Your job contains 1 sequence.
>016653
MDSEGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLE
MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQL
KVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYE
GLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAP
EILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVY
SQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNA
LYQATIKQGDFLLNRIQKLSRVIDL
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016653
(385 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2126798 - symbol:AT4G24820 "AT4G24820" species... 1694 2.3e-174 1
ZFIN|ZDB-GENE-040426-1038 - symbol:psmd6 "proteasome (pro... 1078 4.3e-109 1
RGD|735127 - symbol:Psmd6 "proteasome (prosome, macropain... 1060 3.5e-107 1
UNIPROTKB|F1MXE4 - symbol:PSMD6 "26S proteasome non-ATPas... 1059 4.4e-107 1
UNIPROTKB|F1N903 - symbol:PSMD6 "Uncharacterized protein"... 1057 7.2e-107 1
UNIPROTKB|Q15008 - symbol:PSMD6 "26S proteasome non-ATPas... 1055 1.2e-106 1
MGI|MGI:1913663 - symbol:Psmd6 "proteasome (prosome, macr... 1054 1.5e-106 1
UNIPROTKB|Q3T0B2 - symbol:PSMD6 "26S proteasome non-ATPas... 1052 2.5e-106 1
UNIPROTKB|E2RN00 - symbol:PSMD6 "Uncharacterized protein"... 1050 4.0e-106 1
UNIPROTKB|Q6UV22 - symbol:PSMD6 "KIAA0107 isoform" specie... 1029 6.7e-104 1
UNIPROTKB|C9IZE4 - symbol:PSMD6 "Proteasome (Prosome, mac... 1021 4.7e-103 1
FB|FBgn0028688 - symbol:Rpn7 "Regulatory particle non-ATP... 1010 6.9e-102 1
DICTYBASE|DDB_G0270188 - symbol:psmD6 "26S proteasome non... 975 3.5e-98 1
WB|WBGene00004463 - symbol:rpn-7 species:6239 "Caenorhabd... 876 1.1e-87 1
POMBASE|SPBC582.07c - symbol:rpn7 "19S proteasome regulat... 778 2.7e-77 1
GENEDB_PFALCIPARUM|PF11_0303 - symbol:PF11_0303 "26S prot... 762 1.3e-75 1
CGD|CAL0003998 - symbol:RPN7 species:5476 "Candida albica... 708 7.0e-70 1
ASPGD|ASPL0000043868 - symbol:AN1922 species:162425 "Emer... 402 1.4e-68 2
SGD|S000006312 - symbol:RPN7 "non-ATPase regulatory subun... 669 9.4e-66 1
DICTYBASE|DDB_G0283587 - symbol:csn1 "COP9 signalosome co... 304 6.1e-27 1
ZFIN|ZDB-GENE-041111-240 - symbol:gps1 "G protein pathway... 250 5.0e-19 1
UNIPROTKB|F1P996 - symbol:GPS1 "Uncharacterized protein" ... 244 1.7e-18 1
MGI|MGI:2384801 - symbol:Gps1 "G protein pathway suppress... 244 2.3e-18 1
UNIPROTKB|F1MP10 - symbol:GPS1 "Uncharacterized protein" ... 244 2.4e-18 1
RGD|621532 - symbol:Gps1 "G protein pathway suppressor 1"... 243 3.0e-18 1
UNIPROTKB|F1NB10 - symbol:GPS1 "Uncharacterized protein" ... 243 3.4e-18 1
UNIPROTKB|F1NJQ7 - symbol:GPS1 "Uncharacterized protein" ... 243 3.5e-18 1
UNIPROTKB|C9JFE4 - symbol:GPS1 "G protein pathway suppres... 241 5.4e-18 1
UNIPROTKB|Q13098 - symbol:GPS1 "COP9 signalosome complex ... 241 6.1e-18 1
TAIR|locus:2098851 - symbol:FUS6 "FUSCA 6" species:3702 "... 231 6.6e-17 1
FB|FBgn0027057 - symbol:CSN1b "COP9 complex homolog subun... 225 5.6e-16 1
CGD|CAL0003109 - symbol:RPN6 species:5476 "Candida albica... 113 5.3e-07 2
POMBASE|SPBC215.03c - symbol:csn1 "COP9/signalosome compl... 143 6.8e-07 1
ASPGD|ASPL0000047276 - symbol:csnA species:162425 "Emeric... 136 5.4e-06 1
>TAIR|locus:2126798 [details] [associations]
symbol:AT4G24820 "AT4G24820" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=ISS]
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0030163 "protein catabolic
process" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0009640
"photomorphogenesis" evidence=RCA] [GO:0009735 "response to
cytokinin stimulus" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010388 "cullin deneddylation"
evidence=RCA] [GO:0042023 "DNA endoreduplication" evidence=RCA]
[GO:0043090 "amino acid import" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] [GO:0051302
"regulation of cell division" evidence=RCA] [GO:0051510 "regulation
of unidimensional cell growth" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] [GO:0051788 "response to misfolded
protein" evidence=RCA] [GO:0080129 "proteasome core complex
assembly" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005829 GO:GO:0005886 GO:GO:0005634
EMBL:CP002687 GenomeReviews:CT486007_GR Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0030163 GO:GO:0000502 EMBL:AL161562
EMBL:AL049657 eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602
EMBL:AY054500 EMBL:AY093269 EMBL:BT000653 EMBL:AY087847
IPI:IPI00520982 PIR:T06666 RefSeq:NP_567709.1 RefSeq:NP_974611.1
UniGene:At.3132 ProteinModelPortal:Q93Y35 IntAct:Q93Y35
STRING:Q93Y35 PaxDb:Q93Y35 PRIDE:Q93Y35 DNASU:828585
EnsemblPlants:AT4G24820.1 EnsemblPlants:AT4G24820.2 GeneID:828585
KEGG:ath:AT4G24820 TAIR:At4g24820 HOGENOM:HOG000214998
InParanoid:Q93Y35 KO:K03037 OMA:YTVYVCM PhylomeDB:Q93Y35
ProtClustDB:CLSN2689595 Genevestigator:Q93Y35 GermOnline:AT4G24820
Uniprot:Q93Y35
Length = 387
Score = 1694 (601.4 bits), Expect = 2.3e-174, P = 2.3e-174
Identities = 326/383 (85%), Positives = 360/383 (93%)
Query: 3 SEGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMD 62
+EG+QQ HL+LA+K FLLTHPDV DIEKV LK EV +++H MA YETL+A SVL++D
Sbjct: 5 AEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLD 64
Query: 63 QSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKV 122
QS+L+SMR E+ELKKLD++IADAEENLGESEVREAHLAK+L++I+I DKEKALEQLK+
Sbjct: 65 QSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKL 124
Query: 123 TESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGL 182
TE KTVAVGQKMD+VFYTLQL FFYMDFDL+SKSIDKAK LFEEGGDWERKNRLKVYEGL
Sbjct: 125 TEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEGL 184
Query: 183 YCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEI 242
YCMSTRNFKKAASLFLDSISTFTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPEI
Sbjct: 185 YCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPEI 244
Query: 243 LTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQ 302
LTV+GKIP+LSEFLNSLY+CQYK+FFSAFAG+ QIK DRYLYPHFR+YMREVRTVVYSQ
Sbjct: 245 LTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYSQ 304
Query: 303 FLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALY 362
FLESYKSVT+EAMAKAFGV+V+FID ELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALY
Sbjct: 305 FLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALY 364
Query: 363 QATIKQGDFLLNRIQKLSRVIDL 385
QATIKQGDFLLNRIQKLSRVIDL
Sbjct: 365 QATIKQGDFLLNRIQKLSRVIDL 387
>ZFIN|ZDB-GENE-040426-1038 [details] [associations]
symbol:psmd6 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 6" species:7955 "Danio rerio" [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0070306 "lens fiber cell differentiation"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-040426-1038 GO:GO:0043161 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0070306 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:BC049452
EMBL:BC153637 IPI:IPI00501573 RefSeq:NP_956585.1 UniGene:Dr.84195
STRING:Q7ZWE5 GeneID:393261 KEGG:dre:393261 InParanoid:Q7ZWE5
NextBio:20814320 Uniprot:Q7ZWE5
Length = 386
Score = 1078 (384.5 bits), Expect = 4.3e-109, P = 4.3e-109
Identities = 208/386 (53%), Positives = 289/386 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + +L +A +FLLTH QD + +K E+ +K ++MA +YETL E
Sbjct: 6 LEEEGLPKNPNLRIAQLKFLLTHR--QDAQ---VKSELMDAIKLNNMAPYYETLCKELKW 60
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+ D +L M+ EDELK+LDD + DAE+NLGESE+R+A +AK+ + I+IGDKE AL
Sbjct: 61 QADTDLLSKMKKANEDELKRLDDVLEDAEKNLGESEIRDAMMAKAEYLIRIGDKEGALTA 120
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 121 FRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 180
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV +I+L R L++KV+
Sbjct: 181 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVCMIALKRPDLREKVIKG 240
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R +
Sbjct: 241 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLARVEQEMKQDWLFAPHYRYYVREMRILA 300
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV+ EFID ELSRFIAAG+LHCKIDKV ++ETNRPD+KN
Sbjct: 301 YSQLLESYRSLTLGYMAEAFGVSTEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKN 360
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 361 WQYQETIKKGDLLLNRVQKLSRVINM 386
>RGD|735127 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10116 "Rattus norvegicus" [GO:0022624
"proteasome accessory complex" evidence=IEA;ISO] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 RGD:735127 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOGENOM:HOG000214998
KO:K03037 OMA:YTVYVCM CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:CH474010 EMBL:BC059159 IPI:IPI00189463 RefSeq:NP_942025.1
UniGene:Rn.103875 IntAct:Q6PCT9 STRING:Q6PCT9
Ensembl:ENSRNOT00000009249 GeneID:289924 KEGG:rno:289924
InParanoid:Q6PCT9 NextBio:630485 Genevestigator:Q6PCT9
Uniprot:Q6PCT9
Length = 389
Score = 1060 (378.2 bits), Expect = 3.5e-107, P = 3.5e-107
Identities = 204/386 (52%), Positives = 287/386 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DTAVREELMAAVRENNMAPYYEALCKSLDW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+MD +L M+ E+ELK+LD+ + DAE+NLGESE+R+A +AK+ + QIGDKE AL
Sbjct: 64 QMDMDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDKV ++ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGDLLLNRVQKLSRVINM 389
>UNIPROTKB|F1MXE4 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
OMA:YTVYVCM IPI:IPI00697833 UniGene:Bt.3193 EMBL:DAAA02054147
Ensembl:ENSBTAT00000020108 Uniprot:F1MXE4
Length = 389
Score = 1059 (377.8 bits), Expect = 4.4e-107, P = 4.4e-107
Identities = 205/386 (53%), Positives = 288/386 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVRDELMAAVRDNNMAPYYEALCKSLEW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+MD +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+ + +IGDKE AL
Sbjct: 64 QMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDKV V+ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGDLLLNRVQKLSRVINM 389
>UNIPROTKB|F1N903 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 OMA:YTVYVCM EMBL:AADN02014237
IPI:IPI00601017 Ensembl:ENSGALT00000011836 Uniprot:F1N903
Length = 398
Score = 1057 (377.1 bits), Expect = 7.2e-107, P = 7.2e-107
Identities = 205/387 (52%), Positives = 288/387 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLT-HPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESV 58
++ EG + L +A RFLL+ P D + E+ + V+ H+MA +YE L
Sbjct: 15 LEEEGLPKNPDLRIAQLRFLLSLRPRAPD---PAARDELMAAVRLHNMAPYYEALCKSLE 71
Query: 59 LEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALE 118
++D +L+ M+ E+ELK+LD+ + DAE+ LGESE+R+A +AK+ + +IGDKE AL
Sbjct: 72 WQIDTELLNKMKKANEEELKRLDNELEDAEKILGESEIRDAMMAKAEYLCRIGDKEGALT 131
Query: 119 QLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKV 178
+ T KTVA+G ++D+VFY L++G FYMD DLI+++I+KAKSL EEGGDW+R+NRLKV
Sbjct: 132 AFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNIEKAKSLIEEGGDWDRRNRLKV 191
Query: 179 YEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVD 238
Y+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+LDR L++KV+
Sbjct: 192 YQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALDRPDLREKVIK 251
Query: 239 APEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTV 298
EIL V+ +P + ++L SLY+C+Y +FF + A + +++K D PH+RYY+RE+R
Sbjct: 252 GAEILEVLHSLPAVRQYLFSLYECRYAAFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIH 311
Query: 299 VYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAK 358
YSQ LESY+S+T+ MA+AFGV+VEFID ELSRFIAAG+LHCKIDKV ++ETNRPD+K
Sbjct: 312 AYSQLLESYRSLTLGYMAEAFGVSVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSK 371
Query: 359 NALYQATIKQGDFLLNRIQKLSRVIDL 385
N YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 372 NWQYQETIKKGDLLLNRVQKLSRVINM 398
>UNIPROTKB|Q15008 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9606 "Homo sapiens" [GO:0006508 "proteolysis"
evidence=NAS] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0016887 "ATPase activity" evidence=NAS] [GO:0022624 "proteasome
accessory complex" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=TAS] [GO:0000082 "G1/S transition of mitotic
cell cycle" evidence=TAS] [GO:0000084 "S phase of mitotic cell
cycle" evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0006200 "ATP catabolic process" evidence=NAS]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 GO:GO:0005829
Reactome:REACT_111102 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0006915 GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 EMBL:CH471055 GO:GO:0000082
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0016887 GO:GO:0051436
GO:GO:0000216 GO:GO:0000209 GO:GO:0000084 GO:GO:0031145
GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 CTD:9861 HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB
EMBL:AF215935 EMBL:AF530062 EMBL:AY568086 EMBL:D14663 EMBL:AK290205
EMBL:BC000630 EMBL:BC000904 EMBL:BC012369 IPI:IPI00014151
RefSeq:NP_055629.1 UniGene:Hs.152536 ProteinModelPortal:Q15008
DIP:DIP-27590N IntAct:Q15008 MINT:MINT-5004632 STRING:Q15008
PhosphoSite:Q15008 DMDM:2494625 PaxDb:Q15008 PRIDE:Q15008
Ensembl:ENST00000295901 GeneID:9861 KEGG:hsa:9861 UCSC:uc003dlz.1
GeneCards:GC03M063973 HGNC:HGNC:9564 HPA:HPA036922
neXtProt:NX_Q15008 PharmGKB:PA33910 InParanoid:Q15008
PhylomeDB:Q15008 ChiTaRS:PSMD6 GenomeRNAi:9861 NextBio:37172
ArrayExpress:Q15008 Bgee:Q15008 CleanEx:HS_PSMD6
Genevestigator:Q15008 GermOnline:ENSG00000163636 Uniprot:Q15008
Length = 389
Score = 1055 (376.4 bits), Expect = 1.2e-106, P = 1.2e-106
Identities = 203/386 (52%), Positives = 288/386 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVRDELMAAVRDNNMAPYYEALCKSLDW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
++D +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+ + +IGDKE AL
Sbjct: 64 QIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDKV ++ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGDLLLNRVQKLSRVINM 389
>MGI|MGI:1913663 [details] [associations]
symbol:Psmd6 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 6" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IDA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
MGI:MGI:1913663 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
GO:GO:0022624 HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM CTD:9861
HOVERGEN:HBG023924 OrthoDB:EOG4DV5MB EMBL:AJ252147 EMBL:AK010287
EMBL:BC006869 IPI:IPI00319965 RefSeq:NP_079826.2 UniGene:Mm.27591
ProteinModelPortal:Q99JI4 IntAct:Q99JI4 STRING:Q99JI4
PhosphoSite:Q99JI4 PaxDb:Q99JI4 PRIDE:Q99JI4 DNASU:66413
Ensembl:ENSMUST00000022256 GeneID:66413 KEGG:mmu:66413
UCSC:uc007sgj.1 InParanoid:Q99JI4 NextBio:321623 Bgee:Q99JI4
Genevestigator:Q99JI4 GermOnline:ENSMUSG00000021737 Uniprot:Q99JI4
Length = 389
Score = 1054 (376.1 bits), Expect = 1.5e-106, P = 1.5e-106
Identities = 203/386 (52%), Positives = 287/386 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVREELMAAVRENNMAPYYEALCKSLDW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+MD +L M+ E+ELK+LD+ + DAE+NLGESE+R+A +AK+ + QIGDKE AL
Sbjct: 64 QMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV V+FID ELSRFIAAG+LHCKIDKV ++ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGDLLLNRVQKLSRVINM 389
>UNIPROTKB|Q3T0B2 [details] [associations]
symbol:PSMD6 "26S proteasome non-ATPase regulatory subunit
6" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GO:GO:0022624 HOGENOM:HOG000214998
KO:K03037 EMBL:BC102468 IPI:IPI00697833 RefSeq:NP_001029821.1
UniGene:Bt.3193 ProteinModelPortal:Q3T0B2 STRING:Q3T0B2
PRIDE:Q3T0B2 GeneID:538625 KEGG:bta:538625 CTD:9861
HOVERGEN:HBG023924 InParanoid:Q3T0B2 OrthoDB:EOG4DV5MB
NextBio:20877481 Uniprot:Q3T0B2
Length = 389
Score = 1052 (375.4 bits), Expect = 2.5e-106, P = 2.5e-106
Identities = 204/386 (52%), Positives = 287/386 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVRDELMAAVRDNNMAPYYEALCKSLEW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+MD +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+ + +IGDKE AL
Sbjct: 64 QMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDKV V+ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+G LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGGLLLNRVQKLSRVINM 389
>UNIPROTKB|E2RN00 [details] [associations]
symbol:PSMD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0022624 "proteasome accessory complex"
evidence=IEA] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AAEX03012146
Ensembl:ENSCAFT00000011009 OMA:HRARESH NextBio:20858788
Uniprot:E2RN00
Length = 516
Score = 1050 (374.7 bits), Expect = 4.0e-106, P = 4.0e-106
Identities = 202/386 (52%), Positives = 287/386 (74%)
Query: 1 MDSEGT-QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + V + E+ + + ++MA +YE L
Sbjct: 133 LEEEGLPKNPDLRIAQLRFLLSLPEPRGDAPV--RDELMAAFRDNNMAPYYEALCKSLDW 190
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
++D +L+ MR EDELK+LD+ + DAE+NLGESE+R+A +AK+ + ++GDK+ AL
Sbjct: 191 QLDTDLLNKMRKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRVGDKDGALTA 250
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 251 FRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 310
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 311 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 370
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 371 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHA 430
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDKV ++ETNRPD+KN
Sbjct: 431 YSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKN 490
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 491 WQYQETIKKGDLLLNRVQKLSRVINM 516
>UNIPROTKB|Q6UV22 [details] [associations]
symbol:PSMD6 "KIAA0107 isoform" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 HOVERGEN:HBG023924
OrthoDB:EOG4DV5MB UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564
ChiTaRS:PSMD6 EMBL:AY359879 IPI:IPI00794383 RefSeq:NP_001258709.1
STRING:Q6UV22 Ensembl:ENST00000394431 UCSC:uc003dmd.1
Uniprot:Q6UV22
Length = 351
Score = 1029 (367.3 bits), Expect = 6.7e-104, P = 6.7e-104
Identities = 193/342 (56%), Positives = 265/342 (77%)
Query: 44 HDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAK 103
+DMA +YE L ++D +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK
Sbjct: 10 YDMAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAK 69
Query: 104 SLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSL 163
+ + +IGDKE AL + T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL
Sbjct: 70 AEYLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSL 129
Query: 164 FEEGGDWERKNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTS 223
EEGGDW+R+NRLKVY+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S
Sbjct: 130 IEEGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVS 189
Query: 224 IISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRY 283
+I+L+R L++KV+ EIL V+ +P + ++L SLY+C+Y FF + A + +++K D
Sbjct: 190 MIALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWL 249
Query: 284 LYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKI 343
PH+RYY+RE+R YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKI
Sbjct: 250 FAPHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKI 309
Query: 344 DKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 385
DKV ++ETNRPD+KN YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 310 DKVNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 351
>UNIPROTKB|C9IZE4 [details] [associations]
symbol:PSMD6 "Proteasome (Prosome, macropain) 26S subunit,
non-ATPase, 6, isoform CRA_b" species:9606 "Homo sapiens"
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 EMBL:CH471055 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 EMBL:AC012557 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 OMA:YTVYVCM OrthoDB:EOG4DV5MB
UniGene:Hs.152536 GeneID:9861 HGNC:HGNC:9564 ChiTaRS:PSMD6
IPI:IPI00793381 RefSeq:NP_001258708.1 STRING:C9IZE4
Ensembl:ENST00000492933 UCSC:uc003dmb.1 Uniprot:C9IZE4
Length = 442
Score = 1021 (364.5 bits), Expect = 4.7e-103, P = 4.7e-103
Identities = 192/340 (56%), Positives = 263/340 (77%)
Query: 46 MASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSL 105
MA +YE L ++D +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+
Sbjct: 103 MAPYYEALCKSLDWQIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAE 162
Query: 106 FYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFE 165
+ +IGDKE AL + T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL E
Sbjct: 163 YLCRIGDKEGALTAFRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIE 222
Query: 166 EGGDWERKNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSII 225
EGGDW+R+NRLKVY+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I
Sbjct: 223 EGGDWDRRNRLKVYQGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMI 282
Query: 226 SLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLY 285
+L+R L++KV+ EIL V+ +P + ++L SLY+C+Y FF + A + +++K D
Sbjct: 283 ALERPDLREKVIKGAEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFA 342
Query: 286 PHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDK 345
PH+RYY+RE+R YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDK
Sbjct: 343 PHYRYYVREMRIHAYSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDK 402
Query: 346 VAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 385
V ++ETNRPD+KN YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 403 VNEIVETNRPDSKNWQYQETIKKGDLLLNRVQKLSRVINM 442
>FB|FBgn0028688 [details] [associations]
symbol:Rpn7 "Regulatory particle non-ATPase 7" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS;NAS;IDA] [GO:0006508
"proteolysis" evidence=ISS;NAS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0009987 "cellular process"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 EMBL:AE014297
GO:GO:0022008 GO:GO:0006508 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0004175 GO:GO:0008541 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 BRENDA:3.4.25.1 KO:K03037
EMBL:AF145308 EMBL:AY052008 RefSeq:NP_651048.1 UniGene:Dm.3424
ProteinModelPortal:Q9V3G7 DIP:DIP-23841N IntAct:Q9V3G7
MINT:MINT-845287 STRING:Q9V3G7 PaxDb:Q9V3G7 PRIDE:Q9V3G7
EnsemblMetazoa:FBtr0084294 GeneID:42641 KEGG:dme:Dmel_CG5378
UCSC:CG5378-RA CTD:42641 FlyBase:FBgn0028688 InParanoid:Q9V3G7
OMA:PWYEHIC OrthoDB:EOG4XPNXD PhylomeDB:Q9V3G7 GenomeRNAi:42641
NextBio:829829 Bgee:Q9V3G7 GermOnline:CG5378 Uniprot:Q9V3G7
Length = 389
Score = 1010 (360.6 bits), Expect = 6.9e-102, P = 6.9e-102
Identities = 193/386 (50%), Positives = 286/386 (74%)
Query: 1 MDSEGTQQ-AHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ +G ++ +L LA +FLLT + + + LK ++ ++ +MA +YE + +E
Sbjct: 6 LEEQGLEKNPNLELAQTKFLLTLAEYK--QDAALKAKLLEAIRTENMAPWYEHICSELGW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+D+ +L M+ E+++LD I DAE+NLGE EVREA+L KS + +IGDK A
Sbjct: 64 TVDKDLLARMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTV++G ++D+VF+ ++LG FY+D DLI+++IDKAK L EEGGDW+R+NRLKVY
Sbjct: 124 FRKTYEKTVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+G+Y ++ R+FK AA+ FLD++STFT+YEL Y TF+ YTV ++I+L R L+ KV+
Sbjct: 184 QGVYSVAVRDFKAAATFFLDTVSTFTSYELMDYPTFVRYTVYVAMIALPRNELRDKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EI V+ +P + +FL SLY+CQY++F+ AG+ +Q++LD ++PH+RYY+RE+R +
Sbjct: 244 SEIQEVLHGLPDVKQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIHPHYRYYVREMRILG 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
Y+Q LESY+S+T++ MA++FGVTVE+ID EL+RFIAAG+LH K+D+V G++ETNRPD KN
Sbjct: 304 YTQLLESYRSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDRVGGIVETNRPDNKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQATIKQGD LLNRIQKLSRVI++
Sbjct: 364 WQYQATIKQGDLLLNRIQKLSRVINI 389
>DICTYBASE|DDB_G0270188 [details] [associations]
symbol:psmD6 "26S proteasome non-ATPase regulatory
subunit 6" species:44689 "Dictyostelium discoideum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005198 "structural molecule activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0270188 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0000502 GO:GO:0006511 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 KO:K03037 OMA:YTVYVCM
RefSeq:XP_646606.1 ProteinModelPortal:Q55C75 STRING:Q55C75
PRIDE:Q55C75 EnsemblProtists:DDB0232985 GeneID:8617578
KEGG:ddi:DDB_G0270188 ProtClustDB:CLSZ2444089 Uniprot:Q55C75
Length = 382
Score = 975 (348.3 bits), Expect = 3.5e-98, P = 3.5e-98
Identities = 181/345 (52%), Positives = 259/345 (75%)
Query: 41 VKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAH 100
++ H M Y+ LV + DQ ++ ++ + E ELK LD++I D+ EN GESE+REA+
Sbjct: 38 IETHKMLPLYKILVEQLKWTEDQGLVSKLKAENESELKALDNKITDSVENFGESEIREAY 97
Query: 101 LAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKA 160
LAKS FY +IGDK+ A+E + T KTV +GQK+D+VF +++G F+MD D+++++++KA
Sbjct: 98 LAKSDFYCRIGDKDTAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKA 157
Query: 161 KSLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTV 220
+SL EEGGDW+RKNRLK YE +Y MS R FK+A+ L+L+++++FT+ E Y FI Y +
Sbjct: 158 QSLVEEGGDWDRKNRLKTYEAVYKMSIRQFKEASDLYLETVASFTSTEFIDYSRFIQYLI 217
Query: 221 LTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKL 280
TS++ LDRVSLKQKV+D+P++L+VI P L + L S Y+ Y +FF A A ++ IK
Sbjct: 218 FTSLLHLDRVSLKQKVIDSPDVLSVINDTPKLQDLLQSFYNGDYANFFGALAHFSDSIKG 277
Query: 281 DRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLH 340
DRYL H R++ RE+R + Y+QFLESY SV +E+M+ FGV+ +FID ELSRF+AAG+L+
Sbjct: 278 DRYLAEHSRFFTREMRILAYNQFLESYSSVKLESMSNQFGVSYDFIDRELSRFVAAGRLN 337
Query: 341 CKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 385
CKIDKV+GV+ET R DAKN LY+ T++QGD LLNR+QKLSRVI++
Sbjct: 338 CKIDKVSGVIETTRSDAKNHLYKTTLQQGDNLLNRVQKLSRVINV 382
>WB|WBGene00004463 [details] [associations]
symbol:rpn-7 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0008340 GO:GO:0009792
GO:GO:0006915 GO:GO:0002119 GO:GO:0018996 GO:GO:0000003
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 eggNOG:COG5187
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM EMBL:Z68227 PIR:T22413
RefSeq:NP_501632.1 ProteinModelPortal:Q20585 DIP:DIP-26993N
IntAct:Q20585 MINT:MINT-211626 STRING:Q20585 PaxDb:Q20585
EnsemblMetazoa:F49C12.8.1 EnsemblMetazoa:F49C12.8.2 GeneID:177753
KEGG:cel:CELE_F49C12.8 UCSC:F49C12.8 CTD:177753 WormBase:F49C12.8
InParanoid:Q20585 NextBio:898240 Uniprot:Q20585
Length = 410
Score = 876 (313.4 bits), Expect = 1.1e-87, P = 1.1e-87
Identities = 182/381 (47%), Positives = 247/381 (64%)
Query: 11 LVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMR 70
L L+ RF+L HP+V K ++ +K DMA FYE + A+ + +D + L +M+
Sbjct: 29 LELSQTRFMLNHPEVDSSVKEAKLEKLQETIKEFDMAPFYELVCADFKIVVDATQLAAMK 88
Query: 71 TKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAV 130
+ ++ ++ + DAE+NLGESEVR+ L K +Y QIGDK+ AL+ T KTV +
Sbjct: 89 AANQKKIDEITAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTVGM 148
Query: 131 GQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMSTRNF 190
G ++D+VF +++G F++D LI+K I KAK L E+GGDWERKNRL+ YE LY MS R+F
Sbjct: 149 GYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQGGDWERKNRLRSYEALYRMSVRDF 208
Query: 191 KKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEI---LT--- 244
AA LFL+++ TF +YEL Y+ I YTV+T+ +LDR L+ KV+ E+ LT
Sbjct: 209 AGAADLFLEAVPTFGSYELMTYENLILYTVITTTFALDRPDLRTKVIRCNEVQEQLTGGG 268
Query: 245 VIGKIPYLSEFLNSLYDCQYKSFFSAFAGL-TEQIKLDRYLYPHFRYYMREVRTVVYSQF 303
+ G + + E+L S YDC Y FF A L +E+ K DRYL PHF YY R +R Y QF
Sbjct: 269 LNGTLIPVREYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMRHRAYEQF 328
Query: 304 LESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQ 363
L YK+V I+ MAK FGV+ FID EL R IA G+L C+ID V GV+E N D+KN LY+
Sbjct: 329 LTPYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNHRDSKNHLYK 388
Query: 364 ATIKQGDFLLNRIQKLSRVID 384
A IK GD LLNRIQKL+RVI+
Sbjct: 389 AVIKDGDILLNRIQKLARVIN 409
>POMBASE|SPBC582.07c [details] [associations]
symbol:rpn7 "19S proteasome regulatory subunit Rpn7"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IMP] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0031144 "proteasome
localization" evidence=IGI] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0043248 "proteasome
assembly" evidence=IGI] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 PomBase:SPBC582.07c GO:GO:0005829 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 Gene3D:1.10.10.10 InterPro:IPR011991
GenomeReviews:CU329671_GR GO:GO:0000070 GO:GO:0043248
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 GO:GO:0031144
GO:GO:0008540 GO:GO:0031595 HOGENOM:HOG000214998 KO:K03037
OMA:YTVYVCM EMBL:D89258 PIR:T37976 PIR:T43183 RefSeq:NP_595175.1
ProteinModelPortal:Q10335 STRING:Q10335 EnsemblFungi:SPBC582.07c.1
GeneID:2540794 KEGG:spo:SPBC582.07c OrthoDB:EOG40S3QF
NextBio:20801912 Uniprot:Q10335
Length = 409
Score = 778 (278.9 bits), Expect = 2.7e-77, P = 2.7e-77
Identities = 158/391 (40%), Positives = 244/391 (62%)
Query: 1 MDSEGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLV----AE 56
M + + L ++ F L+ P +++ + L +FS ++ HD+A Y+ L
Sbjct: 13 MTEKARTVSDLTISQAIFELSSPFLENKSQKALD-TLFSAIRDHDLAPLYKYLSENPKTS 71
Query: 57 SVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKA 116
+ ++ D + L+SM K E++L + D I DA+E GE E+ EA K+ +Y I D+E+
Sbjct: 72 ASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQELNGEHEILEAMKNKADYYTNICDRERG 131
Query: 117 LEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRL 176
++ T + G K+D++F ++L + Y D ++ + ++K K L E+GGDWERKNRL
Sbjct: 132 VQLCDETFERATLTGMKIDVLFSKIRLAYVYADMRVVGQLLEKLKPLIEKGGDWERKNRL 191
Query: 177 KVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKV 236
K Y+G+Y MS RNF AA L LD +STF++ EL PY + Y V++ ISLDRV +K K+
Sbjct: 192 KAYQGIYLMSIRNFSGAADLLLDCMSTFSSTELLPYYDVVRYAVISGAISLDRVDVKTKI 251
Query: 237 VDAPEILTVIGKIPYLSEF---LNSLYDCQYKSFFSAFAGL-TEQIKLDRYLYPHFRYYM 292
VD+PE+L V+ + +S +NSLY C Y FF A + +K D++L H+RYY+
Sbjct: 252 VDSPEVLAVLPQNESMSSLEACINSLYLCDYSGFFRTLADVEVNHLKCDQFLVAHYRYYV 311
Query: 293 REVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLET 352
RE+R Y+Q LESY++++I++MA +FGV+V++ID +L+ FI KL+C ID+V GV+ T
Sbjct: 312 REMRRRAYAQLLESYRALSIDSMAASFGVSVDYIDRDLASFIPDNKLNCVIDRVNGVVFT 371
Query: 353 NRPDAKNALYQATIKQGDFLLNRIQKLSRVI 383
NRPD KN YQ +KQGD LLN++QK +
Sbjct: 372 NRPDEKNRQYQEVVKQGDVLLNKLQKYQATV 402
>GENEDB_PFALCIPARUM|PF11_0303 [details] [associations]
symbol:PF11_0303 "26S proteasome regulatory
complex subunit, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0000502
"proteasome complex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000502 EMBL:AE014186
InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037
ProtClustDB:CLSZ2444089 RefSeq:XP_001347974.2
ProteinModelPortal:Q8II71 IntAct:Q8II71 MINT:MINT-1646226
PRIDE:Q8II71 EnsemblProtists:PF11_0303:mRNA GeneID:810850
KEGG:pfa:PF11_0303 EuPathDB:PlasmoDB:PF3D7_1129200 Uniprot:Q8II71
Length = 393
Score = 762 (273.3 bits), Expect = 1.3e-75, P = 1.3e-75
Identities = 146/373 (39%), Positives = 238/373 (63%)
Query: 13 LAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMRTK 72
LA +LL P++ E+ L +F +K + M +Y + E L D+ S++ K
Sbjct: 21 LADLFYLLQLPNISINERNDLLQSLFDEIKKNHMYPYYNYICQELNLNFDEEYFKSLKEK 80
Query: 73 IEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQ 132
++EL +++++++++ EN + + L K+ F+ +I DKE A ++ + T K + +G
Sbjct: 81 ADEELNQIENKLSESAENFDSLDNKNDVLLKANFFCKISDKENAFKEYEETYKKGIGMGM 140
Query: 133 KMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMSTRNFKK 192
K+D++ +++ FY D + K +++A++ E+GGDWERKN+LK+YE L + RNF +
Sbjct: 141 KLDILLTMIRICIFYNDVKNLKKYLEQARTQMEKGGDWERKNKLKIYEALNYIMIRNFAE 200
Query: 193 AASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYL 252
A+ + +D+ STFT E+ Y+ IFY V+ I++ +R L +K++++ IL + L
Sbjct: 201 ASKILIDAASTFTATEIISYEKIIFYVVILGIMTEERTVLDKKILNSSVILQITSSDEDL 260
Query: 253 SEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQFLESYKSVTI 312
+L+S Y C Y++F + ++K DRYL H+RY++R R Y QFLE +K+VT+
Sbjct: 261 HTYLHSFYHCDYRTFMEKTIKIAMRVKRDRYLGRHYRYFIRNTRVRAYKQFLEPFKNVTL 320
Query: 313 EAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFL 372
+ MA AFGV+ EFI+ E+S FIA GKL+CKIDKV G +E+N+P+ +N +YQ TIK+GD L
Sbjct: 321 KNMAFAFGVSEEFIENEISSFIANGKLNCKIDKVNGSIESNQPNERNTMYQNTIKKGDIL 380
Query: 373 LNRIQKLSRVIDL 385
LNRIQKLSRVID+
Sbjct: 381 LNRIQKLSRVIDM 393
>CGD|CAL0003998 [details] [associations]
symbol:RPN7 species:5476 "Candida albicans" [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0031595 "nuclear proteasome complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IEA] [GO:0031144 "proteasome localization"
evidence=IEA] [GO:0005198 "structural molecule activity"
evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
InterPro:IPR013026 InterPro:IPR019734 Pfam:PF01399 PROSITE:PS50005
PROSITE:PS50293 SMART:SM00088 CGD:CAL0003998 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 EMBL:AACQ01000069
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOGENOM:HOG000214998
KO:K03037 RefSeq:XP_716421.1 ProteinModelPortal:Q5A421
STRING:Q5A421 GeneID:3641909 KEGG:cal:CaO19.7286 Uniprot:Q5A421
Length = 400
Score = 708 (254.3 bits), Expect = 7.0e-70, P = 7.0e-70
Identities = 144/380 (37%), Positives = 230/380 (60%)
Query: 13 LAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAE-SVLEMDQSVLDSMRT 71
L+ K+FLL H D+++ ++ + E+ +K +A +Y L E S D+S+ + +
Sbjct: 15 LSEKQFLLQHTDLEEKDRQHIIEEILQAIKKDHLAPYYHYLHTEISDFPYDESLYRELAS 74
Query: 72 KIEDELKKLDDRIADAEENLGESEVREAHLAKSL--FYIQIGDKEKALEQLKVTESKTVA 129
+ E +++L +I +AE+ ++E+ A L +Y +I D++ A E K T
Sbjct: 75 ENEKVIEELKSKIKEAEDE-EDTELDVASTTTKLAEYYTKIIDRKNATETFKKVLELTPN 133
Query: 130 VGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMSTRN 189
G K+D + ++ FF+ D + K +++ L E+GGDWER+NR K Y G+Y ++TRN
Sbjct: 134 TGSKIDHLLTLTRIDFFFNDLPSVQKHLEQIGQLSEKGGDWERRNRFKAYNGIYMLATRN 193
Query: 190 FKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKI 249
F +AA L +DS++TFT+ EL Y+ ++ ++SL+RV LK K++D+PEIL++
Sbjct: 194 FAEAAKLLIDSLATFTSTELCSYEAIAHCAIVAGVLSLERVDLKNKIIDSPEILSIASTT 253
Query: 250 PYLSEFLN---SLYDCQYKSFFSAFAGLTEQIKL-DRYLYPHFRYYMREVRTVVYSQFLE 305
P L LN SLY C+Y FF E++ L ++YLY H +++RE+R Y+Q LE
Sbjct: 254 PNLEPLLNLTNSLYTCEYNCFFQYLLESYEKLLLPNKYLYKHANFFLREMRCKAYNQLLE 313
Query: 306 SYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQAT 365
SYKS+++++MA F ++ EF+D +L +FI KL+C IDKV G++ETNRPD KN Y A
Sbjct: 314 SYKSLSLKSMATNFNISEEFLDQDLCKFIPNKKLNCTIDKVNGIIETNRPDNKNNQYHAL 373
Query: 366 IKQGDFLLNRIQKLSRVIDL 385
IKQGD LL ++QK + L
Sbjct: 374 IKQGDNLLTKLQKYGAAVKL 393
>ASPGD|ASPL0000043868 [details] [associations]
symbol:AN1922 species:162425 "Emericella nidulans"
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IEA] [GO:0043248 "proteasome
assembly" evidence=IEA] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=IEA] [GO:0031144 "proteasome
localization" evidence=IEA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 EMBL:BN001307 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0000502 EMBL:AACD01000029 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 HOGENOM:HOG000214998 KO:K03037 OrthoDB:EOG40S3QF
RefSeq:XP_659526.1 ProteinModelPortal:Q5BC08 STRING:Q5BC08
EnsemblFungi:CADANIAT00008582 GeneID:2874584 KEGG:ani:AN1922.2
OMA:FTSYELC Uniprot:Q5BC08
Length = 484
Score = 402 (146.6 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 79/185 (42%), Positives = 123/185 (66%)
Query: 63 QSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKV 122
QS+++ R ++ E +K +D +AEE G++EV+ A ++ F+ ++GDK+KA+E +
Sbjct: 104 QSLVEDNRKELA-EFQKEED---EAEEAAGDTEVQAARGKRAEFWARVGDKDKAIESHET 159
Query: 123 TESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGL 182
KT +G K+DLV +++G F+ D + K+I++A+ L E GGDW+R+NRLK Y+GL
Sbjct: 160 LLEKTTFLGSKIDLVLAMIRIGLFFGDTLYVKKNIERAEGLIESGGDWDRRNRLKAYKGL 219
Query: 183 YCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEI 242
+ ++ R++ AA L LDS+STFT+YEL Y + Y VL +SL RV K KVVDAPEI
Sbjct: 220 HLLTVRSYSAAAPLLLDSLSTFTSYELCSYSALVIYAVLAGSLSLKRVDFKAKVVDAPEI 279
Query: 243 LTVIG 247
++G
Sbjct: 280 KAILG 284
Score = 312 (114.9 bits), Expect = 1.4e-68, Sum P(2) = 1.4e-68
Identities = 58/135 (42%), Positives = 91/135 (67%)
Query: 252 LSEFLNSLYDCQYKSFFSAFAGLTEQ-IKLDRYLYPHFRYYMREVRTVVYSQFLESYKSV 310
LS ++SLY+ Y++FF A A + + + DRYLY H +++RE+R Y Q L+SY+ V
Sbjct: 344 LSNLVSSLYNGNYRTFFLALAAVEDHFLTQDRYLYEHRAWFVREMRLRAYQQLLQSYRVV 403
Query: 311 TIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGD 370
+ +MA FGVTV+++D +L+RFI+ ++ C ID+V G++ETNRPD KN Y +K GD
Sbjct: 404 GLNSMANDFGVTVDYLDRDLARFISNNRIACTIDRVNGIIETNRPDDKNKQYADVVKHGD 463
Query: 371 FLLNRIQKLSRVIDL 385
L+ ++QK + + L
Sbjct: 464 ALITKLQKYGQAVRL 478
>SGD|S000006312 [details] [associations]
symbol:RPN7 "non-ATPase regulatory subunit of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0005198
"structural molecule activity" evidence=IMP] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0000502 "proteasome complex" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000717
InterPro:IPR011990 InterPro:IPR013026 InterPro:IPR019734
Pfam:PF01399 PROSITE:PS50005 PROSITE:PS50293 SMART:SM00088
SGD:S000006312 GO:GO:0005634 GO:GO:0005198 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:BK006949 Gene3D:1.25.40.10 GO:GO:0008541
GO:GO:0006511 EMBL:U32445 eggNOG:COG5187 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 PDB:4B4T PDBsum:4B4T
HOGENOM:HOG000214998 KO:K03037 OMA:YTVYVCM OrthoDB:EOG40S3QF
EMBL:AY692769 PIR:S59773 RefSeq:NP_015433.1
ProteinModelPortal:Q06103 DIP:DIP-2880N IntAct:Q06103
MINT:MINT-531082 STRING:Q06103 PaxDb:Q06103 PeptideAtlas:Q06103
EnsemblFungi:YPR108W GeneID:856223 KEGG:sce:YPR108W NextBio:981456
Genevestigator:Q06103 GermOnline:YPR108W Uniprot:Q06103
Length = 429
Score = 669 (240.6 bits), Expect = 9.4e-66, P = 9.4e-66
Identities = 132/332 (39%), Positives = 213/332 (64%)
Query: 59 LEMDQSVLDSMRTKIEDELKKLDDRIADAEEN-LGESEVREAHLAKSLFYIQIGDKEKAL 117
++ DQ + + + K E ++K+L+++I EE+ GE E +A + +Y QIGDK+ A
Sbjct: 92 IKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGELEQAQAWINLGEYYAQIGDKDNAE 151
Query: 118 EQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLK 177
+ L + SK ++ G K+D++ +LGFFY D + + ++ S+ E+GGDWER+NR K
Sbjct: 152 KTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLEAVNSMIEKGGDWERRNRYK 211
Query: 178 VYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVV 237
Y G++C++ RNFK+AA L +DS++TFT+ EL Y++ Y +T + +L+R LK KV+
Sbjct: 212 TYYGIHCLAVRNFKEAAKLLVDSLATFTSIELTSYESIATYASVTGLFTLERTDLKSKVI 271
Query: 238 DAPEILTVIGK---IPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD-RYLYPHFRYYMR 293
D+PE+L++I + +S SLY Y S+F + + +YL H +++R
Sbjct: 272 DSPELLSLISTTAALQSISSLTISLYASDYASYFPYLLETYANVLIPCKYLNRHADFFVR 331
Query: 294 EVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETN 353
E+R VY+Q LESYK++++++MA AFGV+V F+D +L +FI +L+C ID+V G++ETN
Sbjct: 332 EMRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFIPNKQLNCVIDRVNGIVETN 391
Query: 354 RPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 385
RPD KNA Y +KQGD LL ++QK + L
Sbjct: 392 RPDNKNAQYHLLVKQGDGLLTKLQKYGAAVRL 423
>DICTYBASE|DDB_G0283587 [details] [associations]
symbol:csn1 "COP9 signalosome complex subunit 1"
species:44689 "Dictyostelium discoideum" [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008180 "signalosome" evidence=IEA;ISS;IPI] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 dictyBase:DDB_G0283587 GO:GO:0005737 GO:GO:0043161
GenomeReviews:CM000153_GR Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AAFI02000055 GO:GO:0008180 eggNOG:COG5187 KO:K12175
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602 EMBL:DQ309429
RefSeq:XP_639011.1 ProteinModelPortal:Q54QX3 STRING:Q54QX3
PRIDE:Q54QX3 EnsemblProtists:DDB0233099 GeneID:8624141
KEGG:ddi:DDB_G0283587 ProtClustDB:CLSZ2728967 Uniprot:Q54QX3
Length = 458
Score = 304 (112.1 bits), Expect = 6.1e-27, P = 6.1e-27
Identities = 85/330 (25%), Positives = 155/330 (46%)
Query: 50 YETLVAES--VLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFY 107
Y T++ +S +LE+D ++++ K +L KL+ + A+ N+ + +R A FY
Sbjct: 79 YNTIINKSHGILELDPVYIENLSKKNSLQLDKLEQDLNTAKSNMVKDSIRFAQNDLGEFY 138
Query: 108 IQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEG 167
+IGD + AL+ T + + F ++LG ++ I KA E+
Sbjct: 139 YKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDTQNYTHAPSYIAKA----EQS 194
Query: 168 GDWERKN--RLKVYEGLYCMSTRNFKKAASLFLDSI---STFTTYELFPYDTFIFYTVLT 222
D + + +L+ GLY + +K AA F+++ S + + P D +Y L
Sbjct: 195 PDLDNVSNAKLRSVNGLYNLDGSRYKLAARKFIETPFEQSNVFSDIISPQD-IAYYGGLC 253
Query: 223 SIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDR 282
++ + DR LK+KV+D P + +P L E +N Y+ +Y S + + LD
Sbjct: 254 ALATFDRNELKKKVIDDPMFKNYLELVPELRELINDFYNTKYGSCLKYLDKMKPILLLDI 313
Query: 283 YLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCK 342
+LY H + +R+ Q+ Y+SV + MA AF TV ++ E+S+ I ++ +
Sbjct: 314 HLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFNTTVTLLEKEISKLIMENEIQAR 373
Query: 343 IDKVAGVLETNRPDAKNALYQATIKQG-DF 371
ID L + D + ++ T++ G DF
Sbjct: 374 IDSHNKRLYARKADQRTTTFEKTVQVGSDF 403
>ZFIN|ZDB-GENE-041111-240 [details] [associations]
symbol:gps1 "G protein pathway suppressor 1"
species:7955 "Danio rerio" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
ZFIN:ZDB-GENE-041111-240 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 HOGENOM:HOG000091977 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 HOVERGEN:HBG030722
EMBL:BX897685 IPI:IPI00774251 UniGene:Dr.52385
Ensembl:ENSDART00000141106 Uniprot:B0S7K9
Length = 490
Score = 250 (93.1 bits), Expect = 5.0e-19, P = 5.0e-19
Identities = 72/328 (21%), Positives = 146/328 (44%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
V E +E +D + +S R K +L+KLD + + + N + +R H Y+
Sbjct: 115 VPEGAVEPPPLDTAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 174
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 175 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 234
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVL 221
G+ + +N +LK G +++R +K AA FL + + EL Y L
Sbjct: 235 GERDSQNQAVLTKLKCAAGKAELASRKYKPAAKCFLQASFDHCDFPELLSPSNVAVYGGL 294
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 295 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 354
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G ++
Sbjct: 355 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMNKMAVAFNTTVAALEDELTQLILEGLINA 414
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
+ID + +L D ++ ++ +++ G
Sbjct: 415 RIDSHSKILYARDVDQRSTTFEKSLQMG 442
>UNIPROTKB|F1P996 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
OMA:CPPLRVE InterPro:IPR019585 Pfam:PF10602
GeneTree:ENSGT00510000046608 EMBL:AAEX03006161
Ensembl:ENSCAFT00000009593 Uniprot:F1P996
Length = 433
Score = 244 (91.0 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 71/328 (21%), Positives = 147/328 (44%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 58 IPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 117
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 118 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 177
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVL 221
G+ + + +LK GL ++ R +K+AA FL + + EL Y L
Sbjct: 178 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGL 237
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 238 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 297
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G ++
Sbjct: 298 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINA 357
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
+ID + +L D ++ ++ ++ G
Sbjct: 358 RIDSHSKILYARDVDQRSTTFEKSLLMG 385
>MGI|MGI:2384801 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10090
"Mus musculus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0008180 "signalosome" evidence=ISO;IDA]
[GO:0010388 "cullin deneddylation" evidence=ISO] InterPro:IPR000717
InterPro:IPR011990 Pfam:PF01399 SMART:SM00088 MGI:MGI:2384801
GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 EMBL:AL663090 GO:GO:0010388
eggNOG:COG5187 InterPro:IPR019585 Pfam:PF10602 HOVERGEN:HBG030722
EMBL:AK088490 EMBL:BC003350 IPI:IPI00116793 IPI:IPI00480341
UniGene:Mm.30195 ProteinModelPortal:Q99LD4 STRING:Q99LD4
PhosphoSite:Q99LD4 PaxDb:Q99LD4 PRIDE:Q99LD4 NextBio:372621
Bgee:Q99LD4 CleanEx:MM_GPS1 Genevestigator:Q99LD4
GermOnline:ENSMUSG00000025156 Uniprot:Q99LD4
Length = 471
Score = 244 (91.0 bits), Expect = 2.3e-18, P = 2.3e-18
Identities = 71/328 (21%), Positives = 147/328 (44%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 96 IPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 155
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 156 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 215
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVL 221
G+ + + +LK GL ++ R +K+AA FL + + EL Y L
Sbjct: 216 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGL 275
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 276 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 335
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G ++
Sbjct: 336 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLINA 395
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
+ID + +L D ++ ++ ++ G
Sbjct: 396 RIDSHSKILYARDVDQRSTTFEKSLLMG 423
>UNIPROTKB|F1MP10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010388 "cullin deneddylation" evidence=IEA]
[GO:0008180 "signalosome" evidence=IEA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0008180 GO:GO:0010388 OMA:CPPLRVE InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:DAAA02049401
IPI:IPI00867147 Ensembl:ENSBTAT00000025728 ArrayExpress:F1MP10
Uniprot:F1MP10
Length = 478
Score = 244 (91.0 bits), Expect = 2.4e-18, P = 2.4e-18
Identities = 71/328 (21%), Positives = 147/328 (44%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 103 IPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 162
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 163 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 222
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVL 221
G+ + + +LK GL ++ R +K+AA FL + + EL Y L
Sbjct: 223 GERDTQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGL 282
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 283 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 342
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G ++
Sbjct: 343 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMRKMATAFNTTVAALEDELTQLILEGLINA 402
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
+ID + +L D ++ ++ ++ G
Sbjct: 403 RIDSHSKILYARDVDQRSTTFEKSLLMG 430
>RGD|621532 [details] [associations]
symbol:Gps1 "G protein pathway suppressor 1" species:10116
"Rattus norvegicus" [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008180 "signalosome"
evidence=IEA;ISO] [GO:0010388 "cullin deneddylation" evidence=ISO]
InterPro:IPR000717 InterPro:IPR011990 Pfam:PF01399 SMART:SM00088
RGD:621532 GO:GO:0005737 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 KO:K12175 InterPro:IPR019585
Pfam:PF10602 CTD:2873 HOVERGEN:HBG030722 EMBL:X87885 EMBL:BC061746
IPI:IPI00208644 PIR:S57449 RefSeq:NP_001257868.1 RefSeq:NP_446421.3
UniGene:Rn.16873 PhosphoSite:P97834 PRIDE:P97834 GeneID:117039
KEGG:rno:117039 NextBio:619843 Genevestigator:P97834 Uniprot:P97834
Length = 471
Score = 243 (90.6 bits), Expect = 3.0e-18, P = 3.0e-18
Identities = 71/328 (21%), Positives = 147/328 (44%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 96 IPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 155
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 156 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 215
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVL 221
G+ + + +LK GL ++ R +K+AA FL + + EL Y L
Sbjct: 216 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGL 275
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 276 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 335
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G ++
Sbjct: 336 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLINA 395
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
+ID + +L D ++ ++ ++ G
Sbjct: 396 RIDSHSKILYARDVDQRSTTFEKSLLMG 423
>UNIPROTKB|F1NB10 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00580463 PRIDE:F1NB10 Ensembl:ENSGALT00000004462
ArrayExpress:F1NB10 Uniprot:F1NB10
Length = 487
Score = 243 (90.6 bits), Expect = 3.4e-18, P = 3.4e-18
Identities = 68/318 (21%), Positives = 142/318 (44%)
Query: 61 MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQL 120
+D + +++ R K +L+KLD + + + N + +R H Y+ GD AL+
Sbjct: 122 LDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 181
Query: 121 KVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEGGDWERKN--- 174
+ +++ +++ + ++ + + KA+S + E+ G+ + +
Sbjct: 182 SRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAI 241
Query: 175 --RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVLTSIISLDRVS 231
+LK GL ++ R +K+AA FL + + EL Y L ++ + DR
Sbjct: 242 LTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQE 301
Query: 232 LKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYY 291
L++ V+ + + P + + + Y+ +Y S + + + LD YL PH R
Sbjct: 302 LQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTL 361
Query: 292 MREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLE 351
++R Q+ Y S + MA AF TV ++ EL++ I G ++ +ID + +L
Sbjct: 362 YTQIRNRALIQYFSPYVSADMHKMATAFNTTVAALEDELTQLILEGLINARIDSHSKILY 421
Query: 352 TNRPDAKNALYQATIKQG 369
D ++ ++ ++ G
Sbjct: 422 ARDVDQRSTTFEKSLLMG 439
>UNIPROTKB|F1NJQ7 [details] [associations]
symbol:GPS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008180 "signalosome" evidence=IEA] [GO:0010388 "cullin
deneddylation" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10 InterPro:IPR011991
Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388 InterPro:IPR019585
Pfam:PF10602 GeneTree:ENSGT00510000046608 EMBL:AADN02029975
IPI:IPI00818730 Ensembl:ENSGALT00000038889 OMA:SHERARS
ArrayExpress:F1NJQ7 Uniprot:F1NJQ7
Length = 491
Score = 243 (90.6 bits), Expect = 3.5e-18, P = 3.5e-18
Identities = 68/318 (21%), Positives = 142/318 (44%)
Query: 61 MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQL 120
+D + +++ R K +L+KLD + + + N + +R H Y+ GD AL+
Sbjct: 126 LDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDLSNALKCY 185
Query: 121 KVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEGGDWERKN--- 174
+ +++ +++ + ++ + + KA+S + E+ G+ + +
Sbjct: 186 SRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGERDSQTQAI 245
Query: 175 --RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVLTSIISLDRVS 231
+LK GL ++ R +K+AA FL + + EL Y L ++ + DR
Sbjct: 246 LTKLKCAAGLAELAARKYKQAAKCFLLASFDHCDFPELLSPSNVAVYGGLCALATFDRQE 305
Query: 232 LKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYY 291
L++ V+ + + P + + + Y+ +Y S + + + LD YL PH R
Sbjct: 306 LQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYLAPHVRTL 365
Query: 292 MREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLE 351
++R Q+ Y S + MA AF TV ++ EL++ I G ++ +ID + +L
Sbjct: 366 YTQIRNRALIQYFSPYVSADMHKMATAFNTTVAALEDELTQLILEGLINARIDSHSKILY 425
Query: 352 TNRPDAKNALYQATIKQG 369
D ++ ++ ++ G
Sbjct: 426 ARDVDQRSTTFEKSLLMG 443
>UNIPROTKB|C9JFE4 [details] [associations]
symbol:GPS1 "G protein pathway suppressor 1, isoform CRA_b"
species:9606 "Homo sapiens" [GO:0008180 "signalosome" evidence=IEA]
InterPro:IPR000717 Pfam:PF01399 SMART:SM00088 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:CH471099 HOGENOM:HOG000091977
InterPro:IPR019585 Pfam:PF10602 EMBL:AC135056 IPI:IPI00300386
UniGene:Hs.268530 HGNC:HGNC:4549 ChiTaRS:GPS1 STRING:C9JFE4
Ensembl:ENST00000320548 OrthoDB:EOG469QTM Uniprot:C9JFE4
Length = 471
Score = 241 (89.9 bits), Expect = 5.4e-18, P = 5.4e-18
Identities = 71/328 (21%), Positives = 145/328 (44%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 96 IPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 155
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 156 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 215
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAAS-LFLDSISTFTTYELFPYDTFIFYTVL 221
G+ + + +LK GL ++ R +K+AA L L S EL Y L
Sbjct: 216 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGL 275
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 276 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 335
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G +
Sbjct: 336 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISA 395
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
++D + +L D ++ ++ ++ G
Sbjct: 396 RVDSHSKILYARDVDQRSTTFEKSLLMG 423
>UNIPROTKB|Q13098 [details] [associations]
symbol:GPS1 "COP9 signalosome complex subunit 1"
species:9606 "Homo sapiens" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008180 "signalosome" evidence=IDA] [GO:0010388 "cullin
deneddylation" evidence=IDA] [GO:0000188 "inactivation of MAPK
activity" evidence=TAS] [GO:0005095 "GTPase inhibitor activity"
evidence=TAS] [GO:0007049 "cell cycle" evidence=TAS] [GO:0007254
"JNK cascade" evidence=TAS] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0000188
GO:GO:0007254 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0007049
GO:GO:0005095 Gene3D:1.25.40.10 GO:GO:0008180 GO:GO:0010388
eggNOG:COG5187 HOGENOM:HOG000091977 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 EMBL:U20285 EMBL:AK093283
EMBL:AC135056 EMBL:BC000155 EMBL:BC064503 EMBL:BT009834
IPI:IPI00156282 IPI:IPI00300386 IPI:IPI00414289 IPI:IPI00921488
PIR:G01646 RefSeq:NP_004118.3 RefSeq:NP_997657.1 UniGene:Hs.268530
ProteinModelPortal:Q13098 DIP:DIP-42077N IntAct:Q13098
MINT:MINT-1203964 STRING:Q13098 PhosphoSite:Q13098 DMDM:223590263
PaxDb:Q13098 PRIDE:Q13098 DNASU:2873 Ensembl:ENST00000306823
Ensembl:ENST00000355130 Ensembl:ENST00000392358
Ensembl:ENST00000578552 GeneID:2873 KEGG:hsa:2873 UCSC:uc002kdk.1
UCSC:uc002kdl.1 UCSC:uc002kdm.1 CTD:2873 GeneCards:GC17P080009
HGNC:HGNC:4549 MIM:601934 neXtProt:NX_Q13098 PharmGKB:PA28944
HOVERGEN:HBG030722 ChiTaRS:GPS1 GenomeRNAi:2873 NextBio:11339
ArrayExpress:Q13098 Bgee:Q13098 CleanEx:HS_GPS1
Genevestigator:Q13098 GermOnline:ENSG00000169727 Uniprot:Q13098
Length = 491
Score = 241 (89.9 bits), Expect = 6.1e-18, P = 6.1e-18
Identities = 71/328 (21%), Positives = 145/328 (44%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 116 IPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 175
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 176 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 235
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAAS-LFLDSISTFTTYELFPYDTFIFYTVL 221
G+ + + +LK GL ++ R +K+AA L L S EL Y L
Sbjct: 236 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGL 295
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 296 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 355
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G +
Sbjct: 356 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISA 415
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
++D + +L D ++ ++ ++ G
Sbjct: 416 RVDSHSKILYARDVDQRSTTFEKSLLMG 443
>TAIR|locus:2098851 [details] [associations]
symbol:FUS6 "FUSCA 6" species:3702 "Arabidopsis thaliana"
[GO:0005634 "nucleus" evidence=ISM;ISS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008180 "signalosome" evidence=TAS;IPI]
[GO:0009640 "photomorphogenesis" evidence=RCA;TAS] [GO:0000338
"protein deneddylation" evidence=TAS] [GO:0006461 "protein complex
assembly" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0009646 "response to absence of light"
evidence=IEP] [GO:0009651 "response to salt stress" evidence=IEP]
[GO:0010388 "cullin deneddylation" evidence=RCA;IMP] [GO:0005829
"cytosol" evidence=IDA] [GO:0000003 "reproduction" evidence=RCA]
[GO:0006325 "chromatin organization" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007131 "reciprocal
meiotic recombination" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=IMP;RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009880 "embryonic pattern
specification" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010072 "primary shoot apical
meristem specification" evidence=RCA] [GO:0010090 "trichome
morphogenesis" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010431 "seed maturation"
evidence=RCA] [GO:0010564 "regulation of cell cycle process"
evidence=RCA] [GO:0010638 "positive regulation of organelle
organization" evidence=RCA] [GO:0016567 "protein ubiquitination"
evidence=RCA] [GO:0016571 "histone methylation" evidence=RCA]
[GO:0016579 "protein deubiquitination" evidence=RCA] [GO:0019915
"lipid storage" evidence=RCA] [GO:0033044 "regulation of chromosome
organization" evidence=RCA] [GO:0045595 "regulation of cell
differentiation" evidence=RCA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=RCA] [GO:0048366 "leaf
development" evidence=RCA] [GO:0048825 "cotyledon development"
evidence=RCA] [GO:0050826 "response to freezing" evidence=RCA]
[GO:0051301 "cell division" evidence=RCA] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005829 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0006461 GO:GO:0009651
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0009793 GO:GO:0006972
GO:GO:0009646 EMBL:AL137898 GO:GO:0009585 GO:GO:0008180
GO:GO:0010388 EMBL:L26498 EMBL:AF395057 EMBL:AF360295 EMBL:AK117532
EMBL:AY051056 EMBL:AJ243015 IPI:IPI00545799 PIR:T47906
RefSeq:NP_567109.1 UniGene:At.303 ProteinModelPortal:P45432
IntAct:P45432 STRING:P45432 PaxDb:P45432 PRIDE:P45432
EnsemblPlants:AT3G61140.1 GeneID:825286 KEGG:ath:AT3G61140
TAIR:At3g61140 eggNOG:COG5187 HOGENOM:HOG000091977
InParanoid:P45432 KO:K12175 OMA:CPPLRVE PhylomeDB:P45432
ProtClustDB:CLSN2689283 Genevestigator:P45432 GermOnline:AT3G61140
InterPro:IPR019585 Pfam:PF10602 Uniprot:P45432
Length = 441
Score = 231 (86.4 bits), Expect = 6.6e-17, P = 6.6e-17
Identities = 76/318 (23%), Positives = 142/318 (44%)
Query: 61 MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYI---QIGDKEKAL 117
MD + +++ + E + KL++ ++ NL + +R + FY +GD K
Sbjct: 103 MDLAWCEAVDRRAEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNY 162
Query: 118 EQLK--VTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNR 175
+ + T +K + + M+ + ++++G F ++ ++KA+ E +
Sbjct: 163 IRTRDYCTTTKHI-IHMCMNAILVSIEMG----QFTHVTSYVNKAEQNPETLEPMVNA-K 216
Query: 176 LKVYEGLYCMSTRNFKKAASLFLD-SISTFTTYE--LFPYDTFIFYTVLTSIISLDRVSL 232
L+ GL + + +K AA FLD + +Y + P D Y L ++ S DR L
Sbjct: 217 LRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQD-IATYGGLCALASFDRSEL 275
Query: 233 KQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYM 292
KQKV+D + +P + E +N Y +Y S A L + LD +L+ H
Sbjct: 276 KQKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLY 335
Query: 293 REVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLET 352
++R Q+ + SV + MA AF +V ++ EL I ++ +ID +L
Sbjct: 336 DQIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYA 395
Query: 353 NRPDAKNALYQATIKQGD 370
D +NA +Q ++ G+
Sbjct: 396 RHADQRNATFQKVLQMGN 413
>FB|FBgn0027057 [details] [associations]
symbol:CSN1b "COP9 complex homolog subunit 1 b" species:7227
"Drosophila melanogaster" [GO:0008277 "regulation of G-protein
coupled receptor protein signaling pathway" evidence=ISS]
[GO:0008180 "signalosome" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=IMP] [GO:0007095 "mitotic G2 DNA damage
checkpoint" evidence=IGI] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0046331 "lateral inhibition" evidence=IMP] InterPro:IPR000717
Pfam:PF01399 SMART:SM00088 GO:GO:0005737 GO:GO:0007095
GO:GO:0050821 EMBL:AE014296 GO:GO:0022008 GO:GO:0048477
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0046331 GO:GO:0008180
GO:GO:0000338 eggNOG:COG5187 KO:K12175 OMA:CPPLRVE
InterPro:IPR019585 Pfam:PF10602 GeneTree:ENSGT00510000046608
EMBL:AF129080 EMBL:AY051972 RefSeq:NP_524152.2 UniGene:Dm.2527
ProteinModelPortal:Q9VVU5 STRING:Q9VVU5 PaxDb:Q9VVU5 PRIDE:Q9VVU5
EnsemblMetazoa:FBtr0075074 GeneID:40063 KEGG:dme:Dmel_CG3889
CTD:40063 FlyBase:FBgn0027057 InParanoid:Q9VVU5 OrthoDB:EOG4PVMDW
PhylomeDB:Q9VVU5 GenomeRNAi:40063 NextBio:816813 Bgee:Q9VVU5
GermOnline:CG3889 GO:GO:0019781 Uniprot:Q9VVU5
Length = 525
Score = 225 (84.3 bits), Expect = 5.6e-16, P = 5.6e-16
Identities = 67/322 (20%), Positives = 138/322 (42%)
Query: 54 VAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDK 113
V + D + +D+ K +L+KLD + + + N + +R H + Y+ GD
Sbjct: 151 VEKDAFAYDAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDL 210
Query: 114 EKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSL--FEEGG--- 168
AL+ + +++ +++ + ++ + I KA+S F EG
Sbjct: 211 TNALKCYSRARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAEGSKEA 270
Query: 169 DWERKNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVLTSIISL 227
+ + RL+ GL + + +K AA FL++ + E+ Y L ++ +
Sbjct: 271 NAQVHTRLECAAGLAELQQKKYKVAAKHFLNANFDHCDFPEMISTSNVAVYGGLCALATF 330
Query: 228 DRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPH 287
DR LK+ V+ + + P L + + Y+ +Y S + + + + +D Y+ PH
Sbjct: 331 DRQELKRLVIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPH 390
Query: 288 FRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVA 347
++R Q+ Y S + MA AF +V ++ E+ + I G++ +ID
Sbjct: 391 VTTLYTKIRNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHN 450
Query: 348 GVLETNRPDAKNALYQATIKQG 369
+L D +N+ ++ + G
Sbjct: 451 KILFAKEADQRNSTFERALIMG 472
>CGD|CAL0003109 [details] [associations]
symbol:RPN6 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043248 "proteasome assembly"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR000717 InterPro:IPR011990
Pfam:PF01399 SMART:SM00088 CGD:CAL0003109 Gene3D:1.10.10.10
InterPro:IPR011991 Gene3D:1.25.40.10 InterPro:IPR013143
SMART:SM00753 EMBL:AACQ01000138 KO:K03036 RefSeq:XP_709940.1
ProteinModelPortal:Q59TR9 STRING:Q59TR9 GeneID:3645352
KEGG:cal:CaO19.1299 Uniprot:Q59TR9
Length = 435
Score = 113 (44.8 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 44/212 (20%), Positives = 91/212 (42%)
Query: 176 LKVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIF-YTVLTSIISLDRVSLKQ 234
L G+ +++K A S F +S F + + P + Y +LT I+ L+ +
Sbjct: 224 LDCQSGILNSEDKDYKTAFSYFYESFEGFNSQD-DPRSIIVLKYMLLTKIM-LNLIDDVN 281
Query: 235 KVVDAPEILTVIGK-IPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMR 293
+++ ++ K I + + + K F ++ ++K D + HF
Sbjct: 282 NILNNKNVIKYKSKDIDAMKSIAMAYSNRSLKEFENSLLTYANELKSDAIIKNHFNALYD 341
Query: 294 EVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETN 353
+ + +ESY V + ++K G+ ++ ++ +LS+ I + +D+ G L
Sbjct: 342 NLLEQNLLKIIESYSCVELSHISKVIGLNLQQVEGKLSQMILDKVFYGVLDQGNGWLIIY 401
Query: 354 RPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 385
K+A Y+A+ L ++ LS V+DL
Sbjct: 402 DEPRKDAAYEAS-------LELVKNLSNVVDL 426
Score = 75 (31.5 bits), Expect = 5.3e-07, Sum P(2) = 5.3e-07
Identities = 28/99 (28%), Positives = 55/99 (55%)
Query: 52 TLVAESVLEMDQSVLDSMRT-KIEDELKKLDDRIADAEENLGE-SEVREAHLAKSLF--Y 107
T A+ + + + ++L+ + + +E KL D IAD+ LG ++ + A + K+L +
Sbjct: 47 TTTAKQLQQQESAILELGKIYETLNEPTKLSDLIADSRSILGNFAKSKTAKIVKTLIEDF 106
Query: 108 IQIGDK-EKALE-QLKVTESKTV-AVGQKMDLVFYTLQL 143
++ K EK+L+ Q+ VT+S A+ K+ + +LQL
Sbjct: 107 DKLSAKDEKSLDIQIDVTKSSMQWAIESKLSFLRQSLQL 145
Score = 45 (20.9 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 76 ELKKLDDRIADAEENLGESEVREA 99
E KKLDD+ + E L ES++ A
Sbjct: 170 EYKKLDDKSSLVEVQLLESKIYHA 193
>POMBASE|SPBC215.03c [details] [associations]
symbol:csn1 "COP9/signalosome complex subunit Csn1"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] [GO:0008180
"signalosome" evidence=IEA] [GO:0010388 "cullin deneddylation"
evidence=NAS] [GO:0030163 "protein catabolic process" evidence=IGI]
[GO:0051445 "regulation of meiotic cell cycle" evidence=IMP]
[GO:0060625 "regulation of protein deneddylation" evidence=IMP]
[GO:0090329 "regulation of DNA-dependent DNA replication"
evidence=IMP] InterPro:IPR000717 Pfam:PF01399 SMART:SM00088
PomBase:SPBC215.03c GO:GO:0005829 EMBL:CU329671 Gene3D:1.10.10.10
InterPro:IPR011991 GenomeReviews:CU329671_GR GO:GO:0006974
GO:GO:0030163 GO:GO:0008180 GO:GO:0051445 GO:GO:0010388 KO:K12175
InterPro:IPR019585 Pfam:PF10602 eggNOG:NOG325807 OrthoDB:EOG4GTPP1
EMBL:AF314169 EMBL:AB027783 PIR:T39893 RefSeq:NP_596680.1
IntAct:O94308 STRING:O94308 EnsemblFungi:SPBC215.03c.1
GeneID:2540352 KEGG:spo:SPBC215.03c OMA:MFRNLIR NextBio:20801480
GO:GO:0090329 GO:GO:0060625 Uniprot:O94308
Length = 422
Score = 143 (55.4 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 63/290 (21%), Positives = 117/290 (40%)
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
++D ++S+ + L++L + + NL +R A L + F+ +G + AL
Sbjct: 75 QLDVEWVESVTFHRKQNLEQLRRELKAYKNNLIRESIRAAQLDLASFFADVGQFDSALRS 134
Query: 120 L-KVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKV 178
KV E T A GQ L +++ + ++ + +AKS E + +
Sbjct: 135 YAKVREYCTNA-GQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTVSAA--MELTSPIYA 191
Query: 179 YEGL--YCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKV 236
Y GL +C+ ++++A + FL + T T+ + Y L ++ D L Q++
Sbjct: 192 YCGLANFCLG--DYEEALAHFL-KVETDTSDGIITKTDISVYISLCALACWDHKRLIQEL 248
Query: 237 VDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVR 296
E + P L L + + +Y + LD YL P +R
Sbjct: 249 ERNEEFNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQNAQDYSLDMYLAPQLTNLFSLIR 308
Query: 297 TVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKV 346
+L Y ++ +A F + FI+ L I A KL+ K+D +
Sbjct: 309 ERSLLDYLIPYSALPFSKIAVDFHIDENFIEKNLLEIIEAKKLNGKVDSL 358
>ASPGD|ASPL0000047276 [details] [associations]
symbol:csnA species:162425 "Emericella nidulans"
[GO:0008180 "signalosome" evidence=IDA] [GO:0070791 "cleistothecium
development" evidence=IMP] [GO:0090329 "regulation of DNA-dependent
DNA replication" evidence=IEA] [GO:0060625 "regulation of protein
deneddylation" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0051445 "regulation of meiotic cell cycle"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR000717 Pfam:PF01399
SMART:SM00088 GO:GO:0005737 EMBL:BN001307 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0008180 EMBL:AACD01000022
HOGENOM:HOG000091977 KO:K12175 OMA:CPPLRVE InterPro:IPR019585
Pfam:PF10602 eggNOG:NOG325807 EMBL:AY574249 RefSeq:XP_659095.1
STRING:Q5BD89 EnsemblFungi:CADANIAT00008114 GeneID:2874595
KEGG:ani:AN1491.2 OrthoDB:EOG4GTPP1 Uniprot:Q5BD89
Length = 498
Score = 136 (52.9 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 63/328 (19%), Positives = 137/328 (41%)
Query: 61 MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQL 120
+D ++ + ++ E +L+ + + NL + +R + Y +IGD A +
Sbjct: 120 IDSDWVERSQKVVKAETDRLEHELRGYKNNLIKESIRMGNEELGQHYHRIGDLTSAFKAY 179
Query: 121 KVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWER--KNRLKV 178
++F + + D+ + ++ + +S +GG E K++ K+
Sbjct: 180 SRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSNVHRLRS---QGGKPEEQAKHQPKI 236
Query: 179 YE--GLYCMSTRNFKKAASLFLDSISTF--TTYELFPYDTFIFYTVLTSIISLDRVSLKQ 234
GL + + ++ +AA+ F+ + + T E+ + Y L ++ S+DR L++
Sbjct: 237 SAAMGLSQLHSGSYLEAANSFIATDPSLGDTFNEVLTSNDVAVYGGLCALASMDRNELQR 296
Query: 235 KVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMRE 294
+V+D + P++ ++ + +++ LD +L H +
Sbjct: 297 RVLDNSSFRNFLELEPHIRRAISFFCNSKFRPCLEILEAYRADYLLDIHLQRHVQVLYNR 356
Query: 295 VRTVVYSQFLESYKSVTIEAMAKAFGV---TVE---------FIDVELSRFIAAGKLHCK 342
+RT Q+L + V++E+MAK F + T + F+ EL I G L +
Sbjct: 357 IRTKSIQQYLIPFNRVSLESMAKIFVLGNPTSQSSQSDSKSAFVQ-ELISLIQDGTLDAR 415
Query: 343 IDKVAGVLETNRPDAKNALYQATIKQGD 370
ID VL + + D + + +A + D
Sbjct: 416 IDLEKHVLVSTQGDKRIEVQEAVLDSLD 443
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.136 0.379 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 385 385 0.00092 117 3 11 22 0.36 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 34
No. of states in DFA: 590 (63 KB)
Total size of DFA: 209 KB (2117 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 33.10u 0.11s 33.21t Elapsed: 00:00:02
Total cpu time: 33.11u 0.11s 33.22t Elapsed: 00:00:02
Start: Mon May 20 19:00:12 2013 End: Mon May 20 19:00:14 2013