... .++.+..+.
T Consensus 34 ~~Pw~v~l~~~~~~----------~~~~~~CgGsLIs~~~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~ 103 (276)
T 2vnt_A 34 NQPWFAAIYRRHRG----------GSVTYVCGGSLMSPCWVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVEN 103 (276)
T ss_dssp GSTTEEEEEEECSS----------SCEEEEEEEEEEETTEEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEE
T ss_pred CCCcEEEEEEecCC----------CcceeEEEEEEeeCCEEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEE
Confidence 45777777653211 112347999999999999999999753 334454321 223455544
Q ss_pred EEecC---------CCCeEEEEecCC-----cccccceeeecCCcc---cCCCeEEEEecCCCCCC--------ceEEEe
Q 016641 181 EAVGH---------ECDLAILIVESD-----EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGDN--------ISVTKG 235 (385)
Q Consensus 181 ~~~d~---------~~DlAlLkv~~~-----~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~--------~~~~~G 235 (385)
+..++ +.|||||+++.. .+...+.|+.|.... ..|+.+.+.||...... ..+...
T Consensus 104 i~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~ 183 (276)
T 2vnt_A 104 LILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVK 183 (276)
T ss_dssp EEECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEE
T ss_pred EEEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeee
Confidence 44443 369999999753 245578888887543 44889999998653221 112233
Q ss_pred eEeecccccccC-CC--ceeeEEEe----cccCCCCCCCccee--eCCE--EEEEEeeecC-C-CCceEEEEecchHHHH
Q 016641 236 VVSRVEPTQYVH-GA--TQLMAIQI----DAAINPGNSGGPAI--MGNK--VAGVAFQNLS-G-AENIGYIIPVPVIKHF 302 (385)
Q Consensus 236 ~Vs~~~~~~~~~-~~--~~~~~i~~----d~~i~~G~SGGPL~--~~G~--vVGI~s~~~~-~-~~~~~~aip~~~i~~~ 302 (385)
+++...+..... .. ....+... ....|.|||||||+ .+|+ ++||+|++.. . ....+...-+...++|
T Consensus 184 i~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyt~V~~y~~W 263 (276)
T 2vnt_A 184 LISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGRGCALKDKPGVYTRVSHFLPW 263 (276)
T ss_dssp EECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECSSSSBTTBCEEEEEGGGGHHH
T ss_pred EecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECCCCCCCCCCEEEEEHHHHHHH
Confidence 333322211100 00 00011111 23579999999999 4554 9999998754 1 1223666778888888
Q ss_pred HHHHHH
Q 016641 303 ITGVVE 308 (385)
Q Consensus 303 l~~l~~ 308 (385)
+++..+
T Consensus 264 I~~~~~ 269 (276)
T 2vnt_A 264 IRSHTK 269 (276)
T ss_dssp HHHHHS
T ss_pred HHHHhh
Confidence 888764
No 121
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.41 E-value=4.3e-12 Score=125.66 Aligned_cols=190 Identities=17% Similarity=0.164 Sum_probs=114.9
Q ss_pred EEeeecCCCCCCCCCCCC------CCcceEEEEEecCCEEEecccccCCC--ceEEEEEcC-----C-------------
Q 016641 119 IFTVSSSPNYGLPWQNKS------QRETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG-----S------------- 172 (385)
Q Consensus 119 I~~~~~~~~~~~p~~~~~------~~~~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~~-----~------------- 172 (385)
|..........+||.... .....|.|.+|++.||||+|||+.+. ..+.|++.. +
T Consensus 119 IvgG~~a~~~e~Pw~v~L~~~~~g~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~ 198 (408)
T 2xxl_A 119 VSNGYEVKLSSRPWMALLRYQQFGESRFLCGGAMISERYILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCA 198 (408)
T ss_dssp CCSSCBCCTTSSTTEEEEEEECSSSEEEEEEEEEEETTEEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEEC
T ss_pred eECCEECCCCCCCcEEEEEeecCCceeEEEEEEEEECCEEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccC
Confidence 333333444555664321 12357999999999999999999753 466676531 0
Q ss_pred --CcEEEEEEEEecC-------CCCeEEEEecCC-cccccceeeecCCcc------cCCCeEEEEecCCCCCC------c
Q 016641 173 --PTKYRAQVEAVGH-------ECDLAILIVESD-EFWEGMHFLELGDIP------FLQQAVAVVGYPQGGDN------I 230 (385)
Q Consensus 173 --g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~~~~l~l~~~~------~~G~~V~~iG~p~~~~~------~ 230 (385)
.+.+..+-+..++ .+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||...... .
T Consensus 199 ~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~ 278 (408)
T 2xxl_A 199 PPVVNVGIEKHLIHEKYDARHIMHDIALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLL 278 (408)
T ss_dssp CCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCE
T ss_pred CceEEEeEEEEEeCCCCCccccccceEEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchhe
Confidence 1123333333443 479999999876 466789999998642 34889999999753221 1
Q ss_pred eEEEeeEeecccccccCCCceeeEEEe----cccCCCCCCCcce------e-e-CC--EEEEEEeeecCC--C-CceEEE
Q 016641 231 SVTKGVVSRVEPTQYVHGATQLMAIQI----DAAINPGNSGGPA------I-M-GN--KVAGVAFQNLSG--A-ENIGYI 293 (385)
Q Consensus 231 ~~~~G~Vs~~~~~~~~~~~~~~~~i~~----d~~i~~G~SGGPL------~-~-~G--~vVGI~s~~~~~--~-~~~~~a 293 (385)
.+...+++...+............+.. ....|.||||||| + . +| .++||++++..+ . ...+..
T Consensus 279 ~~~v~iv~~~~C~~~~~~~~~~~~iCAg~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G~~~Cg~~~~PgVY 358 (408)
T 2xxl_A 279 QANVPLQPRSACSQAYRRAVPLSQLCVGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQGVVTCGQISLPGLY 358 (408)
T ss_dssp EEEEEEECHHHHHHHHTSCCCTTEEEECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEECCCCTTSCCCCEEE
T ss_pred EeeeeecCHHHHHHHhcccCCCceEeecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEECCCCCCCCCCCeEE
Confidence 233334433222111111001122332 2367899999999 6 2 44 689999987321 1 224677
Q ss_pred EecchHHHHHHHHHH
Q 016641 294 IPVPVIKHFITGVVE 308 (385)
Q Consensus 294 ip~~~i~~~l~~l~~ 308 (385)
.-+....+|+++..+
T Consensus 359 TrVs~y~~WI~~~i~ 373 (408)
T 2xxl_A 359 TNVGEYVQWITDTMA 373 (408)
T ss_dssp EEGGGGHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHh
Confidence 778888888887654
No 122
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=99.34 E-value=1e-11 Score=132.08 Aligned_cols=190 Identities=18% Similarity=0.197 Sum_probs=116.1
Q ss_pred EEeeecCCCCCCCCCCCCC---CcceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEec
Q 016641 119 IFTVSSSPNYGLPWQNKSQ---RETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVG 184 (385)
Q Consensus 119 I~~~~~~~~~~~p~~~~~~---~~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d 184 (385)
|..........+||+.... ....|+|.||++.||||||||+.+. ..+.|.+.. ..+.+...-+..+
T Consensus 562 IvGG~~a~~~~~PW~VsL~~~~~~~~CGGSLIs~~wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~h 641 (791)
T 4dur_A 562 VVGGCVAHPHSWPWQVSLRTRFGMHFCGGTLISPEWVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLE 641 (791)
T ss_dssp CTTCEECCTTSSTTEEEEECTTSCEEEEEEEEETTEEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEEC
T ss_pred eECCEECCCCCCCeEEEEEecCCCeEEEEEEEeCCEEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECC
Confidence 3333334444556654321 3457999999999999999999753 345565531 1223444333334
Q ss_pred -CCCCeEEEEecCC-cccccceeeecCCcc---cCCCeEEEEecCCCCC------CceEEEeeEeecccccc--cCCCce
Q 016641 185 -HECDLAILIVESD-EFWEGMHFLELGDIP---FLQQAVAVVGYPQGGD------NISVTKGVVSRVEPTQY--VHGATQ 251 (385)
Q Consensus 185 -~~~DlAlLkv~~~-~~~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~------~~~~~~G~Vs~~~~~~~--~~~~~~ 251 (385)
..+||||||++.+ .+.+.+.|+.|.... ..|..+++.||..... ...+...+++...+... ......
T Consensus 642 p~~nDIALLkL~~pv~~s~~V~PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~ 721 (791)
T 4dur_A 642 PTRKDIALLKLSSPAVITDKVIPACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQ 721 (791)
T ss_dssp TTCCSCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCC
T ss_pred CCCCceEEEEecCccccCCceeeeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCC
Confidence 3589999999876 456678999997543 3488999999975321 12333444443322211 111111
Q ss_pred eeEEEe-----cccCCCCCCCccee-e-CC--EEEEEEeeecC--CCCceEEEEecchHHHHHHHHHH
Q 016641 252 LMAIQI-----DAAINPGNSGGPAI-M-GN--KVAGVAFQNLS--GAENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 252 ~~~i~~-----d~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~--~~~~~~~aip~~~i~~~l~~l~~ 308 (385)
...|.. ....|.|||||||+ . +| .|+||++++.. .....+...-+....++|++.++
T Consensus 722 ~~~iCAg~~~gg~daC~GDSGGPLv~~~~~~~~LvGIvS~G~gC~~~~~PgVYTrVs~y~dWI~~~i~ 789 (791)
T 4dur_A 722 STELCAGHLAGGTDSCQGDSGGPLVCFEKDKYILQGVTSWGLGCARPNKPGVYVRVSRFVTWIEGVMR 789 (791)
T ss_dssp TTEEEESCSSSCCCBCCSCTTCEEEEEETTEEEEEEECCTTTCCBBTTBCEEEEEGGGTHHHHHHHHH
T ss_pred CCeEEeccCCCCCCCCCCCcccceEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHHHH
Confidence 122332 24568999999999 4 44 49999998654 11235677888888888887664
No 123
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=99.32 E-value=8.6e-12 Score=130.01 Aligned_cols=168 Identities=18% Similarity=0.163 Sum_probs=97.3
Q ss_pred cceEEEEEecCCEEEecccccCCC---ceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-cc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EF 199 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~ 199 (385)
...|.|.||++.||||+|||+.+. ..+.|.+.. +...+..+-+..++ .+||||||++.+ .+
T Consensus 413 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~~ 492 (625)
T 2f83_A 413 RHLCGGSIIGNQWILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 492 (625)
T ss_dssp EEEEEEEECSSSEEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCCC
T ss_pred cEEEEEEEECCCEEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCcccC
Confidence 357999999999999999999753 346665531 12334454444444 469999999876 45
Q ss_pred cccceeeecCCcc---cCCCeEEEEecCCCCCC-------ceEEEeeEeeccccc-ccC---CCceeeE--EEecccCCC
Q 016641 200 WEGMHFLELGDIP---FLQQAVAVVGYPQGGDN-------ISVTKGVVSRVEPTQ-YVH---GATQLMA--IQIDAAINP 263 (385)
Q Consensus 200 ~~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~-------~~~~~G~Vs~~~~~~-~~~---~~~~~~~--i~~d~~i~~ 263 (385)
.+.+.|+.|.... ..++.+++.||...... ..+...+++...+.. +.. ....... ..-....|.
T Consensus 493 ~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C~ 572 (625)
T 2f83_A 493 TDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACK 572 (625)
T ss_dssp BTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----------C
T ss_pred CCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCCCCCcCCC
Confidence 6678999998643 34888999999743210 112222232221111 100 0111110 112345789
Q ss_pred CCCCccee--eCC--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHH
Q 016641 264 GNSGGPAI--MGN--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGV 306 (385)
Q Consensus 264 G~SGGPL~--~~G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l 306 (385)
|||||||+ .+| .++||++++.. + ....+...-+....+|+++.
T Consensus 573 GDSGGPLv~~~~~~~~lvGIvS~G~~C~~~~~P~vyT~V~~y~~WI~~~ 621 (625)
T 2f83_A 573 GDSGGPLSCKHNEVWHLVGITSWGEGCAQRERPGVYTNVVEYVDWILEK 621 (625)
T ss_dssp CCTTCEEEEEETTEEEEEEEEEECCC----CCCCEEEEGGGGHHHHHHT
T ss_pred CCcccceEEEECCeEEEEEEEEeCCCCCCCCCCeEEEEHHHHHHHHHHH
Confidence 99999999 466 59999998653 1 12235566667777777653
No 124
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=99.29 E-value=2.2e-11 Score=129.26 Aligned_cols=185 Identities=15% Similarity=0.148 Sum_probs=108.1
Q ss_pred CCCCCCCCCC------CCCCcceEEEEEecCCEEEecccccCC---CceEEEEEcCCCcEEEEEEEEecC----------
Q 016641 125 SPNYGLPWQN------KSQRETTGSGFVIPGKKILTNAHVVAD---STFVLVRKHGSPTKYRAQVEAVGH---------- 185 (385)
Q Consensus 125 ~~~~~~p~~~------~~~~~~~GSGfiI~~g~ILT~aHvv~~---~~~i~V~~~~~g~~~~a~v~~~d~---------- 185 (385)
.....+||+. .......|+|.+|++.||||+|||+.+ ...+.|.+....+.+..+-+..++
T Consensus 463 ~~~~~~Pw~~~v~~~~~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~ 542 (741)
T 3hrz_D 463 TDYHKQPWQAKISVIRPSKGHESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEA 542 (741)
T ss_dssp CCTTTCTTEEEEEECCCC-----EEEEECSSSEEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGG
T ss_pred ccccCcCCeEEEEEEeCCCCCCEEEEEEecCCEEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCccccccc
Confidence 3345678821 122345799999999999999999974 456778775444556665554443
Q ss_pred ------CCCeEEEEecCC-cccccceeeecCCcc--------cCCCeEEEEecCCCCCC--------------ceEEEee
Q 016641 186 ------ECDLAILIVESD-EFWEGMHFLELGDIP--------FLQQAVAVVGYPQGGDN--------------ISVTKGV 236 (385)
Q Consensus 186 ------~~DlAlLkv~~~-~~~~~~~~l~l~~~~--------~~G~~V~~iG~p~~~~~--------------~~~~~G~ 236 (385)
.+||||||++.+ .+.+.+.|+.|.... ..|..+.+.||...... ......+
T Consensus 543 ~~~~~~~nDIALlkL~~pv~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg~~~~~~~~~~~~~~~~~~L~~~~v~i 622 (741)
T 3hrz_D 543 GIPEFYDYDVALIKLKNKLKYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYI 622 (741)
T ss_dssp TCSCCCTTCCEEEEESSCCCCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEE
T ss_pred ccCCccCCcEEEEEECCcCcCCCCccccccCCcccccchhccCCCCccccccccccccccccceeccccccccccceeEe
Confidence 359999999876 456678999997432 23556666665322110 0111122
Q ss_pred Eeec---cccc-------cc-----CCCceeeEEEe-------cccCCCCCCCccee-e-CCE--EEEEEeeecCCCCc-
Q 016641 237 VSRV---EPTQ-------YV-----HGATQLMAIQI-------DAAINPGNSGGPAI-M-GNK--VAGVAFQNLSGAEN- 289 (385)
Q Consensus 237 Vs~~---~~~~-------~~-----~~~~~~~~i~~-------d~~i~~G~SGGPL~-~-~G~--vVGI~s~~~~~~~~- 289 (385)
+... .+.. +. .......++.. +...|.|||||||+ . +|+ ++||+|++.....+
T Consensus 623 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~i~~~~lCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~lvGIvS~G~~~~C~~ 702 (741)
T 3hrz_D 623 KNGDKKGSCERDAQYAPGYDKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKN 702 (741)
T ss_dssp ECSTTHHHHHHGGGGSTTCTTCSSGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESSCCCC-
T ss_pred ecCcccchhhhhhhhccccccccccccccCCCeEecCCcCCCCCCCcCcCcccCceEEeeCCeEEEEEEEeecCCcccCC
Confidence 2200 0000 00 00011123333 34579999999999 3 443 99999998621222
Q ss_pred ------e-----EEEEecchHHHHHHHHHHc
Q 016641 290 ------I-----GYIIPVPVIKHFITGVVEH 309 (385)
Q Consensus 290 ------~-----~~aip~~~i~~~l~~l~~~ 309 (385)
. ++...+...++||++..+.
T Consensus 703 ~~~~~~p~~~~~~vyt~V~~~~~WI~~~i~~ 733 (741)
T 3hrz_D 703 QKRQKQVPAHARDFHINLFQVLPWLKEKLQD 733 (741)
T ss_dssp -----CCCTTCEEEEEEGGGSHHHHHHHTTT
T ss_pred cccccCCCCCccceEEEhHHhHHHHHHHhcC
Confidence 2 6777888899999887754
No 125
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=99.28 E-value=1.4e-11 Score=124.67 Aligned_cols=171 Identities=13% Similarity=0.087 Sum_probs=101.6
Q ss_pred cceEEEEEecCCEEEecccccCCC---ceEEEEEcCCCcEEEEEEEEecC----------------CCCeEEEEecCC-c
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHGSPTKYRAQVEAVGH----------------ECDLAILIVESD-E 198 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~~g~~~~a~v~~~d~----------------~~DlAlLkv~~~-~ 198 (385)
...|.|.+|++.||||+|||+.+. ..+.|.+....+.+..+-+..++ .+||||||++.+ .
T Consensus 241 ~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v~ 320 (497)
T 1rrk_A 241 HESCMGAVVSEYFVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKLK 320 (497)
T ss_dssp CEEEEEEECSSSEEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCCC
T ss_pred CceeEEEEecCCEEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCCc
Confidence 357999999999999999999753 56788875434555555444432 369999999876 4
Q ss_pred ccccceeeecCCcc--------cCCCeEEEEecCCC--------------CCCceEEEeeEee---ccccc-------cc
Q 016641 199 FWEGMHFLELGDIP--------FLQQAVAVVGYPQG--------------GDNISVTKGVVSR---VEPTQ-------YV 246 (385)
Q Consensus 199 ~~~~~~~l~l~~~~--------~~G~~V~~iG~p~~--------------~~~~~~~~G~Vs~---~~~~~-------~~ 246 (385)
+.+.+.|++|+... ..|..+.+.||... .........+++. ..+.. +.
T Consensus 321 ~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~~ 400 (497)
T 1rrk_A 321 YGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGYD 400 (497)
T ss_dssp CBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTCT
T ss_pred CCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhccccc
Confidence 66789999998542 23555444443211 0001222333331 11111 00
Q ss_pred C-----CCceeeEEEec-------ccCCCCCCCccee-e-CC--EEEEEEeeecCCCCc--------e----EEEEecch
Q 016641 247 H-----GATQLMAIQID-------AAINPGNSGGPAI-M-GN--KVAGVAFQNLSGAEN--------I----GYIIPVPV 298 (385)
Q Consensus 247 ~-----~~~~~~~i~~d-------~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~~~~~--------~----~~aip~~~ 298 (385)
. .......|... ...|.|||||||+ . +| .++||+|++....++ - +...-+..
T Consensus 401 ~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~~~C~~~~~~~~~P~~~r~vyt~V~~ 480 (497)
T 1rrk_A 401 KVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGVVDVCKNQKRQKQVPAHARDFHINLFQ 480 (497)
T ss_dssp TCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCCC--------CCTTCEEEEEEGGG
T ss_pred ccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecCCCCCCCccccCCCCCccceeeeeHHH
Confidence 0 00011233332 3579999999999 3 45 499999997531122 1 24556777
Q ss_pred HHHHHHHHHHc
Q 016641 299 IKHFITGVVEH 309 (385)
Q Consensus 299 i~~~l~~l~~~ 309 (385)
..+|+++..+.
T Consensus 481 ~~~WI~~~~~~ 491 (497)
T 1rrk_A 481 VLPWLKEKLQD 491 (497)
T ss_dssp GHHHHHHHTTT
T ss_pred HHHHHHHHhCc
Confidence 88888776644
No 126
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=99.24 E-value=7.6e-12 Score=101.39 Aligned_cols=71 Identities=24% Similarity=0.293 Sum_probs=60.4
Q ss_pred CeeeeeeccCccccccccHHHHhhcCCC-----CccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 310 GKYVGFCSLGLSCQTTENVQLRNNFGMR-----SEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 310 g~~~~~~~lGi~~~~~~~~~~~~~~g~~-----~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
|++. ++|||+.++++ ++++++.++++ ....|++|.+|.++|||+++ |++||+|++|||++|.+..++.+.|
T Consensus 1 G~v~-r~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l 77 (113)
T 2pzd_A 1 GSHM-RRYIGVMMLTL-SPSILAELQLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAV 77 (113)
T ss_dssp -----CEECCEEEEEC-CHHHHHHHHHHCSSCCCCSSCEEEEEEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHH
T ss_pred Cccc-ccEeEEEEEeC-CHHHHHHhccccccccCCCCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 4565 89999999999 78888888873 23589999999999999999 9999999999999999999988765
No 127
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.24 E-value=8.9e-11 Score=103.62 Aligned_cols=162 Identities=17% Similarity=0.122 Sum_probs=105.0
Q ss_pred hCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec---CCEEEecccccCCCc-eEEEEEcCCCcEEE-----EEEEE
Q 016641 112 ALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP---GKKILTNAHVVADST-FVLVRKHGSPTKYR-----AQVEA 182 (385)
Q Consensus 112 ~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~---~g~ILT~aHvv~~~~-~i~V~~~~~g~~~~-----a~v~~ 182 (385)
...+||.|... . ...|.|+.+. ..++|||+||+.+.. .+.... ++..++ .....
T Consensus 14 ~P~svv~l~~~--------------d-~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k--~g~~ip~~~~~~~~~~ 76 (191)
T 1zyo_A 14 EPASLVAIKSG--------------P-TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAK--AGKQVSVEDWEISMSS 76 (191)
T ss_dssp SCSSEEEEEET--------------T-EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEE--TTEEEECCSCEEEEEE
T ss_pred CCCeEEEEEeC--------------C-eEEEEEEEEEECCCcEEEEChhhCcCCcceeeecC--CCCEEEcccceeeEcc
Confidence 34568888872 1 3578888885 459999999998753 222222 444443 33444
Q ss_pred ecCCCCeEEEEecCCccc-ccceeeecCCcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccC
Q 016641 183 VGHECDLAILIVESDEFW-EGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAI 261 (385)
Q Consensus 183 ~d~~~DlAlLkv~~~~~~-~~~~~l~l~~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i 261 (385)
.|+..|+||++++..-.. =.+.++.|... ..++.|.++|++.... +....|+....+ .. ..+++++..
T Consensus 77 ~d~~~D~all~vp~~~~s~lg~~~a~~~~~-~~~~~vt~yg~~~~~~-~~s~~g~~~~~~------~~---~~~~~~~~T 145 (191)
T 1zyo_A 77 SDKMLDFAIVRVPTHVWSKLGVKSTPLVCP-SSKDVITCYGGSSSDC-LMSGVGSSSTSE------FT---WKLTHTCPT 145 (191)
T ss_dssp CCTTTCEEEEECCHHHHHHHTCCCCCBCCC-CSCEEEEEEEESSTTS-EEEEEEEEEECS------ST---TEEEECCCC
T ss_pred CCCCCcEEEEEcCCChhhhcCcceeEeecC-CCCccEEEEeecCCCC-Eeecccceeecc------CC---cEEEEEcCC
Confidence 577899999999864200 02445444322 3488999999987544 344455332211 01 247788888
Q ss_pred CCCCCCcceeeCCEEEEEEeeecCCCCceEEEEecchHHHH
Q 016641 262 NPGNSGGPAIMGNKVAGVAFQNLSGAENIGYIIPVPVIKHF 302 (385)
Q Consensus 262 ~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~aip~~~i~~~ 302 (385)
.+|+||+|++....+|||+.... ...+.+.++-+..++.+
T Consensus 146 ~~G~SGsP~~ng~~IVGvh~G~~-~~~~~N~a~n~~~~~~~ 185 (191)
T 1zyo_A 146 AAGWSGTPLYSSRGVVGMHVGFE-EIGKLNRGVNMFYVANY 185 (191)
T ss_dssp CTTCTTCEEECSSCEEEEEEEEE-ETTTEEEEECHHHHHHH
T ss_pred CCCCCCCcEEcCCeEEEEEeCcc-cCCceeeeeehHHHhhh
Confidence 99999999994457889998743 23567888887777765
No 128
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=99.22 E-value=1.1e-10 Score=120.17 Aligned_cols=189 Identities=22% Similarity=0.149 Sum_probs=93.4
Q ss_pred EEEeeecCCCCCCCCCCCCC--CcceEEEEEecCCEEEecccccCCC--ceEEEEEcC---------CCcEEEEEEEEec
Q 016641 118 KIFTVSSSPNYGLPWQNKSQ--RETTGSGFVIPGKKILTNAHVVADS--TFVLVRKHG---------SPTKYRAQVEAVG 184 (385)
Q Consensus 118 ~I~~~~~~~~~~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvv~~~--~~i~V~~~~---------~g~~~~a~v~~~d 184 (385)
+|..........+||+.... ....+.|.||++.||||||||+.+. ..+.|.+.. ..+.+..+-+..+
T Consensus 321 rIvgG~~a~~g~~Pw~v~l~~~~~~~CGGsLIs~~~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~H 400 (565)
T 2xrc_A 321 RIVGGKRAQLGDLPWQVAIKDASGITCGGIYIGGCWILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFH 400 (565)
T ss_dssp -----------CCTTBCEEEESSSCCCCCEEEETTEEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEEC
T ss_pred ceECCEECCCCCCCcEEEEecCCceeeeEEEEeCCEEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeC
Confidence 44444445556678865432 2346999999999999999999753 345554321 1223344434444
Q ss_pred C-------CCCeEEEEecCCc-cc----ccceeeecCCcc---cCCCeEEEEecCCCCCC------ceEEEeeEeecccc
Q 016641 185 H-------ECDLAILIVESDE-FW----EGMHFLELGDIP---FLQQAVAVVGYPQGGDN------ISVTKGVVSRVEPT 243 (385)
Q Consensus 185 ~-------~~DlAlLkv~~~~-~~----~~~~~l~l~~~~---~~G~~V~~iG~p~~~~~------~~~~~G~Vs~~~~~ 243 (385)
+ .+||||||++.+. +. ..+.|+.|+... ..|+.+++.||...... ..+...+++.- ..
T Consensus 401 p~Y~~~~~~nDIALlkL~~~v~~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C-~~ 479 (565)
T 2xrc_A 401 ENYNAGTYQNDIALIEMKKDGNKKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNC-SK 479 (565)
T ss_dssp TTCCTTTCTTCCEEEEECCCSSSSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCT-HH
T ss_pred CCCCCCcccccceeeeeccccccccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHh-HH
Confidence 3 4699999998762 21 246788887543 34899999999753221 11222222210 11
Q ss_pred cccCCCceeeEEEe-----cccCCCCCCCccee-e--CC--EEEEEEeeecC-C-CCceEEEEecchHHHHHHHHH
Q 016641 244 QYVHGATQLMAIQI-----DAAINPGNSGGPAI-M--GN--KVAGVAFQNLS-G-AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 244 ~~~~~~~~~~~i~~-----d~~i~~G~SGGPL~-~--~G--~vVGI~s~~~~-~-~~~~~~aip~~~i~~~l~~l~ 307 (385)
.+........++.. ....|.|||||||+ . +| .++||+|++.. + ....+...-+....+||++..
T Consensus 480 ~~~~~~~~~~~iCAg~~~g~~d~C~GDSGGPLv~~~~~~~~~lvGIvS~G~~C~~~~~PgVYTrVs~y~~WI~~~i 555 (565)
T 2xrc_A 480 FYGNRFYEKEMECAGTYDGSIDACKGDSGGPLVCMDANNVTYVWGVVSWGENCGKPEFPGVYTKVANYFDWISYHV 555 (565)
T ss_dssp HHTTSCCTTTEEEEEEC----------CCCEEEEECTTCCEEEEEEECC------CCCCEEEEEGGGGHHHHHHHC
T ss_pred hhccCcCCCceEEeCCCCCCCccCCCccccceEEEeCCCcEEEEEEEeeCCCCCCCCCCEEEEEHHHHHHHHHHHh
Confidence 11100000012222 23578999999999 5 34 48999998754 1 123466677777788877654
No 129
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=99.21 E-value=2e-11 Score=124.05 Aligned_cols=180 Identities=12% Similarity=0.081 Sum_probs=101.7
Q ss_pred CCCCCCCCC--CcceEEEEEecCCEEEecccccCCC---ceEEEEEcC----CCcEEEEEEEEecC--------------
Q 016641 129 GLPWQNKSQ--RETTGSGFVIPGKKILTNAHVVADS---TFVLVRKHG----SPTKYRAQVEAVGH-------------- 185 (385)
Q Consensus 129 ~~p~~~~~~--~~~~GSGfiI~~g~ILT~aHvv~~~---~~i~V~~~~----~g~~~~a~v~~~d~-------------- 185 (385)
.+||+.... ....|.|.+|++.||||+|||+.+. ..+.|.+.. .++.+..+-+..++
T Consensus 234 ~~Pw~v~l~~~~~~~CgGsLIs~~~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~ 313 (509)
T 2odp_A 234 RTPWHVTIKPKSQETCRGALISDQWVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILE 313 (509)
T ss_dssp HCTTEEEEEC----CEEEEECSSSEEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCC
T ss_pred CCCcEEEEEeCCCcEEEEEEEcCCEEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCcccccccccccc
Confidence 356654221 2347999999999999999999753 345666532 13445554444433
Q ss_pred --CCCeEEEEecCC-cccccceeeecCCcc--------cCCCeEEEEecCCCCCC-----------ceEEEeeEe---ec
Q 016641 186 --ECDLAILIVESD-EFWEGMHFLELGDIP--------FLQQAVAVVGYPQGGDN-----------ISVTKGVVS---RV 240 (385)
Q Consensus 186 --~~DlAlLkv~~~-~~~~~~~~l~l~~~~--------~~G~~V~~iG~p~~~~~-----------~~~~~G~Vs---~~ 240 (385)
.+||||||++.+ .+.+.+.|++|+... ..|..+.+.||...... ..+...++. ..
T Consensus 314 ~~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~ 393 (509)
T 2odp_A 314 FYGDDIALLKLAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWT 393 (509)
T ss_dssp CCTTCCEEEEESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHH
T ss_pred ccCCCeEEEEECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHH
Confidence 369999999876 466789999998542 23666665555321110 112222221 11
Q ss_pred cccc--------cc-----CCCceeeEEEec----ccCCCCCCCccee-e-CC--EEEEEEeeecCCCCc----------
Q 016641 241 EPTQ--------YV-----HGATQLMAIQID----AAINPGNSGGPAI-M-GN--KVAGVAFQNLSGAEN---------- 289 (385)
Q Consensus 241 ~~~~--------~~-----~~~~~~~~i~~d----~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~~~~~---------- 289 (385)
.+.. +. ........+... ...|.|||||||+ . +| .++||+|++....++
T Consensus 394 ~C~~~~~~~~~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~~~~C~~~~~~~~~~~ 473 (509)
T 2odp_A 394 SCAEVVSQEKTMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGLYNPCLGSADKNSRKR 473 (509)
T ss_dssp HHHHGGGGCTTTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEESCCTTC-----CCCCC
T ss_pred HHHHHhhcccccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcCCCCCCCccccccccc
Confidence 1111 10 000111234432 3579999999999 4 34 499999997531121
Q ss_pred -------e--EEEEecchHHHHHHHHHH
Q 016641 290 -------I--GYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 290 -------~--~~aip~~~i~~~l~~l~~ 308 (385)
+ ++...+....+|+++..+
T Consensus 474 ~~~Pg~~y~~~vyt~V~~~~~WI~~~~~ 501 (509)
T 2odp_A 474 APRSKVPPPRDFHINLFRMQPWLRQHLG 501 (509)
T ss_dssp CCTTCSSCCCEEEEEGGGCHHHHHHHHT
T ss_pred CcccCCCCCCceeeeHHHHhHHHHHHhC
Confidence 0 466677788888887663
No 130
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=99.21 E-value=1.4e-11 Score=99.63 Aligned_cols=71 Identities=18% Similarity=0.356 Sum_probs=62.2
Q ss_pred CeeeeeeccCccccccccHHHHhhcCCC-----CccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 310 GKYVGFCSLGLSCQTTENVQLRNNFGMR-----SEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 310 g~~~~~~~lGi~~~~~~~~~~~~~~g~~-----~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
|++. ++|||+.++++ ++++++.++++ ....|++|.+|.++|||+++ |++||+|++|||++|.+..++.++|
T Consensus 1 G~v~-~~~lGi~~~~l-~~~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l 77 (112)
T 2p3w_A 1 GSHM-KRFIGIRMRTI-TPSLVDELKASNPDFPEVSSGIYVQEVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAV 77 (112)
T ss_dssp CCCC-EEECCEEEEEC-CHHHHHHHHHHCTTC--CCSSEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHH
T ss_pred CCcc-cceeeEEEecC-CHHHHHHhcccCcCcccCCCCeEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 4566 89999999999 78888888764 23589999999999999999 9999999999999999999998765
No 131
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.18 E-value=3.2e-10 Score=105.80 Aligned_cols=143 Identities=14% Similarity=0.175 Sum_probs=80.5
Q ss_pred HhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecC------CEEEecccccCCC----ceEEEEEcC---C-----
Q 016641 111 LALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPG------KKILTNAHVVADS----TFVLVRKHG---S----- 172 (385)
Q Consensus 111 ~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~------g~ILT~aHvv~~~----~~i~V~~~~---~----- 172 (385)
.++++|++|... ....|+|++|++ .||||||||+.+. ..++|.+.. +
T Consensus 20 ~~~~aV~rl~~~---------------g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~ 84 (268)
T 1arb_A 20 DIIRAVGAYSKS---------------GTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPN 84 (268)
T ss_dssp TGGGGEEEEEET---------------TEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTT
T ss_pred HhhceEEEEEeC---------------CccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCcccccc
Confidence 467789998641 235799999996 6999999999752 245555421 0
Q ss_pred ----C--------cE-EEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEEEEecCCCCCC----------
Q 016641 173 ----P--------TK-YRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN---------- 229 (385)
Q Consensus 173 ----g--------~~-~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~---------- 229 (385)
+ +. ....+......+||||||++.+. + .+..+++.||......
T Consensus 85 ~~~~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v-----~---------~~~~~~vsGWG~t~~~~~~~~~~~~~ 150 (268)
T 1arb_A 85 TPASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA-----N---------PAFNLFWAGWDRRDQNYPGAIAIHHP 150 (268)
T ss_dssp SGGGGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC-----C---------GGGCCEEBCEECCSCCCSCEEEEECG
T ss_pred ccccccccCCcceEEeccceEecCCCCCceEEEEecCCC-----C---------CCCceEEeCcCccCCCCCcceeeccC
Confidence 0 11 22233444567999999998752 1 1223445555322110
Q ss_pred ----ceEEEeeEeecccccccCCCceeeEEEe--c---ccCCCCCCCccee-eCCEEEEEEeeec
Q 016641 230 ----ISVTKGVVSRVEPTQYVHGATQLMAIQI--D---AAINPGNSGGPAI-MGNKVAGVAFQNL 284 (385)
Q Consensus 230 ----~~~~~G~Vs~~~~~~~~~~~~~~~~i~~--d---~~i~~G~SGGPL~-~~G~vVGI~s~~~ 284 (385)
..+....+.... ..+ ........+.. . ...|.|||||||+ .+++++||+++..
T Consensus 151 ~~~l~~i~~~~~~~~~-~~~-~~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 151 NVAEKRISNSTSPTSF-VAW-GGGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp GGCSCEEEEECSCCEE-ECT-TSSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred CcccEEEEeecccccc-ccc-cccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 111111111000 001 00000122332 2 2479999999999 6899999999864
No 132
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.97 E-value=3e-09 Score=88.22 Aligned_cols=86 Identities=15% Similarity=0.101 Sum_probs=61.9
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcC--------CCcEEEEEEEEecC-------CCCeEEEEecCC-ccccc
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHG--------SPTKYRAQVEAVGH-------ECDLAILIVESD-EFWEG 202 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~--------~g~~~~a~v~~~d~-------~~DlAlLkv~~~-~~~~~ 202 (385)
...|.|.+|++.||||+|||+.+ ....|.+.. ..+.+..+-+..++ .+||||||++.+ .+.+.
T Consensus 24 ~~~CgGsLIs~~~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~ 102 (131)
T 1yph_C 24 FHFCGGSLINENWVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQT 102 (131)
T ss_dssp CEEEEEEEEETTEEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBTT
T ss_pred CEEEEEEEeeCCEEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCCc
Confidence 35799999999999999999976 333444321 12344444444443 479999999876 45667
Q ss_pred ceeeecCCcc---cCCCeEEEEecCC
Q 016641 203 MHFLELGDIP---FLQQAVAVVGYPQ 225 (385)
Q Consensus 203 ~~~l~l~~~~---~~G~~V~~iG~p~ 225 (385)
+.|++|+... ..|+.+++.||..
T Consensus 103 v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 103 VSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred CcceECCCcccCCCCCCEEEEEcCCc
Confidence 8999998643 3589999999974
No 133
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.95 E-value=1.1e-08 Score=87.08 Aligned_cols=124 Identities=16% Similarity=0.156 Sum_probs=79.2
Q ss_pred CCCCeEEEEecCC-cccccceeeecCCcc-cCCCeEEEEecCCCCCC----------ceEEEeeEeecccccccCCCcee
Q 016641 185 HECDLAILIVESD-EFWEGMHFLELGDIP-FLQQAVAVVGYPQGGDN----------ISVTKGVVSRVEPTQYVHGATQL 252 (385)
Q Consensus 185 ~~~DlAlLkv~~~-~~~~~~~~l~l~~~~-~~G~~V~~iG~p~~~~~----------~~~~~G~Vs~~~~~~~~~~~~~~ 252 (385)
..+||||||++.+ .+.+.+.|+.|.... ..|+.+++.||...... ..+...+++...+..........
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~ 85 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQEPELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVTE 85 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSCCCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCCT
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCCCCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCCC
Confidence 3689999999876 456679999998654 55999999999653211 12233333332222111111111
Q ss_pred eEEEe-----cccCCCCCCCcceeeCCEEEEEEeee-cC-C-CCceEEEEecchHHHHHHHHHH
Q 016641 253 MAIQI-----DAAINPGNSGGPAIMGNKVAGVAFQN-LS-G-AENIGYIIPVPVIKHFITGVVE 308 (385)
Q Consensus 253 ~~i~~-----d~~i~~G~SGGPL~~~G~vVGI~s~~-~~-~-~~~~~~aip~~~i~~~l~~l~~ 308 (385)
..+.. ....|.|||||||+.+|+++||+++. .. . ....+....+....+|+++..+
T Consensus 86 ~~iCa~~~~~~~~~C~GDsGgPL~~~g~l~Gi~S~g~~~C~~~~~p~vyt~V~~y~~WI~~~~~ 149 (152)
T 2pka_B 86 SMLCAGYLPGGKDTCMGDSGGPLICNGMWQGITSWGHTPCGSANKPSIYTKLIFYLDWIDDTIT 149 (152)
T ss_dssp TEEEEECTTSSCBCCTTCTTCEEEETTEEEEEECCCCSSTTCTTCCEEEEEGGGGHHHHHHHHH
T ss_pred CEEeeccCCCCCcccCCccccceEECCEEEEEEecCCCCCCCCCCCeEEEEHHHHHHHHHHHhc
Confidence 22332 24679999999999779999999986 22 1 1234677778888888877653
No 134
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.86 E-value=1.2e-09 Score=91.76 Aligned_cols=73 Identities=16% Similarity=0.187 Sum_probs=55.0
Q ss_pred cCeeeeeeccCccccccccHH-HHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 309 HGKYVGFCSLGLSCQTTENVQ-LRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 309 ~g~~~~~~~lGi~~~~~~~~~-~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+++. +++||+.++...+.. ..+.+++.+...|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 32 ~~~~~-~~~lG~~i~~g~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l 108 (139)
T 2vz5_A 32 LRQGE-NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRL 108 (139)
T ss_dssp EEETT-EEECSEEEEECTTSCGGGCSSCSSTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cCCCC-cccccEEEEccccCChhhhhhcccCCCCCEEEEEECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 44443 789999985421211 1234555444589999999999999999 9999999999999999 578887765
No 135
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.77 E-value=9.1e-09 Score=81.67 Aligned_cols=68 Identities=18% Similarity=0.192 Sum_probs=50.2
Q ss_pred eeccCccccccccHHHH-hhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChh--hHHhhh
Q 016641 315 FCSLGLSCQTTENVQLR-NNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG--TGSHSM 382 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~-~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~--~l~~~l 382 (385)
+++||+.++.-.+...+ ..++......|++|.+|.++|||+++ |++||+|++|||++|.+.. ++.+.|
T Consensus 18 ~~~lG~~i~g~~~~~~~~~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 89 (104)
T 3sfj_A 18 NLILGFSIGGGIDQDPSQNPFSEDKTDKGIYVTRVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRL 89 (104)
T ss_dssp EEECSEEEEECTTSCGGGCSSCSSTTCCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCcccEEEECccccCccccccccCCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56899998722122111 12333334589999999999999999 9999999999999997755 776654
No 136
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.73 E-value=1.2e-08 Score=78.65 Aligned_cols=42 Identities=24% Similarity=0.322 Sum_probs=39.4
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++| .+..++.++|
T Consensus 28 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 72 (90)
T 2eaq_A 28 PGIFVASVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAM 72 (90)
T ss_dssp TEEEEEEECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 69999999999999999 999999999999999 8999988765
No 137
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.70 E-value=9.3e-07 Score=79.55 Aligned_cols=167 Identities=14% Similarity=0.184 Sum_probs=103.6
Q ss_pred HhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEec-CCEEEecccccCCC-ceEEEEEcCCCcEEEEE-----EEEe
Q 016641 111 LALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIP-GKKILTNAHVVADS-TFVLVRKHGSPTKYRAQ-----VEAV 183 (385)
Q Consensus 111 ~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~-~g~ILT~aHvv~~~-~~i~V~~~~~g~~~~a~-----v~~~ 183 (385)
-+...|.++...... ...+-+-|. ..||+|++|..... ..++|+.. .|. |... -+..
T Consensus 13 ~ia~~iC~l~n~sdg--------------~~~~l~gigyG~~iItn~HLf~rnng~L~I~s~-hG~-f~v~nt~~lki~~ 76 (241)
T 3mmg_A 13 PISACVCLLENSSDG--------------HSERLFGIGFGPYIIANQHLFRRNNGELTIKTM-HGE-FAVANSTQLQMKP 76 (241)
T ss_dssp HHHTTEEEEEEEETT--------------EEEEEEEEEETTEEEECGGGGSSTTCEEEEEET-TEE-EEEEEGGGSCEEE
T ss_pred hhhheEEEEEEEeCC--------------CEEEEEEEeECCEEEEChhhcccCCCeEEEEEC-Cce-EEccCCCceeeEE
Confidence 345667777764421 223333344 78999999999854 56888875 433 2222 2455
Q ss_pred cCCCCeEEEEecCCcccccceeeecC---CcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEeccc
Q 016641 184 GHECDLAILIVESDEFWEGMHFLELG---DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAA 260 (385)
Q Consensus 184 d~~~DlAlLkv~~~~~~~~~~~l~l~---~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~ 260 (385)
-+..||.++|+..+ +||.+-. ..|..||+|.++|..+....... .||.........+ ..+...-..
T Consensus 77 i~g~DiiiIrmPkD-----fpPf~~kl~FR~P~~~E~V~lVg~~fq~k~~~s---~vSesS~i~p~~~---~~fWkHwIs 145 (241)
T 3mmg_A 77 VEGRDIIVIKMAKD-----FPPFPQKLKFRQPTIKDRVCMVSTNFQQKSVSS---LVSESSHIVHKED---TSFWQHWIT 145 (241)
T ss_dssp CTBSSCEEEECCTT-----SCCCCSCCCBCCCCTTCCEEEEEEEECSSCEEE---EEEEEECCEECTT---SSEEEECBC
T ss_pred eCCccEEEEeCCCC-----CCCcchhcccCCCCCCCeEEEEEeecccCCccE---EECCcceeEEcCC---CCEEEEEcC
Confidence 67899999999654 3443322 34577999999998665442121 2333221111111 135677777
Q ss_pred CCCCCCCccee--eCCEEEEEEeeecCCCCceEEEEecch--HHHHHHH
Q 016641 261 INPGNSGGPAI--MGNKVAGVAFQNLSGAENIGYIIPVPV--IKHFITG 305 (385)
Q Consensus 261 i~~G~SGGPL~--~~G~vVGI~s~~~~~~~~~~~aip~~~--i~~~l~~ 305 (385)
...|+-|+||+ .||.+|||++..... ...+|+.|+.. ..++|+.
T Consensus 146 T~~G~CGlPlVs~~Dg~IVGiHsl~~~~-~~~N~F~~f~~~f~~~~L~~ 193 (241)
T 3mmg_A 146 TKDGQAGSPLVSIIDGNILGIHSLTHTT-NGSNYFVEFPEKFVATYLDA 193 (241)
T ss_dssp CCTTCTTCEEEETTTCCEEEEEEEEETT-TCCEEEEECCTTHHHHHTTC
T ss_pred CCCCcCCCeEEEcCCCcEEEEEecccCC-CCcEEEEcCCHHHHHHHhhC
Confidence 78999999999 799999999987543 34567766643 3335544
No 138
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.70 E-value=1.6e-08 Score=80.14 Aligned_cols=66 Identities=20% Similarity=0.191 Sum_probs=46.5
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
+++||+.++... ....+.++++ ...|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 15 ~~~lG~~~~~~~-~~~~~~~~~~-~~~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (103)
T 2fcf_A 15 SKSLGISIVGGR-GMGSRLSNGE-VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 84 (103)
T ss_dssp -CCCCEEEECCC-C--------------EEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCceeEEEEccC-CCCcccccCC-CCCCEEEEEeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 478999987763 3333333443 2479999999999999987 99999999999999998 88888765
No 139
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.67 E-value=1.1e-08 Score=81.54 Aligned_cols=74 Identities=15% Similarity=0.190 Sum_probs=61.0
Q ss_pred chHHHHHHHHHHcCeeeeeeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh
Q 016641 297 PVIKHFITGVVEHGKYVGFCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 297 ~~i~~~l~~l~~~g~~~~~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~ 375 (385)
+.++++.+++.++++.. +.++|+..... .....|++|..+.|.|||+++ |++||+|++|||++|.+.
T Consensus 5 ~~~~~~~~~l~~~~~~~-~~~~g~~~~~~-----------~~~~~G~~V~~~~pas~A~~aGl~~GDvI~~ing~~v~~~ 72 (105)
T 2i4s_A 5 DKVDAIREAIARNPQEI-FQYVRLSQVKR-----------DDKVLGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDP 72 (105)
T ss_dssp HHHHHHHHHHHHSGGGH-HHHEEEEEEEE-----------TTEEEEEEEEECSCTHHHHHHTCCTTCEEEEETTEETTST
T ss_pred HHHHHHHHHHHHCHHHH-HhhceeEEEec-----------CCcEEEEEEecCCCCCHHHHcCCCCCCEEEEECCEECCCH
Confidence 56788899999999887 78888875321 011258889999999999999 999999999999999999
Q ss_pred hhHHhhh
Q 016641 376 GTGSHSM 382 (385)
Q Consensus 376 ~~l~~~l 382 (385)
.++.+++
T Consensus 73 ~d~~~~~ 79 (105)
T 2i4s_A 73 NVMNTLF 79 (105)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9998765
No 140
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.66 E-value=1.2e-08 Score=76.88 Aligned_cols=62 Identities=16% Similarity=0.289 Sum_probs=49.2
Q ss_pred CccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 319 GLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 319 Gi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
|+.+..+ +++..+.+|+... .|++|.+|.++|||+++ |++||+|++|||+++. +..++.+.|
T Consensus 1 G~~~~~~-~~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 66 (81)
T 2rcz_A 1 GSKVTLV-KSRKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLI 66 (81)
T ss_dssp CEEEEEE-CCSTTCCCCEEEE-EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CeEEEEE-ECCCCCCCCEEEe-CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3444444 4555666776532 69999999999999875 9999999999999999 998888665
No 141
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.65 E-value=8.2e-09 Score=83.89 Aligned_cols=69 Identities=20% Similarity=0.281 Sum_probs=54.5
Q ss_pred HcCeeeeeecc----CccccccccHHHHhhcCCCC---ccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHH
Q 016641 308 EHGKYVGFCSL----GLSCQTTENVQLRNNFGMRS---EVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGS 379 (385)
Q Consensus 308 ~~g~~~~~~~l----Gi~~~~~~~~~~~~~~g~~~---~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~ 379 (385)
++|++. ++|+ |+.++... ..+|+.- ...|++|.+|.++|||+++ |++||+|++|||++|.+..++.
T Consensus 8 ~~g~v~-r~~l~~~~~v~l~~~~-----~~lG~~~~~~~~~gv~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~ 81 (117)
T 1uit_A 8 GERRKD-RPYVEEPRHVKVQKGS-----EPLGISIVSGEKGGIYVSKVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQ 81 (117)
T ss_dssp CCCCSC-CCCSCCCEEEEEECSS-----CCCCEEEEECTTSCEEEEEECTTSHHHHHTCCTTCEECEETTEETTTCCHHH
T ss_pred ccCccc-cccCCCCEEEEEEeCC-----CCccEEEEccCCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 477877 8999 88876542 2333311 1369999999999999999 9999999999999999988877
Q ss_pred hhh
Q 016641 380 HSM 382 (385)
Q Consensus 380 ~~l 382 (385)
..+
T Consensus 82 ~~~ 84 (117)
T 1uit_A 82 ARL 84 (117)
T ss_dssp HHH
T ss_pred HHH
Confidence 654
No 142
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.62 E-value=4e-08 Score=80.68 Aligned_cols=66 Identities=20% Similarity=0.191 Sum_probs=48.6
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
+++||+.++.. .....+.++.+ ...|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.++|
T Consensus 35 ~~~lGi~v~~~-~~~~~~~~~~~-~~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 104 (123)
T 2iwq_A 35 SKSLGISIVGG-RGMGSRLSNGE-VMRGIFIKHVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAI 104 (123)
T ss_dssp TSCCSEEEEEC-C---------C-CCCSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCccEEEEec-cCccccccccC-CCCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46899998765 33223323332 2479999999999999986 99999999999999998 88887765
No 143
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=98.55 E-value=9.9e-08 Score=74.34 Aligned_cols=57 Identities=19% Similarity=0.208 Sum_probs=45.3
Q ss_pred eccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..+|+.+..+. . ....|++|.+|.++|||+++ ||+||+|++|||++|.+ ..++.+++
T Consensus 20 ~~~Gf~v~~~~-~---------~~~~g~~V~~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l 79 (94)
T 3kzd_A 20 DTYGFSLSSVE-E---------DGIRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFL 79 (94)
T ss_dssp -CCSEEEEEEC-S---------SSSCEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHH
T ss_pred CCcCEEEEecC-C---------CCcCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35788776652 1 11358999999999999999 99999999999999995 57777654
No 144
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.55 E-value=6.3e-08 Score=76.29 Aligned_cols=51 Identities=24% Similarity=0.318 Sum_probs=43.3
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChh
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~ 376 (385)
.+|||+.+....+ ...|++|.+|.++|||+++ |++||+|++|||++|.+..
T Consensus 21 ~~~lG~~~~~~~~-----------~~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~ 72 (100)
T 2eeh_A 21 AGRLGFSVRGGSE-----------HGLGIFVSKVEEGSSAERAGLCVGDKITEVNGLSLESTT 72 (100)
T ss_dssp SSSCSEEEECCTT-----------TTCCEEEEEECTTSHHHHHTCCSSCEEEEETTEECSSCC
T ss_pred CCCccEEEEcccc-----------CCCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCC
Confidence 4679999876421 1269999999999999999 9999999999999999964
No 145
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.54 E-value=5.5e-08 Score=75.18 Aligned_cols=42 Identities=17% Similarity=0.325 Sum_probs=38.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 71 (91)
T 2vsp_A 27 PGSFIKEVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRI 71 (91)
T ss_dssp SCCBC-CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999999 9999999999999999 888888766
No 146
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.53 E-value=1.2e-07 Score=73.37 Aligned_cols=53 Identities=17% Similarity=0.241 Sum_probs=45.7
Q ss_pred eccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEc-CChhhHHhhh
Q 016641 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI-ANDGTGSHSM 382 (385)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i-~~~~~l~~~l 382 (385)
.+||+.++.- ..|++|.+|.++|||+++ |++||+|++|||++| .+..++.+.|
T Consensus 18 ~~lG~~i~~~--------------~~~v~V~~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l 73 (91)
T 2e7k_A 18 EHLGVTFRVE--------------GGELVIARILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELL 73 (91)
T ss_dssp CCCCEEEEES--------------SSSEEEEEECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHH
T ss_pred CcEeEEEEec--------------CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHH
Confidence 4688877541 268999999999999994 999999999999999 8999988776
No 147
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.53 E-value=8.9e-08 Score=74.82 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=38.7
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 37 ~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 81 (96)
T 2ego_A 37 MVTFVARVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDII 81 (96)
T ss_dssp EEEEEEEECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 99999999999999999 58887765
No 148
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.52 E-value=1.3e-07 Score=74.10 Aligned_cols=42 Identities=24% Similarity=0.442 Sum_probs=39.4
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 33 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 77 (98)
T 2jxo_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAI 77 (98)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 59999999999999999 99999999999999999 88887765
No 149
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.50 E-value=1.6e-07 Score=74.48 Aligned_cols=56 Identities=25% Similarity=0.470 Sum_probs=45.8
Q ss_pred eccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.++|+.+..-. ....|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 27 ~~lG~~~~~~~-----------~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 85 (104)
T 1wi2_A 27 AQLGFNIRGGK-----------ASQLGIFISKVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEIL 85 (104)
T ss_dssp CCCSEEEECCS-----------SSCCCCEEEEECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCccEEEEccc-----------CCCCCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 46788775421 11368999999999999999 99999999999999999 77777654
No 150
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.49 E-value=1.4e-07 Score=72.23 Aligned_cols=42 Identities=24% Similarity=0.435 Sum_probs=39.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 26 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 70 (87)
T 2pa1_A 26 TPIMVTKVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKI 70 (87)
T ss_dssp EEEEEEEECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 99999999999999999 78887765
No 151
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.49 E-value=1.5e-07 Score=72.47 Aligned_cols=42 Identities=19% Similarity=0.319 Sum_probs=39.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 28 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 72 (90)
T 2he4_A 28 PGQYIRSVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASI 72 (90)
T ss_dssp SSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999999 999999999999999998 7877665
No 152
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.47 E-value=1.2e-07 Score=81.83 Aligned_cols=54 Identities=22% Similarity=0.313 Sum_probs=47.0
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhh-HHhhh
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT-GSHSM 382 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~-l~~~l 382 (385)
++|||+.++.. ..|++|.+|.++|||+++ |++||+|++|||++|.+..+ +...+
T Consensus 15 ~~~lG~~~~~~--------------~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~ 70 (166)
T 1w9e_A 15 DGKIGLRLKSI--------------DNGIFVQLVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKV 70 (166)
T ss_dssp TSCCSEEEEEE--------------TTEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCcEeEEEEeC--------------CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 57899998764 169999999999999999 99999999999999999987 55443
No 153
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.47 E-value=1.5e-07 Score=72.65 Aligned_cols=42 Identities=24% Similarity=0.312 Sum_probs=38.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChh--hHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG--TGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~--~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+.. ++.+.+
T Consensus 27 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 71 (91)
T 2pkt_A 27 QPLAISRVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRI 71 (91)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 9999999999999999988 766554
No 154
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=98.46 E-value=1.5e-07 Score=74.19 Aligned_cols=44 Identities=20% Similarity=0.252 Sum_probs=40.3
Q ss_pred cCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
..|++|.+|.++|||++.||+||+|++|||++|.+..++.++|.
T Consensus 6 ~~Gv~V~~V~~~spA~~GL~~GD~I~~Ing~~v~~~~dl~~~l~ 49 (100)
T 3i18_A 6 YDGVYVMSVKDDVPAADVLHAGDLITEIDGNAFKSSQEFIDYIH 49 (100)
T ss_dssp CCCEEEEEECTTSGGGGTCCTTCEEEEETTBCCSSHHHHHHHHH
T ss_pred CCCEEEEEeCCCCchHHCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 37999999999999995599999999999999999999988764
No 155
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.46 E-value=1.5e-07 Score=77.19 Aligned_cols=58 Identities=21% Similarity=0.365 Sum_probs=48.7
Q ss_pred eccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
.+||+.++..... ....|++|.+|.++|||+++ |++||+|++|||++|.+..++.++|
T Consensus 32 ~~lG~~~~~~~~~---------~~~~gv~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l 91 (124)
T 1wh1_A 32 DKLGLTVCYRTDD---------EDDIGIYISEIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALL 91 (124)
T ss_dssp CCCCEEEECCCCC---------SSCCCEEEEEECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHH
T ss_pred CcccEEEEecCCC---------CCCCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 4589888766311 11379999999999999998 9999999999999999999998876
No 156
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.45 E-value=9.7e-08 Score=73.76 Aligned_cols=54 Identities=17% Similarity=0.295 Sum_probs=45.0
Q ss_pred HHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 328 VQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 328 ~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
++.++.+|++.. .|++|.+|.++|||+++ |++||+|++|||+++. +..++.+.|
T Consensus 11 ~~~~~~~g~~~~-~gv~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 68 (92)
T 3cyy_A 11 SAKNEEYGLRLA-SHIFVKEISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLI 68 (92)
T ss_dssp SSTTSCCCEEEE-EEEEEEEECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCCCCCCEEEe-CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 344455666532 69999999999999986 9999999999999999 998888765
No 157
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.44 E-value=2.5e-07 Score=74.22 Aligned_cols=42 Identities=17% Similarity=0.165 Sum_probs=38.4
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ ||+||+|++|||++|. +..++.+.|
T Consensus 44 ~~v~V~~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i 88 (109)
T 2vsv_A 44 APVQVHFLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLL 88 (109)
T ss_dssp SSCEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57899999999999999 9999999999999999 668887665
No 158
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.42 E-value=2.5e-07 Score=72.15 Aligned_cols=62 Identities=15% Similarity=0.277 Sum_probs=46.9
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhh
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHS 381 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~ 381 (385)
..+||+.+..-... ........|++|.+|.++|||+++ |++||+|++|||++|.+..++...
T Consensus 13 ~~glG~~i~~g~~~-----~~~~~~~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~ 75 (97)
T 2w4f_A 13 TGGLGISIAGGKGS-----TPYKGDDEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAV 75 (97)
T ss_dssp TTBSSEEEEECTTS-----CCSBTTBCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCceeEEEECCccC-----CcccCCCCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHH
Confidence 45788887542110 001113479999999999999999 999999999999999998886544
No 159
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=98.42 E-value=5.4e-08 Score=75.49 Aligned_cols=43 Identities=14% Similarity=0.139 Sum_probs=39.8
Q ss_pred CceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 341 TGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
.|++|.+|.++|||++.|++||+|++|||++|.+..++.++|.
T Consensus 1 ~Gv~V~~V~~~spA~~GL~~GD~I~~InG~~v~~~~~l~~~l~ 43 (91)
T 2kjp_A 1 NGIYASSVVENMPAKGKIEVGDKIISADGKNYQSAEKLIDYIS 43 (91)
T ss_dssp CCSSCCCCCCSSCCSSCCCSSCEEEEETTBCCSSHHHHHHHHS
T ss_pred CceEEEEECCCChHHHcCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 3889999999999998999999999999999999999988764
No 160
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=98.41 E-value=1.6e-07 Score=72.01 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=39.2
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
.|++|..+.|+|||+++ ||+||+|++|||++|.+..++.+.+
T Consensus 19 ~G~~V~~~~~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~ 61 (87)
T 2i6v_A 19 LGYRVSPGKDPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLF 61 (87)
T ss_dssp EEEEEEECSCHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHH
T ss_pred EEEEEEeCCCCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 58999999999999999 9999999999999999999998765
No 161
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.41 E-value=3.5e-07 Score=70.62 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=37.0
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.+
T Consensus 24 ~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l 68 (91)
T 2f5y_A 24 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEI 68 (91)
T ss_dssp SSCEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57999999999999999 99999999999999996 46666543
No 162
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.41 E-value=2.4e-07 Score=72.20 Aligned_cols=43 Identities=14% Similarity=0.272 Sum_probs=39.1
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 29 ~~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 74 (96)
T 2v90_A 29 RPGQFLWEVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRI 74 (96)
T ss_dssp CEEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 368999999999999999 99999999999999999 67877655
No 163
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.39 E-value=1.8e-07 Score=70.88 Aligned_cols=42 Identities=17% Similarity=0.178 Sum_probs=38.0
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.+
T Consensus 23 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 67 (83)
T 2kv8_A 23 APCVLSCVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLI 67 (83)
T ss_dssp SSCBCCBCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 999999999999999998 7776554
No 164
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.39 E-value=1.8e-07 Score=72.81 Aligned_cols=42 Identities=26% Similarity=0.422 Sum_probs=38.9
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 30 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 74 (94)
T 1vb7_A 30 TPIIVTKVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKI 74 (94)
T ss_dssp EEEECCCBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999999 999999999999999998 8877655
No 165
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.39 E-value=3.4e-07 Score=70.07 Aligned_cols=42 Identities=12% Similarity=0.269 Sum_probs=37.6
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.+
T Consensus 27 ~~~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~ 71 (88)
T 2uzc_A 27 MPLTISSLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKI 71 (88)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCeEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 999999999999999998 5665443
No 166
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=98.39 E-value=1.4e-07 Score=74.83 Aligned_cols=43 Identities=23% Similarity=0.215 Sum_probs=39.8
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 47 ~~~~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l 92 (104)
T 2z17_A 47 EMFTLICKIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLI 92 (104)
T ss_dssp SCCEEEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHH
T ss_pred CCCeEEEEECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 369999999999999999 9999999999999999 888888765
No 167
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.39 E-value=2.2e-07 Score=72.97 Aligned_cols=42 Identities=14% Similarity=0.035 Sum_probs=38.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+.+|.+|.++|||+++ ||+||+|++|||++|. +..|+.+.+
T Consensus 39 ~~~~I~~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i 83 (101)
T 3qik_A 39 KAVVVKSVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESIL 83 (101)
T ss_dssp TEEEEEEECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHH
Confidence 58899999999999999 9999999999999984 888888765
No 168
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.39 E-value=2.6e-07 Score=71.76 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=38.8
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|..|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 29 ~~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 73 (95)
T 3r68_A 29 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMI 73 (95)
T ss_dssp CSEEEECCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 48999999999999999 999999999999999998 7777665
No 169
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=98.38 E-value=1.6e-07 Score=73.17 Aligned_cols=44 Identities=30% Similarity=0.297 Sum_probs=40.5
Q ss_pred cCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
..|++|.+|.++|||++.|++||+|++|||++|.+..++.++|.
T Consensus 4 ~~Gv~V~~V~~~spA~~GL~~GD~Il~InG~~v~~~~~l~~~l~ 47 (94)
T 2kl1_A 4 AKGVYVMSVLPNMPAAGRLEAGDRIAAIDGQPINTSEQIVSYVR 47 (94)
T ss_dssp CCCEECCCCCTTSTTBTTBCTTCEEEEETTBCCCCHHHHHHHHH
T ss_pred CCcEEEEEECCCChHHhCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 47999999999999998899999999999999999999987763
No 170
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.38 E-value=4.7e-07 Score=69.78 Aligned_cols=42 Identities=17% Similarity=0.261 Sum_probs=37.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.+
T Consensus 27 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 71 (91)
T 1g9o_A 27 LGQYIRLVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRI 71 (91)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999999 99999999999999998 45555443
No 171
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.37 E-value=3.3e-07 Score=71.14 Aligned_cols=38 Identities=26% Similarity=0.355 Sum_probs=35.6
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhH
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTG 378 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l 378 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..++
T Consensus 29 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~ 67 (93)
T 2dls_A 29 RIVLVQSVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL 67 (93)
T ss_dssp SSCEEEEECSSSTTTTTTCCSSCEEEEETTEECSSSCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHH
Confidence 68999999999999999 999999999999999997655
No 172
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.37 E-value=3e-07 Score=69.91 Aligned_cols=41 Identities=24% Similarity=0.378 Sum_probs=36.7
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHS 381 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~ 381 (385)
.|++|.+|.++|||+++ |++||+|++|||+++.+. .++.+.
T Consensus 25 ~~v~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~ 68 (85)
T 1rgw_A 25 MPLTISRITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNK 68 (85)
T ss_dssp SCCBEEEECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHH
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHH
Confidence 58999999999999999 999999999999999997 555443
No 173
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.36 E-value=4.1e-07 Score=72.27 Aligned_cols=42 Identities=24% Similarity=0.294 Sum_probs=38.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChh--hHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG--TGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~--~l~~~l 382 (385)
.|++|..|.++|||+++ |++||+|++|||++|.+.. ++.+.|
T Consensus 26 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 70 (106)
T 3ngh_A 26 DGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELV 70 (106)
T ss_dssp CSCEEECCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999999 9999999999999999987 666544
No 174
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=98.36 E-value=3.7e-07 Score=71.25 Aligned_cols=41 Identities=20% Similarity=0.180 Sum_probs=38.0
Q ss_pred eEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 343 VLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 343 v~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
-+|.+|.++|||+++ |++||+|++|||++|.+..++.++|.
T Consensus 4 p~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~ 45 (95)
T 3id1_A 4 PVVGEIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLV 45 (95)
T ss_dssp CBEEEECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHH
T ss_pred CEEEeeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHH
Confidence 368999999999999 99999999999999999999988763
No 175
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.36 E-value=4.7e-07 Score=70.98 Aligned_cols=42 Identities=19% Similarity=0.181 Sum_probs=37.8
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 34 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 78 (99)
T 3khf_A 34 VHHVVWSVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELL 78 (99)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 37899999999999999 9999999999999999 677776654
No 176
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.35 E-value=3.1e-07 Score=71.04 Aligned_cols=49 Identities=12% Similarity=0.200 Sum_probs=40.3
Q ss_pred hhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 332 NNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 332 ~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
..+|+.. ..| +|.+|.++|||+++ |++||+|++|||++| .+..++.+.|
T Consensus 24 ~~lG~~~-~~G-~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l 75 (90)
T 1y7n_A 24 YQLGFSV-QNG-IICSLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHIL 75 (90)
T ss_dssp SCCCEEE-ETT-EEEEECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHH
T ss_pred cccCeEe-cCC-EEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 3455432 246 89999999999999 999999999999999 5788887765
No 177
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=5.9e-07 Score=72.35 Aligned_cols=42 Identities=19% Similarity=0.302 Sum_probs=38.2
Q ss_pred CceEEEeeCCCCHHhhh-c-CCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-L-KKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L-~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ | ++||+|++|||++|. +..++.+.|
T Consensus 48 ~gv~V~~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l 93 (113)
T 1va8_A 48 DSVIISRIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLL 93 (113)
T ss_dssp SSEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999999 8 999999999999999 667877665
No 178
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.35 E-value=4e-07 Score=73.23 Aligned_cols=42 Identities=24% Similarity=0.258 Sum_probs=39.0
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+++|..|.++|||+++ |++||+|++|||++|. +..|+.+.|
T Consensus 36 ~~v~V~~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i 80 (111)
T 1vae_A 36 TPVQVHFLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLL 80 (111)
T ss_dssp SSCEECCCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57899999999999999 9999999999999999 889988765
No 179
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.34 E-value=5.2e-07 Score=72.18 Aligned_cols=42 Identities=14% Similarity=0.323 Sum_probs=37.8
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHS 381 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~ 381 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+..++...
T Consensus 45 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~ 87 (110)
T 1x5q_A 45 DEGIFISRVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAV 87 (110)
T ss_dssp CCSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHH
Confidence 479999999999999999 999999999999999997665543
No 180
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.34 E-value=4.2e-07 Score=74.59 Aligned_cols=42 Identities=24% Similarity=0.250 Sum_probs=39.2
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|..|.++|||+++ |++||+|++|||++|.+. .++.++|
T Consensus 51 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l 95 (124)
T 3tsv_A 51 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFL 95 (124)
T ss_dssp SCEEEEEECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999999 999999999999999998 7887765
No 181
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.33 E-value=5e-07 Score=69.60 Aligned_cols=39 Identities=26% Similarity=0.234 Sum_probs=35.7
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHH
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGS 379 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~ 379 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..+..
T Consensus 32 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~ 71 (91)
T 1m5z_A 32 KGVYVKNIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCL 71 (91)
T ss_dssp SCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHH
Confidence 69999999999999999 9999999999999999975433
No 182
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.33 E-value=1.8e-07 Score=77.16 Aligned_cols=63 Identities=19% Similarity=0.344 Sum_probs=46.7
Q ss_pred cCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 318 LGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 318 lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
||+.++.. ....++.+|++. ..|++|.+|.++|||+++ |++||+|++|||++| .+..++.+.|
T Consensus 44 lG~~i~~~-~~~~~~~~g~~~-~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 110 (128)
T 1nf3_C 44 LGFYIRDG-SSVRVTPHGLEK-VPGIFISRLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMM 110 (128)
T ss_dssp CCEEEEEE-EEEEEETTEEEE-EEEEEEEEECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHH
T ss_pred ccEEEEcc-ccccccccccCC-CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 66666544 222233344432 368999999999999987 799999999999999 7777777655
No 183
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.33 E-value=5.5e-07 Score=69.10 Aligned_cols=41 Identities=15% Similarity=0.274 Sum_probs=36.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHS 381 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~ 381 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.
T Consensus 27 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~ 70 (89)
T 2q3g_A 27 VPLSISRLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNK 70 (89)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 58999999999999999 99999999999999995 4555543
No 184
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.33 E-value=5e-07 Score=70.85 Aligned_cols=42 Identities=24% Similarity=0.239 Sum_probs=38.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..|+.+.|
T Consensus 36 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l 81 (97)
T 2ejy_A 36 QSCTVARILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAM 81 (97)
T ss_dssp CCEEEEEECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999986 99999999999999996 88888765
No 185
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.32 E-value=6.3e-07 Score=71.63 Aligned_cols=42 Identities=10% Similarity=0.144 Sum_probs=38.4
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|..|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 45 ~gv~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l 89 (109)
T 1q3o_A 45 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMI 89 (109)
T ss_dssp SSEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 999999999999999998 7776554
No 186
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.32 E-value=4.4e-07 Score=71.40 Aligned_cols=42 Identities=19% Similarity=0.274 Sum_probs=37.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 36 ~~~~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l 80 (100)
T 1whd_A 36 SPVRVQAVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEI 80 (100)
T ss_dssp SSCBCCBCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57999999999999999 99999999999999994 57776654
No 187
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.31 E-value=6.5e-07 Score=68.75 Aligned_cols=42 Identities=19% Similarity=0.182 Sum_probs=38.9
Q ss_pred CceEEEeeCCCCHHhh-h-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~-a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+++|.+|.++|||++ + |++||+|++|||+++. +..++.+.|
T Consensus 25 ~~~~I~~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l 70 (88)
T 1kwa_A 25 NHCIVARIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKML 70 (88)
T ss_dssp GGEEEEEECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 5799999999999999 7 9999999999999999 888887765
No 188
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.31 E-value=2.5e-05 Score=69.82 Aligned_cols=171 Identities=16% Similarity=0.183 Sum_probs=102.3
Q ss_pred HHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCC-ceEEEEEcCCCcEEEEE-----EEEe
Q 016641 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS-TFVLVRKHGSPTKYRAQ-----VEAV 183 (385)
Q Consensus 110 ~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~-~~i~V~~~~~g~~~~a~-----v~~~ 183 (385)
.-+.+.|..|...... ....--|+.. ..||+|++|..+.. ..++|+.. .|. |... -+..
T Consensus 20 n~Ia~~ic~l~n~sdg------------~~~~l~gigy-G~~iItn~HLf~~nnG~L~I~s~-hG~-f~v~nt~~lki~~ 84 (229)
T 1lvm_A 20 NPISSTICHLTNESDG------------HTTSLYGIGF-GPFIITNKHLFRRNNGTLLVQSL-HGV-FKVKNTTTLQQHL 84 (229)
T ss_dssp HHHHTTEEEEEEEETT------------EEEEEEEEEE-TTEEEECGGGGGCCSSEEEEEET-TEE-EEESCGGGSEEEE
T ss_pred ChhheEEEEEEeccCC------------ceEEEEEEeE-CCEEEeChhhhccCCCcEEEEeC-CCe-EEeCCCCceeeEE
Confidence 4455677888764421 1111223333 77999999999854 67888764 332 2211 1344
Q ss_pred cCCCCeEEEEecCCcccccceeeecC---CcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEeccc
Q 016641 184 GHECDLAILIVESDEFWEGMHFLELG---DIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAA 260 (385)
Q Consensus 184 d~~~DlAlLkv~~~~~~~~~~~l~l~---~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~ 260 (385)
-+..||.++|+..+ +||.+-. ..+..||+|.++|.-+....... .||.........+. .+...=..
T Consensus 85 i~g~DiiiIrmPkD-----fpPf~~~l~FR~P~~~e~V~lVg~~fq~k~~~s---~vSesS~i~p~~~~---~fWkHwIs 153 (229)
T 1lvm_A 85 IDGRDMIIIRMPKD-----FPPFPQKLKFREPQREERICLVTTNFQTKSMSS---MVSDTSCTFPSSDG---IFWKHWIQ 153 (229)
T ss_dssp CTTSSCEEEECCTT-----SCCCCSCCCBCCCCTTCEEEEEEEECSSSSCEE---EECCCEECEEETTT---TEEEECBC
T ss_pred eCCccEEEEeCCCc-----CCCcccccccCCCCCCCeEEEEEeEeecCCccE---EECCcceeEecCCC---CEeEEEee
Confidence 46899999999864 3333222 35677999999998665442221 22322111111111 22344455
Q ss_pred CCCCCCCccee--eCCEEEEEEeeecCCCCceEEEEecch-HHHHHHHHH
Q 016641 261 INPGNSGGPAI--MGNKVAGVAFQNLSGAENIGYIIPVPV-IKHFITGVV 307 (385)
Q Consensus 261 i~~G~SGGPL~--~~G~vVGI~s~~~~~~~~~~~aip~~~-i~~~l~~l~ 307 (385)
...|+-|.||+ .||.+|||.+..... ...+|+.|+.. +.++|+...
T Consensus 154 T~~G~CGlPlVs~~Dg~IVGiHsl~~~~-~~~NyF~~f~~~f~~~L~~~~ 202 (229)
T 1lvm_A 154 TKDGQCGSPLVSTRDGFIVGIHSASNFT-NTNNYFTSVPKNFMELLTNQE 202 (229)
T ss_dssp CCTTCTTCEEEETTTCCEEEEEEEEETT-SCSEEEEECCTTHHHHHHCGG
T ss_pred CCCCcCCCcEEECCCCcEEEEEcccccC-CCeEEEeCCCHHHHHHHhccc
Confidence 57899999999 899999999986542 34567776644 447776654
No 189
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.31 E-value=2.9e-07 Score=72.86 Aligned_cols=57 Identities=21% Similarity=0.275 Sum_probs=46.5
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..++|+.+..-. +...+++|.+|.++|||+++ |++||+|++|||++|.+ ..++.++|
T Consensus 14 ~~~lG~~l~~g~-----------~~~~~~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 73 (103)
T 1v5l_A 14 PAPWGFRLSGGI-----------DFNQPLVITRITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRI 73 (103)
T ss_dssp SSCCSBCCEEET-----------TTTEEEECSCBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHH
T ss_pred CCCcCEEEeccc-----------cCCCCeEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 356888775321 01248999999999999999 99999999999999999 88888766
No 190
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.30 E-value=7.7e-07 Score=73.15 Aligned_cols=44 Identities=27% Similarity=0.372 Sum_probs=41.0
Q ss_pred cCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
..|++|.+|.++|||+++||+||+|++|||++|.+..++.+.|.
T Consensus 24 ~~gv~V~~V~~~spA~~aL~~GD~Il~InG~~v~~~~dl~~~l~ 67 (125)
T 2hga_A 24 PDGVQIDSVVPGSPASKVLTPGLVIESINGMPTSNLTTYSAALK 67 (125)
T ss_dssp CCCEEEEEECSSSGGGGTSCTTCEEEEETTEECSSHHHHHHHHT
T ss_pred CCceEEEEECCCChHHHhcCCCCEEEEECCEEcCCHHHHHHHHH
Confidence 47999999999999998899999999999999999999988764
No 191
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.28 E-value=5.4e-07 Score=71.09 Aligned_cols=42 Identities=24% Similarity=0.411 Sum_probs=37.7
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 30 ~g~~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 74 (102)
T 2d90_A 30 KGQIIKDIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMI 74 (102)
T ss_dssp SSEEEECCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999999 999999999999999985 5665544
No 192
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.27 E-value=1.7e-06 Score=69.99 Aligned_cols=80 Identities=21% Similarity=0.250 Sum_probs=55.0
Q ss_pred ecchHHHHHHHHHHcCeee-----e--eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEE
Q 016641 295 PVPVIKHFITGVVEHGKYV-----G--FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIIL 365 (385)
Q Consensus 295 p~~~i~~~l~~l~~~g~~~-----~--~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~ 365 (385)
|.+.+...++++....++. . ...||+.+..... ......|++|.+|.++|||+++ |++||+|+
T Consensus 4 ~~~~~~~~~~~~~~~~~~~~v~l~k~~~~~lG~~i~~~~~--------~~~~~~gv~V~~V~~~spA~~aG~l~~GD~Il 75 (117)
T 2o2t_A 4 ACDEFDQLIKNMAQGRHVEVFELLKPPSGGLGFSVVGLRS--------ENRGELGIFVQEIQEGSVAHRDGRLKETDQIL 75 (117)
T ss_dssp -CHHHHHHHHHHHTTSCEEEEEEECCSSSCSSCCEEEEEC--------CC--CEEEEECCCCTTSHHHHHCCCCTTCEEE
T ss_pred chHHHHHHHHhhccCCeEEEEEEEECCCCCCCEEEeeccc--------CCCCCCCEEEEEECCCCHHHHCCCCCCCCEEE
Confidence 3455667777776544332 0 1346777654311 0111369999999999999987 99999999
Q ss_pred EECCEEcC---ChhhHHhhh
Q 016641 366 AFDGVPIA---NDGTGSHSM 382 (385)
Q Consensus 366 ~vng~~i~---~~~~l~~~l 382 (385)
+|||++|. +..++.+.+
T Consensus 76 ~ing~~v~~~~~~~~~~~~l 95 (117)
T 2o2t_A 76 AINGQALDQTITHQQAISIL 95 (117)
T ss_dssp EETTEECCTTSCHHHHHHHH
T ss_pred EECCEECCCCCCHHHHHHHH
Confidence 99999999 777776654
No 193
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=98.27 E-value=5.6e-07 Score=69.34 Aligned_cols=42 Identities=24% Similarity=0.264 Sum_probs=38.1
Q ss_pred ceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 342 GVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 342 Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
.++|.+|.++|||+++ |++||+|++|||++|.+..++.+.|.
T Consensus 5 ~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~ 47 (91)
T 2zpm_A 5 EPVLENVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVR 47 (91)
T ss_dssp -CBCSEECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHH
T ss_pred CeEEEEECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHh
Confidence 3689999999999999 99999999999999999999987663
No 194
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.27 E-value=8.3e-07 Score=70.56 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=38.2
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
..|++|.+|.++|||+ + |++||+|++|||++|.+..++...+
T Consensus 38 ~~gv~V~~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~ 80 (107)
T 2h2b_A 38 ETSIVISDVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQ 80 (107)
T ss_dssp CCCEEEEEECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHH
T ss_pred CCCEEEEEECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHH
Confidence 4699999999999999 8 9999999999999999988776654
No 195
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.26 E-value=5.8e-07 Score=72.48 Aligned_cols=43 Identities=23% Similarity=0.297 Sum_probs=38.3
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 37 ~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 82 (114)
T 2edz_A 37 TDGHLIRVIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELV 82 (114)
T ss_dssp CCSCEEECCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHH
T ss_pred CCCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 379999999999999999 999999999999999985 6666554
No 196
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.26 E-value=8.5e-07 Score=68.86 Aligned_cols=35 Identities=20% Similarity=0.209 Sum_probs=33.6
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~ 375 (385)
.+++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 32 ~~v~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~ 67 (94)
T 2eeg_A 32 APLTISRVHAGSKAALAALCPGDLIQAINGESTELM 67 (94)
T ss_dssp SCCEECCCCSSSHHHHTTCCTTCEEEEETTEETTTC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 68999999999999999 999999999999999985
No 197
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.25 E-value=1e-06 Score=68.64 Aligned_cols=42 Identities=19% Similarity=0.366 Sum_probs=38.8
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 32 ~~~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 77 (97)
T 2jil_A 32 RPVVITSVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSIL 77 (97)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999987 99999999999999999 88887665
No 198
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=7.4e-07 Score=70.13 Aligned_cols=39 Identities=26% Similarity=0.317 Sum_probs=36.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHH
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGS 379 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~ 379 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..+.+
T Consensus 35 ~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~ 74 (101)
T 1uez_A 35 VGIYVSLVEPGSLAEKEGLRVGDQILRVNDKSLARVTHAE 74 (101)
T ss_dssp CCEEEEEECTTSHHHHHTCCSSCCEEEETTEECSSCCHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCcCHHH
Confidence 68999999999999999 9999999999999999988743
No 199
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.24 E-value=1.3e-06 Score=67.80 Aligned_cols=37 Identities=22% Similarity=0.262 Sum_probs=34.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~ 377 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+...
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 67 (95)
T 2vwr_A 29 PGVFILDLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTP 67 (95)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCH
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCH
Confidence 69999999999999987 99999999999999988544
No 200
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.24 E-value=1.6e-06 Score=66.58 Aligned_cols=42 Identities=24% Similarity=0.424 Sum_probs=36.5
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++| .+..++.+.|
T Consensus 27 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 72 (90)
T 2q9v_A 27 EPIYIGHIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLM 72 (90)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57999999999999986 999999999999999 5566666544
No 201
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.24 E-value=1.5e-06 Score=66.01 Aligned_cols=42 Identities=7% Similarity=0.046 Sum_probs=37.1
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 25 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 70 (85)
T 2i04_A 25 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIF 70 (85)
T ss_dssp BCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999986 9999999999999998 457776554
No 202
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.24 E-value=6.5e-07 Score=72.84 Aligned_cols=44 Identities=23% Similarity=0.342 Sum_probs=40.7
Q ss_pred cCceEEEeeCC--CCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhhc
Q 016641 340 VTGVLVNKINP--LSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSML 383 (385)
Q Consensus 340 ~~Gv~V~~V~~--~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l~ 383 (385)
..|++|..|.+ +|||+++ |++||+|++|||++|.+. .++.++|.
T Consensus 43 ~~gv~V~~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~ 91 (118)
T 2yub_A 43 ATTVQVKEVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIK 91 (118)
T ss_dssp CCEEEEEECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHH
T ss_pred CCcEEEEEecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHH
Confidence 37999999999 9999999 999999999999999999 99887763
No 203
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.24 E-value=1.3e-06 Score=71.68 Aligned_cols=42 Identities=24% Similarity=0.442 Sum_probs=39.4
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.++|
T Consensus 33 ~gv~V~~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 77 (128)
T 2kjd_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAI 77 (128)
T ss_dssp CSEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 59999999999999999 99999999999999999 88887765
No 204
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.23 E-value=5.7e-07 Score=80.59 Aligned_cols=59 Identities=20% Similarity=0.104 Sum_probs=49.6
Q ss_pred eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCC-CCEEEEECCEEcCChhhHHhhh
Q 016641 315 FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKK-DDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 315 ~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~-GDiI~~vng~~i~~~~~l~~~l 382 (385)
..++|+.+..+ +++.++ ..|++|.+|.++|||+++ |++ ||+|++|||+ |.+..+|.++|
T Consensus 94 ~~~lGi~~~~~-~~~~~~-------~~Gv~V~~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l 154 (209)
T 3rle_A 94 QGLLGVSIRFC-SFDGAN-------ENVWHVLEVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLI 154 (209)
T ss_dssp SSSSCEEEEEE-ECTTGG-------GSCEEEEEECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHH
T ss_pred cCccceEEeec-ChhHcc-------ccceEEEEeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHH
Confidence 46799998876 332221 269999999999999999 999 9999999998 99999998876
No 205
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=98.22 E-value=0.00025 Score=61.67 Aligned_cols=162 Identities=12% Similarity=0.122 Sum_probs=100.9
Q ss_pred HHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEE-E-ec--
Q 016641 109 IELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVE-A-VG-- 184 (385)
Q Consensus 109 ~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~-~-~d-- 184 (385)
..-+++.++.|.+.. +.-||.-|.+++.|-+.|.-.+ +. |.+ +|+.++..-. . .|
T Consensus 12 ~~l~~~N~~~vtt~~----------------g~ft~LgI~dr~~vvP~Ha~~~-~~--i~i--~g~~~~v~d~~~L~~~~ 70 (187)
T 3qzr_A 12 LSLLRRNVRQVQTDQ----------------GHFTMLGVRDRLAVLPRHSQPG-KT--IWI--EHKLVNVLDAVELVDEQ 70 (187)
T ss_dssp HHHHHHHEEEEEETT----------------EEEEEEEEEBTEEEEEGGGCCC-SE--EEE--TTEEEEEEEEEECCCTT
T ss_pred HHHHHcCeEEEEECC----------------CeEEEEEEeeeEEEEeCCCCCC-CE--EEE--CCEEEEeeeeEEEECCC
Confidence 344556788888721 3458999999999999999443 44 333 5666654211 1 12
Q ss_pred -CCCCeEEEEecCCc-ccccceeeecCCcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCC
Q 016641 185 -HECDLAILIVESDE-FWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAIN 262 (385)
Q Consensus 185 -~~~DlAlLkv~~~~-~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~ 262 (385)
...||++++++..+ |.+-.+. +++.......+..+-+........+..|.+...... ...+......+..+.+..
T Consensus 71 g~~~Elt~v~l~~~~kfRDIrkf--i~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk 147 (187)
T 3qzr_A 71 GVNLALTLITLDTNEKFRDITKF--IPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL-NLSGKPTHRTMMYNFPTK 147 (187)
T ss_dssp CCCCSEEEEEECSSCCBCCCGGG--SCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCC
T ss_pred CCEEEEEEEEcCCCccccchHHh--CccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE-eCCCCccccEEEECCCCC
Confidence 24799999998753 3222222 233322223455555544443334445655544322 222333446788999999
Q ss_pred CCCCCcceeeCCEEEEEEeeecCCCCceEEEEecc
Q 016641 263 PGNSGGPAIMGNKVAGVAFQNLSGAENIGYIIPVP 297 (385)
Q Consensus 263 ~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~aip~~ 297 (385)
.|.-||+|+..|+++||++++ .+..||+.+..
T Consensus 148 ~G~CGgvl~~~gkIiGIHvaG---nG~~G~~a~L~ 179 (187)
T 3qzr_A 148 AGQCGGVVTSVGKIIGIHIGG---NGRQGFCAGLK 179 (187)
T ss_dssp TTCTTCEEEETTEEEEEEEEE---CSSCEEEEECC
T ss_pred CCccCCeEEecCcEEEEEECC---CCCcEEEEEee
Confidence 999999999999999999985 34678887754
No 206
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.22 E-value=1.2e-06 Score=68.42 Aligned_cols=42 Identities=33% Similarity=0.445 Sum_probs=37.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 37 ~g~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 82 (98)
T 1ihj_A 37 TGIFIKGIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLI 82 (98)
T ss_dssp EEEEEEEECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999987 999999999999999997 6666544
No 207
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.22 E-value=8.9e-07 Score=70.56 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=34.4
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhhH
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTG 378 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~l 378 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..+.
T Consensus 25 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~ 64 (106)
T 2la8_A 25 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQ 64 (106)
T ss_dssp SSEEEEECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHH
Confidence 69999999999999986 999999999999999875443
No 208
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.22 E-value=1.3e-06 Score=66.79 Aligned_cols=40 Identities=20% Similarity=0.176 Sum_probs=33.6
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|..| ++|||+ + |++||+|++|||++|.+. .++.+.|
T Consensus 27 ~~~~v~~v-~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l 69 (88)
T 3bpu_A 27 GGQRVKQI-VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDML 69 (88)
T ss_dssp SSEEEEEC-CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CcEEEEEe-cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 68999887 999999 8 999999999999999997 7776654
No 209
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.22 E-value=1.1e-06 Score=69.21 Aligned_cols=42 Identities=12% Similarity=0.110 Sum_probs=38.9
Q ss_pred CceEEEeeCCCCHHhh-h-cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~-a-L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
.+++|.+|.++|||++ + |++||+|++|||++| .+..++.+.|
T Consensus 37 ~~~~V~~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l 82 (101)
T 2yt7_A 37 PTAVIANLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAV 82 (101)
T ss_dssp CCEEEEEECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHH
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4799999999999999 6 999999999999999 8889988776
No 210
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=98.21 E-value=1.6e-06 Score=66.46 Aligned_cols=49 Identities=20% Similarity=0.331 Sum_probs=40.2
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
.+|+.- ..|++|.+|.++|||+++ |++||+|++|||+++ .+..++.+.|
T Consensus 14 ~~G~~~-~~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i 66 (88)
T 3e17_A 14 EYGLRL-GSQIFVKEMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLI 66 (88)
T ss_dssp CCCEEE-EEEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEE-eCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 344432 258999999999999986 999999999999999 6777776654
No 211
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.20 E-value=1.8e-06 Score=68.98 Aligned_cols=43 Identities=12% Similarity=0.243 Sum_probs=38.2
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||+++.+ ..++.+.|
T Consensus 32 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 78 (108)
T 3cbz_A 32 DGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVL 78 (108)
T ss_dssp CCEEEEEEECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHH
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 379999999999999986 99999999999999999 67766554
No 212
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.20 E-value=1.9e-06 Score=69.05 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=38.9
Q ss_pred CceEEEeeCCCCHHhhh-c-CCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-L-KKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L-~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ | ++||+|++|||+++.+ ..++.+.|
T Consensus 26 ~~~~V~~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l 71 (112)
T 1qau_A 26 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVL 71 (112)
T ss_dssp SCEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 8 9999999999999999 88887765
No 213
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.19 E-value=2e-06 Score=68.29 Aligned_cols=42 Identities=21% Similarity=0.247 Sum_probs=37.4
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 43 p~~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l 87 (107)
T 3qe1_A 43 PLQHVSAVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLI 87 (107)
T ss_dssp CCEEEEEECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35679999999999999 9999999999999999 667877655
No 214
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.19 E-value=2.7e-06 Score=69.99 Aligned_cols=78 Identities=19% Similarity=0.235 Sum_probs=54.3
Q ss_pred chHHHHHHHHHHcCeee------e-eeccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEE
Q 016641 297 PVIKHFITGVVEHGKYV------G-FCSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAF 367 (385)
Q Consensus 297 ~~i~~~l~~l~~~g~~~------~-~~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~v 367 (385)
+.....++++.+.+++. + ...|||.+..... ......|++|.+|.++|||+++ |++||+|++|
T Consensus 11 ~~~~~~~~~~~~~~~~~~v~l~k~~~~~lG~~i~g~~~--------~~~~~~gv~V~~V~~~spA~~aG~L~~GD~Il~i 82 (128)
T 2db5_A 11 EDFNSVIQQMAQGRQIEYIDIERPSTGGLGFSVVALRS--------QNLGKVDIFVKDVQPGSVADRDQRLKENDQILAI 82 (128)
T ss_dssp SCHHHHHHHHHTTCEEEEEEEECCSSSCCCCEEEEEEC--------SSSSCEEEEEECCCTTSHHHHTCCCCSSCBEEEE
T ss_pred HhHHHHHHhhcccCceEEEEEEECCCCccCEEEecccC--------CCCCCCCEEEEEECCCCHHHHcCCCCCCCEEEEE
Confidence 44666666666655432 1 1357777643211 1111359999999999999986 9999999999
Q ss_pred CCEEcC---ChhhHHhhh
Q 016641 368 DGVPIA---NDGTGSHSM 382 (385)
Q Consensus 368 ng~~i~---~~~~l~~~l 382 (385)
||++|. +..++.+.|
T Consensus 83 ng~~v~~~~~~~~~~~~l 100 (128)
T 2db5_A 83 NHTPLDQNISHQQAIALL 100 (128)
T ss_dssp SSCBCSTTSCHHHHHHHH
T ss_pred CCEECCCCCCHHHHHHHH
Confidence 999998 777766554
No 215
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.17 E-value=1.8e-06 Score=65.76 Aligned_cols=41 Identities=27% Similarity=0.380 Sum_probs=35.3
Q ss_pred CceEEEeeCCCCHHhh-h-cCCCCEEEEECCEEcCCh--hhHHhh
Q 016641 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIAND--GTGSHS 381 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~-a-L~~GDiI~~vng~~i~~~--~~l~~~ 381 (385)
.|++|.+|.++|||++ + |++||+|++|||+++.+. .++...
T Consensus 28 ~~~~V~~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~ 72 (87)
T 4e34_A 28 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTI 72 (87)
T ss_dssp EEEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 5799999999999999 7 999999999999999655 555443
No 216
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.16 E-value=1.6e-06 Score=67.55 Aligned_cols=38 Identities=18% Similarity=0.194 Sum_probs=34.3
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhhH
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTG 378 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~l 378 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..+.
T Consensus 31 ~gv~V~~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~ 70 (96)
T 2qkv_A 31 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQ 70 (96)
T ss_dssp SSEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHH
T ss_pred CcEEEEEeCCCChHHhcCCCCCCCEEEEECCEECCCCCHH
Confidence 68999999999999986 999999999999999875443
No 217
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.16 E-value=1.4e-06 Score=68.88 Aligned_cols=35 Identities=14% Similarity=0.340 Sum_probs=33.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~ 375 (385)
.+++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 29 ~~v~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~ 64 (103)
T 1wf7_A 29 MPLTISSLKDGGKASQAHVRIGDVVLSIDGISAQGM 64 (103)
T ss_dssp EEEEECCCCTTCHHHHTTCCTTCBEEEETTEECSSC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCC
Confidence 57999999999999999 999999999999999987
No 218
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.16 E-value=2.8e-06 Score=65.99 Aligned_cols=43 Identities=23% Similarity=0.420 Sum_probs=37.1
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.+
T Consensus 32 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 78 (96)
T 1d5g_A 32 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETL 78 (96)
T ss_dssp SSCCEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 369999999999999986 9999999999999999 456665544
No 219
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=6.9e-07 Score=73.40 Aligned_cols=43 Identities=16% Similarity=0.215 Sum_probs=39.5
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 60 ~~gv~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l 105 (126)
T 2yuy_A 60 MDTIFVKQVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALI 105 (126)
T ss_dssp CCCCCBCCCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 368999999999999999 9999999999999998 888887765
No 220
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=97.44 E-value=2.8e-07 Score=74.28 Aligned_cols=42 Identities=26% Similarity=0.385 Sum_probs=36.0
Q ss_pred CceEEEeeCCCCHHhh-h-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~-a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||++ + |++||+|++|||++|. +..++.+.|
T Consensus 53 ~gv~V~~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l 98 (112)
T 2lob_A 53 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTIL 98 (112)
Confidence 5899999999999999 8 9999999999999994 456655443
No 221
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.14 E-value=3.1e-06 Score=65.39 Aligned_cols=42 Identities=14% Similarity=0.243 Sum_probs=38.3
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++| .+..++.+.|
T Consensus 28 ~~~~V~~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 73 (93)
T 3o46_A 28 GAIIVARIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQIL 73 (93)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999986 999999999999999 7888887765
No 222
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=98.14 E-value=2.9e-06 Score=68.48 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=38.5
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++| .+..++.+.|
T Consensus 50 ~~~~V~~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l 95 (114)
T 2gzv_A 50 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 95 (114)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999986 999999999999999 8888888665
No 223
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.14 E-value=3.3e-06 Score=65.31 Aligned_cols=42 Identities=19% Similarity=0.192 Sum_probs=36.1
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHS 381 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~ 381 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.
T Consensus 32 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 77 (94)
T 2fe5_A 32 DNSIYITKIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVAS 77 (94)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 369999999999999986 999999999999999884 454433
No 224
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=2.7e-06 Score=68.95 Aligned_cols=42 Identities=21% Similarity=0.296 Sum_probs=37.1
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.+
T Consensus 53 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 98 (117)
T 2fne_A 53 LPIYVKTVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAIL 98 (117)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999986 9999999999999999 666666544
No 225
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=2.3e-06 Score=67.55 Aligned_cols=42 Identities=21% Similarity=0.349 Sum_probs=36.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 34 ~~~~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 79 (103)
T 1uep_A 34 QPILIGAVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLM 79 (103)
T ss_dssp SCCBEEEECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCeEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999987 99999999999999966 66666554
No 226
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.13 E-value=3.1e-06 Score=65.18 Aligned_cols=35 Identities=34% Similarity=0.366 Sum_probs=33.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
.|++|.+|.++|||+++ |++||+|++|||+++.+.
T Consensus 29 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~ 65 (92)
T 2qg1_A 29 TGVFVSDIVKGGIADADGRLMQGDQILMVNGEDVRNA 65 (92)
T ss_dssp CSCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCC
Confidence 69999999999999987 999999999999999875
No 227
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.13 E-value=2.2e-06 Score=70.44 Aligned_cols=37 Identities=30% Similarity=0.391 Sum_probs=34.8
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~ 377 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..+
T Consensus 46 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~ 83 (128)
T 1uf1_A 46 LGIYITGVDPGSEAEGSGLKVGDQILEVNGRSFLNILH 83 (128)
T ss_dssp CCCEEEEECTTCHHHHHTCCTTCEEEEETTEECSSCCH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCEEEEECCEECCCCCH
Confidence 58999999999999999 99999999999999999755
No 228
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.13 E-value=1.9e-06 Score=68.30 Aligned_cols=40 Identities=20% Similarity=0.333 Sum_probs=35.4
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSH 380 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~ 380 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+
T Consensus 32 ~g~~V~~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~ 74 (106)
T 2eei_A 32 KGVYMTDITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVE 74 (106)
T ss_dssp CSCEECCCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 68999999999999999 999999999999999854 44443
No 229
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.12 E-value=2.7e-06 Score=67.63 Aligned_cols=43 Identities=26% Similarity=0.329 Sum_probs=37.5
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.+
T Consensus 43 ~~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 89 (108)
T 2jre_A 43 ATGIYVKSLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVL 89 (108)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 369999999999999987 99999999999999998 56665543
No 230
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.12 E-value=1.1e-06 Score=70.94 Aligned_cols=55 Identities=22% Similarity=0.246 Sum_probs=44.0
Q ss_pred cCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 318 LGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 318 lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
+|+.+..+. .. + ..|++|.+|.++|||+++ |++||+|++|||++|.+. .++.++|
T Consensus 31 ~G~~v~~~~-~~-----~----~~gv~V~~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l 88 (114)
T 2d8i_A 31 YGFSLSSVE-ED-----G----IRRLYVNSVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFL 88 (114)
T ss_dssp CCCEEEEEE-ET-----T----EEEEEEEECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHH
T ss_pred cCEEEEecC-cC-----C----cCCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHH
Confidence 688776652 10 1 158999999999999999 999999999999999985 5666554
No 231
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.12 E-value=3.5e-06 Score=66.26 Aligned_cols=41 Identities=22% Similarity=0.321 Sum_probs=35.7
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSH 380 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~ 380 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+
T Consensus 33 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 77 (102)
T 2i1n_A 33 DPGIFITKIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVE 77 (102)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 369999999999999987 99999999999999987 444443
No 232
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.12 E-value=3.3e-06 Score=68.98 Aligned_cols=42 Identities=14% Similarity=0.158 Sum_probs=37.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|. +..++.++|
T Consensus 44 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (123)
T 1ueq_A 44 EFLQVKSVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLF 89 (123)
T ss_dssp CCCEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999987 9999999999999998 567777665
No 233
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=98.11 E-value=0.00038 Score=60.41 Aligned_cols=161 Identities=13% Similarity=0.102 Sum_probs=99.4
Q ss_pred HHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEE--EEEecC--
Q 016641 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQ--VEAVGH-- 185 (385)
Q Consensus 110 ~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~--v~~~d~-- 185 (385)
.-+++.++.|.+.. +.-||.-|-+++.|-+.|.-.+ +. |.. +|++++.. ..-.|.
T Consensus 11 sl~k~N~~~vtT~~----------------G~ft~LgI~dr~~vvPtHa~~~-~~--i~i--~G~~~~v~d~~~L~~~~g 69 (191)
T 3q3y_A 11 AMMKRNASTVKTEY----------------GEFTMLGIYDRWAVLPRHAKPG-PT--ILM--NDQEVGVLDAKELVDKDG 69 (191)
T ss_dssp HHHHHHEEEEEETT----------------EEEEEEEEEBTEEEEEGGGCCC-SE--EEE--TTEEEEEEEEEEEECTTC
T ss_pred HHHHcCeEEEEECC----------------CcEEEEEEeceEEEEECCCCCC-CE--EEE--CCEEEEeeeEEEEEcCCC
Confidence 44556788888722 3458888989999999999443 43 333 56666641 111232
Q ss_pred -CCCeEEEEecCCc-ccccceeeecCCcccCCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCC
Q 016641 186 -ECDLAILIVESDE-FWEGMHFLELGDIPFLQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINP 263 (385)
Q Consensus 186 -~~DlAlLkv~~~~-~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~ 263 (385)
..||++|+++..+ |. ++.. -+++.......+..+-+........+..|.+...... ...+......+..+.+...
T Consensus 70 ~~lElt~v~l~~~~kFR-DIrk-fi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i-nlsg~~t~r~l~Y~~pTk~ 146 (191)
T 3q3y_A 70 TNLELTLLKLNRNEKFR-DIRG-FLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL-NLGGTPTKRMLVYNFPTRA 146 (191)
T ss_dssp CEEEEEEEEEECSSCBC-CCGG-GBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-EETTEEEEEEEEEESCCCT
T ss_pred CEEEEEEEECCCCcccc-chHH-hcccccccCCceEEEEEcCCCcceEEEeccEEEcceE-eCCCCcccCEEEecCCCCC
Confidence 3599999998754 32 2222 1233333333344444444443334445655543322 1223334467899999999
Q ss_pred CCCCcceeeCCEEEEEEeeecCCCCceEEEEecc
Q 016641 264 GNSGGPAIMGNKVAGVAFQNLSGAENIGYIIPVP 297 (385)
Q Consensus 264 G~SGGPL~~~G~vVGI~s~~~~~~~~~~~aip~~ 297 (385)
|.-||+|+..|+++||++++ ++..||+.+..
T Consensus 147 G~CGgvL~~~gkIiGIHvgG---nG~~Gfaa~L~ 177 (191)
T 3q3y_A 147 GQCGGVLMSTGKVLGIHVGG---NGHQGFSAALL 177 (191)
T ss_dssp TCTTCEEEETTEEEEEEEEE---ETTEEEEEECC
T ss_pred CccCCEEEeCCCEEEEEECC---CCcceEEeehh
Confidence 99999999999999999985 34678887653
No 234
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.10 E-value=3.9e-06 Score=65.46 Aligned_cols=41 Identities=15% Similarity=0.260 Sum_probs=35.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHS 381 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~ 381 (385)
.|++|.+|.++|||+++ |++||+|++|||+++.+. .++.+.
T Consensus 30 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~ 74 (98)
T 2opg_A 30 GAIIIHEVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINV 74 (98)
T ss_dssp CSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 59999999999999986 999999999999999884 454443
No 235
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.10 E-value=2.8e-06 Score=65.88 Aligned_cols=39 Identities=26% Similarity=0.476 Sum_probs=35.3
Q ss_pred cCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChhhH
Q 016641 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGTG 378 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~~l 378 (385)
..|++|.+|.++|||++.|++||+|++|||++|.+....
T Consensus 34 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~~ 72 (95)
T 1mfg_A 34 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEHG 72 (95)
T ss_dssp CCCEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCBHH
T ss_pred CCCEEEEEECCCCchhhCCCCCCEEEEECCEEcCCCCHH
Confidence 469999999999999999999999999999999985543
No 236
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=98.10 E-value=0.00015 Score=62.96 Aligned_cols=145 Identities=18% Similarity=0.183 Sum_probs=87.4
Q ss_pred eEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEE----EEEEEec-CCCCeEEEEecCCc-ccccceeeecCCcccC
Q 016641 141 TGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYR----AQVEAVG-HECDLAILIVESDE-FWEGMHFLELGDIPFL 214 (385)
Q Consensus 141 ~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~----a~v~~~d-~~~DlAlLkv~~~~-~~~~~~~l~l~~~~~~ 214 (385)
.-||.-|.+.+.|...|...+. .+ .+ +++.+. .++...+ ...||++++++..+ |.+-.+.+ .+....
T Consensus 24 ~~t~LgI~d~~~vvP~Ha~~~~-~i--~i--~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~kfRDIrkfi--~~~~~~ 96 (182)
T 2b0f_A 24 EFTGLGIHDRVCVIPTHAQPGD-DV--LV--NGQKIRVKDKYKLVDPENINLELTVLTLDRNEKFRDIRGFI--SEDLEG 96 (182)
T ss_dssp EEEEEEEEBTEEEEESTTCCCS-EE--EE--TTEEEEEEEEEEEEETTTEEEEEEEEEECCSSCBCCGGGTB--CSSCCC
T ss_pred cEEEEEEeeeEEEEecCCCCcc-EE--EE--CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcccccchHHhc--CCCCCC
Confidence 3488889999999999997763 33 33 444332 2233212 25899999998754 33223332 222211
Q ss_pred CCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecCCCCceEEEE
Q 016641 215 QQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYII 294 (385)
Q Consensus 215 G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~ai 294 (385)
-+.+.++ +-...+...+..|.+....... ..+.....++..+.+...|.-||||+.+|+++||++++ .+..||+.
T Consensus 97 ~~~~lv~-n~~~~p~~~~~vg~~~~~g~i~-l~G~~t~~~~~Y~~pTk~G~CGgvl~~~gkIlGIHvaG---~G~~Gfaa 171 (182)
T 2b0f_A 97 VDATLVV-HSNNFTNTILEVGPVTMAGLIN-LSSTPTNRMIRYDYATKTGQCGGVLCATGKIFGIHVGG---NGRQGFSA 171 (182)
T ss_dssp SEEEEEE-ESSSCEEEEEEEEEEEEEEEEE-ETTEEEEEEEEEESCCCTTCTTCEEEETTEEEEEEEEE---ETTEEEEE
T ss_pred CceEEEE-EcCCCceEEEEecceEEeceEc-CCCcEecceEEeccCCCCcccCCeEEeCCCEEEEEeCC---CCCceEeh
Confidence 2334444 3333221123455544432221 22333446788899999999999999999999999985 45688888
Q ss_pred ecc
Q 016641 295 PVP 297 (385)
Q Consensus 295 p~~ 297 (385)
+..
T Consensus 172 ~l~ 174 (182)
T 2b0f_A 172 QLK 174 (182)
T ss_dssp ECC
T ss_pred hhh
Confidence 653
No 237
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.10 E-value=3.5e-06 Score=65.00 Aligned_cols=42 Identities=19% Similarity=0.389 Sum_probs=36.4
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.+
T Consensus 30 ~~~~V~~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~ 75 (93)
T 2dkr_A 30 SPIYISRVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELL 75 (93)
T ss_dssp CCCEEEEECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999986 99999999999999995 45555443
No 238
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.09 E-value=4.2e-06 Score=67.82 Aligned_cols=43 Identities=16% Similarity=0.174 Sum_probs=37.3
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 53 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 99 (117)
T 2byg_A 53 DNSIYVTKIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAIL 99 (117)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 368999999999999986 9999999999999999 666665544
No 239
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=98.09 E-value=0.00038 Score=60.51 Aligned_cols=147 Identities=9% Similarity=0.097 Sum_probs=88.2
Q ss_pred eEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEE--EEEecC---CCCeEEEEecCCcccccceeeecCCcccCC
Q 016641 141 TGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQ--VEAVGH---ECDLAILIVESDEFWEGMHFLELGDIPFLQ 215 (385)
Q Consensus 141 ~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~--v~~~d~---~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G 215 (385)
..++.-|.+.+.|-..|...+. .+.+ +|+.++.. ..-+|+ ..||+|++++..+-..++.. -+.+.....
T Consensus 24 ~~t~Lgi~~~~~lvP~Ha~~~~---~i~i--~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~kfrDi~k-fip~~~~~~ 97 (180)
T 1cqq_A 24 KFTGLGVYDRFVVVPTHADPGK---EIQV--DGITTKVIDSYDLYNKNGIKLEITVLKLDRNEKFRDIRR-YIPNNEDDY 97 (180)
T ss_dssp EEEEEEEEBTEEEEEGGGCCCS---EEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEECSSCCBCCGGG-GSCSSCCCE
T ss_pred cEEEEEEeeEEEEEccCcCccc---EEEE--CCEEEEeccceEEEcCCCCeEEEEEEEcCCccccCccHh-hcCCCcCCC
Confidence 4788889999999999999874 3333 34444332 223343 36999999987542223322 122222211
Q ss_pred CeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecCCCCceEEEEe
Q 016641 216 QAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYIIP 295 (385)
Q Consensus 216 ~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~aip 295 (385)
..++.+-+-.......+..|.+........ .+......+..+++...|+-||+|+.+|+++||++++ ++..|||.+
T Consensus 98 ~~~~l~~n~~~~~~~~v~~g~~~~~g~i~~-~g~~~~r~l~Y~~pT~~G~CGsvl~~~gkIiGIHvAG---~G~~G~aa~ 173 (180)
T 1cqq_A 98 PNCNLALLANQPEPTIINVGDVVSYGNILL-SGNQTARMLKYSYPTKSGYCGGVLYKIGQVLGIHVGG---NGRDGFSAM 173 (180)
T ss_dssp EEEEEEECTTSSSCEEEEEEEEEECCCEEE-TTEEECSEEEECCCCCTTCTTCEEEETTEEEEEEEEE---CSSCEEEEE
T ss_pred CceEEEEEcCCCceEEEEccceeeeeeEec-CCcEeccEEEecCCCCCCcCCCeEEECCCEEEEEECC---CCCcEEEee
Confidence 223333333323322345555444332211 2223335788999999999999999888999999986 346788876
Q ss_pred cc
Q 016641 296 VP 297 (385)
Q Consensus 296 ~~ 297 (385)
..
T Consensus 174 l~ 175 (180)
T 1cqq_A 174 LL 175 (180)
T ss_dssp CC
T ss_pred ee
Confidence 53
No 240
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.08 E-value=4e-06 Score=68.08 Aligned_cols=43 Identities=21% Similarity=0.294 Sum_probs=38.3
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||+++. +..++.+.|
T Consensus 52 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l 98 (118)
T 3b76_A 52 DLPIYVISVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALL 98 (118)
T ss_dssp CCCEEEEEECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 368999999999999986 9999999999999999 777776654
No 241
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.08 E-value=2.2e-06 Score=69.03 Aligned_cols=41 Identities=29% Similarity=0.246 Sum_probs=37.5
Q ss_pred ceEEEeeCCCCHHhh-h-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 342 GVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 342 Gv~V~~V~~~spA~~-a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
+++|.+|.++|||++ + |++||+|++|||++|.+ ..++.++|
T Consensus 44 ~~~V~~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l 88 (114)
T 1uew_A 44 PHKIGRIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLI 88 (114)
T ss_dssp SCEEEEECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHH
T ss_pred CeEEEEECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 679999999999999 8 99999999999999999 47887765
No 242
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.08 E-value=4.6e-06 Score=65.00 Aligned_cols=42 Identities=14% Similarity=0.218 Sum_probs=36.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 30 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 75 (97)
T 1n7e_A 30 DPIIISSLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLL 75 (97)
T ss_dssp SCCEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999986 99999999999999975 56666544
No 243
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.07 E-value=2.9e-06 Score=67.24 Aligned_cols=43 Identities=23% Similarity=0.427 Sum_probs=37.8
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 83 (105)
T 1wha_A 37 DAGIFVSRIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLL 83 (105)
T ss_dssp CCSCEEEECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 369999999999999987 99999999999999988 66666554
No 244
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.06 E-value=5.1e-06 Score=65.21 Aligned_cols=41 Identities=24% Similarity=0.310 Sum_probs=35.8
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSH 380 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~ 380 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+
T Consensus 36 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~ 80 (101)
T 2jik_A 36 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVD 80 (101)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 369999999999999986 999999999999999885 44443
No 245
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=98.06 E-value=0.00031 Score=61.48 Aligned_cols=146 Identities=12% Similarity=0.146 Sum_probs=86.0
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEE--EEEecC---CCCeEEEEecCCcccccceeeecCCcc-c
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQ--VEAVGH---ECDLAILIVESDEFWEGMHFLELGDIP-F 213 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~--v~~~d~---~~DlAlLkv~~~~~~~~~~~l~l~~~~-~ 213 (385)
+.-||..|.++++|.++|...+ +.+.| +|+.+... ..-.|. ..||++++++..+-..++.. -+.+.. .
T Consensus 23 G~ft~LgI~dr~~lvP~Ha~~~-~ti~i----~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~~kFRDIr~-~~~~~~~~ 96 (190)
T 3zve_A 23 GEFTMLGVHDRVAVIPTHASVG-ETIYI----NDVETKVLDACALRDLTDTNLEITIVKLDRNQKFRDIRH-FLPRYEDD 96 (190)
T ss_dssp EEEEEEEEEBTEEEEEGGGCCC-SEEEE----TTEEEEEEEEEEEECTTCCEEEEEEEEECCSSCBCCCGG-GSCSSCCC
T ss_pred EEEEEEEEeCCEEEEecCCCCC-cEEEE----CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCCcccCchHH-hccccCCC
Confidence 4568888999999999997654 33332 34443321 111232 45999999987532122321 123322 2
Q ss_pred CCCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecCCCCceEEE
Q 016641 214 LQQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYI 293 (385)
Q Consensus 214 ~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~a 293 (385)
..+.+.++=.+.. ....+..|.+...... ...+......+..+.+..+|+-||||+.+|+++||+.++ .+..||+
T Consensus 97 ~~~~~l~i~s~~~-~~~~~~v~~v~~~~~i-~l~g~~~~~~~~Y~~pT~~G~CG~~li~~gkI~GiHvaG---~G~~g~~ 171 (190)
T 3zve_A 97 YNDAVLSVHTSKF-PNMYIPVGQVTNYGFL-NLGGTPTHRILMYNFPTRAGQCGGVVTTTGKVIGIHVGG---NGAQGFA 171 (190)
T ss_dssp EEEEEEEECSSSC-SSEEEEEEEEEEEEEE-EETTEEEEEEEEESSCCCTTCTTCEEEETTEEEEEEEEE---CSSCEEE
T ss_pred CCCeEEEEECCCC-cceEEecccceEecee-ecCCCeeeeeEEEecCCCCCccCCeEEECCCEEEEEECc---CCCceEe
Confidence 2344444433322 2223344444433322 122334446788899999999999999999999999986 3456888
Q ss_pred Eec
Q 016641 294 IPV 296 (385)
Q Consensus 294 ip~ 296 (385)
.++
T Consensus 172 ~~l 174 (190)
T 3zve_A 172 AML 174 (190)
T ss_dssp EEC
T ss_pred hhh
Confidence 765
No 246
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=98.06 E-value=3.5e-06 Score=69.81 Aligned_cols=41 Identities=10% Similarity=0.154 Sum_probs=35.8
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHS 381 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~ 381 (385)
.|++|.+|.++|||+++ ||+||+|++|||++|.+ ..++.+.
T Consensus 65 ~gv~V~~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~ 108 (132)
T 3l4f_D 65 ALQYLESVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNM 108 (132)
T ss_dssp CSEEEEEECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 58999999999999999 99999999999999985 4454443
No 247
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.05 E-value=2.7e-06 Score=76.18 Aligned_cols=43 Identities=21% Similarity=0.344 Sum_probs=39.7
Q ss_pred cCceEEEeeCCCCHHhhh-cCCC-CEEEEECCEEcCChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKD-DIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~G-DiI~~vng~~i~~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ ||+| |+|++|||++|.+..++...+
T Consensus 15 ~~G~~V~~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~ 59 (209)
T 3rle_A 15 TEGYHVLRVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDL 59 (209)
T ss_dssp SEEEEEEEECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHH
T ss_pred CCEEEEEEECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHH
Confidence 479999999999999999 9999 999999999999999887654
No 248
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.05 E-value=3.9e-06 Score=67.46 Aligned_cols=37 Identities=27% Similarity=0.486 Sum_probs=35.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~ 377 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..+
T Consensus 41 ~gv~V~~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~ 78 (114)
T 1x5n_A 41 PGIFISHVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDH 78 (114)
T ss_dssp CSEEEEEECTTSTTTTTTCCTTCEEEEETTEETTSCCT
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCH
Confidence 69999999999999999 99999999999999999864
No 249
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.05 E-value=5.6e-06 Score=66.11 Aligned_cols=42 Identities=24% Similarity=0.318 Sum_probs=36.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 39 ~g~~V~~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 84 (111)
T 2koj_A 39 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLL 84 (111)
T ss_dssp SCEEEEEECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred cCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999987 99999999999999966 46766544
No 250
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.04 E-value=3.6e-06 Score=64.63 Aligned_cols=35 Identities=26% Similarity=0.310 Sum_probs=32.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 30 ~g~~V~~V~~~spA~~aggl~~GD~I~~ing~~v~~~ 66 (90)
T 1qav_A 30 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSA 66 (90)
T ss_dssp EEEEEEEECTTSHHHHTTCCCTTEEEEEETTEECTTC
T ss_pred CCEEEEEECCCCHHHhcCCCCCCCEEEEECCEECCCC
Confidence 58999999999999986 999999999999999875
No 251
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.04 E-value=5.6e-06 Score=67.45 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=37.2
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 58 ~gv~V~~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l 103 (121)
T 2kom_A 58 APIYVKNILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLL 103 (121)
T ss_dssp CCEEEEEECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 68999999999999987 99999999999999988 46766544
No 252
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.04 E-value=4.1e-06 Score=67.84 Aligned_cols=42 Identities=21% Similarity=0.356 Sum_probs=37.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEc--CChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPI--ANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i--~~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++| .+..++.+.|
T Consensus 42 ~~~~V~~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l 87 (117)
T 1v62_A 42 SVITIDRIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLL 87 (117)
T ss_dssp CEEEEEECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 35999999999999996 999999999999999 6788887765
No 253
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.04 E-value=4.4e-06 Score=68.14 Aligned_cols=42 Identities=21% Similarity=0.342 Sum_probs=38.5
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++|.+ ..++.++|
T Consensus 45 ~~~~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l 90 (122)
T 1v5q_A 45 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLL 90 (122)
T ss_dssp SCCEEEEECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHH
T ss_pred CCcEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 56999999999999997 99999999999999988 88888765
No 254
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.03 E-value=4.1e-06 Score=66.60 Aligned_cols=42 Identities=24% Similarity=0.408 Sum_probs=36.2
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHS 381 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~ 381 (385)
..|++|.+|.++|||+++ |++||+|++|||++|. +..++...
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~ 86 (108)
T 1q7x_A 41 HGGIYVKAVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVET 86 (108)
T ss_dssp SCCCBEEEECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHH
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 369999999999999987 9999999999999998 55555444
No 255
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.03 E-value=3.9e-06 Score=69.02 Aligned_cols=43 Identities=28% Similarity=0.398 Sum_probs=39.0
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 45 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 91 (129)
T 2dmz_A 45 ASGIYVKSVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVL 91 (129)
T ss_dssp CCEEEEEEECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 379999999999999986 99999999999999999 78877665
No 256
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.03 E-value=5.3e-06 Score=65.47 Aligned_cols=40 Identities=18% Similarity=0.199 Sum_probs=35.3
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSH 380 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~ 380 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+
T Consensus 38 ~~v~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~ 81 (104)
T 2djt_A 38 TPLAVRGLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVE 81 (104)
T ss_dssp CCCEEEEECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHH
Confidence 68999999999999986 999999999999999884 44443
No 257
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.02 E-value=5.4e-06 Score=65.62 Aligned_cols=36 Identities=28% Similarity=0.324 Sum_probs=33.3
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~ 376 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..
T Consensus 33 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~ 70 (105)
T 2awx_A 33 NSIYVTKIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVT 70 (105)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCB
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCC
Confidence 69999999999999986 9999999999999998743
No 258
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.02 E-value=4.3e-06 Score=67.77 Aligned_cols=43 Identities=14% Similarity=0.236 Sum_probs=36.7
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.+
T Consensus 41 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 87 (119)
T 1x6d_A 41 NKVITVHRVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAIL 87 (119)
T ss_dssp CSSCEEEEECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHH
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 368999999999999986 9999999999999998 455555443
No 259
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.02 E-value=6e-06 Score=67.05 Aligned_cols=42 Identities=24% Similarity=0.260 Sum_probs=36.5
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChh--hHHhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDG--TGSHS 381 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~--~l~~~ 381 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+.. ++.+.
T Consensus 46 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~ 91 (120)
T 2eno_A 46 DSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDL 91 (120)
T ss_dssp CCSEEEEEECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHH
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 469999999999999986 9999999999999999965 44433
No 260
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.01 E-value=5.4e-06 Score=65.45 Aligned_cols=41 Identities=27% Similarity=0.383 Sum_probs=35.3
Q ss_pred CceEEEeeCCCCHHhh-h-cCCCCEEEEECCEEcCC--hhhHHhh
Q 016641 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIAN--DGTGSHS 381 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~-a-L~~GDiI~~vng~~i~~--~~~l~~~ 381 (385)
.|++|.+|.++|||++ + |++||+|++|||++|.+ ..++.+.
T Consensus 35 ~~~~V~~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~ 79 (103)
T 2dc2_A 35 VPILISEIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTI 79 (103)
T ss_dssp EEEEEEEECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHH
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 4899999999999999 6 99999999999999976 4554443
No 261
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.00 E-value=8.3e-06 Score=64.77 Aligned_cols=36 Identities=28% Similarity=0.306 Sum_probs=33.0
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 31 ~~gv~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~ 68 (106)
T 4amh_A 31 DNSIYVTKIIEGGAAHKDGKLQIGDKLLAVNNVALEEV 68 (106)
T ss_dssp BCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSC
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCC
Confidence 369999999999999986 999999999999999763
No 262
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.00 E-value=7.6e-06 Score=64.82 Aligned_cols=36 Identities=22% Similarity=0.254 Sum_probs=33.2
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 37 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~ing~~v~~~ 74 (106)
T 3axa_A 37 KLGIYVKSVVKGGAADVDGRLAAGDQLLSVDGRSLVGL 74 (106)
T ss_dssp SEEEEEEEEBTTSHHHHHCCCCTTCEEEEETTEECTTC
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCC
Confidence 469999999999999987 999999999999999853
No 263
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.00 E-value=5.3e-06 Score=65.12 Aligned_cols=35 Identities=20% Similarity=0.334 Sum_probs=33.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
.+++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 35 ~~v~V~~V~~~spA~~agGL~~GD~I~~ing~~v~~~ 71 (100)
T 2edp_A 35 EPLTVSKIEDGGKAALSQKMRTGDELVNINGTPLYGS 71 (100)
T ss_dssp EEEEECCCCTTSHHHHHTSCCTTCEEEEETTEECCSC
T ss_pred CCeEEEEECCCCHHHHcCCCCCCCEEEEECCEEccch
Confidence 57999999999999997 999999999999999985
No 264
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.99 E-value=4.9e-06 Score=67.05 Aligned_cols=42 Identities=19% Similarity=0.307 Sum_probs=36.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.+
T Consensus 43 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l 88 (116)
T 2dm8_A 43 NAIVIHEVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITAL 88 (116)
T ss_dssp SSEECCCCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHH
T ss_pred CCEEEEEECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 59999999999999986 99999999999999988 56665443
No 265
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.98 E-value=0.00051 Score=59.85 Aligned_cols=147 Identities=10% Similarity=0.111 Sum_probs=86.6
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEE--EEecC---CCCeEEEEecCCcccccceeeecCCcccC
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQV--EAVGH---ECDLAILIVESDEFWEGMHFLELGDIPFL 214 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v--~~~d~---~~DlAlLkv~~~~~~~~~~~l~l~~~~~~ 214 (385)
+.-||.-|-+++.|-..|.-.+ +.+. + +|+.++..- .-.|. +.||++++++..+-..++.. -+.+....
T Consensus 30 G~ft~LgI~d~~~viP~Ha~p~-~~i~--i--~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~kFRDIr~-fi~~~~~~ 103 (190)
T 4dcd_A 30 GEFTMLGVHDNVAILPTHASPG-ESIV--I--DGKEVEILDAKALEDQAGTNLEITIITLKRNEKFRDIRP-HIPTQITE 103 (190)
T ss_dssp EEEEEEEEEBTEEEEEGGGCCC-SEEE--E--TTEEEEEEEEEEEECTTCCEEEEEEEEESSSCCBCCCGG-GSCSSCCC
T ss_pred eEEEEEEEECcEEEEeCCCCCC-cEEE--E--CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCccccchhH-hccccCCC
Confidence 4578999999999999995433 3333 3 455544421 12232 36999999988642222322 12222222
Q ss_pred CCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecCCCCceEEEE
Q 016641 215 QQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYII 294 (385)
Q Consensus 215 G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~ai 294 (385)
..++..+=+........+..|.+........ .+......+..+.+..+|.-||||+.+|+++||+.++ .+..||+.
T Consensus 104 ~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~l-sg~~t~r~l~Y~~pT~~G~CGg~l~~~gkIlGIHvaG---~G~~G~aa 179 (190)
T 4dcd_A 104 TNDGVLIVNTSKYPNMYVPVGAVTEQGYLNL-GGRQTARTLMYNFPTRAGQCGGVITCTGKVIGMHVGG---NGSHGFAA 179 (190)
T ss_dssp EEEEEEEECSSSSTTEEEEEEEEEEEEEEEE-TTEEEEEEEEESSCCCTTCTTCEEEETTEEEEEEEEE---CSSCEEEE
T ss_pred CCceEEEEecCCCccEEEEeeeeEEeccccC-CCCcccceEEEccCCCCCccCCEEEeCCCEEEEEECC---CCCceEee
Confidence 2233332222222222344444444333221 2334446788999999999999999999999999986 34668887
Q ss_pred ec
Q 016641 295 PV 296 (385)
Q Consensus 295 p~ 296 (385)
+.
T Consensus 180 ~L 181 (190)
T 4dcd_A 180 AL 181 (190)
T ss_dssp EC
T ss_pred eh
Confidence 65
No 266
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=97.98 E-value=7.1e-06 Score=67.84 Aligned_cols=42 Identities=17% Similarity=0.243 Sum_probs=37.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.++|
T Consensus 65 ~gv~V~~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 110 (131)
T 1wfg_A 65 LCAFITKVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNII 110 (131)
T ss_dssp EEEEEEEECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999986 999999999999999764 6766654
No 267
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.98 E-value=5.5e-06 Score=66.23 Aligned_cols=42 Identities=26% Similarity=0.353 Sum_probs=36.6
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 38 ~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 83 (111)
T 2dlu_A 38 SGVVVRTIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVL 83 (111)
T ss_dssp SSBEEEEECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999986 99999999999999985 46665543
No 268
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.97 E-value=0.00039 Score=62.10 Aligned_cols=174 Identities=16% Similarity=0.179 Sum_probs=98.0
Q ss_pred HHHHHHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCC---ceE--EEEEcCCCcEEEEE-
Q 016641 106 YAAIELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADS---TFV--LVRKHGSPTKYRAQ- 179 (385)
Q Consensus 106 ~~~~~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~---~~i--~V~~~~~g~~~~a~- 179 (385)
.++...+.+-.|+|.....+ ......++|..|.++++|...|..... ..+ .+.. +|+.|...
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~----------~~~~~~~t~LgI~~r~~lvP~H~~~~~~~~~~~~~~i~i--~g~~~~~~~ 70 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKN----------GSVRWVMNALGVKDDWLLVPSHAYKFEKDYEMMEFYFNR--GGTYYSISA 70 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETT----------SCCEEEEEEEEEEBTEEEEEGGGTTTSTTGGGEEEEEEE--TTEEEEEEG
T ss_pred eeehhhhhccEEEEEEeCCC----------CCcceEEEEEEEcCCEEEEecccCcccccccccceEEEE--CCEEEeecc
Confidence 34556777788998886422 223347899999999999999997522 122 3444 55655443
Q ss_pred ----EEEec-CCCCeEEEEecCC-cccccceee-ecCCcccCCC-eEEEEecCCCCCCceEEEe------eEeecccccc
Q 016641 180 ----VEAVG-HECDLAILIVESD-EFWEGMHFL-ELGDIPFLQQ-AVAVVGYPQGGDNISVTKG------VVSRVEPTQY 245 (385)
Q Consensus 180 ----v~~~d-~~~DlAlLkv~~~-~~~~~~~~l-~l~~~~~~G~-~V~~iG~p~~~~~~~~~~G------~Vs~~~~~~~ 245 (385)
+...| ...||++++++.. .|.+-.+.+ +-.+.+..++ .+.+++...+.. .....+ .++... ..
T Consensus 71 ~~v~~~~~d~~~~Dl~lv~Lp~~~~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~-~~~~~~~~~~~~~~~~~~--i~ 147 (212)
T 2hal_A 71 GNVVIQSLDVGFQDVVLMKVPTIPKFRDITQHFIKKGDVPRALNRLATLVTTVNGTP-MLISEGPLKMEEKATYVH--KK 147 (212)
T ss_dssp GGSEEECSSSSCCSEEEEECTTSCCBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEE-EEEEECSCEEEEEEEEEE--EC
T ss_pred ccceeEeccCCCceEEEEECCCCCccCChhHhcCCcccccccccceEEEEeccCCCc-eEEecccccccceeeEEE--ec
Confidence 33333 4689999999763 332222211 1011122233 333332211111 011111 111000 00
Q ss_pred cCCCcee----eEEEecccCCCCCCCccee-e----CCEEEEEEeeecCCCCceEEEEecc
Q 016641 246 VHGATQL----MAIQIDAAINPGNSGGPAI-M----GNKVAGVAFQNLSGAENIGYIIPVP 297 (385)
Q Consensus 246 ~~~~~~~----~~i~~d~~i~~G~SGGPL~-~----~G~vVGI~s~~~~~~~~~~~aip~~ 297 (385)
..+.... ..+..+.+..+|+-||||+ . .|+++||+.++. .+.|||.++.
T Consensus 148 ~~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~---g~~G~a~~lt 205 (212)
T 2hal_A 148 NDGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG---NSILVAKLVT 205 (212)
T ss_dssp TTSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE---TTEEEEEECC
T ss_pred CCCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC---CCcEEEEeec
Confidence 1111121 4678889999999999999 4 799999999863 3578888764
No 269
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=97.97 E-value=3e-06 Score=69.53 Aligned_cols=42 Identities=21% Similarity=0.347 Sum_probs=39.0
Q ss_pred CceEEEeeCCCCHHhhh-c-CCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-L-KKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L-~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ | ++||+|++|||++|.+ ..++.+.|
T Consensus 33 ~~~~V~~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l 78 (127)
T 1b8q_A 33 PPVIISDLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVL 78 (127)
T ss_dssp SCEEECCCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 8 9999999999999999 88887765
No 270
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.97 E-value=6e-06 Score=65.90 Aligned_cols=36 Identities=25% Similarity=0.312 Sum_probs=33.1
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 35 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~ 72 (110)
T 1um1_A 35 APGLYIQTLLPGSPAAADGRLSLGDRILEVNGSSLLGL 72 (110)
T ss_dssp CSSEEEEEECTTSHHHHHSCCCTTCEEEEESSCBCSSC
T ss_pred CCCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 369999999999999986 999999999999999863
No 271
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.97 E-value=4.6e-06 Score=66.24 Aligned_cols=38 Identities=18% Similarity=0.349 Sum_probs=34.2
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~ 377 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+...
T Consensus 39 ~~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~ 78 (107)
T 1wf8_A 39 KLGIFVKTVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQ 78 (107)
T ss_dssp EEEEEEEEECTTCHHHHHCSSCTTCBEEEETTEECBSCCH
T ss_pred CCCEEEEEeCCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 369999999999999987 99999999999999986443
No 272
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=97.97 E-value=6.2e-06 Score=64.96 Aligned_cols=38 Identities=29% Similarity=0.401 Sum_probs=33.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhhH
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTG 378 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~l 378 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+....
T Consensus 35 ~gv~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~ 74 (104)
T 3i4w_A 35 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHE 74 (104)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTEEEEEETTEECTTCCHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHH
Confidence 49999999999999987 999999999999999665443
No 273
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.97 E-value=3.4e-06 Score=67.52 Aligned_cols=43 Identities=16% Similarity=0.312 Sum_probs=37.4
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.+
T Consensus 43 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 89 (111)
T 1uju_A 43 DEGIFISKVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLL 89 (111)
T ss_dssp CCCCEEEEECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 479999999999999987 9999999999999999 566665544
No 274
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.96 E-value=8.1e-06 Score=64.79 Aligned_cols=37 Identities=24% Similarity=0.351 Sum_probs=33.8
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~ 376 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+..
T Consensus 40 ~~gv~V~~V~~~spA~~aggL~~GD~Il~vng~~v~~~~ 78 (107)
T 1uhp_A 40 SEGIFVSKIVDSGPAAKEGGLQIHDRIIEVNGRDLSRAT 78 (107)
T ss_dssp SCCCEEEEECSSSHHHHTTCCCSSCEEEEETTEECTTCC
T ss_pred CCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 379999999999999987 9999999999999997643
No 275
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=97.96 E-value=6.4e-06 Score=66.71 Aligned_cols=40 Identities=28% Similarity=0.376 Sum_probs=35.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhhHHh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTGSH 380 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~l~~ 380 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..+...
T Consensus 38 ~gv~V~~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~ 79 (119)
T 1tp5_A 38 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQA 79 (119)
T ss_dssp CCEEEEEECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHH
Confidence 69999999999999986 99999999999999998765443
No 276
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.95 E-value=1e-05 Score=65.46 Aligned_cols=42 Identities=21% Similarity=0.411 Sum_probs=36.2
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 49 ~g~~V~~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 94 (117)
T 1ujd_A 49 IGAYIAKILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSII 94 (117)
T ss_dssp EEEEEEEECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred cCEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 48999999999999986 999999999999999874 5555543
No 277
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.95 E-value=7.3e-06 Score=65.24 Aligned_cols=43 Identities=9% Similarity=0.085 Sum_probs=36.9
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 43 ~~g~~V~~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 89 (108)
T 2d92_A 43 RSVIVIRSLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEIL 89 (108)
T ss_dssp CEEEEEEEECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHH
T ss_pred CCCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 368999999999999986 99999999999999966 55665544
No 278
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=97.94 E-value=1.2e-05 Score=64.52 Aligned_cols=35 Identities=20% Similarity=0.238 Sum_probs=32.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 49 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~ 85 (112)
T 2r4h_A 49 MDLYVLRLAEDGPAERSGKMRIGDEILEINGETTKNM 85 (112)
T ss_dssp CCEEEEEECTTSHHHHTTCCCTTCEEEEETTEECTTC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 68999999999999986 999999999999999875
No 279
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=97.94 E-value=1e-05 Score=66.66 Aligned_cols=42 Identities=7% Similarity=0.045 Sum_probs=36.8
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.++|
T Consensus 43 ~~v~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l 88 (129)
T 2kpk_A 43 EFLQIKSLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIF 88 (129)
T ss_dssp EEEEEEEECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 57999999999999986 99999999999999985 56766554
No 280
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=97.93 E-value=6.5e-06 Score=66.02 Aligned_cols=38 Identities=18% Similarity=0.394 Sum_probs=34.2
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~ 377 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+...
T Consensus 34 ~~g~~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~ 73 (113)
T 2g5m_B 34 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQ 73 (113)
T ss_dssp CEEEEEEECCTTSHHHHHTCSCTTCBEEEETTEECSSCCH
T ss_pred CCCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCH
Confidence 469999999999999986 99999999999999987443
No 281
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.93 E-value=7.2e-06 Score=64.47 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=32.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 36 ~~~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~ 72 (103)
T 1wfv_A 36 MDLYVLRLAEDGPAIRNGRMRVGDQIIEINGESTRDM 72 (103)
T ss_dssp EEEECCCBCTTSHHHHHCSSCTTCEEEEETTEECSSC
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCC
Confidence 48999999999999986 999999999999999985
No 282
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=97.92 E-value=5e-06 Score=65.52 Aligned_cols=38 Identities=24% Similarity=0.431 Sum_probs=34.7
Q ss_pred cCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChhh
Q 016641 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~~ 377 (385)
..|++|.+|.++|||++.|++||+|++|||++|.+...
T Consensus 42 ~~gv~V~~V~~~spA~~gL~~GD~I~~vng~~v~~~~~ 79 (103)
T 1n7t_A 42 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEH 79 (103)
T ss_dssp CCSEECCCBSSSSTTSSSCCTTCEEEEETTEECSSCCH
T ss_pred CCCEEEEEECCCCchHHCCCCCCEEEEECCEECCCCCH
Confidence 47999999999999999999999999999999988543
No 283
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=97.91 E-value=1.4e-05 Score=61.89 Aligned_cols=53 Identities=23% Similarity=0.271 Sum_probs=40.2
Q ss_pred eccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
..||+.+....... . ....|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 15 ~~lG~~i~~~~~~~----~---~~~~~~~V~~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~ 69 (97)
T 2iwn_A 15 QGLGITIAGYIGDK----K---LEPSGIFVKSITKSSAVEHDGRIQIGDQIIAVDGTNLQGF 69 (97)
T ss_dssp TBSCEEEECCCCC-----------CCCCEEEEECTTCHHHHHCCCCTTCEEEEETTEECTTS
T ss_pred CCCcEEEEccCCCC----C---CCCCCEEEEEeCCCChHHhCCCCCCCCEEEEECCEECCCC
Confidence 45788775431110 0 12369999999999999986 999999999999999975
No 284
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=97.90 E-value=1.3e-05 Score=65.10 Aligned_cols=35 Identities=17% Similarity=0.292 Sum_probs=32.8
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 53 ~~~~V~~V~~~spA~~aggL~~GD~Il~VnG~~v~~~ 89 (120)
T 2iwo_A 53 VPIFIAMMHPTGVAAQTQKLRVGDRIVTICGTSTEGM 89 (120)
T ss_dssp EEEEEEEECTTSHHHHHTCCCTTCEEEEETTEECTTC
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCC
Confidence 58999999999999975 999999999999999885
No 285
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.90 E-value=5.4e-06 Score=68.12 Aligned_cols=42 Identities=7% Similarity=0.041 Sum_probs=38.4
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++|. +..|+.++|
T Consensus 49 ~~v~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l 94 (126)
T 1wif_A 49 PYLQISHLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLL 94 (126)
T ss_dssp TEEEECCCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHH
T ss_pred CcEEEEEECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHH
Confidence 57999999999999987 9999999999999995 788888776
No 286
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.89 E-value=1.5e-05 Score=65.06 Aligned_cols=42 Identities=12% Similarity=0.071 Sum_probs=36.5
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.+++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 45 ~~~~V~~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l 90 (125)
T 3hpk_A 45 PCLYIVQVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMI 90 (125)
T ss_dssp SSEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999987 9999999999999998 556665544
No 287
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.89 E-value=8.7e-06 Score=65.76 Aligned_cols=37 Identities=19% Similarity=0.368 Sum_probs=33.4
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~ 377 (385)
..|++|.+|.++|||+ + |++||+|++|||++|.+...
T Consensus 45 ~~gv~V~~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~ 82 (117)
T 2csj_A 45 ETSIVISDVLPGGPAD-GLLQENDRVVMVNGTPMEDVLH 82 (117)
T ss_dssp CCBCEEEEECTTSSHH-HHBCTTCEEEEESSCBCBTCCH
T ss_pred CCCEEEEEECCCCccc-ccCCCCCEEEEECCEECCCcCH
Confidence 3689999999999997 7 99999999999999988643
No 288
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.89 E-value=9.6e-06 Score=66.25 Aligned_cols=38 Identities=18% Similarity=0.236 Sum_probs=34.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhhH
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTG 378 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~l 378 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+....
T Consensus 51 ~gv~V~~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~ 90 (124)
T 2daz_A 51 MSIFVVGINPEGPAAADGRMRIGDELLEINNQILYGRSHQ 90 (124)
T ss_dssp CCEEEEEECTTSHHHHHTCCCTTCEECEESSCBCTTSCHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHH
Confidence 69999999999999985 999999999999999774433
No 289
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.88 E-value=1.4e-05 Score=62.32 Aligned_cols=40 Identities=20% Similarity=0.124 Sum_probs=34.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.+ +|+++ |++||+|++|||++|.+. .++.+.|
T Consensus 32 ~Gv~V~~v~~--~a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l 74 (96)
T 1ujv_A 32 TGQRVKQILD--IQGCPGLCEGDLIVEINQQNVQNLSHTEVVDIL 74 (96)
T ss_dssp TEEEEEEESC--GGGSTTCCSSCEEEEETTEECSSCCHHHHHHHH
T ss_pred CCEEEEEEec--ccccCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4899999998 46778 999999999999999886 7766654
No 290
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.87 E-value=1e-05 Score=65.24 Aligned_cols=37 Identities=30% Similarity=0.470 Sum_probs=33.9
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~ 376 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+..
T Consensus 49 ~~gv~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~ 87 (117)
T 2ehr_A 49 LKGIFIKQVLEDSPAGKTNALKTGDKILEVSGVDLQNAS 87 (117)
T ss_dssp CCSEEEEEECSSSTTTSSCSCCTTCEEEEESSCBCTTCC
T ss_pred cCCEEEEEeCCCChHHHcCCCCCCCEEEEECCEECCCCC
Confidence 369999999999999986 9999999999999998744
No 291
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.85 E-value=4.8e-06 Score=64.86 Aligned_cols=35 Identities=23% Similarity=0.204 Sum_probs=32.3
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~ 376 (385)
.|++|.+|.++|||+ + |++||+|++|||++|.+..
T Consensus 31 ~~~~V~~V~~~spA~-agL~~GD~Il~ing~~v~~~~ 66 (96)
T 2edv_A 31 LPLTVVAVTAGGSAH-GKLFPGDQILQMNNEPAEDLS 66 (96)
T ss_dssp SSCBCCCBCSSSSST-TTSCTTCBEEEESSCBSTTCC
T ss_pred CCeEEEEECCCCchh-hCCCCCCEEEEECCEECCCCC
Confidence 689999999999996 7 9999999999999998853
No 292
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.84 E-value=1.5e-05 Score=63.14 Aligned_cols=36 Identities=25% Similarity=0.399 Sum_probs=33.2
Q ss_pred CceEEEeeCCCCHHhhh---cCCCCEEEEECCEEcCChh
Q 016641 341 TGVLVNKINPLSDAHEI---LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a---L~~GDiI~~vng~~i~~~~ 376 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+..
T Consensus 43 ~~~~V~~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~ 81 (107)
T 3nfk_A 43 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEHT 81 (107)
T ss_dssp EEEEEEEECTTSHHHHSSSCCCTTCEEEEETTEECTTCC
T ss_pred CCeEEEEECCCCchHHcCCccCCCCEEEEECCEECCCCC
Confidence 57999999999999986 9999999999999999764
No 293
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=97.84 E-value=1e-05 Score=66.42 Aligned_cols=42 Identities=17% Similarity=0.334 Sum_probs=36.6
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChh--hHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDG--TGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~--~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||+.+.+.. ++.+.|
T Consensus 55 ~gi~V~~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 100 (127)
T 1wg6_A 55 LGIFIKSIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETL 100 (127)
T ss_dssp EEEEEEECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999986 9999999999999998844 665544
No 294
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=97.83 E-value=1.9e-05 Score=69.14 Aligned_cols=42 Identities=26% Similarity=0.331 Sum_probs=37.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 130 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 175 (196)
T 3gsl_A 130 NSIYVTKIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAAL 175 (196)
T ss_dssp CCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHH
T ss_pred CCEEEEEECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHH
Confidence 68999999999999986 99999999999999998 77776654
No 295
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=97.82 E-value=1.5e-05 Score=82.30 Aligned_cols=43 Identities=19% Similarity=0.164 Sum_probs=38.9
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhhc
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSML 383 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l~ 383 (385)
..|++|.+|.++|||+++ |++||+|++|||++| +..++.++|.
T Consensus 495 ~~gv~V~~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~ 538 (597)
T 4fgm_A 495 PQGLDVLNVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILE 538 (597)
T ss_dssp TTEEEEEEECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHT
T ss_pred CCeEEEEEeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHH
Confidence 358999999999999999 999999999999999 5888887763
No 296
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=97.81 E-value=1.6e-05 Score=70.03 Aligned_cols=42 Identities=17% Similarity=0.312 Sum_probs=38.1
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|..|.++|||+++ |++||+|++|||++|.+ ..++.+.|
T Consensus 110 ~~~~V~~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l 154 (192)
T 3k1r_A 110 CGLFISHLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLI 154 (192)
T ss_dssp EEEEEEEECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 99999999999999998 77776644
No 297
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.80 E-value=2e-05 Score=69.83 Aligned_cols=41 Identities=17% Similarity=0.156 Sum_probs=35.8
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHS 381 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~ 381 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.
T Consensus 136 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~ 180 (206)
T 3r0h_A 136 IGCTIADLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYAL 180 (206)
T ss_dssp SCEEEEEECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHH
T ss_pred ceEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 68999999999999986 999999999999999965 555444
No 298
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.80 E-value=1.5e-05 Score=63.58 Aligned_cols=42 Identities=14% Similarity=0.180 Sum_probs=36.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.+++|.+|.+++||+++ |++||.|++|||+++.+ ..++.+.|
T Consensus 41 ~~~~V~~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l 86 (109)
T 1wi4_A 41 PLVYIHEVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSII 86 (109)
T ss_dssp SSEEEEEECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHH
T ss_pred CCEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 47999999999999986 99999999999999987 56665544
No 299
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.80 E-value=2.5e-05 Score=63.26 Aligned_cols=42 Identities=19% Similarity=0.248 Sum_probs=35.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..++|.+|.++|||+++ |++||.|++|||+++.+ ..++.+.|
T Consensus 43 ~~i~I~~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l 88 (118)
T 1v6b_A 43 GKVVVSAVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAAL 88 (118)
T ss_dssp CSEEEEECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34999999999999987 99999999999999998 44555443
No 300
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.80 E-value=1.1e-05 Score=72.64 Aligned_cols=42 Identities=24% Similarity=0.445 Sum_probs=39.2
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|..|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 33 ~gv~V~~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l 77 (216)
T 2krg_A 33 PGQFIRSVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAI 77 (216)
T ss_dssp CSCBEEEECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHH
T ss_pred CCeEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999999 9999999999999999 888888765
No 301
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.80 E-value=1.4e-05 Score=64.74 Aligned_cols=35 Identities=26% Similarity=0.421 Sum_probs=32.5
Q ss_pred CceEEEeeCCCCHHhhh---cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI---LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a---L~~GDiI~~vng~~i~~~ 375 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+.
T Consensus 41 ~~v~V~~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~ 78 (119)
T 2cs5_A 41 MPVIVSRVAPGTPADLCVPRLNEGDQVVLINGRDIAEH 78 (119)
T ss_dssp EEEEEEEECSSSTTTSSSSCCCTTCEEEEETTBCTTSS
T ss_pred CCeEEEEECCCCHHHHhhcCCCCCCEEEEECCEECCCC
Confidence 58999999999999984 999999999999999874
No 302
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=97.79 E-value=2e-05 Score=68.92 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=37.4
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChhhHHhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDGTGSHS 381 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~~l~~~ 381 (385)
..|++|.+|.++|||+++ |++||+|++|||+++.+..++...
T Consensus 34 ~~g~~V~~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~ 77 (196)
T 3gsl_A 34 DPSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAV 77 (196)
T ss_dssp CCCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHH
T ss_pred CCCEEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHH
Confidence 369999999999999986 999999999999999988666544
No 303
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=97.78 E-value=2.5e-05 Score=59.03 Aligned_cols=33 Identities=18% Similarity=0.108 Sum_probs=29.9
Q ss_pred EEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChh
Q 016641 344 LVNKINPLSDAHEI-LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 344 ~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~ 376 (385)
.|.+|.++|||+++ |++||+|++|||+.+....
T Consensus 26 ~I~~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~ 59 (82)
T 1r6j_A 26 KITSIVKDSSAARNGLLTEHNICEINGQNVIGLK 59 (82)
T ss_dssp EEEEECTTSHHHHHTCCSSEEEEEETTEECTTCC
T ss_pred EEEEecCCCHHHHcCCCCCCEEEEECCEEcCCCC
Confidence 47899999999999 9999999999999996643
No 304
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=97.73 E-value=2.5e-05 Score=77.99 Aligned_cols=42 Identities=19% Similarity=0.227 Sum_probs=40.2
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ ||+||+|++|||++|.+..|+.++|
T Consensus 386 ~Gv~V~~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l 428 (451)
T 3pv2_A 386 IGVQVVGASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIA 428 (451)
T ss_dssp EEEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHT
T ss_pred CceEEEEECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 69999999999999999 9999999999999999999998876
No 305
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=97.72 E-value=3.3e-05 Score=78.43 Aligned_cols=66 Identities=17% Similarity=0.136 Sum_probs=54.0
Q ss_pred eccCccccccccHHHHhhcCCC-----------------CccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhh
Q 016641 316 CSLGLSCQTTENVQLRNNFGMR-----------------SEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~~g~~-----------------~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~ 377 (385)
.+.|+.++++ ++.+.+.++.. ...+||+|++|.++++|..+ +++||||++|||++|.|.+|
T Consensus 374 ~~~Gl~f~~L-t~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gVvvs~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~ 452 (539)
T 4fln_A 374 IVAGLVFTPL-SEPLIEEECEDTIGLKLLTKARYSVARFRGEQIVILSQVLANEVNIGYEDMNNQQVLKFNGIPIRNIHH 452 (539)
T ss_dssp CSTTEEEEEC-CHHHHTTSCSSSSCHHHHHHHHHCCCSSTTCCCEEEEEECCCGGGTTCSSCCSEEEEEETTEECCSHHH
T ss_pred cccceEEeeC-CHHHHHhhcccccCceeeehhhhhhhccCCceEEEEEEecCCchhhhcCCCCCCEEEeECCEEcCCHHH
Confidence 3679999888 55554443321 12479999999999999999 99999999999999999999
Q ss_pred HHhhh
Q 016641 378 GSHSM 382 (385)
Q Consensus 378 l~~~l 382 (385)
|.++|
T Consensus 453 l~~~l 457 (539)
T 4fln_A 453 LAHLI 457 (539)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 99876
No 306
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.71 E-value=1.7e-05 Score=63.40 Aligned_cols=35 Identities=31% Similarity=0.433 Sum_probs=33.4
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~ 375 (385)
.|++|..|.++|||+++ |++||+|++|||++|.+.
T Consensus 39 ~gv~V~~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~ 75 (113)
T 1um7_A 39 EGIFVSFILAGGPADLSGELRRGDRILSVNGVNLRNA 75 (113)
T ss_dssp CCCBCCCBCSSSHHHHTTCCCTTCEEEEESSCBCTTC
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCC
Confidence 68999999999999987 999999999999999987
No 307
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=97.70 E-value=2.7e-05 Score=68.39 Aligned_cols=38 Identities=24% Similarity=0.431 Sum_probs=35.2
Q ss_pred cCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChhh
Q 016641 340 VTGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~~ 377 (385)
..|++|.+|.++|||++.||+||+|++|||++|.+...
T Consensus 23 ~~g~~V~~v~~~spA~~gl~~GD~I~~vng~~v~~~~~ 60 (195)
T 2qbw_A 23 DDGIFVTRVQPEGPASKLLQPGDKIIQANGYSFINIEH 60 (195)
T ss_dssp CCSEEEEEECTTSTTTTTCCTTCEEEEETTEECTTCCH
T ss_pred CCCEEEEEECCCChHHhCCCCCCEEEEECCEECCCCCH
Confidence 47999999999999999999999999999999998653
No 308
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=97.67 E-value=3.6e-05 Score=76.56 Aligned_cols=42 Identities=19% Similarity=0.312 Sum_probs=40.2
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ ||+||+|++|||++|.+..|+.++|
T Consensus 363 ~gv~V~~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l 405 (436)
T 4a8c_A 363 KGIKIDEVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVL 405 (436)
T ss_pred CCEEEEEeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 69999999999999999 9999999999999999999998876
No 309
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.67 E-value=4.7e-05 Score=65.78 Aligned_cols=42 Identities=17% Similarity=0.355 Sum_probs=35.3
Q ss_pred cCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhh
Q 016641 340 VTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHS 381 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~ 381 (385)
..|++|.+|.++|||+++ |++||+|++|||+.|.+. .++.+.
T Consensus 110 ~~gi~V~~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~ 155 (170)
T 3egg_C 110 KLGIFVKTVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASV 155 (170)
T ss_dssp SBEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHH
T ss_pred CCCEEEEEECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 368999999999999986 999999999999999554 444433
No 310
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.66 E-value=5.3e-05 Score=66.87 Aligned_cols=42 Identities=19% Similarity=0.099 Sum_probs=38.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++...+
T Consensus 33 ~~~~V~~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~ 78 (200)
T 2qt5_A 33 GKPRVSNLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLL 78 (200)
T ss_dssp SCSEEEEECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999986 999999999999999999 7776544
No 311
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=97.65 E-value=4.9e-05 Score=67.09 Aligned_cols=42 Identities=19% Similarity=0.343 Sum_probs=39.3
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|. +..++.++|
T Consensus 135 ~g~~V~~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l 180 (200)
T 2qt5_A 135 RPVVITCVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSIL 180 (200)
T ss_dssp EEEEEEEECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999986 9999999999999999 999998765
No 312
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.65 E-value=1.6e-05 Score=65.47 Aligned_cols=42 Identities=14% Similarity=0.167 Sum_probs=36.2
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.+++|.+|.+++||+++ |++||+|++|||+.+.+. .++.+.|
T Consensus 57 ~~i~I~~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l 102 (130)
T 1i16_A 57 KPLTINRIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNII 102 (130)
T ss_dssp CCCEEEEECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999986 999999999999999874 5555443
No 313
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.63 E-value=4.7e-05 Score=60.05 Aligned_cols=41 Identities=20% Similarity=0.276 Sum_probs=35.5
Q ss_pred ceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 342 GVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 342 Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
+++|..|.+++||+++ |++||.|++|||+++.+ ..++.+.|
T Consensus 33 ~~~I~~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l 77 (103)
T 1ufx_A 33 LPRIVTIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARII 77 (103)
T ss_dssp SCEEEEECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHH
T ss_pred cEEEEEeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4699999999999996 99999999999999976 66665544
No 314
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.63 E-value=5.3e-05 Score=67.08 Aligned_cols=34 Identities=29% Similarity=0.414 Sum_probs=32.6
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN 374 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~ 374 (385)
.|++|.+|.++|||+++ ||+||+|++|||++|.+
T Consensus 45 ~g~~V~~V~~~spA~~aG~L~~GD~Il~vng~~v~~ 80 (206)
T 3r0h_A 45 TGCVITHVYPEGQVAADKRLKIFDHICDINGTPIHV 80 (206)
T ss_dssp SCEEEEEECTTSHHHHHCCCCTTCEEEEETTEECCG
T ss_pred CCeEEEEECCCChHHhcCCCCCCCEEEEECCEEcCC
Confidence 58999999999999987 99999999999999998
No 315
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.63 E-value=4.4e-05 Score=67.26 Aligned_cols=58 Identities=19% Similarity=0.285 Sum_probs=46.5
Q ss_pred eccCccccccccHHHHhhcCCCCccCceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 316 CSLGLSCQTTENVQLRNNFGMRSEVTGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 316 ~~lGi~~~~~~~~~~~~~~g~~~~~~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
..+|+.+.... .. .. ..|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.++|
T Consensus 119 ~~lG~~~~~~~-~~------~~--~~gv~V~~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 180 (196)
T 1p1d_A 119 VELGITISSPS-SR------KP--GDPLVISDIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQIL 180 (196)
T ss_dssp CCCCCEEECSC-SS------ST--TCCCEEEECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHH
T ss_pred CCcCEEEECCC-CC------CC--CCCEEEEEECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 34788776542 11 11 369999999999999987 99999999999999999 88888765
No 316
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.62 E-value=4.1e-05 Score=67.48 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=38.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcC--ChhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIA--NDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~--~~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|. +..++.+.|
T Consensus 36 ~~~~V~~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l 81 (196)
T 1p1d_A 36 SPPLISYIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLL 81 (196)
T ss_dssp CSEEEEECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 58999999999999986 9999999999999999 568887665
No 317
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.59 E-value=5.4e-05 Score=74.12 Aligned_cols=42 Identities=24% Similarity=0.278 Sum_probs=37.8
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++...|
T Consensus 31 ~gi~V~~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l 75 (391)
T 3tsz_A 31 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFL 75 (391)
T ss_dssp TEEEEEEECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999999 99999999999999987 66666554
No 318
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.56 E-value=9.9e-05 Score=55.09 Aligned_cols=28 Identities=29% Similarity=0.299 Sum_probs=23.1
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEE
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLV 167 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V 167 (385)
..|.|.+|++.||||+|||+.+...+.+
T Consensus 24 ~~CgGslIs~~~VLTAAHC~~~~~~v~~ 51 (80)
T 2pka_A 24 FQCGGVLVNPKWVLTAAHCKNDNYEVWL 51 (80)
T ss_dssp EEEEEEEEETTEEEECGGGCCSCCEEEE
T ss_pred eEEEEEEEcCCEEEECHHHCCCCcEEEE
Confidence 5799999999999999999986444333
No 319
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.50 E-value=8.1e-05 Score=74.29 Aligned_cols=42 Identities=24% Similarity=0.278 Sum_probs=38.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++...|
T Consensus 23 ~Gi~V~~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L 67 (468)
T 3shw_A 23 VGIFVAGVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFL 67 (468)
T ss_dssp TEEEEEEECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHH
T ss_pred CCEEEEEECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999999 99999999999999988 77776655
No 320
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.48 E-value=8.2e-05 Score=68.74 Aligned_cols=35 Identities=26% Similarity=0.290 Sum_probs=33.4
Q ss_pred CceEEEeeCCCCHHhh-h-cCCCCEEEEECCEEcCCh
Q 016641 341 TGVLVNKINPLSDAHE-I-LKKDDIILAFDGVPIAND 375 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~-a-L~~GDiI~~vng~~i~~~ 375 (385)
.|++|.+|.++|||++ + |++||+|++|||++|.+.
T Consensus 103 ~gi~V~~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~ 139 (263)
T 1z87_A 103 MPILISKIFKGLAADQTEALFVGDAILSVNGEDLSSA 139 (263)
T ss_dssp EEEEEEECCTTSHHHHCTTCCSSCEEEEESSCBCTTS
T ss_pred CCEEEEEECCCCHHHHhCCCCCCCEEEEECCEECCCc
Confidence 5899999999999999 7 999999999999999985
No 321
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=97.35 E-value=0.00019 Score=70.11 Aligned_cols=42 Identities=21% Similarity=0.258 Sum_probs=37.5
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+. .++.+.|
T Consensus 99 ~~~~V~~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l 143 (388)
T 1fc6_A 99 KDVVVLTPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLL 143 (388)
T ss_dssp SCEEEEEECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcEEEEEeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 68999999999999999 999999999999999995 5665543
No 322
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=97.32 E-value=0.0056 Score=54.42 Aligned_cols=155 Identities=15% Similarity=0.159 Sum_probs=88.6
Q ss_pred eEEEEEecCCEEEecccccCCC-ceEEEEEcCCCcEEE---EEEE----EecCC---CCeEEEEecCCc-ccccceeeec
Q 016641 141 TGSGFVIPGKKILTNAHVVADS-TFVLVRKHGSPTKYR---AQVE----AVGHE---CDLAILIVESDE-FWEGMHFLEL 208 (385)
Q Consensus 141 ~GSGfiI~~g~ILT~aHvv~~~-~~i~V~~~~~g~~~~---a~v~----~~d~~---~DlAlLkv~~~~-~~~~~~~l~l 208 (385)
..+|..|.++++|...|..++. ..+.+ +++.+. .++. ..|.+ .||++++++... |.+-.+.+
T Consensus 31 ~~~~LgI~~r~~l~P~H~~~~~~~~i~i----~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~kfrdi~k~f-- 104 (209)
T 2bhg_A 31 ICCATGVFGTAYLVPRHLFAEKYDKIML----DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGNKVRDITKHF-- 104 (209)
T ss_dssp EEEEEEEEBTEEEEEHHHHTSCCSEEEE----TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSCCBCCCGGGB--
T ss_pred EEEEeeEcCCEEEEEcccCCCCCcEEEE----cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCcccCchhhhc--
Confidence 5677888899999999998762 33433 233332 1222 23433 899999998653 22222222
Q ss_pred CCccc--CCCeEEEEecCCCCCCceEEEeeEeeccccc-ccCCCceeeEEEecccCCCCCCCccee-e---CCEEEEEEe
Q 016641 209 GDIPF--LQQAVAVVGYPQGGDNISVTKGVVSRVEPTQ-YVHGATQLMAIQIDAAINPGNSGGPAI-M---GNKVAGVAF 281 (385)
Q Consensus 209 ~~~~~--~G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~-~~~~~~~~~~i~~d~~i~~G~SGGPL~-~---~G~vVGI~s 281 (385)
.+... -++.+..+-++.... ..+..|.+....... ...+.....++..+++..+|+-||+|+ . .|+++||++
T Consensus 105 ~~~~~~~~~~~~~~~~n~~~~~-~~~~~g~~~~~~~~~~~~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHv 183 (209)
T 2bhg_A 105 RDTARMKKGTPVVGVVNNADVG-RLIFSGEALTYKDIVVSMDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHS 183 (209)
T ss_dssp CSSCEECTTCEEEEEEEETTTE-EEEEEEEESSCEECCC-----CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEE
T ss_pred ccccccCCCCeEEEEeccCccC-ceeeeeeEEEccceeeecCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEE
Confidence 33222 245576666665332 133344332222211 111222234688899999999999998 5 579999999
Q ss_pred eecCCCCceEEEEecchHHHHHHHHH
Q 016641 282 QNLSGAENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 282 ~~~~~~~~~~~aip~~~i~~~l~~l~ 307 (385)
++ ..+.|||-++ -++.++.++
T Consensus 184 aG---~g~~G~aa~l--~r~~~~~~~ 204 (209)
T 2bhg_A 184 AG---GNGVGYCSCV--SRSMLQKMK 204 (209)
T ss_dssp EE---ETTEEEEEEC--CHHHHHHHH
T ss_pred cc---CCCceEEEEc--CHHHHHHHH
Confidence 86 3456777654 344444444
No 323
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=97.27 E-value=0.00033 Score=56.14 Aligned_cols=40 Identities=25% Similarity=0.112 Sum_probs=33.2
Q ss_pred CceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|.+|.+|.+ |+..+ |++||+|++|||++|.+. .|+.+.|
T Consensus 34 ~g~~V~~I~~--~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~l 76 (113)
T 3soe_A 34 TGQKVKMILD--SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVL 76 (113)
T ss_dssp TEEEEEEESC--GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHH
T ss_pred CCcEEEEecC--hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHH
Confidence 4677999887 67888 999999999999999965 5676654
No 324
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=97.26 E-value=0.0077 Score=62.57 Aligned_cols=146 Identities=11% Similarity=0.130 Sum_probs=81.9
Q ss_pred eEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEE--EEEecC---CCCeEEEEecCCc-ccccceeeecCCcccC
Q 016641 141 TGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQ--VEAVGH---ECDLAILIVESDE-FWEGMHFLELGDIPFL 214 (385)
Q Consensus 141 ~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~--v~~~d~---~~DlAlLkv~~~~-~~~~~~~l~l~~~~~~ 214 (385)
.-+|..|.+.++|+..|...+. .+. + +|..+... ...+|. ..||++++++... |. ++.. -+.+....
T Consensus 24 ~~~~l~i~~~~~l~p~H~~~~~-~~~--i--~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~fr-di~~-~~~~~~~~ 96 (644)
T 2ijd_1 24 EFTMLGVHDNVAILPTHASPGE-SIV--I--DGKEVAILAAKALADQAGTNLEITIITLKRNEKFR-DIRP-HIPTQITE 96 (644)
T ss_dssp EEEEEEEEBTEEEEEGGGCCCS-EEE--E--TTEEEEEEECCEEECTTSCEEEEEEEEECSSCCBC-CCGG-GSCSSCCC
T ss_pred EEEEEEEeceEEEEccccCCCc-eEE--E--CCEEEEeccceeEEcCCCCceeEEEEECCCCCCcC-ChHH-hccCCccC
Confidence 4678888999999999988654 222 2 23322211 122344 4699999997543 32 2221 12222222
Q ss_pred CCeEEEEecCCCCCCceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecCCCCceEEEE
Q 016641 215 QQAVAVVGYPQGGDNISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYII 294 (385)
Q Consensus 215 G~~V~~iG~p~~~~~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~ai 294 (385)
......+-...+.....+..|.+....... ..+.....++..+.+..+|+-|+||+.+|+||||+.++. ...+|+.
T Consensus 97 ~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~-~~g~~~~~~~~y~~~T~~G~CG~~l~~~gkIvGiHvaG~---g~~g~a~ 172 (644)
T 2ijd_1 97 TNDGVLIVNTSKYPNMYVPVGAVTEQGYLN-LGGRQTARTLMYNFPTRAGQAGGVITCTGKVIGMHVGGN---GSHGFAA 172 (644)
T ss_dssp EEEEEEEECSSSSTTEEEEEEEEEEEEEEC-CTTSCEEEEEEECSCCCTTCTTCEEEETTEEEEEEEEEC---SSCEEEE
T ss_pred CCceEEEEcCCCCceEEEEeeeeeecccee-cCCCccccEEEEcCCCCCCCCCchhhhCCcEEEEEEcCC---CCceEEE
Confidence 222322222222221123445554322211 122233457888999999999999888899999999862 3457776
Q ss_pred ecc
Q 016641 295 PVP 297 (385)
Q Consensus 295 p~~ 297 (385)
++.
T Consensus 173 ~l~ 175 (644)
T 2ijd_1 173 ALK 175 (644)
T ss_dssp ECC
T ss_pred Ecc
Confidence 653
No 325
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.25 E-value=0.00048 Score=53.32 Aligned_cols=42 Identities=12% Similarity=0.086 Sum_probs=35.0
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
..++|.+|.++++|++. |++||.|++|||+.+... .|+.+.|
T Consensus 28 g~~~I~rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lL 73 (95)
T 3gge_A 28 GYAFIKRIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKL 73 (95)
T ss_dssp SCCEEEEECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHH
T ss_pred CcEEEEEEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 45899999999999986 999999999999999654 4555444
No 326
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.23 E-value=4.7e-05 Score=75.94 Aligned_cols=43 Identities=28% Similarity=0.380 Sum_probs=0.0
Q ss_pred cCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 340 VTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 340 ~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
..|++|.+|.++|||+++ |++||+|++|||++|.+..++.++|
T Consensus 382 ~~gv~V~~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l 425 (448)
T 1ky9_A 382 DQGVVVNNVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVL 425 (448)
T ss_dssp --------------------------------------------
T ss_pred CCeEEEEEecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHH
Confidence 368999999999999999 9999999999999999999998765
No 327
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.21 E-value=0.00023 Score=69.83 Aligned_cols=38 Identities=26% Similarity=0.347 Sum_probs=34.2
Q ss_pred ceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhhHHh
Q 016641 342 GVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGTGSH 380 (385)
Q Consensus 342 Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~l~~ 380 (385)
.++|..|.++|||+++ ||+||+|++|||++|.+.. +.+
T Consensus 91 ~~~V~~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~ 129 (403)
T 3k50_A 91 NALISYVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESE 129 (403)
T ss_dssp EEEEEEECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGG
T ss_pred eEEEEEeCCCChHHHcCCCCCCEEEEECCEEccchh-HHH
Confidence 4889999999999999 9999999999999999874 443
No 328
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.05 E-value=0.00045 Score=59.05 Aligned_cols=35 Identities=20% Similarity=0.165 Sum_probs=32.3
Q ss_pred ceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCChhh
Q 016641 342 GVLVNKINPLSDAHEI-LKKDDIILAFDGVPIANDGT 377 (385)
Q Consensus 342 Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~~~~ 377 (385)
| +|.+|.++|||+++ |++||+|++|||++|.+...
T Consensus 109 g-~v~~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~~ 144 (166)
T 1w9e_A 109 G-KITSIVKDSSAARNGLLTEHNICEINGQNVIGLKD 144 (166)
T ss_dssp T-EEEEECTTSHHHHTTCCSSEEEEEETTEECTTCCH
T ss_pred C-EEEEEccCCHHHHcCCCCCCEEEEECCEECCCCCh
Confidence 5 89999999999999 99999999999999998643
No 329
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=96.92 E-value=0.00043 Score=67.63 Aligned_cols=42 Identities=17% Similarity=0.202 Sum_probs=36.5
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCCh--hhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAND--GTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~--~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||+++.+. .++.+.|
T Consensus 232 ~g~~V~~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l 277 (388)
T 3suz_A 232 PTVILANMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGII 277 (388)
T ss_dssp CCCBCCCCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHT
T ss_pred CCEEEEeeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHH
Confidence 47999999999999987 999999999999999877 5655443
No 330
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=96.75 E-value=0.0024 Score=49.38 Aligned_cols=49 Identities=18% Similarity=0.336 Sum_probs=33.6
Q ss_pred ccCCCCCCCccee-e-CC--EEEEEEeeecCC--CCceEEEEecchHHHHHHHHH
Q 016641 259 AAINPGNSGGPAI-M-GN--KVAGVAFQNLSG--AENIGYIIPVPVIKHFITGVV 307 (385)
Q Consensus 259 ~~i~~G~SGGPL~-~-~G--~vVGI~s~~~~~--~~~~~~aip~~~i~~~l~~l~ 307 (385)
...|.|||||||+ . +| .++||+++...- ....+...-+....+|+++..
T Consensus 40 ~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~~c~~~~~p~vyt~V~~y~~WI~~~~ 94 (97)
T 1yph_E 40 VSSCMGDSGGPLVCKKNGAWTLVGIVSWGSSTCSTSTPGVYARVTALVNWVQQTL 94 (97)
T ss_dssp CBCCTTCTTCEEEEEETTEEEEEEEEEECCTTCCTTSEEEEEEHHHHHHHHHHHH
T ss_pred CCCCcCCCCCcEEEEeCCeEEEEEEEEeCCCCCCCCCCeEEEEHHHhHHHHHHHH
Confidence 3579999999999 4 33 799999986541 123455666666667766644
No 331
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=96.71 E-value=0.0013 Score=69.46 Aligned_cols=42 Identities=26% Similarity=0.394 Sum_probs=37.7
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCC--hhhHHhhh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIAN--DGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~--~~~l~~~l 382 (385)
.|++|.+|.++|||+++ |++||+|++|||++|.+ ..++.++|
T Consensus 331 ~gv~V~~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~e~~~~l 376 (721)
T 2xkx_A 331 EGIFISFILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIAL 376 (721)
T ss_pred CCeEEEEeCCCChHHhcCCCccCCEEEEECCEECCCCCHHHHHHHH
Confidence 69999999999999986 99999999999999988 67776654
No 332
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=96.38 E-value=0.0029 Score=66.70 Aligned_cols=36 Identities=25% Similarity=0.333 Sum_probs=33.9
Q ss_pred CceEEEeeCCCCHHhhh--cCCCCEEEEECCEEcCChh
Q 016641 341 TGVLVNKINPLSDAHEI--LKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~a--L~~GDiI~~vng~~i~~~~ 376 (385)
.|++|..|.++|||+++ |++||+|++|||+.+.+..
T Consensus 89 ~g~~V~~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~ 126 (721)
T 2xkx_A 89 PSIFITKIIPGGAAAQDGRLRVNDSILFVNEVDVREVT 126 (721)
T ss_pred CCeEEEEeCCCCHHHhcCCCCCCCEEEEECCEECCCCC
Confidence 69999999999999986 9999999999999999874
No 333
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=96.31 E-value=0.00063 Score=66.44 Aligned_cols=47 Identities=9% Similarity=0.126 Sum_probs=0.0
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhh-cCCCCEEEEECCEEcCC--hhhHHhh
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEI-LKKDDIILAFDGVPIAN--DGTGSHS 381 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~a-L~~GDiI~~vng~~i~~--~~~l~~~ 381 (385)
.+|+.- .+.+|.+|.++|||+++ |++||+|++|||++|.+ ..++.+.
T Consensus 309 ~lG~~i--~~g~I~~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~ 358 (388)
T 3suz_A 309 QLGFSV--QNGIICSLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQA 358 (388)
T ss_dssp ----------------------------------------------------
T ss_pred ccceEE--ecCEEEEeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHH
Confidence 355542 34489999999999999 99999999999999974 4555544
No 334
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=95.67 E-value=0.18 Score=41.53 Aligned_cols=146 Identities=18% Similarity=0.168 Sum_probs=80.4
Q ss_pred ceEEEEEecCCEEEecccccC-CCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeE
Q 016641 140 TTGSGFVIPGKKILTNAHVVA-DSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAV 218 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~-~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V 218 (385)
+.|=||.|+....+|+-||+. +++++.= .+-..+..+..-+++.+++.... ..++.-+.|.+...-|+-|
T Consensus 15 gsgwgfwVS~~~fiTaTHV~p~~~~eifG--------~p~~~i~v~~~GEf~~~rfp~~~-rpdvsgmiLEeg~peGtV~ 85 (185)
T 4ash_A 15 GTGWGFWVSGHVFITAKHVAPPKGTEIFG--------RKPGDFTVTSSGDFLKYYFTSAV-RPDIPAMVLENGCQEGVVA 85 (185)
T ss_dssp TTEEEEESSSSEEEEEGGGSCCTTCCBTT--------BCTTSEEEEEETTEEEEEESSCS-CTTSCCCEECSSCCTTCEE
T ss_pred cCceEEEEcccEEEEEEeecCCCchhhcC--------CccceEEEeecCcEEEEEcCCCc-CCCCcceEEecCCCCCcEE
Confidence 468899999999999999995 3332210 11112333445577788887642 1246666666555457665
Q ss_pred EEE-ecCCCCC-CceEEEeeEeecccccccCCCceeeEEEe-------cccCCCCCCCccee-eCC---EEEEEEeeecC
Q 016641 219 AVV-GYPQGGD-NISVTKGVVSRVEPTQYVHGATQLMAIQI-------DAAINPGNSGGPAI-MGN---KVAGVAFQNLS 285 (385)
Q Consensus 219 ~~i-G~p~~~~-~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGGPL~-~~G---~vVGI~s~~~~ 285 (385)
.++ -.+.+.. ...+..|.+....-....- .....++.+ |-...|||-|.|-+ ..| -|+||+.+...
T Consensus 86 svlikR~sgeliPlavRmgt~as~kIqGk~v-~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHtAatr 164 (185)
T 4ash_A 86 SVLVKRASGEMLALAVRMGSQAAIKIGSAVV-HGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHVAATR 164 (185)
T ss_dssp EEEEECTTCCEEEEEEEEEEEEEEEETTEEE-EEEEEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEEEECS
T ss_pred EEEEecCCCCcceeEEEecceeeeEEeeeEe-cceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEeecc
Confidence 543 3333321 1344455544432110000 011122322 33457999999999 544 49999998766
Q ss_pred CCCceEEEEe
Q 016641 286 GAENIGYIIP 295 (385)
Q Consensus 286 ~~~~~~~aip 295 (385)
.....-.|++
T Consensus 165 ~gNtVica~~ 174 (185)
T 4ash_A 165 SGNTVIAATH 174 (185)
T ss_dssp SSSEEEEECS
T ss_pred CCCEEEEEcC
Confidence 5444445543
No 335
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=95.47 E-value=0.011 Score=64.75 Aligned_cols=41 Identities=17% Similarity=0.103 Sum_probs=36.2
Q ss_pred CceEEEeeCCC--------CHHhhh---cCCCCEEEEECCEEcCChhhHHhhh
Q 016641 341 TGVLVNKINPL--------SDAHEI---LKKDDIILAFDGVPIANDGTGSHSM 382 (385)
Q Consensus 341 ~Gv~V~~V~~~--------spA~~a---L~~GDiI~~vng~~i~~~~~l~~~l 382 (385)
.+++|.+|.++ |||+++ || ||+|++|||++|.+..++...|
T Consensus 748 ~~~~v~~v~~~~~~~~~~~spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~ 799 (1045)
T 1k32_A 748 DHYVVAKAYAGDYSNEGEKSPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVL 799 (1045)
T ss_dssp TEEEEEEECBSCTTSTTCBCGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHH
T ss_pred CEEEEEEecCCCcccccCCChHHHCCCCcC-CCEEEEECCEEccchhhHHHhh
Confidence 68999999998 999975 99 9999999999999988776654
No 336
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=94.42 E-value=0.12 Score=55.68 Aligned_cols=78 Identities=12% Similarity=-0.032 Sum_probs=47.8
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEe--cCCCCeEEEEecCCcccccceeeecCCcc-----
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAV--GHECDLAILIVESDEFWEGMHFLELGDIP----- 212 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~--d~~~DlAlLkv~~~~~~~~~~~l~l~~~~----- 212 (385)
..|.+.+|++.||||.+|.... . .|.+..+...|.. +.. .+..|+++.|++... .++.|+.+.+..
T Consensus 56 ~~G~aTLI~pqYiVSvaHn~gy-~--~v~fG~~~n~Y~i--V~rnn~~~~Dy~~pRL~K~V--TEvaP~~~t~~g~~~~~ 128 (1048)
T 1wxr_A 56 EIGVATLINPQYIASVKHNGGY-T--NVSFGDGENRYNI--VDRNNAPSLDFHAPRLDKLV--TEVAPTAVTAQGAVAGA 128 (1048)
T ss_dssp TTCCCEEEETTEEEBCTTCCSC-C--EECCTTSCCCEEE--EECCBCSSSSCBCCEESSCC--CSSCCCCBCSSCSCTTG
T ss_pred CCceEEEEcCcEEEEeeecCCC-c--eEEeCCCcceEEE--EeeCCCCCCCeeeeeccccc--ccccceeeccccCcccc
Confidence 4588899999999999996543 2 3444322234544 332 234599999998753 246666655331
Q ss_pred ----cCCCeEEEEecC
Q 016641 213 ----FLQQAVAVVGYP 224 (385)
Q Consensus 213 ----~~G~~V~~iG~p 224 (385)
......+-+|..
T Consensus 129 y~d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 129 YLDKERYPVFYRLGSG 144 (1048)
T ss_dssp GGCTTTCCCEEEEECS
T ss_pred ccccccCceEEEECCc
Confidence 224455666654
No 337
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=94.10 E-value=0.33 Score=40.14 Aligned_cols=146 Identities=15% Similarity=0.154 Sum_probs=79.1
Q ss_pred ceEEEEEecCCEEEecccccC-CCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeE
Q 016641 140 TTGSGFVIPGKKILTNAHVVA-DSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAV 218 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~-~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V 218 (385)
+.|=||.|+....+|+-||+. +.+++.= .+-..+..+..-+++.+++..+. ..++.-+.|.+...-|+-+
T Consensus 26 gsgwgfwVS~~~fIT~tHV~p~~~~e~fG--------~p~~~i~v~~~GEf~~~rfpk~~-rpdvsgmiLEeg~peGtV~ 96 (194)
T 2fyq_A 26 GSGWGFWVSPTVFITTTHVVPTGVKEFFG--------EPLSSIAIHQAGEFTQFRFSKKM-RPDLTGMVLEEGCPEGTVC 96 (194)
T ss_dssp TTEEEEESSSSEEEEEGGGSCSSCSEETT--------EEGGGEEEEEETTEEEEEESSCS-CTTSCCCEECSSCCTTCEE
T ss_pred cCceeEEEcccEEEEEeeecCCCChhhcC--------ceeeeEEEeecCcEEEEEcCCCc-CCCCcceEEecCCCCCcEE
Confidence 568899999999999999995 3333210 11122333445577777776542 1245666665554446655
Q ss_pred EEE-ecCCCCC-CceEEEeeEeecccccccCCCceeeEEEe-------cccCCCCCCCccee-eCC---EEEEEEeeecC
Q 016641 219 AVV-GYPQGGD-NISVTKGVVSRVEPTQYVHGATQLMAIQI-------DAAINPGNSGGPAI-MGN---KVAGVAFQNLS 285 (385)
Q Consensus 219 ~~i-G~p~~~~-~~~~~~G~Vs~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGGPL~-~~G---~vVGI~s~~~~ 285 (385)
.++ -.+.+.. .+.+..|.+....-....-. ....++.+ |-...|||-|.|-+ ..| -|+|+..+...
T Consensus 97 silikR~sgellPlaVRmgt~as~kIqGk~v~-gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~Aatr 175 (194)
T 2fyq_A 97 SVLIKRDSGELLPLAVRMGAIASMRIQGRLVH-GQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAAATK 175 (194)
T ss_dssp EEEEECTTSCEEEEEEEEEEEEEEEETTEEEE-EEEEEECC-----------CGGGTTCEEEEEETTEEEEEEEEEEECS
T ss_pred EEEEecCCCCcceEEEEecceeeeEEeeeEec-ceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEeecc
Confidence 443 3333321 13445555544321100000 11122322 23456899999999 544 49999998766
Q ss_pred CCCceEEEEe
Q 016641 286 GAENIGYIIP 295 (385)
Q Consensus 286 ~~~~~~~aip 295 (385)
.....-.|++
T Consensus 176 sgNtVica~~ 185 (194)
T 2fyq_A 176 SGNTVVCAVQ 185 (194)
T ss_dssp SSSEEEEECC
T ss_pred CCCEEEEEec
Confidence 5444555554
No 338
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=86.02 E-value=3.4 Score=33.69 Aligned_cols=42 Identities=21% Similarity=0.467 Sum_probs=30.5
Q ss_pred ceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecCCCCceEEE
Q 016641 250 TQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYI 293 (385)
Q Consensus 250 ~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~a 293 (385)
....++.-..+..|||-||.|.+..-||||++++ +..-..|+
T Consensus 90 yQ~~~l~g~G~~epGDCGG~L~C~HGviGivTaG--G~g~VaF~ 131 (142)
T 2hrv_A 90 IQYNLLIGEGPCEPGDCGGKLLCKHGVIGIVTAG--GDNHVAFI 131 (142)
T ss_dssp EEEEEEEEECCCCTTCTTCEEEETTEEEEEEEEE--CSSEEEEE
T ss_pred hcccEEEEEcCCCCCCCCceeeeCCCceEEEecC--CCCEEEEE
Confidence 3344555566778999999999888899999985 33334554
No 339
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=85.78 E-value=0.71 Score=36.51 Aligned_cols=28 Identities=25% Similarity=0.459 Sum_probs=23.2
Q ss_pred ccCCCCCCCccee-eCCEEEEEEeeecCC
Q 016641 259 AAINPGNSGGPAI-MGNKVAGVAFQNLSG 286 (385)
Q Consensus 259 ~~i~~G~SGGPL~-~~G~vVGI~s~~~~~ 286 (385)
..-.+||||-|++ ..|+||+|+-.+...
T Consensus 94 G~g~~GdSGrpI~Dn~GrVVaIVlGG~~e 122 (149)
T 1vcp_A 94 GAGKPGDSGRPIFDNKGRVVAIVLGGANE 122 (149)
T ss_dssp TSCCTTCTTCEEECTTSCEEEEEEEEEEC
T ss_pred cCCCCCCCCCccCcCCCcEEEEEecCCCC
Confidence 3446899999999 999999999876543
No 340
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=85.50 E-value=0.71 Score=40.38 Aligned_cols=27 Identities=26% Similarity=0.460 Sum_probs=22.9
Q ss_pred cCCCCCCCccee-eCCEEEEEEeeecCC
Q 016641 260 AINPGNSGGPAI-MGNKVAGVAFQNLSG 286 (385)
Q Consensus 260 ~i~~G~SGGPL~-~~G~vVGI~s~~~~~ 286 (385)
.-.+||||-|++ ..|+||+|+-.+...
T Consensus 199 ~G~~GDSGRpI~DN~GrVVaIVLGGanE 226 (253)
T 2yew_A 199 SGKPGDSGRPIFDNTGKVVAIVLGGANE 226 (253)
T ss_dssp SCCSSCTTCEEECSSCBEEEEEEEEEEC
T ss_pred CCCCCCCCCccccCCCcEEEEEecCCCc
Confidence 346899999999 999999999887553
No 341
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=85.41 E-value=0.75 Score=36.85 Aligned_cols=28 Identities=29% Similarity=0.500 Sum_probs=23.3
Q ss_pred ccCCCCCCCccee-eCCEEEEEEeeecCC
Q 016641 259 AAINPGNSGGPAI-MGNKVAGVAFQNLSG 286 (385)
Q Consensus 259 ~~i~~G~SGGPL~-~~G~vVGI~s~~~~~ 286 (385)
..-.+||||-|++ ..|+||+|+-.+...
T Consensus 102 g~g~~GdSGrPi~Dn~GrVVaIVlGG~ne 130 (158)
T 4agk_A 102 GAGGPGDSGRPILDNSGKVVAIVLGGANE 130 (158)
T ss_dssp TSSCTTCTTCEEECTTSCEEEEEEEEEEC
T ss_pred ccCCCCCCCCccccCCCCEEEEEecCCCc
Confidence 3457899999999 999999999876543
No 342
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=85.40 E-value=0.75 Score=36.97 Aligned_cols=27 Identities=15% Similarity=0.351 Sum_probs=22.7
Q ss_pred cCCCCCCCccee-eCCEEEEEEeeecCC
Q 016641 260 AINPGNSGGPAI-MGNKVAGVAFQNLSG 286 (385)
Q Consensus 260 ~i~~G~SGGPL~-~~G~vVGI~s~~~~~ 286 (385)
.-.+||||-|++ ..|+||+|+-.+...
T Consensus 104 vG~~GDSGRpI~DN~GrVVaivlgg~~e 131 (161)
T 1svp_A 104 VGGRGDAGRPIMDNSGRVVAIVLGGADE 131 (161)
T ss_dssp SCCTTCTTCEEECTTSCEEEEEEEEEEC
T ss_pred CCCCCCCCCccCcCCCcEEEEEecCCCC
Confidence 346899999999 999999999876543
No 343
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=85.35 E-value=2 Score=36.65 Aligned_cols=132 Identities=16% Similarity=0.148 Sum_probs=73.7
Q ss_pred HHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCe
Q 016641 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDL 189 (385)
Q Consensus 110 ~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~Dl 189 (385)
..+.+.|-+|....- ......|-|+.- +|-+=|-.||-+++. +.. +++...- ...|-..|+
T Consensus 20 ~~l~dGVYRI~~~gl-----------~G~~Q~GVGv~k-~GVFHTMWHVTrGa~---l~~--~g~~l~P--~WasV~~Dl 80 (198)
T 3e90_B 20 GDTTTGVYRIMTRGL-----------LGSYQAGAGVMV-EGVFHTLWHTTKGAA---LMS--GEGRLDP--YWGSVKEDR 80 (198)
T ss_dssp CCCCSEEEEEEEEET-----------TEEEEEEEEEEE-TTEEEECHHHHTTCC---EEE--TTEEECE--EEEETTTTE
T ss_pred ccCCCceEEEEeccc-----------cccceeeeEEee-CCEEEeeeeecCcce---EEE--CCcEecc--eeehheece
Confidence 445677888887542 122345666544 899999999998764 222 3332221 223445565
Q ss_pred EEEEecCCcccccceeeecCCcccCCCeEEEEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCC
Q 016641 190 AILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSG 267 (385)
Q Consensus 190 AlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 267 (385)
+ ..-.+ . +|...-+-.++|.++..+.+... .....|++.- .+ .....|.. ...+|.||
T Consensus 81 i--sYGG~-----W---kL~~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~-------~~-g~iGaV~l--D~p~GTSG 140 (198)
T 3e90_B 81 L--CYGGP-----W---KLQHKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKT-------PE-GEIGAVTL--DFPTGTSG 140 (198)
T ss_dssp E--EESSS-----C---CCCCCCCSSSCEEEEECCTTSCCEEEEECCEEEEE-------TT-EEEEEECC--CCCTTCTT
T ss_pred e--ecCCc-----c---cCCcccCCCceEEEEEECCCCceEEEEeCCeEEEc-------CC-CeEEEEEC--CCCCCCCC
Confidence 2 23222 1 23221122378888888776542 1122333321 11 12333444 45689999
Q ss_pred ccee-eCCEEEEEE
Q 016641 268 GPAI-MGNKVAGVA 280 (385)
Q Consensus 268 GPL~-~~G~vVGI~ 280 (385)
+|++ .+|+|||+-
T Consensus 141 SPIin~~G~VVGLY 154 (198)
T 3e90_B 141 SPIVDKNGDVIGLY 154 (198)
T ss_dssp CEEECTTCCEEEEC
T ss_pred CceecCCCcEEEEe
Confidence 9999 999999984
No 344
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=85.20 E-value=2.3 Score=36.17 Aligned_cols=133 Identities=19% Similarity=0.194 Sum_probs=73.5
Q ss_pred HHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCe
Q 016641 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDL 189 (385)
Q Consensus 110 ~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~Dl 189 (385)
..+.+.|-+|....- ......|-|+.- +|-+=|-.||-+++. +.. +++...- ...|-..|+
T Consensus 25 ~~~~dGVYRI~~~gl-----------~G~~Q~GVGv~k-~GVFHTMWHVTrGa~---l~~--~g~~l~P--~wasV~~Dl 85 (191)
T 3u1j_B 25 AELEEGVYRIKQQGI-----------FGKTQVGVGVQK-EGVFHTMWHVTRGAV---LTH--NGKRLEP--NWASVKKDL 85 (191)
T ss_dssp CCCCSEEEEEEEEET-----------TEEEEEEEEEEE-TTEEEEEHHHHTTCC---EEE--TTEEECE--EEEETTTTE
T ss_pred ccCCCceEEEEeccc-----------cccceeeeEEee-CCEEEeeeeecCcce---EEE--CCcEecc--eeecceece
Confidence 456677888887542 122345666544 888899999988764 222 3332221 223445565
Q ss_pred EEEEecCCcccccceeeecCCcccCCCeEEEEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCC
Q 016641 190 AILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSG 267 (385)
Q Consensus 190 AlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 267 (385)
+ ..-.+ -+|...-+-.++|.++-.+.+... .....|++.- .+ .....|.+ ...+|.||
T Consensus 86 i--sYGG~--------WkL~~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~-------~~-g~iGaV~l--D~p~GTSG 145 (191)
T 3u1j_B 86 I--SYGGG--------WRLSAQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQT-------TT-GEIGAIAL--DFKPGTSG 145 (191)
T ss_dssp E--EESSS--------CCCCCCCCTTCCEEEEECCTTSCCEEEEECCEEEEC-------SS-CEEEEECC--CCCTTCTT
T ss_pred e--ecCCc--------ccCCcccCCCceEEEEEECCCCceEEEEeCCeEEEc-------CC-CeEEEEEC--CCCCCCCC
Confidence 2 22221 123221122477888888776542 1122333321 11 12334444 45689999
Q ss_pred ccee-eCCEEEEEEe
Q 016641 268 GPAI-MGNKVAGVAF 281 (385)
Q Consensus 268 GPL~-~~G~vVGI~s 281 (385)
+|++ .+|+|||+--
T Consensus 146 SPIin~~G~VVGLYG 160 (191)
T 3u1j_B 146 SPIINREGKVVGLYG 160 (191)
T ss_dssp CEEECTTSCEEEECC
T ss_pred CceecCCCcEEEEec
Confidence 9999 9999999843
No 345
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=84.92 E-value=1.7 Score=36.92 Aligned_cols=132 Identities=17% Similarity=0.196 Sum_probs=72.7
Q ss_pred HHhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCe
Q 016641 110 ELALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDL 189 (385)
Q Consensus 110 ~~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~Dl 189 (385)
..+...|-+|....- ......|-|+.- +|-+=|-.||-+++. +.. +++.+.- ...|-..|+
T Consensus 16 ~~l~dGvYRI~~~gl-----------~G~~Q~GVGv~~-~GVFHTmWHVTrGa~---l~~--~g~~l~P--~wa~V~~Dl 76 (185)
T 2fom_B 16 AELEDGAYRIKQKGI-----------LGYSQIGAGVYK-EGTFHTMWHVTRGAV---LMH--KGKRIEP--SWADVKKDL 76 (185)
T ss_dssp --CCSEEEEEEEEET-----------TEEEEEEEEEEE-TTEEEEEHHHHTTCC---EEE--TTEEECE--EEEETTTTE
T ss_pred ccCCCcEEEEEeccc-----------cccceeeeEEee-CCEEEeeeeecCcce---EEE--CCcEecc--eeehheece
Confidence 457888888887542 123345666654 899999999998864 222 3333221 223445565
Q ss_pred EEEEecCCcccccceeeecCCcccCCCeEEEEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCC
Q 016641 190 AILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSG 267 (385)
Q Consensus 190 AlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 267 (385)
+ ..-.+ . +|...-+-+++|.++-.+.+..- .....|+..- .+ .....|.+ ....|.||
T Consensus 77 i--sYGG~-----W---kL~~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~-------~~-GeigaI~l--D~p~GTSG 136 (185)
T 2fom_B 77 I--SYGGG-----W---KLEGEWKEGEEVQVLALEPGKNPRAVQTKPGLFKT-------NT-GTIGAVSL--DFSPGTSG 136 (185)
T ss_dssp E--EESSS-----C---CCCCCCCTTCCEEEEECCTTSCCEEEEECCEEEEC-------SS-CEEEEECC--CSCGGGTT
T ss_pred e--ecCCc-----c---cCccccCCCceEEEEEECCCCceEEEEcCCceeec-------CC-CeEEEEEC--CCCCCCCC
Confidence 2 23222 1 23222223577888877666542 1122222221 11 12334444 45689999
Q ss_pred ccee-eCCEEEEEE
Q 016641 268 GPAI-MGNKVAGVA 280 (385)
Q Consensus 268 GPL~-~~G~vVGI~ 280 (385)
+|++ .+|+|||+-
T Consensus 137 SPIin~~G~vvGLY 150 (185)
T 2fom_B 137 SPIVDKKGKVVGLY 150 (185)
T ss_dssp CEEECTTSCEEEET
T ss_pred CceEccCCcEEEEe
Confidence 9999 999999984
No 346
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=84.83 E-value=0.67 Score=37.08 Aligned_cols=28 Identities=18% Similarity=0.395 Sum_probs=23.2
Q ss_pred cccCCCCCCCccee-eCCEEEEEEeeecC
Q 016641 258 DAAINPGNSGGPAI-MGNKVAGVAFQNLS 285 (385)
Q Consensus 258 d~~i~~G~SGGPL~-~~G~vVGI~s~~~~ 285 (385)
...-.+|+||-|++ ..|+||+|+-.+..
T Consensus 100 ~G~g~~GdSGrpI~Dn~GrVVaIVlGGa~ 128 (157)
T 1ep5_B 100 KGVGAKGDSGRPILDNQGRVVAIVLGGVN 128 (157)
T ss_dssp TTCCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred cCCCCCCCCCCccCcCCCcEEEEEecCCC
Confidence 33457899999999 99999999987644
No 347
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=84.61 E-value=1.6 Score=36.96 Aligned_cols=134 Identities=15% Similarity=0.126 Sum_probs=73.7
Q ss_pred HhCCCeEEEEeeecCCCCCCCCCCCCCCcceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeE
Q 016641 111 LALDSVVKIFTVSSSPNYGLPWQNKSQRETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLA 190 (385)
Q Consensus 111 ~~~~SVV~I~~~~~~~~~~~p~~~~~~~~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlA 190 (385)
.+...|-+|....- ......|-|+.- +|-+=|-.||-+++. +.. +++.+.- ...|-..|++
T Consensus 16 ~l~dGvYRI~~~gl-----------~G~~Q~GVGv~~-~GVFHTmWHVTrGa~---L~~--~g~~l~P--~wasV~~Dli 76 (185)
T 2ggv_B 16 DTTTGVYRIMTRGL-----------LGSYQAGAGVMV-EGVFHTLWATTKGAA---LMS--GEGRLDP--YWGSVKEDRL 76 (185)
T ss_dssp CCCSEEEEEEEECS-----------SSEEEEEEEEEE-TTEEEECHHHHTTCC---EEE--TTEEECE--EEEETTTTEE
T ss_pred cCCCcEEEEEeccc-----------cccceeeeEEee-CCEEEeeeeecCcce---EEE--CCcEecc--eeehhhccee
Confidence 36677888776442 123345767654 899999999998764 222 3333222 2234455652
Q ss_pred EEEecCCcccccceeeecCCcccCCCeEEEEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCc
Q 016641 191 ILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGG 268 (385)
Q Consensus 191 lLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGG 268 (385)
..-.+ . +|...-+-+++|.++-.+.+..- .....|+..- . ......|.+ ....|.||+
T Consensus 77 --sYGG~-----W---kL~~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~-------~-~GeigAI~l--D~p~GTSGS 136 (185)
T 2ggv_B 77 --CYGGP-----W---QLQHKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKT-------P-EGEIGAVTL--DFPTGTSGS 136 (185)
T ss_dssp --EESSS-----C---CCCCCCCSSSCEEEEECCTTSCCEEEEECCEEEEE-------T-TEEEEEECC--CCCGGGTTC
T ss_pred --ecCCc-----c---cCccccCCCceEEEEEECCCCceEEEEccCceEec-------C-CCeEEEEEC--CCCCCCCCC
Confidence 23222 1 22222233577888887766442 1122222221 1 112233444 456899999
Q ss_pred cee-eCCEEEEEEeee
Q 016641 269 PAI-MGNKVAGVAFQN 283 (385)
Q Consensus 269 PL~-~~G~vVGI~s~~ 283 (385)
|++ .+|+|||+---.
T Consensus 137 PIin~~G~vvGLYGNG 152 (185)
T 2ggv_B 137 PIVDKNGDVIGLYGNG 152 (185)
T ss_dssp EEECTTSCEEEEEEEE
T ss_pred ceEcCCCcEEEEecce
Confidence 999 999999996443
No 348
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=84.43 E-value=1.7 Score=36.46 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=62.8
Q ss_pred cceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeE
Q 016641 139 ETTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAV 218 (385)
Q Consensus 139 ~~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V 218 (385)
...|-|+.- +|-+=|-.||-+++. +.. +++.+.- ...|-..|++ ..-.+ . +|...-+-+++|
T Consensus 19 ~Q~GVGv~~-~GVFHTmWHVTrGa~---l~~--~g~~~~P--~wa~V~~Dli--sYGG~-----W---kL~~kW~g~~eV 80 (172)
T 2fp7_B 19 YQAGAGVMV-EGVFHTLWHTTKGAA---LMS--GEGRLDP--YWGSVKEDRL--CYGGP-----W---KLQHKWNGHDEV 80 (172)
T ss_dssp CEEEEEEEE-TTEEEEEHHHHTTCC---EEE--TTEEECE--EEEETTTTEE--EESSS-----C---CCCCCCCSSSCE
T ss_pred ceeeeEEee-CCEEEeeeeecCCce---EEE--CCcEecc--eeehheecee--ecCCc-----c---ccCcccCCCceE
Confidence 346777654 889999999998764 222 3333222 2234455652 22222 1 222222335778
Q ss_pred EEEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEEe
Q 016641 219 AVVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVAF 281 (385)
Q Consensus 219 ~~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~s 281 (385)
.++-.+.+..- .....|+..- . ......|.+ ....|.||+|++ .+|+|||+--
T Consensus 81 ql~a~~Pgk~~~n~qt~Pg~f~~-------~-~GeigaI~l--D~p~GtSGSPIin~~G~vVGLYG 136 (172)
T 2fp7_B 81 QMIVVEPGKNVKNVQTKPGVFKT-------P-EGEIGAVTL--DYPTGTSGSPIVDKNGDVIGLYG 136 (172)
T ss_dssp EEEECCTTSCCEEEEECCEEEEE-------T-TEEEEEECC--CCCGGGTTCEEECTTSCEEEESC
T ss_pred EEEEECCCCceEEEEccCceEec-------C-CCeEEEEEC--CCCCCCCCCceEccCCcEEEEec
Confidence 88877665442 1122222221 1 112233444 456899999999 9999999843
No 349
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=83.36 E-value=2.5 Score=37.08 Aligned_cols=113 Identities=17% Similarity=0.230 Sum_probs=62.3
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEE
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVA 219 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~ 219 (385)
..|-|+.- +|-+=|-.||-.++. +.. +++...- ...|-..|++ ..-.+ -+|...-.-.++|.
T Consensus 85 Q~GVGv~~-~GVFHTmWHVTrGa~---l~~--~g~~~~P--~wa~V~~Dli--sYGG~--------WkL~~~W~g~~eVq 146 (236)
T 3lkw_A 85 QVGVGVFQ-EGVFHTMWHVTRGAV---LMY--QGKRLEP--SWASVKKDLI--SYGGG--------WRFQGSWNAGEEVQ 146 (236)
T ss_dssp EEEEEEEE-TTEEEECHHHHTTCC---EEE--TTEEECE--EEEETTTTEE--EESSS--------CCCCCCCCTTCCEE
T ss_pred eeeeEEee-CCEEEEeeeecCcce---EEE--CCcEecc--eeehheecee--ecCCC--------ccCCcccCCCceEE
Confidence 45666544 888999999988764 222 2332221 2234455652 23222 12322112247788
Q ss_pred EEecCCCCCC--ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCccee-eCCEEEEEE
Q 016641 220 VVGYPQGGDN--ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAI-MGNKVAGVA 280 (385)
Q Consensus 220 ~iG~p~~~~~--~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~-~~G~vVGI~ 280 (385)
++.++.+... .....|++.- .+ .....|.. ...+|.||+|++ .+|+|||+-
T Consensus 147 v~A~~Pg~~~~~~qt~PG~~~~-------~~-g~igav~l--D~p~GTSGSPIin~~G~VvGLY 200 (236)
T 3lkw_A 147 VIAVEPGKNPKNVQTAPGTFKT-------PE-GEVGAIAL--DFKPGTAGSPIVNREGKIVGLY 200 (236)
T ss_dssp EEECCTTSCCEEEEECCEEEEE-------TT-EEEEEECC--CCCTTCTTCEEECTTSCEEEES
T ss_pred EEEECCCCceEEEEeCCeEEEc-------CC-CeEEEEEC--CCCCCCCCCceecCCCcEEEEe
Confidence 8888776542 1122333321 11 12333444 456899999999 999999984
No 350
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=82.49 E-value=0.86 Score=40.20 Aligned_cols=26 Identities=19% Similarity=0.388 Sum_probs=22.4
Q ss_pred cCCCCCCCccee-eCCEEEEEEeeecC
Q 016641 260 AINPGNSGGPAI-MGNKVAGVAFQNLS 285 (385)
Q Consensus 260 ~i~~G~SGGPL~-~~G~vVGI~s~~~~ 285 (385)
.-.+||||-|++ ..|+||+|+-.+..
T Consensus 209 ~G~~GDSGRpI~DN~GrVVaIVLGGan 235 (264)
T 1kxf_A 209 VGGRGDSGRPIMDNSGRVVAIVLGGAD 235 (264)
T ss_dssp SCCTTCTTCEEECTTSCEEEEEEEEEE
T ss_pred CCCCCCCCCccccCCCcEEEEEecCCC
Confidence 346899999999 99999999988654
No 351
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=81.87 E-value=2.6 Score=35.12 Aligned_cols=129 Identities=16% Similarity=0.178 Sum_probs=65.4
Q ss_pred ceEEEEEecCCEEEecccccCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEE
Q 016641 140 TTGSGFVIPGKKILTNAHVVADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVA 219 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~ 219 (385)
+..+|++.-.+++++|+|.....+ . -.-+..+...||.+.+.....- +.++--... +-|+
T Consensus 20 G~~~~~V~vgnykivN~HLaT~eD--------~-----~~~V~~~y~rDL~V~~t~a~G~-DtIarC~Ct------~GvY 79 (166)
T 1z8r_A 20 GHQSGAVYVGNYKVVNRHLATHVD--------W-----QNCVWEDYNRDLLVSTTTAHGC-DTIARCQCT------TGVY 79 (166)
T ss_dssp CCCCCSEEETTEEEEEGGGCCHHH--------H-----HTEEEEETTTTEEEEECSSCCC-CCBBCCCCS------EEEE
T ss_pred cCCCCcEEEeeeeEEechhCCchh--------h-----hcceeeeecccEEEEeccCCCC-Ccccccccc------CceE
Confidence 345677777999999999975210 0 0112334467999888876420 122211111 0011
Q ss_pred EEecCCCCCC---ceEEEeeEeecccccccCCCceeeEEEecccCCCCCCCcceeeCCEEEEEEeeecCCCCceEEE
Q 016641 220 VVGYPQGGDN---ISVTKGVVSRVEPTQYVHGATQLMAIQIDAAINPGNSGGPAIMGNKVAGVAFQNLSGAENIGYI 293 (385)
Q Consensus 220 ~iG~p~~~~~---~~~~~G~Vs~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPL~~~G~vVGI~s~~~~~~~~~~~a 293 (385)
- -..... ..+.....-.+....+........++.-..+..|||-||.|.+..-||||++++ +..-..|+
T Consensus 80 Y---c~s~~k~yPV~~~~p~~~~iqeseYYP~ryQ~~vl~~~G~~epGDCGG~L~C~HGviGivTaG--G~g~VaF~ 151 (166)
T 1z8r_A 80 F---CASKSKHYPVSFEGPGLVEVQESEYYPKRYQSHVLLATGFSEPGDAGGILRCEHGVIGLVTMG--GEGVVGFA 151 (166)
T ss_dssp E---BTTTCSEEEEECBCCSEEEECSBTTBCSEEEESEEEEECSSSCCCCBSEEECSSSEEEEEEEE--CSSEEEEE
T ss_pred E---EeecCcCcceEEcCCCeEEecccCCCchhhhccEEEEecCCCCCCCCceeeeCCCceEEEecC--CCCEEEEE
Confidence 1 000000 000000111122222222233334555566778999999999777799999985 33334554
No 352
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=79.23 E-value=1.3 Score=37.62 Aligned_cols=40 Identities=25% Similarity=0.442 Sum_probs=26.2
Q ss_pred cCCCCCCCccee-eCCEEEEEEeeecC--CCCceEEEEecchH
Q 016641 260 AINPGNSGGPAI-MGNKVAGVAFQNLS--GAENIGYIIPVPVI 299 (385)
Q Consensus 260 ~i~~G~SGGPL~-~~G~vVGI~s~~~~--~~~~~~~aip~~~i 299 (385)
..-.|.||||++ ..|.+|||..+..- +.-.--.++|++.+
T Consensus 154 S~lkGSSGgPvLC~~GHaVGmf~aav~trGvakai~fvPve~l 196 (203)
T 3su6_A 154 SYLKGSAGGPLLCPAGHAVGIFRTAVSTRGVAKAVDFIPVESL 196 (203)
T ss_dssp GGTTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEEEEHHHH
T ss_pred eeccCCCCCceecCCCCEEEEEEEEEEcCceeeeEEEEEcccc
Confidence 345799999999 99999999754332 11122344676544
No 353
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=48.75 E-value=51 Score=23.38 Aligned_cols=60 Identities=18% Similarity=0.277 Sum_probs=38.5
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEEEEecCC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQ 225 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~ 225 (385)
..+.|.+. +|+.+.+.+.++|...++.|=.+.... ..-....++.----|+.|..+.-|.
T Consensus 15 ~~V~V~L~-~g~~~~G~L~~~D~~mNlvL~d~~e~~--~~~~~~~lg~v~iRG~~I~~i~~~d 74 (77)
T 1i4k_A 15 SPVIVRLK-GGREFRGTLDGYDIHMNLVLLDAEEIQ--NGEVVRKVGSVVIRGDTVVFVSPAP 74 (77)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEEEEEEECGGGEEEEEECC
T ss_pred CEEEEEEc-CCCEEEEEEEEEcCCCCeEEeeEEEEe--cCCcEeECCEEEECCCEEEEEEeCC
Confidence 57888887 899999999999999999887765431 1112222221111266666666553
No 354
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=45.83 E-value=39 Score=23.93 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=28.6
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 15 ~~V~V~l~-~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILK-KGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEET-TSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEC-CCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 57888887 8999999999999999998877654
No 355
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=45.01 E-value=35 Score=25.17 Aligned_cols=33 Identities=6% Similarity=0.009 Sum_probs=28.6
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+.+.++|...+|.|=....
T Consensus 15 k~V~V~l~-~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQ-DGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEET-TCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEEC-CCeEEEEEEEEECCCCeEEecCEEE
Confidence 57888887 8999999999999999998876654
No 356
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=44.96 E-value=70 Score=21.71 Aligned_cols=38 Identities=18% Similarity=0.251 Sum_probs=32.2
Q ss_pred cCCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCC
Q 016641 159 VADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESD 197 (385)
Q Consensus 159 v~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~ 197 (385)
....+.+.++.. ||+-|.++++.++...+-+++++...
T Consensus 4 f~~GedVLarws-DG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 4 LWEGQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp CCTTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred cccCCEEEEEec-CCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 345667788776 99999999999999999999999765
No 357
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=42.21 E-value=72 Score=22.86 Aligned_cols=33 Identities=18% Similarity=0.278 Sum_probs=28.7
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+++..+|...++.|=.+..
T Consensus 20 ~~V~V~l~-~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 20 NLVLVKLK-GNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp SEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEc-CCcEEEEEEEEEcCCCCEEEccEEE
Confidence 57888886 8999999999999999998877654
No 358
>3sze_A Serine protease ESPP; parallel beta-helix, hydrolase; 2.50A {Escherichia coli O157}
Probab=42.20 E-value=2.7e+02 Score=29.80 Aligned_cols=54 Identities=17% Similarity=0.170 Sum_probs=34.8
Q ss_pred ceEEEEEecCCEEEecccccCCC-ceEEEEEcCCCcEEEEEEEE-ecCCCCeEEEEecCC
Q 016641 140 TTGSGFVIPGKKILTNAHVVADS-TFVLVRKHGSPTKYRAQVEA-VGHECDLAILIVESD 197 (385)
Q Consensus 140 ~~GSGfiI~~g~ILT~aHvv~~~-~~i~V~~~~~g~~~~a~v~~-~d~~~DlAlLkv~~~ 197 (385)
..|...+|++.||+|.+|..... ..-.+.+. ...|.. +. ...+.|+.+-|++.-
T Consensus 55 ~~G~aTLv~pQYiVSVkHN~~~~~gy~~v~FG--~~~Y~~--V~~r~~~~Dfh~pRLnK~ 110 (968)
T 3sze_A 55 NKGSTTSIGGAYSITATHNTKNHHSVATQNWG--NSTYKQ--TDWNTSHPDFAVSRLDKF 110 (968)
T ss_dssp TTSSCEECSTTEEEEEGGGCTTCHHHHEEEET--TEEEEE--EEEEEETTTEEEEEESSC
T ss_pred CCceeEEecCceEEEEEecccccCcceeEeec--CceEEE--eccccCCCCcccccccee
Confidence 35888999999999999987433 22235552 223332 22 222449999999864
No 359
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=42.19 E-value=46 Score=24.12 Aligned_cols=33 Identities=12% Similarity=0.262 Sum_probs=28.7
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+.+.++|...++.|=....
T Consensus 26 ~~V~V~Lk-~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLK-GDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEc-CCcEEEEEEEEECCCceeEEccEEE
Confidence 57889987 8999999999999999998876654
No 360
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=41.56 E-value=54 Score=23.59 Aligned_cols=33 Identities=18% Similarity=0.245 Sum_probs=28.4
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+.+..+|...++.|=....
T Consensus 22 ~~V~V~l~-~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLR-DSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEG-GGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEc-CCcEEEEEEEEEcCCCeeEEccEEE
Confidence 57888887 8999999999999999998776644
No 361
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=40.03 E-value=56 Score=23.18 Aligned_cols=33 Identities=9% Similarity=0.164 Sum_probs=28.5
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+++..+|...++.|=.+..
T Consensus 16 ~~V~VeLk-~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETN-TGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEC-CCcEEEEEEEEEccceeEEEEeEEE
Confidence 57888887 8899999999999999998877654
No 362
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=39.84 E-value=51 Score=24.58 Aligned_cols=33 Identities=12% Similarity=0.188 Sum_probs=28.5
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+.+.++|...++.|=....
T Consensus 20 ~~V~V~l~-~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 20 EIVYVKLR-GDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp SEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEC-CCcEEEEEEEEECCcccEEeecEEE
Confidence 57888886 8999999999999999998776654
No 363
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=38.82 E-value=54 Score=24.60 Aligned_cols=33 Identities=9% Similarity=0.115 Sum_probs=28.1
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk-~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMK-SEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEES-SSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEC-CCcEEEEEEEEEcccCCeEeeeEEE
Confidence 47888887 8999999999999999998766543
No 364
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=38.77 E-value=45 Score=23.66 Aligned_cols=32 Identities=25% Similarity=0.305 Sum_probs=27.5
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEec
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVE 195 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~ 195 (385)
..+.|.+. +|+.+.+++.++|...++.|=.+.
T Consensus 15 k~V~V~Lk-~g~~~~G~L~~~D~~mNlvL~d~~ 46 (75)
T 4emk_B 15 KKVLIRLS-SGVDYKGILSCLDGYMNLALERTE 46 (75)
T ss_dssp SEEEEECT-TSCEEEEEEEEECTTCEEEEEEEE
T ss_pred CeEEEEEc-CCcEEEEEEEEEcCcceEEEccEE
Confidence 57888886 899999999999999999876654
No 365
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=38.77 E-value=61 Score=23.00 Aligned_cols=33 Identities=12% Similarity=0.144 Sum_probs=28.2
Q ss_pred ceEEEEEcCCC-cEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSP-TKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g-~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +| +.+.+++.++|...++.|=.+..
T Consensus 16 ~~v~V~lk-~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMK-GEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEET-TCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEe-CCCEEEEEEEEEECCcceEEEeeEEE
Confidence 57888886 88 99999999999999998877654
No 366
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=38.62 E-value=53 Score=25.52 Aligned_cols=33 Identities=9% Similarity=0.024 Sum_probs=28.6
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+.+.++|...+|.|=.+..
T Consensus 34 k~V~V~L~-dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 34 QRIQATFT-GGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEe-CCeEEEEEEEEEcCcccEEEeeEEE
Confidence 57888886 8999999999999999998876654
No 367
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=36.84 E-value=57 Score=25.46 Aligned_cols=34 Identities=24% Similarity=0.387 Sum_probs=29.5
Q ss_pred CceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 162 STFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 162 ~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
...+.|.+. +|+.+.+.+.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk-~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCR-NNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEEC-CCcEEEEEEEEeCCceEEEEeCEEE
Confidence 368899987 8899999999999999998877654
No 368
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=36.79 E-value=1e+02 Score=24.05 Aligned_cols=62 Identities=10% Similarity=0.088 Sum_probs=41.1
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEEEEecCCCC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQGG 227 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~~ 227 (385)
..+.|.+. ++..|.+++..+|...++.|=.+.... ..-....++...--|+.|..+.-|...
T Consensus 13 k~V~V~Lk-~g~~~~G~L~~~D~~MNlvL~d~~e~~--~~~~~~~lg~v~IRG~nI~~I~~pd~l 74 (119)
T 1b34_A 13 ETVTIELK-NGTQVHGTITGVDVSMNTHLKAVKMTL--KNREPVQLETLSIRGNNIRYFILPDSL 74 (119)
T ss_dssp CEEEEEET-TCCEEEEEEEEECTTCCEEEEEEEEEC--TTSCCEEEEEEEECGGGEEEEECCTTC
T ss_pred CEEEEEEc-CCCEEEEEEEEEcccceEEeccEEEec--CCCceeEcceEEEcCCeEEEEEecccc
Confidence 57888887 889999999999999999887765431 111222332211127777777776653
No 369
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=36.32 E-value=49 Score=24.82 Aligned_cols=33 Identities=9% Similarity=0.221 Sum_probs=28.7
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+.+.++|...++.|=....
T Consensus 21 k~V~V~Lk-~gr~~~G~L~~fD~~mNlVL~d~~E 53 (96)
T 3bw1_A 21 ERVYIKLR-GARTLVGTLQAFDSHCNIVLSDAVE 53 (96)
T ss_dssp SEEEEEEG-GGCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEC-CCcEEEEEEEEECCCCcEEEcCEEE
Confidence 57889987 8999999999999999998876654
No 370
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=35.69 E-value=1.1e+02 Score=21.49 Aligned_cols=33 Identities=6% Similarity=-0.026 Sum_probs=28.6
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. +|+.+.+++.++|...++.|=....
T Consensus 15 k~V~V~Lk-~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 15 KKLSLKLN-GGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CEEEEEET-TTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEC-CCcEEEEEEEEECCcceEEEeceEE
Confidence 56888887 8999999999999999998877654
No 371
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=35.42 E-value=1.3e+02 Score=21.92 Aligned_cols=61 Identities=15% Similarity=0.132 Sum_probs=39.7
Q ss_pred CceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEEEEecCC
Q 016641 162 STFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQ 225 (385)
Q Consensus 162 ~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~ 225 (385)
...+.|.+. +|+.+.+++.++|...++.|=.+.... +.-....++.----|+.|..++-|.
T Consensus 16 ~k~V~V~Lk-~g~~~~G~L~~~D~~mNlvL~d~~e~~--~g~~~~~lg~v~IRG~nI~~i~~~d 76 (86)
T 3s6n_F 16 GKPVMVKLK-WGMEYKGYLVSVDGYMNMQLANTEEYI--DGALSGHLGEVLIRCNNVLYIRGVE 76 (86)
T ss_dssp TSEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEEEE--TTEEEEEESSEEECGGGEEEEEECC
T ss_pred CCeEEEEEc-CCeEEEEEEEEEcCceEEEEeeEEEEc--CCceeeEccEEEEeCCeEEEEEeCC
Confidence 357888887 889999999999999999887765321 1112233332212266666666554
No 372
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=34.26 E-value=13 Score=36.50 Aligned_cols=40 Identities=8% Similarity=-0.100 Sum_probs=28.7
Q ss_pred hhcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 332 NNFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 332 ~~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
..+++|- +=+.|.-..++.|..++.||||||...||+.|.
T Consensus 288 a~l~lpv--nv~~ii~~~ENm~sg~A~rPgDVits~~GkTVE 327 (482)
T 3ij3_A 288 MLQQLPV--RLRLLIPAVENAIGSRSYRPGDVVQTRARKTIE 327 (482)
T ss_dssp HHTTCSS--EEEEEEEEEEECCSTTCCCTTCEEECTTSCEEE
T ss_pred HHcCCCc--eEEEEEEeeccCCCCCCCCCCCEEEeCCCCEEE
Confidence 3455653 223344455678888889999999999999864
No 373
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=33.52 E-value=1.1e+02 Score=20.76 Aligned_cols=37 Identities=14% Similarity=0.127 Sum_probs=28.1
Q ss_pred CCCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 160 ADSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 160 ~~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
.-.+.+...+..||+.|+|++...+.+.+-+.+++..
T Consensus 10 ~vGd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 10 KVGDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp CTTCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCCCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 3346677777679999999999998876777666654
No 374
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=33.51 E-value=1.5e+02 Score=22.02 Aligned_cols=34 Identities=21% Similarity=0.196 Sum_probs=28.8
Q ss_pred CceEEEEEcCCC-cEEEEEEEEecCCCCeEEEEecC
Q 016641 162 STFVLVRKHGSP-TKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 162 ~~~i~V~~~~~g-~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
...+.|.+. +| +.+.+++.++|...++.|=.+..
T Consensus 31 ~k~V~V~Lk-~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 31 NHRVGVKLK-FNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp TSEEEEEES-STTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CCEEEEEEc-CCCEEEEEEEEEEccccEEEEeeEEE
Confidence 367888887 78 99999999999999998776654
No 375
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=33.41 E-value=1.3e+02 Score=22.19 Aligned_cols=33 Identities=12% Similarity=0.153 Sum_probs=27.8
Q ss_pred ceEEEEEcCCCcEEEEEEEEecC-CCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGH-ECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~-~~DlAlLkv~~ 196 (385)
..+.|++. ||+.|.+.+..+|+ ...|.|+....
T Consensus 18 KeV~V~l~-dg~~y~G~l~tvDp~s~sIvL~n~~~ 51 (86)
T 1y96_A 18 KEVRVTAS-EKNEYKGWVLTTDPVSANIVLVNFLE 51 (86)
T ss_dssp CEEEEEET-TTEEEEEEEEEECTTTCCEEEEEECT
T ss_pred CEEEEEEc-CCCEEEEEEEEECCCceEEEEeeccc
Confidence 57888887 99999999999995 57898888733
No 376
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=33.05 E-value=48 Score=29.29 Aligned_cols=33 Identities=6% Similarity=0.009 Sum_probs=27.6
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
.++.|.+. |++++.+++..+|.+.+|.|=.+.+
T Consensus 15 KrV~V~Lk-dGRel~GtLkgFDq~MNLVL~Da~E 47 (231)
T 3pgw_B 15 YRMRCILQ-DGRIFIGTFKAFDKHMNLILCDCDE 47 (231)
T ss_pred CeEEEEEC-CCcEEEEEEEEEcccccEEecCEEE
Confidence 56888886 8999999999999999997765543
No 377
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=32.97 E-value=77 Score=24.26 Aligned_cols=62 Identities=13% Similarity=0.169 Sum_probs=37.6
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEEEEecCCC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQG 226 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~ 226 (385)
..+.|.+. +|+.+.+++.++|...++.|=.+..... +.-....++..---|+.|..+.-|..
T Consensus 27 k~V~V~Lk-~G~~~~G~L~~~D~~MNlvL~d~~e~~~-dg~~~~~lg~v~IRG~nI~~I~~pd~ 88 (105)
T 4emh_A 27 RPILVELK-NGETFNGHLENCDNYMNLTLREVIRTMP-DGDKFFRLPECYIRGNNIKYLRIQDE 88 (105)
T ss_dssp CEEEEEET-TSCEEEEEEEEECTTCCEEEEEEEEECT-TSCEEEEEEEEEECGGGEEEEEC---
T ss_pred CEEEEEEC-CCCEEEEEEEEEcCCceEEEEEEEEEcc-CCceeeEcCeEEEeCCeEEEEecCHH
Confidence 57888887 8899999999999999998877653210 01122223211112666666666543
No 378
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=32.81 E-value=16 Score=36.06 Aligned_cols=39 Identities=10% Similarity=0.164 Sum_probs=22.9
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
.++++- +=+-|.-..++.|..++.||||||...||+.|.
T Consensus 290 ~l~l~v--nv~~~i~~~ENm~sg~A~rPgDVits~~G~TVE 328 (486)
T 3pei_A 290 MLNLPV--NVVGVMGLAENAVDARSYRPGDVLKSMKGITVE 328 (486)
T ss_dssp HHTCSS--EEEEEEEEEEC------CCTTEEEECTTCCEEE
T ss_pred HcCCCc--EEEEEEEeeccCCCCCCCCCCCEEEeCCCcEEE
Confidence 355552 233344555688999999999999999999764
No 379
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=32.31 E-value=40 Score=34.05 Aligned_cols=33 Identities=21% Similarity=0.304 Sum_probs=23.8
Q ss_pred CceEEEeeCCCCHHhhhcCCCCEEEEECCEEcCChh
Q 016641 341 TGVLVNKINPLSDAHEILKKDDIILAFDGVPIANDG 376 (385)
Q Consensus 341 ~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~~~~ 376 (385)
.-++|.++..... .++.||.|++|||+++...-
T Consensus 96 G~i~V~dv~~~~s---~I~vGdEIlsING~pv~e~L 128 (583)
T 3dor_A 96 GRFYFVDIMTFSS---EIRVGDELLEVDGAPVQDVL 128 (583)
T ss_dssp SCEEEEEECSSCC---SSCTTCEEEEETTEEHHHHH
T ss_pred CcEEEEecccccc---CCCCCCEEEEECCccHHHHH
Confidence 3477776643322 49999999999999986543
No 380
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=31.95 E-value=1.3e+02 Score=20.99 Aligned_cols=36 Identities=17% Similarity=0.177 Sum_probs=30.6
Q ss_pred CCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCC
Q 016641 161 DSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESD 197 (385)
Q Consensus 161 ~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~ 197 (385)
..+.+..+.. ||..|+|++..++....-+++++...
T Consensus 16 vGddVLA~wt-DGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 16 EGQDVLARWS-DGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp TTCEEEEECT-TSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred CCCEEEEEEc-cCcEEEeEEEEEccCCcEEEEEEccC
Confidence 4466777764 99999999999999999999999765
No 381
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=31.29 E-value=16 Score=36.34 Aligned_cols=40 Identities=18% Similarity=0.141 Sum_probs=28.5
Q ss_pred hhcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 332 NNFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 332 ~~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
..+++|- +=+-|.-..++.|..++.||||||...||+.|.
T Consensus 321 a~l~lpv--nv~~~i~~~ENm~sg~A~rPgDVits~~GkTVE 360 (515)
T 3kzw_A 321 SRLQLPV--NIVGVLACAENMINEASMKPDDVFTALSGETVE 360 (515)
T ss_dssp HHTTCSC--EEEEEEEEEEECCCTTCCCTTCEEECTTSCEEE
T ss_pred HHcCCCc--eEEEEEEeeccCCCCCCCCCCCEEEeCCCCEEE
Confidence 3455553 233344455678888889999999999999773
No 382
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=30.90 E-value=12 Score=37.15 Aligned_cols=39 Identities=8% Similarity=0.064 Sum_probs=28.0
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
.++++- +=+-|.-..++.|..++.||||||.+.||+.|.
T Consensus 309 ~l~l~v--nV~~~i~~~ENm~sg~A~rPgDVits~~GkTVE 347 (503)
T 1gyt_A 309 ELQLPI--NVIGVLAGCENMPGGRAYRPGDVLTTMSGQTVE 347 (503)
T ss_dssp HHTCSS--EEEEEEEEEEECCSTTCCCTTCEEECTTSCEEE
T ss_pred HcCCCe--eEEEEEEeeccCCCCCCCCCCCEEEeCCCcEEE
Confidence 355552 223344455678888889999999999999774
No 383
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=30.61 E-value=17 Score=36.02 Aligned_cols=39 Identities=15% Similarity=0.123 Sum_probs=27.7
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
.++++- +=+-|.-..++.|..++.||||||...||+.|.
T Consensus 301 ~l~l~v--nv~~~i~~~ENm~sg~A~rPgDVit~~~G~TVE 339 (490)
T 3jru_B 301 KAELPI--NLVVVVPAVENAIDGNAYRPSDVITSMSGKTIE 339 (490)
T ss_dssp HTTCSS--EEEEEEEEEEECCSTTCCCTTCEEECTTSCEEE
T ss_pred HcCCCc--EEEEEEEeeccCCCCCCCCCCCEEEecCCcEEE
Confidence 355553 223344455678888889999999999999773
No 384
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=30.43 E-value=14 Score=36.48 Aligned_cols=39 Identities=15% Similarity=0.113 Sum_probs=27.7
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
.++++- +=+.|.-..++.|..++.||||||...||+.|.
T Consensus 289 ~l~l~v--nv~~~i~~~ENm~sg~A~rPgDVits~~GkTVE 327 (484)
T 1lam_A 289 KLDLPI--NIVGLAPLCENMPSGKANKPGDVVRARNGKTIQ 327 (484)
T ss_dssp HTTCSS--EEEEEEEEEEECCSTTSCCTTEEEECTTSCEEE
T ss_pred HcCCCe--eEEEEEEeeccCCCCCCCCCCCEEEeCCCcEEE
Confidence 355553 223344455678888889999999999999863
No 385
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=30.09 E-value=17 Score=35.93 Aligned_cols=29 Identities=24% Similarity=0.138 Sum_probs=23.7
Q ss_pred EEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 345 VNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 345 V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
+.-..++.|..++.||||||...||+.|.
T Consensus 301 ~l~~~ENm~sg~A~rPgDVits~~GkTVE 329 (491)
T 2hc9_A 301 CLCIVENNVSPIANKPDDIIKMLSGKTVE 329 (491)
T ss_dssp EEEEEEECCSTTSCCTTCEEECTTSCEEE
T ss_pred EEEeeecCCCCCCCCCCCEEEeCCCcEEE
Confidence 44455678888889999999999999873
No 386
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=27.70 E-value=17 Score=36.12 Aligned_cols=39 Identities=10% Similarity=0.111 Sum_probs=27.8
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
.++++- +=+-|.-..++.|..++.||||||...||+.|.
T Consensus 306 ~l~l~v--nv~~~i~~~ENm~~g~A~rPgDVit~~~G~TVE 344 (497)
T 3h8g_F 306 ELQLPV--NLVCLLACAENMPSGGATRPGDIVTTMSGQTVE 344 (497)
T ss_dssp HHTCSS--EEEEEEEEEEECCSTTSCCTTEEEECTTSCEEE
T ss_pred HcCCCe--EEEEEEEeeccCCCCCCCCCCCEEEeCCCcEEE
Confidence 345552 223344455678888889999999999999764
No 387
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=26.44 E-value=17 Score=36.22 Aligned_cols=29 Identities=21% Similarity=0.243 Sum_probs=23.3
Q ss_pred EEeeCCCCHHhhhcCCCCEEEEECCEEcC
Q 016641 345 VNKINPLSDAHEILKKDDIILAFDGVPIA 373 (385)
Q Consensus 345 V~~V~~~spA~~aL~~GDiI~~vng~~i~ 373 (385)
|.-..++.|..++.||||||...||+.|.
T Consensus 343 vi~~~ENm~sg~A~rPgDVit~~~GkTVE 371 (528)
T 3kr4_A 343 LSAVCENMVSKNSYRPGDIITASNGKTIE 371 (528)
T ss_dssp EEEEEEECCSTTSCCTTCEEECTTSCEEE
T ss_pred EEEeeccCCCCCCCCCCCEEEeCCCcEEE
Confidence 34445677888889999999999999863
No 388
>2e5q_A PHD finger protein 19; tudor domain, isoform B, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.42 E-value=1.6e+02 Score=20.28 Aligned_cols=36 Identities=17% Similarity=0.316 Sum_probs=30.0
Q ss_pred CCceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCC
Q 016641 161 DSTFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESD 197 (385)
Q Consensus 161 ~~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~ 197 (385)
..+.+..+.. ||.-|.+++..++....-+++++...
T Consensus 10 eGqdVLarWs-DGlfYlgtV~kV~~~~~~ClV~FeD~ 45 (63)
T 2e5q_A 10 EGQYVLCRWT-DGLYYLGKIKRVSSSKQSCLVTFEDN 45 (63)
T ss_dssp TTCEEEEECT-TSCEEEEEECCCCSTTSEEEEEETTS
T ss_pred cCCEEEEEec-CCCEEEEEEEEEecCCCEEEEEEccC
Confidence 3456667765 99999999999999999999999765
No 389
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=26.17 E-value=17 Score=36.18 Aligned_cols=38 Identities=13% Similarity=0.073 Sum_probs=27.0
Q ss_pred hcCCCCccCceEEEeeCCCCHHhhhcCCCCEEEEECCEEc
Q 016641 333 NFGMRSEVTGVLVNKINPLSDAHEILKKDDIILAFDGVPI 372 (385)
Q Consensus 333 ~~g~~~~~~Gv~V~~V~~~spA~~aL~~GDiI~~vng~~i 372 (385)
.+++|- +=+.|.-..++.|..++.||||||...||+.|
T Consensus 329 ~l~lpv--nV~~vl~~~ENm~sg~A~rPgDVits~~GkTV 366 (522)
T 4efd_A 329 RLQQPV--QLSCTLCLAENAIGPKSYRNDDIIVMKSGKTV 366 (522)
T ss_dssp HHTCSE--EEEEEEEEEECCC-CCSTTTTEEEECTTSCEE
T ss_pred HcCCCc--eEEEEEEEeccCCCCCCCCCCCEEEecCCcEE
Confidence 355653 22334445568888889999999999999976
No 390
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=25.46 E-value=62 Score=25.40 Aligned_cols=32 Identities=6% Similarity=0.124 Sum_probs=27.0
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEec
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVE 195 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~ 195 (385)
..+.|.+. +|+.+.+++.++|...++.|=.+.
T Consensus 39 k~V~V~Lk-~Gr~~~G~L~~fD~~mNlVL~d~~ 70 (121)
T 2fwk_A 39 NRIYVVMK-GDKEFSGVLRGFDEYVNMVLDDVQ 70 (121)
T ss_dssp SBCEEEET-TTEEECCEEEEECTTCCEEEESCC
T ss_pred CeEEEEEC-CCcEEEEEEEEEcccCCeEeceEE
Confidence 46888886 899999999999999999765543
No 391
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=25.23 E-value=49 Score=22.95 Aligned_cols=17 Identities=24% Similarity=0.610 Sum_probs=13.1
Q ss_pred CCccee-eCCEEEEEEee
Q 016641 266 SGGPAI-MGNKVAGVAFQ 282 (385)
Q Consensus 266 SGGPL~-~~G~vVGI~s~ 282 (385)
-|+-++ .+|+++||.+.
T Consensus 23 i~~~~V~d~~~lvGIvT~ 40 (70)
T 3ghd_A 23 AGSAVVMEGDEILGVVTE 40 (70)
T ss_dssp CSEEEEEETTEEEEEEEH
T ss_pred CCEEEEEECCEEEEEEEH
Confidence 345555 89999999985
No 392
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=24.47 E-value=1.2e+02 Score=24.08 Aligned_cols=57 Identities=11% Similarity=0.177 Sum_probs=38.3
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCCcccccceeeecCCcccCCCeEEEEecCCC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESDEFWEGMHFLELGDIPFLQQAVAVVGYPQG 226 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~~~~~~~~~l~l~~~~~~G~~V~~iG~p~~ 226 (385)
..+.|.+. +|+.+.+++.++|...++.|=.+.... . -.++..---|+.|..+.-+..
T Consensus 11 k~V~V~Lk-~G~~~~G~L~~~D~~MNlvL~d~~E~~---~---~~lg~v~IRG~nI~~I~~~d~ 67 (130)
T 1m5q_A 11 REVQVVLS-NGEVYKGVLHAVDNQLNIVLANASNKA---G---EKFNRVFIMYRYIVHIDSTER 67 (130)
T ss_dssp SEEEEEET-TSCEEEEEEEEECTTCCEEEEEEECTT---C---CEEEEEEECGGGEEEEEECCC
T ss_pred CeEEEEEC-CCcEEEEEEEEEcccceeEEeeEEEEc---C---CEeceEEEeCCeEEEEEcCCc
Confidence 56888887 889999999999999999887776532 1 112111112666666665543
No 393
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=23.31 E-value=1.3e+02 Score=23.73 Aligned_cols=33 Identities=9% Similarity=0.164 Sum_probs=28.6
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
..+.|.+. ++..|.+++..+|...++.|-.+..
T Consensus 16 k~V~VeLk-nG~~~~G~L~~~D~~MNi~L~dv~e 48 (126)
T 2y9a_D 16 HIVTCETN-TGEVYRGKLIEAEDNMNCQMSNITV 48 (126)
T ss_dssp CEEEEEES-SCCEEEEEEEEECTTSCEEEEEEEE
T ss_pred CEEEEEEC-CCcEEEEEEEEEcCceEEEEeeEEE
Confidence 56888887 8899999999999999998887754
No 394
>1mhn_A SurviVal motor neuron protein; SMN, SMA, spinal muscular atrophy, RNA binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 PDB: 4a4e_A* 4a4g_A*
Probab=22.49 E-value=1.8e+02 Score=19.32 Aligned_cols=35 Identities=6% Similarity=0.090 Sum_probs=26.0
Q ss_pred CceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 162 STFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 162 ~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
.+.+...+..||..|+|++...+...+-+.+++..
T Consensus 7 G~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~f~D 41 (59)
T 1mhn_A 7 GDKCSAIWSEDGCIYPATIASIDFKRETCVVVYTG 41 (59)
T ss_dssp TCEEEEECTTTSCEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEc
Confidence 45566666668999999999988766667666644
No 395
>2dig_A Lamin-B receptor; tudor domain, integral nuclear envelope inner membrane protein, nuclear protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.34.9.1
Probab=22.45 E-value=2e+02 Score=20.01 Aligned_cols=36 Identities=17% Similarity=0.150 Sum_probs=30.7
Q ss_pred CceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCC
Q 016641 162 STFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESD 197 (385)
Q Consensus 162 ~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~ 197 (385)
.+.+.-+..+|...|++++..++...++.+++++..
T Consensus 16 gd~VmaRW~Gd~~yYparItSits~~~~Y~VkfKdg 51 (68)
T 2dig_A 16 GEVVRGRWPGSSLYYEVEILSHDSTSQLYTVKYKDG 51 (68)
T ss_dssp SCEEEEECTTTCCEEEEEEEEEETTTTEEEEECTTS
T ss_pred CCEEEEEccCCccceEEEEEEeccCCceEEEEecCC
Confidence 456677777888999999999999999999999874
No 396
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=22.04 E-value=1.1e+02 Score=21.99 Aligned_cols=35 Identities=20% Similarity=0.264 Sum_probs=29.1
Q ss_pred CceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCC
Q 016641 162 STFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESD 197 (385)
Q Consensus 162 ~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~ 197 (385)
.+.+.++.. ||.-|.++++.++...+-++++++..
T Consensus 30 GeDVLarws-DGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 30 GQDVLARWT-DGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp TCEEEBCCT-TSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEec-CCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 455666554 99999999999999999999999765
No 397
>2l8d_A Lamin-B receptor; DNA binding protein; NMR {Gallus gallus}
Probab=21.99 E-value=2e+02 Score=19.91 Aligned_cols=36 Identities=22% Similarity=0.223 Sum_probs=30.9
Q ss_pred CceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecCC
Q 016641 162 STFVLVRKHGSPTKYRAQVEAVGHECDLAILIVESD 197 (385)
Q Consensus 162 ~~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~~ 197 (385)
.+.+.-+..++..-|++++..++...++.+++++..
T Consensus 13 gd~VmaRW~Gd~~yYparI~Si~s~~~~Y~V~fKdg 48 (66)
T 2l8d_A 13 GEVVMGRWPGSVLYYEVQVTSYDDASHLYTVKYKDG 48 (66)
T ss_dssp SCEEEEECTTSSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEcCCCccceEEEEEEeccCCceEEEEecCC
Confidence 456677778888999999999999999999999874
No 398
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=20.26 E-value=41 Score=28.83 Aligned_cols=39 Identities=23% Similarity=0.538 Sum_probs=24.7
Q ss_pred CCCCCCccee-eCCEEEEEEeeecC--CC-CceEEEEecchHHH
Q 016641 262 NPGNSGGPAI-MGNKVAGVAFQNLS--GA-ENIGYIIPVPVIKH 301 (385)
Q Consensus 262 ~~G~SGGPL~-~~G~vVGI~s~~~~--~~-~~~~~aip~~~i~~ 301 (385)
-.|.||+||+ ..|++||+--...- +. ..+-| +|.+.+..
T Consensus 146 ykGssgaPllCe~gh~vGly~~~VC~rG~ik~~~f-~p~e~~~~ 188 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRAAVCTRGVAKAVDF-IPVENLET 188 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEEEEEETTEEEEEEE-EEHHHHHH
T ss_pred EeCCCCCceeccCCceeeEEEEEEecCCceeeeEe-eecccccc
Confidence 4688999999 99999998543211 11 12334 77665443
No 399
>3s6w_A Tudor domain-containing protein 3; methylated arginine recognize, ISO-propanol, transcri; 1.78A {Homo sapiens} PDB: 3pmt_A*
Probab=20.21 E-value=1.9e+02 Score=18.72 Aligned_cols=34 Identities=21% Similarity=0.119 Sum_probs=23.3
Q ss_pred ceEEEEEcCCCcEEEEEEEEecCCCCeEEEEecC
Q 016641 163 TFVLVRKHGSPTKYRAQVEAVGHECDLAILIVES 196 (385)
Q Consensus 163 ~~i~V~~~~~g~~~~a~v~~~d~~~DlAlLkv~~ 196 (385)
+.+...+..||..|+|++...+...+-+.++.-.
T Consensus 6 ~~c~A~~s~Dg~wYrA~I~~i~~~~~~~~V~fvD 39 (54)
T 3s6w_A 6 DECFALYWEDNKFYRAEVEALHSSGMTAVVKFID 39 (54)
T ss_dssp CEEEEEETTTTEEEEEEEEEC--CCSEEEEEETT
T ss_pred CEEEEEECCCCCEEEEEEEEEeCCCCEEEEEEEc
Confidence 4455666669999999999988766666665543
Done!