Query 016647
Match_columns 385
No_of_seqs 349 out of 3407
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 17:06:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016647.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/016647hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3qo6_A Protease DO-like 1, chl 100.0 3E-48 1E-52 380.5 27.1 275 109-383 10-335 (348)
2 3stj_A Protease DEGQ; serine p 100.0 5E-47 1.7E-51 371.0 28.5 263 117-383 14-336 (345)
3 4a8c_A Periplasmic PH-dependen 100.0 1.7E-44 5.8E-49 363.7 33.1 263 116-382 13-335 (436)
4 1te0_A Protease DEGS; two doma 100.0 1.7E-43 5.8E-48 342.6 29.8 263 114-383 7-317 (318)
5 4fln_A Protease DO-like 2, chl 100.0 2E-43 6.9E-48 360.7 30.2 253 124-383 45-359 (539)
6 3pv2_A DEGQ; trypsin fold, PDZ 100.0 5.6E-44 1.9E-48 361.0 25.4 261 116-381 19-353 (451)
7 1y8t_A Hypothetical protein RV 100.0 1.5E-42 5E-47 336.9 30.3 256 116-383 6-316 (324)
8 1ky9_A Protease DO, DEGP, HTRA 100.0 1.3E-42 4.5E-47 350.7 22.4 261 117-381 14-357 (448)
9 3num_A Serine protease HTRA1; 100.0 1.6E-42 5.6E-47 337.7 18.9 257 114-383 12-324 (332)
10 1lcy_A HTRA2 serine protease; 100.0 8.7E-42 3E-46 331.6 23.3 252 116-380 15-323 (325)
11 3sti_A Protease DEGQ; serine p 100.0 1.2E-34 4.2E-39 270.2 17.5 195 117-315 14-223 (245)
12 1l1j_A Heat shock protease HTR 100.0 1.6E-33 5.5E-38 261.9 18.7 198 117-315 5-218 (239)
13 3lgi_A Protease DEGS; stress-s 100.0 1.2E-32 4.1E-37 255.7 21.6 194 115-315 19-215 (237)
14 3tjo_A Serine protease HTRA1; 100.0 1.9E-32 6.6E-37 253.4 16.2 191 115-315 30-220 (231)
15 3k6y_A Serine protease, possib 100.0 5.5E-29 1.9E-33 230.9 23.3 183 116-315 31-216 (237)
16 2w5e_A Putative serine proteas 99.9 2.1E-23 7.3E-28 182.3 19.4 138 150-313 19-156 (163)
17 2as9_A Serine protease; trypsi 99.9 2E-21 6.9E-26 176.6 15.5 168 127-315 3-193 (210)
18 1agj_A Epidermolytic toxin A; 99.8 8.7E-21 3E-25 175.9 14.8 152 151-314 54-230 (242)
19 2h5c_A Alpha-lytic protease; s 99.8 5.5E-19 1.9E-23 159.2 15.7 153 153-315 17-186 (198)
20 2w7s_A Serine protease SPLA; h 99.8 1.3E-19 4.3E-24 163.1 10.3 133 152-299 22-174 (200)
21 1qtf_A Exfoliative toxin B; se 99.8 1.4E-19 4.7E-24 168.5 10.4 142 151-315 47-214 (246)
22 2o8l_A V8 protease, taphylococ 99.8 3.9E-18 1.3E-22 161.3 19.3 135 152-299 34-189 (274)
23 1wcz_A Glutamyl endopeptidase; 99.8 6.1E-18 2.1E-22 159.4 17.0 136 151-299 33-189 (268)
24 2vid_A Serine protease SPLB; h 99.8 5.1E-18 1.8E-22 152.6 13.8 132 152-298 22-176 (204)
25 1hpg_A Glutamic acid specific 99.7 2.8E-17 9.6E-22 146.7 16.4 153 153-315 13-177 (187)
26 2qa9_E Streptogrisin-B; chymot 99.7 2.2E-17 7.5E-22 146.9 13.2 155 152-314 12-174 (185)
27 2oua_A Serine protease, protei 99.7 4.2E-17 1.4E-21 145.7 14.3 151 152-315 14-177 (188)
28 1mbm_A NSP4 proteinase, chymot 99.7 1.1E-16 3.7E-21 139.2 10.6 115 150-296 13-130 (198)
29 2ea3_A Chymotrypsin; celloulom 99.7 4E-16 1.4E-20 139.4 13.3 146 153-315 17-171 (189)
30 2pfe_A Protease A, alkaline se 99.7 3E-16 1E-20 139.9 10.3 146 155-315 18-174 (186)
31 2sga_A Proteinase A; hydrolase 99.6 6E-16 2E-20 137.1 9.6 150 151-315 11-171 (181)
32 3fan_A Non-structural protein; 99.5 8.6E-15 2.9E-19 129.3 7.7 117 151-297 29-145 (213)
33 1pq7_A Trypsin; ultra-high res 99.5 4.5E-13 1.6E-17 122.2 16.2 146 152-298 24-199 (224)
34 1gvz_A Kallikrein-1E2; antigen 99.4 2E-12 7E-17 118.7 16.1 142 152-298 24-207 (237)
35 1eq9_A Chymotrypsin; FIRE ANT, 99.4 9.5E-13 3.3E-17 119.9 13.7 144 152-298 24-196 (222)
36 1azz_A Collagenase; complex (s 99.4 1.3E-12 4.4E-17 119.5 14.2 145 151-298 23-196 (226)
37 1mza_A Pro-granzyme K; apoptos 99.4 6.4E-12 2.2E-16 115.6 18.9 145 152-298 26-208 (240)
38 1cgh_A Cathepsin G; inflammati 99.4 7.1E-12 2.4E-16 114.2 18.8 143 152-298 27-199 (224)
39 1fxy_A Coagulation factor XA-t 99.4 2.4E-12 8.3E-17 117.7 15.4 145 151-298 24-199 (228)
40 1npm_A Neuropsin; serine prote 99.4 3.8E-12 1.3E-16 116.2 16.5 141 152-297 24-197 (225)
41 1a7s_A Heparin binding protein 99.4 3.5E-12 1.2E-16 116.2 16.2 138 152-298 24-193 (225)
42 2zch_P Prostate-specific antig 99.4 4.2E-12 1.4E-16 116.7 16.7 143 151-298 23-207 (237)
43 1fuj_A PR3, myeloblastin; hydr 99.4 1E-11 3.5E-16 112.7 18.9 136 152-297 27-193 (221)
44 2z7f_E Leukocyte elastase; ser 99.4 3.6E-12 1.2E-16 115.7 15.5 136 152-297 24-190 (218)
45 2l97_A HTRA, putative serine p 99.4 8E-13 2.7E-17 111.4 10.0 67 316-383 63-129 (134)
46 2xw9_A Complement factor D; im 99.4 8E-12 2.7E-16 114.0 17.4 145 152-298 24-201 (228)
47 4ag1_A Chymase; hydrolase-de n 99.4 3.1E-11 1.1E-15 109.8 20.9 160 126-299 12-201 (226)
48 3mfj_A Cationic trypsin; serin 99.4 7.4E-12 2.5E-16 114.1 16.4 142 152-298 23-195 (223)
49 1ao5_A Glandular kallikrein-13 99.4 4.6E-12 1.6E-16 116.4 15.2 141 152-297 24-206 (237)
50 1lo6_A Kallikrein 6, HK6; seri 99.4 6.6E-12 2.3E-16 114.5 16.0 141 152-297 24-193 (223)
51 1hj8_A Trypsin I; hydrolase, r 99.4 1.1E-11 3.9E-16 112.8 17.4 142 152-298 23-194 (222)
52 3h7t_A Group 3 allergen smipp- 99.4 3.9E-12 1.3E-16 116.2 14.3 146 151-298 23-204 (235)
53 1iau_A Granzyme B; hydrolase-h 99.4 7.6E-12 2.6E-16 114.2 15.9 142 152-297 27-200 (227)
54 1bru_P Elastase, PPE; serine p 99.4 2.6E-11 8.8E-16 111.8 19.6 146 152-298 28-211 (241)
55 1elt_A Elastase; serine protei 99.4 1.2E-11 4.1E-16 113.5 17.2 146 152-298 28-209 (236)
56 2aiq_A Protein C activator; sn 99.4 8.8E-12 3E-16 114.2 16.1 141 152-297 23-194 (231)
57 1p3c_A Glutamyl-endopeptidase; 99.4 2E-12 7E-17 117.0 11.5 137 151-298 29-190 (215)
58 1orf_A Granzyme A; hydrolase-h 99.4 1.9E-11 6.6E-16 112.0 18.2 145 151-298 23-202 (234)
59 1si5_H Scatter factor, hepatoc 99.4 2.9E-11 9.8E-16 111.3 19.3 147 151-298 22-201 (240)
60 1m9u_A Earthworm fibrinolytic 99.4 9.3E-12 3.2E-16 114.5 15.8 144 152-296 27-210 (241)
61 1gvk_B Elastase 1, peptide inh 99.4 1.6E-11 5.4E-16 113.1 16.8 146 152-298 28-210 (240)
62 3rp2_A RAT MAST cell protease 99.4 3.8E-11 1.3E-15 109.0 19.1 160 126-299 12-201 (224)
63 2bdg_A Kallikrein-4; serine pr 99.4 1.2E-11 4.2E-16 112.7 15.7 143 151-298 23-195 (223)
64 1ton_A Tonin; hydrolase(serine 99.4 2E-11 7E-16 111.9 17.2 141 152-297 22-204 (235)
65 2asu_B Hepatocyte growth facto 99.4 1.9E-11 6.7E-16 112.1 16.7 147 151-298 21-200 (234)
66 2zgc_A Granzyme M; serine prot 99.3 2.6E-11 9E-16 111.8 17.3 145 152-297 24-201 (240)
67 2oq5_A Transmembrane protease, 99.3 4.5E-11 1.5E-15 109.3 18.6 146 152-298 24-205 (232)
68 2qxi_A Kallikrein-7; S1 pocket 99.3 1.1E-11 3.9E-16 113.0 14.2 140 153-297 25-193 (224)
69 3s69_A Thrombin-like enzyme de 99.3 2.6E-11 8.7E-16 110.8 16.6 144 151-299 23-199 (234)
70 1euf_A Duodenase; serine prote 99.3 4.9E-11 1.7E-15 108.9 18.3 142 152-297 27-199 (227)
71 2psx_A Kallikrein-5; zinc inhi 99.3 3.4E-11 1.2E-15 109.9 17.3 141 152-297 25-196 (227)
72 4e7n_A Snake-venom thrombin-li 99.3 3.6E-11 1.2E-15 110.1 17.5 144 151-299 25-203 (238)
73 3ncl_A Suppressor of tumorigen 99.3 4.4E-11 1.5E-15 109.7 17.9 146 152-298 25-214 (241)
74 1aut_C Activated protein C; se 99.3 2.4E-11 8.1E-16 112.7 16.1 147 151-298 24-213 (250)
75 3gov_B MAsp-1; complement, ser 99.3 6.4E-11 2.2E-15 109.1 18.9 146 151-298 24-222 (251)
76 4i8h_A Cationic trypsin, beta- 99.3 3.3E-11 1.1E-15 109.4 16.6 142 152-298 23-195 (223)
77 2any_A Kininogenin, plasma kal 99.3 5.7E-11 2E-15 109.3 18.4 146 152-298 27-210 (241)
78 1ym0_A Fibrinotic enzyme compo 99.3 2.7E-11 9.1E-16 111.1 16.0 146 152-298 26-211 (238)
79 1spj_A Kallikrein 1; serine pr 99.3 1.9E-11 6.4E-16 112.3 15.0 142 152-298 24-208 (238)
80 2hlc_A Collagenase; serine pro 99.3 3.9E-11 1.3E-15 109.6 16.9 146 151-298 27-200 (230)
81 3fzz_A Granzyme C; hydrolase, 99.3 3.1E-11 1.1E-15 109.8 16.0 159 126-298 12-202 (227)
82 2r0l_A Hepatocyte growth facto 99.3 7.8E-11 2.7E-15 108.8 18.8 146 152-298 23-213 (248)
83 1sgf_A 7S NGF, nerve growth fa 99.3 1.5E-11 5.1E-16 113.2 13.8 141 152-297 27-209 (240)
84 3s9c_A Vipera russelli protein 99.3 5.3E-11 1.8E-15 108.7 16.7 143 152-299 26-199 (234)
85 1pyt_D TC, PCPA-TC, chymotryps 99.3 1E-10 3.5E-15 108.4 18.8 146 152-298 41-222 (251)
86 3beu_A Trypsin, SGT; beta shee 99.3 6.2E-11 2.1E-15 107.6 16.8 143 153-298 21-196 (224)
87 2olg_A Pro-phenoloxidase activ 99.3 1.3E-10 4.3E-15 109.3 19.3 145 152-297 51-250 (278)
88 3h7o_A Group 3 allergen smipp- 99.3 2.7E-11 9.3E-16 110.2 13.9 144 153-298 27-201 (228)
89 3bg8_A Coagulation factor XIA 99.3 5.4E-11 1.8E-15 109.3 15.7 146 152-298 27-210 (238)
90 2f91_A Hepatopancreas trypsin; 99.3 8.2E-11 2.8E-15 108.0 16.9 144 153-298 29-211 (237)
91 3mhw_U Urokinase-type plasmino 99.3 1.5E-10 5.1E-15 106.5 18.7 146 152-298 29-220 (247)
92 3gyl_B Prostasin; ENAC, zymoge 99.3 4.8E-11 1.6E-15 110.8 15.0 147 151-298 23-216 (261)
93 1yc0_A Hepatocyte growth facto 99.3 1.4E-10 4.9E-15 109.4 18.4 147 151-298 57-248 (283)
94 1ddj_A Plasminogen; catalytic 99.3 2.9E-10 9.8E-15 105.1 20.0 147 151-298 41-219 (247)
95 1rtf_B (TC)-T-PA, two chain ti 99.3 2.6E-10 8.7E-15 105.5 19.5 146 152-298 30-225 (252)
96 2jkh_A Activated factor XA hea 99.3 3.2E-11 1.1E-15 111.0 13.2 147 151-298 24-207 (241)
97 3tvj_B Mannan-binding lectin s 99.3 8.5E-11 2.9E-15 107.7 15.4 145 152-297 22-212 (242)
98 2jde_A Urokinase-type plasmino 99.3 2.3E-10 7.7E-15 107.4 18.4 146 152-298 52-243 (276)
99 1t8o_A Chymotrypsin A; chymotr 99.3 8.3E-11 2.8E-15 108.7 15.0 146 151-298 39-217 (245)
100 1fon_A Procarboxypeptidase A-S 99.3 1.4E-11 4.9E-16 113.3 9.5 146 152-298 26-210 (240)
101 2qy0_B Complement C1R subcompo 99.2 6.6E-11 2.3E-15 108.8 13.9 146 152-298 22-215 (242)
102 1fiw_A Beta-acrosin heavy chai 99.2 5.3E-10 1.8E-14 106.0 20.3 146 152-298 30-223 (290)
103 2wph_S Coagulation factor IXA 99.2 5.1E-11 1.7E-15 109.1 12.7 146 152-298 24-207 (235)
104 4dgj_A Enteropeptidase catalyt 99.2 1.6E-10 5.5E-15 105.6 15.6 147 151-298 23-209 (235)
105 4f4o_C Haptoglobin; globin fol 99.2 8.2E-11 2.8E-15 114.6 14.3 148 150-298 124-320 (347)
106 2f9n_A Alpha I tryptase; serin 99.2 1.6E-10 5.4E-15 106.6 15.6 146 152-298 27-216 (245)
107 2bz6_H Blood coagulation facto 99.2 3.8E-11 1.3E-15 111.3 11.4 146 152-298 24-214 (254)
108 1z8g_A Serine protease hepsin; 99.2 2E-10 6.9E-15 112.8 16.2 147 151-298 140-334 (372)
109 3cp7_A Alkaline serine proteas 99.2 1.1E-10 3.7E-15 106.3 13.3 139 152-298 21-191 (218)
110 2kjp_A Uncharacterized protein 99.2 1.6E-11 5.5E-16 96.4 6.1 67 316-383 7-73 (91)
111 1arb_A Achromobacter protease 99.2 1.1E-10 3.7E-15 109.6 12.1 146 124-298 20-213 (268)
112 3f1s_B Vitamin K-dependent pro 99.2 3E-11 1E-15 114.2 8.3 146 151-297 76-250 (283)
113 3i18_A LMO2051 protein; alpha- 99.2 1.2E-10 4E-15 92.9 9.5 67 316-383 13-79 (100)
114 3rm2_H Thrombin heavy chain; s 99.2 3E-10 1E-14 105.1 13.7 146 152-298 26-229 (259)
115 2kl1_A YLBL protein; structure 99.2 9E-11 3.1E-15 92.6 8.2 67 316-383 11-77 (94)
116 2bdy_A Thrombin; thrombin, com 99.1 4.6E-10 1.6E-14 106.3 14.4 146 152-298 56-259 (289)
117 1zyo_A Serine protease; beta-b 99.1 2.8E-10 9.5E-15 101.2 11.9 142 127-297 16-167 (191)
118 2i6v_A General secretion pathw 99.1 1E-10 3.5E-15 90.8 7.6 60 319-378 28-87 (87)
119 2b9l_A Prophenoloxidase activa 99.1 4.6E-10 1.6E-14 111.1 14.1 147 151-298 161-357 (394)
120 3h5c_B Vitamin K-dependent pro 99.1 4.1E-10 1.4E-14 107.9 13.3 146 151-297 117-291 (317)
121 1zjk_A Mannan-binding lectin s 99.1 1.2E-09 4E-14 108.3 16.1 144 153-297 184-373 (403)
122 1md8_A C1R complement serine p 99.1 8.8E-10 3E-14 106.5 14.7 146 152-298 111-304 (329)
123 1elv_A Complement C1S componen 99.1 1.5E-09 5.2E-14 104.8 15.7 145 153-298 104-302 (333)
124 2vnt_A Urokinase-type plasmino 99.1 5.7E-09 1.9E-13 97.6 18.8 163 126-298 35-243 (276)
125 1gpz_A Complement C1R componen 99.1 2.2E-09 7.6E-14 106.1 16.0 146 152-298 179-372 (399)
126 3id1_A Regulator of sigma E pr 99.0 6.1E-10 2.1E-14 87.9 7.7 67 316-382 8-76 (95)
127 2i4s_A General secretion pathw 99.0 4.1E-10 1.4E-14 90.6 6.6 60 319-378 46-105 (105)
128 2xxl_A GRAM-positive specific 99.0 5.2E-09 1.8E-13 104.0 16.0 145 152-297 146-345 (408)
129 2zpm_A Regulator of sigma E pr 99.0 7E-10 2.4E-14 86.5 7.5 64 316-380 10-73 (91)
130 3nxp_A Prethrombin-1; alloster 99.0 1.5E-09 5E-14 108.5 10.9 146 152-298 191-394 (424)
131 4dur_A Plasminogen, serine pro 99.0 1.6E-08 5.6E-13 108.0 19.4 147 151-298 585-763 (791)
132 2f83_A Coagulation factor XI; 98.9 7.5E-09 2.6E-13 108.3 13.8 147 151-298 413-597 (625)
133 2xrc_A Human complement factor 98.9 7.9E-09 2.7E-13 106.9 13.5 147 151-298 344-530 (565)
134 1rrk_A Complement factor B; BB 98.9 3.5E-09 1.2E-13 107.4 9.3 147 151-298 241-454 (497)
135 2pzd_A Serine protease HTRA2; 98.9 3.2E-09 1.1E-13 86.2 6.8 65 316-383 41-105 (113)
136 2vz5_A TAX1-binding protein 3; 98.9 2.8E-09 9.7E-14 90.1 6.4 66 316-382 70-137 (139)
137 2p3w_A Probable serine proteas 98.8 2.7E-09 9.2E-14 86.6 5.6 65 316-383 41-105 (112)
138 1ihj_A INAD; intermolecular di 98.8 9.2E-09 3.1E-13 81.2 7.9 53 316-370 43-98 (98)
139 2odp_A Complement C2; C3/C5 co 98.8 1.9E-09 6.5E-14 109.8 4.2 148 150-298 245-458 (509)
140 2eaq_A LIM domain only protein 98.8 3.4E-09 1.2E-13 82.3 4.6 55 316-370 34-90 (90)
141 2vsp_A PDZ domain-containing p 98.8 8.7E-09 3E-13 80.3 6.6 55 316-372 33-89 (91)
142 3hrz_D Complement factor B; se 98.8 8.8E-09 3E-13 109.5 8.7 85 151-236 483-596 (741)
143 2pkt_A PDZ and LIM domain prot 98.8 4E-09 1.4E-13 82.2 4.4 55 316-372 33-89 (91)
144 1yph_C Chymotrypsin A, chain B 98.8 8.9E-08 3.1E-12 79.6 12.5 85 151-237 24-128 (131)
145 1qau_A Neuronal nitric oxide s 98.7 1.3E-08 4.6E-13 82.3 6.3 66 316-382 32-100 (112)
146 2hga_A Conserved protein MTH13 98.7 2.7E-08 9.4E-13 82.5 8.0 61 316-381 31-91 (125)
147 3bpu_A Membrane-associated gua 98.7 3E-08 1E-12 76.6 6.7 51 319-370 35-87 (88)
148 2pa1_A PDZ and LIM domain prot 98.7 3.1E-08 1.1E-12 76.4 6.5 53 316-370 32-86 (87)
149 2dls_A PDZ-rhogef, RHO guanine 98.7 2.2E-08 7.6E-13 78.3 5.7 54 316-370 35-88 (93)
150 1wif_A RSGI RUH-020, riken cDN 98.7 2.9E-08 1E-12 82.4 6.6 53 316-368 55-110 (126)
151 3cyy_A Tight junction protein 98.6 4.2E-08 1.4E-12 76.3 5.8 59 316-376 29-90 (92)
152 3mmg_A Nuclear inclusion prote 98.6 2E-06 6.9E-11 78.0 17.4 164 125-316 14-185 (241)
153 2v90_A PDZ domain-containing p 98.6 1.3E-08 4.5E-13 80.0 2.7 56 316-373 36-93 (96)
154 1b8q_A Protein (neuronal nitri 98.6 4.1E-08 1.4E-12 81.3 5.8 65 316-381 39-106 (127)
155 2uzc_A Human pdlim5, PDZ and L 98.6 6.2E-08 2.1E-12 74.7 6.5 53 316-370 33-87 (88)
156 1wh1_A KIAA1095 protein; PDZ d 98.6 9.6E-09 3.3E-13 84.9 1.9 62 316-378 54-116 (124)
157 2jxo_A Ezrin-radixin-moesin-bi 98.6 1.5E-08 5.3E-13 79.9 2.9 55 316-371 39-95 (98)
158 1v5q_A GRIP1 homolog, glutamat 98.6 4.9E-08 1.7E-12 80.4 5.7 56 316-371 51-109 (122)
159 2he4_A Na(+)/H(+) exchange reg 98.6 4.6E-08 1.6E-12 75.9 5.1 53 316-370 34-88 (90)
160 2i04_A Membrane-associated gua 98.6 8.2E-08 2.8E-12 73.5 6.4 52 316-367 31-85 (85)
161 2w4f_A Protein LAP4; structura 98.6 2.7E-08 9.3E-13 78.2 3.6 56 316-371 40-95 (97)
162 1v5l_A PDZ and LIM domain 3; a 98.6 4.6E-08 1.6E-12 78.0 5.0 58 316-375 35-94 (103)
163 4fgm_A Aminopeptidase N family 98.6 7.8E-08 2.7E-12 99.8 7.7 67 316-383 502-568 (597)
164 2jil_A GRIP1 protein, glutamat 98.6 3.6E-08 1.2E-12 77.5 3.9 55 316-372 38-95 (97)
165 1ueq_A Membrane associated gua 98.5 3E-07 1E-11 75.7 9.4 55 316-370 50-107 (123)
166 1uit_A Human discs large 5 pro 98.5 3.9E-08 1.3E-12 80.3 3.9 59 316-374 48-106 (117)
167 2f5y_A Regulator of G-protein 98.5 1.3E-07 4.6E-12 73.5 6.9 55 316-372 30-86 (91)
168 1x5q_A LAP4 protein; PDZ domai 98.5 3E-08 1E-12 80.0 3.1 57 316-372 52-108 (110)
169 1ujv_A Membrane associated gua 98.5 1.6E-07 5.6E-12 73.9 7.2 49 323-371 43-93 (96)
170 1uf1_A KIAA1526 protein; PDZ d 98.5 1.3E-08 4.5E-13 84.5 0.8 65 316-381 52-116 (128)
171 3khf_A Microtubule-associated 98.5 8.5E-08 2.9E-12 75.7 5.5 54 316-371 40-95 (99)
172 1vb7_A PDZ and LIM domain 2; P 98.5 6.2E-08 2.1E-12 75.9 4.6 54 316-371 36-91 (94)
173 1wf7_A Enigma homologue protei 98.5 2.9E-08 9.9E-13 79.2 2.6 62 316-379 35-98 (103)
174 2q3g_A PDZ and LIM domain prot 98.5 1.5E-07 5.3E-12 72.7 6.7 54 316-371 33-88 (89)
175 3tsv_A Tight junction protein 98.5 6.4E-08 2.2E-12 80.1 4.5 56 316-371 57-114 (124)
176 1uep_A Membrane associated gua 98.5 7.7E-08 2.6E-12 76.7 4.8 55 316-370 40-97 (103)
177 1rgw_A ZAsp protein; PDZ, cyph 98.5 1.1E-07 3.7E-12 72.8 5.4 53 316-370 31-85 (85)
178 1uew_A Membrane associated gua 98.5 1.2E-07 4E-12 77.1 5.7 54 316-371 49-105 (114)
179 2yub_A LIMK-2, LIM domain kina 98.5 2.4E-08 8.2E-13 82.0 1.4 56 316-373 50-109 (118)
180 2kv8_A RGS12, regulator of G-p 98.5 2.1E-07 7E-12 71.0 6.6 52 316-369 29-82 (83)
181 2kpk_A Membrane-associated gua 98.5 3.4E-07 1.2E-11 76.1 8.4 55 316-370 49-106 (129)
182 1uez_A KIAA1526 protein; PDZ d 98.5 3.8E-08 1.3E-12 78.1 2.4 55 316-371 41-95 (101)
183 2jre_A C60-1 PDZ domain peptid 98.5 1.2E-07 4E-12 76.2 5.1 54 316-371 50-106 (108)
184 2kom_A Partitioning defective 98.5 1.6E-07 5.4E-12 77.3 6.0 55 316-370 64-121 (121)
185 1wfg_A Regulating synaptic mem 98.5 1.9E-07 6.5E-12 77.9 6.4 55 316-370 71-128 (131)
186 2h2b_A Tight junction protein 98.5 1.2E-07 4.1E-12 75.9 4.7 56 316-372 45-100 (107)
187 2eeh_A PDZ domain-containing p 98.5 5.6E-08 1.9E-12 77.0 2.5 53 316-371 42-96 (100)
188 2koj_A Partitioning defective 98.4 2.3E-07 8E-12 74.8 6.1 56 316-371 45-103 (111)
189 4amh_A Disks large homolog 1; 98.4 1.9E-07 6.6E-12 74.9 5.4 63 316-380 38-104 (106)
190 2d90_A PDZ domain containing p 98.4 2.9E-07 1E-11 73.1 6.0 54 316-371 36-91 (102)
191 2edz_A PDZ domain-containing p 98.4 1.6E-08 5.6E-13 82.2 -1.4 59 316-376 44-104 (114)
192 2eeg_A PDZ and LIM domain prot 98.4 1.9E-07 6.6E-12 73.0 4.8 53 316-370 38-92 (94)
193 3ngh_A PDZ domain-containing p 98.4 1.1E-07 3.8E-12 76.0 3.5 54 316-371 32-87 (106)
194 3rle_A Golgi reassembly-stacki 98.4 1.1E-07 3.7E-12 85.8 3.8 64 316-379 22-86 (209)
195 2o2t_A Multiple PDZ domain pro 98.4 6.6E-08 2.3E-12 78.8 2.1 56 316-373 55-114 (117)
196 1whd_A RGS3, regulator of G-pr 98.4 5.4E-07 1.8E-11 71.4 7.3 53 316-370 42-96 (100)
197 3r68_A Na(+)/H(+) exchange reg 98.4 3.8E-07 1.3E-11 71.3 6.2 54 316-371 35-90 (95)
198 2yt7_A Amyloid beta A4 precurs 98.4 2.6E-07 8.8E-12 73.4 5.3 53 316-368 43-98 (101)
199 1w9e_A Syntenin 1; cell adhesi 98.4 3.2E-07 1.1E-11 79.5 6.1 62 316-377 33-95 (166)
200 1m5z_A GRIP, AMPA receptor int 98.4 2.9E-07 9.8E-12 71.4 5.1 51 316-368 38-90 (91)
201 2djt_A Unnamed protein product 98.4 3.4E-07 1.2E-11 72.9 5.6 54 316-371 44-100 (104)
202 2kjd_A Sodium/hydrogen exchang 98.4 1.8E-07 6.2E-12 77.4 3.7 57 316-373 39-97 (128)
203 2vwr_A Ligand of NUMB protein 98.4 2.4E-07 8.1E-12 72.5 4.2 54 316-371 35-91 (95)
204 2rcz_A Tight junction protein 98.4 4.2E-07 1.4E-11 68.5 5.4 52 316-369 27-81 (81)
205 1n7e_A AMPA receptor interacti 98.4 4.7E-07 1.6E-11 71.1 5.7 54 316-371 36-92 (97)
206 2vsv_A Rhophilin-2; scaffold p 98.3 6E-07 2E-11 72.5 6.2 55 316-371 50-106 (109)
207 1wfv_A Membrane associated gua 98.3 4.1E-07 1.4E-11 72.1 4.8 54 316-371 42-98 (103)
208 2q9v_A Membrane-associated gua 98.3 2.5E-07 8.5E-12 71.6 3.4 54 316-369 33-89 (90)
209 2awx_A Synapse associated prot 98.3 3.1E-07 1.1E-11 73.3 3.9 61 316-378 39-102 (105)
210 3sfj_A TAX1-binding protein 3; 98.3 5.3E-07 1.8E-11 71.7 5.1 52 316-368 51-104 (104)
211 2r4h_A Membrane-associated gua 98.3 8.7E-07 3E-11 71.7 6.4 54 316-371 55-111 (112)
212 3soe_A Membrane-associated gua 98.3 1E-06 3.5E-11 71.5 6.7 53 322-374 44-98 (113)
213 2edv_A FERM and PDZ domain-con 98.3 7.8E-07 2.7E-11 69.9 5.8 51 316-369 37-89 (96)
214 1d5g_A Human phosphatase HPTP1 98.3 8.2E-07 2.8E-11 69.5 5.9 53 316-370 39-94 (96)
215 2fne_A Multiple PDZ domain pro 98.3 6.5E-07 2.2E-11 73.1 5.4 54 316-371 59-115 (117)
216 2db5_A INAD-like protein; PDZ 98.3 9.5E-07 3.2E-11 73.1 6.5 54 316-371 60-117 (128)
217 1g9o_A NHE-RF; PDZ domain, com 98.3 6E-07 2.1E-11 69.5 4.9 55 316-371 33-89 (91)
218 1va8_A Maguk P55 subfamily mem 98.3 6.3E-07 2.1E-11 72.6 5.1 54 316-371 54-110 (113)
219 3rle_A Golgi reassembly-stacki 98.3 3.4E-07 1.2E-11 82.5 3.9 61 316-378 118-181 (209)
220 3axa_A Afadin, nectin-3, prote 98.3 1.1E-06 3.9E-11 70.1 6.5 54 316-371 44-100 (106)
221 2opg_A Multiple PDZ domain pro 98.3 7.5E-07 2.6E-11 70.0 5.3 56 316-373 36-94 (98)
222 1kwa_A Hcask/LIN-2 protein; PD 98.3 7.2E-07 2.5E-11 68.9 5.0 54 316-371 31-87 (88)
223 2eno_A Synaptojanin-2-binding 98.3 1.4E-06 4.8E-11 71.2 6.9 54 316-371 53-109 (120)
224 2fcf_A Multiple PDZ domain pro 98.3 6.8E-07 2.3E-11 70.9 4.8 53 316-370 45-100 (103)
225 1ujd_A KIAA0559 protein; PDZ d 98.3 9.1E-07 3.1E-11 72.1 5.5 54 316-371 55-111 (117)
226 2ego_A General receptor for ph 98.3 1.1E-06 3.9E-11 68.8 5.9 51 316-368 43-95 (96)
227 2qbw_A PDZ-fibronectin fusion 98.3 1.2E-06 4E-11 77.7 6.6 63 316-381 30-97 (195)
228 2i1n_A Discs, large homolog 3; 98.3 8.9E-07 3E-11 70.2 5.2 55 316-372 40-97 (102)
229 1vae_A Rhophilin 2, rhophilin, 98.3 9.9E-07 3.4E-11 71.4 5.6 52 316-368 42-95 (111)
230 1p1d_A PDZ45, glutamate recept 98.3 1E-06 3.6E-11 78.3 6.1 55 316-370 42-99 (196)
231 1y7n_A Amyloid beta A4 precurs 98.2 9.8E-07 3.4E-11 68.6 5.2 51 316-368 37-89 (90)
232 1wi2_A Riken cDNA 2700099C19; 98.2 6.8E-07 2.3E-11 71.2 4.3 52 316-370 47-100 (104)
233 2fe5_A Presynaptic protein SAP 98.2 1.2E-06 3.9E-11 68.3 5.6 53 316-370 39-94 (94)
234 2byg_A Channel associated prot 98.2 1.1E-06 3.8E-11 71.7 5.4 53 316-370 60-115 (117)
235 2yuy_A RHO GTPase activating p 98.2 4.4E-07 1.5E-11 75.1 3.0 53 316-370 67-121 (126)
236 3qik_A Phosphatidylinositol 3, 98.2 6.9E-07 2.4E-11 70.8 3.9 51 316-366 45-98 (101)
237 3qe1_A Sorting nexin-27, G pro 98.2 9.7E-07 3.3E-11 70.6 4.9 54 316-371 49-104 (107)
238 1um1_A KIAA1849 protein, RSGI 98.2 6.9E-08 2.4E-12 77.8 -1.9 61 316-378 42-105 (110)
239 2ejy_A 55 kDa erythrocyte memb 98.2 1E-06 3.5E-11 69.5 4.9 51 316-368 42-95 (97)
240 2pka_B Kallikrein A; serine pr 98.2 4.7E-06 1.6E-10 70.9 9.4 99 197-297 6-121 (152)
241 2qt5_A Glutamate receptor-inte 98.2 2.7E-06 9.2E-11 75.7 8.2 53 316-370 39-94 (200)
242 2dlu_A INAD-like protein; PDZ 98.2 1.3E-06 4.5E-11 70.3 5.6 54 316-371 44-100 (111)
243 1lvm_A Catalytic domain of the 98.2 7.4E-05 2.5E-09 67.3 17.5 165 125-317 22-194 (229)
244 3k1r_A Harmonin; protein-prote 98.2 2.2E-06 7.5E-11 76.1 7.4 53 316-371 116-170 (192)
245 2qg1_A Multiple PDZ domain pro 98.2 1.7E-06 5.9E-11 67.1 5.9 53 316-370 35-90 (92)
246 4a8c_A Periplasmic PH-dependen 98.2 2.7E-06 9.2E-11 85.1 8.9 65 316-382 369-433 (436)
247 2edp_A Fragment, shroom family 98.2 9.5E-07 3.2E-11 69.9 4.4 54 316-371 41-96 (100)
248 2iwo_A Multiple PDZ domain pro 98.2 4.1E-07 1.4E-11 74.7 2.3 56 316-373 59-117 (120)
249 1v62_A KIAA1719 protein; struc 98.2 7.2E-07 2.5E-11 72.8 3.8 54 316-371 48-104 (117)
250 1wha_A KIAA0147 protein, scrib 98.2 1.2E-06 4E-11 69.9 5.0 53 316-370 44-99 (105)
251 2dmz_A INAD-like protein; PDZ 98.2 5.5E-07 1.9E-11 74.6 3.1 56 316-373 52-110 (129)
252 2jik_A Synaptojanin-2 binding 98.2 1.2E-06 4.1E-11 69.3 4.9 53 316-370 43-98 (101)
253 2iwn_A Multiple PDZ domain pro 98.2 1.3E-06 4.5E-11 68.2 4.9 54 316-371 39-95 (97)
254 3i4w_A Disks large homolog 4; 98.2 8.3E-07 2.8E-11 70.5 3.8 53 316-370 41-96 (104)
255 1v6b_A Harmonin isoform A1; st 98.2 2.8E-07 9.5E-12 75.4 1.0 53 316-368 49-106 (118)
256 3cbz_A Dishevelled-2; PDZ doma 98.2 1.1E-06 3.6E-11 70.7 4.4 57 316-372 39-99 (108)
257 2e7k_A Maguk P55 subfamily mem 98.2 1.4E-06 4.9E-11 67.7 4.8 52 316-369 35-88 (91)
258 1qav_A Alpha-1 syntrophin (res 98.2 2E-06 6.9E-11 66.4 5.6 51 316-368 36-89 (90)
259 3pv2_A DEGQ; trypsin fold, PDZ 98.2 1.7E-06 5.8E-11 87.0 6.5 60 316-377 392-451 (451)
260 1tp5_A Presynaptic density pro 98.2 1.4E-06 4.7E-11 71.1 4.7 55 316-370 44-99 (119)
261 2dm8_A INAD-like protein; PDZ 98.2 2.2E-06 7.4E-11 69.6 5.7 55 316-372 49-106 (116)
262 3gsl_A Disks large homolog 4; 98.2 2.1E-06 7.1E-11 75.7 5.9 65 316-380 41-108 (196)
263 1q7x_A PDZ2B domain of PTP-BAS 98.1 1.6E-06 5.4E-11 69.5 4.6 54 316-371 48-104 (108)
264 3b76_A E3 ubiquitin-protein li 98.1 2.9E-06 1E-10 69.4 6.2 52 316-369 59-113 (118)
265 2dkr_A LIN-7 homolog B; LIN-7B 98.1 2.2E-06 7.6E-11 66.5 5.2 53 316-370 36-91 (93)
266 2g5m_B Neurabin-2; spinophilin 98.1 1.5E-07 5.2E-12 76.2 -1.6 61 316-378 41-104 (113)
267 2qkv_A Inactivation-NO-after-p 98.1 1.3E-06 4.6E-11 68.5 3.6 52 316-369 37-91 (96)
268 2iwq_A Multiple PDZ domain pro 98.1 1.8E-06 6.2E-11 71.1 4.6 53 316-370 65-120 (123)
269 1mfg_A ERB-B2 interacting prot 98.1 1.7E-06 5.9E-11 67.5 4.2 51 316-369 41-93 (95)
270 1x6d_A Interleukin-16; PDZ dom 98.1 8.1E-07 2.8E-11 72.5 2.2 57 316-373 48-107 (119)
271 2la8_A Inactivation-NO-after-p 98.1 1.2E-06 4.1E-11 70.3 3.2 52 316-369 31-85 (106)
272 1fc6_A Photosystem II D1 prote 98.1 7.8E-06 2.7E-10 80.5 9.7 63 316-379 105-172 (388)
273 1wg6_A Hypothetical protein (r 98.1 1.3E-06 4.3E-11 72.5 3.4 55 316-370 61-123 (127)
274 1q3o_A Shank1; PDZ, GKAP, pept 98.1 3E-06 1E-10 68.0 5.5 52 316-369 51-104 (109)
275 1wi4_A Synip, syntaxin binding 98.1 1.5E-06 5.3E-11 69.9 3.6 55 316-370 47-106 (109)
276 2qt5_A Glutamate receptor-inte 98.1 2.3E-06 7.9E-11 76.1 5.1 56 316-373 141-199 (200)
277 1nf3_C PAR-6B; semi-CRIB motif 98.1 1.9E-06 6.4E-11 71.4 4.0 53 316-370 71-126 (128)
278 2eei_A PDZ domain-containing p 98.1 3.5E-06 1.2E-10 67.1 5.2 54 316-371 38-93 (106)
279 1r6j_A Syntenin 1; PDZ, membra 98.1 6.3E-06 2.2E-10 62.9 6.0 50 316-367 29-80 (82)
280 1n7t_A 99-MER peptide of densi 98.1 3.2E-06 1.1E-10 67.0 4.5 51 316-369 49-101 (103)
281 2daz_A INAD-like protein; PDZ 98.0 1.9E-06 6.5E-11 70.9 3.2 54 316-371 57-113 (124)
282 3gsl_A Disks large homolog 4; 98.0 3.3E-06 1.1E-10 74.4 4.8 56 316-373 136-194 (196)
283 4e34_A Golgi-associated PDZ an 98.0 1.1E-05 3.7E-10 61.8 7.1 50 316-367 34-86 (87)
284 3o46_A Maguk P55 subfamily mem 98.0 4.6E-06 1.6E-10 64.8 5.0 54 316-371 34-90 (93)
285 2dc2_A GOPC, golgi associated 98.0 1.1E-05 3.9E-10 64.0 7.4 54 316-371 41-97 (103)
286 1x5n_A Harmonin; PDZ domain, u 98.0 1.7E-07 5.8E-12 76.0 -4.0 59 316-377 47-108 (114)
287 1wf8_A Neurabin-I; PDZ domain, 98.0 2.1E-06 7.1E-11 68.7 2.5 53 316-370 46-101 (107)
288 2ehr_A INAD-like protein; PDZ 98.0 5.5E-06 1.9E-10 67.3 5.0 53 316-370 56-111 (117)
289 3e17_A Tight junction protein 98.0 1.5E-05 5E-10 61.5 7.0 52 316-369 27-81 (88)
290 2cs5_A Tyrosine-protein phosph 98.0 2.2E-06 7.6E-11 69.9 2.2 60 316-375 47-112 (119)
291 1ufx_A KIAA1526 protein; PDZ d 98.0 5.8E-06 2E-10 65.8 4.4 55 316-370 38-98 (103)
292 1um7_A Synapse-associated prot 98.0 4.3E-06 1.5E-10 67.3 3.6 53 316-370 45-100 (113)
293 3hpk_A Protein interacting wit 97.9 1.6E-05 5.4E-10 65.4 6.9 50 316-367 51-103 (125)
294 3nfk_A Tyrosine-protein phosph 97.9 6.2E-06 2.1E-10 65.8 4.3 53 316-368 49-107 (107)
295 1p1d_A PDZ45, glutamate recept 97.9 6.5E-06 2.2E-10 73.0 4.7 52 316-369 141-195 (196)
296 1uhp_A Hypothetical protein KI 97.9 4.7E-06 1.6E-10 66.6 3.4 53 316-370 47-102 (107)
297 3l4f_D SH3 and multiple ankyri 97.9 1.1E-05 3.6E-10 67.3 5.6 54 316-371 71-126 (132)
298 2gzv_A PRKCA-binding protein; 97.9 1.1E-05 3.7E-10 65.5 5.3 51 316-368 56-109 (114)
299 3tsz_A Tight junction protein 97.9 8.4E-06 2.9E-10 80.3 5.1 55 316-370 37-93 (391)
300 1uju_A Scribble; PDZ domain, c 97.9 2.2E-06 7.4E-11 69.1 0.7 53 316-370 50-105 (111)
301 3r0h_A INAD, inactivation-NO-a 97.9 1E-05 3.5E-10 72.1 5.1 62 316-379 51-120 (206)
302 2krg_A Na(+)/H(+) exchange reg 97.9 2.6E-06 9E-11 77.1 1.2 55 316-372 39-96 (216)
303 2csj_A TJP2 protein; PDZ domai 97.9 1.6E-06 5.4E-11 70.6 -0.3 55 316-373 52-108 (117)
304 3kzd_A TIAM-1, T-lymphoma inva 97.9 1.8E-05 6.2E-10 61.9 5.8 47 316-366 41-89 (94)
305 2d92_A INAD-like protein; PDZ 97.9 1E-05 3.4E-10 64.8 4.4 52 316-368 50-104 (108)
306 2d8i_A T-cell lymphoma invasio 97.9 8.8E-06 3E-10 66.1 4.1 50 316-369 50-101 (114)
307 3suz_A Amyloid beta A4 precurs 97.9 9.2E-06 3.1E-10 80.0 4.6 62 316-377 238-302 (388)
308 1i16_A Interleukin 16, LCF; cy 97.8 1.3E-05 4.3E-10 66.6 4.5 55 316-371 63-120 (130)
309 2z17_A Pleckstrin homology SEC 97.8 7.7E-06 2.6E-10 65.0 3.0 48 316-365 54-103 (104)
310 3shw_A Tight junction protein 97.8 1.3E-05 4.5E-10 80.4 5.1 55 316-370 29-85 (468)
311 3egg_C Spinophilin; PP1, serin 97.8 2.6E-05 9.1E-10 67.8 5.9 51 316-368 117-170 (170)
312 3k50_A Putative S41 protease; 97.7 1.1E-05 3.7E-10 79.8 2.9 53 316-371 96-148 (403)
313 1ky9_A Protease DO, DEGP, HTRA 97.6 7.6E-06 2.6E-10 82.1 0.0 59 316-376 389-447 (448)
314 1z87_A Alpha-1-syntrophin; pro 97.6 3.5E-05 1.2E-09 71.7 4.2 53 316-370 109-164 (263)
315 3r0h_A INAD, inactivation-NO-a 97.6 6E-05 2E-09 67.0 4.8 52 316-369 142-196 (206)
316 3gge_A PDZ domain-containing p 97.5 0.00025 8.7E-09 55.3 7.4 54 316-369 34-90 (95)
317 2lob_A Golgi-associated PDZ an 96.7 1.4E-05 4.6E-10 64.7 0.0 49 316-366 59-110 (112)
318 3qzr_A 3C protein; chymotrypsi 97.4 0.031 1E-06 48.9 19.9 160 123-313 13-178 (187)
319 1k32_A Tricorn protease; prote 97.3 0.00029 9.9E-09 77.4 7.9 56 321-378 767-825 (1045)
320 2hal_A Hepatitis A protease 3C 97.3 0.0034 1.2E-07 56.3 13.5 175 119-315 3-206 (212)
321 3zve_A 3C protease; hydrolase, 97.3 0.0079 2.7E-07 52.9 15.3 146 152-314 23-175 (190)
322 4dcd_A Protease 3C, genome pol 97.3 0.02 6.8E-07 50.2 17.4 145 152-313 30-181 (190)
323 3q3y_A HEVB EV93 3C protease; 97.2 0.039 1.3E-06 48.2 18.6 160 124-314 12-177 (191)
324 1w9e_A Syntenin 1; cell adhesi 97.2 1.6E-05 5.6E-10 68.6 -2.8 52 316-378 113-164 (166)
325 2pka_A Kallikrein A; serine pr 97.1 0.001 3.5E-08 49.7 6.4 28 152-182 24-51 (80)
326 1cqq_A Type 2 rhinovirus 3C pr 97.1 0.067 2.3E-06 46.5 18.5 144 153-313 24-174 (180)
327 2b0f_A Picornain 3C (protease 97.0 0.016 5.6E-07 50.5 13.8 141 154-313 25-173 (182)
328 2xkx_A Disks large homolog 4; 97.0 0.00064 2.2E-08 72.1 5.5 54 316-371 95-151 (721)
329 2xkx_A Disks large homolog 4; 96.9 0.00071 2.4E-08 71.7 5.2 56 316-373 190-248 (721)
330 2bhg_A Foot-and-mouth disease 96.4 0.02 7E-07 51.1 10.3 150 153-313 31-195 (209)
331 4fln_A Protease DO-like 2, chl 96.2 0.0083 2.8E-07 61.2 7.4 55 316-372 421-475 (539)
332 3suz_A Amyloid beta A4 precurs 95.9 0.0014 4.6E-08 64.4 0.0 52 316-369 321-374 (388)
333 2ijd_1 Picornain 3C, RNA-direc 95.6 0.52 1.8E-05 49.0 18.4 133 154-297 25-164 (644)
334 3e90_B NS3 protease; trypsin-l 93.8 0.14 4.7E-06 44.1 6.8 131 124-294 21-154 (198)
335 2fom_B Polyprotein; flavivirus 93.8 0.12 4.1E-06 44.2 6.4 132 123-294 16-150 (185)
336 3u1j_B Serine protease NS3; se 93.8 0.18 6E-06 43.3 7.3 131 124-294 26-159 (191)
337 2fp7_B Serine protease NS3; fl 93.6 0.11 3.9E-06 43.9 5.9 113 152-294 20-135 (172)
338 2ggv_B NS3, non-structural pro 93.6 0.11 3.9E-06 44.3 5.9 131 125-295 17-150 (185)
339 3lkw_A Fusion protein of nonst 93.1 0.2 6.8E-06 44.4 6.8 112 153-294 86-200 (236)
340 4ash_A NS6 protease; hydrolase 90.9 1.4 4.8E-05 36.6 9.0 135 152-299 15-164 (185)
341 1yph_E Chymotrypsin A, chain C 90.3 0.12 4.2E-06 39.7 2.1 26 273-298 41-69 (97)
342 1wxr_A Haemoglobin protease; h 90.0 0.64 2.2E-05 50.4 8.0 80 152-236 56-144 (1048)
343 4agk_A Capsid protein, coat pr 89.8 0.19 6.6E-06 40.6 2.9 28 271-298 101-128 (158)
344 2yew_A Capsid protein, coat pr 89.7 0.21 7.3E-06 44.0 3.3 27 272-298 198-224 (253)
345 1vcp_A Semliki forest virus ca 89.6 0.24 8.2E-06 39.6 3.3 28 271-298 93-120 (149)
346 1svp_A Sindbis virus capsid pr 89.4 0.25 8.6E-06 40.1 3.3 27 272-298 103-129 (161)
347 1ep5_B Capsid protein C, coat 88.9 0.43 1.5E-05 38.6 4.3 28 271-298 100-127 (157)
348 1kxf_A Sindbis virus capsid pr 88.2 0.26 9E-06 43.8 2.9 27 272-298 208-234 (264)
349 2fyq_A Chymotrypsin-like cyste 85.1 5.1 0.00018 33.4 8.8 135 152-299 26-175 (194)
350 3su6_A NS3 protease, NS4A prot 69.7 1.9 6.6E-05 36.9 1.9 25 274-298 155-179 (203)
351 3s6n_G Small nuclear ribonucle 56.0 32 0.0011 24.8 6.2 33 176-208 15-47 (76)
352 1i4k_A Putative snRNP SM-like 53.6 23 0.0008 25.4 5.2 33 176-208 15-47 (77)
353 1h64_1 SnRNP SM-like protein; 52.7 22 0.00076 25.5 4.9 33 176-208 15-47 (75)
354 1d3b_B Protein (small nuclear 52.4 21 0.00071 26.7 4.9 33 176-208 15-47 (91)
355 1th7_A SnRNP-2, small nuclear 51.5 23 0.0008 25.8 4.9 33 176-208 20-52 (81)
356 4hcz_A PHD finger protein 1; p 50.4 51 0.0017 22.6 5.9 38 172-209 4-41 (58)
357 1mgq_A SM-like protein; LSM, R 48.6 27 0.00094 25.6 4.9 33 176-208 26-58 (83)
358 1d3b_A Protein (small nuclear 47.4 34 0.0012 24.6 5.2 33 176-208 16-48 (75)
359 3s6n_F Small nuclear ribonucle 46.9 33 0.0011 25.4 5.2 59 176-236 17-75 (86)
360 1ljo_A Archaeal SM-like protei 46.7 36 0.0012 24.5 5.2 33 176-208 16-49 (77)
361 4esy_A CBS domain containing m 46.5 11 0.00036 31.2 2.6 22 276-297 47-68 (170)
362 4emk_B U6 snRNA-associated SM- 46.4 26 0.00088 25.2 4.4 32 176-207 15-46 (75)
363 4emg_A Probable U6 snRNA-assoc 46.0 31 0.0011 26.0 4.9 33 176-208 20-52 (93)
364 1i8f_A Putative snRNP SM-like 45.6 26 0.0009 25.5 4.4 33 176-208 22-54 (81)
365 4emk_C U6 snRNA-associated SM- 45.3 33 0.0011 26.9 5.2 33 176-208 34-66 (113)
366 3dor_A Protein CT_858, CPAF; m 45.2 18 0.00063 36.7 4.5 56 327-382 109-188 (583)
367 3bw1_A SMX4 protein, U6 snRNA- 45.1 29 0.00099 26.3 4.7 32 176-207 21-52 (96)
368 4emk_A U6 snRNA-associated SM- 44.9 33 0.0011 26.0 4.9 33 176-208 31-63 (94)
369 1y96_A Gemin6, SIP2, GEM-assoc 44.7 47 0.0016 24.8 5.6 32 176-207 18-50 (86)
370 1b34_A Protein (small nuclear 44.1 49 0.0017 26.1 6.1 61 176-238 13-73 (119)
371 1b34_B Protein (small nuclear 42.9 37 0.0013 26.8 5.2 34 175-208 39-72 (118)
372 4emh_A Probable U6 snRNA-assoc 39.3 48 0.0016 25.6 5.2 32 176-207 27-58 (105)
373 3pgw_B SM B; protein-RNA compl 39.2 30 0.001 30.8 4.4 32 176-207 15-46 (231)
374 2eqj_A Metal-response element- 39.1 86 0.003 22.1 5.9 38 172-209 14-51 (66)
375 3k6e_A CBS domain protein; str 38.4 17 0.00058 29.8 2.6 22 275-296 45-66 (156)
376 3d3r_A Hydrogenase assembly ch 37.8 50 0.0017 25.5 4.9 45 188-235 26-72 (103)
377 1n9r_A SMF, small nuclear ribo 37.1 45 0.0015 25.1 4.6 33 176-208 32-65 (93)
378 3k6e_A CBS domain protein; str 34.6 20 0.00069 29.3 2.4 16 281-296 118-133 (156)
379 3nqr_A Magnesium and cobalt ef 34.0 21 0.00072 27.6 2.4 20 277-296 98-117 (127)
380 2fwk_A U6 snRNA-associated SM- 33.9 39 0.0013 26.8 3.9 31 176-206 39-69 (121)
381 3lfr_A Putative metal ION tran 32.8 22 0.00076 27.9 2.4 20 277-296 99-118 (136)
382 3gby_A Uncharacterized protein 32.6 23 0.0008 27.3 2.4 20 277-296 98-117 (128)
383 3hf7_A Uncharacterized CBS-dom 32.0 24 0.00081 27.5 2.4 20 277-296 99-118 (130)
384 3i8n_A Uncharacterized protein 31.8 24 0.00082 27.3 2.4 20 277-296 101-120 (130)
385 3jtf_A Magnesium and cobalt ef 31.2 24 0.00081 27.4 2.2 20 277-296 98-117 (129)
386 2jvf_A De novo protein M7; tet 29.9 66 0.0023 23.0 4.1 20 360-379 7-26 (96)
387 3kpb_A Uncharacterized protein 29.5 29 0.00098 26.2 2.4 20 277-296 92-111 (122)
388 1m5q_A SMAP3, small nuclear ri 29.0 84 0.0029 25.3 5.2 55 176-236 11-65 (130)
389 3lv9_A Putative transporter; C 28.5 29 0.00098 27.5 2.4 20 277-296 117-136 (148)
390 3oco_A Hemolysin-like protein 28.5 27 0.00093 28.0 2.2 20 277-296 115-134 (153)
391 3oi8_A Uncharacterized protein 28.4 29 0.00098 28.0 2.4 20 277-296 132-151 (156)
392 2y9a_D Small nuclear ribonucle 27.6 1.2E+02 0.0041 24.2 5.8 60 176-237 16-75 (126)
393 1z8r_A Coxsackievirus B4 polyp 27.4 88 0.003 26.2 5.1 31 266-297 113-143 (166)
394 3lqn_A CBS domain protein; csg 27.2 32 0.0011 27.2 2.4 16 281-296 119-134 (150)
395 2nyc_A Nuclear protein SNF4; b 26.9 33 0.0011 26.7 2.4 20 277-296 113-132 (144)
396 2m0o_A PHD finger protein 1; t 26.3 81 0.0028 22.9 4.0 35 175-209 30-64 (79)
397 3kxr_A Magnesium transporter, 26.2 33 0.0011 29.5 2.4 21 276-296 145-165 (205)
398 2o8m_A Protease; NS3, NS4A, vi 26.2 29 0.00098 30.0 1.9 22 275-296 146-167 (200)
399 2ef7_A Hypothetical protein ST 25.8 35 0.0012 26.2 2.4 20 277-296 97-116 (133)
400 4gqw_A CBS domain-containing p 25.7 36 0.0012 26.7 2.4 21 276-296 114-134 (152)
401 3ctu_A CBS domain protein; str 25.4 36 0.0012 27.1 2.4 16 281-296 118-133 (156)
402 1p0z_A Sensor kinase CITA; tra 25.3 36 0.0012 26.8 2.3 18 281-298 106-123 (131)
403 2rih_A Conserved protein with 24.9 37 0.0013 26.5 2.4 20 277-296 100-119 (141)
404 3s6n_E Small nuclear ribonucle 24.8 96 0.0033 23.2 4.5 31 178-208 29-63 (92)
405 3ghd_A A cystathionine beta-sy 24.5 38 0.0013 23.7 2.1 20 276-296 21-40 (70)
406 2uv4_A 5'-AMP-activated protei 24.4 41 0.0014 26.7 2.6 20 277-296 51-70 (152)
407 3lhh_A CBS domain protein; str 24.4 37 0.0013 27.8 2.4 14 282-295 141-154 (172)
408 2uv4_A 5'-AMP-activated protei 24.4 39 0.0013 26.9 2.4 20 277-296 123-142 (152)
409 3lqn_A CBS domain protein; csg 24.3 41 0.0014 26.5 2.5 21 276-296 46-66 (150)
410 2hrv_A 2A cysteine proteinase; 24.2 93 0.0032 25.4 4.5 30 267-297 94-123 (142)
411 3sl7_A CBS domain-containing p 24.2 39 0.0013 27.5 2.4 14 282-295 133-146 (180)
412 3ctu_A CBS domain protein; str 23.5 44 0.0015 26.6 2.6 21 276-296 46-66 (156)
413 3kpb_A Uncharacterized protein 23.4 47 0.0016 24.9 2.7 21 276-296 30-50 (122)
414 3ocm_A Putative membrane prote 23.2 38 0.0013 28.1 2.2 20 277-296 129-148 (173)
415 4a4f_A SurviVal of motor neuro 23.0 1.9E+02 0.0063 19.8 6.0 34 175-208 12-46 (64)
416 3fio_A A cystathionine beta-sy 22.8 43 0.0015 22.5 2.1 20 276-296 21-40 (70)
417 2o16_A Acetoin utilization pro 22.7 45 0.0015 26.8 2.5 21 276-296 34-54 (160)
418 1yav_A Hypothetical protein BS 22.5 46 0.0016 26.6 2.6 21 276-296 45-65 (159)
419 2emq_A Hypothetical conserved 22.4 44 0.0015 26.5 2.4 16 281-296 115-130 (157)
420 1o50_A CBS domain-containing p 22.0 45 0.0015 26.7 2.4 20 277-296 125-144 (157)
421 3i8n_A Uncharacterized protein 21.7 57 0.0019 25.0 2.9 21 276-296 37-58 (130)
422 2yzi_A Hypothetical protein PH 21.7 49 0.0017 25.5 2.5 21 276-296 36-56 (138)
423 1yav_A Hypothetical protein BS 21.5 47 0.0016 26.5 2.4 16 281-296 118-133 (159)
424 3by8_A Sensor protein DCUS; hi 21.0 48 0.0017 26.5 2.3 18 281-298 111-128 (142)
425 3nqr_A Magnesium and cobalt ef 20.8 54 0.0019 25.0 2.6 22 276-297 34-56 (127)
426 4gqw_A CBS domain-containing p 20.7 56 0.0019 25.5 2.7 21 276-296 36-56 (152)
427 2emq_A Hypothetical conserved 20.7 52 0.0018 26.1 2.5 21 276-296 42-62 (157)
428 3l2b_A Probable manganase-depe 20.4 49 0.0017 28.8 2.4 22 276-297 215-236 (245)
429 2p9m_A Hypothetical protein MJ 20.1 56 0.0019 25.1 2.5 22 276-297 37-58 (138)
No 1
>3qo6_A Protease DO-like 1, chloroplastic; protease, HTRA, PH-sensor, hydrolase, photosynthesis; 2.50A {Arabidopsis thaliana}
Probab=100.00 E-value=3e-48 Score=380.51 Aligned_cols=275 Identities=87% Similarity=1.272 Sum_probs=243.9
Q ss_pred cccCccchhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeE
Q 016647 109 RKLQTDELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAY 188 (385)
Q Consensus 109 ~~~~~~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~ 188 (385)
....+++.+..++++++.+|||.|.......+.|..+..+.+.+.||||||+++||||||+||+.+...+.|.+.+++.+
T Consensus 10 ~~~~~~e~~~~~~~~~~~~sVV~I~~~~~~~~~~~~~~~~~~~g~GSG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~ 89 (348)
T 3qo6_A 10 KKLQTDELATVRLFQENTPSVVYITNLAVRQDAFTLDVLEVPQGSGSGFVWDKQGHIVTNYHVIRGASDLRVTLADQTTF 89 (348)
T ss_dssp CCCCHHHHHHHHHHHHHGGGEEEEEEEEEEECSSSCCEEEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEE
T ss_pred cccCcchhHHHHHHHHhCCCEEEEEEEeecccccccccccccCceEEEEEEeCCCEEEECHHHhCCCcEEEEEECCCCEE
Confidence 34556788889999999999999999887777776655555678999999999999999999999999999999999999
Q ss_pred eeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEE
Q 016647 189 DAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI 268 (385)
Q Consensus 189 ~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i 268 (385)
+++++..|+.+||||||++.+...+++++|+++..++.|+.|+++|||++...+++.|.++...+.......+.....++
T Consensus 90 ~a~~v~~d~~~DlAlLkl~~~~~~~~~i~l~~s~~~~~G~~v~~iG~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i 169 (348)
T 3qo6_A 90 DAKVVGFDQDKDVAVLRIDAPKNKLRPIPVGVSADLLVGQKVFAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVI 169 (348)
T ss_dssp EEEEEEEEGGGTEEEEECCCCGGGCCCCCBCCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECCSSSSSCEEEEE
T ss_pred EEEEEEEcCcCCEEEEEEcCCCCCceeEEecCcccCCCCCEEEEEECCCCCCCcEeEEEEEeeccccccccCCCcccCEE
Confidence 99999999999999999987644688999988778999999999999999889999999999888766544444556789
Q ss_pred EEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc---------------------------------
Q 016647 269 QTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT--------------------------------- 315 (385)
Q Consensus 269 ~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~--------------------------------- 315 (385)
++|+.+++|+|||||+|.+|+||||+++.+.+.+...++||+||++.
T Consensus 170 ~~da~i~~G~SGGPLvn~~G~vvGI~s~~~~~~~~~~g~gfaiP~~~~~~~~~~l~~~g~~~~~~lGi~~~~~~~~~~~~ 249 (348)
T 3qo6_A 170 QTDAAINPGNSGGPLLDSSGTLIGINTAIYSPSGASSGVGFSIPVDTVGGIVDQLVRFGKVTRPILGIKFAPDQSVEQLG 249 (348)
T ss_dssp EECSCCCTTCTTCEEECTTSCEEEEEEEEECSSSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCCEECCTTTTTTTT
T ss_pred EEeCCcCCCCcHHHhhCCCCeEEEEEEeeecCCCCcccEEEEEEecchHHHHHHHHhCCceeeeecCcEEccchhhhhcC
Confidence 99999999999999999999999999998877666789999999986
Q ss_pred -------cccccccccccCCCC-----------CcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEE
Q 016647 316 -------GLLSTKRDAYGRLIL-----------GDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVK 377 (385)
Q Consensus 316 -------~v~~~~~a~~~gl~~-----------GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 377 (385)
.+.+++|++++||++ ||+|++|||++|.++.|+.++|...++|++++|+|+|+|+.++++++
T Consensus 250 ~~Gv~V~~V~~~spA~~AGl~~~~~~~~~~l~~GDvI~~ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 329 (348)
T 3qo6_A 250 VSGVLVLDAPPSGPAGKAGLQSTKRDGYGRLVLGDIITSVNGTKVSNGSDLYRILDQCKVGDEVTVEVLRGDHKEKISVT 329 (348)
T ss_dssp CSSEEEEECCSSSHHHHHTCCCCEECSSSCEECCCEECEETTBCCSSSHHHHHHHTTCCTTCEEEEEEECSSSEEEEEEE
T ss_pred CceEEEEEecCCChHHHcCCccccccccCCCCCCCEEEEECCEEeCCHHHHHHHHHhCCCcCEEEEEEEECCEEEEEEEE
Confidence 233567888999999 99999999999999999999999888999999999999999999999
Q ss_pred eecCCC
Q 016647 378 LEPKPD 383 (385)
Q Consensus 378 ~~~~~~ 383 (385)
+.+.++
T Consensus 330 l~~~~~ 335 (348)
T 3qo6_A 330 LEPKPD 335 (348)
T ss_dssp CEECC-
T ss_pred EccCCC
Confidence 988765
No 2
>3stj_A Protease DEGQ; serine protease, PDZ domain, protease, chaperone, DEGP, DEGQ hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=5e-47 Score=370.98 Aligned_cols=263 Identities=37% Similarity=0.583 Sum_probs=223.8
Q ss_pred hHHHHHHHhCCceEEEEEeeeccC-----ccccccc---------cCCCeEEEEEEEcCC-CEEEecccccCCCCeEEEE
Q 016647 117 ATVRLFQENTPSVVNITNLAARQD-----AFTLDVL---------EVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (385)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~~-----~~~~~~~---------~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V~ 181 (385)
++.++++++.||||.|.+...... +|..+.+ ....+.||||||+++ ||||||+||+.++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHVv~~~~~i~V~ 93 (345)
T 3stj_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (345)
T ss_dssp BSHHHHHHHGGGEEEEEEEEC------------------------CCEEEEEEEEEEETTTTEEEECHHHHTTEEEEEEE
T ss_pred CHHHHHHHhCCcEEEEEEEEeecccccCchhhhhhcccccccccCcccceeEEEEEEECCCCEEEEChHHhCCCCEEEEE
Confidence 467899999999999988764431 1110111 112478999999988 9999999999999999999
Q ss_pred ecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCC
Q 016647 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (385)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~ 261 (385)
+.|++.+++++++.|+.+||||||++.+. .+++++++++..++.|++|+++|||++...+++.|+|+...+... ..
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~l~~s~~~~~G~~V~aiG~p~g~~~~vt~G~Vs~~~~~~~---~~ 169 (345)
T 3stj_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---NL 169 (345)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSCC-SCCCCCBCCGGGCCTTBEEEEEECGGGCSCEEEEEEEEEEEECCS---SS
T ss_pred eCCCcEEEEEEEEEcCCCCEEEEEEcccC-CCceEeecCcccCCCCCEEEEEECCCCCCCcEEeeEEeeeccccc---CC
Confidence 99999999999999999999999997653 788999988778999999999999999999999999998876511 11
Q ss_pred CCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc--------------------------
Q 016647 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT-------------------------- 315 (385)
Q Consensus 262 ~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~-------------------------- 315 (385)
.....++++|+.+++|+|||||||.+|+||||+++...+.++..++||+||++.
T Consensus 170 ~~~~~~iq~da~i~~GnSGGPLvn~~G~vVGI~s~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~~~~lGv~~~~~ 249 (345)
T 3stj_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTEM 249 (345)
T ss_dssp SSSCCEEEECSCCCTTCTTCEEECTTSCEEEEEEEEECTTSSCSSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEEC
T ss_pred CCccCEEEEecccCCCcCccceeCCCCEEEEEEeccccCCCCcceeEEEEehHHHHHHHHHHHhcccccccccceeeEee
Confidence 234578999999999999999999999999999998887777789999999885
Q ss_pred -------------------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEE
Q 016647 316 -------------------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPV 376 (385)
Q Consensus 316 -------------------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 376 (385)
.+.+++|++++|||+||+|++|||++|.++.+|.+++...++|++++|+|+|+|+.+++++
T Consensus 250 ~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GDvI~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 329 (345)
T 3stj_A 250 SADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVEV 329 (345)
T ss_dssp CHHHHHHTTCSCCSSEEEEEECTTSHHHHHTCCTTCEECEETTEECSCHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEE
T ss_pred cHHHHHhcCCCCCceEEEEEeccCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEE
Confidence 2345678899999999999999999999999999999988899999999999999999999
Q ss_pred EeecCCC
Q 016647 377 KLEPKPD 383 (385)
Q Consensus 377 ~~~~~~~ 383 (385)
++.+.++
T Consensus 330 ~l~~~~~ 336 (345)
T 3stj_A 330 TLDTSTS 336 (345)
T ss_dssp ECEEC--
T ss_pred EEcccCC
Confidence 9988875
No 3
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=100.00 E-value=1.7e-44 Score=363.67 Aligned_cols=263 Identities=37% Similarity=0.574 Sum_probs=226.6
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccC-----cccccc---------ccCCCeEEEEEEEcCC-CEEEecccccCCCCeEEE
Q 016647 116 LATVRLFQENTPSVVNITNLAARQD-----AFTLDV---------LEVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRV 180 (385)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~-----~~~~~~---------~~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V 180 (385)
.++.++++++.||||.|.+...... +|..+. .....+.||||||+++ ||||||+||+.++..+.|
T Consensus 13 ~~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfii~~~~G~IlTn~Hvv~~a~~i~V 92 (436)
T 4a8c_A 13 PSLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISI 92 (436)
T ss_pred CCHHHHHHhhCCcEEEEEEEEeecccccCcchhhhhcccccccccCCcCceEEEEEEEECCCCEEEECHHHhCCCCEEEE
Confidence 4578999999999999988764431 110001 1112578999999988 999999999999999999
Q ss_pred EecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCC
Q 016647 181 TFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT 260 (385)
Q Consensus 181 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~ 260 (385)
.+.|++.++|++++.|+.+||||||++.+. .+++++|+++..+++|++|+++|||++...+++.|+|+...+... .
T Consensus 93 ~~~dg~~~~a~vv~~d~~~DlAllkv~~~~-~l~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~r~~~---~ 168 (436)
T 4a8c_A 93 QLNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---N 168 (436)
T ss_pred EeCCCCEEEEEEEEEcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEEcCCCCCccEEEEEEeeeccccc---C
Confidence 999999999999999999999999997654 789999998888999999999999999999999999998776511 1
Q ss_pred CCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc-------------------------
Q 016647 261 GRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT------------------------- 315 (385)
Q Consensus 261 ~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~------------------------- 315 (385)
......++++|+.+++|+|||||||.+|+||||+++.+.+.++..++||+||++.
T Consensus 169 ~~~~~~~iq~da~i~~GnSGGPl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g~v~r~~lGv~~~~ 248 (436)
T 4a8c_A 169 LEGLENFIQTDASINRGNAGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNMARTLAQQLIDFGEIKRGLLGIKGTE 248 (436)
T ss_pred CCCccCEEEEcCccCCCCCcCcccCCCCEEEEEEeeeccCCCCceeEEEEEehHHHHHHHHHHHhccccccccCceEecc
Confidence 1234578999999999999999999999999999998887767789999999875
Q ss_pred --------------------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEE
Q 016647 316 --------------------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIP 375 (385)
Q Consensus 316 --------------------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 375 (385)
.+.++++++++|||+||+|++|||++|.++.++...+...++|++++|+|+|+|+.++++
T Consensus 249 ~~~~~a~~~gl~~~~G~~V~~V~~~spA~~aGL~~GD~I~~vnG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 328 (436)
T 4a8c_A 249 MSADIAKAFNLDVQRGAFVSEVLPGSGSAKAGVKAGDIITSLNGKPLNSFAELRSRIATTEPGTKVKLGLLRNGKPLEVE 328 (436)
T ss_pred cCHHHHHHhCCCCCcceEEEEECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEE
Confidence 234567889999999999999999999999999999998889999999999999999999
Q ss_pred EEeecCC
Q 016647 376 VKLEPKP 382 (385)
Q Consensus 376 v~~~~~~ 382 (385)
+++.+.+
T Consensus 329 v~l~~~~ 335 (436)
T 4a8c_A 329 VTLDTST 335 (436)
T ss_pred EEECCCC
Confidence 9987765
No 4
>1te0_A Protease DEGS; two domains, serine protease, PDZ, alpha-beta protein, hydro; 2.20A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3gdv_A* 3gcn_A* 3gds_A* 3gdu_A* 3gco_A* 1sot_A 1soz_A 1vcw_A 2r3y_A
Probab=100.00 E-value=1.7e-43 Score=342.64 Aligned_cols=263 Identities=33% Similarity=0.482 Sum_probs=222.3
Q ss_pred cchhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEE
Q 016647 114 DELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV 193 (385)
Q Consensus 114 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv 193 (385)
.+.++.++++++.+|||+|........+ .......+.||||+|+++||||||+||+.+...+.|.+.+++.++++++
T Consensus 7 ~~~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~ 83 (318)
T 1te0_A 7 TPASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLV 83 (318)
T ss_dssp CCCCCHHHHHHHGGGEEEEEEEEECSSS---SCCEEEEEEEEEEECSTTCEEEEEHHHHTTCSEEEEECTTSCEEEEEEE
T ss_pred ccccHHHHHHhcCCcEEEEEeEeccCCc---ccccccCccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEE
Confidence 3445678999999999999987644321 1111234789999999999999999999999999999999999999999
Q ss_pred EECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccc
Q 016647 194 GFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAA 273 (385)
Q Consensus 194 ~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~ 273 (385)
.+|+.+||||||++.+ ..+++++|+++..++.|+.|+++|||++....++.|+|+...+.... ......++++|+.
T Consensus 84 ~~d~~~DlAllk~~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~---~~~~~~~i~~d~~ 159 (318)
T 1te0_A 84 GSDSLTDLAVLIIKAT-GGLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLN---PTGRQNFLQTDAS 159 (318)
T ss_dssp EEETTTTEEEEECCCS-SCCCCCCCCTTCCCCTTCEEEEECCCSSSSCCEEEEEEEECCCCCCC---TTCSCCSEEESSC
T ss_pred EeCCCceEEEEEEeCC-CCCceEEeeCccCCCCCCEEEEEEcCCCCCCcEEeeEEecccccccC---CCCcCCEEEECCC
Confidence 9999999999999875 26889999876678999999999999998889999999976643211 1223467899999
Q ss_pred cCCCCCCceeeCCCccEEEEeecccCCCC---CCCCceeeecccc-----------------------------------
Q 016647 274 INPGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDT----------------------------------- 315 (385)
Q Consensus 274 i~~G~SGGPlvn~~G~VVGI~s~~~~~~~---~~~~~g~aIP~~~----------------------------------- 315 (385)
+++|+|||||||.+|+||||+++.....+ ...+++|+||++.
T Consensus 160 ~~~G~SGGPl~~~~G~vvGI~s~~~~~~~~~~~~~~~~~aip~~~i~~~l~~l~~~g~~~~~~lGi~~~~~~~~~~~~~g 239 (318)
T 1te0_A 160 INHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQLATKIMDKLIRDGRVIRGYIGIGGREIAPLHAQGGG 239 (318)
T ss_dssp CCTTTTTSEEECTTCCEEEEEECCSSSSSSCCSCCSCEEEEEHHHHHHHHHHHHHHSSCCCEECCEEEEECSCCCSSSSC
T ss_pred CCCCCCcCceECCCCeEEEEEeeeeccCCccccccceEEeccHHHHHHHHHHHHHcCCcccccceeEeeecchhHHHhcc
Confidence 99999999999999999999998875432 3568999999875
Q ss_pred ----------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 ----------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ----------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.+.+++|++++|||+||+|++|||++|.++.++.+++...++|++++|+|+|+|+.+++++++.+.++
T Consensus 240 ~~~~~g~~V~~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 317 (318)
T 1te0_A 240 IDQLQGIVVNEVSPDGPAANAGIQVNDLIISVDNKPAISALETMDQVAEIRPGSVIPVVVMRDDKQLTLQVTIQEYPA 317 (318)
T ss_dssp SSSCCCEEEEEECTTSTTTTTCCCTTCCEEEETTEECCCHHHHHHHHHTSCTTCEEEEEEESSSCEEEEEEECEECCC
T ss_pred CCCCCcEEEEEeCCCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEEccCCC
Confidence 23356788899999999999999999999999999998878999999999999999999999988764
No 5
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=100.00 E-value=2e-43 Score=360.72 Aligned_cols=253 Identities=26% Similarity=0.404 Sum_probs=207.3
Q ss_pred HhCCceEEEEEeeeccCccccccccC-CCeEEEEEEEcCCCEEEecccccCCCCeEEEEec-CCCeEeeEEEEECCCCCe
Q 016647 124 ENTPSVVNITNLAARQDAFTLDVLEV-PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFA-DQSAYDAKIVGFDQDKDV 201 (385)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~-~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~-dg~~~~a~vv~~d~~~Dl 201 (385)
...+|||+|.+.....+++.+|.... ..+.||||||+ +||||||+|||+++..+.|.+. |++.++|++++.|+.+||
T Consensus 45 ~~~~sVV~I~~~~~~~~~~~Pw~~~~~~~s~GSGfiI~-dG~IlTN~HVV~~a~~i~V~~~~dg~~~~A~vv~~D~~~DL 123 (539)
T 4fln_A 45 SFLNAVVKVYCTHTAPDYSLPWQKQRQFTSTGSAFMIG-DGKLLTNAHCVEHDTQVKVKRRGDDRKYVAKVLVRGVDCDI 123 (539)
T ss_dssp HHHTTEEEEEEEECCBCSSSTTSBCCCEEEEEEEEEEE-TTEEEECGGGGTTEEEEEEECTTCCCCEEEEEEEEETTTTE
T ss_pred ccCCCeEEEEEEecCCCCCCccccCCccceEEEEEEEE-CCEEEEChHHcCCCCeEEEEEccCCEEEEEEEEEECCCCCE
Confidence 34689999999887777655554433 34789999998 6899999999999999999984 899999999999999999
Q ss_pred EEEEEcCCC--CCCcceecCCCCCCCCCCEEEEEeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCC
Q 016647 202 AVLRIDAPK--DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGN 278 (385)
Q Consensus 202 AlLkv~~~~--~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~ 278 (385)
||||++.+. ..++++.++ ..+++|++|+++|||++... +++.|+|+++.+.... .+.....+|++|+++++|+
T Consensus 124 AvLkv~~~~~~~~~~pl~~g--~~~~vGd~V~aiG~P~g~~~~tvT~GIVSa~~r~~~~--~~~~~~~~IQtDAaInpGn 199 (539)
T 4fln_A 124 ALLSVESEDFWKGAEPLRLG--HLPRLQDSVTVVGYPLGGDTISVTKGVVSRIEVTSYA--HGSSDLLGIQIDAAINPGN 199 (539)
T ss_dssp EEEEECCSSSSTTCCCCCBC--CCCCTTCEEEEEECCSSSCCCEEEEEEEEEEEEEECT--TSCCEEEEEEESSCCCTTT
T ss_pred EEEEEeCCcCCcCCceeecC--CcCcCCCeEEEEEcCCCCCCCcEEeEEECcccccccC--CCCcceeEEEEEeEecCCC
Confidence 999998653 234455665 34678999999999998765 8999999988776432 2233346799999999999
Q ss_pred CCceeeCCCccEEEEeecccCCCCCCCCceeeecccc-------------------------------------------
Q 016647 279 SGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT------------------------------------------- 315 (385)
Q Consensus 279 SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~------------------------------------------- 315 (385)
|||||||.+|+||||+++.+... +..++||+||++.
T Consensus 200 SGGPLvn~~GeVIGIntai~~~~-~~~gigfAIP~~~v~~vl~~l~~~G~~~~r~~LGv~~~~~~~~~~~~~~~l~~~~G 278 (539)
T 4fln_A 200 SGGPAFNDQGECIGVAFQVYRSE-ETENIGYVIPTTVVSHFLTDYERNGKYTGYPCLGVLLQKLENPALRECLKVPTNEG 278 (539)
T ss_dssp TTSEEECSSSCEEEEECCCC------CCCEEEEEHHHHHHHHHHHHTTTSCCCCCBCCEEEEECCCHHHHHHHTCSSSBC
T ss_pred ccchhccCCCcEEEEEEEEecCC-CCCcceecccHHHHHHHHHHHHHcCeEEeeeecceEEEecCCHHHHHhcCCCCcCc
Confidence 99999999999999999887543 3569999999986
Q ss_pred ----cccccccccccCCCCCcEEEEECCEEeCCHHH----------HHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecC
Q 016647 316 ----GLLSTKRDAYGRLILGDIITSVNGKKVSNGSD----------LYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPK 381 (385)
Q Consensus 316 ----~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~----------l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 381 (385)
.|.+++||+++ ||+||+|++|||++|.+..+ |..++..+++|++|+|+|+|+|++++++|++.++
T Consensus 279 v~V~~V~~~spA~~a-l~~GDvI~~idg~~V~~~g~~~~~~~~~~~l~~~v~~~~~Gd~v~l~v~R~Gk~~~v~Vtl~~~ 357 (539)
T 4fln_A 279 VLVRRVEPTSDASKV-LKEGDVIVSFDDLHVGCEGTVPFRSSERIAFRYLISQKFAGDIAEIGIIRAGEHKKVQVVLRPR 357 (539)
T ss_dssp EEEEEECTTSGGGGT-CCTTCEEEEETTEECBSSSEEECSTTCEEETHHHHHTSCTTCEEEEEEEETTEEEEEEEECBCC
T ss_pred eeeecccCCChHHhC-ccCCCEEEEECCEEeCcCCeeccccchhHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEccC
Confidence 22355666655 99999999999999987654 7788999999999999999999999999999887
Q ss_pred CC
Q 016647 382 PD 383 (385)
Q Consensus 382 ~~ 383 (385)
++
T Consensus 358 ~~ 359 (539)
T 4fln_A 358 VH 359 (539)
T ss_dssp CC
T ss_pred cc
Confidence 64
No 6
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=100.00 E-value=5.6e-44 Score=360.96 Aligned_cols=261 Identities=37% Similarity=0.571 Sum_probs=212.4
Q ss_pred hhHHHHHHHhCCceEEEEEeeecc-----------Cccccccc-----------cCCCeEEEEEEEcCC-CEEEeccccc
Q 016647 116 LATVRLFQENTPSVVNITNLAARQ-----------DAFTLDVL-----------EVPQGSGSGFVWDSK-GHVVTNYHVI 172 (385)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~-----------~~~~~~~~-----------~~~~~~GSGfiI~~~-G~ILT~aHvv 172 (385)
.++.++++++.||||.|.+..... ++|....+ ...++.||||||+++ ||||||+||+
T Consensus 19 ~~~~~~~~~~~pavv~i~~~~~~~~~~~~~~~~~~~~~~~~ff~~~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTn~HVv 98 (451)
T 3pv2_A 19 PSMAPVLKNIMPAIVNVAVQGYLPNDVTPPGSAGNDEENQPNNRPPQSRMPEKGRKFESIGSGVIIDPNNGVIITNDHVI 98 (451)
T ss_dssp CCSHHHHHHHGGGEEEEEEEEECCC-----------------------------CEEEEEEEEEEEETTTTEEEECHHHH
T ss_pred CCHHHHHHHhCCcEEEEEEEEeecccCCCccccccchhHHhhcccccccccccCcccceeEEEEEEECCCCEEEEChHHh
Confidence 356789999999999998875321 12111111 122478999999975 9999999999
Q ss_pred CCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCC-----CceEEeE
Q 016647 173 RGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGV 247 (385)
Q Consensus 173 ~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~-----~~~~~G~ 247 (385)
.+++.+.|.+.|++.++|++++.|+.+||||||++. ..++++.++++..+++|++|+++|||++.. .+++.|+
T Consensus 99 ~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~--~~l~~~~l~~s~~~~~G~~V~aiG~P~G~~~~~~~~~vt~Gi 176 (451)
T 3pv2_A 99 RNASLITVTLQDGRRLKARLIGGDSETDLAVLKIDA--KNLKSLVIGDSDKLEVGDFVVAIGNPFGLNSFGNSQSATFGI 176 (451)
T ss_dssp TTEEEEEEECTTSCEEECEEEEEETTTTEEEEECCC--SSCCCCCBCCGGGCCTTCEEEEEECCCCC-----CCEEEEEE
T ss_pred CCCCEEEEEEcCCCEEEEEEEecCcCCcEEEEEEcC--cCCceeEecCcccCCCCCEEEEEECCCCccccccCCceeEEE
Confidence 999999999999999999999999999999999975 468899998877899999999999999987 8999999
Q ss_pred EeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc------------
Q 016647 248 ISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT------------ 315 (385)
Q Consensus 248 Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~------------ 315 (385)
|+...+... .......++++|+.+++|+|||||||.+|+||||+++.+.+.+...++||+||++.
T Consensus 177 vs~~~r~~~---~~~~~~~~iqtda~i~~GnSGGPl~n~~G~VIGI~t~~~~~~~~~~g~gfaIP~~~~~~~~~~l~~~g 253 (451)
T 3pv2_A 177 VSALKRSDL---NIEGVENFIQTDAAINPGNSGGALVNAKGELIGINTAILSPYGGNVGIGFAIPINMVKDVAQQIIKFG 253 (451)
T ss_dssp EEEEC-------------CCEEESSCCCGGGTTSEEEETTCCEEEEEECCC------CCCEEEEEHHHHHHHHHHHHHHS
T ss_pred Eeecccccc---CCCCcceEEEEecccCCCCCcCcccCCCCeEEEEEeEeecCCCCccceeeeehhHHHHHHHHHHHhcC
Confidence 998866511 11233567999999999999999999999999999998887767789999999875
Q ss_pred ----------------------------------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEE
Q 016647 316 ----------------------------------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEV 361 (385)
Q Consensus 316 ----------------------------------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v 361 (385)
.+.++++++++|||+||+|++|||++|.++.++..++...++|+++
T Consensus 254 ~v~r~~lGv~~~~~~~~~a~~~gl~~~~~G~~V~~V~~~spA~~aGL~~GDvI~~vnG~~v~~~~~l~~~l~~~~~g~~v 333 (451)
T 3pv2_A 254 SIHRGLMGIFVQHLTPELAQAMGYPEDFQGALVSQVNPNSPAELAGLKAGDIITQINDTKITQATQVKTTISLLRVGSTV 333 (451)
T ss_dssp SCCCCBCCEEEEECCHHHHHHTTSCTTCCCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEE
T ss_pred CcccccccceEEeccHHHHHhcCCCcCCceEEEEecCCCChHHHcCCCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEE
Confidence 1235667888999999999999999999999999999988999999
Q ss_pred EEEEEECCEEEEEEEEeecC
Q 016647 362 IVEVLRGDQKEKIPVKLEPK 381 (385)
Q Consensus 362 ~l~v~R~g~~~~~~v~~~~~ 381 (385)
+|+|+|+|+.+++++++.+.
T Consensus 334 ~l~V~R~g~~~~~~v~l~~~ 353 (451)
T 3pv2_A 334 KIIVERDNKPLTLSAVVTDI 353 (451)
T ss_dssp EEEEEETTEEEEEEEECBCH
T ss_pred EEEEEECCEEEEEEEEEccC
Confidence 99999999999999988654
No 7
>1y8t_A Hypothetical protein RV0983; serine protease, structural genomics, PSI, protein structure initiative; 2.00A {Mycobacterium tuberculosis} SCOP: b.36.1.4 b.47.1.1 PDB: 2z9i_A
Probab=100.00 E-value=1.5e-42 Score=336.90 Aligned_cols=256 Identities=35% Similarity=0.556 Sum_probs=214.8
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCC---------eEEEEecCCC
Q 016647 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---------DIRVTFADQS 186 (385)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---------~i~V~~~dg~ 186 (385)
.++.++++++.||||+|..... ...+.||||+|+++||||||+||+.+.. .+.|.+.+++
T Consensus 6 ~~~~~~~~~~~~svV~I~~~~~-----------~~~~~gsG~iI~~~g~ILT~aHvv~~~~~~~~~~~~~~i~V~~~~g~ 74 (324)
T 1y8t_A 6 GSVEQVAAKVVPSVVMLETDLG-----------RQSEEGSGIILSAEGLILTNNHVIAAAAKPPLGSPPPKTTVTFSDGR 74 (324)
T ss_dssp CCHHHHHHHHGGGEEEEEEEC---------------CEEEEEECCTTSEEEEEHHHHTTCC--------CEEEEEETTCC
T ss_pred ccHHHHHHHhcCcEEEEEEEcc-----------CCCceEEEEEEeCCCEEEEChHHcCCcccccccCCceEEEEEeCCCC
Confidence 3567899999999999987432 1246899999998899999999998765 7999999999
Q ss_pred eEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCC-C--CC
Q 016647 187 AYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT-G--RP 263 (385)
Q Consensus 187 ~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~-~--~~ 263 (385)
.++++++.+|+.+||||||++.+ ..++++.|+++..++.|+.|+++|||++...+++.|+++...+....... + ..
T Consensus 75 ~~~a~vv~~d~~~DlAllkl~~~-~~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~G~vs~~~~~~~~~~~~g~~~~ 153 (324)
T 1y8t_A 75 TAPFTVVGADPTSDIAVVRVQGV-SGLTPISLGSSSDLRVGQPVLAIGSPLGLEGTVTTGIVSALNRPVSTTGEAGNQNT 153 (324)
T ss_dssp EECEEEEECCTTTTEEEEEECSC-CSCCCCEECCSTTCCTTCEEEEEECGGGCTTEEEEEEEEEEEEEECC-------CC
T ss_pred EEEEEEEEeCCCCCEEEEEECCC-CCCceEEecCcccCCCCCEEEEEEcCCCCCCcEeeeEEeecccccccccccCcccc
Confidence 99999999999999999999876 37889999877678999999999999988888899999987665432110 1 12
Q ss_pred cccEEEEccccCCCCCCceeeCCCccEEEEeecccCCC-------CCCCCceeeecccc---------------------
Q 016647 264 IQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPS-------GASSGVGFSIPVDT--------------------- 315 (385)
Q Consensus 264 ~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~-------~~~~~~g~aIP~~~--------------------- 315 (385)
...++++++.+++|+|||||+|.+|+||||+++..... +...+++|+||++.
T Consensus 154 ~~~~i~~d~~~~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~~~~~g~~~aIP~~~v~~~l~~l~~~g~~~~~~lGi 233 (324)
T 1y8t_A 154 VLDAIQTDAAINPGNSGGALVNMNAQLVGVNSAIATLGADSADAQSGSIGLGFAIPVDQAKRIADELISTGKASHASLGV 233 (324)
T ss_dssp CEEEEEECSCCCTTCTTEEEECTTSEEEEEEEEECCC-------CCCCSSCEEEEEHHHHHHHHHHHHHHSCCCCEECCE
T ss_pred cCCEEEEcCCCCCCCccCcEECCCCeEEEEEeeecccCcccccccccccceEEecCHHHHHHHHHHHHHcCCccccccce
Confidence 35689999999999999999999999999999876542 23468999999875
Q ss_pred --------------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEE-CCEEEEEEEEeec
Q 016647 316 --------------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLR-GDQKEKIPVKLEP 380 (385)
Q Consensus 316 --------------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R-~g~~~~~~v~~~~ 380 (385)
.+.++++++++|||+||+|++|||++|.++.++.+++...++|++++|+|+| +|+.+++++++.+
T Consensus 234 ~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~l~~~l~~~~~g~~v~l~v~R~~g~~~~~~v~~~~ 313 (324)
T 1y8t_A 234 QVTNDKDTLGAKIVEVVAGGAAANAGVPKGVVVTKVDDRPINSADALVAAVRSKAPGATVALTFQDPSGGSRTVQVTLGK 313 (324)
T ss_dssp EEESCSSSSSEEEEEECTTSTTTTTTCCTTCEEEEETTEECCSHHHHHHHHHTSCTTCEEEEEEECSSCCEEEEEEECEE
T ss_pred EeeeccCCCceEEEEECCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCCCEEEEEEEEcc
Confidence 2345678899999999999999999999999999999887899999999999 9999999999987
Q ss_pred CCC
Q 016647 381 KPD 383 (385)
Q Consensus 381 ~~~ 383 (385)
.++
T Consensus 314 ~~~ 316 (324)
T 1y8t_A 314 AEQ 316 (324)
T ss_dssp C--
T ss_pred CCC
Confidence 764
No 8
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=100.00 E-value=1.3e-42 Score=350.68 Aligned_cols=261 Identities=38% Similarity=0.593 Sum_probs=216.1
Q ss_pred hHHHHHHHhCCceEEEEEeeecc-----C------ccccccc--------------------------cCCCeEEEEEEE
Q 016647 117 ATVRLFQENTPSVVNITNLAARQ-----D------AFTLDVL--------------------------EVPQGSGSGFVW 159 (385)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~-----~------~~~~~~~--------------------------~~~~~~GSGfiI 159 (385)
++.++++++.||||.|.+..... . .|..... ....+.||||+|
T Consensus 14 ~~~~~~~~~~pavV~i~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GSG~ii 93 (448)
T 1ky9_A 14 SLAPMLEKVMPSVVSINVEGSTTVNTPRMPRNFQQFFGDDSPFCQEGSPFQSSPFCQGGQGGNGGGQQQKFMALGSGVII 93 (448)
T ss_dssp CSHHHHHHHGGGEEEEEEEEEEEECCCCSSCCTTCCCC---------------------------CEEEEEEEEEEEEEE
T ss_pred cHHHHHHHhCCcEEEEEEEEEecccCCccchhhhhhhccccccccccccccccccccccccccccccccccccEEEEEEE
Confidence 46789999999999998765421 0 1110000 011267999999
Q ss_pred cCC-CEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCC
Q 016647 160 DSK-GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (385)
Q Consensus 160 ~~~-G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g 238 (385)
+++ ||||||+||+.+++.+.|++.|++.++|++++.|+.+||||||++.+. .+++++|+++..+++|++|+++|||++
T Consensus 94 ~~~~g~IlTn~HVv~~a~~i~V~~~dg~~~~a~vv~~d~~~DlAvlkv~~~~-~~~~~~l~~s~~~~~G~~V~aiG~P~g 172 (448)
T 1ky9_A 94 DADKGYVVTNNHVVDNATVIKVQLSDGRKFDAKMVGKDPRSDIALIQIQNPK-NLTAIKMADSDALRVGDYTVAIGNPFG 172 (448)
T ss_dssp ETTTTEEEEEHHHHTTEEEEEEEETTSCEEEEEEEEEETTTTEEEEEESSCC-SCCCCCBCCGGGCCTTCEEEEEECTTS
T ss_pred ECCCCEEEEChHHhCCCCEEEEEECCCCEEEEEEEEEcCCCCEEEEEecCCC-CCceEEecccccCCCCCEEEEEECCCC
Confidence 987 999999999999999999999999999999999999999999998643 688999988778999999999999999
Q ss_pred CCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc---
Q 016647 239 LDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT--- 315 (385)
Q Consensus 239 ~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~--- 315 (385)
...+++.|+|+...+... .......++++|+.+++|+|||||||.+|+||||+++.+.+.++..++||+||++.
T Consensus 173 ~~~tvt~Givs~~~r~~~---~~~~~~~~iqtda~i~~GnSGGpl~n~~G~vvGI~~~~~~~~~~~~g~gfaIP~~~~~~ 249 (448)
T 1ky9_A 173 LGETVTSGIVSALGRSGL---NAENYENFIQTDAAINRGNAGGALVNLNGELIGINTAILAPDGGNIGIGFAIPSNMVKN 249 (448)
T ss_dssp SSCEEEEEEEEEESSCC--------CCCCEEESCCCTTSCCCSEEECTTSCEEEEEECSSTTSCCCSSSEEEEEHHHHHH
T ss_pred CCCeEEeEEEeecccccc---CCCCccCEEEEcCCCCCCCCCCeeECCCCEEEEEEEEeecCCCCccceeeeeecccchh
Confidence 989999999998866411 11224578999999999999999999999999999998876666789999999864
Q ss_pred ------------------------------------------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHh
Q 016647 316 ------------------------------------------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILD 353 (385)
Q Consensus 316 ------------------------------------------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~ 353 (385)
.+.++++++++||++||+|++|||++|.++.++..++.
T Consensus 250 ~~~~l~~~g~v~~~~LGv~~~~~~~~~a~~lgl~~~~G~~V~~V~~gspA~~AGL~~GDvI~~inG~~v~~~~~l~~~l~ 329 (448)
T 1ky9_A 250 LTSQMVEYGQVKRGELGIMGTELNSELAKAMKVDAQRGAFVSQVLPNSSAAKAGIKAGDVITSLNGKPISSFAALRAQVG 329 (448)
T ss_dssp HHHHHHHHSSCCBCCCCCSCCCTTSHHHHTSCCTTCCSEECCCCTTCSSSTTTTCCTTCEECBSSSSBCCSSHHHHHHTT
T ss_pred hHHHHhhhcccceeccccccccccHHHHHHhCCCCCCceEEEEeccCCHHHHcCCCCCCEEEEECCEEcCCHHHHHHHHH
Confidence 23356778889999999999999999999999999998
Q ss_pred cCCCCCEEEEEEEECCEEEEEEEEeecC
Q 016647 354 QCKVGDEVIVEVLRGDQKEKIPVKLEPK 381 (385)
Q Consensus 354 ~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 381 (385)
..++|++++|+|+|+|+.+++++++.+.
T Consensus 330 ~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 357 (448)
T 1ky9_A 330 TMPVGSKLTLGLLRDGKQVNVNLELQQS 357 (448)
T ss_dssp SSBTTCCCEEEEESSSCEEECCCC----
T ss_pred hcCCCCEEEEEEEECCEEEEEEEEEecC
Confidence 8889999999999999998888777543
No 9
>3num_A Serine protease HTRA1; DEGP, hydrolase; 2.75A {Homo sapiens} PDB: 3nzi_A 2ytw_A 2joa_A
Probab=100.00 E-value=1.6e-42 Score=337.69 Aligned_cols=257 Identities=34% Similarity=0.534 Sum_probs=149.2
Q ss_pred cchhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEE
Q 016647 114 DELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIV 193 (385)
Q Consensus 114 ~~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv 193 (385)
......++++++.+|||+|...... +|. ..+...+.||||||+++||||||+||+.+...+.|.+.+++.++++++
T Consensus 12 ~~~~~~~~~~~~~~sVV~I~~~~~~--~~~--~~~~~~~~GSG~iI~~~G~ILTaaHvv~~~~~i~V~~~~g~~~~a~~~ 87 (332)
T 3num_A 12 KYNFIADVVEKIAPAVVHIELFRKL--PFS--KREVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIK 87 (332)
T ss_dssp HHCHHHHHHHHHGGGEEEEEEEEEC--TTS--SCEEEEEEEEEEEEETTTEEEECTTTCCTTSEEEEEETTSCEEEEEEE
T ss_pred ccchHHHHHHHhcCcEEEEEEEecc--ccC--CCcceeeeEEEEEEeCCCEEEEChHHcCCCCEEEEEECCCCEEEEEEE
Confidence 3456678999999999999885431 121 112235789999999999999999999999999999999999999999
Q ss_pred EECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccc
Q 016647 194 GFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAA 273 (385)
Q Consensus 194 ~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~ 273 (385)
..|+.+||||||++.+. .++++.++++..+..|+.|+++|||++...+.+.|.++...+.............++++++.
T Consensus 88 ~~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~d~~ 166 (332)
T 3num_A 88 DVDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAI 166 (332)
T ss_dssp EEETTTTEEEEEECCSS-CCCCCCBCCTTSCCTTCEEEEECC-----CCEEEEEEEEC--------------CCEEESSC
T ss_pred EecCCCCeEEEEEcCCC-CCceeeecCcccCCCCCEEEEEECCCCCCcceeeeEEEeecccccccCcCCCcCCEEEEECC
Confidence 99999999999998764 68888998777899999999999999988899999998776543322222223467899999
Q ss_pred cCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc--------------------------------------
Q 016647 274 INPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT-------------------------------------- 315 (385)
Q Consensus 274 i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~-------------------------------------- 315 (385)
+++|+|||||||.+|+||||+++... .+++|+||++.
T Consensus 167 i~~G~SGGPlv~~~G~vvGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~g~~~~~r~~lGi~~~~~~~~~~~~ 241 (332)
T 3num_A 167 INYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDKIKKFLTESHDRQAKGKAITKKKYIGIRMMSLTSSKAKE 241 (332)
T ss_dssp CCTTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHHHHHCC----------------------------
T ss_pred cCCCCcHHHhhCCCCcEEEEEeeEec-----ccceEEECHHHHHHHHHHHhhhhccCcccccccccceEEEecCHHHhhh
Confidence 99999999999999999999998753 47899999653
Q ss_pred ------------------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEE
Q 016647 316 ------------------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVK 377 (385)
Q Consensus 316 ------------------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 377 (385)
.+.+++|++++||++||+|++|||++|.++.++.+++.. |++++|+|+|+|+.++++++
T Consensus 242 ~~~~~~~~~~~~~g~~V~~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~---~~~v~l~v~R~g~~~~~~v~ 318 (332)
T 3num_A 242 LKDRHRDFPDVISGAYIIEVIPDTPAEAGGLKENDVIISINGQSVVSANDVSDVIKR---ESTLNMVVRRGNEDIMITVI 318 (332)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhccccCCCCCceEEEEeccCCChHHcCCCCCCEEEEECCEECCCHHHHHHHHhC---CCeEEEEEEECCEEEEEEEE
Confidence 122355678899999999999999999999999988753 88999999999999999998
Q ss_pred eecCCC
Q 016647 378 LEPKPD 383 (385)
Q Consensus 378 ~~~~~~ 383 (385)
+....+
T Consensus 319 p~~~~~ 324 (332)
T 3num_A 319 PEEIDP 324 (332)
T ss_dssp ------
T ss_pred Eeeecc
Confidence 876543
No 10
>1lcy_A HTRA2 serine protease; apoptosis, PDZ domain, caspase activation, binding, hydrolase; 2.00A {Homo sapiens} SCOP: b.36.1.4 b.47.1.1
Probab=100.00 E-value=8.7e-42 Score=331.61 Aligned_cols=252 Identities=33% Similarity=0.543 Sum_probs=206.2
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEE
Q 016647 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (385)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (385)
..+.++++++.+|||+|..... ++|.. .....+.||||+|+++||||||+||+.+...+.|++.+|+.++++++.+
T Consensus 15 ~~~~~~~~~~~~sVV~I~~~~~--~~~~~--~~~~~~~gsG~iI~~~G~IlT~aHvv~~~~~i~V~~~~g~~~~a~v~~~ 90 (325)
T 1lcy_A 15 NFIADVVEKTAPAVVYIEILDR--HPFLG--REVPISNGSGFVVAADGLIVTNAHVVADRRRVRVRLLSGDTYEAVVTAV 90 (325)
T ss_dssp CHHHHHHHHHGGGEEEEEEEEE--ETTTT--EEEEEEEEEEEEEETTTEEEECHHHHTTCSEEEEECTTSCEEEEEEEEE
T ss_pred hHHHHHHHHhCCcEEEEEEEec--CccCC--CccccccEEEEEEeCCCEEEECHHHcCCCCEEEEEeCCCCEEEEEEEEE
Confidence 3467899999999999987543 12211 1112468999999999999999999999999999999999999999999
Q ss_pred CCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccC
Q 016647 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAIN 275 (385)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~ 275 (385)
|+.+||||||++.+. .+++++|+++..++.|++|+++|||.+...+++.|+|+...+.............++++|+.++
T Consensus 91 d~~~DlAllkl~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~v~~G~vs~~~~~~~~~g~~~~~~~~i~~d~~~~ 169 (325)
T 1lcy_A 91 DPVADIATLRIQTKE-PLPTLPLGRSADVRQGEFVVAMGSPFALQNTITSGIVSSAQRPARDLGLPQTNVEYIQTDAAID 169 (325)
T ss_dssp ETTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEECCCTTSSSSCCEEEEBCSCSCC---------CCCCEEESSCCS
T ss_pred CCCCCEEEEEEcCCC-CCceEEecccccCCCCCEEEEEECCCCCCCcEEeEEEecccccccccCCCCCCCCEEEEcCCCC
Confidence 999999999998753 6889999876678999999999999998889999999876653221111112346799999999
Q ss_pred CCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc----------------------------------------
Q 016647 276 PGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT---------------------------------------- 315 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~---------------------------------------- 315 (385)
+|+|||||||.+|+||||+++... .+++|+||++.
T Consensus 170 ~G~SGGPl~~~~G~vVGI~s~~~~-----~g~~~aip~~~i~~~l~~~~~~~~~~g~~~~~r~~lGv~~~~l~~~~~~~~ 244 (325)
T 1lcy_A 170 FGNAGGPLVNLDGEVIGVNTMKVT-----AGISFAIPSDRLREFLHRGEKKNSSSGISGSQRRYIGVMMLTLSPSILAEL 244 (325)
T ss_dssp TTTTTSEEEETTSCEEEEEEEEEE-----TTEEEEEEHHHHHHHTCC---------------EECCEEEEECCHHHHHHH
T ss_pred CCCccccEECCCCEEEEEEeEeec-----CCeeEEEEHHHHHHHHHHhhhcccccccccccccccceEeecCCHHHHHhh
Confidence 999999999999999999998753 36889988763
Q ss_pred -----------------cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 316 -----------------GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 316 -----------------~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
.+.++++++++|||+||+|++|||++|.++.++.+++.. |++++|+|+|+|+.+++++++
T Consensus 245 ~l~~~~~~~~~~gv~V~~V~~~spA~~aGl~~GDvI~~ing~~v~~~~~l~~~l~~---~~~v~l~v~R~g~~~~~~v~~ 321 (325)
T 1lcy_A 245 QLREPSFPDVQHGVLIHKVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT---QSQLAVQIRRGRETLTLYVTP 321 (325)
T ss_dssp TTSCTTSCCCSSCEEEEEECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHTT---CSSEEEEEEETTEEEEEEECC
T ss_pred CccccccccCCCCeEEEEeCcCChHHHCCCCCCCEEEEECCEEcCCHHHHHHHHhC---CCeEEEEEEECCEEEEEEEEE
Confidence 112345677889999999999999999999999999865 688999999999999999887
Q ss_pred ec
Q 016647 379 EP 380 (385)
Q Consensus 379 ~~ 380 (385)
..
T Consensus 322 ~~ 323 (325)
T 1lcy_A 322 EV 323 (325)
T ss_dssp EE
T ss_pred ec
Confidence 54
No 11
>3sti_A Protease DEGQ; serine protease, PDZ domain, chaperone, hydrolase; 2.60A {Escherichia coli}
Probab=100.00 E-value=1.2e-34 Score=270.18 Aligned_cols=195 Identities=41% Similarity=0.652 Sum_probs=148.2
Q ss_pred hHHHHHHHhCCceEEEEEeeeccC-----ccccccc---------cCCCeEEEEEEEcCC-CEEEecccccCCCCeEEEE
Q 016647 117 ATVRLFQENTPSVVNITNLAARQD-----AFTLDVL---------EVPQGSGSGFVWDSK-GHVVTNYHVIRGASDIRVT 181 (385)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~~-----~~~~~~~---------~~~~~~GSGfiI~~~-G~ILT~aHvv~~~~~i~V~ 181 (385)
++.++++++.||||.|.+...... ++..+.+ ....+.||||||+++ ||||||+||+.++..+.|.
T Consensus 14 ~~~~~~~~~~paVV~I~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~GSGfiI~~~~G~IlTnaHvv~~a~~i~V~ 93 (245)
T 3sti_A 14 SLAPMLEKVLPAVVSVRVEGTASQGQKIPEEFKKFFGDDLPDQPAQPFEGLGSGVIINASKGYVLTNNHVINQAQKISIQ 93 (245)
T ss_dssp BSHHHHHHHGGGEEEC----------------------------------CCEEEEEETTTTEEEECGGGC----CEEEE
T ss_pred CHHHHHHHhCCceEEEEEEEeeccccccchhhhhhccccccccccccccceEEEEEEeCCCCEEEEcHHHhCCCCEEEEE
Confidence 467899999999999988754331 1110111 112578999999998 9999999999999999999
Q ss_pred ecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCC
Q 016647 182 FADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATG 261 (385)
Q Consensus 182 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~ 261 (385)
+.|++.++++++..|+.+||||||++.+. .+++++|+++..+++|++|+++|||++...+++.|+|+...+... ..
T Consensus 94 ~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~~l~~s~~~~~G~~v~aiG~P~g~~~~vt~G~vs~~~~~~~---~~ 169 (245)
T 3sti_A 94 LNDGREFDAKLIGSDDQSDIALLQIQNPS-KLTQIAIADSDKLRVGDFAVAVGNPFGLGQTATSGIVSALGRSGL---NL 169 (245)
T ss_dssp CTTSCEEEEEEEEEETTTTEEEEEESSCC-SCCCCCBCCGGGCCTTBEEEEEECGGGSCCEEEEEEEEECSSCSS---CC
T ss_pred ECCCCEEEEEEEEecCCCCEEEEEeccCC-CCceeeecCcCCCCCCCEEEEEECCCCCCCcEEeeEEeeeccccc---CC
Confidence 99999999999999999999999997654 788999987777999999999999999999999999998765411 11
Q ss_pred CCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc
Q 016647 262 RPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (385)
Q Consensus 262 ~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~ 315 (385)
.....++++|+.+++|+|||||||.+|+||||+++.+.+.++..+++|+||++.
T Consensus 170 ~~~~~~i~tda~i~~G~SGGPLvn~~G~vVGI~s~~~~~~~~~~g~~faIP~~~ 223 (245)
T 3sti_A 170 EGLENFIQTDASINRGNSGGALLNLNGELIGINTAILAPGGGSVGIGFAIPSNM 223 (245)
T ss_dssp TTCSSCEEESSCCCTTTTTSEEECTTSCEEEEEECCC------CCCEEEEEHHH
T ss_pred CCccCEEEEcCCcCCCcchhHeecCCCeEEEEEEeEECCCCCcceEEEEEeHHH
Confidence 233567999999999999999999999999999998887667789999999976
No 12
>1l1j_A Heat shock protease HTRA; hydrolase, serine proteinase; 2.80A {Thermotoga maritima} SCOP: b.47.1.1
Probab=100.00 E-value=1.6e-33 Score=261.90 Aligned_cols=198 Identities=42% Similarity=0.694 Sum_probs=160.9
Q ss_pred hHHHHHHHhCCceEEEEEeeeccC--------ccccccc-------cCC-CeEEEEEEEcCCCEEEecccccCCCCeEEE
Q 016647 117 ATVRLFQENTPSVVNITNLAARQD--------AFTLDVL-------EVP-QGSGSGFVWDSKGHVVTNYHVIRGASDIRV 180 (385)
Q Consensus 117 ~~~~~~~~~~~SVV~I~~~~~~~~--------~~~~~~~-------~~~-~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V 180 (385)
++.++++++.||||.|.+...... +|..+.+ ... .+.||||||+++||||||+||+.++..++|
T Consensus 5 ~~~~~~~~~~psVV~I~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsG~iI~~~g~ILTnaHvv~~~~~i~V 84 (239)
T 1l1j_A 5 PIVNVVEACAPAVVKIDVVKTVKTSFFDPYFEQFFKKWFGELPPGFERQVASLGSGFIFDPEGYILTNYHVVGGADNITV 84 (239)
T ss_dssp HHHHHHHHHGGGEEEEEEECC--CCCCCHHHHHHHHHHCTTSCTTHHHHEEEEEEEEEEETTTEEEEEHHHHSSCSSCEE
T ss_pred hHHHHHHHhCCCEEEEEEEEeecccccccccchhhhhhccccccccccccCceEEEEEEeCCCEEEEChHHhCCCCEEEE
Confidence 467899999999999998654321 1111111 112 568999999988999999999999999999
Q ss_pred EecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCC
Q 016647 181 TFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT 260 (385)
Q Consensus 181 ~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~ 260 (385)
.+.|++.++++++.+|+.+||||||++.+...+++++|+++..+++|++|+++|||.+...+++.|+|+...+.......
T Consensus 85 ~~~~g~~~~a~vv~~d~~~DlAllkl~~~~~~~~~~~l~~s~~~~~G~~v~~iG~p~g~~~~vt~Givs~~~r~~~~~~~ 164 (239)
T 1l1j_A 85 TMLDGSKYDAEYIGGDEELDIAVIKIKASDKKFPYLEFGDSDKVKIGEWAIAIGNPLGFQHTVTVGVVSATNRRIPKPDG 164 (239)
T ss_dssp ECTTSCEEEBCCCEEETTTTEEEEEBCCSSSCCCCCEECCGGGCCTTCEEEEEECTTSSSCEEEEEEEEEEEEEEECTTS
T ss_pred EECCCCEEEEEEEEEcCCCCEEEEEEcCCCCCCceEEecCccCCccccEEEEEECCCCCCCcEEEEEEeccccccccCCC
Confidence 99999999999999999999999999875336889999877678999999999999998888999999988765432111
Q ss_pred CCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc
Q 016647 261 GRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (385)
Q Consensus 261 ~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~ 315 (385)
......++++|+.+++|+|||||+|.+|+||||+++... ++...+++|+||++.
T Consensus 165 ~~~~~~~i~tda~i~~G~SGGPLv~~~G~vvGI~s~~~~-~~~~~g~~faIP~~~ 218 (239)
T 1l1j_A 165 SGYYVGLIQTDAAINPGNSGGPLLNIHGEVIGINTAIVN-PQEAVNLGFAIPINT 218 (239)
T ss_dssp SCEEEEEEEESSCCCTTTTTSEEECSSSEEEEEECCCSC-CCSCCSCEEEEEHHH
T ss_pred ccccCCEEEECCCCCCCCccHHhccCCCeEEEEEeeeec-CCCcCceEEEEEHHH
Confidence 112346899999999999999999999999999998876 444568999999976
No 13
>3lgi_A Protease DEGS; stress-sensor, HTRA, PDZ OMP, hydrolase, serine PR; 1.65A {Escherichia coli} PDB: 2qf3_A 2qf0_A 2rce_A* 3lh3_A* 3b8j_A 2qgr_A 3lh1_A 3lgy_A 3lgu_A 3lgv_A 3lgw_A 3lgt_A 2r3u_A
Probab=100.00 E-value=1.2e-32 Score=255.70 Aligned_cols=194 Identities=38% Similarity=0.562 Sum_probs=162.2
Q ss_pred chhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEE
Q 016647 115 ELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVG 194 (385)
Q Consensus 115 ~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~ 194 (385)
..++.++++++.+|||+|........+ .......+.||||||+++||||||+||+.+...+.|.+.+++.++++++.
T Consensus 19 ~~~~~~~~~~~~~sVV~I~~~~~~~~~---~~~~~~~~~GsG~ii~~~G~IlTaaHvv~~~~~~~V~~~~g~~~~a~vv~ 95 (237)
T 3lgi_A 19 PASYNLAVRRAAPAVVNVYNRGLNTNS---HNQLEIRTLGSGVIMDQRGYIITNKHVINDADQIIVALQDGRVFEALLVG 95 (237)
T ss_dssp CCBCHHHHHHHGGGEEEEEEECCTTTC---TTSCCEEEEEEEEEEETTTEEEEEHHHHTTCSEEEEECTTSCEEEEEEEE
T ss_pred CcCHHHHHHHhCCcEEEEEEEecccCc---ccccccceEEEEEEEeCCCEEEEeeeecCCCCEEEEEeCCCCEEEEEEEE
Confidence 345678999999999999987654322 11112346899999999999999999999999999999999999999999
Q ss_pred ECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccc
Q 016647 195 FDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAI 274 (385)
Q Consensus 195 ~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i 274 (385)
.|+.+||||||++.+. .+++++|+++..+..|+.|+++|||++.....+.|.|+...+..... .....++++|+.+
T Consensus 96 ~d~~~DlAll~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~~~~~~~~~g~vs~~~~~~~~~---~~~~~~i~~d~~i 171 (237)
T 3lgi_A 96 SDSLTDLAVLKINATG-GLPTIPINARRVPHIGDVVLAIGNPYNLGQTITQGIISATGRIGLNP---TGRQNFLQTDASI 171 (237)
T ss_dssp EETTTTEEEEECCCSS-CCCCCCCCTTCCCCTTBEEEEEECGGGSCSEEEEEEEEEECCSSCCT---TSCSCCEEECSCC
T ss_pred EcCCCCEEEEEecCCC-CCceEeccCcccCCCCCEEEEEECCCCCCCcEEEEEEEecccccccC---CCcCCEEEEcCcc
Confidence 9999999999998754 58889998777789999999999999988899999999776543221 2335678999999
Q ss_pred CCCCCCceeeCCCccEEEEeecccCCCC---CCCCceeeecccc
Q 016647 275 NPGNSGGPLLDSSGSLIGINTAIYSPSG---ASSGVGFSIPVDT 315 (385)
Q Consensus 275 ~~G~SGGPlvn~~G~VVGI~s~~~~~~~---~~~~~g~aIP~~~ 315 (385)
++|+|||||||.+|+||||+++.+.... ...+++|+||++.
T Consensus 172 ~~G~SGGPlv~~~G~vvGI~s~~~~~~~~~~~~~g~~~aip~~~ 215 (237)
T 3lgi_A 172 NHGNSGGALVNSLGELMGINTLSFDKSNDGETPEGIGFAIPFQL 215 (237)
T ss_dssp CTTCTTCEEECTTCCEEEEECCCCCCCTTSCCCCSCEEEEEHHH
T ss_pred CCCCchHHeeCCCCeEEEEEeeeeccCCCCcCcCceEEEEEHHH
Confidence 9999999999999999999999876533 3568999999876
No 14
>3tjo_A Serine protease HTRA1; peptidase, hydrolase; HET: BOG; 2.30A {Homo sapiens} PDB: 3tjn_A 3nwu_A
Probab=100.00 E-value=1.9e-32 Score=253.43 Aligned_cols=191 Identities=38% Similarity=0.603 Sum_probs=153.5
Q ss_pred chhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEE
Q 016647 115 ELATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVG 194 (385)
Q Consensus 115 ~~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~ 194 (385)
.....++++++.+|||+|...... +|.. .....+.||||||+++||||||+||+.+...+.|.+.+++.++++++.
T Consensus 30 ~~~~~~~~~~~~~sVV~I~~~~~~--~~~~--~~~~~~~GSG~iI~~~G~VLTaaHvv~~~~~i~V~~~~g~~~~a~v~~ 105 (231)
T 3tjo_A 30 YNFIADVVEKIAPAVVHIELFRKL--PFSK--REVPVASGSGFIVSEDGLIVTNAHVVTNKHRVKVELKNGATYEAKIKD 105 (231)
T ss_dssp SCHHHHHHHHHGGGEEEEEEEEEC--TTSS--CEEEEEEEEEEECSTTCEEEEETTTCCSSSEEEEECTTSCEEEEEEEE
T ss_pred hhHHHHHHHHhcCcEEEEEEEecc--ccCC--CccccceEEEEEEeCCCEEEEchhcccCCceEEEEcCCCCEEEEEEEE
Confidence 355678999999999999886542 2211 112236899999999999999999999999999999999999999999
Q ss_pred ECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEcccc
Q 016647 195 FDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAI 274 (385)
Q Consensus 195 ~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i 274 (385)
.|+.+||||||++.+. .++++.|+++..++.|+.|+++|||++.....+.|.++...+.............++++++.+
T Consensus 106 ~d~~~DlAlL~l~~~~-~~~~~~l~~~~~~~~G~~v~~~G~p~g~~~~~~~g~vs~~~~~~~~~~~~~~~~~~i~~da~i 184 (231)
T 3tjo_A 106 VDEKADIALIKIDHQG-KLPVLLLGRSSELRPGEFVVAIGSPFSLQNTVTTGIVSTTQRGGKELGLRNSDMDYIQTDAII 184 (231)
T ss_dssp EETTTTEEEEECCCSS-CCCCCCBCCGGGCCTTCEEEEEEEEETTEEEEEEEEEEECC-------------CCEEESSCC
T ss_pred ecCCCCEEEEEecCCC-CCCceecCCcCCCCCCCEEEEEECCCCCCCceeeEEEeeccccccccccCCCcccEEEEcCCc
Confidence 9999999999998654 688889977777899999999999998888889999987765433222222234678999999
Q ss_pred CCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc
Q 016647 275 NPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (385)
Q Consensus 275 ~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~ 315 (385)
++|+|||||||.+|+||||+++... .+++|+||++.
T Consensus 185 ~~G~SGGPLv~~~G~vVGI~s~~~~-----~g~~~aip~~~ 220 (231)
T 3tjo_A 185 NYGNAGGPLVNLDGEVIGINTLKVT-----AGISFAIPSDK 220 (231)
T ss_dssp CTTTTTSEEECTTSCEEEEEEEEEE-----TTEEEEEEHHH
T ss_pred CCCCchhHeecCCCeEEEEEeEEec-----CCeEEEEEHHH
Confidence 9999999999999999999998753 47999999865
No 15
>3k6y_A Serine protease, possible membrane-associated serine protease; oxidative stress, disulfide, BENT helix, HY protease; 1.30A {Mycobacterium tuberculosis} PDB: 3k6z_A 3lt3_A
Probab=99.97 E-value=5.5e-29 Score=230.88 Aligned_cols=183 Identities=28% Similarity=0.442 Sum_probs=149.4
Q ss_pred hhHHHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEE
Q 016647 116 LATVRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGF 195 (385)
Q Consensus 116 ~~~~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~ 195 (385)
....++++++.+|||+|......+. ..+.||||+|+ +||||||+||+.+...+.|.+.++ .++++++.+
T Consensus 31 ~~~~~~~~~~~~svV~I~~~~~~~~---------~~~~GsG~iI~-~~~VlTaaH~v~~~~~~~V~~~~~-~~~~~~v~~ 99 (237)
T 3k6y_A 31 LVNNPVVAATEPSVVKIRSLAPRCQ---------KVLEGTGFVIS-PDRVMTNAHVVAGSNNVTVYAGDK-PFEATVVSY 99 (237)
T ss_dssp GGGCHHHHHHGGGEEEEEEEEGGGT---------EEEEEEEEEEE-TTEEEECGGGTTTCSEEEEEETTE-EEECEEEEE
T ss_pred cccHHHHHHhcCCEEEEEEEecCCC---------cceeEEEEEEE-CCEEEECHHHcCCCceEEEEECCc-EEEEEEEEE
Confidence 3345789999999999988653221 24689999999 679999999999999999999884 899999999
Q ss_pred CCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCC--CC-CcccEEEEcc
Q 016647 196 DQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAAT--GR-PIQDVIQTDA 272 (385)
Q Consensus 196 d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~--~~-~~~~~i~~d~ 272 (385)
|+.+||||||++. ..+++++|+ +..+..|+.++++|||++.......|.++...+....... .. ....++++++
T Consensus 100 ~~~~DiAll~l~~--~~~~~~~l~-~~~~~~G~~v~v~G~p~g~~~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (237)
T 3k6y_A 100 DPSVDVAILAVPH--LPPPPLVFA-AEPAKTGADVVVLGYPGGGNFTATPARIREAIRLSGPDIYGDPEPVTRDVYTIRA 176 (237)
T ss_dssp ETTTTEEEEECTT--CCSCCCCBC-SSCCCTTCEEEEEECGGGCSCEEEEEEEEEEEEEEECCTTCCSSCEEEEEEEEES
T ss_pred cCCCCEEEEEeCC--CCCCceecC-CCCCCCCCEEEEEECCCCCCCccceeEEEeeEeecccccccCCCcccccEEEecC
Confidence 9999999999985 468889997 5678999999999999988888888888766544332211 11 2345788999
Q ss_pred ccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc
Q 016647 273 AINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (385)
Q Consensus 273 ~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~ 315 (385)
.+++|+|||||+|.+|+||||+++.... ..+++|+||++.
T Consensus 177 ~~~~GdSGGPLv~~~G~vvGI~s~~~~~---~~~~~~aip~~~ 216 (237)
T 3k6y_A 177 DVEQGDSGGPLIDLNGQVLGVVFGAAID---DAETGFVLTAGE 216 (237)
T ss_dssp CCCTTCTTCEEECTTSCEEEEEEEECSS---STTEEEEEEHHH
T ss_pred ccCCCccHHHEECCCCEEEEEEEeeccC---CCcEEEEEEHHH
Confidence 9999999999999999999999987542 347899999986
No 16
>2w5e_A Putative serine protease; coiled coil, transmembrane, thiol protease, RNA replication, ribosomal frameshifting, catalytic triad, membrane; 2.00A {Human astrovirus 1}
Probab=99.91 E-value=2.1e-23 Score=182.25 Aligned_cols=138 Identities=21% Similarity=0.324 Sum_probs=105.4
Q ss_pred CCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCE
Q 016647 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQK 229 (385)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~ 229 (385)
..+.||||+| +|+||||+||++++..++|++ |++.++++++ .|+..||||||++.....+.+++++++.. .+.
T Consensus 19 ~~~~GSGfii--~g~IlTn~HVV~~~~~i~V~~-dg~~~~a~vv-~d~~~DlAlLkv~~~~~~~~~l~l~~~~~---~~~ 91 (163)
T 2w5e_A 19 PEGKGTGFFS--GNDIVTAAHVVGNNTFVNVCY-EGLMYEAKVR-YMPEKDIAFITCPGDLHPTARLKLSKNPD---YSC 91 (163)
T ss_dssp TTEEEEEEEE--TTEEEEEHHHHTTCSEEEEEE-TTEEEEEEEE-ECCSSSEEEEECCTTCCCSCCCCBCSSCC---TTE
T ss_pred CceeEEEEEE--CCEEEecHHHhCCCceEEEEE-CCEEEEEEEE-EECCCCEEEEEecCCCCCcceEEcCCCCC---CCE
Confidence 4678999999 589999999999999999999 9999999999 99999999999987543455566765432 389
Q ss_pred EEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCcee
Q 016647 230 VYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGF 309 (385)
Q Consensus 230 V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~ 309 (385)
|+++|+|.+. . .++...... ....+.+++.+++|+|||||||.+|+||||++.... ..+ ||
T Consensus 92 v~~~G~p~~~---~---~~s~~~~~~--------~g~~~~~~a~i~pGnSGGPl~n~~G~VVGI~~~~~g----~~g-g~ 152 (163)
T 2w5e_A 92 VTVMAYVNED---L---VVSTAAAMV--------YGNTLSYAVRTQDGMSGAPVCDKYCRVLAVHQTNTG----YTG-GA 152 (163)
T ss_dssp EEEEEEETTE---E---EEEEEEEEE--------ETTEEEEECSCSSCCTTCEEECTTSCEEEEEEEEET----TEE-EE
T ss_pred EEEEEeCCCC---E---EEEEeccEE--------cCCeEEEEEEeCCCCchhhEEcCCCEEEEEEccCcc----ccc-CE
Confidence 9999999652 1 111111111 123467789999999999999999999999986532 334 77
Q ss_pred eecc
Q 016647 310 SIPV 313 (385)
Q Consensus 310 aIP~ 313 (385)
+|..
T Consensus 153 ai~~ 156 (163)
T 2w5e_A 153 VIID 156 (163)
T ss_dssp EECC
T ss_pred EEec
Confidence 7754
No 17
>2as9_A Serine protease; trypsin-like fold, hydrolase; 1.70A {Staphylococcus aureus}
Probab=99.87 E-value=2e-21 Score=176.61 Aligned_cols=168 Identities=25% Similarity=0.421 Sum_probs=122.0
Q ss_pred CceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCC---eEEEEe----cCCCeEeeE-EEEECCC
Q 016647 127 PSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYDAK-IVGFDQD 198 (385)
Q Consensus 127 ~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~----~dg~~~~a~-vv~~d~~ 198 (385)
+++|+|.. ...-||.... ....|+||+|++ +||||||||+.+.. .+.|.+ .+++.+.++ ++.+|+.
T Consensus 3 ~~~~~i~~--~~~~P~~v~~---~~~~c~G~lI~~-~~VLTaaHcv~~~~~~~~i~v~~~~~~~~g~~~~~~~v~~~~~~ 76 (210)
T 2as9_A 3 KNVTQVKD--TNNFPYNGVV---SFKDATGFVIGK-NTIITNKHVSKDYKVGDRITAHPNGDKGNGGIYKIKSISDYPGD 76 (210)
T ss_dssp CCEEECSC--TTSTTGGGEE---ECSSCEEEEEET-TEEEECHHHHHHCCTTCEEEESCCGGGCCSCEEEEEEEEECSSS
T ss_pred CceEEeec--CCcCCeEEEE---EeeeEEEEEEeC-CEEEECHhHCCccCCCCEEEEEeCcccCCCCEEEEEEEEeCCCC
Confidence 46677744 2333454322 135799999997 59999999997644 566654 467788884 7788899
Q ss_pred CCeEEEEEcCCC-----------CCCcceecCCCCCCCCCCEEEEEeCCCCCCCc----eEEeEEeeeeeeeccCCCCCC
Q 016647 199 KDVAVLRIDAPK-----------DKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGRP 263 (385)
Q Consensus 199 ~DlAlLkv~~~~-----------~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~----~~~G~Vs~~~~~~~~~~~~~~ 263 (385)
+||||||++.+. +.++++.+. ..+..|+.++++|||.+.... +..|+++...
T Consensus 77 ~DiAll~l~~~~~~~~~~~~~~~~~v~~i~l~--~~~~~g~~v~v~G~p~~~~~~~~l~~~~g~v~~~~----------- 143 (210)
T 2as9_A 77 EDISVMNIEEQAVERGPKGFNFNENVQAFNFA--KDAKVDDKIKVIGYPLPAQNSFKQFESTGTIKRIK----------- 143 (210)
T ss_dssp SSCEEEEECSEEEEEETTEEEGGGSCCCCCBC--SCCCTTCEEEEEECSSTTTTTSCCEEEEEEEEEEE-----------
T ss_pred CcEEEEEecCccccccccccccccccceeecC--CCCCCCCEEEEEeCCCCCCCCcceEEeeeEEcccc-----------
Confidence 999999998631 135677774 357899999999999765433 3566666431
Q ss_pred cccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCCCceeeecccc
Q 016647 264 IQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (385)
Q Consensus 264 ~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~ 315 (385)
...+++++.+++|+|||||+|.+|+||||++++..+.+ ....+|++|.+.
T Consensus 144 -~~~i~~~~~~~~GdSGGPlv~~~g~lvGI~s~g~~~~~-~~~~~~~~~~~~ 193 (210)
T 2as9_A 144 -DNILNFDAYIEPGNSGSPVLNSNNEVIGVVYGGIGKIG-SEYNGAVYFTPQ 193 (210)
T ss_dssp -TTEEEEECCCCTTCTTCEEECTTSCEEEEECCSCCCTT-CSSEEEEECCHH
T ss_pred -CCeEEEcCccCCCCccCcEECCCCeEEEEEecccccCC-ccccccEEEcHH
Confidence 24578899999999999999989999999999876543 345678887643
No 18
>1agj_A Epidermolytic toxin A; hydrolase, serine protease; 1.70A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dua_A 1exf_A 1due_A
Probab=99.85 E-value=8.7e-21 Score=175.91 Aligned_cols=152 Identities=26% Similarity=0.443 Sum_probs=110.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCe--EEEEecCC-------------CeEeeEEEEECC---CCCeEEEEEcCCCC-
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASD--IRVTFADQ-------------SAYDAKIVGFDQ---DKDVAVLRIDAPKD- 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~--i~V~~~dg-------------~~~~a~vv~~d~---~~DlAlLkv~~~~~- 211 (385)
...|+||+|++ +||||||||+.+... +.|.+.+| ..+.++.+..|+ .+||||||++.+..
T Consensus 54 ~~~c~G~lI~~-~~VLTAaHcv~~~~~~~~~v~~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~DiAll~l~~~~~~ 132 (242)
T 1agj_A 54 QTSATGVLIGK-NTVLTNRHIAKFANGDPSKVSFRPSINTDDNGNTETPYGEYEVKEILQEPFGAGVDLALIRLKPDQNG 132 (242)
T ss_dssp TEEEEEEECSS-SEEEECHHHHGGGTTCGGGEEEEETCEECTTSCEECTTCCEEEEEEESCTTCTTSCCEEEEECCCTTS
T ss_pred CccEEEEEEeC-CEEEEChhhcccCCCCceEEEEecCccccccccccccCCceeEEEEEeCCCCCCCcEEEEEEcCCCcc
Confidence 35899999986 599999999976543 45555333 247788888887 88999999987641
Q ss_pred -----CCcceecCCCCCCCCCCEEEEEeCCCCCCCc-eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeC
Q 016647 212 -----KLRPIPIGVSADLLVGQKVYAIGNPFGLDHT-LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (385)
Q Consensus 212 -----~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~-~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn 285 (385)
.++++.|++...+..|+.++++|||.+.... .....+... . ....+++++.+|+|+|||||++
T Consensus 133 ~~~~~~v~~i~L~~~~~~~~g~~~~v~Gwg~~~~~~~l~~~~~~~~-----~------~~~~~~~~~~~c~GdSGGPl~~ 201 (242)
T 1agj_A 133 VSLGDKISPAKIGTSNDLKDGDKLELIGYPFDHKVNQMHRSEIELT-----T------LSRGLRYYGFTVPGNSGSGIFN 201 (242)
T ss_dssp CCHHHHSCCCEECCSTTCCTTCEEEEEECCTTTSTTCCEEEEEEEC-----C------GGGSEEEECCCCGGGTTCEEEC
T ss_pred ccccccccceecCccccCCCCCEEEEEeCCCCCCCccceeeeeeEe-----c------CCceEEEeCCcCCCCCchHhcc
Confidence 3788899765567899999999999775432 222222111 0 1123677889999999999999
Q ss_pred CCccEEEEeecccCCCCCCCCceeeeccc
Q 016647 286 SSGSLIGINTAIYSPSGASSGVGFSIPVD 314 (385)
Q Consensus 286 ~~G~VVGI~s~~~~~~~~~~~~g~aIP~~ 314 (385)
.+|+||||++++..-.....+.+|++|++
T Consensus 202 ~~g~lvGI~s~g~~c~~~~~~~~~~~~i~ 230 (242)
T 1agj_A 202 SNGELVGIHSSKVSHLDREHQINYGVGIG 230 (242)
T ss_dssp TTSEEEEEEEEEEECSSTTCEEEEEEECC
T ss_pred cCCEEEEEEeccccccCcCCCceeeEEeh
Confidence 89999999998754222234677777764
No 19
>2h5c_A Alpha-lytic protease; serine protease, acylation transition STAT catalysis, protein folding, protein stability, packing DIST hydrolase; HET: SO4; 0.82A {Lysobacter enzymogenes} SCOP: b.47.1.1 PDB: 1p02_A 1p03_A 1p04_A 1p05_A 1p06_A* 1p01_A 1p11_E 1p12_E 1qrx_A* 1tal_A 2alp_A 1ssx_A* 2h5d_A* 2ull_A 3qgj_A* 9lpr_A 1boq_A 1gbj_A 1gbk_A 1gbl_A ...
Probab=99.80 E-value=5.5e-19 Score=159.20 Aligned_cols=153 Identities=20% Similarity=0.230 Sum_probs=117.7
Q ss_pred EEEEEEEcCC--CEEEecccccCCCCeEEEEecCCCeEeeEEEEEC-CCCCeEEEEEcCCCCCCcce-------ecCCCC
Q 016647 153 SGSGFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRPI-------PIGVSA 222 (385)
Q Consensus 153 ~GSGfiI~~~--G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~l-------~l~~~~ 222 (385)
--+||++.++ ++||||+||+++...+. .| ..+.++++..| +..|+||||++.+....+.+ .+....
T Consensus 17 CT~Gf~v~~~~~~~ilTa~Hc~~~~~~v~---~~-~~~~g~vv~~~~~~~D~Avi~i~~~~~~~~~v~~~g~~~~v~g~~ 92 (198)
T 2h5c_A 17 CSVGFSVTRGATKGFVTAGHCGTVNATAR---IG-GAVVGTFAARVFPGNDRAWVSLTSAQTLLPRVANGSSFVTVRGST 92 (198)
T ss_dssp EECCEEEEETTEEEEEECGGGCCTTCEEE---ET-TEEEEEEEEEECSBSCEEEEEECTTSEEEEEEEETTEEEECCBCC
T ss_pred CCcCEEEecCCeeEEEECcccCCCCCEEE---eC-CcEEEEEEecCCCCCCEEEEEeCCCCccCceEecCCceEEecCcc
Confidence 4569999653 68999999999887765 45 47889999999 99999999998743112222 344566
Q ss_pred CCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeeccc-CCC
Q 016647 223 DLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY-SPS 301 (385)
Q Consensus 223 ~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~-~~~ 301 (385)
.+++|+.|+.+|+|.+ .+.|+|+.+.+..... . .....+++++.++.+|+|||||+|.+|++|||+++.. ...
T Consensus 93 ~~~vG~~V~~~G~~tg----~t~G~V~~~~~~~~~~-~-g~~~~~i~t~~~~~~GDSGGPl~~~~g~~vGI~s~~~~~~~ 166 (198)
T 2h5c_A 93 EAAVGAAVCRSGRTTG----YQCGTITAKNVTANYA-E-GAVRGLTQGNACMGRGDSGGSWITSAGQAQGVMSGGNVQSN 166 (198)
T ss_dssp CCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEECSCCBTTCTTCEEECTTCBEEEEEEEECCCTT
T ss_pred cCCCCCeEEEeecCcc----eEEEEEEeeeeEEEeC-C-CeEeeeEEecccCCCCcceeEEEeeCCEEEEEEEeecCccC
Confidence 7899999999999876 6899999888754421 1 1245689999999999999999998999999999873 321
Q ss_pred -C-----CCCCceeeecccc
Q 016647 302 -G-----ASSGVGFSIPVDT 315 (385)
Q Consensus 302 -~-----~~~~~g~aIP~~~ 315 (385)
+ ...+++|++|++.
T Consensus 167 ~~~c~~~~~~g~~f~~Pi~~ 186 (198)
T 2h5c_A 167 GNNCGIPASQRSSLFERLQP 186 (198)
T ss_dssp SBSTTSCGGGCCEEEEEHHH
T ss_pred CCccccccCCceEEEEEHHH
Confidence 1 2347899999975
No 20
>2w7s_A Serine protease SPLA; hydrolase, family S1; 1.80A {Staphylococcus aureus} PDB: 2w7u_A
Probab=99.80 E-value=1.3e-19 Score=163.09 Aligned_cols=133 Identities=27% Similarity=0.435 Sum_probs=100.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCe----EEEEe----cCCCeEee-EEEEECCCCCeEEEEEcCCC-------CCCcc
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASD----IRVTF----ADQSAYDA-KIVGFDQDKDVAVLRIDAPK-------DKLRP 215 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~----i~V~~----~dg~~~~a-~vv~~d~~~DlAlLkv~~~~-------~~~~~ 215 (385)
..|+||+|++ +||||||||+.+... +.+.. .+++.+.+ +++.+|+.+||||||++.+. +.+++
T Consensus 22 ~~c~G~lI~~-~~VLTaaHcv~~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~v~p 100 (200)
T 2w7s_A 22 VGGTGVVVGK-NTIVTNKHIAKSNDIFKNRVSAHHSSKGKGGGNYDVKDIVEYPGKEDLAIVHVHETSTEGLNFNKNVSY 100 (200)
T ss_dssp TTEEEEEEET-TEEEECHHHHHHHHHTTCCEEETCCSSSCCCCEECEEEEEECSSSSSCEEEEECSBCTTSCBGGGSCCC
T ss_pred ceEEEEEEEC-CEEEEChhhcCCcccCCcEEEEEecCccCCCcEEEEEEEecCCCcceEEEEEECCCCCCcccccccccc
Confidence 4699999996 599999999975433 55543 45677877 47788889999999998741 14566
Q ss_pred eecCCCCCCCCCCEEEEEeCCCCCCCc----eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEE
Q 016647 216 IPIGVSADLLVGQKVYAIGNPFGLDHT----LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLI 291 (385)
Q Consensus 216 l~l~~~~~~~~G~~V~~iG~p~g~~~~----~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VV 291 (385)
+.|. ..+..|+.++++|||++.... ...|.++... ...+++++.+++|+|||||+|.+|+||
T Consensus 101 i~l~--~~~~~g~~v~v~G~p~g~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g~lv 166 (200)
T 2w7s_A 101 TKFA--DGAKVKDRISVIGYPKGAQTKYKMFESTGTINHIS------------GTFMEFDAYAQPGNSGSPVLNSKHELI 166 (200)
T ss_dssp CCBC--CCCCTTCEEEEEECTTHHHHTSCEEEEEEEEEEEE------------TTEEEECSCCCTTCTTCEEECTTSCEE
T ss_pred eecc--ccCCCCCEEEEEECCCCCCCccceEEeEEEEEccC------------CCEEEEcceeCCCCccCeEECcCCEEE
Confidence 7774 357889999999999764322 3556665421 245778889999999999999899999
Q ss_pred EEeecccC
Q 016647 292 GINTAIYS 299 (385)
Q Consensus 292 GI~s~~~~ 299 (385)
||++++..
T Consensus 167 GI~s~g~~ 174 (200)
T 2w7s_A 167 GILYAGSG 174 (200)
T ss_dssp EEEEEEC-
T ss_pred EEEecccc
Confidence 99998754
No 21
>1qtf_A Exfoliative toxin B; serine protease, superantigen, hydrolase; 2.40A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1dt2_A
Probab=99.80 E-value=1.4e-19 Score=168.46 Aligned_cols=142 Identities=24% Similarity=0.358 Sum_probs=103.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCe----EEEEecC------------CCeEeeEEEEECC---CCCeEEEEEcCCCC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASD----IRVTFAD------------QSAYDAKIVGFDQ---DKDVAVLRIDAPKD 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~----i~V~~~d------------g~~~~a~vv~~d~---~~DlAlLkv~~~~~ 211 (385)
...|+||+|+++ ||||||||+.+... +.+.... +..+.++.+..|+ .+|||||+++.+..
T Consensus 47 ~~~c~G~lI~~~-~VLTAaHcv~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~i~~hp~~~~~DiALLkl~~~~~ 125 (246)
T 1qtf_A 47 STLATGVLIGKN-TIVTNYHVAREAAKNPSNIIFTPAQNRDAEKNEFPTPYGKFEAEEIKESPYGQGLDLAIIKLKPNEK 125 (246)
T ss_dssp TEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEETCCCCTTTTCCCCTTCCEEEEEEESCTTCTTSCCEEEEECCCTT
T ss_pred CceEEEEEEECC-EEEECHHhCCCCCCCceEEEEecCccccccccccccCCceEEEEEEEeCCCCCCCCEEEEEEeCCcc
Confidence 458999999975 99999999976543 5555432 1367888888888 89999999987641
Q ss_pred ------CCcceecCCCCCCCCCCEEEEEeCCCCCCCce-EEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceee
Q 016647 212 ------KLRPIPIGVSADLLVGQKVYAIGNPFGLDHTL-TTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLL 284 (385)
Q Consensus 212 ------~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~-~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlv 284 (385)
.++++.|++...+..|+.++++|||.+..... ....+. ... .+.+++.+++|+|||||+
T Consensus 126 ~~~~~~~v~~i~L~~~~~~~~g~~v~v~G~p~g~~~~~~~~~~~~-------~~~-------~~~~~~~~~~GdSGGPlv 191 (246)
T 1qtf_A 126 GESAGDLIQPANIPDHIDIAKGDKYSLLGYPYNYSAYSLYQSQIE-------MFN-------DSQYFGYTEVGNSGSGIF 191 (246)
T ss_dssp SCCHHHHSCCCCCCSSCCCCTTCEEEEEECCTTTSTTCCEEEEEE-------ESS-------SSBEESCCCGGGTTCEEE
T ss_pred ccccccceeeeecCCccccCCCCEEEEEECCCCCCCceeEeeeee-------ecC-------cEEEeCCCCCCCchhheE
Confidence 36788887665678999999999998765421 111111 000 123456789999999999
Q ss_pred CCCccEEEEeecccCCCCCCCCceeeecccc
Q 016647 285 DSSGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (385)
Q Consensus 285 n~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~ 315 (385)
|.+|+||||++++.. ++++|+..
T Consensus 192 ~~~g~lvGI~s~g~~--------~~~ipi~~ 214 (246)
T 1qtf_A 192 NLKGELIGIHSGKGG--------QHNLPIGV 214 (246)
T ss_dssp CTTCCEEEEEEEEET--------TTTEEEEE
T ss_pred CCCCEEEEEEecccc--------Cccccchh
Confidence 999999999998642 46777644
No 22
>2o8l_A V8 protease, taphylococcal serine; serine protease, enzyme, hydrolase; 1.50A {Staphylococcus aureus} SCOP: b.47.1.1 PDB: 1qy6_A
Probab=99.79 E-value=3.9e-18 Score=161.28 Aligned_cols=135 Identities=21% Similarity=0.345 Sum_probs=102.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCe----EEEEec--------CCCeEeeEEEEECCCCCeEEEEEcCCC------CCC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASD----IRVTFA--------DQSAYDAKIVGFDQDKDVAVLRIDAPK------DKL 213 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~----i~V~~~--------dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~~ 213 (385)
..|+||+|+++ ||||||||+.+... +.|.+. +++....+++..+..+||||||++.+. ..+
T Consensus 34 ~~C~G~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~v 112 (274)
T 2o8l_A 34 FIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEVV 112 (274)
T ss_dssp EEEEEEEEETT-EEEECHHHHHTTTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCTTTSS
T ss_pred EEEEEEEEECC-EEEEChhhCcccCCCcceEEEEecccCcccccCccEEEEEEEeCCCCCcEEEEEecCccccccccccc
Confidence 57999999976 99999999976543 777643 344445567777788999999998752 357
Q ss_pred cceecCCCCCCCCCCEEEEEeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccE
Q 016647 214 RPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSL 290 (385)
Q Consensus 214 ~~l~l~~~~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~V 290 (385)
.++.|.....+..|+.++++|||.+.... ...|.+.... ...++.++.+|+|+||||||+.+|+|
T Consensus 113 ~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~l 180 (274)
T 2o8l_A 113 KPATMSNNAETQTNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNEV 180 (274)
T ss_dssp CCCEECCCTTCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESCCCCTTCTTCEEECTTSCE
T ss_pred ccccccccccccCCCEEEEEECCCCCCCceEEecCceEEecC------------CCeEEeCcccCCCCchhheeccCCeE
Confidence 88889765567889999999999764322 2344444221 24577889999999999999989999
Q ss_pred EEEeecccC
Q 016647 291 IGINTAIYS 299 (385)
Q Consensus 291 VGI~s~~~~ 299 (385)
|||++++..
T Consensus 181 vGIvS~G~~ 189 (274)
T 2o8l_A 181 IGIHWGGVP 189 (274)
T ss_dssp EEEEEEEET
T ss_pred EEEEeCccc
Confidence 999998753
No 23
>1wcz_A Glutamyl endopeptidase; virulence factor, hydrolase; 2.00A {Staphylococcus aureus} SCOP: b.47.1.1
Probab=99.77 E-value=6.1e-18 Score=159.39 Aligned_cols=136 Identities=21% Similarity=0.350 Sum_probs=102.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCC----eEEEEec--------CCCeEeeEEEEECCCCCeEEEEEcCCC------CC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGAS----DIRVTFA--------DQSAYDAKIVGFDQDKDVAVLRIDAPK------DK 212 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~----~i~V~~~--------dg~~~~a~vv~~d~~~DlAlLkv~~~~------~~ 212 (385)
...|+||||+++ ||||||||+.+.. .+.|.+. +++....+++..+..+||||||++.+. ..
T Consensus 33 ~~~CgG~lI~~~-~VLTAAHCv~~~~~~~~~i~V~~G~~~~~~~~~g~~~~~~i~~~~~~~DIALLkL~~~~~~~~~~~~ 111 (268)
T 1wcz_A 33 TFIASGVVVGKD-TLLTNKHVVDATHGDPHALKAFPSAINQDNYPNGGFTAEQITKYSGEGDLAIVKFSPNEQNKHIGEV 111 (268)
T ss_dssp EEEEEEEECSSS-EEEECHHHHGGGTTCGGGEEEEETCCBTTBCTTCCEEEEEEEECSSSSCCEEEEECCCTTSCCHHHH
T ss_pred CEEEEEEEEECC-EEEEChhhCCCccCCcceEEEEecccCcccccCCcEEEEEEecCCCCCcEEEEEecCcccccccccc
Confidence 357999999976 9999999997643 3777653 344445566677788999999998753 13
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCcc
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGS 289 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~ 289 (385)
+.++.|.....+..|+.++++|||.+.... ...+.++... ...++.++.+|+|+|||||++.+|+
T Consensus 112 v~pi~L~~~~~~~~g~~v~v~Gwg~~~~~~~~~~~~g~i~~~~------------~~~i~~~~~~c~GdSGGPLv~~~g~ 179 (268)
T 1wcz_A 112 VKPATMSNNAETQVNQNITVTGYPGDKPVATMWESKGKITYLK------------GEAMQYDLSTTGGNSGSPVFNEKNE 179 (268)
T ss_dssp SCCCCBCCCSSCCTTCEEEEEECCTTSSTTCEEEEEEEEEEEE------------TTEEEESBCCCTTCTTCEEECTTSC
T ss_pred cceeecccccccCCCCEEEEEECCCCCCCceEEeecceEEeeC------------CCeEEEecccCCCCccCeEEccCCE
Confidence 678888755557889999999999764322 2344444221 2457888999999999999998999
Q ss_pred EEEEeecccC
Q 016647 290 LIGINTAIYS 299 (385)
Q Consensus 290 VVGI~s~~~~ 299 (385)
||||++++..
T Consensus 180 lvGIvS~G~~ 189 (268)
T 1wcz_A 180 VIGIHWGGVP 189 (268)
T ss_dssp EEEEEEEEET
T ss_pred EEEEEeCCcc
Confidence 9999998753
No 24
>2vid_A Serine protease SPLB; hydrolase; 1.80A {Staphylococcus aureus}
Probab=99.76 E-value=5.1e-18 Score=152.57 Aligned_cols=132 Identities=27% Similarity=0.471 Sum_probs=98.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCCC---eEEEEe----cCCCeEe-eEEEEECCCCCeEEEEEcCCC-----------CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTF----ADQSAYD-AKIVGFDQDKDVAVLRIDAPK-----------DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~----~dg~~~~-a~vv~~d~~~DlAlLkv~~~~-----------~~ 212 (385)
+.|+||+|+++ ||||||||+.+.. .+.+.. .++..+. .+++.++..+||||||++.+. +.
T Consensus 22 ~~c~G~lI~~~-~VLTaaHcv~~~~~~~~v~v~~~~~~~~~~~~~~~~i~~~~~~~DiAll~l~~~~~~~~~~~~~~~~~ 100 (204)
T 2vid_A 22 KSATGFVVGKN-TILTNKHVSKNYKVGDRITAHPNSDKGNGGIYSIKKIINYPGKEDVSVIQVEERAIERGPKGFNFNDN 100 (204)
T ss_dssp SSCEEEEEETT-EEEECHHHHTTCCTTCEEEESCCSSSCCSCEEEEEEEEECSSSSCCEEEEECSEEEEEETTEEEHHHH
T ss_pred eeEEEEEEECC-EEEEChhHCCCccCCceEEEEeccccCCCcEEEeeEEecCCCCCeEEEEEEcCccccccccccccccc
Confidence 47999999986 9999999998754 454432 3455666 466677788999999998531 12
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCCC----ceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCc
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSG 288 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G 288 (385)
+.++.+.. .+..|+.++++|||.+... ....|.++... ...+..+...++|+|||||++.+|
T Consensus 101 v~pi~l~~--~~~~g~~~~~~G~g~~~~~~~~~~~~~g~v~~~~------------~~~~~~~~~~~~GdSGGPl~~~~g 166 (204)
T 2vid_A 101 VTPFKYAA--GAKAGERIKVIGYPHPYKNKYVLYESTGPVMSVE------------GSSIVYSAHTESGNSGSPVLNSNN 166 (204)
T ss_dssp CCCCCBCS--CCCTTCEEEEEECCCCCC--CCCEEEEEEEEEEE------------TTEEEECCCCCGGGTTCEEECTTS
T ss_pred ccccccCC--cCCCCCEEEEEeCCCCCCCCcceEeeccEEeecc------------CCeEEEecccCCCCccCcEECCCC
Confidence 36677753 5788999999999976443 23445554321 245778889999999999999999
Q ss_pred cEEEEeeccc
Q 016647 289 SLIGINTAIY 298 (385)
Q Consensus 289 ~VVGI~s~~~ 298 (385)
+||||++++.
T Consensus 167 ~lvGI~s~g~ 176 (204)
T 2vid_A 167 ELVGIHFASD 176 (204)
T ss_dssp CEEEEEEEEC
T ss_pred eEEEEEecCc
Confidence 9999999875
No 25
>1hpg_A Glutamic acid specific protease; serine protease, hydrolase-hydrolase inhibitor complex; 1.50A {Streptomyces griseus} SCOP: b.47.1.1
Probab=99.75 E-value=2.8e-17 Score=146.74 Aligned_cols=153 Identities=19% Similarity=0.282 Sum_probs=111.7
Q ss_pred EEE-EEEEcCC--CEEEecccccCCCCeEEEEecCCCeEeeEEEEEC-CCCCeEEEEEcCCCCCCccee--------cCC
Q 016647 153 SGS-GFVWDSK--GHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRPIP--------IGV 220 (385)
Q Consensus 153 ~GS-GfiI~~~--G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~l~--------l~~ 220 (385)
.|| ||+++++ +|||||+||+++...+. ..++....+++...+ +..|+||||++.+....+.+. +..
T Consensus 13 ~CT~Gfiv~~~g~~~ilT~~Hv~~~~~~v~--~~~~~~~~g~~~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~~~i~~ 90 (187)
T 1hpg_A 13 RCSAAFNVTKGGARYFVTAGHCTNISANWS--ASSGGSVVGVREGTSFPTNDYGIVRYTDGSSPAGTVDLYNGSTQDISS 90 (187)
T ss_dssp EEECCEEEEETTEEEEEECHHHHTTCSEEE--SSTTCCEEEEEEEEECSBSCEEEEEECSSCCCCSEEECSSSCEEECCE
T ss_pred cCcceEEEEECCeeEEEECcccCCCCCeEE--eCCCceeEEEEeCccCCCCCEEEEEeCCCCCcCceEEecCCceeeecc
Confidence 454 9999876 48999999999887654 456655556666555 788999999987432223333 334
Q ss_pred CCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCC
Q 016647 221 SADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSP 300 (385)
Q Consensus 221 ~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~ 300 (385)
...+++|+.|+.+|+|.+ .+.|+|+.+.+..... ......++++++.+++|+|||||++. +++|||+++....
T Consensus 91 ~~~~~~G~~v~~~G~~~g----~t~G~v~~~~~~v~~~--~~~~~~~i~t~~~~~~GdSGgpl~~~-~~~vGi~s~~~~~ 163 (187)
T 1hpg_A 91 AANAVVGQAIKKSGSTTK----VTSGTVTAVNVTVNYG--DGPVYNMVRTTACSAGGDSGGAHFAG-SVALGIHSGSSGC 163 (187)
T ss_dssp ECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET--TEEEEEEEEECCCCCTTCTTCEEEET-TEEEEEEEEESCC
T ss_pred ccCCCCCCEEEEEEcCCC----EeEEEEEEeEEEEEeC--CCeEeeeEEeccccCCCCCCCeEEEC-CEEEEEEEeeCCC
Confidence 567899999999999865 6889999887765321 11245688999999999999999986 5999999986432
Q ss_pred CCCCCCceeeecccc
Q 016647 301 SGASSGVGFSIPVDT 315 (385)
Q Consensus 301 ~~~~~~~g~aIP~~~ 315 (385)
. ...+.+|++|+..
T Consensus 164 ~-~~~~~~~~~~i~~ 177 (187)
T 1hpg_A 164 S-GTAGSAIHQPVTE 177 (187)
T ss_dssp B-TTBCCCEEEEHHH
T ss_pred C-CCCCceEEEEHHH
Confidence 1 1246788888764
No 26
>2qa9_E Streptogrisin-B; chymotrypsin-type serine peptidase, second tetrahedral inter tetrapeptide, beta barrels, alpha helix, hydrolase; HET: GOL; 1.18A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sge_E 1sgn_E 1sgy_E 1sgd_E 2nu0_E 2nu1_E 2gkv_E 2nu3_E 2nu4_E 2nu2_E* 2qaa_A* 2sgd_E 2sge_E 2sgf_E 2sgp_E 2sgq_E 3sgq_E 1sgp_E 1cso_E 1ct0_E ...
Probab=99.73 E-value=2.2e-17 Score=146.86 Aligned_cols=155 Identities=25% Similarity=0.364 Sum_probs=107.4
Q ss_pred eEEE-EEEEcC--CCEEEecccccCCCCeEEEEecCCCeEeeEEEEEC-CCCCeEEEEEcC-CC---CCCcceecCCCCC
Q 016647 152 GSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDA-PK---DKLRPIPIGVSAD 223 (385)
Q Consensus 152 ~~GS-GfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~-~~---~~~~~l~l~~~~~ 223 (385)
..|| ||++.. ++|||||+||+.+...+.+...+... .+++...+ +.+||||||++. +. ..++++.+.....
T Consensus 12 ~~ct~Gf~v~~~~~~~ilTaaHcv~~~~~~~v~~~~~~~-~g~~~~~~~~~~DiAll~l~~~~~~~~~~v~~~~l~~~~~ 90 (185)
T 2qa9_E 12 GRCSLGFNVRSGSTYYFLTAGHCTDGATTWWANSARTTV-LGTTSGSSFPNNDYGIVRYTNTTIPKDGTVGGQDITSAAN 90 (185)
T ss_dssp CEEECCEEEEETTEEEEEECHHHHTTCSEEESSTTSCSE-EEEEEEEECSBSCEEEEEECCSSSCCCCEETTEECCEECC
T ss_pred CcEeccEEEEECCceEEEECcccCCCCCcEEecCCCceE-eEEEeccccCCCCEEEEEecCCCccccCccceeeeCCccc
Confidence 4677 999964 36999999999998887776554444 35566666 889999999987 32 1235667754456
Q ss_pred CCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCC
Q 016647 224 LLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (385)
Q Consensus 224 ~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~ 303 (385)
+..|+.++++||+.+ .+.+.+..+..... ...+..+...++.+...++|+|||||++.+ ++|||++++.... .
T Consensus 91 ~~~g~~v~~~Gw~~~----~~~g~l~~~~~~v~-~~~~~~~~~~~~~~~cac~GDSGGPlv~~~-~~vGI~s~g~~~~-~ 163 (185)
T 2qa9_E 91 ATVGMAVTRRGSTTG----THSGSVTALNATVN-YGGGDVVYGMIRTNVCAEPGDSGGPLYSGT-RAIGLTSGGSGNC-S 163 (185)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEE-CSTTCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEEET-T
T ss_pred CCCCCEEEEecCCCc----eeEeEEEEEEEEEE-cCCCCEEeceEEecccCCCCCccceEEECC-EEEEEEEecCCCC-C
Confidence 788999999999753 45677776655432 111111234567778889999999999864 9999999864321 1
Q ss_pred CCCceeeeccc
Q 016647 304 SSGVGFSIPVD 314 (385)
Q Consensus 304 ~~~~g~aIP~~ 314 (385)
....++..|+.
T Consensus 164 ~~~p~vyt~v~ 174 (185)
T 2qa9_E 164 SGGTTFFQPVT 174 (185)
T ss_dssp TEEEEEEEEHH
T ss_pred CCCcEEEEEHH
Confidence 22456666654
No 27
>2oua_A Serine protease, protein NAPA; kinetic stability, acid stability, electros hydrolase; HET: 2AB; 1.85A {Nocardiopsis alba}
Probab=99.73 E-value=4.2e-17 Score=145.71 Aligned_cols=151 Identities=19% Similarity=0.256 Sum_probs=113.2
Q ss_pred eEEEEEEEc-CCC--EEEecccccCCCCeEEEEecCCCeEeeEEEEEC-CCCCeEEEEEcCCCCCCcc---------eec
Q 016647 152 GSGSGFVWD-SKG--HVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLRP---------IPI 218 (385)
Q Consensus 152 ~~GSGfiI~-~~G--~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~~---------l~l 218 (385)
.-.+||++. ++| +||||+||+.+...+ ...| +.++++..| +..|+||||++.+....+. +++
T Consensus 14 ~CTsGf~v~~~~G~~~ilTa~Hc~~~g~~v--~~~d---~~g~v~~~~~p~~DiAlikl~~~~~~~~~v~~~g~~~~~~l 88 (188)
T 2oua_A 14 RCSVGFAATNASGQPGFVTAGHCGSVGTQV--SIGN---GRGVFERSVFPGNDAAFVRGTSNFTLTNLVSRYNSGGYATV 88 (188)
T ss_dssp EEECCEEEECTTCCEEEEECGGGCCTTCEE--EETT---EEEEEEEEECSBSCEEEEEEEESCEEEEEEECGGGCSEEEC
T ss_pred cEecCEEEEeCCCCEEEEECcccCCCCCEE--EecC---ceEEEEeeCCCCCCEEEEEeCCCCccccceeecCCcceEec
Confidence 356799995 478 999999999765554 3555 889999999 9999999999864311221 346
Q ss_pred CCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeeccc
Q 016647 219 GVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 219 ~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
..+..+++|+.|+.+|++.+ .+.|+|+.+.+..... . .....+++++.++.+|+|||||+ .+|++|||+++..
T Consensus 89 ~~~~~~~vG~~v~~~G~~tG----~t~G~v~~~~~~v~~~-~-~~~~~~~~~~~~~~~GDSGgpl~-~~~~~vGi~s~~~ 161 (188)
T 2oua_A 89 SGSSTAPIGSQVCRSGSTTG----WYCGTIQARNQTVSYP-Q-GTVHSLTRTSVCAEPGDSGGSFI-SGTQAQGVTSGGS 161 (188)
T ss_dssp CBCCCCCTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEESCCCCTTCTTCEEE-ETTEEEEEEEEEE
T ss_pred cCccCCCCCCeEEEEEcCCC----eEEEEEEEEeeEEEeC-C-CcEeeeEeeeeecCCCCccceEE-ECCEEEEEEeccC
Confidence 66667899999999999876 5789999887765321 1 12345778888889999999999 4889999999864
Q ss_pred CCCCCCCCceeeecccc
Q 016647 299 SPSGASSGVGFSIPVDT 315 (385)
Q Consensus 299 ~~~~~~~~~g~aIP~~~ 315 (385)
... ...+.+|++|++.
T Consensus 162 ~~~-~~~~~~~~~pi~~ 177 (188)
T 2oua_A 162 GNC-RTGGTTFYQEVNP 177 (188)
T ss_dssp EET-TTEEEEEEEESHH
T ss_pred CCC-CCCCceEEEEHHH
Confidence 221 2346789999864
No 28
>1mbm_A NSP4 proteinase, chymotrypsin-like serine protease; serine proteinase, chymotrypsin-like proteinase, collapsed O HOLE, transferase; 2.00A {Equine arteritis virus} SCOP: b.47.1.3
Probab=99.68 E-value=1.1e-16 Score=139.18 Aligned_cols=115 Identities=19% Similarity=0.321 Sum_probs=90.8
Q ss_pred CCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEE---cCCCCCCcceecCCCCCCCC
Q 016647 150 PQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRI---DAPKDKLRPIPIGVSADLLV 226 (385)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv---~~~~~~~~~l~l~~~~~~~~ 226 (385)
+.+.||||+|+.+|++||++||+.+....+|++ +|++++ +.+++..|+|++++ +.+ ..+++++++. +++
T Consensus 13 ~~G~GsgF~i~~~g~vVTA~HVv~~~~~~~V~~-~G~~~~---Vgf~~~~DlA~l~v~~~~~~-g~~P~l~las---p~v 84 (198)
T 1mbm_A 13 SYGTGSVWTRNNEVVVLTASHVVGRANMATLKI-GDAMLT---LTFKKNGDFAEAVTTQSELP-GNWPQLHFAQ---PTT 84 (198)
T ss_dssp SEEEEEEEEETTEEEEEEEHHHHCTTCEEEEEE-TTEEEE---EECEEETTEEEEEECTTTSC-SCCCBCCBCC---CCS
T ss_pred cCCccceEEECCCeEEEEeeeEEccCceEEEEE-CCEEEE---eecccCCcEEEEEeeccCCC-CCCcccccCC---Ccc
Confidence 467999999999999999999999999999999 998888 67779999999999 544 3667888843 688
Q ss_pred CCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeec
Q 016647 227 GQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 227 G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~ 296 (385)
|+.-+. ...|.+..+.. ....++++ .+|+||||++|.+ +||||+++
T Consensus 85 G~a~~~----------~~tG~~~~l~g----------~~g~l~~t---~PGDSGsPVl~~~-~vIGV~T~ 130 (198)
T 1mbm_A 85 GPASWC----------TATGDEEGLLS----------GEVCLAWT---TSGDSGSAVVQGD-AVVGVHTG 130 (198)
T ss_dssp EEEEEE----------ETTEEEEEEEC----------SSCEECCC---CGGGTTCEEEETT-EEEEEEEE
T ss_pred cceEEe----------eccccEEEEec----------CCceeEcC---CCCCCCCccccCC-eEEEEEec
Confidence 884333 34455554431 13456666 6899999999988 99999998
No 29
>2ea3_A Chymotrypsin; celloulomonas, protease, hydrolase; 1.78A {Cellulomonas bogoriensis}
Probab=99.67 E-value=4e-16 Score=139.41 Aligned_cols=146 Identities=23% Similarity=0.360 Sum_probs=108.3
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEEC-CCCCeEEEEEcCCCCCCc--------ceecCCCCC
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIGVSAD 223 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~l~l~~~~~ 223 (385)
--+||+++. +||||+||+++.+.+ ...| +++++.| +..|+||||++.+....+ ++++.....
T Consensus 17 CT~Gf~~~~--~ilTa~Hc~~~~~~v--~~~d-----g~v~~~~~~~~DiAlikl~~~~~~~~~v~~~~g~~v~l~~s~~ 87 (189)
T 2ea3_A 17 CSIGFAVNG--GFITAGHCGRTGATT--ANPT-----GTFAGSSFPGNDYAFVRTGAGVNLLAQVNNYSGGRVQVAGHTA 87 (189)
T ss_dssp EECCEEETT--EEEECGGGCCTTCEE--ETTT-----EEEEEEECSBSCEEEEEECTTCEEEEEEECSSSCEEECCBCCC
T ss_pred CccCEEccC--eEEEchhcCCCCCEE--EeCC-----cEEEeeCCCCCCEEEEEECCCCccccceEecCCceeecCCCcC
Confidence 346899964 999999999887764 3444 7888888 899999999987531122 234666667
Q ss_pred CCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCC
Q 016647 224 LLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (385)
Q Consensus 224 ~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~ 303 (385)
+++|+.|+.+|++.+ .+.|+|+.+.+..... . .....+++++..+.+|+|||||++ +|++|||+++..... .
T Consensus 88 ~~vG~~v~~~G~~tG----~t~G~Vs~~~~~v~~~-~-~~~~~~~~~~~~~~~GDSGgpl~~-~~~~vGi~s~~~~~c-~ 159 (189)
T 2ea3_A 88 APVGSAVCRSGSTTG----WHCGTITALNSSVTYP-E-GTVRGLIRTTVCAEPGDSGGSLLA-GNQAQGVTSGGSGNC-R 159 (189)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEET-T
T ss_pred CCCCCEEEEEEeCCc----cEEEEEEecceEEEeC-C-ccCcceEEeeeeccCCCccCeEEE-CCEEEEEEeecCCCC-C
Confidence 899999999999865 5789998877764311 1 113357788888999999999995 789999999864211 1
Q ss_pred CCCceeeecccc
Q 016647 304 SSGVGFSIPVDT 315 (385)
Q Consensus 304 ~~~~g~aIP~~~ 315 (385)
..+.+|++|++.
T Consensus 160 ~~~~~~~~pi~~ 171 (189)
T 2ea3_A 160 TGGTTFFQPVNP 171 (189)
T ss_dssp TEEEEEEEEHHH
T ss_pred CCCcEEEEEHHH
Confidence 236889999875
No 30
>2pfe_A Protease A, alkaline serine protease, TFPA; beta-barrels, thermophIle, kinetic stabilit thermostability, protein folding; HET: 2AB; 1.44A {Thermobifida fusca}
Probab=99.65 E-value=3e-16 Score=139.89 Aligned_cols=146 Identities=20% Similarity=0.311 Sum_probs=108.0
Q ss_pred EEEEEcC--CCEEEecccccCCCCeEEEEecCCCeEeeEEEEEC-CCCCeEEEEEcCCCCCCc--------ceecCCCCC
Q 016647 155 SGFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFD-QDKDVAVLRIDAPKDKLR--------PIPIGVSAD 223 (385)
Q Consensus 155 SGfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d-~~~DlAlLkv~~~~~~~~--------~l~l~~~~~ 223 (385)
+||++.+ +++||||+||+++.+.+.+ +.++++..| +..|+||||++.+....+ ++++.....
T Consensus 18 ~Gf~v~~~~~~~ilTa~Hc~~~g~~v~~-------~~g~v~~~~~~~~D~Alikl~~~~~~~~~v~~~~g~~~~i~~~~~ 90 (186)
T 2pfe_A 18 IGFSVRQGSQTGFATAGHCGSTGTRVSS-------PSGTVAGSYFPGRDMGWVRITSADTVTPLVNRYNGGTVTVTGSQE 90 (186)
T ss_dssp CCEEEEETTEEEEEECGGGCCTTCEEBT-------TTEEEEEEECSBSCEEEEEECTTSEEEEEEECSSSCEEECCBCCC
T ss_pred eeEEEEcCCeeEEEEChhhCCCCCEEEE-------eeEEEEecCCCCCCEEEEEeCCCcccccceeccCCceEecCCCCC
Confidence 4999964 4689999999998777654 567888887 899999999987431122 233555667
Q ss_pred CCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCC
Q 016647 224 LLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGA 303 (385)
Q Consensus 224 ~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~ 303 (385)
+++|++|+.+|++.+ .+.|.|+.+.+..... . ..+..+++++....+|+|||||++ +|+++||+++..... .
T Consensus 91 ~~vG~~vc~~G~~tG----~t~G~vs~~~~tv~~~-~-~~~~~~~~~~~c~~~GDSGgpl~~-~~~~vGi~s~g~~~c-~ 162 (186)
T 2pfe_A 91 AATGSSVCRSGATTG----WRCGTIQSKNQTVRYA-E-GTVTGLTRTTACAEGGDSGGPWLT-GSQAQGVTSGGTGDC-R 162 (186)
T ss_dssp CCTTCEEEEEETTTE----EEEEEEEEEEEEEEET-T-EEEEEEEEESCCCCTTCTTCEEEE-TTEEEEEEEEEEEET-T
T ss_pred CCCCCeEEEEEeCCc----eEEEEEEEEeeeEEeC-C-ceEeceEeccEEecCCCccCeEEE-CCEEEEEEeecCCCC-C
Confidence 899999999999866 6789998887764321 1 123456778888889999999995 789999999864211 2
Q ss_pred CCCceeeecccc
Q 016647 304 SSGVGFSIPVDT 315 (385)
Q Consensus 304 ~~~~g~aIP~~~ 315 (385)
..+.+|++|++.
T Consensus 163 ~~~~~~~~pi~~ 174 (186)
T 2pfe_A 163 SGGITFFQPINP 174 (186)
T ss_dssp TEEEEEEEEHHH
T ss_pred CCCcEEEEEHHH
Confidence 335788898764
No 31
>2sga_A Proteinase A; hydrolase (serine proteinase); 1.50A {Streptomyces griseus} SCOP: b.47.1.1 PDB: 1sgc_A 3sga_E* 4sga_E 5sga_E 2sfa_A
Probab=99.63 E-value=6e-16 Score=137.11 Aligned_cols=150 Identities=23% Similarity=0.374 Sum_probs=98.5
Q ss_pred CeEEE-EEEEcC--CCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCC---CCcce-----ecC
Q 016647 151 QGSGS-GFVWDS--KGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKD---KLRPI-----PIG 219 (385)
Q Consensus 151 ~~~GS-GfiI~~--~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~---~~~~l-----~l~ 219 (385)
...|| ||+|.+ ++|||||+||+.+...+.+-..++ ...+.+||||||++.+.. .+.++ .+.
T Consensus 11 ~~~ct~G~~v~~~~~~~vlTaaHc~~~~~~~~~G~~~~--------~~~~~~DiAlikl~~~~~~~~~v~~i~~~~~~~~ 82 (181)
T 2sga_A 11 GSRCSLGFNVSVNGVAHALTAGHCTNISASWSIGTRTG--------TSFPNNDYGIIRHSNPAAADGRVYLYNGSYQDIT 82 (181)
T ss_dssp TEEEECCEEEEETTEEEEEECHHHHTTCSEETTEEEEE--------EECSBSCEEEEEESCGGGCCCEEECSSSCEEECC
T ss_pred CCcEeccEEEEECCceEEEECcccCCCCCceeecceeC--------CcCCCCCEEEEEccCCCcccceEEecCCcceeec
Confidence 34677 999974 359999999998765543222211 223678999999987431 12221 222
Q ss_pred CCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccC
Q 016647 220 VSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYS 299 (385)
Q Consensus 220 ~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~ 299 (385)
....+.+|+.++++|++.+ .+.|.++......... .+......++++...++|+|||||++.+ ++|||+++...
T Consensus 83 ~~~~~~~G~~v~~~G~~~~----~t~G~v~~~~~~v~~~-~~~~~~~~i~~~~c~~~GDSGGPlv~~~-~~vGI~s~g~~ 156 (181)
T 2sga_A 83 TAGNAFVGQAVQRSGSTTG----LRSGSVTGLNATVNYG-SSGIVYGMIQTNVCAQPGDSGGSLFAGS-TALGLTSGGSG 156 (181)
T ss_dssp EECCCCTTCEEEEEETTTE----EEEEEEEEEEEEEECG-GGCEEEEEEEESCCCCTTCTTCEEEETT-EEEEEEEEEEE
T ss_pred ccccCCCCCEEEEeecCCC----ccEEEEEEeEEEEECC-CCCEEeeeEecccccCCCCCCCEEEECC-EEEEEEEeeCC
Confidence 2356789999999998754 4667787766554211 1111334677788889999999999865 99999998753
Q ss_pred CCCCCCCceeeecccc
Q 016647 300 PSGASSGVGFSIPVDT 315 (385)
Q Consensus 300 ~~~~~~~~g~aIP~~~ 315 (385)
... ..+.++..|+..
T Consensus 157 ~~~-~~~~~v~~~v~~ 171 (181)
T 2sga_A 157 NCR-TGGTTFYQPVTE 171 (181)
T ss_dssp ETT-TEEEEEEEEHHH
T ss_pred CCc-CCCceEEEEHHH
Confidence 221 234677777653
No 32
>3fan_A Non-structural protein; chymotrypsin-like, N-terminal beta-barrels, C-terminal alpha-beta extra domain; 1.90A {Porcine respiratory and reproductivesyndrome virus} PDB: 3fao_A
Probab=99.54 E-value=8.6e-15 Score=129.27 Aligned_cols=117 Identities=24% Similarity=0.296 Sum_probs=80.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEE
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKV 230 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V 230 (385)
.+.|+||.|+.+++||||+||+.+.+. +...++.++.+ .+|+..|+|++++......+|.++++... ..|...
T Consensus 29 ~GsGt~F~i~g~~~VvTA~HVVg~~~~--vVt~~g~r~~~---~f~~~~D~All~i~~~~g~~P~lKlA~~~--~~G~a~ 101 (213)
T 3fan_A 29 MGSGGVFTIDGKIKCVTAAHVLTGNSA--RVSGVGFNQML---DFDVKGDFAIADCPNWQGVAPKAQFCEDG--WTGRAY 101 (213)
T ss_dssp EEEEEEEEETTEEEEEEEGGGSBTTEE--EEEETTEEEEE---ECEEETTEEEEECTTCCSCCCBCCBCCTT--CCEEEE
T ss_pred CCceEEEEECCcEEEEEeccEeCCCCE--EEecCCcEEEE---EecCCCcEEEEEccCcCCCCCcceeeeee--ccCceE
Confidence 478999999877899999999998887 44456666643 66889999999996534478888886322 233333
Q ss_pred EEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecc
Q 016647 231 YAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 231 ~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
+..-+ ....|.+.. ...+.++ ++|||||||+|.+|+||||++..
T Consensus 102 ~~~~~------gv~~G~i~~--------------~~al~~T---~pGdSGsPVvn~dG~VIGVHt~s 145 (213)
T 3fan_A 102 WLTSS------GVEPGVIGN--------------GFAFCFT---ACGDSGSPVITEAGELVGVHTGS 145 (213)
T ss_dssp EEETT------EEEEEEEET--------------TEEEESS---CCCSTTCEEEETTSCEEEEEEC-
T ss_pred EEEcc------Ccccccccc--------------CCEEEec---CCCCCCCccCCCCCcEEEEEecc
Confidence 33221 123343331 0122222 58999999999999999999875
No 33
>1pq7_A Trypsin; ultra-high resolution, catalysis, hydrolase; HET: ARG; 0.80A {Fusarium oxysporum} SCOP: b.47.1.2 PDB: 1fy4_A 1fy5_A 1gdn_A 1gdq_A 1gdu_A 1ppz_A* 1pq5_A* 1fn8_A* 1pq8_A* 1try_A 1xvm_A 1xvo_A* 2g51_A 2g52_A 2vu8_E 1pqa_A*
Probab=99.50 E-value=4.5e-13 Score=122.16 Aligned_cols=146 Identities=19% Similarity=0.251 Sum_probs=96.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCC--CeEEEEecC------CCeEeeEEEEECCC-----CCeEEEEEcCCC---CCCcc
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD------QSAYDAKIVGFDQD-----KDVAVLRIDAPK---DKLRP 215 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d------g~~~~a~vv~~d~~-----~DlAlLkv~~~~---~~~~~ 215 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. +..+..+-+..++. +||||||++.+. ..+.|
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~DiALl~L~~~~~~~~~v~p 102 (224)
T 1pq7_A 24 PWCGGSLLNAN-TVLTAAHCVSGYAQSGFQIRAGSLSRTSGGITSSLSSVRVHPSYSGNNNDLAILKLSTSIPSGGNIGY 102 (224)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTSCGGGEEEEESCSBSSSSSEEECEEEEEECTTCBTTBTCCEEEEESSCCCCBTTBCC
T ss_pred eEEEEEEecCC-EEEEcHHccCCCCCCceEEEeCcceecCCCEEEEEEEEEECCCCCCCCCCEEEEEeCCCCcCCCcccc
Confidence 47999999987 999999999753 457777743 34455666666654 599999998764 24567
Q ss_pred eecCC-CCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccC--CCCCCcccEEEEc-----cccCCCCCCc
Q 016647 216 IPIGV-SADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA--ATGRPIQDVIQTD-----AAINPGNSGG 281 (385)
Q Consensus 216 l~l~~-~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~--~~~~~~~~~i~~d-----~~i~~G~SGG 281 (385)
+.|.. ...+..|+.++++||..... .......+.-+....+.. .........+... ...|.|+|||
T Consensus 103 icL~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 182 (224)
T 1pq7_A 103 ARLAASGSDPVAGSSATVAGWGATSEGGSSTPVNLLKVTVPIVSRATCRAQYGTSAITNQMFCAGVSSGGKDSCQGDSGG 182 (224)
T ss_dssp CCBCCTTCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCTTCTTC
T ss_pred eecCCcccCCCCCCEEEEEecCCcCCCCCcccceeeEeEEEEEcHHHhhHhhcCCCCCCCeEEeecCCCCCCCCcCCCCc
Confidence 77763 23467899999999974322 122333333222221110 0011123344442 3578999999
Q ss_pred eeeCCCccEEEEeeccc
Q 016647 282 PLLDSSGSLIGINTAIY 298 (385)
Q Consensus 282 Plvn~~G~VVGI~s~~~ 298 (385)
||+..+|.++||++++.
T Consensus 183 PL~~~~g~l~Gi~S~g~ 199 (224)
T 1pq7_A 183 PIVDSSNTLIGAVSWGN 199 (224)
T ss_dssp EEECTTCCEEEEEEECS
T ss_pred ceECcCCeEEEEEEeCC
Confidence 99987899999999864
No 34
>1gvz_A Kallikrein-1E2; antigen, prostate specific antigen, hydrolase; 1.42A {Equus caballus} SCOP: b.47.1.2
Probab=99.44 E-value=2e-12 Score=118.74 Aligned_cols=142 Identities=20% Similarity=0.259 Sum_probs=89.2
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC------------------CCCeEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (385)
..|+|.+|+++ ||||+|||+. ..+.|.+.. ++.+..+-+..++ .+|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1gvz_A 24 FQCGGVLVHPQ-WVLTAAHCMS--DDYQIWLGRHNLSKDEDTAQFHQVSDSFLDPQFDLSLLKKKYLRPYDDISHDLMLL 100 (237)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGGCSSCCTTSCCTTCCEEE
T ss_pred eEEEeEEeeCC-EEEEcHHhCC--CCCeEEEeecccccCCCCceEEEeeeEecCCccCcccccccccccccccCCceEEE
Confidence 47999999987 9999999996 455666533 2234444444443 6799999
Q ss_pred EEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCC-CCceEEeE-----EeeeeeeeccCCCC-CCcccEEEEc---
Q 016647 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGL-DHTLTTGV-----ISGLRREISSAATG-RPIQDVIQTD--- 271 (385)
Q Consensus 205 kv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~-~~~~~~G~-----Vs~~~~~~~~~~~~-~~~~~~i~~d--- 271 (385)
+++.+. +.+.|+.|... ....|+.++++||.... ........ +.-+....+..... ......+...
T Consensus 101 ~L~~~~~~~~~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 179 (237)
T 1gvz_A 101 RLAQPARITDAVKILDLPTQ-EPKLGSTCYTSGWGLISTFTNRGSGTLQCVELRLQSNEKCARAYPEKMTEFVLCATHRD 179 (237)
T ss_dssp EESSCCCCBTTBCCCCCCSS-CCCTTCEEEEEEEECSCTTTCSEEEEEEEEEEEEECGGGGCSSCGGGCCTTEEEEECSS
T ss_pred EeCCCcccCCcEeeeECCCC-CCCCCCEEEEECCCcccCCCCCCCCccEEEEEeEeChhHhhhhhhhcCCCceEEEeeCC
Confidence 999764 24667888654 46789999999997542 11111222 22222211111100 0112334432
Q ss_pred --cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 272 --AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 272 --~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
...|.|+|||||+. +|.++||++++.
T Consensus 180 ~~~~~C~GDSGgPL~~-~~~l~GI~S~g~ 207 (237)
T 1gvz_A 180 DSGSICLGDSGGALIC-DGVFQGITSWGY 207 (237)
T ss_dssp TTCEECGGGTTCEEEE-TTEEEEEECCCS
T ss_pred CCCccCCCCccCcEee-CCEEEEEEEeCC
Confidence 24688999999995 789999999864
No 35
>1eq9_A Chymotrypsin; FIRE ANT, serine proteinase, hydrolase; HET: PMS; 1.70A {Solenopsis invicta} SCOP: b.47.1.2
Probab=99.44 E-value=9.5e-13 Score=119.92 Aligned_cols=144 Identities=22% Similarity=0.268 Sum_probs=93.7
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecC------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. ++.+..+-+..++ .+|||||+++.+. +.
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~~ 102 (222)
T 1eq9_A 24 HRCGASILDNN-NVLTAAHCVDGLSNLNRLKVHVGTNYLSESGDVYDVEDAVVNKNYDDFLLRNDVALVHLTNPIKFNDL 102 (222)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCSCGGGEEEEESCSBTTSCCEEEEEEEEEECTTCBTTTTBCCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhhhcCCCCCCCceEEEEECceecCCCCeEEEEEEEEECCCCCCCCCCCCEEEEEECCccccCCc
Confidence 47999999987 999999999763 457787743 3345555555543 4699999998764 24
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeecc-CCCCCCcccEEEEc----cccCCCCCCce
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS-AATGRPIQDVIQTD----AAINPGNSGGP 282 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~-~~~~~~~~~~i~~d----~~i~~G~SGGP 282 (385)
+.|+.|........|+.+++.||..... .......+.-+....+. .... .....+... ...|.|+||||
T Consensus 103 v~picL~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~-~~~~~~Ca~~~~~~~~C~GDSGgP 181 (222)
T 1eq9_A 103 VQPIKLSTNDEDLESNPCTLTGWGSTRLGGNTPNALQEIELIVHPQKQCERDQWR-VIDSHICTLTKRGEGACHGDSGGP 181 (222)
T ss_dssp BCCCEECSCCTTCTTSEEEEEECCCSSTTCCCCSBCEEEEEEEECHHHHHHHSSS-CCTTEEEECCCTTCBCCTTCTTCE
T ss_pred eEccCCCCCCcCCCCCEEEEEcccccCCCCcccchheEeEEEEeCHHHhCcccCC-CCccEEeecCCCCCeeeeCCccce
Confidence 6788887554446799999999975422 12233333222222111 1011 112334432 35789999999
Q ss_pred eeCCCccEEEEeeccc
Q 016647 283 LLDSSGSLIGINTAIY 298 (385)
Q Consensus 283 lvn~~G~VVGI~s~~~ 298 (385)
|+. +|.++||++++.
T Consensus 182 L~~-~~~l~GI~S~g~ 196 (222)
T 1eq9_A 182 LVA-NGAQIGIVSFGS 196 (222)
T ss_dssp EEE-TTEEEEEEEECS
T ss_pred EEE-CCEEEEEEEECC
Confidence 995 689999999864
No 36
>1azz_A Collagenase; complex (serine protease/inhibitor), serine protease, inhibitor, complex, protease-substrate interactions, collagen; 2.30A {Celuca pugilator} SCOP: b.47.1.2
Probab=99.43 E-value=1.3e-12 Score=119.46 Aligned_cols=145 Identities=21% Similarity=0.246 Sum_probs=93.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
...|+|.+|+++ ||||+|||+.+...+.|.+... ..+..+-+..++ .+||||||++.+. .
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~~~~~~ 101 (226)
T 1azz_A 23 MYFCGGSLISPE-WILTAAHCMDGAGFVDVVLGAHNIREDEATQVTIQSTDFTVHENYNSFVISNDIAVIRLPVPVTLTA 101 (226)
T ss_dssp TEEEEEEEEETT-EEEECHHHHTTCSCEEEEESCSBSSSCCTTCEEEEECCEEECTTCBTTTTBSCCEEEECSSCCCCCS
T ss_pred cEEEEEEEecCC-EEEEhHHhcCCCCceEEEEcceEcCCCCCccEEEEEEEEEECCCCCCCCCCCceEEEEECCccccCC
Confidence 357999999987 9999999999888888887432 223333333433 4699999998764 3
Q ss_pred CCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCCCCCcccEEEEc----cccCCCCCCc
Q 016647 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQTD----AAINPGNSGG 281 (385)
Q Consensus 212 ~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d----~~i~~G~SGG 281 (385)
.+.++.|.... ...|+.+++.||..... .......+.-+....+...........+... ...|.|+|||
T Consensus 102 ~v~picL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~Ca~~~~~~~~C~GDSGg 180 (226)
T 1azz_A 102 AIATVGLPSTD-VGVGTVVTPTGWGLPSDSALGISDVLRQVDVPIMSNADCDAVYGIVTDGNICIDSTGGKGTCNGDSGG 180 (226)
T ss_dssp SSCCCBCCSSC-CCTTCEEEEEESSCSSTTCSSSCSBCEECCEEEECHHHHHHHHSCCCTTEEEECCTTTCBCCTTCTTC
T ss_pred CcccccCCCCC-CCCCCEEEEEeCCccCCCCCCCCchhEEeeEEEEChhHhhhhhCcCCCceEeecCCCCCccCCCCCCc
Confidence 46777886544 47899999999974322 1222222222221111100001112344432 3578999999
Q ss_pred eeeCCCccEEEEeeccc
Q 016647 282 PLLDSSGSLIGINTAIY 298 (385)
Q Consensus 282 Plvn~~G~VVGI~s~~~ 298 (385)
||+ .+|.++||++++.
T Consensus 181 PL~-~~~~l~Gi~S~g~ 196 (226)
T 1azz_A 181 PLN-YNGLTYGITSFGA 196 (226)
T ss_dssp EEE-ETTEEEEEEEEEE
T ss_pred ceE-ECCEEEEEEEEEC
Confidence 999 5789999999875
No 37
>1mza_A Pro-granzyme K; apoptosis, serine protease, S1 family, hydrolase; 2.23A {Homo sapiens} SCOP: b.47.1.2 PDB: 1mzd_A
Probab=99.43 E-value=6.4e-12 Score=115.61 Aligned_cols=145 Identities=18% Similarity=0.224 Sum_probs=93.8
Q ss_pred eEEEEEEEcCCCEEEecccccCC---CCeEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK-- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~-- 210 (385)
..|+|.+|+++ ||||+|||+.+ ...+.|.+... +.+..+.+..++ .+|||||+++.+.
T Consensus 26 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~ 104 (240)
T 1mza_A 26 HVCGGVLIDPQ-WVLTAAHCQYRFTKGQSPTVVLGAHSLSKNEASKQTLEIKKFIPFSRVTSDPQSNDIMLVKLQTAAKL 104 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGSCTTCSCSCEEEEESCSBSSSCCTTCEEEEEEEEEECCCSSCSSSSSCCEEEEESSCCCC
T ss_pred eEEEEEEecCC-EEEECHHhCCCCCCCCCeEEEeCceecCCCCCceEEEEEEEEEeCCCccCCCCCceEEEEEeCCCccc
Confidence 47999999987 99999999864 45677776432 234444444443 4699999998764
Q ss_pred -CCCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeecc--CCC-C--CCcccEEEEc-----cc
Q 016647 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISS--AAT-G--RPIQDVIQTD-----AA 273 (385)
Q Consensus 211 -~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~--~~~-~--~~~~~~i~~d-----~~ 273 (385)
..+.++.|.....+..|+.+++.||..... .......+.-+....+. ... . ......+... ..
T Consensus 105 ~~~v~pi~l~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 184 (240)
T 1mza_A 105 NKHVKMLHIRSKTSLRSGTKCKVTGWGATDPDSLRPSDTLREVTVTVLSRKLCNSQSYYNGDPFITKDMVCAGDAKGQKD 184 (240)
T ss_dssp BTTBCCCCBCSSCCCCTTCEEEEEECCCSSTTCSSCCSBCEEEEEEECCHHHHTSTTTTTTTTCCCTTEEEEECTTSCCC
T ss_pred CCceeeeecCCcccCCCCCEEEEEeCCcCCCCCCCccccceEeEEEEeCHHHcCCcceeCCCCcCCCCeEeecCCCCCCc
Confidence 246677886545577899999999974321 22333333333322222 100 0 1122344442 35
Q ss_pred cCCCCCCceeeCCCccEEEEeeccc
Q 016647 274 INPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 274 i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
.|.|+|||||+. +|.++||++++.
T Consensus 185 ~C~GDSGGPL~~-~~~l~Gi~S~g~ 208 (240)
T 1mza_A 185 SCKGDAGGPLIC-KGVFHAIVSGGH 208 (240)
T ss_dssp CCTTCTTCEEEE-TTEEEEEECSSC
T ss_pred cCCCCCCCeeEE-CCEEEEEEEECC
Confidence 789999999995 689999999864
No 38
>1cgh_A Cathepsin G; inflammation, specificity, serine protease, hydrolase-hydrol inhibitor complex; HET: 1ZG; 1.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 1au8_A* 1t32_A* 1kyn_A*
Probab=99.43 E-value=7.1e-12 Score=114.24 Aligned_cols=143 Identities=22% Similarity=0.201 Sum_probs=91.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+.+ .+.|.+.. .+.+..+-+..++ .+||||||++.+. ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~~ 103 (224)
T 1cgh_A 27 SRCGGFLVRED-FVLTAAHCWGS--NINVTLGAHNIQRRENTQQHITARRAIRHPQYNQRTIQNDIMLLQLSRRVRRNRN 103 (224)
T ss_dssp CEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCBTT
T ss_pred eEEEEEEeeCC-EEEEhHHhCCC--CCEEEEeecccCCCCCccEEEEEEEEEcCCCCCCCCCcCCEEEEEECCCCcCCCc
Confidence 47999999987 99999999976 46666632 2334555555554 3599999998764 24
Q ss_pred CcceecCCCC-CCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCCC-CCcccEEEEc-----cccCCCCCCc
Q 016647 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG-RPIQDVIQTD-----AAINPGNSGG 281 (385)
Q Consensus 213 ~~~l~l~~~~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SGG 281 (385)
+.|+.|.... .+..|+.+++.||..... .......+.-+....+..... ......+... ...|.|+|||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 183 (224)
T 1cgh_A 104 VNPVALPRAQEGLRPGTLCTVAGWGRVSMRRGTDTLREVQLRVQRDRQCLRIFGSYDPRRQICVGDRRERKAAFKGDSGG 183 (224)
T ss_dssp BCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCCSBCEEEEEEBCCHHHHHHHCTTCCTTTEEEECCTTSCCBCCTTCTTC
T ss_pred eEeeECCCCCCCCCCCCEEEEEECCcCCCCCCCCcceEEEEEeeCHHHHHHHhCcCCCcceEeeccCCCCCeEeeCCCcc
Confidence 6777876443 357899999999975431 122333333222221111001 1112245442 3578999999
Q ss_pred eeeCCCccEEEEeeccc
Q 016647 282 PLLDSSGSLIGINTAIY 298 (385)
Q Consensus 282 Plvn~~G~VVGI~s~~~ 298 (385)
||+. +|.++||++++.
T Consensus 184 PL~~-~~~l~Gi~S~g~ 199 (224)
T 1cgh_A 184 PLLC-NNVAHGIVSYGK 199 (224)
T ss_dssp EEEE-TTEEEEEEEECC
T ss_pred ceEE-ccEEEEEEEEEC
Confidence 9996 679999999864
No 39
>1fxy_A Coagulation factor XA-trypsin chimera; protease, chloromethylketone, hydrolase-hydrolase I complex; HET: 0G6; 2.15A {Homo sapiens} SCOP: b.47.1.2
Probab=99.42 E-value=2.4e-12 Score=117.69 Aligned_cols=145 Identities=21% Similarity=0.275 Sum_probs=93.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
...|+|.+|+++ ||||+|||+.....+.|.+.+. ..+..+.+..++ .+||||||++.+. .
T Consensus 24 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (228)
T 1fxy_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (228)
T ss_dssp CEEEEEEECSSS-EEEECGGGTTSCSSCEEEEECSCTTTCCCCEEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CeeEEEEEeeCC-EEEECHHHCCCCCcEEEEECccCccccCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccCCC
Confidence 357999999987 9999999998767777777432 223444444443 4599999998764 2
Q ss_pred CCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEEc-----cccCCCCC
Q 016647 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINPGNS 279 (385)
Q Consensus 212 ~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d-----~~i~~G~S 279 (385)
.+.|+.|... ....|+.+++.||..... .......+.-+....+.... .......+... ...|.|+|
T Consensus 103 ~v~picLp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 181 (228)
T 1fxy_A 103 NVAPASLPTA-PPATGTKCLISGWGNTASSGADYPDELQCLDAPVLSQAKCEASYPGKITSNMFCVGFLEGGKDSCQGDS 181 (228)
T ss_dssp TBCCCCCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTCSCBCCTTCT
T ss_pred ceeccCCCCC-CCCCCCEEEEEecCccCCCCCCCCccceEEEEEEeCHHHhHhhcCCCCCCCEEEeccCCCCCccccCcc
Confidence 4677788643 467899999999974321 12233333322222111100 11122344442 35789999
Q ss_pred CceeeCCCccEEEEeeccc
Q 016647 280 GGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 280 GGPlvn~~G~VVGI~s~~~ 298 (385)
||||+. +|+++||++++.
T Consensus 182 GgPL~~-~~~l~Gi~S~g~ 199 (228)
T 1fxy_A 182 GGPVVC-NGQLQGVVSWGD 199 (228)
T ss_dssp TCEEEE-TTEEEEEEEECS
T ss_pred ccceEE-CCEEEEEEEECC
Confidence 999995 679999999863
No 40
>1npm_A Neuropsin; serine proteinase, glycoprotein; HET: NAG; 2.10A {Mus musculus} SCOP: b.47.1.2
Probab=99.42 E-value=3.8e-12 Score=116.16 Aligned_cols=141 Identities=22% Similarity=0.282 Sum_probs=90.4
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC----------CCCeEEEEEcCCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ----------DKDVAVLRIDAPK-- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~----------~~DlAlLkv~~~~-- 210 (385)
..|+|.+|+++ ||||+|||+. ..+.|.+.. ++.+..+-+..++ .+||||||++.+.
T Consensus 24 ~~CgGsLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L~~~~~~ 100 (225)
T 1npm_A 24 LICGGVLVGDR-WVLTAAHCKK--QKYSVRLGDHSLQSRDQPEQEIQVAQSIQHPCYNNSNPEDHSHDIMLIRLQNSANL 100 (225)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSBTTC--CCCEEECEEEEEECTTCCSSCTTCCTTCCEEEEESSCCCC
T ss_pred eEEEEEEECCC-EEEEhHHcCC--CCceEEEeeeEcCCCCCCcEEEEEEEEEECCCCCCCCccCccccEEEEeeCCcccC
Confidence 47999999987 9999999996 345666632 2334444444433 3499999998764
Q ss_pred -CCCcceecCCCCCCCCCCEEEEEeCCCCC------CCceEEeEEeeeeeeeccCCC-CCCcccEEEE----ccccCCCC
Q 016647 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGL------DHTLTTGVISGLRREISSAAT-GRPIQDVIQT----DAAINPGN 278 (385)
Q Consensus 211 -~~~~~l~l~~~~~~~~G~~V~~iG~p~g~------~~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~----d~~i~~G~ 278 (385)
..+.|+.|... ....|+.++++||.... ........+.-+....+.... .......+.. ....|.|+
T Consensus 101 ~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GD 179 (225)
T 1npm_A 101 GDKVKPVQLANL-CPKVGQKCIISGWGTVTSPQENFPNTLNCAEVKIYSQNKCERAYPGKITEGMVCAGSSNGADTCQGD 179 (225)
T ss_dssp SSSSCCCEECSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCCBCCTTC
T ss_pred CCceeceECCCC-CCCCCCEEEEEeCCcccCCCCCCCccceEeEEeeecHHHhhHHhCCCCCCCEEeecCCCCCeecCCC
Confidence 34678888654 46789999999997531 112233333322222111100 1112234444 24578999
Q ss_pred CCceeeCCCccEEEEeecc
Q 016647 279 SGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 279 SGGPlvn~~G~VVGI~s~~ 297 (385)
|||||+. +|+++||++++
T Consensus 180 SGgPL~~-~~~l~GI~S~g 197 (225)
T 1npm_A 180 SGGPLVC-DGMLQGITSWG 197 (225)
T ss_dssp TTCEEEE-TTEEEEEEEEC
T ss_pred CCchheE-CCEEEEEEEeC
Confidence 9999995 68999999986
No 41
>1a7s_A Heparin binding protein; serine protease homolog, endotoxin binding; HET: NAG; 1.12A {Homo sapiens} SCOP: b.47.1.2 PDB: 1ae5_A* 1fy3_A* 1fy1_A*
Probab=99.42 E-value=3.5e-12 Score=116.24 Aligned_cols=138 Identities=14% Similarity=0.200 Sum_probs=87.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCC--CeEEEEecCC----------CeEeeEEEEEC------CCCCeEEEEEcCCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ----------SAYDAKIVGFD------QDKDVAVLRIDAPK--- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg----------~~~~a~vv~~d------~~~DlAlLkv~~~~--- 210 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+... ..+..+.+..+ ..+|||||+++.+.
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~ 102 (225)
T 1a7s_A 24 HFCGGALIHAR-FVMTAASCFQSQNPGVSTVVLGAYDLRRRERQSRQTFSISSMSENGYDPQQNLNDLMLLQLDREANLT 102 (225)
T ss_dssp EEEEEEEEETT-EEEECGGGC----CCSEEEEESCSSTTSCCTTTCEEEEEEEEECSSCBTTTTBSCCEEEEESSCCCCB
T ss_pred cEEEEEEeeCC-EEEEchhccCCCCCCceEEEEeeeECCCCCCcceeEEeEEEEecccccCCCCcCCEEEEEcCCcccCC
Confidence 47999999987 999999999753 4577777432 23333333332 34699999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEeCCCCCCC-----ceEEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCCC
Q 016647 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNS 279 (385)
Q Consensus 211 ~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~S 279 (385)
..+.++.|.... .+..|+.+++.||...... ......+.-+... .+.. ..+.. ....|.|+|
T Consensus 103 ~~v~pi~L~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~-----~C~~--~~~Ca~~~~~~~~~C~GDS 175 (225)
T 1a7s_A 103 SSVTILPLPLQNATVEAGTRCQVAGWGSQRSGGRLSRFPRFVNVTVTPED-----QCRP--NNVCTGVLTRRGGICNGDG 175 (225)
T ss_dssp TTBCCCCCCCTTCCCCTTCEEEEEESCCSSTTCCCCSSCEEEEEEECCGG-----GSCT--TEEEEECSSSSCBCCTTCT
T ss_pred CceeEEEcCCCcCCCCCCCEEEEEeCCcCCCCCCcccccceeeeEECCHH-----Hhcc--CceEEeccCCCCCcccCCC
Confidence 245677775433 2468999999999754321 2222222221111 1111 33333 235789999
Q ss_pred CceeeCCCccEEEEeeccc
Q 016647 280 GGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 280 GGPlvn~~G~VVGI~s~~~ 298 (385)
||||+. +|.++||++++.
T Consensus 176 GgPl~~-~g~l~Gi~S~g~ 193 (225)
T 1a7s_A 176 GTPLVC-EGLAHGVASFSL 193 (225)
T ss_dssp TCEEEE-TTEEEEEEEEEC
T ss_pred cchhee-CCEEEEEEEEcc
Confidence 999996 479999999863
No 42
>2zch_P Prostate-specific antigen; human PSA, kallikrein related peptidases, antibodies, prostate cancer, glycoprotein, hydrolase, polymorphism; HET: NDG; 2.83A {Homo sapiens} PDB: 2zck_P* 2zcl_P* 3qum_P*
Probab=99.42 E-value=4.2e-12 Score=116.67 Aligned_cols=143 Identities=19% Similarity=0.278 Sum_probs=90.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC------------------CCCeEE
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAV 203 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAl 203 (385)
...|+|.+|+++ ||||+|||+.+... |.+.. ++.+..+-+..++ .+||||
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~~~~--v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIAL 99 (237)
T 2zch_P 23 RAVCGGVLVHPQ-WVLTAAHCIRNKSV--ILLGRHSLFHPEDTGQVFQVSHSFPHPLYDMSLLKNRFLRPGDDSSHDLML 99 (237)
T ss_dssp SEEEEEEEEETT-EEEECGGGCCSSCE--EEESCSBSSSCCTTCEEEEEEEEEECTTSCGGGGTSSSCCTTCBCTTCCEE
T ss_pred CeEEEEEEecCC-EEEEcHHhcCCCce--EEEecccccCCCCCcEEEEEEEEecCCCcchhhhcccccccCCCCCcceEE
Confidence 457999999987 99999999986543 44321 2344444444443 569999
Q ss_pred EEEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEEc--
Q 016647 204 LRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-- 271 (385)
Q Consensus 204 Lkv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d-- 271 (385)
|+++.+. ..+.++.|... ....|+.+++.||..... .......+.-+....+.... .......+...
T Consensus 100 l~L~~~~~~~~~v~pi~Lp~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 178 (237)
T 2zch_P 100 LRLSEPAELTDAVKVMDLPTQ-EPALGTTCYASGWGSIEPEEFLTPKKLQCVDLHVISNDVCAQVHPQKVTKFMLCAGRW 178 (237)
T ss_dssp EEESSCCCCCSSCCCCCCCSS-CCCTTCEEEEEESCCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSBCCTTEEEEECT
T ss_pred EEeCCCCccCCcEeeeECCCC-CCCCCCEEEEEeCCccCCCCCcCCcccEEeEEEEeCHHHhcccccCCCCceEEeecCC
Confidence 9998764 24667778653 467899999999975322 12223333322222111100 01112344432
Q ss_pred ---cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 272 ---AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 272 ---~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
...|.|+|||||+. ++.++||+|++.
T Consensus 179 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~ 207 (237)
T 2zch_P 179 TGGKSTCSGDSGGPLVC-NGVLQGITSWGS 207 (237)
T ss_dssp TCSCBCCTTCTTCEEES-SSSEEEEEEECC
T ss_pred CCCCcccCCCccCeEEE-CCEEEEEEEeCc
Confidence 35789999999995 689999999864
No 43
>1fuj_A PR3, myeloblastin; hydrolase, serine protease, glycoprotein, zymogen, hydrolase protease); HET: NAG FUC; 2.20A {Homo sapiens} SCOP: b.47.1.2
Probab=99.42 E-value=1e-11 Score=112.71 Aligned_cols=136 Identities=21% Similarity=0.316 Sum_probs=87.9
Q ss_pred eEEEEEEEcCCCEEEecccccCCCC--eEEEEecCC---------CeEeeEEEEEC------CCCCeEEEEEcCCC---C
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFADQ---------SAYDAKIVGFD------QDKDVAVLRIDAPK---D 211 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~--~i~V~~~dg---------~~~~a~vv~~d------~~~DlAlLkv~~~~---~ 211 (385)
..|+|.+|+++ ||||+|||+.+.. .+.|.+... +.+..+.+..+ ..+|||||+++.+. .
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiALl~L~~~~~~~~ 105 (221)
T 1fuj_A 27 HFCGGTLIHPS-FVLTAAHCLRDIPQRLVNVVLGAHNVRTQEPTQQHFSVAQVFLNNYDAENKLNDILLIQLSSPANLSA 105 (221)
T ss_dssp CCEEEEEEETT-EEEECGGGGSSSCGGGEEEEESCSBTTSCCTTCEEEEEEEEEECCCBTTTTBCCCEEEEESSCCCCCS
T ss_pred EEEEEEEecCC-EEEEchHhcCcCCCCceEEEEeeeeccCCCCceEEEEEEEEEeCCCCCCCCcccEEEEEeCCccccCC
Confidence 46999999987 9999999998643 577777431 23333333332 34699999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCCCCCC-----ceEEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCCCC
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNSG 280 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SG 280 (385)
.+.|+.|.... .+..|+.+++.||...... ......+..+ . ..+.. ..+.. ....|.|+||
T Consensus 106 ~v~picL~~~~~~~~~~~~~~~~GwG~~~~~~~~~~~l~~~~~~~~-~-----~~C~~--~~~Ca~~~~~~~~~C~GDSG 177 (221)
T 1fuj_A 106 SVATVQLPQQDQPVPHGTQCLAMGWGRVGAHDPPAQVLQELNVTVV-T-----FFCRP--HNICTFVPRRKAGICFGDSG 177 (221)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEEEESSBSCSSSCBCSBCEEEEEEEE-C-----TTCCT--TEEEEECSSSSCBCCTTCTT
T ss_pred cceeeECCCCcCCCCCCCEEEEEEeCCCCCCCCHHHHhhcccceEE-e-----eecCC--ceeeeccCCCCCCCCCCCCC
Confidence 46777776543 2568999999999743321 1222222211 1 11111 12332 2457899999
Q ss_pred ceeeCCCccEEEEeecc
Q 016647 281 GPLLDSSGSLIGINTAI 297 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~ 297 (385)
|||+. +|.++||+++.
T Consensus 178 gPL~~-~~~l~Gi~s~~ 193 (221)
T 1fuj_A 178 GPLIC-DGIIQGIDSFV 193 (221)
T ss_dssp CEEEE-TTEEEEEEEEC
T ss_pred CeeEE-CCEEeEEEEEe
Confidence 99996 78999999973
No 44
>2z7f_E Leukocyte elastase; serine protease, serine protease inhibitor, disease mutation glycoprotein, hydrolase, zymogen, secreted; HET: NAG FUC; 1.70A {Homo sapiens} SCOP: b.47.1.2 PDB: 1h1b_A* 1ppg_E* 1ppf_E* 3q76_A* 3q77_A* 1hne_E 2rg3_A* 1b0f_A*
Probab=99.41 E-value=3.6e-12 Score=115.65 Aligned_cols=136 Identities=16% Similarity=0.233 Sum_probs=88.2
Q ss_pred eEEEEEEEcCCCEEEecccccCCC--CeEEEEecCC---------CeEeeEEEEEC------CCCCeEEEEEcCCC---C
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ---------SAYDAKIVGFD------QDKDVAVLRIDAPK---D 211 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg---------~~~~a~vv~~d------~~~DlAlLkv~~~~---~ 211 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+... +.+..+.+..+ ..+||||||++.+. +
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~~~~~~ 102 (218)
T 2z7f_E 24 HFCGATLIAPN-FVMSAAHCVANVNVRAVRVVLGAHNLSRREPTRQVFAVQRIFENGYDPVNLLNDIVILQLNGSATINA 102 (218)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTSCGGGCEEEESCSBTTSCCTTCEEEEEEEEEESCCBTTTTBSCCEEEEESSCCCCSS
T ss_pred cEEEEEEccCC-EEEEcHHhcCCCCcCcEEEEEeceecCCCCCceEEEEEEEEEccCCCCCCCCCCEEEEEECCcCcCCC
Confidence 47999999987 999999999764 3577777532 23444433333 34699999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCCCCCC-----ceEEeEEeeeeeeeccCCCCCCcccEEEE-----ccccCCCCCC
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATGRPIQDVIQT-----DAAINPGNSG 280 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-----d~~i~~G~SG 280 (385)
.+.|+.|.... .+..|+.++++||...... ......+.-+ . ..+... .+.. ....|.|+||
T Consensus 103 ~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~-~-----~~C~~~--~~Ca~~~~~~~~~C~GDSG 174 (218)
T 2z7f_E 103 NVQVAQLPAQGRRLGNGVQCLAMGWGLLGRNRGIASVLQELNVTVV-T-----SLCRRS--NVCTLVRGRQAGVCFGDSG 174 (218)
T ss_dssp SCCCCCCCCTTCCCCTTCEEEEEESSBCSSSCCBCSBCEEEEEEEE-C-----TTCCTT--SEEEECTTSCCBCCTTCTT
T ss_pred ceeccCcCCCCCCCCCCCEEEEEEeCCCCCCCCccchheEeeeEEe-h-----hHcCcc--eeeeccCCCCCeeCCCcCC
Confidence 46677776543 3568999999999744321 1222222221 1 111111 2322 2457899999
Q ss_pred ceeeCCCccEEEEeecc
Q 016647 281 GPLLDSSGSLIGINTAI 297 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~ 297 (385)
|||+. +|.++||+++.
T Consensus 175 gPl~~-~~~l~Gi~S~~ 190 (218)
T 2z7f_E 175 SPLVC-NGLIHGIASFV 190 (218)
T ss_dssp CEEEE-TTEEEEEEEEE
T ss_pred CceEE-ccEEEEEEEeC
Confidence 99995 67999999983
No 45
>2l97_A HTRA, putative serine protease; HTRA-PDZ, protein binding; NMR {Streptococcus pneumoniae}
Probab=99.41 E-value=8e-13 Score=111.42 Aligned_cols=67 Identities=25% Similarity=0.389 Sum_probs=60.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.+.++++++ +||++||+|++|||++|.++.++.+++...++|++++++|+|+|+.+++++++.+.|-
T Consensus 63 ~V~~~spA~-aGL~~GD~I~~inG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 129 (134)
T 2l97_A 63 SVQSNMPAN-GHLEKYDVITKVDDKEIASSTDLQSALYNHSIGDTIKITYYRNGKEETTSIKLNKLEH 129 (134)
T ss_dssp ECSTTSGGG-TTSCSSCEEEEETTEECCCHHHHHHHHHHSSTTCEEEEEEEETTEEEEEEEECCCC--
T ss_pred EECCCCchH-HCCCCCCEEEEECCEEcCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEcccCc
Confidence 456788899 9999999999999999999999999999888999999999999999999999988763
No 46
>2xw9_A Complement factor D; immune system, hydrolase, serine protease, alternative pathw; HET: GOL; 1.20A {Homo sapiens} PDB: 2xwb_I* 1bio_A 1dfp_A* 1dic_A* 1dsu_A 1hfd_A 4d9r_A 1fdp_A 2xwa_A 1dst_A 4d9q_A
Probab=99.41 E-value=8e-12 Score=114.00 Aligned_cols=145 Identities=21% Similarity=0.302 Sum_probs=90.9
Q ss_pred eEEEEEEEcCCCEEEecccccCCCC--eEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGAS--DIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~--~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (385)
..|+|.+|+++ ||||+|||+.+.. .+.|.+... +.+..+-+..++ .+||||||++.+.
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIAll~L~~~~~~~ 102 (228)
T 2xw9_A 24 HLCGGVLVAEQ-WVLSAAHCLEDAADGKVQVLLGAHSLSQPEPSKRLYDVLRAVPHPDSQPDTIDHDLLLLQLSEKATLG 102 (228)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCTTCCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCB
T ss_pred eEEEEEEEeCC-EEEEcHHhCCCCCCCceEEEEcccccCCCCCcceEEEEEEEEeCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 47999999987 9999999997543 677877431 234445444443 4699999998764
Q ss_pred CCCcceecCCC-CCCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCC---CCCcccEEEEc---cccCCCC
Q 016647 211 DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT---GRPIQDVIQTD---AAINPGN 278 (385)
Q Consensus 211 ~~~~~l~l~~~-~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~---~~~~~~~i~~d---~~i~~G~ 278 (385)
..+.|+.|... ..+..|+.+++.||..... .......+.-+....+.... .......+... ...|.|+
T Consensus 103 ~~v~pi~l~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 182 (228)
T 2xw9_A 103 PAVRPLPWQRVDRDVAPGTLCDVAGWGIVNHAGRRPDSLQHVLLPVLDRATCNRRTHHDGAITERLMCAESNRRDSCKGD 182 (228)
T ss_dssp TTBCCCCBCCSCCCCCTTC-CEEEESSCCSTTCCCCSBCEEEECCEECHHHHTSTTTTTTCCCTTEEEECCSSCBCCTTC
T ss_pred CCeeecccCCcccCCCCCCEEEEEEecccCCCCCCCchheEEEEEEcChhHhcCccccCCcccCCEEecCCCCCccCCCC
Confidence 24567777543 3467899999999974322 12222222222222221111 11122334432 3578999
Q ss_pred CCceeeCCCccEEEEeeccc
Q 016647 279 SGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 279 SGGPlvn~~G~VVGI~s~~~ 298 (385)
|||||+. +|.++||++++.
T Consensus 183 sGgPL~~-~~~l~Gi~s~g~ 201 (228)
T 2xw9_A 183 AGGPLVC-GGVLEGVVTSGS 201 (228)
T ss_dssp TTCEEEE-TTEEEEEECCSC
T ss_pred CcccEEE-CCEEEEEEeecC
Confidence 9999996 679999998764
No 47
>4ag1_A Chymase; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Homo sapiens} PDB: 4afs_A 4afu_A 4afz_A* 4afq_A 4ag2_A* 1nn6_A* 1klt_A* 3n7o_A* 1t31_A* 1pjp_A* 2hvx_A* 3s0n_A* 2rdl_A
Probab=99.40 E-value=3.1e-11 Score=109.83 Aligned_cols=160 Identities=18% Similarity=0.160 Sum_probs=97.6
Q ss_pred CCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEEC
Q 016647 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFD 196 (385)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d 196 (385)
-|-+|.|....... ....|+|.+|+++ ||||+|||+.. .+.|.+... +.+...-+..+
T Consensus 12 ~Pw~v~l~~~~~~~----------~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~h 78 (226)
T 4ag1_A 12 RPYMAYLEIVTSNG----------PSKFCGGFLIRRN-FVLTAAHCAGR--SITVTLGAHNITEEEDTWQKLEVIKQFRH 78 (226)
T ss_dssp STTEEEEEEECSSS----------SCEEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred CCcEEEEEEEcCCC----------cccEEEEEEEeCC-EEEECcccCCC--CeEEEeCCcccCCCCCcceEEEEEEEEeC
Confidence 45677776532111 1347999999987 99999999954 566766431 23444444555
Q ss_pred CC-------CCeEEEEEcCCC---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCC
Q 016647 197 QD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT 260 (385)
Q Consensus 197 ~~-------~DlAlLkv~~~~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~ 260 (385)
+. +||||||++.+. ..+.++.+.... .+..|+.+++.||..... .......+.-+....+....
T Consensus 79 p~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~ 158 (226)
T 4ag1_A 79 PKYNTSTLHHDIMLLKLKEKASLTLAVGTLPFPSQFNFVPPGRMCRVAGWGRTGVLKPGSDTLQEVKLRLMDPQACSHFR 158 (226)
T ss_dssp TTCCTTTCTTCCEEEEESSCCCCCSSSCCCCCC-----CCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECGGGGTTST
T ss_pred CCCCCCCCcCcEEEEEECCCCccCCceeccccCCcccCCCCCCEEEEEECCCCCCCCCCCCEeEEEEEEEcChHHccccc
Confidence 43 599999998754 245566665433 356899999999974321 22333333333333232111
Q ss_pred CCCcccEEEEc-----cccCCCCCCceeeCCCccEEEEeecccC
Q 016647 261 GRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYS 299 (385)
Q Consensus 261 ~~~~~~~i~~d-----~~i~~G~SGGPlvn~~G~VVGI~s~~~~ 299 (385)
.......+... ...|.|+|||||+. ++.++||++++..
T Consensus 159 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~ 201 (226)
T 4ag1_A 159 DFDHNLQLCVGNPRKTKSAFKGDSGGPLLC-AGVAQGIVSYGRS 201 (226)
T ss_dssp TCCTTTEEEESCTTSCCBCCTTCTTCEEEE-TTEEEEEEEECBT
T ss_pred CcCccceEeeccCCCCCcCccCCCCCceEE-cCEEEEEEEECCC
Confidence 11123344442 35688999999995 7799999998653
No 48
>3mfj_A Cationic trypsin; serine proteinase, hydrolase; 0.80A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.39 E-value=7.4e-12 Score=114.13 Aligned_cols=142 Identities=20% Similarity=0.237 Sum_probs=91.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+. ..+.|.+.. ++.+..+-+..++ .+||||||++.+. ..
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 99 (223)
T 3mfj_A 23 HFCGGSLINSQ-WVVSAAHCYK--SGIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSR 99 (223)
T ss_dssp EEEEEEEEETT-EEEECGGGCC--SSCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEecCC-EEEEhHHhcC--CCcEEEECCceecccCCCcEEEEeeEEEECCCCCCCCCCCCEEEEEeCCCcccCCc
Confidence 47999999987 9999999995 456666643 2234444444443 4699999998764 34
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEEc-----cccCCCCCC
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINPGNSG 280 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d-----~~i~~G~SG 280 (385)
+.|+.|... ....|+.+++.||..... .......+.-+....+.... .......+... ...|.|+||
T Consensus 100 v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 178 (223)
T 3mfj_A 100 VASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSG 178 (223)
T ss_dssp BCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTT
T ss_pred EeeeECCCC-CCCCCCEEEEEeeeccCCCCCcccchheEEEEEEeCHHHhhhhhcCcCCCCEEEccCCCCCCCcCCCCcc
Confidence 678888654 357899999999975421 12233333322222111100 11123345442 357899999
Q ss_pred ceeeCCCccEEEEeeccc
Q 016647 281 GPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~~ 298 (385)
|||+. +|+++||++++.
T Consensus 179 gPL~~-~~~l~GI~S~g~ 195 (223)
T 3mfj_A 179 GPVVC-SGKLQGIVSWGS 195 (223)
T ss_dssp CEEEE-TTEEEEEEEECS
T ss_pred cceEE-CCEEEEEEEECC
Confidence 99996 689999999863
No 49
>1ao5_A Glandular kallikrein-13; serine protease, protein maturation; HET: NAG; 2.60A {Mus musculus} SCOP: b.47.1.2 PDB: 1sgf_G*
Probab=99.39 E-value=4.6e-12 Score=116.36 Aligned_cols=141 Identities=21% Similarity=0.211 Sum_probs=89.4
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC------------------CCCeEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ------------------DKDVAVL 204 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~------------------~~DlAlL 204 (385)
..|+|.+|+++ ||||+|||+. +.+.|.+... +.+..+-+..++ .+|||||
T Consensus 24 ~~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (237)
T 1ao5_A 24 HICGGVLLDRN-WVLTAAHCYV--DQYEVWLGKNKLFQEEPSAQHRLVSKSFPHPGFNMSLLMLQTIPPGADFSDDLMLL 100 (237)
T ss_dssp EEEEEEEEETT-EEEECTTCCC--SSCEEEESCCBSSSCCSSCEECCEEEEEECTTSCGGGGGCSSCCTTCCCTTCCEEE
T ss_pred eEEEEEEeeCC-EEEECHHHCC--CCCEEEecccccccCCCCcEEEEEEEEEcCCCcCcccccccccccccCCCCCEEEE
Confidence 47999999987 9999999996 3556666432 223333333332 6799999
Q ss_pred EEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEEc---
Q 016647 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQTD--- 271 (385)
Q Consensus 205 kv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d--- 271 (385)
+++.+. +.+.|+.|... ....|+.+++.||..... .......+.-+....+.... .......+...
T Consensus 101 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 179 (237)
T 1ao5_A 101 RLSKPADITDVVKPIALPTK-EPKPGSKCLASGWGSITPTRWQKPDDLQCVFITLLPNENCAKVYLQKVTDVMLCAGEMG 179 (237)
T ss_dssp EESSCCCCCSSSCCCCCCCS-CCCTTCEEEEEESCCSSCC-CCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECTT
T ss_pred EeCCccccCCceeCCCcCCC-CCCCCCEEEEEECCccCCCCCCCCCcccEEEEEecChhHhhhhhcccCCCCEEEEccCC
Confidence 998764 24667888654 467899999999974322 12233333322222111100 11122344442
Q ss_pred --cccCCCCCCceeeCCCccEEEEeecc
Q 016647 272 --AAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 272 --~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
...|.|+|||||+. +|.++||++++
T Consensus 180 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g 206 (237)
T 1ao5_A 180 GGKDTCRDDSGGPLIC-DGILQGTTSYG 206 (237)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEEEEC
T ss_pred CCCCCCCCCCcceEEE-CCEEeEEEeEc
Confidence 35789999999996 78999999986
No 50
>1lo6_A Kallikrein 6, HK6; serine protease, human kallikrein 6, benzamidine, protease, brain serine protease, myelencephalon specific protease, MSP, ZYME; 1.56A {Homo sapiens} SCOP: b.47.1.2 PDB: 1l2e_A 1gvl_A 4d8n_A*
Probab=99.39 E-value=6.6e-12 Score=114.46 Aligned_cols=141 Identities=21% Similarity=0.275 Sum_probs=89.9
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+.. .+.|.+.. ++.+..+-+..++ .+|||||+++.+. +.
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIAll~L~~~~~~~~~ 100 (223)
T 1lo6_A 24 LLCGGVLIHPL-WVLTAAHCKKP--NLQVFLGKHNLRQRESSQEQSSVVRAVIHPDYDAASHDQDIMLLRLARPAKLSEL 100 (223)
T ss_dssp EEEEEEEEETT-EEEECGGGCCT--TCEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred EEEEeEEecCC-EEEECccCCCC--CeEEEEcceecCCCCCCcEEEEEEEEEECCCCCCCCCcCeEEEEEECCcccCCCc
Confidence 47999999987 99999999974 45565532 2234444444443 4699999998764 24
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCC-CCCcccEEEEc-----cccCCCCCCce
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINPGNSGGP 282 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d-----~~i~~G~SGGP 282 (385)
+.|+.|... ....|+.++++||..... .......+.-+....+.... .......+... ...|.|+||||
T Consensus 101 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgP 179 (223)
T 1lo6_A 101 IQPLPLERD-CSANTTSCHILGWGKTADGDFPDTIQCAYIHLVSREECEHAYPGQITQNMLCAGDEKYGKDSCQGDSGGP 179 (223)
T ss_dssp BCCCCBCCC-TTCCCCEEEEEESSCCTTSSCCSBCEEEEEEEECHHHHHHHSTTTCCTTEEEEECTTTCCBCCTTTTTCE
T ss_pred eeecccCCC-CCCCCCEEEEEEECCCCCCCcCceeeEEEEEEeCHHHhhhhhCCCCCCCeEEeecCCCCCeeccccCCCc
Confidence 667888644 357899999999975421 12233333322222111100 11123344442 35789999999
Q ss_pred eeCCCccEEEEeecc
Q 016647 283 LLDSSGSLIGINTAI 297 (385)
Q Consensus 283 lvn~~G~VVGI~s~~ 297 (385)
|+. +|+++||++++
T Consensus 180 L~~-~~~l~Gi~S~g 193 (223)
T 1lo6_A 180 LVC-GDHLRGLVSWG 193 (223)
T ss_dssp EEE-TTEEEEEEEEC
T ss_pred EEe-CCEEEEEEeeC
Confidence 995 67999999986
No 51
>1hj8_A Trypsin I; hydrolase, radiation damage, disulphide bond breakage, salmon, atomic resolution; HET: BAM; 1.00A {Salmo salar} SCOP: b.47.1.2 PDB: 1utm_A 1utj_A 1utl_M* 1utk_A 1bit_A 2sta_E 1bzx_E 2stb_E 2zpq_A 2zps_A 2tbs_A 2zpr_A 1mbq_A 2eek_A
Probab=99.39 E-value=1.1e-11 Score=112.83 Aligned_cols=142 Identities=18% Similarity=0.251 Sum_probs=90.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+.. .+.|.+.. ++.+..+-+..++ .+||||||++.+. ..
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 99 (222)
T 1hj8_A 23 HFCGGSLVNEN-WVVSAAHCYKS--RVEVRLGEHNIKVTEGSEQFISSSRVIRHPNYSSYNIDNDIMLIKLSKPATLNTY 99 (222)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SCEEEESCSBTTSCCSCCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCSSS
T ss_pred cEEEeEEecCC-EEEECHHhcCC--CeEEEEcccccccCCCCcEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCCc
Confidence 47999999987 99999999973 45566532 2334444444443 4699999998764 24
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCC-CCCcccEEEEc-----cccCCCCCCc
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINPGNSGG 281 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d-----~~i~~G~SGG 281 (385)
+.|+.|... .+..|+.+++.||..... .......+.-+....+.... .......+... ...|.|+|||
T Consensus 100 v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 178 (222)
T 1hj8_A 100 VQPVALPTS-CAPAGTMCTVSGWGNTMSSTADSNKLQCLNIPILSYSDCNNSYPGMITNAMFCAGYLEGGKDSCQGDSGG 178 (222)
T ss_dssp CCCCBCCSS-CCCTTCEEEEEESSCCCCSSCCTTBCEEEEEEBCCHHHHHHHSTTCCCTTEEEESCTTSSCBCCTTCTTC
T ss_pred eeccCCCCC-CCCCCCEEEEEECCCCCCCCCCCceeEEEEEEEcCHHHhhhhccCCCCCCeEEeccCCCCCccCCCCccc
Confidence 677888643 467899999999975422 12233333322222111100 11122344442 3578999999
Q ss_pred eeeCCCccEEEEeeccc
Q 016647 282 PLLDSSGSLIGINTAIY 298 (385)
Q Consensus 282 Plvn~~G~VVGI~s~~~ 298 (385)
||+. +|+++||++++.
T Consensus 179 PL~~-~~~l~Gi~S~g~ 194 (222)
T 1hj8_A 179 PVVC-NGELQGVVSWGY 194 (222)
T ss_dssp EEEE-TTEEEEEEEECS
T ss_pred ceEE-CCEEEEEEeecC
Confidence 9995 689999999864
No 52
>3h7t_A Group 3 allergen smipp-S YVT004A06; hydrolase; 2.00A {Sarcoptes scabiei type hominis}
Probab=99.39 E-value=3.9e-12 Score=116.17 Aligned_cols=146 Identities=18% Similarity=0.241 Sum_probs=92.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCC--CCeEEEEecCC------CeEeeEEEEEC------CCCCeEEEEEcCCCC----C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFADQ------SAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~dg------~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (385)
...|+|.+|+++ ||||+|||+.+ ...+.|.+... ..+..+.+..+ ..+|||||+++.+.. .
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~h~y~~~~~~~DiAll~L~~~v~~~~~~ 101 (235)
T 3h7t_A 23 KPFCGGSILTAN-FVITAAQCVDGTKPSDISIHYGSSYRTTKGTSVMAKKIYIVRYHPLTMQNNYAVIETEMPIKLDDKT 101 (235)
T ss_dssp SCCEEEEESSSS-EEEECHHHHTTCCGGGEEEEESCSBSSSSSEEEEEEEEEECSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred CceEeEEEeeCC-EEEECHHHCCCCCCCeeEEEcCccccccCCceeeeeeEEeeecCCCCCCCCeEEEEeccccccCCcc
Confidence 346999999987 99999999964 34677777532 23444433332 346999999987652 5
Q ss_pred CcceecCCCC-CCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-C-----CCcccEEEE-----cccc
Q 016647 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-G-----RPIQDVIQT-----DAAI 274 (385)
Q Consensus 213 ~~~l~l~~~~-~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~-----~~~~~~i~~-----d~~i 274 (385)
+.++.|.... .+..|+.+++.||..... .......+.-+....+.... . ......+.. ....
T Consensus 102 v~pi~Lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~~~~~~ 181 (235)
T 3h7t_A 102 TKKIELPSLLYDPEPDTSVLVSGWGSTNFKSLEYSGDLMEANFTVVDRKSCEEQYKQIEADKYIYDGVFCAGGEYDETYI 181 (235)
T ss_dssp CCCCBCCCTTCCCCTTCEEEEEECCCSSTTCCCCCSBCEEEEEEEECHHHHHHHHHTTTCGGGCSTTEEEECBTTTTBBC
T ss_pred ccceecCccccCCCCCCeEEEEecCCCCCCCCchhHHHhhCCCceeCHHHHHHHhhhcccCccccCCeEecCCCCCCCcc
Confidence 6677776443 267899999999974321 22333333322222111000 0 012234444 3457
Q ss_pred CCCCCCceeeCCCccEEEEeeccc
Q 016647 275 NPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 275 ~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
|.|+|||||+. +|+++||++++.
T Consensus 182 C~GDsGgPl~~-~~~l~Gi~S~g~ 204 (235)
T 3h7t_A 182 GYGDAGDPAVQ-NGTLVGVASYIS 204 (235)
T ss_dssp CTTCTTCEEEE-TTEEEEEECCCT
T ss_pred ccCCCCCceee-CCeEEEEEEecC
Confidence 89999999996 788999999864
No 53
>1iau_A Granzyme B; hydrolase-hydrolase inhibitor complex; HET: ASJ NAG FUC MAN BMA; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1fq3_A* 1fi8_A 3tk9_A 3tju_A 3tjv_A
Probab=99.39 E-value=7.6e-12 Score=114.23 Aligned_cols=142 Identities=19% Similarity=0.187 Sum_probs=90.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+.+ .+.|.+.. .+.+..+-+..++ .+||||||++.+. ..
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1iau_A 27 KRCGGFLIRDD-FVLTAAHCWGS--SINVTLGAHNIKEQEPTQQFIPVKRPIPHPAYNPKNFSNDIMLLQLERKAKRTRA 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred eEEEEEEEcCC-EEEECHHhCCC--ceEEEEccccccCCCCccEEEEEEEEECCCCCCCCCCCCCeEEEEECCcccCCCc
Confidence 47999999987 99999999975 46666643 2234455444443 4599999998764 24
Q ss_pred CcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCC-C-CCcccEEEEc-----cccCCCCC
Q 016647 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-G-RPIQDVIQTD-----AAINPGNS 279 (385)
Q Consensus 213 ~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~-~~~~~~i~~d-----~~i~~G~S 279 (385)
+.|+.|.... .+..|+.+++.||..... .......+.-+....+.... . ......+... ...|.|+|
T Consensus 104 v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 183 (227)
T 1iau_A 104 VQPLRLPSNKAQVKPGQTCSVAGWGQTAPLGKHSHTLQEVKMTVQEDRKCESDLRHYYDSTIELCVGDPEIKKTSFKGDS 183 (227)
T ss_dssp BCCCCCCCTTCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHTTTTCCTTTEEEESCTTSCCBCCTTCT
T ss_pred eecccCCCCCCCCCCCCEEEEEEcccCCCCCCcCceeeEeeeeeechHHhhhHhccccCCCcEEEeECCCCCCeeeecCC
Confidence 6677776443 257899999999974321 12233333322222111100 0 0111244442 35788999
Q ss_pred CceeeCCCccEEEEeecc
Q 016647 280 GGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 280 GGPlvn~~G~VVGI~s~~ 297 (385)
||||+. +|.++||++++
T Consensus 184 GgPL~~-~~~l~Gi~S~g 200 (227)
T 1iau_A 184 GGPLVC-NKVAQGIVSYG 200 (227)
T ss_dssp TSEEEE-TTEEEEEEEEE
T ss_pred CchheE-eeEEEEEEeEe
Confidence 999996 67999999987
No 54
>1bru_P Elastase, PPE; serine protease, hydrolase; HET: 1NB; 2.30A {Sus scrofa} SCOP: b.47.1.2
Probab=99.39 E-value=2.6e-11 Score=111.78 Aligned_cols=146 Identities=23% Similarity=0.245 Sum_probs=93.6
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC-------C--CCeEEEEEcCCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ-------D--KDVAVLRIDAPK--- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~-------~--~DlAlLkv~~~~--- 210 (385)
..|.|.+|+++ ||||+|||+.....+.|.+... ..+..+-+..++ . +||||||++.+.
T Consensus 28 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (241)
T 1bru_P 28 HTCGGTLVDQS-WVLTAAHCISSSRTYRVVLGRHSLSTNEPGSLAVKVSKLVVHQDWNSNQLSNGNDIALLKLASPVSLT 106 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTTSCEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCC
T ss_pred eEEEeEEeeCC-EEEEcHHhcccCCceEEEEEcccccCCCCccEEEEEEEEEECCCCCCCCCCCCCcEEEEEeCCCcccC
Confidence 47999999987 9999999998656788887532 234454444443 2 799999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc----cccCCC
Q 016647 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD----AAINPG 277 (385)
Q Consensus 211 ~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d----~~i~~G 277 (385)
+.+.|+.|.... .+..|+.+++.||..... .......+.-+....+... .. ......+... ...|.|
T Consensus 107 ~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (241)
T 1bru_P 107 DKIQLGCLPAAGTILPNNYVCYVTGWGRLQTNGASPDILQQGQLLVVDYATCSKPGWWGSTVKTNMICAGGDGIISSCNG 186 (241)
T ss_dssp SSCCCCBCCCTTCCCCTTCEEEEEESCCSSTTSCCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEECCSSSSBCCTT
T ss_pred CccCCcccCCCcCCCCCCCEEEEEEccccCCCCCCCccceeCEEEEecHHHhCcccccCCcCCCceEeecCCCCCccCCC
Confidence 246677776543 356799999999974321 1233333333332222211 00 1112344442 356899
Q ss_pred CCCceeeCC--Cc--cEEEEeeccc
Q 016647 278 NSGGPLLDS--SG--SLIGINTAIY 298 (385)
Q Consensus 278 ~SGGPlvn~--~G--~VVGI~s~~~ 298 (385)
+|||||+.. +| .++||++++.
T Consensus 187 DSGgPL~~~~~~g~~~l~Gi~S~g~ 211 (241)
T 1bru_P 187 DSGGPLNCQGANGQWQVHGIVSFGS 211 (241)
T ss_dssp CTTCEEEEECTTSCEEEEEEEEECB
T ss_pred CCCCcEEEECCCCCEEEEEEEEEcC
Confidence 999999842 56 7999999864
No 55
>1elt_A Elastase; serine proteinase; 1.61A {Salmo salar} SCOP: b.47.1.2
Probab=99.38 E-value=1.2e-11 Score=113.51 Aligned_cols=146 Identities=18% Similarity=0.242 Sum_probs=93.6
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC---------CCCeEEEEEcCCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (385)
..|+|.+|+++ ||||+|||+.+...+.|.+... +.+..+-+..++ .+||||||++.+.
T Consensus 28 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DiALl~L~~~~~~~ 106 (236)
T 1elt_A 28 HTCGGSLIRQG-WVMTAAHCVDSARTWRVVLGEHNLNTNEGKEQIMTVNSVFIHSGWNSDDVAGGYDIALLRLNTQASLN 106 (236)
T ss_dssp EEEEEEEEETT-EEEECHHHHSSCCCEEEEESCSBTTSCCSCCEEECEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCS
T ss_pred eEEEEEEEeCC-EEEECHHhhCCcCceEEEEccccCCCCCCCcEEEEEEEEEECCCCCCCCCCCCccEEEEECCCCCccC
Confidence 47999999987 9999999998877888887542 234444444443 5699999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc---cccCCCC
Q 016647 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD---AAINPGN 278 (385)
Q Consensus 211 ~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d---~~i~~G~ 278 (385)
..+.|+.|.... .+..|+.++++||..... .......+..+....+... .+ ......+... ...|.|+
T Consensus 107 ~~v~picL~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~GD 186 (236)
T 1elt_A 107 SAVQLAALPPSNQILPNNNPCYITGWGKTSTGGPLSDSLKQAWLPSVDHATCSSSGWWGSTVKTTMVCAGGGANSGCNGD 186 (236)
T ss_dssp SSCCCCCCCCTTCCCCTTCCEEEEESCCSSTTCCCCSBCEEEECCEECHHHHTSTTTTGGGSCTTEEEECCSSCBCCTTC
T ss_pred CcEEeccCCCccccCCCCCEEEEEeCCCcCCCCCcChhheEeEeeecCHHHhccccccCCcCCcceEEecCCCCccCCCC
Confidence 246677776543 356799999999975422 1222332222222222111 00 1112344432 4568999
Q ss_pred CCceeeCC-Cc--cEEEEeeccc
Q 016647 279 SGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 279 SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
|||||+-. +| .++||++++.
T Consensus 187 SGgPL~~~~~g~~~l~Gi~S~g~ 209 (236)
T 1elt_A 187 SGGPLNCQVNGSYYVHGVTSFVS 209 (236)
T ss_dssp TTCEEEEEETTEEEEEEEEEECC
T ss_pred CCCeeEEEECCEEEEEEEEEEeC
Confidence 99999853 56 8999999863
No 56
>2aiq_A Protein C activator; snake venom serine proteinase, hydrolas; HET: NAG NDG; 1.54A {Agkistrodon contortrix contortrix} PDB: 2aip_A*
Probab=99.38 E-value=8.8e-12 Score=114.16 Aligned_cols=141 Identities=21% Similarity=0.271 Sum_probs=87.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC----------CeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ----------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg----------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
..|+|.+|+++ ||||+|||+.+. +.|.+... +.+..+.+..++ .+||||||++.+. .
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~~--~~v~~G~~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIALl~L~~~v~~~~ 99 (231)
T 2aiq_A 23 SLCGGTLINQE-WVLTARHCDRGN--MRIYLGMHNLKVLNKDALRRFPKEKYFCLNTRNDTIWDKDIMLIRLNRPVRNSA 99 (231)
T ss_dssp EEEEEEECSSS-EEEECGGGCCSS--CEEEESCSCTTSCCTTCEEECEEEEECCSSCCSSSTTTTCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeCC-EEEEcHHcCCCC--CEEEEecccccccCCCceEEEEEEEEEECCCCCCCCCCCCEEEEEecCCCCCCC
Confidence 46999999987 999999999863 44554321 123333333332 4599999998764 2
Q ss_pred CCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCCCCCcccEEEEc-----cccCCCCCC
Q 016647 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATGRPIQDVIQTD-----AAINPGNSG 280 (385)
Q Consensus 212 ~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d-----~~i~~G~SG 280 (385)
.+.|+.|... ....|+.++++||..... .......+.-+....+...........+... ...|.|+||
T Consensus 100 ~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 178 (231)
T 2aiq_A 100 HIAPLSLPSN-PPSVGSVCRIMGWGTITSPNATLPDVPHCANINILDYAVCQAAYKGLAATTLCAGILEGGKDTCKGDSG 178 (231)
T ss_dssp TBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCSSEEEEECTTCSCBCCTTCTT
T ss_pred cEEeeECCCC-CCCCCCEEEEEeCCccCCCCCccCchhhhccceecchhhhhhhhcCCCcCcEEeccCCCCCcccCCcCC
Confidence 4567788644 346799999999975321 1223333332222222110111122334432 357899999
Q ss_pred ceeeCCCccEEEEeecc
Q 016647 281 GPLLDSSGSLIGINTAI 297 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~ 297 (385)
|||+. +|+++||++++
T Consensus 179 gPL~~-~~~l~Gi~S~g 194 (231)
T 2aiq_A 179 GPLIC-NGQFQGILSVG 194 (231)
T ss_dssp CEEEE-TTEEEEEEEEE
T ss_pred CcEEE-CCEEEEEEEEe
Confidence 99996 68999999986
No 57
>1p3c_A Glutamyl-endopeptidase; serine protease, hydrolase; 1.50A {Bacillus intermedius} SCOP: b.47.1.1 PDB: 1p3e_A
Probab=99.38 E-value=2e-12 Score=116.98 Aligned_cols=137 Identities=19% Similarity=0.221 Sum_probs=87.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeE----EEEecCC------CeEeeEEEEEC--------CCCCeEEEEEcCCC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDI----RVTFADQ------SAYDAKIVGFD--------QDKDVAVLRIDAPK 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i----~V~~~dg------~~~~a~vv~~d--------~~~DlAlLkv~~~~ 210 (385)
...|+|++|+++ +|||+|||+.+. ..+ .|.+... ..+..+.+..+ ..+||||||++.+.
T Consensus 29 ~~~CgGtLIs~~-~VLTAAHCv~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiAll~L~~~~ 107 (215)
T 1p3c_A 29 GSSCTGTLIAPN-KILTNGHCVYNTASRSYSAKGSVYPGMNDSTAVNGSANMTEFYVPSGYINTGASQYDFAVIKTDTNI 107 (215)
T ss_dssp SCEEEEEEEETT-EEEECHHHHEETTTTEECCCCEEEETCBTTBCTTCCEEEEEEECCHHHHHHCCGGGCCEEEEESSCH
T ss_pred CceEEEEEEeCC-EEEECccEeccCCCCccccceEEEEcccCCCCCCCeEEEEEEEeCCccccCCCcccCEEEEEECCCC
Confidence 357999999987 999999999653 334 6666432 23445544433 35699999998742
Q ss_pred -CCCcceecCCCCCCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeC
Q 016647 211 -DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD 285 (385)
Q Consensus 211 -~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn 285 (385)
..+.++.|... ....|+.++++||+.... .......+..+... . ......+...|.|+|||||+.
T Consensus 108 ~~~v~pi~l~~~-~~~~g~~~~~~Gwg~~~~~~~~~~l~~~~~~~~~~~-----~----c~~~~~~~~~C~GDSGgPl~~ 177 (215)
T 1p3c_A 108 GNTVGYRSIRQV-TNLTGTTIKISGYPGDKMRSTGKVSQWEMSGSVTRE-----D----TNLAYYTIDTFSGNSGSAMLD 177 (215)
T ss_dssp HHHHCCCCBCCC-SCCTTCEEEEEECCHHHHHHHSSCCCEEEEEECCEE-----C----SSEEEECCCCCTTCTTCEEEC
T ss_pred cccceeeecCCC-cccCCCeEEEecCCCCCcccccceechhccCccCcc-----c----chheeeccccCCCCCCCeeEc
Confidence 13567777643 357899999999973211 11111111111111 1 111223567899999999998
Q ss_pred CCccEEEEeeccc
Q 016647 286 SSGSLIGINTAIY 298 (385)
Q Consensus 286 ~~G~VVGI~s~~~ 298 (385)
.+|.++||++++.
T Consensus 178 ~~g~lvGi~S~g~ 190 (215)
T 1p3c_A 178 QNQQIVGVHNAGY 190 (215)
T ss_dssp TTSCEEEECCEEE
T ss_pred cCCeEEEEEeccc
Confidence 7899999998764
No 58
>1orf_A Granzyme A; hydrolase-hydrolase inhibitor complex; HET: 0G6; 2.40A {Homo sapiens} SCOP: b.47.1.2 PDB: 1op8_A
Probab=99.38 E-value=1.9e-11 Score=112.04 Aligned_cols=145 Identities=16% Similarity=0.140 Sum_probs=92.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
...|+|.+|+++ ||||+|||+.+ ..+.|.+... +.+..+-+..++ .+|||||+++.+. +
T Consensus 23 ~~~CgGtLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 100 (234)
T 1orf_A 23 KTICAGALIAKD-WVLTAAHCNLN-KRSQVILGAHSITREEPTKQIMLVKKEFPYPCYDPATREGDLKLLQLTEKAKINK 100 (234)
T ss_dssp SCEEEEEEEETT-EEEECTTCCCC-TTCEEEESCSBSSSCCTTCEEECEEEEEECTTCCTTTCTTCCEEEEESSCCCCSS
T ss_pred ceEEEEEEeeCC-EEEEchhcCCC-CCceEEEeccccCcCCCceEEEEEEEEEcCCCCCCCCCCCCEEEEEECCcCccCC
Confidence 347999999987 99999999975 4456666431 234444444443 4699999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCCCC-Ccc----cEEEEc-----cccC
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATGR-PIQ----DVIQTD-----AAIN 275 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~~-~~~----~~i~~d-----~~i~ 275 (385)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+...... ... ..+... ...|
T Consensus 101 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~~C 180 (234)
T 1orf_A 101 YVTILHLPKKGDDVKPGTMCQVAGWGRTHNSASWSDTLREVEITIIDRKVCNDRNHYNFNPVIGMNMVCAGSLRGGRDSC 180 (234)
T ss_dssp SSCCCCCCSSCCCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEEECHHHHTSTTTTTTTTCCCTTEEEEECSSCCCBCC
T ss_pred CeeeeecCCCcCCCCCCCEEEEEECCcCCCCCCccccceEeEEEeeCHHHcCCccccccCCccCCCEEEecCCCCCCcCC
Confidence 45677776443 357899999999974321 2233334433333322210000 011 344442 3578
Q ss_pred CCCCCceeeCCCccEEEEeeccc
Q 016647 276 PGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
.|+|||||+. +|.++||++++.
T Consensus 181 ~GDSGgPL~~-~~~l~GI~S~g~ 202 (234)
T 1orf_A 181 NGDSGSPLLC-EGVFRGVTSFGL 202 (234)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECC
T ss_pred CCCCCCeEEE-CCEEEEEEEEcC
Confidence 9999999995 689999999864
No 59
>1si5_H Scatter factor, hepatocyte growth factor, SF, hepatopoeitin A, LUNG; chymotrypsin homology, hormone/growth factor complex; 2.53A {Homo sapiens} SCOP: b.47.1.2 PDB: 1shy_A
Probab=99.38 E-value=2.9e-11 Score=111.30 Aligned_cols=147 Identities=13% Similarity=0.135 Sum_probs=92.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecCC-----------CeEeeEEEEECC-CCCeEEEEEcCCC---CCC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ-----------SAYDAKIVGFDQ-DKDVAVLRIDAPK---DKL 213 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg-----------~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~ 213 (385)
...|+|.+|+++ ||||+|||+.+. ..+.|.+... +.+..+-+.+++ .+|||||+++.+. ..+
T Consensus 22 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~~~~~p~~~DiALl~L~~~v~~~~~v 100 (240)
T 1si5_H 22 KHICGGSLIKES-WVLTARQCFPSRDLKDYEAWLGIHDVHGRGDEKCKQVLNVSQLVYGPEGSDLVLMKLARPAVLDDFV 100 (240)
T ss_dssp SEEEEEEEEETT-EEEEEGGGCSSSCGGGEEEEESCSBSSCSTTTTTCEEEEEEEEEECSSTTCEEEEEESSCCCCSSSC
T ss_pred CeEEEEEEeeCC-EEEEhHHhcCCCCCccEEEEEeeeecCCCCCCCcceEEEEEEEEcCCCCCcEEEEEECCccccCCce
Confidence 357999999987 999999999754 4677777431 223444344554 6899999998764 246
Q ss_pred cceecCCC-CCCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCCCC---CcccEEEE-----ccccCCCCCC
Q 016647 214 RPIPIGVS-ADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATGR---PIQDVIQT-----DAAINPGNSG 280 (385)
Q Consensus 214 ~~l~l~~~-~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~~---~~~~~i~~-----d~~i~~G~SG 280 (385)
.++.|... ..+..|+.++++||..... .......+.-+....+...... .....+.. ....|.|+||
T Consensus 101 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 180 (240)
T 1si5_H 101 STIDLPNYGSTIPEKTSCSVYGWGYTGLINYDGLLRVAHLYIMGNEKCSQHHRGKVTLNESEICAGAEKIGSGPCEGDYG 180 (240)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESSCCCCSSCCCBCEEEEEEEECGGGTCC-------CCTTEEEEECSSSCCBCCTTCTT
T ss_pred eccCcCCcCCCCCCCCEEEEEEeCCCCCCCCCCeeEEEEEeecCHHHhhhhhcCCccCCCCEEeecCCCCCCEeccCCCC
Confidence 67777653 2466899999999975432 2233333332222222111100 11233443 2457889999
Q ss_pred ceeeCCCc---cEEEEeeccc
Q 016647 281 GPLLDSSG---SLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~~G---~VVGI~s~~~ 298 (385)
|||+..++ .++||++++.
T Consensus 181 gPL~~~~~~~~~l~Gi~S~g~ 201 (240)
T 1si5_H 181 GPLVCEQHKMRMVLGVIVPGR 201 (240)
T ss_dssp CEEEEECSSSEEEEEEECSCS
T ss_pred CcEEEEECCcEEEEEEEEECC
Confidence 99985332 7999999764
No 60
>1m9u_A Earthworm fibrinolytic enzyme; hydrolase, serine protease (elastase-like); 2.30A {Eisenia fetida} SCOP: b.47.1.2
Probab=99.37 E-value=9.3e-12 Score=114.52 Aligned_cols=144 Identities=17% Similarity=0.255 Sum_probs=92.0
Q ss_pred eEEEEEEEcCCCEEEecccccCC--CCeEEEEecC--------CCeEeeEEEEECCC---------CCeEEEEEcCCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFAD--------QSAYDAKIVGFDQD---------KDVAVLRIDAPK-- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~d--------g~~~~a~vv~~d~~---------~DlAlLkv~~~~-- 210 (385)
..|+|.+|+++ ||||+|||+.+ ...+.|.+.. ++.+..+.+..++. +|||||+++.+.
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~v~~ 105 (241)
T 1m9u_A 27 HSCGASLLSST-SALSASHCVDGVLPNNIRVIAGLWQQSDTSGTQTANVDSYTMHENYGAGTASYSNDIAILHLATSISL 105 (241)
T ss_dssp EEEEEEECSSS-EEEECHHHHTTCCGGGEEEEESCSBTTCCTTCEEEEEEEEEECTTTTCSSSTTTTCCEEEEESSCCCC
T ss_pred eeeEEEEEeCC-EEEecHHhCCCCCcceEEEEEEeecCCCCCCceEEEEEEEEeCCCcCCCCCcccccEEEEEecCcccc
Confidence 47999999987 99999999976 4567787742 23455555555544 399999998764
Q ss_pred -CCCcceecCCC-CCCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccC--CC-CC--CcccEEEEc-----cc
Q 016647 211 -DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA--AT-GR--PIQDVIQTD-----AA 273 (385)
Q Consensus 211 -~~~~~l~l~~~-~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~--~~-~~--~~~~~i~~d-----~~ 273 (385)
..+.|+.|... .....|+.+++.||..... .......+.-+....+.. .. .. .....+... ..
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~Ca~~~~~~~~ 185 (241)
T 1m9u_A 106 GGNIQAAVLPANNNNDYAGTTCVISGWGRTDGTNNLPDILQKSSIPVITTAQCTAAMVGVGGANIWDNHICVQDPAGNTG 185 (241)
T ss_dssp CSSCCCCCCCSCSSCCCTTCEEEEEESSCSSSSSCCCSBCEEEEEEBCCHHHHHHHHTTSTTCCCCTTEEEECCTTSCCB
T ss_pred CCCccccCcCCCcCCCCCCCEEEEEeCcccCCCCCcccceeEeeEEEEcHHHhhhhhcccCCCcccCCcEEECcCCCCCe
Confidence 24677777654 2233899999999974432 223333333222221211 00 11 123344442 35
Q ss_pred cCCCCCCceeeCCCc--cEEEEeec
Q 016647 274 INPGNSGGPLLDSSG--SLIGINTA 296 (385)
Q Consensus 274 i~~G~SGGPlvn~~G--~VVGI~s~ 296 (385)
.|.|+|||||+..+| .++||+++
T Consensus 186 ~C~GDSGgPL~~~~~~~~l~Gi~S~ 210 (241)
T 1m9u_A 186 ACNGDSGGPLNCPDGGTRVVGVTSW 210 (241)
T ss_dssp CCTTCTTCEEEEESSSEEEEEEEEE
T ss_pred eecCcCCccEEEeCCCEEEEEEEEE
Confidence 789999999985435 89999998
No 61
>1gvk_B Elastase 1, peptide inhibitor; hydrolase, serine protease, catalytic intermediate, atomic resolution, hydrolase-hydrolase inhibitor complex; 0.94A {Sus scrofa} SCOP: b.47.1.2 PDB: 1bma_A* 1b0e_A* 1e34_B* 1e35_B* 1e36_B* 1e37_B* 1e38_B* 1eas_A* 1eat_A* 1eau_A* 1ela_A* 1elb_A* 1elc_A* 1eld_E* 1ele_E* 1elf_A* 1elg_A* 1esa_A 1esb_A* 1est_A* ...
Probab=99.36 E-value=1.6e-11 Score=113.06 Aligned_cols=146 Identities=18% Similarity=0.239 Sum_probs=93.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC---------CCCeEEEEEcCCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (385)
..|+|.+|+++ ||||+|||+.+...+.|.+... +.+..+-+..++ .+|||||+++.+.
T Consensus 28 ~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~~~ 106 (240)
T 1gvk_B 28 HTCGGTLIRQN-WVMTAAHCVDRELTFRVVVGEHNLNQNNGTEQYVGVQKIVVHPYWNTDDVAAGYDIALLRLAQSVTLN 106 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCCCEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTCGGGCCCCEEEEESSCCCCB
T ss_pred ceEEEEEeeCC-EEEECHHHCCCCcceEEEECCeecccCCCcceEEEEEEEEECCCCCCCCCCCCCcEEEEEECCccccC
Confidence 47999999987 9999999998877888887432 234444444443 5699999998764
Q ss_pred CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc----cccCCC
Q 016647 211 DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD----AAINPG 277 (385)
Q Consensus 211 ~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d----~~i~~G 277 (385)
..+.|+.|.... .+..|+.+++.||..... .......+.-+....+... .+ ......+... ...|.|
T Consensus 107 ~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~G 186 (240)
T 1gvk_B 107 SYVQLGVLPRAGTILANNSPCYITGWGLTRTNGQLAQTLQQAYLPTVDYAICSSSSYWGSTVKNSMVCAGGDGVRSGCQG 186 (240)
T ss_dssp TTBCCCCCCCTTCCCCTTCCEEEEESCBSSTTCCBCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCBCCTT
T ss_pred CCccceecCCCCCCCCCCCEEEEEecCcCCCCCCcchhccEEEEEEEcHHHhccccccCccCCcceEeecCCCCCcccCC
Confidence 245677776443 356799999999974322 1222222222222222111 00 1112344442 356899
Q ss_pred CCCceeeC-CCc--cEEEEeeccc
Q 016647 278 NSGGPLLD-SSG--SLIGINTAIY 298 (385)
Q Consensus 278 ~SGGPlvn-~~G--~VVGI~s~~~ 298 (385)
+|||||+- .+| .++||++++.
T Consensus 187 DSGgPL~~~~~g~~~l~Gi~S~g~ 210 (240)
T 1gvk_B 187 DSGGPLHCLVNGQYAVHGVTSFVS 210 (240)
T ss_dssp CTTCEEEEEETTEEEEEEEEEECB
T ss_pred CCcCceEEEECCcEEEEEEEEEeC
Confidence 99999984 356 8999999863
No 62
>3rp2_A RAT MAST cell protease II; serine proteinase; 1.90A {Rattus rattus} SCOP: b.47.1.2
Probab=99.36 E-value=3.8e-11 Score=109.00 Aligned_cols=160 Identities=17% Similarity=0.179 Sum_probs=97.6
Q ss_pred CCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEEC
Q 016647 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFD 196 (385)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d 196 (385)
-|-+|.|....... ....|+|.+|+++ ||||+|||+.. .+.|.+... +.+..+.+..+
T Consensus 12 ~Pw~v~l~~~~~~~----------~~~~CgGtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~h 78 (224)
T 3rp2_A 12 RPYMAHLDIVTEKG----------LRVICGGFLISRQ-FVLTAAHCKGR--EITVILGAHDVRKRESTQQKIKVEKQIIH 78 (224)
T ss_dssp CTTEEEEEEECTTS----------CEEEEEEEESSSS-EEEECGGGCCS--EEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred CCcEEEEEEecCCC----------cEEEEEeEEeeCC-EEEEchhcCCC--CcEEEEeccccCcCCCCcEEEEEEEEEEC
Confidence 46677776532111 1347999999987 99999999854 566666421 23445555555
Q ss_pred CC-------CCeEEEEEcCCC---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCC
Q 016647 197 QD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT 260 (385)
Q Consensus 197 ~~-------~DlAlLkv~~~~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~ 260 (385)
+. +|||||+++.+. ..+.++.|.... .+..|+.+++.||..... .......+.-+....+....
T Consensus 79 p~y~~~~~~~DIALl~L~~~~~~~~~v~pi~l~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 158 (224)
T 3rp2_A 79 ESYNSVPNLHDIMLLKLEKKVELTPAVNVVPLPSPSDFIHPGAMCWAAGWGKTGVRDPTSYTLREVELRIMDEKACVDYR 158 (224)
T ss_dssp TTCCSSSCCSCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSEEETTEEECSBCEEEEEEEECGGGTTTTT
T ss_pred CCccCCCCCccEEEEEcCCCcccCCcccceecCCcccCCCCCCEEEEEeCCCCCCCCCCCceeeEeeeeecChHHhcccc
Confidence 43 699999998764 245667775433 357899999999964321 12222333322222221111
Q ss_pred CCCcccEEEEc-----cccCCCCCCceeeCCCccEEEEeecccC
Q 016647 261 GRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIYS 299 (385)
Q Consensus 261 ~~~~~~~i~~d-----~~i~~G~SGGPlvn~~G~VVGI~s~~~~ 299 (385)
.......+... ...|.|+|||||+. ++.++||++++..
T Consensus 159 ~~~~~~~~Ca~~~~~~~~~C~GDsGgPl~~-~~~l~Gi~S~g~~ 201 (224)
T 3rp2_A 159 YYEYKFQVCVGSPTTLRAAFMGDSGGPLLC-AGVAHGIVSYGHP 201 (224)
T ss_dssp CCCTTTEEEECCTTSCCBCCTTTTTCEEEE-TTEEEEEEEECCT
T ss_pred ccCcCCEEEecCCCCCCeeccCCCCCeEEE-cceeeEEEEECCC
Confidence 11122334432 35678999999995 6799999998643
No 63
>2bdg_A Kallikrein-4; serine proteinase, S1 subsite, 70-80 loop, structural proteo europe, spine, structural genomics, hydrolase; HET: PBZ; 1.95A {Homo sapiens} PDB: 2bdh_A* 2bdi_A*
Probab=99.36 E-value=1.2e-11 Score=112.65 Aligned_cols=143 Identities=18% Similarity=0.216 Sum_probs=90.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC----------CCeEeeEEEEECC-------CCCeEEEEEcCCC---
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (385)
...|+|.+|+++ ||||+|||+.+ .+.|.+.. .+.+..+.+..++ .+||||||++.+.
T Consensus 23 ~~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~g~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~v~~~ 99 (223)
T 2bdg_A 23 ELFCSGVLVHPQ-WVLSAAHCFQN--SYTIGLGLHSLEADQEPGSQMVEASLSVRHPEYNRPLLANDLMLIKLDESVSES 99 (223)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBSCGGGCTTCEEEEEEEEEECTTTTSSTTCSCCEEEEESSCCCCC
T ss_pred CEEEEEEEecCC-EEEEhHHhCCC--CeEEEEeeeecCCCCCCCcEEEEEEEEEeCCCCCCCCCcCcEEEEEECCcccCC
Confidence 357999999987 99999999975 45555532 1234444444443 4699999998764
Q ss_pred CCCcceecCCCCCCCCCCEEEEEeCCCCCCC----ceEEeEEeeeeeeeccCC-CCCCcccEEEEc-----cccCCCCCC
Q 016647 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAA-TGRPIQDVIQTD-----AAINPGNSG 280 (385)
Q Consensus 211 ~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-----~~i~~G~SG 280 (385)
..+.|+.|... .+..|+.+++.||...... ......+.-+....+... ........+... ...|.|+||
T Consensus 100 ~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 178 (223)
T 2bdg_A 100 DTIRSISIASQ-CPTAGNSCLVSGWGLLANGRMPTVLQCVNVSVVSEEVCSKLYDPLYHPSMFCAGGGQDQKDSCNGDSG 178 (223)
T ss_dssp SSCCCCCBCSS-CCCTTCEEEEEESCCCTTSCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCCBCCTTCTT
T ss_pred CceecccCCCC-CCCCCCEEEEEeCcccCCCCCCCcceEEEEEEeCHHHhhhhhCCCCCCCeEeccCCCCCCCcCCCCCC
Confidence 24667778643 4678999999999754321 222333332222211110 011123345442 357899999
Q ss_pred ceeeCCCccEEEEeeccc
Q 016647 281 GPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~~ 298 (385)
|||+. +|.++||++++.
T Consensus 179 gPL~~-~~~l~Gi~S~g~ 195 (223)
T 2bdg_A 179 GPLIC-NGYLQGLVSFGK 195 (223)
T ss_dssp CEEEE-TTEEEEEEEECC
T ss_pred chheE-ccEEEEEEEecC
Confidence 99995 679999999864
No 64
>1ton_A Tonin; hydrolase(serine proteinase); 1.80A {Rattus rattus} SCOP: b.47.1.2
Probab=99.36 E-value=2e-11 Score=111.87 Aligned_cols=141 Identities=21% Similarity=0.228 Sum_probs=89.6
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC------------------CCCeEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ------------------DKDVAVL 204 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~------------------~~DlAlL 204 (385)
..|+|.+|+++ ||||+|||+. ..+.|.+... ..+..+-+..++ .+|||||
T Consensus 22 ~~CgGsLIs~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 98 (235)
T 1ton_A 22 YLCGGVLIDPS-WVITAAHCYS--NNYQVLLGRNNLFKDEPFAQRRLVRQSFRHPDYIPLIVTNDTEQPVHDHSNDLMLL 98 (235)
T ss_dssp SEEEEEEEETT-EEEECGGGCC--SCCEEEESCSBTTSCCTTCEEECEEEEEECTTCCCC--------CCCCSTTCCEEE
T ss_pred CeEEEEEecCC-EEEEcHHhCC--CCcEEEeCcccccCCCCcceEEEEEEEEeCCCCcccccccccccccCCCcCCEEEE
Confidence 37999999987 9999999995 4556665431 223333333332 3599999
Q ss_pred EEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCCC-CCcccEEEEc---
Q 016647 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATG-RPIQDVIQTD--- 271 (385)
Q Consensus 205 kv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d--- 271 (385)
+++.+. ..+.|+.|... .+..|+.+++.||..... .......+.-+....+..... ......+...
T Consensus 99 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 177 (235)
T 1ton_A 99 HLSEPADITGGVKVIDLPTK-EPKVGSTCLASGWGSTNPSEMVVSHDLQCVNIHLLSNEKCIETYKDNVTDVMLCAGEME 177 (235)
T ss_dssp EESSCCCCCSSCCCCCCCCS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECGGGCGGGGSTTGGGGEEEEECTT
T ss_pred EcCCccccCCcceeeeCCCC-CCCCCCEEEEEecCCCCCCCCccCccceEEEEEEeCHHHHHHHhcCcCCCCeEeeccCC
Confidence 998764 24677888654 467899999999975421 122333333332222211111 1122344442
Q ss_pred --cccCCCCCCceeeCCCccEEEEeecc
Q 016647 272 --AAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 272 --~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
...|.|+|||||+. +|.++||++++
T Consensus 178 ~~~~~C~GDSGgPL~~-~~~l~Gi~S~g 204 (235)
T 1ton_A 178 GGKDTCAGDSGGPLIC-DGVLQGITSGG 204 (235)
T ss_dssp CSCBCCTTCTTCEEEE-TTEEEEEECCC
T ss_pred CCCcCCCCCCccccEE-CCEEEEEEeeC
Confidence 35789999999995 78999999976
No 65
>2asu_B Hepatocyte growth factor-like protein; serine proteinase, beta-chain, MSP, HGFL, hydrolase; 1.85A {Homo sapiens}
Probab=99.35 E-value=1.9e-11 Score=112.08 Aligned_cols=147 Identities=14% Similarity=0.138 Sum_probs=92.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----CCeEEEEecCC-----------CeEeeEEEEECC-CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-----------SAYDAKIVGFDQ-DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~dg-----------~~~~a~vv~~d~-~~DlAlLkv~~~~---~ 211 (385)
...|+|.+|+++ ||||+|||+.+ ...+.|.+... +.+..+-+..++ .+|||||+++.+. .
T Consensus 21 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~hp~~~DiALl~L~~~v~~~~ 99 (234)
T 2asu_B 21 QHFCGGSLVKEQ-WILTARQCFSSCHMPLTGYEVWLGTLFQNPQHGEPSLQRVPVAKMVCGPSGSQLVLLKLERSVTLNQ 99 (234)
T ss_dssp CEEEEEEEEETT-EEEEEGGGSSCTTCCCTTCEEEESCSBSSCCTTCTTCEEEEEEEEEECSTTCCEEEEEESSCCCCSS
T ss_pred CEEEEEEEEeCC-EEEECHHHcCCCCCCcccEEEEEeeeeccCCCCCCceEEEEEEEEecCCCCCCeEEEEeCCcCcCCC
Confidence 457999999987 99999999964 34577776431 233444444454 5799999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCC-CCCCcccEEEEc-----cccCCCCCC
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAA-TGRPIQDVIQTD-----AAINPGNSG 280 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-----~~i~~G~SG 280 (385)
.+.|+.|.... .+..|+.++++||..... .......+.-+....+... ........+... ...|.|+||
T Consensus 100 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 179 (234)
T 2asu_B 100 RVALICLPPEWYVVPPGTKCEIAGWGETKGTGNDTVLNVALLNVISNQECNIKHRGRVRESEMCTEGLLAPVGACEGDYG 179 (234)
T ss_dssp SSCCCBCCCTTCCCCTTCEEEEEESSCCTTSSCTTBCEEEEEEEECHHHHHHHTTTCCCTTEEEECCCSSCCBCCTTCTT
T ss_pred cEeccCCCCccccCCCCCEEEEEeCCccCCCCCCccceEEEeeEEcHHHcccccCCccCcceEeecCCCCCCeeccCCCC
Confidence 46777776543 356899999999974432 2233333332222222110 111122344432 357899999
Q ss_pred ceeeCCC-c--cEEEEeeccc
Q 016647 281 GPLLDSS-G--SLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~~-G--~VVGI~s~~~ 298 (385)
|||+..+ | .++||++++.
T Consensus 180 gPL~~~~~~~~~l~Gi~S~g~ 200 (234)
T 2asu_B 180 GPLACFTHNSWVLEGIIIPNR 200 (234)
T ss_dssp CEEEEEETTEEEEEEEECCCS
T ss_pred CceEEEECCeEEEEEEEEcCC
Confidence 9998532 3 7999999764
No 66
>2zgc_A Granzyme M; serine protease, cytolysis, glycoprotein, hydrolase, secrete zymogen; 1.96A {Homo sapiens} PDB: 2zgh_A 2zks_A 2zgj_A
Probab=99.35 E-value=2.6e-11 Score=111.76 Aligned_cols=145 Identities=19% Similarity=0.261 Sum_probs=91.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCCC-eEEEEecCC------CeEeeEEEEEC--------CCCCeEEEEEcCCC---CCC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGAS-DIRVTFADQ------SAYDAKIVGFD--------QDKDVAVLRIDAPK---DKL 213 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~-~i~V~~~dg------~~~~a~vv~~d--------~~~DlAlLkv~~~~---~~~ 213 (385)
..|+|.+|+++ ||||+|||+.+.. .+.|.+... ..+..+-+..+ ..+||||||++.+. ..+
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~~~v 102 (240)
T 2zgc_A 24 HLCGGVLVHPK-WVLTAAHCLAQRMAQLRLVLGLHTLDSPGLTFHIKAAIQHPRYKPVPALENDLALLQLDGKVKPSRTI 102 (240)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSCGGGEEEEESCSBSSSCCEEEEEEEEEECTTCBCTTSCBSCCEEEEESSCCCCCSSC
T ss_pred eEEEEEEEcCC-EEEEcHHhcCCCCCCEEEEecccccCCCCeEEEEEEEEECCCCCCCCCCcccEEEEEeCCcccCCCce
Confidence 47999999987 9999999997653 577776432 23444444333 34699999998764 246
Q ss_pred cceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccC--C-CCCCcccEEEEc-----cccCCCCC
Q 016647 214 RPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA--A-TGRPIQDVIQTD-----AAINPGNS 279 (385)
Q Consensus 214 ~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~--~-~~~~~~~~i~~d-----~~i~~G~S 279 (385)
.|+.|.... .+..|+.+++.||..... .......+.-+....+.. . ........+... ...|.|+|
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDS 182 (240)
T 2zgc_A 103 RPLALPSKRQVVAAGTRCSMAGWGLTHQGGRLSRVLRELDLQVLDTRMCNNSRFWNGSLSPSMVCLAADSKDQAPCKGDS 182 (240)
T ss_dssp CCCCCCCTTCCCCTTCEEEEEECCBSSTTCCBCSBCEEEEEEECCHHHHTSTTTTTTCCCTTEEEEECSSTTCBCCTTCT
T ss_pred eeeEcCCCCCCCCCCCEEEEEECCcccCCCCcCceeeeeeeeecCHHHhCCccccCCCCCCceEeeccCCCCCccCCCCc
Confidence 777776543 357899999999974321 122333333222222211 0 011122344432 35689999
Q ss_pred CceeeCC-CccEEEEeecc
Q 016647 280 GGPLLDS-SGSLIGINTAI 297 (385)
Q Consensus 280 GGPlvn~-~G~VVGI~s~~ 297 (385)
||||+.. +..++||++++
T Consensus 183 GgPL~~~~~~~l~Gi~S~g 201 (240)
T 2zgc_A 183 GGPLVCGKGRVLAGVLSFS 201 (240)
T ss_dssp TCEEEETTTTEEEEEECCC
T ss_pred cCeeEECCCCEEEEEEEEC
Confidence 9999953 23899999986
No 67
>2oq5_A Transmembrane protease, serine 11E; type II trans-membrane serine proteinases, trypsin-like serine protease, tumor marker, hydrolase; 1.61A {Homo sapiens}
Probab=99.35 E-value=4.5e-11 Score=109.34 Aligned_cols=146 Identities=13% Similarity=0.200 Sum_probs=92.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecC-----CCeEeeEEEEECC-------CCCeEEEEEcCCC---CCC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-----QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKL 213 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-----g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~ 213 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. +..+..+.+..++ .+|||||+++.+. ..+
T Consensus 24 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~~~~v~~G~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~~v 102 (232)
T 2oq5_A 24 HRCGATLINAT-WLVSAAHCFTTYKNPARWTASFGVTIKPSKMKRGLRRIIVHEKYKHPSHDYDISLAELSSPVPYTNAV 102 (232)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCCGGGEEEEESSBSTTCSEEEEEEEEEECTTCCTTCCTTCCEEEEESSCCCCCSSS
T ss_pred eeEEEEEEcCC-EEEECHHHcCCCCCCceEEEEEeeEECCCceEEeEEEEEeCCCCCCCCCCCCEEEEEecCCCccCCce
Confidence 47999999987 999999999753 356777642 2334444444443 4699999998764 246
Q ss_pred cceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCC---CCCCcccEEEEc-----cccCCCCC
Q 016647 214 RPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA---TGRPIQDVIQTD-----AAINPGNS 279 (385)
Q Consensus 214 ~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~d-----~~i~~G~S 279 (385)
.|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+... ...|.|+|
T Consensus 103 ~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDs 182 (232)
T 2oq5_A 103 HRVCLPDASYEFQPGDVMFVTGFGALKNDGYSQNHLRQAQVTLIDATTCNEPQAYNDAITPRMLCAGSLEGKTDACQGDS 182 (232)
T ss_dssp CCCBCCCTTCCCCTTCEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECTTCSSBCCTTCT
T ss_pred eEeECCCccccCCCCCEEEEEECCccCCCCCCCceeeEeEEEEeCHHHcCCccccCCccCCCEEeecCCCCCCccCCCCC
Confidence 677776443 356799999999974321 1233333333332222211 011122345442 35789999
Q ss_pred CceeeCC--Cc--cEEEEeeccc
Q 016647 280 GGPLLDS--SG--SLIGINTAIY 298 (385)
Q Consensus 280 GGPlvn~--~G--~VVGI~s~~~ 298 (385)
||||+.. +| .++||++++.
T Consensus 183 GgPL~~~~~~~~~~l~GI~S~g~ 205 (232)
T 2oq5_A 183 GGPLVSSDARDIWYLAGIVSWGD 205 (232)
T ss_dssp TCEEEEECTTSCEEEEEEEEECS
T ss_pred CCcEEEECCCCCEEEEEEEEeCC
Confidence 9999853 23 6999999863
No 68
>2qxi_A Kallikrein-7; S1 pocket, chloromethyl ketone, alternate conformations, alternative splicing, glycoprotein, hydrolase, protease, secreted; HET: K7J; 1.00A {Homo sapiens} PDB: 2qxg_A* 2qxh_A* 2qxj_A* 3bsq_A
Probab=99.34 E-value=1.1e-11 Score=112.95 Aligned_cols=140 Identities=14% Similarity=0.156 Sum_probs=89.0
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecCC-------CeEeeEEEEECC-------CCCeEEEEEcCCC---CCCcc
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKLRP 215 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~~~ 215 (385)
.|+|.+|+++ ||||+|||+. ..+.|.+... +.+..+-+..++ .+|||||+++.+. ..+.|
T Consensus 25 ~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~~v~p 101 (224)
T 2qxi_A 25 HCGGVLVNER-WVLTAAHCKM--NEYTVHLGSDTLGDRRAQRIKASKSFRHPGYSTQTHVNDLMLVKLNSQARLSSMVKK 101 (224)
T ss_dssp EEEEEEEETT-EEEECGGGCC--SCEEEEESCSBTTCTTSEEEEECEEEECTTCCTTTCTTCCEEEECSSCCCCBTTBCC
T ss_pred EEEEEEecCC-EEEEhHHcCC--CCcEEEEeeeecCCCccEEEEEEEEEECCCCCCCCCcCcEEEEEeCCCCcCCCceee
Confidence 7999999987 9999999994 4677776432 234444444443 4699999998764 34677
Q ss_pred eecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEEc-----cccCCCCCCcee
Q 016647 216 IPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQTD-----AAINPGNSGGPL 283 (385)
Q Consensus 216 l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-----~~i~~G~SGGPl 283 (385)
+.|.... ...|+.++++||..... .......+.-+....+... ........+... ...|.|+|||||
T Consensus 102 icL~~~~-~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGgPL 180 (224)
T 2qxi_A 102 VRLPSRC-EPPGTTCTVSGWGTTTSPDVTFPSDLMCVDVKLISPQDCTKVYKDLLENSMLCAGIPDSKKNACNGDSGGPL 180 (224)
T ss_dssp CCCCSSC-CCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECTTCCCBCCTTCTTCEE
T ss_pred EECCCCC-CCCCCEEEEEeCCccCCCCCCCChhheEEEeeecCHHHhhHHhcCcCCCCeEEecCCCCCCccCCCCccccE
Confidence 7886543 57899999999975421 1222222222222111100 001112344432 357899999999
Q ss_pred eCCCccEEEEeecc
Q 016647 284 LDSSGSLIGINTAI 297 (385)
Q Consensus 284 vn~~G~VVGI~s~~ 297 (385)
+. +|+++||++++
T Consensus 181 ~~-~~~l~Gi~S~g 193 (224)
T 2qxi_A 181 VC-RGTLQGLVSWG 193 (224)
T ss_dssp EE-TTEEEEEEEEC
T ss_pred EE-CCEEEEEEEeC
Confidence 95 78999999976
No 69
>3s69_A Thrombin-like enzyme defibrase; beta-barrel, serine enzymes, fibrinogen binding, glycosylati hydrolase; 1.43A {Gloydius saxatilis} PDB: 1op2_A* 1op0_A* 4gso_A 1bqy_A*
Probab=99.34 E-value=2.6e-11 Score=110.80 Aligned_cols=144 Identities=18% Similarity=0.176 Sum_probs=87.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------Ce-EeeEEEEECC-------CCCeEEEEEcCCC---
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SA-YDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~-~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (385)
...|+|.+|+++ ||||+|||+... +.|.+... .. ...+.+..++ .+|||||+++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~ 99 (234)
T 3s69_A 23 GFFCSGTLINEE-WVLTAAHCDNTN--FQMKLGVHSKKVLNEDEQTRNPKEKFICPNKKNDEVLDKDIMLIKLDSRVSNS 99 (234)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCSS--CEEEESCCCSSSCCTTCEEECEEEEEECTTCCTTCTTSSCCEEEEESSCCCCB
T ss_pred CeEEeEEEeeCC-EEEEchhhCCCC--ceEEecccccccccCCcceeeceEEEECCCccCCCCCcccEEEEeeCCcCCCC
Confidence 457999999987 999999999754 34444221 11 1222332232 4699999998764
Q ss_pred CCCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC--CCCcccEEEE-----ccccCCC
Q 016647 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT--GRPIQDVIQT-----DAAINPG 277 (385)
Q Consensus 211 ~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~--~~~~~~~i~~-----d~~i~~G 277 (385)
..+.|+.|... ....|+.+++.||..... .......+.-+....+.... .......+.. ....|.|
T Consensus 100 ~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~G 178 (234)
T 3s69_A 100 EHIVPLSLPSS-PPSVGSVCHIMGWGSITPIKVTYPDVPYCAYINLLDDAVCQAGYPELLTEYRTLCAGILEGGKDTCGG 178 (234)
T ss_dssp TTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECHHHHHHHCTTCCTTSCEEEEECTTCSCBCCTT
T ss_pred CcceeeecCCC-CCCCCCEEEEEECCCCCCCCcCcccccceeEEeecCHHHHhhhcccccCCcceEeccCCCCCCccCCC
Confidence 34567777643 456799999999974322 12223333322222221100 1111233433 2457899
Q ss_pred CCCceeeCCCccEEEEeecccC
Q 016647 278 NSGGPLLDSSGSLIGINTAIYS 299 (385)
Q Consensus 278 ~SGGPlvn~~G~VVGI~s~~~~ 299 (385)
+|||||+. +++++||++++..
T Consensus 179 DSGgPL~~-~~~l~Gi~S~g~~ 199 (234)
T 3s69_A 179 DSGGPLIC-NGQFQGIVSFGAH 199 (234)
T ss_dssp CTTCEEEE-TTEEEEEEEECCS
T ss_pred CCccceEE-cCEEEEEEEEccc
Confidence 99999995 6789999998743
No 70
>1euf_A Duodenase; serine protease, dual specificity, hydrola; HET: NAG; 2.40A {Bos taurus} SCOP: b.47.1.2
Probab=99.34 E-value=4.9e-11 Score=108.90 Aligned_cols=142 Identities=22% Similarity=0.178 Sum_probs=89.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+.+ .+.|++.. .+.+..+-+..++ .+||||||++.+. ..
T Consensus 27 ~~CgGsLI~~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~~~~ 103 (227)
T 1euf_A 27 HICGGFLVRED-FVLTAAHCLGS--SINVTLGAHNIMERERTQQVIPVRRPIPHPDYNDETLANDIMLLKLTRKADITDK 103 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCE--EEEEEESCSBTTSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCCSS
T ss_pred eEEEEEEeeCC-EEEECHHHCCC--CcEEEEcccccCCCCCccEEEEEEEEEeCCCCCCCCCcCceEEEEECCcCcCCCc
Confidence 47999999987 99999999975 56666632 2234444444443 4699999998764 24
Q ss_pred CcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCCC-CCcccEEEEc-----cccCCCCCC
Q 016647 213 LRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATG-RPIQDVIQTD-----AAINPGNSG 280 (385)
Q Consensus 213 ~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~G~SG 280 (385)
+.|+.|.... .+..|+.+++.||..... .......+.-+....+..... ......+... ...+.|+||
T Consensus 104 v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~~~GDsG 183 (227)
T 1euf_A 104 VSPINLPRSLAEVKPGMMCSVAGWGRLGVNMPSTDKLQEVDLEVQSEEKCIARFKNYIPFTQICAGDPSKRKNSFSGDSG 183 (227)
T ss_dssp CCCCCCCCTTCCCCTTCEEEEEESCBSSTTCCBCSBCEEEEEEBCCTHHHHTTCTTCCTTTEEEESCTTSCCBCCTTCTT
T ss_pred eeccCCCCccccCCCCCEEEEEEEccCCCCCCCchhheEeEeccccHHHhhHhhcCcCCCcEEEccCCCCCCcccccCCC
Confidence 6677776443 357899999999974321 122333333222222211111 1112344442 223489999
Q ss_pred ceeeCCCccEEEEeecc
Q 016647 281 GPLLDSSGSLIGINTAI 297 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~ 297 (385)
|||+. +|.++||++++
T Consensus 184 gPL~~-~~~l~Gi~S~g 199 (227)
T 1euf_A 184 GPLVC-NGVAQGIVSYG 199 (227)
T ss_dssp CEEEE-TTEEEEEEEEC
T ss_pred CceEE-CCEEEEEEEEe
Confidence 99995 68999999986
No 71
>2psx_A Kallikrein-5; zinc inhibition, stratum corneum, glcosylation, hydrolase, H hydrolase inhibitor complex; HET: AR7 NAG; 2.30A {Homo sapiens} PDB: 2psy_A*
Probab=99.34 E-value=3.4e-11 Score=109.95 Aligned_cols=141 Identities=18% Similarity=0.192 Sum_probs=89.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC----------CCeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
..|+|.+|+++ ||||+|||+.+ .+.|++.. .+.+..+-+..++ .+||||||++.+. .
T Consensus 25 ~~CgGtLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (227)
T 2psx_A 25 LYCGAVLVHPQ-WLLTAAHCRKK--VFRVRLGHYSLSPVYESGQQMFQGVKSIPHPGYSHPGHSNDLMLIKLNRRIRPTK 101 (227)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SCEEEESCCBSSCCCCTTCEEEEEEEEEECTTCCSSSCTTCCEEEEESSCCCCCS
T ss_pred ceEEEEEEcCC-EEEEhHHcCCC--CcEEEEeeeecccCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEeCCCCCCCC
Confidence 47999999987 99999999974 44555532 1234444344443 4699999998764 3
Q ss_pred CCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEEc----cccCCCCCC
Q 016647 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQTD----AAINPGNSG 280 (385)
Q Consensus 212 ~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d----~~i~~G~SG 280 (385)
.+.|+.|.. ..+..|+.++++||..... .......+.-+....+.... .......+... ...|.|+||
T Consensus 102 ~v~pi~l~~-~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~C~GDSG 180 (227)
T 2psx_A 102 DVRPINVSS-HCPSAGTKCLVSGWGTTKSPQVHFPKVLQCLNISVLSQKRCEDAYPRQIDDTMFCAGDKAGRDSCQGDSG 180 (227)
T ss_dssp SSCCCCBCS-SCCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEBCCHHHHHHHSTTTCCTTEEEECCSTTCBCCTTCTT
T ss_pred ceeeeECCC-CCCCCCCEEEEEeCcccCCCCCCCCchheEEEEEecCHhHhhhhcCCCCCCCEEcccCCCCCccCCCCCC
Confidence 467788864 4567899999999975322 12233333322222111100 11112344442 357899999
Q ss_pred ceeeCCCccEEEEeecc
Q 016647 281 GPLLDSSGSLIGINTAI 297 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~ 297 (385)
|||+. ++.++||++++
T Consensus 181 gPL~~-~~~l~Gi~S~g 196 (227)
T 2psx_A 181 GPVVC-NGSLQGLVSWG 196 (227)
T ss_dssp CEEEE-TTEEEEEEEEC
T ss_pred cceee-CCEEEEEEeec
Confidence 99995 57999999986
No 72
>4e7n_A Snake-venom thrombin-like enzyme; beta-barrel, hydrolase, arginine esterase, glycosylation, extracellular; HET: NAG; 1.75A {Agkistrodon halys}
Probab=99.34 E-value=3.6e-11 Score=110.08 Aligned_cols=144 Identities=21% Similarity=0.219 Sum_probs=88.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC--------C--eEeeEEEEECC-------CCCeEEEEEcCCC---
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ--------S--AYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg--------~--~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (385)
...|+|.+|+++ ||||+|||+... +.|.+... . .+..+.+..++ .+|||||+++.+.
T Consensus 25 ~~~CgGtLI~~~-~VLTAAHC~~~~--~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~ 101 (238)
T 4e7n_A 25 TLFCGGTLINQE-WVLTAAHCDRKN--FRIKLGMHSKKVPNEDEQTRVPKEKFFCLSSKNYTLWDKDIMLIRLDSPVKNS 101 (238)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCSS--CEEEESCSCSSSCCTTCEEECEEEEECSSTTCCCCSSSCCCEEEEESSCCCCB
T ss_pred CEEEEEEEecCC-EEEEhHHcCCCC--CeEEeceeeccccCCCceeEeeeeeEEcCCCCCCCCCCCcEEEEEeCCCccCC
Confidence 357999999987 999999999754 44444321 1 12222332232 4699999998764
Q ss_pred CCCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCCC----CCcccEEEE-----ccccC
Q 016647 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAATG----RPIQDVIQT-----DAAIN 275 (385)
Q Consensus 211 ~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~~----~~~~~~i~~-----d~~i~ 275 (385)
..+.++.|... ....|+.++++||..... .......+.-+....+..... ......+.. ....|
T Consensus 102 ~~v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~Ca~~~~~~~~~C 180 (238)
T 4e7n_A 102 KHIAPFSLPSS-PPSVGSVCRIMGWGRISPTEGTYPDVPHCVNINLLEYEMCRAPYPEFELPATSRTLCAGILEGGKDTC 180 (238)
T ss_dssp TTBCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSSCEEEEEEEECGGGGTTTCGGGCCCSCCSEEEEECTTCSCBCC
T ss_pred CceeeeeCCCC-CCCCCCEEEEEECCCCCCCCCCCCccceEeeccccCHHHHhhhcccccCCCCCCeEEeCCCCCCCccC
Confidence 34667777643 456799999999974321 122333333333322221110 111233443 24578
Q ss_pred CCCCCceeeCCCccEEEEeecccC
Q 016647 276 PGNSGGPLLDSSGSLIGINTAIYS 299 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~~~~ 299 (385)
.|+|||||+. +++++||++++..
T Consensus 181 ~GDSGgPL~~-~~~l~Gi~S~g~~ 203 (238)
T 4e7n_A 181 KGDSGGPLIC-NGQFQGIASWGDD 203 (238)
T ss_dssp TTCTTCEEEE-TTEEEEEEEECCS
T ss_pred CCCCCcceEE-CCEEEEEEEEeCC
Confidence 9999999995 6789999998743
No 73
>3ncl_A Suppressor of tumorigenicity 14 protein; proteinase-inhibitor complex, serine proteinase, benzamidine phosphonate, serine endopeptidases; HET: CCZ; 1.19A {Homo sapiens} SCOP: b.47.1.2 PDB: 3bn9_B* 3nps_A 3so3_A* 1eax_A 1eaw_A 2gv6_A* 2gv7_A* 3p8g_A* 3p8f_A*
Probab=99.34 E-value=4.4e-11 Score=109.74 Aligned_cols=146 Identities=16% Similarity=0.205 Sum_probs=90.5
Q ss_pred eEEEEEEEcCCCEEEecccccCCC--------CeEEEEecC----------CCeEeeEEEEECC-------CCCeEEEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA--------SDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRI 206 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--------~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv 206 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+||||||+
T Consensus 25 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L 103 (241)
T 3ncl_A 25 HICGASLISPN-WLVSAAHCYIDDRGFRYSDPTQWTAFLGLHDQSQRSAPGVQERRLKRIISHPFFNDFTFDYDIALLEL 103 (241)
T ss_dssp EEEEEEECSSS-EEEECGGGGCCBTTBCTTCGGGEEEEESCSBTTCTTSTTCEEEEEEEEEECTTCCTTTCTTCCEEEEE
T ss_pred eEEEEEEeeCC-EEEEcHHhcccCCCccccCCceEEEEEeccccccCCCCCceEEEEEEEEECCCCCCCCCCCcEEEEEE
Confidence 47999999987 999999999643 346676632 1334555555554 469999999
Q ss_pred cCCC---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCC-CCCcccEEEE-----c
Q 016647 207 DAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQT-----D 271 (385)
Q Consensus 207 ~~~~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~-----d 271 (385)
+.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+.... .......+.. .
T Consensus 104 ~~~~~~~~~v~piclp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~ 183 (241)
T 3ncl_A 104 EKPAEYSSMVRPISLPDASHVFPAGKAIWVTGWGHTQYGGTGALILQKGEIRVINQTTCENLLPQQITPRMMCVGFLSGG 183 (241)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEECCHHHHHHHSTTTCCTTEEEEECTTCS
T ss_pred CCCCcccCccCceEcCCcccCCCCCCEEEEEEecccCCCCCcCceeeEEeEEEECHHHhhhhcccCCCCCeEEeCCCCCC
Confidence 8764 245677775433 356899999999974321 12233333322222221101 1112234443 2
Q ss_pred cccCCCCCCceee--CCCcc--EEEEeeccc
Q 016647 272 AAINPGNSGGPLL--DSSGS--LIGINTAIY 298 (385)
Q Consensus 272 ~~i~~G~SGGPlv--n~~G~--VVGI~s~~~ 298 (385)
...|.|+|||||+ +.+|+ ++||++++.
T Consensus 184 ~~~C~GDsGgPl~~~~~~g~~~l~Gi~S~g~ 214 (241)
T 3ncl_A 184 VDSCQGDSGGPLSSVEADGRIFQAGVVSWGD 214 (241)
T ss_dssp SBCCTTCTTCEEEEECTTSCEEEEEEEEECS
T ss_pred CccCCCcCCCCEEEEcCCCcEEEEEEEEECC
Confidence 3578999999997 34565 899999864
No 74
>1aut_C Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: b.47.1.2 PDB: 3f6u_H*
Probab=99.34 E-value=2.4e-11 Score=112.65 Aligned_cols=147 Identities=20% Similarity=0.258 Sum_probs=91.9
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
...|.|.+|+++ ||||+|||+.+...+.|++... ..+..+-+..++ .+|||||+++.+. .
T Consensus 24 ~~~CgGsLI~~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (250)
T 1aut_C 24 KLACGAVLIHPS-WVLTAAHCMDESKKLLVRLGEYDLRRWEKWELDLDIKEVFVHPNYSKSTTDNDIALLHLAQPATLSQ 102 (250)
T ss_dssp CEEEEEEEEETT-EEEECGGGSSSCSCCEEEESCCBTTCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred ceEEEEEEeeCC-EEEEChHHcCCCCceEEEEcccccCCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCcccCCC
Confidence 357999999987 9999999998877788887532 234444444543 3699999998764 2
Q ss_pred CCcceecCCCC-----CCCCCCEEEEEeCCCCCCC----------ceEEeEEeeeeeeeccCC-CCCCcccEEEEc----
Q 016647 212 KLRPIPIGVSA-----DLLVGQKVYAIGNPFGLDH----------TLTTGVISGLRREISSAA-TGRPIQDVIQTD---- 271 (385)
Q Consensus 212 ~~~~l~l~~~~-----~~~~G~~V~~iG~p~g~~~----------~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d---- 271 (385)
.+.|+.|.... ....|+.+++.||+..... ......+.-+....+... ........+...
T Consensus 103 ~v~picLp~~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~Cag~~~~ 182 (250)
T 1aut_C 103 TIVPICLPDSGLAERELNQAGQETLVTGWGYHSSREKEAKRNRTFVLNFIKIPVVPHNECSEVMSNMVSENMLCAGILGD 182 (250)
T ss_dssp TBCCCBCCCHHHHHHTTTSTTCEEEEEECCCCCSCCSCCCSSCSSBCEEEEEEEECHHHHHHHCSSCCCTTEEEECCTTC
T ss_pred ceeeeEcCCCccccccccCCCCEEEEEEeCCCCCCCccccccccceeeEEEEEEecHHHhhHHhccCCCCCEEEeCCCCC
Confidence 45677775321 2357999999999743221 122222222222111110 011122344442
Q ss_pred -cccCCCCCCceeeC-CCcc--EEEEeeccc
Q 016647 272 -AAINPGNSGGPLLD-SSGS--LIGINTAIY 298 (385)
Q Consensus 272 -~~i~~G~SGGPlvn-~~G~--VVGI~s~~~ 298 (385)
...|.|+|||||+. .+|+ ++||++++.
T Consensus 183 ~~~~C~GDSGGPL~~~~~g~~~l~GI~S~g~ 213 (250)
T 1aut_C 183 RQDACEGDSGGPMVASFHGTWFLVGLVSWGE 213 (250)
T ss_dssp CCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCCCCCCCchheEEEECCeEEEEEEEEECC
Confidence 35789999999985 3554 999999864
No 75
>3gov_B MAsp-1; complement, serine protease, beta barrel, hydrolase, hydroxy immune response, innate immunity, sushi, coagulation, compl pathway; 2.55A {Homo sapiens} SCOP: b.47.1.0 PDB: 4djz_B
Probab=99.33 E-value=6.4e-11 Score=109.10 Aligned_cols=146 Identities=21% Similarity=0.240 Sum_probs=91.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----------------CCeEEEEecC---------CCeEeeEEEEECCC-------
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRG----------------ASDIRVTFAD---------QSAYDAKIVGFDQD------- 198 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----------------~~~i~V~~~d---------g~~~~a~vv~~d~~------- 198 (385)
...|+|.+|+++ ||||+|||+.+ ...+.|.+.. ++.+..+-+..++.
T Consensus 24 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~ 102 (251)
T 3gov_B 24 QPFCGGSLLGSS-WIVTAAHCLHQSLDPKDPTLRDSDLLSPSDFKIILGKHWRLRSDENEQHLGVKHTTLHPQYDPNTFE 102 (251)
T ss_dssp CEEEEEEEETTT-EEEECGGGGBCCCCTTSCCCCGGGBCCGGGEEEEESCCBSSSCCSSCEEECEEEEEECTTCBTTTTB
T ss_pred CeeEEEEEecCC-EEEECHhhccccccccccccccccccccccEEEEecceeccCCCCcceEeeeEEEEECCCCCCCCCC
Confidence 347999999987 99999999954 2457777643 22344554555543
Q ss_pred CCeEEEEEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCC----CCCcccE
Q 016647 199 KDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAAT----GRPIQDV 267 (385)
Q Consensus 199 ~DlAlLkv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~----~~~~~~~ 267 (385)
+|||||+++.+. ..+.|+.|.... ...|+.+++.||..... .......+.-+....+.... .......
T Consensus 103 ~DIAll~L~~~~~~~~~v~picLp~~~-~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~ 181 (251)
T 3gov_B 103 NDVALVELLESPVLNAFVMPICLPEGP-QQEGAMVIVSGWGKQFLQRFPETLMEIEIPIVDHSTCQKAYAPLKKKVTRDM 181 (251)
T ss_dssp TCCEEEEESSCCCCSSSCCCCBCCSSC-CCTTCEEEEEECSCCTTSCCCSBCEEEEEEEECHHHHHHHTTTTTCCCCTTE
T ss_pred CCEEEEEeCCcccCCCceEEeECCCCC-CCCCCEEEEEcCCCCCCCCCCccceEEeeEEECHHHhhhhhhhccCCCCCCc
Confidence 699999998754 345677886543 47899999999975422 12233333322222111100 1112234
Q ss_pred EEEc-----cccCCCCCCceeeC---CCc--cEEEEeeccc
Q 016647 268 IQTD-----AAINPGNSGGPLLD---SSG--SLIGINTAIY 298 (385)
Q Consensus 268 i~~d-----~~i~~G~SGGPlvn---~~G--~VVGI~s~~~ 298 (385)
+... ...|.|+|||||+. .+| .++||++++.
T Consensus 182 ~Ca~~~~~~~~~C~GDsGgPl~~~~~~~~~~~l~Gi~S~g~ 222 (251)
T 3gov_B 182 ICAGEKEGGKDACAGDSGGPMVTLNRERGQWYLVGTVSWGD 222 (251)
T ss_dssp EEESCTTCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred EEecCCCCCCccCCCCCCCeEEeeeCCCCcEEEEEEEEECC
Confidence 5442 45789999999985 234 6999999863
No 76
>4i8h_A Cationic trypsin, beta-trypsin; serine protease, hydrolase; HET: BEN; 0.75A {Bos taurus} PDB: 1aq7_A* 1auj_A* 1bju_A* 1bjv_A* 1az8_A* 1c1o_A 1c1n_A* 1c1q_A* 1c1r_A* 1c1s_A* 1c1t_A* 1c2d_A* 1c2e_A* 1c2f_A* 1c2g_A* 1c2h_A* 1c2i_A* 1c2j_A* 1c2k_A* 1c2l_A ...
Probab=99.33 E-value=3.3e-11 Score=109.41 Aligned_cols=142 Identities=19% Similarity=0.237 Sum_probs=90.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~ 212 (385)
..|+|.+|+++ ||||+|||+.. .+.|.+.. .+.+..+-+..++ .+|||||+++.+. ..
T Consensus 23 ~~C~GtLI~~~-~VLTAAhC~~~--~~~v~~g~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~DIAll~L~~~~~~~~~ 99 (223)
T 4i8h_A 23 HFCGGSLINSQ-WVVSAAHCYKS--GIQVRLGEDNINVVEGNEQFISASKSIVHPSYNSNTLNNDIMLIKLKSAASLNSR 99 (223)
T ss_dssp EEEEEEECSSS-EEEECGGGCCS--SCEEEESCSSTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCBTT
T ss_pred cEEEEEEEcCC-EEEecHHhCCC--CcEEEEccccccccCCCcEEEEEeEEEECcCCCCCCCcCCEEEEEECCcCcCCCc
Confidence 46999999987 99999999975 44555532 1234444445554 4699999998764 35
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCC-CCCCcccEEEEc-----cccCCCCCC
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA-TGRPIQDVIQTD-----AAINPGNSG 280 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d-----~~i~~G~SG 280 (385)
+.++.|... ....|+.+++.||..... .......+.-+....+... ........+... ...|.|+||
T Consensus 100 v~pi~l~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsG 178 (223)
T 4i8h_A 100 VASISLPTS-CASAGTQCLISGWGNTKSSGTSYPDVLKCLKAPILSDSSCKSAYPGQITSNMFCAGYLEGGKDSCQGDSG 178 (223)
T ss_dssp BCCCBCCSS-CCCTTCEEEEEESSCCCSSSCCCCSSCEEEEEEBCCHHHHHHHSTTTCCTTEEEESCTTSSCBCCTTCTT
T ss_pred eeceECCCC-CCCCCCEEEEEecccccCCCCCccccceEEEeeecCHHHHHHhhCCCCCCCeEeccCCCCCCccCCCCCC
Confidence 677888654 367899999999974322 1123333332222211110 011122344432 356889999
Q ss_pred ceeeCCCccEEEEeeccc
Q 016647 281 GPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~~ 298 (385)
|||+. +++++||++++.
T Consensus 179 gPl~~-~~~l~Gi~S~g~ 195 (223)
T 4i8h_A 179 GPVVC-SGKLQGIVSWGS 195 (223)
T ss_dssp CEEEE-TTEEEEEEEECS
T ss_pred CcEEE-CCEEEEEEEcCC
Confidence 99995 679999999864
No 77
>2any_A Kininogenin, plasma kallikrein, light chain, fletcher factor; mutagenically deglycosyalted human plasma kallikrein protease domain; HET: BAM; 1.40A {Homo sapiens} PDB: 2anw_A*
Probab=99.33 E-value=5.7e-11 Score=109.28 Aligned_cols=146 Identities=21% Similarity=0.268 Sum_probs=91.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK-- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~-- 210 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..++ .+|||||+++.+.
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (241)
T 2any_A 27 HLCGGSLIGHQ-WVLTAAHCFDGLPLQDVWRIYSGILELSDITKDTPFSQIKEIIIHQNYKVSEGNHDIALIKLQAPLEY 105 (241)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCCSTTEEEECSCSBGGGCCTTSCCBCEEEEEECTTCCTTSSSSCCEEEEESSCCCC
T ss_pred eEEEEEEecCC-EEEECHHHcCCCCCCccEEEEeeeeeccccccCceEEeeEEEEECCCCCCCCCCCCeEEEEeCCcccC
Confidence 47999999987 999999999764 446666532 2234445444543 4699999998764
Q ss_pred -CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCCC--CCcccEEEEc-----cccCC
Q 016647 211 -DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATG--RPIQDVIQTD-----AAINP 276 (385)
Q Consensus 211 -~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~d-----~~i~~ 276 (385)
..+.|+.|.... ....|+.++++||..... .......+.-+....+..... ......+... ...|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (241)
T 2any_A 106 TEFQKPISLPSKGDTSTIYTNCWVTGWGFSKEKGEIQNILQKVNIPLVTNEECQKRYQDYKITQRMVCAGYKEGGKDACK 185 (241)
T ss_dssp BTTBCCCCCCCSSCCSTTCSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHTTSCTTCSCTTEEEECCTTCCCBCCT
T ss_pred CCCcceeEcCCcccCCCCCCeEEEEecccCCCCCCcCchhheeEeEEeCHHHhhhHhccCCCCcCcEeecCCCCCCccCC
Confidence 245677776433 356799999999975322 122333333222222211111 1122344442 35789
Q ss_pred CCCCceeeCC-Cc--cEEEEeeccc
Q 016647 277 GNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 277 G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
|+|||||+.. +| .|+||++++.
T Consensus 186 GDsGgPl~~~~~~~~~l~GI~S~g~ 210 (241)
T 2any_A 186 GDSGGPLVCKHNGMWRLVGITSWGE 210 (241)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCCCcEEEEECCEEEEEEEEEecC
Confidence 9999999853 44 6999999864
No 78
>1ym0_A Fibrinotic enzyme component B; two chains, glycosylation, pyroglutamation, eight-membered R peptide bond, hydrolase; HET: NAG MAN FUC; 2.06A {Eisenia fetida}
Probab=99.33 E-value=2.7e-11 Score=111.14 Aligned_cols=146 Identities=21% Similarity=0.234 Sum_probs=91.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCC--CeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~--- 210 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+||||||++.+.
T Consensus 26 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~ 104 (238)
T 1ym0_A 26 HFCGGSIINDR-WVVCAAHCMQGEAPALVSLVVGEHDSSAASTVRQTHDVDSIFVNENYDPATLENDVSVIKTAVAITFD 104 (238)
T ss_dssp EEEEEEEEETT-EEEECHHHHTTCCGGGEEEEESCSBTTSCCSSCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCCCS
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCceEEEEEcccccCCCCCCceEEEEEEEEECCCCCCCCCcccEEEEEeCCCcccc
Confidence 47999999987 999999999764 567777743 2234455444443 4699999998764
Q ss_pred CCCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccC--CCCCCcccEEEEc-------cccC
Q 016647 211 DKLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSA--ATGRPIQDVIQTD-------AAIN 275 (385)
Q Consensus 211 ~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~--~~~~~~~~~i~~d-------~~i~ 275 (385)
..+.|+.|........++.+++.||..... .......+.-+....+.. .........+... ...|
T Consensus 105 ~~v~picLp~~~~~~~~~~~~~~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~~~C 184 (238)
T 1ym0_A 105 INVGPICAPDPANDYVYRKSQCSGWGTINSGGVCCPAVLRYVTLNITTNAFCDAVYTSDTIYDDMICATDNTGMTDRDSC 184 (238)
T ss_dssp SSCCCCBCCCTTCCCTTCEEEEEESCCSSTTCCSCCSBCEEEEEEECCHHHHHHHCTTSCCCTTEEEEECSSCSSSCBCC
T ss_pred CcccccCCCCCcCCCCCCceEEEeecCCCCCCCcCCccceEEEEEeeCHHHHhHhhcccccCCCeEEecCCCCCCcCccC
Confidence 246777776544323789999999975322 122333333222221111 0001122344431 4678
Q ss_pred CCCCCceeeCC--Cc--cEEEEeeccc
Q 016647 276 PGNSGGPLLDS--SG--SLIGINTAIY 298 (385)
Q Consensus 276 ~G~SGGPlvn~--~G--~VVGI~s~~~ 298 (385)
.|+|||||+.. +| .++||++++.
T Consensus 185 ~GDsGgPL~~~~~~~~~~l~Gi~S~g~ 211 (238)
T 1ym0_A 185 QGDSGGPLSVKDGSGIFSLVGIVSWGI 211 (238)
T ss_dssp TTTTTCEEEEECTTCCEEEEEEEEECS
T ss_pred CCccCCeeEEECCCCCEEEEEEEeECC
Confidence 99999999853 35 6999999864
No 79
>1spj_A Kallikrein 1; serine protease, KLK1, HK1, hydrolase; HET: NAG; 1.70A {Homo sapiens}
Probab=99.33 E-value=1.9e-11 Score=112.26 Aligned_cols=142 Identities=19% Similarity=0.216 Sum_probs=88.6
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC------------------CCCeEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ------------------DKDVAVL 204 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~------------------~~DlAlL 204 (385)
..|.|.+|+++ ||||+|||+.+ .+.|.+.. .+.+..+-+..++ .+|||||
T Consensus 24 ~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~~~~~~~~~~~DIALl 100 (238)
T 1spj_A 24 FQCGGILVHRQ-WVLTAAHCISD--NYQLWLGRHNLFDDENTAQFVHVSESFPHPGFNMSLLENHTRQADEDYSHDLMLL 100 (238)
T ss_dssp EEEEEEEEETT-EEEECGGGCCS--SEEEEESCSBTTSCCTTCEEECEEEEEECTTSCGGGGCC--CTTTCCCTTCCEEE
T ss_pred eeEEEEEecCC-EEEEcHHhCCC--CceEEEEeccccCCCCCceEEEEEEEEcCCCccccccccccccccccCCCCeEEE
Confidence 47999999987 99999999975 45566532 1233344333332 3599999
Q ss_pred EEcCCCC----CCcceecCCCCCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEEc--
Q 016647 205 RIDAPKD----KLRPIPIGVSADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-- 271 (385)
Q Consensus 205 kv~~~~~----~~~~l~l~~~~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d-- 271 (385)
+++.+.. .+.++.|... ....|+.++++||..... .......+.-+....+.... .......+...
T Consensus 101 ~L~~~~~~~~~~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~ 179 (238)
T 1spj_A 101 RLTEPADTITDAVKVVELPTE-EPEVGSTCLASGWGSIEPENFSFPDDLQCVDLKILPNDECKKAHVQKVTDFMLCVGHL 179 (238)
T ss_dssp EESSCCCCSSTTCCCCCCCSS-CCCTTCEEEEEESSCSSSSSCCCCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEEECT
T ss_pred EECccccccCCceeeccCCCC-CCCCCCEEEEEecCCCCCCCCCCcCcccEEEEeecCHHHhhhhccCCCCCCeEEeeCC
Confidence 9987642 3567777643 456799999999974321 12233333322222111100 11112344432
Q ss_pred ---cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 272 ---AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 272 ---~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
...|.|+|||||+. +|.++||++++.
T Consensus 180 ~~~~~~C~GDSGgPL~~-~~~l~Gi~S~g~ 208 (238)
T 1spj_A 180 EGGKDTCVGDSGGPLMC-DGVLQGVTSWGY 208 (238)
T ss_dssp TCSSBCCTTCTTCEEEE-TTEEEEEEEECC
T ss_pred CCCCCCCCCCCCCcEEE-cCEEEEEEEeCC
Confidence 35789999999995 689999999863
No 80
>2hlc_A Collagenase; serine protease, hydrolase, collagen degradation; 1.70A {Hypoderma lineatum} SCOP: b.47.1.2 PDB: 1hyl_A
Probab=99.33 E-value=3.9e-11 Score=109.64 Aligned_cols=146 Identities=18% Similarity=0.199 Sum_probs=92.4
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC------CeEeeEEEEECC-------CCCeEEEEEcCCC---CCCc
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKLR 214 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~~ 214 (385)
...|+|.+|+++ ||||+|||+.+...+.|.+... ..+..+-+..++ .+|||||+++ +. +.+.
T Consensus 27 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~-~~~~~~~v~ 104 (230)
T 2hlc_A 27 RVWCGGSLIDNK-WILTAAHCVHDAVSVVVYLGSAVQYEGEAVVNSERIISHSMFNPDTYLNDVALIKIP-HVEYTDNIQ 104 (230)
T ss_dssp EEEEEEEEEETT-EEEECHHHHTTEEEEEEEESCSBTTCCSEEEECSEEEECTTCBTTTTBTCCEEEECS-CCCCCSSCC
T ss_pred CEEEEEEEeeCC-EEEECHHHCCCCcceEEEEeeeecCCCCeEEEEEEEEECCCCCCCCccccEEEEEec-CCCcCCcEe
Confidence 347999999987 9999999998877788887542 233333344443 4699999998 43 3467
Q ss_pred ceecCCCC---CCCCCCEEEEEeCCCCCCC--ceEEeEEeeeeeeeccCCCC--CCcccEEEEc----cccCCCCCCcee
Q 016647 215 PIPIGVSA---DLLVGQKVYAIGNPFGLDH--TLTTGVISGLRREISSAATG--RPIQDVIQTD----AAINPGNSGGPL 283 (385)
Q Consensus 215 ~l~l~~~~---~~~~G~~V~~iG~p~g~~~--~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~d----~~i~~G~SGGPl 283 (385)
|+.|.... ....|+.+.+.||...... ......+.-+....+..... ......+... ...|.|+|||||
T Consensus 105 picLp~~~~~~~~~~~~~~~v~GwG~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~C~GDSGgPl 184 (230)
T 2hlc_A 105 PIRLPSGEELNNKFENIWATVSGWGQSNTDTVILQYTYNLVIDNDRCAQEYPPGIIVESTICGDTSDGKSPCFGDSGGPF 184 (230)
T ss_dssp CCBCCCGGGGGCCCTTCEEEEEESSCCSSCCCBCEEEEEEEECHHHHHTTSCTTSSCTTEEEECCTTSCBCCTTCTTCEE
T ss_pred eeEcCCccccccccCCcEEEEEeeeecCCCCceeEEEEEEEeCHHHhhhhhCCCcccCCeEEecCCCCCCcCCCCCCCee
Confidence 77776433 2457899999999754322 22333333222222211111 1122344432 357899999999
Q ss_pred eC-CCccEEEEeeccc
Q 016647 284 LD-SSGSLIGINTAIY 298 (385)
Q Consensus 284 vn-~~G~VVGI~s~~~ 298 (385)
+. .++.++||++++.
T Consensus 185 ~~~~~~~l~Gi~S~g~ 200 (230)
T 2hlc_A 185 VLSDKNLLIGVVSFVS 200 (230)
T ss_dssp EEGGGTEEEEEEEECC
T ss_pred EECcCCEEEEEEEEeC
Confidence 84 3458999999864
No 81
>3fzz_A Granzyme C; hydrolase, cytolysis, protease, serine protease, zymogen; 2.50A {Mus musculus} SCOP: b.47.1.2 PDB: 3g01_A
Probab=99.33 E-value=3.1e-11 Score=109.81 Aligned_cols=159 Identities=19% Similarity=0.199 Sum_probs=97.5
Q ss_pred CCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEEC
Q 016647 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFD 196 (385)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d 196 (385)
-|-+|.|....... ....|+|.+|+++ ||||+|||+. ..+.|.+.. ++.+..+-+..+
T Consensus 12 ~Pw~v~l~~~~~~~----------~~~~CgGtLI~~~-~VLTAAHC~~--~~~~v~~G~~~~~~~~~~~~~~~v~~~~~h 78 (227)
T 3fzz_A 12 RPYMAYYEFLKVGG----------KKMFCGGFLVRDK-FVLTAAHCKG--RSMTVTLGAHNIKAKEETQQIIPVAKAIPH 78 (227)
T ss_dssp STTEEEEEEECSSS----------CEEEEEEEEEETT-EEEECTTCCC--EEEEEEESCSBTTSCCTTCEEEEEEEEEEC
T ss_pred cCCEEEEEEEeCCC----------ceeEEEEEEEeCC-EEEECcccCC--CCcEEEEcccccCCCCCCceEEEEEEEEEC
Confidence 46677776532111 1347999999987 9999999985 356666642 123445555555
Q ss_pred CC-------CCeEEEEEcCCC---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccC--
Q 016647 197 QD-------KDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA-- 258 (385)
Q Consensus 197 ~~-------~DlAlLkv~~~~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~-- 258 (385)
+. +|||||+++.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+..
T Consensus 79 p~y~~~~~~~DIALl~L~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~ 158 (227)
T 3fzz_A 79 PDYNPDDRSNDIMLLKLVRNAKRTRAVRPLNLPRRNAHVKPGDECYVAGWGKVTPDGEFPKTLHEVKLTVQKDQVCESQF 158 (227)
T ss_dssp TTCBTTTTBTCCEEEEESSCCCCBTTBCCCCCCCTTCCCCTTCEEEEEESSCSSTTSCCCSBCEEEEEEBCCHHHHHHHH
T ss_pred cCCCCCCCcCCEEEEEECCcCCCCCcccccCCCCcccCCCCCCEEEEEECCcccCCCCCCCeeeEEEeeeecHHHhhhhh
Confidence 43 599999998764 345677775433 357899999999974321 122333333222222211
Q ss_pred CCCCCcccEEEEc-----cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 259 ATGRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 259 ~~~~~~~~~i~~d-----~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
.........+... ...|.|+|||||+. ++.++||++++.
T Consensus 159 ~~~~~~~~~~Ca~~~~~~~~~C~gDsGgPl~~-~~~l~Gi~S~g~ 202 (227)
T 3fzz_A 159 QSSYNRANEICVGDSKIKGASFEEDSGGPLVC-KRAAAGIVSYGQ 202 (227)
T ss_dssp TTTCCTTTEEEECCCSSCBCCTTTTTTCEEEE-TTEEEEEEEECC
T ss_pred ccccCCCceEEEeCCCCCCcccccCCccceEE-ecCCcEEEEECC
Confidence 0111122344432 34678999999995 579999999864
No 82
>2r0l_A Hepatocyte growth factor activator; serine protease, antibody, allosteric inhibitor, EGF-like DO glycoprotein, hydrolase, kringle, secreted; HET: NAG BMA; 2.20A {Homo sapiens} PDB: 3k2u_A* 2wub_A* 2wuc_A*
Probab=99.32 E-value=7.8e-11 Score=108.76 Aligned_cols=146 Identities=18% Similarity=0.234 Sum_probs=92.2
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC---------CeEeeEEEEEC--------CCCCeEEEEEcCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFD--------QDKDVAVLRIDAP-- 209 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d--------~~~DlAlLkv~~~-- 209 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+... +.+..+-+..+ ..+|||||+++.+
T Consensus 23 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DiALl~L~~~~~ 101 (248)
T 2r0l_A 23 SFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKGD 101 (248)
T ss_dssp EEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCSSS
T ss_pred ceEEEEEEcCC-EEEECHHHcCCCCCcCcEEEEEEeEEcCCCCCccEEEeeeEEEeCCccCcCCCCCCCEEEEEeCCccc
Confidence 47999999987 999999999764 4578877532 23344433333 2469999999876
Q ss_pred --C---CCCcceecCCC-CCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc---
Q 016647 210 --K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD--- 271 (385)
Q Consensus 210 --~---~~~~~l~l~~~-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d--- 271 (385)
. ..+.|+.|... ..+..|+.+++.||..... .......+.-+....+... .. ......+...
T Consensus 102 ~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~ 181 (248)
T 2r0l_A 102 RCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYFD 181 (248)
T ss_dssp CSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSSSCCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCSS
T ss_pred ccccCCCcEEEEECCCCCCCCCCCCEEEEEEccccCCCCCCCCchheEEEEeeeCHHHhCCccccCCcCCCCEEeECCCC
Confidence 2 34667777643 3456899999999974321 2233333433333222211 00 1112344442
Q ss_pred --cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 272 --AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 272 --~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+.. +| .++||++++.
T Consensus 182 ~~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~ 213 (248)
T 2r0l_A 182 CKSDACQGDSGGPLACEKNGVAYLYGIISWGD 213 (248)
T ss_dssp SCCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCcCCCCccCCeEEEEECCcEEEEEEEEeCC
Confidence 357899999999853 45 5999999864
No 83
>1sgf_A 7S NGF, nerve growth factor; growth factor (beta-NGF), hydrolase - serine proteinase (GAM inactive serine proteinase (alpha-NGF); HET: NAG NDG; 3.15A {Mus musculus} SCOP: b.47.1.2
Probab=99.32 E-value=1.5e-11 Score=113.23 Aligned_cols=141 Identities=21% Similarity=0.225 Sum_probs=82.6
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEEC------------------CCCCeEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFD------------------QDKDVAVL 204 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d------------------~~~DlAlL 204 (385)
..|+|.+|+++ ||||+|||+.+ .+.|.+.. ++.+..+-+..+ ..+|||||
T Consensus 27 ~~CgGsLIs~~-~VLTAAHC~~~--~~~v~~G~~~~~~~~~~~~~~~v~~~~~Hp~y~~~~~~~~~~~~~~~~~~DIALl 103 (240)
T 1sgf_A 27 YQCGGVLLDRN-WVLTAAHCYND--KYQVWLGKNNFLEDEPSDQHRLVSKAIPHPDFNMSLLNEHTPQPEDDYSNDLMLL 103 (240)
T ss_dssp CCEEEEECSSS-EEEECGGGCCS--CCEEEECC----C-CTTCEEEEEEEEEECTTSCGGGC----CCTTCBCTTCCEEE
T ss_pred eEEEEEEecCC-EEEECHHhCCC--CceEEeCCcccccCCCCceEEEEEEEEcCCCCcccccccccccccCCCCCceEEE
Confidence 47999999987 99999999974 34555432 223334433333 24699999
Q ss_pred EEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCCCC------ceEEeEEeeeeeeeccCCCC-CCcccEEEEc---
Q 016647 205 RIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLDH------TLTTGVISGLRREISSAATG-RPIQDVIQTD--- 271 (385)
Q Consensus 205 kv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~------~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d--- 271 (385)
+++.+. +.+.|+.|... ....|+.+++.||...... ......+.-+....+..... ......+...
T Consensus 104 ~L~~~~~~~~~v~picL~~~-~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~ 182 (240)
T 1sgf_A 104 RLSKPADITDVVKPITLPTE-EPKLGSTCLASGWGSTTPIKFKYPDDLQCVNLKLLPNEDCDKAHEMKVTDAMLCAGEMD 182 (240)
T ss_dssp EESSCCCCCSSCCCCCCCCS-CCCTTCEEEEC-------C---------CEEEEEECTHHHHTTCSSBCCTTEEEEEECS
T ss_pred EeCCcCcCCCcccccCCCCC-CCCCCCEEEEEecCCCCCCCCCCCccccEEeeeEeCHHHhhhhhCCCcCCCeEeEccCC
Confidence 998764 24678888654 4678999999999743211 11222222222211111111 1112344432
Q ss_pred --cccCCCCCCceeeCCCccEEEEeecc
Q 016647 272 --AAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 272 --~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
...|.|+|||||+. +|.++||++++
T Consensus 183 ~~~~~C~GDSGgPL~~-~~~l~GI~S~g 209 (240)
T 1sgf_A 183 GGSYTCEHDSGGPLIC-DGILQGITSWG 209 (240)
T ss_dssp SSEEECCCCTTCEEEE-TTEEEEEECCC
T ss_pred CCCCCCCCCCcCcEEE-ccEEEEEEEEC
Confidence 24789999999995 78999999986
No 84
>3s9c_A Vipera russelli proteinase RVV-V gamma; serine proteinase, double six-stranded beta-barrels, hydrola glycosylation; HET: NAG BMA BGC GLC; 1.80A {Daboia russellii siamensis} PDB: 3s9b_A* 3s9a_A* 3sbk_A*
Probab=99.31 E-value=5.3e-11 Score=108.74 Aligned_cols=143 Identities=18% Similarity=0.202 Sum_probs=87.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC--------CeE--eeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ--------SAY--DAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg--------~~~--~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
..|+|.+|+++ ||||+|||+.. .+.|.+... ... ....+..++ .+|||||+++.+. .
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~--~~~v~~g~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~DIALl~L~~~v~~~~ 102 (234)
T 3s9c_A 26 IHCAGALINRE-WVLTAAHCDRR--NIRIKLGMHSKNIRNEDEQIRVPRGKYFCLNTKFPNGLDKDIMLIRLRRPVTYST 102 (234)
T ss_dssp EEEEEEEEETT-EEEECGGGCCT--TEEEEESCSSSSSCCTTCEEECEEEEECCSSCSSTTCGGGCCEEEEESSCCCCBT
T ss_pred EEEeeEEeeCC-EEEEchhhcCC--CceEEEeecccccccCCcceEEeeeEEEeCCCCCCCCCcCceEEEEECCccccCC
Confidence 46999999987 99999999974 455555321 111 122222232 3599999998764 3
Q ss_pred CCcceecCCCCCCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCCC--CCcccEEEE-----ccccCCCCCC
Q 016647 212 KLRPIPIGVSADLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG--RPIQDVIQT-----DAAINPGNSG 280 (385)
Q Consensus 212 ~~~~l~l~~~~~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~-----d~~i~~G~SG 280 (385)
.+.++.|... ....|+.++++||..... .......+.-+....+..... ......+.. ....|.|+||
T Consensus 103 ~v~pi~L~~~-~~~~~~~~~v~GwG~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSG 181 (234)
T 3s9c_A 103 HIAPVSLPSR-SRGVGSRCRIMGWGKISTTTYPDVPHCTNIFIVKHKWCEPLYPWVPADSRTLCAGILKGGRDTCHGDSG 181 (234)
T ss_dssp TBCCCBCCSS-CCCTTCEEEEEESSCSBTTBCCSSCEEEEEEEECGGGTTTTCTTSCTTSSEEEEECTTSSCBCCTTCTT
T ss_pred cccccccCCC-CCCCCCeEEEEeeCCCCCCCCCccccccceEecCHHHhhhcccCCCCCcceEEeecCCCCCccCCCCCC
Confidence 5677888644 456799999999974322 122233333222222221111 111234443 2457889999
Q ss_pred ceeeCCCccEEEEeecccC
Q 016647 281 GPLLDSSGSLIGINTAIYS 299 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~~~ 299 (385)
|||+. +++++||++++..
T Consensus 182 gPl~~-~~~l~Gi~S~g~~ 199 (234)
T 3s9c_A 182 GPLIC-NGEMHGIVAGGSE 199 (234)
T ss_dssp CEEEE-TTEEEEEEEECCS
T ss_pred CeEEE-eCCcEEEEEEeCC
Confidence 99995 6789999998743
No 85
>1pyt_D TC, PCPA-TC, chymotrypsinogen C; ternary complex (zymogen), serine proteinase, C-terminal peptidase; 2.35A {Bos taurus} SCOP: b.47.1.2
Probab=99.31 E-value=1e-10 Score=108.36 Aligned_cols=146 Identities=17% Similarity=0.206 Sum_probs=92.7
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC----------CeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ----------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg----------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
..|.|.+|+++ ||||+|||+.+...+.|.+... ..+..+.+..++ .+|||||+++.+. .
T Consensus 41 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 119 (251)
T 1pyt_D 41 HTCGGTLITPN-HVLTAAHCISNTLTYRVALGKNNLEVEDEAGSLYVGVDTIFVHEKWNSFLVRNDIALIKLAETVELGD 119 (251)
T ss_dssp EEEEEEEEETT-EEEECGGGCCTTCCEEEEESCSBTTCSCCSSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCCCS
T ss_pred eEEEeEEecCC-EEEECHHHhCCCceEEEEEcccccccCCCCCcEEEEEEEEEECCCCCCCCCCCCEEEEEECCCcccCC
Confidence 47999999987 9999999999877888887432 123444444443 4699999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCCCCCC-----ceEEeEEeeeeeeeccCC---CCCCcccEEEEc----cccCCCC
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAA---TGRPIQDVIQTD----AAINPGN 278 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~d----~~i~~G~ 278 (385)
.+.|+.|.... .+..|+.+++.||...... ......+.-+....+... ........+... ...|.|+
T Consensus 120 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~C~GD 199 (251)
T 1pyt_D 120 TIQVACLPSEGSLLPQDYPCFVTGWGRLYTNGPIAAELQQGLQPVVDYATCSQRDWWGTTVKETMVCAGGDGVISACNGD 199 (251)
T ss_dssp SCCCCBCCCTTCCCCTTCEEEECBCCCSSCCSCCCSBCBCCEEECBCHHHHTSTTTTTTTCCTTEEEECCSCSSCCCCSC
T ss_pred CeeeeEcCCCcccCCCCCEEEEEecccCCCCCCcccchheeEeEeeCHHHcchhhccCCCcCCCeEEecCCCCCccCCCC
Confidence 46677776443 3567899999999743221 222222222222222111 011122344442 3578999
Q ss_pred CCceeeC-CCc--cEEEEeeccc
Q 016647 279 SGGPLLD-SSG--SLIGINTAIY 298 (385)
Q Consensus 279 SGGPlvn-~~G--~VVGI~s~~~ 298 (385)
|||||+. .+| .++||++++.
T Consensus 200 SGgPL~~~~~~~~~l~GI~S~g~ 222 (251)
T 1pyt_D 200 SGGPLNCQADGQWDVRGIVSFGS 222 (251)
T ss_dssp TTCEEEEESSSSEEEEEEEEECC
T ss_pred CCCceEEEECCCEEEEEEEEECC
Confidence 9999985 345 6999999864
No 86
>3beu_A Trypsin, SGT; beta sheets, serine protease, hydrolase, zymogen; HET: BEN; 1.05A {Streptomyces griseus} PDB: 3i78_A 3i77_A 2fmj_A 1os8_A 1oss_A 1sgt_A
Probab=99.30 E-value=6.2e-11 Score=107.65 Aligned_cols=143 Identities=16% Similarity=0.175 Sum_probs=89.0
Q ss_pred EEEEEEEcCCCEEEecccccCCC---CeEEEEecC-------CCeEeeEEEEECCC-------CCeEEEEEcCCCCCCcc
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD-------QSAYDAKIVGFDQD-------KDVAVLRIDAPKDKLRP 215 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d-------g~~~~a~vv~~d~~-------~DlAlLkv~~~~~~~~~ 215 (385)
.|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+.+..++. +||||||++.+. .+++
T Consensus 21 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v-~~~~ 98 (224)
T 3beu_A 21 GCGGALYAQD-IVLTAAHCVSGSGNNTSITATGGVVDLQSSSAVKVRSTKVLQAPGFTKETYGKDWALIKLAQPI-NQPT 98 (224)
T ss_dssp TEEEEEEETT-EEEECGGGSCSSEEBCCCEEEESCSBTTCTTCEEEEEEEEEECTTCCCGGGSCCCEEEEESSCC-CSCC
T ss_pred ceeEEEeeCC-EEEEChhhcCCCCCcceEEEEeeEeecCCCCceEEEEEEEEeCCCcCCCcCCCCEEEEEeCCCC-CCCc
Confidence 4999999987 999999999764 356676642 23344444445543 599999999876 5677
Q ss_pred eecCCCCCCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccC--CCCCCcccEEEEc-----cccCCCCCCcee
Q 016647 216 IPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA--ATGRPIQDVIQTD-----AAINPGNSGGPL 283 (385)
Q Consensus 216 l~l~~~~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~--~~~~~~~~~i~~d-----~~i~~G~SGGPl 283 (385)
+.+.... ...+..++++||..... .......+.-+....+.. .........+... ...|.|+|||||
T Consensus 99 i~l~~~~-~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDsGgPl 177 (224)
T 3beu_A 99 LKIATTT-AYNQGTFTVAGWGANREGGSQQRYLLKANVPFVSDAACRSSSSFILVANEMICAGYDTKQEDTCQGDSGGPM 177 (224)
T ss_dssp CEECCSS-TTSSSEEEEEESSCSSTTCCCCSBCEEEEEEEECHHHHHHHCSSCCCGGGEEEECCSSSSCBCCTTCTTCEE
T ss_pred ccccccc-ccCCCEEEEEecCccCCCCcccceeeEeeCcccCHHHhhhhcCCccCCCCeEEeccCCCCCcCCCCcCCCee
Confidence 8876543 34566899999974422 122333333222221111 0011122344432 357899999999
Q ss_pred eCCC--c--cEEEEeeccc
Q 016647 284 LDSS--G--SLIGINTAIY 298 (385)
Q Consensus 284 vn~~--G--~VVGI~s~~~ 298 (385)
+..+ | .++||++++.
T Consensus 178 ~~~~~~~~~~l~Gi~S~g~ 196 (224)
T 3beu_A 178 FRKDNADEWVQVGIVSWGE 196 (224)
T ss_dssp EEECTTSCEEEEEEEEEES
T ss_pred EEecCCCCEEEEEEeccCC
Confidence 8532 3 6899999864
No 87
>2olg_A Pro-phenoloxidase activating enzyme-I; prophenoloxidase activating factor-I, PPAF-I, serine proteas hydrolase; HET: NAG; 1.70A {Holotrichia diomphalia}
Probab=99.30 E-value=1.3e-10 Score=109.33 Aligned_cols=145 Identities=19% Similarity=0.242 Sum_probs=89.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCC------CeEEEEecC--------------------CCeEeeEEEEECC--------
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA------SDIRVTFAD--------------------QSAYDAKIVGFDQ-------- 197 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~------~~i~V~~~d--------------------g~~~~a~vv~~d~-------- 197 (385)
..|.|.+|+++ ||||+|||+.+. ..+.|++.. ...+..+-+..++
T Consensus 51 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~ 129 (278)
T 2olg_A 51 FACGGSLINNR-YIVTAAHCVAGRVLRVVGALNKVRLGEWNTATDPDCYGAVRVCVPDKPIDLGIEETIQHPDYVDGSKD 129 (278)
T ss_dssp EEEEEEECSSS-EEEECGGGTSTHHHHHTCEEEEEEESCSBTTCSSCEETTTTEECSSCCEEECEEEEEECTTCCTTCSS
T ss_pred eeEEEEEEeCC-EEEEhHHhCCCcccccccceeEEEeCcccCCCCccccccccccCCCCceEEeeEEEEECCCCcCCCCC
Confidence 47999999987 999999999752 346676642 1123333333332
Q ss_pred -CCCeEEEEEcCCC---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCCC----CCc
Q 016647 198 -DKDVAVLRIDAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG----RPI 264 (385)
Q Consensus 198 -~~DlAlLkv~~~~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~----~~~ 264 (385)
.+||||||++.+. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+..... ...
T Consensus 130 ~~nDIALl~L~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~ 209 (278)
T 2olg_A 130 RYHDIALIRLNRQVEFTNYIRPVCLPQPNEEVQVGQRLTVVGWGRTETGQYSTIKQKLAVPVVHAEQCAKTFGAAGVRVR 209 (278)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESCCSSSCCCCSBCEEEEEEBCCGGGGGGGGSSTTCCCC
T ss_pred CCCeEEEEEECCCCcCCCCcCccCcCCCCCCcCCCCEEEEEcCCcCCCCCccchhhcccccccCHHHHHHHhccccccCC
Confidence 4699999998764 246777786543 367899999999974322 122223333222222211110 111
Q ss_pred ccEEEEc----cccCCCCCCceeeCC--Cc--cEEEEeecc
Q 016647 265 QDVIQTD----AAINPGNSGGPLLDS--SG--SLIGINTAI 297 (385)
Q Consensus 265 ~~~i~~d----~~i~~G~SGGPlvn~--~G--~VVGI~s~~ 297 (385)
...+... ...|.|+|||||+-. +| .++||+|++
T Consensus 210 ~~~~Ca~~~~~~~~C~GDSGGPL~~~~~~~~~~l~GIvS~g 250 (278)
T 2olg_A 210 SSQLCAGGEKAKDSCGGDSGGPLLAERANQQFFLEGLVSFG 250 (278)
T ss_dssp TTEEEECCTTCTTCCCCCTTCEEEEEEGGGEEEEEEEEEEC
T ss_pred CceEeeecCCCCeeCCCccCcceEEEcCCCcEEEEEEEEEC
Confidence 2344442 357899999999853 34 599999986
No 88
>3h7o_A Group 3 allergen smipp-S YV6023A04; hydrolase; 1.85A {Sarcoptes scabiei type hominis} SCOP: b.47.1.0
Probab=99.30 E-value=2.7e-11 Score=110.17 Aligned_cols=144 Identities=17% Similarity=0.259 Sum_probs=89.4
Q ss_pred EEEEEEEcCCCEEEecccccCC--CCeEEEEecCC--------CeEeeEEEEEC------CCCCeEEEEEcCCCC----C
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRG--ASDIRVTFADQ--------SAYDAKIVGFD------QDKDVAVLRIDAPKD----K 212 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~--~~~i~V~~~dg--------~~~~a~vv~~d------~~~DlAlLkv~~~~~----~ 212 (385)
.|+|.+|+++ ||||+|||+.+ ...+.|.+... ..+..+.+..+ ..+|||||+++.+.. .
T Consensus 27 ~CgGtLI~~~-~VLTAAHC~~~~~~~~~~v~~g~~~~~~~~~~~~~~v~~i~~h~y~~~~~~~DIALl~L~~~v~~~~~~ 105 (228)
T 3h7o_A 27 TCGGAILSQW-FVLTAAHCVFDQKPETIVIQYESTNLWEDPGKSDPYVSHVYLSFYRQETMENDIAILELSRPLKLDGLK 105 (228)
T ss_dssp EEEEEESSSS-EEEECHHHHTTSCGGGCEEEESCSBTTTBCCEEECCEEEEEESSCBTTTTBTCCEEEEESSCCCCCSSS
T ss_pred EeeeEEeeCC-EEEEcHHhcccCCCCcEEEEecccccccCCCceeeeEEEEEccccCCCCccCCEEEEEECCcccccccc
Confidence 7999999987 99999999954 34566766432 12222323322 346999999987652 4
Q ss_pred CcceecCCCCC-CCCCCEEEEEeCCCCCCC-----ceEEeEEeeeeeeeccCCCC--CCcccEEEEc---cccCCCCCCc
Q 016647 213 LRPIPIGVSAD-LLVGQKVYAIGNPFGLDH-----TLTTGVISGLRREISSAATG--RPIQDVIQTD---AAINPGNSGG 281 (385)
Q Consensus 213 ~~~l~l~~~~~-~~~G~~V~~iG~p~g~~~-----~~~~G~Vs~~~~~~~~~~~~--~~~~~~i~~d---~~i~~G~SGG 281 (385)
+.|+.|..... +..|+.+++.||...... ......+.-+....+..... ......+... ...|.|+|||
T Consensus 106 v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~C~GDsGg 185 (228)
T 3h7o_A 106 SKPAKLPDIEFRPKTGSDVLVSGYGDGQTMDPKDHDLKSAQLTVVDLDECRTKYGPIFLSLQVFCAQKVGVSLESGDAGD 185 (228)
T ss_dssp SCCCBCCCTTCCCCTTCEEEEEECCCSSCSCGGGGBCEEEEEEEECHHHHHHHHTTSCCCSSEEEEECTTCCCCGGGTTC
T ss_pred cccccCCccccCCCCCCeeEEEEEecCCCCCCcccccccceeEEEcHHHHHHHhcCccCCceEEecCCCCCcCCCCCCCC
Confidence 56788865432 678999999999754322 12333333222221111000 1112333332 4568899999
Q ss_pred eeeCCCccEEEEeeccc
Q 016647 282 PLLDSSGSLIGINTAIY 298 (385)
Q Consensus 282 Plvn~~G~VVGI~s~~~ 298 (385)
||+. +++++||++++.
T Consensus 186 Pl~~-~~~l~Gi~S~g~ 201 (228)
T 3h7o_A 186 PTVQ-QDTLVGVAAYFP 201 (228)
T ss_dssp EEEE-TTEEEEEECCCT
T ss_pred ccee-cCeEEEEEeecC
Confidence 9995 778999999864
No 89
>3bg8_A Coagulation factor XIA light chain; protease inhibitor, factor XIA inhibitor complex, covalent inhibitor, alternative splicing, blood coagulation; HET: INH; 1.60A {Homo sapiens} PDB: 3sor_A* 3sos_A* 1zsl_A* 1zpz_A* 1zrk_A* 1xx9_A* 1zjd_A 1zhr_A 1zmj_A* 1zml_A* 1zmn_A* 1zom_A* 1zpb_A* 1zpc_A* 1zsj_A* 1zsk_A* 1ztj_A* 1ztk_A* 1ztl_A* 2fda_A* ...
Probab=99.29 E-value=5.4e-11 Score=109.32 Aligned_cols=146 Identities=20% Similarity=0.254 Sum_probs=90.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK-- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~-- 210 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+||||||++.+.
T Consensus 27 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~ 105 (238)
T 3bg8_A 27 HLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVNY 105 (238)
T ss_dssp EEEEEEEEETT-EEEECGGGGTTCCCGGGEEEECSCSBGGGCCTTSCCEEEEEEEECTTCCCGGGSCCCEEEEESSCCCC
T ss_pred EEEEEEEeeCC-EEEECHHHCCCCCCCceEEEEEeeccCCcCCCCceEEeeEEEEECCCCCCCCCCCcEEEEEECCcccc
Confidence 47999999987 999999999764 457777532 2345555555554 3699999998764
Q ss_pred -CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeecc--CCCCCCcccEEEE-----ccccCC
Q 016647 211 -DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISS--AATGRPIQDVIQT-----DAAINP 276 (385)
Q Consensus 211 -~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~--~~~~~~~~~~i~~-----d~~i~~ 276 (385)
..+.|+.|.... ....++.+++.||..... .......+.-+....+. +.........+.. ....|.
T Consensus 106 ~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 185 (238)
T 3bg8_A 106 TDSQRPISLPSKGERNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDACK 185 (238)
T ss_dssp BTTBCCCBCCCGGGGSSCCCCEEEEESCCSSSSCCCCSBCEEEECCEECHHHHHHHCTTSCCCTTEEEECCTTCCCBCCT
T ss_pred CCCcccCCCCCCccCcCCCCeEEEEecCCCCCCCChhhhhcEeeEEEECHHHhhhhhcCCCCCCCeEeecCCCCCCCcCC
Confidence 246677775432 256789999999974322 12222222222221111 1110112234444 235789
Q ss_pred CCCCceeeCC-Cc--cEEEEeeccc
Q 016647 277 GNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 277 G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
|+|||||+.. +| .++||++++.
T Consensus 186 GDSGgPL~~~~~~~~~l~GI~S~g~ 210 (238)
T 3bg8_A 186 GDSGGPLSCKHNEVWHLVGITSWGE 210 (238)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCCcceEEEECCeEEEEEEEEECC
Confidence 9999999853 34 5999999864
No 90
>2f91_A Hepatopancreas trypsin; trypsin, canonical inhibitor, atomic resolution, hydrolase/hydrolase inhibitor complex; 1.20A {Pontastacus leptodactylus} SCOP: b.47.1.2
Probab=99.29 E-value=8.2e-11 Score=108.03 Aligned_cols=144 Identities=19% Similarity=0.276 Sum_probs=90.8
Q ss_pred EEEEEEEcCCCEEEecccccCCC-----CeEEEEecC-------C--CeEeeEEEEECC-------CCCeEEEEEcCCC-
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGA-----SDIRVTFAD-------Q--SAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~-----~~i~V~~~d-------g--~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (385)
.|+|.+|+++ ||||+|||+.+. ..+.|.+.. + +.+..+-+..++ .+||||||++.+.
T Consensus 29 ~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~ 107 (237)
T 2f91_A 29 FCGASIYNEN-YAITAGHCVYGDDYENPSGLQIVAGELDMSVNEGSEQIITVSKIILHENFDYNLLDNDISLLKLSGSLT 107 (237)
T ss_dssp EEEEEEEETT-EEEECGGGTTTSCTTSCCSEEEEESCSBTTSCCSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESSCCC
T ss_pred eEEEEEeeCC-EEEEcHHhCCCCccCCcccEEEEECCeeccCCCCccEEEEEEEEEECCCCCCCCCCCcEEEEEECCCcc
Confidence 4999999987 999999999653 457777643 1 334555444543 4699999999764
Q ss_pred --CCCcceecCCCCCCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccC--CCCCCcccEEEEc-----cccCC
Q 016647 211 --DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA--ATGRPIQDVIQTD-----AAINP 276 (385)
Q Consensus 211 --~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~--~~~~~~~~~i~~d-----~~i~~ 276 (385)
..+.|+.|.... ...++.++++||..... .......+.-+....+.. .........+... ...|.
T Consensus 108 ~~~~v~picLp~~~-~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~~C~ 186 (237)
T 2f91_A 108 FNDNVAPIALPEQG-HTATGDVIVTGWGTTSEGGNTPDVLQKVTVPLVSDEDCRADYGADEILDSMICAGVPEGGKDSCQ 186 (237)
T ss_dssp CBTTBCCCBCCCTT-CCCCSEEEEEESCCSSTTCCCCSBCEEEEEEEECHHHHHHHHCTTTSCTTEEEECCTTCCCBCCT
T ss_pred cCCceeeccCCCCC-CCCCCcEEEEECCcCCCCCCccceeeEEEEeEcCHHHhhhhhCCCCcCCCeEEEecCCCCCCCCC
Confidence 246788886543 46789999999974321 122333333222221111 0011122344442 35789
Q ss_pred CCCCceeeCCCc---cEEEEeeccc
Q 016647 277 GNSGGPLLDSSG---SLIGINTAIY 298 (385)
Q Consensus 277 G~SGGPlvn~~G---~VVGI~s~~~ 298 (385)
|+|||||+..++ .++||++++.
T Consensus 187 GDSGgPL~~~~~~~~~l~Gi~S~g~ 211 (237)
T 2f91_A 187 GDSGGPLAASDTGSTYLAGIVSWGY 211 (237)
T ss_dssp TCTTCEEEECTTSSCEEEEEEEEES
T ss_pred CcCCCCeEEecCCCEEEEEEEEecC
Confidence 999999985332 7999999864
No 91
>3mhw_U Urokinase-type plasminogen activator; hydrolase, blood coagulation, fibrinolysis, plasminogen activation; HET: ABV; 1.45A {Homo sapiens} SCOP: b.47.1.2 PDB: 1w10_U* 1w11_U* 1w12_U* 1w13_U* 1w14_U* 1w0z_U* 2vip_A* 1f5k_U 1f5l_A* 1f92_A* 2r2w_U* 2vin_A* 2vio_A* 1ejn_A* 2viq_A* 2viv_A* 2viw_A* 1vja_U* 1vj9_U* 1sc8_U* ...
Probab=99.29 E-value=1.5e-10 Score=106.47 Aligned_cols=146 Identities=18% Similarity=0.228 Sum_probs=90.7
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC---------CeEeeEEEEECCC---------CCeEEEEEcCC-
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFDQD---------KDVAVLRIDAP- 209 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d~~---------~DlAlLkv~~~- 209 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+... ..+..+-+..++. +|||||+++.+
T Consensus 29 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 107 (247)
T 3mhw_U 29 YVCGGSLISPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 107 (247)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEEC-CCEESCCEEEEEECTT
T ss_pred eEEEEEEEeCC-EEEEcHHhCcCCCCCccEEEEeccccccCCCCCCEEEEEEEEEECCCCCCCcCCCCCcEEEEEeCCcc
Confidence 47999999987 999999999653 3467776432 2344554444432 59999999875
Q ss_pred ------CCCCcceecCCC-CCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCC--C-CCCcccEEEEc--
Q 016647 210 ------KDKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--T-GRPIQDVIQTD-- 271 (385)
Q Consensus 210 ------~~~~~~l~l~~~-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~-~~~~~~~i~~d-- 271 (385)
...+.++.|... ..+..|+.+++.||..... .......+.-+....+... . .......+...
T Consensus 108 ~~~~~~~~~v~pi~lp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 187 (247)
T 3mhw_U 108 GRCAQPSRTIQTISLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 187 (247)
T ss_dssp SCCCCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTGGGCCTTEEEEECT
T ss_pred ccccccCCcccccccCCCcCCCCCCCEEEEEecCCcCCCCcccchhheeeEEEEEChHHhcCccccCCcCCCCeEecCCC
Confidence 135667777543 3467799999999975422 1233333333332222211 0 01112344432
Q ss_pred ---cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 272 ---~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+.. +| .++||++++.
T Consensus 188 ~~~~~~C~GDSGgPl~~~~~~~~~l~Gi~S~g~ 220 (247)
T 3mhw_U 188 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGR 220 (247)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCCccCCCCCCCeEEEEECCCEEEEEEEEECC
Confidence 356899999999852 34 5999999864
No 92
>3gyl_B Prostasin; ENAC, zymogen, divalent cation, channel activatin membrane, disulfide bond, glycoprotein, hydrolase, membrane protease, secreted; 1.30A {Homo sapiens} PDB: 3gym_A 3e16_B* 3e0p_B* 3e0n_B* 3e1x_B 3fvf_B* 3dfj_A 3dfl_A*
Probab=99.28 E-value=4.8e-11 Score=110.80 Aligned_cols=147 Identities=19% Similarity=0.217 Sum_probs=90.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCC---CCeEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC-
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (385)
...|+|.+|+++ ||||+|||+.+ ...+.|.+... ..+..+-+..++ .+||||||++.+.
T Consensus 23 ~~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~ 101 (261)
T 3gyl_B 23 VHVCGGSLVSEQ-WVLSAAHCFPSEHHKEAYEVKLGAHQLDSYSEDAKVSTLKDIIPHPSYLQEGSQGDIALLQLSRPIT 101 (261)
T ss_dssp EEEEEEEECSSS-EEEECGGGSCTTSCGGGEEEEESCSBTTSCCSSCEEECEEEEEECTTCCSTTCSCCCEEEEESSCCC
T ss_pred ceEEEEEEEcCC-EEEECHHHCCCCCCcccEEEEeCceeccCCCCCceEEEEEEEEECCCcCCCCCCCcEEEEEECCCcc
Confidence 347999999987 99999999953 34577776432 234444455554 3499999998764
Q ss_pred --CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-------CceEEeEEeeeeeeeccC--C-------CCCCcccEEEEc
Q 016647 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISSA--A-------TGRPIQDVIQTD 271 (385)
Q Consensus 211 --~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-------~~~~~G~Vs~~~~~~~~~--~-------~~~~~~~~i~~d 271 (385)
..+.++.|.... .+..|+.+++.||..... .......+.-+....+.. . ........+...
T Consensus 102 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~Ca~ 181 (261)
T 3gyl_B 102 FSRYIRPISLPAAQASFPNGLHCTVTGWGHVAPSVSLLTPKPLQQLEVPLISRETCNSLYNIDAKPEEPHFVQEDMVCAG 181 (261)
T ss_dssp CBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCCCTTCBCEEEEEEEECHHHHHHHHTTTCCTTCCCCCCTTEEEES
T ss_pred CCCceeccCCCCcccCCCCCCEEEEEecCCCCCCCCccCCccceEEEEEEECHHHhhhhhcccccccccccccCCeEeeC
Confidence 246677775432 356799999999974321 122333333222221110 0 001122344442
Q ss_pred -----cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 272 -----AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 272 -----~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+.. +| .++||++++.
T Consensus 182 ~~~~~~~~C~GDsGgPl~~~~~~~~~lvGI~S~g~ 216 (261)
T 3gyl_B 182 YVEGGKDACQGDSGGPLSCPVEGLWYLTGIVSWGD 216 (261)
T ss_dssp CSSSSCBCCTTTTTCEEEEEETTEEEEEEEECCCC
T ss_pred CCCCCCccCCCCCCCeeEEEeCCEEEEEEEEecCC
Confidence 357899999999853 34 5999999863
No 93
>1yc0_A Hepatocyte growth factor activator; hydrolase/inhibitor, hydrolase-inhibitor complex; 2.60A {Homo sapiens} PDB: 1ybw_A 2r0k_A
Probab=99.28 E-value=1.4e-10 Score=109.39 Aligned_cols=147 Identities=18% Similarity=0.235 Sum_probs=92.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC---------CeEeeEEEEEC--------CCCCeEEEEEcCC-
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFD--------QDKDVAVLRIDAP- 209 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d--------~~~DlAlLkv~~~- 209 (385)
...|.|.+|+++ ||||+|||+.+. ..+.|.+... +.+..+.+..+ ..+|||||+++.+
T Consensus 57 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~~ 135 (283)
T 1yc0_A 57 DSFCAGSLVHTC-WVVSAAHCFSHSPPRDSVSVVLGQHFFNRTTDVTQTFGIEKYIPYTLYSVFNPSDHDLVLIRLKKKG 135 (283)
T ss_dssp TEEEEEEEEETT-EEEECGGGGTTCCCGGGEEEEESCCBTTCCCSSCEEECEEEEEECTTCCTTSTTTTCCEEEEECCBT
T ss_pred CcEEEEEEeeCC-EEEECHHHcCCCCCCceEEEEEeeeecccCCCceEEEeeEEEEecCccccCCCCCCceEEEEeCCCc
Confidence 347999999987 999999999764 4578877432 23334433333 2469999999875
Q ss_pred ---C---CCCcceecCCC-CCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc--
Q 016647 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD-- 271 (385)
Q Consensus 210 ---~---~~~~~l~l~~~-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d-- 271 (385)
. ..+.|+.|... ..+..|+.+++.||..... .......+.-+....+... .. ......+...
T Consensus 136 ~~~v~~~~~v~picLp~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~iCa~~~ 215 (283)
T 1yc0_A 136 DRCATRSQFVQPICLPEPGSTFPAGHKCQIAGWGHLDENVSGYSSSLREALVPLVADHKCSSPEVYGADISPNMLCAGYF 215 (283)
T ss_dssp TBSSCCBTTBCCCBCCCTTCCCCTTCEEEEEESSCSBTTBCSCCSBCEEEEEEBCCHHHHTSTTTTGGGCCTTEEEESCS
T ss_pred cccccccCceeeeECCCCcCCCCCCCEEEEEEeCccCCCCCccCchheEeEEEEECHHHhcCccccCCcCCCCEEeeCCC
Confidence 1 34667777643 3456899999999974321 2233444433333222211 00 1112345442
Q ss_pred ---cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 272 ---AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 272 ---~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+.. +| .++||++++.
T Consensus 216 ~~~~~~C~GDSGgPL~~~~~g~~~l~GIvS~g~ 248 (283)
T 1yc0_A 216 DCKSDACQGDSGGPLACEKNGVAYLYGIISWGD 248 (283)
T ss_dssp SSCCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCCccCCCCCCCceEEEECCcEEEEEEEEECC
Confidence 357899999999853 45 5999999864
No 94
>1ddj_A Plasminogen; catalytic domain, blood clotting; 2.00A {Homo sapiens} SCOP: b.47.1.2 PDB: 1bml_A 1l4d_A 1l4z_A 1bui_A* 1rjx_B 1qrz_A
Probab=99.28 E-value=2.9e-10 Score=105.11 Aligned_cols=147 Identities=17% Similarity=0.247 Sum_probs=91.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC---------CeEeeEEEEECC-CCCeEEEEEcCCC---CCCc
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFDQ-DKDVAVLRIDAPK---DKLR 214 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~~ 214 (385)
...|.|.+|+++ ||||+|||+.+. ..+.|.+... +.+...-+..++ .+||||||++.+. +.+.
T Consensus 41 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~~~~hp~~~DIALl~L~~~v~~~~~v~ 119 (247)
T 1ddj_A 41 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 119 (247)
T ss_dssp CEEEEEEEEETT-EEEECGGGGTTCSCGGGCEEEESCSBSSSCCTTCEEEEEEEEEECTTSCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEeeCC-EEEEcHHHcCCCCCCccEEEEEcccccCccCCceEEEEeeeEEcCCCCCcEEEEEeCCceeeCCCEE
Confidence 347999999987 999999999754 4567776432 223333334443 5799999998764 3466
Q ss_pred ceecCCCC-CCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCC---CCCCcccEEEEc-----cccCCCCCCc
Q 016647 215 PIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAA---TGRPIQDVIQTD-----AAINPGNSGG 281 (385)
Q Consensus 215 ~l~l~~~~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~d-----~~i~~G~SGG 281 (385)
|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+... ...|.|+|||
T Consensus 120 picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~~~C~GDSGg 199 (247)
T 1ddj_A 120 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDAGG 199 (247)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCCSSSTTTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeecCCcccCCCCCCEEEEEEcccCCCCCCCccceEEeeeecCHHHhcchhccCCCCcCCeEeecCCCCCCccccCcCcC
Confidence 77776433 356789999999975422 1233333332222222110 111122344442 3578999999
Q ss_pred eeeCC-Cc--cEEEEeeccc
Q 016647 282 PLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 282 Plvn~-~G--~VVGI~s~~~ 298 (385)
||+-. +| .++||++++.
T Consensus 200 PL~~~~~~~~~l~GI~S~g~ 219 (247)
T 1ddj_A 200 PLVCFEKDKYILQGVTSWGL 219 (247)
T ss_dssp EEEEECSSSEEEEEEECGGG
T ss_pred cEEEEECCcEEEEEEEEECC
Confidence 99842 33 5999999864
No 95
>1rtf_B (TC)-T-PA, two chain tissue plasminogen activator; serine protease, fibrinolytic enzymes; HET: BEN; 2.30A {Homo sapiens} SCOP: b.47.1.2 PDB: 1a5h_A* 1bda_A* 1a5i_A*
Probab=99.28 E-value=2.6e-10 Score=105.46 Aligned_cols=146 Identities=15% Similarity=0.203 Sum_probs=91.5
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAP--- 209 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~--- 209 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+.. .+.+..+-+..++ .+|||||+++.+
T Consensus 30 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~~~~ 108 (252)
T 1rtf_B 30 FLCGGILISSC-WILSAAHCFQERFPPHHLTVILGRTYRVVPGEEEQKFEVEKYIVHKEFDDDTYDNDIALLQLKSDSSR 108 (252)
T ss_dssp EEEEEEECSSS-EEEECGGGGTTCCCGGGEEEEESCSBSSSCCTTCEEEEEEEEEECTTCCTTTCTTCCEEEEECCSSSC
T ss_pred EEEEEEEEeCC-EEEECHHHCCCCCCcccEEEEeCcccccCCCCcceEEEEEEEEeCCCCCcCCCCCCEEEEEECCcccc
Confidence 47999999987 999999999753 457777743 2234455444443 469999999876
Q ss_pred -C---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC---CCCcccEEEEc----
Q 016647 210 -K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT---GRPIQDVIQTD---- 271 (385)
Q Consensus 210 -~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~---~~~~~~~i~~d---- 271 (385)
. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+.... .......+...
T Consensus 109 ~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~ 188 (252)
T 1rtf_B 109 CAQESSVVRTVCLPPADLQLPDWTECELSGYGKHEALSPFYSERLKEAHVRLYPSSRCTSQHLLNRTVTDNMLCAGDTRS 188 (252)
T ss_dssp CSCCBTTBCCCBCCCTTCCCCTTCEEEEEESCCSSTTCSSCCSBCEEEEEEECCGGGSSTTTTTTCCCCTTEEEEECCC-
T ss_pred ccccCCceeceeCCCccccCCCCCEEEEEEcCCCCCCCccccchheEeeeEEecHHHhhhhhccCCCCCCCEEEecCCCC
Confidence 2 246677776443 356789999999974322 12233333322222221110 01112344432
Q ss_pred -------cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 272 -------AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 272 -------~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+-. +| .++||++++.
T Consensus 189 ~~~~~~~~~~C~GDsGgPL~~~~~~~~~l~Gi~S~g~ 225 (252)
T 1rtf_B 189 GGPQANLHDACQGDSGGPLVCLNDGRMTLVGIISWGL 225 (252)
T ss_dssp -----CCCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCccCCCCccccCCCcCceEEEeCCcEEEEEEEEEcC
Confidence 457899999999853 45 6999999864
No 96
>2jkh_A Activated factor XA heavy chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_A* 2vvc_A* 2vvu_A* 2vvv_A* 2vwl_A* 2vwm_A* 2vwn_A* 2vwo_A* 2xbv_A* 1c5m_D 2vh0_A* 1ezq_A* 1f0s_A* 1ksn_A* 1f0r_A* 1lpk_B* 1lpz_B* 1lqd_B* 1nfu_A* 1nfw_A* ...
Probab=99.28 E-value=3.2e-11 Score=111.02 Aligned_cols=147 Identities=19% Similarity=0.216 Sum_probs=92.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
...|+|.+|+++ ||||+|||+.+...+.|.+.+. ..+..+.+..++ .+|||||+++.+. .
T Consensus 24 ~~~CgGtLIs~~-~VLTAAhC~~~~~~~~V~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 102 (241)
T 2jkh_A 24 EGFCGGTILSEF-YILTAAHCLYQAKRFKVRVGDRNTEQEEGGEAVHEVEVVIKHNRFTKETYDFDIAVLRLKTPITFRM 102 (241)
T ss_dssp CEEEEEEECSSS-EEEECGGGGGSCSSCEEEESCSBTTCCCSCCEEECEEEEEECTTCBTTTTBTCCEEEEESSCCCCBT
T ss_pred CcEEEEEEeeCC-EEEEcHHHcCCCCcEEEEECCccCCCCCCCcEEEEeEEEEeCCCCCCCCCCCcEEEEEECCcccCCC
Confidence 457999999987 9999999998877788887532 234445444443 3599999998764 2
Q ss_pred CCcceecCCCC----CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCC-CCCcccEEEEc-----cccCC
Q 016647 212 KLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAAT-GRPIQDVIQTD-----AAINP 276 (385)
Q Consensus 212 ~~~~l~l~~~~----~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~d-----~~i~~ 276 (385)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.... .......+... ...|.
T Consensus 103 ~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~ 182 (241)
T 2jkh_A 103 NVAPACLPERDWAESTLMTQKTGIVSGFGRTHEKGEQSTRLKMLEVPYVDRNSCKLSSSFIITQNMFCAGYDTKQEDACQ 182 (241)
T ss_dssp TBCCCBCCCHHHHHHHTTTSSEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHCSSCCCTTEEEESCSSSSCBCCT
T ss_pred CEeeeEcCCCCcccccccCCCeEEEEecCCCCCCCCcCccccEeeeccccHHHhcccccCcCCCCeEEeeCCCCCCccCc
Confidence 45677775422 145789999999974322 12223333322222111100 01112344432 35789
Q ss_pred CCCCceeeCC-Cc--cEEEEeeccc
Q 016647 277 GNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 277 G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
|+|||||+.. +| .++||++++.
T Consensus 183 GDsGgPl~~~~~~~~~l~GI~S~g~ 207 (241)
T 2jkh_A 183 GDSGGPHVTRFKDTYFVTGIVSWGE 207 (241)
T ss_dssp TTTTCEEEEEETTEEEEEEEEEECS
T ss_pred CcCCCeeEEEECCEEEEEEEEEECC
Confidence 9999999853 44 5999999864
No 97
>3tvj_B Mannan-binding lectin serine protease 2 B chain; in vitro evolution, specific inhibitor, allostery, hydrolase; 1.28A {Homo sapiens} PDB: 4fxg_H*
Probab=99.26 E-value=8.5e-11 Score=107.67 Aligned_cols=145 Identities=18% Similarity=0.201 Sum_probs=90.2
Q ss_pred eEEEEEEEcCCCEEEecccccCC----CCeEEEEecCC-------CeEeeEEEEECC--------CCCeEEEEEcCCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-------SAYDAKIVGFDQ--------DKDVAVLRIDAPK-- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~dg-------~~~~a~vv~~d~--------~~DlAlLkv~~~~-- 210 (385)
..|+|.+|+++ ||||+|||+.+ ...+.|.+... ..+..+.+..++ .+||||||++.+.
T Consensus 22 ~~CgGtLI~~~-~VLTAAhC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~L~~~v~~ 100 (242)
T 3tvj_B 22 TTAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVI 100 (242)
T ss_dssp EEEEEEEETTT-EEEECHHHHSTTTTCSSCCEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCSTTCCEEEEESSCCCC
T ss_pred CcEEEEEecCC-EEEECHHHCCCCCCCcceEEEEeccccccCcccceeeEEEEEeCCCCCCCCCCcCcEEEEEECCcccc
Confidence 47999999987 99999999953 45577776442 223344344432 4699999998764
Q ss_pred -CCCcceecCCCCC---CCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCC-------CCCCcccEEEEc----
Q 016647 211 -DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAA-------TGRPIQDVIQTD---- 271 (385)
Q Consensus 211 -~~~~~l~l~~~~~---~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~-------~~~~~~~~i~~d---- 271 (385)
..+.|+.|..... +..|+.+++.||..... .......+.-+....+... ........+...
T Consensus 101 ~~~v~picLp~~~~~~~~~~~~~~~~~GwG~~~~~~~~~~l~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~~Ca~~~~~ 180 (242)
T 3tvj_B 101 NSNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESG 180 (242)
T ss_dssp BTTBCCCBCCCTTGGGGSCTTCEEEEEESCCCTTSSCCSBCEEEEEEBCCHHHHHHHHHSTTSCTTCCCTTEEEESCTTC
T ss_pred CCCEecCCcCCCcccccccCCCEEEEEEeCCCCCCCcCccceEEeeeEEcHHHHHHhhccCCcccccccCCeEEECCCCC
Confidence 3567888865442 67899999999975432 1222333332222111100 001122344442
Q ss_pred -cccCCCCCCceeeC---CCc--cEEEEeecc
Q 016647 272 -AAINPGNSGGPLLD---SSG--SLIGINTAI 297 (385)
Q Consensus 272 -~~i~~G~SGGPlvn---~~G--~VVGI~s~~ 297 (385)
...|.|+|||||+. .+| .++||++++
T Consensus 181 ~~~~C~GDsGgPL~~~~~~~~~~~l~Gi~S~g 212 (242)
T 3tvj_B 181 GKDSCRGDSGGALVFLDSETERWFVGGIVSWG 212 (242)
T ss_dssp CSBCCTTCTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred CCccccCCCCCeEEEEeCCCCcEEEEEEEEeC
Confidence 45789999999984 233 499999986
No 98
>2jde_A Urokinase-type plasminogen activator; plasminogen activation, EGF-like domain, blood coagulation, inhibitor complex, UPA, kringle, zymogen; 2.2A {Homo sapiens} PDB: 2vnt_A*
Probab=99.26 E-value=2.3e-10 Score=107.35 Aligned_cols=146 Identities=17% Similarity=0.201 Sum_probs=90.8
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC---------CeEeeEEEEECC---------CCCeEEEEEcCC-
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFDQ---------DKDVAVLRIDAP- 209 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d~---------~~DlAlLkv~~~- 209 (385)
..|+|.+|+++ ||||+|||+.+. ..+.|.+... ..+..+-+..++ .+|||||+++.+
T Consensus 52 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~~DIALl~L~~~~ 130 (276)
T 2jde_A 52 YVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENLILHKDYSADTLAHHNDIALLKIRSKE 130 (276)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTSCCGGGEEEEESCCBSSSCCTTCEEEEEEEEEECTTCEECSSCEESCCEEEEEECTT
T ss_pred eeeeeEEeeCC-EEEEcHHhccCCCCcccEEEEecccccCCCCCCcEEEEEEEEEECCCCCCCCCcCCCcEEEEEeCCcc
Confidence 47999999987 999999999653 3567776432 234444444443 259999999875
Q ss_pred ---C---CCCcceecCCC-CCCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCC--C-CCCcccEEEEc--
Q 016647 210 ---K---DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA--T-GRPIQDVIQTD-- 271 (385)
Q Consensus 210 ---~---~~~~~l~l~~~-~~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~--~-~~~~~~~i~~d-- 271 (385)
. ..+.++.|... ..+..|+.+++.||..... .......+.-+....+... . .......+...
T Consensus 131 ~~~~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~ 210 (276)
T 2jde_A 131 GRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKLISHRECQQPHYYGSEVTTKMLCAADP 210 (276)
T ss_dssp SCCCCCBTTBCCCBCCBTTBCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEEECHHHHTSTTTTGGGSCTTEEEEECT
T ss_pred ccccccCCceEccCCCCcccCCCCCCEEEEEECCccCCCCcccchhhhhceecccChHHhCcccccCccCCCCeEEecCC
Confidence 1 35667777543 3467799999999975422 1223333333332222211 0 01122344432
Q ss_pred ---cccCCCCCCceeeC-CCc--cEEEEeeccc
Q 016647 272 ---AAINPGNSGGPLLD-SSG--SLIGINTAIY 298 (385)
Q Consensus 272 ---~~i~~G~SGGPlvn-~~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+. .+| .++||+|++.
T Consensus 211 ~~~~~~C~GDSGgPL~~~~~~~~~l~GI~S~g~ 243 (276)
T 2jde_A 211 QWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGR 243 (276)
T ss_dssp TSCCBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCCcccccccCcceEEEeCCcEEEEEEEEECC
Confidence 35789999999985 234 5999999864
No 99
>1t8o_A Chymotrypsin A; chymotrypsin, serine proteinase, BPTI, protein-protein interaction, non-cognate binding, S1 pocket, primary specificity; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1cgi_E 1cgj_E 1chg_A 1ex3_A 1acb_E 1gl0_E 1gl1_A 1gcd_A* 1oxg_A 1k2i_1 1p2n_A 1p2o_A 1p2q_A 1t7c_A 1t8l_A 1t8m_A 1t8n_A 1p2m_A 2cga_A 2y6t_A ...
Probab=99.26 E-value=8.3e-11 Score=108.66 Aligned_cols=146 Identities=17% Similarity=0.181 Sum_probs=89.0
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
...|+|.+|+++ ||||+|||+.+ ....|.+.. .+.+..+-+..++ .+||||||++.+. .
T Consensus 39 ~~~CgGtLI~~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 116 (245)
T 1t8o_A 39 FHFCGGSLINEN-WVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 116 (245)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CeEEEEEEeeCC-EEEEcHHhCcC-CCcEEEEeeeecCCCCCCcEEEEEEEEEeCCCCCCCCCCCCEEEEEECCCCcCCC
Confidence 347999999987 99999999976 344555532 1234444444443 4699999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCCC-CCCcccEEEE---ccccCCCCCC
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAAT-GRPIQDVIQT---DAAINPGNSG 280 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~~-~~~~~~~i~~---d~~i~~G~SG 280 (385)
.+.|+.|.... .+..|+.+++.||..... .......+.-+....+.... .......+.. ....|.|+||
T Consensus 117 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~C~GDSG 196 (245)
T 1t8o_A 117 TVSAVCLPSASDDFAAGTTCVTTGWGLTRYTNANTPDRLQQASLPLLSNTNCKKYWGTKIKDAMICAGASGVSSCMGDSG 196 (245)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCCSCC--CCCCSBCEEEEEEEECHHHHHHHHGGGCCTTEEEEECSSCBCCTTCTT
T ss_pred ceeeeECCCCccCCCCCCEEEEEEeCCCCCCCCCCcchheEEEEeeEcchhhhHhhcCcCCCceEEccCCCCccCcccCc
Confidence 46677776433 356899999999974321 12223333222221111000 0011223333 2357899999
Q ss_pred ceeeCC-Cc--cEEEEeeccc
Q 016647 281 GPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~-~G--~VVGI~s~~~ 298 (385)
|||+.. +| .++||+|++.
T Consensus 197 gPL~~~~~~~~~l~GI~S~g~ 217 (245)
T 1t8o_A 197 GPLVCKKNGAWTLVGIVSWGS 217 (245)
T ss_dssp CEEEEEETTEEEEEEEEEECC
T ss_pred CCEEEEECCEEEEEEEEEeCC
Confidence 999853 34 7999999864
No 100
>1fon_A Procarboxypeptidase A-S6; truncated zymogen E, serine protease; 1.70A {Bos taurus} SCOP: b.47.1.2 PDB: 1pyt_C
Probab=99.25 E-value=1.4e-11 Score=113.25 Aligned_cols=146 Identities=19% Similarity=0.222 Sum_probs=90.0
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC--C---------eEeeEEEEECC-------C--CCeEEEEEcCCC-
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ--S---------AYDAKIVGFDQ-------D--KDVAVLRIDAPK- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg--~---------~~~a~vv~~d~-------~--~DlAlLkv~~~~- 210 (385)
..|+|.+|+++ ||||+|||+.+...+.|.+... . .+.++-+..++ . +|||||+++.+.
T Consensus 26 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~v~ 104 (240)
T 1fon_A 26 HTCGGSLIAPD-WVVTAGHCISTSRTYQVVLGEYDRSVLEGSEQVIPINAGDLFVHPLWNSNCVACGNDIALVKLSRSAQ 104 (240)
T ss_dssp EEECCEEEETT-EEEECGGGCCTTSCEEEEEEEEETTEEEEEEEEEEECTTSEEECTTCCTTCGGGCCCCEEEECSSCCC
T ss_pred eEEEEEEeeCC-EEEECHHHCCCCCceEEEeeeeeccccCCCceeEeeeeeEEEECCCCcCCCccCCCCEEEEEecCccc
Confidence 47999999987 9999999998877777776431 1 11111122332 2 899999998764
Q ss_pred --CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCC--CC-CCcccEEEEc---cccCC
Q 016647 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TG-RPIQDVIQTD---AAINP 276 (385)
Q Consensus 211 --~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~-~~~~~~i~~d---~~i~~ 276 (385)
+.+.|+.|.... .+..|+.+++.||..... .......+..+....+... .+ ......+... ...|.
T Consensus 105 ~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~Ca~~~~~~~C~ 184 (240)
T 1fon_A 105 LGDKVQLANLPPAGDILPNEAPCYISGWGRLYTGGPLPDKLQQALLPTVDYEHCSQWDWWGITVKKTMVCAGGDTRSGCN 184 (240)
T ss_dssp CTTSCCCCBCCCTTCCCCTTCCCEEEECTTCCCSSSCCSBCEEEECCEECHHHHTSTTTTGGGCCTTEEEECCSSSCSTT
T ss_pred cCCcccccCCCCcccCCCCCCeEEEEEEeEcCCCCCCChhheEEEEeeeCHHHhccceecCCccccceEeecCCCCcccC
Confidence 346777776543 356789999999974321 1222333322222222111 00 0112344432 35689
Q ss_pred CCCCceeeCC--Cc--cEEEEeeccc
Q 016647 277 GNSGGPLLDS--SG--SLIGINTAIY 298 (385)
Q Consensus 277 G~SGGPlvn~--~G--~VVGI~s~~~ 298 (385)
|+|||||+-. +| .++||++++.
T Consensus 185 GDsGgPL~~~~~~~~~~l~Gi~S~g~ 210 (240)
T 1fon_A 185 GDSGGPLNCPAADGSWQVHGVTSFVS 210 (240)
T ss_dssp SCTTCEEEEECSSSCEEEEEEEEECC
T ss_pred CCCCCeEEeEcCCCCEEEEEEEEEcC
Confidence 9999999842 56 8999999764
No 101
>2qy0_B Complement C1R subcomponent; serine protease, beta barrel, complement pathway like domain, glycoprotein, hydrolase, hydroxylation, immune response; 2.60A {Homo sapiens} SCOP: b.47.1.2
Probab=99.25 E-value=6.6e-11 Score=108.78 Aligned_cols=146 Identities=17% Similarity=0.196 Sum_probs=88.6
Q ss_pred eEEEEEEEcCCCEEEecccccCC-------CCeEEEEecCC--------CeEeeEEEEECC----------CCCeEEEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQ--------SAYDAKIVGFDQ----------DKDVAVLRI 206 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~-------~~~i~V~~~dg--------~~~~a~vv~~d~----------~~DlAlLkv 206 (385)
..|.|.+|+++ ||||+|||+.. ...+.|.+... ..+..+-+..++ .+||||||+
T Consensus 22 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 100 (242)
T 2qy0_B 22 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 100 (242)
T ss_dssp SEEEEEEETTT-EEEECHHHHSCSSCCC----CCEEEESCSBHHHHHHHCCCCEEEEEECTTCCTTCSSCCTTCCEEEEE
T ss_pred CCEEEEEEeCC-EEEEcHHhccccccccCCCceEEEEEeeccccccccccceeEEEEEECCCCccCcCCCCCCcEEEEEE
Confidence 36999999987 99999999963 23466776542 123444444443 349999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCCEEEEEeCCCCCC---CceEEeEEeeeeeeeccCC------CCCCcccEEEEc--
Q 016647 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAA------TGRPIQDVIQTD-- 271 (385)
Q Consensus 207 ~~~~---~~~~~l~l~~~~~-~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~~------~~~~~~~~i~~d-- 271 (385)
+.+. ..+.|+.|..... +..|+.+++.||..... .......+.-+....+... ........+...
T Consensus 101 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~ 180 (242)
T 2qy0_B 101 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 180 (242)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCCCSSSCCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCCCcCCCCcceeecCCCccccCCCCeEEEEeeccCCCcCCccceEEEEEEeCHHHHHHHhccccccccCCCCEEeccCC
Confidence 8764 2467777764432 46789999999975432 1223333332222111100 001112345442
Q ss_pred ---cccCCCCCCceeeCCC---c--cEEEEeeccc
Q 016647 272 ---AAINPGNSGGPLLDSS---G--SLIGINTAIY 298 (385)
Q Consensus 272 ---~~i~~G~SGGPlvn~~---G--~VVGI~s~~~ 298 (385)
...|.|+|||||+..+ | .++||+|++.
T Consensus 181 ~~~~~~C~GDSGgPl~~~~~~~~~~~l~Gi~S~g~ 215 (242)
T 2qy0_B 181 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 215 (242)
T ss_dssp TCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred CCCCccccCCCCCcEEEEECCCCeEEEEEEEEECC
Confidence 3578999999998532 2 4999999864
No 102
>1fiw_A Beta-acrosin heavy chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2 PDB: 1fiz_A*
Probab=99.25 E-value=5.3e-10 Score=106.02 Aligned_cols=146 Identities=19% Similarity=0.262 Sum_probs=90.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC--------------CeEeeEEEEECC-------CCCeEEEEEc
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ--------------SAYDAKIVGFDQ-------DKDVAVLRID 207 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg--------------~~~~a~vv~~d~-------~~DlAlLkv~ 207 (385)
..|.|.||+++ ||||+|||+.+. ..+.|.+... +.+..+-+..++ .+||||||++
T Consensus 30 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~nDIALl~L~ 108 (290)
T 1fiw_A 30 HVCGGSLLNSQ-WLLTAAHCFRIKKKVTDWRLIFGAKEVEWGTNKPVKPPLQERYVEKIIIHEKYSASSEANDIALMKIT 108 (290)
T ss_dssp EEEEEEEEETT-EEEECGGGGSSCCSGGGEEEEESCSBCCTTCCSCCCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEEE
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEecceEEeccCCCcCCCCceEEEEEEEEECCCCCCCCCCCCEEEEEEC
Confidence 46999999987 999999999753 3466766321 223344444443 3699999998
Q ss_pred CCC---CCCcceecCCCC--CCCCCCEEEEEeCCCCCC------CceEEeEEeeeeeeeccCC---CCCCcccEEEEc--
Q 016647 208 APK---DKLRPIPIGVSA--DLLVGQKVYAIGNPFGLD------HTLTTGVISGLRREISSAA---TGRPIQDVIQTD-- 271 (385)
Q Consensus 208 ~~~---~~~~~l~l~~~~--~~~~G~~V~~iG~p~g~~------~~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~d-- 271 (385)
.+. +.+.|+.|.... ....|+.+++.||..... .......+.-+....+... ........+...
T Consensus 109 ~~v~~~~~v~PicLp~~~~~~~~~~~~~~v~GWG~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~i~~~~iCag~~ 188 (290)
T 1fiw_A 109 PPVTCGHFIGPGCLPQFRAGPPRVPQTCWVAGWGFLQENARRTSPMLQEARVDLIDLGLCNSTRWYNGRIRSTNVCAGYP 188 (290)
T ss_dssp SCCCCBTTBCCCBCCCTTCCSCCSSCEEEEEESCCSSTTCSSCCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEEECT
T ss_pred CccccCCccccccCCCccccCcCCCCeEEEEEeccCCCCCCCCCceeeEEEEEEecHHHhccccccCCcCCCCEEEEecC
Confidence 764 346677776432 235689999999974321 1233334433333222211 111123445442
Q ss_pred ---cccCCCCCCceeeCC---Cc--cEEEEeeccc
Q 016647 272 ---AAINPGNSGGPLLDS---SG--SLIGINTAIY 298 (385)
Q Consensus 272 ---~~i~~G~SGGPlvn~---~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+-. +| .++||+|++.
T Consensus 189 ~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~ 223 (290)
T 1fiw_A 189 EGKIDTCQGDSGGPLMCKDSAENSYVVVGITSWGV 223 (290)
T ss_dssp TCSSBCCTTCTTCEEEEECSSSSCEEEEEEEEECS
T ss_pred CCCCeeCCCCCchheEEEECCCCCEEEEEEEEECC
Confidence 357899999999843 23 5999999864
No 103
>2wph_S Coagulation factor IXA heavy chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpj_S* 2wpk_S* 2wpl_S* 2wpi_S* 2wpm_S 3lc3_A* 1rfn_A* 3lc5_A* 3kcg_H* 1x7a_C* 1pfx_C*
Probab=99.24 E-value=5.1e-11 Score=109.14 Aligned_cols=146 Identities=21% Similarity=0.208 Sum_probs=89.3
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC---------CeEeeEEEEECC---------CCCeEEEEEcCCC---
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ---------SAYDAKIVGFDQ---------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg---------~~~~a~vv~~d~---------~~DlAlLkv~~~~--- 210 (385)
..|+|.+|+++ ||||+|||+.+...+.|.+... +.+..+-+..++ .+||||||++.+.
T Consensus 24 ~~CgGtLIs~~-~VLTAAhC~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~DIALl~L~~~~~~~ 102 (235)
T 2wph_S 24 AFCGGSIVNEK-WIVTAAHCVETGVKITVVAGEHNIEETEHTEQKRNVIRIIPHHNFNAAINTYNHDIALLELDEPLVLN 102 (235)
T ss_dssp TCEEEEEEETT-EEEECGGGCCTTSCCEEEESCCBTTSCCSCCEEEEEEEEEECTTTTSSSSCCTTCCEEEEESSCCCCB
T ss_pred eeEEEEEEeCC-EEEECHHHCcCCCCEEEEEcccccCCCCCCcEEeeeEEEEeCCCCcccCCcCCCCEEEEEECCcCcCC
Confidence 47999999987 9999999998777788877531 223444343332 3599999998764
Q ss_pred CCCcceecCCCCC---CCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCCC-CCcccEEEEc-----cccCC
Q 016647 211 DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATG-RPIQDVIQTD-----AAINP 276 (385)
Q Consensus 211 ~~~~~l~l~~~~~---~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~~d-----~~i~~ 276 (385)
..+.|+.|..... +..++.+++.||..... .......+.-+....+..... ......+... ...|.
T Consensus 103 ~~v~picL~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~~C~ 182 (235)
T 2wph_S 103 SYVTPICIADKEYTNIFLKFGSGYVSGWGRVFHKGRSALVLQYLRVPLVDRATCLRSTKFTITNNMFCAGFHEGGRDSCQ 182 (235)
T ss_dssp TTBCCCBCCCHHHHHHHHHTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHHHTCSSCCCTTEEEESCTTCSCBCCT
T ss_pred CCccccCCCCCcccccccCCccEEEEeCCCccCCCCccchheEeeeeeeCHHHhcCcccCCCCCCEEEeCCCCCCCccCC
Confidence 2456677753221 23578999999974321 122233333222222211111 1122344442 35789
Q ss_pred CCCCceeeC-CCc--cEEEEeeccc
Q 016647 277 GNSGGPLLD-SSG--SLIGINTAIY 298 (385)
Q Consensus 277 G~SGGPlvn-~~G--~VVGI~s~~~ 298 (385)
|+|||||+. .+| .++||++++.
T Consensus 183 GDsGgPl~~~~~~~~~l~GI~S~g~ 207 (235)
T 2wph_S 183 GDSGGPHVTEVEGTSFLTGIISWGE 207 (235)
T ss_dssp TCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCCCceEEeECCeEEEEEEEEECC
Confidence 999999985 244 5999999864
No 104
>4dgj_A Enteropeptidase catalytic light chain; serine protease, hydrolase; 1.90A {Homo sapiens} PDB: 1ekb_B
Probab=99.24 E-value=1.6e-10 Score=105.61 Aligned_cols=147 Identities=17% Similarity=0.193 Sum_probs=89.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC----CeEEEEecC----------CCeEeeEEEEECCC-------CCeEEEEEcCC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFAD----------QSAYDAKIVGFDQD-------KDVAVLRIDAP 209 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~----~~i~V~~~d----------g~~~~a~vv~~d~~-------~DlAlLkv~~~ 209 (385)
...|+|.+|+++ ||||+|||+.+. ..+.|.+.. ...+..+-+..++. +|||||+++.+
T Consensus 23 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DiALl~L~~~ 101 (235)
T 4dgj_A 23 RLLCGASLVSSD-WLVSAAHCVYGRNLEPSKWTAILGLHMKSNLTSPQTVPRLIDEIVINPHYNRRRKDNDIAMMHLEFK 101 (235)
T ss_dssp EEEEEEEECSSS-EEEECHHHHTTSCSSGGGEEEEESCCBTTCCSCTTCEEEEEEEEEECTTCBTTTTBTCCEEEEESSC
T ss_pred CeEEEEEEeeCC-EEEECHHhcCCCCCCCccEEEEEeeecccccCCCceeEEeEEEEEECCCCCCCCCCCeEEEEEECCc
Confidence 347999999987 999999999542 346666542 11233444445543 59999999876
Q ss_pred C---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCC--CCCCcccEEEEc-----cc
Q 016647 210 K---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA--TGRPIQDVIQTD-----AA 273 (385)
Q Consensus 210 ~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~--~~~~~~~~i~~d-----~~ 273 (385)
. ..+.|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+... ..
T Consensus 102 ~~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~Ca~~~~~~~~ 181 (235)
T 4dgj_A 102 VNYTDYIQPISLPEENQVFPPGRNCSIAGWGTVVYQGTTADILQEADVPLLSNERCQQQMPEYNITENMICAGYEEGGID 181 (235)
T ss_dssp CCCBTTBCCCBCCCTTCCCCTTCEEEEEESSBSSTTCCBCSBCEEEEEEEECHHHHHHHCTTSCCCTTEEEECCTTCCCB
T ss_pred cccCCcccccCCCCcccCCCCCCEEEEEecccCCCCCccchhheEeEeeecCHHHhhhhccCccCCCCeEeecCCCCCCc
Confidence 4 346678876543 356899999999974221 1223333332222211110 001122344442 25
Q ss_pred cCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 274 INPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 274 i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
.|.|+|||||+.. +| .++||++++.
T Consensus 182 ~C~GDsGgPl~~~~~~~~~l~Gi~S~g~ 209 (235)
T 4dgj_A 182 SCQGDSGGPLMCQENNRWFLAGVTSFGY 209 (235)
T ss_dssp CCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred cCCCCCCCeEEEEECCcEEEEEEEEEcC
Confidence 6899999999853 34 4999999864
No 105
>4f4o_C Haptoglobin; globin fold, serine protease fold, complement control protei haemoglobin scavenging, oxygen storage-transport complex; HET: HEM NAG FUC; 2.90A {Sus scrofa}
Probab=99.23 E-value=8.2e-11 Score=114.62 Aligned_cols=148 Identities=12% Similarity=0.132 Sum_probs=93.3
Q ss_pred CCeEEEEEEEcCCCEEEecccccCCCC-----------eEEEEecCCCeEeeEEEEECC---CCCeEEEEEcCCC---CC
Q 016647 150 PQGSGSGFVWDSKGHVVTNYHVIRGAS-----------DIRVTFADQSAYDAKIVGFDQ---DKDVAVLRIDAPK---DK 212 (385)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~~-----------~i~V~~~dg~~~~a~vv~~d~---~~DlAlLkv~~~~---~~ 212 (385)
....+.|.||+++ ||||+|||+.... ...+.....+.+..+-+..++ .+||||||++.+. +.
T Consensus 124 ~~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~HP~y~~nDIALlkL~~~v~~~~~ 202 (347)
T 4f4o_C 124 HNLTSGATLINEQ-WLLTTAKNLRLGHKNDTKAKDIAPTLRLYVGKKQEVEIEKVIFHPDNSTVDIGLIKLKQKVPVNER 202 (347)
T ss_dssp TCCEEECCBCSSS-EEEECHHHHTTTSCTTCCHHHHGGGCEEEETTTEEECEEEEEECSCTTTCCCEEEEESSCCCCSSS
T ss_pred CCEEEEEEEEcCC-EEEeCcccccCCCCCcceEEeeeeeeeecCCCeEEEEEEEEEECcCCCCCCEEEEEECCCccCCCc
Confidence 3457999999987 9999999996322 234444555566666666665 3599999998764 35
Q ss_pred CcceecCCCCCCCCCCEEEEEeCCCCCCC----ceEEeEEeeeeeeeccC--C----------------CCCCcccEEEE
Q 016647 213 LRPIPIGVSADLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSA--A----------------TGRPIQDVIQT 270 (385)
Q Consensus 213 ~~~l~l~~~~~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~~--~----------------~~~~~~~~i~~ 270 (385)
+.|+.|........|...++.||...... ......+.-+....+.. . ........+..
T Consensus 203 v~PicLp~~~~~~~g~~~~v~GWG~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iCA 282 (347)
T 4f4o_C 203 VMPICLPSKDYVNVGLVGYVSGWGRNANLNFTEHLKYVMLPVADQEKCVQYYEGSTVPEKKTPKSPVGVQPILNEHTFCA 282 (347)
T ss_dssp CCCCBCCSSCCCCTTCEEEEEECSBCTTSSBCSSCEEEEEEEECHHHHHHHHSSCSSGGGCCCCCSSSSCCCCSTTEEEE
T ss_pred eeeeecCccccCCCCcEEEEeccccCCCCCCCccceEEEEEEeCHHHHHHHhccccccccccccccccccccccCCeEEe
Confidence 67888876666788999999999743321 22333333222211110 0 00011233443
Q ss_pred -----ccccCCCCCCceeeC---CCcc--EEEEeeccc
Q 016647 271 -----DAAINPGNSGGPLLD---SSGS--LIGINTAIY 298 (385)
Q Consensus 271 -----d~~i~~G~SGGPlvn---~~G~--VVGI~s~~~ 298 (385)
....|.|+|||||+- .+|+ ++||+|++.
T Consensus 283 G~~~~~~d~C~GDSGGPLv~~~~~~~~~~lvGIvS~G~ 320 (347)
T 4f4o_C 283 GLSKYQEDTCYGDAGSAFAVHDKDDDTWYAAGILSFDK 320 (347)
T ss_dssp CCCTTCCCCCTTCTTCEEEEEETTTTEEEEEEEEEECC
T ss_pred cCCCCCCCCCCCCCCcceEEEeCCCCEEEEEEEEEeCC
Confidence 134688999999972 3343 899999864
No 106
>2f9n_A Alpha I tryptase; serine proteinase, trypsin-like, difucosylation, hydrolase-hydrolase inhibitor complex; HET: AR7 NAG FUC; 1.60A {Homo sapiens} PDB: 2f9o_A* 2f9p_A* 1lto_A 2fpz_A* 2bm2_A* 2fs8_A* 2fs9_A* 2fww_A* 2fxr_A* 2gdd_A* 2za5_A* 3v7t_A* 4a6l_A* 1a0l_A* 2zec_A* 2zeb_A*
Probab=99.23 E-value=1.6e-10 Score=106.55 Aligned_cols=146 Identities=16% Similarity=0.216 Sum_probs=89.9
Q ss_pred eEEEEEEEcCCCEEEecccccCC----CCeEEEEecC------CCeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
..|+|.+|+++ ||||+|||+.. ...+.|.+.+ ++.+..+-+..++ .+|||||+++.+. .
T Consensus 27 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~~v~~g~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~~v~~~~ 105 (245)
T 2f9n_A 27 HFCGGSLIHPQ-WVLTAAHCVGPDVKDLATLRVQLREQHLYYQDQLLPVSRIIVHPQFYIIQTGADIALLELEEPVNISS 105 (245)
T ss_dssp EEEEEEEEETT-EEEECGGGGCSSCCCGGGEEEECSCSBTTTTCCCBCEEEEEECTTCCSSCCTTCCEEEEESSCCCCCS
T ss_pred eEEEEEEeeCC-EEEECHHhCCCCCCCcceEEEEeCCcccccCceEEEEEEEEECCCccCCCCCCcEEEEEeCCCCcCCC
Confidence 47999999987 99999999953 3457777643 2334555555554 4599999998764 2
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCCCCCC-------ceEEeEEeeeeeeeccC--CC--------CCCcccEEEE---
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH-------TLTTGVISGLRREISSA--AT--------GRPIQDVIQT--- 270 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~~-------~~~~G~Vs~~~~~~~~~--~~--------~~~~~~~i~~--- 270 (385)
.+.|+.|.... .+..|+.++++||...... ......+.-+....+.. .. .......+..
T Consensus 106 ~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~~~~~L~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~Ca~~~ 185 (245)
T 2f9n_A 106 RVHTVMLPPASETFPPGMPCWVTGWGDVDNDEPLPPPFPLKQVKVPIMENHICDAKYHLGAYTGDDVRIIRDDMLCAGNS 185 (245)
T ss_dssp SSCCCBCCCTTCCCCTTCCEEEEESCCSBTTBCCCTTCBCEEEECCEECHHHHHHHHHTTCCSCTTSCCSCTTEEEECCS
T ss_pred CccccCCCCcccCCCCCCEEEEEEeCCCCCCCCCCccccceEEEEEEcCHHHhhhhhcccccccccccccccccEeecCC
Confidence 46677776433 3568999999999743211 12222222222111110 00 0111233443
Q ss_pred ccccCCCCCCceeeC-CCc--cEEEEeeccc
Q 016647 271 DAAINPGNSGGPLLD-SSG--SLIGINTAIY 298 (385)
Q Consensus 271 d~~i~~G~SGGPlvn-~~G--~VVGI~s~~~ 298 (385)
....|.|+|||||+. .+| .++||++++.
T Consensus 186 ~~~~C~GDSGgPL~~~~~g~~~l~GI~S~g~ 216 (245)
T 2f9n_A 186 QRDSCQGDSGGPLVCKVNGTWLQAGVVSWGE 216 (245)
T ss_dssp SSBCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCcCCCCCCCceEEEECCEEEEEEEEEeCC
Confidence 235789999999985 345 5899999864
No 107
>2bz6_H Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: b.47.1.2 PDB: 1cvw_H* 1dva_H* 1fak_H* 1j9c_H* 1jbu_H 1dan_H 1klj_H 1o5d_H* 1qfk_H* 1w0y_H* 1w2k_H* 1w7x_H* 1w8b_H* 1wqv_H* 1wss_H* 1wtg_H* 1wun_H* 1wv7_H* 1ygc_H* 1z6j_H* ...
Probab=99.23 E-value=3.8e-11 Score=111.35 Aligned_cols=146 Identities=18% Similarity=0.188 Sum_probs=89.5
Q ss_pred eEEEEEEEcCCCEEEecccccCCCC---eEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC--
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGAS---DIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK-- 210 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~---~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~-- 210 (385)
..|+|.+|+++ ||||+|||+.+.. .+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 24 ~~CgGtLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~v~~ 102 (254)
T 2bz6_H 24 QLCGGTLINTI-WVVSAAHCFDKIKNWRNLIAVLGEHDLSEHDGDEQSRRVAQVIIPSTYVPGTTNHDIALLRLHQPVVL 102 (254)
T ss_dssp EEEEEEECSSS-EEEECGGGGTTCSCGGGEEEEESCCBTTCCCSCCEEEEEEEEEEETTCCTTSCSSCCEEEEESSCCCC
T ss_pred cEEEEEEecCC-EEEECHHHcCCCCCcceEEEEECCcccCCCCCCcEEEEEEEEEECCCCCCCCCcCcEEEEEECCcccc
Confidence 47999999987 9999999997654 37787743 1234444444443 4699999998764
Q ss_pred -CCCcceecCCCC----CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccC--CC----CCCcccEEEEc---
Q 016647 211 -DKLRPIPIGVSA----DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSA--AT----GRPIQDVIQTD--- 271 (385)
Q Consensus 211 -~~~~~l~l~~~~----~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~--~~----~~~~~~~i~~d--- 271 (385)
+.+.|+.|.... .+..|+.+++.||..... .......+..+....+.. .. .......+...
T Consensus 103 ~~~v~picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~~~~~~~~Ca~~~~ 182 (254)
T 2bz6_H 103 TDHVVPLCLPERTFSERTLAFVRFSLVSGWGQLLDRGATALELMVLNVPRLMTQDCLQQSRKVGDSPNITEYMFCAGYSD 182 (254)
T ss_dssp BTTBCCCBCCCHHHHHHTGGGCCEEEEEESCBSSTTSCBCSBCEEEEEEEECHHHHHHHSCCCTTCCCCCTTEEEESCSS
T ss_pred CCCccceECCCCccccccccCCCcEEEEeCcccCCCCCCChhheeeeeeeecHHHHhhhhhccccCCccCCCEEeecCCC
Confidence 245677775322 135689999999974322 122233333222211110 00 01122345442
Q ss_pred --cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 272 --AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 272 --~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
...|.|+|||||+.. +| .++||++++.
T Consensus 183 ~~~~~C~GDSGgPl~~~~~g~~~l~GI~S~g~ 214 (254)
T 2bz6_H 183 GSKDSCKGDSGGPHATHYRGTWYLTGIVSWGQ 214 (254)
T ss_dssp SSCBCCGGGTTCEEEEEETTEEEEEEEEEECS
T ss_pred CCCccccccCCCceEEeECCEEEEEEEEEECC
Confidence 357899999999853 45 5999999864
No 108
>1z8g_A Serine protease hepsin; serine protease hepsin, protease, hydrolase-hydrolase inhibi complex; HET: AR7; 1.55A {Homo sapiens} SCOP: b.47.1.2 d.170.1.2 PDB: 3t2n_A 1o5e_H* 1o5f_H* 1p57_B* 1o5e_L* 1o5f_L* 1p57_A*
Probab=99.22 E-value=2e-10 Score=112.82 Aligned_cols=147 Identities=17% Similarity=0.219 Sum_probs=91.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCC----CCeEEEEecC-------CCeEeeEEEEECC-------------CCCeEEEEE
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFAD-------QSAYDAKIVGFDQ-------------DKDVAVLRI 206 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~d-------g~~~~a~vv~~d~-------------~~DlAlLkv 206 (385)
...+.|.||+++ ||||+|||+.. ...+.|.+.. +..+..+-+..++ .+||||||+
T Consensus 140 ~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~~~~nDIALlkL 218 (372)
T 1z8g_A 140 AHLCGGSLLSGD-WVLTAAHCFPERNRVLSRWRVFAGAVAQASPHGLQLGVQAVVYHGGYLPFRDPNSEENSNDIALVHL 218 (372)
T ss_dssp EEEEEEEESSSS-EEEECGGGCCGGGCCGGGEEEEESCSBTTCTTSEEECEEEEEEETTCGGGTCTTCCCCTTCCEEEEE
T ss_pred ceEEEEEEecCC-EEEEChhhcCCCCCccceEEEEEeeEeccCCCCcEEEEEEEEECCCccccccCCCCCCCccEEEEEE
Confidence 357999999987 99999999942 2457777643 2234444444433 359999999
Q ss_pred cCCC---CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCC---CCCCcccEEEEc---
Q 016647 207 DAPK---DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAA---TGRPIQDVIQTD--- 271 (385)
Q Consensus 207 ~~~~---~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~---~~~~~~~~i~~d--- 271 (385)
+.+. +.+.|+.|.... .+..|+.+++.||..... .......+.-+....+... ........+...
T Consensus 219 ~~pv~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCag~~~ 298 (372)
T 1z8g_A 219 SSPLPLTEYIQPVCLPAAGQALVDGKICTVTGWGNTQYYGQQAGVLQEARVPIISNDVCNGADFYGNQIKPKMFCAGYPE 298 (372)
T ss_dssp SSCCCCCSSCCCCBCCCTTCCCCTTCEEEEEESSBSSTTSCBCSBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCTT
T ss_pred CCCCCCCCceeccccCCcccCCCCCCEEEEEecCCCCCCCCCCceeeEEEEEecChHHhCcchhcCCcCCCCeEeeecCC
Confidence 8764 346777776432 356799999999974322 1223333333332222210 111122445442
Q ss_pred --cccCCCCCCceeeCCC-----c--cEEEEeeccc
Q 016647 272 --AAINPGNSGGPLLDSS-----G--SLIGINTAIY 298 (385)
Q Consensus 272 --~~i~~G~SGGPlvn~~-----G--~VVGI~s~~~ 298 (385)
...|.|+|||||+-.+ | .++||+|++.
T Consensus 299 ~~~d~C~GDSGGPLv~~~~~~~~~~~~lvGIvS~G~ 334 (372)
T 1z8g_A 299 GGIDACQGDSGGPFVCEDSISRTPRWRLCGIVSWGT 334 (372)
T ss_dssp CSCBCCTTCTTCEEEEEECTTSSCEEEEEEEEEEBS
T ss_pred CCCcCCCCCCccceEeccCcCCCCCEEEEEEEEeCC
Confidence 3578999999998432 3 6999999864
No 109
>3cp7_A Alkaline serine protease Al20; trypsin-like, hydrolase; 1.39A {Nesterenkonia abyssinica}
Probab=99.22 E-value=1.1e-10 Score=106.27 Aligned_cols=139 Identities=18% Similarity=0.172 Sum_probs=80.0
Q ss_pred eEEEEEEEc---CCCEEEecccccCCC------CeEEEEecC--C----CeEeeEEEEEC--------CCCCeEEEEEcC
Q 016647 152 GSGSGFVWD---SKGHVVTNYHVIRGA------SDIRVTFAD--Q----SAYDAKIVGFD--------QDKDVAVLRIDA 208 (385)
Q Consensus 152 ~~GSGfiI~---~~G~ILT~aHvv~~~------~~i~V~~~d--g----~~~~a~vv~~d--------~~~DlAlLkv~~ 208 (385)
..|+|.||+ ++ ||||+|||+.+. ..+.|.... . ..+.++-+..+ ..+||||||++.
T Consensus 21 ~~CgGslI~s~s~~-~VLTAAHC~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~v~~~~~hp~y~~~~~~~~DiAll~L~~ 99 (218)
T 3cp7_A 21 FVCSANIVASANQS-TVATAGHCLHDGNGGQFARNFVFAPAYDYGESEHGVWAAEELVTSAEWANRGDFEHDYAFAVLET 99 (218)
T ss_dssp EEEEEEEBCCTTSC-EEEECGGGTBCCTTCBBCEEEEEEETCSSSCCTTCCEEEEEEEECHHHHHHCCGGGCCEEEEECC
T ss_pred eEEEEEEEecCCCC-EEEEChHhcCcCCCCeeecCEEEECcccCCCCCccEEEEEEEEECcccccCCCCcCCEEEEEEeC
Confidence 479999998 77 999999999653 245555431 1 13444433332 356999999988
Q ss_pred C--C---CCCc-ceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCce
Q 016647 209 P--K---DKLR-PIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGP 282 (385)
Q Consensus 209 ~--~---~~~~-~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGP 282 (385)
+ . +.+. ++.|... ...|+.+.+.||+......... ............ .. ...+...|..+.|+||||
T Consensus 100 ~~~~~~~~~v~~~~~l~~~--~~~g~~~~v~GwG~~~~~~~~~-l~~C~~~~~~~~-~~---~~~~~~~Ca~~~GDSGGP 172 (218)
T 3cp7_A 100 KGGTTVQQQVGTASPIAFN--QPRGQYYSAYGYPAAAPFNGQE-LHSCHGTATNDP-MG---SSTQGIPCNMTGGSSGGP 172 (218)
T ss_dssp BTTBCHHHHHSCCBCBCCS--CCSSCEEEEEECCCSTTCCSSS-CEEEEEECEECT-TS---SSCEEEECCCCTTCTTCE
T ss_pred CCCcChhHhcCcccceeec--CCCCCEEEEEeCCCCCCCCCce-eeEeeeeEEcCC-CC---CceEEecCCCCCCCcCCe
Confidence 6 2 1122 5555432 2478999999998643110000 000000000000 00 111122344568999999
Q ss_pred eeCC---CccEEEEeeccc
Q 016647 283 LLDS---SGSLIGINTAIY 298 (385)
Q Consensus 283 lvn~---~G~VVGI~s~~~ 298 (385)
|+.. .++++||+|++.
T Consensus 173 lv~~~~g~~~lvGIvS~G~ 191 (218)
T 3cp7_A 173 WFLGNGTGGAQNSTNSYGY 191 (218)
T ss_dssp EEESSSSSSCEEEECCEEE
T ss_pred eEEccCCCeEEEEEEcccc
Confidence 9953 378999999874
No 110
>2kjp_A Uncharacterized protein YLBL; mixed alpha-beta protein, cell membrane, hydrolase, membrane, protease, serine protease, transmembrane; NMR {Bacillus subtilis}
Probab=99.20 E-value=1.6e-11 Score=96.35 Aligned_cols=67 Identities=22% Similarity=0.441 Sum_probs=61.2
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.+.+++|++. ||++||+|++|||++|.++.++.+++...++|++++|+|+|+|+.+++++++.+.++
T Consensus 7 ~V~~~spA~~-GL~~GD~I~~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 73 (91)
T 2kjp_A 7 SVVENMPAKG-KIEVGDKIISADGKNYQSAEKLIDYISSKKAGDKVTLKIEREEKEKRVTLTLKQFPD 73 (91)
T ss_dssp CCCCSSCCSS-CCCSSCEEEEETTBCCSSHHHHHHHHSSCCSSCEECEEEESSSCEECCCEECCCCTT
T ss_pred EECCCChHHH-cCCCCCEEEEECCEECCCHHHHHHHHHcCCCCCEEEEEEEECCEEEEEEEEEeccCC
Confidence 3567888888 899999999999999999999999999887999999999999999999999987764
No 111
>1arb_A Achromobacter protease I; hydrolase(serine protease); 1.20A {Achromobacter lyticus} SCOP: b.47.1.1 PDB: 1arc_A*
Probab=99.19 E-value=1.1e-10 Score=109.65 Aligned_cols=146 Identities=14% Similarity=0.126 Sum_probs=82.1
Q ss_pred HhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCC-----CEEEecccccCCC----CeEEEEecCC---------
Q 016647 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSK-----GHVVTNYHVIRGA----SDIRVTFADQ--------- 185 (385)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~-----G~ILT~aHvv~~~----~~i~V~~~dg--------- 185 (385)
.++++|++|.. .+...|+|+||+++ .||||||||+.+. ..++|.+..+
T Consensus 20 ~~~~aV~rl~~--------------~g~~~CGGSLI~~~~~~~~~~VLTAAHCv~~~~~~~~~~~v~~~~~~~~c~~~~~ 85 (268)
T 1arb_A 20 DIIRAVGAYSK--------------SGTLACTGSLVNNTANDRKMYFLTAHHCGMGTASTAASIVVYWNYQNSTCRAPNT 85 (268)
T ss_dssp TGGGGEEEEEE--------------TTEEEEEEEEBCCTTCCCCCEEEEEGGGSCCSHHHHHTCEEEESCCCSSCCCTTS
T ss_pred HhhceEEEEEe--------------CCccEEeEEEEcCCCCCCCCEEEEcHHhCCCccCcceEEEEEeCCCCCccccccc
Confidence 45788999864 12357999999872 4999999999752 3456665211
Q ss_pred ------------Ce-EeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCce---------
Q 016647 186 ------------SA-YDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTL--------- 243 (385)
Q Consensus 186 ------------~~-~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~--------- 243 (385)
.. ....+++....+||||||++.+. + .+..+++.||........
T Consensus 86 ~~~~~~~~~~~~~~~v~~~i~h~~~~nDIALLrL~~~v---~-----------~~~~~~vsGWG~t~~~~~~~~~~~~~~ 151 (268)
T 1arb_A 86 PASGANGDGSMSQTQSGSTVKATYATSDFTLLELNNAA---N-----------PAFNLFWAGWDRRDQNYPGAIAIHHPN 151 (268)
T ss_dssp GGGGSCCCCCCCCEEECEEEEEEETTTTEEEEEESSCC---C-----------GGGCCEEBCEECCSCCCSCEEEEECGG
T ss_pred cccccccCCcceEEeccceEecCCCCCceEEEEecCCC---C-----------CCCceEEeCcCccCCCCCcceeeccCC
Confidence 11 12233444567899999998742 1 123445555542211100
Q ss_pred -EEeEEeeeeee--eccCCCCCCcccEEEEc-----cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 244 -TTGVISGLRRE--ISSAATGRPIQDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 244 -~~G~Vs~~~~~--~~~~~~~~~~~~~i~~d-----~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
..-.++..... ...+. .......+... ...+.|+|||||++.+++++||++++.
T Consensus 152 ~~l~~i~~~~~~~~~~~~~-~~~~~~~iCag~~~~~gdtC~gdsGgPl~~~~~~~~Gi~s~g~ 213 (268)
T 1arb_A 152 VAEKRISNSTSPTSFVAWG-GGAGTTHLNVQWQPSGGVTEPGSSGSPIYSPEKRVLGQLHGGP 213 (268)
T ss_dssp GCSCEEEEECSCCEEECTT-SSSCSSEEEEECCTTSCCCCTTCTTCEEECTTSCEEEEEEECS
T ss_pred cccEEEEeecccccccccc-ccccCCeEEEeeecCCCCCccCcccCCcEeeCCEEEEEEeecC
Confidence 00011100000 00010 00112344432 147899999999987889999999864
No 112
>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}
Probab=99.19 E-value=3e-11 Score=114.23 Aligned_cols=146 Identities=15% Similarity=0.070 Sum_probs=90.3
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CCCc
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKLR 214 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~~ 214 (385)
...+.|.||+++ ||||+|||+.+...+.|.+.. .+.+..+-+..++ .+||||||++.+. ..+.
T Consensus 76 ~~~CgGtLI~~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~nDIALl~L~~pv~~~~~v~ 154 (283)
T 3f1s_B 76 KDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGL 154 (283)
T ss_dssp CEEEEEEEEETT-EEEECHHHHTSCSSCEEEECTTC-CCCCEEEEEEEEEECTTCBTTTTBTCCEEEEESSCCCTTTTCC
T ss_pred CeeeccEEecCC-EEEEcHHhcCccCceEEEEeeeeCCCCcEEEEeEEEEECCCCCCCCCCCCEEEEEeCCcccCCCCEE
Confidence 457999999987 999999999888888888853 2335555555554 4599999998764 3466
Q ss_pred ceecCCCC----CCCCCCEEEEEeCCCCCC---CceEEeEEeeeeeeeccCC-CCCCcccEEEEc--cccCCCCCCceee
Q 016647 215 PIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAA-TGRPIQDVIQTD--AAINPGNSGGPLL 284 (385)
Q Consensus 215 ~l~l~~~~----~~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~d--~~i~~G~SGGPlv 284 (385)
|+.|.... .+..|+.+++.||..... .......+.-+....+... .......++... .....|+|||||+
T Consensus 155 picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDSGgPlv 234 (283)
T 3f1s_B 155 PVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVT 234 (283)
T ss_dssp CCBCCCHHHHHHTTTTTSCEEEEECBCC-------CEEEEEEEECHHHHHHHHTSCCCTTEEEEECSSCGGGBCTTCEEE
T ss_pred eEECCCCccccccccCCCEEEEEECCCCCCCCCceeeEEEEeEeCHHHHhhhhcCCCCCCeEcccCCCCCCCCCCCCcEE
Confidence 77776432 357799999999975211 1122222222221111100 001112333332 2234689999998
Q ss_pred C-CCcc--EEEEeecc
Q 016647 285 D-SSGS--LIGINTAI 297 (385)
Q Consensus 285 n-~~G~--VVGI~s~~ 297 (385)
- .+|+ |+||+++.
T Consensus 235 ~~~~~~~~l~GIvS~g 250 (283)
T 3f1s_B 235 REHRGSWFLTGVLGSQ 250 (283)
T ss_dssp EECSSCEEEEEEECCC
T ss_pred EEECCEEEEEEEEEeC
Confidence 5 4565 99999864
No 113
>3i18_A LMO2051 protein; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.70A {Listeria monocytogenes} PDB: 2kjk_A 3i1e_A
Probab=99.16 E-value=1.2e-10 Score=92.93 Aligned_cols=67 Identities=25% Similarity=0.400 Sum_probs=60.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.+.+++|++. ||++||+|++|||++|.++.++.+++...++|++++++|.|+|+.+++++++.+.++
T Consensus 13 ~V~~~spA~~-GL~~GD~I~~Ing~~v~~~~dl~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 79 (100)
T 3i18_A 13 SVKDDVPAAD-VLHAGDLITEIDGNAFKSSQEFIDYIHSKKVGDTVKINYKHGDKNEQADIKLTAIDK 79 (100)
T ss_dssp EECTTSGGGG-TCCTTCEEEEETTBCCSSHHHHHHHHHTSCTTCEEEEEEEETTEEEEEEEECEECST
T ss_pred EeCCCCchHH-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEecCCC
Confidence 3457788885 999999999999999999999999999888899999999999999999999987764
No 114
>3rm2_H Thrombin heavy chain; serine protease, kringle, hydrolase, blood coagulation, BLOO clotting, convertion of fibrinogen to fibrin; HET: TYS NAG S00; 1.23A {Homo sapiens} PDB: 1a2c_H* 1a3e_H* 1a46_H* 1a4w_H* 1a5g_H* 1a61_H* 1abi_H* 1abj_H* 1ad8_H* 1ae8_H* 1afe_H* 1a3b_H* 1ai8_H* 1aix_H* 1awf_H* 1awh_B* 1ay6_H* 1b5g_H* 1ba8_B* 1bb0_B* ...
Probab=99.16 E-value=3e-10 Score=105.09 Aligned_cols=146 Identities=18% Similarity=0.224 Sum_probs=87.2
Q ss_pred eEEEEEEEcCCCEEEecccccC--------CCCeEEEEecCC---------C-eEeeEEEEECC--------CCCeEEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFADQ---------S-AYDAKIVGFDQ--------DKDVAVLR 205 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~--------~~~~i~V~~~dg---------~-~~~a~vv~~d~--------~~DlAlLk 205 (385)
..|+|.+|+++ ||||+|||+. ....+.|.+... . ....+-+..++ .+|||||+
T Consensus 26 ~~CgGtLI~~~-~VLTAAHC~~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~~DIALl~ 104 (259)
T 3rm2_H 26 LLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 104 (259)
T ss_dssp EEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEE
T ss_pred eEEEEEEEeCC-EEEEcHHhCcccccccccCcccEEEEECcccccccccCcceeeEEEEEEECCCCCCCCCCCCcEEEEE
Confidence 47999999987 9999999984 234567776432 1 12234333332 34999999
Q ss_pred EcCCC---CCCcceecCCCCC----CCCCCEEEEEeCCCCCC-----------CceEEeEEeeeeeeeccCCCC-CCccc
Q 016647 206 IDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAATG-RPIQD 266 (385)
Q Consensus 206 v~~~~---~~~~~l~l~~~~~----~~~G~~V~~iG~p~g~~-----------~~~~~G~Vs~~~~~~~~~~~~-~~~~~ 266 (385)
++.+. ..+.|+.|..... +..|..+.+.||..... .......+.-+....+..... .....
T Consensus 105 L~~~v~~~~~v~picLp~~~~~~~~~~~g~~~~v~GwG~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~C~~~~~~~~~~~ 184 (259)
T 3rm2_H 105 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 184 (259)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESCCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred eCCceEcCCCcccccCCCccccccccCCCCEEEEeecCCCcCcCCccccccccccceEEEEEEeCHHHhhhhhcccCCCc
Confidence 98764 3456777753221 35799999999974321 112222232222221211111 11233
Q ss_pred EEEEc--------cccCCCCCCceeeCC---Cc--cEEEEeeccc
Q 016647 267 VIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIY 298 (385)
Q Consensus 267 ~i~~d--------~~i~~G~SGGPlvn~---~G--~VVGI~s~~~ 298 (385)
.+... ...|.|+|||||+-. +| .++||+|++.
T Consensus 185 ~~Cag~~~~~~~~~~~C~GDsGgPL~~~~~~~~~~~l~GI~S~g~ 229 (259)
T 3rm2_H 185 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE 229 (259)
T ss_dssp EEEECCCGGGSCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred eEeeeccCCCCCCCcccCCCCCCeeEEEECCCCCEEEEEEEEECC
Confidence 45442 267899999999842 33 6999999863
No 115
>2kl1_A YLBL protein; structure genomics, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; NMR {Geobacillus thermodenitrificans}
Probab=99.15 E-value=9e-11 Score=92.56 Aligned_cols=67 Identities=24% Similarity=0.440 Sum_probs=60.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.+.++++++. ||++||+|++|||++|.++.++.+++...++|+.++|+|.|+|+.+++++++.+.++
T Consensus 11 ~V~~~spA~~-GL~~GD~Il~InG~~v~~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 77 (94)
T 2kl1_A 11 SVLPNMPAAG-RLEAGDRIAAIDGQPINTSEQIVSYVREKQAGDRVRVTFIRDRKQHEAELVLKPFPH 77 (94)
T ss_dssp CCCTTSTTBT-TBCTTCEEEEETTBCCCCHHHHHHHHHHSCTTCCEEEEEEETTEEEEEEECCCBCSS
T ss_pred EECCCChHHh-CCCCCCEEEEECCEECCCHHHHHHHHHhCCCCCEEEEEEEECCEEEEEEEEEeeCCC
Confidence 4567788888 899999999999999999999999999888999999999999999999999887763
No 116
>2bdy_A Thrombin; thrombin, complex structure, hydrolase, hydrolase-hydrolase complex; HET: TYS UNB; 1.61A {Homo sapiens} SCOP: b.47.1.2 PDB: 3k65_B 1doj_A* 1hag_E* 1xm1_A* 1nu9_A* 3sqe_E 3sqh_E 1jwt_A* 1d9i_A* 1d6w_A* 1g37_A* 1nm6_A* 1nt1_A* 1sl3_A* 1ta2_A* 1ta6_A* 1z71_A* 1zgi_A* 1zgv_A* 1zrb_A* ...
Probab=99.15 E-value=4.6e-10 Score=106.26 Aligned_cols=146 Identities=18% Similarity=0.217 Sum_probs=88.2
Q ss_pred eEEEEEEEcCCCEEEecccccCC--------CCeEEEEecCC----------CeEeeEEEEECC--------CCCeEEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRG--------ASDIRVTFADQ----------SAYDAKIVGFDQ--------DKDVAVLR 205 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~--------~~~i~V~~~dg----------~~~~a~vv~~d~--------~~DlAlLk 205 (385)
..|.|.||+++ ||||+|||+.. ...+.|++... +.+..+-+..++ .+|||||+
T Consensus 56 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~ 134 (289)
T 2bdy_A 56 LLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 134 (289)
T ss_dssp EEEEEEECSSS-EEEECGGGTEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEEEEEEEEECTTCBTTTTCBTCCEEEE
T ss_pred EEEEEEEecCC-EEEEcHHhcccCccccccCcccEEEEEccccccccCCCcceeeeeEEEEECCCCCCCCCCCCeEEEEE
Confidence 57999999987 99999999942 34577777432 122334333332 35999999
Q ss_pred EcCCC---CCCcceecCCCCC----CCCCCEEEEEeCCCCCC-----------CceEEeEEeeeeeeeccCCCC-CCccc
Q 016647 206 IDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD-----------HTLTTGVISGLRREISSAATG-RPIQD 266 (385)
Q Consensus 206 v~~~~---~~~~~l~l~~~~~----~~~G~~V~~iG~p~g~~-----------~~~~~G~Vs~~~~~~~~~~~~-~~~~~ 266 (385)
++.+. +.+.|+.|..... +..|..+++.||..... .......+.-+....+..... .....
T Consensus 135 L~~pv~~~~~v~picLp~~~~~~~~~~~g~~~~v~GWG~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~C~~~~~~~i~~~ 214 (289)
T 2bdy_A 135 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 214 (289)
T ss_dssp ESSCCCCBTTBCCCBCCCHHHHHHHCCTTCEEEEEESSCSSCC-------CCCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred ECCccccCCcccccCCCCccccccccCCCCEEEEECCCcCCCccccCccccccccceEEEEEEECHHHhhccccCcCCCC
Confidence 98764 2466777754321 45799999999974321 112222232222221111111 11234
Q ss_pred EEEEc--------cccCCCCCCceeeCC---Cc--cEEEEeeccc
Q 016647 267 VIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIY 298 (385)
Q Consensus 267 ~i~~d--------~~i~~G~SGGPlvn~---~G--~VVGI~s~~~ 298 (385)
.+... ...|.|+|||||+-. +| .++||+|++.
T Consensus 215 ~iCag~~~~~~~~~~~C~GDSGGPLv~~~~~~~~~~l~GIvS~g~ 259 (289)
T 2bdy_A 215 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE 259 (289)
T ss_dssp EEEECCCGGGCCCCBCCTTCTTCEEEEECTTTCCEEEEEEEEECS
T ss_pred EEeccCCCCCCCCCccCCCCCccceEEEECCCCCEEEEEEEEECC
Confidence 45542 357899999999842 34 5999999864
No 117
>1zyo_A Serine protease; beta-barrel, glutamyl endopeptidase, hydrolase; 2.40A {Sesbania mosaic virus}
Probab=99.14 E-value=2.8e-10 Score=101.17 Aligned_cols=142 Identities=18% Similarity=0.149 Sum_probs=89.7
Q ss_pred CceEEEEEeeeccCccccccccCCCeEEEEEEEcCCC--EEEecccccCCCCeEEEEecCCCeEe-----eEEEEECCCC
Q 016647 127 PSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKG--HVVTNYHVIRGASDIRVTFADQSAYD-----AKIVGFDQDK 199 (385)
Q Consensus 127 ~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G--~ILT~aHvv~~~~~i~V~~~dg~~~~-----a~vv~~d~~~ 199 (385)
++||.|.... .-.|.|+.+..+| ++|||+||+.+.....+...+++.++ ......|+..
T Consensus 16 ~svv~l~~~d--------------~h~G~g~~V~~~G~~~LlTA~Hv~~~~~~~~~~~k~g~~ip~~~~~~~~~~~d~~~ 81 (191)
T 1zyo_A 16 ASLVAIKSGP--------------TTIGFGCRTKIDGEDCLLTAHHVWCNSMRPTGLAKAGKQVSVEDWEISMSSSDKML 81 (191)
T ss_dssp SSEEEEEETT--------------EEEEEEEEEEC--CEEEEECHHHHTSSSCCCEEEETTEEEECCSCEEEEEECCTTT
T ss_pred CeEEEEEeCC--------------eEEEEEEEEEECCCcEEEEChhhCcCCcceeeecCCCCEEEcccceeeEccCCCCC
Confidence 4588887611 2378899886444 89999999977532222234554443 3344456789
Q ss_pred CeEEEEEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCC
Q 016647 200 DVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 276 (385)
Q Consensus 200 DlAlLkv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~ 276 (385)
|+||+++.... .....+.+. ....++.|.++|++.........|+.. . . .....+.+++...+
T Consensus 82 D~all~vp~~~~s~lg~~~a~~~---~~~~~~~vt~yg~~~~~~~~s~~g~~~----~-~------~~~~~~~~~~~T~~ 147 (191)
T 1zyo_A 82 DFAIVRVPTHVWSKLGVKSTPLV---CPSSKDVITCYGGSSSDCLMSGVGSSS----T-S------EFTWKLTHTCPTAA 147 (191)
T ss_dssp CEEEEECCHHHHHHHTCCCCCBC---CCCSCEEEEEEEESSTTSEEEEEEEEE----E-C------SSTTEEEECCCCCT
T ss_pred cEEEEEcCCChhhhcCcceeEee---cCCCCccEEEEeecCCCCEeeccccee----e-c------cCCcEEEEEcCCCC
Confidence 99999997432 123344442 233589999999875433222233111 0 0 11356888899999
Q ss_pred CCCCceeeCCCccEEEEeecc
Q 016647 277 GNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~~ 297 (385)
|.||+|+||.+ .+|||+...
T Consensus 148 G~SGsP~~ng~-~IVGvh~G~ 167 (191)
T 1zyo_A 148 GWSGTPLYSSR-GVVGMHVGF 167 (191)
T ss_dssp TCTTCEEECSS-CEEEEEEEE
T ss_pred CCCCCcEEcCC-eEEEEEeCc
Confidence 99999999975 788999875
No 118
>2i6v_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.63A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.13 E-value=1e-10 Score=90.75 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=54.3
Q ss_pred ccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 319 STKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 319 ~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
+.++++++||++||+|++|||++|.++.++.+++...++|++++++|.|+|+.+++++++
T Consensus 28 ~~s~A~~aGl~~GD~I~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 87 (87)
T 2i6v_A 28 DPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 87 (87)
T ss_dssp CHHHHHHTTCCTTCEEEEETTEETTCHHHHHHHHHTGGGCSEEEEEEEETTEEEEEEEEC
T ss_pred CCCHHHHCCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEC
Confidence 556678999999999999999999999999999987778999999999999998888764
No 119
>2b9l_A Prophenoloxidase activating factor; CLIP domain, easter, innate immunity, melanin, immune system binding complex; HET: NAG FUC; 2.00A {Holotrichia diomphalia}
Probab=99.13 E-value=4.6e-10 Score=111.12 Aligned_cols=147 Identities=19% Similarity=0.201 Sum_probs=91.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC----CeEEEEecCC-----------CeEeeEEEEECC-------CCCeEEEEEcC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA----SDIRVTFADQ-----------SAYDAKIVGFDQ-------DKDVAVLRIDA 208 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~----~~i~V~~~dg-----------~~~~a~vv~~d~-------~~DlAlLkv~~ 208 (385)
...|.|.+|+++ ||||+|||+.+. ..+.|++..- ..+..+-+..++ .+|||||+++.
T Consensus 161 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALL~L~~ 239 (394)
T 2b9l_A 161 QLVCGGSLIAPS-VVLTGAHCVNSYQSNLDAIKIRAGEWDTLTEKERLPYQERKIRQVIIHSNFNPKTVVNDVALLLLDR 239 (394)
T ss_dssp SEEEEEEEEETT-EEEECHHHHGGGTTCGGGEEEEESCCBTTCCCSSSCCEEEEEEEEEECTTCCTTTCTTCCEEEEESS
T ss_pred ceEeeEEEEeCC-EEEeccceecCCCCCcccEEEEeceeeccCCcCCCccEEEEEEEEEECCCCCCCccccceEEEEecC
Confidence 357999999987 999999999753 4578887531 223444444443 35999999987
Q ss_pred CC---CCCcceecCCCCCCCCCCEEEEEeCCCCCC-------CceEEeEEeeeeeeeccC-----CCC---CCcccEEEE
Q 016647 209 PK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD-------HTLTTGVISGLRREISSA-----ATG---RPIQDVIQT 270 (385)
Q Consensus 209 ~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~-------~~~~~G~Vs~~~~~~~~~-----~~~---~~~~~~i~~ 270 (385)
+. +.+.|+.|........++.+++.||..... .......+.-+....+.. ..+ .....++..
T Consensus 240 pv~~~~~v~PicLp~~~~~~~~~~~~v~GWG~t~~~~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~~~i~~~~iCA 319 (394)
T 2b9l_A 240 PLVQADNIGTICLPQQSQIFDSTECFASGWGKKEFGSRHRYSNILKKIQLPTVDRDKCQADLRNTRLGLKFVLDQTFVCA 319 (394)
T ss_dssp CCBCCTTCCCCBCCCTTCCCCCSCEEEEECCTTTTTCTTSSCCBCEEEEECEECHHHHHHHHHTTTTCTTCCCCTTEEEE
T ss_pred ccccCCceeeeEcCCcccCccCCEEEEEeccCccCCCCCcccccceEEEEEEECHHHHHHHHhhcccccceecCCCEEEe
Confidence 64 356788886554455678999999974321 122333333222221110 000 011234443
Q ss_pred c----cccCCCCCCceeeCC----Cc--cEEEEeeccc
Q 016647 271 D----AAINPGNSGGPLLDS----SG--SLIGINTAIY 298 (385)
Q Consensus 271 d----~~i~~G~SGGPlvn~----~G--~VVGI~s~~~ 298 (385)
. ...|.|+|||||+-. +| .++||+|++.
T Consensus 320 g~~~g~d~C~GDSGGPLv~~~~~~~~~~~lvGIvS~G~ 357 (394)
T 2b9l_A 320 GGEQGKDTCTGDGGSPLFCPDPRNPSRYMQMGIVAWGI 357 (394)
T ss_dssp CCBSSCSCCSSCTTCEEEEEETTEEEEEEEEEEESCTT
T ss_pred eCCCCCcCCCCCcchhhEEEEcCCCCeEEEEEEEEECC
Confidence 2 357899999999842 23 5899999864
No 120
>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}
Probab=99.13 E-value=4.1e-10 Score=107.95 Aligned_cols=146 Identities=15% Similarity=0.072 Sum_probs=90.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC------CCeEeeEEEEECC-------CCCeEEEEEcCCC---CCCc
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---DKLR 214 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~~~~ 214 (385)
...++|.||+++ ||||+|||+.+...+.|.+.. ++.+..+-+..++ .+||||||++.+. ..+.
T Consensus 117 ~~~CgGtLIs~~-~VLTAAHC~~~~~~~~V~~G~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~DIALl~L~~pv~~~~~v~ 195 (317)
T 3h5c_B 117 KDFCGGVIIREN-FVLTTAKCSLLHRNITVKTYFNRTSQDPLMIKITHVHVHMRYDADAGENDLSLLELEWPIQCPGAGL 195 (317)
T ss_dssp CEEEEEEEEETT-EEEECHHHHHSCSSCEEEECTTSCTTSCEEEEEEEEEECTTCBTTTTBSCCEEEEESSCCCTTTSCC
T ss_pred ceeeeeEEeeCC-EEEEChHhcCcCCceEEEEeeecCCCCcEEEEeeEEEECCCCCCCCCCCCeEEEEeCCcccCCCCcc
Confidence 457999999987 999999999887788888753 2345555555554 4599999998764 2466
Q ss_pred ceecCCCC----CCCCCCEEEEEeCCCCCC---CceEEeEEeeeeeeeccCC-CCCCcccEEEE--ccccCCCCCCceee
Q 016647 215 PIPIGVSA----DLLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAA-TGRPIQDVIQT--DAAINPGNSGGPLL 284 (385)
Q Consensus 215 ~l~l~~~~----~~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~~-~~~~~~~~i~~--d~~i~~G~SGGPlv 284 (385)
|+.|.... .+..|+.+++.||..... .......+.-+........ ........+.. ....+.|+|||||+
T Consensus 196 picLp~~~~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~v~~~~~~~C~~~~~~~~~~~~~Ca~~~~~~~~gDsGgPl~ 275 (317)
T 3h5c_B 196 PVCTPEKDFAEHLLIPRTRGLLSGWARNGTDLGNSLTTRPVTLVEGEECGQVLNVTVTTRTYCERSSVAAMHWMDGSVVT 275 (317)
T ss_dssp CCBCCCHHHHHHTTTTTSCEEEEBCCTTCCSSSCCCBCCEEEEECHHHHHHHHTCCCCTTEEEEECSCCCCCCCTTCEEE
T ss_pred ceeCCCcccccccccCCCeEEEEecCCCCCCCCccceEEEEEEECHHHHhhhhcCcCCCceeECCCCCCCcCCCCCCCEE
Confidence 77775432 356799999999975211 1122222222221111100 00111233332 22345789999998
Q ss_pred C-CCcc--EEEEeecc
Q 016647 285 D-SSGS--LIGINTAI 297 (385)
Q Consensus 285 n-~~G~--VVGI~s~~ 297 (385)
. .+|+ |+||+++.
T Consensus 276 ~~~~~~~~l~Gi~S~g 291 (317)
T 3h5c_B 276 REHRGSWFLTGVLGSQ 291 (317)
T ss_dssp EEETTEEEEEEEECCC
T ss_pred EecCCEEEEEEEEEEC
Confidence 5 3454 99999874
No 121
>1zjk_A Mannan-binding lectin serine protease 2; beta barrel, modular protein, hydrolase; 2.18A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1 PDB: 1q3x_A
Probab=99.11 E-value=1.2e-09 Score=108.34 Aligned_cols=144 Identities=17% Similarity=0.184 Sum_probs=90.1
Q ss_pred EEEEEEEcCCCEEEecccccCC----CCeEEEEecCC-------CeEeeEEEEECC--------CCCeEEEEEcCCC---
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRG----ASDIRVTFADQ-------SAYDAKIVGFDQ--------DKDVAVLRIDAPK--- 210 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~----~~~i~V~~~dg-------~~~~a~vv~~d~--------~~DlAlLkv~~~~--- 210 (385)
.+.|.||+++ ||||+|||+.+ ...+.|.+..- ..+..+-+..++ .+||||||++.+.
T Consensus 184 ~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~V~~G~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~DIALl~L~~~v~~~ 262 (403)
T 1zjk_A 184 TAAGALLYDN-WVLTAAHAVYEQKHDASALDIRMGTLKRLSPHYTQAWSEAVFIHEGYTHDAGFDNDIALIKLNNKVVIN 262 (403)
T ss_dssp CEEEEEETTT-EEEECHHHHGGGTTCSTTEEEEESCSBTTCSCCEEEEEEEEEECTTCCTTSCCTTCCEEEEESSCCCCB
T ss_pred ceEEEEecCC-EEEEcHHhCCCCCCCcceEEEEccccccCCCCceEEeEEEEEECCCCCCCCCCcccEEEEEeCCcCcCC
Confidence 5999999987 99999999964 45677887542 233444444432 4699999998764
Q ss_pred CCCcceecCCCCC---CCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeecc--CCC-----CCCcccEEEE-----c
Q 016647 211 DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISS--AAT-----GRPIQDVIQT-----D 271 (385)
Q Consensus 211 ~~~~~l~l~~~~~---~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~--~~~-----~~~~~~~i~~-----d 271 (385)
..+.|+.|..... +..|+.+++.||..... .......+.-+....+. +.. .......+.. .
T Consensus 263 ~~v~picLp~~~~~~~~~~~~~~~v~GWG~~~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~i~~~~~Cag~~~~~ 342 (403)
T 1zjk_A 263 SNITPICLPRKEAESFMRTDDIGTASGWGLTQRGFLARNLMYVDIPIVDHQKCTAAYEKPPYPRGSVTANMLCAGLESGG 342 (403)
T ss_dssp TTBCCCBCCCGGGGGGSSTTCEEEEEESCTTSSSCCCSBCEEEEEEEECHHHHHHHTTSSSCCSSCSCTTEEEECCSSCC
T ss_pred CceecccCCCcccccccCCCCeEEEEcCCcCCCCccCcccEEEEEeEeCHHHHhhhhhccccccCcCCCCeEeeccCCCC
Confidence 3567777764332 56799999999975432 12233333322222111 100 0112334444 2
Q ss_pred cccCCCCCCceeeCC---Cc--cEEEEeecc
Q 016647 272 AAINPGNSGGPLLDS---SG--SLIGINTAI 297 (385)
Q Consensus 272 ~~i~~G~SGGPlvn~---~G--~VVGI~s~~ 297 (385)
...+.|+|||||+-. +| .|+||+|++
T Consensus 343 ~~~C~GDSGGPL~~~~~~~~~~~l~GIvS~g 373 (403)
T 1zjk_A 343 KDSCRGDSGGALVFLDSETERWFVGGIVSWG 373 (403)
T ss_dssp TTSCSCSTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred CCCCcCCCCccEEEEECCCCcEEEEEEEEEC
Confidence 357899999999842 34 599999986
No 122
>1md8_A C1R complement serine protease; innate immunity, activation, substrate specificity, hydrolase; 2.80A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 PDB: 1md7_A*
Probab=99.11 E-value=8.8e-10 Score=106.45 Aligned_cols=146 Identities=17% Similarity=0.208 Sum_probs=87.5
Q ss_pred eEEEEEEEcCCCEEEecccccCC-------CCeEEEEecCCC--------eEeeEEEEECC----------CCCeEEEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRG-------ASDIRVTFADQS--------AYDAKIVGFDQ----------DKDVAVLRI 206 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~-------~~~i~V~~~dg~--------~~~a~vv~~d~----------~~DlAlLkv 206 (385)
..|.|.+|+++ ||||+|||+.. ...+.|.+.... .+..+-+..++ .+|||||++
T Consensus 111 ~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~V~~G~~~~~~~~~~~~~~V~~i~~Hp~y~~~~~~~~~nDIALl~L 189 (329)
T 1md8_A 111 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 189 (329)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCCEEESCSBHHHHHHHCCCCEEEEEECSSCCSSCTTCCTTCCEEEEE
T ss_pred CCcceEEecCC-EEEecCCEEEeCCcccCCCceEEEEeccccccccccccceeeEEEEECCCcccccCCCCCccEEEEEE
Confidence 36999999987 99999999963 234567665321 23344333332 359999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCCEEEEEeCCCCCC---CceEEeEEeeeeeeeccC-----C-CCCCcccEEEE---
Q 016647 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSA-----A-TGRPIQDVIQT--- 270 (385)
Q Consensus 207 ~~~~---~~~~~l~l~~~~~-~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~-----~-~~~~~~~~i~~--- 270 (385)
+.+. ..+.|+.|..... ...|..+++.||..... .......+.-+....+.. . ........+..
T Consensus 190 ~~~v~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~L~~~~v~i~~~~~C~~~~~~~~~~~~~~~~~iCAg~~ 269 (329)
T 1md8_A 190 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 269 (329)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECCBCSSSBCSBCEEEEEEBCCHHHHHHHHHHTTCCCCCCTTEEEESCT
T ss_pred CCcccCCCceEccccCCCccccCCCCEEEEEeCCCCCCCCCccceEEEEEEcCHHHHHHHhhcccccccCCCCeEeeecC
Confidence 8764 3467777864432 35789999999974332 122333333222211110 0 00111234444
Q ss_pred --ccccCCCCCCceeeCC---Cc--cEEEEeeccc
Q 016647 271 --DAAINPGNSGGPLLDS---SG--SLIGINTAIY 298 (385)
Q Consensus 271 --d~~i~~G~SGGPlvn~---~G--~VVGI~s~~~ 298 (385)
....|.|+|||||+-. +| .++||+|++.
T Consensus 270 ~~~~d~C~GDSGGPL~~~~~~~~~~~l~GIvS~G~ 304 (329)
T 1md8_A 270 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 304 (329)
T ss_dssp TCSCBCCTTTTTCEEEEEETTTTEEEEEEEEEECS
T ss_pred CCCCcCCCCccccceEEEECCCCcEEEEEEEEECC
Confidence 2357899999999842 23 4899999864
No 123
>1elv_A Complement C1S component; trypsin-like serin protease, CCP (OR sushi or SCR)module, HY; HET: NAG FUC NES; 1.70A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1
Probab=99.09 E-value=1.5e-09 Score=104.82 Aligned_cols=145 Identities=17% Similarity=0.150 Sum_probs=86.4
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecCC-------CeEee---EEEEEC--------------CCCCeEEEEEcC
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-------SAYDA---KIVGFD--------------QDKDVAVLRIDA 208 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-------~~~~a---~vv~~d--------------~~~DlAlLkv~~ 208 (385)
.+.|.||+++ ||||+|||+.+.....|.+... ..+.. +-+..+ ..+||||||++.
T Consensus 104 ~CgGsLIs~~-~VLTAAHC~~~~~~~~v~~G~~~~~~~~~~~~~v~~v~~i~~Hp~y~~~~~~~~~~~~~nDIALl~L~~ 182 (333)
T 1elv_A 104 WAGGALINEY-WVLTAAHVVEGNREPTMYVGSTSVQTSRLAKSKMLTPEHVFIHPGWKLLAVPEGRTNFDNDIALVRLKD 182 (333)
T ss_dssp EEEEEEEETT-EEEECHHHHTTCSSCCEECSCSBCC-------CEECEEEEEECTTSCCCSSCTTCCCCTTCCEEEEESS
T ss_pred ceeEEEecCC-EEEehhheeCCCCCCeEEEeeeecccCccceeeeeccceEEECCCCcccccccccCCCcceEEEEEeCC
Confidence 6999999987 9999999998765555555331 12222 333332 246999999997
Q ss_pred CC---CCCcceecCCCCC---CCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCCC----------CCcccEE
Q 016647 209 PK---DKLRPIPIGVSAD---LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG----------RPIQDVI 268 (385)
Q Consensus 209 ~~---~~~~~l~l~~~~~---~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~----------~~~~~~i 268 (385)
+. ..+.|+.|..... +..|+.+++.||..... .......+.-+....+..... ......+
T Consensus 183 ~v~~~~~v~PicLp~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~v~~~~~C~~~~~~~~~~~~~~~~~~~~~~ 262 (333)
T 1elv_A 183 PVKMGPTVSPICLPGTSSDYNLMDGDLGLISGWGRTEKRDRAVRLKAARLPVAPLRKCKEVKVEKPTADAEAYVFTPNMI 262 (333)
T ss_dssp CCCCBTTBCCCBCCCSSGGGCCCTTCEEEEEESCCCSSCSSCSBCEEEEEEEECHHHHHTC----------CCCCCTTEE
T ss_pred CCcCCCcccceecCCCcccccccCCcEEEEEECcCcCCCCcCceeEEEEEEEEcHHHhhhhhhcccccccccccCCCCeE
Confidence 64 3567777764331 45699999999975322 122333333222221111000 1112344
Q ss_pred EE----ccccCCCCCCceeeCC---Cc---cEEEEeeccc
Q 016647 269 QT----DAAINPGNSGGPLLDS---SG---SLIGINTAIY 298 (385)
Q Consensus 269 ~~----d~~i~~G~SGGPlvn~---~G---~VVGI~s~~~ 298 (385)
.. ....|.|+|||||+-. +| .++||+|++.
T Consensus 263 Cag~~~~~~~C~GDSGGPL~~~~~~~~~~~~l~GIvS~g~ 302 (333)
T 1elv_A 263 CAGGEKGMDSCKGDSGGAFAVQDPNDKTKFYAAGLVSWGP 302 (333)
T ss_dssp EEECSTTCBCCTTCTTCEEEEECSSCTTCEEEEEEEEECS
T ss_pred CccCCCCCCcCcCcCCCceEEEECCCCcEEEEEEEEeeCC
Confidence 43 2357899999999852 23 4999999863
No 124
>2vnt_A Urokinase-type plasminogen activator; UPA, inhibitor complex, hydrolase; HET: QGG; 2.2A {Homo sapiens}
Probab=99.09 E-value=5.7e-09 Score=97.56 Aligned_cols=163 Identities=17% Similarity=0.180 Sum_probs=93.0
Q ss_pred CCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CCeEeeEEE
Q 016647 126 TPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIV 193 (385)
Q Consensus 126 ~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv 193 (385)
-|-+|.|........ ....|.|.||+++ ||||+|||+.+. ..+.|.+.. +..+..+.+
T Consensus 35 ~Pw~v~l~~~~~~~~---------~~~~CgGsLIs~~-~VLTAAHCv~~~~~~~~~~v~~g~~~~~~~~~~~~~~~v~~i 104 (276)
T 2vnt_A 35 QPWFAAIYRRHRGGS---------VTYVCGGSLMSPC-WVISATHCFIDYPKKEDYIVYLGRSRLNSNTQGEMKFEVENL 104 (276)
T ss_dssp STTEEEEEEECSSSC---------EEEEEEEEEEETT-EEEECGGGTTTCCCGGGEEEEESCCBSSSCCTTCEEEEEEEE
T ss_pred CCcEEEEEEecCCCc---------ceeEEEEEEeeCC-EEEECcccccCCCCCccEEEEeeeeeccCCCCceEEEEEEEE
Confidence 467777755322111 1236999999987 999999999653 335555532 223444544
Q ss_pred EECC---------CCCeEEEEEcCCC-------CCCcceecCCC-CCCCCCCEEEEEeCCCCCCC------ceEEeEEee
Q 016647 194 GFDQ---------DKDVAVLRIDAPK-------DKLRPIPIGVS-ADLLVGQKVYAIGNPFGLDH------TLTTGVISG 250 (385)
Q Consensus 194 ~~d~---------~~DlAlLkv~~~~-------~~~~~l~l~~~-~~~~~G~~V~~iG~p~g~~~------~~~~G~Vs~ 250 (385)
..++ ..|||||+++.+. ..+.++.|... ..+..|+.+.+.||...... ......+.-
T Consensus 105 ~~Hp~y~~~~~~~~~Diall~L~~~~~~~~~~~~~v~picL~~~~~~~~~~~~~~~~g~G~~~~~~~~~~~~l~~~~~~i 184 (276)
T 2vnt_A 105 ILHKDYSADTLAHHNDIALLKIRSKEGRCAQPSRTIQTICLPSMYNDPQFGTSCEITGFGKENSTDYLYPEQLKMTVVKL 184 (276)
T ss_dssp EECTTCEECSSCEESCCEEEEEECTTSCCCCCCSSCCCCBCCCSSCCCCTTCEEEEEESCCSSTTCSCCCSBCEEEEEEE
T ss_pred EEccccccccccccchhhhhhhhccccccccCcccccccccccccccccccceEEEEEeeccccCCCCcchhheeeeeeE
Confidence 4443 3599999997532 24566666533 34677999999998754321 112222222
Q ss_pred eeeeeccCCCC---CCcccEEEE-----ccccCCCCCCceeeC-CCc--cEEEEeeccc
Q 016647 251 LRREISSAATG---RPIQDVIQT-----DAAINPGNSGGPLLD-SSG--SLIGINTAIY 298 (385)
Q Consensus 251 ~~~~~~~~~~~---~~~~~~i~~-----d~~i~~G~SGGPlvn-~~G--~VVGI~s~~~ 298 (385)
+....+..... ......+.. ....|.|+|||||+- .+| .++||+|++.
T Consensus 185 ~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~C~GDSGGPLv~~~~~~~~lvGIvS~G~ 243 (276)
T 2vnt_A 185 ISHRECQQPHYYGSEVTTKMLCAADPQWKTDSCQGDSGGPLVCSLQGRMTLTGIVSWGR 243 (276)
T ss_dssp ECHHHHTSTTTTGGGSCTTEEEEECTTSCCCCCTTCTTCEEEEEETTEEEEEEEEEECS
T ss_pred ecHHHhhhhhccCcccCccceeeccCCCCCCCCCCCCCCeEEEeeCCeEEEEEEEEECC
Confidence 22222211110 111122222 234689999999984 333 4999999864
No 125
>1gpz_A Complement C1R component; hydrolase, activation, innate immunity, modular structure, serine protease; HET: NAG FUC MAN; 2.9A {Homo sapiens} SCOP: b.47.1.2 g.18.1.1 g.18.1.1
Probab=99.07 E-value=2.2e-09 Score=106.05 Aligned_cols=146 Identities=17% Similarity=0.195 Sum_probs=86.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCC-------CeEEEEecCC--------CeEeeEEEEECC----------CCCeEEEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA-------SDIRVTFADQ--------SAYDAKIVGFDQ----------DKDVAVLRI 206 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~-------~~i~V~~~dg--------~~~~a~vv~~d~----------~~DlAlLkv 206 (385)
+.+.|.||+++ ||||+|||+.+. ..+.|.+... ..+..+-+..++ .+||||||+
T Consensus 179 ~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~~~~~v~~G~~~~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~DIALl~L 257 (399)
T 1gpz_A 179 GRGGGALLGDR-WILTAAHTLYPKEHEAQSNASLDVFLGHTNVEELMKLGNHPIRRVSVHPDYRQDESYNFEGDIALLEL 257 (399)
T ss_dssp SEEEEEEETTT-EEEECGGGTSCTTC-----CCCEEEESCSBHHHHHHTCCCCEEEEEECSSCCSSSSSCCTTCCEEEEE
T ss_pred CCeEEEEeCCC-EEEeChhcccccccccCCcceEEEEeccccccccccccccceEEEEECCCCCcCCCCCCCCcEEEEEE
Confidence 46999999987 999999999743 2456766532 123344343332 359999999
Q ss_pred cCCC---CCCcceecCCCCC-CCCCCEEEEEeCCCCCC---CceEEeEEeeeeeeeccCCCC------CCcccEEEE---
Q 016647 207 DAPK---DKLRPIPIGVSAD-LLVGQKVYAIGNPFGLD---HTLTTGVISGLRREISSAATG------RPIQDVIQT--- 270 (385)
Q Consensus 207 ~~~~---~~~~~l~l~~~~~-~~~G~~V~~iG~p~g~~---~~~~~G~Vs~~~~~~~~~~~~------~~~~~~i~~--- 270 (385)
+.+. ..+.|+.|..... ...|..+++.||..... .......+.-+....+..... ......+..
T Consensus 258 ~~~v~~~~~v~picLp~~~~~~~~~~~~~v~GwG~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~~~~~~~~~~Cag~~ 337 (399)
T 1gpz_A 258 ENSVTLGPNLLPICLPDNDTFYDLGLMGYVSGFGVMEEKIAHDLRFVRLPVANPQACENWLRGKNRMDVFSQNMFCAGHP 337 (399)
T ss_dssp SSCCCCBTTBCCCBCCCSGGGGCTTCEEEEEECC-----CCSBCEEEEEEEECHHHHHC-----------CCSEEEEECG
T ss_pred CCcCcCCCceeeeecCCCccccCCCCEEEEEccCCCCCccCccceEEEEEEcCHHHhhhhhhcccccCcCCCCeEecccC
Confidence 8764 3567777865432 35789999999974321 122333333222221111000 011233443
Q ss_pred --ccccCCCCCCceeeCC---Cc--cEEEEeeccc
Q 016647 271 --DAAINPGNSGGPLLDS---SG--SLIGINTAIY 298 (385)
Q Consensus 271 --d~~i~~G~SGGPlvn~---~G--~VVGI~s~~~ 298 (385)
....+.|+|||||+-. ++ .++||+|++.
T Consensus 338 ~~~~d~C~GDSGGPl~~~~~~~~~~~l~GivS~g~ 372 (399)
T 1gpz_A 338 SLKQDACQGDSGGVFAVRDPNTDRWVATGIVSWGI 372 (399)
T ss_dssp GGGGGGGCSCSSCEEEEEETTTTEEEEEEEECCCT
T ss_pred CCCCccCCCCCchHeEEEECCCCeEEEEEEEEeCC
Confidence 2357899999999832 33 5899999864
No 126
>3id1_A Regulator of sigma E protease; hydrolase, cell inner membrane, cell membrane, membrane, metal-binding, metalloprotease, transmembrane; 1.67A {Escherichia coli k-12} PDB: 2zpl_A
Probab=99.02 E-value=6.1e-10 Score=87.92 Aligned_cols=67 Identities=12% Similarity=0.110 Sum_probs=59.1
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECC--EEEEEEEEeecCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGD--QKEKIPVKLEPKP 382 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~~~~ 382 (385)
.+.++++++.+||++||+|++|||++|.++.++.+.+.....|+.+.++|.|+| +.+++++++...+
T Consensus 8 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~d~~~~l~~~~~~~~v~l~v~R~g~~~~~~~~l~l~~~~ 76 (95)
T 3id1_A 8 EIAANSIAAEAQIAPGTELKAVDGIETPDWDAVRLQLVDKIGDESTTITVAPFGSDQRRDVKLDLRHWA 76 (95)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECSSHHHHHHHHHHTTTCSEEEEEEECTTCCCCEEEEEECTTCC
T ss_pred eeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHHhcCCCcEEEEEEECCCCceEEEEEEccccc
Confidence 567889999999999999999999999999999999988777799999999987 4678888876653
No 127
>2i4s_A General secretion pathway protein C; EPSC, GSPC, PDZ domain, type 2 secretion system, protein transport, membrane protein; 1.92A {Vibrio cholerae} SCOP: b.36.1.5
Probab=99.01 E-value=4.1e-10 Score=90.56 Aligned_cols=60 Identities=15% Similarity=0.187 Sum_probs=53.8
Q ss_pred ccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 319 STKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 319 ~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
+.++++.+||++||+|++|||++|.++.++.+++...++|++++++|.|+|+.+++++++
T Consensus 46 pas~A~~aGl~~GDvI~~ing~~v~~~~d~~~~~~~~~~g~~v~l~v~R~g~~~~~~v~l 105 (105)
T 2i4s_A 46 DPVLFESIGLQDGDMAVALNGLDLTDPNVMNTLFQSMNEMTEMSLTVERDGQQHDVYIQF 105 (105)
T ss_dssp CTHHHHHHTCCTTCEEEEETTEETTSTTHHHHHHHHHTTCSEEEEEEEETTEEEEEEEEC
T ss_pred CCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHhcCCCCeEEEEEEECCEEEEEEEeC
Confidence 445668899999999999999999999999999987778999999999999998888764
No 128
>2xxl_A GRAM-positive specific serine protease, isoform B; hydrolase, innate immunity; HET: NAG FUC BMA; 1.80A {Drosophila melanogaster}
Probab=99.01 E-value=5.2e-09 Score=104.02 Aligned_cols=145 Identities=16% Similarity=0.187 Sum_probs=87.7
Q ss_pred eEEEEEEEcCCCEEEecccccCCC--CeEEEEecCC---------------------CeEeeEEEEECC-------CCCe
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFADQ---------------------SAYDAKIVGFDQ-------DKDV 201 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~dg---------------------~~~~a~vv~~d~-------~~Dl 201 (385)
..+.|.+|+++ ||||+|||+.+. ..+.|++.+- ..+..+-+..++ .+||
T Consensus 146 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~lG~~~~~~~~~~~~~~~~~~c~~~~~~~~V~~ii~Hp~y~~~~~~nDI 224 (408)
T 2xxl_A 146 FLCGGAMISER-YILTAAHCVHGLQNDLYEIRLGEHRISTEEDCRQQGRKKKCAPPVVNVGIEKHLIHEKYDARHIMHDI 224 (408)
T ss_dssp EEEEEEEEETT-EEEECGGGTTTCTTTEEEEEESCSBTTCSCCEEEETTEEEECCCCEEEEEEEEEECTTCBTTTTBSCC
T ss_pred EEEEEEEEECC-EEEEcHHhcCCCCCceEEEEeeeeECCCccchhhcccccccCCceEEEeEEEEEeCCCCCccccccce
Confidence 47999999987 999999999754 4577777431 122333333443 3599
Q ss_pred EEEEEcCCC---CCCcceecCCCCC----CCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccCCCC-CCcccEEE
Q 016647 202 AVLRIDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSAATG-RPIQDVIQ 269 (385)
Q Consensus 202 AlLkv~~~~---~~~~~l~l~~~~~----~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~~~~-~~~~~~i~ 269 (385)
|||+++.+. +.+.|+.|..... ...|+.+++.||..... .......+.-+....+..... ......+.
T Consensus 225 ALL~L~~~v~~~~~V~PICLp~~~~~~~~~~~~~~~~v~GWG~t~~~~~s~~L~~~~v~iv~~~~C~~~~~~~~~~~~iC 304 (408)
T 2xxl_A 225 ALLKLNRSVPFQKHIKPICLPITDELKEKAEQISTYFVTGWGTTENGSSSDVLLQANVPLQPRSACSQAYRRAVPLSQLC 304 (408)
T ss_dssp EEEEESSCCCCBTTBCCCBCCCSHHHHHHTTTCSEEEEEECCCBTTBCSCSBCEEEEEEEECHHHHHHHHTSCCCTTEEE
T ss_pred EEEEECCccccccCccccCCCCcccccccccCCCEEEEEEeCcCCCCCCCchheEeeeeecCHHHHHHHhcccCCCceEe
Confidence 999998764 3467777764322 46789999999974322 122233332222211110000 01113344
Q ss_pred Ec----cccCCCCCCcee------eC-CCc--cEEEEeecc
Q 016647 270 TD----AAINPGNSGGPL------LD-SSG--SLIGINTAI 297 (385)
Q Consensus 270 ~d----~~i~~G~SGGPl------vn-~~G--~VVGI~s~~ 297 (385)
.. ...|.|+||||| +. .+| .++||+|++
T Consensus 305 Ag~~~g~d~C~GDSGGPL~~~~~~~~~~~~~~~l~GIvS~G 345 (408)
T 2xxl_A 305 VGGGDLQDSCKGDSGGPLQAPAQYLGEYAPKMVEFGIVSQG 345 (408)
T ss_dssp ECCSCSSSGGGSCTTCEEEEEECCTTCSSCEEEEEEEEEEC
T ss_pred ecCCCCCccCCCcccChhhcCccceEEECCEEEEEEEEEEC
Confidence 32 356789999999 53 233 689999987
No 129
>2zpm_A Regulator of sigma E protease; metalloproteinase, membrane protein, PDZ domain, hydrolase, inner membrane, membrane, metal-binding; HET: MLY MSE; 0.98A {Escherichia coli} PDB: 3id2_A 3id3_A 3id4_A
Probab=99.00 E-value=7e-10 Score=86.48 Aligned_cols=64 Identities=16% Similarity=0.250 Sum_probs=57.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeec
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEP 380 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~ 380 (385)
.+.++++++.+||++||+|++|||++|.++.++.+.+... +|+.+.++|.|+|+.+++++++.+
T Consensus 10 ~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~~-~g~~v~l~v~R~g~~~~~~v~~~~ 73 (91)
T 2zpm_A 10 NVQPNSAASXAGLQAGDRIVXVDGQPLTQWVTFVMLVRDN-PGXSLALEIERQGSPLSLTLIPES 73 (91)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECCCHHHHHHHHHHC-TTCCEEEEEEETTEEEEEEECCEE
T ss_pred EECCCChHHhcCCCCCCEEEEECCeEcCCHHHHHHHHhcC-CCCeEEEEEEECCeEEEEEEEEee
Confidence 4567888999999999999999999999999999999875 899999999999999988888754
No 130
>3nxp_A Prethrombin-1; allostery, blood coagulation, hydro kringle, serine protease, zymogen; HET: NAG; 2.20A {Homo sapiens}
Probab=98.99 E-value=1.5e-09 Score=108.52 Aligned_cols=146 Identities=18% Similarity=0.216 Sum_probs=88.1
Q ss_pred eEEEEEEEcCCCEEEecccccC--------CCCeEEEEecCC----------CeEeeEEEEECC--------CCCeEEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIR--------GASDIRVTFADQ----------SAYDAKIVGFDQ--------DKDVAVLR 205 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~--------~~~~i~V~~~dg----------~~~~a~vv~~d~--------~~DlAlLk 205 (385)
..+.|.||+++ ||||+|||+. ....+.|.+... +.+..+-+..++ .+|||||+
T Consensus 191 ~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~~~~~~~V~lG~~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~~nDIALLk 269 (424)
T 3nxp_A 191 LLCGASLISDR-WVLTAAHCLLYPPWDKNFTENDLLVRIGKHSRTRYERNIEKISMLEKIYIHPRYNWRENLDRDIALMK 269 (424)
T ss_dssp EEEEEEESSSS-EEEECHHHHEEGGGTEECCGGGEEEEESCCBSSSCCTTTCEEECEEEEEECTTCBTTTTSBTCCEEEE
T ss_pred ccceeEEEcCC-EEEEhHHhcCccccccccCcccEEEEeCcccccccCCCceeEEEEEEEEeCCCCCCCCCCcCCeEEEE
Confidence 47999999987 9999999984 334577877432 112333333433 35999999
Q ss_pred EcCCC---CCCcceecCCCCC----CCCCCEEEEEeCCCC---------C--CCceEEeEEeeeeeeeccCCCC-CCccc
Q 016647 206 IDAPK---DKLRPIPIGVSAD----LLVGQKVYAIGNPFG---------L--DHTLTTGVISGLRREISSAATG-RPIQD 266 (385)
Q Consensus 206 v~~~~---~~~~~l~l~~~~~----~~~G~~V~~iG~p~g---------~--~~~~~~G~Vs~~~~~~~~~~~~-~~~~~ 266 (385)
++.+. ..+.++.|..... +..|..+++.||... . ........+.-+....+..... .....
T Consensus 270 L~~pv~~s~~v~PicLp~~~~~~~~~~~g~~~~v~GWG~t~~~~~~~~~~~~~~~L~~~~v~ii~~~~C~~~~~~~i~~~ 349 (424)
T 3nxp_A 270 LKKPVAFSDYIHPVCLPDRETAASLLQAGYKGRVTGWGNLKETWTANVGKGQPSVLQVVNLPIVERPVCKDSTRIRITDN 349 (424)
T ss_dssp ESSCCCCCSSCCCCBCCCHHHHHHHHHHCSEEEEEESSHHHHHHHHC----CCSBCEEEEEEBCCHHHHHHTCSSCCCTT
T ss_pred ecCccccCCcccccCCCCcccccccccCCCeEEEEecCCCCccCccccCCCCCccceEEEeeEEcHHHhhhhccCcCCCC
Confidence 98764 3456777754321 346899999999631 1 1223333333322222211111 11233
Q ss_pred EEEEc--------cccCCCCCCceeeCC---Cc--cEEEEeeccc
Q 016647 267 VIQTD--------AAINPGNSGGPLLDS---SG--SLIGINTAIY 298 (385)
Q Consensus 267 ~i~~d--------~~i~~G~SGGPlvn~---~G--~VVGI~s~~~ 298 (385)
++... ...|.|+|||||+-. +| .|+||+|++.
T Consensus 350 ~iCAg~~~~~~~~~d~C~GDSGGPLv~~~~~~~~~~l~GIvS~G~ 394 (424)
T 3nxp_A 350 MFCAGYKPDEGKRGDACEGDSGGPFVMKSPFNNRWYQMGIVSWGE 394 (424)
T ss_dssp EEEESCCCBTTBCCCTTCSCTTCEEEEECTTTCCEEEEEEECCSS
T ss_pred eEecccCCCCCCCCccCCCcCCCceEEEECCCCcEEEEEEEEeCC
Confidence 45442 257899999999842 34 5899999864
No 131
>4dur_A Plasminogen, serine protease; fibrinolysis, hydrolase; HET: NAG GAL SIA; 2.45A {Homo sapiens} PDB: 4a5t_S* 4duu_A 2feb_A
Probab=98.98 E-value=1.6e-08 Score=108.01 Aligned_cols=147 Identities=18% Similarity=0.252 Sum_probs=90.1
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC---------CeEeeEEEEECC-CCCeEEEEEcCCC---CCCc
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ---------SAYDAKIVGFDQ-DKDVAVLRIDAPK---DKLR 214 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg---------~~~~a~vv~~d~-~~DlAlLkv~~~~---~~~~ 214 (385)
...+.|.||+++ ||||+|||+.+. ..+.|.+... +.+...-+..++ .+|||||+++.+. ..+.
T Consensus 585 ~~~CGGSLIs~~-wVLTAAHCv~~~~~~~~~~V~lG~~~~~~~~~~~q~~~V~~i~~hp~~nDIALLkL~~pv~~s~~V~ 663 (791)
T 4dur_A 585 MHFCGGTLISPE-WVLTAAHCLEKSPRPSSYKVILGAHQEVNLEPHVQEIEVSRLFLEPTRKDIALLKLSSPAVITDKVI 663 (791)
T ss_dssp CEEEEEEEEETT-EEEECGGGGSSCCCGGGCEEEESCCBSSSCCTTCEEEEEEEEEECTTCCSCEEEEESSCCCCCSSCC
T ss_pred CeEEEEEEEeCC-EEEECHHHcCCcCCCceEEEEeccccccCCCCccEEEEEEEEECCCCCCceEEEEecCccccCCcee
Confidence 457999999987 999999999753 4567776431 233344344443 5799999998764 3566
Q ss_pred ceecCCCC-CCCCCCEEEEEeCCCCCC----CceEEeEEeeeeeeeccC---CCCCCcccEEEEc-----cccCCCCCCc
Q 016647 215 PIPIGVSA-DLLVGQKVYAIGNPFGLD----HTLTTGVISGLRREISSA---ATGRPIQDVIQTD-----AAINPGNSGG 281 (385)
Q Consensus 215 ~l~l~~~~-~~~~G~~V~~iG~p~g~~----~~~~~G~Vs~~~~~~~~~---~~~~~~~~~i~~d-----~~i~~G~SGG 281 (385)
++.|.... .+..|..+++.||..... .......+.-+....... .........+... ...+.|+|||
T Consensus 664 PIcLP~~~~~~~~g~~~~vsGWG~t~~~~~s~~L~~~~v~ii~~~~C~~~~~~~~~i~~~~iCAg~~~gg~daC~GDSGG 743 (791)
T 4dur_A 664 PACLPSPNYVVADRTECFITGWGETQGTFGAGLLKEAQLPVIENKVCNRYEFLNGRVQSTELCAGHLAGGTDSCQGDSGG 743 (791)
T ss_dssp CCBCCCTTCCCCTTCEEEEEECCCC---CCTTBCEEEEEEEECHHHHTSTTTTTTCCCTTEEEESCSSSCCCBCCSCTTC
T ss_pred eeeccCcccccCCCCEEEEEEeCCCCCCCCCCeeEEEEEEEeCHHHhhcccccCCCCCCCeEEeccCCCCCCCCCCCccc
Confidence 77775433 356789999999974321 122333333222222211 0111122344432 3467899999
Q ss_pred eeeCC-Cc--cEEEEeeccc
Q 016647 282 PLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 282 Plvn~-~G--~VVGI~s~~~ 298 (385)
||+-. +| .|+||+|++.
T Consensus 744 PLv~~~~~~~~LvGIvS~G~ 763 (791)
T 4dur_A 744 PLVCFEKDKYILQGVTSWGL 763 (791)
T ss_dssp EEEEEETTEEEEEEECCTTT
T ss_pred ceEEEeCCeEEEEEEEEeCC
Confidence 99843 22 5999999864
No 132
>2f83_A Coagulation factor XI; protease, apple domain, hydrolase; HET: NAG; 2.87A {Homo sapiens} PDB: 2j8j_A 2j8l_A
Probab=98.92 E-value=7.5e-09 Score=108.30 Aligned_cols=147 Identities=20% Similarity=0.256 Sum_probs=83.2
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC-
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK- 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~- 210 (385)
...+.|.||+++ ||||+|||+.+. ..+.|.+.. +..+..+-+..++ .+|||||+++.+.
T Consensus 413 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~~~~~V~~ii~Hp~y~~~~~~nDIALlkL~~pv~ 491 (625)
T 2f83_A 413 RHLCGGSIIGNQ-WILTAAHCFYGVESPKILRVYSGILNQSEIKEDTSFFGVQEIIIHDQYKMAESGYDIALLKLETTVN 491 (625)
T ss_dssp EEEEEEEECSSS-EEEECGGGGSSCCCGGGEEEEESCSBGGGCCSSCCCEEEEEEEECTTCCBTTTBCCCEEEEESSCCC
T ss_pred cEEEEEEEECCC-EEEEcHHhCCCCCCCceEEEEEEeccCCCCCCCceEEeEEEEEECCccCcCCccccEEEEEECCccc
Confidence 347999999987 999999999753 346776632 2234555455554 3599999998764
Q ss_pred --CCCcceecCCCC-CCCCCCEEEEEeCCCCCC-----CceEEeEEeeeeeeeccCCCC--CCcccEE-----EEccccC
Q 016647 211 --DKLRPIPIGVSA-DLLVGQKVYAIGNPFGLD-----HTLTTGVISGLRREISSAATG--RPIQDVI-----QTDAAIN 275 (385)
Q Consensus 211 --~~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~-----~~~~~G~Vs~~~~~~~~~~~~--~~~~~~i-----~~d~~i~ 275 (385)
+.+.|+.|.... ....|+.+++.||..... .......+.-+.......... ......+ .-....+
T Consensus 492 ~~~~v~PicLp~~~~~~~~~~~~~v~GWG~~~~~~~~s~~L~~~~v~i~~~~~C~~~~~~~~i~~~~iCag~~~~~~d~C 571 (625)
T 2f83_A 492 YTDSQRPICLPSKGDRNVIYTDCWVTGWGYRKLRDKIQNTLQKAKIPLVTNEECQKRYRGHKITHKMICAGYREGGKDAC 571 (625)
T ss_dssp CBTTBCCCBCCCGGGTTCCCCCEEECBCC------CCCSBCBCCEECCCCHHHHHTTCTTSCCCTTBCCC----------
T ss_pred CCCceeeeEcCCccCCccCCCEEEEEEecCCCCCCcCCcccEEEEEEEcCHHHHHHHhccCCCCCCeEEeecCCCCCcCC
Confidence 345677775433 245688899999874321 112222222222111111000 0001111 1123568
Q ss_pred CCCCCceeeC-CCc--cEEEEeeccc
Q 016647 276 PGNSGGPLLD-SSG--SLIGINTAIY 298 (385)
Q Consensus 276 ~G~SGGPlvn-~~G--~VVGI~s~~~ 298 (385)
.|+|||||+- .+| .|+||++++.
T Consensus 572 ~GDSGGPLv~~~~~~~~lvGIvS~G~ 597 (625)
T 2f83_A 572 KGDSGGPLSCKHNEVWHLVGITSWGE 597 (625)
T ss_dssp CCCTTCEEEEEETTEEEEEEEEEECC
T ss_pred CCCcccceEEEECCeEEEEEEEEeCC
Confidence 9999999984 345 5999999864
No 133
>2xrc_A Human complement factor I; immune system, hydrolase, conglutinogen activating factor, S protease, complement system; HET: NAG; 2.69A {Homo sapiens}
Probab=98.91 E-value=7.9e-09 Score=106.89 Aligned_cols=147 Identities=14% Similarity=0.109 Sum_probs=74.5
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC--CeEEEEecC----------CCeEeeEEEEECC-------CCCeEEEEEcCCCC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA--SDIRVTFAD----------QSAYDAKIVGFDQ-------DKDVAVLRIDAPKD 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~--~~i~V~~~d----------g~~~~a~vv~~d~-------~~DlAlLkv~~~~~ 211 (385)
...+.|.||+++ ||||+|||+.+. ..+.|.+.. ...+.++-+..++ .+|||||+++.+..
T Consensus 344 ~~~CGGsLIs~~-~VLTAAHCv~~~~~~~~~V~~G~~~~~~~~~~~~~~~~V~~ii~Hp~Y~~~~~~nDIALlkL~~~v~ 422 (565)
T 2xrc_A 344 GITCGGIYIGGC-WILTAAHCLRASKTHRYQIWTTVVDWIHPDLKRIVIEYVDRIIFHENYNAGTYQNDIALIEMKKDGN 422 (565)
T ss_dssp SCCCCCEEEETT-EEEECHHHHTTCSSCCEEEEC-------------CEEEEEEEEECTTCCTTTCTTCCEEEEECCCSS
T ss_pred ceeeeEEEEeCC-EEEEChhhcccCCCcceEEEEEEeeccCCCCCccEEEEEEEEEeCCCCCCCcccccceeeeeccccc
Confidence 346899999987 999999999753 346665532 1233444444443 45999999987641
Q ss_pred -------CCcceecCCCC-CCCCCCEEEEEeCCCCCCC----ceEEeEEeeeeeeeccCCCCCCcccEEEEc-----ccc
Q 016647 212 -------KLRPIPIGVSA-DLLVGQKVYAIGNPFGLDH----TLTTGVISGLRREISSAATGRPIQDVIQTD-----AAI 274 (385)
Q Consensus 212 -------~~~~l~l~~~~-~~~~G~~V~~iG~p~g~~~----~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d-----~~i 274 (385)
.+.|+.|.... .+..|+.+++.||...... ......+..+..=...+........++... ...
T Consensus 423 ~~~~~~~~v~PicLp~~~~~~~~g~~~~v~GWG~t~~~~~~~~L~~~~v~i~~~C~~~~~~~~~~~~~iCAg~~~g~~d~ 502 (565)
T 2xrc_A 423 KKDCELPRSIPACVPWSPYLFQPNDTCIVSGWGREKDNERVFSLQWGEVKLISNCSKFYGNRFYEKEMECAGTYDGSIDA 502 (565)
T ss_dssp SSCSCCTTCCCCBCCSCTTSSCTTCEEEEEC-------------CEEEEEECSCTHHHHTTSCCTTTEEEEEEC------
T ss_pred cccccccceeeeecCCcccccCCCCEEEEEeCccCCCCCccceeeEEeeeehHHhHHhhccCcCCCceEEeCCCCCCCcc
Confidence 24566665332 3567999999998743221 111222221110000000000011133321 346
Q ss_pred CCCCCCceeeC--CCcc--EEEEeeccc
Q 016647 275 NPGNSGGPLLD--SSGS--LIGINTAIY 298 (385)
Q Consensus 275 ~~G~SGGPlvn--~~G~--VVGI~s~~~ 298 (385)
+.|+|||||+- .+|+ |+||+|++.
T Consensus 503 C~GDSGGPLv~~~~~~~~~lvGIvS~G~ 530 (565)
T 2xrc_A 503 CKGDSGGPLVCMDANNVTYVWGVVSWGE 530 (565)
T ss_dssp ----CCCEEEEECTTCCEEEEEEECC--
T ss_pred CCCccccceEEEeCCCcEEEEEEEeeCC
Confidence 78999999984 2453 899999864
No 134
>1rrk_A Complement factor B; BB, hydrolase; 2.00A {Homo sapiens} SCOP: b.47.1.2 c.62.1.1 PDB: 1rs0_A* 1rtk_A* 2win_I* 1dle_A
Probab=98.88 E-value=3.5e-09 Score=107.35 Aligned_cols=147 Identities=19% Similarity=0.219 Sum_probs=85.7
Q ss_pred CeEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC-CeEeeEEEEECC----------------CCCeEEEEEcCCC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ-SAYDAKIVGFDQ----------------DKDVAVLRIDAPK 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg-~~~~a~vv~~d~----------------~~DlAlLkv~~~~ 210 (385)
...|.|.+|+++ ||||+|||+.+. ..+.|.+... +.+..+-+..++ .+|||||+++.+.
T Consensus 241 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~v~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~L~~~v 319 (497)
T 1rrk_A 241 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 319 (497)
T ss_dssp CEEEEEEECSSS-EEEECGGGCCTTCCGGGEEEEETTCSSCEEEEEEEECTTCCTTTTGGGTCSSCCTTCCEEEEESSCC
T ss_pred CceeEEEEecCC-EEEECHHhCCCCCCceEEEEEeCCccceeeeEEEEeCCCccccccccccccccCCCcEEEEEECCCC
Confidence 457999999987 999999999753 4688888653 445555444432 3599999998764
Q ss_pred ---CCCcceecCCCC------CCCCCCEEEEEeCCCCC------------CCceEEeEEeeee---eeeccC------CC
Q 016647 211 ---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGL------------DHTLTTGVISGLR---REISSA------AT 260 (385)
Q Consensus 211 ---~~~~~l~l~~~~------~~~~G~~V~~iG~p~g~------------~~~~~~G~Vs~~~---~~~~~~------~~ 260 (385)
..+.|+.|.... .+..|..+++.||.... ........+.-+. ...+.. ..
T Consensus 320 ~~~~~v~picLp~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~~~~~~~L~~~~v~i~~~~~~~~C~~~~~~~~~~ 399 (497)
T 1rrk_A 320 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEELLPAQDIKALFVSEEEKKLTRKEVYIKNGDKKGSCERDAQYAPGY 399 (497)
T ss_dssp CCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEEEESSSCEEEEEEEEECSTTHHHHHHGGGGSTTC
T ss_pred cCCCCeeeeeCCCCCccccccccCCCCchhcccccccCCccccceeeccCCCcceeeeEEEecCcccchhhhhhhhcccc
Confidence 356778876432 23455554444432111 1122222222111 011110 00
Q ss_pred -------CCCcccEEEEc-------cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 261 -------GRPIQDVIQTD-------AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 261 -------~~~~~~~i~~d-------~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
.......+... ...|.|+|||||+-. +| .++||+|++.
T Consensus 400 ~~~~~~~~~~~~~~iCag~~~~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~g~ 454 (497)
T 1rrk_A 400 DKVKDISEVVTPRFLCTGGVSPYADPNTCRGDSGGPLIVHKRSRFIQVGVISWGV 454 (497)
T ss_dssp TTCSCGGGTSCTTEEEEESSSSSCCCCCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred cccccccccCCCCeEEeCCCCCCCCCcCCCCCCCCeeEEEeCCEEEEEEEEEecC
Confidence 01123455543 247899999999843 34 4999999875
No 135
>2pzd_A Serine protease HTRA2; PDZ domain, apoptosis, mitochondria, peptid module, hydrolase; 2.75A {Homo sapiens} SCOP: b.36.1.4
Probab=98.86 E-value=3.2e-09 Score=86.21 Aligned_cols=65 Identities=20% Similarity=0.312 Sum_probs=56.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.+.++++++.+||++||+|++|||++|.+..++.+++.. |+.+.++|.|+|+.+++++++.+.+.
T Consensus 41 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~~---~~~v~l~v~R~g~~~~~~v~~~~~~~ 105 (113)
T 2pzd_A 41 KVILGSPAHRAGLRPGDVILAIGEQMVQNAEDVYEAVRT---QSQLAVQIRRGRETLTLYVTPEVTEG 105 (113)
T ss_dssp EEBTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHHH---CSSEEEEEEETTEEEEEEECCEEC--
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECCCHHHHHHHHhC---CCeEEEEEEECCEEEEEEEEEeeccC
Confidence 456788999999999999999999999999999998875 68899999999999999998876543
No 136
>2vz5_A TAX1-binding protein 3; WNT signaling pathway, protein binding, nucleus, cytoplasm, PDZ domain; 1.74A {Homo sapiens} PDB: 3dj1_A 3diw_A 2l4s_A 2l4t_A 3gj9_A 2kg2_A 3dj3_A
Probab=98.86 E-value=2.8e-09 Score=90.11 Aligned_cols=66 Identities=17% Similarity=0.209 Sum_probs=52.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKP 382 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 382 (385)
.+.++++|+++||++||+|++|||++|. +..++.+++.. .+|++++|+|.|+|+..++++++...+
T Consensus 70 ~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~v~~~~~~~~ 137 (139)
T 2vz5_A 70 RVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTK-RSEEVVRLLVTRQSLQKAVQQSMLSET 137 (139)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHCC-TTCSEEEEEEEECC-------CCCCCC
T ss_pred EECCCCHHHHCCCCCCCEEEEECCEEcCCCCHHHHHHHHHh-CCCCEEEEEEEECCEEEEEEEeeceec
Confidence 4568899999999999999999999999 58999999987 789999999999999999888876644
No 137
>2p3w_A Probable serine protease HTRA3; PDZ domain, phage derived high affinity ligand, protein BIND; 1.70A {Homo sapiens}
Probab=98.84 E-value=2.7e-09 Score=86.59 Aligned_cols=65 Identities=23% Similarity=0.331 Sum_probs=57.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.+.++++++.+||++||+|++|||++|.++.++.+++. +|+.+.++|.|+|+.+++++++.+.++
T Consensus 41 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~l~---~g~~v~l~v~R~g~~~~~~v~~~~~~~ 105 (112)
T 2p3w_A 41 EVAPNSPSQRGGIQDGDIIVKVNGRPLVDSSELQEAVL---TESPLLLEVRRGNDDLLFSIAPEVVMG 105 (112)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHHH---HCSSEEEEEEETTEEEEEEECCEEECT
T ss_pred EECCCChHHHCCCCCCCEEEEECCEECCCHHHHHHHHh---CCCeEEEEEEECCEEEEEEEEEeeeCC
Confidence 34577889999999999999999999999999998883 588999999999999999988876553
No 138
>1ihj_A INAD; intermolecular disulfide bond, PDZ domain, signaling protein; 1.80A {Drosophila melanogaster} SCOP: b.36.1.1
Probab=98.82 E-value=9.2e-09 Score=81.18 Aligned_cols=53 Identities=25% Similarity=0.385 Sum_probs=46.3
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.++ .++.+++.. +|++++|+|+|+|+
T Consensus 43 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~g~ 98 (98)
T 1ihj_A 43 GIVPDSPAHLCGRLKVGDRILSLNGKDVRNSTEQAVIDLIKE--ADFKIELEIQTFDK 98 (98)
T ss_dssp EECTTSHHHHHCSCCTTCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEEC--
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Confidence 566889999999 999999999999999997 788888876 79999999999875
No 139
>2odp_A Complement C2; C3/C5 convertase, complement serin protease, human complement system, glycoprotein, SP, VWFA,; HET: NAG; 1.90A {Homo sapiens} PDB: 2odq_A* 2i6q_A* 2i6s_A*
Probab=98.80 E-value=1.9e-09 Score=109.78 Aligned_cols=148 Identities=16% Similarity=0.187 Sum_probs=80.2
Q ss_pred CCeEEEEEEEcCCCEEEecccccCCC---CeEEEEecCC-----CeEeeEEEEECC----------------CCCeEEEE
Q 016647 150 PQGSGSGFVWDSKGHVVTNYHVIRGA---SDIRVTFADQ-----SAYDAKIVGFDQ----------------DKDVAVLR 205 (385)
Q Consensus 150 ~~~~GSGfiI~~~G~ILT~aHvv~~~---~~i~V~~~dg-----~~~~a~vv~~d~----------------~~DlAlLk 205 (385)
....|.|.+|+++ ||||+|||+.+. ..+.|.+.+. +.+..+-+..++ .+|||||+
T Consensus 245 ~~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALl~ 323 (509)
T 2odp_A 245 SQETCRGALISDQ-WVLTAAHCFRDGNDHSLWRVNVGDPKSQWGKEFLIEKAVISPGFDVFAKKNQGILEFYGDDIALLK 323 (509)
T ss_dssp ---CEEEEECSSS-EEEECGGGC--------CEEEECCTTCTTCEEECEEEEEECTTCCTTTTGGGTCCCCCTTCCEEEE
T ss_pred CCcEEEEEEEcCC-EEEEcHHHcCCCCCcceEEEEeCCcccCCCceeeeEEEEECCCCccccccccccccccCCCeEEEE
Confidence 3457999999987 999999999753 4567777542 344555444432 36999999
Q ss_pred EcCCC---CCCcceecCCCC------CCCCCCEEEEEeCCCCCCCce------------EEeEEeeeeeeeccC------
Q 016647 206 IDAPK---DKLRPIPIGVSA------DLLVGQKVYAIGNPFGLDHTL------------TTGVISGLRREISSA------ 258 (385)
Q Consensus 206 v~~~~---~~~~~l~l~~~~------~~~~G~~V~~iG~p~g~~~~~------------~~G~Vs~~~~~~~~~------ 258 (385)
++.+. ..+.|+.|.... ....|..+.+.||........ ...++..+....+..
T Consensus 324 L~~~v~~~~~v~picLp~~~~~~~~~~~~~g~~~~~~g~g~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~C~~~~~~~~ 403 (509)
T 2odp_A 324 LAQKVKMSTHARPICLPCTMEANLALRRPQGSTCRDHENELLNKQSVPAHFVALNGSKLNINLKMGVEWTSCAEVVSQEK 403 (509)
T ss_dssp ESSCCCCBTTBCCCBCTTBHHHHHHTTCCTTCCHHHHHHHHSCSSEEEEEEECTTSCEEEEEEECTHHHHHHHHGGGGCT
T ss_pred ECCcccCCCCcccccCCCCcccchhhccCCCCccccccccccccccceeeeecccCceeeEEEecCccHHHHHHHhhccc
Confidence 98764 346677775321 124466555555432111111 111111001111110
Q ss_pred ---C-----CCCCcccEEEEc----cccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 259 ---A-----TGRPIQDVIQTD----AAINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 259 ---~-----~~~~~~~~i~~d----~~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
. ........+... ...|.|+|||||+-. +| .++||+|++.
T Consensus 404 ~~~~~~~~~~~~~~~~~iCag~~~~~~~C~GDSGGPL~~~~~~~~~l~GIvS~G~ 458 (509)
T 2odp_A 404 TMFPNLTDVREVVTDQFLCSGTQEDESPCKGESGGAVFLERRFRFFQVGLVSWGL 458 (509)
T ss_dssp TTCTTCSSGGGTSCTTEEEECCTTCCCCCGGGTTCEEEEEETTEEEEEEEEEEES
T ss_pred ccccccccccccccCCEEEeCCCCCCcccCCCccCceEEEECCeEEEEEEEEEcC
Confidence 0 001123445543 357899999999853 23 4999999875
No 140
>2eaq_A LIM domain only protein 7; conserved hypothetical protein, structural genomics, NPPSFA; 1.46A {Homo sapiens}
Probab=98.80 E-value=3.4e-09 Score=82.35 Aligned_cols=55 Identities=13% Similarity=0.276 Sum_probs=49.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+||++||+|++|||++| .++.++.+++...++|+++.|+|+|+|+
T Consensus 34 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 90 (90)
T 2eaq_A 34 SVEAGSPAEFSQLQVDDEIIAINNTKFSYNDSKEWEEAMAKAQETGHLVMDVRRYGK 90 (90)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECCTTCHHHHHHHHHHHHHHTEEEEEEEEEC-
T ss_pred EECCCChHHHcCCCCCCEEEEECCEEccCCCHHHHHHHHHhcCCCCEEEEEEEeCCC
Confidence 456788999999999999999999999 8999999999876679999999999874
No 141
>2vsp_A PDZ domain-containing protein 1; membrane, cytoplasm, phosphoprotein, transport protein, CAsp; 2.60A {Homo sapiens} PDB: 2eej_A
Probab=98.79 E-value=8.7e-09 Score=80.27 Aligned_cols=55 Identities=18% Similarity=0.180 Sum_probs=46.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++.+||++||+|++|||++|. +..++.+++... |++++|+|.|+++..
T Consensus 33 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~v~l~v~r~~~~~ 89 (91)
T 2vsp_A 33 EVQKGGPADLAGLEDEDVIIEVNGVNVLDEPYEKVVDRIQSS--GKNVTLLVCGKKAQD 89 (91)
T ss_dssp CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHTTS--CSEEEEEEEC-----
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCEEEEEEEeCCccc
Confidence 5678899999999999999999999999 999999999874 999999999988764
No 142
>3hrz_D Complement factor B; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Homo sapiens} PDB: 2xwj_I* 3hs0_D* 2ok5_A* 2xwb_F*
Probab=98.78 E-value=8.8e-09 Score=109.48 Aligned_cols=85 Identities=21% Similarity=0.279 Sum_probs=55.8
Q ss_pred CeEEEEEEEcCCCEEEecccccCC---CCeEEEEecC-CCeEeeEEEEECC----------------CCCeEEEEEcCCC
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRG---ASDIRVTFAD-QSAYDAKIVGFDQ----------------DKDVAVLRIDAPK 210 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~---~~~i~V~~~d-g~~~~a~vv~~d~----------------~~DlAlLkv~~~~ 210 (385)
...|.|.+|+++ ||||+|||+.+ ...+.|.+.. .+.+..+-+..++ .+|||||+++.+.
T Consensus 483 ~~~CgGsLIs~~-~VLTAAHC~~~~~~~~~~~V~~G~~~~~~~v~~i~~Hp~y~~~~~~~~~~~~~~~nDIALlkL~~pv 561 (741)
T 3hrz_D 483 HESCMGAVVSEY-FVLTAAHCFTVDDKEHSIKVSVGGEKRDLEIEVVLFHPNYNINGKKEAGIPEFYDYDVALIKLKNKL 561 (741)
T ss_dssp ---EEEEECSSS-EEEECGGGCC-----CCEEEEETTCSCCEEEEEEEECTTCCTTTTGGGTCSCCCTTCCEEEEESSCC
T ss_pred CCEEEEEEecCC-EEEEchhhccccCCcceEEEEeCCCceEEEEEEEEECCCCCcccccccccCCccCCcEEEEEECCcC
Confidence 457999999987 99999999964 4567888863 3455665555443 3599999998764
Q ss_pred ---CCCcceecCCC------CCCCCCCEEEEEeCC
Q 016647 211 ---DKLRPIPIGVS------ADLLVGQKVYAIGNP 236 (385)
Q Consensus 211 ---~~~~~l~l~~~------~~~~~G~~V~~iG~p 236 (385)
..+.|+.|... ..+..|..+.+.||.
T Consensus 562 ~~s~~v~picLp~~~~~~~~~~~~~~~~~~~~gwg 596 (741)
T 3hrz_D 562 KYGQTIRPICLPCTEGTTRALRLPPTTTCQQQKEE 596 (741)
T ss_dssp CCCSSCCCCBCTTBHHHHHHTTCCTTCCHHHHHHH
T ss_pred cCCCCccccccCCcccccchhccCCCCcccccccc
Confidence 34567777522 124556666666654
No 143
>2pkt_A PDZ and LIM domain protein 1; PDZ domain, structural genomics, structural genomics consort unknown function; HET: PG4; 1.50A {Homo sapiens} PDB: 2v1w_A*
Probab=98.78 E-value=4e-09 Score=82.18 Aligned_cols=55 Identities=22% Similarity=0.426 Sum_probs=49.6
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~--~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++.+||++||+|++|||++|.++. ++.+++.. +|+++.|+|.|+|+.+
T Consensus 33 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~g~~~ 89 (91)
T 2pkt_A 33 RVTPGSKAALANLCIGDVITAIDGENTSNMTHLEAQNRIKG--CTDNLTLTVARSEHES 89 (91)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEEEEEECCCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccc
Confidence 5678899999999999999999999999988 88888876 8999999999998754
No 144
>1yph_C Chymotrypsin A, chain B; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1afq_B* 1ca0_B 1cbw_B 1cho_F 1gct_B 1ab9_B* 1ggd_B* 1gha_F 1ghb_F* 1gmc_F 1gmd_F 1gmh_F 1hja_B 1mtn_B 1n8o_B 1vgc_B* 1gg6_B 2cha_B* 2gch_F 2gct_B ...
Probab=98.76 E-value=8.9e-08 Score=79.61 Aligned_cols=85 Identities=14% Similarity=0.157 Sum_probs=60.6
Q ss_pred CeEEEEEEEcCCCEEEecccccCCCCeEEEEecC---------CCeEeeEEEEECC-------CCCeEEEEEcCCC---C
Q 016647 151 QGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFAD---------QSAYDAKIVGFDQ-------DKDVAVLRIDAPK---D 211 (385)
Q Consensus 151 ~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~d---------g~~~~a~vv~~d~-------~~DlAlLkv~~~~---~ 211 (385)
...|.|.+|+++ ||||+|||+.+ ..+.|.+.. ++.+..+-+..++ .+||||||++.+. +
T Consensus 24 ~~~CgGsLIs~~-~VLTAAHC~~~-~~~~v~~G~~~~~~~~~~~~~~~v~~i~~hp~y~~~~~~~DIALl~L~~~~~~~~ 101 (131)
T 1yph_C 24 FHFCGGSLINEN-WVVTAAHCGVT-TSDVVVAGEFDQGSSSEKIQKLKIAKVFKNSKYNSLTINNDITLLKLSTAASFSQ 101 (131)
T ss_dssp CEEEEEEEEETT-EEEECGGGCCC-TTSEEEESCSBTTCSSSCCEEEEEEEEEECTTCCTTTCCSCCEEEEESSCCCCBT
T ss_pred CEEEEEEEeeCC-EEEECHHHCCC-CCeEEEEeEccCCCCCCceEEEEEEEEEeCCCCCCCCCCCCEEEEEECCcccCCC
Confidence 347999999987 99999999976 445666532 1234444444443 4699999998764 3
Q ss_pred CCcceecCCCC-CCCCCCEEEEEeCCC
Q 016647 212 KLRPIPIGVSA-DLLVGQKVYAIGNPF 237 (385)
Q Consensus 212 ~~~~l~l~~~~-~~~~G~~V~~iG~p~ 237 (385)
.+.|+.|.... .+..|+.+++.||..
T Consensus 102 ~v~picLp~~~~~~~~g~~~~v~GWG~ 128 (131)
T 1yph_C 102 TVSAVCLPSASDDFAAGTTCVTTGWGL 128 (131)
T ss_dssp TBCCCBCCCTTCCCCTTCEEEEEESCC
T ss_pred cCcceECCCcccCCCCCCEEEEEcCCc
Confidence 46788886543 356899999999863
No 145
>1qau_A Neuronal nitric oxide synthase (residues 1-130); beta-finger, oxidoreductase; 1.25A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1qav_B
Probab=98.73 E-value=1.3e-08 Score=82.31 Aligned_cols=66 Identities=20% Similarity=0.242 Sum_probs=57.8
Q ss_pred cccccccccccCC-CCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCC
Q 016647 316 GLLSTKRDAYGRL-ILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKP 382 (385)
Q Consensus 316 ~v~~~~~a~~~gl-~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 382 (385)
.+.++++++.+|| ++||+|++|||+++.+ ..++.+++.. .+|+.+.++|.|+|+..+++++....+
T Consensus 32 ~v~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~~~~~~~~~~ 100 (112)
T 1qau_A 32 DLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG-IASETHVVLILRGPEGFTTHLETTFTG 100 (112)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTSCHHHHHHHHHH-SCSSSEEEEEEECCTTSEEEEEEEECT
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCcEEEEEEeCCcccceEeeeeccC
Confidence 4668899999998 9999999999999999 9999999987 478999999999998888887765544
No 146
>2hga_A Conserved protein MTH1368; GFT structural genomics, PSI, protein structure initiative; NMR {Methanothermobacterthermautotrophicus} SCOP: b.36.1.6
Probab=98.72 E-value=2.7e-08 Score=82.47 Aligned_cols=61 Identities=20% Similarity=0.227 Sum_probs=52.7
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPK 381 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 381 (385)
.+.++++++.+ |++||+|++|||++|.++.++.+++...++|+.++++| |+|+ +++++.+.
T Consensus 31 ~V~~~spA~~a-L~~GD~Il~InG~~v~~~~dl~~~l~~~~~g~~v~l~V-R~g~---~~v~l~~~ 91 (125)
T 2hga_A 31 SVVPGSPASKV-LTPGLVIESINGMPTSNLTTYSAALKTISVGEVINITT-DQGT---FHLKTGRN 91 (125)
T ss_dssp EECSSSGGGGT-SCTTCEEEEETTEECSSHHHHHHHHTTCCTTCEEEEEE-TTEE---EEEECCBC
T ss_pred EECCCChHHHh-cCCCCEEEEECCEEcCCHHHHHHHHHhcCCCCEEEEEE-ECCE---EEEEEecc
Confidence 34577889999 99999999999999999999999998777899999999 9987 55665543
No 147
>3bpu_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; structural genomi consortium, SGC, ATP-binding, cell junction; 1.60A {Homo sapiens}
Probab=98.69 E-value=3e-08 Score=76.64 Aligned_cols=51 Identities=27% Similarity=0.317 Sum_probs=44.4
Q ss_pred ccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 319 STKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 319 ~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
++++++ +||++||+|++|||++|.++ .++.+++...++|+++.|+|.|+|+
T Consensus 35 ~~spA~-aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 87 (88)
T 3bpu_A 35 VDSPRS-RGLKEGDLIVEVNKKNVQALTHNQVVDMLVESPKGSEVTLLVQRQTR 87 (88)
T ss_dssp CC--CC-TTCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEEECC
T ss_pred cCChhH-hCCCCCCEEEEECCEEcCCCCHHHHHHHHHhCCCCCEEEEEEEeCCc
Confidence 677888 99999999999999999987 8898888876789999999999875
No 148
>2pa1_A PDZ and LIM domain protein 2; PDZ domain, structural genomics, structural genomics consort metal binding protein; 1.70A {Homo sapiens} PDB: 3pdv_A
Probab=98.68 E-value=3.1e-08 Score=76.37 Aligned_cols=53 Identities=17% Similarity=0.228 Sum_probs=47.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++.... +++.|+|+|+|+
T Consensus 32 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~l~v~R~~~ 86 (87)
T 2pa1_A 32 KVAERGKAKDADLRPGDIIVAINGESAEGMLHAEAQSKIRQSP--SPLRLQLDRITS 86 (87)
T ss_dssp EECSSSHHHHTTCCTTCEEEEETTEESTTCCHHHHHHHHHTCC--SSEEEEEEECCC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCC--CeEEEEEEecCC
Confidence 56788999999999999999999999999 799999998753 889999999875
No 149
>2dls_A PDZ-rhogef, RHO guanine nucleotide exchange factor 11; PDZ domain, arhgef11, KIAA0380, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2omj_A 2os6_A
Probab=98.67 E-value=2.2e-08 Score=78.34 Aligned_cols=54 Identities=26% Similarity=0.314 Sum_probs=45.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++||++||+|++|||++|.++.++ +++...++|++++|+|+|++.
T Consensus 35 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~-~~~~~~~~g~~v~l~v~R~~~ 88 (93)
T 2dls_A 35 SVRPGGAAMKAGVKEGDRIIKVNGTMVTNSSHL-EVVKLIKSGAYVALTLLGSSS 88 (93)
T ss_dssp EECSSSTTTTTTCCSSCEEEEETTEECSSSCHH-HHHHHHTSSSEEEEEEECCCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHH-HHHHhhcCCCEEEEEEEECCC
Confidence 456789999999999999999999999997654 344445579999999999864
No 150
>1wif_A RSGI RUH-020, riken cDNA 4930408O21; PDZ domain, structural genomics, mouse cDNA, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.67 E-value=2.9e-08 Score=82.39 Aligned_cols=53 Identities=23% Similarity=0.384 Sum_probs=49.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++|+++| |++||+|++|||++|. ++.++.++|...++|++|+|+|.|+
T Consensus 55 ~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~s~~d~~~~l~~~~~G~~v~l~V~R~ 110 (126)
T 1wif_A 55 HLINKGAAASDGILQPGDVLISVGHANVLGYTLREFLKLLQNITIGTVLQIKAYRG 110 (126)
T ss_dssp CCCTTSSGGGCSSSCTTCBEEEESSSCCTTCCHHHHHHHHTSCCSSCEEEEEEESS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEEC
Confidence 677899999999 9999999999999995 8999999999888999999999998
No 151
>3cyy_A Tight junction protein ZO-1; protein-ligand complex, cell junction, membrane, phosphoprot domain, tight junction, transmembrane; 2.40A {Homo sapiens}
Probab=98.62 E-value=4.2e-08 Score=76.27 Aligned_cols=59 Identities=15% Similarity=0.256 Sum_probs=44.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPV 376 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 376 (385)
.+.++++++.+| |++||+|++|||+++. ++.++.+++.. .++.+.++|.|+|+.+++++
T Consensus 29 ~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~g~~~~~~v 90 (92)
T 3cyy_A 29 EISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIER--SKGKLKMVVQRDERATLLNV 90 (92)
T ss_dssp EECTTCHHHHSCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEEC---------
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEEeCCceeeeeC
Confidence 456788899999 9999999999999999 99999999876 34699999999998876655
No 152
>3mmg_A Nuclear inclusion protein A; 3C-type protease, TEV, TVMV, viral protein, hydrolase; 1.70A {Tobacco vein mottling virus} SCOP: b.47.1.0
Probab=98.61 E-value=2e-06 Score=77.96 Aligned_cols=164 Identities=13% Similarity=0.256 Sum_probs=107.2
Q ss_pred hCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCC-CeEEEEecCCCeEeeE-----EEEECCC
Q 016647 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK-----IVGFDQD 198 (385)
Q Consensus 125 ~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~-~~i~V~~~dg~~~~a~-----vv~~d~~ 198 (385)
+...|+.++...... ...--|+..+ .||||++|.+... ..++|+...|.. ... .+..-+.
T Consensus 14 ia~~iC~l~n~sdg~-----------~~~l~gigyG--~~iItn~HLf~rnng~L~I~s~hG~f-~v~nt~~lki~~i~g 79 (241)
T 3mmg_A 14 ISACVCLLENSSDGH-----------SERLFGIGFG--PYIIANQHLFRRNNGELTIKTMHGEF-AVANSTQLQMKPVEG 79 (241)
T ss_dssp HHTTEEEEEEEETTE-----------EEEEEEEEET--TEEEECGGGGSSTTCEEEEEETTEEE-EEEEGGGSCEEECTB
T ss_pred hhheEEEEEEEeCCC-----------EEEEEEEeEC--CEEEEChhhcccCCCeEEEEECCceE-EccCCCceeeEEeCC
Confidence 345688887643221 1234577775 3999999999865 468898887743 221 2455678
Q ss_pred CCeEEEEEcCCCCCCcceecCC-CCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCC
Q 016647 199 KDVAVLRIDAPKDKLRPIPIGV-SADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 277 (385)
Q Consensus 199 ~DlAlLkv~~~~~~~~~l~l~~-~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G 277 (385)
.||.++|+.. ++||.+-.. -..++.||+|+++|..+.... ....|+........ ....+..+-.....|
T Consensus 80 ~DiiiIrmPk---DfpPf~~kl~FR~P~~~E~V~lVg~~fq~k~--~~s~vSesS~i~p~-----~~~~fWkHwIsT~~G 149 (241)
T 3mmg_A 80 RDIIVIKMAK---DFPPFPQKLKFRQPTIKDRVCMVSTNFQQKS--VSSLVSESSHIVHK-----EDTSFWQHWITTKDG 149 (241)
T ss_dssp SSCEEEECCT---TSCCCCSCCCBCCCCTTCCEEEEEEEECSSC--EEEEEEEEECCEEC-----TTSSEEEECBCCCTT
T ss_pred ccEEEEeCCC---CCCCcchhcccCCCCCCCeEEEEEeecccCC--ccEEECCcceeEEc-----CCCCEEEEEcCCCCC
Confidence 9999999954 455554321 245889999999997544322 22233322211111 113466777778899
Q ss_pred CCCceeeC-CCccEEEEeecccCCCCCCCCceeeeccccc
Q 016647 278 NSGGPLLD-SSGSLIGINTAIYSPSGASSGVGFSIPVDTG 316 (385)
Q Consensus 278 ~SGGPlvn-~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~~ 316 (385)
+-|+|+++ .||.+|||++..... ...+|..|+...
T Consensus 150 ~CGlPlVs~~Dg~IVGiHsl~~~~----~~~N~F~~f~~~ 185 (241)
T 3mmg_A 150 QAGSPLVSIIDGNILGIHSLTHTT----NGSNYFVEFPEK 185 (241)
T ss_dssp CTTCEEEETTTCCEEEEEEEEETT----TCCEEEEECCTT
T ss_pred cCCCeEEEcCCCcEEEEEecccCC----CCcEEEEcCCHH
Confidence 99999998 699999999976532 346788887763
No 153
>2v90_A PDZ domain-containing protein 3; membrane, protein-binding; 2.00A {Homo sapiens}
Probab=98.61 E-value=1.3e-08 Score=80.00 Aligned_cols=56 Identities=14% Similarity=0.184 Sum_probs=49.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++.. .|+.+.|+|.|+|+..+
T Consensus 36 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~~~ 93 (96)
T 2v90_A 36 EVDPGLPAKKAGMQAGDRLVAVAGESVEGLGHEETVSRIQG--QGSCVSLTVVDPEADRE 93 (96)
T ss_dssp EECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEECCCTTSC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEECCCCccc
Confidence 45678999999999999999999999999 7899998876 39999999999987543
No 154
>1b8q_A Protein (neuronal nitric oxide synthase); PDZ domain, NNOS, nitric oxide synthase, oxidoreductase; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.61 E-value=4.1e-08 Score=81.34 Aligned_cols=65 Identities=20% Similarity=0.254 Sum_probs=57.3
Q ss_pred cccccccccccCC-CCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecC
Q 016647 316 GLLSTKRDAYGRL-ILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPK 381 (385)
Q Consensus 316 ~v~~~~~a~~~gl-~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 381 (385)
.+.++++++.+|| ++||+|++|||++|.+ ..++.+++.. .+|+.+.|+|.|+|+.++++++....
T Consensus 39 ~V~~~spA~~aGll~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~~~~~~~~~ 106 (127)
T 1b8q_A 39 DLIRGGAAEQSGLIQAGDIILAVNDRPLVDLSYDSALEVLRG-IASETHVVLILRGPEGFTTHLETTFT 106 (127)
T ss_dssp CCSSSSSHHHHSSCCTTTCCCEETTEECSSSCHHHHHHHHHS-CCSSCEEEEEECCCCSEEECCCCCCC
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEEeCCceEEEEEEEEec
Confidence 5678899999998 9999999999999999 9999999987 57999999999999988887776433
No 155
>2uzc_A Human pdlim5, PDZ and LIM domain 5; metal-binding, enigma homolog, phosphorylation, signaling PR LIM domain, PDZ domain; 1.5A {Homo sapiens}
Probab=98.61 E-value=6.2e-08 Score=74.74 Aligned_cols=53 Identities=13% Similarity=0.230 Sum_probs=46.6
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+||++||+|++|||++|.++ .++.+++.. .|+++.++|.|+|+
T Consensus 33 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~ 87 (88)
T 2uzc_A 33 SLKDGGKAAQANVRIGDVVLSIDGINAQGMTHLEAQNKIKG--CTGSLNMTLQRESD 87 (88)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEECCCC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCC
Confidence 567889999999999999999999999998 788877765 38999999999874
No 156
>1wh1_A KIAA1095 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.60 E-value=9.6e-09 Score=84.95 Aligned_cols=62 Identities=16% Similarity=0.127 Sum_probs=54.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
.+.++++++++| |++||+|++|||++|.++.++.++|.. .+|+++.|+|.|+|+.++.....
T Consensus 54 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~l~~-~~g~~v~l~v~R~g~~~~~~~~~ 116 (124)
T 1wh1_A 54 EIDPNSIAAKDGRIREGDRIIQINGIEVQNREEAVALLTS-EENKNFSLLIARPELQLDEGWMD 116 (124)
T ss_dssp EECSSSHHHHTCCCCTTCEEEEESSCBCCSHHHHHHHHTC-SSCCSCCEEEEECSSCCCCCCCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCHHHHHHHHHh-CCCCEEEEEEEECCEEeecccCC
Confidence 456789999999 999999999999999999999999987 57999999999999876554433
No 157
>2jxo_A Ezrin-radixin-moesin-binding phosphoprotein 50; nherf-1, PDZ domain, PDZ2, acetylation, cell projection, membrane, polymorphism; NMR {Homo sapiens}
Probab=98.60 E-value=1.5e-08 Score=79.92 Aligned_cols=55 Identities=16% Similarity=0.133 Sum_probs=49.4
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++... +|+.+.++|.|+|+.
T Consensus 39 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v~R~g~~ 95 (98)
T 2jxo_A 39 SVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRETDE 95 (98)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTT-TTEEEEEECCHHHHH
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCcEEEEEEECCchh
Confidence 45688999999999999999999999999 99999999876 788899999998753
No 158
>1v5q_A GRIP1 homolog, glutamate receptor interacting protein 1A-L homolog; PDZ domain, cellular signaling, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.59 E-value=4.9e-08 Score=80.37 Aligned_cols=56 Identities=14% Similarity=0.200 Sum_probs=51.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|.+ ..++.+++...++|++++|+|.|+++.
T Consensus 51 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 109 (122)
T 1v5q_A 51 YIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVAE 109 (122)
T ss_dssp EECTTSHHHHSCCCCTTCCEEEETTEESSSSCHHHHHHHHHHHTTTTCEEEEEEEECCC
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEECCcc
Confidence 566789999999 99999999999999988 999999998877799999999998864
No 159
>2he4_A Na(+)/H(+) exchange regulatory cofactor NHE-RF2; phosphorylation, structural genomics, structural genomics consortium, SGC, unknown function; 1.45A {Homo sapiens} PDB: 2ozf_A
Probab=98.58 E-value=4.6e-08 Score=75.90 Aligned_cols=53 Identities=19% Similarity=0.169 Sum_probs=47.6
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+||++||+|++|||++|.++ .++.+++... |+++.|+|.|.+.
T Consensus 34 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 88 (90)
T 2he4_A 34 SVDPGSPAARSGLRAQDRLIEVNGQNVEGLRHAEVVASIKAR--EDEARLLVVGPST 88 (90)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTSCHHHHHHHHTTS--SSEEEEEEECCCC
T ss_pred EECCCChHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCcEEEEEEccCC
Confidence 456789999999999999999999999998 8999998764 8999999999865
No 160
>2i04_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; PDZ, E6 binding, tumor suppressor, peptide binding protein; 2.15A {Mus musculus}
Probab=98.58 E-value=8.2e-08 Score=73.54 Aligned_cols=52 Identities=27% Similarity=0.374 Sum_probs=46.3
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLR 367 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R 367 (385)
.+.++++++.+| |++||+|++|||++|. +..++.+++...++|++++++|.|
T Consensus 31 ~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R 85 (85)
T 2i04_A 31 SLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCR 85 (85)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCTTCEEEEEEEC
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEC
Confidence 456788999999 9999999999999999 568999999887779999999876
No 161
>2w4f_A Protein LAP4; structural protein, phosphoprotein, UBL conjugation, leucine-rich repeat, alternative splicing, cytoplasm, circletail, coiled coil; 1.30A {Homo sapiens}
Probab=98.57 E-value=2.7e-08 Score=78.20 Aligned_cols=56 Identities=18% Similarity=0.193 Sum_probs=47.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.++.++.......++|++++|+|.|+|+.
T Consensus 40 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~ 95 (97)
T 2w4f_A 40 RVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRERET 95 (97)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEECCSSC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhCCCCeEEEEEEeCCcc
Confidence 45678899999999999999999999999887665544445899999999999864
No 162
>1v5l_A PDZ and LIM domain 3; actinin alpha 2 associated LIM protein; PDZ domain, cytoskeleton, actin binding, structural genomics; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.57 E-value=4.6e-08 Score=78.01 Aligned_cols=58 Identities=16% Similarity=0.262 Sum_probs=51.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEKIP 375 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~ 375 (385)
.+.++++++++||++||+|++|||++|.+ ..++.+++... |+.+.|+|+|+|+.+...
T Consensus 35 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~--g~~v~l~v~R~g~~~~~~ 94 (103)
T 1v5l_A 35 RITPGSKAAAANLCPGDVILAIDGFGTESMTHADAQDRIKAA--SYQLCLKIDRAETRLWSP 94 (103)
T ss_dssp CBCTTSTTGGGTCCTTCBEEEETTEECSSCCHHHHHHHHTTC--CSEEECEECCCTTTTSCS
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEECCeEccCC
Confidence 56788999999999999999999999999 99999999874 999999999999765433
No 163
>4fgm_A Aminopeptidase N family protein; structural genomics, PSI-biology, northeast structural genom consortium, NESG, peptidase_M61, PDZ; 2.39A {Idiomarina loihiensis L2TR}
Probab=98.56 E-value=7.8e-08 Score=99.85 Aligned_cols=67 Identities=18% Similarity=0.296 Sum_probs=61.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKPD 383 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~~ 383 (385)
.|..++|++++||++||+|++|||++| +..++.+++...++|++|+|+|.|+|+.+++++++.+.+.
T Consensus 502 ~V~~~spA~~AGL~~GD~I~aInG~~v-~~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~l~~~~~ 568 (597)
T 4fgm_A 502 NVYHDESAYHAGLSAGDKIIAIDHLQA-TEQSVKRILERYIPGDTVTIHAFRRDELMTLELTWQEPAK 568 (597)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEEC-CTTTHHHHHTTCCTTCEEEEEEEETTEEEEEEEECCCCCC
T ss_pred EeCCCChHHHCCCCCCCEEEEECCEEC-CHHHHHHHHHhcCCCCEEEEEEEECCEEEEEEEEecCCCC
Confidence 567789999999999999999999999 5889999999888999999999999999999999987654
No 164
>2jil_A GRIP1 protein, glutamate receptor interacting protein-1; endoplasmic reticulum, postsynaptic membrane, membrane, MEMB protein; 1.5A {Homo sapiens}
Probab=98.55 E-value=3.6e-08 Score=77.53 Aligned_cols=55 Identities=18% Similarity=0.216 Sum_probs=49.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++.. +|+.+.|+|.|+++.+
T Consensus 38 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~~ 95 (97)
T 2jil_A 38 SVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEAALLIEYDVSET 95 (97)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH--SCSEEEEEEEEECCCC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCcC
Confidence 466889999999 99999999999999999 9999999987 7999999999988653
No 165
>1ueq_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.55 E-value=3e-07 Score=75.70 Aligned_cols=55 Identities=20% Similarity=0.332 Sum_probs=49.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|. +..++.+++...+.|+.|+|+|.|++.
T Consensus 50 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 107 (123)
T 1ueq_A 50 SVIPDGPAAQDGKMETGDVIVYINEVCVLGHTHADVVKLFQSVPIGQSVNLVLCRGYP 107 (123)
T ss_dssp EECTTSHHHHTSCCCTTCEEEEETTEECTTSCHHHHHHHHHTSCTTCEEEEEEEESCC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 456788999999 9999999999999998 678999999987779999999999874
No 166
>1uit_A Human discs large 5 protein; PDZ domain, HDLG5, maguk family, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=3.9e-08 Score=80.28 Aligned_cols=59 Identities=12% Similarity=0.095 Sum_probs=51.2
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKI 374 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 374 (385)
.+.++++++.+||++||+|++|||++|.++.++...+...++|+++.|+|.|+++.++.
T Consensus 48 ~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~ 106 (117)
T 1uit_A 48 KVTVGSIAHQAGLEYGDQLLEFNGINLRSATEQQARLIIGQQCDTITILAQYNPHVHQL 106 (117)
T ss_dssp EECTTSHHHHHTCCTTCEECEETTEETTTCCHHHHHHHTTSCCSEEEEEECCCSCCCCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCchhhh
Confidence 45678899999999999999999999999988877766567899999999999886543
No 167
>2f5y_A Regulator of G-protein signalling 3 isoform 1; PDZ domain, RGS-3, human, structural genomics, structural GE consortium, SGC, signaling protein; 2.39A {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=1.3e-07 Score=73.45 Aligned_cols=55 Identities=18% Similarity=0.122 Sum_probs=45.4
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++.. .|+.+.|+|.|++...
T Consensus 30 ~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~ 86 (91)
T 2f5y_A 30 AVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVWRMVPQV 86 (91)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHT--CSSEEEEEEEECC---
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCCC
Confidence 55678899999999999999999999995 5788887765 5778999999988754
No 168
>1x5q_A LAP4 protein; PDZ domain, scribble homolog protein, hscrib, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=3e-08 Score=79.97 Aligned_cols=57 Identities=18% Similarity=0.176 Sum_probs=46.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++++||++||+|++|||++|.+..++.......++|++++|+|+|+|+.+
T Consensus 52 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~g~~~ 108 (110)
T 1x5q_A 52 RVSEEGPAARAGVRVGDKLLEVNGVALQGAEHHEAVEALRGAGTAVQMRVWRESGPS 108 (110)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHSCCSEEEEEEEECSSCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHhhCCCCeEEEEEEECCccC
Confidence 456788999999999999999999999996555443333348999999999998753
No 169
>1ujv_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics, KIAA0705 protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=1.6e-07 Score=73.93 Aligned_cols=49 Identities=29% Similarity=0.513 Sum_probs=44.1
Q ss_pred ccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 323 DAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 323 a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
++.+||++||+|++|||++|.++ .++.+++...++|+++.|+|.|+++.
T Consensus 43 a~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~~ 93 (96)
T 1ujv_A 43 QGCPGLCEGDLIVEINQQNVQNLSHTEVVDILKDCPIGSETSLIIHRGSGP 93 (96)
T ss_dssp GGSTTCCSSCEEEEETTEECSSCCHHHHHHHHHHSCTTSEEEEEEECCSSC
T ss_pred cccCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCCC
Confidence 67899999999999999999875 89999998876799999999998753
No 170
>1uf1_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.54 E-value=1.3e-08 Score=84.55 Aligned_cols=65 Identities=18% Similarity=0.170 Sum_probs=53.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPK 381 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~ 381 (385)
.+.++++++.+||++||+|++|||++|.++.+ .+++...+.++.+.|+|.|+|+..++++++.+.
T Consensus 52 ~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~-~~~~~~~~~~~~v~l~v~R~g~~~~~~v~~~~~ 116 (128)
T 1uf1_A 52 GVDPGSEAEGSGLKVGDQILEVNGRSFLNILH-DEAVRLLKSSRHLILTVKDVGRLPHARTTVDET 116 (128)
T ss_dssp EECTTCHHHHHTCCTTCEEEEETTEECSSCCH-HHHHHHHTTCSEEEEEEECCSCCSSCSCCCCSS
T ss_pred EECCCCHHHHCCCCCCCEEEEECCEECCCCCH-HHHHHHHhcCCeEEEEEEECCcccccccccccc
Confidence 45678999999999999999999999999765 445544456789999999999988888777654
No 171
>3khf_A Microtubule-associated serine/threonine-protein kinase 3; MAST3, microtubule associated serine/threonine kinase 3, PDZ domain, structural genomics; 1.20A {Homo sapiens} PDB: 2w7r_A 2kqf_A 2kyl_A 3ps4_A
Probab=98.53 E-value=8.5e-08 Score=75.73 Aligned_cols=54 Identities=22% Similarity=0.296 Sum_probs=48.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+.+||++||+|++|||++|. +..++..++. ++|+.+.|++.|+|+.
T Consensus 40 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~--~~g~~v~l~v~r~~~~ 95 (99)
T 3khf_A 40 SVEDGSPAQEAGLRAGDLITHINGESVLGLVHMDVVELLL--KSGNKISLRTTALENT 95 (99)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEECSCSS
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHh--cCCCEEEEEEEECCCc
Confidence 5678899999999999999999999999 7889988887 4799999999998753
No 172
>1vb7_A PDZ and LIM domain 2; PDZ domain PDZ-LIM protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=6.2e-08 Score=75.85 Aligned_cols=54 Identities=19% Similarity=0.263 Sum_probs=48.1
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++||++||+|++|||++|.++ .++.+++.... ++++|+|+|+|+.
T Consensus 36 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~~--~~v~l~v~R~g~~ 91 (94)
T 1vb7_A 36 KVTERGKAEAADLRPGDIIVAINGQSAENMLHAEAQSKIRQSA--SPLRLQLDRSSGP 91 (94)
T ss_dssp CBCTTSSHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTCC--SSEEEEEECCCCC
T ss_pred EECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCC--CcEEEEEEECCcC
Confidence 567889999999999999999999999997 89999888753 8899999999864
No 173
>1wf7_A Enigma homologue protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.53 E-value=2.9e-08 Score=79.15 Aligned_cols=62 Identities=11% Similarity=0.167 Sum_probs=52.1
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEee
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLE 379 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 379 (385)
.+.++++++++||++||+|++|||++|.++ .++..++.. .|+.+.|+|+|+++..++++++.
T Consensus 35 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~~~~~~v~p~ 98 (103)
T 1wf7_A 35 SLKDGGKASQAHVRIGDVVLSIDGISAQGMTHLEAQNKIKA--CTGSLNMTLQRASAAAKSEPVSS 98 (103)
T ss_dssp CCCTTCHHHHTTCCTTCBEEEETTEECSSCCHHHHHHHHHH--CSSEEEEEECCCSCCCCCCCCCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCcCCCCCCCC
Confidence 567889999999999999999999999987 566666654 48899999999998877776553
No 174
>2q3g_A PDZ and LIM domain protein 7; structural genomics, structural genomics consortium, SGC; 1.11A {Homo sapiens}
Probab=98.52 E-value=1.5e-07 Score=72.69 Aligned_cols=54 Identities=15% Similarity=0.268 Sum_probs=45.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++||++||+|++|||++|.+ ..++.+++.. .|+.+.++|.|+++.
T Consensus 33 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 88 (89)
T 2q3g_A 33 RLTPGGKAAQAGVAVGDWVLSIDGENAGSLTHIEAQNKIRA--CGERLSLGLSRAITS 88 (89)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHT--CTTEEEEEEEEECCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEeCCCC
Confidence 55678899999999999999999999994 5777777765 489999999998753
No 175
>3tsv_A Tight junction protein ZO-1; PDZ, scaffolding, JAM, cell adhesion; 1.99A {Homo sapiens} PDB: 3shu_A
Probab=98.52 E-value=6.4e-08 Score=80.06 Aligned_cols=56 Identities=25% Similarity=0.240 Sum_probs=50.7
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+.+||++||+|++|||++|.++ .++.+++...++|++++|+|.|+++.
T Consensus 57 ~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 114 (124)
T 3tsv_A 57 GVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKDV 114 (124)
T ss_dssp EECTTCHHHHTTCCTTEEEEEETTEECSSCCHHHHHHHHHHSCTTCEEEEEEEECHHH
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCch
Confidence 466889999999999999999999999998 89999888778999999999998764
No 176
>1uep_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.51 E-value=7.7e-08 Score=76.69 Aligned_cols=55 Identities=16% Similarity=0.189 Sum_probs=48.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|.+ ..++.+++...++|+.|+|+|.|+++
T Consensus 40 ~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 97 (103)
T 1uep_A 40 AVIAMGSADRDGRLHPGDELVYVDGIPVAGKTHRYVIDLMHHAARNGQVNLTVRRKVL 97 (103)
T ss_dssp EECTTSTTGGGTCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEEECC
T ss_pred EeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCcEEEEEEeCCC
Confidence 566889999999 99999999999999965 78898888875558999999999865
No 177
>1rgw_A ZAsp protein; PDZ, cypher, oracle, muscle, Z-DISK, sarcomere, structural protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 1wjl_A
Probab=98.51 E-value=1.1e-07 Score=72.80 Aligned_cols=53 Identities=9% Similarity=0.236 Sum_probs=44.7
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+||++||+|++|||+++.++ .++...+.. .++++.++|.|+++
T Consensus 31 ~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 85 (85)
T 1rgw_A 31 RITPGSKAAQSQLSQGDLVVAIDGVNTDTMTHLEAQNKIKS--ASYNLSLTLQKSKR 85 (85)
T ss_dssp EECTTSHHHHSSCCCCSBEEEETTEECTTCCHHHHHHHHTT--CSSCEEEEEESCCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHc--CCCeEEEEEEeCCC
Confidence 566888999999999999999999999987 677766653 56779999999874
No 178
>1uew_A Membrane associated guanylate kinase inverted-2 (MAGI-2); atrophin-1 interacting protein 1, PDZ domain, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.50 E-value=1.2e-07 Score=77.07 Aligned_cols=54 Identities=20% Similarity=0.439 Sum_probs=49.0
Q ss_pred cccccccccc-cCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAY-GRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~-~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.+++++++ +||++||+|++|||++|.+ ..++.+++.. .|+.+.|+|.|+++.
T Consensus 49 ~V~~~spA~~~agL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 105 (114)
T 1uew_A 49 RIIDGSPADRCAKLKVGDRILAVNGQSIINMPHADIVKLIKD--AGLSVTLRIIPQEEL 105 (114)
T ss_dssp EECTTCTTGGGSSCCTTCBEEEETTBCTTTSCHHHHHHHHHH--TTTEEEEEECCCSCC
T ss_pred EECCCChHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 5678899999 9999999999999999999 5899999986 799999999998865
No 179
>2yub_A LIMK-2, LIM domain kinase 2; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.50 E-value=2.4e-08 Score=81.97 Aligned_cols=56 Identities=13% Similarity=0.168 Sum_probs=49.6
Q ss_pred cccc--cccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLS--TKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~--~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.+ +++++.+||++||+|++|||++|.++ .++.+++... |+.+.|+|.|+|+..+
T Consensus 50 ~V~~~~~spA~~aGL~~GD~Il~Vng~~v~~~~~~dl~~~l~~~--g~~v~l~v~R~g~~~~ 109 (118)
T 2yub_A 50 EVNRMHISPNNRNAIHPGDRILEINGTPVRTLRVEEVEDAIKQT--SQTLQLLIEHDPVPQR 109 (118)
T ss_dssp ECCTTTSCTTHHHHCCTTCCEEEESSSBTTTSCHHHHHHHHHCC--SSCEEEEEEECSSCCC
T ss_pred EecCCCCChHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHHhC--CCEEEEEEEECCEEEe
Confidence 3445 78899999999999999999999999 9999999875 8999999999998654
No 180
>2kv8_A RGS12, regulator of G-protein signaling 12; PDZ domain, signaling protein; NMR {Homo sapiens}
Probab=98.49 E-value=2.1e-07 Score=70.99 Aligned_cols=52 Identities=17% Similarity=0.281 Sum_probs=44.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++.+||++||+|++|||++|.++ .++.+++.. .++.++|+|.|+.
T Consensus 29 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~ 82 (83)
T 2kv8_A 29 CVMRGSPADFVGLRAGDQILAVNEINVKKASHEDVVKLIGK--CSGVLHMVIAEGV 82 (83)
T ss_dssp BCCTTSTTTTTTCCTTCEEEEETTEECSSCCHHHHHHHHTT--CSSCEEEEEECCC
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCC
Confidence 566788999999999999999999999998 888888754 4678999999863
No 181
>2kpk_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; PDZ domain, ATP-binding, cell junction, cell membrane; NMR {Homo sapiens} PDB: 2kpl_A
Probab=98.49 E-value=3.4e-07 Score=76.09 Aligned_cols=55 Identities=27% Similarity=0.375 Sum_probs=49.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|.+ ..++.+++...++|+.|+|+|.|++.
T Consensus 49 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 106 (129)
T 2kpk_A 49 SLVLDGPAALDGKMETGDVIVSVNDTCVLGHTHAQVVKIFQSIPIGASVDLELCRGYP 106 (129)
T ss_dssp EECTTSHHHHHSSCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTEEEEEEEEECSC
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCC
Confidence 567889999999 99999999999999984 67999999987779999999999863
No 182
>1uez_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.49 E-value=3.8e-08 Score=78.09 Aligned_cols=55 Identities=16% Similarity=0.156 Sum_probs=46.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.++.+ .+++...+.++.+.|+|+|+|+.
T Consensus 41 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~-~~~~~~~~~~~~v~l~v~R~g~~ 95 (101)
T 1uez_A 41 LVEPGSLAEKEGLRVGDQILRVNDKSLARVTH-AEAVKALKGSKKLVLSVYSAGRI 95 (101)
T ss_dssp EECTTSHHHHHTCCSSCCEEEETTEECSSCCH-HHHHHHSSSSSSCCEEECCCCCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCcCH-HHHHHhhcCCCeEEEEEEECCcc
Confidence 45678899999999999999999999999888 44566667788999999998863
No 183
>2jre_A C60-1 PDZ domain peptide; de novo protein; NMR {Synthetic}
Probab=98.48 E-value=1.2e-07 Score=76.18 Aligned_cols=54 Identities=22% Similarity=0.274 Sum_probs=47.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++.. +|+.+.|+|.|+++.
T Consensus 50 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~ 106 (108)
T 2jre_A 50 SLIPGSAAALDGRIEPNDKILRVDDVNVQGMAQSDVVEVLRN--AGNPVRLLLIRRLPL 106 (108)
T ss_dssp EECTTSHHHHHSSCCSSEEEEEETTEECTTSCHHHHHHHHHH--HCSEEEEEEEECCCC
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 456788999999 99999999999999998 6788888876 689999999999864
No 184
>2kom_A Partitioning defective 3 homolog; PAR-3B, PDZ domain, PSI, structural genomics, alternative splicing, cell cycle, cell division, cell junction; NMR {Homo sapiens}
Probab=98.48 E-value=1.6e-07 Score=77.27 Aligned_cols=55 Identities=22% Similarity=0.327 Sum_probs=49.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++...++|++|+|+|.|+|+
T Consensus 64 ~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 121 (121)
T 2kom_A 64 NILPRGAAIQDGRLKAGDRLIEVNGVDLVGKSQEEVVSLLRSTKMEGTVSLLVFRQED 121 (121)
T ss_dssp EECTTSHHHHHTCCCSSSEEEEETTEECTTSCHHHHHHHHHHCCSSCEEEEEEEECCC
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCCCEEEEEEEeCCC
Confidence 456788999999 99999999999999988 58898889877779999999999874
No 185
>1wfg_A Regulating synaptic membrane exocytosis protein 2; PDZ domain, RAB3-interacting molecule, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2css_A 1zub_A
Probab=98.47 E-value=1.9e-07 Score=77.94 Aligned_cols=55 Identities=20% Similarity=0.184 Sum_probs=49.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++|+.+| |++||+|++|||+++.+ ..++.+++...++|+.|+|+|.|++.
T Consensus 71 ~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~g~ 128 (131)
T 1wfg_A 71 KVKKGSLADTVGHLRPGDEVLEWNGRLLQGATFEEVYNIILESKPEPQVELVVSRSGP 128 (131)
T ss_dssp EECTTSHHHHTSCCCTTCEEEEETTEECTTCCHHHHHHHHHHTSSSSEEEEEEEEECS
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEcCCC
Confidence 567889999999 99999999999999975 58999999988789999999999764
No 186
>2h2b_A Tight junction protein ZO-1; PDZ domain, phage derived high affinity ligand, cell adhesio; 1.60A {Homo sapiens} PDB: 2h2c_A 2h3m_A 2rrm_A
Probab=98.46 E-value=1.2e-07 Score=75.93 Aligned_cols=56 Identities=20% Similarity=0.273 Sum_probs=47.7
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++ +||++||+|++|||++|.++.++...+...++|++++|+|.|+|+..
T Consensus 45 ~V~~~spA~-agl~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~ 100 (107)
T 2h2b_A 45 DVLKGGPAE-GQLQENDRVAMVNGVSMDNVEHAFAVQQLRKSGKNAKITIRRKKGGG 100 (107)
T ss_dssp EECTTSTTB-TTBCTTCEEEEETTEECTTCCHHHHHHHHHTCCSEEEEEEEEESCCC
T ss_pred EECCCCchh-hCCCCCCEEEEECCEECCCccHHHHHHHhhCCCCEEEEEEEECCCCC
Confidence 456778888 99999999999999999999887776655578999999999988653
No 187
>2eeh_A PDZ domain-containing protein 7; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.45 E-value=5.6e-08 Score=77.04 Aligned_cols=53 Identities=21% Similarity=0.241 Sum_probs=44.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.+. .++.+.+. .|++++|+|+|+|+.
T Consensus 42 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~~~---~~~~v~l~v~R~g~~ 96 (100)
T 2eeh_A 42 KVEEGSSAERAGLCVGDKITEVNGLSLESTTMGSAVKVLT---SSSRLHMMVRRMGSG 96 (100)
T ss_dssp EECTTSHHHHHTCCSSCEEEEETTEECSSCCHHHHHHHHH---SCSSEEEEEEECSCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHhhc---CCCEEEEEEEECCcC
Confidence 456788999999999999999999999996 55555543 489999999999864
No 188
>2koj_A Partitioning defective 3 homolog; PDZ domain, structural genomics, alternative splicing, cell cycle, cell division, cell junction, coiled coil; NMR {Mus musculus} PDB: 2ogp_A
Probab=98.45 E-value=2.3e-07 Score=74.76 Aligned_cols=56 Identities=21% Similarity=0.336 Sum_probs=49.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++...++|+.+.|+|.|+|+.
T Consensus 45 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~~ 103 (111)
T 2koj_A 45 NILPRGAAIQDGRLKAGDRLIEVNGVDLAGKSQEEVVSLLRSTKMEGTVSLLVFRQEEA 103 (111)
T ss_dssp EECSSSHHHHHCSSCTTCEEEEETTEECTTSCHHHHHHHHHHCCCSSEEEEEEEECCCC
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeCCCC
Confidence 456788999999 99999999999999965 589999998877799999999999864
No 189
>4amh_A Disks large homolog 1; permutation, protein folding, structural protein; 2.30A {Homo sapiens}
Probab=98.44 E-value=1.9e-07 Score=74.86 Aligned_cols=63 Identities=17% Similarity=0.246 Sum_probs=50.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE-EEEEEEEeec
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ-KEKIPVKLEP 380 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~-~~~~~v~~~~ 380 (385)
.+.++++++++| |++||+|++|||++|.+ ..+...++.. .|+++.|+|.|+++ ...+++++.+
T Consensus 38 ~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~~~~v~l~~ 104 (106)
T 4amh_A 38 KIIEGGAAHKDGKLQIGDKLLAVNNVALEEVTHEEAVTALKN--TSDFVYLKVAKPGSGEKIMEIKLIK 104 (106)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHS--CCSEEEEEEECCSSSCSEEEEEEEC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHhC--CCCeEEEEEEeCCCCCeEEEEEEec
Confidence 567888999999 99999999999999965 5667777754 57899999999885 3455565544
No 190
>2d90_A PDZ domain containing protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=98.42 E-value=2.9e-07 Score=73.05 Aligned_cols=54 Identities=20% Similarity=0.302 Sum_probs=46.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.++ .++.+++.. .|+.+.|+|+|+++.
T Consensus 36 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 91 (102)
T 2d90_A 36 DIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK--GGDQTTLLVLDKEAE 91 (102)
T ss_dssp CCCTTSTTTTTTCCTTCEEEEESSCBCTTSCHHHHHHHHHH--STTEEEEEECSTTCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCCc
Confidence 567889999999999999999999999984 788888876 589999999987654
No 191
>2edz_A PDZ domain-containing protein 1; CFTR-associated protein of 70 kDa, Na/PI cotransporter C- terminal-associated protein, NAPI-CAP1; NMR {Mus musculus}
Probab=98.42 E-value=1.6e-08 Score=82.18 Aligned_cols=59 Identities=24% Similarity=0.315 Sum_probs=50.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEKIPV 376 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 376 (385)
.+.++++++++||++||+|++|||++|.+. .++.+++.. .|++++|+|+|+++..++++
T Consensus 44 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~~~~~~ 104 (114)
T 2edz_A 44 VIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVRK--SGNSVTLLVLDGDSYEKAVK 104 (114)
T ss_dssp CCCTTCTTGGGTCCTTCEEEEESSSBCSSSCHHHHHHHHHH--TCSEEEEEEECHHHHHHHHH
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCcceehhh
Confidence 567889999999999999999999999985 888888875 49999999999887655443
No 192
>2eeg_A PDZ and LIM domain protein 4; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.42 E-value=1.9e-07 Score=73.01 Aligned_cols=53 Identities=19% Similarity=0.278 Sum_probs=45.2
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++||++||+|++|||++|.++ .++...+.. +|+++.|+|.|+++
T Consensus 38 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~ 92 (94)
T 2eeg_A 38 RVHAGSKAALAALCPGDLIQAINGESTELMTHLEAQNRIKG--CHDHLTLSVSSGPS 92 (94)
T ss_dssp CCCSSSHHHHTTCCTTCEEEEETTEETTTCCHHHHHHHHHT--CCSCEEEEEECCSS
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCC
Confidence 567888999999999999999999999985 566666654 68899999999875
No 193
>3ngh_A PDZ domain-containing protein 1; adaptor protein, SR-BI, signaling protein; 1.80A {Mus musculus} SCOP: b.36.1.0
Probab=98.42 E-value=1.1e-07 Score=76.00 Aligned_cols=54 Identities=24% Similarity=0.334 Sum_probs=47.6
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~--~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.++. ++.+++. +.|++++|+|.|+++.
T Consensus 32 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~--~~g~~v~l~v~r~~~~ 87 (106)
T 3ngh_A 32 VIEEGSPAEKAGLLDGDRVLRINGVFVDKEEHAQVVELVR--KSGNSVTLLVLDGDSY 87 (106)
T ss_dssp CCCTTSHHHHTTCCTTCEEEEETTEECTTSCHHHHHHHHH--HTTTEEEEEEECHHHH
T ss_pred EeCCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH--hCCCEEEEEEEECCee
Confidence 5678899999999999999999999999876 8888887 3689999999998754
No 194
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.42 E-value=1.1e-07 Score=85.81 Aligned_cols=64 Identities=17% Similarity=0.171 Sum_probs=53.7
Q ss_pred cccccccccccCCCCC-cEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEee
Q 016647 316 GLLSTKRDAYGRLILG-DIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLE 379 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~G-DiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~ 379 (385)
.+.+++||+++||++| |+|++|||++|.++.++...+....+|++++++|+|+++....++++.
T Consensus 22 ~V~~~SpA~~AGL~~G~D~I~~ing~~v~~~~~~~~~~~~~~~g~~v~l~v~R~~~~~~~~v~l~ 86 (209)
T 3rle_A 22 RVQENSPGHRAGLEPFFDFIVSINGSRLNKDNDTLKDLLKANVEKPVKMLIYSSKTLELRETSVT 86 (209)
T ss_dssp EECTTSHHHHTTCCTTTEEEEEETTEECCSSSSHHHHHHHHTTTSCEEEEEEETTTCCEEEEEEC
T ss_pred EECCCCHHHHCCCCcCCeEEEEECCEECcCHHHHHHHHHhcCCCCEEEEEEEecCCceEEEEEEc
Confidence 4678899999999999 999999999999999887777666789999999999865555555553
No 195
>2o2t_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 2.70A {Homo sapiens}
Probab=98.41 E-value=6.6e-08 Score=78.84 Aligned_cols=56 Identities=20% Similarity=0.239 Sum_probs=49.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC---CHHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS---NGSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~---s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++++| |++||+|++|||++|. +..++.+++.. .|+.+.|+|.|+++.++
T Consensus 55 ~V~~~spA~~aG~l~~GD~Il~ing~~v~~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 114 (117)
T 2o2t_A 55 EIQEGSVAHRDGRLKETDQILAINGQALDQTITHQQAISILQK--AKDTVQLVIARGSLPQY 114 (117)
T ss_dssp CCCTTSHHHHHCCCCTTCEEEEETTEECCTTSCHHHHHHHHHH--CCSEEEEEEESSCCGGG
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc--CCCEEEEEEEeCCccee
Confidence 567889999999 9999999999999999 88999988876 68999999999987543
No 196
>1whd_A RGS3, regulator of G-protein signaling 3; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.41 E-value=5.4e-07 Score=71.36 Aligned_cols=53 Identities=19% Similarity=0.147 Sum_probs=45.4
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++||++||+|++|||++|.+ ..++.+++.. .++++.|+|.|++.
T Consensus 42 ~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~ 96 (100)
T 1whd_A 42 AVDSGGPAERAGLQQLDTVLQLNERPVEHWKCVELAHEIRS--CPSEIILLVWRVSG 96 (100)
T ss_dssp BCCTTSHHHHHTCCSSCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEEECCS
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 56788899999999999999999999994 6888888876 35679999999853
No 197
>3r68_A Na(+)/H(+) exchange regulatory cofactor NHE-RF3; PDZ domain, adaptor protein, SR-BI, signaling protein; 1.30A {Mus musculus} SCOP: b.36.1.0 PDB: 3r69_A*
Probab=98.41 E-value=3.8e-07 Score=71.27 Aligned_cols=54 Identities=20% Similarity=0.293 Sum_probs=45.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.++ .++.+++.. .++.+.+.+.|.+..
T Consensus 35 ~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~~~~~~~r~~~~ 90 (95)
T 3r68_A 35 DIEPGSPAEAAGLKNNDLVVAVNGKSVEALDHDGVVEMIRK--GGDQTTLLVLDKELE 90 (95)
T ss_dssp CCCTTSHHHHHTCCTTEEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEEECC--
T ss_pred EECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEECCccc
Confidence 567889999999999999999999999998 899998876 567778888776654
No 198
>2yt7_A Amyloid beta A4 precursor protein-binding family A member 3; neuron-specific X11L2 protein, neuronal MUNC18-1-interacting protein 3, MINT-3; NMR {Homo sapiens}
Probab=98.41 E-value=2.6e-07 Score=73.37 Aligned_cols=53 Identities=21% Similarity=0.291 Sum_probs=48.0
Q ss_pred cccccccccc-cCCCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAY-GRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~-~gl~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.+++++++ ++|++||+|++|||++| .+..++.+++...++|+.|+|+|.|.
T Consensus 43 ~V~~~spA~~~ggl~~GD~I~~Ing~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~ 98 (101)
T 2yt7_A 43 NLLHGGPAERSGALSIGDRLTAINGTSLVGLPLAACQAAVRETKSQTSVTLSIVHC 98 (101)
T ss_dssp EECTTSTTGGGSSCCTTCEEEEESSCBCTTSCHHHHHHHHHHTTTSSEEEEEECCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEeC
Confidence 5678889988 77999999999999999 89999999999877899999999884
No 199
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=98.40 E-value=3.2e-07 Score=79.48 Aligned_cols=62 Identities=13% Similarity=0.182 Sum_probs=50.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHH-HHHHHhcCCCCCEEEEEEEECCEEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSD-LYRILDQCKVGDEVIVEVLRGDQKEKIPVK 377 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~-l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 377 (385)
.+.++++++.+||++||+|++|||++|.++.+ +...+....+|++++++|.|+++.++++++
T Consensus 33 ~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~~~~~~~~~v~l~vr~~~~~~~v~l~ 95 (166)
T 1w9e_A 33 LVQANSPASLVGLRFGDQVLQINGENCAGWSSDKAHKVLKQAFGEKITMTIRDRPFERTITMH 95 (166)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHCCSSEEEEEEECCTTCEEEEEE
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhcCCCCEEEEEEEcCCCcEEEEEe
Confidence 45688899999999999999999999999987 665555556889999999444477777765
No 200
>1m5z_A GRIP, AMPA receptor interacting protein; six beta-strands and two alpha-helices, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1
Probab=98.39 E-value=2.9e-07 Score=71.40 Aligned_cols=51 Identities=14% Similarity=0.167 Sum_probs=42.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHH--HHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~--l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++++.+||++||+|++|||++|.++.+ ....+. +.|+.+.|+|.|+
T Consensus 38 ~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~ 90 (91)
T 1m5z_A 38 NIRPAGPGDLGGLKPYDRLLQVNHVRTRDFDCCLVVPLIA--ESGNKLDLVISRN 90 (91)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHH--TSTTEEEEEEEEC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHH--cCCCEEEEEEEeC
Confidence 45678899999999999999999999998643 444444 3689999999986
No 201
>2djt_A Unnamed protein product; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.38 E-value=3.4e-07 Score=72.87 Aligned_cols=54 Identities=19% Similarity=0.268 Sum_probs=46.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|.+ ..++.+++.. +|+++.|+|.|+|+.
T Consensus 44 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~g~~ 100 (104)
T 2djt_A 44 GLLKDGPAQRCGRLEVGDLVLHINGESTQGLTHAQAVERIRA--GGPQLHLVIRRPLSG 100 (104)
T ss_dssp EECTTCHHHHHCSCCTTCBEEEETTEECTTCCHHHHHHHHHH--TCSEEEEEECCCCCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCCC
Confidence 456788999999 99999999999999988 5677777765 689999999998864
No 202
>2kjd_A Sodium/hydrogen exchange regulatory cofactor NHE- RF1; PDZ domain, protein, acetylation, cell projection, disease mutation, membrane; NMR {Homo sapiens}
Probab=98.37 E-value=1.8e-07 Score=77.38 Aligned_cols=57 Identities=16% Similarity=0.087 Sum_probs=51.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++... +|+.+.++|.|+|+.++
T Consensus 39 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v~R~g~~~~ 97 (128)
T 2kjd_A 39 SVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG-GDETKLLVVDRETDEFF 97 (128)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHTT-CSEEEEEEECHHHHHHH
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCEEEEEEEeCCcceE
Confidence 45678899999999999999999999999 99999999876 88999999999987655
No 203
>2vwr_A Ligand of NUMB protein X 2; protein-binding, metal-binding, zinc, LNX2_human, zinc-finger, polymorphism, ring finger protein 1; 1.3A {Homo sapiens}
Probab=98.37 E-value=2.4e-07 Score=72.55 Aligned_cols=54 Identities=22% Similarity=0.308 Sum_probs=44.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+++| |++||+|++|||++|.+. .+....+.. +|+.+.|+|.|+++.
T Consensus 35 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 91 (95)
T 2vwr_A 35 DLLEGGLAAQDGRLSSNDRVLAINGHDLKYGTPELAAQIIQA--SGERVNLTIARPGKP 91 (95)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEEESCS
T ss_pred EeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEcCCcC
Confidence 466889999999 999999999999999874 455555543 699999999998763
No 204
>2rcz_A Tight junction protein ZO-1; PDZ, domain-swapping, cell junction, membrane, phosphorylati domain, protein binding; 1.70A {Homo sapiens} PDB: 2jwe_A 2osg_A
Probab=98.37 E-value=4.2e-07 Score=68.53 Aligned_cols=52 Identities=15% Similarity=0.270 Sum_probs=44.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++++| |++||+|++|||+++. +..++.+++... ++.+.++|.|+|
T Consensus 27 ~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~R~g 81 (81)
T 2rcz_A 27 EISQDSLAARDGNIQEGDVVLKINGTVTENMSLTDAKTLIERS--KGKLKMVVQRDE 81 (81)
T ss_dssp EECTTSHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHHTS--TTEEEEEEEC--
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHCC--CCeEEEEEEeCC
Confidence 456788898999 9999999999999999 999999988763 459999999875
No 205
>1n7e_A AMPA receptor interacting protein GRIP; PDZ, protein binding; 1.50A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1n7f_A
Probab=98.36 E-value=4.7e-07 Score=71.13 Aligned_cols=54 Identities=17% Similarity=0.275 Sum_probs=47.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++. .+|+.+.|+|.|+|+.
T Consensus 36 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~--~~g~~v~l~v~R~~~~ 92 (97)
T 1n7e_A 36 SLTKGGLAERTGAIHIGDRILAINSSSLKGKPLSEAIHLLQ--MAGETVTLKIKKQTDA 92 (97)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHH--TCCSEEEEEEECCCCC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHH--cCCCeEEEEEEeCCCC
Confidence 456788999999 99999999999999974 678888886 4799999999998864
No 206
>2vsv_A Rhophilin-2; scaffold protein, RHO GTPase binding, protein-binding, RHOB, nitration, cytoplasm, PDZ domain, CAsp8; 1.82A {Homo sapiens}
Probab=98.35 E-value=6e-07 Score=72.51 Aligned_cols=55 Identities=18% Similarity=0.086 Sum_probs=45.4
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|. +..++.+++.. ..++.++|+|.|....
T Consensus 50 ~V~~gspA~~AGL~~GD~Il~VnG~~v~~~~~~dv~~~i~~-~~~~~v~l~V~~~~~~ 106 (109)
T 2vsv_A 50 FLDPYCSASVAGAREGDYIVSIQLVDCKWLTLSEVMKLLKS-FGEDEIEMKVVSLLDE 106 (109)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHT-TTTSCEEEEEESCC--
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCeEEEEEEECCCc
Confidence 5568889999999999999999999999 66999988875 3455699999986543
No 207
>1wfv_A Membrane associated guanylate kinase inverted-2; atrophin-1 interacting protein 1, activin receptor interacting protein 1; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.33 E-value=4.1e-07 Score=72.14 Aligned_cols=54 Identities=19% Similarity=0.286 Sum_probs=45.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|.+ ..++.+++. +.|+.+.|+|.|+++.
T Consensus 42 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~~~~ 98 (103)
T 1wfv_A 42 RLAEDGPAIRNGRMRVGDQIIEINGESTRDMTHARAIELIK--SGGRRVRLLLKRGTGS 98 (103)
T ss_dssp CBCTTSHHHHHCSSCTTCEEEEETTEECSSCCHHHHHHHHH--HHCSEECEEEECTTCS
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--cCCCeEEEEEEECCCC
Confidence 566788999999 99999999999999997 466666665 4689999999998864
No 208
>2q9v_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; Cys Ser mutant, S genomics consortium, SGC, transferase; 2.00A {Homo sapiens}
Probab=98.33 E-value=2.5e-07 Score=71.60 Aligned_cols=54 Identities=19% Similarity=0.209 Sum_probs=46.8
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++|+++| |++||+|++|||++| .+..++.+++.....++.++|+|.|++
T Consensus 33 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~~~~v~l~v~R~~ 89 (90)
T 2q9v_A 33 HIVPLGAADTDGRLRSGDELISVDGTPVIGKSHQLVVQLMQQAAKQGHVNLTVRQTR 89 (90)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHHHHHHTEEEEEEEECC
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecc
Confidence 567889999999 999999999999999 568888888887655679999999964
No 209
>2awx_A Synapse associated protein 97; membrane protein, synaptic signaling, trafficking protein; HET: HIS; 1.80A {Rattus norvegicus} PDB: 2g2l_A 2awu_A 2aww_A 3rl8_A
Probab=98.32 E-value=3.1e-07 Score=73.31 Aligned_cols=61 Identities=15% Similarity=0.139 Sum_probs=45.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++...+.. .|+.+.|+|.|+++...+.++.
T Consensus 39 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~~~~~p 102 (105)
T 2awx_A 39 KIIEGGAAHKDGKLQIGDKLLAVNSVSLEEVTHEEAVTALKN--TSDFVYLKVAKPTSMYISRHHH 102 (105)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHS--CCSEEEEEEECCCC--------
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCCCCCccccc
Confidence 456788999999 99999999999999976 5566666654 4899999999999887776653
No 210
>3sfj_A TAX1-binding protein 3; PDZ:peptide complex, signaling protein-inhibitor complex; 1.24A {Homo sapiens} PDB: 3dj3_A
Probab=98.31 E-value=5.3e-07 Score=71.69 Aligned_cols=52 Identities=21% Similarity=0.220 Sum_probs=45.6
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++++.+||++||+|++|||++|.+ +.++.+.+.. .+|+.+.|+|.|+
T Consensus 51 ~V~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~R~ 104 (104)
T 3sfj_A 51 RVSEGGPAEIAGLQIGDKIMQVNGWDMTMVTHDQARKRLTK-RSEEVVRLLVTRQ 104 (104)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHTC-TTCSEEEEEEEEC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh-CCCCEEEEEEEcC
Confidence 45678999999999999999999999976 5589888876 6899999999985
No 211
>2r4h_A Membrane-associated guanylate kinase, WW and PDZ containing protein 1; transferase, STRU genomics, structural genomics consortium, SGC, ATP-binding; HET: HIS; 2.05A {Homo sapiens}
Probab=98.31 E-value=8.7e-07 Score=71.69 Aligned_cols=54 Identities=22% Similarity=0.326 Sum_probs=45.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|.+ ..++..++.. .|++++|+|.|+++.
T Consensus 55 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~ 111 (112)
T 2r4h_A 55 RLAEDGPAERSGKMRIGDEILEINGETTKNMKHSRAIELIKN--GGRRVRLFLKRGETS 111 (112)
T ss_dssp EECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHT--TTTEEEEEEECCEEE
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 456788999999 99999999999999977 4666666654 689999999998764
No 212
>3soe_A Membrane-associated guanylate kinase, WW and PDZ containing protein 3; structural genomics consortium, SGC, PDZ domain, signaling P; 1.60A {Homo sapiens}
Probab=98.31 E-value=1e-06 Score=71.49 Aligned_cols=53 Identities=28% Similarity=0.363 Sum_probs=45.2
Q ss_pred cccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEEE
Q 016647 322 RDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEKI 374 (385)
Q Consensus 322 ~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~ 374 (385)
++..+||++||+|++|||++|.++ .|+.++|.+.+.|+.|.|+|.|+|...-+
T Consensus 44 ~~~~aGL~~GD~Il~VNG~~v~~~~h~evv~~lk~~~~G~~v~L~V~R~g~~~p~ 98 (113)
T 3soe_A 44 SQWCQGLQKGDIIKEIYHQNVQNLTHLQVVEVLKQFPVGADVPLLILRGGPPSPT 98 (113)
T ss_dssp GGGSTTCCTTCEEEEETTEECTTSCHHHHHHHHHHSCTTCEEEEEEEESSCC---
T ss_pred hHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCCCEEEEEEEECCccCcc
Confidence 467899999999999999999965 68999999888899999999999875433
No 213
>2edv_A FERM and PDZ domain-containing protein 1; cytoskeletal-associated protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.30 E-value=7.8e-07 Score=69.91 Aligned_cols=51 Identities=22% Similarity=0.326 Sum_probs=42.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++ +||++||+|++|||++|.+ ..++...+.. +|+.+.|+|+|++
T Consensus 37 ~V~~~spA~-agL~~GD~Il~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~ 89 (96)
T 2edv_A 37 AVTAGGSAH-GKLFPGDQILQMNNEPAEDLSWERAVDILRE--AEDSLSITVVRCT 89 (96)
T ss_dssp CBCSSSSST-TTSCTTCBEEEESSCBSTTCCHHHHHHHHHH--CSSCEEEEEEECC
T ss_pred EECCCCchh-hCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 566778885 9999999999999999987 5566666654 6999999999986
No 214
>1d5g_A Human phosphatase HPTP1E; protein-peptide complex, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 3lnx_A 3lny_A 3pdz_A 1vj6_A 1gm1_A 1ozi_A
Probab=98.30 E-value=8.2e-07 Score=69.49 Aligned_cols=53 Identities=17% Similarity=0.268 Sum_probs=46.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|. +..++.+++.. .|+++.|+|.|++.
T Consensus 39 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 94 (96)
T 1d5g_A 39 AVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLEKGQS 94 (96)
T ss_dssp EECTTSHHHHTTCCCTTCEEEEETTEECTTCCHHHHHHHHHS--CCSEEEEEEECCSC
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCC
Confidence 456788999999 9999999999999999 56788888765 68999999999864
No 215
>2fne_A Multiple PDZ domain protein; structural protein, structural genomics, SGC, structural genomics consortium, unknown function; 1.83A {Homo sapiens} SCOP: b.36.1.1
Probab=98.30 E-value=6.5e-07 Score=73.14 Aligned_cols=54 Identities=24% Similarity=0.342 Sum_probs=46.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+++| |++||+|++|||++|. +..++.+++.. .+++|+|+|.|+|+.
T Consensus 59 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~g~~ 115 (117)
T 2fne_A 59 TVFAKGAASEDGRLKRGDQIIAVNGQSLEGVTHEEAVAILKR--TKGTVTLMVLSSDET 115 (117)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEEECSCE
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 566889999998 9999999999999999 78888888876 355699999999875
No 216
>2db5_A INAD-like protein; PDZ domain, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ, structural genomics; NMR {Homo sapiens}
Probab=98.30 E-value=9.5e-07 Score=73.13 Aligned_cols=54 Identities=15% Similarity=0.132 Sum_probs=48.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC---CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS---NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~---s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|. +..++.+++.. .|+.|.|+|.|++..
T Consensus 60 ~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~~l~~--~~~~v~l~v~r~~~~ 117 (128)
T 2db5_A 60 DVQPGSVADRDQRLKENDQILAINHTPLDQNISHQQAIALLQQ--TTGSLRLIVAREPVH 117 (128)
T ss_dssp CCCTTSHHHHTCCCCSSCBEEEESSCBCSTTSCHHHHHHHHHH--CCSEEEEEEEECCCS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCCHHHHHHHHHc--CCCeEEEEEEcCCCC
Confidence 567889999999 9999999999999998 88899988876 689999999998643
No 217
>1g9o_A NHE-RF; PDZ domain, complex, signaling protein; 1.50A {Homo sapiens} SCOP: b.36.1.1 PDB: 1i92_A 1gq4_A 1gq5_A 2ocs_A
Probab=98.29 E-value=6e-07 Score=69.55 Aligned_cols=55 Identities=15% Similarity=0.178 Sum_probs=44.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||+++.+ ..++.+++... .++.+.+.+.|++++
T Consensus 33 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~-~~~~~~~~~~r~~~~ 89 (91)
T 1g9o_A 33 LVEPGSPAEKAGLLAGDRLVEVNGENVEKETHQQVVSRIRAA-LNAVRLLVVDPETDE 89 (91)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHTC-SSEEEEEEECCCCSC
T ss_pred EECCCCHHHHCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC-CCcEEEEEEcCCccc
Confidence 56788999999999999999999999998 67888888763 466666666666643
No 218
>1va8_A Maguk P55 subfamily member 5; PDZ domain, palmitoylated 5, PALS1 protein, structural genomics, riken structural genomics/proteomics initiative; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.29 E-value=6.3e-07 Score=72.65 Aligned_cols=54 Identities=11% Similarity=0.251 Sum_probs=47.2
Q ss_pred cccccccccccCC-CCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRL-ILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl-~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++|| ++||+|++|||++|. +..++.+++... ++++.|+|.|+++.
T Consensus 54 ~V~~~spA~~aGll~~GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~~ 110 (113)
T 1va8_A 54 RIVKGGAAEKSGLLHEGDEVLEINGIEIRGKDVNEVFDLLSDM--HGTLTFVLIPSSGP 110 (113)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CEEEEEEEECCCCC
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEECCcc
Confidence 5668899999999 999999999999999 678999988763 46899999998864
No 219
>3rle_A Golgi reassembly-stacking protein 2; PDZ, tether, golgin, membrane protein; 1.65A {Homo sapiens} PDB: 4edj_A
Probab=98.29 E-value=3.4e-07 Score=82.50 Aligned_cols=61 Identities=15% Similarity=0.211 Sum_probs=52.4
Q ss_pred cccccccccccCCCC-CcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCE--EEEEEEEe
Q 016647 316 GLLSTKRDAYGRLIL-GDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQ--KEKIPVKL 378 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~-GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~--~~~~~v~~ 378 (385)
.+.++++++++||++ ||+|++|||+ |.++.++.+++... +|+++.|+|+|++. ..+++++.
T Consensus 118 ~V~~~spA~~aGl~~~GD~I~~ing~-v~~~~~l~~~l~~~-~g~~v~l~v~r~~~~~~~~v~l~p 181 (209)
T 3rle_A 118 EVESNSPAALAGLRPHSDYIIGADTV-MNESEDLFSLIETH-EAKPLKLYVYNTDTDNCREVIITP 181 (209)
T ss_dssp EECTTSHHHHHTCCTTTEEEEEESSC-CCSSSCHHHHHHHT-TTSCEEEEEEETTTTEEEEEEECC
T ss_pred EeCCCChHHHCCCCCCCCEEEECCCE-eCCHHHHHHHHHhC-CCCeEEEEEEECCceEEEEEEEEe
Confidence 456788999999999 9999999998 99999999999986 89999999999764 44555544
No 220
>3axa_A Afadin, nectin-3, protein AF-6; PDZ domain, fusion protein, cell adhesion; 2.78A {Mus musculus} PDB: 1xz9_A 2exg_A* 1t2m_A 2ain_A
Probab=98.29 E-value=1.1e-06 Score=70.08 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=46.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|.+ ..++..++.. .|+.+.|+|.|+++.
T Consensus 44 ~V~~~spA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 100 (106)
T 3axa_A 44 SVVKGGAADVDGRLAAGDQLLSVDGRSLVGLSQERAAELMTR--TSSVVTLEVAKQGAI 100 (106)
T ss_dssp EEBTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEECCCSS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 567889999999 99999999999999985 6666666654 699999999998864
No 221
>2opg_A Multiple PDZ domain protein; structural protein, structural genomics, structural genomics consortium, SGC; 1.50A {Homo sapiens}
Probab=98.28 E-value=7.5e-07 Score=70.01 Aligned_cols=56 Identities=21% Similarity=0.273 Sum_probs=46.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++.+| |++||+|++|||+++.+ ..++..++.. .++.+.|+|.|+++..+
T Consensus 36 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~ 94 (98)
T 2opg_A 36 EVYEEGAACKDGRLWAGDQILEVNGIDLRKATHDEAINVLRQ--TPQRVRLTLYRDEAPYK 94 (98)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEECSSCCC
T ss_pred EECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCCCCCc
Confidence 456788999999 99999999999999988 4577777754 45899999999987543
No 222
>1kwa_A Hcask/LIN-2 protein; PDZ domain, neurexin, syndecan, receptor clustering, kinase; 1.93A {Homo sapiens} SCOP: b.36.1.1
Probab=98.28 E-value=7.2e-07 Score=68.94 Aligned_cols=54 Identities=20% Similarity=0.346 Sum_probs=47.4
Q ss_pred cccccccccc-cCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAY-GRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~-~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.+++++++ +||++||+|++|||+++. +++++.+++... ++ +++|+|.|.++.
T Consensus 31 ~V~~gspA~~~agL~~GD~I~~Ing~~v~~~~~~~~~~~l~~~-~~-~v~l~v~r~~~~ 87 (88)
T 1kwa_A 31 RIMHGGMIHRQGTLHVGDEIREINGISVANQTVEQLQKMLREM-RG-SITFKIVPSYRE 87 (88)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEEGGGSCHHHHHHHHHHC-CE-EEEEEEECCCCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhcC-CC-cEEEEEECCcCC
Confidence 5668889998 899999999999999999 899999999875 45 999999998753
No 223
>2eno_A Synaptojanin-2-binding protein; mitochondrial outer membrane protein 25, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=1.4e-06 Score=71.23 Aligned_cols=54 Identities=28% Similarity=0.259 Sum_probs=45.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~~--~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|.++. ++..++.. .|+.++|+|.|+++.
T Consensus 53 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 109 (120)
T 2eno_A 53 RIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLRVQHRLQV 109 (120)
T ss_dssp EECSSSHHHHSCCSCTTCEEEEETTEECCSCCHHHHHHHHHH--HCSEEEEEEEEEEEC
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcC
Confidence 456788999999 9999999999999999854 77777765 489999999998764
No 224
>2fcf_A Multiple PDZ domain protein; adaptor molecule, protein linker, structural genomics, struc genomics consortium, SGC, structural protein; 1.76A {Homo sapiens} SCOP: b.36.1.1
Probab=98.27 E-value=6.8e-07 Score=70.92 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=46.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++... ++.++|+|.|.++
T Consensus 45 ~V~~~spA~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 100 (103)
T 2fcf_A 45 HVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA--GNPVVFMVQSIIS 100 (103)
T ss_dssp EECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTC--CSSEEEEEECCCC
T ss_pred EeCCCCcHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCcEEEEEEECCC
Confidence 456889999999 99999999999999998 99999999874 4589999999764
No 225
>1ujd_A KIAA0559 protein; PDZ domain, structural genomics, human cDNA, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.26 E-value=9.1e-07 Score=72.14 Aligned_cols=54 Identities=17% Similarity=0.123 Sum_probs=47.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+.+| |++||+|++|||++|.+ ..++..++.. +|+.+.|+|.|+++.
T Consensus 55 ~v~~~s~A~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~ 111 (117)
T 1ujd_A 55 KILPGGSAEQTGKLMEGMQVLEWNGIPLTSKTYEEVQSIISQ--QSGEAEICVRLDLNM 111 (117)
T ss_dssp EECTTCHHHHHSSCCTTCEEEEETTEECTTCCHHHHHHHHSC--CSSCEEEEEESSCCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEcCCCCHHHHHHHHhc--CCCEEEEEEEECCcc
Confidence 567889999999 99999999999999987 5788888865 688999999998764
No 226
>2ego_A General receptor for phosphoinositides 1- associated scaffold protein; PDZ domain, ligand-free, protein binding; 1.80A {Rattus norvegicus} PDB: 2egn_A 2egk_A 2pnt_A
Probab=98.26 E-value=1.1e-06 Score=68.84 Aligned_cols=51 Identities=27% Similarity=0.420 Sum_probs=45.1
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++... ++.++|+|+|+
T Consensus 43 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~ 95 (96)
T 2ego_A 43 RVHESSPAQLAGLTPGDTIASVNGLNVEGIRHREIVDIIKAS--GNVLRLETLYG 95 (96)
T ss_dssp EECTTCHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEEECC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEEC
Confidence 45678999999999999999999999999 58999999875 56999999875
No 227
>2qbw_A PDZ-fibronectin fusion protein; fibronectin PDZ, unknown function; 1.80A {Homo sapiens} PDB: 3ch8_A
Probab=98.26 E-value=1.2e-06 Score=77.67 Aligned_cols=63 Identities=22% Similarity=0.267 Sum_probs=51.6
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEE---CCEEEEEEEEeecC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLR---GDQKEKIPVKLEPK 381 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~--~l~~~l~~~~~g~~v~l~v~R---~g~~~~~~v~~~~~ 381 (385)
.+.++++|++ ||++||+|++|||++|.++. +....+.. .|+.|.|+|+| +|+..++++++...
T Consensus 30 ~v~~~spA~~-gl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~~G~~~~~~v~~~~~ 97 (195)
T 2qbw_A 30 RVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLKT--FQNTVELIIVREVGNGAKQEIRVRVEKD 97 (195)
T ss_dssp EECTTSTTTT-TCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEEECSSSCEEEEEEEEECC
T ss_pred EECCCChHHh-CCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEcCCCCCCceeEeEeecc
Confidence 4567888999 99999999999999999854 45555544 56799999999 99999888888643
No 228
>2i1n_A Discs, large homolog 3; DLG3, PDZ, PDZ domain, signal transduction, structural genom structural genomics consortium, SGC, signaling protein; 1.85A {Homo sapiens} PDB: 2wl7_A 3rl7_B 1rgr_A* 1kef_A 1zok_A 1iu0_A 1iu2_A
Probab=98.26 E-value=8.9e-07 Score=70.16 Aligned_cols=55 Identities=24% Similarity=0.215 Sum_probs=47.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++++| |++||+|++|||++|.+ ..++..++.. +|+.+.|+|.|+++..
T Consensus 40 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~~ 97 (102)
T 2i1n_A 40 KIIPGGAAAMDGRLGVNDCVLRVNEVDVSEVVHSRAVEALKE--AGPVVRLVVRRRQPPP 97 (102)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHH--SCSEEEEEEEEECCCC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCCC
Confidence 456788999999 99999999999999987 6677777765 6899999999988653
No 229
>1vae_A Rhophilin 2, rhophilin, RHO GTPase binding protein 2; PDZ domain, intracellular signaling cascade, signal transduction; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.26 E-value=9.9e-07 Score=71.39 Aligned_cols=52 Identities=23% Similarity=0.252 Sum_probs=45.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++++.+||++||+|++|||++|. ++.++.+++... .++.+.|+|+|.
T Consensus 42 ~V~~~spA~~aGL~~GD~Il~InG~~v~~~~~~d~~~~i~~~-~~~~v~l~V~~~ 95 (111)
T 1vae_A 42 FLDPHCSASLAGAKEGDYIVSIQGVDCKWLTVSEVMKLLKSF-GGEEVEMKVVSL 95 (111)
T ss_dssp CCCTTSSHHHHHCCTTCEEEEETTEECSSCCHHHHHHHHHHT-TTSEECEEEECE
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEEec
Confidence 4567889999999999999999999999 999999999874 577899999874
No 230
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=98.25 E-value=1e-06 Score=78.27 Aligned_cols=55 Identities=15% Similarity=0.186 Sum_probs=50.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|. ++.++.+++...++|++++|+|.|+|+
T Consensus 42 ~v~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~~~g~~v~l~v~R~~~ 99 (196)
T 1p1d_A 42 YIEADSPAERCGVLQIGDRVMAINGIPTEDSTFEEANQLLRDSSITSKVTLEIEFDVA 99 (196)
T ss_dssp ECCTTSHHHHTSCCCSSCCEEEETTBCSTTSCHHHHHHHHHTCCSSSEEEEEEEECSC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCCeEEEEEEecCC
Confidence 466888999999 9999999999999999 679999999988789999999999985
No 231
>1y7n_A Amyloid beta A4 precursor protein-binding family A member 1; copper chaperone for superoxide dismutase, neuronal adaptor, protein transport; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.25 E-value=9.8e-07 Score=68.61 Aligned_cols=51 Identities=20% Similarity=0.340 Sum_probs=45.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++++++||++||+|++|||++| .+..++.+++.. .|+++.|+|++.
T Consensus 37 ~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~p~ 89 (90)
T 1y7n_A 37 SLMRGGIAERGGVRVGHRIIEINGQSVVATPHEKIVHILSN--AVGEIHMKTMPA 89 (90)
T ss_dssp EECTTSHHHHHTCCSSCEEEEETTEECTTSCHHHHHHHHHH--CCEEEEEEEECC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEEC
Confidence 456889999999999999999999999 579999999975 489999999875
No 232
>1wi2_A Riken cDNA 2700099C19; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.25 E-value=6.8e-07 Score=71.23 Aligned_cols=52 Identities=19% Similarity=0.180 Sum_probs=46.2
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++.. |+.+.|+|.|+..
T Consensus 47 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~---~~~v~l~v~r~~~ 100 (104)
T 1wi2_A 47 KVIPDSDAHRAGLQEGDQVLAVNDVDFQDIEHSKAVEILKT---AREISMRVRFFSG 100 (104)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECSSCCHHHHHHHHHH---SSSEEEEEECCCC
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC---CCEEEEEEEECCC
Confidence 45688899999999999999999999999 8999988876 7889999999754
No 233
>2fe5_A Presynaptic protein SAP102; PDZ domain, DLG3, human, structural genomics, structural GEN consortium, SGC, structural protein; HET: GOL; 1.10A {Homo sapiens} SCOP: b.36.1.1 PDB: 2x7z_A 2oqs_A 1qlc_A 2i0l_A
Probab=98.25 E-value=1.2e-06 Score=68.30 Aligned_cols=53 Identities=17% Similarity=0.265 Sum_probs=44.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++..++.. .++.++|+|.|+|+
T Consensus 39 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~g~ 94 (94)
T 2fe5_A 39 KIIEGGAAQKDGRLQIGDRLLAVNNTNLQDVRHEEAVASLKN--TSDMVYLKVAKPGS 94 (94)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCBHHHHHHHHHT--CCSEEEEEEECCCC
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcCCC
Confidence 456788999999 99999999999999988 4677766654 46799999999874
No 234
>2byg_A Channel associated protein of synapse-110; DLG2, PDZ, PDZ domain, structural genomics, structural genom consortium, SGC, phosphorylation; 1.85A {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=1.1e-06 Score=71.71 Aligned_cols=53 Identities=17% Similarity=0.219 Sum_probs=46.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|. +..++.+++.. .|+.|+|+|.|+++
T Consensus 60 ~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 115 (117)
T 2byg_A 60 KIIDGGAAQKDGRLQVGDRLLMVNNYSLEEVTHEEAVAILKN--TSEVVYLKVGKPTT 115 (117)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEEEE
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCc
Confidence 456788999999 9999999999999999 78888888875 48999999999875
No 235
>2yuy_A RHO GTPase activating protein 21; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.23 E-value=4.4e-07 Score=75.06 Aligned_cols=53 Identities=21% Similarity=0.236 Sum_probs=47.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+||++||+|++|||++|. +..++.+++.. .|+.+.|+|.|+++
T Consensus 67 ~V~~~spA~~aGL~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 121 (126)
T 2yuy_A 67 QVKEGGPAFEAGLCTGDRIIKVNGESVIGKTYSQVIALIQN--SDTTLELSVMPKDS 121 (126)
T ss_dssp CCCSSSHHHHHTCCSSCCCCEETTEECSSCCHHHHHHHHHT--CTTEEEEECCCCCC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCC
Confidence 4668899999999999999999999998 89999999986 39999999999875
No 236
>3qik_A Phosphatidylinositol 3,4,5-trisphosphate-dependen exchanger 1 protein; PDZ domain, structural genomics consortium, SGC, hydrolase R; 2.29A {Homo sapiens}
Probab=98.23 E-value=6.9e-07 Score=70.76 Aligned_cols=51 Identities=22% Similarity=0.123 Sum_probs=44.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcC-CCCCEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQC-KVGDEVIVEVL 366 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~-~~g~~v~l~v~ 366 (385)
.+.+++||+.+||++||+|++|||++|. +++|+.+.+.+. +.|+.+.|.|-
T Consensus 45 ~V~~gSpA~~AGL~~GD~I~~Ing~~v~~~s~~dv~~~i~~~~~~g~~v~LLV~ 98 (101)
T 3qik_A 45 SVQRGSLAEVAGLQVGRKIYSINEDLVFLRPFSEVESILNQSFCSRRPLRLLVA 98 (101)
T ss_dssp EECTTSHHHHHTCCTTCBEEEETTEESTTSCHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEEcCcCCHHHHHHHHHHhhccCCeEEEEEe
Confidence 5778999999999999999999999984 999999999874 46888888774
No 237
>3qe1_A Sorting nexin-27, G protein-activated inward RECT potassium channel 3 chimera; PDZ domain, PDZ binding, GIRK3 regulation, early endosomes; 1.68A {Rattus norvegicus} SCOP: b.36.1.0 PDB: 3qdo_A 3qgl_A
Probab=98.23 E-value=9.7e-07 Score=70.58 Aligned_cols=54 Identities=22% Similarity=0.296 Sum_probs=47.7
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+.+||++||+|++|||++|. +..++.+++.. .|+.+.|+|.|.+.+
T Consensus 49 ~v~~~spA~~aGl~~GD~I~~ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (107)
T 3qe1_A 49 AVLPGGAADRAGVRKGDRILEVNGVNVEGATHKQVVDLIRA--GEKELILTVLSVESE 104 (107)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECTTCCHHHHHHHHHH--CSSEEEEEEECSSCC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEcCCCC
Confidence 5678899999999999999999999999 77899998875 589999999997653
No 238
>1um1_A KIAA1849 protein, RSGI RUH-007; PDZ domain, human cDNA, structural genomics, riken structural genomics/proteomics initiative, unknown function; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.23 E-value=6.9e-08 Score=77.84 Aligned_cols=61 Identities=23% Similarity=0.240 Sum_probs=49.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
.+.++++++++| |++||+|++|||++|.+ ..++..++.. .|+.+.|+|.|+++.+++++++
T Consensus 42 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~~~~~v~~ 105 (110)
T 1um1_A 42 TLLPGSPAAADGRLSLGDRILEVNGSSLLGLGYLRAVDLIRH--GGKKMRFLVAKSDVETAKKIHS 105 (110)
T ss_dssp EECTTSHHHHHSCCCTTCEEEEESSCBCSSCCHHHHHHHHHT--CCSEEEEEEECCCHHHHHHHSS
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcceeEEEEe
Confidence 456889999999 99999999999999975 5666666654 5899999999999876655543
No 239
>2ejy_A 55 kDa erythrocyte membrane protein; GPC, maguk, PDZ, membrane protein; NMR {Homo sapiens} PDB: 2ev8_A
Probab=98.23 E-value=1e-06 Score=69.55 Aligned_cols=51 Identities=22% Similarity=0.298 Sum_probs=45.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++|+++| |++||+|++|||++|.+ ++++.+++... +++++|+|.+.
T Consensus 42 ~V~~gspA~~aG~L~~GD~Il~ING~~v~~~~~~~~~~~l~~~--~~~v~L~V~~~ 95 (97)
T 2ejy_A 42 RILHGGMIHRQGSLHVGDEILEINGTNVTNHSVDQLQKAMKET--KGMISLKVIPN 95 (97)
T ss_dssp EECSSSHHHHHTCCCTTCEEEEETTBCCCSSCSHHHHHHHHHC--CEEEEEEEECC
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEEC
Confidence 567889999999 99999999999999995 89999999873 67899998875
No 240
>2pka_B Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_B 1hia_B
Probab=98.23 E-value=4.7e-06 Score=70.94 Aligned_cols=99 Identities=19% Similarity=0.275 Sum_probs=61.4
Q ss_pred CCCCeEEEEEcCCC---CCCcceecCCCCCCCCCCEEEEEeCCCCCC--------CceEEeEEeeeeeeeccCCC-CCCc
Q 016647 197 QDKDVAVLRIDAPK---DKLRPIPIGVSADLLVGQKVYAIGNPFGLD--------HTLTTGVISGLRREISSAAT-GRPI 264 (385)
Q Consensus 197 ~~~DlAlLkv~~~~---~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~--------~~~~~G~Vs~~~~~~~~~~~-~~~~ 264 (385)
..+||||||++.+. ..+.|+.|.... ...|+.+++.||..... .......+.-+....+.... ....
T Consensus 6 ~~nDIALl~L~~~v~~~~~v~picLp~~~-~~~~~~~~v~GWG~~~~~~~~~~~~~~L~~~~~~i~~~~~C~~~~~~~~~ 84 (152)
T 2pka_B 6 YSHDLMLLRLQSPAKITDAVKVLELPTQE-PELGSTCEASGWGSIEPGPDDFEFPDEIQCVQLTLLQNTFCADAHPDKVT 84 (152)
T ss_dssp CTTCCEEEEESSCCCCCSSCCCCCCCSSC-CCTTCEEEEEESSCSSCCSSCCCCCSBCEEEEEEEECHHHHHHHCSSBCC
T ss_pred CCCCEEEEEECCCCcCCCCEEeEECCCCC-CCCCCEEEEEecccccCCCCcCCCCccceEEEeEEcCHHHhhhhhcCCCC
Confidence 46799999998764 246788886543 46799999999974321 12233333322222221100 1112
Q ss_pred ccEEEEc-----cccCCCCCCceeeCCCccEEEEeecc
Q 016647 265 QDVIQTD-----AAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 265 ~~~i~~d-----~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
...+... ...|.|+|||||+- +|+++||+|++
T Consensus 85 ~~~iCa~~~~~~~~~C~GDsGgPL~~-~g~l~Gi~S~g 121 (152)
T 2pka_B 85 ESMLCAGYLPGGKDTCMGDSGGPLIC-NGMWQGITSWG 121 (152)
T ss_dssp TTEEEEECTTSSCBCCTTCTTCEEEE-TTEEEEEECCC
T ss_pred CCEEeeccCCCCCcccCCccccceEE-CCEEEEEEecC
Confidence 2344442 35789999999995 58999999986
No 241
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.22 E-value=2.7e-06 Score=75.71 Aligned_cols=53 Identities=28% Similarity=0.383 Sum_probs=46.3
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+ ||++||+|++|||++|.++ .++..++.. +|+++.++|.|+++
T Consensus 39 ~v~~~spA~~aggl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 94 (200)
T 2qt5_A 39 NLRQGGIAARSDQLDVGDYIKAVNGINLAKFRHDEIISLLKN--VGERVVLEVEYELP 94 (200)
T ss_dssp EECTTSHHHHTTSCCTTCEEEEETTEECTTSCHHHHHHHHHT--CCSEEEEEEEEECC
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEeccCC
Confidence 56678899988 9999999999999999998 888877754 58999999999774
No 242
>2dlu_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.22 E-value=1.3e-06 Score=70.34 Aligned_cols=54 Identities=20% Similarity=0.297 Sum_probs=46.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|.+ ..++.+++.. .|+.+.|+|.|+++.
T Consensus 44 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~~ 100 (111)
T 2dlu_A 44 TIVPGGLADRDGRLQTGDHILKIGGTNVQGMTSEQVAQVLRN--CGNSVRMLVARDPAG 100 (111)
T ss_dssp EECTTSSHHHHTCCCSSCEEEEESSCCCTTSCHHHHHHHHHH--HCSEEEEEEEESCTT
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCCC
Confidence 456788999999 99999999999999994 5788888875 489999999998764
No 243
>1lvm_A Catalytic domain of the nuclear inclusion protein A (NIA); beta barrel, chymotrypsin-type cystein protease, enzyme- peptide complex; 1.80A {Tobacco etch virus} SCOP: b.47.1.3 PDB: 1lvb_A 1q31_A
Probab=98.22 E-value=7.4e-05 Score=67.28 Aligned_cols=165 Identities=16% Similarity=0.267 Sum_probs=103.4
Q ss_pred hCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCC-CeEEEEecCCCeEeeE-----EEEECCC
Q 016647 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGA-SDIRVTFADQSAYDAK-----IVGFDQD 198 (385)
Q Consensus 125 ~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~-~~i~V~~~dg~~~~a~-----vv~~d~~ 198 (385)
+...|+.+....... ...--|+... + ||+|++|.++.. ..++|+...|. |... -+..-+.
T Consensus 22 Ia~~ic~l~n~sdg~-----------~~~l~gigyG-~-~iItn~HLf~~nnG~L~I~s~hG~-f~v~nt~~lki~~i~g 87 (229)
T 1lvm_A 22 ISSTICHLTNESDGH-----------TTSLYGIGFG-P-FIITNKHLFRRNNGTLLVQSLHGV-FKVKNTTTLQQHLIDG 87 (229)
T ss_dssp HHTTEEEEEEEETTE-----------EEEEEEEEET-T-EEEECGGGGGCCSSEEEEEETTEE-EEESCGGGSEEEECTT
T ss_pred hheEEEEEEeccCCc-----------eEEEEEEeEC-C-EEEeChhhhccCCCcEEEEeCCCe-EEeCCCCceeeEEeCC
Confidence 456688887743221 1233477775 3 999999999865 67888887663 2211 2344478
Q ss_pred CCeEEEEEcCCCCCCcceecCC-CCCCCCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCC
Q 016647 199 KDVAVLRIDAPKDKLRPIPIGV-SADLLVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 277 (385)
Q Consensus 199 ~DlAlLkv~~~~~~~~~l~l~~-~~~~~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G 277 (385)
.||.++|+.. ++||.+-.. -..++.||+|+++|.-+.... ....|+......... . ..+...-.....|
T Consensus 88 ~DiiiIrmPk---DfpPf~~~l~FR~P~~~e~V~lVg~~fq~k~--~~s~vSesS~i~p~~-~----~~fWkHwIsT~~G 157 (229)
T 1lvm_A 88 RDMIIIRMPK---DFPPFPQKLKFREPQREERICLVTTNFQTKS--MSSMVSDTSCTFPSS-D----GIFWKHWIQTKDG 157 (229)
T ss_dssp SSCEEEECCT---TSCCCCSCCCBCCCCTTCEEEEEEEECSSSS--CEEEECCCEECEEET-T----TTEEEECBCCCTT
T ss_pred ccEEEEeCCC---cCCCcccccccCCCCCCCeEEEEEeEeecCC--ccEEECCcceeEecC-C----CCEeEEEeeCCCC
Confidence 8999999965 455544321 245889999999997544322 222333222111111 1 2334444566689
Q ss_pred CCCceeeC-CCccEEEEeecccCCCCCCCCceeeecccccc
Q 016647 278 NSGGPLLD-SSGSLIGINTAIYSPSGASSGVGFSIPVDTGL 317 (385)
Q Consensus 278 ~SGGPlvn-~~G~VVGI~s~~~~~~~~~~~~g~aIP~~~~v 317 (385)
+=|.|+++ .||.+|||++..... ...+|..|+...+
T Consensus 158 ~CGlPlVs~~Dg~IVGiHsl~~~~----~~~NyF~~f~~~f 194 (229)
T 1lvm_A 158 QCGSPLVSTRDGFIVGIHSASNFT----NTNNYFTSVPKNF 194 (229)
T ss_dssp CTTCEEEETTTCCEEEEEEEEETT----SCSEEEEECCTTH
T ss_pred cCCCcEEECCCCcEEEEEcccccC----CCeEEEeCCCHHH
Confidence 99999998 799999999976432 2457777776643
No 244
>3k1r_A Harmonin; protein-protein complex, alternative splicing, coiled coil, deafness, hearing, non-syndromic deafness, polymorphism; 2.30A {Homo sapiens} PDB: 2kbq_A 2kbr_A 2lsr_A
Probab=98.22 E-value=2.2e-06 Score=76.07 Aligned_cols=53 Identities=19% Similarity=0.250 Sum_probs=47.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.+ ..++.+++.. |+.+.|+|.|+|+.
T Consensus 116 ~V~~gspA~~aGL~~GD~Il~vng~~v~~~~~~~~~~~l~~---~~~v~l~v~r~g~~ 170 (192)
T 3k1r_A 116 HLIKGGQADSVGLQVGDEIVRINGYSISSCTHEEVINLIRT---EKTVSIKVRHIGLI 170 (192)
T ss_dssp EECTTSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHTS---SSEEEEEEEECCEE
T ss_pred EECCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHcC---CCeEEEEEEECCcc
Confidence 56788999999999999999999999998 8888888765 89999999999884
No 245
>2qg1_A Multiple PDZ domain protein; MPDZ, MUPP1, structural genomics, structural genomics consortium, SGC, signaling protein; 1.40A {Homo sapiens}
Probab=98.22 E-value=1.7e-06 Score=67.06 Aligned_cols=53 Identities=26% Similarity=0.262 Sum_probs=44.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||+++.+. .++..++.. .|+.++|+|.|.+.
T Consensus 35 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 90 (92)
T 2qg1_A 35 DIVKGGIADADGRLMQGDQILMVNGEDVRNATQEAVAALLKC--SLGTVTLEVGRIST 90 (92)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEECCCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEcccc
Confidence 567889999999 999999999999999874 566666654 58899999999863
No 246
>4a8c_A Periplasmic PH-dependent serine endoprotease DEGQ; chaperone, hydrolase; 7.50A {Escherichia coli} PDB: 4a8a_A 4a8b_A 4a9g_A
Probab=98.21 E-value=2.7e-06 Score=85.11 Aligned_cols=65 Identities=20% Similarity=0.347 Sum_probs=56.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEeecCC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKLEPKP 382 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~~~~~ 382 (385)
.+.++++++++||++||+|++|||++|.+++|+.+++.. + ++.+.|+|+|+|+.+++.++.....
T Consensus 369 ~V~~~spA~~aGL~~GD~I~~vng~~v~~~~~~~~~l~~-~-~~~v~l~v~R~g~~~~~~~~~~~~~ 433 (436)
T 4a8c_A 369 EVVKGSPAAQAGLQKDDVIIGVNRDRVNSIAEMRKVLAA-K-PAIIALQIVRGNESIYLLMRLEHHH 433 (436)
T ss_pred EeCCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHh-C-CCeEEEEEEECCEEEEEEEEecccC
Confidence 466788999999999999999999999999999999987 3 3489999999999988887765443
No 247
>2edp_A Fragment, shroom family member 4; APX/shroom family member, KIAA1202 protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.21 E-value=9.5e-07 Score=69.90 Aligned_cols=54 Identities=13% Similarity=0.190 Sum_probs=45.6
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCCH-HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSNG-SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s~-~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++ ||++||+|++|||++|.++ .++.+.+.. .++.+.|+|.|+++.
T Consensus 41 ~V~~~spA~~agGL~~GD~I~~ing~~v~~~~~~~~~~~~~--~~~~v~l~v~R~~~~ 96 (100)
T 2edp_A 41 KIEDGGKAALSQKMRTGDELVNINGTPLYGSRQEALILIKG--SFRILKLIVRRRNSG 96 (100)
T ss_dssp CCCTTSHHHHHTSCCTTCEEEEETTEECCSCSHHHHHHHHT--CCSSCEEEEEECCCS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEEccchHHHHHHHHHh--CCCeEEEEEEeCCCC
Confidence 56788999998 9999999999999999985 556666654 478999999999864
No 248
>2iwo_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP-1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.7A {Homo sapiens} PDB: 2iwp_A
Probab=98.21 E-value=4.1e-07 Score=74.67 Aligned_cols=56 Identities=18% Similarity=0.294 Sum_probs=46.4
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++|+++ ||++||+|++|||++|.+ ..++..++.. .+++++|+|.|+|+..+
T Consensus 59 ~V~~~spA~~aggL~~GD~Il~VnG~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~g~~~~ 117 (120)
T 2iwo_A 59 MMHPTGVAAQTQKLRVGDRIVTICGTSTEGMTHTQAVNLLKN--ASGSIEMQVVAGGDVSE 117 (120)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEECTTCBHHHHHHHHHH--CCSEEEEEEECCTTSSS
T ss_pred EECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccce
Confidence 45678888887 999999999999999987 5677777765 47889999999987543
No 249
>1v62_A KIAA1719 protein; structural genomics, synaptic transmission, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=7.2e-07 Score=72.77 Aligned_cols=54 Identities=20% Similarity=0.265 Sum_probs=48.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++| .+.+++.+++.. .|+.++|+|.|+++.
T Consensus 48 ~V~~~spA~~aG~l~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~~ 104 (117)
T 1v62_A 48 RIKPASVVDRSGALHPGDHILSIDGTSMEHCSLLEATKLLAS--ISEKVRLEILPVPQS 104 (117)
T ss_dssp ECCTTSHHHHHTCCCTTCBEEEETTEETTSCCHHHHHHHHHS--CSSEEEEEECCBTTB
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEECCCC
Confidence 567889999999 999999999999999 679999999984 799999999998764
No 250
>1wha_A KIAA0147 protein, scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.21 E-value=1.2e-06 Score=69.91 Aligned_cols=53 Identities=17% Similarity=0.226 Sum_probs=46.3
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++.. .|+.++|+|.|+++
T Consensus 44 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~R~~~ 99 (105)
T 1wha_A 44 RIAEGGAAHRAGTLQVGDRVLSINGVDVTEARHDHAVSLLTA--ASPTIALLLEREAG 99 (105)
T ss_dssp ECCTTSSHHHHSSCCTTCEEEEESSCBCTTCCHHHHHHHHTS--CCSCEEEEEEECCC
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 466889999999 99999999999999988 7888888865 38899999999764
No 251
>2dmz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.21 E-value=5.5e-07 Score=74.64 Aligned_cols=56 Identities=16% Similarity=0.326 Sum_probs=49.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++.. +|+.+.|+|.|+|+.++
T Consensus 52 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 110 (129)
T 2dmz_A 52 SVIPGSAAYHNGHIQVNDKIVAVDGVNIQGFANHDVVEVLRN--AGQVVHLTLVRRKTSSS 110 (129)
T ss_dssp EECTTSHHHHHTCCCSSCBEEEETTBCCTTCCHHHHHHHHHH--CCSSEEEEEEEESSSSS
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcccc
Confidence 456789999999 99999999999999999 8999999987 79999999999887543
No 252
>2jik_A Synaptojanin-2 binding protein; transmembrane, outer membrane, mitochondria distribution, PDZ, membrane, scaffold, mitochondrion, membrane protein; 1.35A {Homo sapiens} PDB: 2jin_A
Probab=98.21 E-value=1.2e-06 Score=69.28 Aligned_cols=53 Identities=26% Similarity=0.283 Sum_probs=44.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|.++ .++.+++.. .|+.+.|+|.|+++
T Consensus 43 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~ 98 (101)
T 2jik_A 43 RIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDAVDLFRN--AGYAVSLRVQHRLE 98 (101)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCCHHHHHHHHHT--CCSEEEEEEEEESC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCC
Confidence 456788899999 999999999999999875 677777754 58999999999875
No 253
>2iwn_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, HOST-virus interaction, structural genomics consortium, synaptosome, tight junction; 1.35A {Homo sapiens}
Probab=98.20 E-value=1.3e-06 Score=68.19 Aligned_cols=54 Identities=17% Similarity=0.357 Sum_probs=45.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+| |++||+|++|||++|.++ .++.+++.. +|+++.|+|.|+|+.
T Consensus 39 ~v~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~g~~ 95 (97)
T 2iwn_A 39 SITKSSAVEHDGRIQIGDQIIAVDGTNLQGFTNQQAVEVLRH--TGQTVLLTLMRRGET 95 (97)
T ss_dssp EECTTCHHHHHCCCCTTCEEEEETTEECTTSCHHHHHHHHHT--CCSEEEEEEEEEEEC
T ss_pred EeCCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCC
Confidence 456788899999 999999999999999964 566666654 799999999998753
No 254
>3i4w_A Disks large homolog 4; alpha and beta protein, alternative splicing, cell junction, cell membrane, lipoprotein, membrane, palmitate, phosphoprotein; 1.35A {Homo sapiens} SCOP: b.36.1.1 PDB: 3k82_A* 3jxt_A* 2he2_A 1pdr_A 2i0i_A
Probab=98.20 E-value=8.3e-07 Score=70.49 Aligned_cols=53 Identities=25% Similarity=0.227 Sum_probs=43.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++...+.. .|+.+.++|.|+++
T Consensus 41 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~ 96 (104)
T 3i4w_A 41 FILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKN--AGQTVTIIAQYKPE 96 (104)
T ss_dssp EECTTSHHHHHCCCCTTEEEEEETTEECTTCCHHHHHHHHHT--SCSEEEEEEEECHH
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECcc
Confidence 467889999999 99999999999999965 4455555543 68999999999854
No 255
>1v6b_A Harmonin isoform A1; structural genomics, usher syndrome, USH1, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.19 E-value=2.8e-07 Score=75.42 Aligned_cols=53 Identities=21% Similarity=0.199 Sum_probs=45.4
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCC--HHHHHHHHhcCC--CCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSN--GSDLYRILDQCK--VGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~--~g~~v~l~v~R~ 368 (385)
.+.++++|+++ ||++||.|++|||+++.+ ..++.+++.... .|+.|+|+|.|.
T Consensus 49 ~V~~gspA~~aggL~~GD~Il~Ing~~v~~~~~~~~~~~l~~~~~~~g~~v~l~v~r~ 106 (118)
T 1v6b_A 49 AVYEGGAAERHGGVVKGDEIMAINGKIVTDYTLAEAEAALQKAWNQGGDWIDLVVAVC 106 (118)
T ss_dssp ECCTTSHHHHHCSSCTTCEEEEESSCBCTTCBHHHHHHHHHHHHHHTCSEEEEEEECC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhhcCCCeEEEEEEeC
Confidence 56788999998 999999999999999997 668888877542 489999999994
No 256
>3cbz_A Dishevelled-2; PDZ domain, phage derived high affinity ligand, cytoplasm, developmental protein, phosphoprotein, WNT signaling pathway; 1.38A {Homo sapiens} PDB: 3cby_A 3cc0_A 3cbx_A 2rey_A 2f0a_A 1l6o_A 3fy5_A 2kaw_A* 1mc7_A
Probab=98.19 E-value=1.1e-06 Score=70.71 Aligned_cols=57 Identities=18% Similarity=0.261 Sum_probs=47.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCC-CCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCK-VGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~-~g~~v~l~v~R~g~~~ 372 (385)
.+.++++|+++| |++||+|++|||+++.+ ..++.+++.... .++.|+|+|.|+++..
T Consensus 39 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~v~l~v~R~~~~~ 99 (108)
T 3cbz_A 39 SIMKGGAVAADGRIEPGDMLLQVNDMNFENMSNDDAVRVLRDIVHKPGPIVLTVAKSGGGS 99 (108)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEETTSCCHHHHHHHHHHHHTSSSCEEEEEECCCC-C
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhcccCCCeEEEEEEeCCCCC
Confidence 567889999999 99999999999999998 889999888751 2345999999987643
No 257
>2e7k_A Maguk P55 subfamily member 2; PDZ domain, MPP2 protein, discs large homolog 2, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.18 E-value=1.4e-06 Score=67.69 Aligned_cols=52 Identities=35% Similarity=0.482 Sum_probs=45.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe-CCHHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV-SNGSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i-~s~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++++| |++||+|++|||++| .+++++.+++.. .++++.|+|.|..
T Consensus 35 ~V~~~spA~~ag~L~~GD~I~~ing~~v~~~~~~~~~~l~~--~~~~v~l~v~~~~ 88 (91)
T 2e7k_A 35 RILHGGMVAQQGLLHVGDIIKEVNGQPVGSDPRALQELLRN--ASGSVILKILSGP 88 (91)
T ss_dssp EECSSSHHHHHCCCCTTCEEEEETTEECTTCHHHHHHHHHT--CCSSBCEEEECCS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 567888999865 999999999999999 999999999986 4778999998853
No 258
>1qav_A Alpha-1 syntrophin (residues 77-171); beta-finger, heterodimer, membrane protein-oxidoreductase CO; 1.90A {Mus musculus} SCOP: b.36.1.1 PDB: 1z86_A 2pdz_A 2vrf_A
Probab=98.18 E-value=2e-06 Score=66.41 Aligned_cols=51 Identities=29% Similarity=0.416 Sum_probs=42.3
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++++.+ ||++||+|++|||++|.+ ..++...+.. .|+.++|+|.|-
T Consensus 36 ~V~~~spA~~aggl~~GD~I~~ing~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~ 89 (90)
T 1qav_A 36 KIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK--TGKEVVLEVKYM 89 (90)
T ss_dssp EECTTSHHHHTTCCCTTEEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEC
T ss_pred EECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEEe
Confidence 56688899998 999999999999999986 4566666654 588999999884
No 259
>3pv2_A DEGQ; trypsin fold, PDZ domain, chaperone protease, hydrolase; 2.15A {Legionella fallonii} PDB: 3pv3_A 3pv5_A 3pv4_A
Probab=98.18 E-value=1.7e-06 Score=86.95 Aligned_cols=60 Identities=30% Similarity=0.334 Sum_probs=54.1
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVK 377 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 377 (385)
.+.++++++++||++||+|++|||++|.+++|+.+++.. .++.+.|+|+|+|+.+++.++
T Consensus 392 ~V~~gspA~~aGL~~GD~I~~Vng~~v~~~~~~~~~l~~--~~~~v~l~v~R~g~~~~v~l~ 451 (451)
T 3pv2_A 392 GASENSAGWRAGIRPGDIIISANKKPVTDVKSLQTIAQE--KKKELLVQVLRGPGSMYLLVI 451 (451)
T ss_dssp EECTTSHHHHHTCCTTCEEEEETTEECCSHHHHHHHTTS--SCSCEEEEEEETTEEEEEEEC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHhc--CCCeEEEEEEECCEEEEEEeC
Confidence 456788999999999999999999999999999999976 688999999999999887763
No 260
>1tp5_A Presynaptic density protein 95; PDZ-peptide ligand complex, peptide binding protein; 1.54A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1tp3_A 1tq3_A 1be9_A 1bfe_A
Probab=98.17 E-value=1.4e-06 Score=71.13 Aligned_cols=55 Identities=24% Similarity=0.206 Sum_probs=44.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.++.+.........+|+++.++|.|+++
T Consensus 44 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~~~~~v~l~v~r~~~ 99 (119)
T 1tp5_A 44 FILAGGPADLSGELRKGDQILSVNGVDLRNASHEQAAIALKNAGQTVTIIAQYKPE 99 (119)
T ss_dssp EECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEECHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcCCCeEEEEEEECCc
Confidence 456788999999 9999999999999999876544333333478999999999764
No 261
>2dm8_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.16 E-value=2.2e-06 Score=69.56 Aligned_cols=55 Identities=25% Similarity=0.275 Sum_probs=47.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++.. .++.+.|+|.|+++.+
T Consensus 49 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~ 106 (116)
T 2dm8_A 49 EVYEEGAAARDGRLWAGDQILEVNGVDLRNSSHEEAITALRQ--TPQKVRLVVYRDEAHY 106 (116)
T ss_dssp CCCSSSHHHHHTCCCTTCEEEEETTEECSSSCHHHHHHHHHT--CCSEEEEEEECCSSCC
T ss_pred EECCCChHHhCCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEeCCccc
Confidence 466788999999 99999999999999988 6788877765 3589999999998754
No 262
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.15 E-value=2.1e-06 Score=75.68 Aligned_cols=65 Identities=20% Similarity=0.169 Sum_probs=50.8
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECC--EEEEEEEEeec
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGD--QKEKIPVKLEP 380 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g--~~~~~~v~~~~ 380 (385)
.+.++++++++| |++||+|++|||+++.++.++........+|+.+.++|.|++ ....+++++..
T Consensus 41 ~V~~~spA~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~~g~~v~l~v~r~~~~~~~~~~v~l~~ 108 (196)
T 3gsl_A 41 KIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALKEAGSIVRLYVMRRKPPAEKVMEIKLIK 108 (196)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHTSCSEEEEEEEEECCCCEEEEEEEEEE
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCcEEEEEEecCCCccccEEEEEec
Confidence 467889999999 999999999999999987665544333457999999999987 44555555543
No 263
>1q7x_A PDZ2B domain of PTP-BAS (HPTP1E); phosphatase, structural proteomics in europe, spine, structural genomics, hydrolase; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.15 E-value=1.6e-06 Score=69.46 Aligned_cols=54 Identities=17% Similarity=0.260 Sum_probs=46.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++++| |++||+|++|||++|. +..++..++.. .|+++.|+|.|+++.
T Consensus 48 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~ 104 (108)
T 1q7x_A 48 AVIPQGAAESDGRIHKGDRVLAVNGVSLEGATHKQAVETLRN--TGQVVHLLLEKGQSP 104 (108)
T ss_dssp EECTTSTHHHHTCCCSSCEEEEETTEECBSCTTSHHHHHHHH--TTSEEEEEEECCCCS
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCcc
Confidence 456788999999 9999999999999999 66788877765 589999999998864
No 264
>3b76_A E3 ubiquitin-protein ligase LNX; PDZ, bound ligand, structural genomics, structural genomics consortium, SGC, metal-binding; 1.75A {Homo sapiens}
Probab=98.15 E-value=2.9e-06 Score=69.37 Aligned_cols=52 Identities=15% Similarity=0.290 Sum_probs=46.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++|+++| |++||+|++|||+.+. +..++.+++.. .+++|+|+|.|..
T Consensus 59 ~V~~gspA~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~v~R~~ 113 (118)
T 3b76_A 59 SVEPGGVISRDGRIKTGDILLNVDGVELTEVSRSEAVALLKR--TSSSIVLKALEVK 113 (118)
T ss_dssp EECTTSHHHHHCSSCTTCEEEEETTEEGGGSCHHHHHHHHHS--CCSEEEEEEEEEE
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECC
Confidence 567889999999 9999999999999999 88899988875 4889999999853
No 265
>2dkr_A LIN-7 homolog B; LIN-7B, PDZ, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.15 E-value=2.2e-06 Score=66.49 Aligned_cols=53 Identities=23% Similarity=0.229 Sum_probs=43.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++.+++.. .++++.|+|.|+++
T Consensus 36 ~V~~~spA~~aGgl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~ 91 (93)
T 2dkr_A 36 RVIPGGVADRHGGLKRGDQLLSVNGVSVEGEQHEKAVELLKA--AQGSVKLVVRSGPS 91 (93)
T ss_dssp EECTTSHHHHHCCCCTTCBEEEETTEECTTSCHHHHHHHHHH--CCSEEEEEECCCCS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEEEEeCCC
Confidence 456788999885 99999999999999995 5788777765 36789999998753
No 266
>2g5m_B Neurabin-2; spinophilin, PDZ domain, CNS, synaptic transmission, protein binding; NMR {Rattus norvegicus}
Probab=98.14 E-value=1.5e-07 Score=76.16 Aligned_cols=61 Identities=15% Similarity=0.136 Sum_probs=50.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
.+.++++|+.+| |++||+|++|||++|.+ ..++..++.. .|+.+.|+|.|+++..+++++.
T Consensus 41 ~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~R~~~~~~~~v~p 104 (113)
T 2g5m_B 41 TVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFMIGRERPGEQSEVAQ 104 (113)
T ss_dssp ECCTTSHHHHHTCSCTTCBEEEETTEECSSCCHHHHHHHHHH--SCSSCEEEEEECCCCTTSSCSS
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCCCCcchhhh
Confidence 567889999999 99999999999999986 5566666665 4899999999999876655543
No 267
>2qkv_A Inactivation-NO-after-potential D protein; PDZ domain, scaffolding protein, membrane, sensory transduction, vision; 1.55A {Drosophila melanogaster} PDB: 2qkt_A 2qku_A
Probab=98.13 E-value=1.3e-06 Score=68.47 Aligned_cols=52 Identities=27% Similarity=0.358 Sum_probs=41.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~~--~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++|+++| |++||+|++|||++|.+.. +...++. ..++++.|+|.|..
T Consensus 37 ~V~~~spA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 91 (96)
T 2qkv_A 37 DLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVSYALFK--GANGKVSMEVTRPK 91 (96)
T ss_dssp EECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHH--TCSSEEEEEEECCC
T ss_pred EeCCCChHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHh--cCCCcEEEEEEeCC
Confidence 466889999999 9999999999999998743 3334443 36788999999963
No 268
>2iwq_A Multiple PDZ domain protein; SGC, MPDZ, MUPP1, MUPP- 1, membrane, HOST- interaction, structural genomics consortium, synaptosome, T junction; 1.80A {Homo sapiens}
Probab=98.13 E-value=1.8e-06 Score=71.11 Aligned_cols=53 Identities=19% Similarity=0.234 Sum_probs=46.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.+++||+++| |++||+|++|||++|.+ ..++.+++... ++.++|+|.|..+
T Consensus 65 ~V~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~r~~~ 120 (123)
T 2iwq_A 65 HVLEDSPAGKNGTLKPGDRIVEVDGMDLRDASHEQAVEAIRKA--GNPVVFMVQSIIS 120 (123)
T ss_dssp EECSSSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CSSEEEEEECCCC
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEECCc
Confidence 456889999999 99999999999999998 89999999764 5689999998654
No 269
>1mfg_A ERB-B2 interacting protein; PDZ domain, protein-peptide complex, erbin., signaling protein; 1.25A {Homo sapiens} SCOP: b.36.1.1 PDB: 1mfl_A
Probab=98.12 E-value=1.7e-06 Score=67.52 Aligned_cols=51 Identities=20% Similarity=0.191 Sum_probs=41.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++. ||++||+|++|||++|.+ ..++...+. ++|+.++|+|.|+.
T Consensus 41 ~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 93 (95)
T 1mfg_A 41 RVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIVREV 93 (95)
T ss_dssp EECTTSTTTT-TCCTTCEEEEETTEECTTCBHHHHHHHHH--HCCSEEEEEEEEEC
T ss_pred EECCCCchhh-CCCCCCEEEEECCEEcCCCCHHHHHHHhh--cCCCeEEEEEEeCC
Confidence 4567888888 999999999999999988 445555554 46899999999964
No 270
>1x6d_A Interleukin-16; PDZ domain, lymphocyte chemoattractant factor (LCF), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=98.12 E-value=8.1e-07 Score=72.54 Aligned_cols=57 Identities=23% Similarity=0.222 Sum_probs=47.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++|+++| |++||+|++|||++|. +..++.+++... .+..+.+++.|+++.++
T Consensus 48 ~V~~~spA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~~-~~~~~~l~v~R~~~~~~ 107 (119)
T 1x6d_A 48 RVFPNGLASQEGTIQKGNEVLSINGKSLKGTTHHDALAILRQA-REPRQAVIVTRKLTPEA 107 (119)
T ss_dssp EECSSSHHHHHTSSCTTCBCCEETTEECSSCCHHHHHHHHHHT-TSSSEEEEEEECCCSSS
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEEEcCCCccc
Confidence 567889999999 9999999999999999 577888888764 56677799999987643
No 271
>2la8_A Inactivation-NO-after-potential D protein, KON-TI peptide; peptide binding protein; NMR {Drosophila melanogaster}
Probab=98.12 E-value=1.2e-06 Score=70.26 Aligned_cols=52 Identities=27% Similarity=0.362 Sum_probs=41.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCHH--HHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNGS--DLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~~--~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++|+++| |++||+|++|||++|.+.. +...++. .+++++.|+|.|..
T Consensus 31 ~V~~gspA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~--~~~~~v~l~v~R~~ 85 (106)
T 2la8_A 31 DLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFK--GANGKVSMEVTRPK 85 (106)
T ss_dssp ECCTTSCHHHHTTCCTTCEEEEESSCBCSSSCHHHHHHHHH--SCBSCEEEEEEECC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHh--CCCCeEEEEEEeCC
Confidence 567889999999 9999999999999998744 3344443 35678999999964
No 272
>1fc6_A Photosystem II D1 protease; D1 C-terminal processing protease, serine protease, serine- lysine catalytic DYAD, PDZ domain, photosynthesis; 1.80A {Scenedesmus obliquus} SCOP: b.36.1.3 c.14.1.2 PDB: 1fc9_A 1fc7_A 1fcf_A
Probab=98.11 E-value=7.8e-06 Score=80.49 Aligned_cols=63 Identities=16% Similarity=0.183 Sum_probs=53.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE---EEEEEEEee
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ---KEKIPVKLE 379 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~---~~~~~v~~~ 379 (385)
.+.+++|++++||++||+|++|||++|.++ .++.+++.. ++|++|+|+|.|+|+ .++++++..
T Consensus 105 ~v~~~spA~~aGl~~GD~I~~Ing~~v~~~~~~~~~~~l~~-~~g~~v~l~v~r~g~~~~~~~~~l~r~ 172 (388)
T 1fc6_A 105 TPAPGGPAEKAGARAGDVIVTVDGTAVKGMSLYDVSDLLQG-EADSQVEVVLHAPGAPSNTRTLQLTRQ 172 (388)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHCB-STTCEEEEEEEETTEEEEEEEEEEECB
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc-CCCCEEEEEEEeCCCCcceEEEEEEEc
Confidence 456789999999999999999999999986 788888875 689999999999998 667776643
No 273
>1wg6_A Hypothetical protein (riken cDNA 2810455B10); structural genomics, PDZ domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.36.1.1 PDB: 2koh_A 2k1z_A 2k20_A
Probab=98.11 E-value=1.3e-06 Score=72.46 Aligned_cols=55 Identities=15% Similarity=0.259 Sum_probs=47.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcC-----CCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQC-----KVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~-----~~g~~v~l~v~R~g~ 370 (385)
.+.++++|+++| |++||+|++|||+.+.+ ..++.++|... ++|++|+|+|.|+++
T Consensus 61 ~V~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~g~~~~~v~l~v~R~~~ 123 (127)
T 1wg6_A 61 SIIHGGAAFKDGRLRMNDQLIAVNGETLLGKSNHEAMETLRRSMSMEGNIRGMIQLVILRRSG 123 (127)
T ss_dssp ECCSSSSTHHHHTSCSCCBEEEETTEESTTSCHHHHHHHHHHHHHHHHHHTCEEEEEEEECSC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhhccccCCCCEEEEEEEeCCC
Confidence 567889999999 99999999999999987 55888888764 468999999999875
No 274
>1q3o_A Shank1; PDZ, GKAP, peptide binding protein; 1.80A {Rattus norvegicus} SCOP: b.36.1.1 PDB: 1q3p_A 3qjm_A 3qjn_A 3o5n_A*
Probab=98.11 E-value=3e-06 Score=68.02 Aligned_cols=52 Identities=21% Similarity=0.303 Sum_probs=45.3
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++.+||++||+|++|||++|.++ .++.+++.. .|+.+.|+|.|.+
T Consensus 51 ~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~~~~ 104 (109)
T 1q3o_A 51 SVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVT 104 (109)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEECTTCCHHHHHHHHHH--TTTEEEEEEEEEE
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCEEEEEEEECC
Confidence 456788999999999999999999999998 888888876 3889999998853
No 275
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=98.10 E-value=1.5e-06 Score=69.92 Aligned_cols=55 Identities=15% Similarity=0.152 Sum_probs=48.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCC--CCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCK--VGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~--~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||.|++|||+.+.+ ..++.++|.... .|.+++|++.|+++
T Consensus 47 ~v~~~s~A~~aG~l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~~r~~~~~~l~v~R~~~ 106 (109)
T 1wi4_A 47 EVIPGGDCYKDGRLKPGDQLVSINKESMIGVSFEEAKSIITRAKLRSESPWEIAFIRSGP 106 (109)
T ss_dssp EECTTSHHHHHCSCCTTCBEEEETTSCCTTCCHHHHHHHHHHSCCSSSSCEEEEEECCCC
T ss_pred EeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHccccCCCceEEEEEEeCCC
Confidence 466889999999 99999999999999997 789999998754 58999999999875
No 276
>2qt5_A Glutamate receptor-interacting protein 1; PDZ-peptide complex, PDZ tandem, alternative splicing, cell junction, cytoplasm; 2.30A {Rattus norvegicus}
Probab=98.10 E-value=2.3e-06 Score=76.14 Aligned_cols=56 Identities=18% Similarity=0.175 Sum_probs=49.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++.+| |++||+|++|||++|. +..++.+++.. +|+.+.|+|.|+++.++
T Consensus 141 ~v~~~s~A~~aG~l~~GD~I~~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 199 (200)
T 2qt5_A 141 CVRPGGPADREGTIKPGDRLLSVDGIRLLGTTHAEAMSILKQ--CGQEATLLIEYDVSVMD 199 (200)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHT--TCSEEEEEEEEEEEC--
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCccCC
Confidence 456788999999 9999999999999999 99999999986 79999999999987643
No 277
>1nf3_C PAR-6B; semi-CRIB motif, switch I and II, PDZ domain, GTPase binding domain, signaling protein; HET: GNP; 2.10A {Mus musculus} SCOP: b.36.1.1 PDB: 2lc6_A 1ry4_A 1x8s_A 2lc7_A 1rzx_A
Probab=98.09 E-value=1.9e-06 Score=71.42 Aligned_cols=53 Identities=19% Similarity=0.217 Sum_probs=46.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++|+.+| |++||+|++|||++| .+..++.+++.. .|+.+.|+|.|+++
T Consensus 71 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~r~~~ 126 (128)
T 1nf3_C 71 RLVPGGLAQSTGLLAVNDEVLEVNGIEVSGKSLDQVTDMMIA--NSRNLIITVRPANQ 126 (128)
T ss_dssp EECTTCHHHHHTCCCTTCEEEEETTEESTTCCHHHHHHHHHH--TTTSEEEEEECCCC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCc
Confidence 556889999999 999999999999999 778899998874 46779999999875
No 278
>2eei_A PDZ domain-containing protein 1; regulatory factor, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.08 E-value=3.5e-06 Score=67.12 Aligned_cols=54 Identities=13% Similarity=0.279 Sum_probs=45.1
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+||++||+|++|||++|.+ ..++...+.. .|+.+.++|.|++..
T Consensus 38 ~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~r~~~~ 93 (106)
T 2eei_A 38 DITPQGVAMRAGVLADDHLIEVNGENVEDASHEEVVEKVKK--SGSRVMFLLVDKETD 93 (106)
T ss_dssp CCCTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHHH--HCSEEEEEECCTTTS
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEcCchh
Confidence 56678899999999999999999999985 4677776654 488999999997754
No 279
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=98.05 E-value=6.3e-06 Score=62.89 Aligned_cols=50 Identities=22% Similarity=0.369 Sum_probs=43.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLR 367 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R 367 (385)
.+..++||+++||++||+|++|||+.+.. .+++.++|+ +.|++|+|+|+.
T Consensus 29 ~v~~gspA~~aGl~~GD~Il~VNG~~v~~~~~~evv~llr--~~g~~V~L~v~p 80 (82)
T 1r6j_A 29 SIVKDSSAARNGLLTEHNICEINGQNVIGLKDSQIADILS--TSGTVVTITIMP 80 (82)
T ss_dssp EECTTSHHHHHTCCSSEEEEEETTEECTTCCHHHHHHHHH--HSCSEEEEEEEE
T ss_pred EecCCCHHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHh--cCCCEEEEEEEe
Confidence 45688999999999999999999999974 567888887 479999999864
No 280
>1n7t_A 99-MER peptide of densin-180-like protein; PDZ domain, C-terminal peptide complex, high affnity ligand, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2h3l_A
Probab=98.05 E-value=3.2e-06 Score=67.03 Aligned_cols=51 Identities=20% Similarity=0.191 Sum_probs=42.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++. ||++||+|++|||++|.+ ..++...+. +.|++++|+|.|+.
T Consensus 49 ~V~~~spA~~-gL~~GD~I~~vng~~v~~~~~~~~~~~~~--~~g~~v~l~v~R~~ 101 (103)
T 1n7t_A 49 RVQPEGPASK-LLQPGDKIIQANGYSFINIEHGQAVSLLK--TFQNTVELIIVREV 101 (103)
T ss_dssp CBSSSSTTSS-SCCTTCEEEEETTEECSSCCHHHHHHHHH--HCCSEEEEEEECCC
T ss_pred EECCCCchHH-CCCCCCEEEEECCEECCCCCHHHHHHHhh--cCCCeEEEEEEecC
Confidence 5667889999 999999999999999987 556666665 46899999999974
No 281
>2daz_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.05 E-value=1.9e-06 Score=70.91 Aligned_cols=54 Identities=15% Similarity=0.257 Sum_probs=44.8
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+.+| |++||+|++|||++|.+ ..++..++.. .++.+.|+|.|+++.
T Consensus 57 ~V~~~spA~~aG~L~~GD~Il~Ing~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~~ 113 (124)
T 2daz_A 57 GINPEGPAAADGRMRIGDELLEINNQILYGRSHQNASAIIKT--APSKVKLVFIRNEDA 113 (124)
T ss_dssp EECTTSHHHHHTCCCTTCEECEESSCBCTTSCHHHHHHHHHH--SCSEEEEEEEECTTH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCCCc
Confidence 567889999999 99999999999999976 5566566654 467999999998864
No 282
>3gsl_A Disks large homolog 4; PDZ domain, tandem, PSD-95, DLG4, SAP-90, GLUR6, cell juncti membrane, lipoprotein, membrane, palmitate, phosphoprotein; 2.05A {Rattus norvegicus} PDB: 3zrt_A 2ka9_A
Probab=98.04 E-value=3.3e-06 Score=74.40 Aligned_cols=56 Identities=21% Similarity=0.252 Sum_probs=49.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++.+| |++||+|++|||++|.+ +.++.+++.. .++.+.|+|.|+++..+
T Consensus 136 ~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 194 (196)
T 3gsl_A 136 KIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAET 194 (196)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECSSCBHHHHHHHHHS--CCEEEEEEEEEESCCCE
T ss_pred EECCCChHHhcCCCCCCCEEEEECCCcCCCCCHHHHHHHHHc--CCCeEEEEEeCCCCccc
Confidence 566888999999 99999999999999999 8999998865 48999999999887643
No 283
>4e34_A Golgi-associated PDZ and coiled-coil motif-contai protein; PDZ-peptide complex, protein transport-inhibitor complex; 1.40A {Homo sapiens} PDB: 4e35_A
Probab=98.03 E-value=1.1e-05 Score=61.79 Aligned_cols=50 Identities=28% Similarity=0.379 Sum_probs=41.6
Q ss_pred cccccccccc-cCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEE
Q 016647 316 GLLSTKRDAY-GRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLR 367 (385)
Q Consensus 316 ~v~~~~~a~~-~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R 367 (385)
.+.++++++. +||++||+|++|||+++.+ ..++..++.. +++++.|+|.+
T Consensus 34 ~V~~gspA~~~agl~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~~ 86 (87)
T 4e34_A 34 EIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVVY 86 (87)
T ss_dssp EECTTSHHHHHSCCCTTEEEEEETTEECTTCCHHHHHHHHHH--CCSEEEEEEEE
T ss_pred EECCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEE
Confidence 5678899998 7999999999999999964 5778887764 57888888764
No 284
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=98.03 E-value=4.6e-06 Score=64.83 Aligned_cols=54 Identities=19% Similarity=0.374 Sum_probs=45.1
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+| |++||+|++|||+++ .+..++.+++... ++.+.|+|.|..+.
T Consensus 34 ~v~~gspA~~aG~L~~GD~I~~ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~~~~ 90 (93)
T 3o46_A 34 RIMRGGAADRSGLIHVGDELREVNGIPVEDKRPEEIIQILAQS--QGAITFKIIPGSKE 90 (93)
T ss_dssp EECTTSHHHHHTCCCTTCEEEEETTEESTTSCHHHHHHHHHHC--CEEEEEEEECC---
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCeEEEEEEeCCCC
Confidence 567889999999 999999999999999 7899999999774 35999999987553
No 285
>2dc2_A GOPC, golgi associated PDZ and coiled-coil motif containing isoform B; GOPC PDZ domain, structural protein; NMR {Homo sapiens}
Probab=98.03 E-value=1.1e-05 Score=63.97 Aligned_cols=54 Identities=26% Similarity=0.326 Sum_probs=44.2
Q ss_pred cccccccccc-cCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAY-GRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~-~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.+++++++ +||++||+|++|||+++.+ ..++.+++.. .+++++|++.|....
T Consensus 41 ~V~~~s~A~~a~gL~~GD~Il~Ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~~~~~~ 97 (103)
T 2dc2_A 41 EIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVVYVALE 97 (103)
T ss_dssp EECTTSHHHHHTCCCSSEEEEEETTEESTTSCHHHHHHHHHH--CCSEEEEEEEECC--
T ss_pred EECCCCHHHHhCCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCcEEEEEEecCCc
Confidence 5678889999 5999999999999999965 7788888875 457999999997543
No 286
>1x5n_A Harmonin; PDZ domain, usher syndrome 1C protein, autoimmune enteropathy-related antigen AIE-75 ,antigen NY-CO-38/NY-CO- 37, PDZ-73 protein; NMR {Homo sapiens} SCOP: b.36.1.1 PDB: 2kbs_A
Probab=98.00 E-value=1.7e-07 Score=76.02 Aligned_cols=59 Identities=19% Similarity=0.221 Sum_probs=46.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHH--HHHHHhcCCCCCEEEEEEEEC-CEEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSD--LYRILDQCKVGDEVIVEVLRG-DQKEKIPVK 377 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~--l~~~l~~~~~g~~v~l~v~R~-g~~~~~~v~ 377 (385)
.+.++++++.+||++||+|++|||++|.++.+ +..++.. ++.+.|+|+|+ |+.+++.++
T Consensus 47 ~V~~~s~A~~aGL~~GD~Il~vng~~v~~~~~~~~~~~~~~---~~~v~l~v~r~~g~~~~~~~~ 108 (114)
T 1x5n_A 47 HVKPGSLSAEVGLEIGDQIVEVNGVDFSNLDHKEAVNVLKS---SRSLTISIVAAAGRELFMTDR 108 (114)
T ss_dssp EECTTSTTTTTTCCTTCEEEEETTEETTSCCTTHHHHHHHH---CSSEEEEECSSTTTHHHHSSC
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhc---CCeEEEEEEcCCCCceEEEec
Confidence 45678899999999999999999999998854 6666654 35799999999 876554443
No 287
>1wf8_A Neurabin-I; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=98.00 E-value=2.1e-06 Score=68.72 Aligned_cols=53 Identities=13% Similarity=0.105 Sum_probs=44.8
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|.+ ..++..++.. .|+.+.|+|.|++.
T Consensus 46 ~V~~~spA~~aG~L~~GD~I~~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 101 (107)
T 1wf8_A 46 TVTEGGAAQRDGRIQVNDQIVEVDGISLVGVTQNFAATVLRN--TKGNVRFVIGREKP 101 (107)
T ss_dssp EECTTCHHHHHCSSCTTCBEEEETTEECBSCCHHHHHHHHHH--CCSEEEEEEEEECC
T ss_pred EeCCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHhc--CCCeEEEEEEeCCC
Confidence 466889999999 99999999999999985 5566666665 58999999999764
No 288
>2ehr_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=98.00 E-value=5.5e-06 Score=67.29 Aligned_cols=53 Identities=23% Similarity=0.283 Sum_probs=44.5
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.+ ..++..++.. .|+.+.|+|.|.++
T Consensus 56 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~--~g~~v~l~v~r~~~ 111 (117)
T 2ehr_A 56 QVLEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKN--AGNPVVFIVQSLSS 111 (117)
T ss_dssp EECSSSTTTSSCSCCTTCEEEEESSCBCTTCCHHHHHHHHHT--SCSSEEEEECCBSC
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 567889999999 99999999999999977 5566666654 68999999998654
No 289
>3e17_A Tight junction protein ZO-2; domain swapping, alternative promoter usage, alternative splicing, cell junction, cell membrane, disease mutation; 1.75A {Homo sapiens}
Probab=97.98 E-value=1.5e-05 Score=61.46 Aligned_cols=52 Identities=23% Similarity=0.291 Sum_probs=44.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++++| |++||+|++|||+++ .+.+++.+++... ++++.|++.+.-
T Consensus 27 ~V~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~i~~~--~~~v~L~v~~~~ 81 (88)
T 3e17_A 27 EMTRTGLATKDGNLHEGDIILKINGTVTENMSLTDARKLIEKS--RGKLQLVVLRDL 81 (88)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHT--TTEEEEEECCC-
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEeCCC
Confidence 567889999999 999999999999999 7888999999873 568999887753
No 290
>2cs5_A Tyrosine-protein phosphatase, non-receptor type 4; PDZ domain, ptpase, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.97 E-value=2.2e-06 Score=69.91 Aligned_cols=60 Identities=13% Similarity=0.205 Sum_probs=46.8
Q ss_pred ccccccccccc--CCCCCcEEEEECCEEeCC--HHHHHHHHhcCCC--CCEEEEEEEECCEEEEEE
Q 016647 316 GLLSTKRDAYG--RLILGDIITSVNGKKVSN--GSDLYRILDQCKV--GDEVIVEVLRGDQKEKIP 375 (385)
Q Consensus 316 ~v~~~~~a~~~--gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~--g~~v~l~v~R~g~~~~~~ 375 (385)
.+.++++|+++ ||++||+|++|||++|.+ ..++.+++..... ++.+.|+|.|+......+
T Consensus 47 ~V~~~spA~~a~gGL~~GD~Il~ing~~v~~~~~~~~~~~~~~~~~~~~~~v~l~v~R~~~~~~~~ 112 (119)
T 2cs5_A 47 RVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPNAVYDVVE 112 (119)
T ss_dssp EECSSSTTTSSSSCCCTTCEEEEETTBCTTSSCHHHHHHHHHHHHHCCSSCEEEEEECCCCCCCCC
T ss_pred EECCCCHHHHhhcCCCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCCEEEEEEEcccccCccc
Confidence 56788999998 999999999999999986 5677777765321 358999999987654433
No 291
>1ufx_A KIAA1526 protein; PDZ domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.96 E-value=5.8e-06 Score=65.83 Aligned_cols=55 Identities=20% Similarity=0.185 Sum_probs=46.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhc---CCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQ---CKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~---~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||.|++|||+++.+ ++++.++|.. ...++.++++|.|.++
T Consensus 38 ~v~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~~~~~i~l~v~r~~~ 98 (103)
T 1ufx_A 38 TIQRGGSAHNCGQLKVGHVILEVNGLTLRGKEHREAARIIAEAFKTKDRDYIDFLVTEFNS 98 (103)
T ss_dssp EECTTSHHHHHCSSCTTCBCCEETTEECTTCBHHHHHHHHHHHHHCSSCSEEEEEECCCCC
T ss_pred EeCCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHHhcccCCCCeEEEEEEEccc
Confidence 567889999999 99999999999999976 8888887765 2468899999999764
No 292
>1um7_A Synapse-associated protein 102; PDZ, discs large homolog 3, DLG3-human presynaptic protein, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.96 E-value=4.3e-06 Score=67.33 Aligned_cols=53 Identities=25% Similarity=0.268 Sum_probs=44.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++.+| |++||+|++|||++|.++ .++..++. +.|+.+.|+|.|+++
T Consensus 45 ~V~~~s~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~~~--~~~~~v~l~v~r~~~ 100 (113)
T 1um7_A 45 FILAGGPADLSGELRRGDRILSVNGVNLRNATHEQAAAALK--RAGQSVTIVAQYRPE 100 (113)
T ss_dssp CBCSSSHHHHTTCCCTTCEEEEESSCBCTTCCHHHHHHHHH--SCCSEEEEEEECCHH
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHH--hCCCcEEEEEEECcc
Confidence 556788999999 999999999999999987 56666665 368999999999764
No 293
>3hpk_A Protein interacting with PRKCA 1; oxidized, PDZ domain, kinase, protein binding; 2.20A {Rattus norvegicus} PDB: 3hpm_A
Probab=97.94 E-value=1.6e-05 Score=65.39 Aligned_cols=50 Identities=22% Similarity=0.411 Sum_probs=44.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLR 367 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R 367 (385)
.+.++++|+.+| |++||+|++|||++|. +..++.+++.. .++.++++|.|
T Consensus 51 ~v~~gspA~~aG~L~~GD~Il~ing~~v~~~~~~~~~~~l~~--~~~~v~l~v~r 103 (125)
T 3hpk_A 51 QVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQE--VKGEVTIHYNK 103 (125)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHH--SCSEEEEEEEE
T ss_pred EeCCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEE
Confidence 567889999999 9999999999999998 67888888876 45679999998
No 294
>3nfk_A Tyrosine-protein phosphatase non-receptor type 4; PDZ-PDZ-binding site complex, protein binding; 1.43A {Homo sapiens} SCOP: b.36.1.1 PDB: 3nfl_A 2vph_A
Probab=97.94 E-value=6.2e-06 Score=65.79 Aligned_cols=53 Identities=13% Similarity=0.192 Sum_probs=43.0
Q ss_pred cccccccccccC--CCCCcEEEEECCEEeCCH--HHHHHHHhcCCC--CCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGR--LILGDIITSVNGKKVSNG--SDLYRILDQCKV--GDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~g--l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~--g~~v~l~v~R~ 368 (385)
.+.++++++.+| |++||+|++|||++|.++ .++..++..... +..+.|+|.|+
T Consensus 49 ~V~~~spA~~aG~rL~~GD~Il~ing~~v~~~~~~~~~~~i~~~~~~~~~~v~l~v~r~ 107 (107)
T 3nfk_A 49 RVAPGTPADLCVPRLNEGDQVVLINGRDIAEHTHDQVVLFIKASCERHSGELMLLVRPN 107 (107)
T ss_dssp EECTTSHHHHSSSCCCTTCEEEEETTEECTTCCHHHHHHHHHCGGGSBTTBEEEEEECC
T ss_pred EECCCCchHHcCCccCCCCEEEEECCEECCCCCHHHHHHHHHhccccCCcEEEEEEEcC
Confidence 567889999999 999999999999999965 567777765322 45899999885
No 295
>1p1d_A PDZ45, glutamate receptor interacting protein; PDZ domain, tandem repeats, scaffold protein, protein binding; NMR {Rattus norvegicus} SCOP: b.36.1.1 b.36.1.1 PDB: 1p1e_A 1x5r_A
Probab=97.93 E-value=6.5e-06 Score=73.03 Aligned_cols=52 Identities=21% Similarity=0.354 Sum_probs=47.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++.+| |++||+|++|||++|.+ +.++.+++... |+.+.|+|+|++
T Consensus 141 ~V~~~s~A~~aG~l~~GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v~R~~ 195 (196)
T 1p1d_A 141 DIKKGSVAHRTGTLELGDKLLAIDNIRLDSCSMEDAVQILQQC--EDLVKLKIRKDE 195 (196)
T ss_dssp ECCSSSHHHHTSCCCTTCEEEEETTEEGGGCCHHHHHHHHHHC--TTCEEEEEECCC
T ss_pred EECCCCcHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC--CCEEEEEEEeCC
Confidence 566788999999 99999999999999999 99999999875 899999999986
No 296
>1uhp_A Hypothetical protein KIAA1095; PDZ domain, semaphorin cytoplasmic domain associated protein, structural genomics; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.93 E-value=4.7e-06 Score=66.58 Aligned_cols=53 Identities=23% Similarity=0.354 Sum_probs=43.8
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++ ||++||+|++|||++|.+ ..++..++.. .|+++.|+|.|++.
T Consensus 47 ~V~~~spA~~aggL~~GD~Il~vng~~v~~~~~~~~~~~~~~--~~~~v~l~v~R~~~ 102 (107)
T 1uhp_A 47 KIVDSGPAAKEGGLQIHDRIIEVNGRDLSRATHDQAVEAFKT--AKEPIVVQVLRRTS 102 (107)
T ss_dssp EECSSSHHHHTTCCCSSCEEEEETTEECTTCCHHHHHHHHHH--CCSSEEEEEEECCS
T ss_pred EeCCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCcEEEEEEeCCC
Confidence 45678899998 999999999999999976 4566666654 57899999999753
No 297
>3l4f_D SH3 and multiple ankyrin repeat domains protein 1; coiled-coil, PDZ, guanine-nucleotide releasing factor, phosphoprotein, SH3 domain; 2.80A {Rattus norvegicus}
Probab=97.93 E-value=1.1e-05 Score=67.30 Aligned_cols=54 Identities=20% Similarity=0.316 Sum_probs=45.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+.+||++||+|++|||++|.+ ..++.+++.. .|+.+.|+|.|.++.
T Consensus 71 ~V~~gspA~~aGL~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~~~~~~ 126 (132)
T 3l4f_D 71 SVDEGGVAWRAGLRMGDFLIEVNGQNVVKVGHRQVVNMIRQ--GGNTLMVKVVMVTRH 126 (132)
T ss_dssp EECTTSGGGGGTCCTTCEEEEESSSBCTTSCHHHHHHHHHH--TTTEEEEEEECCCC-
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEECCCC
Confidence 45678999999999999999999999995 6678787765 688999999997654
No 298
>2gzv_A PRKCA-binding protein; protein kinase C, PDZ domain, structural genomics, structura genomics consortium, SGC, signaling protein; 1.12A {Homo sapiens} PDB: 2pku_A
Probab=97.91 E-value=1.1e-05 Score=65.46 Aligned_cols=51 Identities=20% Similarity=0.352 Sum_probs=43.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++++.+| |++||+|++|||++| .+..++.+++... ++.++|+|++.
T Consensus 56 ~V~~gspA~~aG~L~~GD~I~~Ing~~v~~~~~~~~~~~l~~~--~~~v~l~v~~~ 109 (114)
T 2gzv_A 56 QVFDNTPAALDGTVAAGDEITGVNGRSIKGKTKVEVAKMIQEV--KGEVTIHYNKL 109 (114)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTCCHHHHHHHHHHC--CSEEEEEEECC
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHcC--CCeEEEEEEec
Confidence 456888999999 999999999999999 8899999988763 45688888663
No 299
>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A
Probab=97.89 E-value=8.4e-06 Score=80.32 Aligned_cols=55 Identities=25% Similarity=0.276 Sum_probs=49.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.|.++++|+.+||++||+|++|||++|.+ ..++..++...++|++++|+|.|+++
T Consensus 37 ~V~~gspA~~aGL~~GD~Il~VnG~~v~~~~~~e~~~~l~~~~~g~~v~l~v~r~~~ 93 (391)
T 3tsz_A 37 GVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 93 (391)
T ss_dssp EECTTCHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhhcCCCeEEEEEeeCCc
Confidence 56789999999999999999999999986 88999999877799999999999864
No 300
>1uju_A Scribble; PDZ domain, cellular signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI, signaling protein; NMR {Homo sapiens} SCOP: b.36.1.1
Probab=97.89 E-value=2.2e-06 Score=69.06 Aligned_cols=53 Identities=23% Similarity=0.253 Sum_probs=45.9
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.+.++++++++| |++||+|++|||++|. +..++..++.. .|+.++|+|.|+..
T Consensus 50 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~l~~--~g~~v~l~v~r~~~ 105 (111)
T 1uju_A 50 KVSPTGAAGRDGRLRVGLRLLEVNQQSLLGLTHGEAVQLLRS--VGDTLTVLVCDGFE 105 (111)
T ss_dssp EECTTSHHHHHSSCCTTCBCCBBSSCBCTTSCHHHHHHHHSS--CSSEEEECCCCCCC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEECCC
Confidence 456788999999 9999999999999999 67888888765 68999999999754
No 301
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.88 E-value=1e-05 Score=72.06 Aligned_cols=62 Identities=23% Similarity=0.304 Sum_probs=48.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC----HHHHHHHHhcCCCCCE-EEEEEEECCEEE--EEEEEee
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN----GSDLYRILDQCKVGDE-VIVEVLRGDQKE--KIPVKLE 379 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s----~~~l~~~l~~~~~g~~-v~l~v~R~g~~~--~~~v~~~ 379 (385)
.+.++++++++| ||+||+|++|||++|.+ ..++..++.. .++. +.|+|+|+++.. .+++++.
T Consensus 51 ~V~~~spA~~aG~L~~GD~Il~vng~~v~~~~~~~~~~~~~~~~--~~~~~v~l~v~R~~~~~~~~~~v~l~ 120 (206)
T 3r0h_A 51 HVYPEGQVAADKRLKIFDHICDINGTPIHVGSMTTLKVHQLFHT--TYEKAVTLTVFRADPPELEKFNVDLM 120 (206)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECCGGGSCHHHHHHHHHS--CCSSEEEEEEECCSSCCEEEEEEEEE
T ss_pred EECCCChHHhcCCCCCCCEEEEECCEEcCCCccCHHHHHHHHHh--cCCCceEEEEEecccCCCcEEEEEEe
Confidence 456788999998 99999999999999998 5666666654 4455 999999988654 4444443
No 302
>2krg_A Na(+)/H(+) exchange regulatory cofactor NHE-RF1; acetylation, cell projection, disease mutation, membrane, phosphoprotein, polymorphism; NMR {Homo sapiens}
Probab=97.88 E-value=2.6e-06 Score=77.10 Aligned_cols=55 Identities=22% Similarity=0.215 Sum_probs=48.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEE-EEEEEECCEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEV-IVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v-~l~v~R~g~~~ 372 (385)
.|..+++++.+||++||+|++|||++|. ++.++.+++... |+.+ .++|.|+|+.+
T Consensus 39 ~V~~gSpA~~aGL~~GD~Il~VNG~~V~~~s~~dl~~~l~~~--g~~v~~l~V~R~g~~~ 96 (216)
T 2krg_A 39 SVDPDSPAEASGLRAQDRIVEVNGVCMEGKQHGDVVSAIRAG--GDETKLLVVDRETDEF 96 (216)
T ss_dssp EECTTSHHHHHTCCTTCBCCEETTEECTTCCTHHHHHHHHHH--CSEEEEEECCHHHHHH
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhc--CCeEEEEEEEECCEEE
Confidence 4567889999999999999999999999 999999988764 8899 99999988765
No 303
>2csj_A TJP2 protein; PDZ domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: b.36.1.1
Probab=97.88 E-value=1.6e-06 Score=70.63 Aligned_cols=55 Identities=22% Similarity=0.200 Sum_probs=44.2
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++ +||++||+|++|||++|.++ .++..++.. .|+.+.|+|.|+++...
T Consensus 52 ~V~~~spA~-~gL~~GD~I~~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~v~R~~~~~~ 108 (117)
T 2csj_A 52 DVLPGGPAD-GLLQENDRVVMVNGTPMEDVLHSFAVQQLRK--SGKIAAIVVKRPRKVQV 108 (117)
T ss_dssp EECTTSSHH-HHBCTTCEEEEESSCBCBTCCHHHHHHHHHH--SCSEEEEEEEEEEECCC
T ss_pred EECCCCccc-ccCCCCCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEEEEECCcccc
Confidence 456777775 99999999999999999875 556666665 68999999999766543
No 304
>3kzd_A TIAM-1, T-lymphoma invasion and metastasis-inducing prote; PDZ, cell junction, cell adhesion, signaling protein, nucleotide exchange factor; 1.30A {Homo sapiens} PDB: 3kze_A
Probab=97.88 E-value=1.8e-05 Score=61.93 Aligned_cols=47 Identities=23% Similarity=0.176 Sum_probs=39.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVL 366 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~ 366 (385)
.+.++++|+++||++||+|++|||++|.+ ++++.+++.+ ..++++|.
T Consensus 41 ~V~~~spA~~aGL~~GD~Il~vng~~v~~~~~~~l~~~l~~----~~l~ltV~ 89 (94)
T 3kzd_A 41 SVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ----PSLGLLVR 89 (94)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTEEGGGCCHHHHHHHHHS----SEEEEEEE
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHhC----CeEEEEEE
Confidence 45688999999999999999999999994 6899998864 34666654
No 305
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=97.88 E-value=1e-05 Score=64.84 Aligned_cols=52 Identities=23% Similarity=0.241 Sum_probs=44.7
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++|+++| |++||+|++|||+++.+ ..++.+++... ++++|.|+|.|.
T Consensus 50 ~v~~~spA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~v~R~ 104 (108)
T 2d92_A 50 SLVADGVAERSGGLLPGDRLVSVNEYCLDNTSLAEAVEILKAV-PPGLVHLGICSG 104 (108)
T ss_dssp EECTTCHHHHHTCCCTTCEEEEESSCBCTTCCHHHHHHHHHHS-CSEEEEEEEECC
T ss_pred EECCCCHHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCCeEEEEEEcC
Confidence 456788999999 99999999999999965 77888888774 466899999885
No 306
>2d8i_A T-cell lymphoma invasion and metastasis 1 variant; PDZ domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.87 E-value=8.8e-06 Score=66.09 Aligned_cols=50 Identities=22% Similarity=0.133 Sum_probs=43.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++|+++||++||+|++|||++|.+ +.++.+++.. +.+.|+|.|..
T Consensus 50 ~V~~~spA~~aGL~~GD~Il~Ing~~v~~~~~~~~~~~l~~----~~v~l~v~R~p 101 (114)
T 2d8i_A 50 SVKETGLASKKGLKAGDEILEINNRAADALNSSMLKDFLSQ----PSLGLLVRTYP 101 (114)
T ss_dssp ECCTTSSHHHHTCCTTCCEEEESSCBGGGCCHHHHHHHHTS----SEEEEEEEECC
T ss_pred EeCCCCHHHHcCCCCCCEEEEECCEECCCcCHHHHHHHHhC----CcEEEEEEECC
Confidence 56688999999999999999999999998 4688888763 48999999964
No 307
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=97.85 E-value=9.2e-06 Score=80.00 Aligned_cols=62 Identities=19% Similarity=0.263 Sum_probs=51.6
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEEEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEKIPVK 377 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~ 377 (385)
.+.++++++++| |++||+|++|||+++.++ .++.+++...++++.++|+|.|+++..++.++
T Consensus 238 ~V~~gspA~~aG~L~~GD~Il~VnG~~v~~~~~~~~~~~l~~~~~~~~v~l~v~r~~~~~~v~l~ 302 (388)
T 3suz_A 238 NMMNGGPAARSGKLSIGDQIMSINGTSLVGLPLATCQGIIKGLKNQTQVKLNIVSCPPVTTVLIK 302 (388)
T ss_dssp CCCCSSHHHHTCCCCTTCEEEEETTEECSSCCSTTHHHHTTTCTTCSCEEEEEEECCSCC-----
T ss_pred eeCCCCHHHHcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhccCCCccccccccccccceeeEe
Confidence 677899999999 999999999999999988 68888888877888999999999887666653
No 308
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=97.84 E-value=1.3e-05 Score=66.57 Aligned_cols=55 Identities=13% Similarity=0.215 Sum_probs=46.8
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++|+++ ||++||+|++|||+.+.+ ..++.+++... .+..+.|+|.|++..
T Consensus 63 ~V~~gs~A~~aggL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~-~~~~v~l~v~r~~~~ 120 (130)
T 1i16_A 63 RIFKGAASEQSETVQPGDEILQLGGTAMQGLTRFEAWNIIKAL-PDGPVTIVIRRKSLQ 120 (130)
T ss_dssp EECSSCCCSSSCCCCTTCCEEECSSCBGGGSCHHHHHHHHHTS-CSSEEEEEEEEESSC
T ss_pred EECCCCHHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHhC-CCceEEEEEEeCCCC
Confidence 56788999998 999999999999999997 67888888764 578899999997543
No 309
>2z17_A Pleckstrin homology SEC7 and coiled-coil domains- binding protein; PDZ domain, cytoplasm, membrane, polymorphism, protein binding; 2.70A {Homo sapiens}
Probab=97.83 E-value=7.7e-06 Score=64.95 Aligned_cols=48 Identities=15% Similarity=0.324 Sum_probs=41.9
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEV 365 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v 365 (385)
.+.++++++.+||++||+|++|||++|. +..++.+++... +++++|+|
T Consensus 54 ~V~~~spA~~aGl~~GD~I~~vng~~v~~~~~~~~~~~l~~~--~~~v~l~v 103 (104)
T 2z17_A 54 KIQEDSPAHCAGLQAGDVLANINGVSTEGFTYKQVVDLIRSS--GNLLTIET 103 (104)
T ss_dssp EECTTSHHHHHTCCTTCBCCEETTEECTTCCHHHHHHHHHHT--TTEEEEEC
T ss_pred EECCCChHHHcCCCCCCEEEEECCEEcCCCCHHHHHHHHHhC--CCcEEEEE
Confidence 5568889999999999999999999999 889999999875 44888765
No 310
>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}
Probab=97.81 E-value=1.3e-05 Score=80.44 Aligned_cols=55 Identities=25% Similarity=0.276 Sum_probs=50.5
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.|.++++|+.+||++||+|++|||+.|.+ ..++..+|...++|+.|+|+|.|+|+
T Consensus 29 ~V~~gspA~~aGL~~GD~Il~VNG~~v~~~t~~e~~~~L~~~~~g~~v~L~V~r~g~ 85 (468)
T 3shw_A 29 GVLEDSPAAKEGLEEGDQILRVNNVDFTNIIREEAVLFLLDLPKGEEVTILAQKKKD 85 (468)
T ss_dssp EECSSSHHHHTTCCTTEEEEEETTEECTTCCHHHHHHHHHHSCTTSEEEEEEEECHH
T ss_pred EECCCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHhcCCCCEEEEEEEECCc
Confidence 56788999999999999999999999988 88999999988899999999999764
No 311
>3egg_C Spinophilin; PP1, serine/threonine phosphatase, post synapti density, glutametergic receptors, carbohydrate metabolism, cycle, cell division; HET: MES; 1.85A {Rattus norvegicus} PDB: 3egh_C* 3hvq_C 2fn5_A
Probab=97.78 E-value=2.6e-05 Score=67.82 Aligned_cols=51 Identities=14% Similarity=0.146 Sum_probs=44.4
Q ss_pred cccccccccccC-CCCCcEEEEECCEEe--CCHHHHHHHHhcCCCCCEEEEEEEEC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKV--SNGSDLYRILDQCKVGDEVIVEVLRG 368 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i--~s~~~l~~~l~~~~~g~~v~l~v~R~ 368 (385)
.+.++++|+++| |++||+|++|||+.| .+..++.+++.. .|+.|.|+|.|+
T Consensus 117 ~V~~gspA~~aG~L~~GD~Il~VNG~~v~~~~~~~~~~~l~~--~g~~v~L~V~R~ 170 (170)
T 3egg_C 117 TVTEGGAAHRDGRIQVNDLLVEVDGTSLVGVTQSFAASVLRN--TKGRVRFMIGRE 170 (170)
T ss_dssp EECTTSHHHHHCCCCTTCEEEEETTEECTTBCHHHHHHHHHH--CCSEEEEEEEEC
T ss_pred EECCCChHHHCCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCEEEEEEEeC
Confidence 567889999999 999999999999999 456788888876 688999999995
No 312
>3k50_A Putative S41 protease; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.00A {Bacteroides fragilis nctc 9343}
Probab=97.73 E-value=1.1e-05 Score=79.79 Aligned_cols=53 Identities=13% Similarity=0.122 Sum_probs=45.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.+++||+++|||+||+|++|||++|.++. +.+++.. +|++|+|++.|+|+.
T Consensus 96 ~V~~gsPA~~AGL~~GD~I~~InG~~v~~~~-~~~~l~~--~g~~v~l~v~R~g~~ 148 (403)
T 3k50_A 96 YVVPGSPAEEAGLQRGHWIMMMNGDYITKKV-ESELLQG--STRQLQIGVYKEVVG 148 (403)
T ss_dssp EECTTSHHHHTTCCTTCEEEEETTBCBCTTT-GGGGTSC--SCEEEEEEEEEEEC-
T ss_pred EeCCCChHHHcCCCCCCEEEEECCEEccchh-HHHHhhC--CCCEEEEEEEeCCcc
Confidence 5678999999999999999999999999885 6666654 899999999998764
No 313
>1ky9_A Protease DO, DEGP, HTRA; protein quality control, serine protease, trypsin, chaperone, PDZ, ATP-independent, temperature-regulated, periplasm; 2.80A {Escherichia coli} SCOP: b.36.1.4 b.47.1.1 PDB: 3ou0_A 4a8d_A 3otp_A 3mh7_A 3mh4_A 3mh5_A* 3mh6_A* 3cs0_A 2zle_A
Probab=97.62 E-value=7.6e-06 Score=82.09 Aligned_cols=59 Identities=24% Similarity=0.300 Sum_probs=0.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPV 376 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v 376 (385)
.+.++++++++||++||+|++|||++|.++.++.+++... ++ .+.|+|.|+|+.+++.+
T Consensus 389 ~V~~gspA~~aGL~~GDiI~~vng~~v~~~~~l~~~l~~~-~~-~v~l~v~R~g~~~~~~l 447 (448)
T 1ky9_A 389 NVKTGTPAAQIGLKKGDVIIGANQQAVKNIAELRKVLDSK-PS-VLALNIQRGDSTIYLLM 447 (448)
T ss_dssp -------------------------------------------------------------
T ss_pred EecCCCHHHHcCCCCCCEEEEECCEECCCHHHHHHHHHcC-CC-eEEEEEEECCEEEEEEe
Confidence 5667889999999999999999999999999999998763 44 89999999999877665
No 314
>1z87_A Alpha-1-syntrophin; protein binding; NMR {Mus musculus}
Probab=97.61 E-value=3.5e-05 Score=71.73 Aligned_cols=53 Identities=28% Similarity=0.428 Sum_probs=45.4
Q ss_pred cccccccccc-cCCCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCE
Q 016647 316 GLLSTKRDAY-GRLILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQ 370 (385)
Q Consensus 316 ~v~~~~~a~~-~gl~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~ 370 (385)
.|.+++++++ +||++||+|++|||++|.++ .++..++.. .|++|+|+|.|.++
T Consensus 109 ~V~~gspA~~~aGL~~GD~Il~VNG~~v~~~t~~e~v~~l~~--~g~~V~L~V~R~~~ 164 (263)
T 1z87_A 109 KIFKGLAADQTEALFVGDAILSVNGEDLSSATHDEAVQALKK--TGKEVVLEVKYMKE 164 (263)
T ss_dssp ECCTTSHHHHCTTCCSSCEEEEESSCBCTTSCHHHHHHHHHH--CCSCCCEEEECCSS
T ss_pred EECCCCHHHHhCCCCCCCEEEEECCEECCCcCHHHHHHHHhc--CCCeEEEEEEeCcc
Confidence 5678889998 79999999999999999984 677777776 47889999999765
No 315
>3r0h_A INAD, inactivation-NO-after-potential D protein; protein-protein complex, PDZ domain, peptide binding protein; 2.60A {Drosophila melanogaster}
Probab=97.55 E-value=6e-05 Score=67.03 Aligned_cols=52 Identities=27% Similarity=0.362 Sum_probs=44.0
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++.+| |++||+|++|||++|.++ .++.+++.. .++.+.|+|.|..
T Consensus 142 ~V~~gs~A~~aG~L~~GD~Il~VNg~~v~~~~~~~~~~~l~~--~~~~v~L~V~R~~ 196 (206)
T 3r0h_A 142 DLIQGQYPEIDSKLQRGDIITKFNGDALEGLPFQVCYALFKG--ANGKVSMEVTRPK 196 (206)
T ss_dssp EECTTSCHHHHHHCCTTCEEEEETTEECTTCCHHHHHHHHHT--CCSEEEEEEEEEC
T ss_pred EECCCChHHHcCCCCCCCEEEEECCEECCCCCHHHHHHHHHc--CCCeEEEEEEeCC
Confidence 566788999998 999999999999999965 677777764 5789999999953
No 316
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=97.52 E-value=0.00025 Score=55.34 Aligned_cols=54 Identities=17% Similarity=0.226 Sum_probs=45.2
Q ss_pred ccccccccccc-CCCCCcEEEEECCEEeCC--HHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYG-RLILGDIITSVNGKKVSN--GSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~-gl~~GDiI~~ing~~i~s--~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++.. .|++||.|++|||+.+.. -.++.++|.+.+.|.+++|++.+-.
T Consensus 34 rI~~gg~a~r~g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~p~ 90 (95)
T 3gge_A 34 RIKDGGVIDSVKTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIEPK 90 (95)
T ss_dssp EECTTSHHHHCTTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEEEC
T ss_pred EEcCCChHHhcCCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEECcc
Confidence 45667776654 599999999999999975 5689999999999999999998743
No 317
>2lob_A Golgi-associated PDZ and coiled-coil motif-contai protein; structural protein-hydrolase complex, peptide binding protei; NMR {Homo sapiens}
Probab=96.65 E-value=1.4e-05 Score=64.69 Aligned_cols=49 Identities=29% Similarity=0.389 Sum_probs=39.1
Q ss_pred cccccccccc-cCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEE
Q 016647 316 GLLSTKRDAY-GRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVL 366 (385)
Q Consensus 316 ~v~~~~~a~~-~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~ 366 (385)
.+.++++|++ +||++||+|++|||++|. +..++.+++.. .+++++|+|+
T Consensus 59 ~V~~~spA~~~aGL~~GD~Il~ING~~v~~~~~~~~~~~l~~--~~~~v~l~V~ 110 (112)
T 2lob_A 59 EIHPGQPADRCGGLHVGDAILAVNGVNLRDTKHKEAVTILSQ--QRGEIEFEVV 110 (112)
Confidence 5678899999 899999999999999995 46677777753 4566777764
No 318
>3qzr_A 3C protein; chymotrypsin-fold, beta-ribbon, hydrolysis, nucleus, hydrola hydrolase inhibitor complex; HET: AG7; 1.04A {Human enterovirus 71} SCOP: b.47.1.0 PDB: 3osy_A 3qzq_A* 3r0f_A* 3sjo_A* 3sjk_A 3sji_A* 3sj8_A* 3sj9_A
Probab=97.40 E-value=0.031 Score=48.85 Aligned_cols=160 Identities=16% Similarity=0.196 Sum_probs=93.0
Q ss_pred HHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEE--EEEC---C
Q 016647 123 QENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKI--VGFD---Q 197 (385)
Q Consensus 123 ~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~v--v~~d---~ 197 (385)
.-+++.++.|++. .+.=||.-|-++ ..|-..|...+ +.+.| ||++++..- .-.| .
T Consensus 13 ~l~~~N~~~vtt~---------------~g~ft~LgI~dr-~~vvP~Ha~~~-~~i~i---~g~~~~v~d~~~L~~~~g~ 72 (187)
T 3qzr_A 13 SLLRRNVRQVQTD---------------QGHFTMLGVRDR-LAVLPRHSQPG-KTIWI---EHKLVNVLDAVELVDEQGV 72 (187)
T ss_dssp HHHHHHEEEEEET---------------TEEEEEEEEEBT-EEEEEGGGCCC-SEEEE---TTEEEEEEEEEECCCTTCC
T ss_pred HHHHcCeEEEEEC---------------CCeEEEEEEeee-EEEEeCCCCCC-CEEEE---CCEEEEeeeeEEEECCCCC
Confidence 3445668888772 223478888655 89999998433 44332 566655421 1112 2
Q ss_pred CCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEccccCC
Q 016647 198 DKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINP 276 (385)
Q Consensus 198 ~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~ 276 (385)
..||++++++... +++-++---.++...-..+.++-+...... .+..|.+...... .. .+......+.++.+...
T Consensus 73 ~~Elt~v~l~~~~-kfRDIrkfi~~~~~~~~~~~L~~ns~~~~~~~~~vG~v~~~g~i-nl--sg~~t~r~l~Y~~pTk~ 148 (187)
T 3qzr_A 73 NLALTLITLDTNE-KFRDITKFIPENISTASDATLVINTEHMPSMFVPVGDVVQYGFL-NL--SGKPTHRTMMYNFPTKA 148 (187)
T ss_dssp CCSEEEEEECSSC-CBCCCGGGSCSSCCCEEEEEEEECCSSSCSEEEEEEEEEEEEEE-EE--TTEEEEEEEEESSCCCT
T ss_pred EEEEEEEEcCCCc-cccchHHhCccCcCCCCceEEEEEcCCCcceEEEeccEEEeceE-eC--CCCccccEEEECCCCCC
Confidence 4699999998654 333332111122222224455544433323 2344655543322 11 22334678899999999
Q ss_pred CCCCceeeCCCccEEEEeecccCCCCCCCCceeeecc
Q 016647 277 GNSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPV 313 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~ 313 (385)
|+=||+|+. .|+++||+.++- ...||+.+.
T Consensus 149 G~CGgvl~~-~gkIiGIHvaGn------G~~G~~a~L 178 (187)
T 3qzr_A 149 GQCGGVVTS-VGKIIGIHIGGN------GRQGFCAGL 178 (187)
T ss_dssp TCTTCEEEE-TTEEEEEEEEEC------SSCEEEEEC
T ss_pred CccCCeEEe-cCcEEEEEECCC------CCcEEEEEe
Confidence 999999995 899999999861 245676654
No 319
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=97.34 E-value=0.00029 Score=77.41 Aligned_cols=56 Identities=21% Similarity=0.398 Sum_probs=49.2
Q ss_pred ccccccC--CCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECC-EEEEEEEEe
Q 016647 321 KRDAYGR--LILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGD-QKEKIPVKL 378 (385)
Q Consensus 321 ~~a~~~g--l~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g-~~~~~~v~~ 378 (385)
+|++++| |+ ||+|++|||++|.++.++.+++.. ++|++|+|+|.|+| +.++++++.
T Consensus 767 spa~~ag~~l~-GD~I~~i~g~~~~~~~~~~~~~~~-~~g~~v~l~v~r~~~~~~~~~~~~ 825 (1045)
T 1k32_A 767 SPIFEYGIDPT-GYLIEDIDGETVGAGSNIYRVLSE-KAGTSARIRLSGKGGDKRDLMIDI 825 (1045)
T ss_dssp CGGGGGTCCCT-TCEEEEETTEECBTTBCHHHHHHT-TTTSEEEEEEECSSSCEEEEEEEC
T ss_pred ChHHHCCCCcC-CCEEEEECCEEccchhhHHHhhcC-CCCCEEEEEEECCCCceEEEEEEE
Confidence 8999999 99 999999999999999888888876 68999999999987 455666663
No 320
>2hal_A Hepatitis A protease 3C; 3C protease, inhibitor design; HET: BBL; 1.35A {Hepatitis a virus} SCOP: b.47.1.4 PDB: 2h6m_A* 2h9h_A* 2cxv_A* 2a4o_A* 1hav_A 1qa7_A*
Probab=97.34 E-value=0.0034 Score=56.34 Aligned_cols=175 Identities=14% Similarity=0.129 Sum_probs=95.8
Q ss_pred HHHHHHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCC---eE--EEEecCCCeEeeE--
Q 016647 119 VRLFQENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGAS---DI--RVTFADQSAYDAK-- 191 (385)
Q Consensus 119 ~~~~~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~---~i--~V~~~dg~~~~a~-- 191 (385)
.++...+.+-.|+|.....+.. .....+|..|-.+ +.|...|...... .+ .+.. +|+.|...
T Consensus 3 ~~i~~~v~~N~~~i~~~~~~~~---------~~~~~t~LgI~~r-~~lvP~H~~~~~~~~~~~~~~i~i-~g~~~~~~~~ 71 (212)
T 2hal_A 3 LEIAGLVRKNLVQFGVGEKNGS---------VRWVMNALGVKDD-WLLVPSHAYKFEKDYEMMEFYFNR-GGTYYSISAG 71 (212)
T ss_dssp HHHHHHHHHHEEEEEEEETTSC---------CEEEEEEEEEEBT-EEEEEGGGTTTSTTGGGEEEEEEE-TTEEEEEEGG
T ss_pred eeehhhhhccEEEEEEeCCCCC---------cceEEEEEEEcCC-EEEEecccCcccccccccceEEEE-CCEEEeeccc
Confidence 3556667777888877542221 1236799999766 9999999975322 22 2333 56655443
Q ss_pred ---EEEEC-CCCCeEEEEEcCCCCCCccee--cCCCCC-CCCCC-EEEEEeCCCCCCCceEEe------EEeeeeeeecc
Q 016647 192 ---IVGFD-QDKDVAVLRIDAPKDKLRPIP--IGVSAD-LLVGQ-KVYAIGNPFGLDHTLTTG------VISGLRREISS 257 (385)
Q Consensus 192 ---vv~~d-~~~DlAlLkv~~~~~~~~~l~--l~~~~~-~~~G~-~V~~iG~p~g~~~~~~~G------~Vs~~~~~~~~ 257 (385)
+...| ...||++++++... +++.+. +.+..+ ...++ .+.+++...+.......+ .++.. . .
T Consensus 72 ~v~~~~~d~~~~Dl~lv~Lp~~~-~FrDIrk~f~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~~~~~~~~~-~-i-- 146 (212)
T 2hal_A 72 NVVIQSLDVGFQDVVLMKVPTIP-KFRDITQHFIKKGDVPRALNRLATLVTTVNGTPMLISEGPLKMEEKATYV-H-K-- 146 (212)
T ss_dssp GSEEECSSSSCCSEEEEECTTSC-CBCCCGGGBCCGGGGGGTTTSCEEEEEEETTEEEEEEECSCEEEEEEEEE-E-E--
T ss_pred cceeEeccCCCceEEEEECCCCC-ccCChhHhcCCcccccccccceEEEEeccCCCceEEecccccccceeeEE-E-e--
Confidence 33344 46899999996532 232222 111111 22233 233332111111111111 11100 0 0
Q ss_pred CCCCCCcc----cEEEEccccCCCCCCceeeCC----CccEEEEeecccCCCCCCCCceeeecccc
Q 016647 258 AATGRPIQ----DVIQTDAAINPGNSGGPLLDS----SGSLIGINTAIYSPSGASSGVGFSIPVDT 315 (385)
Q Consensus 258 ~~~~~~~~----~~i~~d~~i~~G~SGGPlvn~----~G~VVGI~s~~~~~~~~~~~~g~aIP~~~ 315 (385)
...+.... ..+.++++..+|+=||||+.. .|+++||+.++- .+.||+-+...
T Consensus 147 ~~~G~~~~~~~~~~~~Y~~pT~~G~CGs~li~~~~~~~~kIiGiHvaG~------g~~G~a~~ltr 206 (212)
T 2hal_A 147 KNDGTTVDLTVDQAWRGKGEGLPGMCGGALVSSNQSIQNAILGIHVAGG------NSILVAKLVTQ 206 (212)
T ss_dssp CTTSCEEEEEEEEEEEEECCCCTTCTTCEEEESCGGGTTCEEEEEEEEE------TTEEEEEECCG
T ss_pred cCCCcccccccceEEEEecCCCCCcCCCeEEEccCCCCceEEEEEeCcC------CCcEEEEeecH
Confidence 11122222 668899999999999999864 799999999873 24678877643
No 321
>3zve_A 3C protease; hydrolase, michael inhibitor; HET: G84; 1.80A {Human enterovirus} PDB: 3zv8_A* 3zva_A* 3zvb_A* 3zv9_A* 3zvd_A* 3zvc_A* 3zvf_A* 3zvg_A*
Probab=97.31 E-value=0.0079 Score=52.91 Aligned_cols=146 Identities=16% Similarity=0.210 Sum_probs=82.1
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeE--EEEECC---CCCeEEEEEcCCCCCCccee--cCCCCCC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP--IGVSADL 224 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~l~--l~~~~~~ 224 (385)
+.=||..|-++ ++|.+.|...+ +.+ .+ +|+.+... ....|. ..||++++++... +++-++ +.+ ...
T Consensus 23 G~ft~LgI~dr-~~lvP~Ha~~~-~ti--~i-~g~~~~v~d~~~l~~~~~~~~Dlt~v~l~~~~-kFRDIr~~~~~-~~~ 95 (190)
T 3zve_A 23 GEFTMLGVHDR-VAVIPTHASVG-ETI--YI-NDVETKVLDACALRDLTDTNLEITIVKLDRNQ-KFRDIRHFLPR-YED 95 (190)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCCC-SEE--EE-TTEEEEEEEEEEEECTTCCEEEEEEEEECCSS-CBCCCGGGSCS-SCC
T ss_pred EEEEEEEEeCC-EEEEecCCCCC-cEE--EE-CCEEEEeeEEEEEEcCCCCeEEEEEEEcCCCc-ccCchHHhccc-cCC
Confidence 34478878666 99999996543 232 22 34333221 112332 4599999998653 333321 221 112
Q ss_pred CCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCC
Q 016647 225 LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (385)
Q Consensus 225 ~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~ 304 (385)
...+.+.++-.+....-....|.+........ .+......+.++++..+|+=||||+ .+|+++||+.++- +
T Consensus 96 ~~~~~~l~i~s~~~~~~~~~v~~v~~~~~i~l---~g~~~~~~~~Y~~pT~~G~CG~~li-~~gkI~GiHvaG~----G- 166 (190)
T 3zve_A 96 DYNDAVLSVHTSKFPNMYIPVGQVTNYGFLNL---GGTPTHRILMYNFPTRAGQCGGVVT-TTGKVIGIHVGGN----G- 166 (190)
T ss_dssp CEEEEEEEECSSSCSSEEEEEEEEEEEEEEEE---TTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC----S-
T ss_pred CCCCeEEEEECCCCcceEEecccceEeceeec---CCCeeeeeEEEecCCCCCccCCeEE-ECCCEEEEEECcC----C-
Confidence 23344444433222111233444443332211 2334567888999999999999999 5889999999872 1
Q ss_pred CCceeeeccc
Q 016647 305 SGVGFSIPVD 314 (385)
Q Consensus 305 ~~~g~aIP~~ 314 (385)
..||+-+..
T Consensus 167 -~~g~~~~l~ 175 (190)
T 3zve_A 167 -AQGFAAMLL 175 (190)
T ss_dssp -SCEEEEECC
T ss_pred -CceEehhhh
Confidence 457776554
No 322
>4dcd_A Protease 3C, genome polyprotein; antiviral inhibitors, dipeptidyl inhib hydrolase-hydrolase inhibitor complex; HET: K36; 1.69A {Human poliovirus 1} PDB: 1l1n_A
Probab=97.29 E-value=0.02 Score=50.16 Aligned_cols=145 Identities=16% Similarity=0.201 Sum_probs=82.6
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeE--EEEECC---CCCeEEEEEcCCCCCCccee-cCCCCCCC
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADLL 225 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~l~-l~~~~~~~ 225 (385)
+.-||.-|-++ +.|-..|...+ +.+. + +|+.++.. ....|. ..||++++++... +++-++ +-. +...
T Consensus 30 G~ft~LgI~d~-~~viP~Ha~p~-~~i~--i-~G~~~~v~d~~~l~~~~gv~lElt~V~l~r~~-kFRDIr~fi~-~~~~ 102 (190)
T 4dcd_A 30 GEFTMLGVHDN-VAILPTHASPG-ESIV--I-DGKEVEILDAKALEDQAGTNLEITIITLKRNE-KFRDIRPHIP-TQIT 102 (190)
T ss_dssp EEEEEEEEEBT-EEEEEGGGCCC-SEEE--E-TTEEEEEEEEEEEECTTCCEEEEEEEEESSSC-CBCCCGGGSC-SSCC
T ss_pred eEEEEEEEECc-EEEEeCCCCCC-cEEE--E-CCEEEEeeEEEEEecCCCCeEEEEEEEcCCCc-cccchhHhcc-ccCC
Confidence 34577777655 99999995432 3333 3 45554432 122332 3599999998754 343332 111 1122
Q ss_pred CCCEEEEEeCCCCCCCc-eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCC
Q 016647 226 VGQKVYAIGNPFGLDHT-LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGAS 304 (385)
Q Consensus 226 ~G~~V~~iG~p~g~~~~-~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~ 304 (385)
....+..+=+-...... +..|.+........ .+......+.++.+..+|+=||||+ .+|+++||+.++- +
T Consensus 103 ~~~~~~L~vn~~~~~~~~~~vg~v~~~g~i~l---sg~~t~r~l~Y~~pT~~G~CGg~l~-~~gkIlGIHvaG~----G- 173 (190)
T 4dcd_A 103 ETNDGVLIVNTSKYPNMYVPVGAVTEQGYLNL---GGRQTARTLMYNFPTRAGQCGGVIT-CTGKVIGMHVGGN----G- 173 (190)
T ss_dssp CEEEEEEEECSSSSTTEEEEEEEEEEEEEEEE---TTEEEEEEEEESSCCCTTCTTCEEE-ETTEEEEEEEEEC----S-
T ss_pred CCCceEEEEecCCCccEEEEeeeeEEeccccC---CCCcccceEEEccCCCCCccCCEEE-eCCCEEEEEECCC----C-
Confidence 33344433232222222 33444443332211 2344567889999999999999999 5889999999872 2
Q ss_pred CCceeeecc
Q 016647 305 SGVGFSIPV 313 (385)
Q Consensus 305 ~~~g~aIP~ 313 (385)
..||+-+.
T Consensus 174 -~~G~aa~L 181 (190)
T 4dcd_A 174 -SHGFAAAL 181 (190)
T ss_dssp -SCEEEEEC
T ss_pred -CceEeeeh
Confidence 45666544
No 323
>3q3y_A HEVB EV93 3C protease; cysteine trypsin-like protease, 3C cysteine protease (picorn antiviral compound 1 (AG7404); HET: XNV; 1.32A {Human enterovirus B} SCOP: b.47.1.4 PDB: 3q3x_A* 3ruo_A* 3zyd_A 3zz5_A* 3zz6_A* 3zz7_A* 3zz8_A* 3zz9_A* 3zza_A* 3zzb_A* 2ztx_A 2vb0_A 2zty_A 2ztz_A 2zu3_A* 3zye_A 3zz3_A 2zu1_A 3zz4_A 3zzc_A* ...
Probab=97.24 E-value=0.039 Score=48.21 Aligned_cols=160 Identities=14% Similarity=0.176 Sum_probs=92.4
Q ss_pred HhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeE--EEEECC---C
Q 016647 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---D 198 (385)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~ 198 (385)
-.++.++.|++. .+.=||.-|-++ ..|-..|.-. .+.+. -||++++.. ..-.|. .
T Consensus 12 l~k~N~~~vtT~---------------~G~ft~LgI~dr-~~vvPtHa~~-~~~i~---i~G~~~~v~d~~~L~~~~g~~ 71 (191)
T 3q3y_A 12 MMKRNASTVKTE---------------YGEFTMLGIYDR-WAVLPRHAKP-GPTIL---MNDQEVGVLDAKELVDKDGTN 71 (191)
T ss_dssp HHHHHEEEEEET---------------TEEEEEEEEEBT-EEEEEGGGCC-CSEEE---ETTEEEEEEEEEEEECTTCCE
T ss_pred HHHcCeEEEEEC---------------CCcEEEEEEece-EEEEECCCCC-CCEEE---ECCEEEEeeeEEEEEcCCCCE
Confidence 445668888772 233477777544 8999999833 23332 266666541 111232 3
Q ss_pred CCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCC
Q 016647 199 KDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPG 277 (385)
Q Consensus 199 ~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G 277 (385)
.||++|+++... +++-++-=-.+.........++-+...... .+..|.+...... .. .+......+.++++...|
T Consensus 72 lElt~v~l~~~~-kFRDIrkfi~~~~~~~~~~~Lv~ns~~~p~~~~~vG~v~~~g~i-nl--sg~~t~r~l~Y~~pTk~G 147 (191)
T 3q3y_A 72 LELTLLKLNRNE-KFRDIRGFLAREEVEVNEAVLAINTSKFPNMYIPVGQVTDYGFL-NL--GGTPTKRMLVYNFPTRAG 147 (191)
T ss_dssp EEEEEEEEECSS-CBCCCGGGBCSSCCCEEEEEEEECSSSSTTEEEEEEEEEEEEEE-EE--TTEEEEEEEEEESCCCTT
T ss_pred EEEEEEECCCCc-cccchHHhcccccccCCceEEEEEcCCCcceEEEeccEEEcceE-eC--CCCcccCEEEecCCCCCC
Confidence 599999998754 343332111122333333444444333322 2344655543221 11 122346789999999999
Q ss_pred CCCceeeCCCccEEEEeecccCCCCCCCCceeeeccc
Q 016647 278 NSGGPLLDSSGSLIGINTAIYSPSGASSGVGFSIPVD 314 (385)
Q Consensus 278 ~SGGPlvn~~G~VVGI~s~~~~~~~~~~~~g~aIP~~ 314 (385)
+=||+|+. .|+++||+.++- -..||+.+..
T Consensus 148 ~CGgvL~~-~gkIiGIHvgGn------G~~Gfaa~L~ 177 (191)
T 3q3y_A 148 QCGGVLMS-TGKVLGIHVGGN------GHQGFSAALL 177 (191)
T ss_dssp CTTCEEEE-TTEEEEEEEEEE------TTEEEEEECC
T ss_pred ccCCEEEe-CCCEEEEEECCC------CcceEEeehh
Confidence 99999995 799999999862 2457776553
No 324
>1w9e_A Syntenin 1; cell adhesion, adhesion/complex, PDZ domain, scaffolding protein signaling protein; 1.56A {Homo sapiens} SCOP: b.36.1.1 b.36.1.1 PDB: 1n99_A 1v1t_A 1obz_A 1w9o_A 1w9q_A 1ybo_A
Probab=97.24 E-value=1.6e-05 Score=68.56 Aligned_cols=52 Identities=13% Similarity=0.151 Sum_probs=37.8
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEEEEEEEe
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKEKIPVKL 378 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~~~~v~~ 378 (385)
.+.++++++.+||++||+|++|||++|.++. ++.+.+++.|+|+..++.+++
T Consensus 113 ~v~~~s~a~~aGl~~GD~I~~ing~~v~~~~-----------~~~v~~~v~r~g~~~~l~v~~ 164 (166)
T 1w9e_A 113 SIVKDSSAARNGLLTEHNICEINGQNVIGLK-----------DSQIADILSTSGTVVTITIMP 164 (166)
T ss_dssp EECTTSHHHHTTCCSSEEEEEETTEECTTCC-----------HHHHHHHHHHSCSEEEEEEEE
T ss_pred EEccCCHHHHcCCCCCCEEEEECCEECCCCC-----------hHHHHHHHhhCCCEEEEEEEE
Confidence 4567889999999999999999999999873 233344455555555555544
No 325
>2pka_A Kallikrein A; serine proteinase; 2.05A {Sus scrofa} SCOP: b.47.1.2 PDB: 2kai_A 1hia_A
Probab=97.11 E-value=0.001 Score=49.74 Aligned_cols=28 Identities=21% Similarity=0.182 Sum_probs=22.6
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEe
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTF 182 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~ 182 (385)
..|.|.+|+++ ||||+|||+.+. ..|.+
T Consensus 24 ~~CgGslIs~~-~VLTAAHC~~~~--~~v~~ 51 (80)
T 2pka_A 24 FQCGGVLVNPK-WVLTAAHCKNDN--YEVWL 51 (80)
T ss_dssp EEEEEEEEETT-EEEECGGGCCSC--CEEEE
T ss_pred eEEEEEEEcCC-EEEECHHHCCCC--cEEEE
Confidence 47999999987 999999999753 34554
No 326
>1cqq_A Type 2 rhinovirus 3C protease; viral protein, hydrolase; HET: AG7; 1.85A {Human rhinovirus 2} SCOP: b.47.1.4 PDB: 2xya_A*
Probab=97.06 E-value=0.067 Score=46.55 Aligned_cols=144 Identities=17% Similarity=0.192 Sum_probs=81.9
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeE--EEEECC---CCCeEEEEEcCCCCCCccee-cCCCCCCCC
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADLLV 226 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~l~-l~~~~~~~~ 226 (385)
.-++.-|..+ +.|-..|...+. . +.+ +|+.++.. ...+|+ ..||++++++... +++-++ +-. +....
T Consensus 24 ~~t~Lgi~~~-~~lvP~Ha~~~~-~--i~i-~g~~v~i~d~~~l~d~~g~~~El~lv~l~~~~-kfrDi~kfip-~~~~~ 96 (180)
T 1cqq_A 24 KFTGLGVYDR-FVVVPTHADPGK-E--IQV-DGITTKVIDSYDLYNKNGIKLEITVLKLDRNE-KFRDIRRYIP-NNEDD 96 (180)
T ss_dssp EEEEEEEEBT-EEEEEGGGCCCS-E--EEE-TTEEEEEEEEEEEECTTSCEEEEEEEEECSSC-CBCCGGGGSC-SSCCC
T ss_pred cEEEEEEeeE-EEEEccCcCccc-E--EEE-CCEEEEeccceEEEcCCCCeEEEEEEEcCCcc-ccCccHhhcC-CCcCC
Confidence 3567777665 999999998873 2 322 45444333 233443 3599999997643 343332 211 11111
Q ss_pred CCEEEEEeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCC
Q 016647 227 GQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASS 305 (385)
Q Consensus 227 G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~ 305 (385)
....+.+-+-..... .+..|.+........ .+......+.++++..+|+=||+|+ .+|+++||+.++- +
T Consensus 97 ~~~~~l~~n~~~~~~~~v~~g~~~~~g~i~~---~g~~~~r~l~Y~~pT~~G~CGsvl~-~~gkIiGIHvAG~----G-- 166 (180)
T 1cqq_A 97 YPNCNLALLANQPEPTIINVGDVVSYGNILL---SGNQTARMLKYSYPTKSGYCGGVLY-KIGQVLGIHVGGN----G-- 166 (180)
T ss_dssp EEEEEEEECTTSSSCEEEEEEEEEECCCEEE---TTEEECSEEEECCCCCTTCTTCEEE-ETTEEEEEEEEEC----S--
T ss_pred CCceEEEEEcCCCceEEEEccceeeeeeEec---CCcEeccEEEecCCCCCCcCCCeEE-ECCCEEEEEECCC----C--
Confidence 122333333222222 244454443222111 1233457899999999999999999 4679999999871 2
Q ss_pred Cceeeecc
Q 016647 306 GVGFSIPV 313 (385)
Q Consensus 306 ~~g~aIP~ 313 (385)
..||+.+.
T Consensus 167 ~~G~aa~l 174 (180)
T 1cqq_A 167 RDGFSAML 174 (180)
T ss_dssp SCEEEEEC
T ss_pred CcEEEeee
Confidence 45676554
No 327
>2b0f_A Picornain 3C (protease 3C) (P3C); beta barrel, hydrolase-hydrolase inhibitor complex; HET: CA1; NMR {Human rhinovirus 14} PDB: 2in2_A
Probab=96.99 E-value=0.016 Score=50.48 Aligned_cols=141 Identities=21% Similarity=0.312 Sum_probs=81.5
Q ss_pred EEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEee--EEEEEC---CCCCeEEEEEcCCCCCCccee-c-CCCCCCCC
Q 016647 154 GSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDA--KIVGFD---QDKDVAVLRIDAPKDKLRPIP-I-GVSADLLV 226 (385)
Q Consensus 154 GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a--~vv~~d---~~~DlAlLkv~~~~~~~~~l~-l-~~~~~~~~ 226 (385)
-||.-|-++ +.|...|...+ +.+ .+ +|+.+.. ...-.| -..||++++++... +++-++ + .+.... .
T Consensus 25 ~t~LgI~d~-~~vvP~Ha~~~-~~i--~i-~g~~~~v~d~~~l~~~~~~~~eltlv~l~~~~-kfRDIrkfi~~~~~~-~ 97 (182)
T 2b0f_A 25 FTGLGIHDR-VCVIPTHAQPG-DDV--LV-NGQKIRVKDKYKLVDPENINLELTVLTLDRNE-KFRDIRGFISEDLEG-V 97 (182)
T ss_dssp EEEEEEEBT-EEEEESTTCCC-SEE--EE-TTEEEEEEEEEEEEETTTEEEEEEEEEECCSS-CBCCGGGTBCSSCCC-S
T ss_pred EEEEEEeee-EEEEecCCCCc-cEE--EE-CCEEEEeeeeeEEEcCCCCeeEEEEEECCCcc-cccchHHhcCCCCCC-C
Confidence 377888766 99999999665 333 33 4544321 122223 25799999997654 332221 2 111111 2
Q ss_pred CCEEEEEeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecccCCCCCCC
Q 016647 227 GQKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAIYSPSGASS 305 (385)
Q Consensus 227 G~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~~~~~~~~~ 305 (385)
+.+.++ +-.+... .+..|.+...... . ..+......+.++++..+|+=||||+. +|+++||+.++- .
T Consensus 98 -~~~lv~-n~~~~p~~~~~vg~~~~~g~i-~--l~G~~t~~~~~Y~~pTk~G~CGgvl~~-~gkIlGIHvaG~------G 165 (182)
T 2b0f_A 98 -DATLVV-HSNNFTNTILEVGPVTMAGLI-N--LSSTPTNRMIRYDYATKTGQCGGVLCA-TGKIFGIHVGGN------G 165 (182)
T ss_dssp -EEEEEE-ESSSCEEEEEEEEEEEEEEEE-E--ETTEEEEEEEEEESCCCTTCTTCEEEE-TTEEEEEEEEEE------T
T ss_pred -ceEEEE-EcCCCceEEEEecceEEeceE-c--CCCcEecceEEeccCCCCcccCCeEEe-CCCEEEEEeCCC------C
Confidence 334444 2222222 2245555433321 1 123335678899999999999999994 889999999872 2
Q ss_pred Cceeeecc
Q 016647 306 GVGFSIPV 313 (385)
Q Consensus 306 ~~g~aIP~ 313 (385)
..||+.+.
T Consensus 166 ~~Gfaa~l 173 (182)
T 2b0f_A 166 RQGFSAQL 173 (182)
T ss_dssp TEEEEEEC
T ss_pred CceEehhh
Confidence 46777654
No 328
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=96.96 E-value=0.00064 Score=72.09 Aligned_cols=54 Identities=24% Similarity=0.207 Sum_probs=45.2
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQK 371 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~ 371 (385)
.+.++++++.+| |+.||+|++|||+.+.++ .++..++. .+|+.|+|+|.|+++.
T Consensus 95 ~v~~gspA~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~--~~g~~v~l~v~R~~~~ 151 (721)
T 2xkx_A 95 KIIPGGAAAQDGRLRVNDSILFVNEVDVREVTHSAAVEALK--EAGSIVRLYVMRRKPP 151 (721)
T ss_pred EeCCCCHHHhcCCCCCCCEEEEECCEECCCCCHHHHHHHhh--ccccccceEEEecccc
Confidence 456788999999 999999999999999987 45555664 3689999999999854
No 329
>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}
Probab=96.89 E-value=0.00071 Score=71.74 Aligned_cols=56 Identities=20% Similarity=0.190 Sum_probs=46.8
Q ss_pred cccccccccccC-CCCCcEEEEECCEEeCCH--HHHHHHHhcCCCCCEEEEEEEECCEEEE
Q 016647 316 GLLSTKRDAYGR-LILGDIITSVNGKKVSNG--SDLYRILDQCKVGDEVIVEVLRGDQKEK 373 (385)
Q Consensus 316 ~v~~~~~a~~~g-l~~GDiI~~ing~~i~s~--~~l~~~l~~~~~g~~v~l~v~R~g~~~~ 373 (385)
.+.++++++.+| |++||+|++|||++|.++ .++..++.. .|+.|.|+|.|+|+...
T Consensus 190 ~V~~gs~A~~aG~L~~GD~Il~Vng~~v~~~~~~~~~~~l~~--~~~~v~l~V~R~g~~~~ 248 (721)
T 2xkx_A 190 KIIEGGAAHKDGRLQIGDKILAVNSVGLEDVMHEDAVAALKN--TYDVVYLKVAKPSNAYL 248 (721)
T ss_pred EeCCCCchhhcCCCCCCCEEEEECCeeCCCCCHHHHHHHHHc--CCCeEEEEEEeCCcccc
Confidence 456788999999 999999999999999986 466666654 58899999999987643
No 330
>2bhg_A Foot-and-mouth disease virus 3C protease; chymotrypsin-like cysteine protease, capsid protein, core protein; 1.9A {Foot-and-mouth disease virus} SCOP: b.47.1.4 PDB: 2j92_A 2wv4_A 2wv5_A
Probab=96.37 E-value=0.02 Score=51.09 Aligned_cols=150 Identities=17% Similarity=0.239 Sum_probs=83.5
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEe---eEEE----EECCC---CCeEEEEEcCCCCCCcceecCCCC
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYD---AKIV----GFDQD---KDVAVLRIDAPKDKLRPIPIGVSA 222 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~---a~vv----~~d~~---~DlAlLkv~~~~~~~~~l~l~~~~ 222 (385)
+-+|..|-.+ +.|...|..++... .+.+ +++.+. .++. ..|.. .||++++++... +++-++=--.+
T Consensus 31 ~~~~LgI~~r-~~l~P~H~~~~~~~-~i~i-~g~~~~~~~~~~~~~e~~v~~~~~~~Dl~~~~l~~~~-kfrdi~k~f~~ 106 (209)
T 2bhg_A 31 ICCATGVFGT-AYLVPRHLFAEKYD-KIML-DGRAMTDSDYRVFEFEIKVKGQDMLSDAALMVLHRGN-KVRDITKHFRD 106 (209)
T ss_dssp EEEEEEEEBT-EEEEEHHHHTSCCS-EEEE-TTEEECGGGEEEECCEECCSSSCEECSEEEEEESSSC-CBCCCGGGBCS
T ss_pred EEEEeeEcCC-EEEEEcccCCCCCc-EEEE-cCEEEEeeeeEEeeceeeecCCCCceeEEEEECCCCc-ccCchhhhccc
Confidence 4456677555 89999999876221 3333 333332 2222 23433 799999997643 22222110022
Q ss_pred CC--CCCCEEEEEeCCCCCCCceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeC---CCccEEEEeecc
Q 016647 223 DL--LVGQKVYAIGNPFGLDHTLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLD---SSGSLIGINTAI 297 (385)
Q Consensus 223 ~~--~~G~~V~~iG~p~g~~~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn---~~G~VVGI~s~~ 297 (385)
++ ..++.+..+-++.........|.+........ ...+......+.++++..+|+=||+|+- ..|++|||+.++
T Consensus 107 ~~~~~~~~~~~~~~n~~~~~~~~~~g~~~~~~~~~~-~~~G~~~~~~~~Y~~pT~~G~CGs~lv~~~~~~~kIvGIHvaG 185 (209)
T 2bhg_A 107 TARMKKGTPVVGVVNNADVGRLIFSGEALTYKDIVV-SMDGDTMPGLFAYKAATRAGYAGGAVLAKDGADTFIVGTHSAG 185 (209)
T ss_dssp SCEECTTCEEEEEEEETTTEEEEEEEEESSCEECCC------CCTTEEEEECCCCTTCTTCEEEEEETTEEEEEEEEEEE
T ss_pred ccccCCCCeEEEEeccCccCceeeeeeEEEccceee-ecCCCccccEEEEcCCCCCCcCCCEEEEecCCCceEEEEEEcc
Confidence 22 34455666655543323333444432222111 1122345678999999999999999963 478999999987
Q ss_pred cCCCCCCCCceeeecc
Q 016647 298 YSPSGASSGVGFSIPV 313 (385)
Q Consensus 298 ~~~~~~~~~~g~aIP~ 313 (385)
- .+.||+-+.
T Consensus 186 ~------g~~G~aa~l 195 (209)
T 2bhg_A 186 G------NGVGYCSCV 195 (209)
T ss_dssp E------TTEEEEEEC
T ss_pred C------CCceEEEEc
Confidence 2 245676554
No 331
>4fln_A Protease DO-like 2, chloroplastic; protease, DEG, PDZ, hydrolase; 2.80A {Arabidopsis thaliana}
Probab=96.16 E-value=0.0083 Score=61.16 Aligned_cols=55 Identities=15% Similarity=0.187 Sum_probs=45.1
Q ss_pred cccccccccccCCCCCcEEEEECCEEeCCHHHHHHHHhcCCCCCEEEEEEEECCEEE
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVSNGSDLYRILDQCKVGDEVIVEVLRGDQKE 372 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~s~~~l~~~l~~~~~g~~v~l~v~R~g~~~ 372 (385)
.+.++++++..|+++||+|++|||++|+|..+|.+++.+. .++.+.++.. +++..
T Consensus 421 ~V~~~s~a~~~g~~~gdiI~~vNg~~V~s~~~l~~~l~~~-k~~~l~~~~~-~~~~i 475 (539)
T 4fln_A 421 QVLANEVNIGYEDMNNQQVLKFNGIPIRNIHHLAHLIDMC-KDKYLVFEFE-DNYVA 475 (539)
T ss_dssp EECCCGGGTTCSSCCSEEEEEETTEECCSHHHHHHHHHTC-CSSEEEEEET-TSCEE
T ss_pred EecCCchhhhcCCCCCCEEEeECCEEcCCHHHHHHHHHHc-CCCeEEEEEC-CCEEE
Confidence 4567788888999999999999999999999999999886 4677777753 44443
No 332
>3suz_A Amyloid beta A4 precursor protein-binding family 2; APP binding; 2.70A {Rattus norvegicus} PDB: 1u3b_A 1u39_A 1x45_A 1u37_A 1u38_A 2yt8_A
Probab=95.88 E-value=0.0014 Score=64.41 Aligned_cols=52 Identities=17% Similarity=0.288 Sum_probs=0.0
Q ss_pred cccccccccccCCCCCcEEEEECCEEeC--CHHHHHHHHhcCCCCCEEEEEEEECC
Q 016647 316 GLLSTKRDAYGRLILGDIITSVNGKKVS--NGSDLYRILDQCKVGDEVIVEVLRGD 369 (385)
Q Consensus 316 ~v~~~~~a~~~gl~~GDiI~~ing~~i~--s~~~l~~~l~~~~~g~~v~l~v~R~g 369 (385)
.+.++++++.+||++||+|++|||++|. +..++.+++.. .++.+.|+|.+..
T Consensus 321 ~V~~gs~A~~aGL~~GD~Il~VNg~~v~~~s~~~~~~~l~~--~~~~v~L~V~p~~ 374 (388)
T 3suz_A 321 SLMRGGIAERGGVRVGHRIIEINGQSVVATAHEKIVQALSN--SVGEIHMKTMPAA 374 (388)
T ss_dssp --------------------------------------------------------
T ss_pred EeecCCHHHHcCCCCCCEEEEECCEECCCCCHHHHHHHHHh--CCCeEEEEEEecc
Confidence 5678899999999999999999999997 45777777765 5788899887754
No 333
>2ijd_1 Picornain 3C, RNA-directed RNA polymerase; RNA-dependent RNA polymerase, picornavirus, protease, hydrolase, transferase; 3.40A {Human poliovirus 1} SCOP: b.47.1.4 e.8.1.4
Probab=95.64 E-value=0.52 Score=49.04 Aligned_cols=133 Identities=15% Similarity=0.180 Sum_probs=73.0
Q ss_pred EEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeE--EEEECC---CCCeEEEEEcCCCCCCccee-cCCCCCCCCC
Q 016647 154 GSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAK--IVGFDQ---DKDVAVLRIDAPKDKLRPIP-IGVSADLLVG 227 (385)
Q Consensus 154 GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~--vv~~d~---~~DlAlLkv~~~~~~~~~l~-l~~~~~~~~G 227 (385)
-+|..|..+ .+|...|...+. .+. + +|..+... ...+|. ..||+++++.... .++.++ +-. ......
T Consensus 25 ~~~l~i~~~-~~l~p~H~~~~~-~~~--i-~g~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~-~frdi~~~~~-~~~~~~ 97 (644)
T 2ijd_1 25 FTMLGVHDN-VAILPTHASPGE-SIV--I-DGKEVAILAAKALADQAGTNLEITIITLKRNE-KFRDIRPHIP-TQITET 97 (644)
T ss_dssp EEEEEEEBT-EEEEEGGGCCCS-EEE--E-TTEEEEEEECCEEECTTSCEEEEEEEEECSSC-CBCCCGGGSC-SSCCCE
T ss_pred EEEEEEece-EEEEccccCCCc-eEE--E-CCEEEEeccceeEEcCCCCceeEEEEECCCCC-CcCChHHhcc-CCccCC
Confidence 456667655 899999988643 322 2 33332211 112344 4599999997433 333222 211 111122
Q ss_pred CEEEEEeCCCCCCC-ceEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEeecc
Q 016647 228 QKVYAIGNPFGLDH-TLTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 228 ~~V~~iG~p~g~~~-~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
....++-...+... .+..|.+..... +. ..+......+.++.+..+|+=|+||+. +|+||||+.++
T Consensus 98 ~~~~l~~~~~~~~~~~~~~~~~~~~g~-~~--~~g~~~~~~~~y~~~T~~G~CG~~l~~-~gkIvGiHvaG 164 (644)
T 2ijd_1 98 NDGVLIVNTSKYPNMYVPVGAVTEQGY-LN--LGGRQTARTLMYNFPTRAGQAGGVITC-TGKVIGMHVGG 164 (644)
T ss_dssp EEEEEEECSSSSTTEEEEEEEEEEEEE-EC--CTTSCEEEEEEECSCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred CceEEEEcCCCCceEEEEeeeeeeccc-ee--cCCCccccEEEEcCCCCCCCCCchhhh-CCcEEEEEEcC
Confidence 22323222222222 223455543222 11 123345678889999999999999984 79999999987
No 334
>3e90_B NS3 protease; trypsin-like serine protease, protease inhibitor, catalytic histidine, induced FIT, ATP-binding, capsid protein, helicase; HET: NKK; 2.45A {West nile virus} SCOP: b.47.1.3
Probab=93.82 E-value=0.14 Score=44.13 Aligned_cols=131 Identities=20% Similarity=0.233 Sum_probs=74.7
Q ss_pred HhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEE
Q 016647 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (385)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (385)
...+.|-+|....-- ...-.|-|+.- +|.+=|-.||-+++.- .. +++.+ .....|-..|+
T Consensus 21 ~l~dGVYRI~~~gl~----------G~~Q~GVGv~k--~GVFHTMWHVTrGa~l---~~-~g~~l--~P~WasV~~Dl-- 80 (198)
T 3e90_B 21 DTTTGVYRIMTRGLL----------GSYQAGAGVMV--EGVFHTLWHTTKGAAL---MS-GEGRL--DPYWGSVKEDR-- 80 (198)
T ss_dssp CCCSEEEEEEEEETT----------EEEEEEEEEEE--TTEEEECHHHHTTCCE---EE-TTEEE--CEEEEETTTTE--
T ss_pred cCCCceEEEEecccc----------ccceeeeEEee--CCEEEeeeeecCcceE---EE-CCcEe--cceeehheece--
Confidence 446788999774321 11235777766 4899999999988542 22 23222 22234455665
Q ss_pred EEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCC
Q 016647 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (385)
Q Consensus 204 Lkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 280 (385)
+..-.+ -+|. ..-.-.++|.++-++-+.... ...|++.-. . .++-.+.....+|.||
T Consensus 81 isYGG~------WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~----------~--g~iGaV~lD~p~GTSG 140 (198)
T 3e90_B 81 LCYGGP------WKLQ--HKWNGQDEVQMIVVEPGKNVKNVRTKPGVFKTP----------E--GEIGAVTLDFPTGTSG 140 (198)
T ss_dssp EEESSS------CCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCTTCTT
T ss_pred eecCCc------ccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC----------C--CeEEEEECCCCCCCCC
Confidence 333332 1221 222334778888877665432 233443311 1 1223344445589999
Q ss_pred ceeeCCCccEEEEe
Q 016647 281 GPLLDSSGSLIGIN 294 (385)
Q Consensus 281 GPlvn~~G~VVGI~ 294 (385)
+|++|.+|+|||+-
T Consensus 141 SPIin~~G~VVGLY 154 (198)
T 3e90_B 141 SPIVDKNGDVIGLY 154 (198)
T ss_dssp CEEECTTCCEEEEC
T ss_pred CceecCCCcEEEEe
Confidence 99999999999984
No 335
>2fom_B Polyprotein; flavivirus, NS3 protease, NS2B cofactor, viral protein-prote complex; 1.50A {Dengue virus 2} SCOP: b.47.1.3 PDB: 1df9_A 2qid_A 1bef_A
Probab=93.79 E-value=0.12 Score=44.24 Aligned_cols=132 Identities=20% Similarity=0.273 Sum_probs=72.9
Q ss_pred HHhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeE
Q 016647 123 QENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVA 202 (385)
Q Consensus 123 ~~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlA 202 (385)
.+..+.|-+|....-- ...-.|-|+.- +|.+=|-.||-+++.- .. +++.+ .....|-..|+
T Consensus 16 ~~l~dGvYRI~~~gl~----------G~~Q~GVGv~~--~GVFHTmWHVTrGa~l---~~-~g~~l--~P~wa~V~~Dl- 76 (185)
T 2fom_B 16 AELEDGAYRIKQKGIL----------GYSQIGAGVYK--EGTFHTMWHVTRGAVL---MH-KGKRI--EPSWADVKKDL- 76 (185)
T ss_dssp --CCSEEEEEEEEETT----------EEEEEEEEEEE--TTEEEEEHHHHTTCCE---EE-TTEEE--CEEEEETTTTE-
T ss_pred ccCCCcEEEEEecccc----------ccceeeeEEee--CCEEEeeeeecCcceE---EE-CCcEe--cceeehheece-
Confidence 3477889998764321 11235777776 4899999999988542 22 33322 12234445665
Q ss_pred EEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCC
Q 016647 203 VLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNS 279 (385)
Q Consensus 203 lLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~S 279 (385)
+..-.+ -+|. ..-..+++|.++-.+-+.... ...|+..- ... ++..+.....+|.|
T Consensus 77 -isYGG~------WkL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~----------~~G--eigaI~lD~p~GTS 135 (185)
T 2fom_B 77 -ISYGGG------WKLE--GEWKEGEEVQVLALEPGKNPRAVQTKPGLFKT----------NTG--TIGAVSLDFSPGTS 135 (185)
T ss_dssp -EEESSS------CCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEEC----------SSC--EEEEECCCSCGGGT
T ss_pred -eecCCc------ccCc--cccCCCceEEEEEECCCCceEEEEcCCceeec----------CCC--eEEEEECCCCCCCC
Confidence 334332 1121 122345777777766554332 12233221 011 23333445568999
Q ss_pred CceeeCCCccEEEEe
Q 016647 280 GGPLLDSSGSLIGIN 294 (385)
Q Consensus 280 GGPlvn~~G~VVGI~ 294 (385)
|+|++|.+|+|||+.
T Consensus 136 GSPIin~~G~vvGLY 150 (185)
T 2fom_B 136 GSPIVDKKGKVVGLY 150 (185)
T ss_dssp TCEEECTTSCEEEET
T ss_pred CCceEccCCcEEEEe
Confidence 999999999999984
No 336
>3u1j_B Serine protease NS3; serine protease, ER MEM hydrolase-hydrolase inhibitor complex; 1.80A {Dengue virus 3} SCOP: b.47.1.3 PDB: 3u1i_B
Probab=93.76 E-value=0.18 Score=43.33 Aligned_cols=131 Identities=22% Similarity=0.288 Sum_probs=74.1
Q ss_pred HhCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEE
Q 016647 124 ENTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAV 203 (385)
Q Consensus 124 ~~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAl 203 (385)
...+-|-+|....-- ..+-.|-|+.- +|.+=|-.||-+++.- .. +++.+ .....|-..|+
T Consensus 26 ~~~dGVYRI~~~gl~----------G~~Q~GVGv~k--~GVFHTMWHVTrGa~l---~~-~g~~l--~P~wasV~~Dl-- 85 (191)
T 3u1j_B 26 ELEEGVYRIKQQGIF----------GKTQVGVGVQK--EGVFHTMWHVTRGAVL---TH-NGKRL--EPNWASVKKDL-- 85 (191)
T ss_dssp CCCSEEEEEEEEETT----------EEEEEEEEEEE--TTEEEEEHHHHTTCCE---EE-TTEEE--CEEEEETTTTE--
T ss_pred cCCCceEEEEecccc----------ccceeeeEEee--CCEEEeeeeecCcceE---EE-CCcEe--cceeecceece--
Confidence 456789999774321 11235777766 4899999999988542 22 23222 22234455665
Q ss_pred EEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCC
Q 016647 204 LRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSG 280 (385)
Q Consensus 204 Lkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SG 280 (385)
+..-.+ -+|. ..-.-.++|.++-++-+.... ...|++.-. . .++-.+.....+|.||
T Consensus 86 isYGG~------WkL~--~~W~g~~eVQl~Av~Pgk~~~~~Qt~PG~f~~~--------~----g~iGaV~lD~p~GTSG 145 (191)
T 3u1j_B 86 ISYGGG------WRLS--AQWQKGEEVQVIAVEPGKNPKNFQTMPGTFQTT--------T----GEIGAIALDFKPGTSG 145 (191)
T ss_dssp EEESSS------CCCC--CCCCTTCCEEEEECCTTSCCEEEEECCEEEECS--------S----CEEEEECCCCCTTCTT
T ss_pred eecCCc------ccCC--cccCCCceEEEEEECCCCceEEEEeCCeEEEcC--------C----CeEEEEECCCCCCCCC
Confidence 333332 1221 112234778888877655432 233433310 1 1233344445589999
Q ss_pred ceeeCCCccEEEEe
Q 016647 281 GPLLDSSGSLIGIN 294 (385)
Q Consensus 281 GPlvn~~G~VVGI~ 294 (385)
+|++|.+|+|||+-
T Consensus 146 SPIin~~G~VVGLY 159 (191)
T 3u1j_B 146 SPIINREGKVVGLY 159 (191)
T ss_dssp CEEECTTSCEEEEC
T ss_pred CceecCCCcEEEEe
Confidence 99999999999984
No 337
>2fp7_B Serine protease NS3; flavivirus, NS3 protease, NS2B cofactor; HET: OAR; 1.68A {West nile virus} SCOP: b.47.1.3
Probab=93.64 E-value=0.11 Score=43.86 Aligned_cols=113 Identities=20% Similarity=0.255 Sum_probs=63.5
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVY 231 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~ 231 (385)
-.|-|+.- +|.+=|-.||-+++.- .. +++.+ .....|-..|+ +..-.+ -+|. ..-..+++|.
T Consensus 20 Q~GVGv~~--~GVFHTmWHVTrGa~l---~~-~g~~~--~P~wa~V~~Dl--isYGG~------WkL~--~kW~g~~eVq 81 (172)
T 2fp7_B 20 QAGAGVMV--EGVFHTLWHTTKGAAL---MS-GEGRL--DPYWGSVKEDR--LCYGGP------WKLQ--HKWNGHDEVQ 81 (172)
T ss_dssp EEEEEEEE--TTEEEEEHHHHTTCCE---EE-TTEEE--CEEEEETTTTE--EEESSS------CCCC--CCCCSSSCEE
T ss_pred eeeeEEee--CCEEEeeeeecCCceE---EE-CCcEe--cceeehheece--eecCCc------cccC--cccCCCceEE
Confidence 36778776 4899999999988542 22 33322 12234445565 333332 1121 2233457777
Q ss_pred EEeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEe
Q 016647 232 AIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGIN 294 (385)
Q Consensus 232 ~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~ 294 (385)
++-.+-+.... ...|+..-. . .+...+.....+|.||+|++|.+|+|||+.
T Consensus 82 l~a~~Pgk~~~n~qt~Pg~f~~~----------~--GeigaI~lD~p~GtSGSPIin~~G~vVGLY 135 (172)
T 2fp7_B 82 MIVVEPGKNVKNVQTKPGVFKTP----------E--GEIGAVTLDYPTGTSGSPIVDKNGDVIGLY 135 (172)
T ss_dssp EEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCGGGTTCEEECTTSCEEEES
T ss_pred EEEECCCCceEEEEccCceEecC----------C--CeEEEEECCCCCCCCCCceEccCCcEEEEe
Confidence 77766554432 222332211 1 122333445568999999999999999984
No 338
>2ggv_B NS3, non-structural protein 3; beta barrel, serine protease, viral protease, flavivirus, hydrolase; 1.80A {West nile virus} PDB: 2ijo_B
Probab=93.59 E-value=0.11 Score=44.27 Aligned_cols=131 Identities=19% Similarity=0.207 Sum_probs=73.3
Q ss_pred hCCceEEEEEeeeccCccccccccCCCeEEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEE
Q 016647 125 NTPSVVNITNLAARQDAFTLDVLEVPQGSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVL 204 (385)
Q Consensus 125 ~~~SVV~I~~~~~~~~~~~~~~~~~~~~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlL 204 (385)
..+.|-+|....-- ...-.|-|+.- +|.+=|-.||-+++.- .. +++.+ .....|-..|+ +
T Consensus 17 l~dGvYRI~~~gl~----------G~~Q~GVGv~~--~GVFHTmWHVTrGa~L---~~-~g~~l--~P~wasV~~Dl--i 76 (185)
T 2ggv_B 17 TTTGVYRIMTRGLL----------GSYQAGAGVMV--EGVFHTLWATTKGAAL---MS-GEGRL--DPYWGSVKEDR--L 76 (185)
T ss_dssp CCSEEEEEEEECSS----------SEEEEEEEEEE--TTEEEECHHHHTTCCE---EE-TTEEE--CEEEEETTTTE--E
T ss_pred CCCcEEEEEecccc----------ccceeeeEEee--CCEEEeeeeecCcceE---EE-CCcEe--cceeehhhcce--e
Confidence 46788888663221 11235777776 4899999999988542 22 33332 22234445665 3
Q ss_pred EEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCc
Q 016647 205 RIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGG 281 (385)
Q Consensus 205 kv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGG 281 (385)
..-.+ -+|. ..-..+++|.++-++-+.... ...|++.-. . .++..+.....+|.||+
T Consensus 77 sYGG~------WkL~--~kW~g~~eVql~av~Pgk~~~nvQt~Pg~f~~~----------~--GeigAI~lD~p~GTSGS 136 (185)
T 2ggv_B 77 CYGGP------WQLQ--HKWNGQDEVQMIVVEPGRNVKNVQTKPGVFKTP----------E--GEIGAVTLDFPTGTSGS 136 (185)
T ss_dssp EESSS------CCCC--CCCCSSSCEEEEECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCGGGTTC
T ss_pred ecCCc------ccCc--cccCCCceEEEEEECCCCceEEEEccCceEecC----------C--CeEEEEECCCCCCCCCC
Confidence 33332 1121 223445777777776554432 122332211 1 12233344556899999
Q ss_pred eeeCCCccEEEEee
Q 016647 282 PLLDSSGSLIGINT 295 (385)
Q Consensus 282 Plvn~~G~VVGI~s 295 (385)
|++|.+|+|||+.-
T Consensus 137 PIin~~G~vvGLYG 150 (185)
T 2ggv_B 137 PIVDKNGDVIGLYG 150 (185)
T ss_dssp EEECTTSCEEEEEE
T ss_pred ceEcCCCcEEEEec
Confidence 99999999999863
No 339
>3lkw_A Fusion protein of nonstructural protein 2B and nonstructural protein 3; viral protease, serine protease, NS3 protease, NS2B cofactor; 2.00A {Dengue virus 1} PDB: 3l6p_A
Probab=93.11 E-value=0.2 Score=44.37 Aligned_cols=112 Identities=21% Similarity=0.332 Sum_probs=63.9
Q ss_pred EEEEEEEcCCCEEEecccccCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEE
Q 016647 153 SGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYA 232 (385)
Q Consensus 153 ~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~ 232 (385)
.|-|+.- +|.+=|-.||-+++.- .. +++.+ .....|-..|+ +..-.+ -+|. ..-...++|.+
T Consensus 86 ~GVGv~~--~GVFHTmWHVTrGa~l---~~-~g~~~--~P~wa~V~~Dl--isYGG~------WkL~--~~W~g~~eVqv 147 (236)
T 3lkw_A 86 VGVGVFQ--EGVFHTMWHVTRGAVL---MY-QGKRL--EPSWASVKKDL--ISYGGG------WRFQ--GSWNAGEEVQV 147 (236)
T ss_dssp EEEEEEE--TTEEEECHHHHTTCCE---EE-TTEEE--CEEEEETTTTE--EEESSS------CCCC--CCCCTTCCEEE
T ss_pred eeeEEee--CCEEEEeeeecCcceE---EE-CCcEe--cceeehheece--eecCCC------ccCC--cccCCCceEEE
Confidence 5777766 5899999999988541 22 23222 12234445665 333332 1221 11223477888
Q ss_pred EeCCCCCCCc---eEEeEEeeeeeeeccCCCCCCcccEEEEccccCCCCCCceeeCCCccEEEEe
Q 016647 233 IGNPFGLDHT---LTTGVISGLRREISSAATGRPIQDVIQTDAAINPGNSGGPLLDSSGSLIGIN 294 (385)
Q Consensus 233 iG~p~g~~~~---~~~G~Vs~~~~~~~~~~~~~~~~~~i~~d~~i~~G~SGGPlvn~~G~VVGI~ 294 (385)
+-++-+.... ...|++.-. . .+.-.+.-...+|.||+|++|.+|+|||+-
T Consensus 148 ~A~~Pg~~~~~~qt~PG~~~~~----------~--g~igav~lD~p~GTSGSPIin~~G~VvGLY 200 (236)
T 3lkw_A 148 IAVEPGKNPKNVQTAPGTFKTP----------E--GEVGAIALDFKPGTAGSPIVNREGKIVGLY 200 (236)
T ss_dssp EECCTTSCCEEEEECCEEEEET----------T--EEEEEECCCCCTTCTTCEEECTTSCEEEES
T ss_pred EEECCCCceEEEEeCCeEEEcC----------C--CeEEEEECCCCCCCCCCceecCCCcEEEEe
Confidence 8877665432 233443311 1 122333444558999999999999999984
No 340
>4ash_A NS6 protease; hydrolase, trypsin-like, calicivirus; 1.58A {Murine norovirus 1}
Probab=90.92 E-value=1.4 Score=36.62 Aligned_cols=135 Identities=17% Similarity=0.197 Sum_probs=72.0
Q ss_pred eEEEEEEEcCCCEEEecccccC-CCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCC-CCCcceecCCCCCCCCCCE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQK 229 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~l~l~~~~~~~~G~~ 229 (385)
+.|=||-|+.. ..+|+-||+. +.+++. | .+...+.++..-++..+++..+. .++.-..|... ...|+-
T Consensus 15 gsgwgfwVS~~-~fiTaTHV~p~~~~eif-----G--~p~~~i~v~~~GEf~~~rfp~~~rpdvsgmiLEeg--~peGtV 84 (185)
T 4ash_A 15 GTGWGFWVSGH-VFITAKHVAPPKGTEIF-----G--RKPGDFTVTSSGDFLKYYFTSAVRPDIPAMVLENG--CQEGVV 84 (185)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCCTTCCBT-----T--BCTTSEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTCE
T ss_pred cCceEEEEccc-EEEEEEeecCCCchhhc-----C--CccceEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCcE
Confidence 46779999987 9999999994 443321 1 11122334445578888887543 34555566432 234776
Q ss_pred EEEE-eCCCCCCC--ceEEeEEeeeeeeeccCCCCCCcccEEEE-------ccccCCCCCCceeeCCC---ccEEEEeec
Q 016647 230 VYAI-GNPFGLDH--TLTTGVISGLRREISSAATGRPIQDVIQT-------DAAINPGNSGGPLLDSS---GSLIGINTA 296 (385)
Q Consensus 230 V~~i-G~p~g~~~--~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGGPlvn~~---G~VVGI~s~ 296 (385)
+.++ -.+.+... .+.-|.+....-. .. .-.....++.+ |-...||+-|.|-+-.. --|+||+++
T Consensus 85 ~svlikR~sgeliPlavRmgt~as~kIq--Gk-~v~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgn~~vv~GVHtA 161 (185)
T 4ash_A 85 ASVLVKRASGEMLALAVRMGSQAAIKIG--SA-VVHGQTGMLLTGSNAKAQDLGTIPGDAGCPYVYKKGNTWVVIGVHVA 161 (185)
T ss_dssp EEEEEECTTCCEEEEEEEEEEEEEEEET--TE-EEEEEEEEECC-------CCSCCTTCTTCEEEEEETTEEEEEEEEEE
T ss_pred EEEEEecCCCCcceeEEEecceeeeEEe--ee-EecceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEe
Confidence 6553 34433321 2233333222110 00 00001112222 34456999999998543 459999987
Q ss_pred ccC
Q 016647 297 IYS 299 (385)
Q Consensus 297 ~~~ 299 (385)
...
T Consensus 162 atr 164 (185)
T 4ash_A 162 ATR 164 (185)
T ss_dssp ECS
T ss_pred ecc
Confidence 643
No 341
>1yph_E Chymotrypsin A, chain C; serine protease, hydrolase; 1.34A {Bos taurus} PDB: 1ca0_C 1cbw_C 1cho_G 1gct_C 1ab9_C* 1ggd_C* 1gha_G 1ghb_G* 1gmc_G 1gmd_G 1gmh_G 1hja_C 1mtn_C 1n8o_C 1vgc_C* 1gg6_C 2cha_C* 2gch_G 2gct_C 2gmt_C* ...
Probab=90.26 E-value=0.12 Score=39.70 Aligned_cols=26 Identities=38% Similarity=0.585 Sum_probs=20.3
Q ss_pred ccCCCCCCceeeCC-Cc--cEEEEeeccc
Q 016647 273 AINPGNSGGPLLDS-SG--SLIGINTAIY 298 (385)
Q Consensus 273 ~i~~G~SGGPlvn~-~G--~VVGI~s~~~ 298 (385)
..+.|+|||||+-. +| .++||++++.
T Consensus 41 ~~C~GDSGGPL~~~~~~~~~l~GIvS~g~ 69 (97)
T 1yph_E 41 SSCMGDSGGPLVCKKNGAWTLVGIVSWGS 69 (97)
T ss_dssp BCCTTCTTCEEEEEETTEEEEEEEEEECC
T ss_pred CCCcCCCCCcEEEEeCCeEEEEEEEEeCC
Confidence 46789999999842 22 7999999864
No 342
>1wxr_A Haemoglobin protease; hemoglobine protease, autotransporter, beta helix, heme uptake, spate, hydrolase; 2.20A {Escherichia coli} PDB: 3ak5_A
Probab=89.98 E-value=0.64 Score=50.39 Aligned_cols=80 Identities=16% Similarity=0.215 Sum_probs=50.7
Q ss_pred eEEEEEEEcCCCEEEecccccCCCCeEEEEecCC-CeEeeEEEEE-CCCCCeEEEEEcCCCCCCcceecCCCC-------
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIRGASDIRVTFADQ-SAYDAKIVGF-DQDKDVAVLRIDAPKDKLRPIPIGVSA------- 222 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~~~~~i~V~~~dg-~~~~a~vv~~-d~~~DlAlLkv~~~~~~~~~l~l~~~~------- 222 (385)
..|.+.+|++. ||+|.+|... .. .|.|.++ ..|.. +... .+..|+++.|++.......|+.+....
T Consensus 56 ~~G~aTLI~pq-YiVSvaHn~g-y~--~v~fG~~~n~Y~i-V~rnn~~~~Dy~~pRL~K~VTEvaP~~~t~~g~~~~~y~ 130 (1048)
T 1wxr_A 56 EIGVATLINPQ-YIASVKHNGG-YT--NVSFGDGENRYNI-VDRNNAPSLDFHAPRLDKLVTEVAPTAVTAQGAVAGAYL 130 (1048)
T ss_dssp TTCCCEEEETT-EEEBCTTCCS-CC--EECCTTSCCCEEE-EECCBCSSSSCBCCEESSCCCSSCCCCBCSSCSCTTGGG
T ss_pred CCceEEEEcCc-EEEEeeecCC-Cc--eEEeCCCcceEEE-EeeCCCCCCCeeeeecccccccccceeeccccCcccccc
Confidence 46889999987 9999999643 22 4556554 35644 2222 234599999998765555565553321
Q ss_pred CCCCCCEEEEEeCC
Q 016647 223 DLLVGQKVYAIGNP 236 (385)
Q Consensus 223 ~~~~G~~V~~iG~p 236 (385)
+.+.....+-+|..
T Consensus 131 d~ery~~f~RvGsG 144 (1048)
T 1wxr_A 131 DKERYPVFYRLGSG 144 (1048)
T ss_dssp CTTTCCCEEEEECS
T ss_pred ccccCceEEEECCc
Confidence 14556666777754
No 343
>4agk_A Capsid protein, coat protein, C; hydrolase, viral protein; 1.81A {Aura virus} PDB: 4agj_A 1kxa_A 2snw_A 1svp_A 1kxb_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=89.84 E-value=0.19 Score=40.63 Aligned_cols=28 Identities=39% Similarity=0.615 Sum_probs=23.6
Q ss_pred ccccCCCCCCceeeCCCccEEEEeeccc
Q 016647 271 DAAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 271 d~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
...-.+|+||-|++|..|+||+|+-.+.
T Consensus 101 ~g~g~~GdSGrPi~Dn~GrVVaIVlGG~ 128 (158)
T 4agk_A 101 TGAGGPGDSGRPILDNSGKVVAIVLGGA 128 (158)
T ss_dssp TTSSCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred cccCCCCCCCCccccCCCCEEEEEecCC
Confidence 3445689999999999999999997654
No 344
>2yew_A Capsid protein, coat protein; alphavirus, molecular dynamics; 5.00A {Barmah forest virus}
Probab=89.67 E-value=0.21 Score=44.00 Aligned_cols=27 Identities=30% Similarity=0.593 Sum_probs=23.0
Q ss_pred cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 272 AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 272 ~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
..-.+|+||-|+||..|+||+|+-.+.
T Consensus 198 G~G~~GDSGRpI~DN~GrVVaIVLGGa 224 (253)
T 2yew_A 198 GSGKPGDSGRPIFDNTGKVVAIVLGGA 224 (253)
T ss_dssp TSCCSSCTTCEEECSSCBEEEEEEEEE
T ss_pred CCCCCCCCCCccccCCCcEEEEEecCC
Confidence 344589999999999999999997764
No 345
>1vcp_A Semliki forest virus capsid protein; virus coat protein, polyprotein, transmembrane, glycoprotein, nucleocapsid protein, viral protein; 3.00A {Semliki forest virus} SCOP: b.47.1.3 PDB: 1dyl_A 1vcq_A
Probab=89.63 E-value=0.24 Score=39.59 Aligned_cols=28 Identities=32% Similarity=0.567 Sum_probs=23.5
Q ss_pred ccccCCCCCCceeeCCCccEEEEeeccc
Q 016647 271 DAAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 271 d~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
...-.+|+||-|++|..|+||+|+-.+.
T Consensus 93 ~G~g~~GdSGrpI~Dn~GrVVaIVlGG~ 120 (149)
T 1vcp_A 93 TGAGKPGDSGRPIFDNKGRVVAIVLGGA 120 (149)
T ss_dssp TTSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred ccCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 3445689999999999999999997654
No 346
>1svp_A Sindbis virus capsid protein; chymotrypsin-like serine, mutant, coat protein, viral protein; 2.00A {Sindbis virus} SCOP: b.47.1.3 PDB: 1kxb_A 1kxa_A 2snw_A 1kxc_A 1kxd_A 1kxe_A 2snv_A 1z8y_Q 1wyk_A
Probab=89.37 E-value=0.25 Score=40.08 Aligned_cols=27 Identities=26% Similarity=0.473 Sum_probs=22.9
Q ss_pred cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 272 AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 272 ~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
..-.+|+||-|++|..|+||+|+-.+.
T Consensus 103 GvG~~GDSGRpI~DN~GrVVaivlgg~ 129 (161)
T 1svp_A 103 GVGGRGDAGRPIMDNSGRVVAIVLGGA 129 (161)
T ss_dssp TSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred cCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 344589999999999999999997664
No 347
>1ep5_B Capsid protein C, coat protein C; beta barrel, hydrolase; 2.30A {Venezuelan equine encephalitis virus} SCOP: b.47.1.3 PDB: 1ep6_A 3j0c_C
Probab=88.87 E-value=0.43 Score=38.60 Aligned_cols=28 Identities=29% Similarity=0.474 Sum_probs=23.5
Q ss_pred ccccCCCCCCceeeCCCccEEEEeeccc
Q 016647 271 DAAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 271 d~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
...-.+|+||-|++|..|+||+|+-.+.
T Consensus 100 ~G~g~~GdSGrpI~Dn~GrVVaIVlGGa 127 (157)
T 1ep5_B 100 KGVGAKGDSGRPILDNQGRVVAIVLGGV 127 (157)
T ss_dssp TTCCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred cCCCCCCCCCCccCcCCCcEEEEEecCC
Confidence 3445689999999999999999997653
No 348
>1kxf_A Sindbis virus capsid protein; chymotrypsin-like serine proteinase, wild type, viral protein; 2.38A {Sindbis virus} SCOP: b.47.1.3 PDB: 1ld4_A 3j0f_A
Probab=88.21 E-value=0.26 Score=43.81 Aligned_cols=27 Identities=30% Similarity=0.486 Sum_probs=23.0
Q ss_pred cccCCCCCCceeeCCCccEEEEeeccc
Q 016647 272 AAINPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 272 ~~i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
..-.+|+||-|++|..|+||+|+-.+.
T Consensus 208 G~G~~GDSGRpI~DN~GrVVaIVLGGa 234 (264)
T 1kxf_A 208 GVGGRGDSGRPIMDNSGRVVAIVLGGA 234 (264)
T ss_dssp TSCCTTCTTCEEECTTSCEEEEEEEEE
T ss_pred cCCCCCCCCCccccCCCcEEEEEecCC
Confidence 344589999999999999999997663
No 349
>2fyq_A Chymotrypsin-like cysteine proteinase; protease, norovirus, calicivirus, viral protein; 1.50A {Norwalk virus} PDB: 2fyr_A 2iph_A* 1wqs_A*
Probab=85.12 E-value=5.1 Score=33.41 Aligned_cols=135 Identities=19% Similarity=0.253 Sum_probs=70.4
Q ss_pred eEEEEEEEcCCCEEEecccccC-CCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCC-CCCcceecCCCCCCCCCCE
Q 016647 152 GSGSGFVWDSKGHVVTNYHVIR-GASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPK-DKLRPIPIGVSADLLVGQK 229 (385)
Q Consensus 152 ~~GSGfiI~~~G~ILT~aHvv~-~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~-~~~~~l~l~~~~~~~~G~~ 229 (385)
+.|=||-|++. .++|+-||+. +.+++. | .+...+.++..-++..+++..+. .++.-..|... ...|+-
T Consensus 26 gsgwgfwVS~~-~fIT~tHV~p~~~~e~f-----G--~p~~~i~v~~~GEf~~~rfpk~~rpdvsgmiLEeg--~peGtV 95 (194)
T 2fyq_A 26 GSGWGFWVSPT-VFITTTHVVPTGVKEFF-----G--EPLSSIAIHQAGEFTQFRFSKKMRPDLTGMVLEEG--CPEGTV 95 (194)
T ss_dssp TTEEEEESSSS-EEEEEGGGSCSSCSEET-----T--EEGGGEEEEEETTEEEEEESSCSCTTSCCCEECSS--CCTTCE
T ss_pred cCceeEEEccc-EEEEEeeecCCCChhhc-----C--ceeeeEEEeecCcEEEEEcCCCcCCCCcceEEecC--CCCCcE
Confidence 46779999987 9999999994 444321 1 11222334445578888886542 34455556432 234766
Q ss_pred EEE-EeCCCCCC--CceEEeEEeeeeeeeccCCCCCCcccEEEE-------ccccCCCCCCceeeCCC---ccEEEEeec
Q 016647 230 VYA-IGNPFGLD--HTLTTGVISGLRREISSAATGRPIQDVIQT-------DAAINPGNSGGPLLDSS---GSLIGINTA 296 (385)
Q Consensus 230 V~~-iG~p~g~~--~~~~~G~Vs~~~~~~~~~~~~~~~~~~i~~-------d~~i~~G~SGGPlvn~~---G~VVGI~s~ 296 (385)
+.+ +-.+.+.. ..+..|.+....-.-.. -.....++.+ |-...||+-|.|-+-.. --|+||+.+
T Consensus 96 ~silikR~sgellPlaVRmgt~as~kIqGk~---v~gqtGmlltganaK~mdLGT~PGDCGcPYvykrgndwvv~GVH~A 172 (194)
T 2fyq_A 96 CSVLIKRDSGELLPLAVRMGAIASMRIQGRL---VHGQSGMLLTGANAKGMDLGTIPGDCGAPYVHKRGNDWVVCGVHAA 172 (194)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEEEEEETTEE---EEEEEEEECC-----------CGGGTTCEEEEEETTEEEEEEEEEE
T ss_pred EEEEEecCCCCcceEEEEecceeeeEEeeeE---ecceeeeEEecCCcccCcCCCCCCCCCCceEEeeCCceEEEEEEEe
Confidence 544 34444432 12333333322211000 0001122222 33456899999998543 359999987
Q ss_pred ccC
Q 016647 297 IYS 299 (385)
Q Consensus 297 ~~~ 299 (385)
...
T Consensus 173 atr 175 (194)
T 2fyq_A 173 ATK 175 (194)
T ss_dssp ECS
T ss_pred ecc
Confidence 644
No 350
>3su6_A NS3 protease, NS4A protein; drug resistance, drug design, protease inhibitors, serine PR viral protein, hydrolase-inhibitor complex; HET: SU3; 1.10A {Hepatitis c virus} PDB: 3su2_A* 3sv9_A* 3m5l_A* 3m5m_A* 3m5n_A 3m5o_A 3rc4_A 3rc5_A 3rc6_A 3su3_A* 3su4_A* 3sv6_A* 3sv7_A* 3su1_A* 3su5_A* 3sv8_A* 3su0_A* 2p59_A* 2qv1_A 1a1q_A ...
Probab=69.75 E-value=1.9 Score=36.88 Aligned_cols=25 Identities=36% Similarity=0.610 Sum_probs=21.0
Q ss_pred cCCCCCCceeeCCCccEEEEeeccc
Q 016647 274 INPGNSGGPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 274 i~~G~SGGPlvn~~G~VVGI~s~~~ 298 (385)
...|.||||++-.+|.+|||.-+..
T Consensus 155 ~lkGSSGgPvLC~~GHaVGmf~aav 179 (203)
T 3su6_A 155 YLKGSAGGPLLCPAGHAVGIFRTAV 179 (203)
T ss_dssp GTTTCTTCEEECTTSCEEEEEEEEE
T ss_pred eccCCCCCceecCCCCEEEEEEEEE
Confidence 3589999999999999999975443
No 351
>3s6n_G Small nuclear ribonucleoprotein G; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_G 2y9c_G 2y9d_G 3cw1_G 3pgw_G* 2y9a_G
Probab=56.01 E-value=32 Score=24.76 Aligned_cols=33 Identities=9% Similarity=0.161 Sum_probs=29.3
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+|+.+.+++.++|...++.+=....
T Consensus 15 k~V~V~Lk~gr~~~G~L~~~D~~mNlvL~~~~e 47 (76)
T 3s6n_G 15 KKLSLKLNGGRHVQGILRGFDPFMNLVIDECVE 47 (76)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCcceEEEeceEE
Confidence 468999999999999999999999998877754
No 352
>1i4k_A Putative snRNP SM-like protein; core snRNP domain, RNA binding protein; HET: CIT; 2.50A {Archaeoglobus fulgidus} SCOP: b.38.1.1 PDB: 1i5l_A*
Probab=53.63 E-value=23 Score=25.45 Aligned_cols=33 Identities=15% Similarity=0.367 Sum_probs=29.3
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+|+.+.+++.++|...++.+=.+..
T Consensus 15 ~~V~V~L~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (77)
T 1i4k_A 15 SPVIVRLKGGREFRGTLDGYDIHMNLVLLDAEE 47 (77)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCCEEEEEEEEEcCCCCeEEeeEEE
Confidence 468999999999999999999999998877754
No 353
>1h64_1 SnRNP SM-like protein; SM fold, spliceosome, snRNP core; 1.9A {Pyrococcus abyssi} SCOP: b.38.1.1 PDB: 1m8v_A*
Probab=52.66 E-value=22 Score=25.46 Aligned_cols=33 Identities=15% Similarity=0.412 Sum_probs=29.2
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.||+.+.+++.++|...++.+=.+..
T Consensus 15 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 47 (75)
T 1h64_1 15 KDVLVILKKGFEFRGRLIGYDIHLNVVLADAEM 47 (75)
T ss_dssp SEEEEEETTSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEeCCCCeEEeeEEE
Confidence 468999999999999999999999998877754
No 354
>1d3b_B Protein (small nuclear ribonucleoprotein associat B); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_A 2y9b_A 2y9c_A 2y9d_A
Probab=52.44 E-value=21 Score=26.68 Aligned_cols=33 Identities=15% Similarity=0.300 Sum_probs=29.1
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.||+.+.+.+.++|...+|.|=....
T Consensus 15 k~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 47 (91)
T 1d3b_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCDE 47 (91)
T ss_dssp SEEEEEETTCCEEEEEEEECCTTCCEEEEEEEE
T ss_pred CcEEEEECCCeEEEEEEEEECCCCeEEecCEEE
Confidence 468999999999999999999999998876643
No 355
>1th7_A SnRNP-2, small nuclear riboprotein protein; archaea, SM protein, SM fold, SS-SM1, RNA binding protein; 1.68A {Sulfolobus solfataricus} SCOP: b.38.1.1
Probab=51.49 E-value=23 Score=25.81 Aligned_cols=33 Identities=9% Similarity=0.190 Sum_probs=29.5
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.||+.+.+++.++|...++.+=.+..
T Consensus 20 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 52 (81)
T 1th7_A 20 NLVLVKLKGNKEVRGMLRSYDQHMNLVLSDSEE 52 (81)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCCEEEccEEE
Confidence 468999999999999999999999998877754
No 356
>4hcz_A PHD finger protein 1; protein-peptide complex, tudor, histone binding, H3K36ME3, N nucleus, transcription; HET: M3L; 1.85A {Homo sapiens}
Probab=50.41 E-value=51 Score=22.64 Aligned_cols=38 Identities=16% Similarity=0.340 Sum_probs=32.7
Q ss_pred cCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCC
Q 016647 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (385)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (385)
+...+.+.++-.||+-|.++++.++...+-++++++..
T Consensus 4 f~~GedVLarwsDG~fYlGtI~~V~~~~~~clV~F~D~ 41 (58)
T 4hcz_A 4 LWEGQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 41 (58)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTS
T ss_pred cccCCEEEEEecCCCEEeEEEEEEecCCCEEEEEEcCC
Confidence 34456788889999999999999999999999999764
No 357
>1mgq_A SM-like protein; LSM, RNA-binding, archea, RNA binding protein; 1.70A {Methanothermobacterthermautotrophicus} SCOP: b.38.1.1 PDB: 1i81_A 1loj_A* 1jbm_A 1jri_A
Probab=48.59 E-value=27 Score=25.60 Aligned_cols=33 Identities=9% Similarity=0.269 Sum_probs=29.2
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.||+.+.+++.++|...++.|=.+..
T Consensus 26 ~~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e 58 (83)
T 1mgq_A 26 SPVIIKLKGDREFRGVLKSFDLHMNLVLNDAEE 58 (83)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEcCCcEEEEEEEEECCCceeEEccEEE
Confidence 469999999999999999999999998877754
No 358
>1d3b_A Protein (small nuclear ribonucleoprotein SM D3); snRNP, splicing, core snRNP domain, systemic lupus eryth SLE, RNA binding protein; HET: CIT; 2.00A {Homo sapiens} SCOP: b.38.1.1
Probab=47.39 E-value=34 Score=24.58 Aligned_cols=33 Identities=9% Similarity=0.203 Sum_probs=29.4
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+|++|.+++.++|...++.+=.+..
T Consensus 16 ~~V~VeLk~g~~~~G~L~~~D~~MNl~L~~~~e 48 (75)
T 1d3b_A 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITV 48 (75)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEEccceeEEEEeEEE
Confidence 468999999999999999999999998887754
No 359
>3s6n_F Small nuclear ribonucleoprotein F; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_F 2y9c_F 2y9d_F 3cw1_F 3pgw_F* 2y9a_F
Probab=46.88 E-value=33 Score=25.40 Aligned_cols=59 Identities=15% Similarity=0.122 Sum_probs=38.7
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNP 236 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p 236 (385)
..+.|.+.+|+.+.+++.++|...++.+=.+......-....++ .-+-.|+.|..++-|
T Consensus 17 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~e~~~g~~~~~lg--~v~IRG~nI~~i~~~ 75 (86)
T 3s6n_F 17 KPVMVKLKWGMEYKGYLVSVDGYMNMQLANTEEYIDGALSGHLG--EVLIRCNNVLYIRGV 75 (86)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEEEETTEEEEEES--SEEECGGGEEEEEEC
T ss_pred CeEEEEEcCCeEEEEEEEEEcCceEEEEeeEEEEcCCceeeEcc--EEEEeCCeEEEEEeC
Confidence 46899999999999999999999999887765311111122222 123446666666544
No 360
>1ljo_A Archaeal SM-like protein AF-SM2; snRNP, core snRNP domain, RNA binding protein, unknown F; 1.95A {Archaeoglobus fulgidus} SCOP: b.38.1.1
Probab=46.72 E-value=36 Score=24.46 Aligned_cols=33 Identities=18% Similarity=0.210 Sum_probs=29.1
Q ss_pred CeEEEEecCC-CeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+| +.+.+++.++|...++.+=.+..
T Consensus 16 ~~v~V~lk~g~~~~~G~L~~~D~~mNlvL~d~~e 49 (77)
T 1ljo_A 16 KIIRVEMKGEENQLVGKLEGVDDYMNLYLTNAME 49 (77)
T ss_dssp SEEEEEETTCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEEeCCCEEEEEEEEEECCcceEEEeeEEE
Confidence 4689999999 99999999999999998877754
No 361
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=46.46 E-value=11 Score=31.17 Aligned_cols=22 Identities=32% Similarity=0.501 Sum_probs=19.2
Q ss_pred CCCCCceeeCCCccEEEEeecc
Q 016647 276 PGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
.+.++-|++|.+|+++|+++..
T Consensus 47 ~~~~~~pVvd~~g~lvGiit~~ 68 (170)
T 4esy_A 47 HQIGCAPVVDQNGHLVGIITES 68 (170)
T ss_dssp TTCSEEEEECTTSCEEEEEEGG
T ss_pred cCCeEEEEEcCCccEEEEEEHH
Confidence 5778999999999999999853
No 362
>4emk_B U6 snRNA-associated SM-like protein LSM6; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_B
Probab=46.40 E-value=26 Score=25.17 Aligned_cols=32 Identities=13% Similarity=0.271 Sum_probs=28.1
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEc
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (385)
..+.|.+.+|+.+.+++.++|...++.+=.+.
T Consensus 15 k~V~V~Lk~g~~~~G~L~~~D~~mNlvL~d~~ 46 (75)
T 4emk_B 15 KKVLIRLSSGVDYKGILSCLDGYMNLALERTE 46 (75)
T ss_dssp SEEEEECTTSCEEEEEEEEECTTCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCcceEEEccEE
Confidence 56899999999999999999999998776654
No 363
>4emg_A Probable U6 snRNA-associated SM-like protein LSM3; SM fold, mRNA decay, LSM proteins, RNA binding protein; 2.70A {Schizosaccharomyces pombe}
Probab=45.99 E-value=31 Score=26.04 Aligned_cols=33 Identities=6% Similarity=0.232 Sum_probs=29.1
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 20 ~~V~V~l~~gr~~~G~L~~~D~~mNlvL~d~~E 52 (93)
T 4emg_A 20 EIVYVKLRGDRELNGRLHAYDEHLNMVLGDAEE 52 (93)
T ss_dssp SEEEEEETTTEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CEEEEEECCCcEEEEEEEEECCcccEEeecEEE
Confidence 578999999999999999999999998877653
No 364
>1i8f_A Putative snRNP SM-like protein; beta barrel-like SMAP monomers form 35-stranded beta-sheet I heptamer, structural genomics; 1.75A {Pyrobaculum aerophilum} SCOP: b.38.1.1 PDB: 1lnx_A*
Probab=45.64 E-value=26 Score=25.53 Aligned_cols=33 Identities=15% Similarity=0.270 Sum_probs=29.1
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+|+.+.+++.++|...++.+=.+..
T Consensus 22 ~~V~V~l~~g~~~~G~L~~~D~~mNlvL~d~~e 54 (81)
T 1i8f_A 22 KQVLVKLRDSHEIRGILRSFDQHVNLLLEDAEE 54 (81)
T ss_dssp SEEEEEEGGGEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEEcCCcEEEEEEEEEcCCCeeEEccEEE
Confidence 478999999999999999999999998877654
No 365
>4emk_C U6 snRNA-associated SM-like protein LSM7; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_C
Probab=45.29 E-value=33 Score=26.92 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=29.1
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.||+.+.+.+.++|...+|.|=.+..
T Consensus 34 k~V~V~L~dGr~~~G~L~~fD~~mNLVL~d~~E 66 (113)
T 4emk_C 34 QRIQATFTGGRQITGILKGFDQLMNLVLDDVEE 66 (113)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEeCCeEEEEEEEEEcCcccEEEeeEEE
Confidence 468999999999999999999999998877653
No 366
>3dor_A Protein CT_858, CPAF; mature CPAF, dimer, transferase; 2.20A {Chlamydia trachomatis} PDB: 3dpm_A* 3dpn_A 3dja_A
Probab=45.22 E-value=18 Score=36.74 Aligned_cols=56 Identities=18% Similarity=0.223 Sum_probs=37.5
Q ss_pred CCCCCcEEEEECCEEeCCHHHHH-------------HHHhc---------C-CCCCEEEEEEEE-CCEEEEEEEEeecCC
Q 016647 327 RLILGDIITSVNGKKVSNGSDLY-------------RILDQ---------C-KVGDEVIVEVLR-GDQKEKIPVKLEPKP 382 (385)
Q Consensus 327 gl~~GDiI~~ing~~i~s~~~l~-------------~~l~~---------~-~~g~~v~l~v~R-~g~~~~~~v~~~~~~ 382 (385)
+++.||.|++|||+++..+-+-. .+++. . -|-+.++|++.| +|+.+++++.-...|
T Consensus 109 ~I~vGdEIlsING~pv~e~Lek~~~~~Gsn~~a~~~~Al~~Lt~R~~~l~~~~p~~~~tlk~~~~~G~~~~v~~pW~~~p 188 (583)
T 3dor_A 109 EIRVGDELLEVDGAPVQDVLATLYGSNHKGTAAEESAALRTLFSRMASLGHKVPSGRTTLKIRRPFGTTREVRVKWRYVP 188 (583)
T ss_dssp SSCTTCEEEEETTEEHHHHHHTTSCTTCCCCHHHHHHHHHHHTEEEGGGTCCCCCSEEEEEEECTTSCEEEEEEECEEEC
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHhcCCCcHHHHHHHHHHHhhhHHhhccCCCCCceEEEEECCCCcEEEEEeeeEEcc
Confidence 69999999999999997543311 11111 1 234588999866 688888887754443
No 367
>3bw1_A SMX4 protein, U6 snRNA-associated SM-like protein LSM3; RNA-binding protein, SM protein, ring, HOMO octamer, mRNA processing; 2.50A {Saccharomyces cerevisiae}
Probab=45.09 E-value=29 Score=26.31 Aligned_cols=32 Identities=6% Similarity=0.171 Sum_probs=28.7
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEc
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (385)
..+.|.+.+|+.+.+.+.++|...++.|=...
T Consensus 21 k~V~V~Lk~gr~~~G~L~~fD~~mNlVL~d~~ 52 (96)
T 3bw1_A 21 ERVYIKLRGARTLVGTLQAFDSHCNIVLSDAV 52 (96)
T ss_dssp SEEEEEEGGGCEEEEEEEEECTTCCEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEECCCCcEEEcCEE
Confidence 46999999999999999999999999887664
No 368
>4emk_A U6 snRNA-associated SM-like protein LSM5; SM fold, mRNA decay and PRE-mRNA splicing, LSM proteins, RNA protein; 2.30A {Schizosaccharomyces pombe} PDB: 3swn_A
Probab=44.90 E-value=33 Score=26.01 Aligned_cols=33 Identities=18% Similarity=0.464 Sum_probs=28.8
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+|+.+.+++.++|...++.|=.+..
T Consensus 31 k~V~V~Lk~gr~~~G~L~gfD~~mNlvL~d~~E 63 (94)
T 4emk_A 31 SNLWVIMKSEREFAGTLVGFDDYVNIVLKDVTE 63 (94)
T ss_dssp SEEEEEESSSEEEEEEEEEECTTCCEEEEEEEE
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeeeEEE
Confidence 469999999999999999999999998766643
No 369
>1y96_A Gemin6, SIP2, GEM-associated protein 6; SM fold, protein complex, RNA binding protein; 2.00A {Homo sapiens}
Probab=44.66 E-value=47 Score=24.79 Aligned_cols=32 Identities=16% Similarity=0.399 Sum_probs=28.0
Q ss_pred CeEEEEecCCCeEeeEEEEECC-CCCeEEEEEc
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQ-DKDVAVLRID 207 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~-~~DlAlLkv~ 207 (385)
..+.|.+.||+.|.+.+..+|+ ...|.|+...
T Consensus 18 KeV~V~l~dg~~y~G~l~tvDp~s~sIvL~n~~ 50 (86)
T 1y96_A 18 KEVRVTASEKNEYKGWVLTTDPVSANIVLVNFL 50 (86)
T ss_dssp CEEEEEETTTEEEEEEEEEECTTTCCEEEEEEC
T ss_pred CEEEEEEcCCCEEEEEEEEECCCceEEEEeecc
Confidence 4689999999999999999995 5699998873
No 370
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=44.05 E-value=49 Score=26.10 Aligned_cols=61 Identities=10% Similarity=0.199 Sum_probs=41.9
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCCC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPFG 238 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~g 238 (385)
..+.|.+.+|+.|.+++..+|...++.|=.+......-....++ .-+-.|+.|..+.-|..
T Consensus 13 k~V~V~Lk~g~~~~G~L~~~D~~MNlvL~d~~e~~~~~~~~~lg--~v~IRG~nI~~I~~pd~ 73 (119)
T 1b34_A 13 ETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPVQLE--TLSIRGNNIRYFILPDS 73 (119)
T ss_dssp CEEEEEETTCCEEEEEEEEECTTCCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCTT
T ss_pred CEEEEEEcCCCEEEEEEEEEcccceEEeccEEEecCCCceeEcc--eEEEcCCeEEEEEeccc
Confidence 46899999999999999999999999887775421111223332 12345777777776644
No 371
>1b34_B Protein (small nuclear ribonucleoprotein SM D2); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_C 2y9b_C 2y9c_C 2y9d_C 3cw1_C 3pgw_Y* 3s6n_B
Probab=42.92 E-value=37 Score=26.79 Aligned_cols=34 Identities=6% Similarity=0.261 Sum_probs=30.2
Q ss_pred CCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 175 ASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 175 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
...+.|.+.+|+.+.+.+.++|...++.|=.+..
T Consensus 39 ~k~V~V~Lk~gr~~~G~L~~fD~~mNlvL~d~~E 72 (118)
T 1b34_B 39 NTQVLINCRNNKKLLGRVKAFDRHCNMVLENVKE 72 (118)
T ss_dssp TCEEEEEETTSCEEEEEEEEECTTCCEEEEEEEE
T ss_pred CcEEEEEECCCcEEEEEEEEeCCceEEEEeCEEE
Confidence 3579999999999999999999999998877754
No 372
>4emh_A Probable U6 snRNA-associated SM-like protein LSM4; SM fold, mRNA decay, PRE-mRNA splicing, LSM proteins, RNA BI protein; 2.20A {Schizosaccharomyces pombe}
Probab=39.30 E-value=48 Score=25.65 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=28.8
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEc
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (385)
..+.|.+.+|+.|.+++.++|...++.|=.+.
T Consensus 27 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~ 58 (105)
T 4emh_A 27 RPILVELKNGETFNGHLENCDNYMNLTLREVI 58 (105)
T ss_dssp CEEEEEETTSCEEEEEEEEECTTCCEEEEEEE
T ss_pred CEEEEEECCCCEEEEEEEEEcCCceEEEEEEE
Confidence 46899999999999999999999999887765
No 373
>3pgw_B SM B; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_A
Probab=39.16 E-value=30 Score=30.77 Aligned_cols=32 Identities=16% Similarity=0.310 Sum_probs=27.7
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEc
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRID 207 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~ 207 (385)
.++.|++.||+++.+++..+|.+.+|.|=.+.
T Consensus 15 KrV~V~LkdGRel~GtLkgFDq~MNLVL~Da~ 46 (231)
T 3pgw_B 15 YRMRCILQDGRIFIGTFKAFDKHMNLILCDCD 46 (231)
T ss_pred CeEEEEECCCcEEEEEEEEEcccccEEecCEE
Confidence 46899999999999999999999998776554
No 374
>2eqj_A Metal-response element-binding transcription factor 2; structure genomics,tudor domain, zinc-regulated factor 1, ZIRF1; NMR {Mus musculus}
Probab=39.14 E-value=86 Score=22.12 Aligned_cols=38 Identities=13% Similarity=0.191 Sum_probs=32.0
Q ss_pred cCCCCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCC
Q 016647 172 IRGASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (385)
Q Consensus 172 v~~~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (385)
+...+.+..+..||..|+|+++.++....-+++++...
T Consensus 14 f~vGddVLA~wtDGl~Y~gtI~~V~~~~gtC~V~F~D~ 51 (66)
T 2eqj_A 14 FEEGQDVLARWSDGLFYLGTIKKINILKQSCFIIFEDS 51 (66)
T ss_dssp SCTTCEEEEECTTSCEEEEEEEEEETTTTEEEEEETTT
T ss_pred ccCCCEEEEEEccCcEEEeEEEEEccCCcEEEEEEccC
Confidence 33445677888999999999999999999999999763
No 375
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=38.35 E-value=17 Score=29.76 Aligned_cols=22 Identities=9% Similarity=0.154 Sum_probs=18.8
Q ss_pred CCCCCCceeeCCCccEEEEeec
Q 016647 275 NPGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 275 ~~G~SGGPlvn~~G~VVGI~s~ 296 (385)
..|.|+-|++|.+|+++|+++.
T Consensus 45 ~~~~s~~pVvd~~~~lvGiit~ 66 (156)
T 3k6e_A 45 QMTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp TSSSSEEEEECC-CBEEEEEEH
T ss_pred HcCCcEEEEEcCCCcEEEEEEe
Confidence 4788999999999999999984
No 376
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=37.76 E-value=50 Score=25.52 Aligned_cols=45 Identities=18% Similarity=0.287 Sum_probs=30.2
Q ss_pred EeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCC-CCCCCCEEEE-EeC
Q 016647 188 YDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSA-DLLVGQKVYA-IGN 235 (385)
Q Consensus 188 ~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~-~~~~G~~V~~-iG~ 235 (385)
++++++.++...++|++.+... ...+.+.--. ++++||+|.+ +||
T Consensus 26 IP~kVveI~~~~~~A~Vd~~Gv---~reV~l~Lv~e~~~vGDyVLVHvGf 72 (103)
T 3d3r_A 26 IPSQVVAVDNERQSVTVDTLGV---RRDVSSHLMTEPLAIGDYVLIHIGF 72 (103)
T ss_dssp CCEEEEEEETTTTEEEEEETTE---EEEEECTTBSSCCCTTCEEEEEEEE
T ss_pred cCEEEEEEeCCCCEEEEEcCCE---EEEEEEEeecCCCCCCCEEEEeech
Confidence 5788998875558999988652 2333433222 4788999977 565
No 377
>1n9r_A SMF, small nuclear ribonucleoprotein F, snRNP-F, SM protein F; heptamer, translation; 2.80A {Saccharomyces cerevisiae} SCOP: b.38.1.1 PDB: 1n9s_A
Probab=37.08 E-value=45 Score=25.13 Aligned_cols=33 Identities=12% Similarity=0.215 Sum_probs=29.1
Q ss_pred CeEEEEecCC-CeEeeEEEEECCCCCeEEEEEcC
Q 016647 176 SDIRVTFADQ-SAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 176 ~~i~V~~~dg-~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
..+.|.+.+| +.+.+++.++|...++.|=.+..
T Consensus 32 k~V~V~Lk~g~~~~~G~L~~~D~~MNlvL~d~~E 65 (93)
T 1n9r_A 32 HRVGVKLKFNSTEYRGTLVSTDNYFNLQLNEAEE 65 (93)
T ss_dssp SEEEEEESSTTEEEEEEEEECCTTTCEEEEEEEE
T ss_pred CEEEEEEcCCCEEEEEEEEEEccccEEEEeeEEE
Confidence 5799999999 99999999999999998777653
No 378
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=34.63 E-value=20 Score=29.28 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.4
Q ss_pred ceeeCCCccEEEEeec
Q 016647 281 GPLLDSSGSLIGINTA 296 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~ 296 (385)
-|++|.+|+++||++.
T Consensus 118 lpVVd~~g~l~GiiT~ 133 (156)
T 3k6e_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEEH
T ss_pred eEEEecCCEEEEEEEH
Confidence 6899999999999984
No 379
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=34.00 E-value=21 Score=27.56 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=16.5
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (127)
T 3nqr_A 98 RYHMAIVIDEFGGVSGLVTI 117 (127)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44567899999999999975
No 380
>2fwk_A U6 snRNA-associated SM-like protein LSM5; structural genomics, structural genomics consortium, SGC, DNA binding protein; 2.14A {Cryptosporidium parvum} SCOP: b.38.1.1 PDB: 3pgg_A
Probab=33.89 E-value=39 Score=26.78 Aligned_cols=31 Identities=16% Similarity=0.364 Sum_probs=27.4
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEE
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRI 206 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv 206 (385)
..+.|.+.+|+.+.+++.++|...++.|=.+
T Consensus 39 k~V~V~Lk~Gr~~~G~L~~fD~~mNlVL~d~ 69 (121)
T 2fwk_A 39 NRIYVVMKGDKEFSGVLRGFDEYVNMVLDDV 69 (121)
T ss_dssp SBCEEEETTTEEECCEEEEECTTCCEEEESC
T ss_pred CeEEEEECCCcEEEEEEEEEcccCCeEeceE
Confidence 4699999999999999999999999876554
No 381
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=32.77 E-value=22 Score=27.87 Aligned_cols=20 Identities=25% Similarity=0.353 Sum_probs=16.4
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (136)
T 3lfr_A 99 HNHMAIVIDEYGGVAGLVTI 118 (136)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 34467899999999999985
No 382
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=32.63 E-value=23 Score=27.27 Aligned_cols=20 Identities=30% Similarity=0.345 Sum_probs=16.1
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+...-|++|.+|+++|+++.
T Consensus 98 ~~~~lpVvd~~g~~~Giit~ 117 (128)
T 3gby_A 98 KCSVVPLADEDGRYEGVVSR 117 (128)
T ss_dssp SSSEEEEECTTCBEEEEEEH
T ss_pred CCcEEEEECCCCCEEEEEEH
Confidence 33457899999999999875
No 383
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=32.01 E-value=24 Score=27.53 Aligned_cols=20 Identities=25% Similarity=0.421 Sum_probs=16.2
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..-.|++|.+|+++||++.
T Consensus 99 ~~~~~~Vvd~~g~lvGiit~ 118 (130)
T 3hf7_A 99 KKKVGLVVDEYGDIQGLVTV 118 (130)
T ss_dssp CCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEeeH
Confidence 34457889999999999975
No 384
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=31.78 E-value=24 Score=27.34 Aligned_cols=20 Identities=20% Similarity=0.298 Sum_probs=16.3
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++||++.
T Consensus 101 ~~~~~~Vvd~~g~~vGivt~ 120 (130)
T 3i8n_A 101 RLQLALVVDEYGTVLGLVTL 120 (130)
T ss_dssp TCCEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCCEEEEEEH
Confidence 44567889999999999974
No 385
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=31.21 E-value=24 Score=27.38 Aligned_cols=20 Identities=25% Similarity=0.375 Sum_probs=15.4
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++||++.
T Consensus 98 ~~~~~pVvd~~g~~~Giit~ 117 (129)
T 3jtf_A 98 RNHLAIVIDEHGGISGLVTM 117 (129)
T ss_dssp SCCEEEEECC-CCEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44567889999999999975
No 386
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=29.95 E-value=66 Score=23.02 Aligned_cols=20 Identities=15% Similarity=0.491 Sum_probs=16.9
Q ss_pred EEEEEEEECCEEEEEEEEee
Q 016647 360 EVIVEVLRGDQKEKIPVKLE 379 (385)
Q Consensus 360 ~v~l~v~R~g~~~~~~v~~~ 379 (385)
.+++++.|||++.++.+.+.
T Consensus 7 ditikiqrdgqeieidirvs 26 (96)
T 2jvf_A 7 DITIKIQRDGQEIEIDIRVS 26 (96)
T ss_dssp EEEEEEEETTEEEEEEEECC
T ss_pred EEEEEEeeCCeEEEEEEEEc
Confidence 47899999999998888754
No 387
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=29.47 E-value=29 Score=26.25 Aligned_cols=20 Identities=35% Similarity=0.556 Sum_probs=16.5
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+.+--|++|.+|+++|+++.
T Consensus 92 ~~~~l~Vvd~~g~~~Givt~ 111 (122)
T 3kpb_A 92 NISGVPVVDDYRRVVGIVTS 111 (122)
T ss_dssp TCSEEEEECTTCBEEEEEEH
T ss_pred CCCeEEEECCCCCEEEEEeH
Confidence 44567899988999999875
No 388
>1m5q_A SMAP3, small nuclear ribonucleoprotein homolog, SM-like P; OB-like fold, B-sheet toroid, 14-MER, cadmium-binding site, translation; 2.00A {Pyrobaculum aerophilum} SCOP: b.38.1.1
Probab=29.04 E-value=84 Score=25.27 Aligned_cols=55 Identities=7% Similarity=0.205 Sum_probs=39.1
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNP 236 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p 236 (385)
..+.|.+.+|+.+.+++.++|...++.|=.+.... .-.++ .-+-.|+.|..+.-|
T Consensus 11 k~V~V~Lk~G~~~~G~L~~~D~~MNlvL~d~~E~~----~~~lg--~v~IRG~nI~~I~~~ 65 (130)
T 1m5q_A 11 REVQVVLSNGEVYKGVLHAVDNQLNIVLANASNKA----GEKFN--RVFIMYRYIVHIDST 65 (130)
T ss_dssp SEEEEEETTSCEEEEEEEEECTTCCEEEEEEECTT----CCEEE--EEEECGGGEEEEEEC
T ss_pred CeEEEEECCCcEEEEEEEEEcccceeEEeeEEEEc----CCEec--eEEEeCCeEEEEEcC
Confidence 46899999999999999999999999888776532 11222 113346666666654
No 389
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=28.54 E-value=29 Score=27.52 Aligned_cols=20 Identities=20% Similarity=0.157 Sum_probs=16.3
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++||++.
T Consensus 117 ~~~~l~Vvd~~g~~~Giit~ 136 (148)
T 3lv9_A 117 KLQLAIVVDEYGGTSGVVTI 136 (148)
T ss_dssp TCSEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEEeCCCCEEEEEEH
Confidence 44467899999999999974
No 390
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=28.48 E-value=27 Score=27.95 Aligned_cols=20 Identities=25% Similarity=0.220 Sum_probs=16.5
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++||++.
T Consensus 115 ~~~~lpVvd~~g~~vGivt~ 134 (153)
T 3oco_A 115 RVPMAIVIDEYGGTSGIITD 134 (153)
T ss_dssp TCSCEEEECTTSCEEEEECH
T ss_pred CCcEEEEEeCCCCEEEEeeH
Confidence 44567999999999999974
No 391
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=28.36 E-value=29 Score=27.99 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.2
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++||++.
T Consensus 132 ~~~~~~Vvd~~g~~~Givt~ 151 (156)
T 3oi8_A 132 RNHMAIVIDEYGGTSGLVTF 151 (156)
T ss_dssp TCCEEEEECTTSSEEEEEEH
T ss_pred CCeEEEEECCCCCEEEEEEH
Confidence 34457899999999999975
No 392
>2y9a_D Small nuclear ribonucleoprotein SM D3; splicing-RNA complex, PRE-mRNA splicing, spliceosome, snRNP biogenesis, SM site, SM fold, heteromeric heptameric ring; 3.60A {Homo sapiens} PDB: 2y9b_D 2y9c_D 2y9d_D 3pgw_Z* 3cw1_D
Probab=27.58 E-value=1.2e+02 Score=24.18 Aligned_cols=60 Identities=12% Similarity=0.128 Sum_probs=39.3
Q ss_pred CeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCCCCCCcceecCCCCCCCCCCEEEEEeCCC
Q 016647 176 SDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAPKDKLRPIPIGVSADLLVGQKVYAIGNPF 237 (385)
Q Consensus 176 ~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~~~~~~~l~l~~~~~~~~G~~V~~iG~p~ 237 (385)
..+.|.+.+|+.|.+++..+|...++.|-.+......-....++ .-+-.|..|..+--|.
T Consensus 16 k~V~VeLknG~~~~G~L~~~D~~MNi~L~dv~e~~~~g~~~~l~--~v~IRGnnI~~I~lpd 75 (126)
T 2y9a_D 16 HIVTCETNTGEVYRGKLIEAEDNMNCQMSNITVTYRDGRVAQLE--QVYIRGSKIRFLILPD 75 (126)
T ss_dssp CEEEEEESSCCEEEEEEEEECTTSCEEEEEEEEECTTSCCEEEE--EEEECGGGEEEEECCS
T ss_pred CEEEEEECCCcEEEEEEEEEcCceEEEEeeEEEEcCCCcEeecc--cEEEeCCEEEEEEccc
Confidence 46899999999999999999999999988775421011122232 1123455665555553
No 393
>1z8r_A Coxsackievirus B4 polyprotein; beta barrel coordinated zinc ION, hydrolase; NMR {Human coxsackievirus B4}
Probab=27.42 E-value=88 Score=26.18 Aligned_cols=31 Identities=29% Similarity=0.422 Sum_probs=24.2
Q ss_pred cEEEEccccCCCCCCceeeCCCccEEEEeecc
Q 016647 266 DVIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 266 ~~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
.++.-..+..||+=||.|.- +.-||||++++
T Consensus 113 ~vl~~~G~~epGDCGG~L~C-~HGviGivTaG 143 (166)
T 1z8r_A 113 HVLLATGFSEPGDAGGILRC-EHGVIGLVTMG 143 (166)
T ss_dssp SEEEEECSSSCCCCBSEEEC-SSSEEEEEEEE
T ss_pred cEEEEecCCCCCCCCceeee-CCCceEEEecC
Confidence 34445567889999999984 56699999986
No 394
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=27.20 E-value=32 Score=27.18 Aligned_cols=16 Identities=25% Similarity=0.198 Sum_probs=14.3
Q ss_pred ceeeCCCccEEEEeec
Q 016647 281 GPLLDSSGSLIGINTA 296 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~ 296 (385)
-|++|.+|+++||++.
T Consensus 119 l~Vvd~~g~~~Giit~ 134 (150)
T 3lqn_A 119 ICAVNEDGYFEGILTR 134 (150)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEECCCCcEEEEEEH
Confidence 7899999999999975
No 395
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=26.87 E-value=33 Score=26.65 Aligned_cols=20 Identities=25% Similarity=0.267 Sum_probs=16.3
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+...-|++|.+|+++||++.
T Consensus 113 ~~~~l~Vvd~~g~~~Giit~ 132 (144)
T 2nyc_A 113 RVHRFFVVDDVGRLVGVLTL 132 (144)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCCEEEEECCCCCEEEEEEH
Confidence 34567899989999999975
No 396
>2m0o_A PHD finger protein 1; tudor domain, H3K36ME3 binding, peptide binding protein; HET: M3L; NMR {Homo sapiens}
Probab=26.26 E-value=81 Score=22.90 Aligned_cols=35 Identities=17% Similarity=0.365 Sum_probs=29.2
Q ss_pred CCeEEEEecCCCeEeeEEEEECCCCCeEEEEEcCC
Q 016647 175 ASDIRVTFADQSAYDAKIVGFDQDKDVAVLRIDAP 209 (385)
Q Consensus 175 ~~~i~V~~~dg~~~~a~vv~~d~~~DlAlLkv~~~ 209 (385)
.+++.++-.||.-|.++++.++...+-++++++..
T Consensus 30 GeDVLarwsDGlfYLGTI~kV~~~~e~ClV~F~D~ 64 (79)
T 2m0o_A 30 GQDVLARWTDGLLYLGTIKKVDSAREVCLVQFEDD 64 (79)
T ss_dssp TCEEEBCCTTSCCCEEEEEEEETTTTEEEEEETTS
T ss_pred CCEEEEEecCCCEEeEEEEEeccCCCEEEEEEcCC
Confidence 34566677899999999999999999999999764
No 397
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=26.25 E-value=33 Score=29.48 Aligned_cols=21 Identities=33% Similarity=0.476 Sum_probs=17.2
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+..--|++|.+|+++||++.
T Consensus 145 ~~~~~lpVVD~~g~lvGiIT~ 165 (205)
T 3kxr_A 145 SREIELPVIDDAGELIGRVTL 165 (205)
T ss_dssp SSCSEEEEECTTSBEEEEEEH
T ss_pred cCCCEEEEEcCCCeEEEEEEH
Confidence 344568999999999999975
No 398
>2o8m_A Protease; NS3, NS4A, viral protein; 2.00A {Hepatitis c virus} PDB: 3lon_A* 2a4g_A* 2a4q_A* 2fm2_A* 2obo_A* 2obq_A 2a4r_A* 2oc1_A* 2oc7_A* 2oc8_A* 3eyd_A* 3kf2_A 3kn2_A* 3knx_A* 2oc0_A* 3lox_A* 2oin_A 1rtl_A* 1rgq_A* 2f9v_A* ...
Probab=26.18 E-value=29 Score=30.02 Aligned_cols=22 Identities=41% Similarity=0.741 Sum_probs=18.9
Q ss_pred CCCCCCceeeCCCccEEEEeec
Q 016647 275 NPGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 275 ~~G~SGGPlvn~~G~VVGI~s~ 296 (385)
..|.||+||+-+.|++|||-..
T Consensus 146 ykGssgaPllCe~gh~vGly~~ 167 (200)
T 2o8m_A 146 LKGSAGGPLLCPAGHAVGLFRA 167 (200)
T ss_dssp TTTCTTCEEECTTSCEEEEEEE
T ss_pred EeCCCCCceeccCCceeeEEEE
Confidence 4688999999999999997554
No 399
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=25.77 E-value=35 Score=26.23 Aligned_cols=20 Identities=30% Similarity=0.434 Sum_probs=16.2
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+...-|++|.+|+++|+++.
T Consensus 97 ~~~~l~Vvd~~g~~~Giit~ 116 (133)
T 2ef7_A 97 NIRHLPVVDDKGNLKGIISI 116 (133)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCCEEEEECCCCeEEEEEEH
Confidence 34457899989999999985
No 400
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=25.69 E-value=36 Score=26.69 Aligned_cols=21 Identities=38% Similarity=0.542 Sum_probs=17.0
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+..--|++|.+|+++||++.
T Consensus 114 ~~~~~l~Vvd~~g~~~Giit~ 134 (152)
T 4gqw_A 114 TKYRRLPVVDSDGKLVGIITR 134 (152)
T ss_dssp SSCCEEEEECTTSBEEEEEEH
T ss_pred CCCCEEEEECCCCcEEEEEEH
Confidence 345567899999999999985
No 401
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=25.39 E-value=36 Score=27.12 Aligned_cols=16 Identities=38% Similarity=0.571 Sum_probs=14.2
Q ss_pred ceeeCCCccEEEEeec
Q 016647 281 GPLLDSSGSLIGINTA 296 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~ 296 (385)
-|++|.+|+++||++.
T Consensus 118 lpVvd~~g~~~Giit~ 133 (156)
T 3ctu_A 118 LPVVDAEGIFQGIITR 133 (156)
T ss_dssp EEEECTTSBEEEEEET
T ss_pred EEEEcCCCeEEEEEEH
Confidence 7889989999999975
No 402
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=25.25 E-value=36 Score=26.80 Aligned_cols=18 Identities=39% Similarity=0.783 Sum_probs=14.7
Q ss_pred ceeeCCCccEEEEeeccc
Q 016647 281 GPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~~ 298 (385)
.|++|.+|++||+++.++
T Consensus 106 ~PV~~~~g~viGvv~vg~ 123 (131)
T 1p0z_A 106 SPIQDATGKVIGIVSVGY 123 (131)
T ss_dssp EEEECTTCCEEEEEEEEE
T ss_pred EeEECCCCCEEEEEEEEE
Confidence 488888899999987654
No 403
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=24.90 E-value=37 Score=26.52 Aligned_cols=20 Identities=15% Similarity=0.318 Sum_probs=16.2
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..--|++|.+|+++|+++.
T Consensus 100 ~~~~l~Vvd~~g~~~Giit~ 119 (141)
T 2rih_A 100 NIRHVVVVNKNGELVGVLSI 119 (141)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCeEEEEEcCCCcEEEEEEH
Confidence 34457899989999999985
No 404
>3s6n_E Small nuclear ribonucleoprotein E; SMN complex, SMN-gemin2 complex, U-rich snRNA, SM fold, SM C SNRNPS, snRNP biogenesis, PRE-mRNA splicing; 2.50A {Homo sapiens} PDB: 2y9b_E 2y9c_E 2y9d_E 3cw1_E 3pgw_E* 2y9a_E
Probab=24.75 E-value=96 Score=23.24 Aligned_cols=31 Identities=16% Similarity=0.300 Sum_probs=25.9
Q ss_pred EEEEe----cCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 178 IRVTF----ADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 178 i~V~~----~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
+.|.+ .+|+++.+++.++|...++.|=....
T Consensus 29 v~V~l~~~~~~gr~~~G~L~gfD~~mNlvL~d~~E 63 (92)
T 3s6n_E 29 SRIQVWLYEQVNMRIEGCIIGFDEYMNLVLDDAEE 63 (92)
T ss_dssp CEEEEEESSSCSSEEEEEEEEECTTCCEEEEEEEE
T ss_pred EEEEEEEEecCCEEEEEEEEEEcCcCcEEEeeeEE
Confidence 45555 89999999999999999998877654
No 405
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=24.52 E-value=38 Score=23.75 Aligned_cols=20 Identities=10% Similarity=0.348 Sum_probs=15.0
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+-++-|++| +|+++||.+.
T Consensus 21 ~~i~~~~V~d-~~~lvGIvT~ 40 (70)
T 3ghd_A 21 NKAGSAVVME-GDEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEE-TTEEEEEEEH
T ss_pred cCCCEEEEEE-CCEEEEEEEH
Confidence 4555667775 7899999984
No 406
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=24.41 E-value=41 Score=26.75 Aligned_cols=20 Identities=25% Similarity=0.441 Sum_probs=17.4
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+.+.-|++|.+|+++|+++.
T Consensus 51 ~~~~~pVvd~~~~~vGivt~ 70 (152)
T 2uv4_A 51 RVSALPVVDEKGRVVDIYSK 70 (152)
T ss_dssp CCSEEEEECTTSBEEEEEEH
T ss_pred CCceEeEECCCCcEEEEEeH
Confidence 56788999999999999985
No 407
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=24.37 E-value=37 Score=27.84 Aligned_cols=14 Identities=36% Similarity=0.513 Sum_probs=0.0
Q ss_pred eeeCCCccEEEEee
Q 016647 282 PLLDSSGSLIGINT 295 (385)
Q Consensus 282 Plvn~~G~VVGI~s 295 (385)
|++|.+|+++||++
T Consensus 141 pVvd~~g~lvGiit 154 (172)
T 3lhh_A 141 FVVDEYGDLKGLVT 154 (172)
T ss_dssp EEECTTSCEEEEEE
T ss_pred EEEeCCCCEEEEee
No 408
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=24.35 E-value=39 Score=26.88 Aligned_cols=20 Identities=15% Similarity=0.111 Sum_probs=16.1
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+...-|++|.+|+++||++.
T Consensus 123 ~~~~lpVvd~~g~~vGiit~ 142 (152)
T 2uv4_A 123 EVHRLVVVDENDVVKGIVSL 142 (152)
T ss_dssp TCSEEEEECTTSBEEEEEEH
T ss_pred CCeEEEEECCCCeEEEEEEH
Confidence 34457899989999999975
No 409
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=24.28 E-value=41 Score=26.52 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=18.0
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|.+|+++|+++.
T Consensus 46 ~~~~~~pVvd~~~~~~Givt~ 66 (150)
T 3lqn_A 46 SGYSAIPVLDPMYKLHGLIST 66 (150)
T ss_dssp HTCSEEEEECTTCBEEEEEEH
T ss_pred cCCcEEEEECCCCCEEEEEEH
Confidence 456788999999999999985
No 410
>2hrv_A 2A cysteine proteinase; hydrolase (cysteine proteinase); 1.95A {Human rhinovirus 2} SCOP: b.47.1.4
Probab=24.21 E-value=93 Score=25.42 Aligned_cols=30 Identities=37% Similarity=0.584 Sum_probs=23.6
Q ss_pred EEEEccccCCCCCCceeeCCCccEEEEeecc
Q 016647 267 VIQTDAAINPGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 267 ~i~~d~~i~~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
++.-..+..||+=||.|.- +.-||||++++
T Consensus 94 ~l~g~G~~epGDCGG~L~C-~HGviGivTaG 123 (142)
T 2hrv_A 94 LLIGEGPCEPGDCGGKLLC-KHGVIGIVTAG 123 (142)
T ss_dssp EEEEECCCCTTCTTCEEEE-TTEEEEEEEEE
T ss_pred EEEEEcCCCCCCCCceeee-CCCceEEEecC
Confidence 3444567789999999984 56799999986
No 411
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=24.20 E-value=39 Score=27.50 Aligned_cols=14 Identities=57% Similarity=1.006 Sum_probs=0.0
Q ss_pred eeeCCCccEEEEee
Q 016647 282 PLLDSSGSLIGINT 295 (385)
Q Consensus 282 Plvn~~G~VVGI~s 295 (385)
|++|.+|+++||++
T Consensus 133 pVvd~~g~~vGiit 146 (180)
T 3sl7_A 133 PVVDADGKLIGILT 146 (180)
T ss_dssp EEECTTCBEEEEEE
T ss_pred EEECCCCeEEEEEE
No 412
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=23.47 E-value=44 Score=26.57 Aligned_cols=21 Identities=10% Similarity=0.150 Sum_probs=17.3
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|.+|+++|+++.
T Consensus 46 ~~~~~~~Vvd~~~~~~Giit~ 66 (156)
T 3ctu_A 46 MTYTRVPVVTDEKQFVGTIGL 66 (156)
T ss_dssp CSSSEEEEECC-CBEEEEEEH
T ss_pred CCCceEeEECCCCEEEEEEcH
Confidence 567789999999999999984
No 413
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=23.40 E-value=47 Score=24.92 Aligned_cols=21 Identities=33% Similarity=0.536 Sum_probs=17.8
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|.+|+++|+++.
T Consensus 30 ~~~~~~~Vvd~~~~~~G~vt~ 50 (122)
T 3kpb_A 30 HNINHLPIVDEHGKLVGIITS 50 (122)
T ss_dssp HTCSCEEEECTTSBEEEEECH
T ss_pred cCCCeEEEECCCCCEEEEEEH
Confidence 356788999999999999974
No 414
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=23.17 E-value=38 Score=28.06 Aligned_cols=20 Identities=20% Similarity=0.170 Sum_probs=16.3
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+..-.|++|.+|+++||++.
T Consensus 129 ~~~~~~Vvde~g~lvGiIT~ 148 (173)
T 3ocm_A 129 RGQLVLVADEFGAIEGLVTP 148 (173)
T ss_dssp TTCCEEEECTTCCEEEEECH
T ss_pred CCeEEEEEeCCCCEEEEEeH
Confidence 44467889999999999974
No 415
>4a4f_A SurviVal of motor neuron-related-splicing factor; RNA binding protein; HET: 2MR; NMR {Homo sapiens} PDB: 4a4h_A*
Probab=23.01 E-value=1.9e+02 Score=19.79 Aligned_cols=34 Identities=18% Similarity=0.389 Sum_probs=25.7
Q ss_pred CCeEEEEe-cCCCeEeeEEEEECCCCCeEEEEEcC
Q 016647 175 ASDIRVTF-ADQSAYDAKIVGFDQDKDVAVLRIDA 208 (385)
Q Consensus 175 ~~~i~V~~-~dg~~~~a~vv~~d~~~DlAlLkv~~ 208 (385)
.+.+...+ .||+.|+|++..++...+.+.+.+..
T Consensus 12 Gd~c~A~~s~Dg~wYrA~I~~v~~~~~~~~V~fvd 46 (64)
T 4a4f_A 12 GDKCMAVWSEDGQCYEAEIEEIDEENGTAAITFAG 46 (64)
T ss_dssp TCEEEEECTTTSSEEEEEEEEEETTTTEEEEEETT
T ss_pred CCEEEEEECCCCCEEEEEEEEEcCCCCEEEEEEEe
Confidence 34566676 58999999999999776777777653
No 416
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=22.79 E-value=43 Score=22.53 Aligned_cols=20 Identities=10% Similarity=0.348 Sum_probs=16.2
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|. |+++||++.
T Consensus 21 ~~~~~~pV~d~-~~l~Givt~ 40 (70)
T 3fio_A 21 NKAGSAVVMEG-DEILGVVTE 40 (70)
T ss_dssp TTCSEEEEEET-TEEEEEEEH
T ss_pred cCCCEEEEEEC-CEEEEEEEH
Confidence 45667888986 999999984
No 417
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=22.69 E-value=45 Score=26.83 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=17.7
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.++-|++|.+|+++|+++.
T Consensus 34 ~~~~~~pVvd~~~~lvGivt~ 54 (160)
T 2o16_A 34 LDIRHVPIVDANKKLLGIVSQ 54 (160)
T ss_dssp HTCSEEEEECTTCBEEEEEEH
T ss_pred cCCCEEEEEcCCCcEEEEEeH
Confidence 356788999989999999984
No 418
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=22.52 E-value=46 Score=26.59 Aligned_cols=21 Identities=33% Similarity=0.433 Sum_probs=17.9
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|.+|+++|+++.
T Consensus 45 ~~~~~~pVvd~~~~lvGivt~ 65 (159)
T 1yav_A 45 TGYTAIPVLDPSYRLHGLIGT 65 (159)
T ss_dssp HCCSEEEEECTTCBEEEEEEH
T ss_pred CCCcEEEEECCCCCEEEEeEH
Confidence 456789999999999999974
No 419
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=22.43 E-value=44 Score=26.51 Aligned_cols=16 Identities=25% Similarity=0.233 Sum_probs=14.2
Q ss_pred ceeeCCCccEEEEeec
Q 016647 281 GPLLDSSGSLIGINTA 296 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~ 296 (385)
-|++|.+|+++|+++.
T Consensus 115 l~Vvd~~g~~~Giit~ 130 (157)
T 2emq_A 115 VCVENDDGYFAGIFTR 130 (157)
T ss_dssp EEEECSSSSEEEEEEH
T ss_pred EEEEcCCCeEEEEEEH
Confidence 7889989999999985
No 420
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=22.00 E-value=45 Score=26.66 Aligned_cols=20 Identities=20% Similarity=0.398 Sum_probs=16.2
Q ss_pred CCCCceeeCCCccEEEEeec
Q 016647 277 GNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 277 G~SGGPlvn~~G~VVGI~s~ 296 (385)
+...-|++|.+|+++|+++.
T Consensus 125 ~~~~lpVvd~~g~~vGiit~ 144 (157)
T 1o50_A 125 NIQEMPVVDEKGEIVGDLNS 144 (157)
T ss_dssp TCSEEEEECTTSCEEEEEEH
T ss_pred CCcEEEEEcCCCEEEEEEEH
Confidence 34457899989999999985
No 421
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=21.72 E-value=57 Score=25.03 Aligned_cols=21 Identities=14% Similarity=0.124 Sum_probs=18.0
Q ss_pred CCCCCceeeCCC-ccEEEEeec
Q 016647 276 PGNSGGPLLDSS-GSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~-G~VVGI~s~ 296 (385)
.+.+.-|++|.+ |+++|+++.
T Consensus 37 ~~~~~~pVvd~~~~~~~Givt~ 58 (130)
T 3i8n_A 37 TPFSRPLVYSEQKDNIIGFVHR 58 (130)
T ss_dssp CSCSCCEEESSSTTCEEEECCH
T ss_pred CCCCEEEEEeCCCCcEEEEEEH
Confidence 577889999987 999999874
No 422
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=21.71 E-value=49 Score=25.55 Aligned_cols=21 Identities=14% Similarity=0.248 Sum_probs=17.6
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|.+|+++|+++.
T Consensus 36 ~~~~~~~Vvd~~~~~~Givt~ 56 (138)
T 2yzi_A 36 FDVGSLVVINDDGNVVGFFTK 56 (138)
T ss_dssp HTCSEEEEECTTSCEEEEEEH
T ss_pred cCCCEEEEEcCCCcEEEEEeH
Confidence 356788999989999999984
No 423
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=21.55 E-value=47 Score=26.53 Aligned_cols=16 Identities=19% Similarity=0.048 Sum_probs=14.2
Q ss_pred ceeeCCCccEEEEeec
Q 016647 281 GPLLDSSGSLIGINTA 296 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~ 296 (385)
-|++|.+|+++|+++.
T Consensus 118 lpVvd~~g~~vGiit~ 133 (159)
T 1yav_A 118 VCVENDEQVFEGIFTR 133 (159)
T ss_dssp EEEECTTCBEEEEEEH
T ss_pred EEEEeCCCeEEEEEEH
Confidence 7889989999999985
No 424
>3by8_A Sensor protein DCUS; histidine kinase sensor domain, inner membrane, membrane, phosphoprotein, transferase, transmembrane; 1.45A {Escherichia coli} SCOP: d.110.6.1 PDB: 1ojg_A
Probab=21.00 E-value=48 Score=26.49 Aligned_cols=18 Identities=22% Similarity=0.353 Sum_probs=14.3
Q ss_pred ceeeCCCccEEEEeeccc
Q 016647 281 GPLLDSSGSLIGINTAIY 298 (385)
Q Consensus 281 GPlvn~~G~VVGI~s~~~ 298 (385)
.|+.|.+|++||+++.+.
T Consensus 111 ~PV~~~~g~viGvv~vg~ 128 (142)
T 3by8_A 111 TPIYDENHKQIGVVAIGL 128 (142)
T ss_dssp EEEECTTSCEEEEEEEEE
T ss_pred EeEEcCCCCEEEEEEEeE
Confidence 478877899999987543
No 425
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=20.82 E-value=54 Score=25.04 Aligned_cols=22 Identities=23% Similarity=0.286 Sum_probs=18.0
Q ss_pred CCCCCceeeCCC-ccEEEEeecc
Q 016647 276 PGNSGGPLLDSS-GSLIGINTAI 297 (385)
Q Consensus 276 ~G~SGGPlvn~~-G~VVGI~s~~ 297 (385)
.+.+.-|++|.+ |+++|+++..
T Consensus 34 ~~~~~~pVvd~~~~~~vGivt~~ 56 (127)
T 3nqr_A 34 SAHSRFPVISEDKDHIEGILMAK 56 (127)
T ss_dssp HCCSEEEEESSSTTCEEEEEEGG
T ss_pred CCCCEEEEEcCCCCcEEEEEEHH
Confidence 456788999987 8999999853
No 426
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=20.69 E-value=56 Score=25.48 Aligned_cols=21 Identities=24% Similarity=0.436 Sum_probs=18.0
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|.+|+++|+++.
T Consensus 36 ~~~~~~~Vvd~~~~~~G~vt~ 56 (152)
T 4gqw_A 36 NRITGFPVIDEDWKLVGLVSD 56 (152)
T ss_dssp TTCSEEEEECTTCBEEEEEEH
T ss_pred cCCceEEEEeCCCeEEEEEEH
Confidence 466788999999999999984
No 427
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=20.69 E-value=52 Score=26.06 Aligned_cols=21 Identities=38% Similarity=0.487 Sum_probs=17.7
Q ss_pred CCCCCceeeCCCccEEEEeec
Q 016647 276 PGNSGGPLLDSSGSLIGINTA 296 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~ 296 (385)
.+.+.-|++|.+|+++|+++.
T Consensus 42 ~~~~~~pVvd~~~~~~Givt~ 62 (157)
T 2emq_A 42 TGYSAIPVLDTSYKLHGLISM 62 (157)
T ss_dssp SSSSEEEEECTTCCEEEEEEH
T ss_pred CCceEEEEEcCCCCEEEEeeH
Confidence 456788999989999999984
No 428
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=20.43 E-value=49 Score=28.82 Aligned_cols=22 Identities=18% Similarity=0.345 Sum_probs=18.7
Q ss_pred CCCCCceeeCCCccEEEEeecc
Q 016647 276 PGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
.+.+.-|++|.+|+++||++..
T Consensus 215 ~~~~~~pVvd~~~~~~Giit~~ 236 (245)
T 3l2b_A 215 TRYSNYPVIDENNKVVGSIARF 236 (245)
T ss_dssp HCCSEEEEECTTCBEEEEEECC
T ss_pred cCCceEEEEcCCCeEEEEEEHH
Confidence 4677889999999999999853
No 429
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=20.10 E-value=56 Score=25.12 Aligned_cols=22 Identities=32% Similarity=0.395 Sum_probs=18.1
Q ss_pred CCCCCceeeCCCccEEEEeecc
Q 016647 276 PGNSGGPLLDSSGSLIGINTAI 297 (385)
Q Consensus 276 ~G~SGGPlvn~~G~VVGI~s~~ 297 (385)
.+.+.-|++|.+|+++|+++..
T Consensus 37 ~~~~~~~Vvd~~~~~~Givt~~ 58 (138)
T 2p9m_A 37 YKISSLPVIDDENKVIGIVTTT 58 (138)
T ss_dssp HTCCEEEEECTTCBEEEEEEHH
T ss_pred CCCcEEEEECCCCeEEEEEEHH
Confidence 3567889999899999999853
Done!