BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016646
(385 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P73548|CDSA_SYNY3 Phosphatidate cytidylyltransferase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=cdsA PE=3 SV=1
Length = 293
Score = 158 bits (400), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 104/272 (38%), Positives = 143/272 (52%), Gaps = 37/272 (13%)
Query: 133 VVLAGGWVFTVCFAAAVFVGAREYFELVRSRGIAAGMTPPPRYVSRVCSVICAFMPILTL 192
+++ GGW F+ A +++G REYF++VR++GIA +S + + P LT
Sbjct: 19 LLILGGWYFSAAIALVIYLGLREYFQMVRAKGIAPA-AKTTMVLSLMLLLSATVTPHLT- 76
Query: 193 YFGQIDVSVTFAAFVVAMALLLQRGNPRFAQLSSTIFGLFYCGYLPCFWVKLRCG----- 247
D ++ LL Q A +S+++ GLFY GYLP +WV+LR G
Sbjct: 77 -----DAFFPLTGALICFYLLFQPKMATIADISTSLLGLFYGGYLPSYWVRLRLGDGAVN 131
Query: 248 ---LSAPALN--------------TGIGVS-------WPILLGGLPHWTAFGRTQLTSIS 283
L P LN TG+ V+ W +G GRT+L+ IS
Sbjct: 132 PMGLHLP-LNGFWPESWAHPENFPTGLLVTILAFACIWAADIGAYIMGKWLGRTRLSDIS 190
Query: 284 PKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFGDLTESMIKRDA 343
PKKT EG++ G+GG + V+ + WP + + + G L S+ GDLTESM+KRDA
Sbjct: 191 PKKTVEGSLWGVGGSLLVGVLGAWYLQWPYWEITGALLGLLIGIVSLLGDLTESMMKRDA 250
Query: 344 GVKDSGSLIPGHGGILDRVDSYIFTGALAYSF 375
GVKDSG LIPGHGGILDR DSY+FT L Y F
Sbjct: 251 GVKDSGQLIPGHGGILDRTDSYVFTAPLVYYF 282
>sp|Q9ZML7|CDSA_HELPJ Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
J99) GN=cdsA PE=3 SV=1
Length = 266
Score = 83.2 bits (204), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 69/111 (62%), Gaps = 6/111 (5%)
Query: 275 GRTQLTSISPKKTWEGTIVG--LGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG 332
G+T T+ SP KT EG ++G L + + V + K+ A++F FL +VFG
Sbjct: 151 GKTPFTATSPNKTLEGALIGVVLASVLGSFVGMGKL---SGGFLMALLFSFLIALMAVFG 207
Query: 333 DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY 383
DL ES +KR GVKDSG ++PGHGG+LDR+DS +F GAL+ + FL ++
Sbjct: 208 DLYESYLKRKVGVKDSGKILPGHGGVLDRLDSMLF-GALSLHVLLYFLEIW 257
>sp|P44937|CDSA_HAEIN Phosphatidate cytidylyltransferase OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=cdsA PE=3
SV=1
Length = 288
Score = 80.1 bits (196), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 61/101 (60%), Gaps = 13/101 (12%)
Query: 273 AFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCW--------PRYLPSAIVFGF 323
AFG+ +L +SP K+WEG I GG I T +VL+ IF R + I+
Sbjct: 176 AFGKRKLAPKVSPGKSWEGVI---GGLI-TALVLAFIFIHFSNNTLVGDRNITGFIILSV 231
Query: 324 LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
SV GDLTESM KR++GVKDS LIPGHGG+LDR+DS
Sbjct: 232 ATVAISVLGDLTESMFKRESGVKDSSQLIPGHGGVLDRIDS 272
>sp|P0ABG3|CDSA_SHIFL Phosphatidate cytidylyltransferase OS=Shigella flexneri GN=cdsA
PE=3 SV=2
Length = 285
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA----IVFGFLNFFG 328
FG+ +L +SP KTW+G I GL AT V+S + L A ++ +
Sbjct: 175 FGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVTLLICSIVAALA 230
Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 231 SVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266
>sp|P0ABG1|CDSA_ECOLI Phosphatidate cytidylyltransferase OS=Escherichia coli (strain K12)
GN=cdsA PE=1 SV=2
Length = 285
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA----IVFGFLNFFG 328
FG+ +L +SP KTW+G I GL AT V+S + L A ++ +
Sbjct: 175 FGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVTLLICSIVAALA 230
Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 231 SVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266
>sp|P0ABG2|CDSA_ECO57 Phosphatidate cytidylyltransferase OS=Escherichia coli O157:H7
GN=cdsA PE=3 SV=2
Length = 285
Score = 79.7 bits (195), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 60/96 (62%), Gaps = 9/96 (9%)
Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSA----IVFGFLNFFG 328
FG+ +L +SP KTW+G I GL AT V+S + L A ++ +
Sbjct: 175 FGKHKLAPKVSPGKTWQGFIGGL----ATAAVISWGYGMWANLDVAPVTLLICSIVAALA 230
Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
SV GDLTESM KR+AG+KDSG LIPGHGGILDR+DS
Sbjct: 231 SVLGDLTESMFKREAGIKDSGHLIPGHGGILDRIDS 266
>sp|O25004|CDSA_HELPY Phosphatidate cytidylyltransferase OS=Helicobacter pylori (strain
ATCC 700392 / 26695) GN=cdsA PE=3 SV=1
Length = 266
Score = 78.6 bits (192), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/111 (42%), Positives = 66/111 (59%), Gaps = 6/111 (5%)
Query: 275 GRTQLTSISPKKTWEGTIVG--LGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG 332
G+T T SP KT EG ++G L + + V + K+ A+ F FL +VFG
Sbjct: 151 GKTPFTPTSPNKTLEGALIGVVLASVLGSFVGMGKL---SGGFFMALFFSFLIALVAVFG 207
Query: 333 DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLPLY 383
DL ES +KR G+KDSG ++PGHGG+LDR+DS +F GAL + FL ++
Sbjct: 208 DLYESYLKRKVGIKDSGKILPGHGGVLDRLDSMLF-GALGLHALLYFLEIW 257
>sp|Q59640|CDSA_PSEAE Phosphatidate cytidylyltransferase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=cdsA PE=3 SV=2
Length = 271
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 273 AFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNF-FGSV 330
AFG+ +L +SP K+WEG GL +A T+ + W + G F S+
Sbjct: 158 AFGKRKLAPRVSPGKSWEGVYGGLAASLAITLAVGLYRGWSLGALLLALLGAALVVFVSI 217
Query: 331 FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDS 364
GDLTESM KR +G+KDS +L+PGHGG+LDR+DS
Sbjct: 218 VGDLTESMFKRQSGIKDSSNLLPGHGGVLDRIDS 251
>sp|P63758|CDSA_MYCTU Phosphatidate cytidylyltransferase OS=Mycobacterium tuberculosis
GN=cdsA PE=3 SV=1
Length = 306
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 121/307 (39%), Gaps = 47/307 (15%)
Query: 102 KSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVR 161
K + + + LR I GL IG+ + V++ V+ A A V E +R
Sbjct: 20 KQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWVAIVAVATLVATHEVVRRLR 79
Query: 162 SRGIAAGMTPPPRYVSRVCSVICAFMPI--LTLYFGQIDVSVTFAAFVVAMA---LLLQR 216
G Y+ V ++ LT FG + F VV L +Q
Sbjct: 80 EAG----------YLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVCMIWRLFMQD 129
Query: 217 GNPR------------FAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPIL 264
R + +S+T+F WV L C A + G W
Sbjct: 130 SVTRPTTGGAPSPGNYLSDVSATVF--------LAVWVPLFCSFGAMLVYPENGSGWVFC 181
Query: 265 L---------GGLPHWTAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY 314
+ GG FG+ + +ISPKK+WEG G C T +++ F +
Sbjct: 182 MMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEG-FAGSLVCGITATIITATFLVGKT 240
Query: 315 LPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYS 374
+ G L + GDL ES +KRD G+KD G L+PGHGG++DR+D I A+A
Sbjct: 241 PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDG-ILPSAVAAW 299
Query: 375 FVKTFLP 381
V T LP
Sbjct: 300 IVLTLLP 306
>sp|P63759|CDSA_MYCBO Phosphatidate cytidylyltransferase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=cdsA PE=3 SV=1
Length = 306
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 84/307 (27%), Positives = 121/307 (39%), Gaps = 47/307 (15%)
Query: 102 KSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFAAAVFVGAREYFELVR 161
K + + + LR I GL IG+ + V++ V+ A A V E +R
Sbjct: 20 KQQPATETSRAGRDLRAAIVVGLSIGLVLIAVLVFVPRVWVAIVAVATLVATHEVVRRLR 79
Query: 162 SRGIAAGMTPPPRYVSRVCSVICAFMPI--LTLYFGQIDVSVTFAAFVVAMA---LLLQR 216
G Y+ V ++ LT FG + F VV L +Q
Sbjct: 80 EAG----------YLIPVIPLLIGGQAAVWLTWPFGAVGALAGFGGMVVVCMIWRLFMQD 129
Query: 217 GNPR------------FAQLSSTIFGLFYCGYLPCFWVKLRCGLSAPALNTGIGVSWPIL 264
R + +S+T+F WV L C A + G W
Sbjct: 130 SVTRPTTGGAPSPGNYLSDVSATVF--------LAVWVPLFCSFGAMLVYPENGSGWVFC 181
Query: 265 L---------GGLPHWTAFGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY 314
+ GG FG+ + +ISPKK+WEG G C T +++ F +
Sbjct: 182 MMIAVIASDVGGYAVGVLFGKHPMVPTISPKKSWEG-FAGSLVCGITATIITATFLVGKT 240
Query: 315 LPSAIVFGFLNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYS 374
+ G L + GDL ES +KRD G+KD G L+PGHGG++DR+D I A+A
Sbjct: 241 PWIGALLGVLFVLTTALGDLVESQVKRDLGIKDMGRLLPGHGGLMDRLDG-ILPSAVAAW 299
Query: 375 FVKTFLP 381
V T LP
Sbjct: 300 IVLTLLP 306
>sp|O31752|CDSA_BACSU Phosphatidate cytidylyltransferase OS=Bacillus subtilis (strain
168) GN=cdsA PE=3 SV=1
Length = 269
Score = 74.7 bits (182), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/103 (44%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 281 SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFL-NFFGSVFG---DLTE 336
ISP KT EG G I +VL+ IF LP ++ L F SVFG DL E
Sbjct: 170 EISPNKTVEG----FAGGIVIALVLATIFQLVAQLPIPYIYLLLITLFLSVFGQLGDLVE 225
Query: 337 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTF 379
S +KR VKDSG+++PGHGGILDR DS++F Y + F
Sbjct: 226 SALKRHYDVKDSGNILPGHGGILDRFDSFLFVMPFLYFLLALF 268
>sp|P76091|YNBB_ECOLI Uncharacterized protein YnbB OS=Escherichia coli (strain K12)
GN=ynbB PE=3 SV=1
Length = 298
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 62/106 (58%), Gaps = 9/106 (8%)
Query: 276 RTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLP----SAIVFGFLNFFGSVF 331
R + +SP KT EG +GG I T++++ + P P A++ G L
Sbjct: 194 RKVVPKVSPGKTLEGL---MGGVI--TIMIASLIIGPLLTPLNTLQALLAGLLIGISGFC 248
Query: 332 GDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVK 377
GD+ S IKRD GVKDSG L+PGHGG+LDR+DS IFT + + F++
Sbjct: 249 GDVVMSAIKRDIGVKDSGKLLPGHGGLLDRIDSLIFTAPVFFYFIR 294
>sp|Q9CBU1|CDSA_MYCLE Phosphatidate cytidylyltransferase OS=Mycobacterium leprae (strain
TN) GN=cdsA PE=3 SV=1
Length = 312
Score = 72.4 bits (176), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 60/109 (55%), Gaps = 3/109 (2%)
Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG 332
FG+ L ISP K+WEG G C T +L+ F + + F+ G
Sbjct: 206 FGKHPLVPRISPNKSWEG-FAGSLVCGTTATILTATFLAGKTPWVGALLSFVLVLTCTLG 264
Query: 333 DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFLP 381
DL ES +KRD G+KD G L+PGHGG++DR+D + + +A++ + T LP
Sbjct: 265 DLVESQVKRDLGIKDMGRLLPGHGGLMDRLDGVLPSAVVAWTML-TLLP 312
>sp|Q9X1B7|CDSA_THEMA Phosphatidate cytidylyltransferase OS=Thermotoga maritima (strain
ATCC 43589 / MSB8 / DSM 3109 / JCM 10099) GN=cdsA PE=3
SV=1
Length = 270
Score = 71.2 bits (173), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 14/110 (12%)
Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLS---------KIFCWPRYLPSAIVFGF 323
FGRT+++ SP+K+ EG I G G + T + + + +LP A
Sbjct: 154 FGRTRISPRYSPRKSLEGVIGGFLGVVIYTFLYRLVVNDLLSVNVISFRTFLPFAATVAI 213
Query: 324 LNFFGSVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAY 373
++ FGD+ ES +KR GVKDSG +PGHGG+LDR+D +F ++Y
Sbjct: 214 MD----TFGDIFESALKRHYGVKDSGKTLPGHGGMLDRIDGLLFVAPVSY 259
>sp|Q4L5W3|CDSA_STAHJ Phosphatidate cytidylyltransferase OS=Staphylococcus haemolyticus
(strain JCSC1435) GN=cdsA PE=3 SV=1
Length = 260
Score = 66.6 bits (161), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/92 (45%), Positives = 53/92 (57%), Gaps = 10/92 (10%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVVLS-----KIFCWPRYLPSAIVFGFLNFFGSVFGDLTE 336
ISP KT EG I GL + +V+ + W L + I L+ FG + GDL E
Sbjct: 163 ISPNKTIEGFIGGLICSLIVPIVMLFFVDFNLNIWLLLLVTII----LSIFGQL-GDLVE 217
Query: 337 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
S KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 218 SGFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q7A121|CDSA_STAAW Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MW2) GN=cdsA PE=3 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVV-LSKIFCWPRYLPSAIVFG---FLNFFGSVFGDLTES 337
ISP KT EG I GG + +V L+ ++ + I+ G L+ FG + GDL ES
Sbjct: 163 ISPNKTIEGFI---GGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQL-GDLVES 218
Query: 338 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 219 GFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q6G9V2|CDSA_STAAS Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MSSA476) GN=cdsA PE=3 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVV-LSKIFCWPRYLPSAIVFG---FLNFFGSVFGDLTES 337
ISP KT EG I GG + +V L+ ++ + I+ G L+ FG + GDL ES
Sbjct: 163 ISPNKTIEGFI---GGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQL-GDLVES 218
Query: 338 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 219 GFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q6GHH4|CDSA_STAAR Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
MRSA252) GN=cdsA PE=3 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVV-LSKIFCWPRYLPSAIVFG---FLNFFGSVFGDLTES 337
ISP KT EG I GG + +V L+ ++ + I+ G L+ FG + GDL ES
Sbjct: 163 ISPNKTIEGFI---GGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQL-GDLVES 218
Query: 338 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 219 GFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q7A5Y4|CDSA_STAAN Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
N315) GN=cdsA PE=3 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVV-LSKIFCWPRYLPSAIVFG---FLNFFGSVFGDLTES 337
ISP KT EG I GG + +V L+ ++ + I+ G L+ FG + GDL ES
Sbjct: 163 ISPNKTIEGFI---GGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQL-GDLVES 218
Query: 338 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 219 GFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q99UL1|CDSA_STAAM Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
Mu50 / ATCC 700699) GN=cdsA PE=3 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVV-LSKIFCWPRYLPSAIVFG---FLNFFGSVFGDLTES 337
ISP KT EG I GG + +V L+ ++ + I+ G L+ FG + GDL ES
Sbjct: 163 ISPNKTIEGFI---GGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQL-GDLVES 218
Query: 338 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 219 GFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q5HGH0|CDSA_STAAC Phosphatidate cytidylyltransferase OS=Staphylococcus aureus (strain
COL) GN=cdsA PE=3 SV=1
Length = 260
Score = 66.2 bits (160), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 8/91 (8%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVV-LSKIFCWPRYLPSAIVFG---FLNFFGSVFGDLTES 337
ISP KT EG I GG + +V L+ ++ + I+ G L+ FG + GDL ES
Sbjct: 163 ISPNKTIEGFI---GGLFCSLIVPLAMLYFVDFNMNVWILLGVTLILSLFGQL-GDLVES 218
Query: 338 MIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 219 GFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q1RII7|CDSA_RICBR Phosphatidate cytidylyltransferase OS=Rickettsia bellii (strain
RML369-C) GN=cdsA PE=3 SV=1
Length = 231
Score = 65.5 bits (158), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 52/98 (53%), Gaps = 6/98 (6%)
Query: 282 ISPKKTWEGTIVGL--GGCIATTVVLSKIFCWPRYLPSAIVFGFLN----FFGSVFGDLT 335
ISPKKTW G I G+ G +AT + F Y S ++ F+ + DL
Sbjct: 127 ISPKKTWSGLITGILSAGLVATLISFIPSFYIENYYFSNRIYLFIISCTLALTAQLSDLF 186
Query: 336 ESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAY 373
S KR +KDSG++IPGHGG+LDR DS I T + +
Sbjct: 187 ISYFKRKFNIKDSGNIIPGHGGVLDRFDSIILTAPILF 224
>sp|Q8CST9|CDSA_STAES Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 12228) GN=cdsA PE=3 SV=1
Length = 260
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVVLS-----KIFCWPRYLPSAIVFGFLNFFGSVFGDLTE 336
ISP KT EG G+ I +V+ + W L + + L+ FG + GDL E
Sbjct: 163 ISPNKTIEGFFGGILCSILVPLVMQMFVDLHMNIWLLLLVTIV----LSMFGQL-GDLVE 217
Query: 337 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
S KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 218 SGFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q5HPT0|CDSA_STAEQ Phosphatidate cytidylyltransferase OS=Staphylococcus epidermidis
(strain ATCC 35984 / RP62A) GN=cdsA PE=3 SV=1
Length = 260
Score = 64.3 bits (155), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVVLS-----KIFCWPRYLPSAIVFGFLNFFGSVFGDLTE 336
ISP KT EG G+ I +V+ + W L + + L+ FG + GDL E
Sbjct: 163 ISPNKTIEGFFGGILCSILVPLVMQMFVDLHMNIWLLLLVTIV----LSMFGQL-GDLVE 217
Query: 337 SMIKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
S KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 218 SGFKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q68WV5|CDSA_RICTY Phosphatidate cytidylyltransferase OS=Rickettsia typhi (strain ATCC
VR-144 / Wilmington) GN=cdsA PE=3 SV=1
Length = 228
Score = 63.2 bits (152), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 273 AFGRTQLT-SISPKKTWEGTIVGL--GGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGS 329
F T+L ISPKKTW G I+G G IA V L + Y S ++ F+
Sbjct: 115 TFKGTKLAPKISPKKTWTGLIIGTISAGLIAVLVSLIPYYHIENYYFSNKIYLFI--ISC 172
Query: 330 VFG------DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTG 369
+ DL S KR +KDSG +IPGHGG+LDR DS I T
Sbjct: 173 ILALIAQSSDLFISYFKRKFNIKDSGHIIPGHGGVLDRFDSIILTA 218
>sp|Q49X46|CDSA_STAS1 Phosphatidate cytidylyltransferase OS=Staphylococcus saprophyticus
subsp. saprophyticus (strain ATCC 15305 / DSM 20229)
GN=cdsA PE=3 SV=1
Length = 260
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 6/90 (6%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG---DLTESM 338
ISP KT EG + GG I + +V + + + + + + S+FG DL ES
Sbjct: 163 ISPNKTVEGFV---GGLICSLIVPLVMMIFVDFNIALWLLLIITIILSMFGQLGDLVESG 219
Query: 339 IKRDAGVKDSGSLIPGHGGILDRVDSYIFT 368
KR GVKDSG ++PGHGGILDR DS++F
Sbjct: 220 FKRHFGVKDSGRILPGHGGILDRFDSFMFV 249
>sp|Q92I31|CDSA_RICCN Phosphatidate cytidylyltransferase OS=Rickettsia conorii (strain
ATCC VR-613 / Malish 7) GN=cdsA PE=3 SV=1
Length = 230
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 50/99 (50%), Gaps = 6/99 (6%)
Query: 281 SISPKKTWEGTIVGL--GGCIATTVVLSKIFCWPRYLPSAIVFGFLN----FFGSVFGDL 334
+SPKKTW G + G+ G +A V F Y S ++ F+ + DL
Sbjct: 126 KLSPKKTWSGLVTGVLSAGLVAVLVSFIPNFHIENYYFSNKIYLFIISCILALIAQLSDL 185
Query: 335 TESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAY 373
S KR +KDSG +IPGHGG+LDR DS I T + +
Sbjct: 186 FISYFKRKFNIKDSGHIIPGHGGVLDRFDSIILTTLILF 224
>sp|Q9ZDA8|CDSA_RICPR Phosphatidate cytidylyltransferase OS=Rickettsia prowazekii (strain
Madrid E) GN=cdsA PE=3 SV=1
Length = 228
Score = 60.1 bits (144), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 47/97 (48%), Gaps = 12/97 (12%)
Query: 282 ISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFG---FLNFFGSVFG------ 332
ISPKKTW G I G +V++S I P Y F +L +
Sbjct: 125 ISPKKTWTGLITGTVSAGLVSVLVSLI---PNYHIEHYYFSNKIYLFIISCILALIAQSS 181
Query: 333 DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTG 369
DL S KR +KDSG +IPGHGG+LDR DS I T
Sbjct: 182 DLFISYFKRKFNIKDSGHIIPGHGGVLDRFDSIILTA 218
>sp|Q4ULR7|CDSA_RICFE Phosphatidate cytidylyltransferase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=cdsA PE=3 SV=1
Length = 227
Score = 58.9 bits (141), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 10/100 (10%)
Query: 282 ISPKKTWEGTIVGL--GGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG------D 333
ISPKKTW G + G+ G +A F Y S ++ F+ + D
Sbjct: 125 ISPKKTWSGLVTGVLSAGLVAVLASFIPNFHIENYYFSNKIYLFI--ISCILALIAQSSD 182
Query: 334 LTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAY 373
L S +KR +KDSG +IPGHGG+LDR DS I T + +
Sbjct: 183 LFISYLKRKFNIKDSGHIIPGHGGVLDRFDSIILTAPVLF 222
>sp|O04928|CDS1_ARATH Phosphatidate cytidylyltransferase OS=Arabidopsis thaliana GN=CDS1
PE=2 SV=1
Length = 421
Score = 58.5 bits (140), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 62/153 (40%), Gaps = 46/153 (30%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKI---FCW------------------- 311
FGRT L +SPKKTWEG I I + VL+ I F W
Sbjct: 230 FGRTPLIKLSPKKTWEGFIGASVTTIISAFVLANILGRFPWLTCPRQDLSTGWLQCDADP 289
Query: 312 -----PRYLPSAIVFGF----------------LNFFGSV---FGDLTESMIKRDAGVKD 347
P LP+ I F L F S+ FG S KR +KD
Sbjct: 290 LFKPEPFALPAWIPEWFPWKEMTILPVQWHALCLGLFASIIAPFGGFFASGFKRAFKIKD 349
Query: 348 SGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
G IPGHGGI DR+D + AY ++++F+
Sbjct: 350 FGDSIPGHGGITDRMDCQMVMAVFAYIYLQSFI 382
>sp|Q8YHH2|CDSA_BRUME Phosphatidate cytidylyltransferase OS=Brucella melitensis biotype 1
(strain 16M / ATCC 23456 / NCTC 10094) GN=cdsA PE=3 SV=2
Length = 270
Score = 55.8 bits (133), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 363
S GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 207 SQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|P0C102|CDSA_BRUAB Phosphatidate cytidylyltransferase OS=Brucella abortus biovar 1
(strain 9-941) GN=cdsA PE=3 SV=1
Length = 270
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 363
S GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 207 SQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|Q2YRP9|CDSA_BRUA2 Phosphatidate cytidylyltransferase OS=Brucella abortus (strain
2308) GN=cdsA PE=3 SV=1
Length = 270
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 363
S GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 207 SQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|Q8G0E0|CDSA_BRUSU Phosphatidate cytidylyltransferase OS=Brucella suis biovar 1
(strain 1330) GN=cdsA PE=3 SV=1
Length = 270
Score = 55.5 bits (132), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/35 (68%), Positives = 27/35 (77%)
Query: 329 SVFGDLTESMIKRDAGVKDSGSLIPGHGGILDRVD 363
S GDL ES +KR G KDSG L+PGHGG+LDRVD
Sbjct: 207 SQIGDLAESWVKRQFGAKDSGRLLPGHGGVLDRVD 241
>sp|P56079|CDSA_DROME Phosphatidate cytidylyltransferase, photoreceptor-specific
OS=Drosophila melanogaster GN=CdsA PE=1 SV=2
Length = 447
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 61/152 (40%), Gaps = 45/152 (29%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY------------------L 315
FGRT L +SPKKTWEG I G + ++ S + C +Y +
Sbjct: 260 FGRTPLIKLSPKKTWEGFIGGGFATVLFGILFSYVLCNYQYFICPIQYSEEQGRMTMSCV 319
Query: 316 PSAI---------VFGF---LNFFGSV---------------FGDLTESMIKRDAGVKDS 348
PS + +FG LN + + FG S KR +KD
Sbjct: 320 PSYLFTPQEYSLKLFGIGKTLNLYPFIWHSISLSLFSSIIGPFGGFFASGFKRAFKIKDF 379
Query: 349 GSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
G +IPGHGGI+DR D ++ +F+
Sbjct: 380 GDMIPGHGGIMDRFDCQFLMATFVNVYISSFI 411
>sp|P38221|CDS1_YEAST Phosphatidate cytidylyltransferase OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CDS1 PE=1 SV=1
Length = 457
Score = 54.3 bits (129), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 73/190 (38%), Gaps = 60/190 (31%)
Query: 240 FWVKLRCGLSAPALNTGIGVSWPILLGGLPHWTAFGRTQLTSISPKKTWEGTI-----VG 294
FW L CGL + + L G FG+T+L ISPKKT EG +
Sbjct: 216 FWFLLPCGLVI------VNDIFAYLCG-----ITFGKTKLIEISPKKTLEGFLGAWFFTA 264
Query: 295 LGGCIATTVV-----------------LSKIFCW--PRYLPSA----------------- 318
L I T ++ S + C P +LP
Sbjct: 265 LASIILTRILSPYTYLTCPVEDLHTNFFSNLTCELNPVFLPQVYRLPPIFFDKVQINSIT 324
Query: 319 ---IVFGFLNF--FGSVF---GDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGA 370
I F LN F S+F G S +KR VKD G IPGHGGI DRVD G+
Sbjct: 325 VKPIYFHALNLATFASLFAPFGGFFASGLKRTFKVKDFGHSIPGHGGITDRVDCQFIMGS 384
Query: 371 LAYSFVKTFL 380
A + +TF+
Sbjct: 385 FANLYYETFI 394
>sp|P75160|CDSA_MYCPN Putative phosphatidate cytidylyltransferase OS=Mycoplasma
pneumoniae (strain ATCC 29342 / M129) GN=cdsA PE=3 SV=1
Length = 395
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 53/135 (39%), Gaps = 45/135 (33%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY------------------- 314
FG+ L ISP KTWEG G+ G + T ++ ++ P Y
Sbjct: 225 FGKNPLIKISPSKTWEGAFFGVTGTVLTISIICVLYSIPNYVRQPSIKDASKTALQTPQN 284
Query: 315 ------LPSAIVFGFLN-----------------FFGSVF---GDLTESMIKRDAGVKDS 348
+ + + F++ F S+F GDL S IKR +KD
Sbjct: 285 YDVHNLITNVFLISFISGGSTFYIYWWVSTLALIFTASIFAIGGDLFFSYIKRLTKIKDF 344
Query: 349 GSLIPGHGGILDRVD 363
L+ HGGILDR D
Sbjct: 345 SKLLGKHGGILDRFD 359
>sp|P53439|CDSA_CAEEL Probable phosphatidate cytidylyltransferase OS=Caenorhabditis
elegans GN=C33H5.18 PE=2 SV=1
Length = 455
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 62/157 (39%), Gaps = 50/157 (31%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLS--------------------------- 306
+G+T L +SPKKTWEG I G + ++LS
Sbjct: 262 WGKTPLIKLSPKKTWEGFIGGAFSTVVFGILLSLALYNRPFFVCPVQHYQTDSSNCTIPL 321
Query: 307 --KIFCWPRYLPSAIVFGFL------------------NFFGSV---FGDLTESMIKRDA 343
++ +P P + V+ L + F S+ FG S KR
Sbjct: 322 AFQLQDYPVPRPFSFVYKILRKEPIIQLCPFVFHSIALSLFASILGPFGGFFASGFKRAF 381
Query: 344 GVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
+KD G +IPGHGG++DR D + G ++ +F+
Sbjct: 382 KIKDFGDVIPGHGGLMDRFDCQLLMGTFVMVYIHSFI 418
>sp|O67292|CDSA_AQUAE Phosphatidate cytidylyltransferase OS=Aquifex aeolicus (strain VF5)
GN=cdsA PE=3 SV=1
Length = 259
Score = 50.4 bits (119), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 52/101 (51%), Gaps = 6/101 (5%)
Query: 274 FGRTQLT-SISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRYLPSAIVFGFLNFFGSVFG 332
FG+T L ISPKKT EG LGG + ++ + P + ++ + G V G
Sbjct: 152 FGKTPLFPKISPKKTVEGF---LGGVLFGSLFFA--LTLPYGILNSFLLGTFVLTVGVAG 206
Query: 333 DLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYIFTGALAY 373
D +S IKR G+KD ++ HGG DR D+ +F+ + Y
Sbjct: 207 DYFKSFIKRQVGIKDFSNVFGEHGGFTDRFDALVFSAPVFY 247
>sp|O04940|CDS1_SOLTU Phosphatidate cytidylyltransferase OS=Solanum tuberosum GN=CDS1
PE=2 SV=1
Length = 424
Score = 50.1 bits (118), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 59/151 (39%), Gaps = 46/151 (30%)
Query: 276 RTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIF-------C--------W--------- 311
RT L +SPKKTWEG I I + +L+ +F C W
Sbjct: 232 RTPLIKLSPKKTWEGFIGASITTIISAFLLANMFGRFQWLTCPRKDLSTGWLDCDPGPLF 291
Query: 312 -------PRYLPS---------------AIVFGFLNFFGSVFGDLTESMIKRDAGVKDSG 349
P + P+ A++ G + FG S KR +KD G
Sbjct: 292 KPEYFTLPEWFPAWFLSREIAVLPVQWHALLLGLFASIIAPFGGFFASGFKRAFKIKDFG 351
Query: 350 SLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
IPGHGG+ DR+D + AY + ++F+
Sbjct: 352 DSIPGHGGMTDRMDCQMVMAVFAYIYHQSFI 382
>sp|A0JNC1|CDS2_BOVIN Phosphatidate cytidylyltransferase 2 OS=Bos taurus GN=CDS2 PE=1
SV=1
Length = 445
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 57/156 (36%), Gaps = 49/156 (31%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIF----------------------CW 311
FGRT L +SPKKTWEG I G + ++LS + C
Sbjct: 246 FGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVDCE 305
Query: 312 P------------------------RYLPSAIVFGFLNFFGSV---FGDLTESMIKRDAG 344
P R P I L+ F S+ FG S KR
Sbjct: 306 PSGLFRLQEYNIPGVIQSIIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRAFK 365
Query: 345 VKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
+KD + IPGHGGI+DR D ++ +F+
Sbjct: 366 IKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI 401
>sp|O95674|CDS2_HUMAN Phosphatidate cytidylyltransferase 2 OS=Homo sapiens GN=CDS2 PE=1
SV=1
Length = 445
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 57/156 (36%), Gaps = 49/156 (31%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIF----------------------CW 311
FGRT L +SPKKTWEG I G + ++LS + C
Sbjct: 246 FGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVDCE 305
Query: 312 P------------------------RYLPSAIVFGFLNFFGSV---FGDLTESMIKRDAG 344
P R P I L+ F S+ FG S KR
Sbjct: 306 PSDLFRLQEYNIPGVIQSVIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRAFK 365
Query: 345 VKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
+KD + IPGHGGI+DR D ++ +F+
Sbjct: 366 IKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI 401
>sp|Q92903|CDS1_HUMAN Phosphatidate cytidylyltransferase 1 OS=Homo sapiens GN=CDS1 PE=2
SV=2
Length = 461
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 64/159 (40%), Gaps = 55/159 (34%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTV-------VLSKI------------------ 308
FGRT L +SPKKTWEG I GG +T V VLSK
Sbjct: 263 FGRTPLIKLSPKKTWEGFI---GGFFSTVVFGFIAAYVLSKYQYFVCPVEYRSDVNSFVT 319
Query: 309 ------------FCWPRYLPSAI------VFGF------LNFFGSV---FGDLTESMIKR 341
+ P +L + + ++ F L+ F S+ FG S KR
Sbjct: 320 ECEPSELFQLQTYSLPPFLKAVLRQERVSLYPFQIHSIALSTFASLIGPFGGFFASGFKR 379
Query: 342 DAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
+KD + IPGHGGI+DR D + ++ +F+
Sbjct: 380 AFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYITSFI 418
>sp|Q99L43|CDS2_MOUSE Phosphatidate cytidylyltransferase 2 OS=Mus musculus GN=Cds2 PE=1
SV=1
Length = 444
Score = 49.7 bits (117), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 57/156 (36%), Gaps = 49/156 (31%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIF----------------------CW 311
FGRT L +SPKKTWEG I G + ++LS + C
Sbjct: 245 FGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVDCE 304
Query: 312 P------------------------RYLPSAIVFGFLNFFGSV---FGDLTESMIKRDAG 344
P R P I L+ F S+ FG S KR
Sbjct: 305 PSDLFRLQEYNIPGVIQSAIGWKTVRMYPFQIHSIALSTFASLIGPFGGFFASGFKRAFK 364
Query: 345 VKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
+KD + IPGHGGI+DR D ++ +F+
Sbjct: 365 IKDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI 400
>sp|Q91XU8|CDS2_RAT Phosphatidate cytidylyltransferase 2 OS=Rattus norvegicus GN=Cds2
PE=2 SV=1
Length = 443
Score = 48.9 bits (115), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 58/155 (37%), Gaps = 48/155 (30%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIF----------------------CW 311
FGRT L +SPKKTWEG I G + ++LS + C
Sbjct: 245 FGRTPLIKLSPKKTWEGFIGGFFATVVFGLLLSYVMSGYRCFVCPVEYNNDTNSFTVDCE 304
Query: 312 PRYL--------PSAI---------------VFGFLNFFGSV---FGDLTESMIKRDAGV 345
P L P I + L+ F S+ FG S KR +
Sbjct: 305 PSDLFRLQEYNIPGVIQSLVGWKTMRMYPFQIHSALSTFASLIGPFGGFFASGFKRAFKI 364
Query: 346 KDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
KD + IPGHGGI+DR D ++ +F+
Sbjct: 365 KDFANTIPGHGGIMDRFDCQYLMATFVNVYIASFI 399
>sp|P98191|CDS1_MOUSE Phosphatidate cytidylyltransferase 1 OS=Mus musculus GN=Cds1 PE=2
SV=2
Length = 461
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 55/159 (34%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTV-------VLSKI------------------ 308
FGRT L +SPKKTWEG I GG +T + VLSK
Sbjct: 263 FGRTPLIKLSPKKTWEGFI---GGFFSTVIFGFIAAYVLSKYQYFVCPVEYRSDVNSFVT 319
Query: 309 ------------FCWPRYLPSAI------VFGF------LNFFGSV---FGDLTESMIKR 341
+ P +L + + ++ F L+ F S+ FG S KR
Sbjct: 320 ECEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQIHSIALSTFASLIGPFGGFFASGFKR 379
Query: 342 DAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
+KD + IPGHGGI+DR D + ++ +F+
Sbjct: 380 AFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYITSFI 418
>sp|O35052|CDS1_RAT Phosphatidate cytidylyltransferase 1 OS=Rattus norvegicus GN=Cds1
PE=1 SV=2
Length = 461
Score = 48.9 bits (115), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 64/159 (40%), Gaps = 55/159 (34%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTV-------VLSKI------------------ 308
FGRT L +SPKKTWEG I GG +T + VLSK
Sbjct: 263 FGRTPLIKLSPKKTWEGFI---GGFFSTVIFGFIAAYVLSKYQYFVCPVEYRSDVNSFVT 319
Query: 309 ------------FCWPRYLPSAI------VFGF------LNFFGSV---FGDLTESMIKR 341
+ P +L + + ++ F L+ F S+ FG S KR
Sbjct: 320 ECEPSELFQLQNYSLPPFLQAVLSRETVSLYPFQIHSIALSTFASLIGPFGGFFASGFKR 379
Query: 342 DAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
+KD + IPGHGGI+DR D + ++ +F+
Sbjct: 380 AFKIKDFANTIPGHGGIMDRFDCQYLMATFVHVYITSFI 418
>sp|Q55D90|CDSA_DICDI Probable phosphatidate cytidylyltransferase OS=Dictyostelium
discoideum GN=cdsA PE=3 SV=1
Length = 479
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 87/374 (23%), Positives = 129/374 (34%), Gaps = 92/374 (24%)
Query: 87 LKEGIDNGHKLVVSEKSVSDSGSQQKASQLRKRIGFGLGIGIFVGGVVLAGGWVFTVCFA 146
+ ++N L K+ ++ K +R +G IG F +VL+ T F
Sbjct: 76 IDSSVNNADNL----KATDPPSAKYKKLAIRSVMG-AFMIGFFT--IVLS-----TDHFI 123
Query: 147 AAVFVGARE---YFELVRSRGIAAGMTPPPR----------------YVSRVCSVICAFM 187
A+FV A + + E++ R I A P Y + + +
Sbjct: 124 VALFVIALQLLVFKEMIALRYIEAKEKKIPHFRTLNWFFLFTSFFFFYAKPILITLANYY 183
Query: 188 PILTLYFGQIDVSVTFAAFVVAMALL---LQRGNPR--FAQLSSTIFGLFYCGYLPCFWV 242
P + +F + + +F+ + + L L++G R F+QL+ T+ L F +
Sbjct: 184 PDIFQHFVRYHLWHSFSLYCIGFVLFILTLRKGVYRYQFSQLTWTLMILMMVVVQSNFLI 243
Query: 243 -KLRCGLSAPALNTGIGVSWPIL--LGGLPHWTAFGRTQLTSISPKKTWEGTIVGLG--- 296
+ GL L I V I G F L ISP KTWEG I G
Sbjct: 244 SNIYQGLIWFILPVSIIVCNDIFAYFNGFFLGKKFINRPLMKISPNKTWEGFIGATGWTL 303
Query: 297 -----------------------------GCIATTVVLSKIFCWP--------------- 312
C V L K F +P
Sbjct: 304 LFAYYFCGFLLKYDWIVCPKGNTGFMESLHCTRDPVFLEKEFIFPPEITTIAFKYLGITL 363
Query: 313 ---RYLPSAIVFGFLNFFGSV---FGDLTESMIKRDAGVKDSGSLIPGHGGILDRVDSYI 366
Y+P L FGS+ FG S IKR VKD ++ PGHGG+ DR D
Sbjct: 364 LPFTYIPIQFHALVLALFGSLIAPFGGFFASGIKRAYKVKDFDTIFPGHGGVTDRTDCQF 423
Query: 367 FTGALAYSFVKTFL 380
G + + TF+
Sbjct: 424 IMGLFIHVYYNTFI 437
>sp|Q9P381|CDSH_SCHPO Putative phosphatidate cytidylyltransferase OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=SPBC13A2.03 PE=1 SV=1
Length = 439
Score = 47.4 bits (111), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 60/160 (37%), Gaps = 56/160 (35%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVV-------------------------LSKI 308
FG+ L +SPKKT EG LGG I T V+ S +
Sbjct: 229 FGKHPLIQVSPKKTVEGF---LGGWICTVVIGSLISYVLMHFKYFICPTRDLSTSAFSGL 285
Query: 309 FCWPR------------------YLPSAIVFGFLNF-------FGSV---FGDLTESMIK 340
C P LP I + F F S+ FG S +K
Sbjct: 286 NCTPNSVFLPHTYTIPAVFVDTFRLPETITLAPIYFHLAIFATFSSLIAPFGGFFASGLK 345
Query: 341 RDAGVKDSGSLIPGHGGILDRVDSYIFTGALAYSFVKTFL 380
R +KD G+ IPGHGG+ DR+D G Y + ++F+
Sbjct: 346 RAFKIKDFGASIPGHGGLTDRMDCQFLNGVFVYMYFQSFI 385
>sp|Q49433|CDSA_MYCGE Putative phosphatidate cytidylyltransferase OS=Mycoplasma
genitalium (strain ATCC 33530 / G-37 / NCTC 10195)
GN=cdsA PE=3 SV=1
Length = 305
Score = 44.3 bits (103), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 51/133 (38%), Gaps = 45/133 (33%)
Query: 274 FGRTQLTSISPKKTWEGTIVGLGGCIATTVVLSKIFCWPRY------------------- 314
FG+ L ISP KTWEG G+ I +L ++ P +
Sbjct: 131 FGKNPLIKISPSKTWEGAFFGIISTIVVVALLCVLYSIPFFVAKPTFNQTNGIALNTPQN 190
Query: 315 ------LPSAIVFGFLN-----------------FFGSVF---GDLTESMIKRDAGVKDS 348
+ + + F++ F GSVF GDL S IKR +KD
Sbjct: 191 YDSHNLITNIFLIAFISGGSSFYIYWWVSTLALIFTGSVFAIGGDLFFSYIKRLISIKDF 250
Query: 349 GSLIPGHGGILDR 361
++ HGG+LDR
Sbjct: 251 SKVLGKHGGVLDR 263
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.142 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 140,084,112
Number of Sequences: 539616
Number of extensions: 5879576
Number of successful extensions: 16793
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 35
Number of HSP's that attempted gapping in prelim test: 16686
Number of HSP's gapped (non-prelim): 110
length of query: 385
length of database: 191,569,459
effective HSP length: 119
effective length of query: 266
effective length of database: 127,355,155
effective search space: 33876471230
effective search space used: 33876471230
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 62 (28.5 bits)