Your job contains 1 sequence.
>016657
MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKPSRKIEKSPVEVNAAEEKKTL
SPSSKAATPPASKLSPKSHSLSVPSILRRHEQLLQSNLSLNASCSSDASTDSFHSRASIG
RLTRSNSVGIRRKPFPSKPRSVVSDGGLDSPPPDGSQTKKRCAWVTPNTDPCYAAFHDEE
WGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFVGFDPIAVSKLNEKKLLAAG
SAASSLLSELKLRAIIENARQISKVIDEFGSFNNYIWSFVSHKPIVSRFRYPRQVPVKTP
KADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSCFRFQECINAAEVKEENGIPDN
DENKKTDGTISQLSMAIDALSLSSE
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 016657
(385 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2174373 - symbol:AT5G57970 species:3702 "Arabi... 1028 8.6e-104 1
TAIR|locus:2025697 - symbol:AT1G80850 species:3702 "Arabi... 676 4.7e-74 2
TAIR|locus:2200447 - symbol:AT1G15970 species:3702 "Arabi... 730 3.2e-72 1
TAIR|locus:2037268 - symbol:AT1G75090 species:3702 "Arabi... 604 1.6e-61 2
TAIR|locus:1006230719 - symbol:AT1G13635 species:3702 "Ar... 536 1.2e-51 1
TAIR|locus:2156329 - symbol:AT5G44680 species:3702 "Arabi... 501 1.1e-50 2
TAIR|locus:2087710 - symbol:AT3G12710 species:3702 "Arabi... 487 1.8e-46 1
TIGR_CMR|GSU_0567 - symbol:GSU_0567 "DNA-3-methyladenine ... 423 1.1e-39 1
TIGR_CMR|CBU_0383 - symbol:CBU_0383 "DNA-3-methyladenine ... 422 1.4e-39 1
TIGR_CMR|CPS_2351 - symbol:CPS_2351 "DNA-3-methyladenine ... 369 5.8e-34 1
UNIPROTKB|P05100 - symbol:tag "3-methyl-adenine DNA glyco... 363 2.5e-33 1
UNIPROTKB|Q0C3V6 - symbol:tag "DNA-3-methyladenine glycos... 343 3.3e-31 1
TIGR_CMR|SO_0016 - symbol:SO_0016 "DNA-3-methyladenine gl... 340 6.9e-31 1
UNIPROTKB|Q9KRH0 - symbol:VC1672 "DNA-3-methyladenine gly... 325 2.7e-29 1
TIGR_CMR|VC_1672 - symbol:VC_1672 "DNA-3-methyladenine gl... 325 2.7e-29 1
TIGR_CMR|SPO_1900 - symbol:SPO_1900 "DNA-3-methyladenine ... 317 1.9e-28 1
DICTYBASE|DDB_G0271050 - symbol:magA "methyladenine glyco... 266 4.8e-23 1
>TAIR|locus:2174373 [details] [associations]
symbol:AT5G57970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688
GenomeReviews:BA000015_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB013396
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT003075 EMBL:AK227342
IPI:IPI00522860 RefSeq:NP_001032091.1 RefSeq:NP_200605.1
UniGene:At.29303 UniGene:At.66976 ProteinModelPortal:Q9FJL9
SMR:Q9FJL9 PaxDb:Q9FJL9 PRIDE:Q9FJL9 EnsemblPlants:AT5G57970.1
EnsemblPlants:AT5G57970.2 GeneID:835908 KEGG:ath:AT5G57970
TAIR:At5g57970 InParanoid:Q9FJL9 OMA:VSMLERE PhylomeDB:Q9FJL9
ProtClustDB:CLSN2716844 Genevestigator:Q9FJL9 Uniprot:Q9FJL9
Length = 347
Score = 1028 (366.9 bits), Expect = 8.6e-104, P = 8.6e-104
Identities = 205/346 (59%), Positives = 232/346 (67%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKPSRKIEKSPVEVNAAEEKKXX 60
MSGA RV+SMNVAE+ETR LG K K SK RK+E+S ++EK
Sbjct: 1 MSGAPRVQSMNVAEAETRSTLGSTAKKASPFITHKAVSKSLRKLERSSSGRTGSDEK--- 57
Query: 61 XXXXXXXXXXXXXXXXXXHSLSVPSILRRHEXXXXXXXXXXXXXXXXXXTDSFHSRASIG 120
H+L+ SILRRHE DSFHSRAS G
Sbjct: 58 --TSYATPTETVSSSSQKHTLNAASILRRHEQNLNSNLSLNASFSSDASMDSFHSRASTG 115
Query: 121 RLTRSNSVGIRRKPFPSKPRSVVSDGGLDSPPPDGSQTKKRCAWVTPNTDPCYAAFHDEE 180
RL RS SVG R K +PSKPRSVVS+G LDSPP +GS+TKKRC WVTPN+DPCY FHDEE
Sbjct: 116 RLIRSYSVGSRSKSYPSKPRSVVSEGALDSPP-NGSETKKRCTWVTPNSDPCYIVFHDEE 174
Query: 181 WGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFVGFDPIAVSKLNXXXXXXXX 240
WGVPVHDDK+LFELLVLSGAL+E TWP ILSKR FREVF FDP A+ K+N
Sbjct: 175 WGVPVHDDKRLFELLVLSGALAEHTWPTILSKRQAFREVFADFDPNAIVKINEKKIIGPG 234
Query: 241 XXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSFVSHKPIVSRFRYPRQVPVKTP 300
RA+IENARQI KVI+E+GSF+ YIWSFV +K IVS+FRY RQVP KTP
Sbjct: 235 SPASTLLSDLKLRAVIENARQILKVIEEYGSFDKYIWSFVKNKAIVSKFRYQRQVPAKTP 294
Query: 301 KADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSCFRFQECI 346
KA+VISKDLVRRGFRSVGPT++YSFMQ AG+TNDHLTSCFRF CI
Sbjct: 295 KAEVISKDLVRRGFRSVGPTVVYSFMQAAGITNDHLTSCFRFHHCI 340
>TAIR|locus:2025697 [details] [associations]
symbol:AT1G80850 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC011713
UniGene:At.28188 HSSP:P05100 HOGENOM:HOG000220754
ProtClustDB:CLSN2679529 EMBL:BT033081 IPI:IPI00524875 PIR:B96841
RefSeq:NP_178200.1 UniGene:At.50058 ProteinModelPortal:Q9SAH6
SMR:Q9SAH6 EnsemblPlants:AT1G80850.1 GeneID:844424
KEGG:ath:AT1G80850 TAIR:At1g80850 InParanoid:Q9SAH6 OMA:ENARQIC
PhylomeDB:Q9SAH6 Genevestigator:Q9SAH6 Uniprot:Q9SAH6
Length = 327
Score = 676 (243.0 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 142/275 (51%), Positives = 172/275 (62%)
Query: 84 PSILRRHEXXXXXXXXXXXXXXXXXXTDSFHSRASIGR-LTRSNSVGIRRKPFPSKPRSV 142
P ILRR+ S S +S R L RS SV S R++
Sbjct: 62 PPILRRNGISMTASYSSDASSSCESSPLSMTSTSSGKRVLRRSGSVSSSS----SLRRNL 117
Query: 143 VSDGGLDSPPPDG-SQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGAL 201
+ D D +KRCAW+TP +D CY AFHDEEWGVPVHDDK+LFELL LSGAL
Sbjct: 118 TEER--DEKASDCFCDGRKRCAWITPKSDQCYIAFHDEEWGVPVHDDKRLFELLSLSGAL 175
Query: 202 SELTWPAILSKRHIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQ 261
+EL+W ILSKR +FREVF+ FDPIA+S+L R+I+ENA Q
Sbjct: 176 AELSWKDILSKRQLFREVFMDFDPIAISELTNKKITSPEIAATTLLSEQKLRSILENANQ 235
Query: 262 ISKVIDEFGSFNNYIWSFVSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTI 321
+ K+I FGSF+ YIW+FV+ KP S+FRYPRQVPVKT KA++ISKDLVRRGFRSV PT+
Sbjct: 236 VCKIIGAFGSFDKYIWNFVNQKPTQSQFRYPRQVPVKTSKAELISKDLVRRGFRSVSPTV 295
Query: 322 IYSFMQVAGVTNDHLTSCFRFQECINAAEVKEENG 356
IYSFMQ AG+TNDHLT CFR +C+ K+E G
Sbjct: 296 IYSFMQTAGLTNDHLTCCFRHHDCMT----KDETG 326
Score = 90 (36.7 bits), Expect = 4.7e-74, Sum P(2) = 4.7e-74
Identities = 20/40 (50%), Positives = 24/40 (60%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKP 40
MS RVRS++ ++ E R VLGPAGNK KP KP
Sbjct: 1 MSAPPRVRSVDSSDREFRSVLGPAGNKLQQKPLSKPVKKP 40
>TAIR|locus:2200447 [details] [associations]
symbol:AT1G15970 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AC010924
HSSP:P05100 HOGENOM:HOG000220754 EMBL:BT029471 EMBL:AK229092
IPI:IPI00536280 PIR:C86294 RefSeq:NP_173049.1 UniGene:At.43545
ProteinModelPortal:Q9S9N7 SMR:Q9S9N7 PaxDb:Q9S9N7 PRIDE:Q9S9N7
EnsemblPlants:AT1G15970.1 GeneID:838167 KEGG:ath:AT1G15970
TAIR:At1g15970 InParanoid:Q9S9N7 OMA:EREFRSV PhylomeDB:Q9S9N7
ProtClustDB:CLSN2679529 Genevestigator:Q9S9N7 Uniprot:Q9S9N7
Length = 352
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 164/351 (46%), Positives = 199/351 (56%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNKTGSLSAWKPASKPSRKIEKSPVEVNAAEEKKXX 60
MS R RS+N E E R VLGP GNK KP P K+EK +E + K
Sbjct: 1 MSVPPRFRSVNSDEREFRSVLGPTGNKLQR----KP---PGMKLEKPMMEKTIIDSKDEK 53
Query: 61 XXXXXXXXXXXXXXXXXXHSLSVPSILRRHEXXXXXXXXXXXXXXXXXXTDSFHSRASIG 120
S SILR++ S S +S
Sbjct: 54 AKKPTTPASPRTTLKQCSSLCS--SILRKNSASMTASYSSDASSSCESSPLSVASSSSCK 111
Query: 121 RLTR-SNSVGIRRKPFPSKPRSVVSDGGLDSPPPDGSQTKKRCAWVTPNTDPCYAAFHDE 179
++ R S SV RK K VS G + DG +KRCAW+TP DPCY AFHDE
Sbjct: 112 KVVRRSGSVSSTRKLSVGKEEEKVS-GDCFA---DG---RKRCAWITPKADPCYVAFHDE 164
Query: 180 EWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFVGFDPIAVSKLNXXXXXXX 239
EWGVPVHDDKKLFELL LSGAL+EL+W ILS+RHI REVF+ FDP+AV++LN
Sbjct: 165 EWGVPVHDDKKLFELLCLSGALAELSWTDILSRRHILREVFMDFDPVAVAELNDKKLTAP 224
Query: 240 XXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSFVSHKPIVSRFRYPRQVPVKT 299
R+I++N+R + K+I E GS Y+W+FV++KP S+FRY RQVPVKT
Sbjct: 225 GTAAISLLSEVKIRSILDNSRHVRKIIAECGSLKKYMWNFVNNKPTQSQFRYQRQVPVKT 284
Query: 300 PKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSCFRFQECINAAE 350
KA+ ISKDLVRRGFRSV PT+IYSFMQ AG+TNDHL CFR+Q+C AE
Sbjct: 285 SKAEFISKDLVRRGFRSVSPTVIYSFMQAAGLTNDHLIGCFRYQDCCVDAE 335
>TAIR|locus:2037268 [details] [associations]
symbol:AT1G75090 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0006306 "DNA methylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
GenomeReviews:CT485782_GR eggNOG:COG2818 KO:K01246 GO:GO:0008725
GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150 UniGene:At.17945
EMBL:AY034999 EMBL:AY063008 IPI:IPI00546123 RefSeq:NP_565100.1
HSSP:P05100 ProteinModelPortal:Q94CA9 SMR:Q94CA9
EnsemblPlants:AT1G75090.1 GeneID:843846 KEGG:ath:AT1G75090
TAIR:At1g75090 HOGENOM:HOG000220754 InParanoid:Q94CA9 OMA:RETKSHE
PhylomeDB:Q94CA9 ProtClustDB:CLSN2722806 ArrayExpress:Q94CA9
Genevestigator:Q94CA9 Uniprot:Q94CA9
Length = 329
Score = 604 (217.7 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 110/208 (52%), Positives = 144/208 (69%)
Query: 160 KRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
KRC W+TPN+DP Y FHDEEWGVPV DDKKLFELLV S AL+E +WP+IL +R FR++
Sbjct: 119 KRCHWITPNSDPIYVLFHDEEWGVPVRDDKKLFELLVFSQALAEFSWPSILRRRDDFRKL 178
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSF 279
F FDP A+++ RAI+ENA+ + KV EFGSF+NY W F
Sbjct: 179 FEEFDPSAIAQFTEKRLMSLRVNGCLILSEQKLRAIVENAKSVLKVKQEFGSFSNYCWRF 238
Query: 280 VSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSC 339
V+HKP+ + +RY RQVPVK+PKA+ ISKD+++RGFR VGPT++YSF+Q +G+ NDHLT+C
Sbjct: 239 VNHKPLRNGYRYGRQVPVKSPKAEYISKDMMQRGFRCVGPTVMYSFLQASGIVNDHLTAC 298
Query: 340 FRFQECINAAEVKEENGIPDNDENKKTD 367
FR+QEC V+ E ++ K D
Sbjct: 299 FRYQEC----NVETERETKSHETETKLD 322
Score = 43 (20.2 bits), Expect = 1.6e-61, Sum P(2) = 1.6e-61
Identities = 16/51 (31%), Positives = 25/51 (49%)
Query: 1 MSGATRVRSMNVAESETRPVLGPAGNK---TGSLSAWKPASKPSRKIEKSP 48
MS +++RS E+R +L GN+ T + KP P ++ KSP
Sbjct: 1 MSIVSKLRSPVKPIDESRAILCSTGNRFKVTKTEMTKKPQLNP--RVTKSP 49
>TAIR|locus:1006230719 [details] [associations]
symbol:AT1G13635 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 EMBL:CP002684
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 IPI:IPI00521326 RefSeq:NP_001184988.1
RefSeq:NP_973818.1 UniGene:At.19663 ProteinModelPortal:F4HSJ2
SMR:F4HSJ2 EnsemblPlants:AT1G13635.1 EnsemblPlants:AT1G13635.2
GeneID:2745751 KEGG:ath:AT1G13635 OMA:HNWTEIL Uniprot:F4HSJ2
Length = 311
Score = 536 (193.7 bits), Expect = 1.2e-51, P = 1.2e-51
Identities = 90/197 (45%), Positives = 132/197 (67%)
Query: 154 DGSQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKR 213
+ S KRC W+T +D Y FHD++WGVPV+DD LFE L +SG L + W IL ++
Sbjct: 109 NSSDEPKRCNWITKKSDEVYVMFHDQQWGVPVYDDNLLFEFLAMSGMLMDYNWTEILKRK 168
Query: 214 HIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFN 273
FRE F FDP V+K+ R I++NA+ I+KV++EFGSF+
Sbjct: 169 EHFREAFCEFDPNRVAKMGEKEIAEIASNKAIMLQESRVRCIVDNAKCITKVVNEFGSFS 228
Query: 274 NYIWSFVSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTN 333
+++W F+ +KPI+++F+Y R VP+++PKA++ISKD+++RGFR VGP I++SFMQ AG+T
Sbjct: 229 SFVWGFMDYKPIINKFKYSRNVPLRSPKAEIISKDMIKRGFRFVGPVIVHSFMQAAGLTI 288
Query: 334 DHLTSCFRFQECINAAE 350
DHL CFR +C++ AE
Sbjct: 289 DHLVDCFRHGDCVSLAE 305
>TAIR|locus:2156329 [details] [associations]
symbol:AT5G44680 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=IEA;ISS]
[GO:0009637 "response to blue light" evidence=RCA] [GO:0010155
"regulation of proton transport" evidence=RCA] [GO:0046777 "protein
autophosphorylation" evidence=RCA] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 EMBL:CP002688 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:AB016874 HSSP:P05100 EMBL:BT003900 EMBL:BT004932
IPI:IPI00531451 RefSeq:NP_199281.1 UniGene:At.23434
ProteinModelPortal:Q9FIZ5 SMR:Q9FIZ5 EnsemblPlants:AT5G44680.1
GeneID:834497 KEGG:ath:AT5G44680 TAIR:At5g44680 InParanoid:Q9FIZ5
OMA:NTFREAF PhylomeDB:Q9FIZ5 ProtClustDB:CLSN2916729
ArrayExpress:Q9FIZ5 Genevestigator:Q9FIZ5 Uniprot:Q9FIZ5
Length = 353
Score = 501 (181.4 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 92/189 (48%), Positives = 127/189 (67%)
Query: 157 QTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIF 216
+ KKRC+++T ++DP Y A+HD+EWGVPVHDD LFELLVL+GA W ++L +R+ F
Sbjct: 161 EKKKRCSFITTSSDPIYVAYHDKEWGVPVHDDNLLFELLVLTGAQVGSDWTSVLKRRNTF 220
Query: 217 REVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYI 276
RE F GF+ V+ N A+++NA+QI KV + GSFN YI
Sbjct: 221 REAFSGFEAELVADFNEKKIQSIVNDYGINLSQVL--AVVDNAKQILKVKRDLGSFNKYI 278
Query: 277 WSFVSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHL 336
W F+ HKP+ +++ +++PVKT K++ ISKD+VRRGFR VGPT+I+S MQ AG+TNDHL
Sbjct: 279 WGFMKHKPVTTKYTSCQKIPVKTSKSETISKDMVRRGFRFVGPTVIHSLMQAAGLTNDHL 338
Query: 337 TSCFRFQEC 345
+C R EC
Sbjct: 339 ITCPRHLEC 347
Score = 43 (20.2 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 15/43 (34%), Positives = 20/43 (46%)
Query: 11 NVAESETRPVLGPAGNKTGSL----SAWKPASKPSRKI-EKSP 48
N+++ RPVL P N+ +L S K KP I K P
Sbjct: 13 NISQINGRPVLQPKSNQVPTLDRRNSLKKSPPKPLNPIASKIP 55
>TAIR|locus:2087710 [details] [associations]
symbol:AT3G12710 species:3702 "Arabidopsis thaliana"
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA;ISS] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=IEA;ISS] [GO:0006306 "DNA methylation"
evidence=RCA] InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352
EMBL:CP002686 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 EMBL:AB024033 HSSP:P05100
IPI:IPI00517252 RefSeq:NP_566433.1 UniGene:At.23022
ProteinModelPortal:Q9LTW3 SMR:Q9LTW3 EnsemblPlants:AT3G12710.1
GeneID:820453 KEGG:ath:AT3G12710 TAIR:At3g12710 InParanoid:Q9LTW3
OMA:SCPRHRV PhylomeDB:Q9LTW3 ProtClustDB:CLSN2914975
Genevestigator:Q9LTW3 Uniprot:Q9LTW3
Length = 312
Score = 487 (176.5 bits), Expect = 1.8e-46, P = 1.8e-46
Identities = 90/193 (46%), Positives = 125/193 (64%)
Query: 153 PDGSQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSK 212
P+ + +RC+++TP +DP Y A+HDEEWGVPVHDDK LFELL LSGA W + L K
Sbjct: 115 PNPNPHPQRCSFLTPTSDPIYVAYHDEEWGVPVHDDKTLFELLTLSGAQVGSDWTSTLRK 174
Query: 213 RHIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSF 272
RH +R+ F+ F+ V+KL R ++ENA++I ++ F S
Sbjct: 175 RHDYRKAFMEFEAEVVAKLTEKEMNAISIEYKIEMSKV--RGVVENAKKIVEIKKAFVSL 232
Query: 273 NNYIWSFVSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVT 332
Y+W FV+HKPI + ++ ++PVKT K++ ISKD+VRRGFR VGPT+++SFMQ AG+T
Sbjct: 233 EKYLWGFVNHKPISTNYKLGHKIPVKTSKSESISKDMVRRGFRFVGPTVVHSFMQAAGLT 292
Query: 333 NDHLTSCFRFQEC 345
NDHL +C R C
Sbjct: 293 NDHLITCCRHAPC 305
>TIGR_CMR|GSU_0567 [details] [associations]
symbol:GSU_0567 "DNA-3-methyladenine glycosylase I"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE017180 GenomeReviews:AE017180_GR
RefSeq:NP_951625.1 ProteinModelPortal:Q74FN9 SMR:Q74FN9
GeneID:2685903 KEGG:gsu:GSU0567 PATRIC:22023883 OMA:HELFEYL
ProtClustDB:CLSK746102 BioCyc:GSUL243231:GH27-592-MONOMER
Uniprot:Q74FN9
Length = 191
Score = 423 (154.0 bits), Expect = 1.1e-39, P = 1.1e-39
Identities = 80/185 (43%), Positives = 106/185 (57%)
Query: 160 KRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
+RC W TDP Y A+HD EWGVP HDD+ LFE+L+L GA + L+W IL KR +R
Sbjct: 3 QRCEWC--GTDPLYVAYHDGEWGVPAHDDRHLFEMLILEGAQAGLSWLTILRKREAYRRA 60
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSF 279
F GFD V+ + + I NAR + K+ +EFGS + Y+W F
Sbjct: 61 FAGFDAETVAAWSEADVARLLADPGIVRNRLKIESTIRNARGVLKIREEFGSLDAYLWRF 120
Query: 280 VSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSC 339
V H P + +R +P +T ++D +SKDL RRGF VG TI Y+FMQ G+ NDH+ C
Sbjct: 121 VDHAPRHNAWRSLTDIPARTEQSDAMSKDLKRRGFNFVGSTICYAFMQAVGMVNDHVVHC 180
Query: 340 FRFQE 344
FR E
Sbjct: 181 FRHDE 185
>TIGR_CMR|CBU_0383 [details] [associations]
symbol:CBU_0383 "DNA-3-methyladenine glycosidase I"
species:227377 "Coxiella burnetii RSA 493" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
OMA:KCGENFS GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 TIGRFAMs:TIGR00624 EMBL:AE016828
GenomeReviews:AE016828_GR RefSeq:NP_819422.2 GeneID:1208266
KEGG:cbu:CBU_0383 PATRIC:17929461 ProtClustDB:CLSK914033
BioCyc:CBUR227377:GJ7S-384-MONOMER Uniprot:Q83EE1
Length = 212
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 80/189 (42%), Positives = 117/189 (61%)
Query: 159 KKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFRE 218
K+RCAWV+ DP Y +HD EWGVP++DD+ LFE L+L G + L+W IL KR+ +R+
Sbjct: 18 KERCAWVS--NDPLYIHYHDLEWGVPIYDDRLLFEFLILEGMQAGLSWLTILKKRNNYRD 75
Query: 219 VFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWS 278
F FD +SK N +A I NA+ +V E+ +F++YIW
Sbjct: 76 SFNNFDASIISKYNPRKIDRLLENAGIIRNKLKIQATINNAKAFLEVKKEWRNFSDYIWH 135
Query: 279 FVSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTS 338
FV PI ++++ +Q+P ++ +DV+SKDL +RGF+ VG TI Y+FMQ G+ NDH T+
Sbjct: 136 FVDGHPIQNQWKNAKQIPTRSAISDVLSKDLKKRGFKFVGSTICYAFMQAVGMVNDHTTN 195
Query: 339 CFRFQECIN 347
CFR++E N
Sbjct: 196 CFRYEEIKN 204
>TIGR_CMR|CPS_2351 [details] [associations]
symbol:CPS_2351 "DNA-3-methyladenine glycosylase I"
species:167879 "Colwellia psychrerythraea 34H" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
EMBL:CP000083 GenomeReviews:CP000083_GR RefSeq:YP_269071.1
ProteinModelPortal:Q482E7 STRING:Q482E7 GeneID:3521376
KEGG:cps:CPS_2351 PATRIC:21467793 OMA:PNELVIC
ProtClustDB:CLSK742465 BioCyc:CPSY167879:GI48-2416-MONOMER
Uniprot:Q482E7
Length = 194
Score = 369 (135.0 bits), Expect = 5.8e-34, P = 5.8e-34
Identities = 72/182 (39%), Positives = 105/182 (57%)
Query: 161 RCAWV-TPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
RC W+ T D Y +HDEEWGVPV++DKK+FE LVL A + L+W IL KR +R++
Sbjct: 8 RCPWLDTSKLD--YVKYHDEEWGVPVYEDKKMFESLVLESAQAGLSWYTILKKREGYRKL 65
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSF 279
F F+ V+K A I NA + ++ +EFGSF +IWS+
Sbjct: 66 FADFEVTKVAKFTDDDVERLMQDASIVRYRRKIEAAINNANRFIEIQNEFGSFTKFIWSY 125
Query: 280 VSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSC 339
V+++ IV+ + +P +D ++KDL +RGF+ +GPT +YS +Q G+ NDH SC
Sbjct: 126 VNNETIVNNLDTIKDYVATSPISDALAKDLKKRGFKFLGPTTLYSHLQATGLINDHSNSC 185
Query: 340 FR 341
FR
Sbjct: 186 FR 187
>UNIPROTKB|P05100 [details] [associations]
symbol:tag "3-methyl-adenine DNA glycosylase I,
constitutive" species:83333 "Escherichia coli K-12" [GO:0006284
"base-excision repair" evidence=IEA] [GO:0003824 "catalytic
activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0008725 "DNA-3-methyladenine glycosylase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
InterPro:IPR004597 InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 ECOGENE:EG10986 EMBL:J02606 EMBL:X03845 EMBL:U00039
EMBL:U00096 EMBL:AP009048 PIR:A24604 RefSeq:NP_418005.1
RefSeq:YP_491887.1 PDB:1LMZ PDB:1NKU PDB:1P7M PDBsum:1LMZ
PDBsum:1NKU PDBsum:1P7M ProteinModelPortal:P05100 SMR:P05100
DIP:DIP-10950N IntAct:P05100 MINT:MINT-1230071
EnsemblBacteria:EBESCT00000001171 EnsemblBacteria:EBESCT00000015713
GeneID:12932561 GeneID:947137 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR KEGG:ecj:Y75_p3628 KEGG:eco:b3549
PATRIC:32122570 EchoBASE:EB0979 eggNOG:COG2818 HOGENOM:HOG000220753
KO:K01246 OMA:KCGENFS ProtClustDB:PRK10353
BioCyc:EcoCyc:EG10986-MONOMER BioCyc:ECOL316407:JW3518-MONOMER
BioCyc:MetaCyc:EG10986-MONOMER EvolutionaryTrace:P05100
Genevestigator:P05100 GO:GO:0008725 GO:GO:0046872 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 TIGRFAMs:TIGR00624
Uniprot:P05100
Length = 187
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 71/180 (39%), Positives = 101/180 (56%)
Query: 160 KRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREV 219
+RC WV+ DP Y A+HD EWGVP D KKLFE++ L G + L+W +L KR +R
Sbjct: 2 ERCGWVSQ--DPLYIAYHDNEWGVPETDSKKLFEMICLEGQQAGLSWITVLKKRENYRAC 59
Query: 220 FVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSF 279
F FDP+ V+ + +AII NAR ++ F +++WSF
Sbjct: 60 FHQFDPVKVAAMQEEDVERLVQDAGIIRHRGKIQAIIGNARAYLQMEQNGEPFVDFVWSF 119
Query: 280 VSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSC 339
V+H+P V++ ++P T +D +SK L +RGF+ VG TI YSFMQ G+ NDH+ C
Sbjct: 120 VNHQPQVTQATTLSEIPTSTSASDALSKALKKRGFKFVGTTICYSFMQACGLVNDHVVGC 179
>UNIPROTKB|Q0C3V6 [details] [associations]
symbol:tag "DNA-3-methyladenine glycosylase I"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 eggNOG:COG2818 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GO:GO:0006281 EMBL:CP000158 GenomeReviews:CP000158_GR
RefSeq:YP_759587.1 ProteinModelPortal:Q0C3V6 SMR:Q0C3V6
STRING:Q0C3V6 GeneID:4288756 KEGG:hne:HNE_0860 PATRIC:32214528
OMA:LVECISY ProtClustDB:CLSK2531831
BioCyc:HNEP228405:GI69-902-MONOMER Uniprot:Q0C3V6
Length = 193
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 68/180 (37%), Positives = 98/180 (54%)
Query: 162 CAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFV 221
C W P TDP Y A+HDEEWGVP D + L+E L L G + L+W IL KR RE F
Sbjct: 7 CGWA-PVTDPIYRAYHDEEWGVPERDPRALWEKLQLDGMQAGLSWITILRKRESIREEFD 65
Query: 222 GFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSFVS 281
FDP +++ A+I NAR +++ F++Y W +V
Sbjct: 66 EFDPEKLARWTPRRAEKALTNPGIIRSPKKIDAVIGNARSYLSMMEAGDDFSDYCWGYVG 125
Query: 282 HKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSCFR 341
KP+V++++ R+ P T + +S+DL +RGF+ VGPTI+Y++ Q G+ NDH C R
Sbjct: 126 GKPVVNKWKNFREAPTSTDWSAAMSRDLKKRGFKFVGPTIVYAWAQAVGMVNDHEVGCPR 185
>TIGR_CMR|SO_0016 [details] [associations]
symbol:SO_0016 "DNA-3-methyladenine glycosidase I"
species:211586 "Shewanella oneidensis MR-1" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR004597 InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 HOGENOM:HOG000220753 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
TIGRFAMs:TIGR00624 EMBL:AE014299 GenomeReviews:AE014299_GR
HSSP:P05100 RefSeq:NP_715658.1 ProteinModelPortal:Q8EKS4 SMR:Q8EKS4
GeneID:1167914 KEGG:son:SO_0016 PATRIC:23519723 OMA:FKMLILE
ProtClustDB:CLSK905542 Uniprot:Q8EKS4
Length = 191
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 66/185 (35%), Positives = 97/185 (52%)
Query: 161 RCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVF 220
RC WV+ DP Y +HD WG PV+D K+LF L L G + L+W IL K+ + + F
Sbjct: 5 RCNWVSD--DPLYRDYHDNVWGRPVYDPKELFAKLCLDGQQAGLSWITILKKQQNYEQAF 62
Query: 221 VGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSFV 280
F+P ++ + +II NA+ + F+ ++WSFV
Sbjct: 63 ADFEPAVIATFDDAKVEELMANPGIVRNRLKIHSIIRNAKGYLAYTADGEDFSAFLWSFV 122
Query: 281 SHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSCF 340
KP V++F Q+P +TP+++ +SK L + GF VGPTI Y+FMQ G+ NDHL C
Sbjct: 123 GGKPRVNQFTSMSQIPAQTPESEAMSKALKKLGFNFVGPTICYAFMQAVGMVNDHLVDCV 182
Query: 341 RFQEC 345
+ C
Sbjct: 183 AYDAC 187
>UNIPROTKB|Q9KRH0 [details] [associations]
symbol:VC1672 "DNA-3-methyladenine glycosidase I"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0006281 "DNA repair" evidence=ISS] [GO:0008725
"DNA-3-methyladenine glycosylase activity" evidence=ISS]
InterPro:IPR005019 InterPro:IPR011257 Pfam:PF03352 KO:K01246
GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30 SUPFAM:SSF48150
GenomeReviews:AE003852_GR GO:GO:0006281 HSSP:P05100 OMA:FKMLILE
EMBL:AE004245 PIR:E82171 RefSeq:NP_231308.1
ProteinModelPortal:Q9KRH0 DNASU:2613803 GeneID:2613803
KEGG:vch:VC1672 PATRIC:20082406 ProtClustDB:CLSK874490
Uniprot:Q9KRH0
Length = 193
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/178 (36%), Positives = 95/178 (53%)
Query: 162 CAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFV 221
CAW + P +HD+EWG VHDD KLFE L L GA + L+W +L KR +R+ F+
Sbjct: 9 CAWAMNH--PLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFL 66
Query: 222 GFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSFVS 281
G+D +++ + ++ NAR + EFGS + +W FV
Sbjct: 67 GYDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVG 126
Query: 282 HKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSC 339
+P ++R+ VP T ++ +SK L +RGF+ VG TI Y+FMQ G+ NDHL C
Sbjct: 127 GQPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGC 184
>TIGR_CMR|VC_1672 [details] [associations]
symbol:VC_1672 "DNA-3-methyladenine glycosidase I"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006281 "DNA
repair" evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 GenomeReviews:AE003852_GR
GO:GO:0006281 HSSP:P05100 OMA:FKMLILE EMBL:AE004245 PIR:E82171
RefSeq:NP_231308.1 ProteinModelPortal:Q9KRH0 DNASU:2613803
GeneID:2613803 KEGG:vch:VC1672 PATRIC:20082406
ProtClustDB:CLSK874490 Uniprot:Q9KRH0
Length = 193
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/178 (36%), Positives = 95/178 (53%)
Query: 162 CAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFREVFV 221
CAW + P +HD+EWG VHDD KLFE L L GA + L+W +L KR +R+ F+
Sbjct: 9 CAWAMNH--PLEREYHDKEWGRAVHDDTKLFEFLTLEGAQAGLSWLTVLKKREGYRQAFL 66
Query: 222 GFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFGSFNNYIWSFVS 281
G+D +++ + ++ NAR + EFGS + +W FV
Sbjct: 67 GYDLQRLAQCDESHVEQIIAEYDVVKHRGKIASVFSNARAALALQQEFGSLDAALWQFVG 126
Query: 282 HKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAGVTNDHLTSC 339
+P ++R+ VP T ++ +SK L +RGF+ VG TI Y+FMQ G+ NDHL C
Sbjct: 127 GQPKINRWVSMSDVPASTEESKAMSKFLKKRGFKFVGETICYAFMQACGLVNDHLVGC 184
>TIGR_CMR|SPO_1900 [details] [associations]
symbol:SPO_1900 "DNA-3-methyladenine glycosylase I"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0006281 "DNA repair"
evidence=ISS] [GO:0008725 "DNA-3-methyladenine glycosylase
activity" evidence=ISS] InterPro:IPR005019 InterPro:IPR011257
Pfam:PF03352 EMBL:CP000031 GenomeReviews:CP000031_GR
HOGENOM:HOG000220753 KO:K01246 GO:GO:0008725 GO:GO:0006284
Gene3D:1.10.340.30 SUPFAM:SSF48150 RefSeq:YP_167136.1
ProteinModelPortal:Q5LS69 GeneID:3195713 KEGG:sil:SPO1900
PATRIC:23377131 OMA:WRTILAK ProtClustDB:CLSK713517 Uniprot:Q5LS69
Length = 202
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 69/189 (36%), Positives = 98/189 (51%)
Query: 151 PPPDGSQTKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAIL 210
P PDG + RC W N+ P + +HD EWG PV DD++LFE L L S L+W IL
Sbjct: 6 PGPDG---QPRCRWC--NSAPEFFDYHDREWGYPVGDDRRLFEKLCLESFQSGLSWRTIL 60
Query: 211 SKRHIFREVFVGFDPIAVSKLNXXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFG 270
+KR FR F GFD ++ + A+I NAR++ ++ E G
Sbjct: 61 AKRENFRAAFDGFDWTRIAAYDAADVARLLDDAGIIRHRGKIEAVINNARRMGDLLAEHG 120
Query: 271 SFNNYIWSFVSHKPIVSRFRYPRQVPVKTPKADVISKDLVRRGFRSVGPTIIYSFMQVAG 330
S Y+WS+ KP P+ + P + +SKDL +RG++ VGPT +++FMQ G
Sbjct: 121 SLAAYVWSY-EPKP--EDLPEPQTASI-IPASTAMSKDLKKRGWKFVGPTTVFAFMQAMG 176
Query: 331 VTNDHLTSC 339
+ NDH C
Sbjct: 177 LVNDHARGC 185
>DICTYBASE|DDB_G0271050 [details] [associations]
symbol:magA "methyladenine glycosylase" species:44689
"Dictyostelium discoideum" [GO:0008725 "DNA-3-methyladenine
glycosylase activity" evidence=IEA;ISS] [GO:0006284 "base-excision
repair" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA;ISS]
[GO:0003824 "catalytic activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR005019
InterPro:IPR011257 Pfam:PF03352 dictyBase:DDB_G0271050
EMBL:AAFI02000005 GenomeReviews:CM000150_GR eggNOG:COG2818
KO:K01246 GO:GO:0008725 GO:GO:0006284 Gene3D:1.10.340.30
SUPFAM:SSF48150 GO:GO:0006281 RefSeq:XP_001134476.1
ProteinModelPortal:Q1ZXP8 SMR:Q1ZXP8 STRING:Q1ZXP8
EnsemblProtists:DDB0232992 GeneID:8617613 KEGG:ddi:DDB_G0271050
InParanoid:Q1ZXP8 ProtClustDB:CLSZ2733540 Uniprot:Q1ZXP8
Length = 290
Score = 266 (98.7 bits), Expect = 4.8e-23, P = 4.8e-23
Identities = 61/191 (31%), Positives = 94/191 (49%)
Query: 158 TKKRCAWVTPNTDPCYAAFHDEEWGVPVHDDKKLFELLVLSGALSELTWPAILSKRHIFR 217
+KKRC W++ D Y +HD EWG D ++LFE + L + L+W +L KR +R
Sbjct: 89 SKKRCFWISLTKDEEYIHYHDNEWGKENRDSQRLFEKICLEAQQAGLSWITVLKKRQNYR 148
Query: 218 EVFVGFDP-IAVSKLN-XXXXXXXXXXXXXXXXXXXXRAIIENARQISKVIDEFG-SFNN 274
+ F FDP + V + +AI++NAR K+ D+ F+
Sbjct: 149 DSFYNFDPKLIVDNITPEVIENSLMKNTGLIRNRLKLQAIVDNARAYLKMRDQDKIEFST 208
Query: 275 YIWSFVSHKPIVS-RFRYPRQVPVKTPK-----ADVISKDLVRRGFRSVGPTIIYSFMQV 328
+IWSFV++K + R V P +D +S L ++GF+ +G T +Y+FMQ
Sbjct: 209 FIWSFVNNKSSIGQRVTGDTSVQGSRPLTRNEVSDAMSVALKKKGFKFIGTTTLYAFMQS 268
Query: 329 AGVTNDHLTSC 339
G+ NDH C
Sbjct: 269 VGIINDHCKDC 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.316 0.131 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 385 327 0.00088 116 3 11 22 0.42 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 17
No. of states in DFA: 620 (66 KB)
Total size of DFA: 226 KB (2124 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 23.97u 0.13s 24.10t Elapsed: 00:00:01
Total cpu time: 23.98u 0.13s 24.11t Elapsed: 00:00:01
Start: Mon May 20 19:13:54 2013 End: Mon May 20 19:13:55 2013