BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016653
(385 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q93Y35|PSMD6_ARATH Probable 26S proteasome non-ATPase regulatory subunit 6
OS=Arabidopsis thaliana GN=At4g24820 PE=2 SV=1
Length = 387
Score = 683 bits (1763), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 326/383 (85%), Positives = 360/383 (93%)
Query: 3 SEGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMD 62
+EG+QQ HL+LA+K FLLTHPDV DIEKV LK EV +++H MA YETL+A SVL++D
Sbjct: 5 AEGSQQPHLILANKLFLLTHPDVPDIEKVQLKSEVLDFIRSHGMAPLYETLIASSVLDLD 64
Query: 63 QSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKV 122
QS+L+SMR E+ELKKLD++IADAEENLGESEVREAHLAK+L++I+I DKEKALEQLK+
Sbjct: 65 QSLLESMRAANEEELKKLDEKIADAEENLGESEVREAHLAKALYFIRISDKEKALEQLKL 124
Query: 123 TESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGL 182
TE KTVAVGQKMD+VFYTLQL FFYMDFDL+SKSIDKAK LFEEGGDWERKNRLKVYEGL
Sbjct: 125 TEGKTVAVGQKMDVVFYTLQLAFFYMDFDLVSKSIDKAKKLFEEGGDWERKNRLKVYEGL 184
Query: 183 YCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEI 242
YCMSTRNFKKAASLFLDSISTFTTYE+FPY+TFIFYTVLTSII+LDRVSLKQKVVDAPEI
Sbjct: 185 YCMSTRNFKKAASLFLDSISTFTTYEIFPYETFIFYTVLTSIITLDRVSLKQKVVDAPEI 244
Query: 243 LTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQ 302
LTV+GKIP+LSEFLNSLY+CQYK+FFSAFAG+ QIK DRYLYPHFR+YMREVRTVVYSQ
Sbjct: 245 LTVLGKIPFLSEFLNSLYECQYKAFFSAFAGMAVQIKYDRYLYPHFRFYMREVRTVVYSQ 304
Query: 303 FLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALY 362
FLESYKSVT+EAMAKAFGV+V+FID ELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALY
Sbjct: 305 FLESYKSVTVEAMAKAFGVSVDFIDQELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALY 364
Query: 363 QATIKQGDFLLNRIQKLSRVIDL 385
QATIKQGDFLLNRIQKLSRVIDL
Sbjct: 365 QATIKQGDFLLNRIQKLSRVIDL 387
>sp|Q8W425|PSMD6_ORYSJ 26S proteasome non-ATPase regulatory subunit 6 OS=Oryza sativa
subsp. japonica GN=RPN7 PE=2 SV=1
Length = 389
Score = 672 bits (1733), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 322/382 (84%), Positives = 355/382 (92%)
Query: 4 EGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQ 63
EG QQ HLVLAHK FLL+HPDV D+ KV L+ +V + VK+ DMAS YE+L A VLE D
Sbjct: 8 EGKQQPHLVLAHKLFLLSHPDVDDLAKVDLRADVLAAVKSDDMASLYESLGAGGVLETDA 67
Query: 64 SVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVT 123
++L MR +IE+E++KLD++IADAEENLGESEVREAHLAKSL++I++G+KEKALEQLKVT
Sbjct: 68 ALLAEMRGRIEEEIRKLDEKIADAEENLGESEVREAHLAKSLYFIRVGEKEKALEQLKVT 127
Query: 124 ESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLY 183
E KTVAVGQKMDLVF+TLQ+GFFYMDFDLISKSIDKAK LFEEGGDWERKNRLKVYEGLY
Sbjct: 128 EGKTVAVGQKMDLVFHTLQIGFFYMDFDLISKSIDKAKKLFEEGGDWERKNRLKVYEGLY 187
Query: 184 CMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEIL 243
CM+TRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTS+ISLDRVSLK KVVDAPEIL
Sbjct: 188 CMATRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSVISLDRVSLKAKVVDAPEIL 247
Query: 244 TVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQF 303
VIGK+P+LSEFLNSLY+CQYKSFF+AF+GLTEQIKLDRYL PHFRYYMREVRTVVYSQF
Sbjct: 248 AVIGKVPHLSEFLNSLYNCQYKSFFAAFSGLTEQIKLDRYLQPHFRYYMREVRTVVYSQF 307
Query: 304 LESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQ 363
LESYKSVT+EAMA AFGVTV+FID+ELSRFIAAGKLHCKIDKVA VLETNRPDA+NA YQ
Sbjct: 308 LESYKSVTMEAMASAFGVTVDFIDLELSRFIAAGKLHCKIDKVACVLETNRPDARNAFYQ 367
Query: 364 ATIKQGDFLLNRIQKLSRVIDL 385
ATIKQGDFLLNRIQKLSRVIDL
Sbjct: 368 ATIKQGDFLLNRIQKLSRVIDL 389
>sp|Q15008|PSMD6_HUMAN 26S proteasome non-ATPase regulatory subunit 6 OS=Homo sapiens
GN=PSMD6 PE=1 SV=1
Length = 389
Score = 425 bits (1093), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/386 (52%), Positives = 288/386 (74%), Gaps = 3/386 (0%)
Query: 1 MDSEG-TQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVRDELMAAVRDNNMAPYYEALCKSLDW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
++D +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+ + +IGDKE AL
Sbjct: 64 QIDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAVVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDKV ++ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGDLLLNRVQKLSRVINM 389
>sp|Q3T0B2|PSMD6_BOVIN 26S proteasome non-ATPase regulatory subunit 6 OS=Bos taurus
GN=PSMD6 PE=2 SV=1
Length = 389
Score = 425 bits (1092), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/386 (52%), Positives = 287/386 (74%), Gaps = 3/386 (0%)
Query: 1 MDSEG-TQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVRDELMAAVRDNNMAPYYEALCKSLEW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+MD +L+ M+ EDELK+LD+ + DAE+NLGESE+R+A +AK+ + +IGDKE AL
Sbjct: 64 QMDVDLLNKMKKANEDELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCRIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRRTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV VEFID ELSRFIAAG+LHCKIDKV V+ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVEFIDQELSRFIAAGRLHCKIDKVNEVVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+G LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGGLLLNRVQKLSRVINM 389
>sp|Q99JI4|PSMD6_MOUSE 26S proteasome non-ATPase regulatory subunit 6 OS=Mus musculus
GN=Psmd6 PE=1 SV=1
Length = 389
Score = 424 bits (1091), Expect = e-118, Method: Compositional matrix adjust.
Identities = 203/386 (52%), Positives = 287/386 (74%), Gaps = 3/386 (0%)
Query: 1 MDSEG-TQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
++ EG + L +A RFLL+ P+ + ++ E+ + V+ ++MA +YE L
Sbjct: 6 LEEEGLPKNPDLRIAQLRFLLSLPEHRG--DAAVREELMAAVRENNMAPYYEALCKSLDW 63
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
+MD +L M+ E+ELK+LD+ + DAE+NLGESE+R+A +AK+ + QIGDKE AL
Sbjct: 64 QMDVDLLSKMKKANEEELKRLDEELEDAEKNLGESEIRDAMMAKAEYLCQIGDKEGALTA 123
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
+ T KTVA+G ++D+VFY L++G FYMD DLI+++ +KAKSL EEGGDW+R+NRLKVY
Sbjct: 124 FRKTYDKTVALGHRLDIVFYLLRIGLFYMDNDLITRNTEKAKSLIEEGGDWDRRNRLKVY 183
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
+GLYC++ R+FK+AA LFLD++STFT+YEL Y TF+ YTV S+I+L+R L++KV+
Sbjct: 184 QGLYCVAIRDFKQAAELFLDTVSTFTSYELMDYKTFVTYTVYVSMIALERPDLREKVIKG 243
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
EIL V+ +P + ++L SLY+C+Y FF + A + +++K D PH+RYY+RE+R
Sbjct: 244 AEILEVLHSLPAVRQYLFSLYECRYSVFFQSLAIVEQEMKKDWLFAPHYRYYVREMRIHA 303
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
YSQ LESY+S+T+ MA+AFGV V+FID ELSRFIAAG+LHCKIDKV ++ETNRPD+KN
Sbjct: 304 YSQLLESYRSLTLGYMAEAFGVGVDFIDQELSRFIAAGRLHCKIDKVNEIVETNRPDSKN 363
Query: 360 ALYQATIKQGDFLLNRIQKLSRVIDL 385
YQ TIK+GD LLNR+QKLSRVI++
Sbjct: 364 WQYQETIKKGDLLLNRVQKLSRVINM 389
>sp|Q9V3G7|PSMD6_DROME 26S proteasome non-ATPase regulatory subunit 6 OS=Drosophila
melanogaster GN=Rpn7 PE=2 SV=1
Length = 389
Score = 407 bits (1046), Expect = e-113, Method: Compositional matrix adjust.
Identities = 192/379 (50%), Positives = 281/379 (74%), Gaps = 2/379 (0%)
Query: 7 QQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVL 66
+ +L LA +FLLT + + + LK ++ ++ +MA +YE + +E +D+ +L
Sbjct: 13 KNPNLELAQTKFLLTLAEYK--QDAALKAKLLEAIRTENMAPWYEHICSELGWTVDKDLL 70
Query: 67 DSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESK 126
M+ E+++LD I DAE+NLGE EVREA+L KS + +IGDK A + T K
Sbjct: 71 ARMKENNRVEVEQLDAAIEDAEKNLGEMEVREANLKKSEYLCRIGDKAAAETAFRKTYEK 130
Query: 127 TVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMS 186
TV++G ++D+VF+ ++LG FY+D DLI+++IDKAK L EEGGDW+R+NRLKVY+G+Y ++
Sbjct: 131 TVSLGHRLDIVFHLIRLGLFYLDHDLITRNIDKAKYLIEEGGDWDRRNRLKVYQGVYSVA 190
Query: 187 TRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVI 246
R+FK AA+ FLD++STFT+YEL Y TF+ YTV ++I+L R L+ KV+ EI V+
Sbjct: 191 VRDFKAAATFFLDTVSTFTSYELMDYPTFVRYTVYVAMIALPRNELRDKVIKGSEIQEVL 250
Query: 247 GKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQFLES 306
+P + +FL SLY+CQY++F+ AG+ +Q++LD ++PH+RYY+RE+R + Y+Q LES
Sbjct: 251 HGLPDVKQFLFSLYNCQYENFYVHLAGVEKQLRLDYLIHPHYRYYVREMRILGYTQLLES 310
Query: 307 YKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATI 366
Y+S+T++ MA++FGVTVE+ID EL+RFIAAG+LH K+D+V G++ETNRPD KN YQATI
Sbjct: 311 YRSLTLQYMAESFGVTVEYIDQELARFIAAGRLHAKVDRVGGIVETNRPDNKNWQYQATI 370
Query: 367 KQGDFLLNRIQKLSRVIDL 385
KQGD LLNRIQKLSRVI++
Sbjct: 371 KQGDLLLNRIQKLSRVINI 389
>sp|Q55C75|PSMD6_DICDI 26S proteasome non-ATPase regulatory subunit 6 OS=Dictyostelium
discoideum GN=psmD6 PE=1 SV=1
Length = 382
Score = 391 bits (1004), Expect = e-108, Method: Compositional matrix adjust.
Identities = 181/345 (52%), Positives = 259/345 (75%)
Query: 41 VKAHDMASFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAH 100
++ H M Y+ LV + DQ ++ ++ + E ELK LD++I D+ EN GESE+REA+
Sbjct: 38 IETHKMLPLYKILVEQLKWTEDQGLVSKLKAENESELKALDNKITDSVENFGESEIREAY 97
Query: 101 LAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKA 160
LAKS FY +IGDK+ A+E + T KTV +GQK+D+VF +++G F+MD D+++++++KA
Sbjct: 98 LAKSDFYCRIGDKDTAVEMYRQTFEKTVPLGQKLDIVFTLIRMGIFWMDHDIVTRNLEKA 157
Query: 161 KSLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTV 220
+SL EEGGDW+RKNRLK YE +Y MS R FK+A+ L+L+++++FT+ E Y FI Y +
Sbjct: 158 QSLVEEGGDWDRKNRLKTYEAVYKMSIRQFKEASDLYLETVASFTSTEFIDYSRFIQYLI 217
Query: 221 LTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKL 280
TS++ LDRVSLKQKV+D+P++L+VI P L + L S Y+ Y +FF A A ++ IK
Sbjct: 218 FTSLLHLDRVSLKQKVIDSPDVLSVINDTPKLQDLLQSFYNGDYANFFGALAHFSDSIKG 277
Query: 281 DRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLH 340
DRYL H R++ RE+R + Y+QFLESY SV +E+M+ FGV+ +FID ELSRF+AAG+L+
Sbjct: 278 DRYLAEHSRFFTREMRILAYNQFLESYSSVKLESMSNQFGVSYDFIDRELSRFVAAGRLN 337
Query: 341 CKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 385
CKIDKV+GV+ET R DAKN LY+ T++QGD LLNR+QKLSRVI++
Sbjct: 338 CKIDKVSGVIETTRSDAKNHLYKTTLQQGDNLLNRVQKLSRVINV 382
>sp|Q20585|PSMD6_CAEEL 26S proteasome non-ATPase regulatory subunit 6 OS=Caenorhabditis
elegans GN=rpn-7 PE=3 SV=1
Length = 410
Score = 348 bits (894), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 182/381 (47%), Positives = 247/381 (64%), Gaps = 7/381 (1%)
Query: 11 LVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVLEMDQSVLDSMR 70
L L+ RF+L HP+V K ++ +K DMA FYE + A+ + +D + L +M+
Sbjct: 29 LELSQTRFMLNHPEVDSSVKEAKLEKLQETIKEFDMAPFYELVCADFKIVVDATQLAAMK 88
Query: 71 TKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAV 130
+ ++ ++ + DAE+NLGESEVR+ L K +Y QIGDK+ AL+ T KTV +
Sbjct: 89 AANQKKIDEITAEVEDAEKNLGESEVRQGLLRKFEYYCQIGDKDNALKAYTATYEKTVGM 148
Query: 131 GQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVYEGLYCMSTRNF 190
G ++D+VF +++G F++D LI+K I KAK L E+GGDWERKNRL+ YE LY MS R+F
Sbjct: 149 GYRIDVVFAMIRVGLFFLDHHLINKFITKAKELMEQGGDWERKNRLRSYEALYRMSVRDF 208
Query: 191 KKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAPEI---LT--- 244
AA LFL+++ TF +YEL Y+ I YTV+T+ +LDR L+ KV+ E+ LT
Sbjct: 209 AGAADLFLEAVPTFGSYELMTYENLILYTVITTTFALDRPDLRTKVIRCNEVQEQLTGGG 268
Query: 245 VIGKIPYLSEFLNSLYDCQYKSFFSAFAGL-TEQIKLDRYLYPHFRYYMREVRTVVYSQF 303
+ G + + E+L S YDC Y FF A L +E+ K DRYL PHF YY R +R Y QF
Sbjct: 269 LNGTLIPVREYLESYYDCHYDRFFIQLAALESERFKFDRYLSPHFNYYSRGMRHRAYEQF 328
Query: 304 LESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQ 363
L YK+V I+ MAK FGV+ FID EL R IA G+L C+ID V GV+E N D+KN LY+
Sbjct: 329 LTPYKTVRIDMMAKDFGVSRAFIDRELHRLIATGQLQCRIDAVNGVIEVNHRDSKNHLYK 388
Query: 364 ATIKQGDFLLNRIQKLSRVID 384
A IK GD LLNRIQKL+RVI+
Sbjct: 389 AVIKDGDILLNRIQKLARVIN 409
>sp|Q10335|RPN7_SCHPO Probable 26S proteasome regulatory subunit rpn7
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=rpn7 PE=2 SV=1
Length = 409
Score = 310 bits (794), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 158/386 (40%), Positives = 242/386 (62%), Gaps = 9/386 (2%)
Query: 1 MDSEGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFY----ETLVAE 56
M + + L ++ F L+ P +++ + L +FS ++ HD+A Y E
Sbjct: 13 MTEKARTVSDLTISQAIFELSSPFLENKSQKAL-DTLFSAIRDHDLAPLYKYLSENPKTS 71
Query: 57 SVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKA 116
+ ++ D + L+SM K E++L + D I DA+E GE E+ EA K+ +Y I D+E+
Sbjct: 72 ASIDFDSNFLNSMIKKNEEKLAEFDKAIEDAQELNGEHEILEAMKNKADYYTNICDRERG 131
Query: 117 LEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRL 176
++ T + G K+D++F ++L + Y D ++ + ++K K L E+GGDWERKNRL
Sbjct: 132 VQLCDETFERATLTGMKIDVLFSKIRLAYVYADMRVVGQLLEKLKPLIEKGGDWERKNRL 191
Query: 177 KVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKV 236
K Y+G+Y MS RNF AA L LD +STF++ EL PY + Y V++ ISLDRV +K K+
Sbjct: 192 KAYQGIYLMSIRNFSGAADLLLDCMSTFSSTELLPYYDVVRYAVISGAISLDRVDVKTKI 251
Query: 237 VDAPEILTVIGKIPYLSEF---LNSLYDCQYKSFFSAFAGL-TEQIKLDRYLYPHFRYYM 292
VD+PE+L V+ + +S +NSLY C Y FF A + +K D++L H+RYY+
Sbjct: 252 VDSPEVLAVLPQNESMSSLEACINSLYLCDYSGFFRTLADVEVNHLKCDQFLVAHYRYYV 311
Query: 293 REVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLET 352
RE+R Y+Q LESY++++I++MA +FGV+V++ID +L+ FI KL+C ID+V GV+ T
Sbjct: 312 REMRRRAYAQLLESYRALSIDSMAASFGVSVDYIDRDLASFIPDNKLNCVIDRVNGVVFT 371
Query: 353 NRPDAKNALYQATIKQGDFLLNRIQK 378
NRPD KN YQ +KQGD LLN++QK
Sbjct: 372 NRPDEKNRQYQEVVKQGDVLLNKLQK 397
>sp|Q06103|RPN7_YEAST 26S proteasome regulatory subunit RPN7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=RPN7 PE=1 SV=3
Length = 429
Score = 259 bits (661), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 149/411 (36%), Positives = 234/411 (56%), Gaps = 51/411 (12%)
Query: 13 LAHKRFLLTHPDVQDIEKVGLKGE-VFSMVKAHDMASFYETLVAESV------------- 58
++ K FLLT V IE+ E V + +K +MA +Y+ L E +
Sbjct: 26 VSEKAFLLTQSKVS-IEQRKEAAEFVLAKIKEEEMAPYYKYLCEEYLVNNGQSDLEHDEK 84
Query: 59 -------LEMDQSVLDSMRTKIEDELKKLDDRI-------------ADAEENLGESEVRE 98
++ DQ + + + K E ++K+L+++I A A NLGE
Sbjct: 85 SDSLNEWIKFDQELYNELCKKNESKIKELNEKIQKLEEDDEGELEQAQAWINLGE----- 139
Query: 99 AHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSID 158
+Y QIGDK+ A + L + SK ++ G K+D++ +LGFFY D + + ++
Sbjct: 140 -------YYAQIGDKDNAEKTLGKSLSKAISTGAKIDVMLTIARLGFFYNDQLYVKEKLE 192
Query: 159 KAKSLFEEGGDWERKNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFY 218
S+ E+GGDWER+NR K Y G++C++ RNFK+AA L +DS++TFT+ EL Y++ Y
Sbjct: 193 AVNSMIEKGGDWERRNRYKTYYGIHCLAVRNFKEAAKLLVDSLATFTSIELTSYESIATY 252
Query: 219 TVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYL---SEFLNSLYDCQYKSFFSAFAGLT 275
+T + +L+R LK KV+D+PE+L++I L S SLY Y S+F
Sbjct: 253 ASVTGLFTLERTDLKSKVIDSPELLSLISTTAALQSISSLTISLYASDYASYFPYLLETY 312
Query: 276 EQIKLD-RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFI 334
+ + +YL H +++RE+R VY+Q LESYK++++++MA AFGV+V F+D +L +FI
Sbjct: 313 ANVLIPCKYLNRHADFFVREMRRKVYAQLLESYKTLSLKSMASAFGVSVAFLDNDLGKFI 372
Query: 335 AAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVIDL 385
+L+C ID+V G++ETNRPD KNA Y +KQGD LL ++QK + L
Sbjct: 373 PNKQLNCVIDRVNGIVETNRPDNKNAQYHLLVKQGDGLLTKLQKYGAAVRL 423
>sp|Q54QX3|CSN1_DICDI COP9 signalosome complex subunit 1 OS=Dictyostelium discoideum
GN=csn1 PE=1 SV=1
Length = 458
Score = 115 bits (288), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/369 (25%), Positives = 169/369 (45%), Gaps = 33/369 (8%)
Query: 41 VKAHDMA----------SFYETLVAES--VLEMDQSVLDSMRTKIEDELKKLDDRIADAE 88
V+A++MA Y T++ +S +LE+D ++++ K +L KL+ + A+
Sbjct: 60 VEAYNMALKEVQKTPNLELYNTIINKSHGILELDPVYIENLSKKNSLQLDKLEQDLNTAK 119
Query: 89 ENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYM 148
N+ + +R A FY +IGD + AL+ T + + F ++LG
Sbjct: 120 SNMVKDSIRFAQNDLGEFYYKIGDHQNALKCFIRTRDYCTTSKHVLAMCFNIIKLGVDTQ 179
Query: 149 DFDLISKSIDKAKSLFEEGGDWER--KNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTT 206
++ I KA E+ D + +L+ GLY + +K AA F+++ F
Sbjct: 180 NYTHAPSYIAKA----EQSPDLDNVSNAKLRSVNGLYNLDGSRYKLAARKFIET--PFEQ 233
Query: 207 YELF-----PYDTFIFYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYD 261
+F P D +Y L ++ + DR LK+KV+D P + +P L E +N Y+
Sbjct: 234 SNVFSDIISPQD-IAYYGGLCALATFDRNELKKKVIDDPMFKNYLELVPELRELINDFYN 292
Query: 262 CQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGV 321
+Y S + + LD +LY H + +R+ Q+ Y+SV + MA AF
Sbjct: 293 TKYGSCLKYLDKMKPILLLDIHLYKHVEILYQRIRSKALVQYFSPYQSVDMNIMASAFNT 352
Query: 322 TVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQG-DF------LLN 374
TV ++ E+S+ I ++ +ID L + D + ++ T++ G DF LL
Sbjct: 353 TVTLLEKEISKLIMENEIQARIDSHNKRLYARKADQRTTTFEKTVQVGSDFQNSSNSLLL 412
Query: 375 RIQKLSRVI 383
R++ L+ I
Sbjct: 413 RLEMLNNNI 421
>sp|Q6NRT5|CSN1_XENLA COP9 signalosome complex subunit 1 OS=Xenopus laevis GN=csn1 PE=2
SV=1
Length = 487
Score = 85.5 bits (210), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 149/330 (45%), Gaps = 16/330 (4%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
V E +E +D S +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 112 VPEGSMEPPALDTSWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 171
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 172 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 231
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY---ELFPYDTFIFYT 219
G+ + + +LK GL ++ R +K+AA FL +++F EL Y
Sbjct: 232 GERDSQTQAVLTKLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYG 289
Query: 220 VLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIK 279
L ++ + DR L++ V+ + + P + + + Y+ +Y S + + +
Sbjct: 290 GLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEIKDNLL 349
Query: 280 LDRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKL 339
LD YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G +
Sbjct: 350 LDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMYKMATAFNTTVSALEDELTQLILEGLI 409
Query: 340 HCKIDKVAGVLETNRPDAKNALYQATIKQG 369
+ +ID + +L D ++ ++ +++ G
Sbjct: 410 NARIDSHSKILYARDVDQRSTTFEKSLQMG 439
>sp|Q99LD4|CSN1_MOUSE COP9 signalosome complex subunit 1 OS=Mus musculus GN=Gps1 PE=1
SV=1
Length = 471
Score = 84.0 bits (206), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 149/330 (45%), Gaps = 16/330 (4%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 96 IPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 155
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 156 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 215
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY---ELFPYDTFIFYT 219
G+ + + +LK GL ++ R +K+AA FL +++F EL Y
Sbjct: 216 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYG 273
Query: 220 VLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIK 279
L ++ + DR L++ V+ + + P + + + Y+ +Y S + + +
Sbjct: 274 GLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLL 333
Query: 280 LDRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKL 339
LD YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G +
Sbjct: 334 LDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQLILEGLI 393
Query: 340 HCKIDKVAGVLETNRPDAKNALYQATIKQG 369
+ +ID + +L D ++ ++ ++ G
Sbjct: 394 NARIDSHSKILYARDVDQRSTTFEKSLLMG 423
>sp|P97834|CSN1_RAT COP9 signalosome complex subunit 1 OS=Rattus norvegicus GN=Gps1
PE=1 SV=1
Length = 471
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 149/330 (45%), Gaps = 16/330 (4%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 96 IPESGVEPPPLDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 155
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 156 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 215
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAASLFLDSISTFTTY---ELFPYDTFIFYT 219
G+ + + +LK GL ++ R +K+AA FL +++F EL Y
Sbjct: 216 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCFL--LASFDHCDFPELLSPSNVAVYG 273
Query: 220 VLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIK 279
L ++ + DR L++ V+ + + P + + + Y+ +Y S + + +
Sbjct: 274 GLCALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLL 333
Query: 280 LDRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKL 339
LD YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G +
Sbjct: 334 LDMYLAPHVRTLYTQIRNRALIQYFSPYVSADMHKMAAAFNTTVAALEDELTQVILEGLI 393
Query: 340 HCKIDKVAGVLETNRPDAKNALYQATIKQG 369
+ +ID + +L D ++ ++ ++ G
Sbjct: 394 NARIDSHSKILYARDVDQRSTTFEKSLLMG 423
>sp|P45432|CSN1_ARATH COP9 signalosome complex subunit 1 OS=Arabidopsis thaliana GN=CSN1
PE=1 SV=2
Length = 441
Score = 83.6 bits (205), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/317 (23%), Positives = 141/317 (44%), Gaps = 13/317 (4%)
Query: 61 MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYI---QIGDKEKAL 117
MD + +++ + E + KL++ ++ NL + +R + FY +GD K
Sbjct: 103 MDLAWCEAVDRRAEQKKVKLENELSSYRTNLIKESIRMGYNDFGDFYYACGMLGDAFKNY 162
Query: 118 EQLK--VTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNR 175
+ + T +K + + M+ + ++++G F ++K+ ++L + +
Sbjct: 163 IRTRDYCTTTKHI-IHMCMNAILVSIEMGQFTHVTSYVNKAEQNPETL-----EPMVNAK 216
Query: 176 LKVYEGLYCMSTRNFKKAASLFLD-SISTFTTY-ELFPYDTFIFYTVLTSIISLDRVSLK 233
L+ GL + + +K AA FLD + +Y E+ Y L ++ S DR LK
Sbjct: 217 LRCASGLAHLELKKYKLAARKFLDVNPELGNSYNEVIAPQDIATYGGLCALASFDRSELK 276
Query: 234 QKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMR 293
QKV+D + +P + E +N Y +Y S A L + LD +L+ H
Sbjct: 277 QKVIDNINFRNFLELVPDVRELINDFYSSRYASCLEYLASLKSNLLLDIHLHDHVDTLYD 336
Query: 294 EVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETN 353
++R Q+ + SV + MA AF +V ++ EL I ++ +ID +L
Sbjct: 337 QIRKKALIQYTLPFVSVDLSRMADAFKTSVSGLEKELEALITDNQIQARIDSHNKILYAR 396
Query: 354 RPDAKNALYQATIKQGD 370
D +NA +Q ++ G+
Sbjct: 397 HADQRNATFQKVLQMGN 413
>sp|Q13098|CSN1_HUMAN COP9 signalosome complex subunit 1 OS=Homo sapiens GN=GPS1 PE=1
SV=4
Length = 491
Score = 82.4 bits (202), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 145/328 (44%), Gaps = 12/328 (3%)
Query: 54 VAESVLE---MDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
+ ES +E +D + +++ R K +L+KLD + + + N + +R H Y+
Sbjct: 116 IPESGVEPPALDTAWVEATRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDC 175
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKS---LFEEG 167
GD AL+ + +++ +++ + ++ + + KA+S + E+
Sbjct: 176 GDLSNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQR 235
Query: 168 GDWERKN-----RLKVYEGLYCMSTRNFKKAA-SLFLDSISTFTTYELFPYDTFIFYTVL 221
G+ + + +LK GL ++ R +K+AA L L S EL Y L
Sbjct: 236 GERDSQTQAILTKLKCAAGLAELAARKYKQAAKCLLLASFDHCDFPELLSPSNVAIYGGL 295
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ + DR L++ V+ + + P + + + Y+ +Y S + + + LD
Sbjct: 296 CALATFDRQELQRNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLD 355
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL PH R ++R Q+ Y S + MA AF TV ++ EL++ I G +
Sbjct: 356 MYLAPHVRTLYTQIRNRALIQYFSPYVSADMHRMAAAFNTTVAALEDELTQLILEGLISA 415
Query: 342 KIDKVAGVLETNRPDAKNALYQATIKQG 369
++D + +L D ++ ++ ++ G
Sbjct: 416 RVDSHSKILYARDVDQRSTTFEKSLLMG 443
>sp|Q9VVU5|CSN1_DROME COP9 signalosome complex subunit 1b OS=Drosophila melanogaster
GN=CSN1b PE=2 SV=1
Length = 525
Score = 81.6 bits (200), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/314 (21%), Positives = 136/314 (43%), Gaps = 6/314 (1%)
Query: 62 DQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLK 121
D + +D+ K +L+KLD + + + N + +R H + Y+ GD AL+
Sbjct: 159 DAAWVDTKMKKAALKLEKLDSDLKNYKSNSIKESIRRGHDDLADHYLSCGDLTNALKCYS 218
Query: 122 VTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSL--FEEG---GDWERKNRL 176
+ +++ +++ + ++ + I KA+S F EG + + RL
Sbjct: 219 RARDYCTSGKHVVNMCLNVIKVSIYLQNWAHVMSYISKAESTPDFAEGSKEANAQVHTRL 278
Query: 177 KVYEGLYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVLTSIISLDRVSLKQK 235
+ GL + + +K AA FL++ + E+ Y L ++ + DR LK+
Sbjct: 279 ECAAGLAELQQKKYKVAAKHFLNANFDHCDFPEMISTSNVAVYGGLCALATFDRQELKRL 338
Query: 236 VVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREV 295
V+ + + P L + + Y+ +Y S + + + + +D Y+ PH ++
Sbjct: 339 VIASTSFKLFLELEPQLRDIIFKFYESKYASCLTLLDEIRDNLLVDMYIAPHVTTLYTKI 398
Query: 296 RTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRP 355
R Q+ Y S + MA AF +V ++ E+ + I G++ +ID +L
Sbjct: 399 RNRALIQYFSPYMSADMHKMAMAFNSSVGDLENEVMQLILDGQIQARIDSHNKILFAKEA 458
Query: 356 DAKNALYQATIKQG 369
D +N+ ++ + G
Sbjct: 459 DQRNSTFERALIMG 472
>sp|Q7RXQ1|CSN1_NEUCR COP9 signalosome complex subunit 1 OS=Neurospora crassa (strain
ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC
987) GN=csn-1 PE=1 SV=1
Length = 425
Score = 65.9 bits (159), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/305 (20%), Positives = 128/305 (41%), Gaps = 8/305 (2%)
Query: 48 SFYETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFY 107
S ++ E +D++ ++S + D L + + NL + +R + +
Sbjct: 66 SLFQAAPNEPEALLDKAWMESKEKENRDTTAHLQAELQGYKNNLIKESIRMGNEDLGKHF 125
Query: 108 IQIGDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEG 167
IGD E A++ ++ + Q +DL +++ D+ I + S+ +
Sbjct: 126 EAIGDVEAAMDSFWKMRTEVSSTEQLVDLGKLLVRVAIERRDWKSIGNHLKPLNSVNDSD 185
Query: 168 GDWER-KNRLKVYEGLYCMSTRNFKKAASLFLDSISTFTTYELF-----PYDTFIFYTVL 221
+ K K+ G+ + +K+AA F+++ S+ E++ P D I Y L
Sbjct: 186 PKAKALKTYSKIANGIAALGQERYKEAAFCFVEA-SSGVPPEIYNQIASPNDVAI-YGGL 243
Query: 222 TSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLD 281
++ ++DR L+ ++D + + P++ + + +Y + LD
Sbjct: 244 LALATMDRHELQANLLDNDSFREFLQREPHIRRAITQFVNGRYAACIEILESYRPDYLLD 303
Query: 282 RYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHC 341
YL H ++RT Q+L+ + V ++ M KAF I+ EL I GKL+
Sbjct: 304 IYLQKHVPKLYADIRTKSIVQYLKPFSCVRLDTMQKAFNGPGPSIEDELFTMIKDGKLNA 363
Query: 342 KIDKV 346
+ID +
Sbjct: 364 RIDAI 368
>sp|Q6K1U0|P2C17_ORYSJ Probable protein phosphatase 2C 17 OS=Oryza sativa subsp. japonica
GN=Os02g0599150 PE=2 SV=1
Length = 735
Score = 53.5 bits (127), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 4 EGTQQAHLVLAHKRFLLTHPDVQDIEKVGLKGEVFSMVKAHDMASFYETLVAESVL 59
E Q+ HLVLAH+ FLL+ PD+ D+ V L+ + VK+ MA +E+L VL
Sbjct: 655 EAKQERHLVLAHELFLLSRPDLDDLANVALRSDALDAVKSDGMAPLFESLATAGVL 710
>sp|Q5BD89|CSN1_EMENI COP9 signalosome complex subunit 1 OS=Emericella nidulans (strain
FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139)
GN=csnA PE=1 SV=2
Length = 498
Score = 50.8 bits (120), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/275 (18%), Positives = 113/275 (41%), Gaps = 16/275 (5%)
Query: 51 ETLVAESVLEMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQI 110
E + +E Q V+ + ++E EL+ + + +G E+ + Y +I
Sbjct: 117 EATIDSDWVERSQKVVKAETDRLEHELRGYKNNLIKESIRMGNEELGQ-------HYHRI 169
Query: 111 GDKEKALEQLKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDW 170
GD A + ++F + + D+ + ++ + +S +GG
Sbjct: 170 GDLTSAFKAYSRMRDFCTTPSHIASMLFKIINVAIERGDWLNVQSNVHRLRS---QGGKP 226
Query: 171 E----RKNRLKVYEGLYCMSTRNFKKAASLFLDSISTF--TTYELFPYDTFIFYTVLTSI 224
E + ++ GL + + ++ +AA+ F+ + + T E+ + Y L ++
Sbjct: 227 EEQAKHQPKISAAMGLSQLHSGSYLEAANSFIATDPSLGDTFNEVLTSNDVAVYGGLCAL 286
Query: 225 ISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYL 284
S+DR L+++V+D + P++ ++ + +++ LD +L
Sbjct: 287 ASMDRNELQRRVLDNSSFRNFLELEPHIRRAISFFCNSKFRPCLEILEAYRADYLLDIHL 346
Query: 285 YPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAF 319
H + +RT Q+L + V++E+MAK F
Sbjct: 347 QRHVQVLYNRIRTKSIQQYLIPFNRVSLESMAKIF 381
>sp|Q9GS00|CSN1_CAEEL COP9 signalosome complex subunit 1 OS=Caenorhabditis elegans
GN=csn-1 PE=1 SV=1
Length = 601
Score = 45.8 bits (107), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/134 (20%), Positives = 61/134 (45%)
Query: 217 FYTVLTSIISLDRVSLKQKVVDAPEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTE 276
Y +L+++ ++ R LK +V ++ P L E L S ++ F +
Sbjct: 360 IYGMLSAMATMSRADLKLQVSGNGTFRKLLESEPQLIELLGSYTSSRFGRCFEIMRSVKP 419
Query: 277 QIKLDRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAA 336
++ LD ++ + ++R Q+L+ Y ++ + MA+A G++ + + L I
Sbjct: 420 RLLLDPFISRNVDELFEKIRQKCVLQYLQPYSTIKMATMAEAVGMSSAELQLSLLELIEQ 479
Query: 337 GKLHCKIDKVAGVL 350
+ KID+ G++
Sbjct: 480 KHVSLKIDQNEGIV 493
>sp|O94308|CSN1_SCHPO COP9 signalosome complex subunit 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn1 PE=1 SV=1
Length = 422
Score = 44.7 bits (104), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/287 (19%), Positives = 109/287 (37%), Gaps = 3/287 (1%)
Query: 60 EMDQSVLDSMRTKIEDELKKLDDRIADAEENLGESEVREAHLAKSLFYIQIGDKEKALEQ 119
++D ++S+ + L++L + + NL +R A L + F+ +G + AL
Sbjct: 75 QLDVEWVESVTFHRKQNLEQLRRELKAYKNNLIRESIRAAQLDLASFFADVGQFDSALRS 134
Query: 120 LKVTESKTVAVGQKMDLVFYTLQLGFFYMDFDLISKSIDKAKSLFEEGGDWERKNRLKVY 179
GQ L +++ + ++ + +AKS E + + Y
Sbjct: 135 YAKVREYCTNAGQIAHLSLELMRISIWIGNYSHVLAFGSRAKSTV--SAAMELTSPIYAY 192
Query: 180 EGLYCMSTRNFKKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVDA 239
GL ++++A + FL + T T+ + Y L ++ D L Q++
Sbjct: 193 CGLANFCLGDYEEALAHFL-KVETDTSDGIITKTDISVYISLCALACWDHKRLIQELERN 251
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
E + P L L + + +Y + LD YL P +R
Sbjct: 252 EEFNALSDLDPSLRRCLQAKCNRKYSLLLDTLQQNAQDYSLDMYLAPQLTNLFSLIRERS 311
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKV 346
+L Y ++ +A F + FI+ L I A KL+ K+D +
Sbjct: 312 LLDYLIPYSALPFSKIAVDFHIDENFIEKNLLEIIEAKKLNGKVDSL 358
>sp|Q94899|CSN2_DROME COP9 signalosome complex subunit 2 OS=Drosophila melanogaster
GN=alien PE=1 SV=2
Length = 444
Score = 43.1 bits (100), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 61/140 (43%), Gaps = 11/140 (7%)
Query: 240 PEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVV 299
PEIL ++ +NS + F + I D+++ H +R +RT V
Sbjct: 307 PEILA-------MTNLVNSYQNNDINEFETILRQHRSNIMADQFIREHIEDLLRNIRTQV 359
Query: 300 YSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKN 359
+ + YK++ I +A A + ++ L I + +ID+V VL+ ++ ++
Sbjct: 360 LIKLIRPYKNIAIPFIANALNIEPAEVESLLVSCILDDTIKGRIDQVNQVLQLDKINSSA 419
Query: 360 ALYQATIKQGDFLLNRIQKL 379
+ Y A K N+IQ L
Sbjct: 420 SRYNALEKWS----NQIQSL 435
>sp|Q20938|PS11A_CAEEL Probable 26S proteasome regulatory subunit rpn-6.1
OS=Caenorhabditis elegans GN=rpn-6.1 PE=2 SV=2
Length = 438
Score = 38.1 bits (87), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 41/86 (47%)
Query: 265 KSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVE 324
K F AF +++++D + HF + + +E Y V IE +A+ G+
Sbjct: 316 KDFQVAFGSFPQELQMDPVVRKHFHSLSERMLEKDLCRIIEPYSFVQIEHVAQQIGIDRS 375
Query: 325 FIDVELSRFIAAGKLHCKIDKVAGVL 350
++ +LS+ I KL +D+ G+L
Sbjct: 376 KVEKKLSQMILDQKLSGSLDQGEGML 401
>sp|Q9HFR0|CSN2_SCHPO COP9 signalosome complex subunit 2 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=csn2 PE=1 SV=1
Length = 437
Score = 37.4 bits (85), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/84 (27%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 295 VRTVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNR 354
+R+ V + ++ Y SV + +AK GV++ I+ L I +++ KID V V ++
Sbjct: 356 IRSQVLIELVKPYTSVKLSLLAKKLGVSISIIEQALVGLIIDERVNGKIDMVNEVFTISQ 415
Query: 355 PDAKNALYQATIKQGDFLLNRIQK 378
P KN ++ ++ L N K
Sbjct: 416 P--KNTIHNQLVEDVQKLWNTATK 437
>sp|Q9D8W5|PSD12_MOUSE 26S proteasome non-ATPase regulatory subunit 12 OS=Mus musculus
GN=Psmd12 PE=1 SV=4
Length = 456
Score = 37.0 bits (84), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 41/77 (53%)
Query: 307 YKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATI 366
Y +T++ MA+ ++V+ + LS + + K+D++AGV+ RP N L
Sbjct: 370 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGVINFQRPKDPNNLLNDWS 429
Query: 367 KQGDFLLNRIQKLSRVI 383
++ + L++ + K + +I
Sbjct: 430 QKLNSLMSLVNKTTHLI 446
>sp|Q2KJ25|PSD12_BOVIN 26S proteasome non-ATPase regulatory subunit 12 OS=Bos taurus
GN=PSMD12 PE=2 SV=3
Length = 456
Score = 36.6 bits (83), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 307 YKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATI 366
Y +T++ MA+ ++V+ + LS + + K+D++AG++ RP N L
Sbjct: 370 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 429
Query: 367 KQGDFLLNRIQKLSRVI 383
++ + L++ + K + +I
Sbjct: 430 QKLNSLMSLVNKTTHLI 446
>sp|Q5RBI3|PSD12_PONAB 26S proteasome non-ATPase regulatory subunit 12 OS=Pongo abelii
GN=PSMD12 PE=2 SV=3
Length = 456
Score = 36.6 bits (83), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 307 YKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATI 366
Y +T++ MA+ ++V+ + LS + + K+D++AG++ RP N L
Sbjct: 370 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 429
Query: 367 KQGDFLLNRIQKLSRVI 383
++ + L++ + K + +I
Sbjct: 430 QKLNSLMSLVNKTTHLI 446
>sp|O00232|PSD12_HUMAN 26S proteasome non-ATPase regulatory subunit 12 OS=Homo sapiens
GN=PSMD12 PE=1 SV=3
Length = 456
Score = 36.2 bits (82), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/77 (23%), Positives = 41/77 (53%)
Query: 307 YKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATI 366
Y +T++ MA+ ++V+ + LS + + K+D++AG++ RP N L
Sbjct: 370 YTRITMKRMAQLLDLSVDESEAFLSNLVVNKTIFAKVDRLAGIINFQRPKDPNNLLNDWS 429
Query: 367 KQGDFLLNRIQKLSRVI 383
++ + L++ + K + +I
Sbjct: 430 QKLNSLMSLVNKTTHLI 446
>sp|P40512|CSN11_YEAST Cop9 signalosome complex subunit 11 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=PCI8 PE=1 SV=1
Length = 444
Score = 35.4 bits (80), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 68/168 (40%), Gaps = 27/168 (16%)
Query: 180 EGLYCMSTRNF-KKAASLFLDSISTFTTYELFPYDTFIFYTVLTSIISLDRVSLKQKVVD 238
E L CM NF K + + +IS + L YD FI+ + L +
Sbjct: 211 EHLDCM---NFISKEEFIMMVNISVLISIPLDNYDDFIYLSDLKQFFQM----------- 256
Query: 239 APEILTVIGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDR-YLYPHFRYYMREV-R 296
P L L L + + FF + G +I ++ +L P + + R
Sbjct: 257 ----------TPLLVNCLELLINTNFNKFFKIWHGEINKICMESLFLEPSWSSSAAVIMR 306
Query: 297 TVVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKID 344
+Y +L K + ++ G+ +E I EL++ I +G+L+ +ID
Sbjct: 307 CKIYFFYLRISKKLQFSYLSSTLGIDLEDIKEELTKLIISGQLNFEID 354
>sp|O14164|EIF3C_SCHPO Eukaryotic translation initiation factor 3 subunit C
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=nip1 PE=1 SV=2
Length = 918
Score = 33.9 bits (76), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 3/53 (5%)
Query: 298 VVYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVAGVL 350
+ Y+ F Y SV++E +A F + V+ + V +SR ++ ++H +D+V G +
Sbjct: 800 LAYAAF---YDSVSLEFLATTFDLPVQRVTVIVSRLLSKREIHAALDQVHGAI 849
>sp|P34481|PS11B_CAEEL Probable 26S proteasome regulatory subunit rpn-6.2
OS=Caenorhabditis elegans GN=rpn-6.2 PE=3 SV=3
Length = 416
Score = 32.7 bits (73), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 90/208 (43%), Gaps = 13/208 (6%)
Query: 182 LYCMSTRNFKKAASLFLDSISTFTTY-ELFPYDTFIFYTVLTSIISLDRVSLKQKVVDAP 240
LY R++K + S F ++ F + + + + Y +L I+ L+ ++ A
Sbjct: 209 LYSAEERDYKTSFSYFYEAFEGFASIGDKINATSALKYMILCKIM-LNETEQLAGLLAAK 267
Query: 241 EILTV--IGKIPYLSEFLNSLYDCQYKSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTV 298
EI+ +I + ++ K F A A ++ D+ + H + R +
Sbjct: 268 EIVAYQKSPRIIAIRSMADAFRKRSLKDFVKALAEHKIELVEDKVVAVHSQNLERNMLEK 327
Query: 299 VYSQFLESYKSVTIEAMAKAFGVTVEFIDVELSRFIAAGKLHCKIDKVA-GVLETNRPDA 357
S+ +E Y + + +A+ G+TV ++ ++R I KL ID+ V+ + DA
Sbjct: 328 EISRVIEPYSEIELSYIARVIGMTVPPVERAIARMILDKKLMGSIDQHGDTVVVYPKADA 387
Query: 358 KNALYQATIKQGDFLLNRIQKLSRVIDL 385
N ++ L I++L++ +D+
Sbjct: 388 ANQFTRS--------LKTIRELTKTVDV 407
>sp|Q9LP45|PSD11_ARATH 26S proteasome non-ATPase regulatory subunit 11 OS=Arabidopsis
thaliana GN=RPN6A PE=1 SV=1
Length = 419
Score = 32.3 bits (72), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 27/120 (22%), Positives = 52/120 (43%), Gaps = 7/120 (5%)
Query: 265 KSFFSAFAGLTEQIKLDRYLYPHFRYYMREVRTVVYSQFLESYKSVTIEAMAKAFGVTVE 324
K F +A Q++ D ++ H + + +E + V I +A+ G+ ++
Sbjct: 296 KLFENALRDYKAQLEDDPIVHRHLSSLYDTLLEQNLCRLIEPFSRVEIAHIAELIGLPLD 355
Query: 325 FIDVELSRFIAAGKLHCKIDKVAGVLETNRPDAKNALYQATIKQGDFLLNRIQKLSRVID 384
++ +LS+ I K +D+ AG L +A+Y AT L I + +V+D
Sbjct: 356 HVEKKLSQMILDKKFAGTLDQGAGCLIIFEDPKADAIYSAT-------LETIANMGKVVD 408
>sp|Q9QBU0|RDRP_PMTVS Replicase large subunit OS=Potato mop-top virus (isolate
Potato/Sweden/Sw) GN=rep PE=3 SV=3
Length = 1812
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 12/86 (13%)
Query: 91 LGESEVREAHLAKSLFYIQIGDKEKALEQLKVTESKTVAVGQ----KMDLVFYTLQLGFF 146
LG +++ + L +F IGD K+ + +V E+ VAV + + D++F L L +
Sbjct: 1726 LGRKDIKNSDLLSEIF-TSIGDNYKSYDDYRVLEALNVAVMERYKLRCDVMFGLLALKKY 1784
Query: 147 YMDFDLISKSIDKAKSLFEEGGDWER 172
FDL + SLF G ++R
Sbjct: 1785 INSFDLFA-------SLFSHKGRYQR 1803
>sp|Q2YTA7|SYT_STAAB Threonine--tRNA ligase OS=Staphylococcus aureus (strain bovine
RF122 / ET3-1) GN=thrS PE=3 SV=1
Length = 645
Score = 31.6 bits (70), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 72 KIEDELKKLDDRIA--DAEENLGESEVREAHLAKSLFYIQIGDKEKALEQLKVTE 124
+++DELK R++ D E +G ++REA + K+ + I +GDKE Q+ V +
Sbjct: 564 QLQDELKSQGVRVSIDDRNEKMG-YKIREAQMQKTPYQIVVGDKEVENNQVNVRQ 617
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.379
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,421,659
Number of Sequences: 539616
Number of extensions: 4922391
Number of successful extensions: 17034
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 79
Number of HSP's that attempted gapping in prelim test: 16918
Number of HSP's gapped (non-prelim): 179
length of query: 385
length of database: 191,569,459
effective HSP length: 119
effective length of query: 266
effective length of database: 127,355,155
effective search space: 33876471230
effective search space used: 33876471230
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 62 (28.5 bits)