Query 016649
Match_columns 385
No_of_seqs 276 out of 1376
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 08:45:23 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/016649.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/016649hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02580 trehalose-phosphatase 100.0 1.2E-85 2.6E-90 647.7 38.1 382 1-383 1-383 (384)
2 PLN03017 trehalose-phosphatase 100.0 1.3E-65 2.8E-70 501.5 35.4 343 24-383 16-365 (366)
3 PLN02151 trehalose-phosphatase 100.0 7.9E-62 1.7E-66 473.6 32.3 315 45-384 33-352 (354)
4 PLN02205 alpha,alpha-trehalose 100.0 7.9E-45 1.7E-49 391.8 24.4 294 55-380 495-848 (854)
5 PLN03064 alpha,alpha-trehalose 100.0 7.2E-43 1.6E-47 375.5 29.1 299 55-381 505-931 (934)
6 PLN03063 alpha,alpha-trehalose 100.0 3.4E-42 7.4E-47 370.9 29.0 298 55-380 421-787 (797)
7 PRK14501 putative bifunctional 100.0 2.1E-40 4.6E-45 356.1 26.0 287 55-378 406-725 (726)
8 PF02358 Trehalose_PPase: Treh 100.0 1.6E-40 3.4E-45 311.5 15.4 225 122-367 1-235 (235)
9 PRK10187 trehalose-6-phosphate 100.0 1.6E-38 3.4E-43 303.3 28.4 232 118-381 14-248 (266)
10 COG1877 OtsB Trehalose-6-phosp 100.0 7.5E-39 1.6E-43 301.9 24.8 244 110-380 10-255 (266)
11 TIGR00685 T6PP trehalose-phosp 100.0 1.2E-37 2.7E-42 293.6 27.9 236 116-377 1-243 (244)
12 KOG1050 Trehalose-6-phosphate 100.0 3E-33 6.6E-38 294.6 23.4 277 56-374 419-731 (732)
13 COG0561 Cof Predicted hydrolas 100.0 7.2E-29 1.6E-33 235.9 20.2 225 117-378 2-262 (264)
14 PRK10976 putative hydrolase; P 100.0 1.1E-28 2.3E-33 234.9 20.7 241 118-377 2-264 (266)
15 PRK10513 sugar phosphate phosp 100.0 2.6E-28 5.6E-33 232.6 21.8 239 118-377 3-268 (270)
16 PRK15126 thiamin pyrimidine py 100.0 1.5E-28 3.2E-33 234.9 19.1 241 118-378 2-263 (272)
17 PRK03669 mannosyl-3-phosphogly 100.0 6.8E-28 1.5E-32 230.5 22.8 224 117-379 6-270 (271)
18 PRK01158 phosphoglycolate phos 100.0 3.1E-28 6.6E-33 226.5 19.2 217 118-377 3-229 (230)
19 TIGR01484 HAD-SF-IIB HAD-super 100.0 4.6E-28 1E-32 221.5 13.4 200 120-350 1-204 (204)
20 PLN02887 hydrolase family prot 100.0 3.4E-27 7.4E-32 245.3 19.1 248 112-377 302-579 (580)
21 TIGR01485 SPP_plant-cyano sucr 99.9 1E-26 2.3E-31 219.6 20.5 229 118-376 1-246 (249)
22 PF08282 Hydrolase_3: haloacid 99.9 3.2E-26 6.9E-31 213.0 20.6 229 121-373 1-254 (254)
23 PRK10530 pyridoxal phosphate ( 99.9 6.8E-26 1.5E-30 215.7 20.1 240 118-377 3-271 (272)
24 TIGR01482 SPP-subfamily Sucros 99.9 3.3E-26 7.1E-31 212.0 17.2 213 121-376 1-224 (225)
25 TIGR02471 sucr_syn_bact_C sucr 99.9 7.4E-26 1.6E-30 212.0 17.9 218 120-376 1-234 (236)
26 TIGR01487 SPP-like sucrose-pho 99.9 7.7E-26 1.7E-30 208.8 17.2 207 119-373 2-215 (215)
27 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 6.5E-25 1.4E-29 208.1 21.2 219 120-377 1-256 (256)
28 TIGR00099 Cof-subfamily Cof su 99.9 4.2E-25 9.1E-30 209.1 18.6 235 120-373 1-256 (256)
29 PLN02382 probable sucrose-phos 99.9 6.2E-24 1.4E-28 214.3 20.9 233 113-377 4-260 (413)
30 PRK00192 mannosyl-3-phosphogly 99.9 2.9E-23 6.2E-28 198.8 21.5 232 118-378 4-271 (273)
31 TIGR02463 MPGP_rel mannosyl-3- 99.9 1E-22 2.2E-27 188.6 20.9 195 120-350 1-220 (221)
32 PTZ00174 phosphomannomutase; P 99.9 1.2E-22 2.5E-27 192.0 17.8 203 116-354 3-234 (247)
33 PF05116 S6PP: Sucrose-6F-phos 99.9 5.5E-23 1.2E-27 194.2 10.8 225 117-375 1-244 (247)
34 PLN02423 phosphomannomutase 99.9 5.2E-21 1.1E-25 180.6 22.0 211 115-377 4-244 (245)
35 PRK14502 bifunctional mannosyl 99.9 3.3E-20 7.1E-25 193.2 24.3 234 115-377 413-690 (694)
36 PRK12702 mannosyl-3-phosphogly 99.8 5.5E-20 1.2E-24 174.8 19.2 207 118-352 1-253 (302)
37 TIGR02461 osmo_MPG_phos mannos 99.8 2E-20 4.3E-25 174.4 13.7 203 120-351 1-225 (225)
38 KOG1050 Trehalose-6-phosphate 99.8 5.9E-23 1.3E-27 216.9 -22.0 377 2-381 69-466 (732)
39 COG3769 Predicted hydrolase (H 99.6 8.4E-14 1.8E-18 125.7 16.4 204 117-353 6-237 (274)
40 KOG3189 Phosphomannomutase [Li 99.4 8.8E-12 1.9E-16 111.0 14.7 198 112-338 5-228 (252)
41 TIGR02468 sucrsPsyn_pln sucros 99.3 6.3E-11 1.4E-15 129.7 14.4 196 117-339 769-994 (1050)
42 PF03332 PMM: Eukaryotic phosp 99.2 1.2E-10 2.5E-15 106.5 11.4 195 145-377 1-219 (220)
43 TIGR01670 YrbI-phosphatas 3-de 99.1 4.4E-10 9.4E-15 98.7 9.8 72 301-380 76-152 (154)
44 PRK09484 3-deoxy-D-manno-octul 99.0 1.3E-09 2.9E-14 98.4 7.2 56 301-364 96-153 (183)
45 PRK11133 serB phosphoserine ph 98.9 5.8E-10 1.3E-14 109.3 4.6 67 299-374 246-316 (322)
46 cd01427 HAD_like Haloacid deha 98.8 2.1E-08 4.5E-13 83.5 7.5 55 120-174 1-59 (139)
47 smart00775 LNS2 LNS2 domain. T 98.6 6.7E-08 1.5E-12 85.2 6.6 73 120-192 1-91 (157)
48 TIGR02726 phenyl_P_delta pheny 98.2 9.6E-07 2.1E-11 78.8 4.2 70 301-378 82-156 (169)
49 TIGR01689 EcbF-BcbF capsule bi 98.2 2.2E-06 4.8E-11 72.7 5.6 52 119-170 2-55 (126)
50 TIGR01684 viral_ppase viral ph 98.2 3.3E-06 7.1E-11 81.0 7.1 73 115-190 123-201 (301)
51 COG1778 Low specificity phosph 98.1 1.7E-06 3.8E-11 74.9 2.2 70 300-377 82-156 (170)
52 PHA03398 viral phosphatase sup 97.9 2.2E-05 4.8E-10 75.4 6.6 72 115-191 125-204 (303)
53 TIGR01457 HAD-SF-IIA-hyp2 HAD- 97.5 8.9E-05 1.9E-09 70.2 4.2 65 119-189 2-75 (249)
54 TIGR01681 HAD-SF-IIIC HAD-supe 97.5 0.0002 4.4E-09 60.8 5.6 56 119-174 1-65 (128)
55 TIGR01662 HAD-SF-IIIA HAD-supe 97.4 0.0002 4.3E-09 60.6 4.0 56 119-174 1-68 (132)
56 TIGR01664 DNA-3'-Pase DNA 3'-p 97.3 0.00056 1.2E-08 60.8 6.3 50 117-166 12-69 (166)
57 TIGR01458 HAD-SF-IIA-hyp3 HAD- 97.2 0.00029 6.4E-09 67.0 4.1 65 302-373 181-254 (257)
58 TIGR01672 AphA HAD superfamily 97.2 0.0015 3.2E-08 61.5 8.1 59 106-164 50-139 (237)
59 COG0560 SerB Phosphoserine pho 97.1 0.00036 7.8E-09 64.6 3.4 45 299-351 142-186 (212)
60 PRK10444 UMP phosphatase; Prov 97.1 0.00048 1E-08 65.3 4.3 49 119-173 2-51 (248)
61 TIGR01525 ATPase-IB_hvy heavy 97.0 0.0031 6.8E-08 66.6 9.8 63 110-174 356-420 (556)
62 TIGR01452 PGP_euk phosphoglyco 96.9 0.001 2.2E-08 64.0 4.3 43 119-167 3-46 (279)
63 PLN02645 phosphoglycolate phos 96.9 0.00096 2.1E-08 65.3 3.9 48 118-171 28-76 (311)
64 TIGR00213 GmhB_yaeD D,D-heptos 96.8 0.00097 2.1E-08 59.6 3.2 48 119-166 2-53 (176)
65 TIGR01522 ATPase-IIA2_Ca golgi 96.7 0.014 3.1E-07 65.0 11.8 166 110-374 495-671 (884)
66 TIGR00338 serB phosphoserine p 96.5 0.0018 3.9E-08 59.4 2.8 63 301-371 152-217 (219)
67 PRK11009 aphA acid phosphatase 96.5 0.0066 1.4E-07 57.1 6.5 61 105-165 49-140 (237)
68 COG2179 Predicted hydrolase of 96.4 0.012 2.6E-07 51.9 7.5 62 113-178 23-85 (175)
69 PRK10117 trehalose-6-phosphate 96.4 0.00029 6.3E-09 72.4 -3.2 49 55-107 397-454 (474)
70 TIGR01491 HAD-SF-IB-PSPlk HAD- 96.3 0.0042 9.1E-08 55.9 4.3 45 300-352 146-190 (201)
71 PF08645 PNK3P: Polynucleotide 96.3 0.0026 5.6E-08 56.2 2.6 44 119-162 1-52 (159)
72 TIGR01668 YqeG_hyp_ppase HAD s 96.3 0.013 2.9E-07 52.1 7.1 55 115-173 22-78 (170)
73 PRK10671 copA copper exporting 96.3 0.0045 9.8E-08 68.5 4.8 68 292-374 694-765 (834)
74 COG0380 OtsA Trehalose-6-phosp 96.2 0.00049 1.1E-08 70.6 -2.6 46 56-105 424-478 (486)
75 TIGR01647 ATPase-IIIA_H plasma 96.2 0.05 1.1E-06 59.7 12.7 68 291-373 515-586 (755)
76 PHA02530 pseT polynucleotide k 96.2 0.012 2.5E-07 56.9 7.0 58 117-174 157-222 (300)
77 TIGR01106 ATPase-IIC_X-K sodiu 96.2 0.052 1.1E-06 61.4 12.9 59 292-365 665-726 (997)
78 PRK13222 phosphoglycolate phos 96.2 0.011 2.3E-07 54.3 6.3 67 301-375 150-223 (226)
79 TIGR01488 HAD-SF-IB Haloacid D 96.2 0.003 6.5E-08 55.7 2.4 41 295-339 137-177 (177)
80 PRK10517 magnesium-transportin 96.1 0.063 1.4E-06 60.0 12.8 68 291-373 618-689 (902)
81 TIGR01517 ATPase-IIB_Ca plasma 96.1 0.044 9.6E-07 61.6 11.5 67 292-373 650-721 (941)
82 COG1778 Low specificity phosph 96.1 0.0076 1.7E-07 52.6 4.1 59 116-174 6-70 (170)
83 TIGR01656 Histidinol-ppas hist 96.0 0.008 1.7E-07 52.0 4.3 47 120-166 2-54 (147)
84 TIGR01511 ATPase-IB1_Cu copper 96.0 0.021 4.6E-07 60.4 8.1 67 293-374 449-519 (562)
85 TIGR02398 gluc_glyc_Psyn gluco 95.9 0.00079 1.7E-08 69.7 -2.9 48 55-106 426-482 (487)
86 TIGR01663 PNK-3'Pase polynucle 95.9 0.013 2.9E-07 61.2 6.2 52 115-166 165-224 (526)
87 PF13344 Hydrolase_6: Haloacid 95.9 0.0069 1.5E-07 49.3 3.2 42 121-168 1-43 (101)
88 TIGR01512 ATPase-IB2_Cd heavy 95.9 0.011 2.4E-07 62.3 5.3 62 301-374 413-479 (536)
89 smart00577 CPDc catalytic doma 95.9 0.015 3.2E-07 50.5 5.3 58 117-174 1-79 (148)
90 PRK15122 magnesium-transportin 95.9 0.093 2E-06 58.7 12.8 68 291-373 618-689 (903)
91 TIGR01533 lipo_e_P4 5'-nucleot 95.8 0.013 2.9E-07 56.0 5.3 66 105-170 62-149 (266)
92 TIGR01490 HAD-SF-IB-hyp1 HAD-s 95.8 0.01 2.2E-07 53.7 4.3 45 299-351 153-197 (202)
93 PRK06769 hypothetical protein; 95.8 0.0071 1.5E-07 53.9 3.2 49 117-165 3-54 (173)
94 PF09419 PGP_phosphatase: Mito 95.8 0.032 6.9E-07 49.7 7.2 49 113-165 36-87 (168)
95 TIGR01460 HAD-SF-IIA Haloacid 95.8 0.012 2.5E-07 55.3 4.6 47 121-173 1-51 (236)
96 TIGR01116 ATPase-IIA1_Ca sarco 95.8 0.015 3.3E-07 65.0 6.1 66 293-373 613-682 (917)
97 TIGR01497 kdpB K+-transporting 95.7 0.011 2.4E-07 63.6 4.6 67 292-373 490-560 (675)
98 TIGR01261 hisB_Nterm histidino 95.7 0.0085 1.9E-07 53.0 3.2 48 118-165 1-55 (161)
99 PF00982 Glyco_transf_20: Glyc 95.7 0.00073 1.6E-08 69.9 -4.3 48 53-104 414-472 (474)
100 PRK13582 thrH phosphoserine ph 95.6 0.012 2.6E-07 53.3 4.0 66 301-378 132-200 (205)
101 PF06437 ISN1: IMP-specific 5' 95.6 1.1 2.4E-05 44.7 17.5 60 109-171 137-198 (408)
102 PRK08942 D,D-heptose 1,7-bisph 95.6 0.011 2.3E-07 53.0 3.3 64 303-374 106-177 (181)
103 PLN02954 phosphoserine phospha 95.6 0.029 6.3E-07 51.6 6.3 67 299-373 153-223 (224)
104 TIGR02726 phenyl_P_delta pheny 95.5 0.017 3.8E-07 51.5 4.3 57 118-174 7-69 (169)
105 TIGR01652 ATPase-Plipid phosph 95.4 0.12 2.5E-06 58.9 11.7 60 292-365 749-811 (1057)
106 PRK05446 imidazole glycerol-ph 95.4 0.018 3.9E-07 57.4 4.4 48 117-164 1-55 (354)
107 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.4 0.023 5E-07 53.3 4.9 45 118-168 8-53 (242)
108 TIGR01657 P-ATPase-V P-type AT 95.3 0.13 2.9E-06 58.5 11.4 68 291-373 782-851 (1054)
109 COG4087 Soluble P-type ATPase 95.1 0.029 6.3E-07 47.6 4.1 50 322-376 95-149 (152)
110 COG2217 ZntA Cation transport 95.1 0.029 6.4E-07 60.7 5.3 69 291-374 580-652 (713)
111 PRK13223 phosphoglycolate phos 95.0 0.039 8.5E-07 52.8 5.3 68 299-374 156-230 (272)
112 PF08235 LNS2: LNS2 (Lipin/Ned 95.0 0.036 7.8E-07 48.8 4.6 52 120-171 1-59 (157)
113 PF06888 Put_Phosphatase: Puta 94.9 0.031 6.7E-07 52.5 4.1 78 295-376 145-233 (234)
114 PRK13582 thrH phosphoserine ph 94.8 0.041 8.8E-07 49.8 4.7 32 143-174 71-102 (205)
115 PRK11033 zntA zinc/cadmium/mer 94.7 0.034 7.4E-07 60.8 4.6 66 292-373 611-680 (741)
116 TIGR02137 HSK-PSP phosphoserin 94.7 0.034 7.4E-07 51.0 3.9 66 299-376 130-198 (203)
117 TIGR01675 plant-AP plant acid 94.7 0.076 1.6E-06 49.7 6.2 54 115-168 74-149 (229)
118 PF03031 NIF: NLI interacting 94.7 0.032 7E-07 48.6 3.6 56 119-174 1-70 (159)
119 COG4030 Uncharacterized protei 94.7 0.079 1.7E-06 49.1 6.1 47 299-350 189-235 (315)
120 TIGR01685 MDP-1 magnesium-depe 94.6 0.069 1.5E-06 47.9 5.6 57 118-174 2-81 (174)
121 PRK13225 phosphoglycolate phos 94.5 0.1 2.2E-06 50.1 7.0 70 301-377 196-271 (273)
122 PRK09552 mtnX 2-hydroxy-3-keto 94.5 0.05 1.1E-06 50.1 4.6 69 299-379 146-218 (219)
123 KOG0210 P-type ATPase [Inorgan 94.5 0.033 7.2E-07 58.9 3.6 62 301-372 768-831 (1051)
124 PLN03190 aminophospholipid tra 94.3 0.68 1.5E-05 53.3 14.0 66 293-377 853-922 (1178)
125 PRK13288 pyrophosphatase PpaX; 94.3 0.076 1.6E-06 48.5 5.4 67 301-375 139-212 (214)
126 TIGR01686 FkbH FkbH-like domai 94.3 0.092 2E-06 51.5 6.2 57 118-174 3-66 (320)
127 TIGR01454 AHBA_synth_RP 3-amin 94.2 0.1 2.2E-06 47.3 6.0 66 301-374 132-204 (205)
128 TIGR00338 serB phosphoserine p 94.2 0.081 1.8E-06 48.4 5.3 33 142-174 87-120 (219)
129 PLN02954 phosphoserine phospha 94.1 0.088 1.9E-06 48.3 5.4 33 142-174 86-119 (224)
130 TIGR01449 PGP_bact 2-phosphogl 94.1 0.087 1.9E-06 47.8 5.2 64 301-372 142-212 (213)
131 COG0546 Gph Predicted phosphat 94.0 0.11 2.4E-06 48.0 5.9 68 302-374 147-218 (220)
132 TIGR02245 HAD_IIID1 HAD-superf 93.9 0.11 2.3E-06 47.5 5.3 59 116-174 19-79 (195)
133 PRK01122 potassium-transportin 93.7 0.083 1.8E-06 57.1 4.9 68 291-373 488-559 (679)
134 PTZ00445 p36-lilke protein; Pr 93.6 0.12 2.7E-06 47.5 5.2 54 112-166 37-102 (219)
135 PRK13226 phosphoglycolate phos 93.6 0.16 3.4E-06 47.2 6.1 64 302-373 153-224 (229)
136 TIGR02250 FCP1_euk FCP1-like p 93.6 0.16 3.4E-06 44.7 5.7 60 115-174 3-92 (156)
137 TIGR01489 DKMTPPase-SF 2,3-dik 93.6 0.15 3.2E-06 45.1 5.7 37 296-339 145-181 (188)
138 TIGR01456 CECR5 HAD-superfamil 93.5 0.14 3.1E-06 50.2 5.9 46 120-171 2-55 (321)
139 PF13242 Hydrolase_like: HAD-h 93.4 0.24 5.2E-06 37.6 5.8 58 304-368 8-74 (75)
140 COG0560 SerB Phosphoserine pho 93.3 0.12 2.5E-06 47.9 4.5 36 139-174 76-112 (212)
141 TIGR02251 HIF-SF_euk Dullard-l 93.3 0.16 3.4E-06 44.8 5.2 57 118-174 1-76 (162)
142 TIGR01524 ATPase-IIIB_Mg magne 92.9 0.17 3.8E-06 56.3 6.1 68 291-373 583-654 (867)
143 PF03767 Acid_phosphat_B: HAD 92.9 0.027 5.9E-07 52.7 -0.2 56 116-171 70-147 (229)
144 PRK14010 potassium-transportin 92.9 0.11 2.3E-06 56.2 4.2 68 291-373 484-555 (673)
145 TIGR01680 Veg_Stor_Prot vegeta 92.9 0.18 3.9E-06 48.3 5.2 52 117-168 100-174 (275)
146 PRK09552 mtnX 2-hydroxy-3-keto 92.8 0.11 2.3E-06 47.9 3.7 15 118-132 3-17 (219)
147 PRK08238 hypothetical protein; 92.8 0.24 5.2E-06 51.5 6.5 47 141-187 73-122 (479)
148 TIGR01523 ATPase-IID_K-Na pota 92.7 0.15 3.3E-06 57.9 5.3 67 292-373 727-798 (1053)
149 COG0647 NagD Predicted sugar p 92.6 0.14 3E-06 49.2 4.1 50 118-173 8-61 (269)
150 PF12710 HAD: haloacid dehalog 92.5 0.12 2.5E-06 45.9 3.3 33 301-337 157-192 (192)
151 TIGR03333 salvage_mtnX 2-hydro 92.2 0.17 3.7E-06 46.5 4.2 66 300-377 143-212 (214)
152 TIGR02137 HSK-PSP phosphoserin 91.9 0.21 4.5E-06 45.8 4.3 35 140-174 68-102 (203)
153 PRK10826 2-deoxyglucose-6-phos 91.8 0.26 5.7E-06 45.2 5.0 62 301-370 149-216 (222)
154 PRK13478 phosphonoacetaldehyde 91.7 0.56 1.2E-05 44.5 7.2 72 302-379 160-260 (267)
155 KOG0202 Ca2+ transporting ATPa 91.6 1.2 2.6E-05 48.6 10.0 56 294-364 661-719 (972)
156 PF12689 Acid_PPase: Acid Phos 91.5 0.21 4.5E-06 44.6 3.7 57 118-174 3-81 (169)
157 PF00702 Hydrolase: haloacid d 91.5 0.14 3.1E-06 46.0 2.7 33 304-339 182-214 (215)
158 TIGR03333 salvage_mtnX 2-hydro 91.0 0.28 6E-06 45.0 4.2 34 141-174 71-105 (214)
159 PRK08942 D,D-heptose 1,7-bisph 90.7 0.77 1.7E-05 40.9 6.7 48 118-165 3-55 (181)
160 COG0241 HisB Histidinol phosph 89.8 0.28 6.1E-06 44.2 3.0 46 118-163 5-55 (181)
161 PRK10725 fructose-1-P/6-phosph 89.3 0.25 5.4E-06 43.9 2.3 36 301-339 143-178 (188)
162 PRK06769 hypothetical protein; 88.6 0.7 1.5E-05 41.1 4.7 64 302-373 95-171 (173)
163 TIGR02254 YjjG/YfnB HAD superf 88.6 1 2.2E-05 40.9 5.9 65 301-373 153-224 (224)
164 TIGR03351 PhnX-like phosphonat 88.0 0.86 1.9E-05 41.6 5.0 65 301-373 146-219 (220)
165 PRK14988 GMP/IMP nucleotidase; 88.0 0.86 1.9E-05 42.2 5.0 67 302-376 151-221 (224)
166 TIGR01422 phosphonatase phosph 87.7 1.2 2.6E-05 41.7 5.9 64 302-373 158-252 (253)
167 TIGR01489 DKMTPPase-SF 2,3-dik 87.7 0.63 1.4E-05 41.0 3.8 15 118-132 1-15 (188)
168 TIGR02252 DREG-2 REG-2-like, H 87.5 0.37 7.9E-06 43.5 2.2 34 303-339 163-197 (203)
169 PRK13288 pyrophosphatase PpaX; 87.4 0.35 7.7E-06 44.0 2.1 15 118-132 3-17 (214)
170 PRK11587 putative phosphatase; 87.4 0.32 7E-06 44.6 1.8 60 302-369 140-203 (218)
171 PRK11590 hypothetical protein; 87.3 0.33 7.1E-06 44.5 1.8 42 299-351 161-202 (211)
172 TIGR01548 HAD-SF-IA-hyp1 haloa 87.2 0.3 6.6E-06 44.0 1.5 32 302-336 163-194 (197)
173 PRK11590 hypothetical protein; 87.2 0.7 1.5E-05 42.3 3.9 15 117-131 5-19 (211)
174 PLN02575 haloacid dehalogenase 87.1 1.7 3.8E-05 43.7 6.9 73 301-380 273-349 (381)
175 COG0474 MgtA Cation transport 86.9 0.73 1.6E-05 51.8 4.5 60 290-364 618-680 (917)
176 PF05152 DUF705: Protein of un 86.9 3 6.5E-05 40.1 8.0 61 112-174 116-177 (297)
177 TIGR02253 CTE7 HAD superfamily 86.8 0.89 1.9E-05 41.4 4.4 60 302-369 152-220 (221)
178 PLN02770 haloacid dehalogenase 86.2 0.44 9.5E-06 44.8 2.0 60 301-368 165-230 (248)
179 KOG0207 Cation transport ATPas 85.9 1.4 3E-05 48.5 5.7 69 291-374 766-838 (951)
180 TIGR02400 trehalose_OtsA alpha 85.8 0.12 2.5E-06 53.4 -2.2 47 55-105 400-455 (456)
181 TIGR01545 YfhB_g-proteo haloac 85.8 0.9 1.9E-05 41.8 3.8 42 299-351 160-201 (210)
182 PRK09449 dUMP phosphatase; Pro 85.8 2.6 5.7E-05 38.4 7.0 65 303-374 153-223 (224)
183 COG4359 Uncharacterized conser 85.7 1.4 3.1E-05 39.7 4.8 36 296-339 143-178 (220)
184 PRK10748 flavin mononucleotide 85.7 0.56 1.2E-05 43.8 2.5 64 301-372 164-237 (238)
185 PRK11587 putative phosphatase; 85.6 2.1 4.6E-05 39.1 6.3 29 118-155 3-31 (218)
186 TIGR02009 PGMB-YQAB-SF beta-ph 85.3 0.46 1E-05 41.9 1.6 35 302-339 144-178 (185)
187 TIGR00213 GmhB_yaeD D,D-heptos 85.0 1.5 3.2E-05 38.9 4.7 61 302-370 108-175 (176)
188 KOG0206 P-type ATPase [General 84.9 0.81 1.8E-05 52.0 3.6 40 300-348 780-819 (1151)
189 TIGR03351 PhnX-like phosphonat 84.6 0.63 1.4E-05 42.5 2.2 28 119-155 2-29 (220)
190 TIGR01993 Pyr-5-nucltdase pyri 84.6 0.91 2E-05 40.2 3.2 35 302-339 143-177 (184)
191 COG3700 AphA Acid phosphatase 83.6 2.9 6.3E-05 37.6 5.8 79 96-174 40-149 (237)
192 TIGR01990 bPGM beta-phosphoglu 83.4 0.92 2E-05 39.9 2.7 36 301-339 142-177 (185)
193 PRK13225 phosphoglycolate phos 83.2 0.77 1.7E-05 44.1 2.3 56 88-155 34-90 (273)
194 PRK10826 2-deoxyglucose-6-phos 83.2 0.71 1.5E-05 42.3 1.9 18 115-132 4-21 (222)
195 TIGR01422 phosphonatase phosph 83.1 1.1 2.4E-05 42.0 3.3 15 118-132 2-16 (253)
196 PHA02597 30.2 hypothetical pro 83.1 0.58 1.3E-05 42.0 1.3 60 302-369 132-194 (197)
197 PLN02770 haloacid dehalogenase 83.1 2.4 5.2E-05 39.8 5.6 15 118-132 22-36 (248)
198 COG4087 Soluble P-type ATPase 82.6 1.2 2.7E-05 37.9 2.9 48 122-175 18-65 (152)
199 PRK06698 bifunctional 5'-methy 82.5 3.2 7E-05 42.7 6.7 66 301-376 386-456 (459)
200 KOG3120 Predicted haloacid deh 82.3 2.7 5.9E-05 39.0 5.3 89 287-380 150-250 (256)
201 PLN02779 haloacid dehalogenase 82.3 0.75 1.6E-05 44.4 1.8 60 302-369 204-268 (286)
202 TIGR02254 YjjG/YfnB HAD superf 82.2 0.85 1.8E-05 41.4 2.0 50 304-354 124-180 (224)
203 TIGR01493 HAD-SF-IA-v2 Haloaci 81.9 1 2.3E-05 39.3 2.4 30 303-335 142-171 (175)
204 PLN03243 haloacid dehalogenase 81.7 3 6.6E-05 39.6 5.7 62 302-371 167-232 (260)
205 TIGR01494 ATPase_P-type ATPase 81.7 1.8 3.9E-05 45.1 4.5 65 291-373 387-453 (499)
206 TIGR02253 CTE7 HAD superfamily 81.7 2.9 6.4E-05 37.9 5.4 34 118-156 2-35 (221)
207 PRK14988 GMP/IMP nucleotidase; 81.5 0.73 1.6E-05 42.7 1.3 14 118-131 10-23 (224)
208 PRK13226 phosphoglycolate phos 81.4 0.7 1.5E-05 42.8 1.2 28 119-155 13-40 (229)
209 PLN02779 haloacid dehalogenase 80.4 3.3 7.2E-05 39.9 5.5 16 117-132 39-54 (286)
210 TIGR01549 HAD-SF-IA-v1 haloaci 80.2 0.82 1.8E-05 39.1 1.1 34 301-338 119-152 (154)
211 TIGR01545 YfhB_g-proteo haloac 80.2 1 2.2E-05 41.4 1.8 16 117-132 4-19 (210)
212 PRK13223 phosphoglycolate phos 80.1 0.9 1.9E-05 43.5 1.5 29 118-155 13-41 (272)
213 TIGR01458 HAD-SF-IIA-hyp3 HAD- 80.0 5.8 0.00013 37.5 7.0 50 119-170 2-52 (257)
214 COG0546 Gph Predicted phosphat 80.0 1.1 2.4E-05 41.2 2.0 47 304-353 117-171 (220)
215 PRK10563 6-phosphogluconate ph 79.0 1.3 2.9E-05 40.4 2.2 36 301-339 143-178 (221)
216 TIGR01544 HAD-SF-IE haloacid d 78.9 2.1 4.5E-05 41.3 3.5 57 117-173 21-90 (277)
217 PRK13222 phosphoglycolate phos 78.6 1.1 2.4E-05 40.8 1.6 15 117-131 5-19 (226)
218 PRK13478 phosphonoacetaldehyde 78.2 1.2 2.6E-05 42.2 1.7 16 117-132 3-18 (267)
219 TIGR01428 HAD_type_II 2-haloal 77.7 2 4.3E-05 38.5 2.9 34 303-339 151-184 (198)
220 COG0637 Predicted phosphatase/ 77.5 1.4 3E-05 40.8 1.9 33 304-339 146-178 (221)
221 KOG1615 Phosphoserine phosphat 76.8 1.8 4E-05 39.4 2.3 36 299-339 157-192 (227)
222 PRK06698 bifunctional 5'-methy 76.3 0.84 1.8E-05 47.1 0.0 29 119-152 242-270 (459)
223 PLN02645 phosphoglycolate phos 76.1 9.1 0.0002 37.3 7.3 66 302-374 232-308 (311)
224 PLN03243 haloacid dehalogenase 75.9 1.5 3.2E-05 41.8 1.6 14 118-131 24-37 (260)
225 PF06888 Put_Phosphatase: Puta 75.6 4 8.6E-05 38.4 4.4 34 141-174 72-108 (234)
226 KOG1615 Phosphoserine phosphat 75.5 4.3 9.4E-05 37.0 4.3 34 140-173 88-122 (227)
227 PRK09449 dUMP phosphatase; Pro 74.9 1.6 3.4E-05 39.9 1.5 49 305-354 123-178 (224)
228 COG3882 FkbH Predicted enzyme 73.8 11 0.00024 39.0 7.2 63 113-175 217-291 (574)
229 TIGR02247 HAD-1A3-hyp Epoxide 71.3 2.3 4.9E-05 38.5 1.6 34 303-339 155-188 (211)
230 PRK10563 6-phosphogluconate ph 71.2 3.9 8.4E-05 37.3 3.2 16 117-132 3-18 (221)
231 TIGR01261 hisB_Nterm histidino 70.8 3.3 7.2E-05 36.4 2.5 36 301-339 104-139 (161)
232 TIGR01662 HAD-SF-IIIA HAD-supe 70.5 6.5 0.00014 32.7 4.1 36 301-339 86-123 (132)
233 PLN02940 riboflavin kinase 69.2 2.6 5.6E-05 42.5 1.6 61 301-369 151-216 (382)
234 KOG3120 Predicted haloacid deh 68.4 12 0.00026 34.9 5.6 21 113-133 8-28 (256)
235 PRK09456 ?-D-glucose-1-phospha 67.4 7.2 0.00016 35.0 4.0 35 302-339 143-177 (199)
236 PRK10748 flavin mononucleotide 67.3 14 0.00031 34.2 6.2 16 117-132 9-24 (238)
237 PLN02940 riboflavin kinase 67.3 9.8 0.00021 38.3 5.3 29 118-155 11-39 (382)
238 PF00702 Hydrolase: haloacid d 65.7 3.8 8.2E-05 36.6 1.8 46 304-353 155-204 (215)
239 PRK10444 UMP phosphatase; Prov 65.0 19 0.00041 33.9 6.5 62 301-369 175-245 (248)
240 KOG0203 Na+/K+ ATPase, alpha s 64.9 14 0.0003 40.8 6.0 37 322-363 707-746 (1019)
241 TIGR01509 HAD-SF-IA-v3 haloaci 64.8 2.9 6.3E-05 36.4 0.9 34 303-339 143-176 (183)
242 TIGR01656 Histidinol-ppas hist 64.3 5.7 0.00012 34.0 2.6 36 301-339 102-137 (147)
243 COG1011 Predicted hydrolase (H 64.1 4.3 9.3E-05 36.9 1.9 65 303-375 157-228 (229)
244 TIGR01681 HAD-SF-IIIC HAD-supe 64.1 9.2 0.0002 32.0 3.8 35 301-338 90-126 (128)
245 TIGR01990 bPGM beta-phosphoglu 63.3 6.3 0.00014 34.5 2.8 28 120-156 1-28 (185)
246 PF06941 NT5C: 5' nucleotidase 63.1 4.2 9E-05 36.5 1.6 14 118-131 1-15 (191)
247 PRK09456 ?-D-glucose-1-phospha 62.8 4.5 9.7E-05 36.4 1.7 48 329-376 140-197 (199)
248 COG1011 Predicted hydrolase (H 62.7 23 0.0005 32.0 6.5 48 305-353 127-180 (229)
249 PF11019 DUF2608: Protein of u 62.2 31 0.00066 32.7 7.4 35 299-336 160-194 (252)
250 TIGR02009 PGMB-YQAB-SF beta-ph 61.7 7.8 0.00017 33.9 3.1 28 119-155 2-29 (185)
251 PLN02811 hydrolase 60.6 15 0.00033 33.5 4.9 44 302-352 139-185 (220)
252 KOG3109 Haloacid dehalogenase- 59.9 9.8 0.00021 35.4 3.3 69 290-369 155-223 (244)
253 KOG0204 Calcium transporting A 59.7 42 0.00092 37.3 8.5 34 141-174 648-682 (1034)
254 TIGR01511 ATPase-IB1_Cu copper 59.2 15 0.00033 39.0 5.2 59 115-175 382-441 (562)
255 COG2503 Predicted secreted aci 59.2 12 0.00027 35.3 3.9 34 99-132 60-93 (274)
256 PRK08238 hypothetical protein; 59.1 8.1 0.00018 40.2 3.1 42 300-354 127-168 (479)
257 PRK04128 1-(5-phosphoribosyl)- 58.7 25 0.00054 32.8 6.0 55 110-174 36-93 (228)
258 KOG1618 Predicted phosphatase 58.4 13 0.00028 36.6 4.0 42 115-162 32-78 (389)
259 TIGR01452 PGP_euk phosphoglyco 58.2 14 0.0003 35.3 4.3 43 303-353 205-249 (279)
260 PF13419 HAD_2: Haloacid dehal 57.8 8.6 0.00019 32.6 2.6 36 301-339 134-169 (176)
261 TIGR01509 HAD-SF-IA-v3 haloaci 57.5 18 0.00038 31.4 4.6 12 121-132 2-13 (183)
262 KOG2116 Protein involved in pl 56.9 13 0.00027 39.9 3.9 77 116-194 528-617 (738)
263 TIGR01668 YqeG_hyp_ppase HAD s 56.3 26 0.00057 30.8 5.5 45 301-353 92-138 (170)
264 KOG2134 Polynucleotide kinase 55.8 9.2 0.0002 38.4 2.7 79 114-192 71-172 (422)
265 cd02966 TlpA_like_family TlpA- 55.3 26 0.00055 27.1 4.8 81 94-189 28-112 (116)
266 PLN02177 glycerol-3-phosphate 55.2 14 0.0003 38.8 3.9 42 299-352 174-215 (497)
267 PHA02597 30.2 hypothetical pro 55.0 16 0.00036 32.5 4.0 15 118-132 2-16 (197)
268 TIGR01686 FkbH FkbH-like domai 55.0 26 0.00056 34.3 5.7 36 301-339 87-122 (320)
269 TIGR01428 HAD_type_II 2-haloal 54.9 13 0.00027 33.2 3.3 36 304-340 120-158 (198)
270 TIGR02247 HAD-1A3-hyp Epoxide 53.4 27 0.00059 31.4 5.2 14 119-132 3-16 (211)
271 PRK10725 fructose-1-P/6-phosph 51.7 15 0.00032 32.3 3.2 30 117-155 4-33 (188)
272 PLN02919 haloacid dehalogenase 51.2 7.5 0.00016 44.5 1.4 60 302-369 220-285 (1057)
273 cd03788 GT1_TPS Trehalose-6-Ph 51.1 2.5 5.4E-05 43.6 -2.3 46 55-104 405-459 (460)
274 TIGR01549 HAD-SF-IA-v1 haloaci 51.1 15 0.00033 31.1 3.0 27 120-155 1-27 (154)
275 TIGR01548 HAD-SF-IA-hyp1 haloa 50.1 13 0.00028 33.2 2.6 36 304-340 134-171 (197)
276 COG5083 SMP2 Uncharacterized p 49.9 14 0.00031 37.7 2.9 79 115-193 372-461 (580)
277 PF04312 DUF460: Protein of un 49.7 14 0.00031 31.7 2.5 47 121-172 46-95 (138)
278 PRK11033 zntA zinc/cadmium/mer 47.7 33 0.00071 37.8 5.6 66 110-177 540-606 (741)
279 COG4996 Predicted phosphatase 47.6 35 0.00077 29.3 4.5 56 119-174 1-76 (164)
280 KOG0208 Cation transport ATPas 47.4 18 0.0004 40.5 3.5 61 301-373 840-902 (1140)
281 TIGR01456 CECR5 HAD-superfamil 47.3 65 0.0014 31.5 7.2 49 321-373 264-320 (321)
282 TIGR00071 hisT_truA pseudourid 46.8 22 0.00048 33.1 3.6 57 118-174 2-59 (227)
283 TIGR01993 Pyr-5-nucltdase pyri 46.8 24 0.00052 31.0 3.7 36 305-341 110-152 (184)
284 TIGR02252 DREG-2 REG-2-like, H 46.6 21 0.00045 31.9 3.3 14 119-132 1-14 (203)
285 COG4359 Uncharacterized conser 44.9 13 0.00029 33.6 1.7 15 117-131 2-16 (220)
286 TIGR01457 HAD-SF-IIA-hyp2 HAD- 44.4 45 0.00098 31.2 5.4 46 301-353 179-225 (249)
287 COG4483 Uncharacterized protei 44.2 15 0.00032 27.4 1.5 27 305-338 6-32 (68)
288 TIGR02399 salt_tol_Pase glucos 43.6 40 0.00086 33.5 4.8 50 114-165 4-53 (389)
289 TIGR01685 MDP-1 magnesium-depe 43.5 43 0.00092 29.9 4.7 36 301-339 108-149 (174)
290 TIGR01491 HAD-SF-IB-PSPlk HAD- 43.1 32 0.00069 30.3 4.0 34 141-174 81-115 (201)
291 TIGR01497 kdpB K+-transporting 41.6 46 0.001 36.3 5.5 63 110-174 418-481 (675)
292 TIGR01493 HAD-SF-IA-v2 Haloaci 40.9 24 0.00052 30.6 2.7 27 120-155 1-27 (175)
293 TIGR01691 enolase-ppase 2,3-di 40.3 27 0.00059 32.4 3.1 36 301-339 153-188 (220)
294 COG0101 TruA Pseudouridylate s 40.1 38 0.00082 32.5 4.1 57 118-174 3-60 (266)
295 KOG2882 p-Nitrophenyl phosphat 39.8 60 0.0013 31.7 5.3 47 121-173 25-72 (306)
296 smart00577 CPDc catalytic doma 38.3 16 0.00035 31.3 1.2 30 306-338 104-133 (148)
297 cd00218 GlcAT-I Beta1,3-glucur 38.2 62 0.0013 30.2 5.0 44 295-342 73-119 (223)
298 TIGR01454 AHBA_synth_RP 3-amin 37.7 38 0.00083 30.2 3.6 35 140-174 75-110 (205)
299 cd04256 AAK_P5CS_ProBA AAK_P5C 37.6 1E+02 0.0022 29.8 6.7 27 111-137 188-214 (284)
300 KOG4549 Magnesium-dependent ph 37.5 74 0.0016 27.1 4.9 54 118-171 18-76 (144)
301 PF13419 HAD_2: Haloacid dehal 37.4 29 0.00063 29.3 2.7 35 140-174 77-112 (176)
302 PHA02530 pseT polynucleotide k 36.3 38 0.00083 32.3 3.6 37 301-339 252-288 (300)
303 PLN02177 glycerol-3-phosphate 35.9 20 0.00044 37.5 1.7 20 154-173 121-140 (497)
304 PRK10671 copA copper exporting 35.8 92 0.002 34.8 6.9 79 94-174 605-685 (834)
305 PF09949 DUF2183: Uncharacteri 35.7 1.3E+02 0.0028 24.3 6.0 36 301-341 50-86 (100)
306 PF09506 Salt_tol_Pase: Glucos 35.2 69 0.0015 31.8 5.0 47 117-165 1-47 (381)
307 TIGR01488 HAD-SF-IB Haloacid D 35.0 49 0.0011 28.5 3.8 34 141-174 74-108 (177)
308 TIGR01449 PGP_bact 2-phosphogl 35.0 47 0.001 29.6 3.8 34 141-174 86-120 (213)
309 PRK05446 imidazole glycerol-ph 34.3 40 0.00087 33.7 3.4 36 301-339 105-140 (354)
310 COG0241 HisB Histidinol phosph 33.2 1.2E+02 0.0027 27.3 6.0 78 266-354 70-152 (181)
311 PTZ00489 glutamate 5-kinase; P 32.6 1.7E+02 0.0037 27.9 7.3 22 111-132 157-178 (264)
312 PF13382 Adenine_deam_C: Adeni 32.5 1.4E+02 0.003 26.6 6.2 55 321-380 66-131 (171)
313 PF12710 HAD: haloacid dehalog 32.0 39 0.00085 29.4 2.7 43 143-185 92-138 (192)
314 PF11019 DUF2608: Protein of u 31.4 58 0.0013 30.8 3.9 28 105-132 5-34 (252)
315 COG1576 Uncharacterized conser 31.2 1.5E+02 0.0033 26.0 6.0 50 108-167 58-108 (155)
316 TIGR01490 HAD-SF-IB-hyp1 HAD-s 30.7 69 0.0015 28.3 4.1 34 141-174 88-122 (202)
317 PLN02919 haloacid dehalogenase 30.2 79 0.0017 36.4 5.3 29 118-155 75-103 (1057)
318 PF03360 Glyco_transf_43: Glyc 30.1 65 0.0014 29.7 3.8 43 296-342 56-101 (207)
319 cd04239 AAK_UMPK-like AAK_UMPK 29.9 1.2E+02 0.0025 28.1 5.5 65 110-174 141-220 (229)
320 PF06342 DUF1057: Alpha/beta h 29.8 98 0.0021 30.1 5.0 57 291-353 79-135 (297)
321 COG2179 Predicted hydrolase of 29.1 93 0.002 27.8 4.4 43 303-352 96-139 (175)
322 KOG0209 P-type ATPase [Inorgan 28.4 44 0.00095 37.1 2.6 28 322-354 808-835 (1160)
323 TIGR01664 DNA-3'-Pase DNA 3'-p 28.1 60 0.0013 28.5 3.1 34 303-339 111-154 (166)
324 PRK14588 tRNA pseudouridine sy 27.9 70 0.0015 30.7 3.8 57 118-174 3-60 (272)
325 PRK13587 1-(5-phosphoribosyl)- 27.5 1.7E+02 0.0036 27.3 6.2 60 102-173 146-211 (234)
326 COG5663 Uncharacterized conser 27.0 29 0.00063 31.0 0.9 11 121-131 9-19 (194)
327 COG2216 KdpB High-affinity K+ 26.6 30 0.00065 36.3 1.0 45 322-371 511-559 (681)
328 PRK14558 pyrH uridylate kinase 26.0 1.5E+02 0.0032 27.4 5.5 65 110-174 141-220 (231)
329 smart00775 LNS2 LNS2 domain. T 25.8 1.1E+02 0.0025 26.5 4.5 37 301-339 102-138 (157)
330 TIGR01512 ATPase-IB2_Cd heavy 25.8 97 0.0021 32.7 4.7 56 117-174 341-398 (536)
331 PRK01122 potassium-transportin 25.5 1.2E+02 0.0026 33.2 5.4 62 111-174 418-480 (679)
332 cd04242 AAK_G5K_ProB AAK_G5K_P 25.4 97 0.0021 29.1 4.2 23 110-132 151-173 (251)
333 PRK10886 DnaA initiator-associ 25.3 2.8E+02 0.0061 25.2 7.0 54 109-175 102-156 (196)
334 KOG3085 Predicted hydrolase (H 25.2 87 0.0019 29.5 3.7 43 304-354 172-216 (237)
335 PRK12314 gamma-glutamyl kinase 25.2 2.4E+02 0.0052 26.8 6.9 23 110-132 163-185 (266)
336 KOG1605 TFIIF-interacting CTD 25.1 41 0.00088 32.2 1.6 18 115-132 86-103 (262)
337 PRK14586 tRNA pseudouridine sy 24.7 99 0.0021 29.1 4.1 57 118-174 3-60 (245)
338 PF06014 DUF910: Bacterial pro 24.7 21 0.00046 26.3 -0.3 26 306-338 7-32 (62)
339 KOG1594 Uncharacterized enzyme 23.4 39 0.00084 32.3 1.0 31 49-79 237-267 (305)
340 TIGR01460 HAD-SF-IIA Haloacid 23.4 1.2E+02 0.0026 28.1 4.4 36 301-339 189-226 (236)
341 PRK14556 pyrH uridylate kinase 23.0 1.7E+02 0.0037 27.7 5.3 63 112-174 161-238 (249)
342 COG1608 Predicted archaeal kin 22.9 3.6E+02 0.0077 25.6 7.2 22 112-133 158-179 (252)
343 PRK00021 truA tRNA pseudouridi 22.8 1.1E+02 0.0023 28.8 3.9 57 118-174 3-60 (244)
344 TIGR00735 hisF imidazoleglycer 22.4 2.9E+02 0.0063 25.9 6.9 80 107-186 113-208 (254)
345 TIGR01544 HAD-SF-IE haloacid d 22.3 1.5E+02 0.0032 28.7 4.8 35 140-174 121-156 (277)
346 CHL00202 argB acetylglutamate 22.1 2.7E+02 0.0059 26.7 6.7 59 110-173 189-247 (284)
347 PF07302 AroM: AroM protein; 21.8 1.1E+02 0.0023 28.6 3.6 59 102-164 33-98 (221)
348 TIGR01691 enolase-ppase 2,3-di 21.8 1.1E+02 0.0023 28.4 3.7 34 141-174 96-130 (220)
349 TIGR01092 P5CS delta l-pyrroli 21.6 2.3E+02 0.005 31.1 6.8 64 110-174 176-265 (715)
350 PLN02499 glycerol-3-phosphate 21.6 82 0.0018 33.0 3.1 14 118-131 8-21 (498)
351 PLN02458 transferase, transfer 21.5 1.5E+02 0.0032 29.4 4.6 35 302-342 190-226 (346)
352 PF06189 5-nucleotidase: 5'-nu 20.9 2.1E+02 0.0045 27.4 5.3 59 116-174 119-205 (264)
353 cd04241 AAK_FomA-like AAK_FomA 20.4 2.9E+02 0.0062 25.7 6.4 21 112-132 158-178 (252)
No 1
>PLN02580 trehalose-phosphatase
Probab=100.00 E-value=1.2e-85 Score=647.68 Aligned_cols=382 Identities=79% Similarity=1.240 Sum_probs=347.6
Q ss_pred CCCCCCCCCCcccCCCCCcccccccccCcccCCCC-CCCCCCcccccccccCCCcccccccchHHHHhcCCCcccccccc
Q 016649 1 MDLKTNHSAPVLTDPAPISKSRLGIHSSLLPYSPS-GTFPSDLFLAIPRKKTGVLDDVRACSWLDAMKSSSPPPKWMAKE 79 (385)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~n~w~~~~~~~s~~~~~~~~~ 79 (385)
|||||||+|||||||+|++++|+|+++++|||+++ ++|+++.+++|||||++++|++++|+|++.|+++||++++..+.
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (384)
T PLN02580 1 MDLKSNHSSPVLTDPAPINKSRLGIRSNLLPYSSAGASFSSNLFLTIPRKKTGKLDDVRSNGWLDAMKSSSPPRKKLNKD 80 (384)
T ss_pred CCcccCCCCcccCCCccccccccccccccccccCCcCcCCCCceeeccccCCCccccccccchhhhhhccCCCccccccc
Confidence 99999999999999999999999999999999999 88999999999999999999999999999999999999876555
Q ss_pred cCcccCccccchhHhHHHHhCCCCCCcHHHHHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEE
Q 016649 80 SNNEFSSTDTDVAYRTWQRQYPSALTSFEQILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTA 159 (385)
Q Consensus 80 ~~~~~~~~~~~~~~~~w~~~~~~~L~~~~~~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~ 159 (385)
+..++++...+.+|++|+.+|||||.+|++|.+|+++++++|||||||||++++++|+.+.++++++++|++|+++++|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~p~al~~~~~~~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~~~VA 160 (384)
T PLN02580 81 FNVELASPDTDFAYRTWMLKYPSALTSFEQIANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKYFPTA 160 (384)
T ss_pred cccccccccchHHHHHHHHhCcHHHHHHHHHHHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhCCCEE
Confidence 54444455667899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EEcCCChhHHHHHhCCcCceEEecCceeEeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhh
Q 016649 160 IISGRSRDKVYEFVGLAELYYAGSHGMDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTK 239 (385)
Q Consensus 160 I~SGR~~~~l~~~~~~~~l~~iaenG~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~ 239 (385)
|+|||+++.+++++++++++|+|+||++++.+.+......|..+++..+.+|++..+++++.+|+++++++++.+.++++
T Consensus 161 IVSGR~~~~L~~~l~~~~l~laGsHG~e~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~ 240 (384)
T PLN02580 161 IISGRSRDKVYELVGLTELYYAGSHGMDIMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTK 240 (384)
T ss_pred EEeCCCHHHHHHHhCCCCccEEEeCCceeecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhc
Confidence 99999999999999999999999999999987654333457766655566666656777878888899999999999999
Q ss_pred hccCcEEeccceeEEEEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCC
Q 016649 240 EINGVKVENNKFCVSVHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCE 319 (385)
Q Consensus 240 ~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~ 319 (385)
+++|++||+|++|++||||+++++.+..+.+.++..+++++ ++++..|++++||+|.+++|||.|+++|++.+|++..+
T Consensus 241 ~~pGs~VE~K~~svavHYR~a~~~~~~~~~~~l~~~l~~~~-~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~g~~~~d 319 (384)
T PLN02580 241 DIKGAKVENHKFCVSVHYRNVDEKNWPLVAQCVHDVLKKYP-RLRLTHGRKVLEVRPVIDWNKGKAVEFLLESLGLSNCD 319 (384)
T ss_pred cCCCCEEEecCcEEEEEeCCCCchHHHHHHHHHHHHHHhCC-ceEEEeCCeEEEEecCCCCCHHHHHHHHHHhcCCCccc
Confidence 99999999999999999999988888888888888888887 79999999999999933999999999999999987643
Q ss_pred CceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCCccceEEeCChhHHHHHHHHHHHhhccc
Q 016649 320 DVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKESKAFYSLRDPSEVMEFLKSFVMWKQSS 383 (385)
Q Consensus 320 ~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~~~~~~~ 383 (385)
...++||||+.|||+||+++++.+.|+||+|+|+++++.|+|+|++|++|++||++|+.|++.+
T Consensus 320 ~~~pi~iGDD~TDedmF~~L~~~~~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~~ 383 (384)
T PLN02580 320 DVLPIYIGDDRTDEDAFKVLREGNRGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKSE 383 (384)
T ss_pred ceeEEEECCCchHHHHHHhhhccCCceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhcC
Confidence 3457999999999999999987667999999999999999999999999999999999999875
No 2
>PLN03017 trehalose-phosphatase
Probab=100.00 E-value=1.3e-65 Score=501.54 Aligned_cols=343 Identities=54% Similarity=0.889 Sum_probs=295.4
Q ss_pred ccccCcccCCCC-CCCCCCcccccccccCCC------cccccccchHHHHhcCCCcccccccccCcccCccccchhHhHH
Q 016649 24 GIHSSLLPYSPS-GTFPSDLFLAIPRKKTGV------LDDVRACSWLDAMKSSSPPPKWMAKESNNEFSSTDTDVAYRTW 96 (385)
Q Consensus 24 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~n~w~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~w 96 (385)
-+++++.-.|.+ +.|.++.+++++|||.+. +++.++|+|+|+|+++||++++..... ...+..|++|
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~w 89 (366)
T PLN03017 16 IIPNNVSNSSNSSSQKLPPGLISISKKKLLKNIDIINGGGQRINAWVDSMRASSPTHLKSLPSS------ISSQQQLNSW 89 (366)
T ss_pred EeeccccCCCCccccCCCCccCCcchhcchhhhccccccccccchHHHHHhccCCCcccccccc------ccchhhhhHH
Confidence 346666555555 446666788999998543 345789999999999999997643221 1236789999
Q ss_pred HHhCCCCCCcHHHHHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhCCc
Q 016649 97 QRQYPSALTSFEQILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVGLA 176 (385)
Q Consensus 97 ~~~~~~~L~~~~~~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~~~ 176 (385)
+.+|||||+.|++|.+++++++++||+||||||+|++++|+.+.++++++++|++|++.++|+|+|||++..+.+++++.
T Consensus 90 ~~~~psal~~~~~~~~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~l~ 169 (366)
T PLN03017 90 IMQHPSALEMFEQIMEASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLAKCFPTAIVTGRCIDKVYNFVKLA 169 (366)
T ss_pred HhhCChHHHHHHHHHHHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHhcCCcEEEEeCCCHHHHHHhhccc
Confidence 99999999999999999999999999999999999999898889999999999999966799999999999999998888
Q ss_pred CceEEecCceeEeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEE
Q 016649 177 ELYYAGSHGMDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVH 256 (385)
Q Consensus 177 ~l~~iaenG~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~ 256 (385)
+++|+|+||++++.+++... .+ .++++..+++++.+|+++++++++.|.++++++||++||+|++|++||
T Consensus 170 ~l~l~g~hGa~i~~p~~~~~--~~--------~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavH 239 (366)
T PLN03017 170 ELYYAGSHGMDIKGPAKGFS--RH--------KRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVH 239 (366)
T ss_pred CceEEEcCCcEEecCCCcce--ec--------cccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEE
Confidence 89999999999998865310 11 111122345666678888999999999999999999999999999999
Q ss_pred eccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHH
Q 016649 257 YRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAF 336 (385)
Q Consensus 257 yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mf 336 (385)
||+++++.+.++..+++.++++++ .++++.|++++||+|.++||||+|+++|++.+|+...++++++|||||.+||+||
T Consensus 240 yR~ad~~~~~~l~~~~~~vl~~~~-~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF 318 (366)
T PLN03017 240 FRCVDEKKWSELVLQVRSVLKNFP-TLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAF 318 (366)
T ss_pred cCcCCHHHHHHHHHHHHHHHHhCC-CcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHH
Confidence 999998888888899999999998 7999999999999996699999999999999998765567999999999999999
Q ss_pred HHHHhCCCceEEEeeCCCCCccceEEeCChhHHHHHHHHHHHhhccc
Q 016649 337 KELREGNHGYGILVSSVPKESKAFYSLRDPSEVMEFLKSFVMWKQSS 383 (385)
Q Consensus 337 k~~~~~~~g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~~~~~~~ 383 (385)
+++++.+.|+||.||..+++|.|+|+|++|++|++||++|+.|++..
T Consensus 319 ~~L~~~~~G~gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~~ 365 (366)
T PLN03017 319 KMLRDRGEGFGILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQMQ 365 (366)
T ss_pred HHHhhcCCceEEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhhc
Confidence 99988777999999987888999999999999999999999999864
No 3
>PLN02151 trehalose-phosphatase
Probab=100.00 E-value=7.9e-62 Score=473.58 Aligned_cols=315 Identities=56% Similarity=0.937 Sum_probs=275.4
Q ss_pred cccccc-CCCccc----ccccchHHHHhcCCCcccccccccCcccCccccchhHhHHHHhCCCCCCcHHHHHHHhcCCCE
Q 016649 45 AIPRKK-TGVLDD----VRACSWLDAMKSSSPPPKWMAKESNNEFSSTDTDVAYRTWQRQYPSALTSFEQILKSAKGKRI 119 (385)
Q Consensus 45 ~~~~~~-~~~~~~----~~~n~w~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~L~~~~~~~~~~~~k~~ 119 (385)
++++|| ...++. .++|+|+|+|+++||++.+. ..+|.+|+.+|||||+.|+++...++++++
T Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~w~~~~p~a~~~~~~~~~~~~~~~~ 99 (354)
T PLN02151 33 TSPKTKALHDFQINNGGGLIRSWVDSMRACSPTRPKS-------------FNKQSCWIKEHPSALNMFEEILHKSEGKQI 99 (354)
T ss_pred cchhhhHhhhhhhhccccccchHHHHHhccCCCcccc-------------hhhHHHHHHhCChHHHHHHHHHHhhcCCce
Confidence 344454 445543 57999999999999999652 147899999999999999999999999999
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhCCcCceEEecCceeEeCCCCCCCCCC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVGLAELYYAGSHGMDIMGPVRQSIPND 199 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~~~~l~~iaenG~~I~~~~~~~~~~~ 199 (385)
+|||||||||+|++++|+.+.++++++++|++|++.++|+|+|||++..+.+++++++++|+|+||++++.+++.. .
T Consensus 100 ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~~~~vaIvSGR~~~~l~~~~~~~~l~laGsHG~e~~~p~~g~---~ 176 (354)
T PLN02151 100 VMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAKCFPTAIVSGRCREKVSSFVKLTELYYAGSHGMDIKGPEQGS---K 176 (354)
T ss_pred EEEEecCccCCCCCCCcccccCCHHHHHHHHHHhcCCCEEEEECCCHHHHHHHcCCccceEEEeCCceeecCCCCc---c
Confidence 9999999999999999999999999999999999888999999999999999999999999999999999875321 2
Q ss_pred CcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHHHHHHHHHHHHhC
Q 016649 200 NADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWATVVQRVHEILKQY 279 (385)
Q Consensus 200 ~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~v~~~l~~~ 279 (385)
|.. .++...++++.+|.++++++++.+.++++++||++||+|++|++||||+++++.+.++.+.+..+++++
T Consensus 177 ~~~--------~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~~~~~l~~~l~~v~~~~ 248 (354)
T PLN02151 177 YKK--------ENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEENKWSDLANQVRSVLKNY 248 (354)
T ss_pred ccc--------cccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChHHHHHHHHHHHHHHhhC
Confidence 321 011123455667778888899888888889999999999999999999999877777888888889888
Q ss_pred CCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCCccc
Q 016649 280 PTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKESKA 359 (385)
Q Consensus 280 ~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A 359 (385)
+ .++++.|++++||+|.++||||+|+++|++.+++....+++++|||||.+||+||+++++.++|+||.|+.++++|.|
T Consensus 249 ~-~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~~G~gI~Vg~~~k~T~A 327 (354)
T PLN02151 249 P-KLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKKQGLGILVSKYAKETNA 327 (354)
T ss_pred C-CcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcCCCccEEeccCCCCCcc
Confidence 8 799999999999999559999999999999999876556789999999999999999988777999999988889999
Q ss_pred eEEeCChhHHHHHHHHHHHhhcccC
Q 016649 360 FYSLRDPSEVMEFLKSFVMWKQSSA 384 (385)
Q Consensus 360 ~y~l~~~~eV~~~L~~L~~~~~~~~ 384 (385)
+|+|++|++|++||++|+.|++.+.
T Consensus 328 ~y~L~dp~eV~~~L~~L~~~~~~~~ 352 (354)
T PLN02151 328 SYSLQEPDEVMEFLERLVEWKQLRC 352 (354)
T ss_pred eEeCCCHHHHHHHHHHHHHhhhccc
Confidence 9999999999999999999998764
No 4
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=7.9e-45 Score=391.80 Aligned_cols=294 Identities=22% Similarity=0.337 Sum_probs=238.2
Q ss_pred ccccccch--------HHHHhcCCCcccccccccCcccCccccchhHhHHHHhCCCCCCc--------------------
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKESNNEFSSTDTDVAYRTWQRQYPSALTS-------------------- 106 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~L~~-------------------- 106 (385)
++++|||| |++||+|+++||+.|++... .++.+|+...|+.+|...|..
T Consensus 495 ~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~---~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~ 571 (854)
T PLN02205 495 GAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHY---RYVSTHDVGYWARSFLQDLERTCRDHSRRRCWGIGFGLSFR 571 (854)
T ss_pred cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHH---HHHhhCCHHHHHHHHHHHHHHHHHHHhhhhhcccccccccc
Confidence 38999999 88899999999998877332 389999999999886544322
Q ss_pred -------H-----HHH-HHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc-C-CEEEEcCCChhHHHH
Q 016649 107 -------F-----EQI-LKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY-F-PTAIISGRSRDKVYE 171 (385)
Q Consensus 107 -------~-----~~~-~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~-~v~I~SGR~~~~l~~ 171 (385)
| +.+ .+|.++++++||+||||||++... ....++++++++|++|+++ . .|+|+|||++..+++
T Consensus 572 ~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~--~~~~p~~~~~~~L~~L~~d~g~~VaIvSGR~~~~L~~ 649 (854)
T PLN02205 572 VVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQAS--IDKSPSSKSIDILNTLCRDKNNMVFIVSARSRKTLAD 649 (854)
T ss_pred cccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCcc--ccCCCCHHHHHHHHHHHhcCCCEEEEEeCCCHHHHHH
Confidence 1 233 389999999999999999998653 2457789999999999776 3 899999999999999
Q ss_pred HhCC-cCceEEecCceeEeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccc
Q 016649 172 FVGL-AELYYAGSHGMDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNK 250 (385)
Q Consensus 172 ~~~~-~~l~~iaenG~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~ 250 (385)
+|+. +++++||+||++++.+++. .|..+.... . ..|.+.+...++.+++++||+++|.++
T Consensus 650 ~f~~~~~l~laaEHG~~ir~~~~~----~w~~~~~~~------------~---~~w~~~v~~i~~~y~ertpGs~IE~K~ 710 (854)
T PLN02205 650 WFSPCEKLGIAAEHGYFLRLKRDV----EWETCVPVA------------D---CSWKQIAEPVMQLYTETTDGSTIEDKE 710 (854)
T ss_pred HhCCCCCeEEEEeCCEEEEeCCCc----eeeecchhh------------h---HHHHHHHHHHHHHHhcCCCchhheecc
Confidence 9984 6799999999999987653 343221100 0 124555666677788999999999999
Q ss_pred eeEEEEeccCChhhH----HHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHH---cCCCCCCCceE
Q 016649 251 FCVSVHYRNVDEKYW----ATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLES---LGLNNCEDVLP 323 (385)
Q Consensus 251 ~~l~~~yr~~d~~~~----~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~---lg~~~~~~~~v 323 (385)
+++.||||.++++.. .++..+++..+.+.+ +.+.+|++++||+|+ |+|||.|+++|++. +|++. +++
T Consensus 711 ~slv~HyR~adpd~~~~qa~el~~~l~~~l~~~~--~~v~~G~~vvEV~p~-gvnKG~Al~~Ll~~~~~~g~~~---d~v 784 (854)
T PLN02205 711 TALVWCYEDADPDFGSCQAKELLDHLESVLANEP--VTVKSGQNIVEVKPQ-GVSKGLVAKRLLSIMQERGMLP---DFV 784 (854)
T ss_pred eEEEEehhhCChHHhhhhhHHHHHHHHHHHhcCc--eEEEECCcEEEEEeC-CCCHHHHHHHHHHHHHhcCCCc---ccE
Confidence 999999999987654 356666777777665 788899999999999 99999999999865 46654 499
Q ss_pred EEEeCCCCCHHHHHHHHhCCC---------ceEEEeeCCCCCccceEEeCChhHHHHHHHHHHHhh
Q 016649 324 IYVGDDRTDEDAFKELREGNH---------GYGILVSSVPKESKAFYSLRDPSEVMEFLKSFVMWK 380 (385)
Q Consensus 324 i~~GD~~nDe~mfk~~~~~~~---------g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~~~~ 380 (385)
+||||+.|||+||++++.... +++|.|| .+.|.|+|+|+++++|.++|+.|+...
T Consensus 785 l~~GDD~nDedMF~~~~~~~~g~~~~~~~~~~~v~VG--~~~S~A~y~L~d~~eV~~lL~~L~~~~ 848 (854)
T PLN02205 785 LCIGDDRSDEDMFEVITSSMAGPSIAPRAEVFACTVG--QKPSKAKYYLDDTAEIVRLMQGLASVS 848 (854)
T ss_pred EEEcCCccHHHHHHHhhhhccCCcccccccceeEEEC--CCCccCeEecCCHHHHHHHHHHHHhcc
Confidence 999999999999999974322 4888887 578999999999999999999998754
No 5
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=7.2e-43 Score=375.53 Aligned_cols=299 Identities=18% Similarity=0.251 Sum_probs=240.0
Q ss_pred ccccccch--------HHHHhcCCCcccccccccCcccCccccchhHhHHHHhCCCCCCcH------------------H
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKESNNEFSSTDTDVAYRTWQRQYPSALTSF------------------E 108 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~L~~~------------------~ 108 (385)
.+++|||| |..||+|+++||+.++.... .++..|+...|+..|...|..- .
T Consensus 505 ~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~---~~V~~~d~~~Wa~~fl~~L~~~~~~~~~~~~~~~~~l~~~~ 581 (934)
T PLN03064 505 GAILVNPWNITEVAASIAQALNMPEEEREKRHRHNF---MHVTTHTAQEWAETFVSELNDTVVEAQLRTRQVPPQLPPED 581 (934)
T ss_pred ceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH---hhcccCCHHHHHHHHHHHHHHHHhhhhccccccCCCCCHHH
Confidence 47999999 88899999999998866322 3788999999998865544321 2
Q ss_pred HHHHHhcCCCEEEEEecCCccCCCCCCCC---------cccCCHHHHHHHHHHHhcC--CEEEEcCCChhHHHHHhCCcC
Q 016649 109 QILKSAKGKRIALFLDYDGTLSPIVDNPD---------CAFMSDAMRAVVKNVAKYF--PTAIISGRSRDKVYEFVGLAE 177 (385)
Q Consensus 109 ~~~~~~~~k~~li~lD~DGTL~~~~~~p~---------~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~~~~ 177 (385)
.+.+|.++++++|||||||||++++++|+ .+.++++++++|++|++++ .|+|+|||+++.++++++..+
T Consensus 582 ~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~~ 661 (934)
T PLN03064 582 AIQRYLQSNNRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEFD 661 (934)
T ss_pred HHHHHHhccceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCCC
Confidence 25589999999999999999999998887 6678999999999999984 899999999999999999778
Q ss_pred ceEEecCceeEeCCCCCCCCCCCcc-cccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEE
Q 016649 178 LYYAGSHGMDIMGPVRQSIPNDNAD-TIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVH 256 (385)
Q Consensus 178 l~~iaenG~~I~~~~~~~~~~~~~~-~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~ 256 (385)
++++|+||++++.+++ .|.. +.+.. -..|.+.+..+|+++++++||++||.|++++.||
T Consensus 662 L~LaAEHG~~~R~~~~-----~w~~~~~~~~---------------~~~W~~~v~~ile~~~eRtPGS~IE~K~~SLawH 721 (934)
T PLN03064 662 MWLAAENGMFLRHTKG-----EWMTTMPEHL---------------NMDWVDSVKHVFEYFTERTPRSHFETRETSLVWN 721 (934)
T ss_pred ceEEeeCCeEEecCCC-----cceecccccc---------------chHHHHHHHHHHHHHHhcCCCcEEEEcCcEEEEE
Confidence 9999999999997754 3531 11000 0247888889999999999999999999999999
Q ss_pred eccCChhhHHH----HHHHH-HHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCC---CCCCceEEEEeC
Q 016649 257 YRNVDEKYWAT----VVQRV-HEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLN---NCEDVLPIYVGD 328 (385)
Q Consensus 257 yr~~d~~~~~~----l~~~v-~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~---~~~~~~vi~~GD 328 (385)
||++|++.... +.+++ ...+... .+++..|++++||+|. |+|||.|++.|++.+.-+ ...+||++|+||
T Consensus 722 YR~ADpe~g~~qA~el~~~L~~~~~~~~--~v~V~~Gk~VVEVrP~-gvnKG~Av~~ll~~~~~~~~~~~~~DFvlc~GD 798 (934)
T PLN03064 722 YKYADVEFGRLQARDMLQHLWTGPISNA--AVDVVQGSRSVEVRPV-GVTKGAAIDRILGEIVHSKSMTTPIDYVLCIGH 798 (934)
T ss_pred ecCCChhhHHHHHHHHHHHHHhhhccCC--CcEEEeCCeEEEEEcC-CCCHHHHHHHHHHhhhhccccCCCCCEEEEeCC
Confidence 99998776443 33333 2223333 4899999999999999 999999999999976311 113579999999
Q ss_pred CCC-CHHHHHHHHhC-C---------------------------------------------------------------
Q 016649 329 DRT-DEDAFKELREG-N--------------------------------------------------------------- 343 (385)
Q Consensus 329 ~~n-De~mfk~~~~~-~--------------------------------------------------------------- 343 (385)
+.+ ||+||+++..- .
T Consensus 799 d~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 878 (934)
T PLN03064 799 FLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKNSQGKKQRSLLSSAKSGVNHAASHGSDR 878 (934)
T ss_pred CCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccccccccCCcccccccccccccccCCccc
Confidence 875 99999997530 0
Q ss_pred -----------------CceEEEeeCCCCCccceEEeCChhHHHHHHHHHHHhhc
Q 016649 344 -----------------HGYGILVSSVPKESKAFYSLRDPSEVMEFLKSFVMWKQ 381 (385)
Q Consensus 344 -----------------~g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~~~~~ 381 (385)
+-|+++|| .+.+.|.|.|++.++|..||+.|++...
T Consensus 879 ~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (934)
T PLN03064 879 RPSPEKIGWSVLDLKGENYFSCAVG--RKRSNARYLLGSSDDVVSFLKELANASS 931 (934)
T ss_pred cCCccccccccccccCcceEEEEec--cccccceeecCCHHHHHHHHHHHhcccc
Confidence 01666776 6779999999999999999999987653
No 6
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=3.4e-42 Score=370.93 Aligned_cols=298 Identities=16% Similarity=0.196 Sum_probs=237.7
Q ss_pred ccccccch--------HHHHhcCCCcccccccccCcccCccccchhHhHHHHhCCCCCCc-----------------HH-
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKESNNEFSSTDTDVAYRTWQRQYPSALTS-----------------FE- 108 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~L~~-----------------~~- 108 (385)
.+++|||| |..||+|+++||+.++.... .++..++...|..+|.+.|.. .+
T Consensus 421 ~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~---~~v~~~~~~~Wa~~fl~~l~~~~~~~~~~~~~~~~~l~~~~ 497 (797)
T PLN03063 421 GALLVNPWNITEVSSAIKEALNMSDEERETRHRHNF---QYVKTHSAQKWADDFMSELNDIIVEAELRTRNIPLELPEQD 497 (797)
T ss_pred CeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHH---HhhhhCCHHHHHHHHHHHHHHHhhhhhhcccCCCCCCCHHH
Confidence 47999999 88899999999998866322 378889999999886544422 12
Q ss_pred HHHHHhcCCCEEEEEecCCccCCCCCC---CCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhHHHHHhCCcCceEEec
Q 016649 109 QILKSAKGKRIALFLDYDGTLSPIVDN---PDCAFMSDAMRAVVKNVAKYF--PTAIISGRSRDKVYEFVGLAELYYAGS 183 (385)
Q Consensus 109 ~~~~~~~~k~~li~lD~DGTL~~~~~~---p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~~~~l~~iae 183 (385)
.+.+|+++++++|||||||||+++.++ |..+.++++++++|++|++++ .|+|+|||+.+.++++++..+++++|+
T Consensus 498 ~~~~y~~a~~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~~l~l~ae 577 (797)
T PLN03063 498 VIQQYSKSNNRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEYNIWLAAE 577 (797)
T ss_pred HHHHHHhccCeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCCCCcEEEe
Confidence 255899999999999999999998653 466789999999999999984 899999999999999999778999999
Q ss_pred CceeEeCCCCCCCCCCCcccccccCcCCCcccccccccc-ccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCCh
Q 016649 184 HGMDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPARE-FLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDE 262 (385)
Q Consensus 184 nG~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~-~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~ 262 (385)
||++++.+++ .|..... .. -..|.+.+...++++++++||++||.|++++.||||++++
T Consensus 578 HG~~~r~~~~-----~w~~~~~---------------~~~~~~w~~~v~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp 637 (797)
T PLN03063 578 NGMFLRHTSG-----EWVTTMP---------------EHMNLDWVDGVKNVFKYFTDRTPRSYVEKSETSLVWNYEYADV 637 (797)
T ss_pred CCEEEecCCC-----ceeeccc---------------cccChhHHHHHHHHHHHHHHhCCCcEEEEcCeEEEEEcCCCCh
Confidence 9999987654 3432110 00 0247788889999999999999999999999999999987
Q ss_pred hhHHHHHHHHHHH-----HHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCC---CCCCCceEEEEeCCC-CCH
Q 016649 263 KYWATVVQRVHEI-----LKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGL---NNCEDVLPIYVGDDR-TDE 333 (385)
Q Consensus 263 ~~~~~l~~~v~~~-----l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~---~~~~~~~vi~~GD~~-nDe 333 (385)
+.....+.++... +... .+++..|++++||+|. |+|||.|++.|++.+.. .....+|++|+||+. +||
T Consensus 638 ~~g~~~a~el~~~l~~~~~~~~--~~~v~~Gk~vvEvrp~-gvnKG~Av~~ll~~~~~~~~~~~~~dfvl~~Gdd~~~DE 714 (797)
T PLN03063 638 EFGRAQARDMLQHLWAGPISNA--SVDVVRGQKSVEVHAI-GVTKGAAIGRILGEIVHNKSMTTPIDFVFCSGYFLEKDE 714 (797)
T ss_pred HHHHHHHHHHHHHHHHhhccCC--CcEEEECCeEEEEEcC-CCChHHHHHHHHHHhhhccccCCCCCEEEEeCCCCCCcH
Confidence 7543333332222 2233 4899999999999999 99999999999998721 111356999999985 599
Q ss_pred HHHHHHHhCC----------------------------CceEEEeeCCCCCccceEEeCChhHHHHHHHHHHHhh
Q 016649 334 DAFKELREGN----------------------------HGYGILVSSVPKESKAFYSLRDPSEVMEFLKSFVMWK 380 (385)
Q Consensus 334 ~mfk~~~~~~----------------------------~g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~~~~ 380 (385)
+||+++.... .-|+|.|| .+.|.|+|+|++++||.++|+.|+...
T Consensus 715 dmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG--~~~s~A~y~l~~~~eV~~lL~~l~~~~ 787 (797)
T PLN03063 715 DVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIG--QARTKARYVLDSSNDVVSLLHKLAVAN 787 (797)
T ss_pred HHHHhccccccccccccccccccccccccccccccccCceEEEEEC--CCCccCeecCCCHHHHHHHHHHHhccC
Confidence 9999986421 12778887 578999999999999999999998654
No 7
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=2.1e-40 Score=356.12 Aligned_cols=287 Identities=28% Similarity=0.375 Sum_probs=231.7
Q ss_pred ccccccch--------HHHHhcCCCcccccccc-cCcccCccccchhHhHHHHhCCCCCCc-----------------HH
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKE-SNNEFSSTDTDVAYRTWQRQYPSALTS-----------------FE 108 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~L~~-----------------~~ 108 (385)
++++|||| |..|++|++++++.++. ... .+..++...|+.+|...|.. ++
T Consensus 406 ~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~----~v~~~~~~~w~~~~l~~l~~~~~~~~~~~~~~~~~~~~~ 481 (726)
T PRK14501 406 EALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQE----RLRRYDVHKWASDFLDELREAAEKNKAFASKPITPAAAE 481 (726)
T ss_pred cCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHhCCHHHHHHHHHHHHHHHHhhhhccccccCCccCHH
Confidence 47899999 77899999888776644 332 46678888898875443322 23
Q ss_pred H-HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc-C-CEEEEcCCChhHHHHHhCCcCceEEecCc
Q 016649 109 Q-ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY-F-PTAIISGRSRDKVYEFVGLAELYYAGSHG 185 (385)
Q Consensus 109 ~-~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~-~v~I~SGR~~~~l~~~~~~~~l~~iaenG 185 (385)
. +.+|.++++++|++||||||+++..+|..+.++++++++|++|+++ + .|+|+|||++..+..+++..++++||+||
T Consensus 482 ~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~~l~liaenG 561 (726)
T PRK14501 482 EIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDLPIHLVAEHG 561 (726)
T ss_pred HHHHHHHhccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCCCeEEEEeCC
Confidence 3 4489999999999999999999887787888999999999999996 4 89999999999999999866789999999
Q ss_pred eeEeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhH
Q 016649 186 MDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYW 265 (385)
Q Consensus 186 ~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~ 265 (385)
++++.+++. |.... ... ..|.+.+...+.++.++++|+++|+++++++|||++++++..
T Consensus 562 ~~i~~~~~~-----w~~~~-------------~~~---~~w~~~v~~il~~~~~~~~gs~ie~k~~~l~~~~r~~d~~~~ 620 (726)
T PRK14501 562 AWSRAPGGE-----WQLLE-------------PVA---TEWKDAVRPILEEFVDRTPGSFIEEKEASLAWHYRNADPELG 620 (726)
T ss_pred EEEeCCCCc-----eEECC-------------Ccc---hhHHHHHHHHHHHHHhcCCCcEEEEcceEEEEEccCCCHHHH
Confidence 999976543 32110 001 235677777888888899999999999999999999887654
Q ss_pred HH----HHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHh
Q 016649 266 AT----VVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELRE 341 (385)
Q Consensus 266 ~~----l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~ 341 (385)
.. +.++++..++..+ +.+..|..++||+|+ ++|||.|+++|++ +++. ++++||||+.||++||++++.
T Consensus 621 ~~~a~~l~~~l~~~~~~~~--~~v~~g~~~veV~p~-~vnKG~al~~ll~--~~~~---d~vl~~GD~~nDe~Mf~~~~~ 692 (726)
T PRK14501 621 EARANELILALSSLLSNAP--LEVLRGNKVVEVRPA-GVNKGRAVRRLLE--AGPY---DFVLAIGDDTTDEDMFRALPE 692 (726)
T ss_pred HHHHHHHHHHHHHHhcCCC--eEEEECCeEEEEEEC-CCCHHHHHHHHHh--cCCC---CEEEEECCCCChHHHHHhccc
Confidence 33 4445555555544 888889999999999 9999999999999 4443 499999999999999999853
Q ss_pred CCCceEEEeeCCCCCccceEEeCChhHHHHHHHHHHH
Q 016649 342 GNHGYGILVSSVPKESKAFYSLRDPSEVMEFLKSFVM 378 (385)
Q Consensus 342 ~~~g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~~ 378 (385)
.|++|+||| +++.|+|+|++++||+++|++|++
T Consensus 693 --~~~~v~vG~--~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 693 --TAITVKVGP--GESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred --CceEEEECC--CCCcceEeCCCHHHHHHHHHHHhc
Confidence 379999986 578999999999999999999975
No 8
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=100.00 E-value=1.6e-40 Score=311.54 Aligned_cols=225 Identities=42% Similarity=0.626 Sum_probs=152.0
Q ss_pred EEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhHHHHHhCCcCceEEecCceeEeCCCCCCCCCC
Q 016649 122 FLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF--PTAIISGRSRDKVYEFVGLAELYYAGSHGMDIMGPVRQSIPND 199 (385)
Q Consensus 122 ~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~~~~l~~iaenG~~I~~~~~~~~~~~ 199 (385)
||||||||+++.++|+.+.++++++++|++|++++ .|+|+|||+...+..++++++++++|+||++++.+++. .
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~~~~~~i~l~gehG~e~~~~~~~----~ 76 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERFGGIPNIGLAGEHGAEIRRPGGS----E 76 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH-S-SS-EEEEGGGTEEEETTE-----E
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHhcCCCCceEEEEeeEEeccCccc----c
Confidence 79999999999999999999999999999999996 59999999999988888899999999999999998764 2
Q ss_pred CcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChh----hHHHHHHHHHHH
Q 016649 200 NADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEK----YWATVVQRVHEI 275 (385)
Q Consensus 200 ~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~----~~~~l~~~v~~~ 275 (385)
|... .......|++.+.+.++++.++++|+++|+|++++.||||+++++ ...++.+.+.+.
T Consensus 77 ~~~~---------------~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~ 141 (235)
T PF02358_consen 77 WTNL---------------PADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREI 141 (235)
T ss_dssp EE-T---------------TGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHH
T ss_pred cccc---------------ccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHH
Confidence 2210 122334688999999999999999999999999999999999887 346677888888
Q ss_pred HHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhC-CCceEEEeeCCC
Q 016649 276 LKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREG-NHGYGILVSSVP 354 (385)
Q Consensus 276 l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~-~~g~~V~v~n~~ 354 (385)
+..++ .+++..|++++||+|. +.+||.|+++|++.++.....+++++|+||+.+||+||+++++. ..|++|.|+...
T Consensus 142 ~~~~~-~~~v~~g~~~vEvrp~-~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~~~~~~i~V~~~~ 219 (235)
T PF02358_consen 142 LASHP-GLEVVPGKKVVEVRPP-GVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELEEGGFGIKVGSVS 219 (235)
T ss_dssp HHHH--T-EEEE-SSEEEEE-T-T--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS----EEEEES---
T ss_pred HHhCC-CEEEEECCCEEEEEeC-CCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcccCCCCeEEEeec
Confidence 87775 6999999999999999 99999999999999987644456999999999999999999875 347899998754
Q ss_pred ---CCccceEEeCChh
Q 016649 355 ---KESKAFYSLRDPS 367 (385)
Q Consensus 355 ---~~t~A~y~l~~~~ 367 (385)
+.|.|+|.|++|+
T Consensus 220 ~~~~~t~A~y~l~~p~ 235 (235)
T PF02358_consen 220 VGEKPTAASYRLDDPS 235 (235)
T ss_dssp ----------------
T ss_pred ccccccccccccccCC
Confidence 6799999999874
No 9
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=100.00 E-value=1.6e-38 Score=303.28 Aligned_cols=232 Identities=24% Similarity=0.374 Sum_probs=190.6
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc-C-CEEEEcCCChhHHHHHhCCcCceEEecCceeEeCCCCCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY-F-PTAIISGRSRDKVYEFVGLAELYYAGSHGMDIMGPVRQS 195 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~-~v~I~SGR~~~~l~~~~~~~~l~~iaenG~~I~~~~~~~ 195 (385)
+++||+||||||+++..+|+++.++++++++|++|+++ + .|+|+|||+...+.++++..+++++|+||++++.+++..
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~~ 93 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPYRFPLAGVHGAERRDINGKT 93 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcccceEEEeCCCeeecCCCCe
Confidence 68999999999999988898999999999999999984 4 899999999999999998666789999999998765431
Q ss_pred CCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHHHHHHH-HH
Q 016649 196 IPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWATVVQRV-HE 274 (385)
Q Consensus 196 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~v-~~ 274 (385)
+.. . . . ..+...+.+.+.++.++++|.++|.++.++.+||++++++ .+...++ +.
T Consensus 94 ----~~~-----~--------l--~---~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~~--~~~~~~l~~~ 149 (266)
T PRK10187 94 ----HIV-----H--------L--P---DAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQH--EDALLALAQR 149 (266)
T ss_pred ----eec-----c--------C--C---hhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCcc--HHHHHHHHHH
Confidence 100 0 0 0 1235566777777777899999999999999999987432 2233333 34
Q ss_pred HHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCC
Q 016649 275 ILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVP 354 (385)
Q Consensus 275 ~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~ 354 (385)
+.+.++ .+.+.+|+.++||+|+ ++|||.|+++|++.+|+... .++||||+.||++||+++++. .|+||+|||+
T Consensus 150 i~~~~~-~~~~~~g~~~lEi~p~-g~~Kg~al~~ll~~~~~~~~---~v~~~GD~~nD~~mf~~~~~~-~g~~vavg~a- 222 (266)
T PRK10187 150 ITQIWP-QLALQPGKCVVEIKPR-GTNKGEAIAAFMQEAPFAGR---TPVFVGDDLTDEAGFAVVNRL-GGISVKVGTG- 222 (266)
T ss_pred HHhhCC-ceEEeCCCEEEEeeCC-CCCHHHHHHHHHHhcCCCCC---eEEEEcCCccHHHHHHHHHhc-CCeEEEECCC-
Confidence 444555 5777889999999999 99999999999999998765 899999999999999999754 3799999976
Q ss_pred CCccceEEeCChhHHHHHHHHHHHhhc
Q 016649 355 KESKAFYSLRDPSEVMEFLKSFVMWKQ 381 (385)
Q Consensus 355 ~~t~A~y~l~~~~eV~~~L~~L~~~~~ 381 (385)
.+.|+|+|++|++|..||+.|+...+
T Consensus 223 -~~~A~~~l~~~~~v~~~L~~l~~~~~ 248 (266)
T PRK10187 223 -ATQASWRLAGVPDVWSWLEMITTAQQ 248 (266)
T ss_pred -CCcCeEeCCCHHHHHHHHHHHHHhhh
Confidence 48899999999999999999986543
No 10
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=7.5e-39 Score=301.87 Aligned_cols=244 Identities=27% Similarity=0.411 Sum_probs=207.7
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCC--EEEEcCCChhHHHHHhCCcCceEEecCcee
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFP--TAIISGRSRDKVYEFVGLAELYYAGSHGMD 187 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~--v~I~SGR~~~~l~~~~~~~~l~~iaenG~~ 187 (385)
+..|.+++++++|+||||||+++..+|+...++++++++|++|+.+++ ++|+|||+...+..++++++++++|+||++
T Consensus 10 ~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~v~~i~l~aehGa~ 89 (266)
T COG1877 10 LEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFGVPGIGLIAEHGAE 89 (266)
T ss_pred ccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcCCCCccEEEecceE
Confidence 347899999999999999999999999999999999999999999974 999999999999999999999999999999
Q ss_pred EeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHH
Q 016649 188 IMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWAT 267 (385)
Q Consensus 188 I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~ 267 (385)
++.+++. .|... ....++.|++++.++++++++++||+++|.|++++.||||+++++....
T Consensus 90 ~r~~~g~----~~~~~---------------~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~ 150 (266)
T COG1877 90 VRDPNGK----WWINL---------------AEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAA 150 (266)
T ss_pred EecCCCC----eeEec---------------CHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHH
Confidence 9988776 33322 1234567889999999999999999999999999999999998765433
Q ss_pred HHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceE
Q 016649 268 VVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYG 347 (385)
Q Consensus 268 l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~ 347 (385)
.+........ ....++++.|+.++|++|. ++|||.|+.++++.++... +++++.|||.+||+||++++... +++
T Consensus 151 ~a~~~~~~~~-~~~~~~v~~gk~vVEvrp~-~~~KG~a~~~i~~~~~~~~---~~~~~aGDD~TDE~~F~~v~~~~-~~~ 224 (266)
T COG1877 151 LALAEAATLI-NELKLRVTPGKMVVELRPP-GVSKGAAIKYIMDELPFDG---RFPIFAGDDLTDEDAFAAVNKLD-SIT 224 (266)
T ss_pred HHHHHHHhcc-ccccEEEEeCceEEEEeeC-CcchHHHHHHHHhcCCCCC---CcceecCCCCccHHHHHhhccCC-Cce
Confidence 3322222222 2213889999999999999 9999999999999998765 39999999999999999998664 677
Q ss_pred EEeeCCCCCccceEEeCChhHHHHHHHHHHHhh
Q 016649 348 ILVSSVPKESKAFYSLRDPSEVMEFLKSFVMWK 380 (385)
Q Consensus 348 V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~~~~ 380 (385)
|-++ ...|.|++.+.++..+..+|.++....
T Consensus 225 v~v~--~~~t~a~~~~~~~~~~~~~l~~~~~~~ 255 (266)
T COG1877 225 VKVG--VGSTQAKFRLAGVYGFLRSLYKLLEAL 255 (266)
T ss_pred EEec--CCcccccccccccHHHHHHHHHHHHHh
Confidence 7775 558999999999999999998887554
No 11
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=100.00 E-value=1.2e-37 Score=293.56 Aligned_cols=236 Identities=31% Similarity=0.382 Sum_probs=184.7
Q ss_pred CCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhHHHHHhCCcCceEEecCceeEeCCCC
Q 016649 116 GKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF--PTAIISGRSRDKVYEFVGLAELYYAGSHGMDIMGPVR 193 (385)
Q Consensus 116 ~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~~~~l~~iaenG~~I~~~~~ 193 (385)
+|+++|||||||||+++.++|+.+.++++++++|++|++++ .|+|+|||+...+..++.+++++++|+||++++.++.
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~~~~~~~l~g~hG~~~~~~g~ 80 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGVKLPGLGLAGEHGCEMKDNGS 80 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccCCCCceeEEeecCEEEecCCC
Confidence 57899999999999999988999999999999999999985 5789999999999888888889999999999987332
Q ss_pred CCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccC-ChhhHHHHHH-H
Q 016649 194 QSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNV-DEKYWATVVQ-R 271 (385)
Q Consensus 194 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~-d~~~~~~l~~-~ 271 (385)
. ..|... ......|.+.+.....++.+ .||+++|+|+++++||||.+ +++.....+. .
T Consensus 81 ~---~~~~~~----------------~~~~~~~~~~~~~l~~~~~~-~pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~ 140 (244)
T TIGR00685 81 C---QDWVNL----------------TEKIPSWKVRANELREEITT-RPGVFIERKGVALAWHYRQAPVPELARFRAKEL 140 (244)
T ss_pred c---ceeeec----------------hhhhhhHHHHHHHHHHHHhc-CCCcEEEecceEEEEEeccCCCcHHHHHHHHHH
Confidence 2 122110 00001122233333333333 49999999999999999998 4443332222 2
Q ss_pred HHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCC---CceEE
Q 016649 272 VHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGN---HGYGI 348 (385)
Q Consensus 272 v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~---~g~~V 348 (385)
+....... .+.+..|+.++|++|. ++|||.|++++++.+++... ++++|||+.||++||++++... .+++|
T Consensus 141 ~~~~~~~~--~~~v~~g~~~~e~~p~-~~~Kg~a~~~~~~~~~~~~~---~~i~iGD~~~D~~~~~~~~~~~~~~g~~~v 214 (244)
T TIGR00685 141 KEKILSFT--DLEVMDGKAVVELKPR-FVNKGEIVKRLLWHQPGSGI---SPVYLGDDITDEDAFRVVNNQWGNYGFYPV 214 (244)
T ss_pred HHHHhcCC--CEEEEECCeEEEEeeC-CCCHHHHHHHHHHhcccCCC---ceEEEcCCCcHHHHHHHHhcccCCCCeEEE
Confidence 33333333 4888999999999999 99999999999999998654 8999999999999999995432 36899
Q ss_pred EeeCCCCCccceEEeCChhHHHHHHHHHH
Q 016649 349 LVSSVPKESKAFYSLRDPSEVMEFLKSFV 377 (385)
Q Consensus 349 ~v~n~~~~t~A~y~l~~~~eV~~~L~~L~ 377 (385)
.|+.+..++.|+|+++++++|..+|+.|+
T Consensus 215 ~v~~g~~~~~A~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 215 PIGSGSKKTVAKFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred EEecCCcCCCceEeCCCHHHHHHHHHHHh
Confidence 99766778999999999999999999886
No 12
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3e-33 Score=294.56 Aligned_cols=277 Identities=25% Similarity=0.339 Sum_probs=227.8
Q ss_pred cccccch--------HHHHhcCCCcccccccccCcccCccccchhHhHHHHhCCCCCCc-----------------HHHH
Q 016649 56 DVRACSW--------LDAMKSSSPPPKWMAKESNNEFSSTDTDVAYRTWQRQYPSALTS-----------------FEQI 110 (385)
Q Consensus 56 ~~~~n~w--------~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~L~~-----------------~~~~ 110 (385)
+++|||| |..|++||.++++.++..+. .++..|+...|..++.+-|.. -..+
T Consensus 419 aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~---~~v~~~~~~~W~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~i 495 (732)
T KOG1050|consen 419 AIVVNPWDGDEFAILISKALTMSDEERELREPKHY---KYVSTHDVVYWAKSFLQGLKRIWKVGFLGFRVTPLLTAEHIV 495 (732)
T ss_pred CEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhh---hhhcchhHHHHHHHHHHhhhhhhhhcccccccccccChhHhh
Confidence 6899999 78899999999999977543 367899999998886663311 1235
Q ss_pred HHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhHHHHHh-CCcCceEEecCcee
Q 016649 111 LKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF--PTAIISGRSRDKVYEFV-GLAELYYAGSHGMD 187 (385)
Q Consensus 111 ~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~-~~~~l~~iaenG~~ 187 (385)
..|.++++++|++|||||+.+.. | ..+...|+.|+.++ .|+|+|||.+..+...+ +.++++++||||++
T Consensus 496 ~~y~~s~~rli~ldyd~t~~~~~--~------~~~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f 567 (732)
T KOG1050|consen 496 SDYKKSKKRLILLDYDLTLIPPR--S------IKAISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYF 567 (732)
T ss_pred hhhhhccceEEEecccccccCCC--C------chHHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCce
Confidence 58999999999999998888832 1 22999999999995 79999999999997766 57899999999999
Q ss_pred EeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHH
Q 016649 188 IMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWAT 267 (385)
Q Consensus 188 I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~ 267 (385)
++.+++ |.++. .+ ++|.+.+.+++++|++++||+++|.++..+.|||+++++++...
T Consensus 568 ~r~~~~------w~~~~--~~---------------~~w~~~v~~i~~~~~ert~GS~ie~k~~~l~~hy~~ad~~~g~~ 624 (732)
T KOG1050|consen 568 VRIPGK------WETCV--LD---------------LDWKDLVKDIFQYYTERTPGSYIERKETALVWHYRNADPEFGEL 624 (732)
T ss_pred eccCCc------eeeec--cc---------------ccHHHHHHHHHHHHHhcCCCceecccCceEEEeeeccCcchhHH
Confidence 998874 55443 22 24788888999999999999999999999999999998886554
Q ss_pred HHHHHHHHH--HhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCC--
Q 016649 268 VVQRVHEIL--KQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGN-- 343 (385)
Q Consensus 268 l~~~v~~~l--~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~-- 343 (385)
++.++.+.+ .+. .+++..|+..+||+|. |++||.|++.++..+. .++++++|+||+++||+||.++....
T Consensus 625 qA~el~~~l~~~~~--~~~v~~g~~~Vev~~~-gvsk~~~~~~~~~~~~---~~~df~~c~g~d~tDed~~~~~~~~~~~ 698 (732)
T KOG1050|consen 625 QAKELLEHLESKNE--PVEVVRGKHIVEVRPQ-GVSKGLAAERILSEMV---KEPDFVLCIGDDRTDEDMFEFISKAKDP 698 (732)
T ss_pred HHHHHHHHhcccCC--CeEEEecCceEEEccc-ccchHHHHHHHHHhcC---CCcceEEEecCCCChHHHHHHHhhccCC
Confidence 444443333 344 4999999999999999 9999999999999988 34579999999999999999987643
Q ss_pred ----CceEEEeeCCCCCccceEEeCChhHHHHHHH
Q 016649 344 ----HGYGILVSSVPKESKAFYSLRDPSEVMEFLK 374 (385)
Q Consensus 344 ----~g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~ 374 (385)
.-|.+++| .+.|.|+|.+.++.||.+.|+
T Consensus 699 ~~~~~~F~~~~g--~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 699 EKVEEIFACTVG--QKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred cccceEEEEEcC--CCCcccccccCChHHHHhhcc
Confidence 23666665 588999999999999999875
No 13
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.96 E-value=7.2e-29 Score=235.93 Aligned_cols=225 Identities=20% Similarity=0.232 Sum_probs=148.5
Q ss_pred CCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCC
Q 016649 117 KRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVR 193 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~ 193 (385)
..++|++|+||||+.. +..++++++++|+++++.+ +|+|+|||+...+..++. + ...++|++||+.|+.+ +
T Consensus 2 ~~kli~~DlDGTLl~~-----~~~i~~~~~~al~~~~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~-~ 75 (264)
T COG0561 2 MIKLLAFDLDGTLLDS-----NKTISPETKEALARLREKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNG-G 75 (264)
T ss_pred CeeEEEEcCCCCccCC-----CCccCHHHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecC-C
Confidence 4689999999999994 5569999999999999986 999999999999999885 2 2238999999999998 3
Q ss_pred CCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccce-----------------eEEEE
Q 016649 194 QSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKF-----------------CVSVH 256 (385)
Q Consensus 194 ~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~-----------------~l~~~ 256 (385)
+.+ +...+ . ...+.++...+.... ............ ...+.
T Consensus 76 ~~i---~~~~l---------------~---~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 133 (264)
T COG0561 76 ELL---FQKPL---------------S---REDVEELLELLEDFQ-GIALVLYTDDGIYLTKKRGTFAEARIGFANLSPV 133 (264)
T ss_pred cEE---eeecC---------------C---HHHHHHHHHHHHhcc-CceEEEEeccceeeccCCCccccccccccccccc
Confidence 311 10000 0 012233333332110 000011010000 00000
Q ss_pred eccCCh-h--------hHHHHHHHHHHHH-HhCC-CcEEEEecC-eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEE
Q 016649 257 YRNVDE-K--------YWATVVQRVHEIL-KQYP-TRLRLTHGR-KVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPI 324 (385)
Q Consensus 257 yr~~d~-~--------~~~~l~~~v~~~l-~~~~-~~l~v~~g~-~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi 324 (385)
....+. . ........+...+ +.++ ..+.++++. .++||.|+ |+|||.|+++|++.+|++.+ ++|
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~-g~~K~~al~~l~~~lgi~~~---~v~ 209 (264)
T COG0561 134 GREAAELEDNKIIALDKDHEILEELVEALRKRFPDLGLTVSSSGPISLDITPK-GVSKGYALQRLAKLLGIKLE---EVI 209 (264)
T ss_pred ccchhhcCcceEEEEecChHhHHHHHHHHhhhccccceEEEEcCCceEEEecC-CCchHHHHHHHHHHhCCCHH---HeE
Confidence 000000 0 0011222333223 3333 235555554 45999999 99999999999999999864 899
Q ss_pred EEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC--ChhHHHHHHHHHHH
Q 016649 325 YVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLR--DPSEVMEFLKSFVM 378 (385)
Q Consensus 325 ~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~--~~~eV~~~L~~L~~ 378 (385)
+|||+.||++||+++ |+||+|+|+.++ ..|+|++. +.+||+++|+++..
T Consensus 210 afGD~~ND~~Ml~~a-----g~gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 210 AFGDSTNDIEMLEVA-----GLGVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred EeCCccccHHHHHhc-----CeeeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 999999999999998 899999999654 67888764 67899999998863
No 14
>PRK10976 putative hydrolase; Provisional
Probab=99.96 E-value=1.1e-28 Score=234.89 Aligned_cols=241 Identities=17% Similarity=0.139 Sum_probs=147.9
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVRQ 194 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~~ 194 (385)
.++||+|+||||++. +..++++++++|++|++.+ +|+|+|||++..+..++. + ...++|++||+.|++..+.
T Consensus 2 ikli~~DlDGTLl~~-----~~~is~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 2 YQVVASDLDGTLLSP-----DHTLSPYAKETLKLLTARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred ceEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 379999999999983 4579999999999999997 999999999999988775 3 2357899999999975443
Q ss_pred CCCCCCcc---cccccCc--C-CC-ccccccccccccc-hHHHHHHHHHHhhhhccC---cEEeccc-eeEEEEeccCCh
Q 016649 195 SIPNDNAD---TIQSTGK--Q-GK-EVNLFQPAREFLP-MIDAVFHSLMENTKEING---VKVENNK-FCVSVHYRNVDE 262 (385)
Q Consensus 195 ~~~~~~~~---~~~~~d~--~-~~-~~~l~~~~~~~~~-~i~~v~~~l~~~~~~~~g---~~iE~~~-~~l~~~yr~~d~ 262 (385)
.+...... ..+..+. . .. .+.++....-+.. ........+......... ..++... ..+.+.. .+.
T Consensus 77 ~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~--~~~ 154 (266)
T PRK10976 77 LIFSHNLDRDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFTC--DSH 154 (266)
T ss_pred EehhhcCCHHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEEc--CCH
Confidence 22111000 0000000 0 00 0011111110100 000101111000000000 0001111 1111111 122
Q ss_pred hhHHHHHHHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHh
Q 016649 263 KYWATVVQRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELRE 341 (385)
Q Consensus 263 ~~~~~l~~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~ 341 (385)
+....+.+.+. +.++..+.+ .++..++||.|+ |+|||.|+++|++++|++.+ ++++|||+.||++||+++
T Consensus 155 ~~~~~~~~~l~---~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~lgi~~~---~viafGD~~NDi~Ml~~a-- 225 (266)
T PRK10976 155 EKLLPLEQAIN---ARWGDRVNVSFSTLTCLEVMAG-GVSKGHALEAVAKKLGYSLK---DCIAFGDGMNDAEMLSMA-- 225 (266)
T ss_pred HHHHHHHHHHH---HHhCCcEEEEEeCCceEEEEcC-CCChHHHHHHHHHHcCCCHH---HeEEEcCCcccHHHHHHc--
Confidence 22222222222 223224665 456679999999 99999999999999999875 899999999999999999
Q ss_pred CCCceEEEeeCCCCC--ccce--EEeC--ChhHHHHHHHHHH
Q 016649 342 GNHGYGILVSSVPKE--SKAF--YSLR--DPSEVMEFLKSFV 377 (385)
Q Consensus 342 ~~~g~~V~v~n~~~~--t~A~--y~l~--~~~eV~~~L~~L~ 377 (385)
|+||+|+||.++ ..|+ +++. +.+||+++|+++.
T Consensus 226 ---g~~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 226 ---GKGCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred ---CCCeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 899999999875 5665 6664 6789999999885
No 15
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.96 E-value=2.6e-28 Score=232.63 Aligned_cols=239 Identities=15% Similarity=0.168 Sum_probs=147.4
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC---Cc--CceEEecCceeEeCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG---LA--ELYYAGSHGMDIMGP 191 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---~~--~l~~iaenG~~I~~~ 191 (385)
.++||+|+||||++. +..++++++++|++|++.+ .|+|+|||++..+..++. +. ..++|++||+.|+++
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 3 IKLIAIDMDGTLLLP-----DHTISPAVKQAIAAARAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred eEEEEEecCCcCcCC-----CCccCHHHHHHHHHHHHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 589999999999983 4679999999999999996 999999999999988764 32 247999999999864
Q ss_pred C-CCCCCCCCcc---c---ccccCcCCCccccccccccccc--hHHHHHHHHHHhhhhccCcE-----Eec-cce-eEEE
Q 016649 192 V-RQSIPNDNAD---T---IQSTGKQGKEVNLFQPAREFLP--MIDAVFHSLMENTKEINGVK-----VEN-NKF-CVSV 255 (385)
Q Consensus 192 ~-~~~~~~~~~~---~---~~~~d~~~~~~~l~~~~~~~~~--~i~~v~~~l~~~~~~~~g~~-----iE~-~~~-~l~~ 255 (385)
. +..+...... . .+.....+....++....-+.. ...... ....+....+... +.. ..+ .+.+
T Consensus 78 ~~~~~i~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~ 156 (270)
T PRK10513 78 ADGETVAQTALSYDDYLYLEKLSREVGVHFHALDRNTLYTANRDISYYT-VHESFLTGIPLVFREVEKMDPNLQFPKVMM 156 (270)
T ss_pred CCCCEEEecCCCHHHHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhH-HHhhhhccCCccccchhhccccCCceEEEE
Confidence 3 3321111000 0 0000000000000000000000 000000 0000000000000 000 000 0111
Q ss_pred EeccCChhhHHHHHHHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHH
Q 016649 256 HYRNVDEKYWATVVQRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDED 334 (385)
Q Consensus 256 ~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~ 334 (385)
+ .+++....+.+.+. +.+...+.+ .++..++||.|+ |+|||+|+++|++++|++.+ ++++|||+.||++
T Consensus 157 -~--~~~~~~~~~~~~~~---~~~~~~~~~~~s~~~~~eI~~~-gvsKg~al~~l~~~~gi~~~---~v~afGD~~NDi~ 226 (270)
T PRK10513 157 -I--DEPEILDAAIARIP---AEVKERYTVLKSAPYFLEILDK-RVNKGTGVKSLAEHLGIKPE---EVMAIGDQENDIA 226 (270)
T ss_pred -e--CCHHHHHHHHHHhH---HHhcCcEEEEEecCeeEEEeCC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHH
Confidence 1 11222222222222 222224665 456689999999 99999999999999999875 8999999999999
Q ss_pred HHHHHHhCCCceEEEeeCCCCC--ccceEEeC--ChhHHHHHHHHHH
Q 016649 335 AFKELREGNHGYGILVSSVPKE--SKAFYSLR--DPSEVMEFLKSFV 377 (385)
Q Consensus 335 mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~--~~~eV~~~L~~L~ 377 (385)
||+++ |+||+|+||.++ ..|+|++. +.+||.++|+++.
T Consensus 227 Ml~~a-----g~~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 227 MIEYA-----GVGVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HHHhC-----CceEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99998 899999999875 78999985 5789999999875
No 16
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.96 E-value=1.5e-28 Score=234.89 Aligned_cols=241 Identities=16% Similarity=0.196 Sum_probs=147.9
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVRQ 194 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~~ 194 (385)
.++||+|+||||++. +..++++++++|++|++.+ .|+|+|||++..+..++. + ...++|++||+.|++..+.
T Consensus 2 ~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 2 ARLAAFDMDGTLLMP-----DHHLGEKTLSTLARLRERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred ccEEEEeCCCcCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 379999999999983 4579999999999999997 899999999999998874 2 2347899999999975443
Q ss_pred CCCCCCc---ccccccCc--C-CCccccccccccccc-hHHHHHHHHHHhhhhccC---cEEeccc-eeEEEEeccCChh
Q 016649 195 SIPNDNA---DTIQSTGK--Q-GKEVNLFQPAREFLP-MIDAVFHSLMENTKEING---VKVENNK-FCVSVHYRNVDEK 263 (385)
Q Consensus 195 ~~~~~~~---~~~~~~d~--~-~~~~~l~~~~~~~~~-~i~~v~~~l~~~~~~~~g---~~iE~~~-~~l~~~yr~~d~~ 263 (385)
.+..... ...+..+. + +..+.++....-+.. ....+............. ..+.... ..+.+. .+++
T Consensus 77 ~l~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~---~~~~ 153 (272)
T PRK15126 77 LLHRQDLPADVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFC---GDHD 153 (272)
T ss_pred EEEeecCCHHHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEE---CCHH
Confidence 2211100 00000000 0 000111111100100 001111100000000000 0000001 111111 1222
Q ss_pred hHHHHHHHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhC
Q 016649 264 YWATVVQRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREG 342 (385)
Q Consensus 264 ~~~~l~~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~ 342 (385)
....+.+.+.+. ++..+.+ .++..++||.|+ |+|||+|+++|++++|++.+ ++++|||+.||++||+++
T Consensus 154 ~~~~~~~~l~~~---~~~~~~~~~s~~~~~eI~~~-g~sKg~al~~l~~~~gi~~~---~v~afGD~~NDi~Ml~~a--- 223 (272)
T PRK15126 154 DLTRLQIQLNEA---LGERAHLCFSATDCLEVLPV-GCNKGAALAVLSQHLGLSLA---DCMAFGDAMNDREMLGSV--- 223 (272)
T ss_pred HHHHHHHHHHHH---hcCCEEEEEcCCcEEEeecC-CCChHHHHHHHHHHhCCCHH---HeEEecCCHHHHHHHHHc---
Confidence 222233333222 2224555 345679999999 99999999999999999875 899999999999999999
Q ss_pred CCceEEEeeCCCCC--ccceE--EeC--ChhHHHHHHHHHHH
Q 016649 343 NHGYGILVSSVPKE--SKAFY--SLR--DPSEVMEFLKSFVM 378 (385)
Q Consensus 343 ~~g~~V~v~n~~~~--t~A~y--~l~--~~~eV~~~L~~L~~ 378 (385)
|+||+|+|+.++ ..|+| ++. +.+||+++|++++.
T Consensus 224 --g~~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 224 --GRGFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred --CCceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 899999999875 56665 553 67899999999873
No 17
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.96 E-value=6.8e-28 Score=230.51 Aligned_cols=224 Identities=17% Similarity=0.247 Sum_probs=147.1
Q ss_pred CCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC---CcCceEEecCceeEeCCC
Q 016649 117 KRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG---LAELYYAGSHGMDIMGPV 192 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---~~~l~~iaenG~~I~~~~ 192 (385)
.+++||+|+||||++. +..++++++++|++|.+.+ +|+|+|||+...+..++. +.+.++|++||+.|+.+.
T Consensus 6 ~~~lI~~DlDGTLL~~-----~~~i~~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~ 80 (271)
T PRK03669 6 DPLLIFTDLDGTLLDS-----HTYDWQPAAPWLTRLREAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDE 80 (271)
T ss_pred CCeEEEEeCccCCcCC-----CCcCcHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecC
Confidence 5789999999999982 4568899999999999996 999999999999988874 333579999999999764
Q ss_pred CCCCCC---CCcccccccCcCCCccccccccccccchHHHHHHHHHHhh---------------hhccCc-----EEe-c
Q 016649 193 RQSIPN---DNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENT---------------KEINGV-----KVE-N 248 (385)
Q Consensus 193 ~~~~~~---~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~---------------~~~~g~-----~iE-~ 248 (385)
+..... .+...+.. ..+.++.+.+.... ....+. .++ .
T Consensus 81 ~~~~~~~~~~~~~~l~~------------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 142 (271)
T PRK03669 81 QWQDHPDFPRIISGISH------------------GEIRQVLNTLREKEGFKFTTFDDVDDATIAEWTGLSRSQAALARL 142 (271)
T ss_pred cccCCCCceEeecCCCH------------------HHHHHHHHHHHHhcCCceeecccCCHHHHHHHhCCCHHHHHHHhc
Confidence 321000 00000000 00111111110000 000000 000 0
Q ss_pred cceeEEEEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCC---CCCCCceEEE
Q 016649 249 NKFCVSVHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGL---NNCEDVLPIY 325 (385)
Q Consensus 249 ~~~~l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~---~~~~~~~vi~ 325 (385)
...+..+.+.. +++. ...+.+.+... .+.++.+..++||.|+ |+|||+|+++|++++|+ +.+ ++++
T Consensus 143 ~~~~~~~~~~~-~~~~----~~~~~~~l~~~--~~~~~~~~~~iEi~~~-g~sKg~al~~l~~~lgi~~~~~~---~via 211 (271)
T PRK03669 143 HEASVTLIWRD-SDER----MAQFTARLAEL--GLQFVQGARFWHVLDA-SAGKDQAANWLIATYQQLSGTRP---TTLG 211 (271)
T ss_pred cccCceeEecC-CHHH----HHHHHHHHHHC--CCEEEecCeeEEEecC-CCCHHHHHHHHHHHHHhhcCCCc---eEEE
Confidence 00111122211 1111 22233333332 3666556678999999 99999999999999999 664 8999
Q ss_pred EeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--------ccceEEeC--ChhHHHHHHHHHHHh
Q 016649 326 VGDDRTDEDAFKELREGNHGYGILVSSVPKE--------SKAFYSLR--DPSEVMEFLKSFVMW 379 (385)
Q Consensus 326 ~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--------t~A~y~l~--~~~eV~~~L~~L~~~ 379 (385)
|||+.||++||+++ |+||+|+|+..+ ..|.|+++ +++|+.+.|++++..
T Consensus 212 fGDs~NDi~Ml~~a-----g~gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 212 LGDGPNDAPLLDVM-----DYAVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred EcCCHHHHHHHHhC-----CEEEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 99999999999999 899999976531 26889886 678999999998753
No 18
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.96 E-value=3.1e-28 Score=226.49 Aligned_cols=217 Identities=17% Similarity=0.186 Sum_probs=146.9
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVRQ 194 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~~ 194 (385)
.++||+|+||||++. +..++++++++|++|++.+ +|+|+|||+...+..++. + .+.++|++||+.|+.+...
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 3 IKAIAIDIDGTITDK-----DRRLSLKAVEAIRKAEKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred eeEEEEecCCCcCCC-----CCccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 479999999999983 4569999999999999986 999999999999887764 2 2347999999999876322
Q ss_pred CCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEE-eccce--eEEEEeccCChhhHHHHHHH
Q 016649 195 SIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKV-ENNKF--CVSVHYRNVDEKYWATVVQR 271 (385)
Q Consensus 195 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~i-E~~~~--~l~~~yr~~d~~~~~~l~~~ 271 (385)
.. .+.. +. +...++...+..........+. ..... .....++... .+.
T Consensus 78 ~~--~~~~----------------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 128 (230)
T PRK01158 78 KR--IFLG----------------DI----EECEKAYSELKKRFPEASTSLTKLDPDYRKTEVALRRTVP-------VEE 128 (230)
T ss_pred CE--EEEc----------------ch----HHHHHHHHHHHHhccccceeeecCCcccccceeeeccccc-------HHH
Confidence 10 0000 00 0112222222111000000000 00000 0001111111 123
Q ss_pred HHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee
Q 016649 272 VHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS 351 (385)
Q Consensus 272 v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~ 351 (385)
+.+.++++...+.+..+..++||.|+ ++|||.|++++++++|++.+ ++++|||+.||++||+++ |++|+|+
T Consensus 129 ~~~~l~~~~~~~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~ 199 (230)
T PRK01158 129 VRELLEELGLDLEIVDSGFAIHIKSP-GVNKGTGLKKLAELMGIDPE---EVAAIGDSENDLEMFEVA-----GFGVAVA 199 (230)
T ss_pred HHHHHHHcCCcEEEEecceEEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEECCchhhHHHHHhc-----CceEEec
Confidence 34444444324666666678999999 99999999999999999864 899999999999999998 8999999
Q ss_pred CCCCC--ccceEEeC--ChhHHHHHHHHHH
Q 016649 352 SVPKE--SKAFYSLR--DPSEVMEFLKSFV 377 (385)
Q Consensus 352 n~~~~--t~A~y~l~--~~~eV~~~L~~L~ 377 (385)
|+.++ ..|+|++. +.+||+++|+++.
T Consensus 200 Na~~~vk~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 200 NADEELKEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred CccHHHHHhcceEecCCCcChHHHHHHHHh
Confidence 99864 68999985 6789999999874
No 19
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.95 E-value=4.6e-28 Score=221.55 Aligned_cols=200 Identities=23% Similarity=0.299 Sum_probs=143.6
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCCcCceEEecCceeEeCCCCCCCCC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGLAELYYAGSHGMDIMGPVRQSIPN 198 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~~~l~~iaenG~~I~~~~~~~~~~ 198 (385)
+|++||||||++. +...++++++++|++|++++ .++|+|||+...+..+++..+.++|++||+.|+.+++.
T Consensus 1 li~~D~DgTL~~~----~~~~~~~~~~~~l~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~i~~nGa~i~~~~~~---- 72 (204)
T TIGR01484 1 LLFFDLDGTLLDP----NAHELSPETIEALERLREAGVKVVLVTGRSLAEIKELLKQLPLPLIAENGALIFYPGEI---- 72 (204)
T ss_pred CEEEeCcCCCcCC----CCCcCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHhCCCCEEECCCcEEEECCEE----
Confidence 5899999999983 22578999999999999996 89999999999999998744578999999999976543
Q ss_pred CCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccC--ChhhHHHHHHHHHHHH
Q 016649 199 DNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNV--DEKYWATVVQRVHEIL 276 (385)
Q Consensus 199 ~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~--d~~~~~~l~~~v~~~l 276 (385)
.|.. +. + ...+++.+.+++...+..+....++..+|.+.+++.++|+.. .+.....+...++...
T Consensus 73 ~~~~-----~~---~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (204)
T TIGR01484 73 LYIE-----PS---D-----VFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAELGQELDSKMRERLEKIG 139 (204)
T ss_pred EEEc-----cc---c-----cHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccchhhHHHHHHHHHHHhhc
Confidence 1110 00 0 000011111222222222234566777888889999999864 1111223333333322
Q ss_pred HhCCCcEEEE-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEe
Q 016649 277 KQYPTRLRLT-HGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILV 350 (385)
Q Consensus 277 ~~~~~~l~v~-~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v 350 (385)
.+.+ .+++. ++..++||.|+ +++||.|+++++++++++.. ++++|||+.||++||+++ |++|+|
T Consensus 140 ~~~~-~~~~~~s~~~~~ev~p~-~~~K~~~~~~~~~~~~~~~~---~~~~~GD~~nD~~~~~~~-----~~~vam 204 (204)
T TIGR01484 140 RNDL-ELEAIYVGKTDLEVLPA-GVDKGSALQALLKELNGKRD---EILAFGDSGNDEEMFEVA-----GLAVAV 204 (204)
T ss_pred cccC-cEEEEEecCCEEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCHHHHHHHHHc-----CCceEC
Confidence 1123 57876 68899999999 99999999999999998764 899999999999999998 788886
No 20
>PLN02887 hydrolase family protein
Probab=99.95 E-value=3.4e-27 Score=245.35 Aligned_cols=248 Identities=19% Similarity=0.182 Sum_probs=150.2
Q ss_pred HHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC---Cc-C-------ce
Q 016649 112 KSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG---LA-E-------LY 179 (385)
Q Consensus 112 ~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---~~-~-------l~ 179 (385)
++-+.+.++||+|+||||++ ++..++++++++|++|++++ .|+|||||++..+..++. +. . .+
T Consensus 302 ~~~~~~iKLIa~DLDGTLLn-----~d~~Is~~t~eAI~kl~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~~p 376 (580)
T PLN02887 302 RFYKPKFSYIFCDMDGTLLN-----SKSQISETNAKALKEALSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISESSP 376 (580)
T ss_pred hhhccCccEEEEeCCCCCCC-----CCCccCHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeeccc
Confidence 34455688999999999998 35679999999999999997 999999999999988764 22 1 24
Q ss_pred EEecCceeEeCCCCCCCCCCCcc---cccccCc---CCCccccccccccccchHHHHHHHHHHhhhhccCcEE-------
Q 016649 180 YAGSHGMDIMGPVRQSIPNDNAD---TIQSTGK---QGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKV------- 246 (385)
Q Consensus 180 ~iaenG~~I~~~~~~~~~~~~~~---~~~~~d~---~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~i------- 246 (385)
+|+.||+.|++..+..+...... ..+..+. .+....++.....|..........+...........+
T Consensus 377 ~I~~NGA~I~d~~g~~I~~~~L~~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~i~~l~~~~ 456 (580)
T PLN02887 377 GVFLQGLLVYGRQGREIYRSNLDQEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEIMSSVDQLL 456 (580)
T ss_pred EEeecCeEEEECCCcEEEEEeCCHHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccccCCHHHhh
Confidence 66789999986544322110000 0000000 0000011111111100000000001000000000000
Q ss_pred eccceeEEEEeccCChhhHHHHHHHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEE
Q 016649 247 ENNKFCVSVHYRNVDEKYWATVVQRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIY 325 (385)
Q Consensus 247 E~~~~~l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~ 325 (385)
....+. .+-+...++.....+.+.+.+ .+...+.+ .++..++||.|+ |+|||.||++|++++|++.+ ++++
T Consensus 457 ~~~~i~-Ki~~~~~~e~~~~~l~~~l~~---~~~~~~~v~~S~~~~lEI~p~-gvSKG~ALk~L~e~lGI~~e---eviA 528 (580)
T PLN02887 457 AAADIQ-KVIFLDTAEGVSSVLRPYWSE---ATGDRANVVQAQPDMLEIVPP-GTSKGNGVKMLLNHLGVSPD---EIMA 528 (580)
T ss_pred cccCee-EEEEEcChHHHHHHHHHHHHH---HhcCcEEEEEecCcEEEEecC-CCCHHHHHHHHHHHcCCCHH---HEEE
Confidence 000111 111111111111122222222 22224665 456679999999 99999999999999999875 8999
Q ss_pred EeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC--ChhHHHHHHHHHH
Q 016649 326 VGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLR--DPSEVMEFLKSFV 377 (385)
Q Consensus 326 ~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~--~~~eV~~~L~~L~ 377 (385)
|||+.||++||+++ |+||+|+||.++ ..|+|++. +.+||.++|++++
T Consensus 529 FGDs~NDIeMLe~A-----G~gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 529 IGDGENDIEMLQLA-----SLGVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EecchhhHHHHHHC-----CCEEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 99999999999999 899999999875 68999984 6789999999874
No 21
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.95 E-value=1e-26 Score=219.61 Aligned_cols=229 Identities=21% Similarity=0.216 Sum_probs=157.4
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHh---CC-cCceEEecCceeEeCCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFV---GL-AELYYAGSHGMDIMGPV 192 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~---~~-~~l~~iaenG~~I~~~~ 192 (385)
|.+|++|+||||+++.+ .+..++++++++++++.+++ .|+++|||++..+..+. ++ .+.++|++||+.|+.++
T Consensus 1 ~~li~tDlDGTLl~~~~--~~~~~~~~~~~~i~~~~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~ 78 (249)
T TIGR01485 1 RLLLVSDLDNTLVDHTD--GDNQALLRLNALLEDHRGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGG 78 (249)
T ss_pred CeEEEEcCCCcCcCCCC--CChHHHHHHHHHHHHhhccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCC
Confidence 57899999999998432 23668899999999999997 99999999999999885 43 23468999999999754
Q ss_pred CCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHHHHHHH
Q 016649 193 RQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWATVVQRV 272 (385)
Q Consensus 193 ~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~v 272 (385)
.......|...+ ...|. .+.+......+....+....+.+.+.+.+.+. .+....+.+.+
T Consensus 79 ~~~~~~~~~~~~---------------~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~---~~~~~~~~~~l 138 (249)
T TIGR01485 79 AEVPDQHWAEYL---------------SEKWQ--RDIVVAITDKFEELKPQPDLEQRPHKVSFFLD---PEAAPEVIKQL 138 (249)
T ss_pred CCcCCHHHHHHH---------------hcccC--HHHHHHHHhcCcccccCCccccCCeeEEEEec---hhhhhHHHHHH
Confidence 221111111000 01111 12233333222222233333445556665543 22223345666
Q ss_pred HHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee
Q 016649 273 HEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS 351 (385)
Q Consensus 273 ~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~ 351 (385)
.+.+..++..+.+ .++..++||.|+ +++||.|+++|++.+|++.+ .+++|||+.||++||+.+ .+++|+|+
T Consensus 139 ~~~l~~~~~~~~~~~~~~~~ldi~~~-~~~K~~al~~l~~~~~i~~~---~~i~~GD~~ND~~ml~~~----~~~~va~~ 210 (249)
T TIGR01485 139 TEMLKETGLDVKLIYSSGKDLDILPQ-GSGKGQALQYLLQKLAMEPS---QTLVCGDSGNDIELFEIG----SVRGVIVS 210 (249)
T ss_pred HHHHHhcCCCEEEEEECCceEEEEeC-CCChHHHHHHHHHHcCCCcc---CEEEEECChhHHHHHHcc----CCcEEEEC
Confidence 6667665434554 567789999999 99999999999999999865 899999999999999985 26899999
Q ss_pred CCCCCc--c-------ceEEeC--ChhHHHHHHHHH
Q 016649 352 SVPKES--K-------AFYSLR--DPSEVMEFLKSF 376 (385)
Q Consensus 352 n~~~~t--~-------A~y~l~--~~~eV~~~L~~L 376 (385)
|+.++- . ..|+.+ +++|+++.|+++
T Consensus 211 na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 211 NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 987542 1 226665 679999999875
No 22
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.95 E-value=3.2e-26 Score=212.99 Aligned_cols=229 Identities=20% Similarity=0.249 Sum_probs=142.5
Q ss_pred EEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCCCCCC
Q 016649 121 LFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVRQSIP 197 (385)
Q Consensus 121 i~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~~~~~ 197 (385)
||+|+||||++. ...++++++++|++|++.+ .++|+|||++..+..+++ + ...++|++||+.+..+.++.+
T Consensus 1 i~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l- 74 (254)
T PF08282_consen 1 IFSDLDGTLLNS-----DGKISPETIEALKELQEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKIL- 74 (254)
T ss_dssp EEEECCTTTCST-----TSSSCHHHHHHHHHHHHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEE-
T ss_pred cEEEECCceecC-----CCeeCHHHHHHHHhhcccceEEEEEccCcccccccccccccchhhhcccccceeeecccccc-
Confidence 689999999993 4569999999999999986 899999999999999986 2 236999999999944443311
Q ss_pred CCCcccccccCc---------CCCccccccccccccc-h-HHHHHHHHHHhhhhccCcEE-----e-ccceeEEEEeccC
Q 016649 198 NDNADTIQSTGK---------QGKEVNLFQPAREFLP-M-IDAVFHSLMENTKEINGVKV-----E-NNKFCVSVHYRNV 260 (385)
Q Consensus 198 ~~~~~~~~~~d~---------~~~~~~l~~~~~~~~~-~-i~~v~~~l~~~~~~~~g~~i-----E-~~~~~l~~~yr~~ 260 (385)
+...+..... ......++.+..-+.. . ........... ........ . ..-..+.++.
T Consensus 75 --~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~ki~~~~--- 148 (254)
T PF08282_consen 75 --YEKPIDSDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKF-FNFKESIVSEDDLEDEEIFKILFFP--- 148 (254)
T ss_dssp --EEESB-HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHH-TSCEEEESHHHHHHCSSESEEEEES---
T ss_pred --hhhheeccchhheeehhhhcccccccccceeeecccccccchhhhhhcc-cccccccccccccccccceeeeccc---
Confidence 1110000000 0000011110000000 0 00000000000 00000000 0 0001222211
Q ss_pred ChhhHHHHHHHHHHHHHhCCCcEE-EEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 261 DEKYWATVVQRVHEILKQYPTRLR-LTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 261 d~~~~~~l~~~v~~~l~~~~~~l~-v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+.+....+.+++.+.+.. .+. +..+..++||.|. ++|||.|+++|++.+|++.+ .+++|||+.||++||+.+
T Consensus 149 ~~~~~~~l~~~l~~~~~~---~~~~~~~~~~~lei~~~-~vsK~~ai~~l~~~~~i~~~---~~~~~GD~~ND~~Ml~~~ 221 (254)
T PF08282_consen 149 DPEDLEQLREELKKKFPN---LIDVVRSSPYFLEITPK-GVSKGSAIKYLLEYLGISPE---DIIAFGDSENDIEMLELA 221 (254)
T ss_dssp CHHHHHHHHHHHHHHHTT---TEEEEEEETTEEEEEET-TSSHHHHHHHHHHHHTTSGG---GEEEEESSGGGHHHHHHS
T ss_pred cchhhhhhhhhhccccCc---ceeEEEecccceEEeeC-CCCHHHHHHHHhhhcccccc---eeEEeecccccHhHHhhc
Confidence 223333444444443332 234 3567899999999 99999999999999999875 899999999999999999
Q ss_pred HhCCCceEEEeeCCCCC--ccceEEeC--ChhHHHHHH
Q 016649 340 REGNHGYGILVSSVPKE--SKAFYSLR--DPSEVMEFL 373 (385)
Q Consensus 340 ~~~~~g~~V~v~n~~~~--t~A~y~l~--~~~eV~~~L 373 (385)
|+||+|+|+.++ ..|+|++. +.++|+++|
T Consensus 222 -----~~~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 222 -----GYSVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp -----SEEEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred -----CeEEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 899999999875 68999985 347888875
No 23
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.94 E-value=6.8e-26 Score=215.74 Aligned_cols=240 Identities=14% Similarity=0.136 Sum_probs=144.8
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCC-C
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPV-R 193 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~-~ 193 (385)
.++||+|+||||++. +..++++++++|+++++.+ .|+|||||++..+..++. + ...++|++||+.|++.. +
T Consensus 3 ~kli~~DlDGTLl~~-----~~~i~~~~~~ai~~~~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 3 YRVIALDLDGTLLTP-----KKTILPESLEALARAREAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred ccEEEEeCCCceECC-----CCccCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 579999999999983 4579999999999999996 999999999999988774 3 23479999999999753 3
Q ss_pred CCCCCCCcc---cccccCc---CCCccccccccccccc-hHHHHHHHHHHhhhhccC----cE--Ee-------ccceeE
Q 016649 194 QSIPNDNAD---TIQSTGK---QGKEVNLFQPAREFLP-MIDAVFHSLMENTKEING----VK--VE-------NNKFCV 253 (385)
Q Consensus 194 ~~~~~~~~~---~~~~~d~---~~~~~~l~~~~~~~~~-~i~~v~~~l~~~~~~~~g----~~--iE-------~~~~~l 253 (385)
..+...+.. ..+..+. ......++....-+.. ....+.... .+....+. .. +. .....+
T Consensus 78 ~~l~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (272)
T PRK10530 78 KVLEADPLPVQQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTL-NWAQTLPPEQRPTFTQVDSLAQAARQVNAIW 156 (272)
T ss_pred EEEEecCCCHHHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHh-hhhhccchhcccceEEcccHHHHHhhcCCcE
Confidence 211111100 0000000 0000000000000000 000010000 00000000 00 00 000001
Q ss_pred EEEeccCChhhHHHHHHHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCC
Q 016649 254 SVHYRNVDEKYWATVVQRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTD 332 (385)
Q Consensus 254 ~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nD 332 (385)
.+.....+.+ .+.+..+.+.+.+. +.+ .++..++||.|. +++||.|++++++.+|++.+ ++++|||+.||
T Consensus 157 ~i~~~~~~~~---~~~~~~~~~~~~~~--~~~~~s~~~~~ei~~~-~~~K~~~l~~l~~~~gi~~~---e~i~~GD~~ND 227 (272)
T PRK10530 157 KFALTHEDLP---QLQHFAKHVEHELG--LECEWSWHDQVDIARK-GNSKGKRLTQWVEAQGWSMK---NVVAFGDNFND 227 (272)
T ss_pred EEEEecCCHH---HHHHHHHHHhhhcC--ceEEEecCceEEEecC-CCChHHHHHHHHHHcCCCHH---HeEEeCCChhh
Confidence 1111111111 11122223333333 443 344568999999 99999999999999999875 89999999999
Q ss_pred HHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC--ChhHHHHHHHHHH
Q 016649 333 EDAFKELREGNHGYGILVSSVPKE--SKAFYSLR--DPSEVMEFLKSFV 377 (385)
Q Consensus 333 e~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~--~~~eV~~~L~~L~ 377 (385)
++||+.+ |+||+|+|+.++ ..|+|++. +.+||.++|+++.
T Consensus 228 i~m~~~a-----g~~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 228 ISMLEAA-----GLGVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HHHHHhc-----CceEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 9999999 899999998754 57999885 5788999999874
No 24
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.94 E-value=3.3e-26 Score=211.99 Aligned_cols=213 Identities=19% Similarity=0.215 Sum_probs=140.6
Q ss_pred EEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-Cc-CceEEecCceeEeCCCCCCCC
Q 016649 121 LFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-LA-ELYYAGSHGMDIMGPVRQSIP 197 (385)
Q Consensus 121 i~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~~-~l~~iaenG~~I~~~~~~~~~ 197 (385)
|++|+||||++. ...++++++++|++|++.+ +++|+|||++..+..++. +. ..++|++||+.|+...+...
T Consensus 1 i~~DlDGTLl~~-----~~~i~~~~~~al~~l~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~- 74 (225)
T TIGR01482 1 IASDIDGTLTDP-----NRAINESALEAIRKAESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDD- 74 (225)
T ss_pred CeEeccCccCCC-----CcccCHHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCce-
Confidence 589999999983 4579999999999999996 999999999999888764 32 46899999999987653210
Q ss_pred CCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHHHHHHHHHHHH
Q 016649 198 NDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWATVVQRVHEILK 277 (385)
Q Consensus 198 ~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~v~~~l~ 277 (385)
.|...+ ... +......................... ..+.+ ..+.+ .+...++
T Consensus 75 -~~~~~~---------------~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~-------~~~~~~~ 126 (225)
T TIGR01482 75 -IFLAYL---------------EEE---WFLDIVIAKTFPFSRLKVQYPRRASL-VKMRY-GIDVD-------TVREIIK 126 (225)
T ss_pred -EEeccc---------------CHH---HHHHHHHhcccchhhhccccccccce-EEEee-cCCHH-------HHHHHHH
Confidence 111000 000 01000000000000000000000001 11111 11221 2233344
Q ss_pred hCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC-
Q 016649 278 QYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE- 356 (385)
Q Consensus 278 ~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~- 356 (385)
.+...+.+.++..++||.|+ +++||+|++++++++|++.+ ++++|||+.||++||+++ |++|+|+|+.++
T Consensus 127 ~~~~~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~~GD~~NDi~m~~~a-----g~~vam~Na~~~~ 197 (225)
T TIGR01482 127 ELGLNLVAVDSGFDIHILPQ-GVNKGVAVKKLKEKLGIKPG---ETLVCGDSENDIDLFEVP-----GFGVAVANAQPEL 197 (225)
T ss_pred hcCceEEEecCCcEEEEeeC-CCCHHHHHHHHHHHhCCCHH---HEEEECCCHhhHHHHHhc-----CceEEcCChhHHH
Confidence 44312443455679999999 99999999999999999865 899999999999999998 899999998765
Q ss_pred -ccceEEeC--ChhH----HHHHHHHH
Q 016649 357 -SKAFYSLR--DPSE----VMEFLKSF 376 (385)
Q Consensus 357 -t~A~y~l~--~~~e----V~~~L~~L 376 (385)
..|+|++. +.++ |.++|+++
T Consensus 198 k~~A~~vt~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 198 KEWADYVTESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred HHhcCeecCCCCCCcHHHHHHHHHHhh
Confidence 68999985 5677 88888875
No 25
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.94 E-value=7.4e-26 Score=211.98 Aligned_cols=218 Identities=18% Similarity=0.209 Sum_probs=146.6
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC---Cc-CceEEecCceeEeCCCCC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG---LA-ELYYAGSHGMDIMGPVRQ 194 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---~~-~l~~iaenG~~I~~~~~~ 194 (385)
||++|+||||++ ++..+++.. ++++ +.+.+ .++|+|||++..+..+++ +. +.++|++||+.|+.+...
T Consensus 1 li~~DlDgTLl~-----~~~~~~~~~-~~~~-~~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~ 73 (236)
T TIGR02471 1 LIITDLDNTLLG-----DDEGLASFV-ELLR-GSGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL 73 (236)
T ss_pred CeEEeccccccC-----CHHHHHHHH-HHHH-hcCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC
Confidence 589999999998 245577666 7776 56665 899999999999999975 32 346999999999765422
Q ss_pred CCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccce--eEEEEeccCChhhHHHHHHHH
Q 016649 195 SIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKF--CVSVHYRNVDEKYWATVVQRV 272 (385)
Q Consensus 195 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~--~l~~~yr~~d~~~~~~l~~~v 272 (385)
.....|.. . ....|. ..++. ......++..++.... ...++|+..++.. ...+++
T Consensus 74 ~~~~~~~~--------------~-~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~ 130 (236)
T TIGR02471 74 QPDRFWQK--------------H-IDHDWR--RQAVV----EALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQI 130 (236)
T ss_pred CCChhHHH--------------H-HhcCCC--HHHHH----HHHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHH
Confidence 10001100 0 000110 12222 2233456655554431 3455665433211 112334
Q ss_pred HHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee
Q 016649 273 HEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS 351 (385)
Q Consensus 273 ~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~ 351 (385)
...+++....+.+ ..+..++||.|+ ++|||.|+++|++++|++.+ .+++|||+.||++||+.+ |+||+|+
T Consensus 131 ~~~l~~~~~~~~~~~~~~~~~ei~~~-~~~K~~al~~l~~~~g~~~~---~~i~~GD~~nD~~ml~~~-----~~~iav~ 201 (236)
T TIGR02471 131 RQRLRQQSQAAKVILSCGWFLDVLPL-RASKGLALRYLSYRWGLPLE---QILVAGDSGNDEEMLRGL-----TLGVVVG 201 (236)
T ss_pred HHHHHhccCCEEEEEECCceEEEeeC-CCChHHHHHHHHHHhCCCHH---HEEEEcCCccHHHHHcCC-----CcEEEEc
Confidence 4444444323544 455678999999 99999999999999998764 899999999999999987 8999999
Q ss_pred CCCCC--ccce----EEeC--ChhHHHHHHHHH
Q 016649 352 SVPKE--SKAF----YSLR--DPSEVMEFLKSF 376 (385)
Q Consensus 352 n~~~~--t~A~----y~l~--~~~eV~~~L~~L 376 (385)
|+.++ ..|+ |+++ +.+||.++|+++
T Consensus 202 na~~~~k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 202 NHDPELEGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred CCcHHHHHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 98765 4677 7774 567999999875
No 26
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.94 E-value=7.7e-26 Score=208.85 Aligned_cols=207 Identities=21% Similarity=0.247 Sum_probs=140.0
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-Cc-CceEEecCceeEeCCCCCC
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-LA-ELYYAGSHGMDIMGPVRQS 195 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~~-~l~~iaenG~~I~~~~~~~ 195 (385)
++||+|+||||++ ++..++++++++|++|++.+ +|+|+|||++..+..++. +. ..++|++||+.|+...+.
T Consensus 2 k~v~~DlDGTLl~-----~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~- 75 (215)
T TIGR01487 2 KLVAIDIDGTLTE-----PNRMISERAIEAIRKAEKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKED- 75 (215)
T ss_pred cEEEEecCCCcCC-----CCcccCHHHHHHHHHHHHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCc-
Confidence 6899999999998 35679999999999999996 999999999999988775 32 347999999999986532
Q ss_pred CCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHHHHHHHHHH
Q 016649 196 IPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWATVVQRVHEI 275 (385)
Q Consensus 196 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~v~~~ 275 (385)
+ .+.. ....+. ...... . .+....... ...+....+.. ..+. .+.+...
T Consensus 76 ~--~~~~----------------~~~~~~--~~~~~~-~-~~~~~~~~~--~~~~~~~~~~~---~~~~----~~~~~~~ 124 (215)
T TIGR01487 76 I--FLAN----------------MEEEWF--LDEEKK-K-RFPRDRLSN--EYPRASLVIMR---EGKD----VDEVREI 124 (215)
T ss_pred E--EEec----------------ccchhh--HHHhhh-h-hhhhhhccc--ccceeEEEEec---CCcc----HHHHHHH
Confidence 1 0000 000000 000000 0 000000000 00011111111 1111 1223334
Q ss_pred HHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC
Q 016649 276 LKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK 355 (385)
Q Consensus 276 l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~ 355 (385)
++.. ++.+..+...+||.|. +++||+|++++++.+|++.+ .+++|||+.||++||+.+ |+||+|+|+.+
T Consensus 125 l~~~--~~~~~~~~~~~ei~~~-~~~K~~~i~~l~~~~~i~~~---~~i~iGDs~ND~~ml~~a-----g~~vam~na~~ 193 (215)
T TIGR01487 125 IKER--GLNLVDSGFAIHIMKK-GVDKGVGVEKLKELLGIKPE---EVAAIGDSENDIDLFRVV-----GFKVAVANADD 193 (215)
T ss_pred HHhC--CeEEEecCceEEEecC-CCChHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHhC-----CCeEEcCCccH
Confidence 4443 3666555678999999 99999999999999999864 899999999999999999 89999999876
Q ss_pred C--ccceEEeC--ChhHHHHHH
Q 016649 356 E--SKAFYSLR--DPSEVMEFL 373 (385)
Q Consensus 356 ~--t~A~y~l~--~~~eV~~~L 373 (385)
+ ..|+|++. +.+||.++|
T Consensus 194 ~~k~~A~~v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 194 QLKEIADYVTSNPYGEGVVEVL 215 (215)
T ss_pred HHHHhCCEEcCCCCCchhhhhC
Confidence 5 68999985 567787764
No 27
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.93 E-value=6.5e-25 Score=208.10 Aligned_cols=219 Identities=21% Similarity=0.252 Sum_probs=140.3
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-Cc-CceEEecCceeEeCCCCCCC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-LA-ELYYAGSHGMDIMGPVRQSI 196 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~~-~l~~iaenG~~I~~~~~~~~ 196 (385)
+||+|+||||+.. ...+.+.++++|++|++.+ +++|+|||++..+..++. +. ..++|++||+.|+..++...
T Consensus 1 li~~DlDGTll~~-----~~~~~~~~~~~i~~l~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~ 75 (256)
T TIGR01486 1 WIFTDLDGTLLDP-----HGYDWGPAKEVLERLQELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFT 75 (256)
T ss_pred CEEEcCCCCCcCC-----CCcCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCccc
Confidence 5899999999983 2323446999999999986 999999999999988875 32 35899999999998654321
Q ss_pred CC-CCcccccccCcCCCccccccccccccchHHHHHHHHHHhhh---------------hccCcE------EeccceeEE
Q 016649 197 PN-DNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTK---------------EINGVK------VENNKFCVS 254 (385)
Q Consensus 197 ~~-~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~---------------~~~g~~------iE~~~~~l~ 254 (385)
.. .|. . ....++ ..+.++.+.+.+... ...+.. .....+...
T Consensus 76 ~~~~~~--~-~~~i~~-------------~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (256)
T TIGR01486 76 EPEYPV--I-ALGIPY-------------EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSET 139 (256)
T ss_pred CCCeEE--E-EcCCCH-------------HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCCc
Confidence 00 000 0 000000 011111111100000 000000 000011111
Q ss_pred EEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCC--CCCCceEEEEeCCCCC
Q 016649 255 VHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLN--NCEDVLPIYVGDDRTD 332 (385)
Q Consensus 255 ~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~--~~~~~~vi~~GD~~nD 332 (385)
+.+ +. +..+.+.+.+++.. +.+..+..++||.|. +++||+|+++|++.+|++ .+ .+++|||+.||
T Consensus 140 ~~~---~~----~~~~~~~~~~~~~~--~~~~~s~~~~ei~~~-~~~Kg~ai~~l~~~~~i~~~~~---~~~a~GD~~ND 206 (256)
T TIGR01486 140 ILW---SE----ERRERFTEALVELG--LEVTHGNRFYHVLGA-GSDKGKAANALKQFYNQPGGAI---KVVGLGDSPND 206 (256)
T ss_pred eec---Ch----HHHHHHHHHHHHcC--CEEEeCCceEEEecC-CCCHHHHHHHHHHHHhhcCCCc---eEEEEcCCHhh
Confidence 111 11 12333444444443 666555579999999 999999999999999988 54 89999999999
Q ss_pred HHHHHHHHhCCCceEEEeeCCCC---C--cc--c-eEEeC--ChhHHHHHHHHHH
Q 016649 333 EDAFKELREGNHGYGILVSSVPK---E--SK--A-FYSLR--DPSEVMEFLKSFV 377 (385)
Q Consensus 333 e~mfk~~~~~~~g~~V~v~n~~~---~--t~--A-~y~l~--~~~eV~~~L~~L~ 377 (385)
++||+.+ |+||+|+|+.+ + .. | .|++. +.+||++.|++++
T Consensus 207 ~~Ml~~a-----g~~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~~ 256 (256)
T TIGR01486 207 LPLLEVV-----DLAVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHLL 256 (256)
T ss_pred HHHHHHC-----CEEEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHhC
Confidence 9999998 89999999973 2 33 3 48774 6789999999873
No 28
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.93 E-value=4.2e-25 Score=209.14 Aligned_cols=235 Identities=17% Similarity=0.258 Sum_probs=141.2
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCCCCC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVRQSI 196 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~~~~ 196 (385)
+||+|+||||++. ...++++++++|++|++.+ .++|+|||+...+..++. + ...++|++||+.|+...+..+
T Consensus 1 li~~DlDGTLl~~-----~~~i~~~~~~~i~~l~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i 75 (256)
T TIGR00099 1 LIFIDLDGTLLND-----DHTISPSTKEALAKLREKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEIL 75 (256)
T ss_pred CEEEeCCCCCCCC-----CCccCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEE
Confidence 5899999999983 4579999999999999996 999999999999988875 3 234899999999998744321
Q ss_pred CCCCcc------cccccCcCCCccccccccccccch-HHHHHHHHHHhhhhccCcEEe------ccceeEEEEeccCChh
Q 016649 197 PNDNAD------TIQSTGKQGKEVNLFQPAREFLPM-IDAVFHSLMENTKEINGVKVE------NNKFCVSVHYRNVDEK 263 (385)
Q Consensus 197 ~~~~~~------~~~~~d~~~~~~~l~~~~~~~~~~-i~~v~~~l~~~~~~~~g~~iE------~~~~~l~~~yr~~d~~ 263 (385)
...... .+......+..+.++....-+... ............. .+...+. ...+.....+ .+++
T Consensus 76 ~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 152 (256)
T TIGR00099 76 YKKPLDLDLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLG-EPKLEVVDIQYLPDDILKILLLF--LDPE 152 (256)
T ss_pred eecCCCHHHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhcc-CCcceeccchhhhcccceEEEEE--CCHH
Confidence 111000 000000000000001000000000 0000000000000 0000000 0111111111 1222
Q ss_pred hHHHHHHHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhC
Q 016649 264 YWATVVQRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREG 342 (385)
Q Consensus 264 ~~~~l~~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~ 342 (385)
....+.+.+.. ..+...+.+ .++..++||.|+ ++|||.|++++++.+|++.+ ++++|||+.||++||+.+
T Consensus 153 ~~~~~~~~~~~--~~~~~~~~~~~s~~~~leI~~~-~~~K~~~i~~~~~~~~~~~~---~~~~~GD~~nD~~m~~~~--- 223 (256)
T TIGR00099 153 DLDLLIEALNK--LELEENVSVVSSGPYSIEITAK-GVSKGSALQSLAEALGISLE---DVIAFGDGMNDIEMLEAA--- 223 (256)
T ss_pred HHHHHHHHhhh--hhhcCCEEEEEecCceEEecCC-CCChHHHHHHHHHHcCCCHH---HEEEeCCcHHhHHHHHhC---
Confidence 22222222221 112224665 466789999999 99999999999999999864 899999999999999998
Q ss_pred CCceEEEeeCCCCC--ccceEEeC--ChhHHHHHH
Q 016649 343 NHGYGILVSSVPKE--SKAFYSLR--DPSEVMEFL 373 (385)
Q Consensus 343 ~~g~~V~v~n~~~~--t~A~y~l~--~~~eV~~~L 373 (385)
|++|+|+|+.+. ..|+|++. +.+||.++|
T Consensus 224 --~~~~a~~na~~~~k~~a~~~~~~n~~dGV~~~l 256 (256)
T TIGR00099 224 --GYGVAMGNADEELKALADYVTDSNNEDGVALAL 256 (256)
T ss_pred --CceeEecCchHHHHHhCCEEecCCCCcchhhhC
Confidence 799999998764 57999885 567787764
No 29
>PLN02382 probable sucrose-phosphatase
Probab=99.92 E-value=6.2e-24 Score=214.26 Aligned_cols=233 Identities=18% Similarity=0.163 Sum_probs=151.7
Q ss_pred HhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHH-HHHHhcC-CEEEEcCCChhHHHHHh---CC-cCceEEecCce
Q 016649 113 SAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVV-KNVAKYF-PTAIISGRSRDKVYEFV---GL-AELYYAGSHGM 186 (385)
Q Consensus 113 ~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL-~~L~~~~-~v~I~SGR~~~~l~~~~---~~-~~l~~iaenG~ 186 (385)
...+.+.+|++|+||||++.. +...++.....+| +++.+++ .++++|||++..+..+. ++ .+.++|++||+
T Consensus 4 ~~~~~~~lI~sDLDGTLL~~~---~~~~~s~~~~~~l~~~~~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt 80 (413)
T PLN02382 4 LSGSPRLMIVSDLDHTMVDHH---DPENLSLLRFNALWEAEYRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGT 80 (413)
T ss_pred ccCCCCEEEEEcCCCcCcCCC---CccchhHHHHHHHHHHhhcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCc
Confidence 345678999999999999842 1336775555555 8888776 89999999988777765 32 34578999999
Q ss_pred eEeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHH
Q 016649 187 DIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWA 266 (385)
Q Consensus 187 ~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~ 266 (385)
.|+..+.......|...+ ...|. ...+.+.+..+.........+.+.+.+.+.+. ++...
T Consensus 81 ~I~~~~~~~~d~~w~~~l---------------~~~w~--~~~v~~~~~~~~~l~~q~~~~~~~~Ki~~~~~---~~~~~ 140 (413)
T PLN02382 81 EIAYGESMVPDHGWVEYL---------------NKKWD--REIVVEETSKFPELKLQPETEQRPHKVSFYVD---KKKAQ 140 (413)
T ss_pred EEEeCCCCccChhHHHHH---------------hccCC--hhhHHHHHhcCCCcccCCcccCCCeEEEEEec---hHHhH
Confidence 998654321111121110 01111 11122222221111122233444456666543 22223
Q ss_pred HHHHHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHc---CCCCCCCceEEEEeCCCCCHHHHHHHHhC
Q 016649 267 TVVQRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESL---GLNNCEDVLPIYVGDDRTDEDAFKELREG 342 (385)
Q Consensus 267 ~l~~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~l---g~~~~~~~~vi~~GD~~nDe~mfk~~~~~ 342 (385)
.+.+.+.+.+.+....+.+ .++..++||.|+ ++|||.|+++|++++ |++.+ .+++|||+.||++||+.+
T Consensus 141 ~~~~~l~~~~~~~g~~~~i~~s~~~~ldI~p~-g~sKg~Al~~L~~~~~~~gi~~~---~~iafGDs~NDleMl~~a--- 213 (413)
T PLN02382 141 EVIKELSERLEKRGLDVKIIYSGGIDLDVLPQ-GAGKGQALAYLLKKLKAEGKAPV---NTLVCGDSGNDAELFSVP--- 213 (413)
T ss_pred HHHHHHHHHHHhcCCcEEEEEECCcEEEEEeC-CCCHHHHHHHHHHHhhhcCCChh---cEEEEeCCHHHHHHHhcC---
Confidence 3445555555543323554 567789999999 999999999999999 88765 899999999999999998
Q ss_pred CCc-eEEEeeCCCCCc----------cceEEeC---ChhHHHHHHHHHH
Q 016649 343 NHG-YGILVSSVPKES----------KAFYSLR---DPSEVMEFLKSFV 377 (385)
Q Consensus 343 ~~g-~~V~v~n~~~~t----------~A~y~l~---~~~eV~~~L~~L~ 377 (385)
| +||+|+|+.++- .|++++. +.+|+.+.|+++.
T Consensus 214 --g~~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~ 260 (413)
T PLN02382 214 --DVYGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFN 260 (413)
T ss_pred --CCCEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhC
Confidence 7 899999987541 2355542 5789999998875
No 30
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.91 E-value=2.9e-23 Score=198.80 Aligned_cols=232 Identities=18% Similarity=0.241 Sum_probs=143.9
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVRQ 194 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~~ 194 (385)
.++||+|+||||++. ...++++++++|++|.+.+ +++|+|||+...+..++. + ...++|++||+.|+.+.+.
T Consensus 4 ~kli~~DlDGTLl~~-----~~~~~~~~~~ai~~l~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~~ 78 (273)
T PRK00192 4 KLLVFTDLDGTLLDH-----HTYSYEPAKPALKALKEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKNY 78 (273)
T ss_pred ceEEEEcCcccCcCC-----CCcCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEecccc
Confidence 579999999999983 3467889999999999986 999999999999988875 2 1347999999999875432
Q ss_pred CCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhh------------------hccCcEEe---ccceeE
Q 016649 195 SIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTK------------------EINGVKVE---NNKFCV 253 (385)
Q Consensus 195 ~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~------------------~~~g~~iE---~~~~~l 253 (385)
.. ..... . ...+.+. +++..-. ...+.++...+..... ..+...++ ...+..
T Consensus 79 ~~--~~~~~--~-~~~~~~~-~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T PRK00192 79 FP--FQPDG--E-RLKGDYW-VIELGPP-YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSE 151 (273)
T ss_pred cc--cCCcc--c-cccCCce-EEEcCCC-HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCC
Confidence 00 00000 0 0000000 0000000 0011122211111000 00000000 000000
Q ss_pred EEEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCC-CCCceEEEEeCCCCC
Q 016649 254 SVHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNN-CEDVLPIYVGDDRTD 332 (385)
Q Consensus 254 ~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~-~~~~~vi~~GD~~nD 332 (385)
.+.+.. + ....+.+...++..+ +.+..+..++||.|. + +||+|++++++.+|++. + .+++|||+.||
T Consensus 152 ~~~~~~-~----~~~~~~~~~~l~~~~--~~~~~~~~~~ei~~~-~-~Kg~al~~l~~~~~i~~~~---~v~~~GDs~ND 219 (273)
T PRK00192 152 PFLWNG-S----EAAKERFEEALKRLG--LKVTRGGRFLHLLGG-G-DKGKAVRWLKELYRRQDGV---ETIALGDSPND 219 (273)
T ss_pred ceeecC-c----hHHHHHHHHHHHHcC--CEEEECCeEEEEeCC-C-CHHHHHHHHHHHHhccCCc---eEEEEcCChhh
Confidence 000000 1 112333444454443 666666789999999 9 99999999999999987 6 89999999999
Q ss_pred HHHHHHHHhCCCceEEEeeCCCCC------ccc-eEEe--C--ChhHHHHHHHHHHH
Q 016649 333 EDAFKELREGNHGYGILVSSVPKE------SKA-FYSL--R--DPSEVMEFLKSFVM 378 (385)
Q Consensus 333 e~mfk~~~~~~~g~~V~v~n~~~~------t~A-~y~l--~--~~~eV~~~L~~L~~ 378 (385)
++||+.+ |++|+|+||.++ ..| +++. . +.+||++.|+++..
T Consensus 220 i~m~~~a-----g~~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 220 LPMLEAA-----DIAVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred HHHHHhC-----CeeEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 9999998 899999999864 233 4655 3 57899999998753
No 31
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.91 E-value=1e-22 Score=188.64 Aligned_cols=195 Identities=18% Similarity=0.235 Sum_probs=122.3
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC---CcCceEEecCceeEeCCCCCC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG---LAELYYAGSHGMDIMGPVRQS 195 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---~~~l~~iaenG~~I~~~~~~~ 195 (385)
+||+|+||||++. +..+++.++++|++|.+.+ +|+|+|||+...+..++. +...++||+||+.|+.+....
T Consensus 1 ~i~~DlDGTLL~~-----~~~~~~~~~~~l~~l~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~ 75 (221)
T TIGR02463 1 WVFSDLDGTLLDS-----HSYDWQPAAPWLTRLQEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWR 75 (221)
T ss_pred CEEEeCCCCCcCC-----CCCCcHHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCcccc
Confidence 5899999999983 3345566999999999986 999999999999988875 332589999999999764321
Q ss_pred CCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhh---------------hhccCc------EEeccceeEE
Q 016649 196 IPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENT---------------KEINGV------KVENNKFCVS 254 (385)
Q Consensus 196 ~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~---------------~~~~g~------~iE~~~~~l~ 254 (385)
....|... .....+ ..+.++.+.+.... ....+. ..+.+.....
T Consensus 76 ~~~~~~~~--~~~~~~-------------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (221)
T TIGR02463 76 EEPGYPRI--ILGISY-------------GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVP 140 (221)
T ss_pred cCCCceEE--ecCCCH-------------HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcc
Confidence 10000000 000000 01111111110000 000000 0000011111
Q ss_pred EEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHH
Q 016649 255 VHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDED 334 (385)
Q Consensus 255 ~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~ 334 (385)
+... .++ ...+.+.+.+++.+ +.++.+..++||.|. +++||.|++++++++|++.+ ++++|||+.||++
T Consensus 141 ~~~~-~~~----~~~~~~~~~l~~~~--~~~~~~~~~~ei~~~-~~~Kg~al~~l~~~lgi~~~---~vi~~GD~~NDi~ 209 (221)
T TIGR02463 141 LLWR-DSD----SRMPRFTALLADLG--LAIVQGNRFSHVLGA-SSSKGKAANWLKATYNQPDV---KTLGLGDGPNDLP 209 (221)
T ss_pred EEec-Cch----hHHHHHHHHHHHcC--CeEEecCCeeEEecC-CCCHHHHHHHHHHHhCCCCC---cEEEECCCHHHHH
Confidence 1110 111 12233444455443 666666789999999 99999999999999999875 8999999999999
Q ss_pred HHHHHHhCCCceEEEe
Q 016649 335 AFKELREGNHGYGILV 350 (385)
Q Consensus 335 mfk~~~~~~~g~~V~v 350 (385)
||+++ |+||+|
T Consensus 210 ml~~a-----g~~va~ 220 (221)
T TIGR02463 210 LLEVA-----DYAVVI 220 (221)
T ss_pred HHHhC-----CceEEe
Confidence 99998 899987
No 32
>PTZ00174 phosphomannomutase; Provisional
Probab=99.90 E-value=1.2e-22 Score=191.98 Aligned_cols=203 Identities=17% Similarity=0.256 Sum_probs=121.5
Q ss_pred CCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCCc---C-ceEEecCceeEeC
Q 016649 116 GKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGLA---E-LYYAGSHGMDIMG 190 (385)
Q Consensus 116 ~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~~---~-l~~iaenG~~I~~ 190 (385)
.+.++|++|+||||++ ++..++++++++|+++++.+ .|+|||||++..+...++.. . .++|++||+.|+.
T Consensus 3 ~~~klia~DlDGTLL~-----~~~~is~~~~~ai~~l~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~ 77 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK-----PRNPITQEMKDTLAKLKSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYK 77 (247)
T ss_pred CCCeEEEEECcCCCcC-----CCCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEE
Confidence 4679999999999998 45679999999999999996 89999999999999988732 2 3689999999996
Q ss_pred CCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHh-----hhhccCcEEeccceeEEEEec--cCCh-
Q 016649 191 PVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMEN-----TKEINGVKVENNKFCVSVHYR--NVDE- 262 (385)
Q Consensus 191 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~-----~~~~~g~~iE~~~~~l~~~yr--~~d~- 262 (385)
.+ ..+ +...+.. .+ +. ..+.++.+.+... .....+.+++.......+.+. ....
T Consensus 78 ~~-~~i---~~~~i~~-~l---------~~----~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (247)
T PTZ00174 78 DG-ELF---HSQSILK-FL---------GE----EKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQE 139 (247)
T ss_pred CC-eEE---EEEcchh-cC---------CH----HHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHH
Confidence 33 211 1110000 00 00 1223333332221 001112222211101111110 0000
Q ss_pred ---hhH-----HHHHHHHHHHH-HhCCCcE--EEEe-cCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC--
Q 016649 263 ---KYW-----ATVVQRVHEIL-KQYPTRL--RLTH-GRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGD-- 328 (385)
Q Consensus 263 ---~~~-----~~l~~~v~~~l-~~~~~~l--~v~~-g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD-- 328 (385)
... ....+.+.+.+ +.++ .+ .... +..++||.|+ |+|||+||++|++.+ +++++|||
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~s~~~~~~leI~~~-gvsKg~al~~L~~~~-------~eviafGD~~ 210 (247)
T PTZ00174 140 ERDEFEKYDKEHHIREKFIQDLKKEFS-DLGLKFSIGGQISFDVFPK-GWDKTYCLRHLENDF-------KEIHFFGDKT 210 (247)
T ss_pred HHHHHHhcCCcchHHHHHHHHHHHhcC-CCCeEEEecCceEEEeeeC-CCcHHHHHHHHHhhh-------hhEEEEcccC
Confidence 000 01112222222 3333 33 3333 3579999999 999999999999992 28999999
Q ss_pred --CCCCHHHHHHHHhCCCceEEEeeCCC
Q 016649 329 --DRTDEDAFKELREGNHGYGILVSSVP 354 (385)
Q Consensus 329 --~~nDe~mfk~~~~~~~g~~V~v~n~~ 354 (385)
+.||++||++++. .|++ |+|++
T Consensus 211 ~~~~NDieMl~~~~~--~g~~--v~n~~ 234 (247)
T PTZ00174 211 FEGGNDYEIYNDPRT--IGHS--VKNPE 234 (247)
T ss_pred CCCCCcHhhhhcCCC--ceEE--eCCHH
Confidence 9999999998632 2454 44543
No 33
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.89 E-value=5.5e-23 Score=194.24 Aligned_cols=225 Identities=20% Similarity=0.208 Sum_probs=137.8
Q ss_pred CCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc-CCEEEEcCCChhHHHHHhC---C-cCceEEecCceeEeCC
Q 016649 117 KRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY-FPTAIISGRSRDKVYEFVG---L-AELYYAGSHGMDIMGP 191 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~~v~I~SGR~~~~l~~~~~---~-~~l~~iaenG~~I~~~ 191 (385)
.++||++|+||||++. +.....++.+.++...+. ..++++|||+...+.+.+. + .+.++|+++|+.|+..
T Consensus 1 ~~~ll~sDlD~Tl~~~-----~~~~~~~l~~~l~~~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~ 75 (247)
T PF05116_consen 1 PPRLLASDLDGTLIDG-----DDEALARLEELLEQQARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYG 75 (247)
T ss_dssp -SEEEEEETBTTTBHC-----HHHHHHHHHHHHHHHHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEES
T ss_pred CCEEEEEECCCCCcCC-----CHHHHHHHHHHHHHhhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEc
Confidence 3789999999999921 112234445555512222 3799999999999999874 3 3578999999999983
Q ss_pred CCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHHHHHH
Q 016649 192 VRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWATVVQR 271 (385)
Q Consensus 192 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~ 271 (385)
.....+..|...+ ...|. .+.+.+.+..+..-.+....+.+.+.+++.++.... ..+.+.
T Consensus 76 ~~~~~d~~w~~~i---------------~~~w~--~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~---~~~~~~ 135 (247)
T PF05116_consen 76 ENWQPDEEWQAHI---------------DERWD--RERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS---ADILEE 135 (247)
T ss_dssp STTEE-HHHHHHH---------------HTT----HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH---CHHHHH
T ss_pred CCCcChHHHHHHH---------------HhcCC--hHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc---hhHHHH
Confidence 3211111221111 11121 244445554432222222334556677777654332 234566
Q ss_pred HHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEe
Q 016649 272 VHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILV 350 (385)
Q Consensus 272 v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v 350 (385)
++..++...-.+++ .++...++|.|. +++||.|+++|++.++++.+ .++++|||.||++||... ..||+|
T Consensus 136 i~~~l~~~~l~~~~i~s~~~~ldilP~-~a~K~~Al~~L~~~~~~~~~---~vl~aGDSgND~~mL~~~-----~~~vvV 206 (247)
T PF05116_consen 136 IRARLRQRGLRVNVIYSNGRDLDILPK-GASKGAALRYLMERWGIPPE---QVLVAGDSGNDLEMLEGG-----DHGVVV 206 (247)
T ss_dssp HHHHHHCCTCEEEEEECTCCEEEEEET-T-SHHHHHHHHHHHHT--GG---GEEEEESSGGGHHHHCCS-----SEEEE-
T ss_pred HHHHHHHcCCCeeEEEccceeEEEccC-CCCHHHHHHHHHHHhCCCHH---HEEEEeCCCCcHHHHcCc-----CCEEEE
Confidence 77777776533444 457789999999 99999999999999999864 899999999999999554 689999
Q ss_pred eCCCCC--------c--cce-EEeC--ChhHHHHHHHH
Q 016649 351 SSVPKE--------S--KAF-YSLR--DPSEVMEFLKS 375 (385)
Q Consensus 351 ~n~~~~--------t--~A~-y~l~--~~~eV~~~L~~ 375 (385)
+|+.++ . ..+ |..+ ...||++-|+.
T Consensus 207 ~Na~~e~~~~~~~~~~~~~~iy~a~~~~a~GIlegl~~ 244 (247)
T PF05116_consen 207 GNAQPELLSWLLEKLRQQERIYFAQGPYAAGILEGLQH 244 (247)
T ss_dssp TTS-HHHHHHHHHCC-TTE--EE-SS-THHHHHHHHHH
T ss_pred cCCCHHHHHHHHHhcccCCceEecCCCCcHHHHHHHHH
Confidence 998765 1 112 4443 45677777664
No 34
>PLN02423 phosphomannomutase
Probab=99.88 E-value=5.2e-21 Score=180.58 Aligned_cols=211 Identities=19% Similarity=0.300 Sum_probs=131.5
Q ss_pred cCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhCCc---C-ceEEecCceeEeC
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVGLA---E-LYYAGSHGMDIMG 190 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~~~---~-l~~iaenG~~I~~ 190 (385)
+..++++|+|+||||++ ++..++++++++|++|++...|+|+|||+...+...++.. . .++|++||+.+..
T Consensus 4 ~~~~~i~~~D~DGTLl~-----~~~~i~~~~~~ai~~l~~~i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~ 78 (245)
T PLN02423 4 RKPGVIALFDVDGTLTA-----PRKEATPEMLEFMKELRKVVTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHK 78 (245)
T ss_pred CccceEEEEeccCCCcC-----CCCcCCHHHHHHHHHHHhCCEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEe
Confidence 34456777999999998 3567999999999999987899999999999998888632 1 4799999999985
Q ss_pred CCCCCCCCCCcccccccCcCCCcccccccccccc--chHHHHHHHHHHhhh-----hccCcEEeccceeEEEE--eccCC
Q 016649 191 PVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFL--PMIDAVFHSLMENTK-----EINGVKVENNKFCVSVH--YRNVD 261 (385)
Q Consensus 191 ~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~--~~i~~v~~~l~~~~~-----~~~g~~iE~~~~~l~~~--yr~~d 261 (385)
.+.. +. ... ...++ ..+.++.+.+..... ...+.+++.....+.+. +.++.
T Consensus 79 ~g~~-i~---~~~----------------l~~~l~~~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~ 138 (245)
T PLN02423 79 DGKL-IG---TQS----------------LKSFLGEDKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCS 138 (245)
T ss_pred CCEE-EE---Eec----------------ccccCCHHHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCC
Confidence 3322 10 000 00000 122333333322110 12233444322222111 12221
Q ss_pred hh------hH----HHHHHHHHHHHHhCCCcEEE--E-ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC
Q 016649 262 EK------YW----ATVVQRVHEILKQYPTRLRL--T-HGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGD 328 (385)
Q Consensus 262 ~~------~~----~~l~~~v~~~l~~~~~~l~v--~-~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD 328 (385)
.. .+ ....+..+.+.++++ ++.+ + .|..++||.|+ |+|||.||++|+ +. +++++|||
T Consensus 139 ~~~~~~~~~i~~i~~~~~~~~~~l~~~~~-~~~~~~s~~g~~~iDi~~~-gvnKg~al~~L~-----~~---~e~~aFGD 208 (245)
T PLN02423 139 QEERDEFEKYDKVHNIRPKMVSVLREKFA-HLNLTYSIGGQISFDVFPQ-GWDKTYCLQFLE-----DF---DEIHFFGD 208 (245)
T ss_pred HhHHhhHHhhCccchHHHHHHHHHHHhCC-CCcEEEecCCcEEEEEeeC-CCCHHHHHHHhc-----Cc---CeEEEEec
Confidence 11 01 111222233445565 4443 3 45589999999 999999999999 33 48999999
Q ss_pred ----CCCCHHHHHHHHhCCCceEEEeeCCCCCccceEEeCChhHHHHHHHHHH
Q 016649 329 ----DRTDEDAFKELREGNHGYGILVSSVPKESKAFYSLRDPSEVMEFLKSFV 377 (385)
Q Consensus 329 ----~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A~y~l~~~~eV~~~L~~L~ 377 (385)
+.||++||+.-. -.+++ +.+|+++.+.|+.|.
T Consensus 209 ~~~~~~ND~eMl~~~~----~~~~~-------------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 209 KTYEGGNDHEIFESER----TIGHT-------------VTSPDDTREQCTALF 244 (245)
T ss_pred cCCCCCCcHHHHhCCC----cceEE-------------eCCHHHHHHHHHHhc
Confidence 899999999741 24554 467888888887763
No 35
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.86 E-value=3.3e-20 Score=193.21 Aligned_cols=234 Identities=16% Similarity=0.170 Sum_probs=140.8
Q ss_pred cCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCC
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGP 191 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~ 191 (385)
-.++++||+|+||||++. +..++++++++|++|++.+ +|+|||||+...+..++. + ...++|++||+.|+.+
T Consensus 413 ~~~~KLIfsDLDGTLLd~-----d~~i~~~t~eAL~~L~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~ 487 (694)
T PRK14502 413 GQFKKIVYTDLDGTLLNP-----LTYSYSTALDALRLLKDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIP 487 (694)
T ss_pred CceeeEEEEECcCCCcCC-----CCccCHHHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEEC
Confidence 345799999999999983 3457789999999999996 899999999999988875 2 2347999999999987
Q ss_pred CCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhh-------hccCcEEec----------------
Q 016649 192 VRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTK-------EINGVKVEN---------------- 248 (385)
Q Consensus 192 ~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~-------~~~g~~iE~---------------- 248 (385)
.+.. ..+.. .+.......++...-. ...+.++.+.+..... ...+.++..
T Consensus 488 ~~~~--~~~~~----~~~~~~~~iI~~~~l~-~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~ 560 (694)
T PRK14502 488 KDYF--RLPFA----YDRVAGNYLVIELGMA-YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLN 560 (694)
T ss_pred CCcc--ccccc----ccccCCCeEEEEcCCC-HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCC
Confidence 6421 00000 0000000001110000 0112222222211000 000000100
Q ss_pred ---------cceeEEEEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCC
Q 016649 249 ---------NKFCVSVHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCE 319 (385)
Q Consensus 249 ---------~~~~l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~ 319 (385)
+.++..+.+.. + .+..+.+...+++. ++++..|..++||. . ++|||+|+++|++.+|++..
T Consensus 561 ~~~a~~a~~Re~seKIl~~g-d----~e~Leel~~~L~~~--~l~v~~g~rfleI~-~-gvdKG~AL~~L~e~~gI~~~- 630 (694)
T PRK14502 561 LKQAELAKQREYSETVHIEG-D----KRSTNIVLNHIQQS--GLEYSFGGRFYEVT-G-GNDKGKAIKILNELFRLNFG- 630 (694)
T ss_pred HHHHHHHhhccCceeEEEcC-C----HHHHHHHHHHHHHc--CcEEEECCEEEEeC-C-CCCHHHHHHHHHHHhCCCcc-
Confidence 00111111110 1 12234444445544 37777799999998 7 99999999999999998764
Q ss_pred CceEEEE--eCCCCCHHHHHHHHhCCCceEEEeeCCCCCc------cceEEe-CChhHHHHHHHHHH
Q 016649 320 DVLPIYV--GDDRTDEDAFKELREGNHGYGILVSSVPKES------KAFYSL-RDPSEVMEFLKSFV 377 (385)
Q Consensus 320 ~~~vi~~--GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~t------~A~y~l-~~~~eV~~~L~~L~ 377 (385)
.+++| ||+.||++||+++ |+||+|++...+- ...++- .+|.|=.+.+++++
T Consensus 631 --eViafalGDs~NDisMLe~A-----g~gVAM~~~~~~~~~l~~~~~~~~~~~GP~GW~eai~~~L 690 (694)
T PRK14502 631 --NIHTFGLGDSENDYSMLETV-----DSPILVQRPGNKWHKMRLRNPSYVKGVGPEGFSRAVTDII 690 (694)
T ss_pred --ceEEEEcCCcHhhHHHHHhC-----CceEEEcCCCCCCCccCCCCceecCCCCcHHHHHHHHHHH
Confidence 56676 9999999999999 8999998633211 111222 27777766666665
No 36
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.85 E-value=5.5e-20 Score=174.81 Aligned_cols=207 Identities=15% Similarity=0.128 Sum_probs=132.1
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-C-cCceEEecCceeEeCCCCC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-L-AELYYAGSHGMDIMGPVRQ 194 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~-~~l~~iaenG~~I~~~~~~ 194 (385)
.++||+|+||||++. ...+++.++++|++|++.+ +|+++|||+..++..+.. + ...++|++||+.|+.+.+.
T Consensus 1 ~KLIftDLDGTLLd~-----~~~~~~~a~~aL~~Lk~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~ 75 (302)
T PRK12702 1 MRLVLSSLDGSLLDL-----EFNSYGAARQALAALERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHY 75 (302)
T ss_pred CcEEEEeCCCCCcCC-----CCcCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEcccc
Confidence 479999999999984 4467889999999999996 999999999999988875 2 2348999999999988642
Q ss_pred CC----CCCCcccccccCcCCCcc-ccccccccccchHHHHHHHHHHhh-----------hhccCcEE------ecccee
Q 016649 195 SI----PNDNADTIQSTGKQGKEV-NLFQPAREFLPMIDAVFHSLMENT-----------KEINGVKV------ENNKFC 252 (385)
Q Consensus 195 ~~----~~~~~~~~~~~d~~~~~~-~l~~~~~~~~~~i~~v~~~l~~~~-----------~~~~g~~i------E~~~~~ 252 (385)
.. ...+. ...+..+ .+-.+-.+++..++++...+.... ....|.-. ..++|+
T Consensus 76 ~~~~~~~~~~~------~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~S 149 (302)
T PRK12702 76 FPAGILDEQWQ------HRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYS 149 (302)
T ss_pred ccccccccccc------cCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCC
Confidence 10 00000 0000000 000011111122222222211000 01111111 134566
Q ss_pred EEEEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEc---------------------CCCCCHHHHHHHHHH
Q 016649 253 VSVHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRP---------------------VIDWDKGKAVMFLLE 311 (385)
Q Consensus 253 l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P---------------------~~g~nKG~Al~~Ll~ 311 (385)
..+.+..-++. ..+.+++.+ +.+++|..++.+.. - +++||.|+++|.+
T Consensus 150 Ep~~w~~~~~~--------~~~~~~~~g--~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~-~~dKg~A~~~L~~ 218 (302)
T PRK12702 150 EIFSYSGDPAR--------LREAFAQQE--ANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPN-SLPGEQAVQLLLD 218 (302)
T ss_pred cceEecCCHHH--------HHHHHHHcC--CeEEecCceEEecccccccccccccccccccccccC-CCCHHHHHHHHHH
Confidence 66666532221 155566664 88888887777663 3 6799999999999
Q ss_pred HcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeC
Q 016649 312 SLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSS 352 (385)
Q Consensus 312 ~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n 352 (385)
.+.-.. ....++++|||.||++||+++ .++|.|.+
T Consensus 219 ~y~~~~-~~~~tiaLGDspND~~mLe~~-----D~~vvi~~ 253 (302)
T PRK12702 219 CYQRHL-GPIKALGIGCSPPDLAFLRWS-----EQKVVLPS 253 (302)
T ss_pred HHHhcc-CCceEEEecCChhhHHHHHhC-----CeeEEecC
Confidence 987543 345899999999999999999 58998854
No 37
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.84 E-value=2e-20 Score=174.43 Aligned_cols=203 Identities=20% Similarity=0.308 Sum_probs=118.1
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC-Cc-CceEEecCceeEeCCCCCCC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG-LA-ELYYAGSHGMDIMGPVRQSI 196 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~-~~-~l~~iaenG~~I~~~~~~~~ 196 (385)
+||+|+||||+.. ..++++++++|++|++.+ +++++|||++..+..++. +. ..++|++||+.|+.+....
T Consensus 1 li~~DlDGTLl~~------~~~~~~~~~ai~~l~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~- 73 (225)
T TIGR02461 1 VIFTDLDGTLLPP------GYEPGPAREALEELKDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYF- 73 (225)
T ss_pred CEEEeCCCCCcCC------CCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccc-
Confidence 5899999999983 135678999999999986 899999999999988774 21 2379999999999875320
Q ss_pred CCCCcccccccCcCCCccccccccccccchHHHHHHHHHH-h-----h-------hhccCcE-----E-eccceeEEEEe
Q 016649 197 PNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLME-N-----T-------KEINGVK-----V-ENNKFCVSVHY 257 (385)
Q Consensus 197 ~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~-~-----~-------~~~~g~~-----i-E~~~~~l~~~y 257 (385)
.+..... +..+..+ ++...-. ...+.++.+.+.+ + . ....+.. . ..+.++-.+ +
T Consensus 74 --~~~~~~~--~~~~~~~-i~~~~l~-~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~-~ 146 (225)
T TIGR02461 74 --PFPVGAG--REVGNYE-VIELGKP-VAKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETI-F 146 (225)
T ss_pred --ccccccc--ccCCCeE-EEEcCCC-HHHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcc-c
Confidence 0000000 0000000 0000000 0011222222211 0 0 0000000 0 000000000 0
Q ss_pred ccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHH
Q 016649 258 RNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFK 337 (385)
Q Consensus 258 r~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk 337 (385)
.. +++.+.. +.+.+++. .+.+.++..++++ +. ++|||.|++++++.+++... ...+++|||+.||++||+
T Consensus 147 ~~-~~e~~~~----~~~~~~~~--~~~~~~s~~~~~i-~~-~~sK~~al~~l~~~~~~~~~-~~~~i~~GD~~nD~~ml~ 216 (225)
T TIGR02461 147 LW-SREGWEA----ILVTARAR--GLKYTHGGRFYTV-HG-GSDKGKAIKRLLDLYKLRPG-AIESVGLGDSENDFPMFE 216 (225)
T ss_pred CC-CHHHHHH----HHHHHHHc--CCcEEECCEEEEE-CC-CCCHHHHHHHHHHHhccccC-cccEEEEcCCHHHHHHHH
Confidence 00 1112222 22222332 4777777777875 77 99999999999999987431 237999999999999999
Q ss_pred HHHhCCCceEEEee
Q 016649 338 ELREGNHGYGILVS 351 (385)
Q Consensus 338 ~~~~~~~g~~V~v~ 351 (385)
++ |+||+||
T Consensus 217 ~a-----g~~v~v~ 225 (225)
T TIGR02461 217 VV-----DLAFLVG 225 (225)
T ss_pred hC-----CCcEecC
Confidence 99 8999885
No 38
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=99.76 E-value=5.9e-23 Score=216.92 Aligned_cols=377 Identities=29% Similarity=0.259 Sum_probs=272.2
Q ss_pred CCCCCCCCCcccCC-CCCcccccccccCcccCCCC--CCCCCCcc--cccccccCCCcccccccchHHHHhcCCCccccc
Q 016649 2 DLKTNHSAPVLTDP-APISKSRLGIHSSLLPYSPS--GTFPSDLF--LAIPRKKTGVLDDVRACSWLDAMKSSSPPPKWM 76 (385)
Q Consensus 2 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~--~~~~~~~~~~~~~~~~n~w~~~~~~~s~~~~~~ 76 (385)
.+..++..||++|+ ...+..+...-+.+.|.-.. .+...... .--..++.........|.|++.|. ++|..-..
T Consensus 69 ~~~~~~~~pv~~~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwih 147 (732)
T KOG1050|consen 69 LLEEFDSVPVFLDDELFDSYYNGYCKSILWPLFHYMLIPSEPAFKLFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIH 147 (732)
T ss_pred hhhhcCceeeecCCchhhhhhhhhhhhcccceeecccCCCchhhhhhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEE
Confidence 34567789999987 44444444555556553222 11111110 011112223344677888899988 77776553
Q ss_pred ccccCcccCccccchhHhHHH-HhCCCCCCcHHHHHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 77 AKESNNEFSSTDTDVAYRTWQ-RQYPSALTSFEQILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~w~-~~~~~~L~~~~~~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
-..+.. ..........++|+ -.+++++.++|.+......+++|.++|+||||.++..++++++++-.++.+..+.+..
T Consensus 148 dyhlml-lp~~lr~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~ 226 (732)
T KOG1050|consen 148 DYHLML-LPQMLRERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASK 226 (732)
T ss_pred cchhhc-cchhhhcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhcc
Confidence 333211 01133445578999 7789999999999999999999999999999999999999999999999999999999
Q ss_pred CCEEEEcCCChhH----------HHHHhCCcCceEEecCceeEeCCCCC-CCCCCCcccccccCcCCCcccccccccccc
Q 016649 156 FPTAIISGRSRDK----------VYEFVGLAELYYAGSHGMDIMGPVRQ-SIPNDNADTIQSTGKQGKEVNLFQPAREFL 224 (385)
Q Consensus 156 ~~v~I~SGR~~~~----------l~~~~~~~~l~~iaenG~~I~~~~~~-~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~ 224 (385)
++.++++||++.. +++++++.++++++++|+.|.++.+. .+......+......+.+...+.++..++.
T Consensus 227 ~~~~~v~~rgr~~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~p 306 (732)
T KOG1050|consen 227 FPTAGVSGRGRDVSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYP 306 (732)
T ss_pred CCcceEEeccceeeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhCh
Confidence 8899999999888 88888889999999999999988632 211111111111111111223445555666
Q ss_pred chHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHH
Q 016649 225 PMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGK 304 (385)
Q Consensus 225 ~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~ 304 (385)
+|+++|.........++++..+++.++|+..||++++.+++......+..+...++ ..+++++..+.|+.|.+.|.||.
T Consensus 307 e~~~kVvliqi~~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~-~~~l~a~~~Vaev~~v~s~rdGm 385 (732)
T KOG1050|consen 307 EWIDKVVLIQIENPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLP-FLELLALYKVAEVCPVTSWRDGM 385 (732)
T ss_pred hhhceEEEEEEecCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCC-HHHHhhhHHhhhheeeccccccc
Confidence 66666654333334567777788889999999999988877655555555556666 66778888999999999999999
Q ss_pred HHHHHHHHcCCCC--CCCceEEEEeCCCCCHHHHHHHHhC-CCceEEEeeCCCCCccceEEeCChhHHHH-HHHHHHHhh
Q 016649 305 AVMFLLESLGLNN--CEDVLPIYVGDDRTDEDAFKELREG-NHGYGILVSSVPKESKAFYSLRDPSEVME-FLKSFVMWK 380 (385)
Q Consensus 305 Al~~Ll~~lg~~~--~~~~~vi~~GD~~nDe~mfk~~~~~-~~g~~V~v~n~~~~t~A~y~l~~~~eV~~-~L~~L~~~~ 380 (385)
++..+...++... .......++||+.+|++.+..++.- .++++++|+.+...+.+.+.++.+..+.. ++..++.|.
T Consensus 386 nl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~W~ 465 (732)
T KOG1050|consen 386 NLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVYWA 465 (732)
T ss_pred chhhhHHHHhhcccCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHHHH
Confidence 9999999998876 6678899999999999999998876 45788888888888888888888877776 677777775
Q ss_pred c
Q 016649 381 Q 381 (385)
Q Consensus 381 ~ 381 (385)
+
T Consensus 466 ~ 466 (732)
T KOG1050|consen 466 K 466 (732)
T ss_pred H
Confidence 4
No 39
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.58 E-value=8.4e-14 Score=125.69 Aligned_cols=204 Identities=20% Similarity=0.285 Sum_probs=124.2
Q ss_pred CCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHH---hCCcCceEEecCceeEeCCC
Q 016649 117 KRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEF---VGLAELYYAGSHGMDIMGPV 192 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~---~~~~~l~~iaenG~~I~~~~ 192 (385)
-..|||+|+||||+++.-++ +.....+.+|.+.+ +|+.||..++.++..+ +++++..+|+|||+.|+.|.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~------~pA~pv~~el~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEW------QPAAPVLLELKDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred cceEEEEcccCcccCCCCCC------CccchHHHHHHHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 35899999999999954333 45667888999886 9999999999887665 46788999999999999986
Q ss_pred CCCCCCCCcccccccCcCCCccc-cccccccccchHHHHHHHHHHhhhhccCcEE-----------------------ec
Q 016649 193 RQSIPNDNADTIQSTGKQGKEVN-LFQPAREFLPMIDAVFHSLMENTKEINGVKV-----------------------EN 248 (385)
Q Consensus 193 ~~~~~~~~~~~~~~~d~~~~~~~-l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~i-----------------------E~ 248 (385)
+.. .++ ..++++. +.. .+.-..++.+...+.. .+.+-|..- -.
T Consensus 80 ~~~---~~~-------~~~r~~~g~~~--~elg~~l~~ire~l~k-Lee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~ 146 (274)
T COG3769 80 GWF---PFD-------GKPREISGISH--IELGKVLEKIREKLDK-LEEHFGFTTFDDVDDEEIAEWTGLPREQAALAML 146 (274)
T ss_pred ccc---ccC-------CCCceecceEe--eehhhhHHHHHHHHHH-HHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHH
Confidence 531 111 1011100 000 0000112223222211 111111100 01
Q ss_pred cceeEEEEeccCChhhHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC
Q 016649 249 NKFCVSVHYRNVDEKYWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGD 328 (385)
Q Consensus 249 ~~~~l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD 328 (385)
++++.++..|.-+. ........+.+- ++.+++|..+-.+... ...||.|+..+++.+..-... ..++.+||
T Consensus 147 rEyseti~~rs~d~-----~~~~~~~~L~e~--glt~v~garf~~v~~a-s~gKg~Aa~~ll~~y~rl~~~-r~t~~~GD 217 (274)
T COG3769 147 REYSETIIWRSSDE-----RMAQFTARLNER--GLTFVHGARFWHVLDA-SAGKGQAANWLLETYRRLGGA-RTTLGLGD 217 (274)
T ss_pred HHhhhheeecccch-----HHHHHHHHHHhc--CceEEeccceEEEecc-ccCccHHHHHHHHHHHhcCce-eEEEecCC
Confidence 11222222221110 111223334433 5899999888888777 677999999999987543321 25999999
Q ss_pred CCCCHHHHHHHHhCCCceEEEeeCC
Q 016649 329 DRTDEDAFKELREGNHGYGILVSSV 353 (385)
Q Consensus 329 ~~nDe~mfk~~~~~~~g~~V~v~n~ 353 (385)
+.||.+||++. .+++.|++-
T Consensus 218 g~nD~Pl~ev~-----d~AfiV~~l 237 (274)
T COG3769 218 GPNDAPLLEVM-----DYAFIVKGL 237 (274)
T ss_pred CCCcccHHHhh-----hhheeeccc
Confidence 99999999998 488888853
No 40
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=99.39 E-value=8.8e-12 Score=110.97 Aligned_cols=198 Identities=20% Similarity=0.278 Sum_probs=129.5
Q ss_pred HHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhCC----cCceEEecCcee
Q 016649 112 KSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVGL----AELYYAGSHGMD 187 (385)
Q Consensus 112 ~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~~----~~l~~iaenG~~ 187 (385)
++++-.+.|+.+|.||||++ .+..+++++.+.|++|+....+.++-|....++.+.+|. .-.|..+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~-----~r~~~~~e~~~~l~~lr~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP-----PRQKVTPEMLEFLQKLRKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc-----ccccCCHHHHHHHHHHhhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 45667778999999999999 377899999999999998899999999999999999972 235899999988
Q ss_pred EeCCCCCCCCCCCcccccccCcCCCccccccccccc-cchHHHHHHHHHHhh-hhccCcEEeccceeEEEEe--ccCChh
Q 016649 188 IMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREF-LPMIDAVFHSLMENT-KEINGVKVENNKFCVSVHY--RNVDEK 263 (385)
Q Consensus 188 I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~-~~~i~~v~~~l~~~~-~~~~g~~iE~~~~~l~~~y--r~~d~~ 263 (385)
-+..+..... +..+ + ...++. ...++-+.+++.+.- .--.|.+||-+.-.+.+.. |++..+
T Consensus 80 ~yk~gk~~~~---Qsi~---~---------~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~E 144 (252)
T KOG3189|consen 80 AYKGGKLLSK---QSII---N---------HLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQE 144 (252)
T ss_pred EeeCCcchhH---HHHH---H---------HHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHH
Confidence 7765543100 0000 0 001111 111222223222210 1123778887766665553 444332
Q ss_pred hH---------HHHH----HHHHHHHHhCCCcEEE-EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC-
Q 016649 264 YW---------ATVV----QRVHEILKQYPTRLRL-THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGD- 328 (385)
Q Consensus 264 ~~---------~~l~----~~v~~~l~~~~~~l~v-~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD- 328 (385)
.. ..+. +.+++-.+++ ++.+ ..|.-+++|.|. ||+|-..+++|-.. |++ .+-+|||
T Consensus 145 ER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~--gLtFSIGGQISfDvFP~-GWDKtyCLqhle~d-gf~-----~IhFFGDk 215 (252)
T KOG3189|consen 145 ERNEFEELDKKHKIREKFVEALREEFADY--GLTFSIGGQISFDVFPK-GWDKTYCLQHLEKD-GFD-----TIHFFGDK 215 (252)
T ss_pred HHHHHHHhhhhhhhHHHHHHHHHHHhccc--CeeEEECCeEEEeecCC-CcchhHHHHHhhhc-CCc-----eEEEeccc
Confidence 11 1222 3333333444 4776 456789999999 99999999998765 543 7999999
Q ss_pred ---CCCCHHHHHH
Q 016649 329 ---DRTDEDAFKE 338 (385)
Q Consensus 329 ---~~nDe~mfk~ 338 (385)
+.||.+.|.-
T Consensus 216 T~~GGNDyEIf~d 228 (252)
T KOG3189|consen 216 TMPGGNDYEIFAD 228 (252)
T ss_pred cCCCCCcceeeeC
Confidence 5688776644
No 41
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=99.25 E-value=6.3e-11 Score=129.73 Aligned_cols=196 Identities=12% Similarity=0.205 Sum_probs=113.7
Q ss_pred CCEEEE--EecCCccCCCCCCCCcccCCHHHHHHHHHHHh--c---CCEEEEcCCChhHHHHHhC---Cc---CceEEec
Q 016649 117 KRIALF--LDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAK--Y---FPTAIISGRSRDKVYEFVG---LA---ELYYAGS 183 (385)
Q Consensus 117 k~~li~--lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~--~---~~v~I~SGR~~~~l~~~~~---~~---~l~~iae 183 (385)
.+++|+ +|+|+| +. ..+.+++.++.+.. . ..++++|||++..+..++. ++ +..+||+
T Consensus 769 ~~~~~via~D~d~~-~~---------~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~~~~lp~~~PD~lI~~ 838 (1050)
T TIGR02468 769 RKRLFVIAVDCYDD-KD---------LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLKSGGLNPTDFDALICN 838 (1050)
T ss_pred cceEEEEEeccCCC-CC---------hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHHhCCCCCCCCCEEEeC
Confidence 356666 999999 22 12333333444431 2 2689999999999999883 54 5689999
Q ss_pred CceeEeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhh--------ccCcEEe----ccce
Q 016649 184 HGMDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKE--------INGVKVE----NNKF 251 (385)
Q Consensus 184 nG~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~--------~~g~~iE----~~~~ 251 (385)
-|+.|+++...- .+.... ..|..|.. +....| .-+.+.+.+...... .++...+ ...|
T Consensus 839 vGTeIyy~~~~~--~~~~~~--~~D~~w~~----hI~~rW--~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~~q~~~ 908 (1050)
T TIGR02468 839 SGSELYYPSLNG--SEEGKL--VADQDYHS----HIEYRW--GGEGLRKTLVKWAASINEKKGENEEQIVEEDEESSTDH 908 (1050)
T ss_pred CCcceeccCcCC--CCCCCc--eECHHHHH----HHHccC--CcHHHHHHHHHHhhhcccccccccccceecChhhCCCc
Confidence 999999873100 000000 00111110 001111 123344334333221 1223333 3457
Q ss_pred eEEEEeccCChhhHHHHHHHHHHHHHhCCCcEEE--EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceE-EEEeC
Q 016649 252 CVSVHYRNVDEKYWATVVQRVHEILKQYPTRLRL--THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLP-IYVGD 328 (385)
Q Consensus 252 ~l~~~yr~~d~~~~~~l~~~v~~~l~~~~~~l~v--~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~v-i~~GD 328 (385)
|+++...+.+. ....+.++..+...+-..++ .++..+|+|.|. ..|||.||++|..++|++.+ .+ +++||
T Consensus 909 k~SY~v~d~~~---~~~v~elr~~Lr~~gLr~~~iys~~~~~LDVlP~-~ASKgqAlRyL~~rwgi~l~---~v~VfaGd 981 (1050)
T TIGR02468 909 CYAFKVKDPSK---VPPVKELRKLLRIQGLRCHAVYCRNGTRLNVIPL-LASRSQALRYLFVRWGIELA---NMAVFVGE 981 (1050)
T ss_pred eEEEEecCccc---CccHHHHHHHHHhCCCceEEEeecCCcEeeeeeC-CCCHHHHHHHHHHHcCCChH---HeEEEecc
Confidence 77765322111 12345556666665422333 455689999999 99999999999999999986 55 66999
Q ss_pred CCC-C-HHHHHHH
Q 016649 329 DRT-D-EDAFKEL 339 (385)
Q Consensus 329 ~~n-D-e~mfk~~ 339 (385)
+.| | ++|+.-+
T Consensus 982 SGntD~e~Ll~G~ 994 (1050)
T TIGR02468 982 SGDTDYEGLLGGL 994 (1050)
T ss_pred CCCCCHHHHhCCc
Confidence 999 9 5565444
No 42
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=99.21 E-value=1.2e-10 Score=106.54 Aligned_cols=195 Identities=17% Similarity=0.271 Sum_probs=121.1
Q ss_pred HHHHHHHHHhcCCEEEEcCCChhHHHHHhC-C----cCceEEecCceeEeCCCCCCCCCCCcccccccCcCCCccccccc
Q 016649 145 MRAVVKNVAKYFPTAIISGRSRDKVYEFVG-L----AELYYAGSHGMDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQP 219 (385)
Q Consensus 145 ~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~-~----~~l~~iaenG~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~ 219 (385)
|.+.|++|.+...|+|+||..+.++++.+. . .-.|+.++||...+..+.. .|...+. + .. .
T Consensus 1 M~~~L~~L~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~----~~~~~~~--~-------~l-g 66 (220)
T PF03332_consen 1 MAELLQKLRKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGEL----IWSQSIA--E-------FL-G 66 (220)
T ss_dssp HHHHHHHHHTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEE----EEE--HH--H-------HH-H
T ss_pred CHHHHHHHHhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCc----hhhHhHH--H-------Hc-C
Confidence 678999999999999999999999999993 2 2348999999998876543 2211100 0 00 0
Q ss_pred cccccchHHHHHHHHHHh-hhhccCcEEeccceeEEEEe--ccCChhh---H------HHHHHHHH-HHHHhCC-CcEEE
Q 016649 220 AREFLPMIDAVFHSLMEN-TKEINGVKVENNKFCVSVHY--RNVDEKY---W------ATVVQRVH-EILKQYP-TRLRL 285 (385)
Q Consensus 220 ~~~~~~~i~~v~~~l~~~-~~~~~g~~iE~~~~~l~~~y--r~~d~~~---~------~~l~~~v~-~~l~~~~-~~l~v 285 (385)
.++....++-+.+.+.+. .....|.+||.+...+++.. |++..+. | ..+.+.+. .+-+++| .++++
T Consensus 67 ee~~~~~in~~l~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~ 146 (220)
T PF03332_consen 67 EEKLQKLINFCLRYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTF 146 (220)
T ss_dssp HHHHHHHHHHHHHHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEE
T ss_pred HHHHHHHHHHHHHHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEE
Confidence 011111122222222211 01224789999998888875 4554332 2 11333333 3335677 24777
Q ss_pred -EecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeC----CCCCHHHHHHHHhCCCceEEEeeCCCCCccce
Q 016649 286 -THGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGD----DRTDEDAFKELREGNHGYGILVSSVPKESKAF 360 (385)
Q Consensus 286 -~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD----~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A~ 360 (385)
.-|..+++|.|+ ||||..++++|.+.. .+.+.+||| +.||.++|.-.+ -.|++
T Consensus 147 siGGqiSiDvfp~-GwDKty~Lr~l~~~~------~~~I~FfGDkt~pGGNDyei~~~~r----t~g~~----------- 204 (220)
T PF03332_consen 147 SIGGQISIDVFPK-GWDKTYCLRHLEDEG------FDEIHFFGDKTFPGGNDYEIFEDPR----TIGHT----------- 204 (220)
T ss_dssp EEETTTEEEEEET-T-SGGGGGGGTTTTT-------SEEEEEESS-STTSTTHHHHHSTT----SEEEE-----------
T ss_pred ecCCceEEccccC-CccHHHHHHHHHhcc------cceEEEEehhccCCCCCceeeecCC----ccEEE-----------
Confidence 467899999999 999999999987643 248999999 679999998752 24543
Q ss_pred EEeCChhHHHHHHHHHH
Q 016649 361 YSLRDPSEVMEFLKSFV 377 (385)
Q Consensus 361 y~l~~~~eV~~~L~~L~ 377 (385)
+.+|++.++.|+.|.
T Consensus 205 --V~~p~DT~~~l~~l~ 219 (220)
T PF03332_consen 205 --VTSPEDTIKQLKELF 219 (220)
T ss_dssp ---SSHHHHHHHHHHHH
T ss_pred --eCCHHHHHHHHHHHh
Confidence 578888888888875
No 43
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.10 E-value=4.4e-10 Score=98.73 Aligned_cols=72 Identities=25% Similarity=0.271 Sum_probs=60.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeCCh--hH-HHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLRDP--SE-VMEFLKS 375 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~~~--~e-V~~~L~~ 375 (385)
+|..+++.+++++|++.+ .+++|||+.||.+|++.+ |++++|.++... ..|+|++..+ +| +.+++++
T Consensus 76 ~k~~~~~~~~~~~~~~~~---~~~~vGDs~~D~~~~~~a-----g~~~~v~~~~~~~~~~a~~i~~~~~~~g~~~~~~~~ 147 (154)
T TIGR01670 76 NKLIAFSDILEKLALAPE---NVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLIPRADYVTRIAGGRGAVREVCEL 147 (154)
T ss_pred chHHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCCcCHHHHHhCCEEecCCCCCcHHHHHHHH
Confidence 578899999999998764 899999999999999998 789999887643 5789998754 34 9999999
Q ss_pred HHHhh
Q 016649 376 FVMWK 380 (385)
Q Consensus 376 L~~~~ 380 (385)
++...
T Consensus 148 ~~~~~ 152 (154)
T TIGR01670 148 LLLAQ 152 (154)
T ss_pred HHHhh
Confidence 98754
No 44
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=98.96 E-value=1.3e-09 Score=98.38 Aligned_cols=56 Identities=29% Similarity=0.338 Sum_probs=47.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLR 364 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~ 364 (385)
+|..+++.+++.+|++.+ ++++|||+.||.+|++.+ |++++|+++... ..|+|++.
T Consensus 96 ~k~~~l~~~~~~~gl~~~---ev~~VGDs~~D~~~a~~a-----G~~~~v~~~~~~~~~~a~~v~~ 153 (183)
T PRK09484 96 NKLIAFSDLLEKLAIAPE---QVAYIGDDLIDWPVMEKV-----GLSVAVADAHPLLLPRADYVTR 153 (183)
T ss_pred cHHHHHHHHHHHhCCCHH---HEEEECCCHHHHHHHHHC-----CCeEecCChhHHHHHhCCEEec
Confidence 477899999999998764 899999999999999998 889888765432 57899985
No 45
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.94 E-value=5.8e-10 Score=109.33 Aligned_cols=67 Identities=21% Similarity=0.252 Sum_probs=57.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC--ChhHHHHHHH
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLR--DPSEVMEFLK 374 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~--~~~eV~~~L~ 374 (385)
+-.|+.+++.+++.+|++.+ ++++|||+.||++|++.+ |+||++ |+.+. ..|++.++ +-++|+-+|-
T Consensus 246 ~k~K~~~L~~la~~lgi~~~---qtIaVGDg~NDl~m~~~A-----GlgiA~-nAkp~Vk~~Ad~~i~~~~l~~~l~~~~ 316 (322)
T PRK11133 246 AQYKADTLTRLAQEYEIPLA---QTVAIGDGANDLPMIKAA-----GLGIAY-HAKPKVNEQAQVTIRHADLMGVLCILS 316 (322)
T ss_pred cccHHHHHHHHHHHcCCChh---hEEEEECCHHHHHHHHHC-----CCeEEe-CCCHHHHhhCCEEecCcCHHHHHHHhc
Confidence 34899999999999999875 899999999999999999 899999 77654 68999996 5677777664
No 46
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.77 E-value=2.1e-08 Score=83.54 Aligned_cols=55 Identities=22% Similarity=0.287 Sum_probs=44.2
Q ss_pred EEEEecCCccCCCCCC---CCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 120 ALFLDYDGTLSPIVDN---PDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 120 li~lD~DGTL~~~~~~---p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+++||+||||++.... .....+.+.+.+.|++|++++ +++|+|||....+..+++
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~ivS~~~~~~~~~~~~ 59 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKELKEKGIKLALATNKSRREVLELLE 59 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHHHHCCCeEEEEeCchHHHHHHHHH
Confidence 4789999999984211 012367899999999999986 899999999998888775
No 47
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.62 E-value=6.7e-08 Score=85.21 Aligned_cols=73 Identities=10% Similarity=0.023 Sum_probs=55.3
Q ss_pred EEEEecCCccCCCCCC------CCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHH---HHh--------CCcCceEE
Q 016649 120 ALFLDYDGTLSPIVDN------PDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVY---EFV--------GLAELYYA 181 (385)
Q Consensus 120 li~lD~DGTL~~~~~~------p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~---~~~--------~~~~l~~i 181 (385)
+||+|+||||+..... -....+++.+.++++++++++ +++++|||+...+. +++ +++..+++
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~~~~~~~~lp~g~li 80 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQIKQDGHNLPHGPVL 80 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHHhhhccccCCCceEE
Confidence 4899999999984200 001478999999999999997 89999999988774 333 14445899
Q ss_pred ecCceeEeCCC
Q 016649 182 GSHGMDIMGPV 192 (385)
Q Consensus 182 aenG~~I~~~~ 192 (385)
+.||+.+....
T Consensus 81 ~~~g~~~~~~~ 91 (157)
T smart00775 81 LSPDRLFAALH 91 (157)
T ss_pred EcCCcchhhhh
Confidence 99999886533
No 48
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.24 E-value=9.6e-07 Score=78.81 Aligned_cols=70 Identities=23% Similarity=0.335 Sum_probs=57.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC--Chh-HHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLR--DPS-EVMEFLKS 375 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~--~~~-eV~~~L~~ 375 (385)
.|-..++.+++.++++.+ ++++|||+.||++|++.+ |++++|+|+... ..|+|++. +.+ .+.++++.
T Consensus 82 pkp~~~~~~~~~l~~~~~---ev~~iGD~~nDi~~~~~a-----g~~~am~nA~~~lk~~A~~I~~~~~~~g~v~e~~e~ 153 (169)
T TIGR02726 82 KKTEPYAQMLEEMNISDA---EVCYVGDDLVDLSMMKRV-----GLAVAVGDAVADVKEAAAYVTTARGGHGAVREVAEL 153 (169)
T ss_pred CCHHHHHHHHHHcCcCHH---HEEEECCCHHHHHHHHHC-----CCeEECcCchHHHHHhCCEEcCCCCCCCHHHHHHHH
Confidence 567899999999998764 899999999999999998 899999998764 68999875 333 35677777
Q ss_pred HHH
Q 016649 376 FVM 378 (385)
Q Consensus 376 L~~ 378 (385)
++.
T Consensus 154 il~ 156 (169)
T TIGR02726 154 ILK 156 (169)
T ss_pred HHH
Confidence 764
No 49
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.21 E-value=2.2e-06 Score=72.65 Aligned_cols=52 Identities=15% Similarity=0.051 Sum_probs=40.7
Q ss_pred EEEEEecCCccCCCCCCC-CcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHH
Q 016649 119 IALFLDYDGTLSPIVDNP-DCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVY 170 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p-~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~ 170 (385)
+++++|+||||+.....+ ....+.++++++|+++.+.+ .++++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 589999999998742211 11346789999999998875 89999999998765
No 50
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.20 E-value=3.3e-06 Score=80.96 Aligned_cols=73 Identities=18% Similarity=0.057 Sum_probs=56.4
Q ss_pred cCCCEEEEEecCCccCCCCCCCCcccC-CHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC---CcC-ceEEecCceeE
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDCAFM-SDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG---LAE-LYYAGSHGMDI 188 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~~~i-s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---~~~-l~~iaenG~~I 188 (385)
=.-.++|+||+||||+... ....+ +|.+.++|.+|.+.+ +++|+|++++..+.+.++ +.. +..|.++|...
T Consensus 123 ~~~~kvIvFDLDgTLi~~~---~~v~irdPgV~EaL~~LkekGikLaIaTS~~Re~v~~~L~~lGLd~YFdvIIs~Gdv~ 199 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDE---EPVRIRDPRIYDSLTELKKRGCILVLWSYGDRDHVVESMRKVKLDRYFDIIISGGHKA 199 (301)
T ss_pred cccceEEEEecCCCCcCCC---CccccCCHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHcCCCcccCEEEECCccc
Confidence 3457899999999999941 12234 499999999999997 899999999998887764 443 24788888776
Q ss_pred eC
Q 016649 189 MG 190 (385)
Q Consensus 189 ~~ 190 (385)
..
T Consensus 200 ~~ 201 (301)
T TIGR01684 200 EE 201 (301)
T ss_pred cC
Confidence 65
No 51
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.07 E-value=1.7e-06 Score=74.86 Aligned_cols=70 Identities=27% Similarity=0.286 Sum_probs=59.8
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC---ChhHHHHHHH
Q 016649 300 WDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLR---DPSEVMEFLK 374 (385)
Q Consensus 300 ~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~---~~~eV~~~L~ 374 (385)
-||-.|.+.|++++++..+ ++.|+||+.||+++|+.+ |+++++.++.+. ..|.|++. +...|.++++
T Consensus 82 ~dK~~a~~~L~~~~~l~~e---~~ayiGDD~~Dlpvm~~v-----Gls~a~~dAh~~v~~~a~~Vt~~~GG~GAvREv~d 153 (170)
T COG1778 82 SDKLAAFEELLKKLNLDPE---EVAYVGDDLVDLPVMEKV-----GLSVAVADAHPLLKQRADYVTSKKGGEGAVREVCD 153 (170)
T ss_pred HhHHHHHHHHHHHhCCCHH---HhhhhcCccccHHHHHHc-----CCcccccccCHHHHHhhHhhhhccCcchHHHHHHH
Confidence 4899999999999999875 899999999999999998 899999998876 67999985 4455667766
Q ss_pred HHH
Q 016649 375 SFV 377 (385)
Q Consensus 375 ~L~ 377 (385)
-+.
T Consensus 154 lil 156 (170)
T COG1778 154 LIL 156 (170)
T ss_pred HHH
Confidence 554
No 52
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.91 E-value=2.2e-05 Score=75.41 Aligned_cols=72 Identities=13% Similarity=-0.039 Sum_probs=55.3
Q ss_pred cCCCEEEEEecCCccCCCCCCCCcccC---CHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC---CcCc-eEEecCce
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDCAFM---SDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG---LAEL-YYAGSHGM 186 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~~~i---s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~---~~~l-~~iaenG~ 186 (385)
-...++|++|+||||+.. ...+ ++.+.++|.+|++.+ +++|+|+.++..+...++ +... ..|.++|.
T Consensus 125 ~~~~~~i~~D~D~TL~~~-----~~~v~irdp~V~EtL~eLkekGikLaIvTNg~Re~v~~~Le~lgL~~yFDvII~~g~ 199 (303)
T PHA03398 125 WEIPHVIVFDLDSTLITD-----EEPVRIRDPFVYDSLDELKERGCVLVLWSYGNREHVVHSLKETKLEGYFDIIICGGR 199 (303)
T ss_pred eeeccEEEEecCCCccCC-----CCccccCChhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHcCCCccccEEEECCC
Confidence 345789999999999994 3334 699999999999997 899999888888877764 4432 36777777
Q ss_pred eEeCC
Q 016649 187 DIMGP 191 (385)
Q Consensus 187 ~I~~~ 191 (385)
.....
T Consensus 200 i~~k~ 204 (303)
T PHA03398 200 KAGEY 204 (303)
T ss_pred ccccc
Confidence 66554
No 53
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=97.51 E-value=8.9e-05 Score=70.19 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=49.5
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcC---CChhHHHHHhC---C--cCceEEecCceeEe
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISG---RSRDKVYEFVG---L--AELYYAGSHGMDIM 189 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG---R~~~~l~~~~~---~--~~l~~iaenG~~I~ 189 (385)
++|++|+||||... ...++ .+.++|++|.+++ +++++|| |++..+...+. + ....+++++|+.+.
T Consensus 2 ~~~~~D~DGtl~~~-----~~~i~-~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~ 75 (249)
T TIGR01457 2 KGYLIDLDGTMYKG-----KERIP-EAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATAD 75 (249)
T ss_pred CEEEEeCCCceEcC-----CeeCc-CHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHH
Confidence 57899999999983 23444 7999999999997 8999995 88988887763 2 23347777777543
No 54
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.48 E-value=0.0002 Score=60.75 Aligned_cols=56 Identities=18% Similarity=0.117 Sum_probs=42.0
Q ss_pred EEEEEecCCccCCCCCCCCcc-------cCCHHHHHHHHHHHhcC-CEEEEcCC-ChhHHHHHhC
Q 016649 119 IALFLDYDGTLSPIVDNPDCA-------FMSDAMRAVVKNVAKYF-PTAIISGR-SRDKVYEFVG 174 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~-------~is~~~~~aL~~L~~~~-~v~I~SGR-~~~~l~~~~~ 174 (385)
+++++|+||||++........ .+.+.+.+.|+.|.+++ +++|+|++ +...+...+.
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~~~l~ 65 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYNDDPHVAYELLK 65 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHHHHHH
Confidence 578999999999862110011 24689999999999886 99999999 6766666654
No 55
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=97.36 E-value=0.0002 Score=60.61 Aligned_cols=56 Identities=20% Similarity=0.255 Sum_probs=41.7
Q ss_pred EEEEEecCCccCCCCC--CC-CcccCCHHHHHHHHHHHhcC-CEEEEcCCC--------hhHHHHHhC
Q 016649 119 IALFLDYDGTLSPIVD--NP-DCAFMSDAMRAVVKNVAKYF-PTAIISGRS--------RDKVYEFVG 174 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~--~p-~~~~is~~~~~aL~~L~~~~-~v~I~SGR~--------~~~l~~~~~ 174 (385)
|+++||+||||++... ++ ....+.+.++++|+.|.+.+ +++|+|+++ ...+..++.
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L~~~g~~l~i~Sn~~~~~~~~~~~~~~~~~l~ 68 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAELKEAGYKVVIVTNQSGIGRGKFSSGRVARRLE 68 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHHHHCCCEEEEEECCccccccHHHHHHHHHHHH
Confidence 5789999999995211 01 13456789999999999886 999999998 555555553
No 56
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.29 E-value=0.00056 Score=60.82 Aligned_cols=50 Identities=16% Similarity=0.119 Sum_probs=36.4
Q ss_pred CCEEEEEecCCccCCCCC------CCCccc-CCHHHHHHHHHHHhcC-CEEEEcCCCh
Q 016649 117 KRIALFLDYDGTLSPIVD------NPDCAF-MSDAMRAVVKNVAKYF-PTAIISGRSR 166 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~------~p~~~~-is~~~~~aL~~L~~~~-~v~I~SGR~~ 166 (385)
+.+++++|+||||+...+ +|++-+ +-+.+.++|++|.+.+ +++|+|..+.
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 467888999999997422 111111 3478999999999886 8999997654
No 57
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=97.22 E-value=0.00029 Score=66.98 Aligned_cols=65 Identities=14% Similarity=0.149 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCceEEEeeCCC---C-----CccceEEeCChhHHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHGYGILVSSVP---K-----ESKAFYSLRDPSEVMEF 372 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g~~V~v~n~~---~-----~t~A~y~l~~~~eV~~~ 372 (385)
+....+.+++.+|++.+ .+++|||+. +|+.+=+.+. -.+|.|..+. . ...++|++++..++.++
T Consensus 181 ~p~~~~~~~~~~~~~~~---~~~~vGD~~~~Di~~a~~~G----~~~i~v~~G~~~~~~~~~~~~~pd~~~~sl~el~~~ 253 (257)
T TIGR01458 181 SKTFFLEALRATGCEPE---EAVMIGDDCRDDVGGAQDCG----MRGIQVRTGKYRPSDEEKINVPPDLTCDSLPHAVDL 253 (257)
T ss_pred CHHHHHHHHHHhCCChh---hEEEECCCcHHHHHHHHHcC----CeEEEECCCCCChHHhcccCCCCCEEECCHHHHHHH
Confidence 45577888899988764 899999996 8987766661 2466665432 1 13477899999998876
Q ss_pred H
Q 016649 373 L 373 (385)
Q Consensus 373 L 373 (385)
|
T Consensus 254 l 254 (257)
T TIGR01458 254 I 254 (257)
T ss_pred H
Confidence 5
No 58
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.17 E-value=0.0015 Score=61.55 Aligned_cols=59 Identities=22% Similarity=0.225 Sum_probs=41.8
Q ss_pred cHHHHHHHhcCCC-EEEEEecCCccCCCCCC-------CCcc----------------------cCCHHHHHHHHHHHhc
Q 016649 106 SFEQILKSAKGKR-IALFLDYDGTLSPIVDN-------PDCA----------------------FMSDAMRAVVKNVAKY 155 (385)
Q Consensus 106 ~~~~~~~~~~~k~-~li~lD~DGTL~~~~~~-------p~~~----------------------~is~~~~~aL~~L~~~ 155 (385)
+.++|.+-.++++ ..|+||+||||++..+. ++.. .+-+.+++.|+.+.++
T Consensus 50 ~~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~ 129 (237)
T TIGR01672 50 SVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRR 129 (237)
T ss_pred EHHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHC
Confidence 5789996555664 59999999999985430 1100 1111278889999988
Q ss_pred C-CEEEEcCC
Q 016649 156 F-PTAIISGR 164 (385)
Q Consensus 156 ~-~v~I~SGR 164 (385)
+ +++|+|+|
T Consensus 130 G~~i~iVTnr 139 (237)
T TIGR01672 130 GDAIFFVTGR 139 (237)
T ss_pred CCEEEEEeCC
Confidence 6 89999999
No 59
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=97.12 E-value=0.00036 Score=64.58 Aligned_cols=45 Identities=27% Similarity=0.256 Sum_probs=41.2
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS 351 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~ 351 (385)
+-.|..+++.+++.+|++.+ .++++|||.||.+||+.+ |++|++.
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~---~~~a~gDs~nDlpml~~a-----g~~ia~n 186 (212)
T COG0560 142 GEGKAKALRELAAELGIPLE---ETVAYGDSANDLPMLEAA-----GLPIAVN 186 (212)
T ss_pred cchHHHHHHHHHHHcCCCHH---HeEEEcCchhhHHHHHhC-----CCCeEeC
Confidence 45899999999999999865 899999999999999999 8899886
No 60
>PRK10444 UMP phosphatase; Provisional
Probab=97.11 E-value=0.00048 Score=65.26 Aligned_cols=49 Identities=10% Similarity=0.125 Sum_probs=41.1
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHh
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFV 173 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 173 (385)
++++||+||||... . .+.+.+.++|++|++.+ +++++|||+......+.
T Consensus 2 ~~v~~DlDGtL~~~-----~-~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~ 51 (248)
T PRK10444 2 KNVICDIDGVLMHD-----N-VAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLA 51 (248)
T ss_pred cEEEEeCCCceEeC-----C-eeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHH
Confidence 57899999999983 2 46789999999999986 99999999997665544
No 61
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.02 E-value=0.0031 Score=66.61 Aligned_cols=63 Identities=10% Similarity=0.199 Sum_probs=47.9
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC--CEEEEcCCChhHHHHHhC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF--PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~--~v~I~SGR~~~~l~~~~~ 174 (385)
+..+.+...+.+++..||+++.... -+..+-+.+.++|++|.+.+ +++|+||.+...+..+.+
T Consensus 356 ~~~~~~~g~~~~~v~~~~~~~g~i~--~~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~~i~~ 420 (556)
T TIGR01525 356 LNEGESQGKTVVFVAVDGELLGVIA--LRDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAEAVAA 420 (556)
T ss_pred HHHHhhCCcEEEEEEECCEEEEEEE--ecccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHHHHHH
Confidence 3455666678888899999887422 12347799999999998875 899999998887776653
No 62
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=96.88 E-value=0.001 Score=64.02 Aligned_cols=43 Identities=14% Similarity=0.162 Sum_probs=34.8
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChh
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRD 167 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~ 167 (385)
++|+||+||||... .. .-+.+.++|++|.+.+ +++++|||+..
T Consensus 3 ~~~~~D~DGtl~~~-----~~-~~~ga~e~l~~L~~~g~~~~~~Tnns~~ 46 (279)
T TIGR01452 3 QGFIFDCDGVLWLG-----ER-VVPGAPELLDRLARAGKAALFVTNNSTK 46 (279)
T ss_pred cEEEEeCCCceEcC-----Ce-eCcCHHHHHHHHHHCCCeEEEEeCCCCC
Confidence 57899999999883 22 3455999999999986 89999997743
No 63
>PLN02645 phosphoglycolate phosphatase
Probab=96.85 E-value=0.00096 Score=65.27 Aligned_cols=48 Identities=8% Similarity=0.070 Sum_probs=38.4
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHH
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYE 171 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 171 (385)
-++|+||+||||... . .+-+.+.++|++|++.+ +++++|+|+......
T Consensus 28 ~~~~~~D~DGtl~~~-----~-~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~ 76 (311)
T PLN02645 28 VETFIFDCDGVIWKG-----D-KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQ 76 (311)
T ss_pred CCEEEEeCcCCeEeC-----C-ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHH
Confidence 468999999999983 2 34578899999999987 899999999444333
No 64
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=96.79 E-value=0.00097 Score=59.55 Aligned_cols=48 Identities=25% Similarity=0.315 Sum_probs=37.2
Q ss_pred EEEEEecCCccCCC---CCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCCh
Q 016649 119 IALFLDYDGTLSPI---VDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSR 166 (385)
Q Consensus 119 ~li~lD~DGTL~~~---~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~ 166 (385)
+++|+|.||||... ...+++..+.+.+.++|++|.+.+ +++|+|..+.
T Consensus 2 ~~~~~D~Dgtl~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 2 KAIFLDRDGTINIDHGYVHEIDNFEFIDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CEEEEeCCCCEeCCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 68999999999942 222345556789999999999886 8999987664
No 65
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.66 E-value=0.014 Score=64.98 Aligned_cols=166 Identities=15% Similarity=0.164 Sum_probs=99.9
Q ss_pred HHHHhcCCCEEEEEecCC-----ccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCCcCceEEec
Q 016649 110 ILKSAKGKRIALFLDYDG-----TLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGLAELYYAGS 183 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DG-----TL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~~~l~~iae 183 (385)
+..+++...+++++=|++ |++.... -.-.+-+++.++|++|++.+ +++++||-.......+.+..++ ...
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~--l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA~~ia~~~Gi--~~~ 570 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVG--INDPPRPGVKEAVTTLITGGVRIIMITGDSQETAVSIARRLGM--PSK 570 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEe--ccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCC--CCC
Confidence 345666666777777766 4443211 01235689999999999986 9999999999988887642221 111
Q ss_pred CceeEeCCCCCCCCCCCcccccccCcCCCccccccccccccchHHHHHHHHHHhhhhccCcEEeccceeEEEEeccCChh
Q 016649 184 HGMDIMGPVRQSIPNDNADTIQSTGKQGKEVNLFQPAREFLPMIDAVFHSLMENTKEINGVKVENNKFCVSVHYRNVDEK 263 (385)
Q Consensus 184 nG~~I~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~~~~~~i~~v~~~l~~~~~~~~g~~iE~~~~~l~~~yr~~d~~ 263 (385)
++..+. | +++. ..+++
T Consensus 571 ~~~~v~---------------------g----------------~~l~---------------------------~~~~~ 586 (884)
T TIGR01522 571 TSQSVS---------------------G----------------EKLD---------------------------AMDDQ 586 (884)
T ss_pred CCceeE---------------------h----------------HHhH---------------------------hCCHH
Confidence 110000 0 0000 00111
Q ss_pred hHHHHHHHHHHHHHhCCCcEEEEecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCC
Q 016649 264 YWATVVQRVHEILKQYPTRLRLTHGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGN 343 (385)
Q Consensus 264 ~~~~l~~~v~~~l~~~~~~l~v~~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~ 343 (385)
++++.+++ ..+ +-.+.|. +|...++.+- ..| ..++++||+.||.+|++.+
T Consensus 587 -------~l~~~~~~----~~V-----far~~P~---~K~~iv~~lq-~~g------~~v~mvGDGvND~pAl~~A---- 636 (884)
T TIGR01522 587 -------QLSQIVPK----VAV-----FARASPE---HKMKIVKALQ-KRG------DVVAMTGDGVNDAPALKLA---- 636 (884)
T ss_pred -------HHHHHhhc----CeE-----EEECCHH---HHHHHHHHHH-HCC------CEEEEECCCcccHHHHHhC----
Confidence 11222222 222 2344566 7877766653 333 2799999999999999999
Q ss_pred CceEEEeeC-CCCC--ccceEEe--CChhHHHHHHH
Q 016649 344 HGYGILVSS-VPKE--SKAFYSL--RDPSEVMEFLK 374 (385)
Q Consensus 344 ~g~~V~v~n-~~~~--t~A~y~l--~~~~eV~~~L~ 374 (385)
+.||+||+ +..- ..|++++ ++...+..+++
T Consensus 637 -dVGia~g~~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 637 -DIGVAMGQTGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred -CeeEecCCCcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 69999984 3332 5789999 45777766553
No 66
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=96.49 E-value=0.0018 Score=59.41 Aligned_cols=63 Identities=29% Similarity=0.467 Sum_probs=49.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC-CccceEEeCCh--hHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK-ESKAFYSLRDP--SEVME 371 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~-~t~A~y~l~~~--~eV~~ 371 (385)
.|+..++.+++.++++.+ .+++|||+.+|..+.+.+ |++|+++..+. ...|+|++.+. .+++.
T Consensus 152 ~k~~~~~~~~~~~~~~~~---~~i~iGDs~~Di~aa~~a-----g~~i~~~~~~~~~~~a~~~i~~~~~~~~~~ 217 (219)
T TIGR00338 152 YKGKTLLILLRKEGISPE---NTVAVGDGANDLSMIKAA-----GLGIAFNAKPKLQQKADICINKKDLTDILP 217 (219)
T ss_pred ccHHHHHHHHHHcCCCHH---HEEEEECCHHHHHHHHhC-----CCeEEeCCCHHHHHhchhccCCCCHHHHHh
Confidence 489999999999998764 899999999999999998 78888853221 25789998744 55544
No 67
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=96.47 E-value=0.0066 Score=57.12 Aligned_cols=61 Identities=25% Similarity=0.255 Sum_probs=41.6
Q ss_pred CcHHHHHHHhcCC-CEEEEEecCCccCCCCC---CCC--------------------------cccCCHHHHHHHHHHHh
Q 016649 105 TSFEQILKSAKGK-RIALFLDYDGTLSPIVD---NPD--------------------------CAFMSDAMRAVVKNVAK 154 (385)
Q Consensus 105 ~~~~~~~~~~~~k-~~li~lD~DGTL~~~~~---~p~--------------------------~~~is~~~~~aL~~L~~ 154 (385)
=++++|.+-.+++ +..|++|+|||++.... .+. ...+-+.+++.|+.|.+
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvldnsp~~~~~~~~f~~~~~~y~~~~~fw~~y~~~~~~~a~p~~Ga~elL~~L~~ 128 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQKFWEKMNNGWDEFSIPKEVARQLIDMHVK 128 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCccccCCchheeeeeccCCCcccccChHHHHHHHHhcccccCcchHHHHHHHHHHHH
Confidence 3589999777777 55999999999995211 000 11123347888888877
Q ss_pred cC-CEEEEcCCC
Q 016649 155 YF-PTAIISGRS 165 (385)
Q Consensus 155 ~~-~v~I~SGR~ 165 (385)
++ +++++|||+
T Consensus 129 ~G~~I~iVTnR~ 140 (237)
T PRK11009 129 RGDSIYFITGRT 140 (237)
T ss_pred CCCeEEEEeCCC
Confidence 75 788888886
No 68
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.44 E-value=0.012 Score=51.89 Aligned_cols=62 Identities=18% Similarity=0.167 Sum_probs=51.3
Q ss_pred HhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCCcCc
Q 016649 113 SAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGLAEL 178 (385)
Q Consensus 113 ~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~~~l 178 (385)
..+-.-+-+++|+|.||+++ +....+|++++=+.++.+.+ .++|+|--+...+..+..-.++
T Consensus 23 L~~~Gikgvi~DlDNTLv~w----d~~~~tpe~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v 85 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPW----DNPDATPELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGV 85 (175)
T ss_pred HHHcCCcEEEEeccCceecc----cCCCCCHHHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCC
Confidence 44555678899999999998 34568999999999999996 8999999999999888753333
No 69
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=96.41 E-value=0.00029 Score=72.39 Aligned_cols=49 Identities=12% Similarity=0.146 Sum_probs=42.0
Q ss_pred ccccccch--------HHHHhcCCCcccccccc-cCcccCccccchhHhHHHHhCCCCCCcH
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKE-SNNEFSSTDTDVAYRTWQRQYPSALTSF 107 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~L~~~ 107 (385)
++++|||| |+.||+||++||+.|+. +.. .+..|+...|..+|..+|..-
T Consensus 397 ~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~----~v~~~dv~~W~~~fL~~L~~~ 454 (474)
T PRK10117 397 SALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLD----VIVKNDINHWQECFISDLKQI 454 (474)
T ss_pred CCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HhhhCCHHHHHHHHHHHHHHh
Confidence 48999999 88899999999998866 544 789999999999998777643
No 70
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=96.35 E-value=0.0042 Score=55.86 Aligned_cols=45 Identities=27% Similarity=0.277 Sum_probs=39.9
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeC
Q 016649 300 WDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSS 352 (385)
Q Consensus 300 ~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n 352 (385)
-+|+.+++.+++.+|++.+ .+++|||+.+|.+|++.+ |+++++..
T Consensus 146 ~~k~~~~~~~~~~~~~~~~---~~i~iGDs~~D~~~a~~a-----g~~~a~~~ 190 (201)
T TIGR01491 146 DNKGEAVERLKRELNPSLT---ETVAVGDSKNDLPMFEVA-----DISISLGD 190 (201)
T ss_pred ccHHHHHHHHHHHhCCCHH---HEEEEcCCHhHHHHHHhc-----CCeEEECC
Confidence 3799999999999998754 899999999999999999 78998854
No 71
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=96.30 E-value=0.0026 Score=56.20 Aligned_cols=44 Identities=25% Similarity=0.406 Sum_probs=31.3
Q ss_pred EEEEEecCCccCCCC------CCCCc-ccCCHHHHHHHHHHHhcC-CEEEEc
Q 016649 119 IALFLDYDGTLSPIV------DNPDC-AFMSDAMRAVVKNVAKYF-PTAIIS 162 (385)
Q Consensus 119 ~li~lD~DGTL~~~~------~~p~~-~~is~~~~~aL~~L~~~~-~v~I~S 162 (385)
++.+||+||||.... .+|++ ..+.+.+.++|++|.+.+ .++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALRELHKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHHHHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHHHhcCCeEEEEe
Confidence 468899999998631 23444 345678999999999987 788887
No 72
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=96.28 E-value=0.013 Score=52.06 Aligned_cols=55 Identities=20% Similarity=0.112 Sum_probs=43.4
Q ss_pred cCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCC-hhHHHHHh
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRS-RDKVYEFV 173 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~-~~~l~~~~ 173 (385)
+-.-+++++|+||||+.. ....+.+.+.++|+.|.+.+ +++|+|+.+ ...+..++
T Consensus 22 ~~~v~~vv~D~Dgtl~~~----~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~~~~~~~~~~ 78 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP----DHNEAYPALRDWIEELKAAGRKLLIVSNNAGEQRAKAVE 78 (170)
T ss_pred HCCCCEEEEecCCccccC----CCCCcChhHHHHHHHHHHcCCEEEEEeCCchHHHHHHHH
Confidence 345688999999999984 23467789999999999886 999999998 45444444
No 73
>PRK10671 copA copper exporting ATPase; Provisional
Probab=96.25 E-value=0.0045 Score=68.53 Aligned_cols=68 Identities=24% Similarity=0.213 Sum_probs=53.1
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEe--CChh
Q 016649 292 LEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSL--RDPS 367 (385)
Q Consensus 292 lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l--~~~~ 367 (385)
-++.|. +|..+++.+.+. . ..+++|||+.||.+|++.+ |+||+||++.+. ..|++++ ++.+
T Consensus 694 ~~~~p~---~K~~~i~~l~~~----~---~~v~~vGDg~nD~~al~~A-----gvgia~g~g~~~a~~~ad~vl~~~~~~ 758 (834)
T PRK10671 694 AGVLPD---GKAEAIKRLQSQ----G---RQVAMVGDGINDAPALAQA-----DVGIAMGGGSDVAIETAAITLMRHSLM 758 (834)
T ss_pred eCCCHH---HHHHHHHHHhhc----C---CEEEEEeCCHHHHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence 344555 588888876532 2 3799999999999999999 799999998754 4677776 5788
Q ss_pred HHHHHHH
Q 016649 368 EVMEFLK 374 (385)
Q Consensus 368 eV~~~L~ 374 (385)
++..+++
T Consensus 759 ~i~~~i~ 765 (834)
T PRK10671 759 GVADALA 765 (834)
T ss_pred HHHHHHH
Confidence 8888886
No 74
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=96.25 E-value=0.00049 Score=70.63 Aligned_cols=46 Identities=11% Similarity=0.155 Sum_probs=39.9
Q ss_pred cccccch--------HHHHhcCCCcccccccc-cCcccCccccchhHhHHHHhCCCCCC
Q 016649 56 DVRACSW--------LDAMKSSSPPPKWMAKE-SNNEFSSTDTDVAYRTWQRQYPSALT 105 (385)
Q Consensus 56 ~~~~n~w--------~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~L~ 105 (385)
+++|||| |+.||+||++||+.|++ +.. .+.+|+.+.|..+|...|.
T Consensus 424 AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~----~v~~~d~~~W~~~fl~~la 478 (486)
T COG0380 424 ALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLK----QVLTHDVARWANSFLDDLA 478 (486)
T ss_pred CEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHH----HHHhhhHHHHHHHHHHHHH
Confidence 7999999 88899999999999876 444 6899999999999876654
No 75
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=96.23 E-value=0.05 Score=59.67 Aligned_cols=68 Identities=29% Similarity=0.286 Sum_probs=51.1
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC--CccceEEeC--Ch
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK--ESKAFYSLR--DP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~--~t~A~y~l~--~~ 366 (385)
+-++.|. +|-.-++.+-+ .| .-|.++||+.||-++|+.+ ..||+|+++.+ ...|+.+|- +.
T Consensus 515 fAr~~Pe---~K~~iV~~lq~-~G------~~VamvGDGvNDapAL~~A-----dVGIAm~~gtdvAkeaADivLl~d~l 579 (755)
T TIGR01647 515 FAEVFPE---HKYEIVEILQK-RG------HLVGMTGDGVNDAPALKKA-----DVGIAVAGATDAARSAADIVLTEPGL 579 (755)
T ss_pred EEecCHH---HHHHHHHHHHh-cC------CEEEEEcCCcccHHHHHhC-----CeeEEecCCcHHHHHhCCEEEEcCCh
Confidence 4567788 89998888643 33 2699999999999999999 59999998765 357888883 44
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
..+...+
T Consensus 580 ~~I~~ai 586 (755)
T TIGR01647 580 SVIVDAI 586 (755)
T ss_pred HHHHHHH
Confidence 5444444
No 76
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=96.23 E-value=0.012 Score=56.92 Aligned_cols=58 Identities=21% Similarity=0.095 Sum_probs=46.1
Q ss_pred CCEEEEEecCCccCCCCCC----CC---cccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 117 KRIALFLDYDGTLSPIVDN----PD---CAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~----p~---~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+.+++++|+||||...... +. ...+.+.+.++|++|.+.+ +++|+|||+.......+.
T Consensus 157 ~~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 157 LPKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMYKAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHHHhCCCEEEEEeCCChhhHHHHHH
Confidence 4578889999999985431 11 3456789999999999986 899999999988877664
No 77
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=96.21 E-value=0.052 Score=61.40 Aligned_cols=59 Identities=22% Similarity=0.163 Sum_probs=45.6
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeC-CCC--CccceEEeCC
Q 016649 292 LEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSS-VPK--ESKAFYSLRD 365 (385)
Q Consensus 292 lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n-~~~--~t~A~y~l~~ 365 (385)
-.+.|. +|..-++.+- +.|. -+.++||+.||.+||+.+ ..||+||+ |.+ +..|++++.+
T Consensus 665 aR~sPe---qK~~IV~~lq-~~g~------vv~~~GDG~ND~paLk~A-----dVGiamg~~G~~vak~aADivL~d 726 (997)
T TIGR01106 665 ARTSPQ---QKLIIVEGCQ-RQGA------IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMILLD 726 (997)
T ss_pred EECCHH---HHHHHHHHHH-HCCC------EEEEECCCcccHHHHhhC-----CcceecCCcccHHHHHhhceEEec
Confidence 445577 8988877764 4442 689999999999999999 59999995 443 3678999854
No 78
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=96.20 E-value=0.011 Score=54.31 Aligned_cols=67 Identities=22% Similarity=0.260 Sum_probs=52.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCC--C----CccceEEeCChhHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVP--K----ESKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~--~----~t~A~y~l~~~~eV~~~L 373 (385)
.|..+++.+++.++++.. .+++|||+.+|..+.+.+ |+ +|.|..+. . ...+.|++++..++..+|
T Consensus 150 p~~~~~~~~~~~~~~~~~---~~i~igD~~~Di~~a~~~-----g~~~i~v~~g~~~~~~~~~~~~~~~i~~~~~l~~~l 221 (226)
T PRK13222 150 PDPAPLLLACEKLGLDPE---EMLFVGDSRNDIQAARAA-----GCPSVGVTYGYNYGEPIALSEPDVVIDHFAELLPLL 221 (226)
T ss_pred cChHHHHHHHHHcCCChh---heEEECCCHHHHHHHHHC-----CCcEEEECcCCCCccchhhcCCCEEECCHHHHHHHH
Confidence 457889999999998764 899999999999999998 44 56664332 1 236889999999999887
Q ss_pred HH
Q 016649 374 KS 375 (385)
Q Consensus 374 ~~ 375 (385)
++
T Consensus 222 ~~ 223 (226)
T PRK13222 222 GL 223 (226)
T ss_pred HH
Confidence 54
No 79
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=96.19 E-value=0.003 Score=55.70 Aligned_cols=41 Identities=32% Similarity=0.220 Sum_probs=35.6
Q ss_pred EcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 295 RPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 295 ~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
.+. +.+|+.+++.+++.++++.. .+++|||+.||.+|++.+
T Consensus 137 ~~~-~~~K~~~l~~~~~~~~~~~~---~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPE-GECKGKVLKELLEESKITLK---KIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCC-cchHHHHHHHHHHHhCCCHH---HEEEEeCCHHHHHHHhcC
Confidence 356 88999999999999888754 899999999999998863
No 80
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=96.10 E-value=0.063 Score=59.99 Aligned_cols=68 Identities=22% Similarity=0.240 Sum_probs=51.4
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC--CccceEEeC--Ch
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK--ESKAFYSLR--DP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~--~t~A~y~l~--~~ 366 (385)
+-.+.|. +|-.-|+.+-+ .| .-|..+||+.||-++++.+ ..||+||++.+ +..|+.+|- +.
T Consensus 618 fAr~sPe---~K~~IV~~Lq~-~G------~vVam~GDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLldd~~ 682 (902)
T PRK10517 618 FARLTPM---HKERIVTLLKR-EG------HVVGFMGDGINDAPALRAA-----DIGISVDGAVDIAREAADIILLEKSL 682 (902)
T ss_pred EEEcCHH---HHHHHHHHHHH-CC------CEEEEECCCcchHHHHHhC-----CEEEEeCCcCHHHHHhCCEEEecCCh
Confidence 4466788 89999888754 33 2699999999999999999 59999998765 368899884 44
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
..+.+.+
T Consensus 683 ~~I~~ai 689 (902)
T PRK10517 683 MVLEEGV 689 (902)
T ss_pred HHHHHHH
Confidence 4444433
No 81
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=96.07 E-value=0.044 Score=61.57 Aligned_cols=67 Identities=21% Similarity=0.277 Sum_probs=50.5
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee-CCCC--CccceEEeC--Ch
Q 016649 292 LEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS-SVPK--ESKAFYSLR--DP 366 (385)
Q Consensus 292 lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~-n~~~--~t~A~y~l~--~~ 366 (385)
-.+.|. +|..-|+.+-+ .|. .+.++||+.||.+|++.+ ..||+|| ++.+ ...|++++. +-
T Consensus 650 ar~sPe---~K~~iV~~lq~-~g~------vVam~GDGvNDapALk~A-----dVGIAmg~~gtdvAk~aADivL~dd~f 714 (941)
T TIGR01517 650 ARSSPL---DKQLLVLMLKD-MGE------VVAVTGDGTNDAPALKLA-----DVGFSMGISGTEVAKEASDIILLDDNF 714 (941)
T ss_pred EECCHH---HHHHHHHHHHH-CCC------EEEEECCCCchHHHHHhC-----CcceecCCCccHHHHHhCCEEEecCCH
Confidence 456788 89999888754 331 699999999999999999 4999998 6654 257899985 44
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
..+.+.+
T Consensus 715 ~~I~~~i 721 (941)
T TIGR01517 715 ASIVRAV 721 (941)
T ss_pred HHHHHHH
Confidence 5554444
No 82
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=96.05 E-value=0.0076 Score=52.58 Aligned_cols=59 Identities=25% Similarity=0.159 Sum_probs=40.8
Q ss_pred CCCEEEEEecCCccCCC----CCCC-CcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 116 GKRIALFLDYDGTLSPI----VDNP-DCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 116 ~k~~li~lD~DGTL~~~----~~~p-~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
.+-+|+++|.||||++- .++. .-+...-.-=..|+-|.+.+ +++|+|||.-.-++...+
T Consensus 6 ~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITGr~s~ive~Ra~ 70 (170)
T COG1778 6 KNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITGRDSPIVEKRAK 70 (170)
T ss_pred hhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeCCCCHHHHHHHH
Confidence 45689999999999982 1111 11112222334677888876 999999999999988775
No 83
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=96.03 E-value=0.008 Score=51.99 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=35.9
Q ss_pred EEEEecCCccCCCCCC-----CCcccCCHHHHHHHHHHHhcC-CEEEEcCCCh
Q 016649 120 ALFLDYDGTLSPIVDN-----PDCAFMSDAMRAVVKNVAKYF-PTAIISGRSR 166 (385)
Q Consensus 120 li~lD~DGTL~~~~~~-----p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~ 166 (385)
+++||+||||...... +....+-+.+.++|+.|.+.+ +++|+|+.+.
T Consensus 2 ~~~~d~dgtl~~~~~~~~~~~~~~~~~~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 2 ALFLDRDGVINEDTVSDYPRSLDDWQLRPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred eEEEeCCCceeccCCcccCCCHHHeEEcCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 6889999999985321 112235688999999999986 8999998763
No 84
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.00 E-value=0.021 Score=60.44 Aligned_cols=67 Identities=27% Similarity=0.285 Sum_probs=51.1
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEe--CChhH
Q 016649 293 EVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSL--RDPSE 368 (385)
Q Consensus 293 EI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l--~~~~e 368 (385)
++.|. +|...++.+.+. . ..++++||+.||.++++.+ |.||+|+++.+. ..|++++ ++..+
T Consensus 449 ~~~p~---~K~~~v~~l~~~----~---~~v~~VGDg~nD~~al~~A-----~vgia~g~g~~~a~~~Advvl~~~~l~~ 513 (562)
T TIGR01511 449 EVLPD---DKAALIKELQEK----G---RVVAMVGDGINDAPALAQA-----DVGIAIGAGTDVAIEAADVVLMRNDLND 513 (562)
T ss_pred cCChH---HHHHHHHHHHHc----C---CEEEEEeCCCccHHHHhhC-----CEEEEeCCcCHHHHhhCCEEEeCCCHHH
Confidence 44454 788888887652 2 3799999999999999998 799999976542 4689988 46777
Q ss_pred HHHHHH
Q 016649 369 VMEFLK 374 (385)
Q Consensus 369 V~~~L~ 374 (385)
+.++++
T Consensus 514 l~~~i~ 519 (562)
T TIGR01511 514 VATAID 519 (562)
T ss_pred HHHHHH
Confidence 776653
No 85
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=95.94 E-value=0.00079 Score=69.71 Aligned_cols=48 Identities=4% Similarity=0.093 Sum_probs=41.5
Q ss_pred ccccccch--------HHHHhcCCCcccccccc-cCcccCccccchhHhHHHHhCCCCCCc
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKE-SNNEFSSTDTDVAYRTWQRQYPSALTS 106 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~L~~ 106 (385)
++++|||| |+.||+|+++||+.|+. +.. ++..|+...|...|..+|..
T Consensus 426 ~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~l~~----~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 426 GALLTNPYDPVRMDETIYVALAMPKAEQQARMREMFD----AVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred CCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHhhCCHHHHHHHHHHHhhh
Confidence 48999999 88999999999998876 544 79999999999999877754
No 86
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.94 E-value=0.013 Score=61.20 Aligned_cols=52 Identities=19% Similarity=0.218 Sum_probs=39.7
Q ss_pred cCCCEEEEEecCCccCCCC------CCCCcc-cCCHHHHHHHHHHHhcC-CEEEEcCCCh
Q 016649 115 KGKRIALFLDYDGTLSPIV------DNPDCA-FMSDAMRAVVKNVAKYF-PTAIISGRSR 166 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~------~~p~~~-~is~~~~~aL~~L~~~~-~v~I~SGR~~ 166 (385)
+.+.+++|||+||||.... .+|++- .+.+.+.++|++|.+++ +++|+|..+-
T Consensus 165 ~~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L~~~Gy~IvIvTNQ~g 224 (526)
T TIGR01663 165 KGQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKELEADGFKICIFTNQGG 224 (526)
T ss_pred CccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHHHHCCCEEEEEECCcc
Confidence 5667999999999999632 122222 24688999999999996 8999998655
No 87
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=95.92 E-value=0.0069 Score=49.26 Aligned_cols=42 Identities=14% Similarity=0.164 Sum_probs=32.2
Q ss_pred EEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhH
Q 016649 121 LFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDK 168 (385)
Q Consensus 121 i~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 168 (385)
++||+||||... ..+-|...++|+.|++.+ +++++|-.+...
T Consensus 1 ~l~D~dGvl~~g------~~~ipga~e~l~~L~~~g~~~~~lTNns~~s 43 (101)
T PF13344_consen 1 FLFDLDGVLYNG------NEPIPGAVEALDALRERGKPVVFLTNNSSRS 43 (101)
T ss_dssp EEEESTTTSEET------TEE-TTHHHHHHHHHHTTSEEEEEES-SSS-
T ss_pred CEEeCccEeEeC------CCcCcCHHHHHHHHHHcCCCEEEEeCCCCCC
Confidence 689999999983 234578899999999997 899998766444
No 88
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=95.89 E-value=0.011 Score=62.25 Aligned_cols=62 Identities=27% Similarity=0.196 Sum_probs=48.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee-CCCCC--ccceEEe--CChhHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS-SVPKE--SKAFYSL--RDPSEVMEFLK 374 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~-n~~~~--t~A~y~l--~~~~eV~~~L~ 374 (385)
+|...++.+.+.. ..++++||+.||.++++.+ |.||++| ++.+. ..|++++ ++..++.++++
T Consensus 413 ~K~~~i~~l~~~~-------~~v~~vGDg~nD~~al~~A-----~vgia~g~~~~~~~~~~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 413 DKLEIVKELREKY-------GPVAMVGDGINDAPALAAA-----DVGIAMGASGSDVAIETADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred HHHHHHHHHHhcC-------CEEEEEeCCHHHHHHHHhC-----CEEEEeCCCccHHHHHhCCEEEECCCHHHHHHHHH
Confidence 7877777775432 2899999999999999998 7999998 55432 4789998 68888877654
No 89
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=95.88 E-value=0.015 Score=50.51 Aligned_cols=58 Identities=17% Similarity=0.161 Sum_probs=44.3
Q ss_pred CCEEEEEecCCccCCCCC-C--CC-cc-----------------cCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 117 KRIALFLDYDGTLSPIVD-N--PD-CA-----------------FMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~-~--p~-~~-----------------~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
++.++++|+||||+.-.. . +. .. .+-|.+.+.|+.|.+..+++|+|+.+...++..+.
T Consensus 1 ~k~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~~~~~l~I~Ts~~~~~~~~il~ 79 (148)
T smart00577 1 KKKTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRASELFELVVFTAGLRMYADPVLD 79 (148)
T ss_pred CCcEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHHhccEEEEEeCCcHHHHHHHHH
Confidence 467899999999998521 0 10 00 23578999999998667999999999999988775
No 90
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=95.87 E-value=0.093 Score=58.71 Aligned_cols=68 Identities=22% Similarity=0.249 Sum_probs=51.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC--CccceEEeC--Ch
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK--ESKAFYSLR--DP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~--~t~A~y~l~--~~ 366 (385)
+-.+.|. +|-.-|+.|-+. | ..|..+||+.||-++++.+ ..||+||++.+ +..|+.+|- +-
T Consensus 618 fAr~sPe---~K~~iV~~Lq~~-G------~vVamtGDGvNDaPALk~A-----DVGIAmg~gtdvAkeaADiVLldd~f 682 (903)
T PRK15122 618 FAKLTPL---QKSRVLKALQAN-G------HTVGFLGDGINDAPALRDA-----DVGISVDSGADIAKESADIILLEKSL 682 (903)
T ss_pred EEEeCHH---HHHHHHHHHHhC-C------CEEEEECCCchhHHHHHhC-----CEEEEeCcccHHHHHhcCEEEecCCh
Confidence 4567788 899998888643 3 2699999999999999999 59999997765 368999883 44
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
..+.+.+
T Consensus 683 ~~Iv~ai 689 (903)
T PRK15122 683 MVLEEGV 689 (903)
T ss_pred HHHHHHH
Confidence 4444443
No 91
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=95.85 E-value=0.013 Score=56.01 Aligned_cols=66 Identities=21% Similarity=0.176 Sum_probs=46.6
Q ss_pred CcHHHHHHHhcCCCEEEEEecCCccCCCC--------C-CC------------CcccCCHHHHHHHHHHHhcC-CEEEEc
Q 016649 105 TSFEQILKSAKGKRIALFLDYDGTLSPIV--------D-NP------------DCAFMSDAMRAVVKNVAKYF-PTAIIS 162 (385)
Q Consensus 105 ~~~~~~~~~~~~k~~li~lD~DGTL~~~~--------~-~p------------~~~~is~~~~~aL~~L~~~~-~v~I~S 162 (385)
..|++..+-.++++.+|+||+|+|++... . .| ....+-+.+.+.|+.|.+.+ +++|+|
T Consensus 62 ~~~~~~~~~~~~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVT 141 (266)
T TIGR01533 62 MRLDNNLKKVKDKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVS 141 (266)
T ss_pred HHHHHHHhccCCCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEe
Confidence 34555554446888999999999998632 1 01 12234578899999999886 999999
Q ss_pred CCChhHHH
Q 016649 163 GRSRDKVY 170 (385)
Q Consensus 163 GR~~~~l~ 170 (385)
+|+.....
T Consensus 142 nR~~~~~~ 149 (266)
T TIGR01533 142 NRSEKEKA 149 (266)
T ss_pred CCCcchHH
Confidence 99855443
No 92
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=95.85 E-value=0.01 Score=53.66 Aligned_cols=45 Identities=20% Similarity=0.093 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS 351 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~ 351 (385)
+-.|..+++.+++..+++.+ .++++||+.+|.+|++.+ |.+++|.
T Consensus 153 g~~K~~~l~~~~~~~~~~~~---~~~~~gDs~~D~~~~~~a-----~~~~~v~ 197 (202)
T TIGR01490 153 GEGKVHALAELLAEEQIDLK---DSYAYGDSISDLPLLSLV-----GHPYVVN 197 (202)
T ss_pred ChHHHHHHHHHHHHcCCCHH---HcEeeeCCcccHHHHHhC-----CCcEEeC
Confidence 56789999999999998754 899999999999999998 6788775
No 93
>PRK06769 hypothetical protein; Validated
Probab=95.85 E-value=0.0071 Score=53.94 Aligned_cols=49 Identities=16% Similarity=0.216 Sum_probs=37.4
Q ss_pred CCEEEEEecCCccCCCCC--CCCcccCCHHHHHHHHHHHhcC-CEEEEcCCC
Q 016649 117 KRIALFLDYDGTLSPIVD--NPDCAFMSDAMRAVVKNVAKYF-PTAIISGRS 165 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~--~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~ 165 (385)
.-++|++|.||||.+++. .++...+-+.++++|++|.+.+ +++|+|+.+
T Consensus 3 ~~~~~~~d~d~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~G~~l~I~Tn~~ 54 (173)
T PRK06769 3 NIQAIFIDRDGTIGGDTTIHYPGSFTLFPFTKASLQKLKANHIKIFSFTNQP 54 (173)
T ss_pred CCcEEEEeCCCcccCCCCCCCHHHeEECCCHHHHHHHHHHCCCEEEEEECCc
Confidence 357899999999987522 1223445689999999999886 899999865
No 94
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=95.82 E-value=0.032 Score=49.70 Aligned_cols=49 Identities=24% Similarity=0.240 Sum_probs=41.6
Q ss_pred HhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-C--EEEEcCCC
Q 016649 113 SAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-P--TAIISGRS 165 (385)
Q Consensus 113 ~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~--v~I~SGR~ 165 (385)
..+..-+.++||.|.||+++ ....++++..+.++++.+.+ . |+|+|-..
T Consensus 36 Lk~~Gik~li~DkDNTL~~~----~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 36 LKKKGIKALIFDKDNTLTPP----YEDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred hhhcCceEEEEcCCCCCCCC----CcCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 45667799999999999994 56789999999999999985 4 99999863
No 95
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=95.80 E-value=0.012 Score=55.26 Aligned_cols=47 Identities=17% Similarity=0.193 Sum_probs=38.0
Q ss_pred EEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEc---CCChhHHHHHh
Q 016649 121 LFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIIS---GRSRDKVYEFV 173 (385)
Q Consensus 121 i~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~S---GR~~~~l~~~~ 173 (385)
++||+||||... .. +.+.+.++|+.+.+.+ +++++| ||+...+.+.+
T Consensus 1 ~lfD~DGvL~~~-----~~-~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l 51 (236)
T TIGR01460 1 FLFDIDGVLWLG-----HK-PIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKL 51 (236)
T ss_pred CEEeCcCccCcC-----Cc-cCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHH
Confidence 478999999983 22 3458999999999886 899998 99999876654
No 96
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.75 E-value=0.015 Score=65.02 Aligned_cols=66 Identities=24% Similarity=0.317 Sum_probs=48.0
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeCC--hhH
Q 016649 293 EVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLRD--PSE 368 (385)
Q Consensus 293 EI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~~--~~e 368 (385)
.+.|. +|...++.+ +..| ..+.++||+.||.+|++.+ +.||+|+++... ..|+|++.+ ...
T Consensus 613 r~~P~---~K~~iV~~l-q~~g------~~va~iGDG~ND~~alk~A-----dVGia~g~g~~~ak~aAD~vl~dd~f~~ 677 (917)
T TIGR01116 613 RVEPS---HKSELVELL-QEQG------EIVAMTGDGVNDAPALKKA-----DIGIAMGSGTEVAKEASDMVLADDNFAT 677 (917)
T ss_pred ecCHH---HHHHHHHHH-HhcC------CeEEEecCCcchHHHHHhC-----CeeEECCCCcHHHHHhcCeEEccCCHHH
Confidence 34455 687777744 3332 2678899999999999999 799999987543 579999965 566
Q ss_pred HHHHH
Q 016649 369 VMEFL 373 (385)
Q Consensus 369 V~~~L 373 (385)
+.+.+
T Consensus 678 i~~~i 682 (917)
T TIGR01116 678 IVAAV 682 (917)
T ss_pred HHHHH
Confidence 65554
No 97
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=95.72 E-value=0.011 Score=63.60 Aligned_cols=67 Identities=22% Similarity=0.244 Sum_probs=52.0
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEe--CChh
Q 016649 292 LEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSL--RDPS 367 (385)
Q Consensus 292 lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l--~~~~ 367 (385)
-++.|. +|...++.+.+.. ..++++||+.||.++++.+ +.||+|+++.+. ..|++++ +++.
T Consensus 490 a~~~Pe---dK~~~v~~lq~~g-------~~VamvGDG~NDapAL~~A-----dvGiAm~~gt~~akeaadivLldd~~s 554 (675)
T TIGR01497 490 AEATPE---DKIALIRQEQAEG-------KLVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSDPT 554 (675)
T ss_pred cCCCHH---HHHHHHHHHHHcC-------CeEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEECCCCHH
Confidence 355566 7999998886542 1699999999999999999 799999987653 5788887 3566
Q ss_pred HHHHHH
Q 016649 368 EVMEFL 373 (385)
Q Consensus 368 eV~~~L 373 (385)
.+.+.+
T Consensus 555 ~Iv~av 560 (675)
T TIGR01497 555 KLIEVV 560 (675)
T ss_pred HHHHHH
Confidence 666655
No 98
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=95.72 E-value=0.0085 Score=52.96 Aligned_cols=48 Identities=17% Similarity=0.178 Sum_probs=34.8
Q ss_pred CEEEEEecCCccCCCCC------CCCcccCCHHHHHHHHHHHhcC-CEEEEcCCC
Q 016649 118 RIALFLDYDGTLSPIVD------NPDCAFMSDAMRAVVKNVAKYF-PTAIISGRS 165 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~------~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~ 165 (385)
++++|||.||||..... .+....+-+.+.++|++|.+++ +++|+|..+
T Consensus 1 ~~~~~~d~dg~l~~~~~~~~~~~~~~~~~~~pgv~e~L~~L~~~g~~l~IvSN~~ 55 (161)
T TIGR01261 1 QKILFIDRDGTLIEEPPSDFQVDALEKLRFEKGVIPALLKLKKAGYKFVMVTNQD 55 (161)
T ss_pred CCEEEEeCCCCccccCCCccccCCHHHeeECCCHHHHHHHHHHCCCeEEEEeCCc
Confidence 36789999999987321 1122344578999999999885 888888653
No 99
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=95.69 E-value=0.00073 Score=69.86 Aligned_cols=48 Identities=10% Similarity=0.226 Sum_probs=34.6
Q ss_pred Ccc--cccccch--------HHHHhcCCCcccccccc-cCcccCccccchhHhHHHHhCCCCC
Q 016649 53 VLD--DVRACSW--------LDAMKSSSPPPKWMAKE-SNNEFSSTDTDVAYRTWQRQYPSAL 104 (385)
Q Consensus 53 ~~~--~~~~n~w--------~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~L 104 (385)
.|. +++|||| |++||+|+++||+.++. +.. ++..++...|+.++.+.|
T Consensus 414 ~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~----~v~~~~~~~W~~~~l~~L 472 (474)
T PF00982_consen 414 QLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLRE----YVREHDVQWWAESFLRDL 472 (474)
T ss_dssp T-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHH----HHHHT-HHHHHHHHHHHH
T ss_pred HcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHH----HhHhCCHHHHHHHHHHHh
Confidence 455 3999999 88899999999998865 443 789999999998876544
No 100
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=95.64 E-value=0.012 Score=53.27 Aligned_cols=66 Identities=20% Similarity=0.182 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC--CccceE-EeCChhHHHHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK--ESKAFY-SLRDPSEVMEFLKSFV 377 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~--~t~A~y-~l~~~~eV~~~L~~L~ 377 (385)
.|..+++.+. ... ..+++|||+.||..|.+.+ |.||.++.... ...+.+ +++++.++.++|.+..
T Consensus 132 ~k~~~l~~~~----~~~---~~~v~iGDs~~D~~~~~aa-----~~~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~ 199 (205)
T PRK13582 132 GKRQAVKALK----SLG---YRVIAAGDSYNDTTMLGEA-----DAGILFRPPANVIAEFPQFPAVHTYDELLAAIDKAS 199 (205)
T ss_pred hHHHHHHHHH----HhC---CeEEEEeCCHHHHHHHHhC-----CCCEEECCCHHHHHhCCcccccCCHHHHHHHHHHHH
Confidence 5655555432 222 2799999999999999998 56776653221 124454 7899999999998876
Q ss_pred H
Q 016649 378 M 378 (385)
Q Consensus 378 ~ 378 (385)
.
T Consensus 200 ~ 200 (205)
T PRK13582 200 A 200 (205)
T ss_pred h
Confidence 4
No 101
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=95.63 E-value=1.1 Score=44.72 Aligned_cols=60 Identities=15% Similarity=-0.012 Sum_probs=43.0
Q ss_pred HHHHHhc-CCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHH
Q 016649 109 QILKSAK-GKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYE 171 (385)
Q Consensus 109 ~~~~~~~-~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 171 (385)
||.+..+ ++-+|+-||=|+||-..+. .-..+..++.-|-+|.+.+ .|+|+|.=.+....+
T Consensus 137 Qi~al~~~~~L~LvTFDgDvTLY~DG~---sl~~d~pvi~~ii~LL~~gv~VgIVTAAGY~~a~k 198 (408)
T PF06437_consen 137 QIMALAKNYGLKLVTFDGDVTLYEDGA---SLEPDNPVIPRIIKLLRRGVKVGIVTAAGYPGAEK 198 (408)
T ss_pred HHHHhcccCCceEEEEcCCcccccCCC---CCCCCchHHHHHHHHHhcCCeEEEEeCCCCCChHH
Confidence 5666665 4779999999999999643 1223556777777777775 999999877765443
No 102
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=95.58 E-value=0.011 Score=52.98 Aligned_cols=64 Identities=23% Similarity=0.242 Sum_probs=45.8
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCc-eEEEeeCCCC-----Cccc--eEEeCChhHHHHHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHG-YGILVSSVPK-----ESKA--FYSLRDPSEVMEFLK 374 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g-~~V~v~n~~~-----~t~A--~y~l~~~~eV~~~L~ 374 (385)
...+..+++.+|++.+ ++++|||+.+|..+-+.+ | .+|.+..+.. ...+ ++++.+..++.++|.
T Consensus 106 p~~~~~~~~~l~~~~~---~~~~VgDs~~Di~~A~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~ii~~l~el~~~l~ 177 (181)
T PRK08942 106 PGMLLSIAERLNIDLA---GSPMVGDSLRDLQAAAAA-----GVTPVLVRTGKGVTTLAEGAAPGTWVLDSLADLPQALK 177 (181)
T ss_pred HHHHHHHHHHcCCChh---hEEEEeCCHHHHHHHHHC-----CCeEEEEcCCCCchhhhcccCCCceeecCHHHHHHHHH
Confidence 4567888889998764 899999999998887776 4 3445543321 1235 788888888877664
No 103
>PLN02954 phosphoserine phosphatase
Probab=95.57 E-value=0.029 Score=51.56 Aligned_cols=67 Identities=25% Similarity=0.253 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCC-C---CccceEEeCChhHHHHHH
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVP-K---ESKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~-~---~t~A~y~l~~~~eV~~~L 373 (385)
+-.|..+++.+++.+|.. .+++|||+.+|..|-+.+. ..+.++.+... + ...|+|++++..++.++|
T Consensus 153 ~~~K~~~i~~~~~~~~~~-----~~i~iGDs~~Di~aa~~~~---~~~~~~~~~~~~~~~~~~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 153 SGGKAEAVQHIKKKHGYK-----TMVMIGDGATDLEARKPGG---ADLFIGYGGVQVREAVAAKADWFVTDFQDLIEVL 223 (224)
T ss_pred CccHHHHHHHHHHHcCCC-----ceEEEeCCHHHHHhhhcCC---CCEEEecCCCccCHHHHhcCCEEECCHHHHHHhh
Confidence 457999999999998853 6999999999999955531 12333333221 1 135899999999887765
No 104
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=95.50 E-value=0.017 Score=51.47 Aligned_cols=57 Identities=18% Similarity=0.060 Sum_probs=44.4
Q ss_pred CEEEEEecCCccCCC----CCC-CCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSPI----VDN-PDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~~----~~~-p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
-++++||+||+|++. ... ......+.+---+++.|++.+ +++|+|+++...+...+.
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L~~~Gi~laIiT~k~~~~~~~~l~ 69 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVLQLCGIDVAIITSKKSGAVRHRAE 69 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHHHHCCCEEEEEECCCcHHHHHHHH
Confidence 589999999999983 111 113344666777899999886 999999999999988875
No 105
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.42 E-value=0.12 Score=58.94 Aligned_cols=60 Identities=20% Similarity=0.302 Sum_probs=44.2
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCC---CCccceEEeCC
Q 016649 292 LEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVP---KESKAFYSLRD 365 (385)
Q Consensus 292 lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~---~~t~A~y~l~~ 365 (385)
-.+.|. .|+.-++.+-+..|. .++++|||.||.+|++.++ .||.+.... ....|+|++.+
T Consensus 749 aR~sP~---qK~~IV~~lk~~~~~------~vl~iGDG~ND~~mlk~Ad-----VGIgi~g~eg~qA~~aaD~~i~~ 811 (1057)
T TIGR01652 749 CRVSPS---QKADVVRLVKKSTGK------TTLAIGDGANDVSMIQEAD-----VGVGISGKEGMQAVMASDFAIGQ 811 (1057)
T ss_pred eCCCHH---HHHHHHHHHHhcCCC------eEEEEeCCCccHHHHhhcC-----eeeEecChHHHHHHHhhhhhhhh
Confidence 356688 999998888665441 6999999999999999994 666553211 12478888875
No 106
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=95.38 E-value=0.018 Score=57.36 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=39.2
Q ss_pred CCEEEEEecCCccCCCC------CCCCcccCCHHHHHHHHHHHhcC-CEEEEcCC
Q 016649 117 KRIALFLDYDGTLSPIV------DNPDCAFMSDAMRAVVKNVAKYF-PTAIISGR 164 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~------~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR 164 (385)
+++++|||.||||.... ..++...+-|.+.++|.+|.+.+ +++|+|+.
T Consensus 1 ~~k~l~lDrDgtl~~~~~~~y~~~~~~~~~l~pGV~e~L~~Lk~~G~kL~IvTNq 55 (354)
T PRK05446 1 MQKILFIDRDGTLIEEPPTDFQVDSLDKLAFEPGVIPALLKLQKAGYKLVMVTNQ 55 (354)
T ss_pred CCcEEEEeCCCCccCCCCccccccCcccceECcCHHHHHHHHHhCCCeEEEEECC
Confidence 47889999999999842 22345677889999999999885 99999985
No 107
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.36 E-value=0.023 Score=53.33 Aligned_cols=45 Identities=13% Similarity=0.089 Sum_probs=36.7
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhH
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDK 168 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 168 (385)
-++++||+||||... ..+.|.+.++|++|.+.+ +++|+|..+...
T Consensus 8 ~~~~~~D~dG~l~~~------~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 8 YDVFLLDLWGVIIDG------NHTYPGAVQNLNKIIAQGKPVYFVSNSPRNI 53 (242)
T ss_pred CCEEEEecccccccC------CccCccHHHHHHHHHHCCCEEEEEeCCCCCh
Confidence 457889999999973 345789999999999987 899988766654
No 108
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.26 E-value=0.13 Score=58.49 Aligned_cols=68 Identities=24% Similarity=0.242 Sum_probs=50.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCCccceEEeC--ChhH
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKESKAFYSLR--DPSE 368 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A~y~l~--~~~e 368 (385)
+--+.|. .|..-++.+-+ .|. .+..+|||-||.+|+|.| ..||+|+++...-+|++++. +-..
T Consensus 782 fAR~sP~---qK~~iV~~lq~-~g~------~V~m~GDG~ND~~ALK~A-----dVGIam~~~das~AA~f~l~~~~~~~ 846 (1054)
T TIGR01657 782 FARMAPD---QKETLVELLQK-LDY------TVGMCGDGANDCGALKQA-----DVGISLSEAEASVAAPFTSKLASISC 846 (1054)
T ss_pred EEecCHH---HHHHHHHHHHh-CCC------eEEEEeCChHHHHHHHhc-----CcceeeccccceeecccccCCCcHHH
Confidence 3456688 89998887653 442 699999999999999999 48999997644457888874 4455
Q ss_pred HHHHH
Q 016649 369 VMEFL 373 (385)
Q Consensus 369 V~~~L 373 (385)
|...+
T Consensus 847 I~~~I 851 (1054)
T TIGR01657 847 VPNVI 851 (1054)
T ss_pred HHHHH
Confidence 54444
No 109
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.11 E-value=0.029 Score=47.58 Aligned_cols=50 Identities=28% Similarity=0.416 Sum_probs=39.3
Q ss_pred eEEEEeCCCCCHHHHHHHHhCCCceEEEe-eC--CCCC--ccceEEeCChhHHHHHHHHH
Q 016649 322 LPIYVGDDRTDEDAFKELREGNHGYGILV-SS--VPKE--SKAFYSLRDPSEVMEFLKSF 376 (385)
Q Consensus 322 ~vi~~GD~~nDe~mfk~~~~~~~g~~V~v-~n--~~~~--t~A~y~l~~~~eV~~~L~~L 376 (385)
+++++||+-||+.|++.+ ..||++ ++ ++.. ..|++++.+..++++.+...
T Consensus 95 k~vmVGnGaND~laLr~A-----DlGI~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 95 KVVMVGNGANDILALREA-----DLGICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred EEEEecCCcchHHHhhhc-----ccceEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 899999999999999998 477755 33 2333 47899999999988877653
No 110
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=95.09 E-value=0.029 Score=60.67 Aligned_cols=69 Identities=29% Similarity=0.199 Sum_probs=55.3
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEe--CCh
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSL--RDP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l--~~~ 366 (385)
+=|+.|. +|...++.|-++- ..++.+||+.||-++|..+ ..||+||.+.+- ..|+.+| ++.
T Consensus 580 ~AellPe---dK~~~V~~l~~~g-------~~VamVGDGINDAPALA~A-----dVGiAmG~GtDvA~eaADvvL~~~dL 644 (713)
T COG2217 580 RAELLPE---DKAEIVRELQAEG-------RKVAMVGDGINDAPALAAA-----DVGIAMGSGTDVAIEAADVVLMRDDL 644 (713)
T ss_pred eccCCcH---HHHHHHHHHHhcC-------CEEEEEeCCchhHHHHhhc-----CeeEeecCCcHHHHHhCCEEEecCCH
Confidence 4577788 8888888887442 2799999999999999999 599999987753 5788888 467
Q ss_pred hHHHHHHH
Q 016649 367 SEVMEFLK 374 (385)
Q Consensus 367 ~eV~~~L~ 374 (385)
..|.+.++
T Consensus 645 ~~v~~ai~ 652 (713)
T COG2217 645 SAVPEAID 652 (713)
T ss_pred HHHHHHHH
Confidence 88777764
No 111
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=94.97 E-value=0.039 Score=52.84 Aligned_cols=68 Identities=21% Similarity=0.248 Sum_probs=52.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCC--C----CccceEEeCChhHHHH
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVP--K----ESKAFYSLRDPSEVME 371 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~--~----~t~A~y~l~~~~eV~~ 371 (385)
+-.+...++.+++.+|++.+ .+++|||+.+|+.+-+.+ |+ ++.|..+. . ...++|+++++.++.+
T Consensus 156 ~Kp~p~~~~~~~~~~g~~~~---~~l~IGD~~~Di~aA~~a-----Gi~~i~v~~G~~~~~~l~~~~~~~vi~~l~el~~ 227 (272)
T PRK13223 156 KKPDPAALLFVMKMAGVPPS---QSLFVGDSRSDVLAAKAA-----GVQCVALSYGYNHGRPIAEESPALVIDDLRALLP 227 (272)
T ss_pred CCCCcHHHHHHHHHhCCChh---HEEEECCCHHHHHHHHHC-----CCeEEEEecCCCCchhhhhcCCCEEECCHHHHHH
Confidence 44567889999999998765 899999999999998887 54 45554432 1 2468899999999886
Q ss_pred HHH
Q 016649 372 FLK 374 (385)
Q Consensus 372 ~L~ 374 (385)
+|.
T Consensus 228 ~~~ 230 (272)
T PRK13223 228 GCA 230 (272)
T ss_pred HHh
Confidence 654
No 112
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=94.97 E-value=0.036 Score=48.77 Aligned_cols=52 Identities=12% Similarity=0.103 Sum_probs=38.5
Q ss_pred EEEEecCCccCCCCC------CCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHH
Q 016649 120 ALFLDYDGTLSPIVD------NPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYE 171 (385)
Q Consensus 120 li~lD~DGTL~~~~~------~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 171 (385)
+|++|+||||+..+- --......+.+.+.++++++++ .++-+|+|+......
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp~~qa~~ 59 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARPIGQANR 59 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCcHHHHHH
Confidence 478999999998420 0011145678889999999998 899999999865543
No 113
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=94.86 E-value=0.031 Score=52.49 Aligned_cols=78 Identities=32% Similarity=0.410 Sum_probs=51.1
Q ss_pred EcCCCCCHHHHHHHHHHHc---CCCCCCCceEEEEeCCCCCHHHHHHHHhC-----CCceEE--EeeCCCCCccceEEe-
Q 016649 295 RPVIDWDKGKAVMFLLESL---GLNNCEDVLPIYVGDDRTDEDAFKELREG-----NHGYGI--LVSSVPKESKAFYSL- 363 (385)
Q Consensus 295 ~P~~g~nKG~Al~~Ll~~l---g~~~~~~~~vi~~GD~~nDe~mfk~~~~~-----~~g~~V--~v~n~~~~t~A~y~l- 363 (385)
-|. +.-||..++.+++.. |.+. ..++|||||.||.-.-..++.. ..||+. .+.+.+....|.-+.
T Consensus 145 C~~-NmCK~~il~~~~~~~~~~g~~~---~rviYiGDG~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~~~~~~~~a~v~~W 220 (234)
T PF06888_consen 145 CPP-NMCKGKILERLLQEQAQRGVPY---DRVIYIGDGRNDFCPALRLRPRDVVFPRKGYPLHKLIQKNPGEVKAEVVPW 220 (234)
T ss_pred CCC-ccchHHHHHHHHHHHhhcCCCc---ceEEEECCCCCCcCcccccCCCCEEecCCCChHHHHHhcCCCcceeEEEec
Confidence 366 788999999999884 4333 3899999999999776655431 013332 011111223555544
Q ss_pred CChhHHHHHHHHH
Q 016649 364 RDPSEVMEFLKSF 376 (385)
Q Consensus 364 ~~~~eV~~~L~~L 376 (385)
.+-.++.+.|+.|
T Consensus 221 ~~g~~i~~~l~~~ 233 (234)
T PF06888_consen 221 SSGEEILEILLQL 233 (234)
T ss_pred CCHHHHHHHHHhh
Confidence 6888999988876
No 114
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=94.81 E-value=0.041 Score=49.79 Aligned_cols=32 Identities=9% Similarity=0.058 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 143 DAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 143 ~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
|.+.+.|+.|.+..+++|+||.....+..++.
T Consensus 71 pg~~e~L~~L~~~~~~~IvS~~~~~~~~~~l~ 102 (205)
T PRK13582 71 PGAVEFLDWLRERFQVVILSDTFYEFAGPLMR 102 (205)
T ss_pred CCHHHHHHHHHhcCCEEEEeCCcHHHHHHHHH
Confidence 45677888887767899999999998888764
No 115
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=94.71 E-value=0.034 Score=60.81 Aligned_cols=66 Identities=27% Similarity=0.241 Sum_probs=50.1
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEe--CChh
Q 016649 292 LEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSL--RDPS 367 (385)
Q Consensus 292 lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l--~~~~ 367 (385)
.++.|. +|...++.+.+ . ..++++||+.||.++++.+ +.||+|+++... ..|++++ ++..
T Consensus 611 ~~~~p~---~K~~~v~~l~~----~----~~v~mvGDgiNDapAl~~A-----~vgia~g~~~~~a~~~adivl~~~~l~ 674 (741)
T PRK11033 611 AGLLPE---DKVKAVTELNQ----H----APLAMVGDGINDAPAMKAA-----SIGIAMGSGTDVALETADAALTHNRLR 674 (741)
T ss_pred cCCCHH---HHHHHHHHHhc----C----CCEEEEECCHHhHHHHHhC-----CeeEEecCCCHHHHHhCCEEEecCCHH
Confidence 345555 79998888742 1 1699999999999999998 699999987653 4688887 4667
Q ss_pred HHHHHH
Q 016649 368 EVMEFL 373 (385)
Q Consensus 368 eV~~~L 373 (385)
++..++
T Consensus 675 ~l~~~i 680 (741)
T PRK11033 675 GLAQMI 680 (741)
T ss_pred HHHHHH
Confidence 776555
No 116
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=94.69 E-value=0.034 Score=51.01 Aligned_cols=66 Identities=18% Similarity=0.128 Sum_probs=45.8
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC-ccceE--EeCChhHHHHHHHH
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE-SKAFY--SLRDPSEVMEFLKS 375 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~-t~A~y--~l~~~~eV~~~L~~ 375 (385)
+..|...++.+ +..|. .++++||+.||.+|++.+ |++|++.-.+.- ..|.- ++.+.+|+.+.+..
T Consensus 130 ~~~K~~~l~~l-~~~~~------~~v~vGDs~nDl~ml~~A-----g~~ia~~ak~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (203)
T TIGR02137 130 KDPKRQSVIAF-KSLYY------RVIAAGDSYNDTTMLSEA-----HAGILFHAPENVIREFPQFPAVHTYEDLKREFLK 197 (203)
T ss_pred cchHHHHHHHH-HhhCC------CEEEEeCCHHHHHHHHhC-----CCCEEecCCHHHHHhCCCCCcccCHHHHHHHHHH
Confidence 45899999888 45542 599999999999999999 799988622110 22222 23567777776654
Q ss_pred H
Q 016649 376 F 376 (385)
Q Consensus 376 L 376 (385)
.
T Consensus 198 ~ 198 (203)
T TIGR02137 198 A 198 (203)
T ss_pred H
Confidence 4
No 117
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=94.67 E-value=0.076 Score=49.67 Aligned_cols=54 Identities=17% Similarity=0.095 Sum_probs=41.3
Q ss_pred cCCCEEEEEecCCccCCCC---------CC------------CCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhH
Q 016649 115 KGKRIALFLDYDGTLSPIV---------DN------------PDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDK 168 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~---------~~------------p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 168 (385)
..++-+++||+|.|+++.. .. ...+..-+.++++++.|.+.+ .|+++|||+...
T Consensus 74 ~dg~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~ 149 (229)
T TIGR01675 74 GDGMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEEL 149 (229)
T ss_pred CCCCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHH
Confidence 3467889999999999721 00 113445688999999999986 899999999765
No 118
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=94.67 E-value=0.032 Score=48.63 Aligned_cols=56 Identities=18% Similarity=0.267 Sum_probs=40.7
Q ss_pred EEEEEecCCccCCCCCCCC--------------cccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 119 IALFLDYDGTLSPIVDNPD--------------CAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~--------------~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
++++||+||||+.....+. ...+-|.+.+.|+.+++...++|.|..+...+...+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l~~~~ev~i~T~~~~~ya~~v~~ 70 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEELSKHYEVVIWTSASEEYAEPVLD 70 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHHHHHCEEEEE-SS-HHHHHHHHH
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHHHHhceEEEEEeehhhhhhHHHH
Confidence 5789999999997543221 1124678999999998889999999999998888875
No 119
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=94.66 E-value=0.079 Score=49.10 Aligned_cols=47 Identities=23% Similarity=0.268 Sum_probs=35.9
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEe
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILV 350 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v 350 (385)
|--|.+-++-+++.-+++- -.+|+|||.+|.+||+.++.++ |.+|+-
T Consensus 189 gg~ka~i~e~~~ele~~d~----sa~~VGDSItDv~ml~~~rgrG-glAvaF 235 (315)
T COG4030 189 GGEKAKIMEGYCELEGIDF----SAVVVGDSITDVKMLEAARGRG-GLAVAF 235 (315)
T ss_pred CcchhHHHHHHHhhcCCCc----ceeEecCcccchHHHHHhhccC-ceEEEe
Confidence 4457777888888777653 4799999999999999998763 466643
No 120
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=94.63 E-value=0.069 Score=47.89 Aligned_cols=57 Identities=21% Similarity=0.202 Sum_probs=43.2
Q ss_pred CEEEEEecCCccCCCC-----------CCCC----------cccCCHHHHHHHHHHHhcC-CEEEEcCC-ChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSPIV-----------DNPD----------CAFMSDAMRAVVKNVAKYF-PTAIISGR-SRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~-----------~~p~----------~~~is~~~~~aL~~L~~~~-~v~I~SGR-~~~~l~~~~~ 174 (385)
.+|++||+|+||.... .++. ...+-+.+.++|+.|.+.+ +++|+|+. +...+..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~Lk~~G~~l~I~Sn~~~~~~~~~~L~ 81 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTLKDAGTYLATASWNDVPEWAYEILG 81 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHHHHCCCEEEEEeCCCChHHHHHHHH
Confidence 4789999999998621 1111 2344688999999999886 89999998 7877777765
No 121
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=94.54 E-value=0.1 Score=50.12 Aligned_cols=70 Identities=20% Similarity=0.335 Sum_probs=53.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCC--CC----CccceEEeCChhHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSV--PK----ESKAFYSLRDPSEVMEFLK 374 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~--~~----~t~A~y~l~~~~eV~~~L~ 374 (385)
.|..++..+++.++++.+ .+++|||+.+|+.+-+.+. -.+|.+..+ ++ ...|+|+++++.++..++.
T Consensus 196 ~k~~~~~~~l~~~~~~p~---~~l~IGDs~~Di~aA~~AG----~~~I~v~~g~~~~~~l~~~~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 196 SKRRALSQLVAREGWQPA---AVMYVGDETRDVEAARQVG----LIAVAVTWGFNDRQSLVAACPDWLLETPSDLLQAVT 268 (273)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEECCCHHHHHHHHHCC----CeEEEEecCCCCHHHHHHCCCCEEECCHHHHHHHHH
Confidence 467889999999998764 8999999999988877762 244545443 22 2468999999999999988
Q ss_pred HHH
Q 016649 375 SFV 377 (385)
Q Consensus 375 ~L~ 377 (385)
.|.
T Consensus 269 ~~~ 271 (273)
T PRK13225 269 QLM 271 (273)
T ss_pred HHh
Confidence 775
No 122
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=94.51 E-value=0.05 Score=50.12 Aligned_cols=69 Identities=19% Similarity=0.110 Sum_probs=47.1
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeC-C---CCCccceEEeCChhHHHHHHH
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSS-V---PKESKAFYSLRDPSEVMEFLK 374 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n-~---~~~t~A~y~l~~~~eV~~~L~ 374 (385)
|..|..+++.+ +.... .+++|||+.+|..|.+.+ |+.++-+. . .+...+.+..++-.+|.+.|+
T Consensus 146 ~~~K~~~l~~~----~~~~~---~~i~iGDs~~Di~aa~~A-----g~~~a~~~l~~~~~~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 146 GCCKPSLIRKL----SDTND---FHIVIGDSITDLEAAKQA-----DKVFARDFLITKCEELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred CCchHHHHHHh----ccCCC---CEEEEeCCHHHHHHHHHC-----CcceeHHHHHHHHHHcCCCccccCCHHHHHHHHH
Confidence 34588766554 44443 799999999999998877 56444211 0 122456666789999999998
Q ss_pred HHHHh
Q 016649 375 SFVMW 379 (385)
Q Consensus 375 ~L~~~ 379 (385)
++.+.
T Consensus 214 ~~~~~ 218 (219)
T PRK09552 214 HLLEV 218 (219)
T ss_pred HHhcc
Confidence 87654
No 123
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=94.50 E-value=0.033 Score=58.91 Aligned_cols=62 Identities=26% Similarity=0.304 Sum_probs=45.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeCChhHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLRDPSEVMEF 372 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~~~~eV~~~ 372 (385)
-|+..++.|-++-|. .+-||||+.||..|++.++ .|+|| +|+.-++ -+|+|++.--.-|.+.
T Consensus 768 QKA~v~~llq~~t~k------rvc~IGDGGNDVsMIq~A~---~GiGI-~gkEGkQASLAADfSItqF~Hv~rL 831 (1051)
T KOG0210|consen 768 QKAQVVRLLQKKTGK------RVCAIGDGGNDVSMIQAAD---VGIGI-VGKEGKQASLAADFSITQFSHVSRL 831 (1051)
T ss_pred HHHHHHHHHHHhhCc------eEEEEcCCCccchheeecc---cceee-ecccccccchhccccHHHHHHHHHH
Confidence 788887777777662 6999999999999999996 58888 5664443 4789987644444433
No 124
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.35 E-value=0.68 Score=53.30 Aligned_cols=66 Identities=17% Similarity=0.308 Sum_probs=45.0
Q ss_pred EEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC----CccceEEeCChhH
Q 016649 293 EVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK----ESKAFYSLRDPSE 368 (385)
Q Consensus 293 EI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~----~t~A~y~l~~~~e 368 (385)
-+.|. .|+.-++.+-+..+ ..++++|||.||.+|++.|+ .||.+. |.+ .-.|+|.+..
T Consensus 853 R~sP~---QKa~IV~~vk~~~~------~vtlaIGDGaNDv~mIq~Ad-----VGIGIs-G~EG~qA~~aSDfaI~~--- 914 (1178)
T PLN03190 853 RVAPL---QKAGIVALVKNRTS------DMTLAIGDGANDVSMIQMAD-----VGVGIS-GQEGRQAVMASDFAMGQ--- 914 (1178)
T ss_pred cCCHH---HHHHHHHHHHhcCC------cEEEEECCCcchHHHHHhcC-----eeeeec-CchhHHHHHhhccchhh---
Confidence 45688 89888887655432 16899999999999999994 555332 222 2477887744
Q ss_pred HHHHHHHHH
Q 016649 369 VMEFLKSFV 377 (385)
Q Consensus 369 V~~~L~~L~ 377 (385)
-++|++|+
T Consensus 915 -Fr~L~rLL 922 (1178)
T PLN03190 915 -FRFLVPLL 922 (1178)
T ss_pred -hHHHHHHH
Confidence 34566654
No 125
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=94.32 E-value=0.076 Score=48.50 Aligned_cols=67 Identities=24% Similarity=0.222 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCC--C----CccceEEeCChhHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVP--K----ESKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~--~----~t~A~y~l~~~~eV~~~L 373 (385)
-|...++++++.++++.+ .+++|||+.+|+.+-+.+ |+ +|.+..+. + +..|+|++++..++.+++
T Consensus 139 p~p~~~~~~~~~~~~~~~---~~~~iGDs~~Di~aa~~a-----G~~~i~v~~g~~~~~~l~~~~~~~~i~~~~~l~~~i 210 (214)
T PRK13288 139 PDPEPVLKALELLGAKPE---EALMVGDNHHDILAGKNA-----GTKTAGVAWTIKGREYLEQYKPDFMLDKMSDLLAIV 210 (214)
T ss_pred CCcHHHHHHHHHcCCCHH---HEEEECCCHHHHHHHHHC-----CCeEEEEcCCCCCHHHHhhcCcCEEECCHHHHHHHH
Confidence 567899999999998764 899999999999988887 43 44444332 1 135889999999998887
Q ss_pred HH
Q 016649 374 KS 375 (385)
Q Consensus 374 ~~ 375 (385)
.+
T Consensus 211 ~~ 212 (214)
T PRK13288 211 GD 212 (214)
T ss_pred hh
Confidence 65
No 126
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=94.28 E-value=0.092 Score=51.53 Aligned_cols=57 Identities=23% Similarity=0.203 Sum_probs=45.2
Q ss_pred CEEEEEecCCccCCCC--CC-CCc---ccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSPIV--DN-PDC---AFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~--~~-p~~---~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
.++|++|+|+||...+ ++ +.. ....+.+.++|++|.+.+ .++|+|..+...+...+.
T Consensus 3 ~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L~~~Gi~lai~S~n~~~~a~~~l~ 66 (320)
T TIGR01686 3 LKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTLKKQGFLLALASKNDEDDAKKVFE 66 (320)
T ss_pred eEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHHHhCCCEEEEEcCCCHHHHHHHHH
Confidence 6899999999999864 21 111 123478999999999987 899999999998888774
No 127
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=94.24 E-value=0.1 Score=47.30 Aligned_cols=66 Identities=18% Similarity=0.186 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCC--CC----CccceEEeCChhHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSV--PK----ESKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~--~~----~t~A~y~l~~~~eV~~~L 373 (385)
-|...+..+++.+|++.+ .+++|||+.+|..+-+.+ |+ +|.+.-+ .. +..|+|+++++.++..++
T Consensus 132 P~~~~~~~~~~~~~~~~~---~~l~igD~~~Di~aA~~~-----Gi~~i~~~~g~~~~~~l~~~~~~~~~~~~~~l~~~~ 203 (205)
T TIGR01454 132 PAPDIVREALRLLDVPPE---DAVMVGDAVTDLASARAA-----GTATVAALWGEGDAGELLAARPDFLLRKPQSLLALC 203 (205)
T ss_pred CChHHHHHHHHHcCCChh---heEEEcCCHHHHHHHHHc-----CCeEEEEEecCCChhhhhhcCCCeeeCCHHHHHHHh
Confidence 457888999999998765 899999999998887776 44 3333222 22 246899999999998776
Q ss_pred H
Q 016649 374 K 374 (385)
Q Consensus 374 ~ 374 (385)
+
T Consensus 204 ~ 204 (205)
T TIGR01454 204 R 204 (205)
T ss_pred h
Confidence 4
No 128
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=94.23 E-value=0.081 Score=48.40 Aligned_cols=33 Identities=18% Similarity=0.115 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 142 SDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 142 s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
.+.+.+.|+.|.+.+ +++|+||.....+..+++
T Consensus 87 ~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~~~l~ 120 (219)
T TIGR00338 87 TEGAEELVKTLKEKGYKVAVISGGFDLFAEHVKD 120 (219)
T ss_pred CCCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 456777778887775 788888888777666553
No 129
>PLN02954 phosphoserine phosphatase
Probab=94.13 E-value=0.088 Score=48.33 Aligned_cols=33 Identities=18% Similarity=0.203 Sum_probs=26.0
Q ss_pred CHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 142 SDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 142 s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
-+.+.+.|+.|.+.+ +++|+||.....+..++.
T Consensus 86 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~~l~ 119 (224)
T PLN02954 86 SPGIPELVKKLRARGTDVYLVSGGFRQMIAPVAA 119 (224)
T ss_pred CccHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 356777888887775 899999999888877664
No 130
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=94.08 E-value=0.087 Score=47.79 Aligned_cols=64 Identities=20% Similarity=0.241 Sum_probs=48.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEee--CCCC----CccceEEeCChhHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVS--SVPK----ESKAFYSLRDPSEVMEF 372 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~--n~~~----~t~A~y~l~~~~eV~~~ 372 (385)
-+..++..+++.+|++.+ .+++|||+.+|..+-+.+ |+ +|.+. .... ...|+|+++++.++..+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~~~igDs~~d~~aa~~a-----G~~~i~v~~g~~~~~~l~~~~a~~~i~~~~~l~~~ 212 (213)
T TIGR01449 142 PHPDPLLLAAERLGVAPQ---QMVYVGDSRVDIQAARAA-----GCPSVLLTYGYRYGEAIDLLPPDVLYDSLNELPPL 212 (213)
T ss_pred CChHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHC-----CCeEEEEccCCCCCcchhhcCCCeEeCCHHHHHhh
Confidence 346789999999998765 799999999999999888 43 34442 2211 24688999999887664
No 131
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=94.04 E-value=0.11 Score=47.95 Aligned_cols=68 Identities=24% Similarity=0.296 Sum_probs=50.7
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC----CccceEEeCChhHHHHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK----ESKAFYSLRDPSEVMEFLK 374 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~----~t~A~y~l~~~~eV~~~L~ 374 (385)
.-..+..+++.+|++. +.+++|||+.+|+.|=+.++- ...+|..|.... ...|++++.++.++..+|.
T Consensus 147 ~P~~l~~~~~~~~~~~---~~~l~VGDs~~Di~aA~~Ag~--~~v~v~~g~~~~~~l~~~~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 147 DPEPLLLLLEKLGLDP---EEALMVGDSLNDILAAKAAGV--PAVGVTWGYNSREELAQAGADVVIDSLAELLALLA 218 (220)
T ss_pred CHHHHHHHHHHhCCCh---hheEEECCCHHHHHHHHHcCC--CEEEEECCCCCCcchhhcCCCEEECCHHHHHHHHh
Confidence 3567888999999874 389999999999999988831 124455543211 2569999999999988875
No 132
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=93.87 E-value=0.11 Score=47.51 Aligned_cols=59 Identities=17% Similarity=0.077 Sum_probs=45.6
Q ss_pred CCCEEEEEecCCccCCCCC-C-CCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 116 GKRIALFLDYDGTLSPIVD-N-PDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 116 ~k~~li~lD~DGTL~~~~~-~-p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
..+++++||+||||+.... . +..-..-|.+.+-|+.+.+.+.|+|=|..+...+...+.
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~~feIvVwTAa~~~ya~~~l~ 79 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYEDYDIVIWSATSMKWIEIKMT 79 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHhCCEEEEEecCCHHHHHHHHH
Confidence 4458889999999997521 1 112234678999999999999999999999888887664
No 133
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=93.68 E-value=0.083 Score=57.05 Aligned_cols=68 Identities=21% Similarity=0.286 Sum_probs=51.7
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC--CccceEEe--CCh
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK--ESKAFYSL--RDP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~--~t~A~y~l--~~~ 366 (385)
+-+..|. +|-.-++.+-+. | ..|..+||+-||-++++.+ ..||+|+++.+ +..|+.++ +++
T Consensus 488 ~A~~~Pe---dK~~iV~~lQ~~-G------~~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~~ 552 (679)
T PRK01122 488 LAEATPE---DKLALIRQEQAE-G------RLVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAGNMVDLDSNP 552 (679)
T ss_pred EccCCHH---HHHHHHHHHHHc-C------CeEEEECCCcchHHHHHhC-----CEeEEeCCCCHHHHHhCCEEEeCCCH
Confidence 3456677 888888776543 2 2699999999999999999 59999998765 36788887 366
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
..+.+.+
T Consensus 553 s~Iv~av 559 (679)
T PRK01122 553 TKLIEVV 559 (679)
T ss_pred HHHHHHH
Confidence 6666655
No 134
>PTZ00445 p36-lilke protein; Provisional
Probab=93.63 E-value=0.12 Score=47.51 Aligned_cols=54 Identities=13% Similarity=0.170 Sum_probs=41.5
Q ss_pred HHhcCCCEEEEEecCCccCC-----CCCCCC------cccCCHHHHHHHHHHHhcC-CEEEEcCCCh
Q 016649 112 KSAKGKRIALFLDYDGTLSP-----IVDNPD------CAFMSDAMRAVVKNVAKYF-PTAIISGRSR 166 (385)
Q Consensus 112 ~~~~~k~~li~lD~DGTL~~-----~~~~p~------~~~is~~~~~aL~~L~~~~-~v~I~SGR~~ 166 (385)
.+.+..-++|++|+|-||+. +.. |+ -..++|+.+.-+++|.+.+ +|+|+|=.+.
T Consensus 37 ~L~~~GIk~Va~D~DnTlI~~HsgG~~~-~~~~~~~~~~~~tpefk~~~~~l~~~~I~v~VVTfSd~ 102 (219)
T PTZ00445 37 LLNECGIKVIASDFDLTMITKHSGGYID-PDNDDIRVLTSVTPDFKILGKRLKNSNIKISVVTFSDK 102 (219)
T ss_pred HHHHcCCeEEEecchhhhhhhhcccccC-CCcchhhhhccCCHHHHHHHHHHHHCCCeEEEEEccch
Confidence 57788899999999999998 422 21 1126899999999998875 9999985443
No 135
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=93.62 E-value=0.16 Score=47.19 Aligned_cols=64 Identities=19% Similarity=0.161 Sum_probs=48.0
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCC---C----CccceEEeCChhHHHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVP---K----ESKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~---~----~t~A~y~l~~~~eV~~~L 373 (385)
+...+.++++.+|++.+ .+++|||+.+|+.+-+.+ |+ +|.+.-+. . ...|+|+++++.++.+.|
T Consensus 153 ~p~~~~~~~~~l~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~~~~~~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 153 HPLPLLVAAERIGVAPT---DCVYVGDDERDILAARAA-----GMPSVAALWGYRLHDDDPLAWQADVLVEQPQLLWNPA 224 (229)
T ss_pred CHHHHHHHHHHhCCChh---hEEEeCCCHHHHHHHHHC-----CCcEEEEeecCCCCCcChhhcCCCeeeCCHHHHHHHh
Confidence 45678999999999765 899999999999998887 43 34443222 1 135889999999887655
No 136
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=93.62 E-value=0.16 Score=44.70 Aligned_cols=60 Identities=18% Similarity=0.299 Sum_probs=46.7
Q ss_pred cCCCEEEEEecCCccCCCCCCCCc------------------------------ccCCHHHHHHHHHHHhcCCEEEEcCC
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDC------------------------------AFMSDAMRAVVKNVAKYFPTAIISGR 164 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~------------------------------~~is~~~~~aL~~L~~~~~v~I~SGR 164 (385)
+.+|..+++|+|.||+.....|.. ..+-|.+.+.|++|++...++|+|..
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~~~yel~I~T~~ 82 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEASKLYEMHVYTMG 82 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHHhhcEEEEEeCC
Confidence 467889999999999984332210 11246889999999977899999999
Q ss_pred ChhHHHHHhC
Q 016649 165 SRDKVYEFVG 174 (385)
Q Consensus 165 ~~~~l~~~~~ 174 (385)
+...+...+.
T Consensus 83 ~~~yA~~vl~ 92 (156)
T TIGR02250 83 TRAYAQAIAK 92 (156)
T ss_pred cHHHHHHHHH
Confidence 9998888875
No 137
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=93.61 E-value=0.15 Score=45.13 Aligned_cols=37 Identities=35% Similarity=0.310 Sum_probs=30.5
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 296 PVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 296 P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+. |..|+..++.+++.. . ..+++|||+.||..+.+.+
T Consensus 145 ~~-g~~K~~~~~~~~~~~---~---~~~i~iGD~~~D~~aa~~~ 181 (188)
T TIGR01489 145 PC-GCCKGKVIHKLSEPK---Y---QHIIYIGDGVTDVCPAKLS 181 (188)
T ss_pred CC-CCCHHHHHHHHHhhc---C---ceEEEECCCcchhchHhcC
Confidence 45 788999999998764 2 2799999999999887765
No 138
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=93.47 E-value=0.14 Score=50.20 Aligned_cols=46 Identities=17% Similarity=0.174 Sum_probs=34.4
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc----C-CEEEEc---CCChhHHHH
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY----F-PTAIIS---GRSRDKVYE 171 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~----~-~v~I~S---GR~~~~l~~ 171 (385)
.++||+||||... ..+-+...++|+.|... + ++.++| |++...+.+
T Consensus 2 ~~ifD~DGvL~~g------~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~ 55 (321)
T TIGR01456 2 GFAFDIDGVLFRG------KKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAE 55 (321)
T ss_pred EEEEeCcCceECC------ccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHH
Confidence 5789999999983 23478999999999985 5 776665 666665433
No 139
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=93.40 E-value=0.24 Score=37.55 Aligned_cols=58 Identities=31% Similarity=0.269 Sum_probs=43.3
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC-CCCHHHHHHHHhCCCceEEEeeCCCC--C------ccceEEeCChhH
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGDD-RTDEDAFKELREGNHGYGILVSSVPK--E------SKAFYSLRDPSE 368 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD~-~nDe~mfk~~~~~~~g~~V~v~n~~~--~------t~A~y~l~~~~e 368 (385)
..++.+++.++++.+ .+++|||+ .+|+.+=+.+. -.+|.|..+.. + ..++|++++..|
T Consensus 8 ~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~a~~~G----~~~ilV~tG~~~~~~~~~~~~~pd~vv~~l~e 74 (75)
T PF13242_consen 8 GMLEQALKRLGVDPS---RCVMVGDSLETDIEAAKAAG----IDTILVLTGVYSPEDLEKAEHKPDYVVDDLKE 74 (75)
T ss_dssp HHHHHHHHHHTSGGG---GEEEEESSTTTHHHHHHHTT----SEEEEESSSSSCCCGHHHSSSTTSEEESSGGG
T ss_pred HHHHHHHHHcCCCHH---HEEEEcCCcHhHHHHHHHcC----CcEEEECCCCCCHHHHhccCCCCCEEECCHHh
Confidence 456888889988765 89999999 99998888772 35777766432 1 368888877654
No 140
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=93.26 E-value=0.12 Score=47.86 Aligned_cols=36 Identities=17% Similarity=0.037 Sum_probs=29.4
Q ss_pred ccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 139 AFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 139 ~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
..+.+.+.+.++.+++.+ +++|+||-.-..+..+..
T Consensus 76 ~~l~~ga~elv~~lk~~G~~v~iiSgg~~~lv~~ia~ 112 (212)
T COG0560 76 LRLTPGAEELVAALKAAGAKVVIISGGFTFLVEPIAE 112 (212)
T ss_pred CcCCccHHHHHHHHHHCCCEEEEEcCChHHHHHHHHH
Confidence 355777888999999987 999999999977776654
No 141
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=93.25 E-value=0.16 Score=44.83 Aligned_cols=57 Identities=18% Similarity=0.232 Sum_probs=44.3
Q ss_pred CEEEEEecCCccCCCCCCCCc-------------------ccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSPIVDNPDC-------------------AFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~-------------------~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
++.+++|+|+||+.....|.. -+.-|.+.+.|++|.+...++|.|..+...+..++.
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~yei~I~Ts~~~~yA~~il~ 76 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKWYELVIFTASLEEYADPVLD 76 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhcCEEEEEcCCcHHHHHHHHH
Confidence 457889999999975443311 024578999999999888999999999998888775
No 142
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=92.93 E-value=0.17 Score=56.33 Aligned_cols=68 Identities=19% Similarity=0.247 Sum_probs=50.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC--CccceEEeC--Ch
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK--ESKAFYSLR--DP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~--~t~A~y~l~--~~ 366 (385)
+-.+.|. +|-.-++.+-+ .| ..+.++||+.||.++++.+ ..||+|+++.+ +..|+.+|- +-
T Consensus 583 fAr~~Pe---~K~~iV~~lq~-~G------~vVam~GDGvNDapALk~A-----dVGIAmg~gtdvAk~aADiVLldd~~ 647 (867)
T TIGR01524 583 FARLTPM---QKSRIIGLLKK-AG------HTVGFLGDGINDAPALRKA-----DVGISVDTAADIAKEASDIILLEKSL 647 (867)
T ss_pred EEECCHH---HHHHHHHHHHh-CC------CEEEEECCCcccHHHHHhC-----CEEEEeCCccHHHHHhCCEEEecCCh
Confidence 4456677 88888887643 33 2699999999999999999 59999997765 367888883 44
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
..+...+
T Consensus 648 ~~I~~ai 654 (867)
T TIGR01524 648 MVLEEGV 654 (867)
T ss_pred HHHHHHH
Confidence 5554444
No 143
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.89 E-value=0.027 Score=52.70 Aligned_cols=56 Identities=18% Similarity=0.101 Sum_probs=40.7
Q ss_pred CCCEEEEEecCCccCCCCC------------CC---------CcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHH
Q 016649 116 GKRIALFLDYDGTLSPIVD------------NP---------DCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYE 171 (385)
Q Consensus 116 ~k~~li~lD~DGTL~~~~~------------~p---------~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 171 (385)
.++.+++||+|+||++... +| ..+..-|.+++.++.+.+.+ .|+++|||+-..-..
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~ 147 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREA 147 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHH
Confidence 6889999999999875110 01 11233456889999999997 999999999874433
No 144
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=92.88 E-value=0.11 Score=56.19 Aligned_cols=68 Identities=25% Similarity=0.303 Sum_probs=50.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEeC--Ch
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSLR--DP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l~--~~ 366 (385)
+-++.|. +|-..++.+-+. | ..|...||+.||-++++.+ ..||+|+++.+- ..|+.++- ++
T Consensus 484 ~A~~~Pe---dK~~iV~~lQ~~-G------~~VaMtGDGvNDAPALa~A-----DVGIAMgsGTdvAkeAADiVLldd~l 548 (673)
T PRK14010 484 VAECKPE---DKINVIREEQAK-G------HIVAMTGDGTNDAPALAEA-----NVGLAMNSGTMSAKEAANLIDLDSNP 548 (673)
T ss_pred EcCCCHH---HHHHHHHHHHhC-C------CEEEEECCChhhHHHHHhC-----CEEEEeCCCCHHHHHhCCEEEcCCCH
Confidence 3456666 787777776432 2 2689999999999999999 599999987753 67888883 56
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
.-+.+.+
T Consensus 549 s~Iv~av 555 (673)
T PRK14010 549 TKLMEVV 555 (673)
T ss_pred HHHHHHH
Confidence 6655554
No 145
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=92.87 E-value=0.18 Score=48.28 Aligned_cols=52 Identities=19% Similarity=0.184 Sum_probs=38.2
Q ss_pred CCEEEEEecCCccCC---------CCCCC------C-------cccCCHHHHHHHHHHHhcC-CEEEEcCCChhH
Q 016649 117 KRIALFLDYDGTLSP---------IVDNP------D-------CAFMSDAMRAVVKNVAKYF-PTAIISGRSRDK 168 (385)
Q Consensus 117 k~~li~lD~DGTL~~---------~~~~p------~-------~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~ 168 (385)
.+-+++||+|+|+++ .+..+ + ++..-+.+++..+.|.+.+ .|+++|||+-..
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhH
Confidence 457888999999994 11011 1 3344578999999999886 999999998654
No 146
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=92.82 E-value=0.11 Score=47.90 Aligned_cols=15 Identities=40% Similarity=0.802 Sum_probs=13.1
Q ss_pred CEEEEEecCCccCCC
Q 016649 118 RIALFLDYDGTLSPI 132 (385)
Q Consensus 118 ~~li~lD~DGTL~~~ 132 (385)
+++++||+||||+..
T Consensus 3 ~~~vifDfDgTi~~~ 17 (219)
T PRK09552 3 SIQIFCDFDGTITNN 17 (219)
T ss_pred CcEEEEcCCCCCCcc
Confidence 568999999999984
No 147
>PRK08238 hypothetical protein; Validated
Probab=92.77 E-value=0.24 Score=51.48 Aligned_cols=47 Identities=4% Similarity=-0.099 Sum_probs=36.2
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCCc--CceEEecCcee
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGLA--ELYYAGSHGMD 187 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~~--~l~~iaenG~~ 187 (385)
+.+++++.|+++++++ +++|+||.+...++.+.... -..++|.++..
T Consensus 73 ~~pga~e~L~~lk~~G~~v~LaTas~~~~a~~i~~~lGlFd~Vigsd~~~ 122 (479)
T PRK08238 73 YNEEVLDYLRAERAAGRKLVLATASDERLAQAVAAHLGLFDGVFASDGTT 122 (479)
T ss_pred CChhHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHcCCCCEEEeCCCcc
Confidence 4578999999999997 89999999999888776422 23567666543
No 148
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=92.65 E-value=0.15 Score=57.88 Aligned_cols=67 Identities=16% Similarity=0.193 Sum_probs=49.1
Q ss_pred EEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee-CCCC--CccceEEeC--Ch
Q 016649 292 LEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS-SVPK--ESKAFYSLR--DP 366 (385)
Q Consensus 292 lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~-n~~~--~t~A~y~l~--~~ 366 (385)
-.+.|. +|..-++.+-+. | ..+.++||+.||.+|++.+ ..||+|| ++.. +..|++++. +-
T Consensus 727 ar~sP~---~K~~iV~~lq~~-g------~~Vam~GDGvNDapaLk~A-----dVGIAmg~~gt~vak~aADivl~dd~f 791 (1053)
T TIGR01523 727 ARCAPQ---TKVKMIEALHRR-K------AFCAMTGDGVNDSPSLKMA-----NVGIAMGINGSDVAKDASDIVLSDDNF 791 (1053)
T ss_pred EecCHH---HHHHHHHHHHhc-C------CeeEEeCCCcchHHHHHhC-----CccEecCCCccHHHHHhcCEEEecCCH
Confidence 455566 888888877643 3 1688999999999999999 5999998 5554 358899985 34
Q ss_pred hHHHHHH
Q 016649 367 SEVMEFL 373 (385)
Q Consensus 367 ~eV~~~L 373 (385)
..+...+
T Consensus 792 ~~I~~~i 798 (1053)
T TIGR01523 792 ASILNAI 798 (1053)
T ss_pred HHHHHHH
Confidence 5555444
No 149
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=92.61 E-value=0.14 Score=49.15 Aligned_cols=50 Identities=20% Similarity=0.197 Sum_probs=37.3
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcC---CChhHHHHHh
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISG---RSRDKVYEFV 173 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG---R~~~~l~~~~ 173 (385)
...++||+||||... ...-|...++|++|++++ +++++|- |+++.+.+.+
T Consensus 8 y~~~l~DlDGvl~~G------~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L 61 (269)
T COG0647 8 YDGFLFDLDGVLYRG------NEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARL 61 (269)
T ss_pred cCEEEEcCcCceEeC------CccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHH
Confidence 356899999999983 234589999999999996 8888875 4445344433
No 150
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=92.46 E-value=0.12 Score=45.91 Aligned_cols=33 Identities=24% Similarity=0.251 Sum_probs=27.0
Q ss_pred CHHHHHHHH---HHHcCCCCCCCceEEEEeCCCCCHHHHH
Q 016649 301 DKGKAVMFL---LESLGLNNCEDVLPIYVGDDRTDEDAFK 337 (385)
Q Consensus 301 nKG~Al~~L---l~~lg~~~~~~~~vi~~GD~~nDe~mfk 337 (385)
+|..+++.+ ... +.... .++++||+.||.+|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~---~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPD---RVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCC---EEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCC---eEEEEECCHHHHHHhC
Confidence 599999999 443 44443 8999999999999986
No 151
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=92.25 E-value=0.17 Score=46.45 Aligned_cols=66 Identities=21% Similarity=0.126 Sum_probs=43.9
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCC----CCCccceEEeCChhHHHHHHHH
Q 016649 300 WDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSV----PKESKAFYSLRDPSEVMEFLKS 375 (385)
Q Consensus 300 ~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~----~~~t~A~y~l~~~~eV~~~L~~ 375 (385)
..|..+++.+.. .. ..+++|||+.||..|.+.+ ++.++-+.- .+...+.+..++-.+|.+.|++
T Consensus 143 ~~K~~~l~~~~~----~~---~~~i~iGDg~~D~~~a~~A-----d~~~ar~~l~~~~~~~~~~~~~~~~f~di~~~l~~ 210 (214)
T TIGR03333 143 CCKPSLIRKLSE----PN---DYHIVIGDSVTDVEAAKQS-----DLCFARDYLLNECEELGLNHAPFQDFYDVRKELEN 210 (214)
T ss_pred CCHHHHHHHHhh----cC---CcEEEEeCCHHHHHHHHhC-----CeeEehHHHHHHHHHcCCCccCcCCHHHHHHHHHH
Confidence 458888887642 22 2789999999999998887 565543211 1123344445788889888876
Q ss_pred HH
Q 016649 376 FV 377 (385)
Q Consensus 376 L~ 377 (385)
..
T Consensus 211 ~~ 212 (214)
T TIGR03333 211 VK 212 (214)
T ss_pred Hh
Confidence 53
No 152
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=91.88 E-value=0.21 Score=45.81 Aligned_cols=35 Identities=11% Similarity=0.038 Sum_probs=28.1
Q ss_pred cCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 140 FMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 140 ~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
.+.|.+.+.|+.+.+.++++|+||-....+..++.
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~~il~ 102 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQPLMR 102 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHHHHHH
Confidence 34667778888888777999999999988887764
No 153
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=91.84 E-value=0.26 Score=45.22 Aligned_cols=62 Identities=16% Similarity=0.076 Sum_probs=45.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCCC-----CccceEEeCChhHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVPK-----ESKAFYSLRDPSEVM 370 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~~-----~t~A~y~l~~~~eV~ 370 (385)
.+...++.+++.+|++.+ .+++|||+.+|..+-+.+ |+ +|.+..... ...|++++.+.+++.
T Consensus 149 p~~~~~~~~~~~~~~~~~---~~~~igDs~~Di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~~~dl~ 216 (222)
T PRK10826 149 PHPEVYLNCAAKLGVDPL---TCVALEDSFNGMIAAKAA-----RMRSIVVPAPEQQNDPRWALADVKLESLTELT 216 (222)
T ss_pred CCHHHHHHHHHHcCCCHH---HeEEEcCChhhHHHHHHc-----CCEEEEecCCccCchhhhhhhheeccCHHHHh
Confidence 456789999999999764 899999999999999888 53 444543221 135777777777653
No 154
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=91.66 E-value=0.56 Score=44.49 Aligned_cols=72 Identities=10% Similarity=-0.008 Sum_probs=51.4
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC--------------------------
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK-------------------------- 355 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~-------------------------- 355 (385)
+...+..+++.+|+.. +..+++|||+.+|+.+=+.+. -.+|.|..+..
T Consensus 160 ~p~~~~~a~~~l~~~~--~~e~l~IGDs~~Di~aA~~aG----~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (267)
T PRK13478 160 YPWMALKNAIELGVYD--VAACVKVDDTVPGIEEGLNAG----MWTVGVILSGNELGLSEEEYQALSAAELAARRERARA 233 (267)
T ss_pred ChHHHHHHHHHcCCCC--CcceEEEcCcHHHHHHHHHCC----CEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHH
Confidence 3567889999999852 137999999999987776662 23445543321
Q ss_pred ---CccceEEeCChhHHHHHHHHHHHh
Q 016649 356 ---ESKAFYSLRDPSEVMEFLKSFVMW 379 (385)
Q Consensus 356 ---~t~A~y~l~~~~eV~~~L~~L~~~ 379 (385)
+..|+++++++.++.++|+.+...
T Consensus 234 ~l~~~~a~~vi~~~~~l~~~l~~~~~~ 260 (267)
T PRK13478 234 RLRAAGAHYVIDTIADLPAVIADIEAR 260 (267)
T ss_pred HHHHcCCCeehhhHHHHHHHHHHHHHH
Confidence 245889999999999998776543
No 155
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=91.63 E-value=1.2 Score=48.64 Aligned_cols=56 Identities=27% Similarity=0.270 Sum_probs=44.4
Q ss_pred EEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee-CCCC--CccceEEeC
Q 016649 294 VRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS-SVPK--ESKAFYSLR 364 (385)
Q Consensus 294 I~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~-n~~~--~t~A~y~l~ 364 (385)
+.|+ .|-+-++.|-+. | +.+..-||+.||-++||.+ .+||+|| +|.. +++|+-+|.
T Consensus 661 ~~P~---HK~kIVeaLq~~-g------eivAMTGDGVNDApALK~A-----dIGIAMG~~GTdVaKeAsDMVL~ 719 (972)
T KOG0202|consen 661 AEPQ---HKLKIVEALQSR-G------EVVAMTGDGVNDAPALKKA-----DIGIAMGISGTDVAKEASDMVLA 719 (972)
T ss_pred cCch---hHHHHHHHHHhc-C------CEEEecCCCccchhhhhhc-----ccceeecCCccHhhHhhhhcEEe
Confidence 3477 888888776543 2 3788899999999999999 4999999 7765 478888885
No 156
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=91.49 E-value=0.21 Score=44.62 Aligned_cols=57 Identities=18% Similarity=0.161 Sum_probs=32.0
Q ss_pred CEEEEEecCCccCCCC-----CCC---------------CcccCCHHHHHHHHHHHhcC-CEEEEcCCC-hhHHHHHhC
Q 016649 118 RIALFLDYDGTLSPIV-----DNP---------------DCAFMSDAMRAVVKNVAKYF-PTAIISGRS-RDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~-----~~p---------------~~~~is~~~~~aL~~L~~~~-~v~I~SGR~-~~~l~~~~~ 174 (385)
.+||+||+|+||.+.- ..| ..-.+-+.+.++|++|.+.+ ++++||--+ ++..++.++
T Consensus 3 PklvvFDLD~TlW~~~~~~~~~~Pf~~~~~~~~v~D~~g~~v~lypdv~~iL~~L~~~gv~lavASRt~~P~~A~~~L~ 81 (169)
T PF12689_consen 3 PKLVVFDLDYTLWPPWMDTHVGPPFKKISNGNVVVDSRGEEVSLYPDVPEILQELKERGVKLAVASRTDEPDWARELLK 81 (169)
T ss_dssp -SEEEE-STTTSSSS-TTTSS-S-EEE-TTS--EEETT--EE---TTHHHHHHHHHHCT--EEEEE--S-HHHHHHHHH
T ss_pred CcEEEEcCcCCCCchhHhhccCCCceecCCCCEEEeCCCCEEEeCcCHHHHHHHHHHCCCEEEEEECCCChHHHHHHHH
Confidence 4789999999999821 101 11223567888888888876 788888433 344444444
No 157
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=91.48 E-value=0.14 Score=46.02 Aligned_cols=33 Identities=24% Similarity=0.304 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+.+..+++.++++.. .++++||+.||..|++.+
T Consensus 182 k~~~~~i~~l~~~~~---~v~~vGDg~nD~~al~~A 214 (215)
T PF00702_consen 182 KIFLRIIKELQVKPG---EVAMVGDGVNDAPALKAA 214 (215)
T ss_dssp HHHHHHHHHHTCTGG---GEEEEESSGGHHHHHHHS
T ss_pred hhHHHHHHHHhcCCC---EEEEEccCHHHHHHHHhC
Confidence 366888999987654 899999999999999986
No 158
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=91.03 E-value=0.28 Score=45.03 Aligned_cols=34 Identities=24% Similarity=0.302 Sum_probs=25.9
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+.+.+.+.|+.|.+.+ +++|+||.....++.++.
T Consensus 71 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~~il~ 105 (214)
T TIGR03333 71 IREGFREFVAFINEHGIPFYVISGGMDFFVYPLLE 105 (214)
T ss_pred ccccHHHHHHHHHHCCCeEEEECCCcHHHHHHHHH
Confidence 3456667777787775 899999998888887764
No 159
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=90.74 E-value=0.77 Score=40.86 Aligned_cols=48 Identities=21% Similarity=0.234 Sum_probs=35.4
Q ss_pred CEEEEEecCCccCCCCC----CCCcccCCHHHHHHHHHHHhcC-CEEEEcCCC
Q 016649 118 RIALFLDYDGTLSPIVD----NPDCAFMSDAMRAVVKNVAKYF-PTAIISGRS 165 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~----~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~ 165 (385)
.|+++||.||||.-... ......+-+.+.++|++|.+.+ +++|+|+.+
T Consensus 3 ~~~~~~d~~~t~~~~~~~~~~~~~~~~~~pgv~e~L~~Lk~~g~~l~I~Tn~~ 55 (181)
T PRK08942 3 MKAIFLDRDGVINVDSDGYVKSPDEWIPIPGSIEAIARLKQAGYRVVVATNQS 55 (181)
T ss_pred ccEEEEECCCCcccCCccccCCHHHeEECCCHHHHHHHHHHCCCEEEEEeCCc
Confidence 47899999999975431 1123334678899999999885 888888765
No 160
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=89.83 E-value=0.28 Score=44.18 Aligned_cols=46 Identities=20% Similarity=0.200 Sum_probs=34.1
Q ss_pred CEEEEEecCCccCCCCC----CCCcccCCHHHHHHHHHHHhcC-CEEEEcC
Q 016649 118 RIALFLDYDGTLSPIVD----NPDCAFMSDAMRAVVKNVAKYF-PTAIISG 163 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~----~p~~~~is~~~~~aL~~L~~~~-~v~I~SG 163 (385)
.+++|+|-||||--..+ .+++-..-+.++++|..|.+.+ .++|+|-
T Consensus 5 ~k~lflDRDGtin~d~~~yv~~~~~~~~~~g~i~al~~l~~~gy~lVvvTN 55 (181)
T COG0241 5 QKALFLDRDGTINIDKGDYVDSLDDFQFIPGVIPALLKLQRAGYKLVVVTN 55 (181)
T ss_pred CcEEEEcCCCceecCCCcccCcHHHhccCccHHHHHHHHHhCCCeEEEEEC
Confidence 67899999999986322 2223345678899999998876 7888774
No 161
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=89.28 E-value=0.25 Score=43.86 Aligned_cols=36 Identities=8% Similarity=0.038 Sum_probs=29.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
-+-..++.+++.+|++.+ .+++|||+..|..+=+.+
T Consensus 143 P~p~~~~~~~~~~~~~~~---~~l~igDs~~di~aA~~a 178 (188)
T PRK10725 143 PAPDTFLRCAQLMGVQPT---QCVVFEDADFGIQAARAA 178 (188)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeccHhhHHHHHHC
Confidence 456779999999998754 899999999998776665
No 162
>PRK06769 hypothetical protein; Validated
Probab=88.65 E-value=0.7 Score=41.06 Aligned_cols=64 Identities=19% Similarity=0.193 Sum_probs=44.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCc-eEEEeeCCCC------------CccceEEeCChhH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHG-YGILVSSVPK------------ESKAFYSLRDPSE 368 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g-~~V~v~n~~~------------~t~A~y~l~~~~e 368 (385)
+......+++.++++.+ ++++|||+.+|..+=+.+ | .+|.+..+.. ...+.|++.++.+
T Consensus 95 ~p~~~~~~~~~l~~~p~---~~i~IGD~~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~l~~~~~~~~~~~~~e 166 (173)
T PRK06769 95 STGMLLQAAEKHGLDLT---QCAVIGDRWTDIVAAAKV-----NATTILVRTGAGYDALHTYRDKWAHIEPNYIAENFED 166 (173)
T ss_pred CHHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHC-----CCeEEEEecCCCchhhhhhhcccccCCCcchhhCHHH
Confidence 34567888888988664 899999999888776665 4 4555544321 1246777778887
Q ss_pred HHHHH
Q 016649 369 VMEFL 373 (385)
Q Consensus 369 V~~~L 373 (385)
+.++|
T Consensus 167 l~~~l 171 (173)
T PRK06769 167 AVNWI 171 (173)
T ss_pred HHHHH
Confidence 77654
No 163
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=88.55 E-value=1 Score=40.95 Aligned_cols=65 Identities=18% Similarity=0.296 Sum_probs=46.1
Q ss_pred CHHHHHHHHHHHc-CCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCce-EEEeeCC--C--CCccceEEeCChhHHHHHH
Q 016649 301 DKGKAVMFLLESL-GLNNCEDVLPIYVGDDR-TDEDAFKELREGNHGY-GILVSSV--P--KESKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 301 nKG~Al~~Ll~~l-g~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g~-~V~v~n~--~--~~t~A~y~l~~~~eV~~~L 373 (385)
-+....+.+++.+ |++.+ .+++|||+. +|..+=+.+ |+ +|.+..+ + ....+.|++.++.++..+|
T Consensus 153 P~~~~~~~~~~~~~~~~~~---~~v~igD~~~~di~~A~~~-----G~~~i~~~~~~~~~~~~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 153 PDKEIFNYALERMPKFSKE---EVLMIGDSLTADIKGGQNA-----GLDTCWMNPDMHPNPDDIIPTYEIRSLEELYEIL 224 (224)
T ss_pred CCHHHHHHHHHHhcCCCch---heEEECCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCceEECCHHHHHhhC
Confidence 3456788999999 98765 899999997 798876666 43 3444322 1 1246778899998887654
No 164
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=88.02 E-value=0.86 Score=41.57 Aligned_cols=65 Identities=17% Similarity=0.132 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHcCCC-CCCCceEEEEeCCCCCHHHHHHHHhCCCceE--EEeeCCCC------CccceEEeCChhHHHH
Q 016649 301 DKGKAVMFLLESLGLN-NCEDVLPIYVGDDRTDEDAFKELREGNHGYG--ILVSSVPK------ESKAFYSLRDPSEVME 371 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~-~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~--V~v~n~~~------~t~A~y~l~~~~eV~~ 371 (385)
-+...+..+++.+|+. .+ .+++|||+.+|..+=+.+ |+. |.+..+.. ...|.+++++..++..
T Consensus 146 P~p~~~~~a~~~~~~~~~~---~~~~igD~~~Di~aa~~a-----G~~~~i~~~~g~~~~~~~~~~~~~~~i~~~~~l~~ 217 (220)
T TIGR03351 146 PAPDLILRAMELTGVQDVQ---SVAVAGDTPNDLEAGINA-----GAGAVVGVLTGAHDAEELSRHPHTHVLDSVADLPA 217 (220)
T ss_pred CCHHHHHHHHHHcCCCChh---HeEEeCCCHHHHHHHHHC-----CCCeEEEEecCCCcHHHHhhcCCceeecCHHHHHH
Confidence 3568899999999986 33 899999999998887776 554 34443321 2357888888887766
Q ss_pred HH
Q 016649 372 FL 373 (385)
Q Consensus 372 ~L 373 (385)
.+
T Consensus 218 ~~ 219 (220)
T TIGR03351 218 LL 219 (220)
T ss_pred hh
Confidence 54
No 165
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=87.96 E-value=0.86 Score=42.20 Aligned_cols=67 Identities=15% Similarity=0.197 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce--EEEeeCCCC--CccceEEeCChhHHHHHHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY--GILVSSVPK--ESKAFYSLRDPSEVMEFLKSF 376 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~--~V~v~n~~~--~t~A~y~l~~~~eV~~~L~~L 376 (385)
+....+.+++.+|++.+ .+++|||+.+|..+=+.+ |+ .+.|.+... +..+...+.+.+++.++|+.|
T Consensus 151 ~p~~~~~~~~~~~~~p~---~~l~igDs~~di~aA~~a-----G~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~l 221 (224)
T PRK14988 151 DQRLWQAVAEHTGLKAE---RTLFIDDSEPILDAAAQF-----GIRYCLGVTNPDSGIAEKQYQRHPSLNDYRRLIPSL 221 (224)
T ss_pred CHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHc-----CCeEEEEEeCCCCCccchhccCCCcHHHHHHHhhhh
Confidence 36778999999999765 899999999886554444 55 345665332 234555566777777777765
No 166
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=87.71 E-value=1.2 Score=41.74 Aligned_cols=64 Identities=16% Similarity=0.159 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHcCCC-CCCCceEEEEeCCCCCHHHHHHHHhCCCc-eEEEeeCCCC------------------------
Q 016649 302 KGKAVMFLLESLGLN-NCEDVLPIYVGDDRTDEDAFKELREGNHG-YGILVSSVPK------------------------ 355 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~-~~~~~~vi~~GD~~nDe~mfk~~~~~~~g-~~V~v~n~~~------------------------ 355 (385)
+.......++.+|+. .+ .+++|||+.+|+.+=+.+ | .+|.|..+..
T Consensus 158 ~p~~~~~a~~~l~~~~~~---~~l~IGDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 229 (253)
T TIGR01422 158 APWMALKNAIELGVYDVA---ACVKVGDTVPDIEEGRNA-----GMWTVGLILSSNELGLSEEEYRALDPAELEARRAEA 229 (253)
T ss_pred CHHHHHHHHHHcCCCCch---heEEECCcHHHHHHHHHC-----CCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHH
Confidence 356778889999984 43 899999999998777666 4 4555544321
Q ss_pred -----CccceEEeCChhHHHHHH
Q 016649 356 -----ESKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 356 -----~t~A~y~l~~~~eV~~~L 373 (385)
+..|+++++++.++..+|
T Consensus 230 ~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 230 TARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHhcCCCEehhcHHHHHHhh
Confidence 135888899988877654
No 167
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=87.67 E-value=0.63 Score=41.01 Aligned_cols=15 Identities=27% Similarity=0.634 Sum_probs=12.9
Q ss_pred CEEEEEecCCccCCC
Q 016649 118 RIALFLDYDGTLSPI 132 (385)
Q Consensus 118 ~~li~lD~DGTL~~~ 132 (385)
+.+++||+||||+++
T Consensus 1 ~~~iiFD~dgTL~~~ 15 (188)
T TIGR01489 1 KVVVVSDFDGTITLN 15 (188)
T ss_pred CeEEEEeCCCcccCC
Confidence 468899999999985
No 168
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=87.48 E-value=0.37 Score=43.46 Aligned_cols=34 Identities=21% Similarity=0.211 Sum_probs=27.6
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKEL 339 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~ 339 (385)
....+++++.+|++.+ .+++|||+. +|+.+=+.+
T Consensus 163 ~~~~~~~~~~~~~~~~---~~~~IgD~~~~Di~~A~~a 197 (203)
T TIGR02252 163 PKIFQEALERAGISPE---EALHIGDSLRNDYQGARAA 197 (203)
T ss_pred HHHHHHHHHHcCCChh---HEEEECCCchHHHHHHHHc
Confidence 4568999999998765 899999997 898776655
No 169
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=87.42 E-value=0.35 Score=44.05 Aligned_cols=15 Identities=33% Similarity=0.454 Sum_probs=13.0
Q ss_pred CEEEEEecCCccCCC
Q 016649 118 RIALFLDYDGTLSPI 132 (385)
Q Consensus 118 ~~li~lD~DGTL~~~ 132 (385)
.++|+||+||||++.
T Consensus 3 ~~~viFD~DGTL~ds 17 (214)
T PRK13288 3 INTVLFDLDGTLINT 17 (214)
T ss_pred ccEEEEeCCCcCccC
Confidence 468999999999983
No 170
>PRK11587 putative phosphatase; Provisional
Probab=87.39 E-value=0.32 Score=44.58 Aligned_cols=60 Identities=17% Similarity=0.053 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCc-eEEEeeCCCC---CccceEEeCChhHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHG-YGILVSSVPK---ESKAFYSLRDPSEV 369 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g-~~V~v~n~~~---~t~A~y~l~~~~eV 369 (385)
+.......++.+|++++ ++++|||+.+|+.+=+.+ | .+|.+.++.. ...+++++++..++
T Consensus 140 ~p~~~~~~~~~~g~~p~---~~l~igDs~~di~aA~~a-----G~~~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLLGLAPQ---ECVVVEDAPAGVLSGLAA-----GCHVIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHcCCCcc---cEEEEecchhhhHHHHHC-----CCEEEEECCCCchhhhccCCEEecchhhe
Confidence 46777888899999765 899999999997765555 4 4667755432 24678888877664
No 171
>PRK11590 hypothetical protein; Provisional
Probab=87.33 E-value=0.33 Score=44.52 Aligned_cols=42 Identities=14% Similarity=-0.035 Sum_probs=30.2
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS 351 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~ 351 (385)
|-.|-..++..+ |.+. ....+.|||.||.+||+.+ +.+++|.
T Consensus 161 g~~K~~~l~~~~---~~~~---~~~~aY~Ds~~D~pmL~~a-----~~~~~vn 202 (211)
T PRK11590 161 GHEKVAQLERKI---GTPL---RLYSGYSDSKQDNPLLYFC-----QHRWRVT 202 (211)
T ss_pred ChHHHHHHHHHh---CCCc---ceEEEecCCcccHHHHHhC-----CCCEEEC
Confidence 445555555444 5332 3678999999999999999 6788875
No 172
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=87.24 E-value=0.3 Score=43.97 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAF 336 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mf 336 (385)
+-..+..+++.+|++.+ .+++|||+.+|..+=
T Consensus 163 ~p~~~~~~~~~~~~~~~---~~i~vGD~~~Di~aA 194 (197)
T TIGR01548 163 NPEPLILAAKALGVEAC---HAAMVGDTVDDIITG 194 (197)
T ss_pred CHHHHHHHHHHhCcCcc---cEEEEeCCHHHHHHH
Confidence 35667888999998765 899999999987653
No 173
>PRK11590 hypothetical protein; Provisional
Probab=87.19 E-value=0.7 Score=42.31 Aligned_cols=15 Identities=47% Similarity=0.811 Sum_probs=13.5
Q ss_pred CCEEEEEecCCccCC
Q 016649 117 KRIALFLDYDGTLSP 131 (385)
Q Consensus 117 k~~li~lD~DGTL~~ 131 (385)
++++++||+||||+.
T Consensus 5 ~~k~~iFD~DGTL~~ 19 (211)
T PRK11590 5 ERRVVFFDLDGTLHQ 19 (211)
T ss_pred cceEEEEecCCCCcc
Confidence 678999999999995
No 174
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=87.15 E-value=1.7 Score=43.74 Aligned_cols=73 Identities=16% Similarity=0.105 Sum_probs=53.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCC---CccceEEeCChhHH-HHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPK---ESKAFYSLRDPSEV-MEFLKSF 376 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~---~t~A~y~l~~~~eV-~~~L~~L 376 (385)
-+.......++.+|+..+ .+++|||+.+|+.+=+.++ -..|.+..+.. ...|++++++..++ ...|+.|
T Consensus 273 P~Peifl~A~~~lgl~Pe---ecl~IGDS~~DIeAAk~AG----m~~IgV~~~~~~~~l~~Ad~iI~s~~EL~~~~l~~l 345 (381)
T PLN02575 273 PDPEMFIYAAQLLNFIPE---RCIVFGNSNQTVEAAHDAR----MKCVAVASKHPIYELGAADLVVRRLDELSIVDLKNL 345 (381)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHcC----CEEEEECCCCChhHhcCCCEEECCHHHHHHHHHhhh
Confidence 356788999999998765 8999999999977766662 24555554322 13588999999997 5677777
Q ss_pred HHhh
Q 016649 377 VMWK 380 (385)
Q Consensus 377 ~~~~ 380 (385)
+...
T Consensus 346 ~~~~ 349 (381)
T PLN02575 346 ADIE 349 (381)
T ss_pred hhcC
Confidence 7554
No 175
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=86.94 E-value=0.73 Score=51.79 Aligned_cols=60 Identities=27% Similarity=0.267 Sum_probs=45.2
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeC-CCCC--ccceEEeC
Q 016649 290 KVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSS-VPKE--SKAFYSLR 364 (385)
Q Consensus 290 ~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n-~~~~--t~A~y~l~ 364 (385)
-+-.+.|. +|..-++.|-+. |. .+.+.||+-||.+|+|.| ..||+|+. |.+. ..|+.++.
T Consensus 618 VfARvsP~---qK~~IV~~lq~~-g~------vVamtGDGvNDapALk~A-----DVGIamg~~Gtdaak~Aadivl~ 680 (917)
T COG0474 618 VFARVSPE---QKARIVEALQKS-GH------VVAMTGDGVNDAPALKAA-----DVGIAMGGEGTDAAKEAADIVLL 680 (917)
T ss_pred EEEEcCHH---HHHHHHHHHHhC-CC------EEEEeCCCchhHHHHHhc-----CccEEecccHHHHHHhhcceEee
Confidence 35567777 888887776654 42 799999999999999999 48998874 4442 46777764
No 176
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=86.91 E-value=3 Score=40.14 Aligned_cols=61 Identities=15% Similarity=0.075 Sum_probs=45.9
Q ss_pred HHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 112 KSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 112 ~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
++--..+-+|++|+|.||..... +.....+.+.+.|.+|.+.+ .+++=|-.+++-+..-+.
T Consensus 116 ~~~~~~phVIVfDlD~TLItd~~--~v~Ir~~~v~~sL~~Lk~~g~vLvLWSyG~~eHV~~sl~ 177 (297)
T PF05152_consen 116 SLVWEPPHVIVFDLDSTLITDEG--DVRIRDPAVYDSLRELKEQGCVLVLWSYGNREHVRHSLK 177 (297)
T ss_pred hccCCCCcEEEEECCCcccccCC--ccccCChHHHHHHHHHHHcCCEEEEecCCCHHHHHHHHH
Confidence 44455677999999999998432 11233678999999999998 778888888888877663
No 177
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=86.84 E-value=0.89 Score=41.41 Aligned_cols=60 Identities=22% Similarity=0.253 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCc-eEEEeeCCCC-------CccceEEeCChhHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHG-YGILVSSVPK-------ESKAFYSLRDPSEV 369 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g-~~V~v~n~~~-------~t~A~y~l~~~~eV 369 (385)
+....+.+++.+|++.+ .+++|||+. +|..+=+.+ | .+|.+..+.. ...+.|++.++.++
T Consensus 152 ~~~~~~~~~~~~~~~~~---~~~~igDs~~~di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~el 220 (221)
T TIGR02253 152 HPKIFYAALKRLGVKPE---EAVMVGDRLDKDIKGAKNL-----GMKTVWINQGKSSKMEDDVYPYPDYEISSLREL 220 (221)
T ss_pred CHHHHHHHHHHcCCChh---hEEEECCChHHHHHHHHHC-----CCEEEEECCCCCcccccccccCCCeeeCcHHhh
Confidence 35678999999998765 899999997 898877776 4 3555654322 12456777766553
No 178
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=86.16 E-value=0.44 Score=44.83 Aligned_cols=60 Identities=15% Similarity=0.111 Sum_probs=43.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCc-eEEEeeCCCC-----CccceEEeCChhH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHG-YGILVSSVPK-----ESKAFYSLRDPSE 368 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g-~~V~v~n~~~-----~t~A~y~l~~~~e 368 (385)
-+.......++.+|++.+ .+++|||+..|+.+=+.+ | ..|.+..+.. ...|+|++.+..+
T Consensus 165 P~p~~~~~a~~~~~~~~~---~~l~vgDs~~Di~aA~~a-----Gi~~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 165 PHPDPYLKALEVLKVSKD---HTFVFEDSVSGIKAGVAA-----GMPVVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred CChHHHHHHHHHhCCChh---HEEEEcCCHHHHHHHHHC-----CCEEEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 445778999999998764 899999999998776665 4 3444543221 2468899998877
No 179
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=85.90 E-value=1.4 Score=48.52 Aligned_cols=69 Identities=23% Similarity=0.220 Sum_probs=52.2
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEEe--CCh
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYSL--RDP 366 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~l--~~~ 366 (385)
+-|+.|. .|..-++.|-+.-+ -++.+||+.||-++|..+ ..||+++.+..- ..|+.+| ++-
T Consensus 766 ~aev~P~---~K~~~Ik~lq~~~~-------~VaMVGDGINDaPALA~A-----dVGIaig~gs~vAieaADIVLmrn~L 830 (951)
T KOG0207|consen 766 YAEVLPE---QKAEKIKEIQKNGG-------PVAMVGDGINDAPALAQA-----DVGIAIGAGSDVAIEAADIVLMRNDL 830 (951)
T ss_pred EeccCch---hhHHHHHHHHhcCC-------cEEEEeCCCCccHHHHhh-----ccceeeccccHHHHhhCCEEEEccch
Confidence 5677787 78888887765532 599999999999999999 489999887542 5788887 455
Q ss_pred hHHHHHHH
Q 016649 367 SEVMEFLK 374 (385)
Q Consensus 367 ~eV~~~L~ 374 (385)
.+|...++
T Consensus 831 ~~v~~ai~ 838 (951)
T KOG0207|consen 831 RDVPFAID 838 (951)
T ss_pred hhhHHHHH
Confidence 66655554
No 180
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=85.85 E-value=0.12 Score=53.44 Aligned_cols=47 Identities=6% Similarity=0.103 Sum_probs=38.7
Q ss_pred ccccccch--------HHHHhcCCCcccccccc-cCcccCccccchhHhHHHHhCCCCCC
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKE-SNNEFSSTDTDVAYRTWQRQYPSALT 105 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~L~ 105 (385)
.+++|||| |..+|+|+++||+.++. +.. ++..++...|+.+|..+|.
T Consensus 400 ~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~----~v~~~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 400 GALLVNPYDIDGMADAIARALTMPLEEREERHRAMMD----KLRKNDVQRWREDFLSDLN 455 (456)
T ss_pred CcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHhhCCHHHHHHHHHHHhh
Confidence 57999999 78899999999988865 443 6788999999998876654
No 181
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=85.81 E-value=0.9 Score=41.81 Aligned_cols=42 Identities=17% Similarity=-0.014 Sum_probs=30.4
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS 351 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~ 351 (385)
|-.|-..++..+ +.+. ....+.|||.||.+||+.+ +.+++|.
T Consensus 160 g~~Kv~rl~~~~---~~~~---~~~~aYsDS~~D~pmL~~a-----~~~~~Vn 201 (210)
T TIGR01545 160 GHEKVAQLEQKI---GSPL---KLYSGYSDSKQDNPLLAFC-----EHRWRVS 201 (210)
T ss_pred ChHHHHHHHHHh---CCCh---hheEEecCCcccHHHHHhC-----CCcEEEC
Confidence 445555555544 4322 3678999999999999999 6788875
No 182
>PRK09449 dUMP phosphatase; Provisional
Probab=85.80 E-value=2.6 Score=38.42 Aligned_cols=65 Identities=18% Similarity=0.165 Sum_probs=46.2
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCce-EEEeeC-CCC---CccceEEeCChhHHHHHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHGY-GILVSS-VPK---ESKAFYSLRDPSEVMEFLK 374 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g~-~V~v~n-~~~---~t~A~y~l~~~~eV~~~L~ 374 (385)
....+.+++.+|+... +.+++|||+. +|..+=+.+ |+ +|.+.. +.. ...++|++.+..++.++|.
T Consensus 153 p~~~~~~~~~~~~~~~--~~~~~vgD~~~~Di~~A~~a-----G~~~i~~~~~~~~~~~~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 153 VAIFDYALEQMGNPDR--SRVLMVGDNLHSDILGGINA-----GIDTCWLNAHGREQPEGIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred HHHHHHHHHHcCCCCc--ccEEEEcCCcHHHHHHHHHC-----CCcEEEECCCCCCCCCCCCCeEEECCHHHHHHHHh
Confidence 4678899999997431 3799999997 698766665 54 455542 211 2358899999999988765
No 183
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=85.74 E-value=1.4 Score=39.75 Aligned_cols=36 Identities=28% Similarity=0.213 Sum_probs=27.5
Q ss_pred cCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 296 PVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 296 P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+- |.+|+..+..+.+.. +.++|+|||..|+.+-+..
T Consensus 143 ~f-G~dK~~vI~~l~e~~-------e~~fy~GDsvsDlsaakls 178 (220)
T COG4359 143 QF-GHDKSSVIHELSEPN-------ESIFYCGDSVSDLSAAKLS 178 (220)
T ss_pred cc-CCCcchhHHHhhcCC-------ceEEEecCCcccccHhhhh
Confidence 44 899999988887532 3699999999998775543
No 184
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=85.71 E-value=0.56 Score=43.76 Aligned_cols=64 Identities=14% Similarity=0.101 Sum_probs=41.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCC-CCCHHHHHHHHhCCCc-eEEEeeCCCC------C--ccceEEeCChhHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDD-RTDEDAFKELREGNHG-YGILVSSVPK------E--SKAFYSLRDPSEVM 370 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~-~nDe~mfk~~~~~~~g-~~V~v~n~~~------~--t~A~y~l~~~~eV~ 370 (385)
-+.......++.+|++.+ .+++|||+ ..|..+=+.+ | .+|.+..... . ..+++.+.+-.++.
T Consensus 164 P~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~a-----G~~~i~v~~~~~~~~~~~~~~~~p~~~i~~l~el~ 235 (238)
T PRK10748 164 PFSDMYHLAAEKLNVPIG---EILHVGDDLTTDVAGAIRC-----GMQACWINPENGDLMQTWDSRLLPHIEISRLASLT 235 (238)
T ss_pred CcHHHHHHHHHHcCCChh---HEEEEcCCcHHHHHHHHHC-----CCeEEEEcCCCccccccccccCCCCEEECCHHHHH
Confidence 346678888899998765 89999999 5998776665 4 3455533211 1 23555666666665
Q ss_pred HH
Q 016649 371 EF 372 (385)
Q Consensus 371 ~~ 372 (385)
++
T Consensus 236 ~~ 237 (238)
T PRK10748 236 SL 237 (238)
T ss_pred hh
Confidence 54
No 185
>PRK11587 putative phosphatase; Provisional
Probab=85.60 E-value=2.1 Score=39.09 Aligned_cols=29 Identities=28% Similarity=0.263 Sum_probs=19.9
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
.+.++||+||||++. . +...++++++.+.
T Consensus 3 ~k~viFDlDGTL~Ds-----~----~~~~~a~~~~~~~ 31 (218)
T PRK11587 3 CKGFLFDLDGTLVDS-----L----PAVERAWSNWADR 31 (218)
T ss_pred CCEEEEcCCCCcCcC-----H----HHHHHHHHHHHHH
Confidence 467899999999993 1 3345566665554
No 186
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=85.27 E-value=0.46 Score=41.89 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+....+.+++.++++.+ .+++|||+.+|..+=+.+
T Consensus 144 ~~~~~~~~~~~~~~~~~---~~v~IgD~~~di~aA~~~ 178 (185)
T TIGR02009 144 HPETFLLAAELLGVSPN---ECVVFEDALAGVQAARAA 178 (185)
T ss_pred ChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 35577899999998764 899999999998876665
No 187
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=84.98 E-value=1.5 Score=38.92 Aligned_cols=61 Identities=20% Similarity=0.152 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceE--EEeeCCCC-----CccceEEeCChhHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYG--ILVSSVPK-----ESKAFYSLRDPSEVM 370 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~--V~v~n~~~-----~t~A~y~l~~~~eV~ 370 (385)
+...+...++.+|++.+ .+++|||+.+|+.+=+.+ |+. |.+.-+.. ...|+++++++.++.
T Consensus 108 ~p~~~~~a~~~~~~~~~---~~v~VGDs~~Di~aA~~a-----G~~~~i~v~~g~~~~~~~~~~ad~~i~~~~el~ 175 (176)
T TIGR00213 108 KPGMLLQARKELHIDMA---QSYMVGDKLEDMQAGVAA-----KVKTNVLVRTGKPITPEAENIADWVLNSLADLP 175 (176)
T ss_pred CHHHHHHHHHHcCcChh---hEEEEcCCHHHHHHHHHC-----CCcEEEEEecCCcccccccccCCEEeccHHHhh
Confidence 46678889999998765 899999999998776666 542 44443321 124889998888764
No 188
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=84.91 E-value=0.81 Score=51.95 Aligned_cols=40 Identities=25% Similarity=0.401 Sum_probs=31.4
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEE
Q 016649 300 WDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGI 348 (385)
Q Consensus 300 ~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V 348 (385)
.-|+.-++.+.+..+. .+++|||+-||..|++.+. -|.||
T Consensus 780 lQKA~Vv~lVk~~~~~------~TLAIGDGANDVsMIQ~Ah---VGVGI 819 (1151)
T KOG0206|consen 780 LQKALVVKLVKKGLKA------VTLAIGDGANDVSMIQEAH---VGVGI 819 (1151)
T ss_pred HHHHHHHHHHHhcCCc------eEEEeeCCCccchheeeCC---cCeee
Confidence 3899998888555443 6999999999999999884 25565
No 189
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=84.59 E-value=0.63 Score=42.49 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=19.3
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
++|+||+||||++. .+...++++++.+.
T Consensus 2 k~iiFD~DGTL~ds---------~~~~~~~~~~~~~~ 29 (220)
T TIGR03351 2 SLVVLDMAGTTVDE---------DGLVYRALRQAVTA 29 (220)
T ss_pred cEEEEecCCCeecc---------CchHHHHHHHHHHH
Confidence 57889999999983 13445566655554
No 190
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=84.56 E-value=0.91 Score=40.25 Aligned_cols=35 Identities=23% Similarity=0.223 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+-...+++++.+|++.+ .+++|||+..|..+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~~~---~~l~vgD~~~di~aA~~~ 177 (184)
T TIGR01993 143 SPQAYEKALREAGVDPE---RAIFFDDSARNIAAAKAL 177 (184)
T ss_pred CHHHHHHHHHHhCCCcc---ceEEEeCCHHHHHHHHHc
Confidence 35688999999998765 899999998886554444
No 191
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=83.61 E-value=2.9 Score=37.55 Aligned_cols=79 Identities=19% Similarity=0.146 Sum_probs=50.3
Q ss_pred HHHhCCCCCCcHHHHH-HHhcCCCEEEEEecCCccCCCCCC---------C-------------------CcccCCHHHH
Q 016649 96 WQRQYPSALTSFEQIL-KSAKGKRIALFLDYDGTLSPIVDN---------P-------------------DCAFMSDAMR 146 (385)
Q Consensus 96 w~~~~~~~L~~~~~~~-~~~~~k~~li~lD~DGTL~~~~~~---------p-------------------~~~~is~~~~ 146 (385)
-..+-|-++=+..+|. +..-.+.+.+-||+|.|++-..+. | ++-.++.+..
T Consensus 40 l~~qa~ihwiSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA 119 (237)
T COG3700 40 LAEQAPIHWISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVA 119 (237)
T ss_pred HhhhCCeeEEEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHH
Confidence 3444555555678888 455556788889999999852110 1 1223555554
Q ss_pred HHHHHHH-hcC-CEEEEcCCChhHHHHHhC
Q 016649 147 AVVKNVA-KYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 147 ~aL~~L~-~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
..|-.+. +++ .++++|||++.+++..-.
T Consensus 120 ~qLI~MHq~RGD~i~FvTGRt~gk~d~vsk 149 (237)
T COG3700 120 RQLIDMHQRRGDAIYFVTGRTPGKTDTVSK 149 (237)
T ss_pred HHHHHHHHhcCCeEEEEecCCCCcccccch
Confidence 4444444 446 899999999987765543
No 192
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=83.41 E-value=0.92 Score=39.94 Aligned_cols=36 Identities=19% Similarity=0.203 Sum_probs=29.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
-+....+..++.++++.+ .+++|||+.+|..+=+.+
T Consensus 142 p~p~~~~~~~~~~~~~~~---~~v~vgD~~~di~aA~~a 177 (185)
T TIGR01990 142 PDPEIFLAAAEGLGVSPS---ECIGIEDAQAGIEAIKAA 177 (185)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEecCHHHHHHHHHc
Confidence 457778899999998754 899999999998776666
No 193
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=83.22 E-value=0.77 Score=44.06 Aligned_cols=56 Identities=18% Similarity=0.198 Sum_probs=34.2
Q ss_pred ccchhHhHHHHhCCCCCCc-HHHHHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 88 DTDVAYRTWQRQYPSALTS-FEQILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 88 ~~~~~~~~w~~~~~~~L~~-~~~~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
....+..+-.+.+|+.=.+ | ..|..+..+.++||+||||++. . +....+++++.+.
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~k~vIFDlDGTLiDS-----~----~~~~~a~~~~~~~ 90 (273)
T PRK13225 34 IKGGSFLHRLKGFSTRNPQVF---PQSYPQTLQAIIFDFDGTLVDS-----L----PTVVAIANAHAPD 90 (273)
T ss_pred cccchHHHHhcccccCChhhh---hhhhhhhcCEEEECCcCccccC-----H----HHHHHHHHHHHHH
Confidence 3445666677777765443 4 3334444678899999999993 1 2345555555544
No 194
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=83.17 E-value=0.71 Score=42.34 Aligned_cols=18 Identities=28% Similarity=0.348 Sum_probs=14.9
Q ss_pred cCCCEEEEEecCCccCCC
Q 016649 115 KGKRIALFLDYDGTLSPI 132 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~ 132 (385)
+++.+.|+||+||||++.
T Consensus 4 ~~~~k~iiFD~DGTL~d~ 21 (222)
T PRK10826 4 PRQILAAIFDMDGLLIDS 21 (222)
T ss_pred cccCcEEEEcCCCCCCcC
Confidence 345788999999999983
No 195
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=83.14 E-value=1.1 Score=41.98 Aligned_cols=15 Identities=27% Similarity=0.395 Sum_probs=13.1
Q ss_pred CEEEEEecCCccCCC
Q 016649 118 RIALFLDYDGTLSPI 132 (385)
Q Consensus 118 ~~li~lD~DGTL~~~ 132 (385)
.+.|+||+||||++.
T Consensus 2 ~k~viFD~DGTLiDs 16 (253)
T TIGR01422 2 IEAVIFDWAGTTVDF 16 (253)
T ss_pred ceEEEEeCCCCeecC
Confidence 468999999999994
No 196
>PHA02597 30.2 hypothetical protein; Provisional
Probab=83.13 E-value=0.58 Score=42.03 Aligned_cols=60 Identities=18% Similarity=0.160 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCCCC--ccceEEeCChhHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVPKE--SKAFYSLRDPSEV 369 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~~~--t~A~y~l~~~~eV 369 (385)
|...+..+++.+| +. .+++|||+.+|..+=+.+- .|+ +|.+..+..+ ....|.+.+-.|+
T Consensus 132 kp~~~~~a~~~~~-~~----~~v~vgDs~~di~aA~~a~---~Gi~~i~~~~~~~~~~~~~~~~~~~~~~~ 194 (197)
T PHA02597 132 KEKLFIKAKEKYG-DR----VVCFVDDLAHNLDAAHEAL---SQLPVIHMLRGERDHIPKLAHRVKSWNDI 194 (197)
T ss_pred cHHHHHHHHHHhC-CC----cEEEeCCCHHHHHHHHHHH---cCCcEEEecchhhccccchhhhhccHHHH
Confidence 5678899999999 32 6999999999976655530 032 4455433222 2344666555544
No 197
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=83.11 E-value=2.4 Score=39.78 Aligned_cols=15 Identities=40% Similarity=0.496 Sum_probs=12.9
Q ss_pred CEEEEEecCCccCCC
Q 016649 118 RIALFLDYDGTLSPI 132 (385)
Q Consensus 118 ~~li~lD~DGTL~~~ 132 (385)
.+.|+||+||||++.
T Consensus 22 ~k~viFDlDGTLiDs 36 (248)
T PLN02770 22 LEAVLFDVDGTLCDS 36 (248)
T ss_pred cCEEEEcCCCccCcC
Confidence 467899999999993
No 198
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=82.64 E-value=1.2 Score=37.93 Aligned_cols=48 Identities=8% Similarity=0.067 Sum_probs=40.4
Q ss_pred EEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhCC
Q 016649 122 FLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVGL 175 (385)
Q Consensus 122 ~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~~ 175 (385)
+.++++|+..- ..+-+++.++|++|.+...++|+||-....+.++..+
T Consensus 18 ~~~v~~tiatg------Gklf~ev~e~iqeL~d~V~i~IASgDr~gsl~~lae~ 65 (152)
T COG4087 18 AGKVLYTIATG------GKLFSEVSETIQELHDMVDIYIASGDRKGSLVQLAEF 65 (152)
T ss_pred cceEEEEEccC------cEEcHhhHHHHHHHHHhheEEEecCCcchHHHHHHHH
Confidence 46889999983 4567899999999999899999999999888877653
No 199
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=82.53 E-value=3.2 Score=42.74 Aligned_cols=66 Identities=23% Similarity=0.193 Sum_probs=47.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCC--C--CccceEEeCChhHHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVP--K--ESKAFYSLRDPSEVMEFLKS 375 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~--~--~t~A~y~l~~~~eV~~~L~~ 375 (385)
.|...+...++.++. ..+++|||+.+|..+-+.+ |+ +|.+..+. . ...++|++.+..++.++|..
T Consensus 386 ~kP~~~~~al~~l~~-----~~~v~VGDs~~Di~aAk~A-----G~~~I~v~~~~~~~~~~~~~d~~i~~l~el~~~l~~ 455 (459)
T PRK06698 386 NKSDLVKSILNKYDI-----KEAAVVGDRLSDINAAKDN-----GLIAIGCNFDFAQEDELAQADIVIDDLLELKGILST 455 (459)
T ss_pred CCcHHHHHHHHhcCc-----ceEEEEeCCHHHHHHHHHC-----CCeEEEEeCCCCcccccCCCCEEeCCHHHHHHHHHH
Confidence 355677888887653 2799999999999888887 53 55564332 1 24688999999999887754
Q ss_pred H
Q 016649 376 F 376 (385)
Q Consensus 376 L 376 (385)
+
T Consensus 456 ~ 456 (459)
T PRK06698 456 V 456 (459)
T ss_pred H
Confidence 3
No 200
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=82.31 E-value=2.7 Score=39.03 Aligned_cols=89 Identities=19% Similarity=0.146 Sum_probs=54.6
Q ss_pred ecCeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEee--C--------CCC-
Q 016649 287 HGRKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVS--S--------VPK- 355 (385)
Q Consensus 287 ~g~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~--n--------~~~- 355 (385)
+.+......|+ +.=||..++.+..+.--+.-..+.++|+||+-||.--...++. .-|+|. + +.+
T Consensus 150 H~~hsC~~CPs-NmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr~----~D~ampRkgfpl~k~~~~~p~ 224 (256)
T KOG3120|consen 150 HTQHSCNLCPS-NMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLRA----CDVAMPRKGFPLWKLISANPM 224 (256)
T ss_pred CCCCccCcCch-hhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhccc----CceecccCCCchHhhhhcCcc
Confidence 33345566799 9999999999998762222123489999999999876555542 223331 1 011
Q ss_pred CccceEEe-CChhHHHHHHHHHHHhh
Q 016649 356 ESKAFYSL-RDPSEVMEFLKSFVMWK 380 (385)
Q Consensus 356 ~t~A~y~l-~~~~eV~~~L~~L~~~~ 380 (385)
.-.|+-.. .+-.++...|..+++.-
T Consensus 225 ~~kasV~~W~sg~d~~~~L~~lik~~ 250 (256)
T KOG3120|consen 225 LLKASVLEWSSGEDLERILQQLIKTI 250 (256)
T ss_pred eeeeeEEecccHHHHHHHHHHHHHHh
Confidence 12333333 47777888887776443
No 201
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=82.29 E-value=0.75 Score=44.37 Aligned_cols=60 Identities=23% Similarity=0.152 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCC--CC--ccceEEeCChhHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVP--KE--SKAFYSLRDPSEV 369 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~--~~--t~A~y~l~~~~eV 369 (385)
+...+..+++.+|++.+ .+++|||+.+|+.+=+.+ |+ .|.|..+. .+ ..|++++++..++
T Consensus 204 ~p~~~~~a~~~~~~~p~---~~l~IGDs~~Di~aA~~a-----G~~~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETLGVDPS---RCVVVEDSVIGLQAAKAA-----GMRCIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHhCcChH---HEEEEeCCHHhHHHHHHc-----CCEEEEEccCCccccccCCCcEEECChhhc
Confidence 35688999999998764 899999999998887776 53 44453332 11 4588888887664
No 202
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=82.17 E-value=0.85 Score=41.44 Aligned_cols=50 Identities=12% Similarity=0.037 Sum_probs=28.5
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeC---CCCCHHHHHHH-HhC-C--CceEEEeeCCC
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGD---DRTDEDAFKEL-REG-N--HGYGILVSSVP 354 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD---~~nDe~mfk~~-~~~-~--~g~~V~v~n~~ 354 (385)
..++.+++.+|+... .+.+++.+| ...|-++|..+ ++. + ..-.|.+|...
T Consensus 124 ~~~~~~l~~~~l~~~-fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~v~igD~~ 180 (224)
T TIGR02254 124 ETQYKRLRKSGLFPF-FDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEVLMIGDSL 180 (224)
T ss_pred HHHHHHHHHCCcHhh-cCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchheEEECCCc
Confidence 345677888888642 345665555 24677776654 333 2 12357777543
No 203
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=81.86 E-value=1 Score=39.34 Aligned_cols=30 Identities=13% Similarity=0.117 Sum_probs=24.5
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDA 335 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~m 335 (385)
....+.+++.+|++.+ .+++|||+..|..+
T Consensus 142 p~~f~~~~~~~~~~p~---~~l~vgD~~~Di~~ 171 (175)
T TIGR01493 142 PVVYELVFDTVGLPPD---RVLMVAAHQWDLIG 171 (175)
T ss_pred HHHHHHHHHHHCCCHH---HeEeEecChhhHHH
Confidence 4556888899998764 89999999988765
No 204
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=81.72 E-value=3 Score=39.65 Aligned_cols=62 Identities=18% Similarity=0.169 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeC-CCC--CccceEEeCChhHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSS-VPK--ESKAFYSLRDPSEVME 371 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n-~~~--~t~A~y~l~~~~eV~~ 371 (385)
+......+++.+|++.+ .+++|||+.+|+.+=+.+ |+ +|.+.. ... -..|+|++.++.++..
T Consensus 167 ~Pe~~~~a~~~l~~~p~---~~l~IgDs~~Di~aA~~a-----G~~~i~v~g~~~~~~l~~ad~vi~~~~el~~ 232 (260)
T PLN03243 167 DPEMFMYAAERLGFIPE---RCIVFGNSNSSVEAAHDG-----CMKCVAVAGKHPVYELSAGDLVVRRLDDLSV 232 (260)
T ss_pred CHHHHHHHHHHhCCChH---HeEEEcCCHHHHHHHHHc-----CCEEEEEecCCchhhhccCCEEeCCHHHHHH
Confidence 35678899999998765 899999999998776666 43 444432 111 1468899999888654
No 205
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=81.72 E-value=1.8 Score=45.11 Aligned_cols=65 Identities=26% Similarity=0.319 Sum_probs=45.5
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCCccceEEeC--ChhH
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKESKAFYSLR--DPSE 368 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A~y~l~--~~~e 368 (385)
+-++.|. +|...++.+.+. | ..++++||+.||.+|++.+ .+||+|+ ....|+.++- +...
T Consensus 387 ~~~~~p~---~K~~~v~~l~~~-g------~~v~~vGDg~nD~~al~~A-----dvgia~~---a~~~adivl~~~~l~~ 448 (499)
T TIGR01494 387 FARVTPE---EKAALVEALQKK-G------RVVAMTGDGVNDAPALKKA-----DVGIAMG---AKAAADIVLLDDNLST 448 (499)
T ss_pred eeccCHH---HHHHHHHHHHHC-C------CEEEEECCChhhHHHHHhC-----CCccccc---hHHhCCeEEecCCHHH
Confidence 4456666 788777776432 2 2799999999999999988 5888887 2345888874 3444
Q ss_pred HHHHH
Q 016649 369 VMEFL 373 (385)
Q Consensus 369 V~~~L 373 (385)
+...+
T Consensus 449 i~~~~ 453 (499)
T TIGR01494 449 IVDAL 453 (499)
T ss_pred HHHHH
Confidence 44443
No 206
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=81.67 E-value=2.9 Score=37.92 Aligned_cols=34 Identities=24% Similarity=0.259 Sum_probs=20.6
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF 156 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~ 156 (385)
.++++||+||||++.. ..+......+.+.+.+.+
T Consensus 2 ~~~viFDlDGTL~ds~-----~~~~~~~~~~~~~~~~~g 35 (221)
T TIGR02253 2 IKAIFFDLDDTLIDTS-----GLAEKARRNAIEVLIEAG 35 (221)
T ss_pred ceEEEEeCCCCCcCCC-----CccCHHHHHHHHHHHHCC
Confidence 3678999999999942 223333444444555543
No 207
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=81.48 E-value=0.73 Score=42.68 Aligned_cols=14 Identities=43% Similarity=0.527 Sum_probs=12.5
Q ss_pred CEEEEEecCCccCC
Q 016649 118 RIALFLDYDGTLSP 131 (385)
Q Consensus 118 ~~li~lD~DGTL~~ 131 (385)
.++|+||+||||++
T Consensus 10 ~k~vIFDlDGTL~d 23 (224)
T PRK14988 10 VDTVLLDMDGTLLD 23 (224)
T ss_pred CCEEEEcCCCCccc
Confidence 46799999999999
No 208
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=81.41 E-value=0.7 Score=42.81 Aligned_cols=28 Identities=32% Similarity=0.351 Sum_probs=19.4
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
+.++||+||||++. . +...++++.+.+.
T Consensus 13 k~viFD~DGTL~Ds-----~----~~~~~a~~~~~~~ 40 (229)
T PRK13226 13 RAVLFDLDGTLLDS-----A----PDMLATVNAMLAA 40 (229)
T ss_pred CEEEEcCcCccccC-----H----HHHHHHHHHHHHH
Confidence 57899999999993 1 3345566666554
No 209
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=80.43 E-value=3.3 Score=39.90 Aligned_cols=16 Identities=38% Similarity=0.461 Sum_probs=13.4
Q ss_pred CCEEEEEecCCccCCC
Q 016649 117 KRIALFLDYDGTLSPI 132 (385)
Q Consensus 117 k~~li~lD~DGTL~~~ 132 (385)
+-++|+||+||||++.
T Consensus 39 ~~k~VIFDlDGTLvDS 54 (286)
T PLN02779 39 LPEALLFDCDGVLVET 54 (286)
T ss_pred CCcEEEEeCceeEEcc
Confidence 3468999999999993
No 210
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=80.20 E-value=0.82 Score=39.11 Aligned_cols=34 Identities=29% Similarity=0.384 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKE 338 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~ 338 (385)
.+...+..+++.+|++. .+++|||+..|..+=+.
T Consensus 119 p~~~~~~~~~~~~~~~~----~~l~iGDs~~Di~aa~~ 152 (154)
T TIGR01549 119 PEPEIFLAALESLGLPP----EVLHVGDNLNDIEGARN 152 (154)
T ss_pred cCHHHHHHHHHHcCCCC----CEEEEeCCHHHHHHHHH
Confidence 35788999999999863 69999999988766444
No 211
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=80.17 E-value=1 Score=41.44 Aligned_cols=16 Identities=38% Similarity=0.648 Sum_probs=13.9
Q ss_pred CCEEEEEecCCccCCC
Q 016649 117 KRIALFLDYDGTLSPI 132 (385)
Q Consensus 117 k~~li~lD~DGTL~~~ 132 (385)
.+++.+||+||||+..
T Consensus 4 ~~~la~FDfDgTLt~~ 19 (210)
T TIGR01545 4 AKRIIFFDLDGTLHQQ 19 (210)
T ss_pred cCcEEEEcCCCCCccC
Confidence 5678889999999994
No 212
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=80.07 E-value=0.9 Score=43.46 Aligned_cols=29 Identities=24% Similarity=0.259 Sum_probs=20.8
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
.++|+||+||||++. .+...++++++.+.
T Consensus 13 ~k~viFDlDGTL~Ds---------~~~~~~a~~~~~~~ 41 (272)
T PRK13223 13 PRLVMFDLDGTLVDS---------VPDLAAAVDRMLLE 41 (272)
T ss_pred CCEEEEcCCCccccC---------HHHHHHHHHHHHHH
Confidence 358999999999993 13456666666655
No 213
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=80.03 E-value=5.8 Score=37.53 Aligned_cols=50 Identities=12% Similarity=0.145 Sum_probs=38.9
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHH
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVY 170 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~ 170 (385)
++|+||+||||..... ....+.+.+.++|++|++.+ +++++|||+.....
T Consensus 2 k~i~~D~DGtl~~~~~--~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~ 52 (257)
T TIGR01458 2 KGVLLDISGVLYISDA--KSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQ 52 (257)
T ss_pred CEEEEeCCCeEEeCCC--cccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHH
Confidence 5799999999998311 00126779999999999997 89999998777533
No 214
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=80.03 E-value=1.1 Score=41.24 Aligned_cols=47 Identities=28% Similarity=0.427 Sum_probs=27.7
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEe-CCC-C---C-HHHHHHHHhCCCc--eEEEeeCC
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVG-DDR-T---D-EDAFKELREGNHG--YGILVSSV 353 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~G-D~~-n---D-e~mfk~~~~~~~g--~~V~v~n~ 353 (385)
..++.+++.+|+..- |-..+| |+. . | ..++..+++.+.. -.+.||..
T Consensus 117 ~~~~~~l~~~gl~~~---F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~~~l~VGDs 171 (220)
T COG0546 117 RELDILLKALGLADY---FDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPEEALMVGDS 171 (220)
T ss_pred HHHHHHHHHhCCccc---cceEEcCCCCCCCCcCHHHHHHHHHHhCCChhheEEECCC
Confidence 456889999999864 555666 532 1 3 4445555554333 24677754
No 215
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=78.97 E-value=1.3 Score=40.38 Aligned_cols=36 Identities=14% Similarity=0.060 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
-+......+++.+|++.+ .+++|||+.+|+.+=+.+
T Consensus 143 P~p~~~~~a~~~~~~~p~---~~l~igDs~~di~aA~~a 178 (221)
T PRK10563 143 PDPALMFHAAEAMNVNVE---NCILVDDSSAGAQSGIAA 178 (221)
T ss_pred CChHHHHHHHHHcCCCHH---HeEEEeCcHhhHHHHHHC
Confidence 457899999999999764 899999999998776665
No 216
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=78.88 E-value=2.1 Score=41.29 Aligned_cols=57 Identities=18% Similarity=0.420 Sum_probs=39.0
Q ss_pred CCEEEEEecCCccCCCCC-CC-----------CcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHh
Q 016649 117 KRIALFLDYDGTLSPIVD-NP-----------DCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFV 173 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~-~p-----------~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 173 (385)
.+..|+.|+|-||+.... +. ....++++.++-+++|.+.. |+=|-+.-+.++-..++
T Consensus 21 ~~lqvisDFD~Tlt~~~~~~g~~~~s~~~~~~~~~~~~~~~~~~~~~l~~~Y~PiE~d~~~~~~eK~~~m 90 (277)
T TIGR01544 21 AKLQIISDFDYTLSRFSYEDGKRCPTCHGIFDNCKLLTDECRKKLLQLKEKYYPIEVDPVLTVEEKYPYM 90 (277)
T ss_pred hheEEeeccCccceeeecCCCCCCcchHhHHhhCCCCCHHHHHHHHHHHhhccceecCCCCChHHhhhHH
Confidence 356788999999998541 11 24456888888888888774 77776666666544433
No 217
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=78.58 E-value=1.1 Score=40.76 Aligned_cols=15 Identities=40% Similarity=0.454 Sum_probs=13.1
Q ss_pred CCEEEEEecCCccCC
Q 016649 117 KRIALFLDYDGTLSP 131 (385)
Q Consensus 117 k~~li~lD~DGTL~~ 131 (385)
.-++++||+||||++
T Consensus 5 ~~~~iiFD~DGTL~d 19 (226)
T PRK13222 5 DIRAVAFDLDGTLVD 19 (226)
T ss_pred cCcEEEEcCCccccc
Confidence 456899999999997
No 218
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=78.24 E-value=1.2 Score=42.24 Aligned_cols=16 Identities=31% Similarity=0.453 Sum_probs=13.7
Q ss_pred CCEEEEEecCCccCCC
Q 016649 117 KRIALFLDYDGTLSPI 132 (385)
Q Consensus 117 k~~li~lD~DGTL~~~ 132 (385)
+-++|+||+||||++.
T Consensus 3 ~~k~vIFDlDGTLiDs 18 (267)
T PRK13478 3 KIQAVIFDWAGTTVDF 18 (267)
T ss_pred ceEEEEEcCCCCeecC
Confidence 3578999999999994
No 219
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=77.70 E-value=2 Score=38.50 Aligned_cols=34 Identities=21% Similarity=0.265 Sum_probs=28.8
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
....+.+++.+|++++ .+++|||+.+|..+-+.+
T Consensus 151 ~~~~~~~~~~~~~~p~---~~~~vgD~~~Di~~A~~~ 184 (198)
T TIGR01428 151 PQVYQLALEALGVPPD---EVLFVASNPWDLGGAKKF 184 (198)
T ss_pred HHHHHHHHHHhCCChh---hEEEEeCCHHHHHHHHHC
Confidence 5678999999999765 899999999998876665
No 220
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=77.53 E-value=1.4 Score=40.78 Aligned_cols=33 Identities=21% Similarity=0.195 Sum_probs=26.1
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
..-.+-++.||+++. .+++|.|+.+.+.+-+.+
T Consensus 146 d~yL~Aa~~Lgv~P~---~CvviEDs~~Gi~Aa~aA 178 (221)
T COG0637 146 DIYLLAAERLGVDPE---ECVVVEDSPAGIQAAKAA 178 (221)
T ss_pred HHHHHHHHHcCCChH---HeEEEecchhHHHHHHHC
Confidence 344555677887765 899999999999888887
No 221
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=76.77 E-value=1.8 Score=39.35 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=29.3
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+-.|+.++..|.+ +++.. .++.+||+-||++|..-+
T Consensus 157 sggKa~~i~~lrk--~~~~~---~~~mvGDGatDlea~~pa 192 (227)
T KOG1615|consen 157 SGGKAEVIALLRK--NYNYK---TIVMVGDGATDLEAMPPA 192 (227)
T ss_pred CCccHHHHHHHHh--CCChh---eeEEecCCccccccCCch
Confidence 6689999999998 44433 799999999999986554
No 222
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=76.28 E-value=0.84 Score=47.06 Aligned_cols=29 Identities=24% Similarity=0.340 Sum_probs=19.4
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHH
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNV 152 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L 152 (385)
+.++||+||||++. ...+.....++++++
T Consensus 242 k~vIFDlDGTLiDs-----~~~~~~a~~~~~~~~ 270 (459)
T PRK06698 242 QALIFDMDGTLFQT-----DKILELSLDDTFDHL 270 (459)
T ss_pred hheeEccCCceecc-----hhHHHHHHHHHHHHH
Confidence 67899999999993 223344455555554
No 223
>PLN02645 phosphoglycolate phosphatase
Probab=76.14 E-value=9.1 Score=37.29 Aligned_cols=66 Identities=17% Similarity=0.084 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCceEEEeeCCC--CC--------ccceEEeCChhHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHGYGILVSSVP--KE--------SKAFYSLRDPSEVM 370 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g~~V~v~n~~--~~--------t~A~y~l~~~~eV~ 370 (385)
+-..++.+++.++++.+ .+++|||+. +|+.+=+.+. -.+|.|..+. .+ -.++|++++..++.
T Consensus 232 ~p~~~~~a~~~~~~~~~---~~~~VGD~~~~Di~~A~~aG----~~~ilV~~G~~~~~~~~~~~~~~~pd~~~~~~~~l~ 304 (311)
T PLN02645 232 STFMMDYLANKFGIEKS---QICMVGDRLDTDILFGQNGG----CKTLLVLSGVTSESMLLSPENKIQPDFYTSKISDFL 304 (311)
T ss_pred hHHHHHHHHHHcCCCcc---cEEEEcCCcHHHHHHHHHcC----CCEEEEcCCCCCHHHHHhccCCCCCCEEECCHHHHH
Confidence 45577888999998765 899999997 9988766662 2466664432 11 24788899998887
Q ss_pred HHHH
Q 016649 371 EFLK 374 (385)
Q Consensus 371 ~~L~ 374 (385)
++++
T Consensus 305 ~~~~ 308 (311)
T PLN02645 305 TLKA 308 (311)
T ss_pred HHhh
Confidence 7664
No 224
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=75.93 E-value=1.5 Score=41.78 Aligned_cols=14 Identities=14% Similarity=0.596 Sum_probs=12.4
Q ss_pred CEEEEEecCCccCC
Q 016649 118 RIALFLDYDGTLSP 131 (385)
Q Consensus 118 ~~li~lD~DGTL~~ 131 (385)
.++|+||+||||++
T Consensus 24 ~k~vIFDlDGTLvD 37 (260)
T PLN03243 24 WLGVVLEWEGVIVE 37 (260)
T ss_pred ceEEEEeCCCceeC
Confidence 46788999999998
No 225
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=75.63 E-value=4 Score=38.39 Aligned_cols=34 Identities=18% Similarity=0.154 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHHh--cC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAK--YF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~--~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+.+.|.++|+.+++ .+ .++|+|--.-..++.++.
T Consensus 72 ~~pgm~~~l~~l~~~~~~~~~~IiSDaNs~fI~~iL~ 108 (234)
T PF06888_consen 72 IDPGMKELLRFLAKNQRGFDLIIISDANSFFIETILE 108 (234)
T ss_pred CCccHHHHHHHHHhcCCCceEEEEeCCcHhHHHHHHH
Confidence 45667777777754 23 788888888888877774
No 226
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=75.48 E-value=4.3 Score=37.03 Aligned_cols=34 Identities=18% Similarity=0.211 Sum_probs=27.7
Q ss_pred cCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHh
Q 016649 140 FMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFV 173 (385)
Q Consensus 140 ~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 173 (385)
.+++..++.++.|++.+ +|+++||-=+..+...-
T Consensus 88 ~lT~Gi~eLv~~L~~~~~~v~liSGGF~~~i~~Va 122 (227)
T KOG1615|consen 88 TLTPGIRELVSRLHARGTQVYLISGGFRQLIEPVA 122 (227)
T ss_pred ccCCCHHHHHHHHHHcCCeEEEEcCChHHHHHHHH
Confidence 56888999999999986 89999998776665544
No 227
>PRK09449 dUMP phosphatase; Provisional
Probab=74.93 E-value=1.6 Score=39.93 Aligned_cols=49 Identities=16% Similarity=0.120 Sum_probs=26.4
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeC---CCCCHHHHHHH-HhCCC---ceEEEeeCCC
Q 016649 305 AVMFLLESLGLNNCEDVLPIYVGD---DRTDEDAFKEL-REGNH---GYGILVSSVP 354 (385)
Q Consensus 305 Al~~Ll~~lg~~~~~~~~vi~~GD---~~nDe~mfk~~-~~~~~---g~~V~v~n~~ 354 (385)
.++..++++|+... .+.+++.+| ..-|-++|..+ ++.+. .-.+.||...
T Consensus 123 ~~~~~l~~~~l~~~-fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~~~~vgD~~ 178 (224)
T PRK09449 123 LQQVRLERTGLRDY-FDLLVISEQVGVAKPDVAIFDYALEQMGNPDRSRVLMVGDNL 178 (224)
T ss_pred HHHHHHHhCChHHH-cCEEEEECccCCCCCCHHHHHHHHHHcCCCCcccEEEEcCCc
Confidence 45667788887542 234444333 24577787764 33321 2356666543
No 228
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=73.77 E-value=11 Score=38.99 Aligned_cols=63 Identities=24% Similarity=0.204 Sum_probs=45.5
Q ss_pred HhcCCCEEEEEecCCccCCCC--CCC-CcccCC--------HHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCC
Q 016649 113 SAKGKRIALFLDYDGTLSPIV--DNP-DCAFMS--------DAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGL 175 (385)
Q Consensus 113 ~~~~k~~li~lD~DGTL~~~~--~~p-~~~~is--------~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~ 175 (385)
-....++.++||+|+||...+ ++. +...++ ....+.++.|.+++ -++|||=.....+.+.|..
T Consensus 217 ~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF~k 291 (574)
T COG3882 217 MSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVFRK 291 (574)
T ss_pred hhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHHhh
Confidence 334556899999999999732 221 222333 35667788888887 7899999999999998864
No 229
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=71.35 E-value=2.3 Score=38.54 Aligned_cols=34 Identities=18% Similarity=0.252 Sum_probs=27.9
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
....+.+++.+|++++ .+++|||...|..+=+.+
T Consensus 155 p~~~~~~~~~~g~~~~---~~l~i~D~~~di~aA~~a 188 (211)
T TIGR02247 155 PRIYQLMLERLGVAPE---ECVFLDDLGSNLKPAAAL 188 (211)
T ss_pred HHHHHHHHHHcCCCHH---HeEEEcCCHHHHHHHHHc
Confidence 5578899999998764 899999999998776666
No 230
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=71.23 E-value=3.9 Score=37.26 Aligned_cols=16 Identities=44% Similarity=0.586 Sum_probs=13.4
Q ss_pred CCEEEEEecCCccCCC
Q 016649 117 KRIALFLDYDGTLSPI 132 (385)
Q Consensus 117 k~~li~lD~DGTL~~~ 132 (385)
+.++++||+||||++.
T Consensus 3 ~~~~viFD~DGTL~d~ 18 (221)
T PRK10563 3 QIEAVFFDCDGTLVDS 18 (221)
T ss_pred CCCEEEECCCCCCCCC
Confidence 3568899999999983
No 231
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=70.78 E-value=3.3 Score=36.42 Aligned_cols=36 Identities=22% Similarity=0.185 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
-|...++.+++.++++.+ ++++|||+.+|..+-+.+
T Consensus 104 P~~~~~~~~~~~~~~~~~---e~l~IGD~~~Di~~A~~a 139 (161)
T TIGR01261 104 PKIKLLEPYLKKNLIDKA---RSYVIGDRETDMQLAENL 139 (161)
T ss_pred CCHHHHHHHHHHcCCCHH---HeEEEeCCHHHHHHHHHC
Confidence 346778899999988764 899999999999887776
No 232
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=70.53 E-value=6.5 Score=32.68 Aligned_cols=36 Identities=31% Similarity=0.350 Sum_probs=30.3
Q ss_pred CHHHHHHHHHHHc-CCCCCCCceEEEEeC-CCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESL-GLNNCEDVLPIYVGD-DRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~l-g~~~~~~~~vi~~GD-~~nDe~mfk~~ 339 (385)
.|..+++.+++.+ +++.+ .+++||| ..+|+.+-+.+
T Consensus 86 P~~~~~~~~~~~~~~~~~~---~~v~IGD~~~~Di~~A~~~ 123 (132)
T TIGR01662 86 PKPGMFLEALKRFNEIDPE---ESVYVGDQDLTDLQAAKRA 123 (132)
T ss_pred CChHHHHHHHHHcCCCChh---heEEEcCCCcccHHHHHHC
Confidence 4678999999999 58765 8999999 79998877766
No 233
>PLN02940 riboflavin kinase
Probab=69.22 E-value=2.6 Score=42.47 Aligned_cols=61 Identities=20% Similarity=0.112 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCce-EEEeeCCCC----CccceEEeCChhHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGY-GILVSSVPK----ESKAFYSLRDPSEV 369 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~-~V~v~n~~~----~t~A~y~l~~~~eV 369 (385)
-+......+++.+|++.+ .+++|||+.+|+.+=+.+ |+ .|.+..+.. ...|++++++..++
T Consensus 151 P~p~~~~~a~~~lgv~p~---~~l~VGDs~~Di~aA~~a-----Gi~~I~v~~g~~~~~~~~~ad~~i~sl~el 216 (382)
T PLN02940 151 PSPDIFLEAAKRLNVEPS---NCLVIEDSLPGVMAGKAA-----GMEVIAVPSIPKQTHLYSSADEVINSLLDL 216 (382)
T ss_pred CCHHHHHHHHHHcCCChh---HEEEEeCCHHHHHHHHHc-----CCEEEEECCCCcchhhccCccEEeCCHhHc
Confidence 456788999999998865 899999999998776666 53 455544321 24677788777664
No 234
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=68.42 E-value=12 Score=34.88 Aligned_cols=21 Identities=29% Similarity=0.433 Sum_probs=17.3
Q ss_pred HhcCCCEEEEEecCCccCCCC
Q 016649 113 SAKGKRIALFLDYDGTLSPIV 133 (385)
Q Consensus 113 ~~~~k~~li~lD~DGTL~~~~ 133 (385)
...+.++|++||+|-|+++..
T Consensus 8 ~~~~~ril~~FDFD~TIid~d 28 (256)
T KOG3120|consen 8 ASSSPRILLVFDFDRTIIDQD 28 (256)
T ss_pred cccCCcEEEEEecCceeecCC
Confidence 445689999999999999743
No 235
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=67.43 E-value=7.2 Score=35.00 Aligned_cols=35 Identities=14% Similarity=0.335 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+....+.+++.+|++++ .+++|||+..|..+=+.+
T Consensus 143 ~p~~~~~~~~~~~~~p~---~~l~vgD~~~di~aA~~a 177 (199)
T PRK09456 143 EARIYQHVLQAEGFSAA---DAVFFDDNADNIEAANAL 177 (199)
T ss_pred CHHHHHHHHHHcCCChh---HeEEeCCCHHHHHHHHHc
Confidence 46778899999999765 899999998875544444
No 236
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=67.34 E-value=14 Score=34.21 Aligned_cols=16 Identities=38% Similarity=0.320 Sum_probs=13.7
Q ss_pred CCEEEEEecCCccCCC
Q 016649 117 KRIALFLDYDGTLSPI 132 (385)
Q Consensus 117 k~~li~lD~DGTL~~~ 132 (385)
+.++|+||+||||++.
T Consensus 9 ~~k~iiFDlDGTL~D~ 24 (238)
T PRK10748 9 RISALTFDLDDTLYDN 24 (238)
T ss_pred CceeEEEcCcccccCC
Confidence 3578999999999994
No 237
>PLN02940 riboflavin kinase
Probab=67.31 E-value=9.8 Score=38.33 Aligned_cols=29 Identities=28% Similarity=0.291 Sum_probs=20.1
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
-++|+||+||||++. .+-..++++++.+.
T Consensus 11 ik~VIFDlDGTLvDt---------~~~~~~a~~~~~~~ 39 (382)
T PLN02940 11 VSHVILDLDGTLLNT---------DGIVSDVLKAFLVK 39 (382)
T ss_pred CCEEEECCcCcCCcC---------HHHHHHHHHHHHHH
Confidence 567899999999993 13455566665554
No 238
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=65.65 E-value=3.8 Score=36.60 Aligned_cols=46 Identities=11% Similarity=0.119 Sum_probs=26.5
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeC--CCCCHHHHHHHHhCC--CceEEEeeCC
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGD--DRTDEDAFKELREGN--HGYGILVSSV 353 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD--~~nDe~mfk~~~~~~--~g~~V~v~n~ 353 (385)
..+..+++.+|+.. ..++.+. ...+.-+++.++.++ .+..+.||.+
T Consensus 155 ~~a~~~~~~lgi~~----~~v~a~~~~kP~~k~~~~~i~~l~~~~~~v~~vGDg 204 (215)
T PF00702_consen 155 STASAIAKQLGIFD----SIVFARVIGKPEPKIFLRIIKELQVKPGEVAMVGDG 204 (215)
T ss_dssp HHHHHHHHHTTSCS----EEEEESHETTTHHHHHHHHHHHHTCTGGGEEEEESS
T ss_pred cccccccccccccc----ccccccccccccchhHHHHHHHHhcCCCEEEEEccC
Confidence 44588899999953 3344444 455554455555543 2345566654
No 239
>PRK10444 UMP phosphatase; Provisional
Probab=65.03 E-value=19 Score=33.95 Aligned_cols=62 Identities=18% Similarity=0.038 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCceEEEeeCCCC--------CccceEEeCChhHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHGYGILVSSVPK--------ESKAFYSLRDPSEV 369 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g~~V~v~n~~~--------~t~A~y~l~~~~eV 369 (385)
-+...++.+++.++++.+ .+++|||+. +|..+=+.+. -.+|.|..+.- +...+|++++..++
T Consensus 175 P~~~~~~~~~~~~~~~~~---~~v~IGD~~~tDi~~A~~~G----~~~vlV~~G~~~~~~l~~~~~~pd~~~~sl~el 245 (248)
T PRK10444 175 PSPWIIRAALNKMQAHSE---ETVIVGDNLRTDILAGFQAG----LETILVLSGVSTLDDIDSMPFRPSWIYPSVADI 245 (248)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEECCCcHHHHHHHHHcC----CCEEEECCCCCCHHHHhcCCCCCCEEECCHHHh
Confidence 456778899999988765 899999996 8988777762 25666754421 13467888877664
No 240
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=64.85 E-value=14 Score=40.78 Aligned_cols=37 Identities=22% Similarity=0.261 Sum_probs=30.0
Q ss_pred eEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCC-C--CccceEEe
Q 016649 322 LPIYVGDDRTDEDAFKELREGNHGYGILVSSVP-K--ESKAFYSL 363 (385)
Q Consensus 322 ~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~-~--~t~A~y~l 363 (385)
-|.+.||+.||-+++|.+ .+||+||=+. + +.+|+-.|
T Consensus 707 iVaVTGDGVNDsPALKKA-----DIGVAMGiaGSDvsKqAADmIL 746 (1019)
T KOG0203|consen 707 IVAVTGDGVNDSPALKKA-----DIGVAMGIAGSDVSKQAADMIL 746 (1019)
T ss_pred EEEEeCCCcCCChhhccc-----ccceeeccccchHHHhhcceEE
Confidence 678899999999999999 5999997532 2 36788876
No 241
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=64.83 E-value=2.9 Score=36.45 Aligned_cols=34 Identities=24% Similarity=0.296 Sum_probs=28.2
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
....+.+++.+|++.+ .+++|||+..|..+=+.+
T Consensus 143 ~~~~~~~~~~~~~~~~---~~~~vgD~~~di~aA~~~ 176 (183)
T TIGR01509 143 PDIYLLALKKLGLKPE---ECLFVDDSPAGIEAAKAA 176 (183)
T ss_pred HHHHHHHHHHcCCCcc---eEEEEcCCHHHHHHHHHc
Confidence 6778999999998764 899999999887766665
No 242
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=64.27 E-value=5.7 Score=33.98 Aligned_cols=36 Identities=25% Similarity=0.335 Sum_probs=28.5
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
-|...++.+++.+|++.+ ++++|||+..|..+=+.+
T Consensus 102 P~~~~~~~~~~~~~~~~~---e~i~IGDs~~Di~~A~~~ 137 (147)
T TIGR01656 102 PKPGLILEALKRLGVDAS---RSLVVGDRLRDLQAARNA 137 (147)
T ss_pred CCHHHHHHHHHHcCCChH---HEEEEcCCHHHHHHHHHC
Confidence 467788999999998765 899999998876555444
No 243
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=64.12 E-value=4.3 Score=36.88 Aligned_cols=65 Identities=22% Similarity=0.354 Sum_probs=43.8
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCc-eEEEeeCCCCC-----ccceEEeCChhHHHHHHHH
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHG-YGILVSSVPKE-----SKAFYSLRDPSEVMEFLKS 375 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g-~~V~v~n~~~~-----t~A~y~l~~~~eV~~~L~~ 375 (385)
-..-+.+++.+|++++ .+++|||+. ||+..-+.+ | .+|.+...... ....+.+.+..++.+.+.+
T Consensus 157 ~~~f~~~~~~~g~~p~---~~l~VgD~~~~di~gA~~~-----G~~~vwi~~~~~~~~~~~~~~~~~i~~l~~l~~~~~~ 228 (229)
T COG1011 157 PEIFEYALEKLGVPPE---EALFVGDSLENDILGARAL-----GMKTVWINRGGKPLPDALEAPDYEISSLAELLDLLER 228 (229)
T ss_pred cHHHHHHHHHcCCCcc---eEEEECCChhhhhHHHHhc-----CcEEEEECCCCCCCCCCccCCceEEcCHHHHHHHHhh
Confidence 3566889999999864 899999965 674555555 4 35555432211 4567777888888777754
No 244
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=64.10 E-value=9.2 Score=32.04 Aligned_cols=35 Identities=14% Similarity=0.188 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHcC--CCCCCCceEEEEeCCCCCHHHHHH
Q 016649 301 DKGKAVMFLLESLG--LNNCEDVLPIYVGDDRTDEDAFKE 338 (385)
Q Consensus 301 nKG~Al~~Ll~~lg--~~~~~~~~vi~~GD~~nDe~mfk~ 338 (385)
.|...+..+++.+| ++.+ .+++|||+..|.+-++.
T Consensus 90 pkp~~~~~a~~~lg~~~~p~---~~l~igDs~~n~~~~~~ 126 (128)
T TIGR01681 90 PKSPRLVEIALKLNGVLKPK---SILFVDDRPDNNEEVDY 126 (128)
T ss_pred cHHHHHHHHHHHhcCCCCcc---eEEEECCCHhHHHHHHh
Confidence 57889999999999 8765 89999999998665543
No 245
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=63.33 E-value=6.3 Score=34.52 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=20.0
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF 156 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~ 156 (385)
+++||+||||++. .+...++++++.+..
T Consensus 1 ~iiFD~DGTL~ds---------~~~~~~~~~~~~~~~ 28 (185)
T TIGR01990 1 AVIFDLDGVITDT---------AEYHYLAWKALADEL 28 (185)
T ss_pred CeEEcCCCccccC---------hHHHHHHHHHHHHHc
Confidence 3789999999983 245566777776653
No 246
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=63.09 E-value=4.2 Score=36.53 Aligned_cols=14 Identities=36% Similarity=0.591 Sum_probs=10.5
Q ss_pred CEE-EEEecCCccCC
Q 016649 118 RIA-LFLDYDGTLSP 131 (385)
Q Consensus 118 ~~l-i~lD~DGTL~~ 131 (385)
|++ |++|+||||++
T Consensus 1 ~~i~I~iDiDgVLad 15 (191)
T PF06941_consen 1 RKIRIAIDIDGVLAD 15 (191)
T ss_dssp --EEEEEESBTTTB-
T ss_pred CCcEEEEECCCCCcc
Confidence 456 99999999998
No 247
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=62.76 E-value=4.5 Score=36.37 Aligned_cols=48 Identities=2% Similarity=0.172 Sum_probs=26.3
Q ss_pred CCCCHHHHHHHHh-CC--CceEEEeeCCCCC-------ccceEEeCChhHHHHHHHHH
Q 016649 329 DRTDEDAFKELRE-GN--HGYGILVSSVPKE-------SKAFYSLRDPSEVMEFLKSF 376 (385)
Q Consensus 329 ~~nDe~mfk~~~~-~~--~g~~V~v~n~~~~-------t~A~y~l~~~~eV~~~L~~L 376 (385)
.--|-++|..+-+ .+ ..-.+.++..... -.....+.++..+.+.|+.+
T Consensus 140 ~KP~p~~~~~~~~~~~~~p~~~l~vgD~~~di~aA~~aG~~~i~~~~~~~~~~~l~~~ 197 (199)
T PRK09456 140 RKPEARIYQHVLQAEGFSAADAVFFDDNADNIEAANALGITSILVTDKQTIPDYFAKV 197 (199)
T ss_pred CCCCHHHHHHHHHHcCCChhHeEEeCCCHHHHHHHHHcCCEEEEecCCccHHHHHHhc
Confidence 3468888876543 22 1235667754321 11223346777777777765
No 248
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=62.72 E-value=23 Score=31.97 Aligned_cols=48 Identities=19% Similarity=0.050 Sum_probs=30.8
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCC---CCHHHHHHHHhCC---CceEEEeeCC
Q 016649 305 AVMFLLESLGLNNCEDVLPIYVGDDR---TDEDAFKELREGN---HGYGILVSSV 353 (385)
Q Consensus 305 Al~~Ll~~lg~~~~~~~~vi~~GD~~---nDe~mfk~~~~~~---~g~~V~v~n~ 353 (385)
..+..++.+|+.. -.+.++..++-. =|-.+|+.+-+.- ..-.+.||..
T Consensus 127 ~~~~~l~~~gl~~-~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~~l~VgD~ 180 (229)
T COG1011 127 HQERKLRQLGLLD-YFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEEALFVGDS 180 (229)
T ss_pred HHHHHHHHcCChh-hhheEEEecccccCCCCcHHHHHHHHHcCCCcceEEEECCC
Confidence 3467778888654 356777777733 4999998876531 1235666653
No 249
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=62.20 E-value=31 Score=32.73 Aligned_cols=35 Identities=17% Similarity=0.425 Sum_probs=29.0
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHH
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAF 336 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mf 336 (385)
|.+||.++..+++.+|..++ .+|+|-|+...+.-.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk---~IIfIDD~~~nl~sv 194 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPK---KIIFIDDNKENLKSV 194 (252)
T ss_pred CCccHHHHHHHHHHcCCCCC---eEEEEeCCHHHHHHH
Confidence 88999999999999998765 899999987554433
No 250
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=61.73 E-value=7.8 Score=33.88 Aligned_cols=28 Identities=21% Similarity=0.264 Sum_probs=19.5
Q ss_pred EEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 119 IALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
++|+||+||||++.. +...++++++.+.
T Consensus 2 ~~iiFD~DGTL~ds~---------~~~~~~~~~~~~~ 29 (185)
T TIGR02009 2 KAVIFDMDGVIVDTA---------PLHAQAWKHLADK 29 (185)
T ss_pred CeEEEcCCCcccCCh---------HHHHHHHHHHHHH
Confidence 578999999999941 3445566665554
No 251
>PLN02811 hydrolase
Probab=60.56 E-value=15 Score=33.50 Aligned_cols=44 Identities=9% Similarity=0.040 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHcC---CCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeC
Q 016649 302 KGKAVMFLLESLG---LNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSS 352 (385)
Q Consensus 302 KG~Al~~Ll~~lg---~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n 352 (385)
+.......++.++ ++.+ .+++|||+..|..+=+.+. -.+|.+..
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~---~~v~IgDs~~di~aA~~aG----~~~i~v~~ 185 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPG---KVLVFEDAPSGVEAAKNAG----MSVVMVPD 185 (220)
T ss_pred CcHHHHHHHHHhCCCCCCcc---ceEEEeccHhhHHHHHHCC----CeEEEEeC
Confidence 4557788888886 7654 8999999999987777762 24555543
No 252
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=59.86 E-value=9.8 Score=35.40 Aligned_cols=69 Identities=17% Similarity=0.189 Sum_probs=45.3
Q ss_pred eEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCCccceEEeCChhHH
Q 016649 290 KVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKESKAFYSLRDPSEV 369 (385)
Q Consensus 290 ~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A~y~l~~~~eV 369 (385)
+-+--.|. -.|.++..+..|+.. +..+++|-||.+-+..=+.+ +-.+|.++...+...++|.|......
T Consensus 155 ~~~vcKP~-----~~afE~a~k~agi~~--p~~t~FfDDS~~NI~~ak~v----Gl~tvlv~~~~~~~~~d~~l~~ih~~ 223 (244)
T KOG3109|consen 155 KTVVCKPS-----EEAFEKAMKVAGIDS--PRNTYFFDDSERNIQTAKEV----GLKTVLVGREHKIKGVDYALEQIHNN 223 (244)
T ss_pred CceeecCC-----HHHHHHHHHHhCCCC--cCceEEEcCchhhHHHHHhc----cceeEEEEeeecccchHHHHHHhhch
Confidence 33444455 468899999999973 35899999998876554444 12577777555545666666544333
No 253
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=59.67 E-value=42 Score=37.27 Aligned_cols=34 Identities=6% Similarity=0.108 Sum_probs=29.3
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+-|+++++++..+..+ +|-.+||-.....+.+..
T Consensus 648 vRPgV~~AV~~Cq~AGItVRMVTGDNI~TAkAIA~ 682 (1034)
T KOG0204|consen 648 VRPGVPEAVQLCQRAGITVRMVTGDNINTAKAIAR 682 (1034)
T ss_pred CCCCcHHHHHHHHHcCcEEEEEeCCcHHHHHHHHH
Confidence 5689999999999987 999999999888877653
No 254
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=59.23 E-value=15 Score=38.97 Aligned_cols=59 Identities=8% Similarity=0.176 Sum_probs=45.9
Q ss_pred cCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCC
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGL 175 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~ 175 (385)
+....+++++.||+++..-. -...+.+++.++|++|.+.+ +++|+||.+...++.+.+.
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~--~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFA--LEDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred hCCCEEEEEEECCEEEEEEE--ecccccHHHHHHHHHHHHcCCeEEEEcCCCHHHHHHHHHH
Confidence 34457788899999976321 12346789999999999986 8999999999988887753
No 255
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=59.18 E-value=12 Score=35.30 Aligned_cols=34 Identities=35% Similarity=0.427 Sum_probs=26.8
Q ss_pred hCCCCCCcHHHHHHHhcCCCEEEEEecCCccCCC
Q 016649 99 QYPSALTSFEQILKSAKGKRIALFLDYDGTLSPI 132 (385)
Q Consensus 99 ~~~~~L~~~~~~~~~~~~k~~li~lD~DGTL~~~ 132 (385)
.|-+|=..|+...+..++|++.|++|+|-|.++-
T Consensus 60 ~yn~Ak~~~d~~~k~~k~K~~aVvlDlDETvLdN 93 (274)
T COG2503 60 AYNSAKIALDTQAKKKKGKKKAVVLDLDETVLDN 93 (274)
T ss_pred HhhhHHHHHHhhhccccCCCceEEEecchHhhcC
Confidence 3555555567666788999999999999999983
No 256
>PRK08238 hypothetical protein; Validated
Probab=59.10 E-value=8.1 Score=40.22 Aligned_cols=42 Identities=26% Similarity=0.334 Sum_probs=29.8
Q ss_pred CCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCC
Q 016649 300 WDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVP 354 (385)
Q Consensus 300 ~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~ 354 (385)
-.|... +.+.++.. ...++||+.+|.+|++.+ |.+|+|+..+
T Consensus 127 ~~K~~~---l~~~l~~~-----~~~yvGDS~~Dlp~~~~A-----~~av~Vn~~~ 168 (479)
T PRK08238 127 AAKAAA---LVEAFGER-----GFDYAGNSAADLPVWAAA-----RRAIVVGASP 168 (479)
T ss_pred chHHHH---HHHHhCcc-----CeeEecCCHHHHHHHHhC-----CCeEEECCCH
Confidence 346544 44555532 367889999999999999 5788887543
No 257
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=58.72 E-value=25 Score=32.79 Aligned_cols=55 Identities=18% Similarity=0.199 Sum_probs=36.3
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcC--CChhHHHHHhC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISG--RSRDKVYEFVG 174 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG--R~~~~l~~~~~ 174 (385)
...|.+.-+.+++.|+|||+... +...+.++++++.. .-++++| |+.+.++.++.
T Consensus 36 a~~~~~~~~~l~ivDldga~~g~----------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~~ 93 (228)
T PRK04128 36 ALRFSEYVDKIHVVDLDGAFEGK----------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAYE 93 (228)
T ss_pred HHHHHHhCCEEEEEECcchhcCC----------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHH
Confidence 33444335678889999999873 23466777887764 3345555 66778888775
No 258
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=58.37 E-value=13 Score=36.57 Aligned_cols=42 Identities=12% Similarity=0.096 Sum_probs=31.7
Q ss_pred cCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc-C----CEEEEc
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY-F----PTAIIS 162 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~----~v~I~S 162 (385)
..+..-|+||+||.|+.- ..+-++..++|+.|.++ + ++++.|
T Consensus 32 s~~~fgfafDIDGVL~RG------~~~i~~~~~Alr~L~~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 32 SPPTFGFAFDIDGVLFRG------HRPIPGALKALRRLVDNQGQLKIPFVFLT 78 (389)
T ss_pred CCCceeEEEecccEEEec------CCCCcchHHHHHHHHhcCCCeeccEEEEe
Confidence 344677899999999983 34567889999999987 2 666665
No 259
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=58.15 E-value=14 Score=35.28 Aligned_cols=43 Identities=23% Similarity=0.193 Sum_probs=31.5
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCC-CCCHHHHHHHHhCCCc-eEEEeeCC
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDD-RTDEDAFKELREGNHG-YGILVSSV 353 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~-~nDe~mfk~~~~~~~g-~~V~v~n~ 353 (385)
...++.+++.+|++.+ .+++|||+ .+|+.+=+.+ | -+|.|..+
T Consensus 205 p~~~~~~~~~~~~~~~---~~lmIGD~~~tDI~~A~~a-----Gi~si~V~~G 249 (279)
T TIGR01452 205 PYMFECITENFSIDPA---RTLMVGDRLETDILFGHRC-----GMTTVLVLSG 249 (279)
T ss_pred HHHHHHHHHHhCCChh---hEEEECCChHHHHHHHHHc-----CCcEEEECCC
Confidence 4467888899998765 89999999 5998776655 4 35566443
No 260
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=57.77 E-value=8.6 Score=32.63 Aligned_cols=36 Identities=33% Similarity=0.369 Sum_probs=30.6
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
.+..+.+.+++.+|++++ .+++|||+..|..+-+.+
T Consensus 134 p~~~~~~~~~~~~~~~p~---~~~~vgD~~~d~~~A~~~ 169 (176)
T PF13419_consen 134 PDPDAYRRALEKLGIPPE---EILFVGDSPSDVEAAKEA 169 (176)
T ss_dssp TSHHHHHHHHHHHTSSGG---GEEEEESSHHHHHHHHHT
T ss_pred hHHHHHHHHHHHcCCCcc---eEEEEeCCHHHHHHHHHc
Confidence 456889999999999764 899999999998777766
No 261
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=57.50 E-value=18 Score=31.36 Aligned_cols=12 Identities=33% Similarity=0.681 Sum_probs=10.8
Q ss_pred EEEecCCccCCC
Q 016649 121 LFLDYDGTLSPI 132 (385)
Q Consensus 121 i~lD~DGTL~~~ 132 (385)
++||+||||++.
T Consensus 2 vlFDlDgtLv~~ 13 (183)
T TIGR01509 2 ILFDLDGVLVDT 13 (183)
T ss_pred eeeccCCceech
Confidence 789999999994
No 262
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=56.86 E-value=13 Score=39.86 Aligned_cols=77 Identities=12% Similarity=0.070 Sum_probs=52.3
Q ss_pred CCCEEEEEecCCccCCCCCCCCcccC--------CHHHHHHHHHHHhcC-CEEEEcCCChhHHHH---HhC-CcCceEEe
Q 016649 116 GKRIALFLDYDGTLSPIVDNPDCAFM--------SDAMRAVVKNVAKYF-PTAIISGRSRDKVYE---FVG-LAELYYAG 182 (385)
Q Consensus 116 ~k~~li~lD~DGTL~~~~~~p~~~~i--------s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~---~~~-~~~l~~ia 182 (385)
-..++|+.|+|||++-.+- --+.+ ...+.+...++.+++ +++.+|.|......- ++. +...+.+.
T Consensus 528 Wn~kIVISDIDGTITKSDv--LGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~L 605 (738)
T KOG2116|consen 528 WNDKIVISDIDGTITKSDV--LGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAIGQADSTRQYLKNVEQDGKKL 605 (738)
T ss_pred cCCcEEEecCCCceEhhhh--hhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccC
Confidence 3457899999999997311 01111 345666777778887 899999999876543 443 44556777
Q ss_pred cCceeEeCCCCC
Q 016649 183 SHGMDIMGPVRQ 194 (385)
Q Consensus 183 enG~~I~~~~~~ 194 (385)
-+|=.|..|++.
T Consensus 606 PdGPViLSPd~l 617 (738)
T KOG2116|consen 606 PDGPVILSPDSL 617 (738)
T ss_pred CCCCEEeCCCcc
Confidence 777777777754
No 263
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=56.29 E-value=26 Score=30.77 Aligned_cols=45 Identities=31% Similarity=0.285 Sum_probs=33.8
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCc-eEEEeeCC
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHG-YGILVSSV 353 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g-~~V~v~n~ 353 (385)
-+...++.+++.++++.+ .+++|||+. +|+.+=+.+ | .+|.+..+
T Consensus 92 P~p~~~~~~l~~~~~~~~---~~l~IGDs~~~Di~aA~~a-----Gi~~i~v~~g 138 (170)
T TIGR01668 92 PPGCAFRRAHPEMGLTSE---QVAVVGDRLFTDVMGGNRN-----GSYTILVEPL 138 (170)
T ss_pred CChHHHHHHHHHcCCCHH---HEEEECCcchHHHHHHHHc-----CCeEEEEccC
Confidence 457789999999998764 899999997 797766555 4 45566433
No 264
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=55.82 E-value=9.2 Score=38.40 Aligned_cols=79 Identities=19% Similarity=0.215 Sum_probs=47.7
Q ss_pred hcCCCEEEEEecCCccCCCC------CCCCc-ccCCHHHHHHHHHHHhcC-CEEEEcC-----CCh-------hHHHHHh
Q 016649 114 AKGKRIALFLDYDGTLSPIV------DNPDC-AFMSDAMRAVVKNVAKYF-PTAIISG-----RSR-------DKVYEFV 173 (385)
Q Consensus 114 ~~~k~~li~lD~DGTL~~~~------~~p~~-~~is~~~~~aL~~L~~~~-~v~I~SG-----R~~-------~~l~~~~ 173 (385)
.++..+++.|||||||..-. .+|.+ ..+.++.-.-|+.|.+++ .++|.|- |.. .++..++
T Consensus 71 v~~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~r~~~~~~~f~~Ki~~i~ 150 (422)
T KOG2134|consen 71 VNGGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIARGKLELEEFKKKIKAIV 150 (422)
T ss_pred cCCCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecccccccCcchHHHHHHHHHHHH
Confidence 35567889999999999732 22333 234567777888898886 6666653 222 1223333
Q ss_pred ---CCcCceEEecCceeEeCCC
Q 016649 174 ---GLAELYYAGSHGMDIMGPV 192 (385)
Q Consensus 174 ---~~~~l~~iaenG~~I~~~~ 192 (385)
++|--.+++..+..++-|.
T Consensus 151 anl~vPi~~~~A~~~~~yRKP~ 172 (422)
T KOG2134|consen 151 ANLGVPIQLLAAIIKGKYRKPS 172 (422)
T ss_pred HhcCCceEEeeeccCCcccCcc
Confidence 3454456666666666664
No 265
>cd02966 TlpA_like_family TlpA-like family; composed of TlpA, ResA, DsbE and similar proteins. TlpA, ResA and DsbE are bacterial protein disulfide reductases with important roles in cytochrome maturation. They are membrane-anchored proteins with a soluble TRX domain containing a CXXC motif located in the periplasm. The TRX domains of this family contain an insert, approximately 25 residues in length, which correspond to an extra alpha helix and a beta strand when compared with TRX. TlpA catalyzes an essential reaction in the biogenesis of cytochrome aa3, while ResA and DsbE are essential proteins in cytochrome c maturation. Also included in this family are proteins containing a TlpA-like TRX domain with domain architectures similar to E. coli DipZ protein, and the N-terminal TRX domain of PilB protein from Neisseria which acts as a disulfide reductase that can recylce methionine sulfoxide reductases.
Probab=55.31 E-value=26 Score=27.10 Aligned_cols=81 Identities=12% Similarity=0.229 Sum_probs=44.1
Q ss_pred hHHHHhCCCCCCcHHHHH-HHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHH
Q 016649 94 RTWQRQYPSALTSFEQIL-KSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEF 172 (385)
Q Consensus 94 ~~w~~~~~~~L~~~~~~~-~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~ 172 (385)
..|+......+..+.++. .+.+.+-.++.+++|+. .+ ++..+.+++.. .++.+.++.. ..+.+.
T Consensus 28 ~~~C~~C~~~~~~l~~~~~~~~~~~~~~~~v~~d~~-~~-----------~~~~~~~~~~~--~~~~~~~~~~-~~~~~~ 92 (116)
T cd02966 28 ASWCPPCRAEMPELEALAKEYKDDGVEVVGVNVDDD-DP-----------AAVKAFLKKYG--ITFPVLLDPD-GELAKA 92 (116)
T ss_pred cccChhHHHHhHHHHHHHHHhCCCCeEEEEEECCCC-CH-----------HHHHHHHHHcC--CCcceEEcCc-chHHHh
Confidence 457766666666666665 45445567788888755 11 34444444443 2344444442 234444
Q ss_pred hC---CcCceEEecCceeEe
Q 016649 173 VG---LAELYYAGSHGMDIM 189 (385)
Q Consensus 173 ~~---~~~l~~iaenG~~I~ 189 (385)
++ .|.++++-.+|-.++
T Consensus 93 ~~~~~~P~~~l~d~~g~v~~ 112 (116)
T cd02966 93 YGVRGLPTTFLIDRDGRIRA 112 (116)
T ss_pred cCcCccceEEEECCCCcEEE
Confidence 44 455666666665443
No 266
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=55.17 E-value=14 Score=38.77 Aligned_cols=42 Identities=26% Similarity=0.268 Sum_probs=30.1
Q ss_pred CCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeC
Q 016649 299 DWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSS 352 (385)
Q Consensus 299 g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n 352 (385)
|-.|-.+++ +.+|.+.. .++.||+.+|.+||+.+ +.+++|+.
T Consensus 174 Ge~Kv~rl~---~~~g~~~~----~~aYgDS~sD~plL~~a-----~e~y~V~~ 215 (497)
T PLN02177 174 GDHKRDAVL---KEFGDALP----DLGLGDRETDHDFMSIC-----KEGYMVPR 215 (497)
T ss_pred cHHHHHHHH---HHhCCCCc----eEEEECCccHHHHHHhC-----CccEEeCC
Confidence 334666666 55564432 28999999999999998 56777765
No 267
>PHA02597 30.2 hypothetical protein; Provisional
Probab=55.04 E-value=16 Score=32.46 Aligned_cols=15 Identities=27% Similarity=0.437 Sum_probs=12.9
Q ss_pred CEEEEEecCCccCCC
Q 016649 118 RIALFLDYDGTLSPI 132 (385)
Q Consensus 118 ~~li~lD~DGTL~~~ 132 (385)
.++|+||+||||+++
T Consensus 2 ~k~viFDlDGTLiD~ 16 (197)
T PHA02597 2 KPTILTDVDGVLLSW 16 (197)
T ss_pred CcEEEEecCCceEch
Confidence 367899999999995
No 268
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=54.96 E-value=26 Score=34.25 Aligned_cols=36 Identities=14% Similarity=0.230 Sum_probs=31.7
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
.|...+..+++.+|+..+ .+++|||+..|..+-+..
T Consensus 87 pk~~~i~~~~~~l~i~~~---~~vfidD~~~d~~~~~~~ 122 (320)
T TIGR01686 87 PKSESLRKIAKKLNLGTD---SFLFIDDNPAERANVKIT 122 (320)
T ss_pred chHHHHHHHHHHhCCCcC---cEEEECCCHHHHHHHHHH
Confidence 799999999999998765 899999999988777664
No 269
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=54.92 E-value=13 Score=33.21 Aligned_cols=36 Identities=8% Similarity=0.049 Sum_probs=21.2
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeC---CCCCHHHHHHHH
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGD---DRTDEDAFKELR 340 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD---~~nDe~mfk~~~ 340 (385)
..++.+++.+|+... .+.+++.++ ..-|-++|..+-
T Consensus 120 ~~~~~~l~~~gl~~~-fd~i~~s~~~~~~KP~~~~~~~~~ 158 (198)
T TIGR01428 120 AMLKSLVKHAGLDDP-FDAVLSADAVRAYKPAPQVYQLAL 158 (198)
T ss_pred HHHHHHHHHCCChhh-hheeEehhhcCCCCCCHHHHHHHH
Confidence 346777888887532 234444333 235888887764
No 270
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=53.45 E-value=27 Score=31.37 Aligned_cols=14 Identities=36% Similarity=0.698 Sum_probs=12.3
Q ss_pred EEEEEecCCccCCC
Q 016649 119 IALFLDYDGTLSPI 132 (385)
Q Consensus 119 ~li~lD~DGTL~~~ 132 (385)
+.|+||+||||++.
T Consensus 3 k~viFDldGtL~d~ 16 (211)
T TIGR02247 3 KAVIFDFGGVLLPS 16 (211)
T ss_pred eEEEEecCCceecC
Confidence 57999999999993
No 271
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=51.73 E-value=15 Score=32.30 Aligned_cols=30 Identities=23% Similarity=0.286 Sum_probs=20.9
Q ss_pred CCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 117 KRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
+.++++||+||||++. . +...++++++.+.
T Consensus 4 ~~~~viFD~DGTLiDs-----~----~~~~~a~~~~~~~ 33 (188)
T PRK10725 4 RYAGLIFDMDGTILDT-----E----PTHRKAWREVLGR 33 (188)
T ss_pred cceEEEEcCCCcCccC-----H----HHHHHHHHHHHHH
Confidence 4578999999999993 1 3445566666554
No 272
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=51.19 E-value=7.5 Score=44.54 Aligned_cols=60 Identities=13% Similarity=0.138 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCc-eEEEeeCCCC-----CccceEEeCChhHH
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHG-YGILVSSVPK-----ESKAFYSLRDPSEV 369 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g-~~V~v~n~~~-----~t~A~y~l~~~~eV 369 (385)
+......+++.+|++.+ .+++|||+.+|..+=+.+ | ..|.+..+.. ...|.+++++..++
T Consensus 220 ~Pe~~~~a~~~lgv~p~---e~v~IgDs~~Di~AA~~a-----Gm~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKILGVPTS---ECVVIEDALAGVQAARAA-----GMRCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHcCcCcc---cEEEEcCCHHHHHHHHHc-----CCEEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 46778899999998765 899999999987766665 4 3555654321 24677888888875
No 273
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=51.13 E-value=2.5 Score=43.64 Aligned_cols=46 Identities=4% Similarity=0.097 Sum_probs=35.0
Q ss_pred ccccccch--------HHHHhcCCCcccccccc-cCcccCccccchhHhHHHHhCCCCC
Q 016649 55 DDVRACSW--------LDAMKSSSPPPKWMAKE-SNNEFSSTDTDVAYRTWQRQYPSAL 104 (385)
Q Consensus 55 ~~~~~n~w--------~~~~~~~s~~~~~~~~~-~~~~~~~~~~~~~~~~w~~~~~~~L 104 (385)
..++|||| |..+++|++++++.++. ... .+..++...|+.++...|
T Consensus 405 ~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~----~v~~~~~~~w~~~~l~~l 459 (460)
T cd03788 405 GALLVNPYDIDEVADAIHRALTMPLEERRERHRKLRE----YVRTHDVQAWANSFLDDL 459 (460)
T ss_pred CCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHH----HHHhCCHHHHHHHHHHhh
Confidence 36899999 77799999888876644 332 567889999998876654
No 274
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=51.09 E-value=15 Score=31.11 Aligned_cols=27 Identities=30% Similarity=0.393 Sum_probs=18.3
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
+|+||+||||++. . +....+++++.+.
T Consensus 1 ~iifD~DGTL~d~-----~----~~~~~~~~~~~~~ 27 (154)
T TIGR01549 1 AILFDIDGTLVDS-----S----FAIRRAFEETLEE 27 (154)
T ss_pred CeEecCCCccccc-----H----HHHHHHHHHHHHH
Confidence 3789999999993 1 3445566666554
No 275
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=50.14 E-value=13 Score=33.19 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=20.4
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeCC--CCCHHHHHHHH
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGDD--RTDEDAFKELR 340 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD~--~nDe~mfk~~~ 340 (385)
..++.+++.+|+... .+.+++..|. .-+-++|..+-
T Consensus 134 ~~~~~~l~~~gl~~~-f~~~~~~~~~~~KP~p~~~~~~~ 171 (197)
T TIGR01548 134 KDAAKFLTTHGLEIL-FPVQIWMEDCPPKPNPEPLILAA 171 (197)
T ss_pred HHHHHHHHHcCchhh-CCEEEeecCCCCCcCHHHHHHHH
Confidence 456888999998642 3334433332 24566665543
No 276
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=49.93 E-value=14 Score=37.66 Aligned_cols=79 Identities=14% Similarity=0.181 Sum_probs=42.8
Q ss_pred cCCCEEEEEecCCccCCCCCCCC-cccC-----CHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHh---C-CcCceEEec
Q 016649 115 KGKRIALFLDYDGTLSPIVDNPD-CAFM-----SDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFV---G-LAELYYAGS 183 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~~~~p~-~~~i-----s~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~---~-~~~l~~iae 183 (385)
+...+++++|+|||++..+.-.. .+.+ +..+...-.+..+++ .+.-.|.|+......-- . +..-++---
T Consensus 372 r~n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~Gqa~sTrsylrnieQngykLp 451 (580)
T COG5083 372 RNNKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSYGQADSTRSYLRNIEQNGYKLP 451 (580)
T ss_pred eCCCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccccchhhhhhHHHhhhhcCccCC
Confidence 45567788999999997311000 0001 222333344445555 78888999987765432 2 122234444
Q ss_pred CceeEeCCCC
Q 016649 184 HGMDIMGPVR 193 (385)
Q Consensus 184 nG~~I~~~~~ 193 (385)
+|-+|..|.+
T Consensus 452 dgpviLspd~ 461 (580)
T COG5083 452 DGPVILSPDR 461 (580)
T ss_pred CCCEeeccch
Confidence 5555665554
No 277
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=49.66 E-value=14 Score=31.65 Aligned_cols=47 Identities=23% Similarity=0.362 Sum_probs=30.9
Q ss_pred EEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCC--hhHHHHH
Q 016649 121 LFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRS--RDKVYEF 172 (385)
Q Consensus 121 i~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~--~~~l~~~ 172 (385)
-++|+||.|+.-. +...+ ..-+.++.+.+.+ +++|+|--. ++.++.+
T Consensus 46 AildL~G~~l~l~---S~R~~--~~~evi~~I~~~G~PviVAtDV~p~P~~V~Ki 95 (138)
T PF04312_consen 46 AILDLDGELLDLK---SSRNM--SRSEVIEWISEYGKPVIVATDVSPPPETVKKI 95 (138)
T ss_pred EEEecCCcEEEEE---eecCC--CHHHHHHHHHHcCCEEEEEecCCCCcHHHHHH
Confidence 4689999999732 12223 3456778888888 899998643 3444444
No 278
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=47.69 E-value=33 Score=37.82 Aligned_cols=66 Identities=6% Similarity=0.084 Sum_probs=49.4
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCCcC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGLAE 177 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~~~ 177 (385)
+..+.....+++++=+||+++.... -.-.+-++..++|++|++.+ +++++||.....+..+.+..+
T Consensus 540 ~~~~~~~g~~~v~va~~~~~~g~i~--l~d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~a~~ia~~lg 606 (741)
T PRK11033 540 INELESAGKTVVLVLRNDDVLGLIA--LQDTLRADARQAISELKALGIKGVMLTGDNPRAAAAIAGELG 606 (741)
T ss_pred HHHHHhCCCEEEEEEECCEEEEEEE--EecCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHcC
Confidence 4456666667788889999875221 11236689999999999986 899999999998888875333
No 279
>COG4996 Predicted phosphatase [General function prediction only]
Probab=47.62 E-value=35 Score=29.27 Aligned_cols=56 Identities=18% Similarity=0.075 Sum_probs=37.8
Q ss_pred EEEEEecCCccCCCCCC----CC---------------cccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 119 IALFLDYDGTLSPIVDN----PD---------------CAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 119 ~li~lD~DGTL~~~~~~----p~---------------~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
++|+||.||||.++.+- |. .-.+-+.+++.++.++..+ .+..+|=.-..+..+.++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecCchHHHHHHHH
Confidence 46899999999874210 10 1123567888888888887 567777777776666554
No 280
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=47.35 E-value=18 Score=40.47 Aligned_cols=61 Identities=25% Similarity=0.301 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCCccceEEeC--ChhHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKESKAFYSLR--DPSEVMEFL 373 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~t~A~y~l~--~~~eV~~~L 373 (385)
.|..-++. ++++|+ .+...||+-||=.++|+|. .||..+.+...-+|.|+-. +-..|...+
T Consensus 840 qK~~Lie~-lQkl~y------~VgfCGDGANDCgALKaAd-----vGISLSeaEASvAApFTSk~~~I~cVp~vI 902 (1140)
T KOG0208|consen 840 QKAELIEA-LQKLGY------KVGFCGDGANDCGALKAAD-----VGISLSEAEASVAAPFTSKTPSISCVPDVI 902 (1140)
T ss_pred hHHHHHHH-HHhcCc------EEEecCCCcchhhhhhhcc-----cCcchhhhhHhhcCccccCCCchhhHhHHH
Confidence 67666554 566665 6899999999999999994 7887875544456777643 555555554
No 281
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=47.31 E-value=65 Score=31.47 Aligned_cols=49 Identities=16% Similarity=0.114 Sum_probs=35.0
Q ss_pred ceEEEEeCCC-CCHHHHHHHHhCCCceEEEeeCCC--CC-----ccceEEeCChhHHHHHH
Q 016649 321 VLPIYVGDDR-TDEDAFKELREGNHGYGILVSSVP--KE-----SKAFYSLRDPSEVMEFL 373 (385)
Q Consensus 321 ~~vi~~GD~~-nDe~mfk~~~~~~~g~~V~v~n~~--~~-----t~A~y~l~~~~eV~~~L 373 (385)
+.+++|||+. +|+.+=+.+ +-.+|+|..+. .+ -.++|++++..++..+|
T Consensus 264 ~~~~mIGD~~~tDI~ga~~~----G~~silV~tG~~~~~~~~~~~~p~~vv~~l~e~~~~i 320 (321)
T TIGR01456 264 HALYMVGDNPASDIIGAQNY----GWFSCLVKTGVYNGGDDLKECKPTLIVNDVFDAVTKI 320 (321)
T ss_pred heEEEEcCChhhhhhhHHhC----CceEEEecccccCCCCCCCCCCCCEEECCHHHHHHHh
Confidence 4899999997 998766655 13678886651 11 23678899998888775
No 282
>TIGR00071 hisT_truA pseudouridylate synthase I. universal so far, single copy in all prokaryotes, 3 in yeast. Trusted cutoff for orthology is about 100 based on 1 match only in complete prokaryote with length 200.
Probab=46.80 E-value=22 Score=33.08 Aligned_cols=57 Identities=21% Similarity=0.282 Sum_probs=43.1
Q ss_pred CEEEEEecCCccC-CCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLS-PIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~-~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
+.++.+-||||=. .+..+|+...+-.++.++|.++.....-++.+||.-..|-..-.
T Consensus 2 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~~q 59 (227)
T TIGR00071 2 KIALKIAYDGSNYHGWQRQPNKRTVQGELEKALEAIGKKKITIMSAGRTDKGVHAMGQ 59 (227)
T ss_pred eEEEEEEEcCCCeeEEeECcCCCCHHHHHHHHHHHHhCCCeeEEeeccCcCCcccccc
Confidence 4668889999955 46556666677788889999887655567899999888866544
No 283
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=46.78 E-value=24 Score=30.99 Aligned_cols=36 Identities=11% Similarity=0.076 Sum_probs=22.9
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCC-------CCCHHHHHHHHh
Q 016649 305 AVMFLLESLGLNNCEDVLPIYVGDD-------RTDEDAFKELRE 341 (385)
Q Consensus 305 Al~~Ll~~lg~~~~~~~~vi~~GD~-------~nDe~mfk~~~~ 341 (385)
.++.+++.+|+.. ..+.+++.+|- .-|-++|..+-+
T Consensus 110 ~~~~~l~~~gl~~-~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~ 152 (184)
T TIGR01993 110 HARRALNRLGIED-CFDGIFCFDTANPDYLLPKPSPQAYEKALR 152 (184)
T ss_pred HHHHHHHHcCcHh-hhCeEEEeecccCccCCCCCCHHHHHHHHH
Confidence 4678889988864 23456665553 337778877543
No 284
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=46.62 E-value=21 Score=31.89 Aligned_cols=14 Identities=29% Similarity=0.311 Sum_probs=12.1
Q ss_pred EEEEEecCCccCCC
Q 016649 119 IALFLDYDGTLSPI 132 (385)
Q Consensus 119 ~li~lD~DGTL~~~ 132 (385)
++|+||+||||++.
T Consensus 1 k~viFDlDGTL~d~ 14 (203)
T TIGR02252 1 KLITFDAVGTLLAL 14 (203)
T ss_pred CeEEEecCCceeee
Confidence 46899999999994
No 285
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=44.91 E-value=13 Score=33.63 Aligned_cols=15 Identities=40% Similarity=0.815 Sum_probs=13.2
Q ss_pred CCEEEEEecCCccCC
Q 016649 117 KRIALFLDYDGTLSP 131 (385)
Q Consensus 117 k~~li~lD~DGTL~~ 131 (385)
++-+||+|+|||++-
T Consensus 2 kk~vi~sDFDGTITl 16 (220)
T COG4359 2 KKPVIFSDFDGTITL 16 (220)
T ss_pred CceEEEecCCCceEe
Confidence 567899999999986
No 286
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=44.37 E-value=45 Score=31.25 Aligned_cols=46 Identities=24% Similarity=0.148 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCceEEEeeCC
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHGYGILVSSV 353 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g~~V~v~n~ 353 (385)
-+....+.+++.++++.+ .+++|||+. +|+.+=+.+. -.+|.|..+
T Consensus 179 P~~~~~~~~~~~~~~~~~---~~~~VGD~~~~Di~~a~~~G----~~~v~v~~G 225 (249)
T TIGR01457 179 PNAIIMEKAVEHLGTERE---ETLMVGDNYLTDIRAGIDAG----IDTLLVHTG 225 (249)
T ss_pred ChHHHHHHHHHHcCCCcc---cEEEECCCchhhHHHHHHcC----CcEEEEcCC
Confidence 456788999999998765 899999996 8998877772 236677544
No 287
>COG4483 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=44.22 E-value=15 Score=27.36 Aligned_cols=27 Identities=26% Similarity=0.442 Sum_probs=23.4
Q ss_pred HHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHH
Q 016649 305 AVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKE 338 (385)
Q Consensus 305 Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~ 338 (385)
-|+.+|+.+| .+++|||-.-|++|.+.
T Consensus 6 DVqQlLK~~G-------~ivyfg~r~~~iemm~~ 32 (68)
T COG4483 6 DVQQLLKKFG-------IIVYFGKRLYDIEMMQI 32 (68)
T ss_pred HHHHHHHHCC-------eeeecCCHHHHHHHHHH
Confidence 4788999998 69999999999999765
No 288
>TIGR02399 salt_tol_Pase glucosylglycerol 3-phosphatase. Proteins in this family are glucosylglycerol-phosphate phosphatase, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=43.61 E-value=40 Score=33.45 Aligned_cols=50 Identities=20% Similarity=0.323 Sum_probs=41.6
Q ss_pred hcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCC
Q 016649 114 AKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRS 165 (385)
Q Consensus 114 ~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~ 165 (385)
..++..||+=|+||.=.+-++||-...|.+.-+.+.++|.. .|+|.|--.
T Consensus 4 ~~~~nlLiVQDLDGVCmpLVkDPltR~ld~~Yv~A~~~l~~--~F~VLTnGE 53 (389)
T TIGR02399 4 INTENLLIVQDLDGVCIPLVKDPLTRKLDSKYVFAVKNLEK--EFYVLTNGE 53 (389)
T ss_pred cCCCCeEEEecCCccchhhccCcccccCCHHHHHHHHHhcC--cEEEEeCCc
Confidence 46788999999999999999999888999988888888754 677777543
No 289
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=43.50 E-value=43 Score=29.91 Aligned_cols=36 Identities=14% Similarity=0.236 Sum_probs=23.8
Q ss_pred CHHHHHHHHHHHc------CCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESL------GLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~l------g~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
+|.+-...+++.+ |++. +.+++|||+..|...=+.+
T Consensus 108 ~~~kp~~~i~~~~~~~~~~gl~p---~e~l~VgDs~~di~aA~~a 149 (174)
T TIGR01685 108 NKAKQLEMILQKVNKVDPSVLKP---AQILFFDDRTDNVREVWGY 149 (174)
T ss_pred chHHHHHHHHHHhhhcccCCCCH---HHeEEEcChhHhHHHHHHh
Confidence 4444444444444 4655 4899999999997775554
No 290
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=43.13 E-value=32 Score=30.34 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=29.1
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+-+.+.+.|+.|.+.+ +++|+||.....+..+++
T Consensus 81 ~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~~~l~ 115 (201)
T TIGR01491 81 LRDYAEELVRWLKEKGLKTAIVSGGIMCLAKKVAE 115 (201)
T ss_pred CCccHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 4578899999999886 999999999988888764
No 291
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=41.62 E-value=46 Score=36.26 Aligned_cols=63 Identities=13% Similarity=0.131 Sum_probs=47.4
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+..+++...+.+++-+|++++.... -.-.+-+++++++++|++.+ +++++||-.......+.+
T Consensus 418 ~~~~a~~G~r~l~va~~~~~lG~i~--l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~~ta~~iA~ 481 (675)
T TIGR01497 418 VDQVARQGGTPLVVCEDNRIYGVIY--LKDIVKGGIKERFAQLRKMGIKTIMITGDNRLTAAAIAA 481 (675)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEE--ecccchhHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence 4466666667777788998876321 01135689999999999997 899999999988877654
No 292
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=40.90 E-value=24 Score=30.56 Aligned_cols=27 Identities=30% Similarity=0.411 Sum_probs=18.2
Q ss_pred EEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 120 ALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 120 li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
+|+||+||||++.. +...++++.+.+.
T Consensus 1 ~viFD~DGTL~D~~---------~~~~~~~~~~~~~ 27 (175)
T TIGR01493 1 AMVFDVYGTLVDVH---------GGVRACLAAIAPE 27 (175)
T ss_pred CeEEecCCcCcccH---------HHHHHHHHHhhhh
Confidence 37899999999941 3455566665543
No 293
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=40.35 E-value=27 Score=32.36 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=29.3
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
.+......+++.+|++.+ .+++|||+..|..+=+.+
T Consensus 153 P~p~~y~~i~~~lgv~p~---e~lfVgDs~~Di~AA~~A 188 (220)
T TIGR01691 153 TEAQSYVKIAGQLGSPPR---EILFLSDIINELDAARKA 188 (220)
T ss_pred CCHHHHHHHHHHhCcChh---HEEEEeCCHHHHHHHHHc
Confidence 456678999999999865 899999998887765555
No 294
>COG0101 TruA Pseudouridylate synthase [Translation, ribosomal structure and biogenesis]
Probab=40.07 E-value=38 Score=32.49 Aligned_cols=57 Identities=23% Similarity=0.277 Sum_probs=43.4
Q ss_pred CEEEEEecCCccCC-CCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSP-IVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
+..+-+-||||-.. +...|+...+-.++.++|.++.....-++++||.-..|-..-+
T Consensus 3 ri~l~iaYdGt~f~G~Q~Qp~~~TVQ~~le~aL~~i~~~~~~i~~AGRTD~GVHA~gq 60 (266)
T COG0101 3 RIALKIAYDGTRFHGWQRQPNVRTVQGELEKALSKIGGESVRVIGAGRTDAGVHALGQ 60 (266)
T ss_pred eEEEEEEEcCCceeeeccCCCCCCHHHHHHHHHHHhcCCcceeEEecCCCcCcccccc
Confidence 67788999999875 5555666667777888888887665579999999888765543
No 295
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=39.75 E-value=60 Score=31.66 Aligned_cols=47 Identities=11% Similarity=0.102 Sum_probs=35.1
Q ss_pred EEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHh
Q 016649 121 LFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFV 173 (385)
Q Consensus 121 i~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~ 173 (385)
|+||-||-|..- . ..-|.+.+++..|++.+ .++++|-.+....+.++
T Consensus 25 fifDcDGVlW~g-~-----~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~ 72 (306)
T KOG2882|consen 25 FIFDCDGVLWLG-E-----KPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYM 72 (306)
T ss_pred EEEcCCcceeec-C-----CCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHH
Confidence 789999999983 2 23367888888888888 68888877766555544
No 296
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=38.31 E-value=16 Score=31.27 Aligned_cols=30 Identities=20% Similarity=0.059 Sum_probs=23.4
Q ss_pred HHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHH
Q 016649 306 VMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKE 338 (385)
Q Consensus 306 l~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~ 338 (385)
..+.++.+|.+.+ .+++|||+.+|..+.+.
T Consensus 104 ~~k~l~~l~~~p~---~~i~i~Ds~~~~~aa~~ 133 (148)
T smart00577 104 YVKDLSLLGRDLS---NVIIIDDSPDSWPFHPE 133 (148)
T ss_pred EeecHHHcCCChh---cEEEEECCHHHhhcCcc
Confidence 5666778887765 89999999999876544
No 297
>cd00218 GlcAT-I Beta1,3-glucuronyltransferase I (GlcAT-I) is involved in the initial steps of proteoglycan synthesis. Beta1,3-glucuronyltransferase I (GlcAT-I) domain; GlcAT-I is a Key enzyme involved in the initial steps of proteoglycan synthesis. GlcAT-I catalyzes the transfer of a glucuronic acid moiety from the uridine diphosphate-glucuronic acid (UDP-GlcUA) to the common linkage region of trisaccharide Gal-beta-(1-3)-Gal-beta-(1-4)-Xyl of proteoglycans. The enzyme has two subdomains that bind the donor and acceptor substrate separately. The active site is located at the cleft between both subdomains in which the trisaccharide molecule is oriented perpendicular to the UDP. This family has been classified as Glycosyltransferase family 43 (GT-43).
Probab=38.18 E-value=62 Score=30.20 Aligned_cols=44 Identities=25% Similarity=0.374 Sum_probs=30.5
Q ss_pred EcCCCC-CHHHHHHHHHHHcCCCCCCCceEEEEeCCCC--CHHHHHHHHhC
Q 016649 295 RPVIDW-DKGKAVMFLLESLGLNNCEDVLPIYVGDDRT--DEDAFKELREG 342 (385)
Q Consensus 295 ~P~~g~-nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~n--De~mfk~~~~~ 342 (385)
.|. |+ ..-.|+++|-+++.-. .+-++||+|+.| |.+.|+-++.-
T Consensus 73 ~~r-g~~qRn~AL~~ir~~~~~~---~~GVVyFADDdN~Ysl~lF~emR~i 119 (223)
T cd00218 73 KPR-GVEQRNLALRWIREHLSAK---LDGVVYFADDDNTYDLELFEEMRKI 119 (223)
T ss_pred Ccc-cHHHHHHHHHHHHhccccC---cceEEEEccCCCcccHHHHHHHhcc
Confidence 345 33 3447788887776422 236999999887 88889998863
No 298
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=37.73 E-value=38 Score=30.24 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=29.5
Q ss_pred cCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 140 FMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 140 ~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
.+.+.+.+.|++|.+.+ +++|+||.+...+...+.
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~~~l~ 110 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRARSLLE 110 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHHHHHH
Confidence 34578999999999886 999999999888877664
No 299
>cd04256 AAK_P5CS_ProBA AAK_P5CS_ProBA: Glutamate-5-kinase (G5K) domain of the bifunctional delta 1-pyrroline-5-carboxylate synthetase (P5CS), composed of an N-terminal G5K (ProB) and a C-terminal glutamyl 5- phosphate reductase (G5PR, ProA), the first and second enzyme catalyzing proline (and, in mammals, ornithine) biosynthesis. G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, and is subject to feedback allosteric inhibition by proline or ornithine. In plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia.
Probab=37.63 E-value=1e+02 Score=29.79 Aligned_cols=27 Identities=22% Similarity=0.213 Sum_probs=19.0
Q ss_pred HHHhcCCCEEEEEecCCccCCCCCCCC
Q 016649 111 LKSAKGKRIALFLDYDGTLSPIVDNPD 137 (385)
Q Consensus 111 ~~~~~~k~~li~lD~DGTL~~~~~~p~ 137 (385)
...-.....++++|.||-+...+.+|+
T Consensus 188 A~~l~Ad~Li~lTDVdGVy~~dP~~~~ 214 (284)
T cd04256 188 AVELKADLLILLSDVDGLYDGPPGSDD 214 (284)
T ss_pred HHHcCCCEEEEEeCCCeeecCCCCCCC
Confidence 345566778888999999987544443
No 300
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=37.54 E-value=74 Score=27.14 Aligned_cols=54 Identities=11% Similarity=0.034 Sum_probs=39.0
Q ss_pred CEEEEEecCCccCCCCCCCC----cccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHH
Q 016649 118 RIALFLDYDGTLSPIVDNPD----CAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYE 171 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~----~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 171 (385)
.+++.+|+|+|+-|.-.++. ...+-+..+..|.+|.+.+ +.+++|--+..++..
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt~ap~iA~ 76 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRTMAPQIAS 76 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCCCCHHHHH
Confidence 46788899999988543321 2334678889999999997 788888777665544
No 301
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=37.44 E-value=29 Score=29.26 Aligned_cols=35 Identities=17% Similarity=0.262 Sum_probs=29.4
Q ss_pred cCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 140 FMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 140 ~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
.+.+.+.+.|++|++.+ +++|+|+.+...+...+.
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~~~l~ 112 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIERVLE 112 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHHHHHH
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccccccc
Confidence 45678999999999775 999999999998877664
No 302
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=36.26 E-value=38 Score=32.31 Aligned_cols=37 Identities=8% Similarity=-0.049 Sum_probs=27.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
.+...++..++.++.+. +..+++|||+.+|..+-+.+
T Consensus 252 p~p~~~~~~l~~~~~~~--~~~~~~vgD~~~d~~~a~~~ 288 (300)
T PHA02530 252 PDDVVKEEIFWEKIAPK--YDVLLAVDDRDQVVDMWRRI 288 (300)
T ss_pred CcHHHHHHHHHHHhccC--ceEEEEEcCcHHHHHHHHHh
Confidence 34456777777777632 23899999999999998887
No 303
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=35.88 E-value=20 Score=37.48 Aligned_cols=20 Identities=30% Similarity=0.290 Sum_probs=16.2
Q ss_pred hcCCEEEEcCCChhHHHHHh
Q 016649 154 KYFPTAIISGRSRDKVYEFV 173 (385)
Q Consensus 154 ~~~~v~I~SGR~~~~l~~~~ 173 (385)
+++..+|+|+-+...++.+.
T Consensus 121 ~~g~~vvVSASp~~~Vepfa 140 (497)
T PLN02177 121 SFGKRYIITASPRIMVEPFV 140 (497)
T ss_pred hCCCEEEEECCcHHHHHHHH
Confidence 34567999999999888877
No 304
>PRK10671 copA copper exporting ATPase; Provisional
Probab=35.82 E-value=92 Score=34.78 Aligned_cols=79 Identities=11% Similarity=0.134 Sum_probs=52.5
Q ss_pred hHHHHhCCCCCCcHHH-HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHH
Q 016649 94 RTWQRQYPSALTSFEQ-ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYE 171 (385)
Q Consensus 94 ~~w~~~~~~~L~~~~~-~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~ 171 (385)
..|+.+.+-....+.. +..+.+....++++-+||+++....- .-.+-+.+.++|++|.+.+ +++++||.+....+.
T Consensus 605 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~va~~~~~~g~~~l--~d~~r~~a~~~i~~L~~~gi~v~~~Tgd~~~~a~~ 682 (834)
T PRK10671 605 QALLNEQQVDTKALEAEITAQASQGATPVLLAVDGKAAALLAI--RDPLRSDSVAALQRLHKAGYRLVMLTGDNPTTANA 682 (834)
T ss_pred HHHHHHcCCChHHHHHHHHHHHhCCCeEEEEEECCEEEEEEEc--cCcchhhHHHHHHHHHHCCCeEEEEcCCCHHHHHH
Confidence 4466655432222322 33455555677778889998742111 1235678999999999886 899999999988877
Q ss_pred HhC
Q 016649 172 FVG 174 (385)
Q Consensus 172 ~~~ 174 (385)
+..
T Consensus 683 ia~ 685 (834)
T PRK10671 683 IAK 685 (834)
T ss_pred HHH
Confidence 664
No 305
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=35.71 E-value=1.3e+02 Score=24.34 Aligned_cols=36 Identities=19% Similarity=0.345 Sum_probs=29.0
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeC-CCCCHHHHHHHHh
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGD-DRTDEDAFKELRE 341 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD-~~nDe~mfk~~~~ 341 (385)
.|-..+++|++.+.-. ..+.||| +..|.+....+-+
T Consensus 50 ~K~~~i~~i~~~fP~~-----kfiLIGDsgq~DpeiY~~ia~ 86 (100)
T PF09949_consen 50 HKRDNIERILRDFPER-----KFILIGDSGQHDPEIYAEIAR 86 (100)
T ss_pred HHHHHHHHHHHHCCCC-----cEEEEeeCCCcCHHHHHHHHH
Confidence 7999999999987532 6899999 6689998876644
No 306
>PF09506 Salt_tol_Pase: Glucosylglycerol-phosphate phosphatase (Salt_tol_Pase); InterPro: IPR012765 Proteins in this family are glucosylglycerol-phosphate phosphatases, with the gene symbol stpA (Salt Tolerance Protein A). A motif characteristic of acid phosphatases is found, but otherwise this family shows little sequence similarity to other phosphatases. This enzyme acts on the glucosylglycerol phosphate, product of glucosylglycerol phosphate synthase and immediate precursor of the osmoprotectant glucosylglycerol.
Probab=35.17 E-value=69 Score=31.77 Aligned_cols=47 Identities=13% Similarity=0.275 Sum_probs=38.3
Q ss_pred CCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCC
Q 016649 117 KRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRS 165 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~ 165 (385)
+..||+=|+||.=.+-++||-...|.+.-+.+.++|.. .|+|.|--.
T Consensus 1 enlLivQDLDGVCm~LVkDPltR~ld~~Yv~A~~~l~~--~F~VLTnGE 47 (381)
T PF09506_consen 1 ENLLIVQDLDGVCMPLVKDPLTRRLDPDYVRAARQLEG--HFYVLTNGE 47 (381)
T ss_pred CCeeEEecCCccchhhccCccccccCHHHHHHHHHhcC--cEEEEeCCc
Confidence 35789999999999999999888999888888887754 677777543
No 307
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=34.98 E-value=49 Score=28.49 Aligned_cols=34 Identities=18% Similarity=0.089 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+.+.+.+.|+.+.+.+ +++|+||.....++.++.
T Consensus 74 ~~~g~~~~l~~l~~~g~~~~ivS~~~~~~i~~~~~ 108 (177)
T TIGR01488 74 LRPGARELISWLKERGIDTVIVSGGFDFFVEPVAE 108 (177)
T ss_pred cCcCHHHHHHHHHHCCCEEEEECCCcHHHHHHHHH
Confidence 4578899999998886 899999999988888764
No 308
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=34.97 E-value=47 Score=29.63 Aligned_cols=34 Identities=3% Similarity=0.041 Sum_probs=28.9
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+-+.+.++|+.|.+.+ +++|+|+.+...+...+.
T Consensus 86 ~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~~~l~ 120 (213)
T TIGR01449 86 VFPGVEATLGALRAKGLRLGLVTNKPTPLARPLLE 120 (213)
T ss_pred cCCCHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHH
Confidence 4568999999999886 999999999888887764
No 309
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=34.29 E-value=40 Score=33.72 Aligned_cols=36 Identities=19% Similarity=0.160 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
-|-..+..+++.++++.. .+++|||+.+|..+=+.+
T Consensus 105 P~p~~l~~a~~~l~v~~~---~svmIGDs~sDi~aAk~a 140 (354)
T PRK05446 105 PKTGLVEEYLAEGAIDLA---NSYVIGDRETDVQLAENM 140 (354)
T ss_pred CCHHHHHHHHHHcCCCcc---cEEEEcCCHHHHHHHHHC
Confidence 456688888898888765 899999999998776665
No 310
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=33.25 E-value=1.2e+02 Score=27.26 Aligned_cols=78 Identities=18% Similarity=0.183 Sum_probs=45.0
Q ss_pred HHHHHHHHHHHHhCCCcEE---EEe-c-CeEEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHH
Q 016649 266 ATVVQRVHEILKQYPTRLR---LTH-G-RKVLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELR 340 (385)
Q Consensus 266 ~~l~~~v~~~l~~~~~~l~---v~~-g-~~~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~ 340 (385)
....+.+...++..+..+. +.. . ....+-|-+ |.--++..++.++++.. ..++|||..+|+..=..++
T Consensus 70 ~~~~~~m~~~l~~~gv~id~i~~Cph~p~~~c~cRKP----~~gm~~~~~~~~~iD~~---~s~~VGD~~~Dlq~a~n~g 142 (181)
T COG0241 70 DKLHNKMLKILASQGVKIDGILYCPHHPEDNCDCRKP----KPGMLLSALKEYNIDLS---RSYVVGDRLTDLQAAENAG 142 (181)
T ss_pred HHHHHHHHHHHHHcCCccceEEECCCCCCCCCcccCC----ChHHHHHHHHHhCCCcc---ceEEecCcHHHHHHHHHCC
Confidence 3445566777777652232 111 1 111333333 34456777788888765 8999999999976655542
Q ss_pred hCCCceEEEeeCCC
Q 016649 341 EGNHGYGILVSSVP 354 (385)
Q Consensus 341 ~~~~g~~V~v~n~~ 354 (385)
-+ ++.+.++.
T Consensus 143 ---i~-~~~~~~~~ 152 (181)
T COG0241 143 ---IK-GVLVLTGI 152 (181)
T ss_pred ---CC-ceEEEcCc
Confidence 23 66555443
No 311
>PTZ00489 glutamate 5-kinase; Provisional
Probab=32.56 E-value=1.7e+02 Score=27.92 Aligned_cols=22 Identities=18% Similarity=0.246 Sum_probs=16.9
Q ss_pred HHHhcCCCEEEEEecCCccCCC
Q 016649 111 LKSAKGKRIALFLDYDGTLSPI 132 (385)
Q Consensus 111 ~~~~~~k~~li~lD~DGTL~~~ 132 (385)
...-.....++++|.||-+...
T Consensus 157 A~~l~Ad~LiilTDVdGVy~~d 178 (264)
T PTZ00489 157 AHHFKADLLVILSDIDGYYTEN 178 (264)
T ss_pred HHHhCCCEEEEeeccCeeEcCC
Confidence 3455677788899999999854
No 312
>PF13382 Adenine_deam_C: Adenine deaminase C-terminal domain; PDB: 3T8L_B 3T81_A 3NQB_A.
Probab=32.54 E-value=1.4e+02 Score=26.63 Aligned_cols=55 Identities=22% Similarity=0.097 Sum_probs=33.6
Q ss_pred ceEEEEeCCCCCHHHHHHHHhC---CCceEEEeeCCCCCccceEEe--------CChhHHHHHHHHHHHhh
Q 016649 321 VLPIYVGDDRTDEDAFKELREG---NHGYGILVSSVPKESKAFYSL--------RDPSEVMEFLKSFVMWK 380 (385)
Q Consensus 321 ~~vi~~GD~~nDe~mfk~~~~~---~~g~~V~v~n~~~~t~A~y~l--------~~~~eV~~~L~~L~~~~ 380 (385)
.+++++|+ ||++|..++++. +.|+.++ .++ +..|.--| .+.++|.+.++.|.+.-
T Consensus 66 hniiviG~--~~~dm~~A~n~l~~~gGG~vvv-~~g--~v~a~lpLpi~GlmS~~~~eev~~~~~~l~~~~ 131 (171)
T PF13382_consen 66 HNIIVIGT--NDEDMALAANRLIEMGGGIVVV-DDG--EVLAELPLPIAGLMSDLPAEEVARQLEELEEAL 131 (171)
T ss_dssp --EEEEES--SHHHHHHHHHHHHHTTSEEEEE-ETT--EEEEEEE-TBTTTBBSS-HHHHHHHHHHHHHHH
T ss_pred CCEEEEEC--CHHHHHHHHHHHHHhCCCEEEE-ECC--EEEEEEeccccceecCCCHHHHHHHHHHHHHHH
Confidence 38999998 689998888763 5566553 222 22333333 24678888888876543
No 313
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=31.96 E-value=39 Score=29.45 Aligned_cols=43 Identities=12% Similarity=0.198 Sum_probs=31.9
Q ss_pred HHHHHHHHHHHhcC-CEEEEcCCChhHHHHHh---CCcCceEEecCc
Q 016649 143 DAMRAVVKNVAKYF-PTAIISGRSRDKVYEFV---GLAELYYAGSHG 185 (385)
Q Consensus 143 ~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~---~~~~l~~iaenG 185 (385)
+++.+.|+.+.+.+ +++|+||-+...+..++ +++...+++..-
T Consensus 92 ~~~~e~i~~~~~~~~~v~IvS~~~~~~i~~~~~~~~i~~~~v~~~~~ 138 (192)
T PF12710_consen 92 PDAMELIRELKDNGIKVVIVSGSPDEIIEPIAERLGIDDDNVIGNEL 138 (192)
T ss_dssp TTHHHHHHHHHHTTSEEEEEEEEEHHHHHHHHHHTTSSEGGEEEEEE
T ss_pred hhHHHHHHHHHHCCCEEEEECCCcHHHHHHHHHHcCCCceEEEEEee
Confidence 56668999987775 99999999999888886 455444554443
No 314
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=31.39 E-value=58 Score=30.83 Aligned_cols=28 Identities=21% Similarity=0.286 Sum_probs=20.1
Q ss_pred CcHHHHHHHhc--CCCEEEEEecCCccCCC
Q 016649 105 TSFEQILKSAK--GKRIALFLDYDGTLSPI 132 (385)
Q Consensus 105 ~~~~~~~~~~~--~k~~li~lD~DGTL~~~ 132 (385)
.+|+++..+.+ .+..||+||+|.||+..
T Consensus 5 ~s~~eV~~~~~~~~~~tLvvfDiDdTLi~~ 34 (252)
T PF11019_consen 5 YSFHEVQDYLENADQDTLVVFDIDDTLITP 34 (252)
T ss_pred cCHHHHHHHHHcCCCCeEEEEEcchhhhcC
Confidence 34666664443 27899999999999973
No 315
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=31.24 E-value=1.5e+02 Score=26.02 Aligned_cols=50 Identities=16% Similarity=0.228 Sum_probs=38.1
Q ss_pred HHHHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChh
Q 016649 108 EQILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRD 167 (385)
Q Consensus 108 ~~~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~ 167 (385)
+.|.++......+|.+|..|.-.+ |++.-+.|.++...+ .+.++=|-+..
T Consensus 58 ~~il~~i~~~~~vi~Ld~~Gk~~s----------Se~fA~~l~~~~~~G~~i~f~IGG~~G 108 (155)
T COG1576 58 EAILAAIPKGSYVVLLDIRGKALS----------SEEFADFLERLRDDGRDISFLIGGADG 108 (155)
T ss_pred HHHHHhcCCCCeEEEEecCCCcCC----------hHHHHHHHHHHHhcCCeEEEEEeCccc
Confidence 345566666679999999998887 689999999999887 66666565543
No 316
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=30.71 E-value=69 Score=28.34 Aligned_cols=34 Identities=9% Similarity=-0.008 Sum_probs=29.4
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+.+.+.+.|+.+.+++ +++|+||.....+..+..
T Consensus 88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~~~~~ 122 (202)
T TIGR01490 88 LYPEARDLIRWHKAEGHTIVLVSASLTILVKPLAR 122 (202)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHH
Confidence 5689999999999886 999999999888887764
No 317
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=30.19 E-value=79 Score=36.43 Aligned_cols=29 Identities=24% Similarity=0.303 Sum_probs=20.0
Q ss_pred CEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc
Q 016649 118 RIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY 155 (385)
Q Consensus 118 ~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~ 155 (385)
.+.++||+||||++. .+...++++++.+.
T Consensus 75 ikaVIFDlDGTLiDS---------~~~~~~a~~~~~~~ 103 (1057)
T PLN02919 75 VSAVLFDMDGVLCNS---------EEPSRRAAVDVFAE 103 (1057)
T ss_pred CCEEEECCCCCeEeC---------hHHHHHHHHHHHHH
Confidence 467899999999993 13445566666554
No 318
>PF03360 Glyco_transf_43: Glycosyltransferase family 43; InterPro: IPR005027 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 43 GT43 from CAZY comprises enzymes with only one known activities; beta-glucuronyltransferase(2.4.1 from EC);.; GO: 0015018 galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity, 0016020 membrane; PDB: 2D0J_B 3CU0_A 1FGG_B 1KWS_B 1V84_B 1V83_B 1V82_A.
Probab=30.13 E-value=65 Score=29.70 Aligned_cols=43 Identities=23% Similarity=0.343 Sum_probs=23.4
Q ss_pred cCCCC-CHHHHHHHHHHHcCCCCCCCceEEEEeCCCC--CHHHHHHHHhC
Q 016649 296 PVIDW-DKGKAVMFLLESLGLNNCEDVLPIYVGDDRT--DEDAFKELREG 342 (385)
Q Consensus 296 P~~g~-nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~n--De~mfk~~~~~ 342 (385)
|. |+ ..-.|+++|-... ....+=++||+|+.| |..+|+.++.-
T Consensus 56 ~r-g~~qRn~AL~~ir~~~---~~~~~GVVyFaDDdNtYdl~LF~emR~~ 101 (207)
T PF03360_consen 56 PR-GVHQRNAALRWIRNNA---NHRLDGVVYFADDDNTYDLRLFDEMRKT 101 (207)
T ss_dssp -T-SHHHHHHHHHHHHSTT---TSSS-EEEEE--TTSEE-HHHHHHHCT-
T ss_pred cc-cHHHHHHHHHHHHhcc---cCCCCcEEEECCCCCeeeHHHHHHHHhh
Confidence 55 54 3344556555221 122347999999988 99999998764
No 319
>cd04239 AAK_UMPK-like AAK_UMPK-like: UMP kinase (UMPK)-like, the microbial/chloroplast uridine monophosphate kinase (uridylate kinase) enzyme that catalyzes UMP phosphorylation and plays a key role in pyrimidine nucleotide biosynthesis. Regulation of this process is via feed-back control and via gene repression of carbamoyl phosphate synthetase (the first enzyme of the pyrimidine biosynthesis pathway). The UMP kinases of E. coli (Ec) and Pyrococcus furiosus (Pf) are known to function as homohexamers, with GTP and UTP being allosteric effectors. Like other related enzymes (carbamate kinase, aspartokinase, and N-acetylglutamate kinase) the E. coli and most bacterial UMPKs have a conserved, N-terminal, lysine residue proposed to function in the catalysis of the phosphoryl group transfer, whereas most archaeal UMPKs appear to lack this residue and the Pyrococcus furiosus structure has an additional Mg ion bound to the ATP molecule which is proposed to function as the catalysis instead. Als
Probab=29.95 E-value=1.2e+02 Score=28.07 Aligned_cols=65 Identities=14% Similarity=0.168 Sum_probs=40.2
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCC-CCCcccC---C-HHHH---------HHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVD-NPDCAFM---S-DAMR---------AVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~-~p~~~~i---s-~~~~---------~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+...-+.++.+++.|.||-+...++ .|+...+ + +++. .+++.+.+.+ +++|+.|+....+.+++.
T Consensus 141 lA~~l~a~~li~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~~~~~~~~~a~~~~~~~~i~v~I~~g~~~~~l~~~l~ 220 (229)
T cd04239 141 RAEEIGADVLLKATNVDGVYDADPKKNPDAKKYDRISYDELLKKGLKVMDATALTLCRRNKIPIIVFNGLKPGNLLRALK 220 (229)
T ss_pred HHHHcCCCEEEEEECCCcccCCCCCCCCCCeEEeEEcHHHHHHHhcCCccHHHHHHHHHCCCeEEEECCCChhHHHHHHc
Confidence 4455677778889999999976422 2222221 2 2221 2333334444 899999999888888774
No 320
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=29.81 E-value=98 Score=30.07 Aligned_cols=57 Identities=19% Similarity=0.252 Sum_probs=46.6
Q ss_pred EEEEEcCCCCCHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHHHhCCCceEEEeeCC
Q 016649 291 VLEVRPVIDWDKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKELREGNHGYGILVSSV 353 (385)
Q Consensus 291 ~lEI~P~~g~nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~ 353 (385)
.-+.... ..++..=++.|++.+++.. .+|++|-|+.=|.+++.+-.+. ..|++|-|.
T Consensus 79 ~~~~~~~-n~er~~~~~~ll~~l~i~~----~~i~~gHSrGcenal~la~~~~-~~g~~lin~ 135 (297)
T PF06342_consen 79 YPDQQYT-NEERQNFVNALLDELGIKG----KLIFLGHSRGCENALQLAVTHP-LHGLVLINP 135 (297)
T ss_pred CcccccC-hHHHHHHHHHHHHHcCCCC----ceEEEEeccchHHHHHHHhcCc-cceEEEecC
Confidence 3455566 7799999999999999985 6999999999999999987663 467777664
No 321
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=29.07 E-value=93 Score=27.81 Aligned_cols=43 Identities=28% Similarity=0.203 Sum_probs=31.0
Q ss_pred HHHHHHHHHHcCCCCCCCceEEEEeCCC-CCHHHHHHHHhCCCceEEEeeC
Q 016649 303 GKAVMFLLESLGLNNCEDVLPIYVGDDR-TDEDAFKELREGNHGYGILVSS 352 (385)
Q Consensus 303 G~Al~~Ll~~lg~~~~~~~~vi~~GD~~-nDe~mfk~~~~~~~g~~V~v~n 352 (385)
+.|+++.++.++++.+ +++.+||.. ||.=.=..+ +-++|.|..
T Consensus 96 ~~~fr~Al~~m~l~~~---~vvmVGDqL~TDVlggnr~----G~~tIlV~P 139 (175)
T COG2179 96 GRAFRRALKEMNLPPE---EVVMVGDQLFTDVLGGNRA----GMRTILVEP 139 (175)
T ss_pred HHHHHHHHHHcCCChh---HEEEEcchhhhhhhccccc----CcEEEEEEE
Confidence 7899999999999876 899999964 664221111 237888863
No 322
>KOG0209 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=28.42 E-value=44 Score=37.11 Aligned_cols=28 Identities=25% Similarity=0.491 Sum_probs=22.8
Q ss_pred eEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCC
Q 016649 322 LPIYVGDDRTDEDAFKELREGNHGYGILVSSVP 354 (385)
Q Consensus 322 ~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~ 354 (385)
.++..||+-||..++|.++ .||+.=|++
T Consensus 808 ~TLMCGDGTNDVGALK~Ah-----VGVALL~~~ 835 (1160)
T KOG0209|consen 808 VTLMCGDGTNDVGALKQAH-----VGVALLNNP 835 (1160)
T ss_pred EEEEecCCCcchhhhhhcc-----cceehhcCC
Confidence 6789999999999999994 777665543
No 323
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=28.09 E-value=60 Score=28.48 Aligned_cols=34 Identities=24% Similarity=0.287 Sum_probs=25.3
Q ss_pred HHHHHHHHHHcC--CCCCCCceEEEEeCCC--------CCHHHHHHH
Q 016649 303 GKAVMFLLESLG--LNNCEDVLPIYVGDDR--------TDEDAFKEL 339 (385)
Q Consensus 303 G~Al~~Ll~~lg--~~~~~~~~vi~~GD~~--------nDe~mfk~~ 339 (385)
...++.+++.+| ++.+ ++++|||+. +|+.+=+.+
T Consensus 111 p~~~~~~~~~~~~~~~~~---~~v~VGD~~~~~~~~~~~Di~aA~~a 154 (166)
T TIGR01664 111 TGMWEYLQSQYNSPIKMT---RSFYVGDAAGRKLDFSDADIKFAKNL 154 (166)
T ss_pred cHHHHHHHHHcCCCCCch---hcEEEECCCCCCCCCchhHHHHHHHC
Confidence 557889999998 7654 899999985 476554443
No 324
>PRK14588 tRNA pseudouridine synthase ACD; Provisional
Probab=27.92 E-value=70 Score=30.70 Aligned_cols=57 Identities=25% Similarity=0.251 Sum_probs=42.3
Q ss_pred CEEEEEecCCccCC-CCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSP-IVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
+..+.+=||||=.. +...|+...+-.++.++|.++.....-++.+||.-..|-..-.
T Consensus 3 ~~~l~iaYdGt~f~G~Q~Q~~~~TVq~~Le~aL~~l~~~~i~i~~AgRTDaGVHA~gQ 60 (272)
T PRK14588 3 TIALLLEYDGTDFAGSQWQTDGRTVQGALEAAWQALTQERRRIVLAGRTDAGVHARGQ 60 (272)
T ss_pred eEEEEEEEcCCceeeeEECCCCCCHHHHHHHHHHHhhCCCceEEEecCCCcCcCcccc
Confidence 56788899999885 4444555567778888999887654457889999888866544
No 325
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=27.51 E-value=1.7e+02 Score=27.31 Aligned_cols=60 Identities=18% Similarity=0.237 Sum_probs=0.0
Q ss_pred CCCCcHHHHHHHhcCC-CEEEEEec--CCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcC--CChhHHHHHh
Q 016649 102 SALTSFEQILKSAKGK-RIALFLDY--DGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISG--RSRDKVYEFV 173 (385)
Q Consensus 102 ~~L~~~~~~~~~~~~k-~~li~lD~--DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SG--R~~~~l~~~~ 173 (385)
+.++-++-+..+..-. ..++++|+ |||+.. -..+.++++++.. .-+|++| |+.+.+...+
T Consensus 146 ~~~~~~~~~~~~~~~g~~~ii~tdi~~dGt~~G------------~~~~li~~l~~~~~ipvi~~GGi~s~edi~~l~ 211 (234)
T PRK13587 146 TELNLFSFVRQLSDIPLGGIIYTDIAKDGKMSG------------PNFELTGQLVKATTIPVIASGGIRHQQDIQRLA 211 (234)
T ss_pred CCCCHHHHHHHHHHcCCCEEEEecccCcCCCCc------------cCHHHHHHHHHhCCCCEEEeCCCCCHHHHHHHH
No 326
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=26.97 E-value=29 Score=31.01 Aligned_cols=11 Identities=36% Similarity=0.664 Sum_probs=10.3
Q ss_pred EEEecCCccCC
Q 016649 121 LFLDYDGTLSP 131 (385)
Q Consensus 121 i~lD~DGTL~~ 131 (385)
+++|+|||++.
T Consensus 9 ~ciDIDGtit~ 19 (194)
T COG5663 9 CCIDIDGTITD 19 (194)
T ss_pred eeeccCCceec
Confidence 78999999998
No 327
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=26.58 E-value=30 Score=36.28 Aligned_cols=45 Identities=24% Similarity=0.400 Sum_probs=32.6
Q ss_pred eEEEEeCCCCCHHHHHHHHhCCCceEEEeeCCCCC--ccceEE-eC-ChhHHHH
Q 016649 322 LPIYVGDDRTDEDAFKELREGNHGYGILVSSVPKE--SKAFYS-LR-DPSEVME 371 (385)
Q Consensus 322 ~vi~~GD~~nDe~mfk~~~~~~~g~~V~v~n~~~~--t~A~y~-l~-~~~eV~~ 371 (385)
.+...||+-||-+++..+ ..|++|.++... .+|.-+ |+ +|.-+++
T Consensus 511 lVAMtGDGTNDAPALAqA-----dVg~AMNsGTqAAkEAaNMVDLDS~PTKlie 559 (681)
T COG2216 511 LVAMTGDGTNDAPALAQA-----DVGVAMNSGTQAAKEAANMVDLDSNPTKLIE 559 (681)
T ss_pred EEEEcCCCCCcchhhhhc-----chhhhhccccHHHHHhhcccccCCCccceeh
Confidence 788999999999999998 489999877643 344443 43 5654443
No 328
>PRK14558 pyrH uridylate kinase; Provisional
Probab=25.97 E-value=1.5e+02 Score=27.41 Aligned_cols=65 Identities=12% Similarity=0.038 Sum_probs=40.3
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCC-CCCcccC---C-HHHH---------HHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVD-NPDCAFM---S-DAMR---------AVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~-~p~~~~i---s-~~~~---------~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+...-+.+..+++.|.||-...++. +|+...+ + .++. .+++-+.+.+ +++|++|+....+...+.
T Consensus 141 lA~~l~a~~l~~~tdVdGvy~~dP~~~~~a~~i~~i~~~e~~~~g~~~~d~~a~~~a~~~gi~v~I~ng~~~~~l~~~l~ 220 (231)
T PRK14558 141 RAVEMKADILIKATKVDGIYDKDPKKFPDAKKIDHLTFSEAIKMGLKVMDTEAFSICKKYGITILVINFFEPGNLLKALK 220 (231)
T ss_pred HHHHcCCCEEEEEecCCeeEccCCCCCCCCeEcccccHHHHHHcCcccccHHHHHHHHHCCCCEEEEeCCCCCHHHHHHC
Confidence 3356677888889999999986432 2332222 2 1121 2233233444 899999998888877763
No 329
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=25.84 E-value=1.1e+02 Score=26.47 Aligned_cols=37 Identities=11% Similarity=-0.014 Sum_probs=28.9
Q ss_pred CHHHHHHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~~ 339 (385)
=|...++.|++.+.-.. ..++++|||..+|..+++.+
T Consensus 102 ~K~~~l~~i~~~~~~~~--~~f~~~~gn~~~D~~~y~~~ 138 (157)
T smart00775 102 FKIACLRDIKSLFPPQG--NPFYAGFGNRITDVISYSAV 138 (157)
T ss_pred HHHHHHHHHHHhcCCCC--CCEEEEeCCCchhHHHHHHc
Confidence 48889999998765221 23778899999999999997
No 330
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=25.84 E-value=97 Score=32.66 Aligned_cols=56 Identities=9% Similarity=0.091 Sum_probs=43.0
Q ss_pred CCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhc-C-CEEEEcCCChhHHHHHhC
Q 016649 117 KRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKY-F-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 117 k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~-~-~v~I~SGR~~~~l~~~~~ 174 (385)
....+++-.||++..... ....+-+.+.++|++|.+. . +++++||.+...+..+.+
T Consensus 341 ~~~~~~v~~~~~~~g~i~--~~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a~~i~~ 398 (536)
T TIGR01512 341 GKTIVHVARDGTYLGYIL--LSDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVAERVAR 398 (536)
T ss_pred CCeEEEEEECCEEEEEEE--EeccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHHHHHHH
Confidence 345667778888876322 1234678999999999998 5 799999999998888775
No 331
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=25.49 E-value=1.2e+02 Score=33.17 Aligned_cols=62 Identities=11% Similarity=0.095 Sum_probs=45.6
Q ss_pred HHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 111 LKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 111 ~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
..+++...+.+++-+|++++.... -.-.+-+++++++++|++.+ +++++||=.......+-+
T Consensus 418 ~~~a~~G~~~l~va~~~~~lG~i~--l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA~ 480 (679)
T PRK01122 418 DEVARKGGTPLVVAEDNRVLGVIY--LKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA 480 (679)
T ss_pred HHHHhCCCcEEEEEECCeEEEEEE--EeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH
Confidence 355655556677778999886321 01125689999999999987 999999999988877653
No 332
>cd04242 AAK_G5K_ProB AAK_G5K_ProB: Glutamate-5-kinase (G5K) catalyzes glutamate-dependent ATP cleavage; G5K transfers the terminal phosphoryl group of ATP to the gamma-carboxyl group of glutamate, in the first and controlling step of proline (and, in mammals, ornithine) biosynthesis. G5K is subject to feedback allosteric inhibition by proline or ornithine. In microorganisms and plants, proline plays an important role as an osmoprotectant and, in mammals, ornithine biosynthesis is crucial for proper ammonia detoxification, since a G5K mutation has been shown to cause human hyperammonaemia. Microbial G5K generally consists of two domains: a catalytic G5K domain and one PUA (pseudo uridine synthases and archaeosine-specific transglycosylases) domain, and some lack the PUA domain. G5K requires free Mg for activity, it is tetrameric, and it aggregates to higher forms in a proline-dependent way. G5K lacking the PUA domain remains tetrameric, active, and proline-inhibitable, but the Mg requir
Probab=25.39 E-value=97 Score=29.09 Aligned_cols=23 Identities=17% Similarity=0.219 Sum_probs=18.0
Q ss_pred HHHHhcCCCEEEEEecCCccCCC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPI 132 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~ 132 (385)
+...-+..+.+++.|.||-+...
T Consensus 151 lA~~l~Ad~liilTDVdGvy~~d 173 (251)
T cd04242 151 VAGLVNADLLILLSDVDGLYDKN 173 (251)
T ss_pred HHHHcCCCEEEEecCcCEEEeCC
Confidence 44566777888899999999864
No 333
>PRK10886 DnaA initiator-associating protein DiaA; Provisional
Probab=25.32 E-value=2.8e+02 Score=25.17 Aligned_cols=54 Identities=13% Similarity=0.180 Sum_probs=42.5
Q ss_pred HHHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhCC
Q 016649 109 QILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVGL 175 (385)
Q Consensus 109 ~~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~~ 175 (385)
++.++.+....+|++.+.|. ++.+.++++.+.+.+ +++.+||.+-..+.++++.
T Consensus 102 ql~~~~~~gDvli~iS~SG~-------------s~~v~~a~~~Ak~~G~~vI~IT~~~~s~l~~l~~~ 156 (196)
T PRK10886 102 QVRALGHAGDVLLAISTRGN-------------SRDIVKAVEAAVTRDMTIVALTGYDGGELAGLLGP 156 (196)
T ss_pred HHHHcCCCCCEEEEEeCCCC-------------CHHHHHHHHHHHHCCCEEEEEeCCCCChhhhcccc
Confidence 35566777788888877664 478899999999887 8999999988888877643
No 334
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=25.23 E-value=87 Score=29.53 Aligned_cols=43 Identities=28% Similarity=0.384 Sum_probs=31.7
Q ss_pred HHHHHHHHHcCCCCCCCceEEEEeC-CCCCHHHHHHHHhCCCc-eEEEeeCCC
Q 016649 304 KAVMFLLESLGLNNCEDVLPIYVGD-DRTDEDAFKELREGNHG-YGILVSSVP 354 (385)
Q Consensus 304 ~Al~~Ll~~lg~~~~~~~~vi~~GD-~~nDe~mfk~~~~~~~g-~~V~v~n~~ 354 (385)
.--+..++.+|..++ +++.||| -.||...=+.+ | .++.|.|..
T Consensus 172 ~If~~al~~l~v~Pe---e~vhIgD~l~nD~~gA~~~-----G~~ailv~~~~ 216 (237)
T KOG3085|consen 172 RIFQLALERLGVKPE---ECVHIGDLLENDYEGARNL-----GWHAILVDNSI 216 (237)
T ss_pred HHHHHHHHHhCCChH---HeEEecCccccccHhHHHc-----CCEEEEEcccc
Confidence 345777888888765 8999999 45897766665 4 688887643
No 335
>PRK12314 gamma-glutamyl kinase; Provisional
Probab=25.21 E-value=2.4e+02 Score=26.79 Aligned_cols=23 Identities=22% Similarity=0.304 Sum_probs=17.7
Q ss_pred HHHHhcCCCEEEEEecCCccCCC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPI 132 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~ 132 (385)
+...-+....+++.|.||-+...
T Consensus 163 lA~~l~Ad~liilTDVdGVy~~d 185 (266)
T PRK12314 163 VAKLVKADLLIILSDIDGLYDKN 185 (266)
T ss_pred HHHHhCCCEEEEEeCCCcccCCC
Confidence 33455677788899999999864
No 336
>KOG1605 consensus TFIIF-interacting CTD phosphatase, including NLI-interacting factor (involved in RNA polymerase II regulation) [Transcription]
Probab=25.11 E-value=41 Score=32.21 Aligned_cols=18 Identities=39% Similarity=0.338 Sum_probs=15.3
Q ss_pred cCCCEEEEEecCCccCCC
Q 016649 115 KGKRIALFLDYDGTLSPI 132 (385)
Q Consensus 115 ~~k~~li~lD~DGTL~~~ 132 (385)
..+|+.+++|+|.||...
T Consensus 86 ~~~kk~lVLDLDeTLvHs 103 (262)
T KOG1605|consen 86 TVGRKTLVLDLDETLVHS 103 (262)
T ss_pred cCCCceEEEeCCCccccc
Confidence 567888999999999874
No 337
>PRK14586 tRNA pseudouridine synthase ACD; Provisional
Probab=24.71 E-value=99 Score=29.12 Aligned_cols=57 Identities=19% Similarity=0.215 Sum_probs=41.9
Q ss_pred CEEEEEecCCccCC-CCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSP-IVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
+..+.+=||||=.. +...|+...+-.++.++|.++.....-++.+||.-..|-..-.
T Consensus 3 ~~~l~i~YdGt~f~G~Q~Q~~~~TVq~~le~aL~~~~~~~i~~~~agRTD~GVHA~~q 60 (245)
T PRK14586 3 RVAAVVSYDGSNFFGYQGQPDVRTVQGVFEDALERIFKQRIYTQAAGRTDTGVHANGQ 60 (245)
T ss_pred EEEEEEEEcCCceeeEEECCCCCCHHHHHHHHHHHHhCCCeeEEEecCCccCCCccCc
Confidence 56788999999765 4444555567778888998887544457889999888766544
No 338
>PF06014 DUF910: Bacterial protein of unknown function (DUF910); InterPro: IPR009256 This family consists of several short bacterial proteins of unknown function.; PDB: 2NN4_A.
Probab=24.71 E-value=21 Score=26.33 Aligned_cols=26 Identities=38% Similarity=0.539 Sum_probs=16.5
Q ss_pred HHHHHHHcCCCCCCCceEEEEeCCCCCHHHHHH
Q 016649 306 VMFLLESLGLNNCEDVLPIYVGDDRTDEDAFKE 338 (385)
Q Consensus 306 l~~Ll~~lg~~~~~~~~vi~~GD~~nDe~mfk~ 338 (385)
|+.|++++| ..+++||-.-|++|.+.
T Consensus 7 VqQLLK~fG-------~~IY~gdr~~DielM~~ 32 (62)
T PF06014_consen 7 VQQLLKKFG-------IIIYVGDRLWDIELMEI 32 (62)
T ss_dssp HHHHHHTTS------------S-HHHHHHHHHH
T ss_pred HHHHHHHCC-------EEEEeCChHHHHHHHHH
Confidence 678898888 58999999999998653
No 339
>KOG1594 consensus Uncharacterized enzymes related to aldose 1-epimerase [Carbohydrate transport and metabolism]
Probab=23.43 E-value=39 Score=32.34 Aligned_cols=31 Identities=26% Similarity=0.163 Sum_probs=23.2
Q ss_pred ccCCCcccccccchHHHHhcCCCcccccccc
Q 016649 49 KKTGVLDDVRACSWLDAMKSSSPPPKWMAKE 79 (385)
Q Consensus 49 ~~~~~~~~~~~n~w~~~~~~~s~~~~~~~~~ 79 (385)
||.+--|++.-|||++.+++|++=..+....
T Consensus 237 ~k~g~pDaVVWNPW~kksk~maD~gde~Y~~ 267 (305)
T KOG1594|consen 237 KKEGLPDAVVWNPWDKKSKTMADFGDEDYKH 267 (305)
T ss_pred eccCCCceEEeChhHhhhhhhhhccccccce
Confidence 3456667899999999999999866554333
No 340
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=23.43 E-value=1.2e+02 Score=28.08 Aligned_cols=36 Identities=22% Similarity=0.071 Sum_probs=27.4
Q ss_pred CHHHHHHHHHHHcCCCCCCCceE-EEEeCCC-CCHHHHHHH
Q 016649 301 DKGKAVMFLLESLGLNNCEDVLP-IYVGDDR-TDEDAFKEL 339 (385)
Q Consensus 301 nKG~Al~~Ll~~lg~~~~~~~~v-i~~GD~~-nDe~mfk~~ 339 (385)
-+-.-.+.+++.++++.. .. ++|||+. +|+.+=+.+
T Consensus 189 P~~~~~~~~~~~~~~~~~---~~~~~IGD~~~~Di~~A~~~ 226 (236)
T TIGR01460 189 PSPAIYRAALNLLQARPE---RRDVMVGDNLRTDILGAKNA 226 (236)
T ss_pred CCHHHHHHHHHHhCCCCc---cceEEECCCcHHHHHHHHHC
Confidence 346677889999987654 45 9999998 898775554
No 341
>PRK14556 pyrH uridylate kinase; Provisional
Probab=23.01 E-value=1.7e+02 Score=27.75 Aligned_cols=63 Identities=6% Similarity=0.020 Sum_probs=41.9
Q ss_pred HHhcCCCEEEEEecCCccCCCCC-CCCccc---CC------HH----HHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 112 KSAKGKRIALFLDYDGTLSPIVD-NPDCAF---MS------DA----MRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 112 ~~~~~k~~li~lD~DGTL~~~~~-~p~~~~---is------~~----~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
.+-+....+++.|.||-....+. +|+-.. ++ .. -..+++.+.+.+ +++|+.|+....+.+++.
T Consensus 161 ~~l~Ad~Lii~TdVDGVYd~DP~~~p~A~~i~~I~~~e~~~~~l~vmd~~A~~~a~~~gIpi~I~ng~~~~~L~~~l~ 238 (249)
T PRK14556 161 VEIGADALLKATTVNGVYDKDPNKYSDAKRFDKVTFSEVVSKELNVMDLGAFTQCRDFGIPIYVFDLTQPNALVDAVL 238 (249)
T ss_pred HHcCCCEEEEEeCCCccCCCCCCCCCCceEeeEEchhhhcccchHhHHHHHHHHHHHCCCcEEEECCCCchHHHHHHc
Confidence 46677788888999999975432 232111 11 11 124555566665 999999999999999884
No 342
>COG1608 Predicted archaeal kinase [General function prediction only]
Probab=22.93 E-value=3.6e+02 Score=25.64 Aligned_cols=22 Identities=27% Similarity=0.348 Sum_probs=17.3
Q ss_pred HHhcCCCEEEEEecCCccCCCC
Q 016649 112 KSAKGKRIALFLDYDGTLSPIV 133 (385)
Q Consensus 112 ~~~~~k~~li~lD~DGTL~~~~ 133 (385)
+..+..+.++..|.||-+....
T Consensus 158 ~~l~pd~v~f~tdVdGVy~~~p 179 (252)
T COG1608 158 KELKPDRVIFLTDVDGVYDRDP 179 (252)
T ss_pred HHhCCCEEEEEecCCceecCCC
Confidence 4557788888899999998743
No 343
>PRK00021 truA tRNA pseudouridine synthase A; Validated
Probab=22.83 E-value=1.1e+02 Score=28.81 Aligned_cols=57 Identities=25% Similarity=0.282 Sum_probs=42.5
Q ss_pred CEEEEEecCCccCC-CCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHhC
Q 016649 118 RIALFLDYDGTLSP-IVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 118 ~~li~lD~DGTL~~-~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~~ 174 (385)
+.++.+-||||-.. +...|+...+-.++.++|.++.....-++.+||.-..|-..-.
T Consensus 3 ~~~l~i~YdGt~y~G~q~q~~~~TVq~~le~aL~~~~~~~~~~~~agRTD~GVHA~~q 60 (244)
T PRK00021 3 RIALTIEYDGTNFHGWQRQPNGRTVQGELEKALSKLAGEPVRVIGAGRTDAGVHALGQ 60 (244)
T ss_pred EEEEEEEECCCccceeeeCCCCCCHHHHHHHHHHHHhCCCeEEEEEccCCCcccccCc
Confidence 56788999999885 5555665667778888888887644458889999888766543
No 344
>TIGR00735 hisF imidazoleglycerol phosphate synthase, cyclase subunit.
Probab=22.37 E-value=2.9e+02 Score=25.86 Aligned_cols=80 Identities=11% Similarity=0.013 Sum_probs=43.3
Q ss_pred HHHHHHHhcCCCEEEEEec-CCccCCC----CCC-CCcccCCHHHHHHHHHHHhcC-CEEEEcCCChhH---------HH
Q 016649 107 FEQILKSAKGKRIALFLDY-DGTLSPI----VDN-PDCAFMSDAMRAVVKNVAKYF-PTAIISGRSRDK---------VY 170 (385)
Q Consensus 107 ~~~~~~~~~~k~~li~lD~-DGTL~~~----~~~-p~~~~is~~~~~aL~~L~~~~-~v~I~SGR~~~~---------l~ 170 (385)
+.++...-.+.+.++.+|+ +|.+.+. +.. .-.........+.++++.+.+ ..+++|++..+. +.
T Consensus 113 ~~~~~~~~~~~~iv~slD~~~g~~~~~~~~~v~i~gw~~~~~~~~~~~~~~l~~~G~~~iivt~i~~~g~~~g~~~~~~~ 192 (254)
T TIGR00735 113 IYELADRFGSQCIVVAIDAKRVYVNSYCWYEVYIYGGRESTGLDAVEWAKEVEKLGAGEILLTSMDKDGTKSGYDLELTK 192 (254)
T ss_pred HHHHHHHcCCCCEEEEEEeccCCCCCCccEEEEEeCCcccCCCCHHHHHHHHHHcCCCEEEEeCcCcccCCCCCCHHHHH
Confidence 3444422234677888995 5655420 000 001112345677788888776 788889988732 23
Q ss_pred HHhCCcCceEEecCce
Q 016649 171 EFVGLAELYYAGSHGM 186 (385)
Q Consensus 171 ~~~~~~~l~~iaenG~ 186 (385)
++....++.+++..|.
T Consensus 193 ~i~~~~~ipvia~GGi 208 (254)
T TIGR00735 193 AVSEAVKIPVIASGGA 208 (254)
T ss_pred HHHHhCCCCEEEeCCC
Confidence 3333334556666554
No 345
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=22.32 E-value=1.5e+02 Score=28.67 Aligned_cols=35 Identities=14% Similarity=0.216 Sum_probs=30.0
Q ss_pred cCCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 140 FMSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 140 ~is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
.+.+.+.+.|..|.+.+ +++|+||-....+...++
T Consensus 121 ~l~pG~~efl~~L~~~GIpv~IvS~G~~~~Ie~vL~ 156 (277)
T TIGR01544 121 MLKDGYENFFDKLQQHSIPVFIFSAGIGNVLEEVLR 156 (277)
T ss_pred ccCcCHHHHHHHHHHCCCcEEEEeCCcHHHHHHHHH
Confidence 34578899999998886 999999999998888875
No 346
>CHL00202 argB acetylglutamate kinase; Provisional
Probab=22.13 E-value=2.7e+02 Score=26.67 Aligned_cols=59 Identities=27% Similarity=0.358 Sum_probs=32.4
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcCCEEEEcCCChhHHHHHh
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYFPTAIISGRSRDKVYEFV 173 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~~v~I~SGR~~~~l~~~~ 173 (385)
+...-+..+.+++.|.||-+.++ .+|. ..++.-..+.++++...+ .+||.+..+++.-.
T Consensus 189 lA~~l~Ad~li~lTdv~Gv~~~~-~d~~-~~i~~i~~~e~~~l~~~g---~~tGGM~~Kl~aa~ 247 (284)
T CHL00202 189 IAAKLNAEKLILLTDTPGILADI-NDPN-SLISTLNIKEARNLASTG---IISGGMIPKVNCCI 247 (284)
T ss_pred HHHHhCCCEEEEEeCChhhcCCC-CCCC-CccccccHHHHHHHHhcC---CCCCCHHHHHHHHH
Confidence 34455667888899999999854 2232 222221223334443322 34666666666543
No 347
>PF07302 AroM: AroM protein; InterPro: IPR010843 This family consists of several bacterial and archaeal AroM proteins. In Escherichia coli the aroM gene is cotranscribed with aroL []. The function of this family is unknown.
Probab=21.84 E-value=1.1e+02 Score=28.62 Aligned_cols=59 Identities=19% Similarity=0.156 Sum_probs=45.2
Q ss_pred CCCCc--HHHHHHHh--cCCCEEEEEecCCccCCCCCCCCcccCCHHHHHHHHHHHhcC---CEEEEcCC
Q 016649 102 SALTS--FEQILKSA--KGKRIALFLDYDGTLSPIVDNPDCAFMSDAMRAVVKNVAKYF---PTAIISGR 164 (385)
Q Consensus 102 ~~L~~--~~~~~~~~--~~k~~li~lD~DGTL~~~~~~p~~~~is~~~~~aL~~L~~~~---~v~I~SGR 164 (385)
.+|+. -++|.+|+ .+...|+-.--|||.+-. ++.++.+++.+.+.+|.+++ .+..|||.
T Consensus 33 G~LDgls~~eI~~~aP~~ge~vLvTrL~DG~~V~l----s~~~v~~~lq~~i~~le~~G~d~illlCTG~ 98 (221)
T PF07302_consen 33 GALDGLSREEIAALAPEPGEYVLVTRLRDGTQVVL----SKKKVEPRLQACIAQLEAQGYDVILLLCTGE 98 (221)
T ss_pred ccCCCCCHHHHHHhCCCCCCceeEEEeCCCCEEEE----EHHHHHHHHHHHHHHHHHCCCCEEEEeccCC
Confidence 45655 46677666 566777778889999885 45678889999999998885 57889997
No 348
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=21.80 E-value=1.1e+02 Score=28.36 Aligned_cols=34 Identities=12% Similarity=0.020 Sum_probs=28.4
Q ss_pred CCHHHHHHHHHHHhcC-CEEEEcCCChhHHHHHhC
Q 016649 141 MSDAMRAVVKNVAKYF-PTAIISGRSRDKVYEFVG 174 (385)
Q Consensus 141 is~~~~~aL~~L~~~~-~v~I~SGR~~~~l~~~~~ 174 (385)
+-+.+.++|++|.+.+ +++|+|..+......+++
T Consensus 96 lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~~~~~ 130 (220)
T TIGR01691 96 LYPDVPPALEAWLQLGLRLAVYSSGSVPAQKLLFG 130 (220)
T ss_pred cCcCHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHh
Confidence 4568899999999886 899999999887776664
No 349
>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase. This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.
Probab=21.63 E-value=2.3e+02 Score=31.12 Aligned_cols=64 Identities=19% Similarity=0.218 Sum_probs=40.0
Q ss_pred HHHHhcCCCEEEEEecCCccCCCCCCCCccc-------------------------CCHHHHHHHHHHHhcC-CEEEEcC
Q 016649 110 ILKSAKGKRIALFLDYDGTLSPIVDNPDCAF-------------------------MSDAMRAVVKNVAKYF-PTAIISG 163 (385)
Q Consensus 110 ~~~~~~~k~~li~lD~DGTL~~~~~~p~~~~-------------------------is~~~~~aL~~L~~~~-~v~I~SG 163 (385)
+...-+....++++|.||-+.....+|+... |-+++. +...+.+.+ +++|++|
T Consensus 176 lA~~l~Ad~LiilTDVdGVy~~dP~~~~a~~I~~i~~~~~~~~i~~~~~~~~~tGGM~~Kl~-aa~~a~~~gi~v~I~~g 254 (715)
T TIGR01092 176 LALELKADLLILLSDVEGLYDGPPSDDDSKLIDTFYKEKHQGEITFGTKSRLGRGGMTAKVK-AAVWAAYGGTPVIIASG 254 (715)
T ss_pred HHHHcCCCEEEEEeCCCeeeCCCCCCCCCeEeeeecccchhhhhccCcccccCCCCchHHHH-HHHHHHHCCCeEEEeCC
Confidence 3345567788888999999976433332211 222332 333344444 8899999
Q ss_pred CChhHHHHHhC
Q 016649 164 RSRDKVYEFVG 174 (385)
Q Consensus 164 R~~~~l~~~~~ 174 (385)
+....+.+++.
T Consensus 255 ~~~~~l~~~l~ 265 (715)
T TIGR01092 255 TAPKNITKVVE 265 (715)
T ss_pred CCcchHHHHhc
Confidence 98888888774
No 350
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=21.58 E-value=82 Score=32.96 Aligned_cols=14 Identities=21% Similarity=0.377 Sum_probs=11.8
Q ss_pred CEEEEEecCCccCC
Q 016649 118 RIALFLDYDGTLSP 131 (385)
Q Consensus 118 ~~li~lD~DGTL~~ 131 (385)
+.-+++|+||||+.
T Consensus 8 ~~~~~fD~DGTLlr 21 (498)
T PLN02499 8 SYSVVSELEGTLLK 21 (498)
T ss_pred cceEEEecccceec
Confidence 34588999999998
No 351
>PLN02458 transferase, transferring glycosyl groups
Probab=21.46 E-value=1.5e+02 Score=29.44 Aligned_cols=35 Identities=20% Similarity=0.159 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHcCCCCCCCceEEEEeCCCC--CHHHHHHHHhC
Q 016649 302 KGKAVMFLLESLGLNNCEDVLPIYVGDDRT--DEDAFKELREG 342 (385)
Q Consensus 302 KG~Al~~Ll~~lg~~~~~~~~vi~~GD~~n--De~mfk~~~~~ 342 (385)
.-.|+++|-++. + +-++||+|+.| |++.|+-++..
T Consensus 190 RN~AL~~IR~h~-l-----~GVVyFADDdNtYsl~LFeEmR~i 226 (346)
T PLN02458 190 RNLALRHIEHHK-L-----SGIVHFAGLSNVYDLDFFDEIRDI 226 (346)
T ss_pred HHHHHHHHHhcC-c-----CceEEEccCCCcccHHHHHHHhcC
Confidence 446777776543 2 25999999887 88889998763
No 352
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=20.87 E-value=2.1e+02 Score=27.43 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=39.8
Q ss_pred CCCEEEEEecCCccCCCCCC---------------------CCcccCCHHHHHHHHHHHhcC-------CEEEEcCCChh
Q 016649 116 GKRIALFLDYDGTLSPIVDN---------------------PDCAFMSDAMRAVVKNVAKYF-------PTAIISGRSRD 167 (385)
Q Consensus 116 ~k~~li~lD~DGTL~~~~~~---------------------p~~~~is~~~~~aL~~L~~~~-------~v~I~SGR~~~ 167 (385)
.+..=|+||-|+.|.+.... |-..-+-......|.+|++.+ +++|+|.|+..
T Consensus 119 ~~qlRIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~ap 198 (264)
T PF06189_consen 119 DDQLRIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAP 198 (264)
T ss_pred CCceEEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCc
Confidence 55677899999999984211 111112245677777777641 58999999988
Q ss_pred HHHHHhC
Q 016649 168 KVYEFVG 174 (385)
Q Consensus 168 ~l~~~~~ 174 (385)
.-.+.++
T Consensus 199 ah~RvI~ 205 (264)
T PF06189_consen 199 AHERVIR 205 (264)
T ss_pred hhHHHHH
Confidence 7777664
No 353
>cd04241 AAK_FomA-like AAK_FomA-like: This CD includes a fosfomycin biosynthetic gene product, FomA, and similar proteins found in a wide range of organisms. Together, the fomA and fomB genes in the fosfomycin biosynthetic gene cluster of Streptomyces wedmorensis confer high-level fosfomycin resistance. FomA and FomB proteins converted fosfomycin to fosfomycin monophosphate and fosfomycin diphosphate in the presence of ATP and a magnesium ion, indicating that FomA and FomB catalyzed phosphorylations of fosfomycin and fosfomycin monophosphate, respectively. FomA and related sequences in this CD are members of the Amino Acid Kinase Superfamily (AAK).
Probab=20.42 E-value=2.9e+02 Score=25.73 Aligned_cols=21 Identities=29% Similarity=0.442 Sum_probs=16.3
Q ss_pred HHhcCCCEEEEEecCCccCCC
Q 016649 112 KSAKGKRIALFLDYDGTLSPI 132 (385)
Q Consensus 112 ~~~~~k~~li~lD~DGTL~~~ 132 (385)
..-+..+.+++.|.||-+...
T Consensus 158 ~~l~A~~li~ltdv~Gv~~~~ 178 (252)
T cd04241 158 KALKPERVIFLTDVDGVYDKP 178 (252)
T ss_pred HHcCCCEEEEEeCCCeeECCC
Confidence 444667788889999999764
Done!