BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 016658
(385 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|118486874|gb|ABK95271.1| unknown [Populus trichocarpa]
Length = 418
Score = 157 bits (397), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 85/102 (83%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS 130
PP R +SPA ARRGRSP P SK+ S PPRKAS +SLVL++DSL+RNVNEGHLREIFS
Sbjct: 68 PPPRKRSPAEGARRGRSPPPQSKKVSPPPRKASPIRESLVLHVDSLTRNVNEGHLREIFS 127
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
NFGEVV VEL MDR VNLP+G GYV FKTRADAEKA LYMDG
Sbjct: 128 NFGEVVHVELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDG 169
>gi|224117596|ref|XP_002317618.1| predicted protein [Populus trichocarpa]
gi|222860683|gb|EEE98230.1| predicted protein [Populus trichocarpa]
Length = 418
Score = 157 bits (397), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 85/102 (83%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS 130
PP R +SPA ARRGRSP P SK+ S PPRKAS +SLVL++DSL+RNVNEGHLREIFS
Sbjct: 68 PPPRKRSPAEGARRGRSPPPQSKKVSPPPRKASPIRESLVLHVDSLTRNVNEGHLREIFS 127
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
NFGEVV VEL MDR VNLP+G GYV FKTRADAEKA LYMDG
Sbjct: 128 NFGEVVHVELAMDRTVNLPKGFGYVEFKTRADAEKALLYMDG 169
>gi|255544704|ref|XP_002513413.1| ribonucleic acid binding protein S1, putative [Ricinus communis]
gi|223547321|gb|EEF48816.1| ribonucleic acid binding protein S1, putative [Ricinus communis]
Length = 423
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 74/97 (76%), Positives = 83/97 (85%)
Query: 76 KSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEV 135
KSPA ARRGRSP P S++AS PPRKAS +SLVL+IDSLSRNVNEGHL+EIFSNFGE+
Sbjct: 77 KSPAEVARRGRSPPPQSRKASPPPRKASPTRESLVLHIDSLSRNVNEGHLKEIFSNFGEI 136
Query: 136 VDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ VEL MDR+VNLP+G GYV FKTR DAEKA LYMDG
Sbjct: 137 IHVELAMDRSVNLPKGYGYVEFKTRTDAEKALLYMDG 173
>gi|225462181|ref|XP_002268483.1| PREDICTED: uncharacterized protein LOC100267894 [Vitis vinifera]
gi|296082773|emb|CBI21778.3| unnamed protein product [Vitis vinifera]
Length = 420
Score = 147 bits (372), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 78/119 (65%), Positives = 91/119 (76%), Gaps = 5/119 (4%)
Query: 74 RNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFG 133
+ KSP VA +RGRSP P SKR S PPRK S +SLVL+I SLSRNVNEGHL+EIFSNFG
Sbjct: 68 KRKSPEVA-KRGRSPPPQSKRTSPPPRKVSPIRESLVLHIGSLSRNVNEGHLKEIFSNFG 126
Query: 134 EVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF----HRLQSLLQLLQREIV 188
EVV VEL MDR VNLP+G GYV FKTR+DAEKAQLYMDG + +++ L QR+ +
Sbjct: 127 EVVHVELAMDRTVNLPKGYGYVEFKTRSDAEKAQLYMDGAQIDGNVVRAKFTLPQRQKI 185
>gi|356525776|ref|XP_003531499.1| PREDICTED: uncharacterized protein LOC100804778 [Glycine max]
Length = 422
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 79/96 (82%)
Query: 79 AVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDV 138
A AARRGRSP P SKRAS PPRK S +SLVL+++ LSRNVNEGHL+EIFSNFGEV+ V
Sbjct: 74 ADAARRGRSPPPQSKRASPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVISV 133
Query: 139 ELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
EL MDR VNLP+G GYV+FKTR +AEKA LYMDG
Sbjct: 134 ELAMDRTVNLPKGYGYVQFKTRGEAEKALLYMDGAQ 169
>gi|356556960|ref|XP_003546787.1| PREDICTED: uncharacterized protein LOC100783566 [Glycine max]
Length = 422
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/96 (72%), Positives = 78/96 (81%)
Query: 79 AVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDV 138
A A RRGRSP P SKRAS PPRK S +SLVL+++ LSRNVNEGHL+EIFSNFGEV+ V
Sbjct: 74 ADATRRGRSPPPQSKRASPPPRKPSPVRESLVLHVEKLSRNVNEGHLKEIFSNFGEVISV 133
Query: 139 ELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
EL MDR VNLP+G GYV+FKTR DAEKA LYMDG
Sbjct: 134 ELAMDRTVNLPKGYGYVQFKTRGDAEKALLYMDGAQ 169
>gi|297850070|ref|XP_002892916.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
gi|297338758|gb|EFH69175.1| expressed protein [Arabidopsis lyrata subsp. lyrata]
Length = 412
Score = 131 bits (330), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 73/100 (73%), Positives = 82/100 (82%), Gaps = 5/100 (5%)
Query: 76 KSPAVAARRGRSPAPP---SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNF 132
KSPA ARRGRSP PP SKRASSP +KA E SLVLY+DSLSRNVNEGHL+EIF NF
Sbjct: 70 KSPAGPARRGRSPPPPPPQSKRASSPSKKAVQE--SLVLYVDSLSRNVNEGHLKEIFGNF 127
Query: 133 GEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
GEV+ VE+ +DR+VNLP+G YV FK RADAEKAQL+MDG
Sbjct: 128 GEVIHVEIAIDRSVNLPKGHAYVEFKARADAEKAQLFMDG 167
>gi|440135805|gb|AGB85016.1| arginine/serine-rich 45 protein [Nicotiana tabacum]
Length = 413
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 77/97 (79%)
Query: 76 KSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEV 135
KSPA ++RGRSP P SK+AS PPRK S +S VL++D LSRNVNE HL+EIF NFGE+
Sbjct: 68 KSPAGVSKRGRSPLPLSKKASPPPRKVSPTPESRVLHVDQLSRNVNENHLKEIFGNFGEI 127
Query: 136 VDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ V+LV+D VNLP+G YV FKTR DAEKAQL+MDG
Sbjct: 128 LHVQLVIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDG 164
>gi|449453786|ref|XP_004144637.1| PREDICTED: uncharacterized protein LOC101216970 [Cucumis sativus]
Length = 419
Score = 128 bits (321), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 71/97 (73%), Positives = 82/97 (84%)
Query: 76 KSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEV 135
KSP ARR R+ PP+KR+S PPRK S +SLVL+ID+LSRNV+EGHLREIFSNFGEV
Sbjct: 74 KSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHIDALSRNVHEGHLREIFSNFGEV 133
Query: 136 VDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
V+VEL MDR VNLP+G GYV FKTR+DAEKAQ+YMDG
Sbjct: 134 VNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDG 170
>gi|449504212|ref|XP_004162285.1| PREDICTED: uncharacterized protein LOC101224786 [Cucumis sativus]
Length = 419
Score = 127 bits (319), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/97 (72%), Positives = 82/97 (84%)
Query: 76 KSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEV 135
KSP ARR R+ PP+KR+S PPRK S +SLVL++D+LSRNV+EGHLREIFSNFGEV
Sbjct: 74 KSPTETARRSRASPPPAKRSSPPPRKPSPVRESLVLHVDALSRNVHEGHLREIFSNFGEV 133
Query: 136 VDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
V+VEL MDR VNLP+G GYV FKTR+DAEKAQ+YMDG
Sbjct: 134 VNVELAMDRTVNLPKGYGYVEFKTRSDAEKAQVYMDG 170
>gi|414878628|tpg|DAA55759.1| TPA: hypothetical protein ZEAMMB73_565122 [Zea mays]
gi|448878260|gb|AGE46093.1| arginine/serine-rich splicing factor SR45_1 [Zea mays]
Length = 429
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 7/106 (6%)
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
RSP+PP K+AS PPRK S +S VL ID LSRNVNE HL+EIF NFGEVV+VEL MDR
Sbjct: 84 RSPSPPLKKAS-PPRKVSPPAESAVLCIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRM 142
Query: 146 VNLPRGSGYVRFKTRADAEKAQLYMDGFH------RLQSLLQLLQR 185
VNLPRG GY+ FK RADAEKA L+MDG +L+ LQ QR
Sbjct: 143 VNLPRGYGYIEFKKRADAEKALLHMDGGQIDGNIVKLRFTLQPRQR 188
>gi|414878627|tpg|DAA55758.1| TPA: hypothetical protein ZEAMMB73_565122 [Zea mays]
Length = 405
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/106 (64%), Positives = 77/106 (72%), Gaps = 7/106 (6%)
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
RSP+PP K+AS PPRK S +S VL ID LSRNVNE HL+EIF NFGEVV+VEL MDR
Sbjct: 84 RSPSPPLKKAS-PPRKVSPPAESAVLCIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRM 142
Query: 146 VNLPRGSGYVRFKTRADAEKAQLYMDGFH------RLQSLLQLLQR 185
VNLPRG GY+ FK RADAEKA L+MDG +L+ LQ QR
Sbjct: 143 VNLPRGYGYIEFKKRADAEKALLHMDGGQIDGNIVKLRFTLQPRQR 188
>gi|148906827|gb|ABR16559.1| unknown [Picea sitchensis]
Length = 347
Score = 124 bits (312), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 64/97 (65%), Positives = 77/97 (79%), Gaps = 1/97 (1%)
Query: 76 KSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEV 135
KSP + RRGR+P P + SSP RK S +S+VL+I +L+RNVNEGHL+EIF +FGEV
Sbjct: 61 KSPTSSTRRGRTP-PLLPKQSSPIRKPSPPPESVVLHIANLTRNVNEGHLKEIFCSFGEV 119
Query: 136 VDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
V+VEL MDR+V LP+G GYV FKTRADAEKA LYMDG
Sbjct: 120 VNVELSMDRSVQLPKGYGYVEFKTRADAEKALLYMDG 156
>gi|81074820|gb|ABB55376.1| putative arginine/serine-rich protein-like [Solanum tuberosum]
Length = 392
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 4/106 (3%)
Query: 71 PPQRNKSPAVAARRGRSPAPP----SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
PP + KSPA ++RGRSP PP SK+AS PPRK S +S V+++D LSRNVNE HL+
Sbjct: 68 PPSQRKSPAGVSKRGRSPPPPPPPESKKASPPPRKVSPIPESRVIHVDQLSRNVNENHLK 127
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIF NFGE++ V+L +D VNLP+G YV FKTR DAEKAQL+MDG
Sbjct: 128 EIFGNFGEILHVQLAIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDG 173
>gi|82400144|gb|ABB72811.1| putative arginine/serine-rich protein [Solanum tuberosum]
Length = 392
Score = 120 bits (302), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 65/106 (61%), Positives = 80/106 (75%), Gaps = 4/106 (3%)
Query: 71 PPQRNKSPAVAARRGRSPAPP----SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
PP + KSPA ++RGRSP PP SK+AS PPRK S +S V+++D LSRNVNE HL+
Sbjct: 68 PPSQRKSPAGVSKRGRSPPPPPPPESKKASPPPRKVSPIPESRVIHVDQLSRNVNENHLK 127
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIF NFGE++ V+L +D VNLP+G YV FKTR DAEKAQL+MDG
Sbjct: 128 EIFGNFGEILHVQLAIDHVVNLPKGFAYVEFKTRIDAEKAQLHMDG 173
>gi|222619908|gb|EEE56040.1| hypothetical protein OsJ_04833 [Oryza sativa Japonica Group]
Length = 1120
Score = 120 bits (301), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 74/108 (68%), Gaps = 18/108 (16%)
Query: 82 ARRGRSPAPPSKRASSPPRK-----------------ASTENDSLVLYIDSLSRNVNEGH 124
ARRGRSP+ P+KR S P +K AS +S+VL+ID LSRNVNE H
Sbjct: 753 ARRGRSPSSPAKRGS-PSKKGRSPSPPPPKKASPPRKASPAPESVVLHIDHLSRNVNEAH 811
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
L+EIF NFGEVV+VEL MDR VNLPRG GY+ FK R DAEKA LYMDG
Sbjct: 812 LKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKALLYMDG 859
>gi|218189774|gb|EEC72201.1| hypothetical protein OsI_05282 [Oryza sativa Indica Group]
Length = 1224
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 65/108 (60%), Positives = 74/108 (68%), Gaps = 18/108 (16%)
Query: 82 ARRGRSPAPPSKRASSPPRK-----------------ASTENDSLVLYIDSLSRNVNEGH 124
ARRGRSP+ P+KR S P +K AS +S+VL+ID LSRNVNE H
Sbjct: 856 ARRGRSPSSPAKRGS-PSKKGRSPSPPPPKKASPPRKASPAPESVVLHIDHLSRNVNEAH 914
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
L+EIF NFGEVV+VEL MDR VNLPRG GY+ FK R DAEKA LYMDG
Sbjct: 915 LKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKALLYMDG 962
>gi|15027957|gb|AAK76509.1| putative arginine/serine-rich protein [Arabidopsis thaliana]
Length = 414
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 59/67 (88%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
+SLVL++DSLSRNVNE HL+EIF NFGEV+ VE+ MDRAVNLPRG GYV FK RADAEK
Sbjct: 95 QESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEK 154
Query: 166 AQLYMDG 172
AQLYMDG
Sbjct: 155 AQLYMDG 161
>gi|15219287|ref|NP_173107.1| protein arginine/serine-rich 45 [Arabidopsis thaliana]
gi|75337109|sp|Q9SEE9.1|SR45_ARATH RecName: Full=Arginine/serine-rich protein 45
gi|6601502|gb|AAF19004.1|AF151366_1 arginine/serine-rich protein [Arabidopsis thaliana]
gi|9989058|gb|AAG10821.1|AC011808_9 arginine/serine-rich protein [Arabidopsis thaliana]
gi|56382017|gb|AAV85727.1| At1g16610 [Arabidopsis thaliana]
gi|332191354|gb|AEE29475.1| protein arginine/serine-rich 45 [Arabidopsis thaliana]
Length = 414
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 59/67 (88%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
+SLVL++DSLSRNVNE HL+EIF NFGEV+ VE+ MDRAVNLPRG GYV FK RADAEK
Sbjct: 95 QESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEK 154
Query: 166 AQLYMDG 172
AQLYMDG
Sbjct: 155 AQLYMDG 161
>gi|42571507|ref|NP_973844.1| protein arginine/serine-rich 45 [Arabidopsis thaliana]
gi|59958310|gb|AAX12865.1| At1g16610 [Arabidopsis thaliana]
gi|332191355|gb|AEE29476.1| protein arginine/serine-rich 45 [Arabidopsis thaliana]
Length = 407
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 59/67 (88%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
+SLVL++DSLSRNVNE HL+EIF NFGEV+ VE+ MDRAVNLPRG GYV FK RADAEK
Sbjct: 95 QESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEK 154
Query: 166 AQLYMDG 172
AQLYMDG
Sbjct: 155 AQLYMDG 161
>gi|334182625|ref|NP_001185014.1| protein arginine/serine-rich 45 [Arabidopsis thaliana]
gi|332191356|gb|AEE29477.1| protein arginine/serine-rich 45 [Arabidopsis thaliana]
Length = 425
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 53/67 (79%), Positives = 59/67 (88%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
+SLVL++DSLSRNVNE HL+EIF NFGEV+ VE+ MDRAVNLPRG GYV FK RADAEK
Sbjct: 95 QESLVLHVDSLSRNVNEAHLKEIFGNFGEVIHVEIAMDRAVNLPRGHGYVEFKARADAEK 154
Query: 166 AQLYMDG 172
AQLYMDG
Sbjct: 155 AQLYMDG 161
>gi|357451851|ref|XP_003596202.1| RNA-binding protein with serine-rich domain-containing protein
[Medicago truncatula]
gi|355485250|gb|AES66453.1| RNA-binding protein with serine-rich domain-containing protein
[Medicago truncatula]
Length = 415
Score = 115 bits (289), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 53/66 (80%), Positives = 60/66 (90%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+SLVL+++ LSRNVNEGHL+EIFSNFGEVV VELVMDRAVNLP+G GYV FKTR +AEKA
Sbjct: 98 ESLVLHVEKLSRNVNEGHLKEIFSNFGEVVSVELVMDRAVNLPKGYGYVHFKTRGEAEKA 157
Query: 167 QLYMDG 172
LYMDG
Sbjct: 158 LLYMDG 163
>gi|413951260|gb|AFW83909.1| hypothetical protein ZEAMMB73_067199 [Zea mays]
gi|448878262|gb|AGE46094.1| arginine/serine-rich splicing factor SR45_2 transcript I [Zea mays]
gi|448878264|gb|AGE46095.1| arginine/serine-rich splicing factor SR45_2 transcript II [Zea
mays]
Length = 422
Score = 114 bits (284), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 66/92 (71%), Gaps = 6/92 (6%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
AS +S+VL ID LSRNVNE HL+EIF NFGEVV+VEL MDR VNLPRG GY+ FK RA
Sbjct: 95 ASPPAESVVLCIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRA 154
Query: 162 DAEKAQLYMDGFH------RLQSLLQLLQREI 187
DAEKA LYMDG +L+ LQ QR +
Sbjct: 155 DAEKALLYMDGGQIDGNVVKLRFTLQPRQRAV 186
>gi|222629901|gb|EEE62033.1| hypothetical protein OsJ_16815 [Oryza sativa Japonica Group]
Length = 417
Score = 111 bits (278), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 52/72 (72%), Positives = 59/72 (81%)
Query: 101 KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTR 160
KAS +S VL++D LSRNVNE HL+EIF N+GEVV+VEL MDR VNLPRG GYV FK R
Sbjct: 128 KASPPPESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNR 187
Query: 161 ADAEKAQLYMDG 172
ADAEKA LY+DG
Sbjct: 188 ADAEKALLYLDG 199
>gi|148906440|gb|ABR16373.1| unknown [Picea sitchensis]
Length = 413
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 67/102 (65%), Positives = 80/102 (78%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS 130
PP++ SPA A RRGR+P P + SSP RK S +S+VLYI +LSRNVNE HL+EIFS
Sbjct: 63 PPRKKSSPATATRRGRTPPPGPPKKSSPTRKPSPPPESVVLYIGNLSRNVNEAHLKEIFS 122
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
NFGEVV+VEL MDR V LP+G GYV FKTR+DAEKA L+M+G
Sbjct: 123 NFGEVVNVELSMDRVVQLPKGYGYVEFKTRSDAEKALLHMNG 164
>gi|326496072|dbj|BAJ90657.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 406
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 50/70 (71%), Positives = 56/70 (80%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
+ SLVL + LSRN+ EGHLREIF N+GEVV+VEL MD+AVNLPRG GYV FK RADAE
Sbjct: 111 DGPSLVLLVSRLSRNITEGHLREIFENYGEVVNVELSMDKAVNLPRGYGYVEFKMRADAE 170
Query: 165 KAQLYMDGFH 174
KA LYMDG
Sbjct: 171 KALLYMDGAQ 180
>gi|448878376|gb|AGE46151.1| arginine/serine-rich splicing factor SR45 transcript II [Sorghum
bicolor]
Length = 414
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/85 (64%), Positives = 62/85 (72%), Gaps = 6/85 (7%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S VL ID LSRNVNE HL+EIF NFGE+V+VEL MDR VNLPRG GY+ FK RADAEKA
Sbjct: 89 ESAVLCIDHLSRNVNEAHLKEIFGNFGEIVNVELSMDRMVNLPRGYGYIEFKKRADAEKA 148
Query: 167 QLYMDGFH------RLQSLLQLLQR 185
LYMDG +L+ LQ QR
Sbjct: 149 LLYMDGGQIDGNVVKLRFTLQPRQR 173
>gi|357130173|ref|XP_003566725.1| PREDICTED: uncharacterized protein LOC100830616 [Brachypodium
distachyon]
Length = 388
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 56/68 (82%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
+ SLVL++D LSRNVNE HL+EIF N+GEVV+VEL MDR VNLPRG GYV FK RAD E
Sbjct: 93 DQPSLVLHVDRLSRNVNEAHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKRRADTE 152
Query: 165 KAQLYMDG 172
KA LYMDG
Sbjct: 153 KALLYMDG 160
>gi|448878435|gb|AGE46180.1| arginine/serine-rich splicing factor SR45 transcript I
[Physcomitrella patens subsp. patens]
gi|448878437|gb|AGE46181.1| arginine/serine-rich splicing factor SR45 transcript II
[Physcomitrella patens subsp. patens]
Length = 404
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/91 (58%), Positives = 66/91 (72%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
A++ RS +PP KR S + + +S VL++ L+RNVNE HLREIF N+GE+V VEL
Sbjct: 61 AKKIRSSSPPPKRISPAKKLRTPTPESTVLHVGCLTRNVNETHLREIFGNYGEIVHVELA 120
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
MDR VNLP+G GYV FKTR DAEKA +MDG
Sbjct: 121 MDRTVNLPKGYGYVEFKTRVDAEKALAHMDG 151
>gi|168012689|ref|XP_001759034.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689733|gb|EDQ76103.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 394
Score = 109 bits (272), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 53/92 (57%), Positives = 66/92 (71%)
Query: 81 AARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVEL 140
A++ RS +PP KR S + + +S VL++ L+RNVNE HLREIF N+GE+V VEL
Sbjct: 60 GAKKIRSSSPPPKRISPAKKLRTPTPESTVLHVGCLTRNVNETHLREIFGNYGEIVHVEL 119
Query: 141 VMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
MDR VNLP+G GYV FKTR DAEKA +MDG
Sbjct: 120 AMDRTVNLPKGYGYVEFKTRVDAEKALAHMDG 151
>gi|326501514|dbj|BAK02546.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 423
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 72/130 (55%), Positives = 90/130 (69%), Gaps = 8/130 (6%)
Query: 44 SRSLSRSRSLSSSSSPSRSTNSRSRSP-PPQRNKSPAVAARRGRSPAPPSKRASSPPRKA 102
+R+ RS + SSP + RSP PP + SP +R+GRS A P + +SPPRKA
Sbjct: 46 ARTRGRSPPAAKRSSPG---AKKGRSPSPPLKKGSP---SRKGRS-ASPPPKKASPPRKA 98
Query: 103 STENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
S S+VL++D LSRNVNE HL+EIF ++GEVV+VEL MD+ VNLPRG GY+ FK R D
Sbjct: 99 SPPPQSVVLHVDHLSRNVNEAHLKEIFGSYGEVVNVELSMDKFVNLPRGYGYIEFKKRTD 158
Query: 163 AEKAQLYMDG 172
AEKA LYMDG
Sbjct: 159 AEKALLYMDG 168
>gi|297603666|ref|NP_001054414.2| Os05g0105900 [Oryza sativa Japonica Group]
gi|52353606|gb|AAU44172.1| unknown protein [Oryza sativa Japonica Group]
gi|215686601|dbj|BAG88854.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675935|dbj|BAF16328.2| Os05g0105900 [Oryza sativa Japonica Group]
Length = 380
Score = 107 bits (268), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S VL++D LSRNVNE HL+EIF N+GEVV+VEL MDR VNLPRG GYV FK RADAEKA
Sbjct: 64 ESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKA 123
Query: 167 QLYMDG 172
LY+DG
Sbjct: 124 LLYLDG 129
>gi|357126876|ref|XP_003565113.1| PREDICTED: uncharacterized protein LOC100845778 isoform 1
[Brachypodium distachyon]
Length = 418
Score = 107 bits (267), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Query: 83 RRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
R+GRS + P + +SPPRKAS +S+VL++D LSRNVNE HL+EIF +FGEVV+VEL M
Sbjct: 77 RKGRSAS-PPPKKASPPRKASPAPESVVLHVDHLSRNVNEAHLKEIFGSFGEVVNVELSM 135
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
DR VNLPRG GY+ FK RADAEKA LYMDG
Sbjct: 136 DRIVNLPRGYGYIEFKKRADAEKALLYMDG 165
>gi|357126878|ref|XP_003565114.1| PREDICTED: uncharacterized protein LOC100845778 isoform 2
[Brachypodium distachyon]
Length = 422
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 61/90 (67%), Positives = 73/90 (81%), Gaps = 1/90 (1%)
Query: 83 RRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
R+GRS + P + +SPPRKAS +S+VL++D LSRNVNE HL+EIF +FGEVV+VEL M
Sbjct: 77 RKGRSAS-PPPKKASPPRKASPAPESVVLHVDHLSRNVNEAHLKEIFGSFGEVVNVELSM 135
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
DR VNLPRG GY+ FK RADAEKA LYMDG
Sbjct: 136 DRIVNLPRGYGYIEFKKRADAEKALLYMDG 165
>gi|218195935|gb|EEC78362.1| hypothetical protein OsI_18120 [Oryza sativa Indica Group]
Length = 284
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/66 (74%), Positives = 56/66 (84%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S VL++D LSRNVNE HL+EIF N+GEVV+VEL MDR VNLPRG GYV FK RADAEKA
Sbjct: 67 ESTVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKA 126
Query: 167 QLYMDG 172
LY+DG
Sbjct: 127 LLYLDG 132
>gi|115442357|ref|NP_001045458.1| Os01g0959000 [Oryza sativa Japonica Group]
gi|57900284|dbj|BAD87117.1| putative Ser/Arg-related nuclear matrix protein [Oryza sativa
Japonica Group]
gi|113534989|dbj|BAF07372.1| Os01g0959000 [Oryza sativa Japonica Group]
gi|215687373|dbj|BAG91938.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 432
Score = 104 bits (259), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 70/108 (64%), Positives = 83/108 (76%), Gaps = 4/108 (3%)
Query: 66 RSRSP-PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGH 124
R RSP P + SP +++GRSP+PP + +SPPRKAS +S+VL+ID LSRNVNE H
Sbjct: 66 RGRSPSSPAKRGSP---SKKGRSPSPPPPKKASPPRKASPAPESVVLHIDHLSRNVNEAH 122
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
L+EIF NFGEVV+VEL MDR VNLPRG GY+ FK R DAEKA LYMDG
Sbjct: 123 LKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKALLYMDG 170
>gi|168034588|ref|XP_001769794.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678903|gb|EDQ65356.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 400
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 56/98 (57%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Query: 76 KSPAVAARRGRSPAPPSKRASSPPRKASTEN-DSLVLYIDSLSRNVNEGHLREIFSNFGE 134
KS VA + SP PP+K SS P+K T +S VL++ L+RNVNE HL+EIF +GE
Sbjct: 54 KSSDVAKKTRASPPPPTK--SSAPKKLRTPTPESTVLHVGCLTRNVNEAHLKEIFGLYGE 111
Query: 135 VVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+V VEL MDR VNLP+G GYV FK R DAEKA +MDG
Sbjct: 112 IVHVELAMDRTVNLPKGYGYVEFKRRGDAEKALAHMDG 149
>gi|302808477|ref|XP_002985933.1| hypothetical protein SELMODRAFT_424875 [Selaginella moellendorffii]
gi|300146440|gb|EFJ13110.1| hypothetical protein SELMODRAFT_424875 [Selaginella moellendorffii]
Length = 229
Score = 84.3 bits (207), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 78/154 (50%), Gaps = 44/154 (28%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLRE 127
RSP KR + P DS L++ LSRNVNE HL+E
Sbjct: 45 RSPR---------------------KRLAKP------AEDSSRLHVSQLSRNVNESHLKE 77
Query: 128 IFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREI 187
IF N+G+++ V+L MD+ VNLP+G YV +K+++DAEKAQ +MDG
Sbjct: 78 IFGNYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAEKAQQFMDGAQ------------- 124
Query: 188 VRELIMSVLILRRM----GQNDQENPLPVGSHPP 217
V L++SV + R++ G + + + +P PP
Sbjct: 125 VDGLVISVKLTRKVSPARGVSPKRDAVPPRRRPP 158
>gi|302806250|ref|XP_002984875.1| hypothetical protein SELMODRAFT_446044 [Selaginella moellendorffii]
gi|300147461|gb|EFJ14125.1| hypothetical protein SELMODRAFT_446044 [Selaginella moellendorffii]
Length = 354
Score = 83.2 bits (204), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/105 (41%), Positives = 60/105 (57%), Gaps = 27/105 (25%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLRE 127
RSP KR + P DS L++ LSRNVNE HL+E
Sbjct: 45 RSPR---------------------KRLAKP------AEDSSRLHVSQLSRNVNESHLKE 77
Query: 128 IFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
IF N+G+++ V+L MD+ VNLP+G YV +K+++DAEKAQ +MDG
Sbjct: 78 IFGNYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAEKAQQFMDG 122
>gi|384250305|gb|EIE23785.1| hypothetical protein COCSUDRAFT_66096 [Coccomyxa subellipsoidea
C-169]
Length = 406
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 71/122 (58%), Gaps = 19/122 (15%)
Query: 70 PPPQRNKSPA---VAARRGRSPAPP-----SKRASSPPR--------KASTENDSLV--- 110
PPP+R+++ A V + A P +K ++ PR KA+ S V
Sbjct: 70 PPPKRSEAAAEKGVGKGKDADEAMPDAMLKAKSKAAEPRDVDKDAAPKANGRATSPVTTR 129
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ L+RNV E H++EIFS FG + VEL +D+ VNLPRG YV +K R +AEKA+++M
Sbjct: 130 LHVGHLTRNVTEDHIKEIFSTFGAIKSVELSVDKVVNLPRGFAYVEYKDRDEAEKARVHM 189
Query: 171 DG 172
DG
Sbjct: 190 DG 191
>gi|298712976|emb|CBJ26878.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 314
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 49/63 (77%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+L++ +L+RNV HL+EIF ++G+V V+L +D+ VNLP+G +V F RA+AE+AQLY
Sbjct: 1 MLHVSNLTRNVKADHLKEIFGSYGKVTSVDLAVDKRVNLPKGYAFVEFVERAEAEQAQLY 60
Query: 170 MDG 172
+DG
Sbjct: 61 LDG 63
>gi|422292984|gb|EKU20285.1| RNA-binding protein with serine-rich domain 1, partial
[Nannochloropsis gaditana CCMP526]
Length = 374
Score = 76.6 bits (187), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 45/62 (72%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ L+RNV E HL EIF+ FG++ VELV+DR V L RG YV + R DAE+AQLYM
Sbjct: 104 LHVSGLTRNVTEEHLNEIFATFGKLSRVELVLDRRVGLSRGFAYVEYDHRKDAEEAQLYM 163
Query: 171 DG 172
DG
Sbjct: 164 DG 165
>gi|302840391|ref|XP_002951751.1| hypothetical protein VOLCADRAFT_105177 [Volvox carteri f.
nagariensis]
gi|300262999|gb|EFJ47202.1| hypothetical protein VOLCADRAFT_105177 [Volvox carteri f.
nagariensis]
Length = 924
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
P ++ + + L + +L+RNV E H+REIFS +G + VEL MDRAVNLPRG +V
Sbjct: 35 KPAKEVGADGGATRLVVGNLTRNVTEDHIREIFSCYGVLKSVELAMDRAVNLPRGFAHVE 94
Query: 157 FKTRADAEKAQLYMD 171
+++ DAE+A +M+
Sbjct: 95 YESHEDAERALDFMN 109
>gi|291224590|ref|XP_002732284.1| PREDICTED: RNA-binding protein S1, serine-rich domain-like
[Saccoglossus kowalevskii]
Length = 261
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 42/62 (67%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L+I L+RNVN HL EIFS +G+V VEL +DR NL RG Y+ F+ DA+KA +M
Sbjct: 123 LHIGRLTRNVNRDHLLEIFSTYGKVKTVELQVDRMTNLSRGFAYIDFENHDDADKAMKHM 182
Query: 171 DG 172
DG
Sbjct: 183 DG 184
>gi|327292489|ref|XP_003230943.1| hypothetical protein TERG_08548 [Trichophyton rubrum CBS 118892]
gi|326466880|gb|EGD92333.1| hypothetical protein TERG_08548 [Trichophyton rubrum CBS 118892]
Length = 361
Score = 68.6 bits (166), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 50/85 (58%), Gaps = 13/85 (15%)
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
RSP PP++R S + ++ L++NVNE HLREIFS +GE+ +EL M+R
Sbjct: 136 RSPTPPARR-------------SAKIVVEKLTKNVNENHLREIFSAYGEIESLELPMNRQ 182
Query: 146 VNLPRGSGYVRFKTRADAEKAQLYM 170
RG+ Y+ ++ ADAE A +M
Sbjct: 183 FMTNRGAAYIHYRDPADAESAIAHM 207
>gi|406861320|gb|EKD14375.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 324
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 43/60 (71%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+ I+ L++NVNE HLREIF FG++ D+++ M+R+ N RG+ Y+ + + ADAE A +M
Sbjct: 103 VVIEKLTKNVNESHLREIFGTFGQIRDLDMPMNRSFNTNRGTAYILYTSEADAEAAIAHM 162
>gi|340383730|ref|XP_003390369.1| PREDICTED: hypothetical protein LOC100640053 [Amphimedon
queenslandica]
Length = 449
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/62 (48%), Positives = 43/62 (69%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+++ L+RNV + HL E+FSNFG+V +++L +DR LPRG GYV F T +A A +M
Sbjct: 313 VFVGKLTRNVTKPHLNEVFSNFGKVKNIDLPLDRLNFLPRGHGYVEFDTPDNATAAMKHM 372
Query: 171 DG 172
DG
Sbjct: 373 DG 374
>gi|170595296|ref|XP_001902324.1| Rnp [Brugia malayi]
gi|158590065|gb|EDP28832.1| Rnp, putative [Brugia malayi]
Length = 296
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 51/85 (60%), Gaps = 10/85 (11%)
Query: 89 APPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VN 147
A P ++A+ PPR+ L + +LSRNV + HL EIFS +G + EL MDR +
Sbjct: 144 ASPVRKATPPPRR---------LCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTH 194
Query: 148 LPRGSGYVRFKTRADAEKAQLYMDG 172
L RG GYV F+ DAEKA +MDG
Sbjct: 195 LGRGYGYVEFEQPEDAEKALKHMDG 219
>gi|326470306|gb|EGD94315.1| hypothetical protein TESG_01835 [Trichophyton tonsurans CBS 112818]
gi|326481145|gb|EGE05155.1| hypothetical protein TEQG_04172 [Trichophyton equinum CBS 127.97]
Length = 361
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 13/85 (15%)
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
RSP PP++R S + ++ L++NVNE HL EIFS +GE+ +EL M+R
Sbjct: 137 RSPTPPARR-------------SAKIVVEKLTKNVNENHLHEIFSAYGEIESLELPMNRQ 183
Query: 146 VNLPRGSGYVRFKTRADAEKAQLYM 170
RG+ Y+ ++ ADAE A +M
Sbjct: 184 FMTNRGAAYIHYRDPADAESAIAHM 208
>gi|241609358|ref|XP_002406762.1| RNA binding protein, putative [Ixodes scapularis]
gi|215502709|gb|EEC12203.1| RNA binding protein, putative [Ixodes scapularis]
Length = 226
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 18/128 (14%)
Query: 51 RSLSSSSSPSRST----NSRSRSPPPQRNK-SPAVAARRGRSPAPPSKRASSPPRKASTE 105
R ++ S P RS R ++ PP RN+ S + +A+R R KR+ SPPR
Sbjct: 58 RKSAAGSGPRRSAPPRQAVRGQAAPPGRNRPSRSESAQRARR-----KRSPSPPRPCK-- 110
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAE 164
+++ L+RNV HL EIF +G V VEL DR +L RG YV F+ ADAE
Sbjct: 111 -----IHVGRLTRNVTRDHLLEIFGCYGTVKGVELPPDRTHGHLSRGFAYVEFENPADAE 165
Query: 165 KAQLYMDG 172
+A +MDG
Sbjct: 166 RAMRHMDG 173
>gi|402593268|gb|EJW87195.1| hypothetical protein WUBG_01897 [Wuchereria bancrofti]
Length = 296
Score = 65.9 bits (159), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 10/83 (12%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLP 149
P ++A+ PPR+ L + +LSRNV + HL EIFS +G + EL MDR +L
Sbjct: 146 PVRKATPPPRR---------LCVRNLSRNVTKEHLSEIFSVYGALRSCELPMDRQHTHLG 196
Query: 150 RGSGYVRFKTRADAEKAQLYMDG 172
RG GYV F+ DAEKA +MDG
Sbjct: 197 RGYGYVEFEQPEDAEKALKHMDG 219
>gi|440634751|gb|ELR04670.1| hypothetical protein GMDG_01528 [Geomyces destructans 20631-21]
Length = 266
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 69/142 (48%), Gaps = 33/142 (23%)
Query: 45 RSLSRSRSLSSSSSPSRSTNSRSRSPPP----------------QRNKSPAVAARRGRSP 88
RSLSR R S SP R NSRS PPP RN RSP
Sbjct: 4 RSLSRGRERMRSLSP-RLDNSRS--PPPLHRRSISPRRSRPPSYDRNGGRRATRTISRSP 60
Query: 89 APPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNL 148
+P K S + ++ L++N+NE HLRE+F +FGE++D+++ M+R
Sbjct: 61 SPDVK--------------STKIVVERLTKNINENHLRELFGSFGEIIDMDMPMNRQFGT 106
Query: 149 PRGSGYVRFKTRADAEKAQLYM 170
RG+ Y+ + ADA++A +M
Sbjct: 107 NRGTAYLLYAVEADADQAIAHM 128
>gi|440793308|gb|ELR14495.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 310
Score = 65.1 bits (157), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ +L+RNVNE HLREIF +G+++ VEL DR ++ P+G YV + AD+ +A M
Sbjct: 84 LHVGNLTRNVNEEHLREIFGQWGKLLRVELGWDRRIDQPKGFAYVEYDKYADSVEALKRM 143
Query: 171 DG 172
DG
Sbjct: 144 DG 145
>gi|322701958|gb|EFY93706.1| hypothetical protein MAC_00197 [Metarhizium acridum CQMa 102]
Length = 312
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
Query: 69 SPPPQRN---KSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHL 125
+PPP+RN +S + RGR S+ AS P ST+ + ++ LS+N+NE HL
Sbjct: 44 TPPPRRNGRYRSDSQGWSRGRGRD--SREASESPLARSTK-----IVVERLSKNINEDHL 96
Query: 126 REIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
EIF FG + D++L M+R RG+ Y+ F ADAE A +M
Sbjct: 97 HEIFGQFGPIKDLDLPMNRTFGTNRGTAYILFDHEADAEAAISHM 141
>gi|325092199|gb|EGC45509.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 438
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 44 SRSLSRSRSLSSSSSPSRSTNSR-SRSPPPQ-RNKSPAVAARRGRSPAPPSKRASSPPRK 101
SRS +R R S SP R+ + SRSPPP+ R +S +++ RG SP R
Sbjct: 141 SRSRARLRDASPGMSPRRNGHRDGSRSPPPRNRTRSRSLSRGRGDRRYRDRSFTRSPSRG 200
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
S ++ ++ L++NVNE HLREIF +GE+ +EL M+ + RG+ Y+ + A
Sbjct: 201 TPPRTSSKIV-VEKLTKNVNENHLREIFGAYGEIQSLELPMNPQFMINRGTAYILYYEVA 259
Query: 162 DAEKAQLYM 170
DAE A +M
Sbjct: 260 DAEAAISHM 268
>gi|325180057|emb|CCA14459.1| PREDICTED: similar to AGAP009570PA putative [Albugo laibachii Nc14]
gi|325186695|emb|CCA21243.1| PREDICTED: RNAbinding protein S1 putative [Albugo laibachii Nc14]
Length = 377
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 14/118 (11%)
Query: 87 SPAPPSKRA-------SSPPRKASTENDS-----LVLYIDSLSRNVNEGHLREIFSNFGE 134
SP P +++ +S RK S +N S + + +++L+RNVN HL EIF+ FG
Sbjct: 51 SPQSPKQKSQSRSPSMASAERKESDKNISPTEKGIAVRVENLTRNVNTEHLTEIFAKFGS 110
Query: 135 VVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM-DGF-HRLQSLLQLLQREIVRE 190
V V+L+ +R + +GS + F T DAE A +M DG+ + ++QL+ ++V E
Sbjct: 111 VTKVKLMTERDTKISKGSAVIEFNTDQDAENAIQHMHDGWLDGRKIVVQLMTEDLVEE 168
>gi|240281305|gb|EER44808.1| conserved hypothetical protein [Ajellomyces capsulatus H143]
Length = 420
Score = 64.7 bits (156), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 44 SRSLSRSRSLSSSSSPSRSTNSR-SRSPPPQ-RNKSPAVAARRGRSPAPPSKRASSPPRK 101
SRS +R R S SP R+ + SRSPPP+ R +S +++ RG SP R
Sbjct: 123 SRSRARLRDASPGMSPRRNGHRDGSRSPPPRNRTRSRSLSRGRGDRRYRDRSFTRSPSRG 182
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
S ++ ++ L++NVNE HLREIF +GE+ +EL M+ + RG+ Y+ + A
Sbjct: 183 TPPRTSSKIV-VEKLTKNVNENHLREIFGAYGEIQSLELPMNPQFMINRGTAYILYYEVA 241
Query: 162 DAEKAQLYM 170
DAE A +M
Sbjct: 242 DAEAAISHM 250
>gi|296819599|ref|XP_002849873.1| SR45 [Arthroderma otae CBS 113480]
gi|238840326|gb|EEQ29988.1| SR45 [Arthroderma otae CBS 113480]
Length = 347
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 53/100 (53%), Gaps = 15/100 (15%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS 130
PP R++ + R SPAP S + ++ L++NVNE HLREIFS
Sbjct: 122 PPIRDRQRGRSYTRSPSPAP---------------RRSAKIVVEKLTKNVNENHLREIFS 166
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+GE+ +EL M+R RG+ Y+ ++ ADAE A +M
Sbjct: 167 AYGEIESLELPMNRQFMTNRGAAYIHYREPADAESAIAHM 206
>gi|440793313|gb|ELR14500.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 139
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/62 (46%), Positives = 43/62 (69%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ +L+RNVNE HLREIF +G+++ VEL DR ++ P+G YV + AD+ +A M
Sbjct: 78 LHVGNLTRNVNEEHLREIFGQWGKLLRVELGWDRRIDQPKGFAYVEYDKYADSVEALKRM 137
Query: 171 DG 172
DG
Sbjct: 138 DG 139
>gi|194744937|ref|XP_001954949.1| GF18529 [Drosophila ananassae]
gi|190627986|gb|EDV43510.1| GF18529 [Drosophila ananassae]
Length = 417
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
PR +N +L Y+ L NE +RE+F G+++D+ +++++A LP+G +VRF
Sbjct: 220 PRSEDIKNSNL--YVSHLPATTNESQIRELFGPHGQILDINILINKATGLPKGVAFVRFC 277
Query: 159 TRADAEKAQLYMDGF 173
+R AEKAQ +DG
Sbjct: 278 SRTSAEKAQKTLDGI 292
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
+PP + S + L I+ L +++ E L +IFS FG + +++ D + G G+V
Sbjct: 133 APPVQPSNRTN---LIINYLPQDMTEMELADIFSKFGHLRRHKIIRDLSTGFSFGYGFVD 189
Query: 157 FKTRADAEKAQLYMDG 172
F A+ AQ+ +DG
Sbjct: 190 FMDSRQAQVAQIILDG 205
>gi|315040519|ref|XP_003169637.1| hypothetical protein MGYG_08546 [Arthroderma gypseum CBS 118893]
gi|311346327|gb|EFR05530.1| hypothetical protein MGYG_08546 [Arthroderma gypseum CBS 118893]
Length = 365
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 13/85 (15%)
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
RSP P ++R S + ++ L++NVNE HLREIFS +GE+ +EL M+R
Sbjct: 135 RSPTPVARR-------------SAKIVVEKLTKNVNENHLREIFSAYGEIESLELPMNRQ 181
Query: 146 VNLPRGSGYVRFKTRADAEKAQLYM 170
RG+ Y+ ++ ADAE A +M
Sbjct: 182 FMTNRGAAYIHYREPADAESAIAHM 206
>gi|294881468|ref|XP_002769373.1| RNA-binding protein with serine-rich domain, putative [Perkinsus
marinus ATCC 50983]
gi|239872761|gb|EER02091.1| RNA-binding protein with serine-rich domain, putative [Perkinsus
marinus ATCC 50983]
Length = 240
Score = 63.5 bits (153), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 42/64 (65%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ +L++ +L+RN+NE HL EIF F EV+DV L +D VNLP+G ++ + A+ A
Sbjct: 35 TTILHVSNLTRNINEDHLYEIFGTFAEVIDVHLAIDDKVNLPKGYAHITLPNKEAAKDAI 94
Query: 168 LYMD 171
++D
Sbjct: 95 YHLD 98
>gi|347976363|ref|XP_003437511.1| unnamed protein product [Podospora anserina S mat+]
gi|170940369|emb|CAP65596.1| unnamed protein product [Podospora anserina S mat+]
Length = 338
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 42/63 (66%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ L++NVNE HLREIF +GE+ D++L ++R + RG+ Y+ F ADAE A
Sbjct: 110 STKIVVERLTKNVNEDHLREIFGQYGEIEDLDLPLNRQLGTNRGTAYILFYNEADAEAAI 169
Query: 168 LYM 170
+M
Sbjct: 170 AHM 172
>gi|388505224|gb|AFK40678.1| unknown [Lotus japonicus]
Length = 187
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS E LR F NFG++VDV LVMD+ N PRG ++R+ T +++KA +
Sbjct: 96 LYVSGLSFRTTEESLRNCFKNFGQLVDVNLVMDKLANRPRGFAFLRYATEEESQKA---I 152
Query: 171 DGFH 174
+G H
Sbjct: 153 EGMH 156
>gi|225555099|gb|EEH03392.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 436
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 71/129 (55%), Gaps = 3/129 (2%)
Query: 44 SRSLSRSRSLSSSSSPSRSTNSR-SRSPPPQ-RNKSPAVAARRGRSPAPPSKRASSPPRK 101
SRS +R R S SP R+ + SRSPPP+ R +S +++ RG +P R
Sbjct: 138 SRSRARLRDASPGLSPRRNGHRDGSRSPPPRNRTRSRSLSRGRGDRRYRDRSFTRNPSRG 197
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
S ++ ++ L++NVNE HLREIF +GE+ +EL M+ + RG+ Y+ + A
Sbjct: 198 TPPRTSSKIV-VEKLTKNVNENHLREIFGAYGEIQSLELPMNPQFMINRGTAYILYYEVA 256
Query: 162 DAEKAQLYM 170
DAE A +M
Sbjct: 257 DAEAAISHM 265
>gi|358396389|gb|EHK45770.1| hypothetical protein TRIATDRAFT_317908, partial [Trichoderma
atroviride IMI 206040]
Length = 312
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/154 (38%), Positives = 85/154 (55%), Gaps = 8/154 (5%)
Query: 20 SSRSRSRSYSGSDSRSSSRSLSSRSR--SLSRSRSLSSSSSPSRSTNSRSRSPPPQRN-K 76
+SRS SR Y S SR+ RS SRS + R R S S S S + SRS +PPP+RN +
Sbjct: 2 ASRSPSREYRRSLSRTPPRSNDSRSPPPAHRRRRYDSRSPSRSPRSRSRSFTPPPRRNGR 61
Query: 77 SPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVV 136
+ + R R S+ S P ST+ + ++ LS+N+NE HL EIF FG +
Sbjct: 62 HRSASGNRNRDRVRGSRSPSESPLAKSTK-----IVVERLSKNINEEHLYEIFGQFGHIK 116
Query: 137 DVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
D++L ++R+ RG+ Y+ + ADAE A +M
Sbjct: 117 DLDLPINRSFGTNRGTAYILYDHEADAEAAISHM 150
>gi|195999416|ref|XP_002109576.1| hypothetical protein TRIADDRAFT_9217 [Trichoplax adhaerens]
gi|190587700|gb|EDV27742.1| hypothetical protein TRIADDRAFT_9217, partial [Trichoplax
adhaerens]
Length = 74
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 27/62 (43%), Positives = 42/62 (67%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+++ L+RN + H++EIFSN+G+V +V++ DRA LPRG Y+ F+ AE A YM
Sbjct: 1 IHLGRLTRNATKDHVQEIFSNYGKVKNVDVPTDRANGLPRGFAYIEFENGKSAENAIKYM 60
Query: 171 DG 172
+G
Sbjct: 61 NG 62
>gi|351725889|ref|NP_001237108.1| uncharacterized protein LOC100305561 [Glycine max]
gi|255625921|gb|ACU13305.1| unknown [Glycine max]
Length = 180
Score = 62.4 bits (150), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 48/85 (56%), Gaps = 3/85 (3%)
Query: 90 PPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLP 149
PP SS K S + LY+ LS E LR F NFG++V+V+LVMDR N P
Sbjct: 69 PPESSTSSSTAKPSFPSPQTKLYVSGLSFRTTEESLRNAFKNFGQLVEVKLVMDRIANRP 128
Query: 150 RGSGYVRFKTRADAEKAQLYMDGFH 174
RG ++R+ T +++KA ++G H
Sbjct: 129 RGFAFLRYATEEESQKA---IEGMH 150
>gi|260817443|ref|XP_002603596.1| hypothetical protein BRAFLDRAFT_126915 [Branchiostoma floridae]
gi|229288916|gb|EEN59607.1| hypothetical protein BRAFLDRAFT_126915 [Branchiostoma floridae]
Length = 479
Score = 62.0 bits (149), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 14/127 (11%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
L++ L+RNVN+ HL EIF+ +G+V VEL +DR +L +G Y+ F+ DAEKA +
Sbjct: 294 LHVGRLTRNVNKDHLVEIFTVYGKVKTVELPVDRVNAHLSKGFAYIDFEEAEDAEKAMKH 353
Query: 170 MDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQENPLPVGSH--PPRHGG----DL 223
MDG Q+ +E+ +++ RR + P PPR GG +L
Sbjct: 354 MDGG-------QIDGQEVTAAMVLPARPRRRPSPPRRPPMPPRWGRPSPPRFGGARRRNL 406
Query: 224 LDLEEVD 230
LD EEV+
Sbjct: 407 LDAEEVE 413
>gi|347826863|emb|CCD42560.1| hypothetical protein [Botryotinia fuckeliana]
Length = 371
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + I+ L++NV E HLREIF +FGE+ D+++ M+R+ N RG+ Y+ + + + AE A
Sbjct: 139 STKVVIEKLTKNVTEDHLREIFGSFGEIKDLDVPMNRSFNTNRGTAYILYVSPSSAESAI 198
Query: 168 LYM 170
+M
Sbjct: 199 AHM 201
>gi|444707445|gb|ELW48720.1| U2 small nuclear ribonucleoprotein auxiliary factor 35 kDa
subunit-related protein 1 [Tupaia chinensis]
Length = 612
Score = 61.6 bits (148), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 84/157 (53%), Gaps = 27/157 (17%)
Query: 19 SSSRSRSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTN---SRSRSPPPQRN 75
S +S+ RS ++ SS+ R ++ R R+ SS SS +R N SRS+S PP+ +
Sbjct: 51 SDEKSKDRSKGKGATKESSKKDCGRDKTRKR-RNASSGSSSTRHDNGRHSRSKSKPPKGD 109
Query: 76 KSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGE 134
+ R+ +SP+P P+K ++I L+RNV + H+ E+FS +G+
Sbjct: 110 EK----ERKRQSPSPKPTK-----------------VHIGRLTRNVTKDHIMEVFSTYGK 148
Query: 135 VVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYM 170
+ +++ ++R +L +G YV F+ +AEKA +M
Sbjct: 149 IKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHM 185
>gi|384499197|gb|EIE89688.1| hypothetical protein RO3G_14399 [Rhizopus delemar RA 99-880]
Length = 276
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+ + +L+RNV E H++EIF FG++ ++ +D+ N+ G Y+ F+T+ DAEKA YM
Sbjct: 40 IVVSNLTRNVKEEHVKEIFEQFGKITYIKFPLDKEFNINLGKAYIDFETQEDAEKAISYM 99
>gi|328875106|gb|EGG23471.1| RNA recognition motif-containing protein RRM [Dictyostelium
fasciculatum]
Length = 439
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 61/115 (53%), Gaps = 13/115 (11%)
Query: 71 PPQRNKSPAVAAR-----RGRSPAPPSKR--------ASSPPRKASTENDSLVLYIDSLS 117
PP+ +SP+ +R R RSP+P R A R S E L +D L+
Sbjct: 254 PPRGGRSPSPMSRGRSPIRNRSPSPSGARNGENSNGQAMDKSRSRSREFSLSPLRVDRLT 313
Query: 118 RNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
NV++ +L EIFS FG+V DVE++ DR N P G YV F + + +A+ Y+DG
Sbjct: 314 PNVSKENLIEIFSTFGKVKDVEIMYDRKSNQPTGIAYVTFFIKDERNRAKKYLDG 368
>gi|297740319|emb|CBI30501.3| unnamed protein product [Vitis vinifera]
Length = 194
Score = 61.2 bits (147), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTE----NDSLVLYIDSLSRNVNEGHLR 126
P + + A + +G + PPS RA + R + T+ N+ + + +LS + +E LR
Sbjct: 73 PTASDPTAAASVTKG-AYVPPSMRAGAD-RSSGTDMRRRNEENAVRVSNLSEDTHEADLR 130
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQL 182
E+FS FG++ V + +D L RG GYV F R DAE+A ++G+ +LQ+
Sbjct: 131 ELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQV 186
>gi|302756381|ref|XP_002961614.1| hypothetical protein SELMODRAFT_403662 [Selaginella moellendorffii]
gi|300170273|gb|EFJ36874.1| hypothetical protein SELMODRAFT_403662 [Selaginella moellendorffii]
Length = 327
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 35/42 (83%)
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
N+G+++ V+L MD+ VNLP+G YV +K+++DAEKAQ +MDG
Sbjct: 12 NYGDIIAVDLAMDKTVNLPKGFAYVDYKSKSDAEKAQQFMDG 53
>gi|116781215|gb|ABK22008.1| unknown [Picea sitchensis]
Length = 140
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 41/62 (66%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ LS E L E FS FGEVV+V++VMDR +G G+V++ + ADAE+A+ M
Sbjct: 34 LFVGGLSFYTTEKALTEAFSRFGEVVEVKVVMDRVSQRSKGFGFVQYASEADAERAKAEM 93
Query: 171 DG 172
+G
Sbjct: 94 NG 95
>gi|147765735|emb|CAN73378.1| hypothetical protein VITISV_037535 [Vitis vinifera]
Length = 306
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTE----NDSLVLYIDSLSRNVNEGHLR 126
P + + A + +G + PPS RA + R + T+ N+ + + +LS + +E LR
Sbjct: 185 PTASDPTAAASVTKG-AYVPPSMRAGAD-RSSGTDMRRRNEENAVRVSNLSEDTHEADLR 242
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQL 182
E+FS FG++ V + +D L RG GYV F R DAE+A ++G+ +LQ+
Sbjct: 243 ELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQV 298
>gi|225440472|ref|XP_002272361.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
isoform 1 [Vitis vinifera]
Length = 293
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTE----NDSLVLYIDSLSRNVNEGHLR 126
P + + A + +G + PPS RA + R + T+ N+ + + +LS + +E LR
Sbjct: 172 PTASDPTAAASVTKG-AYVPPSMRAGAD-RSSGTDMRRRNEENAVRVSNLSEDTHEADLR 229
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQL 182
E+FS FG++ V + +D L RG GYV F R DAE+A ++G+ +LQ+
Sbjct: 230 ELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQV 285
>gi|359481742|ref|XP_003632667.1| PREDICTED: eukaryotic translation initiation factor 3 subunit G
isoform 2 [Vitis vinifera]
Length = 286
Score = 60.8 bits (146), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTE----NDSLVLYIDSLSRNVNEGHLR 126
P + + A + +G + PPS RA + R + T+ N+ + + +LS + +E LR
Sbjct: 165 PTASDPTAAASVTKG-AYVPPSMRAGAD-RSSGTDMRRRNEENAVRVSNLSEDTHEADLR 222
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQL 182
E+FS FG++ V + +D L RG GYV F R DAE+A ++G+ +LQ+
Sbjct: 223 ELFSRFGQLTRVYVAIDHKTGLSRGFGYVNFVNREDAERAISKLNGYGYDSLILQV 278
>gi|336257630|ref|XP_003343641.1| hypothetical protein SMAC_09592 [Sordaria macrospora k-hell]
gi|380086872|emb|CCC05572.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 336
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 41/63 (65%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ L++N+NE HLREIF FGE+ D++L ++R RG+ Y+ + ADAE A
Sbjct: 105 STKIVVERLTKNINENHLREIFGQFGEIEDLDLPLNRTSRTNRGTAYILYVHDADAEAAI 164
Query: 168 LYM 170
+M
Sbjct: 165 AHM 167
>gi|269316189|ref|XP_636445.5| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
gi|165988511|gb|EAL62942.2| RNA recognition motif-containing protein RRM [Dictyostelium
discoideum AX4]
Length = 512
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 113 IDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+D L+ NVN+ HL+EIF NFG + D++ + D+ ++ P G + F + + +KA+ YMDG
Sbjct: 252 VDRLTPNVNKDHLQEIFENFGSIKDIDFLWDKEIDQPMGYALLYFHQKDERDKAKRYMDG 311
>gi|224120444|ref|XP_002318331.1| predicted protein [Populus trichocarpa]
gi|222859004|gb|EEE96551.1| predicted protein [Populus trichocarpa]
Length = 181
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS E LR F NFG++VDV LVMD+ PRG ++R++T +A+KA +
Sbjct: 92 LYVSGLSFRTTEESLRNAFQNFGQLVDVNLVMDKVAKRPRGFAFLRYETEEEAQKA---I 148
Query: 171 DGFH 174
+G H
Sbjct: 149 EGMH 152
>gi|443897539|dbj|GAC74879.1| translation initiation factor 3, subunit g [Pseudozyma antarctica
T-34]
Length = 308
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 77 SPAVAARRGRSPAPPSKR--ASSPPRKAS-----TENDSLVLYIDSLSRNVNEGHLREIF 129
+PAVAA G PPS R A P K + +D L + +LS + ++ LRE+F
Sbjct: 186 NPAVAASTGGKYIPPSMRGGAKGPGEKMGGLGGVSRDDLPTLRVTNLSEDADDDDLRELF 245
Query: 130 SNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
FG VV V + DR + +G +V F+TR DA++A+ +DG
Sbjct: 246 GRFGRVVRVYVGRDRETGICKGYAFVSFETREDADRARQKVDG 288
>gi|357126492|ref|XP_003564921.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial-like
[Brachypodium distachyon]
Length = 156
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 37/62 (59%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ LS N+G L+E FS+FGEV + ++ DR RG G+V F DA+KA M
Sbjct: 39 LFVGGLSWGTNDGSLKEAFSSFGEVYEARVITDRETGRSRGFGFVEFSNEEDAKKAASSM 98
Query: 171 DG 172
DG
Sbjct: 99 DG 100
>gi|327287565|ref|XP_003228499.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Anolis carolinensis]
Length = 245
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K +YI L+RNV + H+
Sbjct: 140 KSKPPKRDE----KERKRRSPSPKPTK-----------------VYIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ DR +L +G YV F+ DAEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPADRLNSHLSKGYAYVEFENPNDAEKALKHMDG 225
>gi|294896987|ref|XP_002775782.1| ribonucleic acid binding protein S1, putative [Perkinsus marinus
ATCC 50983]
gi|239882104|gb|EER07598.1| ribonucleic acid binding protein S1, putative [Perkinsus marinus
ATCC 50983]
Length = 118
Score = 60.1 bits (144), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+L++ +L+RN+NE HL EIF F EV+DV L +D VNLP+G ++ + A+ A
Sbjct: 1 MLHVSNLTRNINEDHLYEIFGTFAEVIDVHLAIDDKVNLPKGYAHITLPNKEAAKDA 57
>gi|255578005|ref|XP_002529874.1| Eukaryotic translation initiation factor 3 subunit, putative
[Ricinus communis]
gi|223530650|gb|EEF32524.1| Eukaryotic translation initiation factor 3 subunit, putative
[Ricinus communis]
Length = 307
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 5/109 (4%)
Query: 70 PPPQRNKSPAVAARRGRSPAPPSKRA-----SSPPRKASTENDSLVLYIDSLSRNVNEGH 124
PP N + + PPS RA S+ ND + + +S N +E
Sbjct: 173 PPSADNSAASSITAMNSKYIPPSMRAGAQRSSNDKFNMKRRNDENTVRVSCISENTSEAD 232
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
L ++FS FG+V V L+ DR L RGSG+V F + DAE+A +DG+
Sbjct: 233 LVDLFSPFGQVSRVFLLTDRHTGLNRGSGFVSFVNKEDAERAINKLDGY 281
>gi|3152586|gb|AAC17067.1| YUP8H12R.28 [Arabidopsis thaliana]
Length = 180
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/43 (62%), Positives = 33/43 (76%), Gaps = 1/43 (2%)
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTR-ADAEKAQLYMDG 172
+FGE++ V+L +DRA NL RG YV FK + ADAEK QLYMDG
Sbjct: 65 DFGEIIHVQLAIDRAANLSRGDAYVEFKAKIADAEKPQLYMDG 107
>gi|195111486|ref|XP_002000309.1| GI10157 [Drosophila mojavensis]
gi|193916903|gb|EDW15770.1| GI10157 [Drosophila mojavensis]
Length = 356
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 100 RKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
R +S + +Y+ +L + + +REIF FG++VD+ L+ DR N RG+ +VR++
Sbjct: 108 RPSSDDTKKTNIYVGNLPLSYDAAQVREIFERFGKIVDLNLLKDRYTNQSRGTAFVRYEM 167
Query: 160 RADAEKAQLYMDGF 173
RA EKA L ++ F
Sbjct: 168 RASVEKAILALNDF 181
>gi|324510588|gb|ADY44428.1| RNA-binding protein with serine-rich domain 1-B [Ascaris suum]
Length = 361
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 48/83 (57%), Gaps = 8/83 (9%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
L + +LSRNV + HL EIF +G + E+ MDR +L RG GYV F++ DA+KA +
Sbjct: 220 LCVRNLSRNVTKEHLAEIFGVYGALKSCEMPMDRQHTHLGRGYGYVEFESADDADKALKH 279
Query: 170 MDGFHRLQSLLQLLQREIVRELI 192
MDG Q+ +EI EL
Sbjct: 280 MDGG-------QIDGQEITCELT 295
>gi|396471523|ref|XP_003838892.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
gi|312215461|emb|CBX95413.1| hypothetical protein LEMA_P025650.1 [Leptosphaeria maculans JN3]
Length = 490
Score = 59.7 bits (143), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ +LS N++E LR F FGE+V ++ DR +G GYV F T ADA KAQ M
Sbjct: 236 LFVGNLSWNIDEDWLRREFEGFGEIVGCRIITDRETGRGKGFGYVEFATSADAAKAQAEM 295
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS + ++EIF+ +G + V L DR +G GYV F ++ +A A
Sbjct: 336 SNTLFLGNLSFDCTNDSIQEIFAEYGNITRVSLPTDRDTGSIKGFGYVDFGSQEEATAAL 395
Query: 168 LYMDG 172
++G
Sbjct: 396 DALNG 400
>gi|402078039|gb|EJT73388.1| nuclear localization sequence binding protein [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 499
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 52/99 (52%), Gaps = 9/99 (9%)
Query: 83 RRGRSPAPPSKRASSPPRKAST--------ENDS-LVLYIDSLSRNVNEGHLREIFSNFG 133
+ ++ AP KR + P++A T E+D L++ SLS NV++ L+E F G
Sbjct: 218 KETKAEAPSKKRKADEPKEAPTKKSKTDAAESDKPATLFVGSLSWNVDDDMLKEEFKFCG 277
Query: 134 EVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EVV ++ DR +G GYV F + ADAEKA G
Sbjct: 278 EVVSARVITDRETGRSKGFGYVDFASPADAEKAHAEKQG 316
>gi|221129434|ref|XP_002154673.1| PREDICTED: uncharacterized protein LOC100214307 [Hydra
magnipapillata]
Length = 517
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ L + +L+RNVN+ H+ EIFS +G V ++L +D LPRG YV F DA+ A
Sbjct: 346 VKLCVSNLTRNVNKDHILEIFSVYGRVRSIDLPLDTKNYLPRGHAYVEFDKTDDAKDAIK 405
Query: 169 YMDG 172
+MDG
Sbjct: 406 HMDG 409
>gi|15219291|ref|NP_178031.1| putative arginine/serine-rich protein [Arabidopsis thaliana]
gi|332198083|gb|AEE36204.1| putative arginine/serine-rich protein [Arabidopsis thaliana]
Length = 70
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 123 GHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTR-ADAEKAQLYMDG 172
+R +FGE++ V+L +DRA NL RG YV FK + ADAEK QLYMDG
Sbjct: 2 AKIRVFRGDFGEIIHVQLAIDRAANLSRGDAYVEFKAKIADAEKPQLYMDG 52
>gi|302918553|ref|XP_003052681.1| hypothetical protein NECHADRAFT_77914 [Nectria haematococca mpVI
77-13-4]
gi|256733621|gb|EEU46968.1| hypothetical protein NECHADRAFT_77914 [Nectria haematococca mpVI
77-13-4]
Length = 310
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/159 (33%), Positives = 74/159 (46%), Gaps = 39/159 (24%)
Query: 40 LSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQR-----NKSPAVAARRGRSPAPPSKR 94
++SRS S R RS + S +P RS SRS PQR ++SP RSP+PP +
Sbjct: 1 MASRSPSRGRYRSRTRSPTP-RSEYSRS----PQRRPRHDSRSPV------RSPSPPRRN 49
Query: 95 A-----------------------SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSN 131
S R S S + ++ LS+N+NE HL EIF
Sbjct: 50 GRYRSRSRSRSWSRGRDRDRGRDRSERGRSGSPLAKSTKIVVERLSKNINEQHLYEIFGQ 109
Query: 132 FGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
FG + D++L ++R RG+ Y+ F ADAE A +M
Sbjct: 110 FGRIRDLDLPINRTFGTNRGTAYILFDYEADAEAAIAHM 148
>gi|225464267|ref|XP_002271224.1| PREDICTED: cold-inducible RNA-binding protein [Vitis vinifera]
gi|296088019|emb|CBI35302.3| unnamed protein product [Vitis vinifera]
Length = 170
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 39/64 (60%), Gaps = 3/64 (4%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS E LR F FG++V+V LVMD+ N PRG ++R+ T ++EKA +
Sbjct: 81 LYVSGLSFRTTEESLRNAFETFGQLVEVNLVMDKIANRPRGFAFLRYSTEEESEKA---I 137
Query: 171 DGFH 174
+G H
Sbjct: 138 EGMH 141
>gi|145248586|ref|XP_001400632.1| hypothetical protein ANI_1_6124 [Aspergillus niger CBS 513.88]
gi|134081299|emb|CAK41802.1| unnamed protein product [Aspergillus niger]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 55/99 (55%), Gaps = 5/99 (5%)
Query: 72 PQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSN 131
P R++S + RR R K S P ++ + S + I+ L++NV E HLREIF
Sbjct: 72 PSRSRSRSETPRRYRK-----KDYSRTPSPSADASRSSKIVIEKLTKNVTESHLREIFGG 126
Query: 132 FGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
FG++ ++L M++A RG+ Y+ + ADAE A +M
Sbjct: 127 FGDIQSLDLPMNKAFMTNRGTAYILYHDPADAEAAIAHM 165
>gi|147775526|emb|CAN64942.1| hypothetical protein VITISV_043976 [Vitis vinifera]
Length = 311
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 64/133 (48%), Gaps = 17/133 (12%)
Query: 67 SRSP-----PPQRNKSPAVAARRGRSPAP-PSKRASSPP-------RKASTE----NDSL 109
SRSP PP A G + A PSK PP R + T+ N+
Sbjct: 157 SRSPYKDLAPPSEGFIDKPAVSEGTATASGPSKGTYVPPGMRADADRSSGTDIRRMNEEN 216
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
V+ + +LS + +E LRE+FS FG + V + +D L RG GYV F + DAE+A
Sbjct: 217 VIQVRNLSEDTHEADLRELFSRFGPLTRVYVAIDHKFGLSRGFGYVYFVNKEDAERAINK 276
Query: 170 MDGFHRLQSLLQL 182
++GF +LQ+
Sbjct: 277 LNGFGYDSLILQV 289
>gi|406696910|gb|EKD00181.1| nucleus protein [Trichosporon asahii var. asahii CBS 8904]
Length = 1197
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 59/112 (52%), Gaps = 14/112 (12%)
Query: 61 RSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNV 120
RS + ++ +P P+RN A+ SP PS S+ + S V+ ID L++NV
Sbjct: 6 RSRSPKALTPSPRRNGDVAM------SPRAPSAGGSA--------SGSRVIVIDGLTKNV 51
Query: 121 NEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ GHLREIF ++G V ++L + + L RG + F AE+A MDG
Sbjct: 52 HPGHLREIFGSYGRVTGLDLPVFKVSGLNRGKAALEFDRPNQAEEAVRCMDG 103
>gi|156395189|ref|XP_001636994.1| predicted protein [Nematostella vectensis]
gi|156224102|gb|EDO44931.1| predicted protein [Nematostella vectensis]
Length = 86
Score = 58.9 bits (141), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/62 (48%), Positives = 40/62 (64%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ L+RNVN+ H++EIFS +G V V+L DR NL RG YV + + EKA +M
Sbjct: 3 LYVAHLTRNVNKDHVQEIFSVYGRVKTVDLPTDRTNNLSRGFAYVEYVDPEECEKALKHM 62
Query: 171 DG 172
DG
Sbjct: 63 DG 64
>gi|226469234|emb|CAX70096.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 327
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
A + R A PS PR + + LYI SL N+ E L+ IF FG++ D++L+
Sbjct: 45 AEKNRVSATPSL-----PRPSQQNKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLI 99
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D A N +G G+V + DA+KA ++GF
Sbjct: 100 KDPATNRSQGYGFVTYVNSDDAKKALDQLNGF 131
>gi|154303874|ref|XP_001552343.1| hypothetical protein BC1G_08821 [Botryotinia fuckeliana B05.10]
Length = 245
Score = 58.9 bits (141), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+ I+ L++NV E HLREIF +FGE+ D+++ M+R+ N RG+ Y+ + + + AE A +M
Sbjct: 16 VVIEKLTKNVTEDHLREIFGSFGEIKDLDVPMNRSFNTNRGTAYILYVSPSSAESAIAHM 75
>gi|343959502|dbj|BAK63608.1| RNA-binding protein with serine-rich domain 1 [Pan troglodytes]
Length = 305
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 63/110 (57%), Gaps = 23/110 (20%)
Query: 65 SRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEG 123
SRS+S PP+R++ R+ RSP+P P+K ++I L+RNV +
Sbjct: 137 SRSKSKPPKRDE----KERKRRSPSPKPTK-----------------VHIGRLTRNVTKD 175
Query: 124 HLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
H+ EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 176 HIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|449439247|ref|XP_004137398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like-B-like
[Cucumis sativus]
Length = 170
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LYI LS E LR F +FG++V+V LVMDR N PRG ++R+ + +++KA +
Sbjct: 91 LYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA---I 147
Query: 171 DGFH 174
+G H
Sbjct: 148 EGMH 151
>gi|194744735|ref|XP_001954848.1| GF18475 [Drosophila ananassae]
gi|190627885|gb|EDV43409.1| GF18475 [Drosophila ananassae]
Length = 386
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FGEV VE DR N RG YV + T D E A +
Sbjct: 236 IHVGRLTRNVTKDHVFEIFSSFGEVKTVEFPTDRNHPNFGRGMAYVEYSTSDDCESAMKH 295
Query: 170 MDG 172
MDG
Sbjct: 296 MDG 298
>gi|343425033|emb|CBQ68570.1| related to TIF35-translation initiation factor eIF3 subunit
[Sporisorium reilianum SRZ2]
Length = 308
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 56/103 (54%), Gaps = 7/103 (6%)
Query: 77 SPAVAARRGRSPAPPSKR--ASSPPRKAS-----TENDSLVLYIDSLSRNVNEGHLREIF 129
+PAVAA G PPS R A P K + +D L + +LS + ++ LRE+F
Sbjct: 186 NPAVAASAGGKYVPPSMRGGAKGPGEKMGGLGGMSRDDLPTLRVTNLSEDADDDDLRELF 245
Query: 130 SNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+FG VV V + DR + +G +V F+ R DA++A+ +DG
Sbjct: 246 MHFGRVVRVYVGRDRETGICKGYAFVSFENREDADRARQKVDG 288
>gi|116194055|ref|XP_001222840.1| hypothetical protein CHGG_06745 [Chaetomium globosum CBS 148.51]
gi|88182658|gb|EAQ90126.1| hypothetical protein CHGG_06745 [Chaetomium globosum CBS 148.51]
Length = 313
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 41/61 (67%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
V+ ++ L++NVNE HL EIF +G + D++L ++R + RG+ Y+ + T ADA+ A +
Sbjct: 102 VIVVERLTKNVNEDHLYEIFGQYGSIDDLDLPVNRQSGMNRGTAYILYYTEADAQAAITH 161
Query: 170 M 170
M
Sbjct: 162 M 162
>gi|156040784|ref|XP_001587378.1| hypothetical protein SS1G_11370 [Sclerotinia sclerotiorum 1980]
gi|154695754|gb|EDN95492.1| hypothetical protein SS1G_11370 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 338
Score = 58.5 bits (140), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + I+ L++NV E HLREIF ++GE+ D+++ M+R+ N RG+ Y+ + + AE A
Sbjct: 104 STKVVIEKLTKNVTEDHLREIFGSYGEIKDLDVPMNRSFNTNRGTAYILYVSAESAESAI 163
Query: 168 LYM 170
+M
Sbjct: 164 AHM 166
>gi|294946599|ref|XP_002785125.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239898581|gb|EER16921.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 114
Score = 58.2 bits (139), Expect = 6e-06, Method: Composition-based stats.
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
ND + +D + V + LRE FS FGE+ DV + +DR + RG G+VRF R DAE
Sbjct: 7 NDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAED 66
Query: 166 AQLYMD 171
A MD
Sbjct: 67 AIRDMD 72
>gi|71019737|ref|XP_760099.1| hypothetical protein UM03952.1 [Ustilago maydis 521]
gi|74701184|sp|Q4P7G1.1|EIF3G_USTMA RecName: Full=Eukaryotic translation initiation factor 3 subunit G;
Short=eIF3g; AltName: Full=Eukaryotic translation
initiation factor 3 RNA-binding subunit; Short=eIF-3
RNA-binding subunit; AltName: Full=Translation
initiation factor eIF3 p33 subunit homolog; Short=eIF3
p33 homolog
gi|46099864|gb|EAK85097.1| hypothetical protein UM03952.1 [Ustilago maydis 521]
Length = 308
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 77 SPAVAARRGRSPAPPSKR--ASSPPRKAS-----TENDSLVLYIDSLSRNVNEGHLREIF 129
+PAVAA G PPS R A P K + +D L + +LS + ++ LRE+F
Sbjct: 186 NPAVAASAGGKYVPPSMRGGAKGPGEKMGGLGGMSRDDLPTLRVTNLSEDADDDDLRELF 245
Query: 130 SNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
FG VV V + DR + +G +V F+ R DA++A+ +DG
Sbjct: 246 MRFGRVVRVYVGRDRETGICKGYAFVSFENREDADRARQKVDG 288
>gi|85089585|ref|XP_958016.1| hypothetical protein NCU09901 [Neurospora crassa OR74A]
gi|28919323|gb|EAA28780.1| predicted protein [Neurospora crassa OR74A]
Length = 331
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ L++N+NE HLREIF FGE+ D++L ++R RG+ Y+ + A AE A
Sbjct: 108 STKIVVERLTKNINENHLREIFGQFGEIEDLDLPLNRTSRTNRGTAYILYVHEAGAEAAI 167
Query: 168 LYM 170
+M
Sbjct: 168 AHM 170
>gi|449507141|ref|XP_004162944.1| PREDICTED: 40S ribosomal protein S19, mitochondrial-like [Cucumis
sativus]
Length = 175
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LYI LS E LR F +FG++V+V LVMDR N PRG ++R+ + +++KA +
Sbjct: 91 LYISGLSFRTTEESLRNAFKSFGQLVEVNLVMDRLANRPRGFAFLRYASEEESQKA---I 147
Query: 171 DGFH 174
+G H
Sbjct: 148 EGMH 151
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 5/92 (5%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
A + R A PS PR + + LYI SL N+ E L+ IF FG++ D++L+
Sbjct: 181 AEKNRVSATPSL-----PRPSQQNKGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLI 235
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D A N +G G+V + DA+KA ++GF
Sbjct: 236 KDPATNRSQGYGFVTYVNSDDAKKALDQLNGF 267
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 92 SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
++R P + E D+ +++ LS + + L + F++ G++ DV L+MD +G
Sbjct: 87 TERRQKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKG 146
Query: 152 SGYVRFKTRADAEKAQL 168
YV F+ + E AQL
Sbjct: 147 IAYVEFR---EVESAQL 160
>gi|396490029|ref|XP_003843237.1| hypothetical protein LEMA_P073470.1 [Leptosphaeria maculans JN3]
gi|312219816|emb|CBX99758.1| hypothetical protein LEMA_P073470.1 [Leptosphaeria maculans JN3]
Length = 357
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
PR AS S + +++L+RNV E H+REIF +G + D+++ M+ N+ RG Y+ ++
Sbjct: 92 PRDASPAPRSAKIVVEALTRNVKEDHVREIFGKYGIIKDLKMPMNPTFNINRGIAYILYE 151
Query: 159 TRADAEKAQLYM 170
DAE+A M
Sbjct: 152 EIDDAERAIAKM 163
>gi|336463086|gb|EGO51326.1| hypothetical protein NEUTE1DRAFT_125078 [Neurospora tetrasperma
FGSC 2508]
gi|350297733|gb|EGZ78710.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 331
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 40/63 (63%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ L++N+NE HLREIF FGE+ D++L ++R RG+ Y+ + A AE A
Sbjct: 108 STKIVVERLTKNINENHLREIFGQFGEIEDLDLPLNRTSRTNRGTAYILYVHEAGAEAAI 167
Query: 168 LYM 170
+M
Sbjct: 168 AHM 170
>gi|73987338|ref|XP_868602.1| PREDICTED: cold-inducible RNA-binding protein isoform 4 [Canis
lupus familiaris]
Length = 219
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 84 RGRSPAPPSKRASSPPR--KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
RG SP P SS KA+ +D L++ LS + NE L ++FS +G++ +V +V
Sbjct: 26 RGASPGGPVTPESSQAHHGKATMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVV 85
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
DR RG G+V F+ DA+ A + M+G
Sbjct: 86 KDRETQRSRGFGFVTFENIDDAKDAMMAMNG 116
>gi|410343221|gb|JAA40557.1| cold inducible RNA binding protein [Pan troglodytes]
Length = 203
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%)
Query: 88 PAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN 147
P+ P R S KA+ +D L++ LS + NE L ++FS +G++ +V +V DR
Sbjct: 16 PSLPDSRPRSCLWKAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVVVVKDRETQ 75
Query: 148 LPRGSGYVRFKTRADAEKAQLYMDG 172
RG G+V F+ DA+ A + M+G
Sbjct: 76 RSRGFGFVTFENIDDAKDAMMAMNG 100
>gi|310797661|gb|EFQ32554.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 307
Score = 58.2 bits (139), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 41/63 (65%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ L++N+NE HL EIF +G + D++L ++R RG+ Y+ ++T DAE+A
Sbjct: 69 SPAIVVERLTKNINEDHLEEIFGQYGRIKDLDLPINRTHGTNRGTAYILYETEGDAEEAI 128
Query: 168 LYM 170
+M
Sbjct: 129 AHM 131
>gi|157108428|ref|XP_001650224.1| splicing factor [Aedes aegypti]
gi|108879330|gb|EAT43555.1| AAEL005046-PA [Aedes aegypti]
Length = 544
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 10/87 (11%)
Query: 88 PAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN 147
P PP K S P R LY+ SL N+ E LR IF FG++ +++L+MD
Sbjct: 276 PQPPPKVTSGPMR----------LYVGSLHFNITEDMLRGIFEPFGKIDNIQLIMDSDTG 325
Query: 148 LPRGSGYVRFKTRADAEKAQLYMDGFH 174
+G G++ F DA+KA ++GF
Sbjct: 326 RSKGYGFITFHNADDAKKALEQLNGFE 352
>gi|391868515|gb|EIT77729.1| hypothetical protein Ao3042_05991 [Aspergillus oryzae 3.042]
Length = 324
Score = 57.8 bits (138), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ L++NV E HLREIF +FG + ++L M++A RG+ Y+ F ADAE A
Sbjct: 109 SSKIVVEKLTKNVTESHLREIFGSFGGIESLDLPMNKAFMTNRGTAYILFNDPADAEAAI 168
Query: 168 LYM 170
+M
Sbjct: 169 AHM 171
>gi|195395468|ref|XP_002056358.1| GJ10904 [Drosophila virilis]
gi|194143067|gb|EDW59470.1| GJ10904 [Drosophila virilis]
Length = 388
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FG V +VE DR N RG YV + T D E A +
Sbjct: 237 IHVGRLTRNVTKDHVLEIFSSFGTVKNVEFPTDRYHPNFGRGMAYVEYATAEDCESAMKH 296
Query: 170 MDG 172
MDG
Sbjct: 297 MDG 299
>gi|320033056|gb|EFW15005.1| hypothetical protein CPSG_08193 [Coccidioides posadasii str.
Silveira]
Length = 322
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+ ++ L++NVNE HLREIF +G++ ++L M+R RG+ Y+ + ADAE A +M
Sbjct: 125 IVVEKLTKNVNEDHLREIFGAYGDIQSIDLPMNRQFMTNRGTAYICYYDAADAESAIAHM 184
>gi|402075304|gb|EJT70775.1| hypothetical protein GGTG_11798 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 345
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+ ++ L++NVNE HL+EIF +G++VD++L ++R + RG+ Y+ + DAE A +M
Sbjct: 102 IVVERLTKNVNEDHLQEIFGTYGQIVDLDLPVNRQLGTNRGTAYILYAREPDAEAAIAHM 161
>gi|401881189|gb|EJT45492.1| RNA binding protein [Trichosporon asahii var. asahii CBS 2479]
Length = 300
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 61 RSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNV 120
RS + ++ +P P+RN A+ SP PS S+ + S V+ ID L++NV
Sbjct: 6 RSRSPKALTPSPRRNGDVAM------SPRAPSAGGSA--------SGSRVIVIDGLTKNV 51
Query: 121 NEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ GHLREIF +G V ++L + + L RG + F AE+A MDG
Sbjct: 52 HPGHLREIFGFYGRVTGLDLPVFKVSGLNRGKAALEFDRPNQAEEAVRCMDG 103
>gi|402903547|ref|XP_003914625.1| PREDICTED: cold-inducible RNA-binding protein [Papio anubis]
Length = 199
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 52/93 (55%), Gaps = 4/93 (4%)
Query: 84 RGRSPAPPSKRAS----SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVE 139
+G P S R+S +P +A+ +D L++ LS + NE L ++FS +G++ +V
Sbjct: 4 QGGGETPGSHRSSQTQVTPEAQAAMASDEGKLFVGGLSFDTNEQSLEQVFSKYGQISEVV 63
Query: 140 LVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+V DR RG G+V F+ DA+ A + M+G
Sbjct: 64 VVKDRETQRSRGFGFVTFENIDDAKDAMMAMNG 96
>gi|296425657|ref|XP_002842356.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638621|emb|CAZ86547.1| unnamed protein product [Tuber melanosporum]
Length = 898
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 68/137 (49%), Gaps = 28/137 (20%)
Query: 42 SRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRK 101
SR+RSLSR RS S S+SP R S SR+ S ++ R + +P S R+ SP +
Sbjct: 4 SRTRSLSRGRSPSRSNSPPRGGRSYSRN-------SRSITRSRSGTRSPVSNRSRSPTQS 56
Query: 102 ---------------------ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVEL 140
AS E S + I+ L++NV E H+ EIFS++GE+ +++
Sbjct: 57 PVSRARSRSRSGSRGRSYSRSASPEIQSTKIVIEKLTKNVTEAHISEIFSSYGEIKMLDM 116
Query: 141 VMDRAVNLPRGSGYVRF 157
++ N RG YV +
Sbjct: 117 PLNHQYNTNRGVCYVIY 133
>gi|195108129|ref|XP_001998645.1| GI24086 [Drosophila mojavensis]
gi|193915239|gb|EDW14106.1| GI24086 [Drosophila mojavensis]
Length = 382
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FG + +VE DR N RG YV + T D E A +
Sbjct: 229 IHVGRLTRNVTKDHVMEIFSSFGTIKNVEFPTDRYHPNFGRGMAYVEYATAEDCESAMKH 288
Query: 170 MDG 172
MDG
Sbjct: 289 MDG 291
>gi|297834182|ref|XP_002884973.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
gi|297330813|gb|EFH61232.1| hypothetical protein ARALYDRAFT_478747 [Arabidopsis lyrata subsp.
lyrata]
Length = 262
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 63/131 (48%), Gaps = 5/131 (3%)
Query: 78 PAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVD 137
P RRGRSP+P + S R T L + +L + + LR F FG V D
Sbjct: 11 PRGYGRRGRSPSPRGRYGGSRDRDLPTS-----LLVRNLRHDCRQEDLRRPFEQFGPVKD 65
Query: 138 VELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVLI 197
+ L D PRG G++++ ADA +A+ +MDG H L L ++ E R+ +
Sbjct: 66 IYLPRDYYTGDPRGFGFIQYVDPADAAEAKHHMDGSHLLGRELTVVFAEENRKKPTEMRT 125
Query: 198 LRRMGQNDQEN 208
R G++++ N
Sbjct: 126 RDRGGRSNRFN 136
>gi|449475372|ref|XP_002190325.2| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Taeniopygia guttata]
Length = 284
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K +++ L+RNV + H+
Sbjct: 117 KSKPPKRDEK----ERKRRSPSPRPTK-----------------VHVGRLTRNVTKDHIM 155
Query: 127 EIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ +DR +L +G YV F+ DAEKA +MDG
Sbjct: 156 EIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKHMDG 202
>gi|193620317|ref|XP_001945375.1| PREDICTED: hypothetical protein LOC100159253 isoform 1
[Acyrthosiphon pisum]
gi|328716903|ref|XP_003246070.1| PREDICTED: hypothetical protein LOC100159253 isoform 2
[Acyrthosiphon pisum]
Length = 317
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 42/62 (67%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+++ L+RN+ + H++EIFS+FG + +V++ +DR L +G Y+ + + +AE A +M
Sbjct: 162 IHVGRLTRNITKEHIQEIFSDFGTIKEVDVPLDRFNKLCKGFSYIEYSSPEEAENAMKHM 221
Query: 171 DG 172
DG
Sbjct: 222 DG 223
>gi|296422065|ref|XP_002840583.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636802|emb|CAZ84774.1| unnamed protein product [Tuber melanosporum]
Length = 559
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
+S + + L++ SLS NV+EG LR F FGE+ V +V DR +G GYV + T
Sbjct: 295 SSAQEGAKNLFVGSLSWNVDEGWLRNEFEQFGEIAAVRVVTDRESGRSKGFGYVEYTTNE 354
Query: 162 DAEKAQLYMDG 172
A+KA M G
Sbjct: 355 AAKKALEEMKG 365
>gi|330928516|ref|XP_003302299.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
gi|311322459|gb|EFQ89618.1| hypothetical protein PTT_14050 [Pyrenophora teres f. teres 0-1]
Length = 403
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ ++S N++E LR F FGE+V ++ DR +G GYV F ADA KAQ M
Sbjct: 219 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFSNAADAAKAQKEM 278
>gi|340960339|gb|EGS21520.1| eukaryotic translation initiation factor 3 subunit-like protein
[Chaetomium thermophilum var. thermophilum DSM 1495]
Length = 289
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 44/90 (48%), Gaps = 6/90 (6%)
Query: 90 PPSKRASSPPR------KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
PP+ RA + P K +D L + ++S E LRE+F FG V V L D
Sbjct: 184 PPALRAGARPEGDRLGGKYGERDDMATLRVTNVSELAEESELREMFERFGRVTRVFLAKD 243
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
R L +G ++ F RADA +A MDGF
Sbjct: 244 RETGLAKGFAFISFADRADAVRACQKMDGF 273
>gi|326929413|ref|XP_003210859.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Meleagris gallopavo]
Length = 302
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K +++ L+RNV + H+
Sbjct: 135 KSKPPKRDEK----ERKRRSPSPRPTK-----------------VHVGRLTRNVTKDHIM 173
Query: 127 EIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ +DR +L +G YV F+ DAEKA +MDG
Sbjct: 174 EIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKHMDG 220
>gi|256082942|ref|XP_002577710.1| splicing factor [Schistosoma mansoni]
gi|360043601|emb|CCD81147.1| putative splicing factor [Schistosoma mansoni]
Length = 327
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
A + R A PS PR + + LYI SL N+ E L+ IF FG++ D++L+
Sbjct: 45 AEKNRVSATPSL-----PRPSQQNRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLI 99
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D N +G G+V + DA+KA ++GF
Sbjct: 100 KDPTTNRSQGYGFVTYVNSDDAKKALDQLNGF 131
>gi|367034339|ref|XP_003666452.1| hypothetical protein MYCTH_2084160, partial [Myceliophthora
thermophila ATCC 42464]
gi|347013724|gb|AEO61207.1| hypothetical protein MYCTH_2084160, partial [Myceliophthora
thermophila ATCC 42464]
Length = 255
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 41/63 (65%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ L++NVNE HL EIF +GE+ D++L ++R L RG+ Y+ + ADA+ A
Sbjct: 112 STKIVVERLTKNVNEDHLCEIFGEYGEIDDLDLPVNRQSGLNRGTAYILYFNEADAQAAI 171
Query: 168 LYM 170
+M
Sbjct: 172 THM 174
>gi|46128317|ref|XP_388712.1| hypothetical protein FG08536.1 [Gibberella zeae PH-1]
Length = 397
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 116 LSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LS+N+NE HL+EIF FG + D++L M+R RG+ Y+ + DAE A +M
Sbjct: 145 LSKNINESHLQEIFGQFGRIKDLDLPMNRTFATNRGTAYILYDYEEDAEAAISHM 199
>gi|384497441|gb|EIE87932.1| hypothetical protein RO3G_12643 [Rhizopus delemar RA 99-880]
Length = 291
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 28/126 (22%)
Query: 51 RSLSSSSSPSRSTNSRSRSPPPQRNK-SPAV--AARRGRSPAPPSKRASSPPRKASTEND 107
++ SSS PS+ T PP RNK +P+V R R +D
Sbjct: 176 KTEESSSGPSKYT------PPHLRNKGTPSVGETMREKR-------------------DD 210
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + +LS +V + + ++F+ FG + V L DR NL +G +V F +R DA++AQ
Sbjct: 211 SATLRVTNLSEDVTDSDIYDLFNRFGNIARVYLARDRETNLCKGFAFVSFNSREDADRAQ 270
Query: 168 LYMDGF 173
++G+
Sbjct: 271 QAINGY 276
>gi|363739745|ref|XP_415051.3| PREDICTED: RNA-binding protein with serine-rich domain 1 [Gallus
gallus]
Length = 284
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K +++ L+RNV + H+
Sbjct: 117 KSKPPKRDEK----ERKRRSPSPRPTK-----------------VHVGRLTRNVTKDHIM 155
Query: 127 EIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ +DR +L +G YV F+ DAEKA +MDG
Sbjct: 156 EIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKHMDG 202
>gi|392340356|ref|XP_003754049.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Rattus norvegicus]
gi|392347868|ref|XP_003749954.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Rattus norvegicus]
Length = 282
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 63/111 (56%), Gaps = 23/111 (20%)
Query: 64 NSRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNE 122
+S S+S PP+R++ R+ RSP+P P+K ++I LSRNV +
Sbjct: 113 SSGSKSEPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLSRNVTK 151
Query: 123 GHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
H+ EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 152 DHIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 202
>gi|449278940|gb|EMC86668.1| RNA-binding protein with serine-rich domain 1, partial [Columba
livia]
Length = 284
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K +++ L+RNV + H+
Sbjct: 117 KSKPPKRDEK----ERKRRSPSPRPTK-----------------VHVGRLTRNVTKDHIM 155
Query: 127 EIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ +DR +L +G YV F+ DAEKA +MDG
Sbjct: 156 EIFSTYGKIKMIDMPVDRLNPHLSKGYAYVEFENPDDAEKALKHMDG 202
>gi|408390246|gb|EKJ69651.1| hypothetical protein FPSE_10188 [Fusarium pseudograminearum CS3096]
Length = 345
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 116 LSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LS+N+NE HL+EIF FG + D++L M+R RG+ Y+ + DAE A +M
Sbjct: 134 LSKNINESHLQEIFGQFGRIKDLDLPMNRTFGTNRGTAYILYDYEEDAEAAISHM 188
>gi|297736228|emb|CBI24866.3| unnamed protein product [Vitis vinifera]
Length = 694
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 75 NKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGE 134
N PAV +R PS S + + DS ++++++ + L F+ FGE
Sbjct: 490 NAKPAVDTQRESQKMQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGE 549
Query: 135 VVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQR 185
VV V +V D A P+GS YV F + AE A L +DG + +L++++R
Sbjct: 550 VVKVIIVTDAATGQPKGSAYVEFMRKEAAEHA-LSLDGTSFMSRILKVVKR 599
>gi|195499460|ref|XP_002096957.1| GE25959 [Drosophila yakuba]
gi|194183058|gb|EDW96669.1| GE25959 [Drosophila yakuba]
Length = 375
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FG+V +VE +DR N RG +V + T D E A +
Sbjct: 223 IHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRYHPNFGRGVAFVEYATAEDCESAMKH 282
Query: 170 MDG 172
MDG
Sbjct: 283 MDG 285
>gi|351696327|gb|EHA99245.1| RNA-binding protein with serine-rich domain 1 [Heterocephalus
glaber]
Length = 249
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 62/112 (55%), Gaps = 23/112 (20%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 122 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 160
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQ 177
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG H Q
Sbjct: 161 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDGGHAPQ 212
>gi|359487356|ref|XP_003633575.1| PREDICTED: uncharacterized protein LOC100855398 [Vitis vinifera]
Length = 700
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 1/111 (0%)
Query: 75 NKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGE 134
N PAV +R PS S + + DS ++++++ + L F+ FGE
Sbjct: 496 NAKPAVDTQRESQKMQPSAPGSYSTGRPLEDADSRTIFVNNVHFAATKDSLSRHFNKFGE 555
Query: 135 VVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQR 185
VV V +V D A P+GS YV F + AE A L +DG + +L++++R
Sbjct: 556 VVKVIIVTDAATGQPKGSAYVEFMRKEAAEHA-LSLDGTSFMSRILKVVKR 605
>gi|427794973|gb|JAA62938.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 509
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 92 SKRASSPPRKASTENDSLV--------LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
++R + + AST N +L LY+ SL N+ E L+ IF FG++ +EL+ D
Sbjct: 227 AERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNITEEMLKGIFEPFGKIDKIELIKD 286
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
N +G G++ F DA+KA ++GF
Sbjct: 287 METNRSKGYGFITFHDSEDAKKALEQLNGFE 317
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
E D ++ LS+ + L E FS G+V DV L+MD +G YV F+ D E
Sbjct: 146 ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQ---DVE 202
Query: 165 KAQLYM 170
L M
Sbjct: 203 SVPLAM 208
>gi|194903073|ref|XP_001980809.1| GG16863 [Drosophila erecta]
gi|190652512|gb|EDV49767.1| GG16863 [Drosophila erecta]
Length = 377
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FG+V +VE +DR N RG +V + T D E A +
Sbjct: 223 IHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRYHPNFGRGVAFVEYATAEDCESAMKH 282
Query: 170 MDG 172
MDG
Sbjct: 283 MDG 285
>gi|427792527|gb|JAA61715.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 497
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 8/91 (8%)
Query: 92 SKRASSPPRKASTENDSLV--------LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
++R + + AST N +L LY+ SL N+ E L+ IF FG++ +EL+ D
Sbjct: 215 AERNRAAAQNASTSNSTLQRGNVGPMRLYVGSLHFNITEEMLKGIFEPFGKIDKIELIKD 274
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
N +G G++ F DA+KA ++GF
Sbjct: 275 METNRSKGYGFITFHDSEDAKKALEQLNGFE 305
Score = 39.3 bits (90), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
E D ++ LS+ + L E FS G+V DV L+MD +G YV F+ D E
Sbjct: 134 ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEFQ---DVE 190
Query: 165 KAQLYM 170
L M
Sbjct: 191 SVPLAM 196
>gi|149244172|ref|XP_001526629.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146449023|gb|EDK43279.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 510
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 54/102 (52%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS 130
P +R VA + ++ ++P A E + L++ LS N+++ L++ F
Sbjct: 222 PKKRKNEEVVADETSKKSKTEAEETAAPTSPAVAEEEGATLFVGRLSWNIDDDWLKKEFE 281
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ G+V+ ++M+RA RG GYV FKT+A AEKA M G
Sbjct: 282 HLGDVIGARVIMERATGKSRGYGYVDFKTKAAAEKALAEMQG 323
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS N N L EIF +G V+ + P+G GYV+F + +A+ A
Sbjct: 362 SDTLFIGNLSFNANRDSLFEIFGEYGTVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAAL 421
Query: 168 LYMDG 172
++G
Sbjct: 422 EALNG 426
>gi|444314863|ref|XP_004178089.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
gi|387511128|emb|CCH58570.1| hypothetical protein TBLA_0A07810 [Tetrapisispora blattae CBS 6284]
Length = 472
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 11/141 (7%)
Query: 35 SSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKR 94
++S S +S + + + S++ ++S PS TN + P N + SP
Sbjct: 84 NTSGSSNSATNNDTISKTDATSQEPSNITNDEKKQDTPNTNNN--------LSPTAFEST 135
Query: 95 ASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGY 154
A++ P+KA DS ++I L+ + E LR+ F+ +G V+DV+++ D RG G+
Sbjct: 136 ANAAPKKADLSKDSCKMFIGGLNWDTTEDVLRQYFNKYGNVIDVKIMTDGHNGKSRGFGF 195
Query: 155 VRFKTRADAE---KAQLYMDG 172
+ F+ + + K Q +DG
Sbjct: 196 LTFENSSSVDEVVKTQHILDG 216
>gi|294868078|ref|XP_002765370.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239865389|gb|EEQ98087.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 204
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 38/66 (57%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
ND + +D + V + LRE FS FGE+ DV + +DR + RG G+VRF R DAE
Sbjct: 7 NDLFSIKVDGIDERVRKDDLREAFSKFGEIGDVFIPLDRYTGVSRGFGFVRFYERRDAED 66
Query: 166 AQLYMD 171
A MD
Sbjct: 67 AIRDMD 72
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 5/92 (5%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
A + R A PS PR + + LYI SL N+ E L+ IF FG++ D++L+
Sbjct: 181 AEKNRVSATPSL-----PRPSQQNRGPMKLYIGSLHYNITEEMLKGIFEPFGKIEDIKLI 235
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D N +G G+V + DA+KA ++GF
Sbjct: 236 KDPTTNRSQGYGFVTYVNSDDAKKALDQLNGF 267
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 92 SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
++R P + E D+ +++ LS + + L + F++ G++ DV L+MD +G
Sbjct: 87 TERRQKSPELSPEERDARTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMDNKTKRSKG 146
Query: 152 SGYVRFKTRADAEKAQL 168
YV F+ + E AQL
Sbjct: 147 IAYVEFR---EVESAQL 160
>gi|291414608|ref|XP_002723548.1| PREDICTED: RNA-binding protein S1, serine-rich domain-like
[Oryctolagus cuniculus]
Length = 305
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ +DR +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVDRMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|355785944|gb|EHH66127.1| SR-related protein LDC2 [Macaca fascicularis]
Length = 285
Score = 56.2 bits (134), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 63/110 (57%), Gaps = 23/110 (20%)
Query: 65 SRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEG 123
SRS++ PP+R++ R+ RSP+P P+K ++I L+RNV +
Sbjct: 136 SRSKTKPPERDE----KERKRRSPSPKPTK-----------------VHIGRLTRNVTKD 174
Query: 124 HLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
H+ EIFS +G++ +++ ++R +L +G YV F+ +A+KA +MDG
Sbjct: 175 HIMEIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEADKALKHMDG 224
>gi|294947288|ref|XP_002785313.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239899086|gb|EER17109.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 281
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 79/185 (42%), Gaps = 12/185 (6%)
Query: 26 RSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRG 85
R S S+ R S S RS SR S SRS +SR R P R RG
Sbjct: 53 RERSESEDRKSDSEASVRSSRRGDSRGRGEKKSCSRSPHSRRRGTSPDRESRSRSEGGRG 112
Query: 86 RSPAPPSKRA---------SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVV 136
RS + R +P + S L + +L VN LR+ F FG V
Sbjct: 113 RSESDSRHRGPSRRERSRSRTPGGRGGAREGSCSLLVRNLPDEVNPMRLRDAFERFGYVR 172
Query: 137 DVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVL 196
DV + +D PRG G+V F DA++A+ MDG RL S ++ E+ ++ S
Sbjct: 173 DVYIPLDYYSKRPRGFGFVEFDDPRDADEARDAMDG-QRLGS--NYVEVEVAKQRRKSPR 229
Query: 197 ILRRM 201
+RR+
Sbjct: 230 TMRRL 234
>gi|317419151|emb|CBN81188.1| RNA-binding protein with serine-rich domain 1, partial
[Dicentrarchus labrax]
Length = 289
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+Y+ L+RNV + H++EIFS +G++ +++ M+R +L +G YV F+T +AEKA +
Sbjct: 147 VYLGRLTRNVIKEHIQEIFSTYGKIKMIDMPMNRVHPHLSKGYAYVEFETPEEAEKALKH 206
Query: 170 MDG 172
MDG
Sbjct: 207 MDG 209
>gi|195444734|ref|XP_002070004.1| GK11259 [Drosophila willistoni]
gi|194166089|gb|EDW80990.1| GK11259 [Drosophila willistoni]
Length = 389
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FGEV VE DR N RG YV + T D + A +
Sbjct: 239 IHVGRLTRNVTKDHVLEIFSSFGEVKSVEFPTDRFHPNFGRGVAYVEYGTAEDCKSAMKH 298
Query: 170 MDG 172
MDG
Sbjct: 299 MDG 301
>gi|346465875|gb|AEO32782.1| hypothetical protein [Amblyomma maculatum]
Length = 558
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 50/92 (54%), Gaps = 2/92 (2%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
A R R+ A + +SS ++ + + LY+ SL N+ E L+ IF FG++ +EL+
Sbjct: 274 AERNRAAAQNASTSSSTLQRGNV--GPMRLYVGSLHFNITEDMLKGIFEPFGKIDKIELI 331
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D N +G G++ F DA+KA ++GF
Sbjct: 332 KDMETNRSKGYGFITFHDSEDAKKALEQLNGF 363
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 26/53 (49%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
E D ++ LS+ + L E FS G+V DV L+MD +G YV F
Sbjct: 193 ERDMRTVFCMQLSQRIRARDLEEFFSAVGKVRDVRLIMDNKTRRSKGIAYVEF 245
>gi|312385992|gb|EFR30370.1| hypothetical protein AND_00084 [Anopheles darlingi]
Length = 330
Score = 55.8 bits (133), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 70/168 (41%), Gaps = 47/168 (27%)
Query: 49 RSRSLSSSSSPSRSTNSRSRSP-PPQRNKSPAV----AARRGRSPAPPSKRASSPPRKAS 103
RSR+ +++ SRS RS+SP Q NK +V AA+ R + R SS PR
Sbjct: 89 RSRTKRKTNTESRS---RSKSPVAAQWNKESSVNKDAAAKAVRGKSKEKDRRSSEPRDND 145
Query: 104 TENDS---------------------------------------LVLYIDSLSRNVNEGH 124
EN S + ++I L+RNV H
Sbjct: 146 KENSSRQPARGGSVEKSNKDSRSRRSRSDSSKRKRKERSLTPRPVRIHIGRLTRNVTRDH 205
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ EIFS +GEV +VE MDR RG YV + AE A +MDG
Sbjct: 206 VMEIFSTYGEVRNVEFPMDRFQPFGRGFCYVEYADADGAENAMKHMDG 253
>gi|345569038|gb|EGX51907.1| hypothetical protein AOL_s00043g641 [Arthrobotrys oligospora ATCC
24927]
Length = 512
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 76 KSPAV---AARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNF 132
K PAV R+ AP + + S E S L++ LS NV+E LR F +
Sbjct: 219 KKPAVPEPKKRKAEEEAPAFSKKAKANEDGSEE--SKTLFVGQLSWNVDEDWLRREFEDV 276
Query: 133 GEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
V + +V D N +G GYV F TRADAEKA
Sbjct: 277 ATVENARVVWDNQRNRSKGIGYVDFATRADAEKA 310
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 33/65 (50%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS N +E L S GEV V + D+ +G YV F T +A+KA
Sbjct: 353 SDTLFVGNLSFNADEEALGAAMSEHGEVTSVRIPTDKDTGNKKGFAYVTFSTIDEAKKAH 412
Query: 168 LYMDG 172
M+G
Sbjct: 413 AAMNG 417
>gi|189237575|ref|XP_974855.2| PREDICTED: similar to splicing factor [Tribolium castaneum]
Length = 501
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ +++L+MD +G G++ F+ DA+KA +
Sbjct: 243 LYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQL 302
Query: 171 DGFH 174
+GF
Sbjct: 303 NGFE 306
Score = 41.2 bits (95), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 83 RRGRSPAPPSKRASSPPRKAS-TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
RR RSP R++SP + S E D+ +++ LS+ + L E FS+ G+V DV L+
Sbjct: 118 RRNRSPL--GLRSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLI 175
Query: 142 MDRAVNLPRGSGYVRFK 158
+ +G Y+ FK
Sbjct: 176 VCNKTRRFKGIAYIEFK 192
>gi|331284191|ref|NP_001193587.1| ribonucleic acid binding protein S1-like [Bos taurus]
Length = 294
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 25/114 (21%)
Query: 61 RSTNSRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRN 119
R + S+ +SP P RR RSPAP P+K +++ L+R
Sbjct: 97 RRSGSKPKSP------RPDEKERRRRSPAPKPTK-----------------VHVARLTRK 133
Query: 120 VNEGHLREIFSNFGEVVDVELVMDRAVNLP-RGSGYVRFKTRADAEKAQLYMDG 172
V H+REIFS FG V ++L DR P +G YV F+ +A KA +MDG
Sbjct: 134 VTREHIREIFSTFGRVRKIDLRRDRMRAHPSQGHAYVEFENPEEAAKALKHMDG 187
>gi|296485840|tpg|DAA27955.1| TPA: RNA-binding protein S1, serine-rich domain-like [Bos taurus]
Length = 265
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 55/114 (48%), Gaps = 25/114 (21%)
Query: 61 RSTNSRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRN 119
R + S+ +SP P RR RSPAP P+K +++ L+R
Sbjct: 97 RRSGSKPKSP------RPDEKERRRRSPAPKPTK-----------------VHVARLTRK 133
Query: 120 VNEGHLREIFSNFGEVVDVELVMDRAVNLP-RGSGYVRFKTRADAEKAQLYMDG 172
V H+REIFS FG V ++L DR P +G YV F+ +A KA +MDG
Sbjct: 134 VTREHIREIFSTFGRVRKIDLRRDRMRAHPSQGHAYVEFENPEEAAKALKHMDG 187
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ +++L+MD +G G++ F+ DA+KA +
Sbjct: 264 LYVGSLHFNITEDMLRSIFEPFGKIDNIQLIMDPETGRSKGYGFIAFRNCEDAKKALEQL 323
Query: 171 DGFH 174
+GF
Sbjct: 324 NGFE 327
Score = 41.2 bits (95), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 83 RRGRSPAPPSKRASSPPRKAS-TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
RR RSP R++SP + S E D+ +++ LS+ + L E FS+ G+V DV L+
Sbjct: 139 RRNRSPL--GLRSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLI 196
Query: 142 MDRAVNLPRGSGYVRFK 158
+ +G Y+ FK
Sbjct: 197 VCNKTRRFKGIAYIEFK 213
>gi|195330384|ref|XP_002031884.1| GM23813 [Drosophila sechellia]
gi|194120827|gb|EDW42870.1| GM23813 [Drosophila sechellia]
Length = 375
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FG+V +VE +DR N RG +V + T D E A +
Sbjct: 221 IHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKH 280
Query: 170 MDG 172
MDG
Sbjct: 281 MDG 283
>gi|348502018|ref|XP_003438566.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Oreochromis niloticus]
Length = 285
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 19/92 (20%)
Query: 83 RRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
RR RSP P P+K +++ L+RNV + H++EIFS +G++ +E+
Sbjct: 131 RRRRSPTPKPTK-----------------VFLGRLTRNVIKEHIQEIFSTYGKIKMIEMP 173
Query: 142 MDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
M+R +L +G YV ++T +AEKA +MDG
Sbjct: 174 MNRMHPHLSKGYAYVEYETSEEAEKALKHMDG 205
>gi|8101025|gb|AAF72519.1| SR-related protein LD2 [Homo sapiens]
Length = 228
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 63 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 101
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 102 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 148
>gi|14198039|gb|AAH08089.1| Rnps1 protein, partial [Mus musculus]
Length = 214
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 49 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 87
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 88 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 134
>gi|351703916|gb|EHB06835.1| RNA-binding protein with serine-rich domain 1 [Heterocephalus
glaber]
Length = 242
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 91 PSKRASSPPR---KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-V 146
PS S PP KAS + + I L+RNV + H+ EIFS +G++ + + ++R
Sbjct: 113 PSCSKSKPPERDEKASPSPKPIEVRIRRLTRNVTKAHIMEIFSTYGKIKMMGMPVERMHP 172
Query: 147 NLPRGSGYVRFKTRADAEKAQLYMDG 172
+LP+ YV F+ +AEKA +MDG
Sbjct: 173 HLPKAYAYVEFENPDEAEKALKHMDG 198
>gi|346977749|gb|EGY21201.1| hypothetical protein VDAG_02725 [Verticillium dahliae VdLs.17]
Length = 309
Score = 55.5 bits (132), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 84 RGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
RGRSP P S + ++ L++NVNE HL EIF FG V D++L ++
Sbjct: 67 RGRSPTPVK---------------STKIVVERLTKNVNEDHLYEIFGQFGHVKDLDLPIN 111
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIV---RELIMSVLILRR 200
R + RG+ Y+ + ADAE A M H Q ++ IV R+L + + RR
Sbjct: 112 R-MGTNRGTAYILYDDEADAEDAIANM---HEAQLDGAVINVSIVLPRRKLSPAPPLARR 167
Query: 201 MGQNDQENP 209
D NP
Sbjct: 168 GAGIDPRNP 176
>gi|302420471|ref|XP_003008066.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261353717|gb|EEY16145.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 310
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 22/129 (17%)
Query: 84 RGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
RGRSP P S + ++ L++NVNE HL EIF FG V D++L ++
Sbjct: 67 RGRSPTPVK---------------STKIVVERLTKNVNEDHLYEIFGQFGRVKDLDLPIN 111
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIV---RELIMSVLILRR 200
R + RG+ Y+ + ADAE A M H Q ++ IV R+L + + RR
Sbjct: 112 R-MGTNRGTAYILYDDEADAEDAIANM---HEAQLDGAVINVSIVLPRRKLSPAPPLARR 167
Query: 201 MGQNDQENP 209
D NP
Sbjct: 168 GAGIDPRNP 176
>gi|24645403|ref|NP_649903.1| RNA-binding protein S1 [Drosophila melanogaster]
gi|21430218|gb|AAM50787.1| LD23870p [Drosophila melanogaster]
gi|22859164|emb|CAD30680.1| RNA-binding protein S1 [Drosophila melanogaster]
gi|23170813|gb|AAF54396.2| RNA-binding protein S1 [Drosophila melanogaster]
gi|220943904|gb|ACL84495.1| RnpS1-PA [synthetic construct]
gi|220953778|gb|ACL89432.1| RnpS1-PA [synthetic construct]
Length = 374
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+++ L+RNV + H+ EIFS+FG+V +VE +DR N RG +V + T D E A +
Sbjct: 221 IHVGRLTRNVTKDHVFEIFSSFGDVKNVEFPVDRFHPNFGRGVAFVEYATPEDCESAMKH 280
Query: 170 MDG 172
MDG
Sbjct: 281 MDG 283
>gi|432102512|gb|ELK30083.1| RNA-binding protein with serine-rich domain 1 [Myotis davidii]
Length = 368
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 128 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 166
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 167 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 213
>gi|392355607|ref|XP_002730274.2| PREDICTED: uncharacterized protein LOC688526 [Rattus norvegicus]
Length = 310
Score = 55.1 bits (131), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 64/111 (57%), Gaps = 23/111 (20%)
Query: 64 NSRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNE 122
+S S+S PP+R++ R+ RSP+P P+K ++I+ L+RNV +
Sbjct: 131 SSHSKSKPPKRDE----KERKRRSPSPKPTK-----------------VHIERLTRNVTK 169
Query: 123 GHLREIFSNFGEVVDVELVMDRAV-NLPRGSGYVRFKTRADAEKAQLYMDG 172
H+ EIFS +G++ +++ ++R + +L +G YV F+ +AEK +M+G
Sbjct: 170 DHIMEIFSTYGKIKMIDMPVERILPHLSKGYVYVEFENPDEAEKTLKHMNG 220
>gi|293350798|ref|XP_002727598.1| PREDICTED: uncharacterized protein LOC688526 [Rattus norvegicus]
Length = 337
Score = 55.1 bits (131), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 63/110 (57%), Gaps = 23/110 (20%)
Query: 65 SRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEG 123
S S+S PP+R++ R+ RSP+P P+K ++I+ L+RNV +
Sbjct: 159 SHSKSKPPKRDE----KERKRRSPSPKPTK-----------------VHIERLTRNVTKD 197
Query: 124 HLREIFSNFGEVVDVELVMDRAV-NLPRGSGYVRFKTRADAEKAQLYMDG 172
H+ EIFS +G++ +++ ++R + +L +G YV F+ +AEK +M+G
Sbjct: 198 HIMEIFSTYGKIKMIDMPVERILPHLSKGYVYVEFENPDEAEKTLKHMNG 247
>gi|58265336|ref|XP_569824.1| RNA binding protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57226056|gb|AAW42517.1| RNA binding protein, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 393
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
V+ + LS+NV +GHL EIFS +G + ++L + + L +G + F T A A KA
Sbjct: 60 VIVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVKC 119
Query: 170 MDGFHRLQSLLQL 182
MDG S L +
Sbjct: 120 MDGGQLDGSFLNV 132
>gi|134109015|ref|XP_776622.1| hypothetical protein CNBC1150 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259302|gb|EAL21975.1| hypothetical protein CNBC1150 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 375
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
V+ + LS+NV +GHL EIFS +G + ++L + + L +G + F T A A KA
Sbjct: 60 VIVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVKC 119
Query: 170 MDGFHRLQSLLQL 182
MDG S L +
Sbjct: 120 MDGGQLDGSFLNV 132
>gi|90075158|dbj|BAE87259.1| unnamed protein product [Macaca fascicularis]
Length = 362
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 215 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 253
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 254 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 300
>gi|405963791|gb|EKC29337.1| RNA-binding protein 39 [Crassostrea gigas]
Length = 557
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ D++L+ D N +G G++ F DA+KA +
Sbjct: 262 LYVGSLHFNITEEMLRGIFEPFGKIDDIKLIRDHETNRSQGYGFITFHDSEDAKKALEQL 321
Query: 171 DGFH 174
+GF
Sbjct: 322 NGFE 325
>gi|297842099|ref|XP_002888931.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297334772|gb|EFH65190.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 37/62 (59%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS E LR+ F FG+++ + LVMD+ N PRG ++R++T +A KA M
Sbjct: 79 LYVSGLSFRTTEDTLRDTFEQFGKLIHMNLVMDKVANRPRGFAFLRYETEEEAMKAIQGM 138
Query: 171 DG 172
G
Sbjct: 139 HG 140
>gi|426254197|ref|XP_004020767.1| PREDICTED: RNA-binding protein with serine-rich domain 1 [Ovis
aries]
Length = 359
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDE----KERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|7505166|pir||T16535 hypothetical protein K02F3.11 - Caenorhabditis elegans
Length = 304
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN-LPRGSGYVRFKTRADAEKAQLY 169
+ I +LSRNV + HL EIFS +G + +V+L DR N + RG GYV + DAEK+ +
Sbjct: 150 VVIKNLSRNVLKTHLEEIFSIYGAIKNVDLPPDRFHNHVHRGYGYVEYDNLEDAEKSIKH 209
Query: 170 MDG 172
MDG
Sbjct: 210 MDG 212
>gi|321254530|ref|XP_003193105.1| RNA binding protein [Cryptococcus gattii WM276]
gi|317459574|gb|ADV21318.1| RNA binding protein, putative [Cryptococcus gattii WM276]
Length = 380
Score = 54.7 bits (130), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
AS V+ + LS+NV +GHL EIFS +G + ++L + + L +G + F A
Sbjct: 52 ASGGGKYKVIVVSGLSKNVIKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDNPA 111
Query: 162 DAEKAQLYMDGFHRLQSLLQLLQREI 187
A KA MDG S L +QR+I
Sbjct: 112 AASKAVKCMDGGQLDGSFLN-VQRQI 136
>gi|90086097|dbj|BAE91601.1| unnamed protein product [Macaca fascicularis]
Length = 243
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|441659623|ref|XP_003269222.2| PREDICTED: uncharacterized protein LOC100580521 [Nomascus
leucogenys]
Length = 580
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLP 149
P KR ++ S ++I L+RNV + H+ EIFS +G++ +++ ++R +L
Sbjct: 496 PPKRDEKERKRRSPSPKPTKVHIGRLTRNVTKDHIMEIFSTYGKIKMIDMPVERMHPHLS 555
Query: 150 RGSGYVRFKTRADAEKAQLYMDG 172
+G YV F+ +AEKA +MDG
Sbjct: 556 KGYAYVEFENPDEAEKALKHMDG 578
>gi|426230236|ref|XP_004009183.1| PREDICTED: uncharacterized protein LOC101103566 [Ovis aries]
Length = 256
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
+R RS + +R R+ S L+I L+RNV + H+REIFS FG+V +++
Sbjct: 106 GKRQRSHSKQPERDEKEGRRHSPSPKPTKLHIARLTRNVTKDHIREIFSTFGKVRVIDMP 165
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
++R ++ YV F+T AEKA YMDG
Sbjct: 166 VER-MHPGLSDAYVEFETPDGAEKALKYMDG 195
>gi|417398674|gb|JAA46370.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 305
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|41054291|ref|NP_956055.1| RNA-binding protein with serine-rich domain 1 [Danio rerio]
gi|82237740|sp|Q6PG31.1|RNPS1_DANRE RecName: Full=RNA-binding protein with serine-rich domain 1
gi|34785364|gb|AAH57251.1| RNA binding protein S1, serine-rich domain [Danio rerio]
Length = 283
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLY 169
LY+ L+RNV + H++EIF+ +G++ +++ DR N+ +G YV +++ DA+KA +
Sbjct: 139 LYLGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRLHPNVSKGYAYVEYESPEDAQKALKH 198
Query: 170 MDG 172
MDG
Sbjct: 199 MDG 201
>gi|58865358|ref|NP_001011890.1| RNA-binding protein with serine-rich domain 1 [Rattus norvegicus]
gi|332845028|ref|XP_003314970.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 2
[Pan troglodytes]
gi|348585545|ref|XP_003478532.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Cavia porcellus]
gi|410049808|ref|XP_003952811.1| PREDICTED: RNA-binding protein with serine-rich domain 1 [Pan
troglodytes]
gi|81910893|sp|Q6AYK1.1|RNPS1_RAT RecName: Full=RNA-binding protein with serine-rich domain 1
gi|50927339|gb|AAH79014.1| Ribonucleic acid binding protein S1 [Rattus norvegicus]
gi|149052006|gb|EDM03823.1| rCG33175, isoform CRA_a [Rattus norvegicus]
gi|149052007|gb|EDM03824.1| rCG33175, isoform CRA_a [Rattus norvegicus]
gi|410224122|gb|JAA09280.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410224124|gb|JAA09281.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410224126|gb|JAA09282.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410253516|gb|JAA14725.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410253518|gb|JAA14726.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410253520|gb|JAA14727.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410296370|gb|JAA26785.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410296372|gb|JAA26786.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410296374|gb|JAA26787.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
Length = 305
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDE----KERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|410333237|gb|JAA35565.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410333239|gb|JAA35566.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
gi|410333241|gb|JAA35567.1| RNA binding protein S1, serine-rich domain [Pan troglodytes]
Length = 305
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDE----KERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|297283274|ref|XP_002802411.1| PREDICTED: hypothetical protein LOC695816 isoform 2 [Macaca
mulatta]
gi|194381680|dbj|BAG64209.1| unnamed protein product [Homo sapiens]
Length = 268
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 103 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 141
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 142 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 188
>gi|121674799|ref|NP_001073597.1| RNA-binding protein with serine-rich domain 1 isoform 2 [Mus
musculus]
gi|296219321|ref|XP_002755844.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 2
[Callithrix jacchus]
gi|297283272|ref|XP_001084468.2| PREDICTED: hypothetical protein LOC695816 isoform 1 [Macaca
mulatta]
gi|402907336|ref|XP_003916432.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 2
[Papio anubis]
gi|403273304|ref|XP_003928459.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 2
[Saimiri boliviensis boliviensis]
gi|18032270|gb|AAL56665.1|AF274003_1 splicing-related factor RNPS1 [Homo sapiens]
gi|74138721|dbj|BAE27176.1| unnamed protein product [Mus musculus]
gi|74139112|dbj|BAE38451.1| unnamed protein product [Mus musculus]
gi|221045652|dbj|BAH14503.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 117 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 155
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 156 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 202
>gi|410985347|ref|XP_003998984.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 1
[Felis catus]
gi|410985349|ref|XP_003998985.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 2
[Felis catus]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|350581893|ref|XP_003481146.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
isoform 1 [Sus scrofa]
gi|350581895|ref|XP_003481147.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
isoform 2 [Sus scrofa]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|431906656|gb|ELK10777.1| RNA-binding protein with serine-rich domain 1 [Pteropus alecto]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|395515764|ref|XP_003762069.1| PREDICTED: RNA-binding protein with serine-rich domain 1
[Sarcophilus harrisii]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|355709868|gb|EHH31332.1| SR-related protein LDC2 [Macaca mulatta]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|156120331|ref|NP_001095311.1| RNA-binding protein with serine-rich domain 1 [Bos taurus]
gi|229891545|sp|A6QR16.1|RNPS1_BOVIN RecName: Full=RNA-binding protein with serine-rich domain 1
gi|151554747|gb|AAI50076.1| RNPS1 protein [Bos taurus]
gi|296473430|tpg|DAA15545.1| TPA: RNA-binding protein with serine-rich domain 1 [Bos taurus]
gi|410066866|gb|AFV58074.1| RNA binding protein S1 [Ovis aries]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|3253165|gb|AAC39791.1| SR protein [Homo sapiens]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|6857826|ref|NP_006702.1| RNA-binding protein with serine-rich domain 1 [Homo sapiens]
gi|18379334|ref|NP_542161.1| RNA-binding protein with serine-rich domain 1 [Homo sapiens]
gi|121674790|ref|NP_001073596.1| RNA-binding protein with serine-rich domain 1 isoform 1 [Mus
musculus]
gi|121674793|ref|NP_033096.2| RNA-binding protein with serine-rich domain 1 isoform 1 [Mus
musculus]
gi|197099284|ref|NP_001127682.1| RNA-binding protein with serine-rich domain 1 [Pongo abelii]
gi|57088095|ref|XP_537005.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 1
[Canis lupus familiaris]
gi|149750931|ref|XP_001498799.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Equus caballus]
gi|296219319|ref|XP_002755843.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 1
[Callithrix jacchus]
gi|301782327|ref|XP_002926566.1| PREDICTED: hypothetical protein LOC100467265 [Ailuropoda
melanoleuca]
gi|402907334|ref|XP_003916431.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 1
[Papio anubis]
gi|402907338|ref|XP_003916433.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 3
[Papio anubis]
gi|402907340|ref|XP_003916434.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 4
[Papio anubis]
gi|403273302|ref|XP_003928458.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 1
[Saimiri boliviensis boliviensis]
gi|403273306|ref|XP_003928460.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 3
[Saimiri boliviensis boliviensis]
gi|403273308|ref|XP_003928461.1| PREDICTED: RNA-binding protein with serine-rich domain 1 isoform 4
[Saimiri boliviensis boliviensis]
gi|74754492|sp|Q15287.1|RNPS1_HUMAN RecName: Full=RNA-binding protein with serine-rich domain 1;
AltName: Full=SR-related protein LDC2
gi|75070339|sp|Q5NVM8.1|RNPS1_PONAB RecName: Full=RNA-binding protein with serine-rich domain 1
gi|75076091|sp|Q4R5N1.1|RNPS1_MACFA RecName: Full=RNA-binding protein with serine-rich domain 1
gi|81916635|sp|Q99M28.1|RNPS1_MOUSE RecName: Full=RNA-binding protein with serine-rich domain 1
gi|598231|gb|AAA92859.1| RNA-binding protein [Homo sapiens]
gi|12804497|gb|AAH01659.1| RNA binding protein S1, serine-rich domain [Homo sapiens]
gi|12804793|gb|AAH01838.1| RNA binding protein S1, serine-rich domain [Homo sapiens]
gi|12805205|gb|AAH02061.1| Ribonucleic acid binding protein S1 [Mus musculus]
gi|56403679|emb|CAI29635.1| hypothetical protein [Pongo abelii]
gi|67970503|dbj|BAE01594.1| unnamed protein product [Macaca fascicularis]
gi|74185362|dbj|BAE30156.1| unnamed protein product [Mus musculus]
gi|80478658|gb|AAI08317.1| RNA binding protein S1, serine-rich domain [Homo sapiens]
gi|119605922|gb|EAW85516.1| RNA binding protein S1, serine-rich domain, isoform CRA_a [Homo
sapiens]
gi|119605923|gb|EAW85517.1| RNA binding protein S1, serine-rich domain, isoform CRA_a [Homo
sapiens]
gi|119605926|gb|EAW85520.1| RNA binding protein S1, serine-rich domain, isoform CRA_a [Homo
sapiens]
gi|119605928|gb|EAW85522.1| RNA binding protein S1, serine-rich domain, isoform CRA_a [Homo
sapiens]
gi|123997677|gb|ABM86440.1| RNA binding protein S1, serine-rich domain [synthetic construct]
gi|148690368|gb|EDL22315.1| mCG12830, isoform CRA_a [Mus musculus]
gi|148690369|gb|EDL22316.1| mCG12830, isoform CRA_a [Mus musculus]
gi|157929020|gb|ABW03795.1| RNA binding protein S1, serine-rich domain [synthetic construct]
gi|158260933|dbj|BAF82644.1| unnamed protein product [Homo sapiens]
gi|208967364|dbj|BAG73696.1| RNA binding protein S1, serine-rich domain [synthetic construct]
gi|292698387|dbj|BAI99736.1| RNA binding protein S1 [Homo sapiens]
gi|336088095|dbj|BAK39907.1| ribonucleic acid binding protein S1 [Cricetulus griseus]
gi|355756471|gb|EHH60079.1| hypothetical protein EGM_11364 [Macaca fascicularis]
gi|383411527|gb|AFH28977.1| RNA-binding protein with serine-rich domain 1 [Macaca mulatta]
gi|383411529|gb|AFH28978.1| RNA-binding protein with serine-rich domain 1 [Macaca mulatta]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|384944942|gb|AFI36076.1| RNA-binding protein with serine-rich domain 1 [Macaca mulatta]
gi|384944944|gb|AFI36077.1| RNA-binding protein with serine-rich domain 1 [Macaca mulatta]
gi|384944946|gb|AFI36078.1| RNA-binding protein with serine-rich domain 1 [Macaca mulatta]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|380809038|gb|AFE76394.1| RNA-binding protein with serine-rich domain 1 [Macaca mulatta]
gi|380809040|gb|AFE76395.1| RNA-binding protein with serine-rich domain 1 [Macaca mulatta]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|397469246|ref|XP_003806272.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like [Pan
paniscus]
Length = 422
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 289 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 327
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 328 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 374
>gi|344292190|ref|XP_003417811.1| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Loxodonta africana]
Length = 305
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|326520890|dbj|BAJ92808.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 291
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 3/93 (3%)
Query: 83 RRGRSPAPPSKRASS-PPR--KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVE 139
RRGRS +P ++ S PPR +A +N L++ L+R+V + +L E+F+ G V E
Sbjct: 40 RRGRSQSPAARNGDSRPPRGGEAEEQNKGDNLHVSGLARSVTQANLDEMFNKHGRVYKAE 99
Query: 140 LVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
L+ D RG G+V+ + ADAE ++G
Sbjct: 100 LMTDPHTQESRGFGFVKMHSNADAEACITALNG 132
>gi|432951209|ref|XP_004084750.1| PREDICTED: RNA-binding protein with serine-rich domain 1-B-like
[Oryzias latipes]
Length = 290
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
+Y+ L+RNV + H+ EIFS +G++ +++ ++RA +L +G YV F++ +AEKA +
Sbjct: 148 VYLGRLTRNVIKEHIHEIFSTYGKIKMIDMPVNRAHPHLSKGYAYVEFESPEEAEKALKH 207
Query: 170 MDG 172
MDG
Sbjct: 208 MDG 210
>gi|41944563|gb|AAH65953.1| RNA binding protein S1, serine-rich domain [Danio rerio]
Length = 283
Score = 54.3 bits (129), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLY 169
LY+ L+RNV + H++EIF+ +G++ +++ DR N+ +G YV +++ DA+KA +
Sbjct: 139 LYLGRLTRNVTKDHIQEIFATYGKIKMIDMPSDRLHPNVSKGYAYVEYESPEDAQKALKH 198
Query: 170 MDG 172
MDG
Sbjct: 199 MDG 201
>gi|405118924|gb|AFR93697.1| RNA binding protein [Cryptococcus neoformans var. grubii H99]
Length = 150
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 40/73 (54%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
V+ + LS+NV +GHL EIFS +G + ++L + + L +G + F T A A KA
Sbjct: 60 VVVVSGLSKNVMKGHLDEIFSEYGRITGIDLPLFKVSGLNKGKAAIEFDTPAAASKAVKC 119
Query: 170 MDGFHRLQSLLQL 182
MDG S L +
Sbjct: 120 MDGGQLDGSFLNV 132
>gi|354494910|ref|XP_003509577.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein with
serine-rich domain 1 [Cricetulus griseus]
Length = 305
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|380496040|emb|CCF31933.1| RNA-binding protein with serine-rich domain 1 [Colletotrichum
higginsianum]
Length = 313
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+ ++ L++N+N HL EIF +G + D+ L ++ + RG+ Y+ ++T ADAE+A +M
Sbjct: 83 IVVERLTKNINVDHLEEIFGQYGRIKDLHLPINGTLGTNRGTAYILYETEADAEEAIAHM 142
>gi|344253644|gb|EGW09748.1| RNA-binding protein with serine-rich domain 1 [Cricetulus griseus]
Length = 248
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|241947949|ref|XP_002416697.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
gi|223640035|emb|CAX44279.1| pre-rRNA processing and ribosome biogenesis, nuclear localization
sequence binding, nucleolar protein, putative [Candida
dubliniensis CD36]
Length = 423
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 4/88 (4%)
Query: 89 APPSKRASSPPRK----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR 144
A SK S P K A+ + L++ LS N+++ L+ F + G V+ ++M+R
Sbjct: 172 AEESKEEVSTPVKKSKPAAVNEEPATLFVGRLSWNIDDSWLKREFEHIGGVISARVIMER 231
Query: 145 AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
A RG GYV F+T++ AEKA M G
Sbjct: 232 ATGKSRGYGYVDFETKSAAEKALEEMQG 259
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS N N +L +F +G V+ + P+G GYV+F + +A+ A
Sbjct: 297 SDTLFVGNLSFNANRDNLFTVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAAL 356
Query: 168 LYMDG 172
++G
Sbjct: 357 EALNG 361
>gi|400597757|gb|EJP65481.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 343
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + ++ LS+ +N+ HL EIF FG + D++L ++R RG+ Y+ + ADAE A
Sbjct: 129 STKIVVERLSKTINDDHLYEIFGKFGRIKDLDLPVNRTFGTNRGTAYILYDHEADAEAAI 188
Query: 168 LYMDGFHRLQSLLQLLQREIV 188
M H Q ++ IV
Sbjct: 189 ANM---HEAQVDGAIIHVSIV 206
>gi|215820612|ref|NP_001135965.1| RNA binding motif protein 39 [Acyrthosiphon pisum]
Length = 501
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ LY+ SL N+ E LR IF FG V +++L+MD +G G++ ++ DA+KA
Sbjct: 238 MKLYVGSLHYNITEEMLRGIFEPFGHVDNIQLMMDTETGRSKGYGFLTYRNAEDAKKALE 297
Query: 169 YMDGF 173
+++GF
Sbjct: 298 HLNGF 302
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 64/141 (45%), Gaps = 8/141 (5%)
Query: 21 SRSRSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPP-QRNKSPA 79
+R SRS D R R S+ R SRSR S S+ SR+RSP + P
Sbjct: 54 ARKHSRS---KDDRKHRRKSRSKDRHRSRSRDRHSRRRTSKDKRSRTRSPIKLPKYGPPL 110
Query: 80 VAARRGRSPAPPSKRASSPPRKAST--ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVD 137
R GR P+P + + PP T E D+ ++ LS+ + L E FS+ G+V D
Sbjct: 111 PPPRYGRKPSPLASKV--PPASMLTPEERDARTVFCMQLSKTIRARDLEEFFSSVGKVRD 168
Query: 138 VELVMDRAVNLPRGSGYVRFK 158
V ++ +G Y+ FK
Sbjct: 169 VRMITCNKTRRFKGIAYIEFK 189
>gi|281202751|gb|EFA76953.1| hypothetical protein PPL_09705 [Polysphondylium pallidum PN500]
Length = 425
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D L+ NV + H+ EIF FG++ VE + D+ NLP G +V F+ R + +A+ Y+
Sbjct: 306 LRVDRLTPNVTKDHIIEIFGYFGKIKKVEYLWDKERNLPLGIAFVSFEDRDERNRAKRYL 365
Query: 171 D 171
D
Sbjct: 366 D 366
>gi|281342132|gb|EFB17716.1| hypothetical protein PANDA_016241 [Ailuropoda melanoleuca]
Length = 226
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDE----KERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|452989554|gb|EME89309.1| hypothetical protein MYCFIDRAFT_149907 [Pseudocercospora fijiensis
CIRAD86]
Length = 500
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 99 PRKASTENDSLV--LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
P+KA TE+ ++ L+I +LS NV+E L F FGE+ V ++ DR +G GYV
Sbjct: 233 PKKAKTEDPNVTGNLFIGNLSWNVDEEWLTREFEEFGELKGVRIITDRDSGRSKGFGYVE 292
Query: 157 FKTRADAEKA 166
F+ DA KA
Sbjct: 293 FENAEDAAKA 302
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS + E +RE F G + + L DR P+G GYV + +A+ A
Sbjct: 350 SQTLFVGNLSFDATEDMVREYFEEHGSINGIRLPTDRESGAPKGFGYVEMGSIDEAKAAY 409
Query: 168 LYMDG 172
+ G
Sbjct: 410 EALQG 414
>gi|393246659|gb|EJD54168.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 531
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 51/100 (51%), Gaps = 7/100 (7%)
Query: 78 PAVAARRGR-----SPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNF 132
PA A +G+ APPSK+ + + E S+ ++ LS NV++ L+ F+
Sbjct: 238 PAAAPAKGKRKAEDDAAPPSKKVKTDGAEGGEEVKSI--FVGRLSWNVDDEWLKTEFAEA 295
Query: 133 GEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
GEVV + MDR +G GYV F A A+KA M+G
Sbjct: 296 GEVVSARVQMDRQTGKSKGFGYVEFADAASAKKAVETMNG 335
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 97 SPPRKASTENDS-----LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
+P R+A DS L++ +L+ + + + E+F GEVV+V L DR P+G
Sbjct: 355 NPERRAKAFGDSRSEPSATLFVGNLAFSATQDAVYELFGAVGEVVNVRLPTDRDSGQPKG 414
Query: 152 SGYVRFKTRADAEKAQLYMD 171
GYV F AD E A ++
Sbjct: 415 FGYVEF---ADVETASKALN 431
>gi|194373527|dbj|BAG56859.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 117 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 155
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 156 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 202
>gi|392579703|gb|EIW72830.1| hypothetical protein TREMEDRAFT_72897 [Tremella mesenterica DSM
1558]
Length = 388
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
V+ + L++NV+EGHLREIF +G V ++L + + L RG + F + + AEKA +
Sbjct: 83 VIVVSGLTKNVHEGHLREIFGVYGRVTGLDLPLFKVSGLNRGKAALEFDSPSAAEKAVKH 142
Query: 170 MD 171
MD
Sbjct: 143 MD 144
>gi|254572962|ref|XP_002493590.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|238033389|emb|CAY71411.1| Nucleolar protein that binds nuclear localization sequences
[Komagataella pastoris GS115]
gi|328354581|emb|CCA40978.1| Nuclear localization sequence-binding protein [Komagataella
pastoris CBS 7435]
Length = 362
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 98 PPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
P +KA TE + L++ LS ++++ L++ F + G VV ++M+RA RG GYV F
Sbjct: 116 PAKKAKTE-EITTLFVGRLSWSIDDEWLKKEFEHIGGVVGARVMMERATGRSRGYGYVDF 174
Query: 158 KTRADAEKAQLYMDG 172
+A AEKA M G
Sbjct: 175 DNKASAEKALEEMQG 189
>gi|357137359|ref|XP_003570268.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like isoform 2 [Brachypodium distachyon]
Length = 281
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 70 PPPQRNKSPAVAARRGRSPAPPSKRASSPPRKAST---ENDSLVLYIDSLSRNVNEGHLR 126
PP S A+ +G S PP RA +P ND + + +LS + E L
Sbjct: 158 PPTSDGPSALGASAKGSSYVPPRLRAGAPTDSGHDMRRRNDENSVRVTNLSEDTREPDLL 217
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQL 182
E+F FG V V + +D+ RG G+V F R DAEKA ++G+ +L++
Sbjct: 218 ELFRTFGPVSRVYVAVDQKTGSSRGFGFVNFVHREDAEKAISKLNGYGYDNLILRV 273
>gi|340370502|ref|XP_003383785.1| PREDICTED: RNA-binding protein 39-like [Amphimedon queenslandica]
Length = 497
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E L+ IFS FG V V ++ D A N+ RG +V F+ AE+A +
Sbjct: 252 LYVGSLHYNITEDMLQGIFSPFGNVERVSIMRDTATNVSRGYAFVEFRDSDSAERAMANL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|426380809|ref|XP_004057053.1| PREDICTED: uncharacterized protein LOC101139403 [Gorilla gorilla
gorilla]
Length = 459
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 60/107 (56%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 314 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 352
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G YV F+ +AEKA +MDG
Sbjct: 353 EIFSTYGKIKMIDMPVERMHPHLSKGYAYVEFENPDEAEKALKHMDG 399
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
+++ PP + + LY+ SL N+ E LR IF FG++ ++L+MD +G G
Sbjct: 343 QSAPPPFQPKAHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYG 402
Query: 154 YVRFKTRADAEKAQLYMDGFH 174
++ + DA+KA ++GF
Sbjct: 403 FITYHNADDAKKALEQLNGFE 423
>gi|258575439|ref|XP_002541901.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902167|gb|EEP76568.1| predicted protein [Uncinocarpus reesii 1704]
Length = 503
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 44/78 (56%), Gaps = 5/78 (6%)
Query: 90 PPSKRASSPPRKASTE-NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNL 148
P +K+A +K S E N S L++ +LS NV+E LR F +FGE+ V +V DR
Sbjct: 249 PVTKKA----KKDSDESNASANLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGR 304
Query: 149 PRGSGYVRFKTRADAEKA 166
RG GYV F DA KA
Sbjct: 305 SRGFGYVEFTNAEDAAKA 322
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
RA S + S E+D+L +I ++S +E ++E FS++G + + L D P+G G
Sbjct: 357 RAKSFGDQTSPESDTL--FIGNISFGADENAIQETFSSYGTISGIRLPTDPESGRPKGFG 414
Query: 154 YVRF 157
Y++F
Sbjct: 415 YIQF 418
>gi|147906110|ref|NP_001090114.1| RNA-binding protein with serine-rich domain 1-B [Xenopus laevis]
gi|123900402|sp|Q3KPW1.1|RNP1B_XENLA RecName: Full=RNA-binding protein with serine-rich domain 1-B
gi|76779600|gb|AAI06520.1| MGC131270 protein [Xenopus laevis]
Length = 283
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
++I L+RNV + H+ EIFS +G++ +++ +DR +L +G YV F+ +AEKA +
Sbjct: 140 VHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKH 199
Query: 170 MDGFHRLQSLLQLLQREIVRELIMSVLILRRM 201
MDG Q+ +EI +++ +R M
Sbjct: 200 MDGG-------QIDGQEITASAVLTPWPMRAM 224
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E ++ +F FG V V+L+ D N +G G+V+F+ A++A M
Sbjct: 217 LYVGSLHFNITEAMVKAVFEPFGTVDSVQLIYDSETNRSKGYGFVQFREAEAAKRAMEQM 276
Query: 171 DGFH 174
+GF
Sbjct: 277 NGFE 280
Score = 42.0 bits (97), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 32/61 (52%)
Query: 101 KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTR 160
+++ E D ++ L+RN+ L E FS G+V DV ++ DR +G Y+ F +
Sbjct: 111 ESAEEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDK 170
Query: 161 A 161
+
Sbjct: 171 S 171
>gi|115621276|ref|XP_800344.2| PREDICTED: uncharacterized protein LOC585553 [Strongylocentrotus
purpuratus]
Length = 328
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 41/63 (65%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAV-NLPRGSGYVRFKTRADAEKAQLY 169
L++ L+RNVN+ HL EIFS +G V +++ DR ++ RG YV F + DA+KA +
Sbjct: 176 LHVGKLTRNVNKEHLMEIFSIYGAVKSIDIPPDRVHPHMSRGFAYVDFMSSNDADKALKH 235
Query: 170 MDG 172
MDG
Sbjct: 236 MDG 238
>gi|158298413|ref|XP_318582.3| AGAP009570-PA [Anopheles gambiae str. PEST]
gi|157013868|gb|EAA14428.3| AGAP009570-PA [Anopheles gambiae str. PEST]
Length = 323
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 37/62 (59%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
++I L+RNVN H+ EIFS++GE+ V+ M+R RG YV + AE A +M
Sbjct: 185 IHIGRLTRNVNRDHIVEIFSSYGEISKVDFPMERFQPFGRGFCYVEYVDPNGAENAMKHM 244
Query: 171 DG 172
DG
Sbjct: 245 DG 246
>gi|357137357|ref|XP_003570267.1| PREDICTED: eukaryotic translation initiation factor 3 subunit
G-like isoform 1 [Brachypodium distachyon]
Length = 287
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 55/116 (47%), Gaps = 3/116 (2%)
Query: 70 PPPQRNKSPAVAARRGRSPAPPSKRASSPPRKAST---ENDSLVLYIDSLSRNVNEGHLR 126
PP S A+ +G S PP RA +P ND + + +LS + E L
Sbjct: 164 PPTSDGPSALGASAKGSSYVPPRLRAGAPTDSGHDMRRRNDENSVRVTNLSEDTREPDLL 223
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQL 182
E+F FG V V + +D+ RG G+V F R DAEKA ++G+ +L++
Sbjct: 224 ELFRTFGPVSRVYVAVDQKTGSSRGFGFVNFVHREDAEKAISKLNGYGYDNLILRV 279
>gi|332249061|ref|XP_003273679.1| PREDICTED: RNA-binding protein 39 [Nomascus leucogenys]
Length = 432
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%)
Query: 83 RRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
R+ +SPA ++ A+ + LY+ SL N+ E LR IF FG + ++L+M
Sbjct: 132 RKDKSPAEKNRAAAMANNLQKGSAGPMRLYVGSLHFNITEDMLRGIFEPFGRIESIQLMM 191
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
D +G G++ F A+KA ++GF
Sbjct: 192 DSETGRSKGYGFITFSDSECAKKALEQLNGFE 223
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
++P + + + LY+ SL N+ E LR IF FG++ ++L+MD +G G++
Sbjct: 336 ATPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFI 395
Query: 156 RFKTRADAEKAQLYMDGFHRLQSLLQL 182
+ DA+KA ++GF L+++
Sbjct: 396 TYHNADDAKKALEQLNGFELAGRLMKV 422
>gi|198414113|ref|XP_002125594.1| PREDICTED: similar to predicted protein isoform 1 [Ciona
intestinalis]
gi|198414115|ref|XP_002125677.1| PREDICTED: similar to predicted protein isoform 2 [Ciona
intestinalis]
gi|198414117|ref|XP_002125709.1| PREDICTED: similar to predicted protein isoform 3 [Ciona
intestinalis]
Length = 243
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 56/112 (50%), Gaps = 9/112 (8%)
Query: 61 RSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNV 120
R + PPQR P R +R+ +P L++ +L++N+
Sbjct: 64 RGKQRERKESPPQRRGGPTSRRSRSPRRPIRRERSPTP--------KPTKLHVGNLTKNI 115
Query: 121 NEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
N+ H+ EIFS +G+V V++ M+R +PRG YV F +A+KA +MDG
Sbjct: 116 NKEHVNEIFSYYGKVKTVDMPMERN-GIPRGLAYVEFDDHTEADKALKFMDG 166
>gi|212535966|ref|XP_002148139.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
gi|210070538|gb|EEA24628.1| conserved hypothetical protein [Talaromyces marneffei ATCC 18224]
Length = 300
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 77/152 (50%), Gaps = 7/152 (4%)
Query: 37 SRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRAS 96
S SL S SRSL+ SRS S + S R SRSRS P+R S + GR P S S
Sbjct: 17 SASLGSHSRSLNMSRSPSETRSYKRG-RSRSRSFTPERGASRSSRRGSGRWPRDRSYSRS 75
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
P + S + ++ L++NV E HL +IF FGE+ ++L +++ RG+ Y+
Sbjct: 76 LTP---ESPKRSSKIVVEKLTKNVTEEHLYDIFGTFGEIHSIDLPLNQTFMTNRGTAYIL 132
Query: 157 FKTRADAEKAQLYMDGFHRLQSLLQLLQREIV 188
+ ADAE A + H Q +L+ IV
Sbjct: 133 YHDAADAEAA---VSNMHEAQIDGAVLKVSIV 161
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
++P + + + LY+ SL N+ E LR IF FG++ ++L+MD +G G++
Sbjct: 324 ATPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFI 383
Query: 156 RFKTRADAEKAQLYMDGFHRLQSLLQL 182
+ DA+KA ++GF L+++
Sbjct: 384 TYHNADDAKKALEQLNGFELAGRLMKV 410
>gi|255935937|ref|XP_002558995.1| Pc13g05610 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583615|emb|CAP91630.1| Pc13g05610 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 288
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
SPPR A + ++ L++NV E H+REIF FG + ++L ++ A RG+ Y+
Sbjct: 91 SPPRSAK-------IVVEKLTKNVTENHIREIFGGFGVIEYLDLPINEAFMTNRGTAYIL 143
Query: 157 FKTRADAEKAQLYM 170
+ ADAE A +M
Sbjct: 144 YYDPADAEAAIAHM 157
>gi|238879474|gb|EEQ43112.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 399
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
ASTE + L++ LS N+++ L+ F + G V+ ++M+RA RG GYV F++++
Sbjct: 162 ASTE-EPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKS 220
Query: 162 DAEKAQLYMDG 172
AEKA M G
Sbjct: 221 AAEKALEEMQG 231
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS N N +L +F +G V+ + P+G GYV+F + +A+ A
Sbjct: 269 SDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAAL 328
Query: 168 LYMDG 172
M+G
Sbjct: 329 EAMNG 333
>gi|68473894|ref|XP_719050.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|68474099|ref|XP_718946.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440741|gb|EAL00044.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
gi|46440849|gb|EAL00151.1| potential nuclear localization sequence binding protein Nsr1p
[Candida albicans SC5314]
Length = 400
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
ASTE + L++ LS N+++ L+ F + G V+ ++M+RA RG GYV F++++
Sbjct: 162 ASTE-EPATLFVGRLSWNIDDAWLKREFEHIGGVIGARVIMERATGKSRGYGYVDFESKS 220
Query: 162 DAEKAQLYMDG 172
AEKA M G
Sbjct: 221 AAEKALEEMQG 231
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS N N +L +F +G V+ + P+G GYV+F + +A+ A
Sbjct: 269 SDTLFIGNLSFNANRDNLFNVFGEYGNVISCRVPTHPDTQQPKGFGYVQFSSVDEAKAAL 328
Query: 168 LYMDG 172
M+G
Sbjct: 329 EAMNG 333
>gi|400602999|gb|EJP70597.1| cutinase negative acting protein [Beauveria bassiana ARSEF 2860]
Length = 448
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 44/89 (49%), Gaps = 5/89 (5%)
Query: 89 APPSKRASS-----PPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
AP KR + P+KA +++ + L+ SLS V++ L E F +FG +V +V D
Sbjct: 178 APSKKRKAEDEIDEAPKKAKSDDAPMTLFAGSLSWGVDDNALYEAFKSFGNIVSARVVTD 237
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ RG GYV F A KA M G
Sbjct: 238 KNTGRSRGFGYVDFGDSESATKAYEAMQG 266
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
++P + + + LY+ SL N+ E LR IF FG++ ++L+MD +G G++
Sbjct: 318 AAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFI 377
Query: 156 RFKTRADAEKAQLYMDGFHRLQSLLQL 182
+ DA+KA ++GF L+++
Sbjct: 378 TYHNADDAKKALEQLNGFELAGRLMKV 404
>gi|147901029|ref|NP_001088379.1| RNA-binding protein with serine-rich domain 1-A [Xenopus laevis]
gi|82233407|sp|Q5XG24.1|RNP1A_XENLA RecName: Full=RNA-binding protein with serine-rich domain 1-A
gi|54038322|gb|AAH84646.1| LOC495230 protein [Xenopus laevis]
Length = 283
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 42/63 (66%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLY 169
++I L+RNV + H+ EIFS +G++ +++ +DR +L +G YV F+ +AEKA +
Sbjct: 140 VHIGRLTRNVTKDHILEIFSTYGKIKMIDMPVDRYHPHLSKGYAYVEFEAPEEAEKALKH 199
Query: 170 MDG 172
MDG
Sbjct: 200 MDG 202
>gi|334333581|ref|XP_001367597.2| PREDICTED: RNA-binding protein with serine-rich domain 1-like
[Monodelphis domestica]
Length = 305
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L++NV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTKNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ +R +L +G YV F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPAERMHPHLSKGYAYVEFENPDEAEKALKHMDG 225
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
++P + + + LY+ SL N+ E LR IF FG++ ++L+MD +G G++
Sbjct: 322 AAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFI 381
Query: 156 RFKTRADAEKAQLYMDGFHRLQSLLQL 182
+ DA+KA ++GF L+++
Sbjct: 382 TYHNADDAKKALEQLNGFELAGRLMKV 408
>gi|9843661|emb|CAC03604.1| SC35-like splicing factor SCL30a, 30a kD [Arabidopsis thaliana]
Length = 261
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 78 PAVAARRGRSPAPPSKRASSPPRKASTEND-SLVLYIDSLSRNVNEGHLREIFSNFGEVV 136
P RRGRSP+P + S ++D L + +L + + LR F FG V
Sbjct: 11 PRGYGRRGRSPSPRGRFG------GSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVK 64
Query: 137 DVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVL 196
D+ L D PRG G+++F ADA +A+ MDG+ L L ++ E R+ +
Sbjct: 65 DIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMR 124
Query: 197 ILRRMGQNDQ 206
R G++++
Sbjct: 125 TRDRGGRSNR 134
>gi|326518018|dbj|BAK07261.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 159
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 77/162 (47%), Gaps = 24/162 (14%)
Query: 58 SPSRSTNSRSRSPPP--------QRNKSPAVAARRGRSPAP-----PSKRASSPPRKAST 104
SP R SRSP P R++SP VA + RSP+P R+ SP R+
Sbjct: 4 SPRRRYTRPSRSPSPYKGRQKQMSRSRSP-VAQSQSRSPSPDPRSQARSRSRSPAREREP 62
Query: 105 E--NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
E N LYI LS V + LRE F+ G+VV +V++ + RG ++ T D
Sbjct: 63 EAVNHGNTLYITGLSSRVTDKELREYFNKEGKVVSCHVVLEPHTRVSRGFAFITMDTVED 122
Query: 163 AEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQN 204
AE+ Y++ QS +LL R I E ++ I++ M Q
Sbjct: 123 AERCIKYLN-----QS--ELLGRNITVEK-KTLCIVQAMCQQ 156
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
++P + + + LY+ SL N+ E LR IF FG++ ++L+MD +G G++
Sbjct: 321 AAPAFQPKSHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFI 380
Query: 156 RFKTRADAEKAQLYMDGFHRLQSLLQL 182
+ DA+KA ++GF L+++
Sbjct: 381 TYHNADDAKKALEQLNGFELAGRLMKV 407
>gi|328857644|gb|EGG06759.1| hypothetical protein MELLADRAFT_52499 [Melampsora larici-populina
98AG31]
Length = 248
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
N++ ++ I L++NV HLREIF +GE+ +++L + R + RG+ + F++ A+K
Sbjct: 57 NEARIIEISKLTKNVTTSHLREIFGVYGEIKEIDLPIVRRLGSHRGTAVMTFESSKAAQK 116
Query: 166 AQLYMD 171
A +MD
Sbjct: 117 AISHMD 122
>gi|289812790|gb|ADD18414.1| RNA-binding protein CUGBP1/BrUNO [Glossina morsitans morsitans]
Length = 706
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 44/73 (60%), Gaps = 3/73 (4%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D++ +++ + ++++E LRE+F +G V + ++ D+A + +G +V F TR A KA
Sbjct: 297 DNIKMFVGQVPKSMDEAQLREMFEEYGPVHSINVLRDKATGISKGCCFVTFYTRRAALKA 356
Query: 167 QLYMDGFHRLQSL 179
Q D H +++L
Sbjct: 357 Q---DALHNVKTL 366
>gi|15231285|ref|NP_187966.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
gi|13878011|gb|AAK44083.1|AF370268_1 putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|11994559|dbj|BAB02599.1| unnamed protein product [Arabidopsis thaliana]
gi|17104623|gb|AAL34200.1| putative serine/arginine-rich protein [Arabidopsis thaliana]
gi|332641854|gb|AEE75375.1| SC35-like splicing factor 30A [Arabidopsis thaliana]
Length = 262
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 62/130 (47%), Gaps = 7/130 (5%)
Query: 78 PAVAARRGRSPAPPSKRASSPPRKASTEND-SLVLYIDSLSRNVNEGHLREIFSNFGEVV 136
P RRGRSP+P + S ++D L + +L + + LR F FG V
Sbjct: 11 PRGYGRRGRSPSPRGRFG------GSRDSDLPTSLLVRNLRHDCRQEDLRRPFEQFGPVK 64
Query: 137 DVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVL 196
D+ L D PRG G+++F ADA +A+ MDG+ L L ++ E R+ +
Sbjct: 65 DIYLPRDYYTGDPRGFGFIQFMDPADAAEAKHQMDGYLLLGRELTVVFAEENRKKPTEMR 124
Query: 197 ILRRMGQNDQ 206
R G++++
Sbjct: 125 TRDRGGRSNR 134
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ LY+ SL N+ E LR IF FG++ ++L+MD +G G++ + DA+KA
Sbjct: 335 MRLYVGSLHFNITEDMLRGIFEPFGKIDAIQLIMDTETGRSKGYGFITYHNADDAKKALE 394
Query: 169 YMDGFHRLQSLLQL 182
++GF L+++
Sbjct: 395 QLNGFELAGRLMKV 408
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 45 RSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKAST 104
+ LS R S S S+ NSR R R +SPA A R+P P +
Sbjct: 182 KRLSPIRERKRSHSRSKDRNSRRRGSYSPRRRSPANGAGGDRTP---------PTELSPE 232
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
E D+ ++ LS+ V L E FS+ G+V DV L++ +G Y+ F+
Sbjct: 233 ERDARTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFE 286
>gi|296486203|tpg|DAA28316.1| TPA: RNA-binding protein S1, serine-rich domain-like [Bos taurus]
Length = 275
Score = 52.4 bits (124), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 43/73 (58%), Gaps = 1/73 (1%)
Query: 100 RKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
R+ S L+I L+RNV + H+REIFS FG V +++ ++R ++ YV F+T
Sbjct: 129 RRHSPSPKPTKLHIARLTRNVTKDHIREIFSTFGRVRVIDMPVER-MHPGLSDAYVEFET 187
Query: 160 RADAEKAQLYMDG 172
AEKA +MDG
Sbjct: 188 PDGAEKALKHMDG 200
>gi|340975503|gb|EGS22618.1| putative RNA binding protein [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 382
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L + ++ L++N+ E HL EIF +GE+ D++L + R RG+ Y+ + DA++A
Sbjct: 160 LQIVVERLTKNITEDHLWEIFGQYGEIEDLDLPISRVSGTNRGTAYILYYNEDDAQQAIT 219
Query: 169 YM 170
+M
Sbjct: 220 HM 221
>gi|15219486|ref|NP_177494.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11120799|gb|AAG30979.1|AC012396_15 RNA-binding glycine-rich protein, putative [Arabidopsis thaliana]
gi|62867629|gb|AAY17418.1| At1g73530 [Arabidopsis thaliana]
gi|114050615|gb|ABI49457.1| At1g73530 [Arabidopsis thaliana]
gi|332197351|gb|AEE35472.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 181
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 36/62 (58%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS E LR+ F FG ++ + +VMD+ N P+G ++R++T +A KA M
Sbjct: 79 LYVSGLSFRTTEDTLRDTFEQFGNLIHMNMVMDKVANRPKGFAFLRYETEEEAMKAIQGM 138
Query: 171 DG 172
G
Sbjct: 139 HG 140
>gi|195397963|ref|XP_002057597.1| GJ18017 [Drosophila virilis]
gi|194141251|gb|EDW57670.1| GJ18017 [Drosophila virilis]
Length = 599
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
+++ PP + + LY+ SL N+ E LR IF FG++ ++L+MD +G G
Sbjct: 325 QSAPPPFQPKAHTGPMRLYVGSLHFNITEDMLRGIFEPFGKIDVIQLIMDTETGRSKGYG 384
Query: 154 YVRFKTRADAEKAQLYMDGFH 174
++ + DA+KA ++GF
Sbjct: 385 FITYHNADDAKKALEQLNGFE 405
>gi|443686468|gb|ELT89736.1| hypothetical protein CAPTEDRAFT_156845 [Capitella teleta]
Length = 257
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 49/86 (56%), Gaps = 4/86 (4%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKA 166
S +++ L+RNVN+ H+ EIFS +G V VE+++DR RG YV ++ DAEKA
Sbjct: 88 SCKVHVARLTRNVNKEHVTEIFSVYGTVKHVEMLVDRFHPEFCRGFAYVEYENADDAEKA 147
Query: 167 QLYMDGFH---RLQSLLQLLQREIVR 189
+MDG + + +L + VR
Sbjct: 148 VKHMDGGQIDGQEVTAATVLTQRPVR 173
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 52.0 bits (123), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ LY+ SL N+ E LR IF FG V V+L D N +G G+V F+ A++A
Sbjct: 280 MKLYVGSLHYNITEPMLRAIFEPFGTVESVQLQYDSETNRSKGFGFVNFREAGAAKRAME 339
Query: 169 YMDGFH 174
M+GF
Sbjct: 340 QMNGFE 345
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 9/111 (8%)
Query: 65 SRSRSPPPQR-------NKSPAVAARRGRSPAPPSKRASSPPRKASTEND--SLVLYIDS 115
+RSRSP R N+SP R R+ A + + P TE+D +++
Sbjct: 127 ARSRSPRRDRADDRFTRNRSPVSQRDRRRNGADDRRLSRKTPEPEVTEDDRDKRTIFVQQ 186
Query: 116 LSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S+ HLR F G VV+ ++V DR +G GYV FK KA
Sbjct: 187 ISQRAETRHLRSFFETVGPVVEAQIVKDRVTGRSKGVGYVEFKEEESVPKA 237
>gi|328850756|gb|EGF99917.1| hypothetical protein MELLADRAFT_118186 [Melampsora larici-populina
98AG31]
Length = 667
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 3/76 (3%)
Query: 100 RKASTEN---DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
+KA T++ D L++ LS NV++ L++ F FGEV+ ++ +R +G GYV
Sbjct: 389 KKAKTDDASGDIKNLFVGGLSWNVDDDWLKKEFEKFGEVISARVITERGTERSKGFGYVD 448
Query: 157 FKTRADAEKAQLYMDG 172
F + DA KA M G
Sbjct: 449 FASPEDARKAVEAMAG 464
>gi|339237675|ref|XP_003380392.1| RNA-binding protein 39 [Trichinella spiralis]
gi|316976770|gb|EFV59992.1| RNA-binding protein 39 [Trichinella spiralis]
Length = 680
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 1/84 (1%)
Query: 92 SKRASSPPRKASTENDS-LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
++ AS+ A T+N + LY+ SL N+ E LR IF FG++ ++L+ D + R
Sbjct: 309 NRMASAMLATAFTQNRGPMKLYVGSLHFNITEEMLRGIFEPFGKIESIQLLKDPETSRSR 368
Query: 151 GSGYVRFKTRADAEKAQLYMDGFH 174
G G++ F DA++A ++GF
Sbjct: 369 GYGFITFYNSEDAKRAMEQLNGFE 392
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 45/106 (42%), Gaps = 14/106 (13%)
Query: 66 RSRSPPP-QRNKSPAVAARRGRSPAPPSKRA-------SSPPRK------ASTENDSLVL 111
RSRSPPP R P G+ P +R SPPR + E D+ +
Sbjct: 172 RSRSPPPYTRGGKPGEGLSSGKKLPGPERRDVMPFTPRYSPPRNYVDSELSPEERDARTV 231
Query: 112 YIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+ L+R++ L E FS +V DV ++ D +G YV F
Sbjct: 232 FCMQLARSIRPRDLEEFFSEVAKVRDVRIITDSKTRRSKGIAYVEF 277
>gi|348673056|gb|EGZ12875.1| hypothetical protein PHYSODRAFT_257219 [Phytophthora sojae]
Length = 570
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 50/87 (57%), Gaps = 10/87 (11%)
Query: 88 PAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN 147
PA + +SS P E + L +++L+RNVN HLREIF FG VV V++ + R
Sbjct: 317 PADAKRSSSSKP-----EPKPVSLRVENLTRNVNADHLREIFGKFGLVVRVDMAVPRG-- 369
Query: 148 LPRGSGYVRFKTRADAEKAQLYM-DGF 173
+ S V F ++ DA+ A+ +M DG+
Sbjct: 370 --KASAVVVFASQQDADSAKDHMHDGW 394
>gi|388512901|gb|AFK44512.1| unknown [Medicago truncatula]
Length = 144
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ LS+ LRE F FGEVV +V DR +G G+V++ T DA K
Sbjct: 50 STNLFVSGLSKRTTTETLREAFQKFGEVVHARVVTDRVSGYSKGFGFVKYATLEDAAKGI 109
Query: 168 LYMDG 172
MDG
Sbjct: 110 EGMDG 114
>gi|317027210|ref|XP_003188595.1| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 536
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 96 SSPPRKASTEN----DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
S+ P+K+ TE+ S L++ +LS NV+E L+ F +FGE+ V ++ +R RG
Sbjct: 268 SATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRG 327
Query: 152 SGYVRFKTRADAEKA 166
GYV + DA KA
Sbjct: 328 FGYVEYTNAVDAAKA 342
>gi|317027208|ref|XP_001400395.2| nucleolin protein Nsr1 [Aspergillus niger CBS 513.88]
Length = 539
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 96 SSPPRKASTEN----DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
S+ P+K+ TE+ S L++ +LS NV+E L+ F +FGE+ V ++ +R RG
Sbjct: 271 SATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRG 330
Query: 152 SGYVRFKTRADAEKA 166
GYV + DA KA
Sbjct: 331 FGYVEYTNAVDAAKA 345
>gi|134057335|emb|CAK44534.1| unnamed protein product [Aspergillus niger]
Length = 538
Score = 51.6 bits (122), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 10/86 (11%)
Query: 91 PSKR------ASSPPRKASTEN----DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVEL 140
PSK+ S+ P+K+ TE+ S L++ +LS NV+E L+ F +FGE+ V +
Sbjct: 259 PSKKRKAEEETSATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRI 318
Query: 141 VMDRAVNLPRGSGYVRFKTRADAEKA 166
+ +R RG GYV + DA KA
Sbjct: 319 MTERDTGRSRGFGYVEYTNAVDAAKA 344
>gi|440577321|emb|CCI55328.1| PH01B001I13.24 [Phyllostachys edulis]
Length = 196
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 7/82 (8%)
Query: 93 KRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGS 152
+R SPP + + + L+I+ LS E LR F FG++ +V LVMDR PRG
Sbjct: 104 RRMRSPP----SLHAHVALFIEGLSFRTTEESLRSAFERFGQLTEVNLVMDRVAKRPRGF 159
Query: 153 GYVRFKTRADAEKAQLYMDGFH 174
++ + A+ E+++ M+G H
Sbjct: 160 AFLSY---ANEEESKNAMEGMH 178
>gi|358367745|dbj|GAA84363.1| hypothetical protein AKAW_02478 [Aspergillus kawachii IFO 4308]
Length = 546
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 4/75 (5%)
Query: 96 SSPPRKASTEN----DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
S+ P+K+ TE+ S L++ +LS NV+E L+ F +FGE+ V ++ +R RG
Sbjct: 278 SATPKKSKTEDPAPGASANLFVGNLSWNVDEAWLQSEFESFGELSGVRIMTERDTGRSRG 337
Query: 152 SGYVRFKTRADAEKA 166
GYV + DA KA
Sbjct: 338 FGYVEYTNAVDAAKA 352
>gi|303321732|ref|XP_003070860.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240110557|gb|EER28715.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320040347|gb|EFW22280.1| hypothetical protein CPSG_00179 [Coccidioides posadasii str.
Silveira]
Length = 498
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S L++ +LS NV+E LR F +FGE+ V +V DR RG GYV F DA KA
Sbjct: 262 ESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKA 321
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
RA S + S E+D+L +I ++S N +E ++E FS+ G ++ + L D P+G G
Sbjct: 356 RAKSFGDQTSPESDTL--FIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFG 413
Query: 154 YVRFKTRADAEKAQLYMDGFHRLQ 177
YV+F + +A A F+ LQ
Sbjct: 414 YVQFSSVDEARSA------FNALQ 431
>gi|119195917|ref|XP_001248562.1| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
gi|392862234|gb|EAS37139.2| hypothetical protein CIMG_02333 [Coccidioides immitis RS]
Length = 496
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S L++ +LS NV+E LR F +FGE+ V +V DR RG GYV F DA KA
Sbjct: 260 ESSNLFVGNLSWNVDEEWLRSEFESFGELSGVRIVTDRDSGRSRGFGYVEFTNAEDASKA 319
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 8/84 (9%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
RA S + S E+D+L +I ++S N +E ++E FS+ G ++ + L D P+G G
Sbjct: 354 RAKSFGDQTSPESDTL--FIGNISFNADENAVQETFSSHGSILGIRLPTDPESGRPKGFG 411
Query: 154 YVRFKTRADAEKAQLYMDGFHRLQ 177
YV+F + +A A F+ LQ
Sbjct: 412 YVQFSSVDEARSA------FNALQ 429
>gi|339232554|ref|XP_003381394.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316979819|gb|EFV62552.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 273
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L + +L++NV + H+ EIFS +G + V++ + + N+ RG +V++++ DAEKAQ +M
Sbjct: 163 LRVGNLTKNVTKDHVFEIFSVYGPLKSVDMPLGK-FNINRGFAFVQYESGEDAEKAQKHM 221
Query: 171 DG 172
DG
Sbjct: 222 DG 223
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 49/108 (45%), Gaps = 5/108 (4%)
Query: 65 SRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGH 124
SRS SPP R + R P S+R S P + E D +++ L+ +
Sbjct: 177 SRSPSPPNDRYRDEDYFQR----DPPQSRRRESSPHYSEEERDRRTVFVTQLANRLTTHE 232
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
LRE F G V D ++V DR +G YV F+ R D+ + L + G
Sbjct: 233 LREFFEQAGAVRDAQIVRDRVTGRSKGVAYVEFR-REDSVQVALTLSG 279
>gi|330791359|ref|XP_003283761.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
gi|325086384|gb|EGC39775.1| hypothetical protein DICPUDRAFT_74732 [Dictyostelium purpureum]
Length = 630
Score = 51.2 bits (121), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 13 SRSASGSSSRSRSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPP 72
SR S R R + S S+S++ S+ + +S SS SPS +++ +
Sbjct: 128 SRDKDYSRDRDRESTSRSRHSDSASKNRDSKEKEISNGNKPSSVESPSLTSSKETNG--- 184
Query: 73 QRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNF 132
++ S ++++ P P E+D +++ +S+NV + L ++FS
Sbjct: 185 -KDTSSSLSSSTSTLPEP------------DEESDQRTVFVSKISQNVVDKDLYDLFSKA 231
Query: 133 GEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL----YMDG 172
G+V+ V+L++D+ +G GYV F + E+A Y+DG
Sbjct: 232 GKVLGVQLIVDKVTKKNKGVGYVEFAEKVMVERAVALSGSYLDG 275
>gi|326434197|gb|EGD79767.1| hypothetical protein PTSG_10752 [Salpingoeca sp. ATCC 50818]
Length = 328
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ L+ NVN HL+EIFS +G VV++++ +R R YV + DA+KA +M
Sbjct: 83 LYVGKLTGNVNSEHLKEIFSLYGRVVNIDMPTNRGGG-SRHFAYVEYDVPEDADKALEHM 141
Query: 171 DG 172
DG
Sbjct: 142 DG 143
>gi|226288243|gb|EEH43755.1| 28 kDa ribonucleoprotein [Paracoccidioides brasiliensis Pb18]
Length = 492
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 99 PRKASTE-NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
P+K E + L+I +LS NV+E LR F FGE+ V +V DR +G GYV F
Sbjct: 236 PKKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDTGRSKGFGYVEF 295
Query: 158 KTRADAEKA 166
DA KA
Sbjct: 296 TNAEDAVKA 304
Score = 38.9 bits (89), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 85 GRSPAPPSKRASSPPRKASTEN--DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
RS A P RA S + + +S L+I +++ + +E + E F+ +G ++ V L
Sbjct: 325 ARSNAAPRDRAQSRAQNFGDQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPT 384
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D P+G GYV+F + +A A ++G
Sbjct: 385 DPESGRPKGFGYVQFSSIDEARSAFESLNG 414
>gi|429329604|gb|AFZ81363.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 494
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+YI SL +V E +R IFS+FGE+ +E+ D + N +G +V ++ + A+ A + M
Sbjct: 154 IYIGSLDPDVKEEDIRTIFSSFGEITCIEMPRDPSTNKSKGYCFVEYRKKESADVAIVSM 213
Query: 171 DGFH 174
GF
Sbjct: 214 QGFQ 217
>gi|399218373|emb|CCF75260.1| unnamed protein product [Babesia microti strain RI]
Length = 485
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 113 IDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+DSL N++E LR++F FGE++ VEL D P+G ++ +K ++A +A L MDG
Sbjct: 227 VDSLV-NISENELRQLFVPFGEILSVELHRDPFTGKPKGFAFIEYKRASEAREAMLAMDG 285
Query: 173 FH 174
F
Sbjct: 286 FE 287
>gi|50286801|ref|XP_445830.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525136|emb|CAG58749.1| unnamed protein product [Candida glabrata]
Length = 425
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 45/76 (59%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
S P+KA T+ + +++ LS ++++ L++ F + G VV ++ +R + RG GYV
Sbjct: 164 SSPKKAKTDGEPATVFVGRLSWSIDDEWLKQEFEHIGGVVAARVMYERGTDRSRGYGYVD 223
Query: 157 FKTRADAEKAQLYMDG 172
F+ ++ AEKA M G
Sbjct: 224 FEDKSYAEKAVKEMHG 239
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + ++ EIF FGE++ V + P+G GYV++ + DA+KA
Sbjct: 276 SDTLFLGNLSFNADRDNIYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTSIDDAKKA 334
>gi|195153132|ref|XP_002017483.1| GL22325 [Drosophila persimilis]
gi|198454362|ref|XP_001359563.2| GA14150 [Drosophila pseudoobscura pseudoobscura]
gi|194112540|gb|EDW34583.1| GL22325 [Drosophila persimilis]
gi|198132761|gb|EAL28712.2| GA14150 [Drosophila pseudoobscura pseudoobscura]
Length = 378
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 49/106 (46%), Gaps = 17/106 (16%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLRE 127
R+PPP+R + R S + +++ L+RNV + H+ E
Sbjct: 201 RTPPPKRRERTRSRTP----------------RSRSPTPKPVRIHVGRLTRNVTKDHVFE 244
Query: 128 IFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
IFS+FG+V VE DR N RG YV + T D E A +MDG
Sbjct: 245 IFSSFGDVKSVEFPTDRYHPNFGRGMAYVEYGTAEDCESAMKHMDG 290
>gi|294933970|ref|XP_002780926.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239891073|gb|EER12721.1| serine/arginine rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 235
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 51/101 (50%), Gaps = 2/101 (1%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
A E +S L + +L+ + + H+R +FS +GE+ DV L +D PRG G+V F
Sbjct: 61 ADAEGESCSLIVRNLNYDTSPQHVRSLFSRYGEIRDVYLPLDYNSGRPRGFGFVEFCDPR 120
Query: 162 DAEKAQLYMDGFHRLQSLLQ--LLQREIVRELIMSVLILRR 200
D +A+ MDG + +Q + QR M LI RR
Sbjct: 121 DVVEAKNAMDGKVVDGNAIQVDIAQRGRKSPRTMRRLISRR 161
>gi|119613102|gb|EAW92696.1| hCG2026745, isoform CRA_a [Homo sapiens]
gi|119613103|gb|EAW92697.1| hCG2026745, isoform CRA_a [Homo sapiens]
gi|119613104|gb|EAW92698.1| hCG2026745, isoform CRA_a [Homo sapiens]
Length = 305
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 59/107 (55%), Gaps = 23/107 (21%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLTRNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ ++R +L +G V F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDMPVERMHPHLSKGYACVEFENPDEAEKALKHMDG 225
>gi|291245050|ref|XP_002742404.1| PREDICTED: MGC81970 protein-like isoform 1 [Saccoglossus
kowalevskii]
Length = 556
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ +++L+ D +G G++ F DA+KA +
Sbjct: 258 LYVGSLHFNITEEMLRGIFEPFGKIDNIQLMKDNETGRSKGYGFITFHDAEDAKKALEQL 317
Query: 171 DGFH 174
+GF
Sbjct: 318 NGFE 321
>gi|395743396|ref|XP_002822424.2| PREDICTED: uncharacterized protein LOC100448817 [Pongo abelii]
Length = 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 9/101 (8%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ L +D+L+ + LR +F +G V DV + + PRG +VRF R+DA+ A+
Sbjct: 14 ITLKVDNLTYRTSHDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHHRSDAQDAEA 73
Query: 169 YMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQENP 209
MD L RE+ + M++ R + ++ QE P
Sbjct: 74 AMD-------RAMLDGREL--RVQMALYGRRDLPRSSQEEP 105
>gi|99029149|gb|ABF60862.1| GRSF [Lilium longiflorum]
Length = 207
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 52 SLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVL 111
++S+ R+ R RN + AA RG P P R S P SL +
Sbjct: 76 TMSTVEEAERAVEMLHRYDINGRNLTVNKAAPRGSRPERP--RESDP---------SLRV 124
Query: 112 YIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMD 171
Y+ +L V++ L ++FS G+V+D +V DR RG G+V TR + + A +D
Sbjct: 125 YVGNLPWQVDDSRLEQLFSEHGKVIDARVVYDRQSGRSRGFGFVTLATREEVDDAIAALD 184
Query: 172 G 172
G
Sbjct: 185 G 185
>gi|156087761|ref|XP_001611287.1| splicing factor, CC1-like family protein [Babesia bovis]
gi|154798541|gb|EDO07719.1| splicing factor, CC1-like family protein [Babesia bovis]
Length = 488
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 38/55 (69%)
Query: 119 NVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
+++E +R++FS FG ++ VE++ D NLP G Y++FK ++A++A M+GF
Sbjct: 258 SISEVEIRQMFSPFGNIISVEILRDPHSNLPLGQAYIKFKRTSEAKEAVTAMNGF 312
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 37/81 (45%)
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
R P+P P E D +++ L+ + L+E F G+VVD ++V DR
Sbjct: 135 RRPSPHRGTKRKTPEPTDDERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDRV 194
Query: 146 VNLPRGSGYVRFKTRADAEKA 166
+G GYV FK +KA
Sbjct: 195 SGRSKGVGYVEFKEEESVQKA 215
>gi|281205731|gb|EFA79920.1| putative RNA splicing factor [Polysphondylium pallidum PN500]
Length = 606
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 86 RSPAPPSKRASSPPR---KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
RSP P+ P + E+DS +++ LS + E L E F+ G+V+ V LV+
Sbjct: 192 RSPEKPAAAEPVLPEISPEEQEESDSRTVFVSKLSPKITENDLYEFFAQAGKVLKVSLVI 251
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQL 168
D+ +G GYV F R EKA L
Sbjct: 252 DKITKRLKGVGYVEFSEREMVEKAVL 277
>gi|432858814|ref|XP_004068952.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Oryzias latipes]
Length = 502
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + +++L+MD +G G++ F A+KA +
Sbjct: 227 LYVGSLHFNITEDMLRGIFEPFGRIENIQLMMDSETGRSKGYGFITFSDAECAKKALEQL 286
Query: 171 DGFH 174
+GF
Sbjct: 287 NGFE 290
>gi|345326434|ref|XP_001510704.2| PREDICTED: hypothetical protein LOC100079778 [Ornithorhynchus
anatinus]
Length = 620
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 39/62 (62%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ L + +++ + ++FS +G ++ +++D+ + RG G++RF R +AE+A +
Sbjct: 322 LYVSGLPKTMSQKEMEQLFSQYGRIITSRILVDQVTGVSRGVGFIRFDKRIEAEEAIKGL 381
Query: 171 DG 172
+G
Sbjct: 382 NG 383
>gi|295672357|ref|XP_002796725.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283705|gb|EEH39271.1| 28 kDa ribonucleoprotein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 474
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 32/56 (57%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
L+I +LS NV+E LR F FGE+ V +V DR +G GYV F DA KA
Sbjct: 233 LFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEFTNAEDAVKA 288
Score = 39.7 bits (91), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 46/89 (51%), Gaps = 2/89 (2%)
Query: 86 RSPAPPSKRASSPPRKASTEN--DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
RS A P RA S + + +S L+I +++ + +E + E F+ +G ++ V L D
Sbjct: 310 RSNAAPRDRAQSRAQNFGDQKSPESDTLFIGNIAFSADESMISETFAEYGSILGVRLPTD 369
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
P+G GYV+F + +A A ++G
Sbjct: 370 PESGRPKGFGYVQFSSIDEARSAFESLNG 398
>gi|453089427|gb|EMF17467.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 501
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 93 KRASSPP----RKASTEN--DSLV-LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
++A S P +KA TE+ D++ L+I +LS NV+E L F FGE+ V ++ DR
Sbjct: 217 RKADSEPEETSKKAKTESNPDAVANLFIGNLSWNVDEEWLTREFEEFGELAGVRIITDRD 276
Query: 146 VNLPRGSGYVRFKTRADAEKA 166
+G GYV F DA KA
Sbjct: 277 SGRSKGFGYVEFTNAEDAAKA 297
>gi|225683278|gb|EEH21562.1| nuclear localization sequence-binding protein [Paracoccidioides
brasiliensis Pb03]
Length = 492
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 99 PRKASTE-NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
P+K E + L+I +LS NV+E LR F FGE+ V +V DR +G GYV F
Sbjct: 236 PKKTKVEPTEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSKGFGYVEF 295
Query: 158 KTRADAEKA 166
DA KA
Sbjct: 296 TNAEDAVKA 304
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 85 GRSPAPPSKRASSPPRKASTEN--DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
RS A P RA S + + +S L+I +++ + +E + E F+ +G ++ V L
Sbjct: 325 ARSNAAPRDRAQSRAQNFGDQRSPESDTLFIGNIAFSADENMISETFAEYGSILGVRLPT 384
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D P+G GYV+F + +A A ++G
Sbjct: 385 DPESGRPKGFGYVQFSSIDEARSAFESLNG 414
>gi|322708692|gb|EFZ00269.1| cutinase negative acting protein [Metarhizium anisopliae ARSEF 23]
Length = 509
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 40/76 (52%), Gaps = 1/76 (1%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
P+KA TE + L+ +LS N+++ L E F F +V +V DR RG GYV F+
Sbjct: 251 PKKAKTEG-APTLFAGNLSWNIDDNALAEAFKEFEGLVGARVVTDRDGGRSRGFGYVDFE 309
Query: 159 TRADAEKAQLYMDGFH 174
T A KA M GF
Sbjct: 310 TPEAATKAYEAMQGFE 325
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
++PP E D +++ L+ + L+ F G VV+ ++V DR +G GYV
Sbjct: 199 ATPPELDQEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYV 258
Query: 156 RFKTRADAEKA-QLYMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQENPLPVGS 214
F +KA +L + ++QL + E R+ S GQ Q N +P
Sbjct: 259 EFADEESVQKALELTGQKLMNIPIIVQLTEAEKNRQARTS------EGQPTQSNGIPF-- 310
Query: 215 HPPRHGGDLLDLEEVDLRD 233
H G +EE DLRD
Sbjct: 311 HRLYVGNIHFSIEESDLRD 329
>gi|238505292|ref|XP_002383875.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|317151540|ref|XP_001824733.2| nucleolin protein Nsr1 [Aspergillus oryzae RIB40]
gi|220689989|gb|EED46339.1| nucleolin protein Nsr1, putative [Aspergillus flavus NRRL3357]
gi|391872083|gb|EIT81226.1| nuclear localization sequence binding protein [Aspergillus oryzae
3.042]
Length = 525
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 96 SSPPRKASTEN----DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
S+ P+K TE S L++ +LS NV+E L+ F FGE+ V ++ +R RG
Sbjct: 263 SATPKKTKTEEPAAGASANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRG 322
Query: 152 SGYVRFKTRADAEKA 166
GYV + DA KA
Sbjct: 323 FGYVEYTNAVDAAKA 337
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
RA S +AS E+D+L ++ ++ + NE L E+F G ++ + L D P+G G
Sbjct: 375 RARSFGDQASPESDTL--FVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFG 432
Query: 154 YVRFKTRADAEKAQLYMDG 172
YV+F + +A +A ++G
Sbjct: 433 YVQFSSVEEAREAFNELNG 451
>gi|147900472|ref|NP_001086350.1| MGC81970 protein [Xenopus laevis]
gi|49522239|gb|AAH75146.1| MGC81970 protein [Xenopus laevis]
Length = 512
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 225 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 284
Query: 171 DGFH 174
+GF
Sbjct: 285 NGFE 288
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 6/80 (7%)
Query: 83 RRGRSPAPPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVD 137
+R +S +PP KR SP R + E DS ++ L+ + L E FS G+V D
Sbjct: 96 KRSKSRSPP-KREKSPVRGPIDNLSPEERDSRTVFCMQLAARIRPRDLEEFFSTVGKVRD 154
Query: 138 VELVMDRAVNLPRGSGYVRF 157
V ++ DR +G YV F
Sbjct: 155 VRMISDRNSRRSKGIAYVEF 174
>gi|83773473|dbj|BAE63600.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 440
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 96 SSPPRKASTEN----DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
S+ P+K TE S L++ +LS NV+E L+ F FGE+ V ++ +R RG
Sbjct: 178 SATPKKTKTEEPAAGASANLFVGNLSWNVDEAWLQSEFEEFGELSGVRIMTERDTGRSRG 237
Query: 152 SGYVRFKTRADAEKA 166
GYV + DA KA
Sbjct: 238 FGYVEYTNAVDAAKA 252
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
RA S +AS E+D+L ++ ++ + NE L E+F G ++ + L D P+G G
Sbjct: 290 RARSFGDQASPESDTL--FVGNIPFSANEDSLHEVFGQKGSILGIRLPTDPESGRPKGFG 347
Query: 154 YVRFKTRADAEKAQLYMDG 172
YV+F + +A +A ++G
Sbjct: 348 YVQFSSVEEAREAFNELNG 366
>gi|315046452|ref|XP_003172601.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
gi|311342987|gb|EFR02190.1| hypothetical protein MGYG_05193 [Arthroderma gypseum CBS 118893]
Length = 481
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 33/62 (53%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
E S L+ +LS NV+E LR F FGE+V +V DR RG GYV F DA
Sbjct: 234 EGASANLFAGNLSWNVDEEWLRSEFEEFGELVGTRIVTDRESGRSRGFGYVEFANVEDAV 293
Query: 165 KA 166
KA
Sbjct: 294 KA 295
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 5/81 (6%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
RA S + S E+D+L +I ++S + +E ++E+FS +G + + L D P+G G
Sbjct: 331 RAKSFGDQTSPESDTL--FIGNISFSADESMVQELFSKYGSIQGIRLPTDPESGRPKGFG 388
Query: 154 YVRFKTRADAEKAQLYMDGFH 174
YV+F + ++A+ M+ H
Sbjct: 389 YVQFSS---VDEARAAMEAEH 406
>gi|62857615|ref|NP_001016788.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|62201342|gb|AAH93451.1| RNA binding motif protein 39 [Xenopus (Silurana) tropicalis]
gi|89273890|emb|CAJ83908.1| RNA-binding region (RNP1, RRM) containing 2 [Xenopus (Silurana)
tropicalis]
Length = 542
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 253 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 312
Query: 171 DGFH 174
+GF
Sbjct: 313 NGFE 316
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 36/83 (43%), Gaps = 5/83 (6%)
Query: 80 VAARRGRSPAPPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGE 134
V RR P KR SP R + E D+ ++ L+ + L E FS G+
Sbjct: 120 VKLRRRSKSKSPQKREKSPVRGPIDNLSPEERDARTVFCMQLAARIRPRDLEEFFSTVGK 179
Query: 135 VVDVELVMDRAVNLPRGSGYVRF 157
V DV ++ DR +G YV F
Sbjct: 180 VRDVRMISDRNSRRSKGIAYVEF 202
>gi|295671885|ref|XP_002796489.1| hypothetical protein PAAG_01497 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226283469|gb|EEH39035.1| hypothetical protein PAAG_01497 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 345
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
P + + S + ++ L++NVNE HLREIF +GE+ ++EL M+ RG+ Y+
Sbjct: 104 PSRGTPPRTSSKIVVEKLTKNVNENHLREIFGVYGEIQNLELPMNPQFMTNRGTAYI 160
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 87 SPAPPSKR-----ASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
+PAP ++ A S P AS + +++ LS NV+ L+ F GEVV +
Sbjct: 273 APAPKKQKLTNGDAVSAPVPASNDEAVTTIFVGRLSWNVDNDWLKSEFEECGEVVSARVQ 332
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
MDR RG GYV F T DA +A L + G
Sbjct: 333 MDRNTGKSRGFGYVEF-TSPDAVEAALKLTG 362
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS + +E L E F+++G+V V + DR P+G YV F A+KA
Sbjct: 399 SSTLFVGNLSFSASEDVLWEAFASYGDVKGVRMPTDRETGQPKGFAYVDFTDIESAKKA 457
>gi|47223170|emb|CAG11305.1| unnamed protein product [Tetraodon nigroviridis]
Length = 515
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++L+MD +G G++ F A+KA +
Sbjct: 246 LYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQL 305
Query: 171 DGFH 174
+GF
Sbjct: 306 NGFE 309
>gi|225681356|gb|EEH19640.1| hypothetical protein PABG_01899 [Paracoccidioides brasiliensis
Pb03]
Length = 303
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
+PPR +S + ++ L++NVNE HLREIF +GE+ +EL M+ RG+ Y+
Sbjct: 110 TPPRTSSK------IVVEKLTKNVNENHLREIFGVYGEIQSLELPMNPQFMTNRGTAYI 162
>gi|410899827|ref|XP_003963398.1| PREDICTED: RNA-binding protein 39-like [Takifugu rubripes]
Length = 500
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++L+MD +G G++ F A+KA +
Sbjct: 231 LYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQL 290
Query: 171 DGFH 174
+GF
Sbjct: 291 NGFE 294
>gi|395505312|ref|XP_003756986.1| PREDICTED: RNA-binding protein 39 [Sarcophilus harrisii]
Length = 557
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 285 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 344
Query: 171 DGFH 174
+GF
Sbjct: 345 NGFE 348
>gi|62122939|ref|NP_001014392.1| RNA binding motif protein 39b [Danio rerio]
gi|61402832|gb|AAH91794.1| RNA binding motif protein 39b [Danio rerio]
Length = 539
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ LY+ SL N+ E LR IF FG++ ++L+MD +G G++ F A+KA
Sbjct: 264 MRLYVGSLHFNITEDMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALE 323
Query: 169 YMDGFH 174
++GF
Sbjct: 324 QLNGFE 329
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 12/103 (11%)
Query: 61 RSTNSRSRSPPP-QRNKSPAVAARRGRSPAPPSKRASSPPRK-----ASTENDSLVLYID 114
+ + RSRS P ++ KSP + P K+ SP R+ + E D+ ++
Sbjct: 119 KHSRKRSRSKSPFKKEKSPF------KKDKSPFKKDKSPVRQPIDNLSPEERDARTVFCM 172
Query: 115 SLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
L+ + L + FS G+V DV ++ DR +G YV F
Sbjct: 173 QLAARIRPRDLEDFFSAVGKVRDVRMISDRNSRRSKGIAYVEF 215
>gi|119589356|gb|EAW68950.1| ELAV (embryonic lethal, abnormal vision, Drosophila)-like 1 (Hu
antigen R), isoform CRA_b [Homo sapiens]
Length = 445
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LYI L R + + + ++FS FG +++ +++D+ L RG ++RF R++AE+A
Sbjct: 227 LYISGLPRTMTQKDVEDMFSRFGRIINSRVLVDQTTGLSRGVAFIRFDKRSEAEEAITSF 286
Query: 171 DG 172
+G
Sbjct: 287 NG 288
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 55/104 (52%), Gaps = 7/104 (6%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L ++ L +N+ + LR +FS+ GEV +L+ D+ G G+V + T DAE+A +
Sbjct: 141 LIVNYLPQNMTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINTL 200
Query: 171 DGFHRLQSLLQLLQR-----EIVRELIMSVLIL-RRMGQNDQEN 208
+G RLQS + E++++ + + L R M Q D E+
Sbjct: 201 NGL-RLQSKTIKVSYARPSSEVIKDANLYISGLPRTMTQKDVED 243
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
++I +L ++ +EG L ++F FG V +V+++ D N +G G+V +A A
Sbjct: 363 WCIFIYNLGQDADEGILWQMFGPFGAVTNVKVIRDFNTNKCKGFGFVTMTNYEEAAMAIA 422
Query: 169 YMDGFHRLQSLLQL 182
++G+ +LQ+
Sbjct: 423 SLNGYRLGDKILQV 436
>gi|115449135|ref|NP_001048347.1| Os02g0788400 [Oryza sativa Japonica Group]
gi|47497762|dbj|BAD19862.1| putative initiation factor 3g [Oryza sativa Japonica Group]
gi|113537878|dbj|BAF10261.1| Os02g0788400 [Oryza sativa Japonica Group]
gi|125583954|gb|EAZ24885.1| hypothetical protein OsJ_08663 [Oryza sativa Japonica Group]
gi|215737185|dbj|BAG96114.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765721|dbj|BAG87418.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218191717|gb|EEC74144.1| hypothetical protein OsI_09223 [Oryza sativa Indica Group]
Length = 289
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 70/160 (43%), Gaps = 8/160 (5%)
Query: 21 SRSRSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRS----TNSRSRSPPPQRNK 76
S++ S SG S S ++ R+ + +S P + T + PP
Sbjct: 114 SKAEEPSASGDPLASKSGAVLMVCRTCGKKGDHWTSKCPYKDLAPQTEAFVDRPPTADGS 173
Query: 77 SPAVAARRGRSPAPPSKRASSPPR---KASTENDSLVLYIDSLSRNVNEGHLREIFSNFG 133
P A +G + PPS R+ + R ND + + +LS + E L E+F FG
Sbjct: 174 GPPGGAVKG-AYVPPSMRSGAVDRVGHDMRRRNDENSVRVTNLSEDTREPDLLELFRTFG 232
Query: 134 EVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
V V + +D+ RG G+V F R DAEKA ++G+
Sbjct: 233 PVSRVYVAVDQKTGASRGFGFVNFVHREDAEKAISKLNGY 272
>gi|148226721|ref|NP_001086950.1| RNA binding motif protein 39 [Xenopus laevis]
gi|50414893|gb|AAH77813.1| Rnpc2-prov protein [Xenopus laevis]
Length = 540
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 251 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 310
Query: 171 DGFH 174
+GF
Sbjct: 311 NGFE 314
>gi|327271618|ref|XP_003220584.1| PREDICTED: RNA-binding protein 39-like [Anolis carolinensis]
Length = 578
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 308 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 367
Query: 171 DGFH 174
+GF
Sbjct: 368 NGFE 371
>gi|190402270|gb|ACE77680.1| RNA binding motif protein 39 isoform a (predicted) [Sorex araneus]
Length = 435
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|242036887|ref|XP_002465838.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
gi|241919692|gb|EER92836.1| hypothetical protein SORBIDRAFT_01g046740 [Sorghum bicolor]
Length = 541
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
LY+ +L N+NE LR++F FG+V V+L +D L +G G+V+F DA+ AQ
Sbjct: 269 LYVGNLHSNINEDQLRQVFEPFGQVELVQLPLDPLTGLCKGFGFVQFVRLEDAKAAQ 325
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
E D ++ LS +E + E FS G+V DV L+MDR +G GY+ F
Sbjct: 166 ERDQRTVFAFQLSLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEF 218
>gi|348503003|ref|XP_003439056.1| PREDICTED: RNA-binding protein 39-like [Oreochromis niloticus]
Length = 498
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++L+MD +G G++ F A+KA +
Sbjct: 229 LYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQL 288
Query: 171 DGFH 174
+GF
Sbjct: 289 NGFE 292
>gi|326931688|ref|XP_003211958.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like
[Meleagris gallopavo]
Length = 571
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 301 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 360
Query: 171 DGFH 174
+GF
Sbjct: 361 NGFE 364
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 54/122 (44%), Gaps = 18/122 (14%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
SPP E D +++ L+ + L+E F G V + ++V DR N +G GYV
Sbjct: 167 SPPPLTEDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVE 226
Query: 157 FKTRADAEKAQLYMDGFHRLQ--SLLQLLQREIVRELIMSVLILRRMGQNDQENPLPVGS 214
FK D+ +A L + G L ++QL + E R++ NP G+
Sbjct: 227 FKNE-DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQV---------------RNPDATGN 270
Query: 215 HP 216
HP
Sbjct: 271 HP 272
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 280 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKD-DTGRSRGYGFVQFRDATQAREALEKM 338
Query: 171 DGF 173
+GF
Sbjct: 339 NGF 341
>gi|297701877|ref|XP_002827924.1| PREDICTED: uncharacterized protein LOC100439801 isoform 2 [Pongo
abelii]
Length = 287
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 57/130 (43%), Gaps = 13/130 (10%)
Query: 50 SRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDS- 108
+R S + PS + R R P +R +P A G S R S PP +A +
Sbjct: 20 ARPCCSLARPS-PVSPRGRQLPKRRGVAPPRAEDTGDS-----SRGSGPPLRAMSYGRPP 73
Query: 109 ------LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
L +D+L+ + LR +F +G V DV + DR RG +VRF + D
Sbjct: 74 PDVEGMTSLKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRD 133
Query: 163 AEKAQLYMDG 172
AE A MDG
Sbjct: 134 AEDAMDAMDG 143
>gi|431894348|gb|ELK04148.1| RNA-binding protein 39 [Pteropus alecto]
Length = 601
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 329 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 388
Query: 171 DGFH 174
+GF
Sbjct: 389 NGFE 392
>gi|209154564|gb|ACI33514.1| RNA-binding protein 39 [Salmo salar]
Length = 525
Score = 49.7 bits (117), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++L+MD +G G++ F A+KA +
Sbjct: 251 LYVGSLHFNITEEMLRGIFEPFGKIESIQLMMDSETGRSKGYGFITFSDTECAKKALDQL 310
Query: 171 DGF 173
+GF
Sbjct: 311 NGF 313
>gi|403281374|ref|XP_003932163.1| PREDICTED: RNA-binding protein 39 [Saimiri boliviensis boliviensis]
Length = 502
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|349604477|gb|AEQ00017.1| RNA-binding protein 39-like protein, partial [Equus caballus]
Length = 374
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 235 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 294
Query: 171 DGFH 174
+GF
Sbjct: 295 NGFE 298
>gi|417411155|gb|JAA52027.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 491
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 219 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 278
Query: 171 DGFH 174
+GF
Sbjct: 279 NGFE 282
>gi|118100450|ref|XP_425690.2| PREDICTED: RNA-binding protein 39 [Gallus gallus]
gi|363741409|ref|XP_003642487.1| PREDICTED: RNA-binding protein 39-like [Gallus gallus]
Length = 522
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|410953912|ref|XP_003983612.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39 [Felis
catus]
Length = 523
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 251 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 310
Query: 171 DGFH 174
+GF
Sbjct: 311 NGFE 314
>gi|426241404|ref|XP_004014581.1| PREDICTED: RNA-binding protein 39 isoform 2 [Ovis aries]
Length = 524
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|224077247|ref|XP_002192236.1| PREDICTED: RNA-binding protein 39 [Taeniopygia guttata]
Length = 522
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|148674239|gb|EDL06186.1| RNA binding motif protein 39, isoform CRA_d [Mus musculus]
Length = 507
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 235 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 294
Query: 171 DGFH 174
+GF
Sbjct: 295 NGFE 298
>gi|417411216|gb|JAA52053.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Desmodus rotundus]
Length = 499
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 221 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 280
Query: 171 DGFH 174
+GF
Sbjct: 281 NGFE 284
>gi|296199709|ref|XP_002747282.1| PREDICTED: RNA-binding protein 39 isoform 5 [Callithrix jacchus]
Length = 504
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 226 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 285
Query: 171 DGFH 174
+GF
Sbjct: 286 NGFE 289
>gi|281346065|gb|EFB21649.1| hypothetical protein PANDA_004543 [Ailuropoda melanoleuca]
Length = 497
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 219 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 278
Query: 171 DGFH 174
+GF
Sbjct: 279 NGFE 282
>gi|194386036|dbj|BAG59582.1| unnamed protein product [Homo sapiens]
Length = 503
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 225 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 284
Query: 171 DGFH 174
+GF
Sbjct: 285 NGFE 288
>gi|193785136|dbj|BAG54289.1| unnamed protein product [Homo sapiens]
Length = 506
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 228 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 287
Query: 171 DGFH 174
+GF
Sbjct: 288 NGFE 291
>gi|126291195|ref|XP_001371651.1| PREDICTED: RNA-binding protein 39 isoform 1 [Monodelphis domestica]
Length = 524
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|344304396|gb|EGW34628.1| hypothetical protein SPAPADRAFT_57674 [Spathaspora passalidarum
NRRL Y-27907]
Length = 414
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 100 RKASTE--NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+KA T+ ++ L++ LS N+++ L+ F + G V+ ++M+R+ RG GYV F
Sbjct: 164 KKARTDETDEPATLFVGRLSWNIDDEWLKREFEHIGGVIGARVIMERSTGKSRGYGYVDF 223
Query: 158 KTRADAEKAQLYMDG 172
+ AEKA + M G
Sbjct: 224 DNKDSAEKALVEMQG 238
Score = 38.1 bits (87), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 44/101 (43%), Gaps = 16/101 (15%)
Query: 72 PQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSN 131
P +KS A + G +P+ PS L+I +LS N +L EIF
Sbjct: 255 PHASKSNDRAKQFGDTPSAPSD----------------TLFIGNLSFNAQRDNLFEIFGQ 298
Query: 132 FGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
G V+ + P+G GYV+F + +A+ A ++G
Sbjct: 299 HGTVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNG 339
>gi|4757926|ref|NP_004893.1| RNA-binding protein 39 isoform b [Homo sapiens]
gi|197097940|ref|NP_001125339.1| RNA-binding protein 39 [Pongo abelii]
gi|149733223|ref|XP_001501876.1| PREDICTED: RNA-binding protein 39 isoform 2 [Equus caballus]
gi|194044529|ref|XP_001925282.1| PREDICTED: RNA-binding protein 39 isoform 2 [Sus scrofa]
gi|296199701|ref|XP_002747278.1| PREDICTED: RNA-binding protein 39 isoform 1 [Callithrix jacchus]
gi|301762104|ref|XP_002916459.1| PREDICTED: RNA-binding protein 39-like [Ailuropoda melanoleuca]
gi|332858226|ref|XP_514808.3| PREDICTED: uncharacterized protein LOC458443 isoform 5 [Pan
troglodytes]
gi|344279921|ref|XP_003411734.1| PREDICTED: RNA-binding protein 39 isoform 2 [Loxodonta africana]
gi|345789988|ref|XP_865124.2| PREDICTED: RNA-binding protein 39 isoform 12 [Canis lupus
familiaris]
gi|354477984|ref|XP_003501197.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Cricetulus
griseus]
gi|426391509|ref|XP_004062115.1| PREDICTED: RNA-binding protein 39 isoform 2 [Gorilla gorilla
gorilla]
gi|75070825|sp|Q5RC80.1|RBM39_PONAB RecName: Full=RNA-binding protein 39; AltName: Full=RNA-binding
motif protein 39
gi|405192|gb|AAA16346.1| splicing factor [Homo sapiens]
gi|55727753|emb|CAH90627.1| hypothetical protein [Pongo abelii]
gi|119596568|gb|EAW76162.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|119596569|gb|EAW76163.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_c [Homo
sapiens]
gi|296480931|tpg|DAA23046.1| TPA: RNA binding motif protein 39 [Bos taurus]
gi|307686241|dbj|BAJ21051.1| RNA binding motif protein 39 [synthetic construct]
gi|344246681|gb|EGW02785.1| RNA-binding protein 39 [Cricetulus griseus]
gi|380783275|gb|AFE63513.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|383408127|gb|AFH27277.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|384939256|gb|AFI33233.1| RNA-binding protein 39 isoform b [Macaca mulatta]
gi|410218748|gb|JAA06593.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255438|gb|JAA15686.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292902|gb|JAA25051.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350855|gb|JAA42031.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350863|gb|JAA42035.1| RNA binding motif protein 39 [Pan troglodytes]
Length = 524
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|119596572|gb|EAW76166.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_e [Homo
sapiens]
Length = 445
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|119596573|gb|EAW76167.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Homo
sapiens]
Length = 423
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|194384132|dbj|BAG64839.1| unnamed protein product [Homo sapiens]
Length = 521
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 243 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 302
Query: 171 DGFH 174
+GF
Sbjct: 303 NGFE 306
>gi|184185564|gb|ACC68962.1| RNA binding motif protein 39 isoform a (predicted) [Rhinolophus
ferrumequinum]
Length = 498
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|121705054|ref|XP_001270790.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
gi|119398936|gb|EAW09364.1| ribonucleoprotein, chloroplast [Aspergillus clavatus NRRL 1]
Length = 514
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 95 ASSPPRKASTEND---SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
AS+P + E + S L+I +LS NV+E LR+ F FGE+ V +V DR RG
Sbjct: 243 ASTPKKSKQAEEETGASANLFIGNLSWNVDEDWLRQEFETFGELSGVRIVTDRDSGRSRG 302
Query: 152 SGYVRF 157
GYV +
Sbjct: 303 FGYVEY 308
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 2/79 (2%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
RA S ++S E+D+L ++ +L + NE ++E+F G +V + L D P+G G
Sbjct: 356 RARSFGDQSSPESDTL--FVGNLPFSANEDSVQELFGEKGSIVGIRLPTDPDSGRPKGFG 413
Query: 154 YVRFKTRADAEKAQLYMDG 172
YV+F + +A +A ++G
Sbjct: 414 YVQFASVDEAREAFNSLNG 432
>gi|52545994|emb|CAH18281.2| hypothetical protein [Homo sapiens]
Length = 513
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 235 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 294
Query: 171 DGFH 174
+GF
Sbjct: 295 NGFE 298
>gi|74179655|dbj|BAE22477.1| unnamed protein product [Mus musculus]
Length = 521
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
>gi|226288484|gb|EEH43996.1| hypothetical protein PADG_00285 [Paracoccidioides brasiliensis
Pb18]
Length = 351
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
P + + S + ++ L++NVNE HLREIF +GE+ +EL M+ RG+ Y+
Sbjct: 108 PSRGTPPRTSSKIVVEKLTKNVNENHLREIFGVYGEIQSLELPMNPQFMTNRGTAYI 164
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 92 SKRASSPPRKASTEN--DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLP 149
S+R ++PP TE+ D +++ +S+ HLR F G VV+ ++V DR
Sbjct: 156 SRRNNTPPEPEVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRS 215
Query: 150 RGSGYVRFK 158
+G GYV FK
Sbjct: 216 KGVGYVEFK 224
>gi|61557287|ref|NP_001013225.1| RNA-binding protein 39 [Rattus norvegicus]
gi|392346874|ref|XP_003749654.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Rattus
norvegicus]
gi|60552170|gb|AAH91394.1| RNA binding motif protein 39 [Rattus norvegicus]
gi|74196119|dbj|BAE32977.1| unnamed protein product [Mus musculus]
gi|149030834|gb|EDL85861.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_f [Rattus
norvegicus]
Length = 524
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 92 SKRASSPPRKASTEN--DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLP 149
S+R ++PP TE+ D +++ +S+ HLR F G VV+ ++V DR
Sbjct: 159 SRRNNTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKDRVTGRS 218
Query: 150 RGSGYVRFK 158
+G GYV FK
Sbjct: 219 KGVGYVEFK 227
>gi|432865706|ref|XP_004070573.1| PREDICTED: RNA-binding protein 39-like [Oryzias latipes]
Length = 516
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++L+MD +G G++ F A+KA +
Sbjct: 248 LYVGSLHFNITEEMLRGIFEPFGKIEGIQLMMDSETGRSKGYGFISFADAECAKKALEQL 307
Query: 171 DGFH 174
+GF
Sbjct: 308 NGFE 311
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 42 SRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRK 101
SRSRS R+ + SP R ++SRSPP ++ RSP +P
Sbjct: 99 SRSRSKDRTGRYKARKSPVRK-RTKSRSPP-----------KKERSPVRQPIDNLTP--- 143
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
E D+ ++ L+ + L + FS G+V DV ++ DR +G Y+ F
Sbjct: 144 --EERDARTVFCMQLAARIRARDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYIEF 197
>gi|126291198|ref|XP_001371677.1| PREDICTED: RNA-binding protein 39 isoform 2 [Monodelphis domestica]
Length = 533
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|88682991|gb|AAI05542.1| RBM39 protein [Bos taurus]
Length = 528
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 256 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 315
Query: 171 DGFH 174
+GF
Sbjct: 316 NGFE 319
>gi|255939157|ref|XP_002560348.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211584970|emb|CAP83009.1| Pc15g01230 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%), Gaps = 13/85 (15%)
Query: 75 NKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGE 134
++ PA AA++ ++ P E S L+I +LS NV+E L+ FS FGE
Sbjct: 231 DEEPAAAAKKSKTEDAP-------------EGASANLFIGNLSWNVDEEWLQREFSEFGE 277
Query: 135 VVDVELVMDRAVNLPRGSGYVRFKT 159
+ V +V DR RG GYV + +
Sbjct: 278 LSGVRIVTDRESGRSRGFGYVEYTS 302
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 104 TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
T +S L++ +L + E L E+F G V+ + L ++ P+G GYV+F + +A
Sbjct: 351 TSPESDTLFVGNLPFSATEDALHEVFGAHGSVLGIRLPTEQETGRPKGFGYVQFSSIDEA 410
Query: 164 EKAQLYMDGFHRLQ 177
+ A ++G H L+
Sbjct: 411 KAAHGALNG-HELE 423
>gi|430812863|emb|CCJ29732.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 229
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 37/58 (63%)
Query: 113 IDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
I+ L++NV H+REIF ++GE+ +++ M+R +N+ RG Y+ + + A A +M
Sbjct: 42 IEKLTKNVTVAHIREIFGSYGEISSIDMPMNRRLNINRGLCYIIYTSSNSANAAISHM 99
>gi|426241410|ref|XP_004014584.1| PREDICTED: RNA-binding protein 39 isoform 5 [Ovis aries]
Length = 530
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 258 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 317
Query: 171 DGFH 174
+GF
Sbjct: 318 NGFE 321
>gi|330688445|ref|NP_001193433.1| RNA-binding protein 39 [Bos taurus]
Length = 530
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 258 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 317
Query: 171 DGFH 174
+GF
Sbjct: 318 NGFE 321
>gi|313244748|emb|CBY15464.1| unnamed protein product [Oikopleura dioica]
Length = 273
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 7/85 (8%)
Query: 89 APPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNL 148
AP +R+ SP + D + + + L+RN+ + HL EIF +G V +VE+ +
Sbjct: 133 APRKRRSPSPAK------DPVRIQVTKLTRNITKDHLSEIFGTYGTVANVEVPGGNGFSF 186
Query: 149 P-RGSGYVRFKTRADAEKAQLYMDG 172
R ++ +++ DA KA +MDG
Sbjct: 187 SFRHQAFIEYESSEDAAKAAKFMDG 211
>gi|194386804|dbj|BAG61212.1| unnamed protein product [Homo sapiens]
Length = 502
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 289
Query: 171 DGFH 174
+GF
Sbjct: 290 NGFE 293
>gi|426241402|ref|XP_004014580.1| PREDICTED: RNA-binding protein 39 isoform 1 [Ovis aries]
Length = 530
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|35493811|ref|NP_909122.1| RNA-binding protein 39 isoform a [Homo sapiens]
gi|281182530|ref|NP_001162566.1| RNA-binding protein 39 [Papio anubis]
gi|284004921|ref|NP_001164806.1| RNA-binding protein 39 [Oryctolagus cuniculus]
gi|149733225|ref|XP_001501869.1| PREDICTED: RNA-binding protein 39 isoform 1 [Equus caballus]
gi|296199703|ref|XP_002747279.1| PREDICTED: RNA-binding protein 39 isoform 2 [Callithrix jacchus]
gi|332858224|ref|XP_003316931.1| PREDICTED: uncharacterized protein LOC458443 isoform 1 [Pan
troglodytes]
gi|335304742|ref|XP_003360012.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|344279919|ref|XP_003411733.1| PREDICTED: RNA-binding protein 39 isoform 1 [Loxodonta africana]
gi|345789986|ref|XP_864959.2| PREDICTED: RNA-binding protein 39 isoform 3 [Canis lupus
familiaris]
gi|354477982|ref|XP_003501196.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Cricetulus
griseus]
gi|397523808|ref|XP_003831910.1| PREDICTED: RNA-binding protein 39 [Pan paniscus]
gi|426391507|ref|XP_004062114.1| PREDICTED: RNA-binding protein 39 isoform 1 [Gorilla gorilla
gorilla]
gi|28201880|sp|Q14498.2|RBM39_HUMAN RecName: Full=RNA-binding protein 39; AltName: Full=Hepatocellular
carcinoma protein 1; AltName: Full=RNA-binding motif
protein 39; AltName: Full=RNA-binding region-containing
protein 2; AltName: Full=Splicing factor HCC1
gi|405194|gb|AAA16347.1| splicing factor [Homo sapiens]
gi|119596565|gb|EAW76159.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|119596567|gb|EAW76161.1| RNA-binding region (RNP1, RRM) containing 2, isoform CRA_a [Homo
sapiens]
gi|146327034|gb|AAI41836.1| RNA binding motif protein 39 [Homo sapiens]
gi|164623752|gb|ABY64678.1| RNA binding motif protein 39, isoform 1 (predicted) [Papio anubis]
gi|165971473|gb|AAI58173.1| RNA binding motif protein 39 [Homo sapiens]
gi|166831598|gb|ABY90123.1| RNA binding motif protein 39 isoform a (predicted) [Callithrix
jacchus]
gi|169731519|gb|ACA64891.1| RNA binding motif protein 39 isoform a (predicted) [Callicebus
moloch]
gi|197215647|gb|ACH53039.1| RNA binding motif protein 39 isoform a (predicted) [Otolemur
garnettii]
gi|217038339|gb|ACJ76632.1| RNA binding motif protein 39 isoform a (predicted) [Oryctolagus
cuniculus]
gi|229368730|gb|ACQ63013.1| RNA binding motif protein 39 isoform a (predicted) [Dasypus
novemcinctus]
gi|351702535|gb|EHB05454.1| RNA-binding protein 39 [Heterocephalus glaber]
gi|380783277|gb|AFE63514.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|383408125|gb|AFH27276.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|384939254|gb|AFI33232.1| RNA-binding protein 39 isoform a [Macaca mulatta]
gi|410218746|gb|JAA06592.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410255434|gb|JAA15684.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292900|gb|JAA25050.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410292904|gb|JAA25052.1| RNA binding motif protein 39 [Pan troglodytes]
gi|410350859|gb|JAA42033.1| RNA binding motif protein 39 [Pan troglodytes]
gi|440902514|gb|ELR53299.1| RNA-binding protein 39 [Bos grunniens mutus]
Length = 530
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|355784531|gb|EHH65382.1| RNA-binding motif protein 39 [Macaca fascicularis]
Length = 530
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
P R +PP E D +++ L+ + L+E F G V + ++V DR N +
Sbjct: 167 PRVRDGTPPPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 226
Query: 151 GSGYVRFKTRADAEKA-QLYMDGFHRLQSLLQLLQREIVREL 191
G GYV FK+ + A QL + ++QL + E R++
Sbjct: 227 GVGYVEFKSEEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQV 268
>gi|336176066|ref|NP_001229529.1| RNA-binding protein 39 isoform d [Homo sapiens]
gi|73991836|ref|XP_865202.1| PREDICTED: RNA-binding protein 39 isoform 16 [Canis lupus
familiaris]
gi|296199705|ref|XP_002747280.1| PREDICTED: RNA-binding protein 39 isoform 3 [Callithrix jacchus]
gi|332858230|ref|XP_003316933.1| PREDICTED: uncharacterized protein LOC458443 isoform 3 [Pan
troglodytes]
gi|335304749|ref|XP_003360015.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719245|ref|XP_003363967.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|426391513|ref|XP_004062117.1| PREDICTED: RNA-binding protein 39 isoform 4 [Gorilla gorilla
gorilla]
Length = 502
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 289
Query: 171 DGFH 174
+GF
Sbjct: 290 NGFE 293
>gi|426241406|ref|XP_004014582.1| PREDICTED: RNA-binding protein 39 isoform 3 [Ovis aries]
Length = 502
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 289
Query: 171 DGFH 174
+GF
Sbjct: 290 NGFE 293
>gi|118403314|ref|NP_573505.2| RNA-binding protein 39 [Mus musculus]
gi|392346872|ref|XP_003749653.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Rattus
norvegicus]
gi|341941811|sp|Q8VH51.2|RBM39_MOUSE RecName: Full=RNA-binding protein 39; AltName: Full=Coactivator of
activating protein 1 and estrogen receptors;
Short=Coactivator of AP-1 and ERs; AltName:
Full=RNA-binding motif protein 39; AltName:
Full=RNA-binding region-containing protein 2; AltName:
Full=Transcription coactivator CAPER
gi|55991480|gb|AAH86645.1| RNA binding motif protein 39 [Mus musculus]
gi|74151058|dbj|BAE27657.1| unnamed protein product [Mus musculus]
gi|148674237|gb|EDL06184.1| RNA binding motif protein 39, isoform CRA_b [Mus musculus]
Length = 530
Score = 49.3 bits (116), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|432101442|gb|ELK29624.1| RNA-binding protein 39 [Myotis davidii]
Length = 491
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 289
Query: 171 DGFH 174
+GF
Sbjct: 290 NGFE 293
>gi|17063213|gb|AAL32373.1| transcription coactivator CAPER [Mus musculus]
Length = 530
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
>gi|242094238|ref|XP_002437609.1| hypothetical protein SORBIDRAFT_10g030460 [Sorghum bicolor]
gi|241915832|gb|EER88976.1| hypothetical protein SORBIDRAFT_10g030460 [Sorghum bicolor]
Length = 223
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 5/112 (4%)
Query: 65 SRSRSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSL----VLYIDSLSRN 119
S SR P R++S + A + RSP P P +A S R E D++ LY+ LS
Sbjct: 14 SYSRGHPKARSRSQSPARSQSRSPVPDPRSQARSRSRSHEREEDAVNRGNTLYVTGLSSR 73
Query: 120 VNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMD 171
V E +++ FS G+VV +V++ + RG +V T +AE+ Y++
Sbjct: 74 VTERDVKDYFSKHGKVVGCHVVLEPHTRVSRGFAFVTMDTVEEAERCIKYLN 125
>gi|336176064|ref|NP_001229528.1| RNA-binding protein 39 isoform c [Homo sapiens]
gi|296199707|ref|XP_002747281.1| PREDICTED: RNA-binding protein 39 isoform 4 [Callithrix jacchus]
gi|332858228|ref|XP_003316932.1| PREDICTED: uncharacterized protein LOC458443 isoform 2 [Pan
troglodytes]
gi|335304745|ref|XP_003360013.1| PREDICTED: RNA-binding protein 39 [Sus scrofa]
gi|338719242|ref|XP_003363966.1| PREDICTED: RNA-binding protein 39 [Equus caballus]
gi|345789990|ref|XP_003433300.1| PREDICTED: RNA-binding protein 39 [Canis lupus familiaris]
gi|426391511|ref|XP_004062116.1| PREDICTED: RNA-binding protein 39 isoform 3 [Gorilla gorilla
gorilla]
gi|124297482|gb|AAI31544.1| RBM39 protein [Homo sapiens]
gi|194389138|dbj|BAG61586.1| unnamed protein product [Homo sapiens]
Length = 508
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 289
Query: 171 DGFH 174
+GF
Sbjct: 290 NGFE 293
>gi|59858555|ref|NP_001012304.1| RNA-binding protein 39 [Danio rerio]
gi|27882534|gb|AAH44487.1| RNA binding motif protein 39a [Danio rerio]
gi|182892014|gb|AAI65689.1| Rbm39a protein [Danio rerio]
Length = 523
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 248 LYVGSLHFNITEDMLRGIFEPFGRIDSIQLMMDSETGRSKGYGFITFSDAECAKKALEQL 307
Query: 171 DGFH 174
+GF
Sbjct: 308 NGFE 311
>gi|426241408|ref|XP_004014583.1| PREDICTED: RNA-binding protein 39 isoform 4 [Ovis aries]
Length = 508
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 230 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALEQL 289
Query: 171 DGFH 174
+GF
Sbjct: 290 NGFE 293
>gi|47212427|emb|CAF93583.1| unnamed protein product [Tetraodon nigroviridis]
Length = 500
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LY+ SL N+ E LR IF FG + +++L++D +G G++ F A+KA
Sbjct: 231 LRLYVGSLHFNITEEMLRGIFEPFGRIENIQLMVDSDTGRSKGYGFITFADAECAKKALE 290
Query: 169 YMDGFH 174
++GF
Sbjct: 291 QLNGFE 296
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
L+I SLS +V E + E F G+V V L DR P+G GYV+F + DA A
Sbjct: 295 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVEDASAALKA 354
Query: 170 MDG 172
M+G
Sbjct: 355 MNG 357
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%), Gaps = 4/73 (5%)
Query: 85 GRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR 144
G S AP K + + +T N +++ LS NV+ L+ F + GEVV +V DR
Sbjct: 174 GESVAPAKKARADDGEEEATTN----VFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDR 229
Query: 145 AVNLPRGSGYVRF 157
RG GYV F
Sbjct: 230 DSQKSRGFGYVEF 242
>gi|154288132|ref|XP_001544861.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150408502|gb|EDN04043.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 500
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
S+P + N+ L+I +LS NV+E LR F FGE+ V +V DR RG GYV
Sbjct: 246 SAPKKTKVDSNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYV 305
Query: 156 RFK 158
F
Sbjct: 306 EFT 308
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 85 GRSPAPPSKRASSPPRK--ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
GRS A P +RA S + T +S L+I +++ + NE + E F+ G ++ V L
Sbjct: 337 GRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPT 396
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D P+G GYV+F + +A A ++G
Sbjct: 397 DPESGRPKGFGYVQFSSVDEARSAFQALNG 426
>gi|392866734|gb|EAS30091.2| hypothetical protein CIMG_12189 [Coccidioides immitis RS]
Length = 323
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 6/88 (6%)
Query: 89 APPSKRASSPPRKASTENDSLV------LYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
P R R S + ++ L++NVNE HLREIF +G++ ++L M
Sbjct: 97 TPSRDRHGGRYRDRSYSRSPSPPRRSTKIVVEKLTKNVNEDHLREIFGAYGDIQSIDLPM 156
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+R RG+ Y+ + ADAE A +M
Sbjct: 157 NRQFMTNRGTAYICYYDAADAESAIAHM 184
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 48/102 (47%), Gaps = 1/102 (0%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
P R +PP E D +++ L+ + L+E F G V + ++V DR N +
Sbjct: 167 PRVRDGTPPPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 226
Query: 151 GSGYVRFKTRADAEKA-QLYMDGFHRLQSLLQLLQREIVREL 191
G GYV FK+ + A QL + ++QL + E R++
Sbjct: 227 GVGYVEFKSEEHVQAALQLTGQKLLGIPVIVQLTEAEKNRQV 268
>gi|209155056|gb|ACI33760.1| RNA-binding protein 39 [Salmo salar]
Length = 535
Score = 48.9 bits (115), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+MD +G G++ F A+KA +
Sbjct: 255 LYVGSLHFNITEDMLRGIFEPFGRIESIQLMMDSETARSKGYGFISFADAECAKKALEQL 314
Query: 171 DGFH 174
+GF
Sbjct: 315 NGFE 318
>gi|226499830|ref|NP_001140942.1| uncharacterized protein LOC100273020 [Zea mays]
gi|194701856|gb|ACF85012.1| unknown [Zea mays]
Length = 473
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 89 APPSKRASSPP----RKASTE--NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
AP ++A P +K+ TE ++S L++ +LS NV+E LR F +FGE+ V ++
Sbjct: 199 APKKRKAEEEPATNAKKSKTESADNSPNLFVGNLSWNVDEEWLRREFESFGELSGVRIMT 258
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQ 167
+R RG GYV + ADA A+
Sbjct: 259 ERETGRSRGFGYVEY---ADASSAK 280
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S L++ +L V+E +RE+F G++ V L D P+G GYV F + +A +A
Sbjct: 329 ESNTLFVGNLVFGVDENAVREVFEGQGQIQGVRLPTDAETGRPKGYGYVEFSSVDEARQA 388
>gi|170031159|ref|XP_001843454.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869230|gb|EDS32613.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 323
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+++ L+RNV + H+ EIF +GE+ V+ +DR + RG YV F AE A +M
Sbjct: 177 IHVGRLTRNVVKDHILEIFGTYGEIRSVDFPVDRFQSFTRGFCYVDFVNPDGAENAIKHM 236
Query: 171 DG 172
DG
Sbjct: 237 DG 238
>gi|66816589|ref|XP_642304.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|74997199|sp|Q54Y98.1|TRA2_DICDI RecName: Full=Transformer-2 protein homolog
gi|60470367|gb|EAL68347.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 326
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/133 (33%), Positives = 63/133 (47%), Gaps = 20/133 (15%)
Query: 54 SSSSSPSRSTNSRSRSPP----------PQRNKSPAVAA--RRGRSPAPPSKR------- 94
S SP R NSR RSPP P R SP RG SP+ KR
Sbjct: 40 SRERSPPRG-NSRERSPPRGGSPNRGGSPNRGGSPNRGGSPNRGGSPSRDDKRRYGNGGN 98
Query: 95 ASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGY 154
+ R A+T + S VL + L+ E L++ FS FG++ V+L+MDR + G+
Sbjct: 99 GETRNRLANTASPSNVLGVFGLAPQTEERDLKDEFSRFGKIDHVDLIMDRKTGRSKCFGF 158
Query: 155 VRFKTRADAEKAQ 167
V F+ + DA +A+
Sbjct: 159 VYFENKEDAVRAK 171
>gi|366987527|ref|XP_003673530.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
gi|342299393|emb|CCC67147.1| hypothetical protein NCAS_0A05890 [Naumovozyma castellii CBS 4309]
Length = 415
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%)
Query: 104 TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
TE + +++ LS ++++ L++ F + G VV ++M+R + RG GYV F+ ++ A
Sbjct: 157 TEGEPATIFVGRLSWSIDDEWLKKEFEHIGGVVSARVIMERGTDRSRGYGYVDFEDKSYA 216
Query: 164 EKAQLYMDG 172
EKA M G
Sbjct: 217 EKAIKEMQG 225
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+FS +GE++ V + P+G GYV++ DA+KA
Sbjct: 261 SETLFLGNLSFNADRDAISELFSKYGEIISVRIPTHPETEQPKGFGYVQYTNVEDAKKA 319
>gi|218195435|gb|EEC77862.1| hypothetical protein OsI_17125 [Oryza sativa Indica Group]
Length = 152
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS E LR F FG++ +V LVM+R PRG ++ + + +++ A M
Sbjct: 72 LYVSGLSFRTTEESLRNAFERFGQLTEVNLVMERVAKRPRGFAFLSYASEEESKNAMEGM 131
Query: 171 DG 172
G
Sbjct: 132 QG 133
>gi|212546733|ref|XP_002153520.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
gi|210065040|gb|EEA19135.1| nucleolin protein Nsr1, putative [Talaromyces marneffei ATCC 18224]
Length = 472
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 89 APPSKRASSPP----RKASTE--NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
AP ++A P +K+ TE ++S L+I +LS N++E LR F +FGE+ V ++
Sbjct: 198 APKKRKAEEEPATSAKKSKTESADNSSNLFIGNLSWNIDEEWLRREFESFGELSGVRIMT 257
Query: 143 DRAVNLPRGSGYVRF 157
+R RG GYV +
Sbjct: 258 ERETGRSRGFGYVEY 272
>gi|353241625|emb|CCA73428.1| related to NSR1-nuclear localization sequence binding protein
[Piriformospora indica DSM 11827]
Length = 657
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+++ LS NV++ L+ F GEVV + MDR +G GYV F T AEKA M
Sbjct: 393 IFVGKLSWNVDDEWLKSEFEACGEVVRASVQMDRQTGRSKGFGYVSFSTPEAAEKAIAEM 452
Query: 171 DG 172
+G
Sbjct: 453 NG 454
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S VL++ ++S N NE L E F G++V V L DR +G GYV F + +A+ A
Sbjct: 488 ESKVLFVGNVSFNANEDMLWETFGEHGDIVSVRLPTDRETGQMKGFGYVEFTSVENAKSA 547
Query: 167 QLYMDG 172
++G
Sbjct: 548 FNALNG 553
>gi|224074970|ref|XP_002194754.1| PREDICTED: serine/arginine-rich splicing factor 2 [Taeniopygia
guttata]
Length = 221
Score = 48.5 bits (114), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|77627748|ref|NP_001029290.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|60414777|sp|Q5R1W5.3|SRSF2_PANTR RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|56342346|dbj|BAD74033.1| arginine/serine-rich 2 splicing factor [Pan troglodytes verus]
Length = 221
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|387018630|gb|AFJ51433.1| Serine/arginine-rich splicing factor 2 [Crotalus adamanteus]
Length = 221
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|426346596|ref|XP_004040962.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 221
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|297301957|ref|XP_001098541.2| PREDICTED: nucleolysin TIAR isoform 5 [Macaca mulatta]
Length = 506
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%)
Query: 95 ASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGY 154
A++P + ++ +++ LS + ++ F+ FG++ D +V D A +G G+
Sbjct: 214 ATTPSSQKKDTSNHFHVFVGDLSPEITTEDIKSAFAPFGKISDARVVKDMATGKSKGYGF 273
Query: 155 VRFKTRADAEKAQLYMDG 172
V F + DAE A ++M G
Sbjct: 274 VSFYNKLDAENAIVHMGG 291
>gi|225560173|gb|EEH08455.1| ribonucleoprotein [Ajellomyces capsulatus G186AR]
Length = 470
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 36/73 (49%)
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
R + ++P + N+ L+I +LS NV+E LR F FGE+ V +V DR
Sbjct: 206 RKAEDEEEEVTAPKKTKVDSNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRD 265
Query: 146 VNLPRGSGYVRFK 158
RG GYV F
Sbjct: 266 SGRSRGFGYVEFT 278
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 85 GRSPAPPSKRASSPPRKASTEN--DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
GRS A P +RA S + + +S L+I +++ + NE + E F+ G ++ V L
Sbjct: 307 GRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPT 366
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D P+G GYV+F + +A A ++G
Sbjct: 367 DPESGRPKGFGYVQFSSVDEARSAFQALNG 396
>gi|397468421|ref|XP_003805885.1| PREDICTED: uncharacterized protein LOC100969202 [Pan paniscus]
Length = 293
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ L +D+L+ + LR +F +G V DV + + PR +VRF R+DA+ A+
Sbjct: 14 ITLKVDNLTYRTSPDSLRRVFEKYGRVGDVYIPREPHTKAPRSFAFVRFHDRSDAQDAEA 73
Query: 169 YMDG 172
MDG
Sbjct: 74 AMDG 77
>gi|62898065|dbj|BAD96972.1| splicing factor, arginine/serine-rich 2 variant [Homo sapiens]
Length = 221
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|426346594|ref|XP_004040961.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 219
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|330802792|ref|XP_003289397.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
gi|325080515|gb|EGC34067.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
Length = 628
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 48/85 (56%), Gaps = 1/85 (1%)
Query: 89 APPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNL 148
+P SK +++ ND+ L++ L +++ +L ++FS +G++ V ++ D+
Sbjct: 492 SPQSKNSTTTTTTKVIPNDT-NLFVFHLPPFIDDAYLFQLFSQYGKLQSVRVITDKDTGE 550
Query: 149 PRGSGYVRFKTRADAEKAQLYMDGF 173
+G G+V+F R DA K Q M+GF
Sbjct: 551 NKGYGFVKFYNREDAFKCQKEMNGF 575
Score = 38.1 bits (87), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
E DS +++ L + + L ++FS +G V+ ++++D N G G+VRF +++
Sbjct: 90 EKDSTNIFVKHLPNDFTDEDLAKLFSAYGNVISSKVMIDPKGN-SYGYGFVRFSNPNESQ 148
Query: 165 KAQLYMDGFH 174
A +DGF
Sbjct: 149 AAIKELDGFQ 158
>gi|326930671|ref|XP_003211466.1| PREDICTED: hypothetical protein LOC100548975 [Meleagris gallopavo]
Length = 239
Score = 48.1 bits (113), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|307195189|gb|EFN77173.1| RNA-binding protein with serine-rich domain 1 [Harpegnathos
saltator]
Length = 249
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 63 TNSRSRSPPPQ--RNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRN 119
+NS P P+ RR RSP P P+K ++I L+RN
Sbjct: 57 SNSVPDKPKPKGRSRSPSPRRKRRERSPIPRPTK-----------------IHIGHLTRN 99
Query: 120 VNEGHLREIFSNFGEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
V + H+ EIFS +G++ V+ MD+ N RG YV F+T +AE A +MDG
Sbjct: 100 VTKEHITEIFSVYGQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENAMKHMDG 153
>gi|47604918|ref|NP_001001305.1| serine/arginine-rich splicing factor 2 [Gallus gallus]
gi|266991|sp|P30352.1|SRSF2_CHICK RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|63752|emb|CAA44306.1| PR 264 [Gallus gallus]
gi|228503|prf||1805195A RNA-binding protein PR264
Length = 221
Score = 48.1 bits (113), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|281206149|gb|EFA80338.1| RNA recognition motif-containing protein RRM [Polysphondylium
pallidum PN500]
Length = 640
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ L +++ L+E+FS FGE+++ ++++D+ N + +G+VRF ADA KA M
Sbjct: 159 LFLKPLPATLSDDQLKELFSPFGEILECKVMIDQNGNS-KLAGFVRFCNEADATKAMQAM 217
Query: 171 DG 172
+G
Sbjct: 218 NG 219
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
E D +++ L + L +FS FG+V+ ++++D N G G+VRF + ++++
Sbjct: 65 EKDQTNVFVKYLPNEYGDYELFTLFSPFGKVMSAKVMVDAKGNS-YGYGFVRFSSPSESK 123
Query: 165 KAQLYMDGFHRLQSLLQLLQREIVREL 191
KA MDGF QL+ ++++ L
Sbjct: 124 KAIDNMDGF-------QLMHKKLLCRL 143
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 40/72 (55%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ L V++ +L ++FS FG + V ++ D+ +G G+V+F+ + DA + M
Sbjct: 508 LFVFHLPGFVDDSYLYKLFSRFGPLQSVRVITDKDTGENKGYGFVKFQNKDDAITSLNEM 567
Query: 171 DGFHRLQSLLQL 182
+G Q L++
Sbjct: 568 NGLQVGQKYLKV 579
>gi|426346592|ref|XP_004040960.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 241
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|83775263|dbj|BAE65385.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 343
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 19/82 (23%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-------------------VNL 148
S + ++ L++NV E HLREIF +FG + ++L M++A V
Sbjct: 109 SSKIVVEKLTKNVTESHLREIFGSFGGIESLDLPMNKACMYGQISLSLYQPPNALFQVMT 168
Query: 149 PRGSGYVRFKTRADAEKAQLYM 170
RG+ Y+ F ADAE A +M
Sbjct: 169 NRGTAYILFNDPADAEAAIAHM 190
>gi|148702654|gb|EDL34601.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_a [Mus
musculus]
Length = 241
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|240278920|gb|EER42426.1| ribonucleoprotein [Ajellomyces capsulatus H143]
gi|325090181|gb|EGC43491.1| ribonucleoprotein [Ajellomyces capsulatus H88]
Length = 472
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 99 PRKASTE-NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
P+K + N+ L+I +LS NV+E LR F FGE+ V +V DR RG GYV F
Sbjct: 220 PKKTKVDSNEGGNLFIGNLSWNVDEEWLRSEFEEFGELAGVRIVTDRDSGRSRGFGYVEF 279
Query: 158 K 158
Sbjct: 280 T 280
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 85 GRSPAPPSKRASSPPRK--ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
GRS A P +RA S + T +S L+I +++ + NE + E F+ G ++ V L
Sbjct: 309 GRSNAAPKERAQSRAQNFGDQTSPESDTLFIGNIAFSANENMISEAFAEHGSILGVRLPT 368
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D P+G GYV+F + +A A ++G
Sbjct: 369 DPESGRPKGFGYVQFSSVDEARSAFQALNG 398
>gi|355568958|gb|EHH25239.1| hypothetical protein EGK_09022 [Macaca mulatta]
Length = 222
Score = 47.8 bits (112), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 34/63 (53%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
L+I SLS +V E + E F G+V V L DR P+G GYV+F + DA A
Sbjct: 297 TLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPKGFGYVQFSSVDDATAALKA 356
Query: 170 MDG 172
M+G
Sbjct: 357 MNG 359
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
E + +++ LS NV+ L+ F + GEVV +V DR RG GYV F
Sbjct: 192 EEATTNVFVGQLSWNVDNDWLKSEFESCGEVVSARVVFDRDSQKSRGFGYVEF 244
>gi|45361503|ref|NP_989328.1| serine/arginine-rich splicing factor 2 [Xenopus (Silurana)
tropicalis]
gi|39794351|gb|AAH64167.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
gi|89272888|emb|CAJ82901.1| splicing factor, arginine/serine-rich 2 [Xenopus (Silurana)
tropicalis]
Length = 220
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|403160814|ref|XP_003321256.2| hypothetical protein PGTG_02298 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375170408|gb|EFP76837.2| hypothetical protein PGTG_02298 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 348
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 104 TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
T + S V+ + L++NV H+REIF +G + +V+L + R + RG+ V + T A
Sbjct: 132 TGSGSKVIEVSKLTKNVTAEHVREIFKVYGTIREVDLPIVRRIGSHRGTAIVTYDTDKAA 191
Query: 164 EKAQLYMD 171
+KA +M+
Sbjct: 192 QKAVSHMN 199
>gi|428183948|gb|EKX52804.1| hypothetical protein GUITHDRAFT_55523, partial [Guillardia theta
CCMP2712]
Length = 72
Score = 47.8 bits (112), Expect = 0.010, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 113 IDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+++L+RNV E HL+EIF +FG++ L NLP G+G+V ++ R +AE+A MDG
Sbjct: 1 VENLTRNVGEAHLKEIFESFGKIKTSSLDFSERSNLPTGTGFVEYEKREEAEEAIAAMDG 60
>gi|221219380|gb|ACM08351.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223647188|gb|ACN10352.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673061|gb|ACN12712.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 47.8 bits (112), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Query: 88 PAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN 147
PA P +RA + ST S VL++ ++S ++ E L E+F+ +GEV V L DR
Sbjct: 401 PADPERRAKAFGD--STSAPSSVLFVGNVSFDMTEDGLWEVFAEYGEVKSVRLPTDRDTQ 458
Query: 148 LPRGSGYVRFKTRADAEKAQLYMDG 172
+G GYV F D E A+ +G
Sbjct: 459 RLKGYGYVEF---VDVESAKKAFEG 480
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 46/102 (45%), Gaps = 19/102 (18%)
Query: 89 APPSKR-----ASSPPRKASTEN-------------DSLVLYIDSLSRNVNEGHLREIFS 130
A KR S+P +K N DS +++ LS NV+ L + F+
Sbjct: 283 AKNGKRKADESTSAPSKKTKLANGDAAAQTSSDSQEDSKTVFVGRLSWNVDNDWLAQEFA 342
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ GEVV + MDR RG G+V F T A+ A + ++G
Sbjct: 343 DCGEVVSARVQMDRNTGKSRGFGFVEFAT-AEGANAAVALNG 383
>gi|384498363|gb|EIE88854.1| hypothetical protein RO3G_13565 [Rhizopus delemar RA 99-880]
Length = 255
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S +L + LS EG L ++F FG + V +V D N RG G+V FK + DA +A+
Sbjct: 130 SNILGVFGLSLRTREGDLEDVFRQFGSIEKVTIVYDHRSNKSRGFGFVYFKDQTDATRAR 189
Query: 168 LYMDG 172
M+G
Sbjct: 190 DAMNG 194
>gi|403280479|ref|XP_003931745.1| PREDICTED: uncharacterized protein LOC101052045 [Saimiri
boliviensis boliviensis]
Length = 209
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|223647184|gb|ACN10350.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
gi|223673057|gb|ACN12710.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 212
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|327264866|ref|XP_003217232.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Anolis
carolinensis]
Length = 221
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|294461367|gb|ADE76245.1| unknown [Picea sitchensis]
gi|294463638|gb|ADE77346.1| unknown [Picea sitchensis]
Length = 220
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 5/77 (6%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
EN LY+ LS V E L E FS G+V+D LV++ + RG G+V + DAE
Sbjct: 38 ENPGNTLYVTGLSTRVTEKDLEEHFSGEGKVIDCRLVVEPRTRISRGFGFVTMGSLEDAE 97
Query: 165 KAQLYMDGFHRLQSLLQ 181
+ Y++ QS+L+
Sbjct: 98 RCIKYLN-----QSILE 109
>gi|242822492|ref|XP_002487897.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
gi|218712818|gb|EED12243.1| nucleolin protein Nsr1, putative [Talaromyces stipitatus ATCC
10500]
Length = 479
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 9/85 (10%)
Query: 89 APPSKRASSPP----RKASTE--NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
AP ++A P +K+ TE ++S L++ +LS NV+E LR F FGE+ V ++
Sbjct: 205 APKKRKAEEEPATNAKKSKTESADNSPNLFVGNLSWNVDEEWLRREFEEFGELSGVRIMT 264
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQ 167
+R RG GYV + ADA A+
Sbjct: 265 ERESGRSRGFGYVEY---ADASSAK 286
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S L++ +L V+E +RE+F G++ + L D P+G GYV F + +A +A
Sbjct: 335 ESNTLFVGNLVFGVDENAVREVFEGQGQIQGIRLPTDAETGRPKGYGYVEFSSVDEARQA 394
>gi|209736008|gb|ACI68873.1| Splicing factor, arginine/serine-rich 2 [Salmo salar]
Length = 222
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFSFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|116175283|ref|NP_001070697.1| serine/arginine-rich splicing factor 2 [Sus scrofa]
gi|122131841|sp|Q06A98.1|SRSF2_PIG RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|115371755|gb|ABI96202.1| SFRS2 [Sus scrofa]
Length = 221
Score = 47.4 bits (111), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|359320233|ref|XP_003639286.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 1
[Canis lupus familiaris]
gi|359320235|ref|XP_003639287.1| PREDICTED: serine/arginine-rich splicing factor 2-like isoform 2
[Canis lupus familiaris]
Length = 221
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|193784791|dbj|BAG53944.1| unnamed protein product [Homo sapiens]
Length = 195
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|90076648|dbj|BAE88004.1| unnamed protein product [Macaca fascicularis]
Length = 210
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|426346598|ref|XP_004040963.1| PREDICTED: serine/arginine-rich splicing factor 2 [Gorilla gorilla
gorilla]
Length = 206
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|346979496|gb|EGY22948.1| gar2 [Verticillium dahliae VdLs.17]
Length = 485
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Query: 98 PPRKASTEN---DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGY 154
PP+KA TE+ S L++ SL+ VN+ L + FS F + ++ DR RG GY
Sbjct: 212 PPKKARTEDMSEQSATLFVGSLAWAVNDDILYQAFSEFPNLTSARVITDREGGRSRGFGY 271
Query: 155 VRFKTRADAEKAQLYMD 171
V F +DAE A+ ++
Sbjct: 272 VDF---SDAESAKAALE 285
>gi|332260181|ref|XP_003279164.1| PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing
factor 2 [Nomascus leucogenys]
Length = 221
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|6755478|ref|NP_035488.1| serine/arginine-rich splicing factor 2 [Mus musculus]
gi|47271443|ref|NP_003007.2| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|57528425|ref|NP_001009720.1| serine/arginine-rich splicing factor 2 [Rattus norvegicus]
gi|77735589|ref|NP_001029490.1| serine/arginine-rich splicing factor 2 [Bos taurus]
gi|299758481|ref|NP_001177668.1| splicing factor, arginine/serine-rich 2 [Macaca mulatta]
gi|306482646|ref|NP_001182356.1| serine/arginine-rich splicing factor 2 [Homo sapiens]
gi|126308709|ref|XP_001371367.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Monodelphis
domestica]
gi|296203283|ref|XP_002748811.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1
[Callithrix jacchus]
gi|395825870|ref|XP_003786143.1| PREDICTED: serine/arginine-rich splicing factor 2 [Otolemur
garnettii]
gi|397494981|ref|XP_003818344.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Pan
paniscus]
gi|397494983|ref|XP_003818345.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Pan
paniscus]
gi|402901195|ref|XP_003913541.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 1 [Papio
anubis]
gi|402901197|ref|XP_003913542.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 2 [Papio
anubis]
gi|402901199|ref|XP_003913543.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Papio
anubis]
gi|402901201|ref|XP_003913544.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 4 [Papio
anubis]
gi|18280933|sp|Q62093.4|SRSF2_MOUSE RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Putative myelin
regulatory factor 1; Short=MRF-1; AltName: Full=Splicing
component, 35 kDa; AltName: Full=Splicing factor SC35;
Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|52783335|sp|Q6PDU1.3|SRSF2_RAT RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|60416437|sp|Q01130.4|SRSF2_HUMAN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Protein PR264; AltName: Full=Splicing component, 35
kDa; AltName: Full=Splicing factor SC35; Short=SC-35;
AltName: Full=Splicing factor, arginine/serine-rich 2
gi|110287957|sp|Q3MHR5.3|SRSF2_BOVIN RecName: Full=Serine/arginine-rich splicing factor 2; AltName:
Full=Splicing component, 35 kDa; AltName: Full=Splicing
factor SC35; Short=SC-35; AltName: Full=Splicing factor,
arginine/serine-rich 2
gi|539663|pir||A42701 splicing factor SFRS2 - human
gi|35597|emb|CAA44307.1| PR 264 [Homo sapiens]
gi|455419|emb|CAA53383.1| PR264/SC35 [Homo sapiens]
gi|3335676|gb|AAC71000.1| splicing factor SC35 [Mus musculus]
gi|12653143|gb|AAH00339.1| SFRS2 protein [Homo sapiens]
gi|12654915|gb|AAH01303.1| SFRS2 protein [Homo sapiens]
gi|13529557|gb|AAH05493.1| Sfrs2 protein [Mus musculus]
gi|26351947|dbj|BAC39610.1| unnamed protein product [Mus musculus]
gi|26352962|dbj|BAC40111.1| unnamed protein product [Mus musculus]
gi|30583339|gb|AAP35914.1| splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|34849641|gb|AAH58508.1| Splicing factor, arginine/serine-rich 2 [Rattus norvegicus]
gi|47123339|gb|AAH70086.1| Splicing factor, arginine/serine-rich 2 [Homo sapiens]
gi|61359244|gb|AAX41688.1| splicing factor arginine/serine-rich 2 [synthetic construct]
gi|67969334|dbj|BAE01019.1| unnamed protein product [Macaca fascicularis]
gi|74227066|dbj|BAE38330.1| unnamed protein product [Mus musculus]
gi|75775273|gb|AAI05139.1| Splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|90076288|dbj|BAE87824.1| unnamed protein product [Macaca fascicularis]
gi|119609845|gb|EAW89439.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609846|gb|EAW89440.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609851|gb|EAW89445.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|119609853|gb|EAW89447.1| splicing factor, arginine/serine-rich 2, isoform CRA_a [Homo
sapiens]
gi|123980614|gb|ABM82136.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|123995435|gb|ABM85319.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|148702655|gb|EDL34602.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|148702656|gb|EDL34603.1| splicing factor, arginine/serine-rich 2 (SC-35), isoform CRA_b [Mus
musculus]
gi|149054884|gb|EDM06701.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054885|gb|EDM06702.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|149054887|gb|EDM06704.1| similar to splicing factor, arginine/serine-rich 2, isoform CRA_a
[Rattus norvegicus]
gi|168277776|dbj|BAG10866.1| splicing factor, arginine/serine-rich 2 [synthetic construct]
gi|193784944|dbj|BAG54097.1| unnamed protein product [Homo sapiens]
gi|296476083|tpg|DAA18198.1| TPA: splicing factor, arginine/serine-rich 2 [Bos taurus]
gi|380782971|gb|AFE63361.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|380815556|gb|AFE79652.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384941848|gb|AFI34529.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|384948766|gb|AFI37988.1| serine/arginine-rich splicing factor 2 [Macaca mulatta]
gi|410226692|gb|JAA10565.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410226694|gb|JAA10566.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410262826|gb|JAA19379.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410262828|gb|JAA19380.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299756|gb|JAA28478.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410299760|gb|JAA28480.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410299766|gb|JAA28483.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338225|gb|JAA38059.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338227|gb|JAA38060.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338229|gb|JAA38061.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|410338231|gb|JAA38062.1| serine/arginine-rich splicing factor 2 [Pan troglodytes]
gi|410338233|gb|JAA38063.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
gi|228504|prf||1805195B RNA-binding protein PR264
Length = 221
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|119492702|ref|XP_001263670.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
gi|119411830|gb|EAW21773.1| ribonucleoprotein, chloroplast [Neosartorya fischeri NRRL 181]
Length = 533
Score = 47.4 bits (111), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 95 ASSPPRKASTEND----SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
A++P + T+ + S L++ +LS NV+E LR+ F FGE+ V +V DR R
Sbjct: 268 AAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFETFGELSGVRIVTDRDSGRSR 327
Query: 151 GSGYVRF 157
G GYV +
Sbjct: 328 GFGYVEY 334
Score = 38.1 bits (87), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 101 KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTR 160
+AS E+D+L ++ ++ + NE + E+F G +V + L D P+G GYV+F +
Sbjct: 389 QASPESDTL--FVGNIPFSANEDSVSELFGQSGTIVGIRLPTDPESGRPKGFGYVQFSSV 446
Query: 161 ADAEKAQLYMDG 172
+A +A ++G
Sbjct: 447 DEARQAFNDLNG 458
>gi|47087067|ref|NP_998547.1| splicing factor, arginine/serine-rich 2 [Danio rerio]
gi|28279759|gb|AAH46045.1| Splicing factor, arginine/serine-rich 2 [Danio rerio]
Length = 225
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|41946787|gb|AAH65971.1| Zgc:55876 protein [Danio rerio]
Length = 220
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|425781065|gb|EKV19047.1| Nucleolin protein Nsr1, putative [Penicillium digitatum PHI26]
Length = 537
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
L+I +LS NV+E L+ FS FGE+ V +V DR RG GYV + +
Sbjct: 283 LFIGNLSWNVDEEWLQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNS 331
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 104 TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
T +S L++ +L + E L E+F G V+ + L ++ P+G GYV+F + +A
Sbjct: 381 TSPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEA 440
Query: 164 EKAQLYMDGFHRLQ 177
+ A ++G H L+
Sbjct: 441 KAAHAALNG-HELE 453
>gi|50409715|ref|XP_456900.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
gi|49652564|emb|CAG84877.1| DEHA2A13134p [Debaryomyces hansenii CBS767]
Length = 447
Score = 47.0 bits (110), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 100 RKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
+K T + L++ LS ++++ LR F G V+ ++M+R+ RG GYV F +
Sbjct: 189 KKPKTNEEPATLFVGRLSWSIDDEWLRREFEPVGGVISARVIMERSTGKSRGYGYVDFDS 248
Query: 160 RADAEKA 166
++ AEKA
Sbjct: 249 KSAAEKA 255
>gi|164657762|ref|XP_001730007.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
gi|159103901|gb|EDP42793.1| hypothetical protein MGL_2993 [Malassezia globosa CBS 7966]
Length = 638
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 88 PAPPSKRASSPPRKASTENDSL-VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAV 146
PA +K++ + + T ++ + L++ LS NV+ L+ F +G V+D + DR
Sbjct: 372 PASSTKKSKTDSNENPTHDNGIKTLWVGQLSWNVDNDWLKSEFEQYGTVLDARVQCDRDS 431
Query: 147 NLPRGSGYVRFKTRADA 163
RG GYV F T A+A
Sbjct: 432 GRSRGFGYVDFATSAEA 448
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I L+ + E + F+ FGEV V L + P+G GYV F ++ +A KA
Sbjct: 494 SNTLFIGGLAWALTEDDIWNAFAEFGEVTGVRLPKEIDSGRPKGFGYVEFVSQDNAAKAL 553
Query: 168 LYMDG 172
M+G
Sbjct: 554 ETMNG 558
>gi|71000291|ref|XP_754840.1| nucleolin protein Nsr1 [Aspergillus fumigatus Af293]
gi|66852477|gb|EAL92802.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus Af293]
Length = 546
Score = 47.0 bits (110), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 95 ASSPPRKASTEND----SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
A++P + T+ + S L++ +LS NV+E LR+ F +FGE+ V +V DR R
Sbjct: 284 AAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSR 343
Query: 151 GSGYVRF 157
G GYV +
Sbjct: 344 GFGYVEY 350
>gi|119609849|gb|EAW89443.1| splicing factor, arginine/serine-rich 2, isoform CRA_d [Homo
sapiens]
gi|193783682|dbj|BAG53593.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 4 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 63
Query: 171 DG 172
DG
Sbjct: 64 DG 65
>gi|159127852|gb|EDP52967.1| nucleolin protein Nsr1, putative [Aspergillus fumigatus A1163]
Length = 546
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 95 ASSPPRKASTEND----SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
A++P + T+ + S L++ +LS NV+E LR+ F +FGE+ V +V DR R
Sbjct: 284 AAAPKKSKKTDEEASGASANLFVGNLSWNVDEEWLRQEFESFGELSGVRIVTDRDSGRSR 343
Query: 151 GSGYVRF 157
G GYV +
Sbjct: 344 GFGYVEY 350
>gi|406867984|gb|EKD21021.1| hypothetical protein MBM_00134 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 544
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 6/91 (6%)
Query: 86 RSPAPPSKRASSPPRKA----STENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
RS APP RA R A ST S L++ +LS + +E + E F G VV+V L
Sbjct: 375 RSDAPPKDRAQG--RAAAFGDSTNPPSDTLFLGNLSFDADENTVGEAFGEHGTVVNVRLP 432
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D+ P+G GYV F + DA+ A M G
Sbjct: 433 TDQETGNPKGFGYVTFSSIDDAKTAFEAMTG 463
Score = 42.0 bits (97), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 89 APPSKR------ASSPPRKASTEN----DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDV 138
A PSK+ ++P +K TE S L++ +LS NV++ L F FGE+
Sbjct: 266 AAPSKKRKADDEVAAPAKKTKTETAEDTGSKNLFVGNLSWNVDDEWLMREFEEFGEISGA 325
Query: 139 ELVMDRAVNLPRGSGYVRF 157
++ DR +G GYV F
Sbjct: 326 RVISDRESGRSKGFGYVEF 344
>gi|41054475|ref|NP_955945.1| serine/arginine-rich splicing factor 2b [Danio rerio]
gi|28278933|gb|AAH45480.1| Zgc:55876 [Danio rerio]
Length = 218
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|330795211|ref|XP_003285668.1| hypothetical protein DICPUDRAFT_97109 [Dictyostelium purpureum]
gi|325084394|gb|EGC37823.1| hypothetical protein DICPUDRAFT_97109 [Dictyostelium purpureum]
Length = 227
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 34/57 (59%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+++ +S NE L+ FS++G V++ +++MD N +G G++ F+ + EK +
Sbjct: 113 IFVGGISWRANETQLKNYFSSYGTVLECKIIMDYNTNKSKGYGFITFENESSIEKVK 169
>gi|148230060|ref|NP_001080743.1| serine/arginine-rich splicing factor 2 [Xenopus laevis]
gi|28175397|gb|AAH45229.1| Sfrs2-prov protein [Xenopus laevis]
Length = 215
Score = 47.0 bits (110), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
SPP E D +++ L+ + L+E F G V + ++V DR N +G GYV
Sbjct: 163 SPPALTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVE 222
Query: 157 FKT 159
FKT
Sbjct: 223 FKT 225
Score = 38.5 bits (88), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D + RG G+V+F+ A +A M
Sbjct: 275 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDS-GRSRGYGFVQFRDATQAREALEKM 333
Query: 171 DGF 173
+GF
Sbjct: 334 NGF 336
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 47.0 bits (110), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
E+D +++ LS+N+ E L ++FS G V++V L+ D+ +G GYV F + +
Sbjct: 262 ESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQKEMVD 321
Query: 165 KA 166
KA
Sbjct: 322 KA 323
>gi|409079870|gb|EKM80231.1| hypothetical protein AGABI1DRAFT_73218 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 568
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
++L +++ LS +V+ L + FS GEV + +DR RG GYV F T ADA +
Sbjct: 306 ETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFST-ADAVEK 364
Query: 167 QLYMDGFH 174
L M+G+
Sbjct: 365 ALKMNGYE 372
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
SPP E D +++ L+ + L+E F G V + ++V DR N +G GYV
Sbjct: 163 SPPALTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVE 222
Query: 157 FKT 159
FKT
Sbjct: 223 FKT 225
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D + RG G+V+F+ A +A M
Sbjct: 275 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDS-GRSRGYGFVQFRDATQAREALEKM 333
Query: 171 DGF 173
+GF
Sbjct: 334 NGF 336
>gi|331228813|ref|XP_003327073.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309306063|gb|EFP82654.1| hypothetical protein PGTG_08850 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 637
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 99 PRKASTENDSLV-LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
P+KA + + +Y+ LS NV+ L+ F + G +VD ++ DR +G GY+ F
Sbjct: 347 PKKAKAAEEGIKNVYVGGLSWNVDSEWLKSEFESCGPIVDARVITDRDTQKSKGFGYIDF 406
Query: 158 KTRADAEKAQLYMDGFH 174
+T A+KA +G
Sbjct: 407 ETCEGAQKAIETKNGTE 423
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%), Gaps = 7/72 (9%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT----RAD 162
+S L++ +L + + + EIF+ +G+V V L D +G GYV F T RA
Sbjct: 457 ESTTLFVGNLPFSATQDSVWEIFAEYGDVNSVRLPTDPETQRVKGFGYVEFATLESARAA 516
Query: 163 AEKAQ---LYMD 171
EK + +Y+D
Sbjct: 517 VEKGRGEGVYID 528
>gi|90076840|dbj|BAE88100.1| unnamed protein product [Macaca fascicularis]
Length = 306
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 24/108 (22%)
Query: 68 RSPPPQRNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
+S PP+R++ R+ RSP+P P+K ++I L+RNV + H+
Sbjct: 140 KSKPPKRDEK----ERKRRSPSPKPTK-----------------VHIGRLARNVTKDHIM 178
Query: 127 EIFSNFGEVVDVELVMDRAV--NLPRGSGYVRFKTRADAEKAQLYMDG 172
EIFS +G++ +++ + P+ V F+ +AEKA +MDG
Sbjct: 179 EIFSTYGKIKMIDIARRKGCIPICPKAMHTVEFENPDEAEKALKHMDG 226
>gi|426198367|gb|EKV48293.1| hypothetical protein AGABI2DRAFT_142473 [Agaricus bisporus var.
bisporus H97]
Length = 559
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
++L +++ LS +V+ L + FS GEV + +DR RG GYV F T ADA +
Sbjct: 306 ETLSIFVGQLSWSVDNDRLAQEFSECGEVSSATVQLDRNTGRSRGFGYVHFST-ADAVEK 364
Query: 167 QLYMDGFH 174
L M+G+
Sbjct: 365 ALKMNGYE 372
>gi|397494985|ref|XP_003818346.1| PREDICTED: serine/arginine-rich splicing factor 2 isoform 3 [Pan
paniscus]
gi|119609854|gb|EAW89448.1| splicing factor, arginine/serine-rich 2, isoform CRA_g [Homo
sapiens]
gi|194387574|dbj|BAG60151.1| unnamed protein product [Homo sapiens]
Length = 209
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 32/63 (50%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
SPP E D +++ L+ + L+E F G V + ++V DR N +G GYV
Sbjct: 163 SPPALTEDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVE 222
Query: 157 FKT 159
FKT
Sbjct: 223 FKT 225
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D + RG G+V+F+ A +A M
Sbjct: 275 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDS-GRSRGYGFVQFRDATQAREALEKM 333
Query: 171 DGF 173
+GF
Sbjct: 334 NGF 336
>gi|170088132|ref|XP_001875289.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650489|gb|EDR14730.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 299
Score = 46.6 bits (109), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ V+ I +L+RNV E HL+ +F +GE++ +L + RG + F A KA
Sbjct: 31 DAKVIIITNLTRNVVESHLKTVFGFYGEIIKTDLPLFGKSGQNRGKAALEFADPPSAHKA 90
Query: 167 QLYMDGFHRLQSLLQL 182
+M+G ++LQ+
Sbjct: 91 ASHMNGGQLDGAILQV 106
>gi|452848411|gb|EME50343.1| hypothetical protein DOTSEDRAFT_69017 [Dothistroma septosporum
NZE10]
Length = 516
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 100 RKASTENDSLV--LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+K TE+ + L++ +LS NV+E L F FG + V ++ DR +G GYV F
Sbjct: 242 KKTKTEDPAATGNLFVGNLSWNVDEEWLTREFEEFGAIKAVRVITDRDSGRSKGYGYVEF 301
Query: 158 KTRADAEKA 166
++ DA KA
Sbjct: 302 ESADDAAKA 310
Score = 42.4 bits (98), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ ++S + + + E+F +G + V L DR P+G GYV F + +A+ A
Sbjct: 360 SATLFVGNISFDATQDMVTEVFQEYGSINAVRLPTDRETGAPKGFGYVEFSSIEEAKSAM 419
Query: 168 LYMDG 172
+ G
Sbjct: 420 ENLTG 424
>gi|321472746|gb|EFX83715.1| hypothetical protein DAPPUDRAFT_315633 [Daphnia pulex]
Length = 323
Score = 46.6 bits (109), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 21/94 (22%)
Query: 100 RKASTENDS-------------------LVLYIDSLSRNVNEGHLREIFSNFGEVVDVEL 140
+ + EN L ++I L+RNVN+ H+ EIFS +G + VE
Sbjct: 132 KDRNKENKRSRSTSPRRRRRDRSPTPKPLRIHIGRLTRNVNKEHINEIFSVYGTIKAVEF 191
Query: 141 VMDRA--VNLPRGSGYVRFKTRADAEKAQLYMDG 172
+RA +L RG Y+ F T +AE A +MDG
Sbjct: 192 PNERAGLSHLHRGFAYIEFSTADEAENAMKHMDG 225
>gi|301765996|ref|XP_002918431.1| PREDICTED: hypothetical protein LOC100477809 [Ailuropoda
melanoleuca]
Length = 182
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|281342789|gb|EFB18373.1| hypothetical protein PANDA_006871 [Ailuropoda melanoleuca]
Length = 173
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|21751099|dbj|BAC03903.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 46.6 bits (109), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|410080926|ref|XP_003958043.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
gi|372464630|emb|CCF58908.1| hypothetical protein KAFR_0F03120 [Kazachstania africana CBS 2517]
Length = 412
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + ++ E+FS FGE+V V + P+G GYV++ DA+KA
Sbjct: 264 SETLFLGNLSFNADRDNISEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYTNVEDAKKA 322
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L+ F + G V+ ++ +R + RG GYV F+ + AEKA
Sbjct: 166 TIFVGRLSWSIDDEWLKNEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKEYAEKAVKE 225
Query: 170 MDG 172
M G
Sbjct: 226 MHG 228
>gi|324508128|gb|ADY43435.1| RNA-binding protein 39 [Ascaris suum]
Length = 535
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LYI L ++ E LR IF FG++ +E+ D + + +G YV F+ DA++A
Sbjct: 269 LKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDLS-GVSKGYAYVTFRHADDAKRAME 327
Query: 169 YMDGFH 174
M+GF
Sbjct: 328 QMNGFE 333
>gi|348509946|ref|XP_003442507.1| PREDICTED: serine/arginine-rich splicing factor 2-like [Oreochromis
niloticus]
Length = 218
Score = 46.6 bits (109), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPEALRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|451850002|gb|EMD63305.1| hypothetical protein COCSADRAFT_161812 [Cochliobolus sativus
ND90Pr]
Length = 489
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
L++ +LS N++E LR F +FGE+V ++ DR +G GYV F
Sbjct: 237 LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFA 284
>gi|452001822|gb|EMD94281.1| hypothetical protein COCHEDRAFT_1094167 [Cochliobolus
heterostrophus C5]
Length = 501
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
L++ +LS N++E LR F +FGE+V ++ DR +G GYV F
Sbjct: 250 LFVGNLSWNIDEDWLRREFESFGEIVGCRVITDRETGRAKGFGYVEFA 297
>gi|448520030|ref|XP_003868205.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis Co 90-125]
gi|380352544|emb|CCG22770.1| hypothetical protein CORT_0B10690 [Candida orthopsilosis]
Length = 498
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 90 PPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLP 149
P +K+A S +T+ + ++ LS N+++ L+ F + V+ ++M+RA
Sbjct: 238 PENKKAKS--ESFTTDEEPATIFAGRLSWNIDDDWLKREFEHLEGVISARVIMERATGKS 295
Query: 150 RGSGYVRFKTRADAEKAQLYMDG 172
RG GYV F +++ AE A M G
Sbjct: 296 RGYGYVDFSSKSAAENAIAEMQG 318
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS N N L E+F +G V+ L P+G GYV+F + +A+ A
Sbjct: 356 SDTLFIGNLSFNANRDKLFEVFGEYGNVISCRLPTHPDTQQPKGFGYVQFSSVDEAKAAL 415
Query: 168 LYMDG 172
++G
Sbjct: 416 EALNG 420
>gi|348544446|ref|XP_003459692.1| PREDICTED: hypothetical protein LOC100710640 [Oreochromis
niloticus]
Length = 227
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|406602740|emb|CCH45698.1| Nuclear localization sequence-binding protein [Wickerhamomyces
ciferrii]
Length = 467
Score = 46.2 bits (108), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%)
Query: 96 SSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
++P +K + + L++ LS ++++ L+ F G V+ ++ +RA RG GYV
Sbjct: 222 AAPAKKQKVDEEPATLFVGRLSWSIDDEWLKREFEPLGGVISARVIFERATGKSRGYGYV 281
Query: 156 RFKTRADAEKA 166
F +++ AEKA
Sbjct: 282 DFDSKSAAEKA 292
Score = 42.4 bits (98), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 49/103 (47%), Gaps = 16/103 (15%)
Query: 70 PPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIF 129
P N+S A++ G +P+ PS L++ +LS N N +L E+F
Sbjct: 315 PHASNNRSNDRASKFGDTPSAPSD----------------TLFLGNLSFNANRDNLSEVF 358
Query: 130 SNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
S +G +V V + P+G GYV++ + +A+ A ++G
Sbjct: 359 SEYGSIVSVRIPTHPDTEQPKGFGYVQYGSVDEAKAALEALNG 401
>gi|324507842|gb|ADY43315.1| RNA-binding protein 39 [Ascaris suum]
Length = 618
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LYI L ++ E LR IF FG++ +E+ D + + +G YV F+ DA++A
Sbjct: 352 LKLYIGQLHTSITEDMLRRIFEPFGKIDTLEIATDLS-GVSKGYAYVTFRHADDAKRAME 410
Query: 169 YMDGFH 174
M+GF
Sbjct: 411 QMNGFE 416
>gi|367006051|ref|XP_003687757.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
gi|357526062|emb|CCE65323.1| hypothetical protein TPHA_0K01910 [Tetrapisispora phaffii CBS 4417]
Length = 416
Score = 46.2 bits (108), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 16/100 (16%)
Query: 67 SRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLR 126
S S P N A + G P+ PS+ L++ +LS N + +
Sbjct: 233 STSKPAGSNNGADRAKKFGDIPSEPSE----------------TLFLGNLSFNADRDSIW 276
Query: 127 EIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
E+FS FGE+V V L P+G GYV++ DA+KA
Sbjct: 277 EMFSKFGEIVSVRLPTHPETEQPKGFGYVQYGNIDDAKKA 316
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 1/74 (1%)
Query: 100 RKASTEN-DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
+KA TE + +++ LS ++++ L+ F + G V+ ++++R + RG GYV F
Sbjct: 147 KKAKTEEGEPATIFVGRLSWSIDDEWLKNEFDHIGGVIGARVMLERGTDRSRGYGYVDFS 206
Query: 159 TRADAEKAQLYMDG 172
++ AEKA M G
Sbjct: 207 DKSYAEKAIKEMHG 220
>gi|367015628|ref|XP_003682313.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
gi|359749975|emb|CCE93102.1| hypothetical protein TDEL_0F02910 [Torulaspora delbrueckii]
Length = 436
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + ++ E+FS FGE+V V + P+G GYV++ DA+KA
Sbjct: 287 SETLFLGNLSFNADRDNIYEMFSKFGEIVSVRIPTHPETEQPKGFGYVQYGNVDDAKKA 345
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L+ F + G VV ++ +R + RG GYV F+ ++ AEKA
Sbjct: 188 TIFVGRLSWSIDDEWLKNEFDHIGGVVSARVIYERGTDRSRGYGYVDFEDKSYAEKAVKE 247
Query: 170 MDG 172
M G
Sbjct: 248 MHG 250
>gi|410925942|ref|XP_003976438.1| PREDICTED: uncharacterized protein LOC101074667 [Takifugu rubripes]
Length = 225
Score = 46.2 bits (108), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ L +D+L+ LR +F +G V DV + DR RG +VRF + DAE A
Sbjct: 14 VSLKVDNLTYRTAPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFFDKRDAEDAMD 73
Query: 169 YMDG 172
MDG
Sbjct: 74 AMDG 77
>gi|301093774|ref|XP_002997732.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262109981|gb|EEY68033.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 226
Score = 46.2 bits (108), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 10/123 (8%)
Query: 53 LSSSSSPSRSTNSRSRSPPP-----QRNKSPAVAARRGRSPAPPSKRASSPPRKASTE-- 105
+S SPS +SRSRSP P + KSP V+ R + S+ S P+ +
Sbjct: 1 MSDRGSPS-PRHSRSRSPSPRADDNEDKKSPRVSDSEDREASRHSRSRSPAPKAPAAPVD 59
Query: 106 --NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
N LY+ +L+ V + L+++FS FG V E+++D RG G+V F+ DA
Sbjct: 60 VANPGNNLYVANLATRVGQQDLQDLFSKFGRVEKCEVIVDPVTKESRGFGFVTFEDVRDA 119
Query: 164 EKA 166
E A
Sbjct: 120 EDA 122
>gi|255713222|ref|XP_002552893.1| KLTH0D03916p [Lachancea thermotolerans]
gi|238934273|emb|CAR22455.1| KLTH0D03916p [Lachancea thermotolerans CBS 6340]
Length = 505
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 100 RKASTENDS--LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+KA TE++ +++ LS +V++ L+ F G V+ ++M+R + RG GYV F
Sbjct: 245 KKAKTESNGEPATIFVGRLSWSVDDEWLKTEFEPIGGVISARVIMERGTDRSRGYGYVDF 304
Query: 158 KTRADAEKAQLYMDG 172
+ + AEKA M G
Sbjct: 305 ENKFYAEKAVKEMHG 319
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS N + ++ E F+ GEVV V L N P+G GYV++ + +A+KA
Sbjct: 356 SDTLFLGNLSFNADRDNIFETFAEHGEVVSVRLPTHPETNQPKGFGYVQYSSVDEAQKAF 415
Query: 168 LYMDGFH 174
+ G +
Sbjct: 416 EALQGHY 422
>gi|255087494|ref|XP_002505670.1| predicted protein [Micromonas sp. RCC299]
gi|226520940|gb|ACO66928.1| predicted protein [Micromonas sp. RCC299]
Length = 414
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 61/121 (50%), Gaps = 20/121 (16%)
Query: 86 RSPAPPSKRASSPPRK-ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR 144
R+P R+ SP R+ T++++ V+ + +L+R VN HL EIF+++G V V L R
Sbjct: 27 RAPEKSEARSGSPMREDGETDDETRVVRVANLTRIVNHKHLEEIFAHYGRVERVALERFR 86
Query: 145 ----------AVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMS 194
+ NL +G+V ++ DA +A +MDG Q+ +E+ I S
Sbjct: 87 PDKADENGGDSSNLR--AGFVEYERTGDAARAMSHMDG-------GQIDGKEVAVTRIRS 137
Query: 195 V 195
V
Sbjct: 138 V 138
>gi|317419577|emb|CBN81614.1| Splicing factor, arginine/serine-rich 2 [Dicentrarchus labrax]
Length = 228
Score = 45.8 bits (107), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|357123127|ref|XP_003563264.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01-like
[Brachypodium distachyon]
Length = 272
Score = 45.8 bits (107), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 57/124 (45%), Gaps = 19/124 (15%)
Query: 63 TNSRSRSPPPQRNKSPAVAARRGRSPAP-----PSKRASSPPRKASTENDSLVLYIDSLS 117
T SRSRSP A + RSP P R+ SP R+ N LY+ LS
Sbjct: 24 TKSRSRSP---------AAQSQSRSPPPDPRSQARSRSRSPEREPDAGNHGNTLYVTGLS 74
Query: 118 RNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQ 177
V + L++ F+ G+VV +V++ + RG ++ T DAE+ Y++ Q
Sbjct: 75 SKVTDRELKDYFNKEGKVVSCHVVLEPHTRVSRGFAFITMDTVEDAERCIKYLN-----Q 129
Query: 178 SLLQ 181
S LQ
Sbjct: 130 SELQ 133
>gi|348687891|gb|EGZ27705.1| hypothetical protein PHYSODRAFT_472294 [Phytophthora sojae]
Length = 154
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ +L+ V E L+E+FS FG V E+++D RG G+V F+ DAE A M
Sbjct: 81 LYVANLATRVGERDLQELFSKFGRVDKCEVIVDPVTRESRGFGFVTFEDVRDAEDAVKEM 140
Query: 171 D 171
+
Sbjct: 141 N 141
>gi|444727801|gb|ELW68279.1| Serine/arginine-rich splicing factor 2 [Tupaia chinensis]
Length = 218
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 45.8 bits (107), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
P R +P E D +++ L+ + L+E F G V + ++V DR N +
Sbjct: 165 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 224
Query: 151 GSGYVRFKTRADAEKAQLYMDGFHRLQ--SLLQLLQREIVREL 191
G GYV FK D+ +A L + G L ++QL + E R++
Sbjct: 225 GVGYVEFKNE-DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQV 266
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 284 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDN-GRSRGYGFVQFRDAGQAREALEKM 342
Query: 171 DGF 173
+GF
Sbjct: 343 NGF 345
>gi|410929633|ref|XP_003978204.1| PREDICTED: uncharacterized protein LOC101070858 [Takifugu rubripes]
Length = 229
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFVRFLDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|189203851|ref|XP_001938261.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985360|gb|EDU50848.1| nuclear localization sequence-binding protein [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 475
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ ++S N++E LR F FGE+V ++ DR +G GYV F ADA KAQ M
Sbjct: 223 LFVGNMSWNIDEDWLRREFEGFGEIVGCRVITDRETGRAKGFGYVEFANAADAAKAQKEM 282
>gi|425783198|gb|EKV21057.1| Nucleolin protein Nsr1, putative [Penicillium digitatum Pd1]
Length = 467
Score = 45.8 bits (107), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
L+I +LS NV+E ++ FS FGE+ V +V DR RG GYV + +
Sbjct: 213 LFIGNLSWNVDEEWVQREFSEFGELSGVRIVTDRETGRSRGFGYVEYNS 261
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 104 TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
T +S L++ +L + E L E+F G V+ + L ++ P+G GYV+F + +A
Sbjct: 311 TSPESDTLFVGNLPFSATEDALHEVFGAQGSVLGIRLPTEQETGRPKGFGYVQFSSIDEA 370
Query: 164 EKAQLYMDGFHRLQ 177
+ A ++G H L+
Sbjct: 371 KAAHAALNG-HELE 383
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
P R +P E D +++ L+ + L+E F G V + ++V DR N +
Sbjct: 164 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 223
Query: 151 GSGYVRFKTRADAEKAQLYMDGFHRLQ--SLLQLLQREIVREL 191
G GYV FK D+ +A L + G L ++QL + E R++
Sbjct: 224 GVGYVEFKNE-DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQV 265
Score = 37.7 bits (86), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 283 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDN-GRSRGYGFVQFRDAGQAREALEKM 341
Query: 171 DGF 173
+GF
Sbjct: 342 NGF 344
>gi|426232774|ref|XP_004010395.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Ovis aries]
Length = 463
Score = 45.8 bits (107), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 280 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSETGCSKGYGFITFSDSECARRALEQL 339
Query: 171 DGFH 174
+GF
Sbjct: 340 NGFE 343
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
P R +P E D +++ L+ + L+E F G V + ++V DR N +
Sbjct: 165 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 224
Query: 151 GSGYVRFKTRADAEKAQLYMDGFHRLQ--SLLQLLQREIVREL 191
G GYV FK D+ +A L + G L ++QL + E R++
Sbjct: 225 GVGYVEFKNE-DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQV 266
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 284 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDN-GRSRGYGFVQFRDAGQAREALEKM 342
Query: 171 DGF 173
+GF
Sbjct: 343 NGF 345
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 45.8 bits (107), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
P R +P E D +++ L+ + L+E F G V + ++V DR N +
Sbjct: 165 PRARDGTPQPLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSK 224
Query: 151 GSGYVRFKTRADAEKAQLYMDGFHRLQ--SLLQLLQREIVREL 191
G GYV FK D+ +A L + G L ++QL + E R++
Sbjct: 225 GVGYVEFKNE-DSVQAALQLTGQKLLGIPVIVQLTEAEKNRQV 266
Score = 37.7 bits (86), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 284 LYVGNIHFSITEQDLQNVFEPFGELEFVQLQKDDN-GRSRGYGFVQFRDAGQAREALEKM 342
Query: 171 DGF 173
+GF
Sbjct: 343 NGF 345
>gi|365986018|ref|XP_003669841.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
gi|343768610|emb|CCD24598.1| hypothetical protein NDAI_0D02840 [Naumovozyma dairenensis CBS 421]
Length = 426
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N ++ ++ E FS +GE++ V + P+G GYV+F DA+KA
Sbjct: 269 SDTLFLGNLSFNADKDNIYETFSKYGEIISVRIPTHPETEQPKGFGYVQFSNIEDAKKA 327
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G VV ++ +R + RG GYV F+ ++ AEKA
Sbjct: 172 TIFVGRLSWSIDDEWLKKEFEHIGGVVGARVIYERGTDRSRGYGYVDFEDKSYAEKAIQE 231
Query: 170 MDG 172
M G
Sbjct: 232 MQG 234
>gi|169623995|ref|XP_001805404.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
gi|111056352|gb|EAT77472.1| hypothetical protein SNOG_15247 [Phaeosphaeria nodorum SN15]
Length = 451
Score = 45.8 bits (107), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 83 RRGRSPAPPS--KRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVEL 140
R+ + A P+ K + P +N L++ SLS N++E LR F FGE+ +
Sbjct: 174 RKAEAAAEPAVKKTKTEAPASEGIKN----LFVGSLSWNIDEDWLRREFEGFGEITGCRV 229
Query: 141 VMDRAVNLPRGSGYVRFK 158
+ DR +G GYV F
Sbjct: 230 ITDRESGRSKGFGYVEFA 247
>gi|358054336|dbj|GAA99262.1| hypothetical protein E5Q_05956 [Mixia osmundae IAM 14324]
Length = 252
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+ + L+ NV E HLREIF +G+++ ++ + R PRG + + ++A+KA Y
Sbjct: 51 TVTLSKLTPNVTEAHLREIFGVYGKILSIDFAIPRG-GRPRGEADIVYDHMSEADKAIAY 109
Query: 170 MD 171
MD
Sbjct: 110 MD 111
>gi|346972403|gb|EGY15855.1| RNA-binding protein rsd1 [Verticillium dahliae VdLs.17]
Length = 570
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 49/102 (48%), Gaps = 2/102 (1%)
Query: 91 PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPR 150
PSKR +PP E D +++ L+ + L+E F G V + ++V DR +
Sbjct: 168 PSKREGTPPL-TEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSK 226
Query: 151 GSGYVRFKTRADAEKA-QLYMDGFHRLQSLLQLLQREIVREL 191
G GYV FK+ +A QL + ++QL + E R++
Sbjct: 227 GVGYVEFKSEDTVTQALQLTGQKLLGIPIIVQLTEAEKNRQV 268
Score = 39.7 bits (91), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 102 ASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
A T+++S+ LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+++
Sbjct: 274 AGTQSNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKD-DTGRSRGYGFVQYR 332
Query: 159 TRADAEKAQLYMDGF 173
A +A M+GF
Sbjct: 333 DAGQAREALEKMNGF 347
>gi|156841314|ref|XP_001644031.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156114664|gb|EDO16173.1| hypothetical protein Kpol_1026p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 437
Score = 45.8 bits (107), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 103 STENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
S + ++ +++ LS +V++ L+ F + G+V+ ++ +R + RG GYV F +++
Sbjct: 172 SNDGETATIFVGRLSWSVDDEWLKNEFEHIGDVIGARVIYERGTDRSRGYGYVDFSSKSA 231
Query: 163 AEKAQLYMDGFHRLQSLLQLLQREIVRELIMS 194
AE+A M G Q+ REI ++ S
Sbjct: 232 AERAVKEMHG-------KQIDGREINCDMSTS 256
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 54/143 (37%), Gaps = 23/143 (16%)
Query: 24 RSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAAR 83
RSR Y D SS+S + + + R N + P A +
Sbjct: 217 RSRGYGYVD-------FSSKSAAERAVKEMHGKQIDGREINCDMSTSKPAGGNGGDRAKK 269
Query: 84 RGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
G P+ PS L++ +LS N + + E+FS GE++ V L
Sbjct: 270 FGDVPSQPSD----------------TLFLGNLSFNADRDQIYELFSKHGEIISVRLPTH 313
Query: 144 RAVNLPRGSGYVRFKTRADAEKA 166
P+G GYV++ DA+ A
Sbjct: 314 PETEQPKGFGYVQYGNVNDAQSA 336
>gi|354544201|emb|CCE40924.1| hypothetical protein CPAR2_109610 [Candida parapsilosis]
Length = 475
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 72 PQRNKSPAVAARRGRSPAPPSKRASSPPRKAS-TENDSLVLYIDSLSRNVNEGHLREIFS 130
P++ K + + + P K+A S + T+ + ++ LS N+++ L+ F
Sbjct: 201 PKKRKIEELES----TTTPDYKKAKSESTTTTATDEEPATVFAGRLSWNIDDDWLKREFE 256
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ V+ ++M+RA RG GYV F ++A AEKA M G
Sbjct: 257 HLEGVIGARVIMERATGKSRGYGYVDFTSKAAAEKAIEEMQG 298
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS N N L EIF +G V+ L P+G GYV+F + +A+ A
Sbjct: 336 SDTLFIGNLSFNANRDKLFEIFGEYGNVISCRLPTHPDTQQPKGFGYVQFGSVDEAKAAL 395
Query: 168 LYMDG 172
++G
Sbjct: 396 EALNG 400
>gi|432949878|ref|XP_004084303.1| PREDICTED: uncharacterized protein LOC100049528 [Oryzias latipes]
Length = 239
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|403215569|emb|CCK70068.1| hypothetical protein KNAG_0D03220 [Kazachstania naganishii CBS
8797]
Length = 399
Score = 45.4 bits (106), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS + + +L EIF FGE++ V + P+G GYV++ DA+KA
Sbjct: 249 SDTLFLGNLSFDADRDNLYEIFGKFGEIISVRIPTHPETEQPKGFGYVQYTNTEDAKKA 307
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 101 KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTR 160
K S + L++ LS +V++ L+ F+ G VV ++M+R + RG GYV F+
Sbjct: 141 KKSKTQEPATLFVGRLSWSVDDEWLKNEFAPIGGVVSARVIMERGTDRSRGYGYVDFEDI 200
Query: 161 ADAEKAQLYMDG 172
+ AEKA M G
Sbjct: 201 SYAEKALKEMQG 212
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 17/113 (15%)
Query: 66 RSRSPPPQRNKSPAVAA------------RRGRSPAPPSKRASSPPRKASTENDSLVLYI 113
R+RSP +RN + R R P P++ P + D +++
Sbjct: 127 RTRSPRQERNYNRYRERSRDRRRNSSDERRTTRRPQTPAE-----PEVTEDDRDKRTIFV 181
Query: 114 DSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+S+ HLR F G V++ ++V DR +G GYV FK KA
Sbjct: 182 QQISQRAETHHLRTFFERVGPVIEAQIVKDRVTLRSKGVGYVEFKDEESVAKA 234
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAV-NLPRGSGYVRFKTRADAEKAQLY 169
LY+ ++ +V EG LR+IF FG + V L D A +G G+V+F A A+ A
Sbjct: 279 LYVGNIHFSVTEGDLRDIFEPFGALEQVILQRDEANPGRSKGYGFVQFVDPAHAKNALAE 338
Query: 170 MDGFH 174
M+GF
Sbjct: 339 MNGFE 343
>gi|260943806|ref|XP_002616201.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
gi|238849850|gb|EEQ39314.1| hypothetical protein CLUG_03443 [Clavispora lusitaniae ATCC 42720]
Length = 419
Score = 45.4 bits (106), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
L++ LS NV++ L+ F G V+ ++++R+ RG GYV F ++A AEKA
Sbjct: 182 TLFVGRLSWNVDDEWLKREFEEAGGVISARVMIERSTGKSRGYGYVDFSSKAAAEKA 238
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA- 166
S L+I +LS N L EIF +G VV L P+G GYV+F + +A+ A
Sbjct: 281 SDTLFIGNLSFNTERNKLFEIFGEYGTVVSCRLPTHPDTQQPKGFGYVQFSSVEEAQNAL 340
Query: 167 ----QLYMDG 172
Y+DG
Sbjct: 341 NSLNGEYLDG 350
>gi|384491610|gb|EIE82806.1| hypothetical protein RO3G_07511 [Rhizopus delemar RA 99-880]
Length = 249
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 36/65 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S +L + LS E L ++F FG + V +V D N RG G+V FK +ADA +A+
Sbjct: 113 SNILGVFGLSLRTREADLEDVFHEFGTIEKVTIVYDHRTNRSRGFGFVYFKDQADASRAR 172
Query: 168 LYMDG 172
++G
Sbjct: 173 DALNG 177
>gi|324518222|gb|ADY47039.1| Transformer-2 protein beta [Ascaris suum]
Length = 243
Score = 45.4 bits (106), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
L + +S N +E L+ IF +GE+ V+LV DR RG G+V F+T +A +A+ +
Sbjct: 138 CLGVFGMSLNTSERDLKRIFGEYGEIETVQLVYDRYSGRSRGFGFVYFQTTKEAMRAKEH 197
Query: 170 M 170
+
Sbjct: 198 L 198
>gi|344298617|ref|XP_003420988.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Loxodonta
africana]
Length = 416
Score = 45.4 bits (106), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ D+ L D +G G++ F A +A +
Sbjct: 234 LYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALEQL 293
Query: 171 DGFH 174
+GF
Sbjct: 294 NGFE 297
>gi|406694280|gb|EKC97610.1| hypothetical protein A1Q2_08069 [Trichosporon asahii var. asahii
CBS 8904]
Length = 333
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 19/129 (14%)
Query: 66 RSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTE-----NDSLVLYIDSLSRNV 120
R RSP P+R++S RSPA + R +TE N L++ L+R++
Sbjct: 123 RERSPAPRRDRS--------RSPAARNGGGDGGNRGRNTEEGTNSNTGNNLHVSGLARSI 174
Query: 121 NEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLL 180
+ L ++FS G++V +++ RG G+V F+T A+AE+A + G ++ +L
Sbjct: 175 TDRQLEDLFSKCGKIVKAQVMES------RGFGFVMFETNAEAEEAISTLSGTNQEGRVL 228
Query: 181 QLLQREIVR 189
+ + R
Sbjct: 229 TVTHAKRSR 237
>gi|390594976|gb|EIN04384.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 611
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
A E +S +++ LS NV++ L F+ GEVV + +DR RG G+V F +
Sbjct: 336 AEQEEESKTIFVGRLSWNVDDDQLASEFAECGEVVSARVNIDRNTGKSRGFGHVEFADAS 395
Query: 162 DAEKAQLYMDG 172
+KA M+G
Sbjct: 396 SVQKAIDTMNG 406
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
Query: 103 STENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
ST S VL++ +LS + E + E F GEV V L DR P+G GYV F D
Sbjct: 438 STSAPSSVLFVGNLSWDATEDAVWEAFGEHGEVKSVRLPTDRESGRPKGFGYVEF-VDVD 496
Query: 163 AEKAQL 168
A KA
Sbjct: 497 AAKAAF 502
>gi|344298613|ref|XP_003420986.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Loxodonta
africana]
Length = 434
Score = 45.1 bits (105), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ LY+ SL N+ E LR IF FG++ D+ L D +G G++ F A +A
Sbjct: 250 MRLYVGSLHFNITEDMLRGIFEPFGKIDDILLTKDSDTGHSKGYGFITFSDSECARRALE 309
Query: 169 YMDGFH 174
++GF
Sbjct: 310 QLNGFE 315
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Query: 21 SRSRSRSYS-GSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPA 79
SR R R S SRS R RSRS RS S S R + PP A
Sbjct: 65 SRDRDRHRQRNSLSRSRERQHRHRSRSWDHQRSSESRSWDRRREDRVRYRSPPL-----A 119
Query: 80 VAARRGRSPAPPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGE 134
R G S +P R SP R+ + E D+ ++ L+ + L + FS G+
Sbjct: 120 TGRRYGHSKSP-HFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGK 178
Query: 135 VVDVELVMDRAVNLPRGSGYVRF 157
V DV ++ DR +G YV F
Sbjct: 179 VRDVRIISDRNSRRSKGIAYVEF 201
>gi|351706256|gb|EHB09175.1| RNA-binding protein with serine-rich domain 1 [Heterocephalus
glaber]
Length = 305
Score = 45.1 bits (105), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVEL-VMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
++I L RNV + H+ EI S +G++ +++ V +L +G YV F+ +AEKA +
Sbjct: 196 VHIGRLIRNVTKDHIMEISSTYGKIKMIDMPVESMHPHLSKGYAYVEFENPDEAEKALKH 255
Query: 170 MDG 172
MDG
Sbjct: 256 MDG 258
>gi|261203287|ref|XP_002628857.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
gi|239586642|gb|EEQ69285.1| ribonucleoprotein [Ajellomyces dermatitidis SLH14081]
Length = 510
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 97 SPPRKASTEN-DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
+ P+K E+ + L++ +LS NV+E LR F FGE+ V +V DR RG GYV
Sbjct: 246 AAPKKTKVESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYV 305
Query: 156 RFK 158
F
Sbjct: 306 EFV 308
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 86 RSPAPPSKRASSPPR----KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
RS A P +RA S + +AS E+D+L +I ++S + +E + E FS G ++ V L
Sbjct: 338 RSNAAPRERAQSRAQNFGDQASPESDTL--FIGNISFSADENMISEAFSEHGSILGVRLP 395
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D P+G GYV+F + +A A ++G
Sbjct: 396 TDPESGRPKGFGYVQFSSVDEARSAFQTLNG 426
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 45.1 bits (105), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 1/64 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E ++ IFS FG V V+++ D A RG G++ F A++A +
Sbjct: 203 LYVGSLHENITEEMIKGIFSPFGRVEQVQIIKDDA-GASRGYGFITFAEAECAKRALDQL 261
Query: 171 DGFH 174
+GF
Sbjct: 262 NGFE 265
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 45.1 bits (105), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 32/68 (47%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
P E D +++ L+ + LR+ F G VVD ++V DR +G GYV FK
Sbjct: 226 PEPTDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVVDAQIVKDRVSGRSKGVGYVEFK 285
Query: 159 TRADAEKA 166
+KA
Sbjct: 286 DEESVQKA 293
>gi|84996941|ref|XP_953192.1| RNA binding protein [Theileria annulata strain Ankara]
gi|65304188|emb|CAI76567.1| RNA binding protein, putative [Theileria annulata]
Length = 479
Score = 44.7 bits (104), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 69/149 (46%), Gaps = 1/149 (0%)
Query: 26 RSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRG 85
RS+S D S SR +S + + +SSS S T + +S +++
Sbjct: 72 RSFS-IDKNSYSRDKRHQSEASDSEKKTASSSLTSEFTLKKKQSSWDSLTPVSSISPELC 130
Query: 86 RSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
+ + + + + + S +YI +L + +R IFS+FG++++++L D
Sbjct: 131 DTKSLTNNKKTEQSKAQEESQKSAKIYIGALDPSCTIEDIRVIFSSFGDILNIDLPTDPE 190
Query: 146 VNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
N +G +V ++ + A+ A + M GFH
Sbjct: 191 TNKVKGFCFVEYRKKESADLALVSMQGFH 219
>gi|239608318|gb|EEQ85305.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ER-3]
gi|327349518|gb|EGE78375.1| nucleolin protein Nsr1 [Ajellomyces dermatitidis ATCC 18188]
Length = 512
Score = 44.7 bits (104), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 97 SPPRKASTEN-DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
+ P+K E+ + L++ +LS NV+E LR F FGE+ V +V DR RG GYV
Sbjct: 248 AAPKKTKVESSEGGNLFVGNLSWNVDEEWLRSEFEEFGELSGVRIVTDRDSGRSRGFGYV 307
Query: 156 RFK 158
F
Sbjct: 308 EFV 310
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 6/91 (6%)
Query: 86 RSPAPPSKRASSPPR----KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
RS A P +RA S + +AS E+D+L +I ++S + +E + E FS G ++ V L
Sbjct: 340 RSNAAPRERAQSRAQNFGDQASPESDTL--FIGNISFSADENMISEAFSEHGSILGVRLP 397
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D P+G GYV+F + +A A ++G
Sbjct: 398 TDPESGRPKGFGYVQFSSVDEARSAFQTLNG 428
>gi|432881665|ref|XP_004073891.1| PREDICTED: transformer-2 protein homolog alpha-like [Oryzias
latipes]
Length = 268
Score = 44.7 bits (104), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 67/138 (48%), Gaps = 18/138 (13%)
Query: 43 RSRSLSRS---RSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPP 99
RSRS +S RS S S SP R RSR+P + SP RR ++ +P S R
Sbjct: 49 RSRSRRQSNPHRSNSRSCSPQR----RSRTP----SYSPDHRRRRSQNASPMSSRR---- 96
Query: 100 RKASTEND---SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
R T + S L + L+ + E LRE+FS +G + + +V D+ RG ++
Sbjct: 97 RHTGTRENPDPSTCLGVFGLNLSTTERDLREVFSRYGRLTGINMVHDQRTGRSRGFAFIY 156
Query: 157 FKTRADAEKAQLYMDGFH 174
F+ DA +A + +G +
Sbjct: 157 FERLCDAREAIEHTNGMN 174
>gi|158828228|gb|ABW81106.1| putRNAbp29 [Cleome spinosa]
Length = 338
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 35/67 (52%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
EN LY+ LS V + L + FS G+VVDV LV+D RG G+V + DA
Sbjct: 40 ENPGNSLYVTGLSHRVTKRDLEDHFSKEGKVVDVNLVLDPWTRESRGFGFVTMENMEDAN 99
Query: 165 KAQLYMD 171
+ Y+D
Sbjct: 100 RCIKYLD 106
>gi|351697087|gb|EHB00006.1| Putative RNA-binding protein 23 [Heterocephalus glaber]
Length = 436
Score = 44.7 bits (104), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 19 SSSRSRSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSP 78
S SR R R + RS SRS + R S+S SS SRS + R P R
Sbjct: 76 SHSRDRDRH---CERRSGSRSGDRQQRPCSQSWDRPHSSE-SRSQDWRREDYVPYRRLPL 131
Query: 79 AVAARRGRSPAPPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFG 133
A R G S +P R SP R+ + E D+ ++ L+ + L + FS G
Sbjct: 132 ATGWRYGPSKSP-HFRERSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAIG 190
Query: 134 EVVDVELVMDRAVNLPRGSGYVRF 157
+V DV ++ DR +G YV F
Sbjct: 191 KVHDVRIISDRNSRRSKGIAYVEF 214
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ L N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGCLHFNITEDMLRGIFEPFGKIENIVLMKDSETGHSKGYGFITFSESECARRAVEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|440803975|gb|ELR24858.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 964
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLP---RGSGYVRFKTRADAEKAQ 167
LY+ ++S NE LR+ F +G + V+++ R + R SG+V+F+ R DAE+A+
Sbjct: 182 LYVGNVSPQANEELLRKEFGKYGNIYSVKIMWPRTDDEKRRNRNSGFVQFEKREDAERAK 241
Query: 168 LYMDG 172
++G
Sbjct: 242 DALNG 246
>gi|388515619|gb|AFK45871.1| unknown [Medicago truncatula]
Length = 270
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 98 PPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
P R+ + N LY+ LS V + L + FS G+V LV++ + RG +V
Sbjct: 51 PVREVNATNPGNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTM 110
Query: 158 KTRADAEKAQLYMDGFHRLQSLLQ---LLQREIVRELIMSVLILRRMGQNDQENPLPVGS 214
+ DAE+ +++ QS+L+ + R+ + +G + + P G
Sbjct: 111 DSHEDAERCIKHLN-----QSVLEGRYITVERSRRKRARTPTPGHYLGLKNTRDYGPRGD 165
Query: 215 HPPRHGGDLLDLEEVDLRDDHQ 236
H H GD D R DH+
Sbjct: 166 HRGDHRGDFRGDHRGDFRGDHR 187
>gi|357517877|ref|XP_003629227.1| ELAV-like protein [Medicago truncatula]
gi|355523249|gb|AET03703.1| ELAV-like protein [Medicago truncatula]
Length = 270
Score = 44.7 bits (104), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 60/142 (42%), Gaps = 8/142 (5%)
Query: 98 PPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
P R+ + N LY+ LS V + L + FS G+V LV++ + RG +V
Sbjct: 51 PVREVNATNPGNTLYVTGLSSRVTDRDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTM 110
Query: 158 KTRADAEKAQLYMDGFHRLQSLLQ---LLQREIVRELIMSVLILRRMGQNDQENPLPVGS 214
+ DAE+ +++ QS+L+ + R+ + +G + + P G
Sbjct: 111 DSHEDAERCIKHLN-----QSVLEGRYITVERSRRKRARTPTPGHYLGLKNTRDYGPRGD 165
Query: 215 HPPRHGGDLLDLEEVDLRDDHQ 236
H H GD D R DH+
Sbjct: 166 HRGDHRGDFRGDHRGDFRGDHR 187
>gi|310790913|gb|EFQ26446.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 474
Score = 44.7 bits (104), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 98 PPRKASTE--NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYV 155
P +KA T+ + S L++ SL+ V++ L E F F ++ +V D+A RG GYV
Sbjct: 214 PGKKARTDVSDKSSTLFVGSLAWAVDDNSLYEAFQEFADLTGARVVTDKATGRSRGFGYV 273
Query: 156 RFKT 159
F T
Sbjct: 274 DFAT 277
>gi|296214508|ref|XP_002753659.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Callithrix
jacchus]
Length = 439
Score = 44.7 bits (104), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 264 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRAMDQL 323
Query: 171 DGF 173
+GF
Sbjct: 324 NGF 326
Score = 41.2 bits (95), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 6/114 (5%)
Query: 49 RSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRK-----AS 103
RSRS S RS + R R+ A R G S +P R SP R+ +
Sbjct: 101 RSRSWDHRHSEPRSRDHRREDCVHYRSPPLATGHRYGHSKSP-HFREKSPVREPIDNLSP 159
Query: 104 TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
E D+ ++ L+ + L + FS G+V DV ++ DR +G YV F
Sbjct: 160 EERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 213
>gi|9837439|gb|AAG00575.1|AF288041_1 splicing factor arginine/serine rich 2 [Oryzias latipes]
Length = 211
Score = 44.7 bits (104), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A M
Sbjct: 2 LKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYSKESRGFAFVRFFDKRDAEDAMDAM 61
Query: 171 DG 172
DG
Sbjct: 62 DG 63
>gi|312067591|ref|XP_003136815.1| RNA recognition domain-containing protein domain-containing protein
[Loa loa]
Length = 229
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
L + +S N E L+ IF +GE+ V+LV DR RG G+V F+T +A +A+
Sbjct: 122 CLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSRGFGFVYFETTKEAIRAK 179
>gi|170582754|ref|XP_001896271.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158596556|gb|EDP34884.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 267
Score = 44.7 bits (104), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
L + +S N E L+ IF +GE+ V+LV DR RG G+V F+T +A +A+
Sbjct: 160 CLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSRGFGFVYFETTKEAIRAK 217
>gi|393911729|gb|EFO27260.2| RNA recognition domain-containing protein domain-containing protein
[Loa loa]
Length = 267
Score = 44.3 bits (103), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
L + +S N E L+ IF +GE+ V+LV DR RG G+V F+T +A +A+
Sbjct: 160 CLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSRGFGFVYFETTKEAIRAK 217
>gi|410961880|ref|XP_003987506.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Felis catus]
Length = 445
Score = 44.3 bits (103), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 266 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 325
Query: 171 DGFH 174
+GF
Sbjct: 326 NGFE 329
>gi|170582756|ref|XP_001896272.1| RNA recognition motif domain containing protein [Brugia malayi]
gi|158596557|gb|EDP34885.1| RNA recognition motif domain containing protein [Brugia malayi]
Length = 235
Score = 44.3 bits (103), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
L + +S N E L+ IF +GE+ V+LV DR RG G+V F+T +A +A+
Sbjct: 128 CLGVFGMSLNTTERDLKRIFGEYGEIESVQLVYDRYSGRSRGFGFVYFETTKEAIRAK 185
>gi|301781268|ref|XP_002926045.1| PREDICTED: probable RNA-binding protein 23-like isoform 1
[Ailuropoda melanoleuca]
Length = 446
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 267 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 326
Query: 171 DGFH 174
+GF
Sbjct: 327 NGFE 330
>gi|301781270|ref|XP_002926046.1| PREDICTED: probable RNA-binding protein 23-like isoform 2
[Ailuropoda melanoleuca]
Length = 430
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 251 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 310
Query: 171 DGFH 174
+GF
Sbjct: 311 NGFE 314
>gi|410961882|ref|XP_003987507.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Felis catus]
Length = 429
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 250 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 309
Query: 171 DGFH 174
+GF
Sbjct: 310 NGFE 313
>gi|119586626|gb|EAW66222.1| RNA binding motif protein 23, isoform CRA_a [Homo sapiens]
Length = 483
Score = 44.3 bits (103), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A
Sbjct: 307 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 366
Query: 169 YMDGFH 174
++GF
Sbjct: 367 QLNGFE 372
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 30 GSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPA 89
G R SRS R S SRSR R RSPP A R G S +
Sbjct: 139 GRQCRHRSRSWDRRHGSESRSRDHR------REDRVHYRSPPL------ATGYRYGHSKS 186
Query: 90 PPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR 144
P R SP R+ + E D+ ++ L+ + L + FS G+V DV ++ DR
Sbjct: 187 P-HFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDR 245
Query: 145 AVNLPRGSGYVRF 157
+G YV F
Sbjct: 246 NSRRSKGIAYVEF 258
>gi|73962357|ref|XP_537365.2| PREDICTED: probable RNA-binding protein 23 isoform 1 [Canis lupus
familiaris]
Length = 445
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 266 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 325
Query: 171 DGFH 174
+GF
Sbjct: 326 NGFE 329
>gi|115475163|ref|NP_001061178.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|75325377|sp|Q6Z1C0.1|NUCL1_ORYSJ RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa Japonica Group]
gi|51449869|gb|AAU01907.1| putative nucleolin [Oryza sativa Indica Group]
gi|113623147|dbj|BAF23092.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|125602459|gb|EAZ41784.1| hypothetical protein OsJ_26324 [Oryza sativa Japonica Group]
Length = 572
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 8/93 (8%)
Query: 74 RNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFG 133
+ K+PA + P P+ S +S L++ +LS N+N+ ++E F G
Sbjct: 283 KKKTPAATKSQNDEPKTPASNQSQG-------TESATLFMGNLSFNLNQDQVKEFFQEVG 335
Query: 134 EVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
EV+ V L RG G+V+F + +A+KA
Sbjct: 336 EVISVRLATHED-GSSRGFGHVQFASSEEAKKA 367
>gi|149756182|ref|XP_001494921.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Equus
caballus]
Length = 412
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 234 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 293
Query: 171 DGFH 174
+GF
Sbjct: 294 NGFE 297
>gi|402875680|ref|XP_003901625.1| PREDICTED: probable RNA-binding protein 23 [Papio anubis]
Length = 497
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 320 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 379
Query: 171 DGFH 174
+GF
Sbjct: 380 NGFE 383
>gi|149756180|ref|XP_001494897.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Equus
caballus]
Length = 430
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 252 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 311
Query: 171 DGFH 174
+GF
Sbjct: 312 NGFE 315
Score = 37.7 bits (86), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 40/94 (42%), Gaps = 12/94 (12%)
Query: 69 SPPPQRNKSPAVAARRGRSPAPPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEG 123
SPPP V RR P R SP R+ + E D+ ++ L+ +
Sbjct: 115 SPPP-------VTGRRYGQSKSPHFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPR 167
Query: 124 HLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
L + FS G+V DV ++ DR +G YV F
Sbjct: 168 DLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 201
>gi|73962355|ref|XP_848788.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Canis lupus
familiaris]
Length = 429
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 250 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 309
Query: 171 DGFH 174
+GF
Sbjct: 310 NGFE 313
>gi|384252120|gb|EIE25597.1| splicing factor, CC1-like protein [Coccomyxa subellipsoidea C-169]
Length = 497
Score = 44.3 bits (103), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 63/161 (39%), Gaps = 15/161 (9%)
Query: 6 RGRRSPPSRSASGSSSRSRSRSYSGSDSRSSSRSLSSRS----RSLSRSRSLSSSSSPSR 61
R +R R+ S R R+R D +SS R +S R S S R
Sbjct: 30 REKREKKDRTRDRDSERERTRD-QDRDRKSSKREHRDKSPDRERKRHHSSHDHHRSERDR 88
Query: 62 STNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVN 121
+SR RS + RR R+P ++ + D ++ +L
Sbjct: 89 KHSSRPRS----------LEKRRERTPPEVREQREKERELKELDRDIRTVFAYNLPLKAE 138
Query: 122 EGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
E L E FS G + DV+++MDR +G Y+ + +AD
Sbjct: 139 ERDLFEFFSKAGPIEDVKIIMDRNTRKSKGFAYIEYTNKAD 179
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LYI +L N+ E L+++F FG V + L D +G G+V+++T DA KA +
Sbjct: 235 LYIGNLHPNIQEQDLKQVFEAFGAVEYITLQKD-PTGRSQGYGFVQYQTTPDATKAMQQL 293
Query: 171 DGF 173
DG
Sbjct: 294 DGL 296
>gi|332222976|ref|XP_003260645.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Nomascus
leucogenys]
Length = 442
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|197102126|ref|NP_001124751.1| probable RNA-binding protein 23 [Pongo abelii]
gi|55725769|emb|CAH89665.1| hypothetical protein [Pongo abelii]
Length = 423
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
>gi|440796160|gb|ELR17269.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 1122
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 34/62 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+++ L ++VNE L F+N GE+ ++ L+ D +G +VRF + A+ A +
Sbjct: 403 VFVGGLGKDVNEADLYSAFANVGEIFEIRLMKDATTGESKGYAFVRFTSPKFAKLAVQQV 462
Query: 171 DG 172
DG
Sbjct: 463 DG 464
>gi|337926|gb|AAA60306.1| splicing factor [Homo sapiens]
Length = 221
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR +F + V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKYRRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|383419607|gb|AFH33017.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|389633057|ref|XP_003714181.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|351646514|gb|EHA54374.1| nuclear localization sequence binding protein [Magnaporthe oryzae
70-15]
gi|440473688|gb|ELQ42470.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae Y34]
gi|440486239|gb|ELQ66126.1| 28 kDa ribonucleoprotein [Magnaporthe oryzae P131]
Length = 486
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ-- 167
L++ +LS NV++ L E F G V ++ DR +G GYV F T +AEKA
Sbjct: 240 TLFVGNLSWNVDDAMLAEEFKFCGTVTSARVITDRESGRSKGFGYVDFATPEEAEKAHGE 299
Query: 168 ---LYMDG 172
++DG
Sbjct: 300 KQGAFIDG 307
>gi|388490330|ref|NP_001253303.1| probable RNA-binding protein 23 [Macaca mulatta]
gi|380814244|gb|AFE78996.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
gi|384947950|gb|AFI37580.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 441
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|387539272|gb|AFJ70263.1| putative RNA-binding protein 23 isoform 1 [Macaca mulatta]
Length = 439
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|355693134|gb|EHH27737.1| hypothetical protein EGK_18008 [Macaca mulatta]
Length = 441
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D N RG G+V+F+ A +A M
Sbjct: 260 LYVGNIHFNVTEQDLQAVFDPFGELEFVQLQKDE-TNRSRGYGFVQFRDAGQAREALEKM 318
Query: 171 DGF 173
+GF
Sbjct: 319 NGF 321
>gi|116734696|ref|NP_001070819.1| probable RNA-binding protein 23 isoform 1 [Homo sapiens]
gi|34925229|sp|Q86U06.1|RBM23_HUMAN RecName: Full=Probable RNA-binding protein 23; AltName:
Full=RNA-binding motif protein 23; AltName:
Full=RNA-binding region-containing protein 4; AltName:
Full=Splicing factor SF2
gi|28071058|emb|CAD61910.1| unnamed protein product [Homo sapiens]
gi|119586629|gb|EAW66225.1| RNA binding motif protein 23, isoform CRA_d [Homo sapiens]
Length = 439
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A
Sbjct: 263 MRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALE 322
Query: 169 YMDGFH 174
++GF
Sbjct: 323 QLNGFE 328
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 30 GSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPA 89
G R SRS R S SRSR R RSPP A R G S +
Sbjct: 95 GRQCRHRSRSWDRRHGSESRSRD------HRREDRVHYRSPPL------ATGYRYGHSKS 142
Query: 90 PPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR 144
P R SP R+ + E D+ ++ L+ + L + FS G+V DV ++ DR
Sbjct: 143 P-HFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDR 201
Query: 145 AVNLPRGSGYVRF 157
+G YV F
Sbjct: 202 NSRRSKGIAYVEF 214
>gi|405967042|gb|EKC32256.1| Splicing factor, arginine/serine-rich 2 [Crassostrea gigas]
Length = 183
Score = 43.9 bits (102), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ LR F +G+V DV + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTTPEDLRRAFDKYGDVGDVYIPRDRFTRESRGFAFVRFYDKRDAEDALDSM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|397473311|ref|XP_003808158.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Pan paniscus]
Length = 426
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 57 SSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRK-----ASTENDSLVL 111
SS SRS + R R+ A R G S +P R SP R+ + E D+ +
Sbjct: 94 SSESRSWDHRREDRVHYRSPPLATGYRYGHSKSP-HFREKSPVREPIDNLSPEERDARTV 152
Query: 112 YIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+ L+ + L + FS G+V DV ++ DR +G YV F
Sbjct: 153 FCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 198
>gi|397473313|ref|XP_003808159.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Pan paniscus]
Length = 442
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 47/106 (44%), Gaps = 6/106 (5%)
Query: 57 SSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRK-----ASTENDSLVL 111
SS SRS + R R+ A R G S +P R SP R+ + E D+ +
Sbjct: 110 SSESRSWDHRREDRVHYRSPPLATGYRYGHSKSP-HFREKSPVREPIDNLSPEERDARTV 168
Query: 112 YIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+ L+ + L + FS G+V DV ++ DR +G YV F
Sbjct: 169 FCMQLAARIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEF 214
>gi|363807232|ref|NP_001242100.1| uncharacterized protein LOC100779321 [Glycine max]
gi|255635455|gb|ACU18080.1| unknown [Glycine max]
Length = 253
Score = 43.9 bits (102), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 32/62 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L + +L + LR F FG + D+ L D PRG G+V+F ADA A+ +M
Sbjct: 43 LLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQFVDPADAADAKYHM 102
Query: 171 DG 172
DG
Sbjct: 103 DG 104
>gi|118377504|ref|XP_001021930.1| polyadenylate-binding protein [Tetrahymena thermophila]
gi|89303697|gb|EAS01685.1| polyadenylate-binding protein [Tetrahymena thermophila SB210]
Length = 803
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 85 GRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD- 143
+S K S R+ N LYI +LS V + L++IFS +G V + +
Sbjct: 410 NQSKNIRQKTVYSEKRQMDQVNKGSCLYISNLSHKVTDQQLKKIFSTYGRVEYANICYEP 469
Query: 144 -----RAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
R +PRG G+V++ +DA KA +DG
Sbjct: 470 YSQQQRGQKIPRGIGFVKYARNSDALKAIEELDG 503
>gi|366988347|ref|XP_003673940.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
gi|342299803|emb|CCC67559.1| hypothetical protein NCAS_0A10010 [Naumovozyma castellii CBS 4309]
Length = 506
Score = 43.9 bits (102), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 101 KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTR 160
KA + L+I L+ E L++ FS +G VVD++++ D A RG G++ F+
Sbjct: 185 KADLSKECCKLFIGGLNWETTEDKLKDYFSKYGNVVDLKIMKDNATGRSRGFGFLTFELS 244
Query: 161 ADAE---KAQLYMDG 172
+ + K Q +DG
Sbjct: 245 SSVDEVVKTQHILDG 259
>gi|302694499|ref|XP_003036928.1| hypothetical protein SCHCODRAFT_63824 [Schizophyllum commune H4-8]
gi|300110625|gb|EFJ02026.1| hypothetical protein SCHCODRAFT_63824 [Schizophyllum commune H4-8]
Length = 259
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 44/91 (48%), Gaps = 4/91 (4%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELV 141
AR RSP PP + + +P N + VL + LS E L E FS FG V V +V
Sbjct: 54 ARSVRSPVPPKRPSHAP----IAPNPTQVLGVFGLSIRTEERDLDEEFSRFGTVEKVTIV 109
Query: 142 MDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
D+ RG G++R T +A + ++G
Sbjct: 110 YDQRSGRSRGFGFIRMSTVEEATRCIQELNG 140
>gi|45198625|ref|NP_985654.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|44984635|gb|AAS53478.1| AFR107Wp [Ashbya gossypii ATCC 10895]
gi|374108884|gb|AEY97790.1| FAFR107Wp [Ashbya gossypii FDAG1]
Length = 396
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 100 RKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
+K T+ +++ LS +V++ L+ F + G VV ++ +R + RG GYV F+
Sbjct: 158 KKQKTDGQPATIFVGRLSWSVDDEWLKTEFDHIGGVVGARVIYERGTDKSRGYGYVDFED 217
Query: 160 RADAEKAQLYMDG 172
+ AEKA M G
Sbjct: 218 VSYAEKAVKEMHG 230
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 46/97 (47%), Gaps = 13/97 (13%)
Query: 78 PAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVD 137
PA A R R+ K +P + + T L++ +LS N + L E+FS G V+
Sbjct: 247 PASAPREDRA----KKYGDTPSQPSDT------LFLGNLSFNADRDALFELFSKHGNVIS 296
Query: 138 VELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
V + N P+G GYV++ + E+AQ +D
Sbjct: 297 VRIPTHPESNQPKGFGYVQYGS---VEEAQAALDALQ 330
>gi|391345479|ref|XP_003747013.1| PREDICTED: transformer-2 protein homolog beta-like [Metaseiulus
occidentalis]
Length = 242
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S + + LS NE LR+ F +G V DV++V D RG G+V +++ DA +A+
Sbjct: 84 SRCIGVFGLSIYTNERELRDFFGKYGRVEDVQVVYDAQTGRSRGFGFVYYESEDDAHEAK 143
Query: 168 LYMDG 172
+G
Sbjct: 144 EKANG 148
>gi|198473023|ref|XP_002133161.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
gi|198139264|gb|EDY70563.1| GA28809 [Drosophila pseudoobscura pseudoobscura]
Length = 692
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L ++ L + +++ +R +F +FGEV +L+ D+ G G+V + + DAEKA +
Sbjct: 121 LIVNYLPQTMSQDEIRSLFVSFGEVESCKLIRDKVTGQSLGYGFVNYVKQEDAEKAINAL 180
Query: 171 DGFHRLQS 178
+G RLQ+
Sbjct: 181 NGL-RLQN 187
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/67 (26%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN-----LPRGSGYVRFKTRADAEK 165
LY+ L +N+ + L +FS +G+++ ++ D + L +G G++RF R +A++
Sbjct: 207 LYVSGLPKNMTQSDLESLFSPYGKIITSRILCDNITDEHAPGLSKGVGFIRFDQRFEADR 266
Query: 166 AQLYMDG 172
A ++G
Sbjct: 267 AIKELNG 273
>gi|449461647|ref|XP_004148553.1| PREDICTED: RNA-binding protein 28-like [Cucumis sativus]
Length = 966
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 69 SPPPQRNKSPAVAARR---------GRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRN 119
+PP + NK P + + P S+ +S ++ E+ +YI +L +
Sbjct: 466 NPPSKVNKEPDFDSSKKSSDMSDKVSNEPGKLSESKTSILKQTDEEDLKRTVYIGNLPFD 525
Query: 120 VNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
++ +++ FS FGEV+ V+ + P+G+G+++FKT ADA
Sbjct: 526 IDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKT-ADA 568
>gi|426376372|ref|XP_004054975.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Gorilla
gorilla gorilla]
Length = 437
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E LR +F FGE+ V+L D + + RG G+V+F+ A +A M
Sbjct: 271 LYVGNIHFNVTEEDLRAVFEPFGELEFVQLQKDES-DRSRGYGFVQFRDATQAREALEKM 329
Query: 171 DGF 173
+GF
Sbjct: 330 NGF 332
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 30/62 (48%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
+ P+ E D +++ L+ + L+E F G V + ++V DR +G GYV
Sbjct: 158 ATPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGVGYVE 217
Query: 157 FK 158
FK
Sbjct: 218 FK 219
>gi|426376370|ref|XP_004054974.1| PREDICTED: probable RNA-binding protein 23 isoform 1 [Gorilla
gorilla gorilla]
Length = 421
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
>gi|298504119|gb|ADI86271.1| putative transformer-2 protein [Stomoxys calcitrans]
Length = 237
Score = 43.5 bits (101), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
L + LS N + +REIF FG + +++VMD RG ++ +K ADAE A+
Sbjct: 110 CLGVFGLSVNTTQPQIREIFGKFGPIESIQVVMDAQTRRSRGFCFIYYKYLADAEAAR 167
>gi|356553015|ref|XP_003544854.1| PREDICTED: uncharacterized protein LOC100775883 isoform 1 [Glycine
max]
gi|356553017|ref|XP_003544855.1| PREDICTED: uncharacterized protein LOC100775883 isoform 2 [Glycine
max]
Length = 249
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L + +L + LR F FG + D+ L D PRG G+V++ ADA A+ +M
Sbjct: 43 LLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHM 102
Query: 171 DG 172
DG
Sbjct: 103 DG 104
>gi|300176090|emb|CBK23401.2| unnamed protein product [Blastocystis hominis]
Length = 259
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 48/111 (43%), Gaps = 21/111 (18%)
Query: 65 SRSRSPPPQRNKSPAV---AARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVN 121
SRSR P P R++SP A R G +P + L + V+
Sbjct: 73 SRSREPTPVRSRSPVRRGGAERYGTNP------------------NHCSLIVRGFRDVVD 114
Query: 122 EGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
++ IFS +G V DV + D + RG ++ F+ R AE A ++DG
Sbjct: 115 RSEIQNIFSKYGNVHDVHIPRDYYTHKQRGFAFIEFENREQAEDAISHLDG 165
>gi|114652057|ref|XP_001159475.1| PREDICTED: probable RNA-binding protein 23 isoform 10 [Pan
troglodytes]
Length = 442
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|395863336|ref|XP_003803852.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
gi|395863340|ref|XP_003803854.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Otolemur
garnettii]
Length = 514
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG + ++L+ D +G G++ F A+KA +
Sbjct: 237 LYVGSLHLNITEAMLRGIFEPFGRLESIQLMKDSETGRSKGYGFITFSDSECAKKALEQL 296
Query: 171 DGFH 174
+G
Sbjct: 297 NGLE 300
>gi|410218752|gb|JAA06595.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307724|gb|JAA32462.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307728|gb|JAA32464.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|114652069|ref|XP_001159523.1| PREDICTED: probable RNA-binding protein 23 isoform 11 [Pan
troglodytes]
Length = 426
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
>gi|347441280|emb|CCD34201.1| hypothetical protein [Botryotinia fuckeliana]
Length = 492
Score = 43.5 bits (101), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 83 RRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
+R P + S + + +N S L++ +LS N+++ L F FGE+ ++
Sbjct: 214 KRKAEDEPEASTKKSKTEETAEDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGARVIS 273
Query: 143 DRAVNLPRGSGYVRFKTRAD 162
D+A +G GYV F +D
Sbjct: 274 DKATGRSKGFGYVEFVKSSD 293
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS + +E + E F G VV+V L D+ P+G GYV F + DA A
Sbjct: 343 SDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAY 402
Query: 168 LYMDG 172
M G
Sbjct: 403 DAMMG 407
>gi|410261842|gb|JAA18887.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349771|gb|JAA41489.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 442
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 265 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 324
Query: 171 DGFH 174
+GF
Sbjct: 325 NGFE 328
>gi|301624539|ref|XP_002941556.1| PREDICTED: RNA-binding protein 39 [Xenopus (Silurana) tropicalis]
Length = 420
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ +++L+ + +G G++ F A +A +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
>gi|300123623|emb|CBK24895.2| unnamed protein product [Blastocystis hominis]
Length = 465
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 46/106 (43%), Gaps = 13/106 (12%)
Query: 61 RSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNV 120
R R RSPP R+++ + +R + S D +++ L V
Sbjct: 74 RDHRDRDRSPP-HRSRNDS------------RRRGDDEGNEESLTRDIRTVFVSDLQVKV 120
Query: 121 NEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+E LR F G V ++L+ DR N +G GY+ T+ DA KA
Sbjct: 121 DEKWLRHYFEQAGTVKSIKLIRDRYSNRSKGMGYIEMATQEDAAKA 166
>gi|384498450|gb|EIE88941.1| hypothetical protein RO3G_13652 [Rhizopus delemar RA 99-880]
Length = 454
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LYI SL ++ E +R+IF FG + V L D +G G++++K DA++A M
Sbjct: 226 LYIGSLHFSLTENDVRQIFEPFGPLDFVNLHKDPETGRSKGFGFIQYKNANDAKQALEKM 285
Query: 171 DGFH 174
+GF
Sbjct: 286 NGFE 289
>gi|410218750|gb|JAA06594.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410307726|gb|JAA32463.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
>gi|291403541|ref|XP_002718109.1| PREDICTED: RNA binding motif protein 23 isoform 2 [Oryctolagus
cuniculus]
Length = 444
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 34/66 (51%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F +A
Sbjct: 265 LRLYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECGRRALE 324
Query: 169 YMDGFH 174
++GF
Sbjct: 325 QLNGFE 330
>gi|254585491|ref|XP_002498313.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
gi|238941207|emb|CAR29380.1| ZYRO0G07326p [Zygosaccharomyces rouxii]
Length = 468
Score = 43.5 bits (101), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%)
Query: 100 RKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
+KA + +++ LS N+++ L+ F + G V ++ +R RG GYV F
Sbjct: 227 KKAKLSGEPATIFVGRLSWNIDDQWLKNEFEHIGGVQSARVIYERGSTRSRGYGYVDFTD 286
Query: 160 RADAEKAQLYMDG 172
++ AEKA M G
Sbjct: 287 KSYAEKAVKEMHG 299
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+FS GEV+ V + P+G GYV++ + A+KA
Sbjct: 336 SDTLFLGNLSFNADRDQIYELFSPHGEVISVRIPTHPETEQPKGFGYVQYASVDSAQKA 394
>gi|410261840|gb|JAA18886.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349769|gb|JAA41488.1| RNA binding motif protein 23 [Pan troglodytes]
gi|410349773|gb|JAA41490.1| RNA binding motif protein 23 [Pan troglodytes]
Length = 426
Score = 43.5 bits (101), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 249 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGHSKGYGFITFSDSECARRALEQL 308
Query: 171 DGFH 174
+GF
Sbjct: 309 NGFE 312
>gi|440791603|gb|ELR12841.1| splicing factor, CC1like subfamily protein [Acanthamoeba
castellanii str. Neff]
Length = 594
Score = 43.1 bits (100), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ +L ++ E LR +F FG++ + L +D +G +V++K+ DA+KA +
Sbjct: 273 LYVGNLHTDLAEDDLRTVFEPFGDIQQINLHIDPETGRSKGFAFVQYKSPEDAKKALQHC 332
Query: 171 DGFH 174
+G
Sbjct: 333 NGME 336
>gi|213401557|ref|XP_002171551.1| gar2 [Schizosaccharomyces japonicus yFS275]
gi|211999598|gb|EEB05258.1| gar2 [Schizosaccharomyces japonicus yFS275]
Length = 449
Score = 43.1 bits (100), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 3/80 (3%)
Query: 93 KRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGS 152
+RAS+ K S +D++ +I +LS N E +R FS+ GE+ V L D P+G
Sbjct: 296 QRASNFGDKQSPPSDTV--FIGNLSFNATEDDVRNAFSSCGEIQSVRLPTDMNSGRPKGF 353
Query: 153 GYVRFKTRADAEKAQLYMDG 172
GYV F + DA K + M+G
Sbjct: 354 GYVTFDS-IDAAKQCVEMNG 372
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 44/76 (57%), Gaps = 2/76 (2%)
Query: 98 PPRKASTEN-DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
P + A +E+ +S +++ LS NV++ L + F +G VV+ ++MD +G GYV
Sbjct: 194 PQKAAKSESGESCTVFVGRLSWNVDDEWLGKEFEEYGTVVNARVIMDGQSGRSKGFGYVD 253
Query: 157 FKTRADAEKAQLYMDG 172
F + +A KA + ++G
Sbjct: 254 FDS-PEAAKAAVAVNG 268
>gi|300120701|emb|CBK20255.2| RNA binding protein [Blastocystis hominis]
Length = 313
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 52/119 (43%), Gaps = 27/119 (22%)
Query: 59 PSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSR 118
PSR +SRSR KR +S E ++ D LS
Sbjct: 27 PSRE-DSRSRH----------------------DKRENSLSNTEDNEGQDKIVVKD-LSS 62
Query: 119 NVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQ 177
NV+E HL+EIF +FGEV DV + ++ G+ Y+ + D EKA + G H+ Q
Sbjct: 63 NVSEKHLKEIFGHFGEVKDVSIQYLPHSSISSGTAYIVMASEEDVEKA---VKGMHKGQ 118
>gi|294460169|gb|ADE75667.1| unknown [Picea sitchensis]
Length = 216
Score = 43.1 bits (100), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS V E L E+FS G+VVD +V+D RG G+V T +A++ Y+
Sbjct: 65 LYVTGLSARVVEADLEELFSQEGKVVDCRIVVDPRSRESRGFGFVTMDTLENADRCVKYL 124
Query: 171 D 171
+
Sbjct: 125 N 125
>gi|154296105|ref|XP_001548485.1| hypothetical protein BC1G_12782 [Botryotinia fuckeliana B05.10]
Length = 518
Score = 43.1 bits (100), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 39/80 (48%)
Query: 83 RRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
+R P + S + + +N S L++ +LS N+++ L F FGE+ ++
Sbjct: 240 KRKAEDEPEASTKKSKTEETAEDNGSKNLFVGNLSWNIDDEWLYREFEEFGEISGARVIS 299
Query: 143 DRAVNLPRGSGYVRFKTRAD 162
D+A +G GYV F +D
Sbjct: 300 DKATGRSKGFGYVEFVKSSD 319
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 34/65 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS + +E + E F G VV+V L D+ P+G GYV F + DA A
Sbjct: 369 SDTLFLGNLSFDADENVVGEAFGEHGTVVNVRLPTDQETGNPKGFGYVTFGSVEDATAAY 428
Query: 168 LYMDG 172
M G
Sbjct: 429 DAMMG 433
>gi|449516393|ref|XP_004165231.1| PREDICTED: RNA-binding protein 28-like, partial [Cucumis sativus]
Length = 678
Score = 43.1 bits (100), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 53/104 (50%), Gaps = 10/104 (9%)
Query: 69 SPPPQRNKSPAVAARR---------GRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRN 119
+PP + NK P + + P S+ +S ++ E+ +YI +L +
Sbjct: 178 NPPSKVNKEPDFDSSKKSSDMSDKVSNEPGKLSESKTSILKQTDEEDLKRTVYIGNLPFD 237
Query: 120 VNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADA 163
++ +++ FS FGEV+ V+ + P+G+G+++FKT ADA
Sbjct: 238 IDNEEVKQRFSGFGEVLSFVPVLHQVTKRPKGTGFLKFKT-ADA 280
>gi|321257332|ref|XP_003193552.1| hypothetical protein CGB_D4310W [Cryptococcus gattii WM276]
gi|317460022|gb|ADV21765.1| Conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 253
Score = 43.1 bits (100), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 103 STENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
+T N L++ LSR V E L ++FS G+V V++++D RG G+V ++R +
Sbjct: 64 NTANQGNNLHVSGLSRAVTERQLEDLFSQIGKVAKVQIMVDPHSQESRGFGFVMMESREE 123
Query: 163 AEKA 166
A+ A
Sbjct: 124 AQAA 127
>gi|391346651|ref|XP_003747583.1| PREDICTED: RNA-binding protein with serine-rich domain 1-A-like
[Metaseiulus occidentalis]
Length = 277
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 65/128 (50%), Gaps = 11/128 (8%)
Query: 49 RSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRAS---SPPRKASTE 105
RS +++S S R + R RS +P + S SP R
Sbjct: 68 RSPKKAAASRGGGSGRRSPSRSRSPRKDRSRSRSPRRRSRSPKRRSKSHSLSPLR----- 122
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAV-NLPRGSGYVRFKTRADAE 164
S +++ L+RNV + H++EIFS+FG + V+++M+R ++ RG+ YV F+T +A
Sbjct: 123 --SQKVHVGRLTRNVTKDHIKEIFSHFGTISTVDMIMERHHPHISRGTCYVEFETHEEAS 180
Query: 165 KAQLYMDG 172
KA YMDG
Sbjct: 181 KAIKYMDG 188
>gi|346471403|gb|AEO35546.1| hypothetical protein [Amblyomma maculatum]
Length = 271
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
N S L + LS E L+E+FS +G + DV++V D RG +V F+T DA+
Sbjct: 122 NTSRCLGVFGLSLYTQERDLKEVFSKYGPLEDVQVVYDAQSGRSRGFAFVYFETVEDAKA 181
Query: 166 AQLYMDGFH 174
A+ +G
Sbjct: 182 AKDRCNGLE 190
>gi|406700097|gb|EKD03282.1| hypothetical protein A1Q2_02392 [Trichosporon asahii var. asahii
CBS 8904]
Length = 387
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
L+I SL + E H+ E F +G+V V L DR +G GYV F A A A
Sbjct: 303 TLWIGSLPFDTTEDHIYETFGEYGDVQSVRLPTDRETGAAKGFGYVTFGDVAQATAALEA 362
Query: 170 MDG 172
++G
Sbjct: 363 LNG 365
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+++ LS N++ L F++ GEVV +V+DR RG GYV F
Sbjct: 205 TVFVGGLSWNIDNDWLASEFASCGEVVSARIVLDRDTQRSRGFGYVEF 252
>gi|363754371|ref|XP_003647401.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891038|gb|AET40584.1| hypothetical protein Ecym_6201 [Eremothecium cymbalariae
DBVPG#7215]
Length = 448
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + ++ E+F ++G ++ V + N P+G GYV++ + +A+KA
Sbjct: 311 SDTLFLGNLSFNADRDNIFELFKDYGSIISVRIPTHPETNQPKGFGYVQYASIEEAQKA 369
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 38/72 (52%)
Query: 101 KASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTR 160
K + + +++ LS ++++ L+ F + G V+ ++ +R RG GYV F+ +
Sbjct: 203 KKDSPTEPATIFVGRLSWSIDDEWLKTEFEHIGGVISARVIYERGTERSRGYGYVDFEDK 262
Query: 161 ADAEKAQLYMDG 172
+ AEKA M G
Sbjct: 263 SYAEKAIKEMQG 274
>gi|395859409|ref|XP_003802032.1| PREDICTED: probable RNA-binding protein 23 [Otolemur garnettii]
Length = 449
Score = 42.7 bits (99), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 270 LFVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQL 329
Query: 171 DGFH 174
+GF
Sbjct: 330 NGFE 333
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E LRE+FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 106 NCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK 165
Query: 168 LYMDGF 173
+G
Sbjct: 166 ERANGM 171
>gi|148231281|ref|NP_001085808.1| RNA binding motif protein 23 [Xenopus laevis]
gi|49118375|gb|AAH73374.1| MGC80803 protein [Xenopus laevis]
Length = 416
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ +++L+ + +G G++ F A +A +
Sbjct: 252 LYVGSLHFNITEEMLRGIFEPFGKIENIQLLKEPDTGRSKGFGFITFTDAECARRALEQL 311
Query: 171 DGF 173
+GF
Sbjct: 312 NGF 314
>gi|259146662|emb|CAY79919.1| Nsr1p [Saccharomyces cerevisiae EC1118]
Length = 414
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G V+ ++ +R + RG GYV F+ ++ AEKA
Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228
Query: 170 MDG 172
M G
Sbjct: 229 MQG 231
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+F+ GEVV V + P+G GYV+F DA+KA
Sbjct: 266 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 324
>gi|190406825|gb|EDV10092.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae RM11-1a]
gi|207345058|gb|EDZ72003.1| YGR159Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272028|gb|EEU07041.1| Nsr1p [Saccharomyces cerevisiae JAY291]
gi|323354844|gb|EGA86677.1| Nsr1p [Saccharomyces cerevisiae VL3]
gi|365765431|gb|EHN06939.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G V+ ++ +R + RG GYV F+ ++ AEKA
Sbjct: 171 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 230
Query: 170 MDG 172
M G
Sbjct: 231 MQG 233
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+F+ GEVV V + P+G GYV+F DA+KA
Sbjct: 268 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 326
>gi|151943436|gb|EDN61747.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae YJM789]
Length = 418
Score = 42.7 bits (99), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G V+ ++ +R + RG GYV F+ ++ AEKA
Sbjct: 173 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 232
Query: 170 MDG 172
M G
Sbjct: 233 MQG 235
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+F+ GEVV V + P+G GYV+F DA+KA
Sbjct: 270 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 328
>gi|349578366|dbj|GAA23532.1| K7_Nsr1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 416
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G V+ ++ +R + RG GYV F+ ++ AEKA
Sbjct: 171 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 230
Query: 170 MDG 172
M G
Sbjct: 231 MQG 233
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+F+ GEVV V + P+G GYV+F DA+KA
Sbjct: 268 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 326
>gi|6321599|ref|NP_011675.1| Nsr1p [Saccharomyces cerevisiae S288c]
gi|128576|sp|P27476.1|NSR1_YEAST RecName: Full=Nuclear localization sequence-binding protein;
AltName: Full=p67
gi|4058|emb|CAA40472.1| nuclear localization sequence binding protein [Saccharomyces
cerevisiae]
gi|1045265|emb|CAA59817.1| NSR1 [Saccharomyces cerevisiae]
gi|1323271|emb|CAA97173.1| NSR1 [Saccharomyces cerevisiae]
gi|285812350|tpg|DAA08250.1| TPA: Nsr1p [Saccharomyces cerevisiae S288c]
gi|392299413|gb|EIW10507.1| Nsr1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 414
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G V+ ++ +R + RG GYV F+ ++ AEKA
Sbjct: 169 TIFVGRLSWSIDDEWLKKEFEHIGGVIGARVIYERGTDRSRGYGYVDFENKSYAEKAIQE 228
Query: 170 MDG 172
M G
Sbjct: 229 MQG 231
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+F+ GEVV V + P+G GYV+F DA+KA
Sbjct: 266 SDTLFLGNLSFNADRDAIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSNMEDAKKA 324
>gi|401842356|gb|EJT44580.1| NSR1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 393
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G V+ ++ +R + RG GYV F+ ++ AEKA
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 170 MDG 172
M G
Sbjct: 202 MQG 204
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS N + + E+F+ GEVV V + P+G GYV+F + D++KA
Sbjct: 241 SDTLFLGNLSFNADRDTIFELFAKHGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKA 299
>gi|327289313|ref|XP_003229369.1| PREDICTED: probable RNA-binding protein 23-like [Anolis
carolinensis]
Length = 445
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ + LR IF FG++ + L+ D+ +G G++ F A +A +
Sbjct: 268 LYVGSLHCNITKEMLRGIFEPFGKIDSIVLMRDQDTGQSKGYGFITFSEAECARRALEQL 327
Query: 171 DGFH 174
+GF
Sbjct: 328 NGFE 331
>gi|255644989|gb|ACU22994.1| unknown [Glycine max]
Length = 214
Score = 42.7 bits (99), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L + +L + LR F FG + D+ L D PRG G+V++ ADA A+ +M
Sbjct: 43 LLVRNLRHDCRPEDLRRPFGQFGPLKDIYLPKDYYTGEPRGFGFVQYVDPADAADAKYHM 102
Query: 171 DG 172
DG
Sbjct: 103 DG 104
>gi|405120315|gb|AFR95086.1| hypothetical protein CNAG_01060 [Cryptococcus neoformans var.
grubii H99]
Length = 260
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 103 STENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRAD 162
+T N L++ LSR V E L ++FS G+V V++++D RG G+V ++R +
Sbjct: 64 NTANQGNNLHVSGLSRAVTERQLEDLFSQIGKVAKVQIMVDPHSQESRGFGFVMMESREE 123
Query: 163 AEKA 166
A+ A
Sbjct: 124 AQAA 127
>gi|297742216|emb|CBI34365.3| unnamed protein product [Vitis vinifera]
Length = 133
Score = 42.7 bits (99), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS VN L + F++ G+VV+ LV D RG G+V +T DA++ Y+
Sbjct: 56 LYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYL 115
Query: 171 D 171
+
Sbjct: 116 N 116
>gi|389744399|gb|EIM85582.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 262
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
N S VL I LS E L + FS FG V V +V D+ + RG G+++ T A+AEK
Sbjct: 72 NPSNVLGIFGLSIRTTERDLDDEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVAEAEK 131
Query: 166 AQLYMDG 172
++G
Sbjct: 132 CIQELNG 138
>gi|225426196|ref|XP_002279684.1| PREDICTED: uncharacterized RNA-binding protein C25G10.01 [Vitis
vinifera]
Length = 211
Score = 42.7 bits (99), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS VN L + F++ G+VV+ LV D RG G+V +T DA++ Y+
Sbjct: 56 LYVTGLSTRVNASDLEKYFNSEGKVVECHLVTDPRTRESRGFGFVTMETVEDADRCIKYL 115
Query: 171 D 171
+
Sbjct: 116 N 116
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 42.7 bits (99), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 97 SPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
S PR+ S ND +++ L+ + L+E F G V + ++V DR N +G G
Sbjct: 215 STPREPSPTNDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVG 274
Query: 154 YVRFKT 159
YV FK+
Sbjct: 275 YVEFKS 280
Score = 41.2 bits (95), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D RG G+V+F+ A+A +A M
Sbjct: 329 LYVGNIHFSITETDLQHVFEPFGELEFVQLQKDEN-GRSRGYGFVQFRDAANAREALEKM 387
Query: 171 DGF 173
+GF
Sbjct: 388 NGF 390
>gi|391336770|ref|XP_003742751.1| PREDICTED: RNA-binding protein 39-like [Metaseiulus occidentalis]
Length = 520
Score = 42.7 bits (99), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 92 SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
++R + A++ + LY+ SL +++E L+EIF FG + VEL+ + +G
Sbjct: 252 AERNRQANQTAASTKGPMRLYVGSLHFDISEQMLKEIFEPFGRLDRVELIKED-TGKSKG 310
Query: 152 SGYVRFKTRADAEKAQLYMDGFH 174
G+V F A+KA ++GF
Sbjct: 311 YGFVTFHEADAAKKAMEQLNGFE 333
>gi|365760560|gb|EHN02272.1| Nsr1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 371
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
+++ LS ++++ L++ F + G V+ ++ +R + RG GYV F+ ++ AEKA
Sbjct: 142 TIFVGRLSWSIDDEWLKKEFEHIGGVISARVINERGTDRSRGYGYVDFENKSYAEKAIQE 201
Query: 170 MDG 172
M G
Sbjct: 202 MQG 204
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 44/95 (46%), Gaps = 16/95 (16%)
Query: 72 PQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSN 131
P N + A + G +P+ PS L++ +LS N + + E+F+
Sbjct: 221 PAGNNTNDRAKKFGDTPSEPSD----------------TLFLGNLSFNADRDTIFELFAK 264
Query: 132 FGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
GEVV V + P+G GYV+F + D++KA
Sbjct: 265 HGEVVSVRIPTHPETEQPKGFGYVQFSSLEDSKKA 299
>gi|449016981|dbj|BAM80383.1| polyadenylate-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 999
Score = 42.4 bits (98), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 44/94 (46%), Gaps = 6/94 (6%)
Query: 82 ARRGRSPAPPSKRASSPPRKASTEND--SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVE 139
A G S P S + P AS + ++ LY+ L +V E +L E+FS+ G VV V
Sbjct: 147 ALNGMSSLPASGATAVPAASASGTGELPNVSLYVGDLQPDVVEQNLFELFSSVGPVVSVR 206
Query: 140 LVMDRAVNLPRGSGYVRFKTRADAEKA----QLY 169
+ D G YV F+ DAE+A Q Y
Sbjct: 207 VCRDVVTRRSLGYAYVNFQNPEDAERAIDVLQFY 240
Score = 39.7 bits (91), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L++ +LS +V+E LRE FS FG + + ++ D + +G G+V F +A KA M
Sbjct: 534 LFVKNLSDDVDENRLREEFSRFGTITSLRIMRDEK-GVSKGFGFVAFSHPDEAIKAVTEM 592
Query: 171 D 171
+
Sbjct: 593 N 593
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 96 SSPPRKAS---TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGS 152
+S PR S E D +++ L+ + L+E F G V + ++V DR N +G
Sbjct: 167 NSTPRDTSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGV 226
Query: 153 GYVRFK 158
GYV FK
Sbjct: 227 GYVEFK 232
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D + RG G+V+F+ A +A M
Sbjct: 283 LYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDS-GRSRGYGFVQFRDAGQAREALEKM 341
Query: 171 DGF 173
+GF
Sbjct: 342 NGF 344
>gi|393910287|gb|EFO25730.2| hypothetical protein LOAG_02757 [Loa loa]
Length = 526
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LY+ L ++ E L IF FG++ ++E+ D + + +G YV F+ D ++A
Sbjct: 255 LKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDLS-GVSKGYAYVTFRHADDGKRAME 313
Query: 169 YMDGFH 174
M+GF
Sbjct: 314 QMNGFE 319
>gi|126277401|ref|XP_001369188.1| PREDICTED: probable RNA-binding protein 23 isoform 3 [Monodelphis
domestica]
Length = 415
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 241 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 300
Query: 171 DGFH 174
+GF
Sbjct: 301 NGFE 304
>gi|126277398|ref|XP_001369153.1| PREDICTED: probable RNA-binding protein 23 isoform 2 [Monodelphis
domestica]
Length = 433
Score = 42.4 bits (98), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR IF FG++ ++ L+ D +G G++ F A +A +
Sbjct: 259 LYVGSLHFNITEDMLRGIFEPFGKIDNIVLMKDPDTGRSKGFGFLTFSDSECARRALEQL 318
Query: 171 DGFH 174
+GF
Sbjct: 319 NGFE 322
>gi|395536427|ref|XP_003770219.1| PREDICTED: transformer-2 protein homolog beta-like [Sarcophilus
harrisii]
Length = 288
Score = 42.4 bits (98), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E LRE+FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 117 NCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK 176
Query: 168 LYMDG 172
+G
Sbjct: 177 ERANG 181
>gi|402588492|gb|EJW82425.1| splicing factor, partial [Wuchereria bancrofti]
Length = 471
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LY+ L ++ E L IF FG++ ++E+ D + + +G YV F+ D ++A
Sbjct: 200 LKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDLS-GVSKGYAYVTFRHADDGKRAME 258
Query: 169 YMDGFH 174
M+GF
Sbjct: 259 QMNGFE 264
>gi|115497272|ref|NP_001069104.1| probable RNA-binding protein 23 [Bos taurus]
gi|113911797|gb|AAI22594.1| RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 42.4 bits (98), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR I FG++ ++ L+ D +G G++ F A +A +
Sbjct: 280 LYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQL 339
Query: 171 DGFH 174
+GF
Sbjct: 340 NGFE 343
>gi|296483628|tpg|DAA25743.1| TPA: RNA binding motif protein 23 [Bos taurus]
Length = 463
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR I FG++ ++ L+ D +G G++ F A +A +
Sbjct: 280 LYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQL 339
Query: 171 DGFH 174
+GF
Sbjct: 340 NGFE 343
>gi|339240185|ref|XP_003376018.1| splicing factor, arginine/serine-rich 10 [Trichinella spiralis]
gi|316975289|gb|EFV58737.1| splicing factor, arginine/serine-rich 10 [Trichinella spiralis]
Length = 448
Score = 42.4 bits (98), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 3/84 (3%)
Query: 84 RGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ RSP KR +P T S L + LS E L ++FS +G+V DV+LV D
Sbjct: 145 KSRSPMSNRKRHLAPRENPPT---SRCLGVFGLSLYTTERDLHQLFSRYGKVDDVQLVYD 201
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQ 167
RG G+V F T DA A+
Sbjct: 202 HPSGRSRGFGFVYFDTVDDAVLAR 225
>gi|388855334|emb|CCF50998.1| related to NSR1-nuclear localization sequence binding protein
[Ustilago hordei]
Length = 452
Score = 42.4 bits (98), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)
Query: 83 RRGRSPAPPSKRASSPPRKAST----ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDV 138
R+ +P SK+A + A+T E ++ +++ LS NV+ L+ FG+V
Sbjct: 149 RKADDESPVSKKAKTEEPAAATTELAEGETNQVWVGQLSWNVDNDWLKSEMEVFGQVTSA 208
Query: 139 ELVMDRAVNLPRGSGYVRF 157
+ +DR RG GYV F
Sbjct: 209 RVQLDRTTGKSRGFGYVDF 227
>gi|343961547|dbj|BAK62363.1| splicing factor, arginine/serine-rich 2 [Pan troglodytes]
Length = 221
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ + LR + +G V D + DR RG +VRF + DAE A M
Sbjct: 16 LKVDNLTYRTSPDTLRRVSEKYGRVGDAYIPRDRYTKESRGFAFVRFHDKRDAEDAMDAM 75
Query: 171 DG 172
DG
Sbjct: 76 DG 77
>gi|297259926|ref|XP_002798213.1| PREDICTED: RNA-binding protein 39-like [Macaca mulatta]
Length = 427
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/89 (25%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 91 PSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA 145
P ++ SP R+ E D+ ++ L+ + L E FS G++ ++L+MD
Sbjct: 130 PFRKDKSPVREPIDNLTPEERDARTVFCMQLAARIRPRDLEEFFSTVGKIESIQLMMDSE 189
Query: 146 VNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
+G G++ F A+KA ++GF
Sbjct: 190 TGRSKGYGFITFSDSECAKKALEQLNGFE 218
>gi|440906315|gb|ELR56591.1| Putative RNA-binding protein 23 [Bos grunniens mutus]
Length = 463
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ SL N+ E LR I FG++ ++ L+ D +G G++ F A +A +
Sbjct: 280 LYVGSLHCNITEDMLRGILEPFGKIDNIVLMKDSETGRSKGYGFITFSDSECARRALEQL 339
Query: 171 DGFH 174
+GF
Sbjct: 340 NGFE 343
>gi|334187200|ref|NP_001190929.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332661168|gb|AEE86568.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 201
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 11/113 (9%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
EN LY+ LS V + L F+ G+V LVM+ + RG +V + DAE
Sbjct: 82 ENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAE 141
Query: 165 KAQLYMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQ-ENPLPVGSHP 216
+ Y++ QS+L+ + R+++ I ++D+ + P SHP
Sbjct: 142 RCIKYLN-----QSVLEGRYITVERKILHQATI-----RDDKIQEKAPENSHP 184
>gi|50305507|ref|XP_452713.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641846|emb|CAH01564.1| KLLA0C11495p [Kluyveromyces lactis]
Length = 445
Score = 42.0 bits (97), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L++ +LS + +L EIF +GE+V V + P+G GYV++ + DA KA
Sbjct: 296 SDTLFLGNLSFEADRDNLYEIFGKYGEIVSVRIPTHPETEQPKGFGYVQYGSIEDATKA 354
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 97 SPPRKASTE--NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGY 154
S +K TE + +++ LS ++++ L+ F G V+ ++ +R + RG GY
Sbjct: 182 SESKKPKTELAGEPATIFVGRLSWSIDDEWLKTEFEPIGGVISARVMYERGTDRSRGYGY 241
Query: 155 VRFKTRADAEKAQLYMDG 172
V F+ ++ AEKA M G
Sbjct: 242 VDFEDKSYAEKAIKEMHG 259
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 42.0 bits (97), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 92 SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
+KR P+ E D +++ L+ + L+E F G V + ++V DR +G
Sbjct: 161 TKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKG 220
Query: 152 SGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQE--NP 209
GYV FK +S+ Q LQ + L + V++ + +++ NP
Sbjct: 221 VGYVEFKNE----------------ESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNP 264
Query: 210 LPVGSHP 216
G HP
Sbjct: 265 EASGPHP 271
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDEN-GRSRGYGFVQFRDAGQAREALEKM 337
Query: 171 DGF 173
+GF
Sbjct: 338 NGF 340
>gi|338716139|ref|XP_003363400.1| PREDICTED: transformer-2 protein homolog beta-like isoform 2 [Equus
caballus]
Length = 254
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E LRE+FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 83 NCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK 142
Query: 168 LYMDG 172
+G
Sbjct: 143 ERANG 147
>gi|312070862|ref|XP_003138342.1| hypothetical protein LOAG_02757 [Loa loa]
Length = 648
Score = 42.0 bits (97), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LY+ L ++ E L IF FG++ ++E+ D + + +G YV F+ D ++A
Sbjct: 377 LKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDLS-GVSKGYAYVTFRHADDGKRAME 435
Query: 169 YMDGFH 174
M+GF
Sbjct: 436 QMNGFE 441
>gi|308483894|ref|XP_003104148.1| CRE-RSP-8 protein [Caenorhabditis remanei]
gi|308258456|gb|EFP02409.1| CRE-RSP-8 protein [Caenorhabditis remanei]
Length = 297
Score = 42.0 bits (97), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + +LS + LR++F FGE+ +LV DR RG G++ FK DA A+
Sbjct: 73 SKCLGVFNLSSYTTDKDLRDVFGEFGEIDKCDLVYDRPSGNSRGFGFIYFKLIEDATAAR 132
>gi|21758154|dbj|BAC05256.1| unnamed protein product [Homo sapiens]
Length = 252
Score = 42.0 bits (97), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E LRE+FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 81 NCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAK 140
Query: 168 LYMDG 172
+G
Sbjct: 141 ERANG 145
>gi|170575391|ref|XP_001893221.1| splicing factor, CC1-like family protein [Brugia malayi]
gi|158600898|gb|EDP37951.1| splicing factor, CC1-like family protein [Brugia malayi]
Length = 640
Score = 42.0 bits (97), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L LY+ L ++ E L IF FG++ ++E+ D + + +G YV F+ D ++A
Sbjct: 369 LKLYVGQLHTSITEDMLGRIFDPFGKIENLEIATDLS-GVSKGYAYVTFRHADDGKRAME 427
Query: 169 YMDGFH 174
M+GF
Sbjct: 428 QMNGFE 433
>gi|392896831|ref|NP_001255142.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
gi|3874499|emb|CAB07322.1| Protein RSP-8, isoform a [Caenorhabditis elegans]
Length = 309
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + +LS E LR++F FGE+ +LV DR RG G++ F DA A+
Sbjct: 75 SKCLGVFNLSSYTTEKDLRDVFGEFGEINKCDLVYDRPSGNSRGFGFIYFNLIEDATAAR 134
Query: 168 -----LYMDGFHRLQSLLQLLQR 185
+DG H+++ L +R
Sbjct: 135 DKLCNTDLDG-HKIRVDFSLTKR 156
>gi|395533366|ref|XP_003768731.1| PREDICTED: serine/arginine-rich splicing factor 2 [Sarcophilus
harrisii]
Length = 224
Score = 42.0 bits (97), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%), Gaps = 3/65 (4%)
Query: 111 LYIDSLSRNVNEGHLREIFSN---FGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
L +D+L+ + LR +F +G V DV + DR RG +VRF + DAE A
Sbjct: 16 LKVDNLTYRTSPDTLRRVFEKDGRYGRVGDVYIPRDRYTKESRGFAFVRFHDKRDAEDAM 75
Query: 168 LYMDG 172
MDG
Sbjct: 76 DAMDG 80
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 41.6 bits (96), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 33/66 (50%), Gaps = 3/66 (4%)
Query: 97 SPPRKAS---TENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
S PR+ S E D +++ L+ + L+E F G V + ++V DR N +G G
Sbjct: 174 STPREPSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVG 233
Query: 154 YVRFKT 159
YV FK
Sbjct: 234 YVEFKN 239
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D + RG G+V+F+ A +A M
Sbjct: 289 LYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDS-GRSRGYGFVQFRDAGQAREALEKM 347
Query: 171 DGF 173
+GF
Sbjct: 348 NGF 350
>gi|403343546|gb|EJY71107.1| RNA binding protein, putative [Oxytricha trifallax]
Length = 388
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 43 RSRSLSRSRS-LSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRK 101
RS S+ +SR S S R T SR RS + K R +KR+ S
Sbjct: 43 RSSSIEKSRKRFSKEQSQERQTMSRERSDRKVQEKDTFREENSSRKYDRGNKRSGSND-- 100
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
++T N LY+ +LS+ V + LR++F +G + +V+D + RG +V +
Sbjct: 101 SATNNQGSSLYVANLSKRVKDSDLRDLFERYGTIQKCTVVVDPITSESRGFAFVVYDNPQ 160
Query: 162 DAEKAQLYMDGFH------RLQSLLQLLQREIV 188
DAE + ++G+ R++ +L RE
Sbjct: 161 DAEDSLSKLNGYDLLGKEIRVEKSKRLKPREAT 193
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 92 SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
+KR P+ E D +++ L+ + L+E F G V + ++V DR +G
Sbjct: 161 TKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRISQRSKG 220
Query: 152 SGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQE--NP 209
GYV FK +S+ Q LQ + L + V++ + +++ NP
Sbjct: 221 VGYVEFKNE----------------ESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNP 264
Query: 210 LPVGSHP 216
G HP
Sbjct: 265 EASGPHP 271
Score = 41.2 bits (95), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDEN-GRSRGYGFVQFRDAGQAREALEKM 337
Query: 171 DGFHRLQSLLQL-LQREIVRELIMSVLILRRMGQNDQENPLPVGSHPPRHGG 221
+GF +++ L + + ++ R GQN Q+NP GS GG
Sbjct: 338 NGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQN-QQNPNFQGSAFSGSGG 388
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 53/127 (41%), Gaps = 18/127 (14%)
Query: 92 SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
+KR P+ E D +++ L+ + L+E F G V + ++V DR +G
Sbjct: 161 TKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKDRISQRSKG 220
Query: 152 SGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQE--NP 209
GYV FK +S+ Q LQ + L + V++ + +++ NP
Sbjct: 221 VGYVEFKNE----------------ESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNP 264
Query: 210 LPVGSHP 216
G HP
Sbjct: 265 EASGPHP 271
Score = 41.2 bits (95), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 55/112 (49%), Gaps = 3/112 (2%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDEN-GRSRGYGFVQFRDAGQAREALEKM 337
Query: 171 DGFHRLQSLLQL-LQREIVRELIMSVLILRRMGQNDQENPLPVGSHPPRHGG 221
+GF +++ L + + ++ R GQN Q+NP GS GG
Sbjct: 338 NGFDLAGRPIRVGLGNDKFTPESTANMLQRFSGQN-QQNPNFQGSAFSGSGG 388
>gi|663262|emb|CAA88179.1| gar2 [Schizosaccharomyces pombe]
Length = 500
Score = 41.6 bits (96), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
N++ +++ LS NV++ L + F +G +V ++MD +G GYV F+T
Sbjct: 260 NETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFET 313
>gi|258578315|ref|XP_002543339.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
gi|237903605|gb|EEP78006.1| hypothetical protein UREG_02855 [Uncinocarpus reesii 1704]
Length = 582
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 33/73 (45%)
Query: 87 SPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAV 146
SP+P + + P+ E D +++ L+ + L F G V D ++V DR
Sbjct: 173 SPSPKPRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVS 232
Query: 147 NLPRGSGYVRFKT 159
+G GYV FK
Sbjct: 233 GRSKGVGYVEFKN 245
>gi|170591200|ref|XP_001900358.1| transformer-2a3 [Brugia malayi]
gi|158591970|gb|EDP30572.1| transformer-2a3, putative [Brugia malayi]
Length = 453
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E L+E+FS +G++ +V+LV D RG G+V FK DA +A+
Sbjct: 280 SRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIEAK 339
>gi|19114443|ref|NP_593531.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe 972h-]
gi|6226864|sp|P41891.2|GAR2_SCHPO RecName: Full=Protein gar2
gi|7523472|emb|CAB86413.1| nucleolar protein required for rRNA processing [Schizosaccharomyces
pombe]
Length = 500
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 31/54 (57%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
N++ +++ LS NV++ L + F +G +V ++MD +G GYV F+T
Sbjct: 260 NETCTVFVGRLSWNVDDQWLGQEFEEYGTIVGARVIMDGQSGRSKGYGYVDFET 313
>gi|393909855|gb|EFO22008.2| transformer-2b6 [Loa loa]
Length = 469
Score = 41.6 bits (96), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E L+E+FS +G++ +V+LV D RG G+V FK DA +A+
Sbjct: 295 SRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIEAK 354
>gi|393909854|gb|EJD75619.1| transformer-2b6, variant [Loa loa]
Length = 442
Score = 41.6 bits (96), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E L+E+FS +G++ +V+LV D RG G+V FK DA +A+
Sbjct: 268 SRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIEAK 327
>gi|226510383|ref|NP_001140384.1| hypothetical protein [Zea mays]
gi|194699256|gb|ACF83712.1| unknown [Zea mays]
gi|413925181|gb|AFW65113.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878214|gb|AGE46070.1| arginine/serine-rich splicing factor SC30 transcript IX [Zea mays]
Length = 274
Score = 41.6 bits (96), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|430811054|emb|CCJ31450.1| unnamed protein product, partial [Pneumocystis jirovecii]
Length = 484
Score = 41.6 bits (96), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 73 QRNKSPAVAARRGRSPA-----PPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLRE 127
+R++ + RR RSP PP + S P+ E D +++ L+ + L
Sbjct: 73 ERDEYDSKKHRRSRSPVTRESRPPVREES--PKLTEDERDRRTVFVQQLAARLRTRELIA 130
Query: 128 IFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
F G V D ++V DR +G GYV F+ KA
Sbjct: 131 FFEKVGPVRDAQVVKDRVSGRSKGVGYVEFRDEESVHKA 169
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFK 158
P E D +++ L+ + L+E F G V + ++V DR N +G GYV FK
Sbjct: 184 PSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFK 243
Query: 159 T 159
Sbjct: 244 N 244
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D + RG G+V+F+ + A +A M
Sbjct: 294 LYVGNIHFSITETDLQNVFEPFGELEFVQLQKDDS-GRSRGYGFVQFRDASQAREALEKM 352
Query: 171 DGF 173
+GF
Sbjct: 353 NGF 355
>gi|405976035|gb|EKC40559.1| RNA-binding protein with serine-rich domain 1 [Crassostrea gigas]
Length = 248
Score = 41.6 bits (96), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Query: 81 AARRGRSPAPPSKRASSPP--RKASTENDSLVLYIDSLSRNVNEGHLREIFSNFG 133
A+ +GR ++ S P RK S E +++ L+RNVN+ H+ EIFSN+G
Sbjct: 79 ASEKGRGGKASKRQQSDSPKRRKKSPEPKPTKVHVGKLTRNVNKDHIMEIFSNYG 133
>gi|402595074|gb|EJW89000.1| splicing factor [Wuchereria bancrofti]
Length = 272
Score = 41.6 bits (96), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E L+E+FS +G++ +V+LV D RG G+V FK DA +A+
Sbjct: 98 SRCLGVFGLSLYTTERDLKELFSQYGDLDNVQLVFDHPTGRSRGFGFVYFKKIEDAIEAK 157
>gi|395545949|ref|XP_003774858.1| PREDICTED: uncharacterized protein LOC100927808 [Sarcophilus
harrisii]
Length = 442
Score = 41.2 bits (95), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
L + LS E LR+IF+ +G + V +V D+ RG +V F+ +A+KA+
Sbjct: 290 CCLGVFGLSLYTTERDLRQIFTKYGPISHVSIVYDQQSRRSRGFAFVYFENVEEAKKAKE 349
Query: 169 YMDGF 173
+DG
Sbjct: 350 RVDGI 354
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 41.2 bits (95), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 32/65 (49%)
Query: 93 KRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGS 152
K+ + +A E D ++ +S E + E FS G+V DV L+MDR +G
Sbjct: 162 KKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNSRRSKGV 221
Query: 153 GYVRF 157
GYV F
Sbjct: 222 GYVEF 226
Score = 37.7 bits (86), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
LY+ +L N+ E +LR++F FG V V++ +D + + +G G+++F DA A
Sbjct: 283 LYVGNLHPNITEDNLRQVFGAFGTVELVQMPVDESGHC-KGFGFIQFTRLEDARNA 337
>gi|448123237|ref|XP_004204643.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|448125519|ref|XP_004205201.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358249834|emb|CCE72900.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
gi|358350182|emb|CCE73461.1| Piso0_000503 [Millerozyma farinosa CBS 7064]
Length = 505
Score = 41.2 bits (95), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS N +L +IF +G VV + P+G GY+ F T +A+ A
Sbjct: 392 SSTLFIGNLSFNAQRDNLYDIFGEYGRVVSCRMPTHPDTQQPKGFGYIEFSTVDEAKAAL 451
Query: 168 LYMDG 172
++G
Sbjct: 452 EALNG 456
Score = 41.2 bits (95), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 100 RKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
R + + L++ LS N+++ L+ F G V ++ ++A RG GYV F+T
Sbjct: 282 RTKKQDEEPATLFVGRLSWNIDDEWLQREFEPLGGVTGARVIYEKASGKSRGYGYVDFET 341
Query: 160 RADAEKA 166
++ A+ A
Sbjct: 342 KSQAQHA 348
>gi|448878206|gb|AGE46066.1| arginine/serine-rich splicing factor SC30 transcript V [Zea mays]
Length = 262
Score = 41.2 bits (95), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|22022313|dbj|BAC06513.1| transformer-2a [Oryzias latipes]
gi|49204529|dbj|BAD24699.1| transformer-2a3 [Oryzias latipes]
Length = 283
Score = 41.2 bits (95), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E LRE+FS +G + +V +V D+ RG +V F+ D+++A+
Sbjct: 114 SCCLGVFGLSLYTTERDLREVFSKYGPLSEVNIVYDQQSRRSRGFAFVYFENSEDSKEAK 173
Query: 168 LYMDG 172
+G
Sbjct: 174 EQANG 178
>gi|413925182|gb|AFW65114.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
Length = 268
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|448878208|gb|AGE46067.1| arginine/serine-rich splicing factor SC30 transcript VI [Zea mays]
Length = 270
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|238006960|gb|ACR34515.1| unknown [Zea mays]
gi|413925185|gb|AFW65117.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|413925186|gb|AFW65118.1| hypothetical protein ZEAMMB73_855473 [Zea mays]
gi|448878198|gb|AGE46062.1| arginine/serine-rich splicing factor SC30 transcript I [Zea mays]
gi|448878204|gb|AGE46065.1| arginine/serine-rich splicing factor SC30 transcript IV [Zea mays]
Length = 264
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|71024221|ref|XP_762340.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
gi|46101864|gb|EAK87097.1| hypothetical protein UM06193.1 [Ustilago maydis 521]
Length = 475
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 33/65 (50%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS +V+E + FS GEV V L D P+G GYV F + A+ A
Sbjct: 311 SSTLFIGNLSFDVSEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 370
Query: 168 LYMDG 172
M G
Sbjct: 371 DAMTG 375
>gi|448878200|gb|AGE46063.1| arginine/serine-rich splicing factor SC30 transcript II [Zea mays]
Length = 254
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|224032171|gb|ACN35161.1| unknown [Zea mays]
gi|413925183|gb|AFW65115.1| splicing factor, arginine/serine-rich 2 isoform 1 [Zea mays]
gi|413925184|gb|AFW65116.1| splicing factor, arginine/serine-rich 2 isoform 2 [Zea mays]
gi|448878210|gb|AGE46068.1| arginine/serine-rich splicing factor SC30 transcript VII [Zea mays]
Length = 256
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|350408062|ref|XP_003488289.1| PREDICTED: hypothetical protein LOC100745820 [Bombus impatiens]
Length = 326
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 84/214 (39%), Gaps = 69/214 (32%)
Query: 47 LSRSRSLSSSSS-------------------------------PSRSTNSRSRSPPPQ-- 73
RSRS S +S +S+NS P P+
Sbjct: 87 RKRSRSKSVDASRRHDNKEKEREKERERERDRDRDRDRDREKDKKKSSNSVIDKPKPKGR 146
Query: 74 RNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNF 132
RR RSP P P+K ++I L+RNV + H+ EIFS +
Sbjct: 147 SRSPSPRRKRRERSPIPRPTK-----------------IHIGHLTRNVTKEHIMEIFSTY 189
Query: 133 GEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVREL 191
G++ V+ MD+ N RG YV F+T +AE A +MDG Q+ +EI
Sbjct: 190 GQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENAMKHMDGG-------QIDGQEITAAP 242
Query: 192 IM----SVLILRRMGQNDQENPLPVGSHPPRHGG 221
++ L +RRM +PL PPR GG
Sbjct: 243 VLLPKPRPLPMRRM------SPLMGRRAPPRWGG 270
>gi|110761026|ref|XP_624099.2| PREDICTED: hypothetical protein LOC551707 [Apis mellifera]
gi|380015571|ref|XP_003691773.1| PREDICTED: uncharacterized protein LOC100871217 [Apis florea]
Length = 326
Score = 40.8 bits (94), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 60/214 (28%), Positives = 84/214 (39%), Gaps = 69/214 (32%)
Query: 47 LSRSRSLSSSSS-------------------------------PSRSTNSRSRSPPPQ-- 73
RSRS S +S +S+NS P P+
Sbjct: 87 RKRSRSKSVDASRRHDNKEKEREKERERERDRDRDRDRDREKDKKKSSNSVIDKPKPKGR 146
Query: 74 RNKSPAVAARRGRSPAP-PSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNF 132
RR RSP P P+K ++I L+RNV + H+ EIFS +
Sbjct: 147 SRSPSPRRKRRERSPIPRPTK-----------------IHIGHLTRNVTKEHIMEIFSTY 189
Query: 133 GEVVDVELVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVREL 191
G++ V+ MD+ N RG YV F+T +AE A +MDG Q+ +EI
Sbjct: 190 GQIKMVDFAMDKLHPNQGRGFAYVEFETADEAENAMKHMDGG-------QIDGQEITAAP 242
Query: 192 IM----SVLILRRMGQNDQENPLPVGSHPPRHGG 221
++ L +RRM +PL PPR GG
Sbjct: 243 VLLPKPRPLPMRRM------SPLMGRRAPPRWGG 270
>gi|448878212|gb|AGE46069.1| arginine/serine-rich splicing factor SC30 transcript VIII [Zea
mays]
Length = 261
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|389647175|ref|XP_003721219.1| hypothetical protein MGG_02580 [Magnaporthe oryzae 70-15]
gi|351638611|gb|EHA46476.1| hypothetical protein MGG_02580 [Magnaporthe oryzae 70-15]
Length = 331
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 85/160 (53%), Gaps = 32/160 (20%)
Query: 12 PSRSASGSSSRS-RSRSYSGSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSP 70
PS S S S R+ RSR G+DS S SR+RS +R+RS S+ SPSR + R RS
Sbjct: 31 PSHSRSPSPRRNGRSR---GADS-RSRSRSRSRTRSRTRTRSPSAGRSPSRGRDVRMRS- 85
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS 130
++ +V+A SPAP S + + I+ L++NV E HLR+IF
Sbjct: 86 -----RTKSVSA----SPAPRSTK----------------IVIERLTKNVTEDHLRDIFG 120
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
+GE+ D++L ++R RG+ Y+ + DAE A +M
Sbjct: 121 QYGEIRDLDLPINRQ-GTNRGTAYILYVQEPDAESAIAHM 159
>gi|326508420|dbj|BAJ99477.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508838|dbj|BAJ86812.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533188|dbj|BAJ93566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 247
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 52/120 (43%), Gaps = 2/120 (1%)
Query: 51 RSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLV 110
R++SSS P+R T SRS PPP+R +R S+ S K N
Sbjct: 52 RTISSSPPPTRRTVSRS--PPPKRRARSRSRSRSRSRNRNRSRSRSRSRDKDQVRNPGNN 109
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS E L + FS G+V D +V D RG +V + DA + Y+
Sbjct: 110 LYVTGLSIRTQETDLEKFFSKEGKVKDCRVVTDPRTKESRGFAFVTMENVEDARRCIKYL 169
>gi|298708752|emb|CBJ30714.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 270
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGFH 174
++ IF++FG+V DV L +D PRG +V F DA A+ +DG++
Sbjct: 49 VKRIFTDFGDVRDVYLPLDFGTQKPRGFAFVEFYDPGDAAHARDRLDGYN 98
>gi|195393106|ref|XP_002055195.1| GJ19235 [Drosophila virilis]
gi|194149705|gb|EDW65396.1| GJ19235 [Drosophila virilis]
Length = 583
Score = 40.8 bits (94), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 5/70 (7%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAV-----NLPRGSGYVRFKTRAD 162
++ L+I L+R V + H+ EIF +FG + +V+ +D RG +V + D
Sbjct: 478 TVRLHIKGLTRQVTKSHIVEIFGSFGPLTNVDFPIDHFYRGGYSRAGRGFAFVEYANPED 537
Query: 163 AEKAQLYMDG 172
E A MDG
Sbjct: 538 CECALKNMDG 547
>gi|195657783|gb|ACG48359.1| splicing factor, arginine/serine-rich 2 [Zea mays]
Length = 254
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|444318191|ref|XP_004179753.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
gi|387512794|emb|CCH60234.1| hypothetical protein TBLA_0C04360 [Tetrapisispora blattae CBS 6284]
Length = 403
Score = 40.8 bits (94), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 39/78 (50%)
Query: 95 ASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGY 154
+ S +K + +++ LS ++++ L+ F G V+ ++ ++ + RG GY
Sbjct: 147 SESKKQKPDESEEPATIFVGRLSWSIDDEWLKTEFEPIGGVLSARVIYEKGTDRSRGYGY 206
Query: 155 VRFKTRADAEKAQLYMDG 172
V FK + AEKA M G
Sbjct: 207 VDFKNKTFAEKAIKEMQG 224
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 36/67 (53%), Gaps = 3/67 (4%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L++ +LS + + ++ E+FS +GE++ V + P+G GYV++ D E A+
Sbjct: 260 SETLFLGNLSFDADRDNIYEVFSKYGEIISVRIPTHPETEQPKGFGYVQY---GDVESAK 316
Query: 168 LYMDGFH 174
+D
Sbjct: 317 KALDALQ 323
>gi|351725637|ref|NP_001238379.1| uncharacterized protein LOC100499944 [Glycine max]
gi|255627903|gb|ACU14296.1| unknown [Glycine max]
Length = 164
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
LY+ LS V E L E FS G+V LV++ + RG +V ++ DAE+ Y
Sbjct: 72 TLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAEDAERCIKY 131
Query: 170 MDGFHRLQSLLQ 181
++ QS+L+
Sbjct: 132 LN-----QSVLE 138
>gi|326437755|gb|EGD83325.1| hypothetical protein PTSG_12099 [Salpingoeca sp. ATCC 50818]
Length = 741
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 71 PPQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS 130
PP+R SP + R R RA+ R+ S VL + L +E L E F
Sbjct: 615 PPRRRFSPEGSRFRPR-------RATQ--RQRENPEPSCVLGVFGLHDRTDEHALEECFG 665
Query: 131 NFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
FG++ V +V DR R G++ FK + DA+ A+ ++G
Sbjct: 666 EFGDLDRVIIVRDRKTGESRRFGFITFKRQDDADAARDKLNG 707
>gi|240256170|ref|NP_680768.5| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
gi|332661165|gb|AEE86565.1| RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis
thaliana]
Length = 238
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
EN LY+ LS V + L F+ G+V LVM+ + RG +V + DAE
Sbjct: 67 ENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMSSLKDAE 126
Query: 165 KAQLYMDGFHRLQSLLQ 181
+ Y++ QS+L+
Sbjct: 127 RCIKYLN-----QSVLE 138
>gi|343427935|emb|CBQ71460.1| related to NSR1-nuclear localization sequence binding protein
[Sporisorium reilianum SRZ2]
Length = 459
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS +++E + FS GEV V L D P+G GYV F + A+ A
Sbjct: 305 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAL 364
Query: 168 LYMDG 172
M G
Sbjct: 365 DAMTG 369
Score = 37.7 bits (86), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
+++ LS NV+ L+ FGEV + +DR RG GYV F
Sbjct: 209 VWVGQLSWNVDNDWLKSEMEVFGEVTSARVQLDRTTGKSRGFGYVDF 255
>gi|403222792|dbj|BAM40923.1| RNA splicing factor [Theileria orientalis strain Shintoku]
Length = 649
Score = 40.4 bits (93), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 119 NVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
N++EG L+++F+ FG V +V V + L +G YVRFK +A +A M+GF
Sbjct: 440 NLSEGDLQQLFAPFGNVAEV-AVARNDLGLSKGYAYVRFKRWTEAREALNVMNGF 493
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDEN-GRSRGYGFVQFRDAGQAREALEKM 337
Query: 171 DGF 173
+GF
Sbjct: 338 NGF 340
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 54/135 (40%), Gaps = 18/135 (13%)
Query: 84 RGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
RGR + P+ E D +++ L+ + L+E F G V + ++V D
Sbjct: 153 RGRDDDRREPKRDGTPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKD 212
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQLLQREIVRELIMSVLILRRMGQ 203
R +G GYV FK +S+ Q LQ + L + V++ +
Sbjct: 213 RISQRSKGVGYVEFKNE----------------ESVTQALQLTGQKLLGIPVIVQVTEAE 256
Query: 204 NDQE--NPLPVGSHP 216
+++ NP G HP
Sbjct: 257 KNRQARNPEASGPHP 271
>gi|448878320|gb|AGE46123.1| arginine/serine-rich splicing factor SC31 transcript I [Sorghum
bicolor]
Length = 268
Score = 40.4 bits (93), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|443899731|dbj|GAC77060.1| nuclear localization sequence binding protein, partial [Pseudozyma
antarctica T-34]
Length = 400
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 33/65 (50%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L+I +LS +++E + FS GEV V L D P+G GYV F + A+ A
Sbjct: 301 SSTLFIGNLSFDISEDDVWNAFSEHGEVSGVRLPKDPDSGRPKGFGYVEFAAQESAQAAI 360
Query: 168 LYMDG 172
M G
Sbjct: 361 DAMTG 365
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
E ++ +++ LS NV+ L+ FGEV + +DR RG GYV F
Sbjct: 199 EGETNQIWVGQLSWNVDNEWLKSEMEAFGEVTSARVQLDRTTGKSRGFGYVDF 251
>gi|21739702|emb|CAD38887.1| hypothetical protein [Homo sapiens]
gi|119586632|gb|EAW66228.1| RNA binding motif protein 23, isoform CRA_g [Homo sapiens]
Length = 319
Score = 40.4 bits (93), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 54/133 (40%), Gaps = 18/133 (13%)
Query: 30 GSDSRSSSRSLSSRSRSLSRSRSLSSSSSPSRSTNSRSRSPPPQRNKSPAVAARRGRSPA 89
G R SRS R S SRSR R RSPP A R G S +
Sbjct: 95 GRQCRHRSRSWDRRHGSESRSRDHR------REDRVHYRSPPL------ATGYRYGHSKS 142
Query: 90 PPSKRASSPPRK-----ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR 144
P R SP R+ + E D+ ++ L+ + L + FS G+V DV ++ DR
Sbjct: 143 P-HFREKSPVREPVDNLSPEERDARTVFCMQLAARIRPRDLEDFFSAVGKVRDVRIISDR 201
Query: 145 AVNLPRGSGYVRF 157
+G YV F
Sbjct: 202 NSRRSKGIAYVEF 214
>gi|115476996|ref|NP_001062094.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|42408182|dbj|BAD09319.1| putative splicing factor, arginine/serine-rich [Oryza sativa
Japonica Group]
gi|113624063|dbj|BAF24008.1| Os08g0486200 [Oryza sativa Japonica Group]
gi|215693774|dbj|BAG88973.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737273|dbj|BAG96202.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 289
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFDRYGKVVDVFIPRDRRTGDSRGFAFVRYKYAEEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 40.4 bits (93), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 88 PAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN 147
P SKR ++P + E D +++ L+ + L+ F G V + ++V DR
Sbjct: 160 PETSSKREATP-QLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQ 218
Query: 148 LPRGSGYVRFKTRADAEKA-QLYMDGFHRLQSLLQLLQREIVREL 191
+G GYV FK +A QL + ++Q+ + E R++
Sbjct: 219 RSKGVGYVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQV 263
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+++ + A +A M
Sbjct: 281 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDN-GRSRGYGFVQYREASQAREALEKM 339
Query: 171 DGF 173
+GF
Sbjct: 340 NGF 342
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P AS +S+ LY+ ++ ++ E L+++F FGE+ V+L +
Sbjct: 263 TEAEKNRQARNPEANASGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE 322
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
RG G+V+F+ A +A M+GF
Sbjct: 323 EG-GRSRGYGFVQFRDPNQAREALEKMNGF 351
>gi|297847164|ref|XP_002891463.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
gi|297337305|gb|EFH67722.1| hypothetical protein ARALYDRAFT_474037 [Arabidopsis lyrata subsp.
lyrata]
Length = 550
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L+ +LS N+ + F GEVVDV +R RG G+V F + +A+KA
Sbjct: 293 SKTLFAANLSFNIERSDVENFFKEVGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKA 351
>gi|448878326|gb|AGE46126.1| arginine/serine-rich splicing factor SC31 transcript IV [Sorghum
bicolor]
Length = 273
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F +G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLYPLFERYGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 88 PAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVN 147
P SKR ++P + E D +++ L+ + L+ F G V + ++V DR
Sbjct: 160 PEASSKREATP-QLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQ 218
Query: 148 LPRGSGYVRFKTRADAEKA-QLYMDGFHRLQSLLQLLQREIVREL 191
+G GYV FK +A QL + ++Q+ + E R++
Sbjct: 219 RSKGVGYVEFKNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQV 263
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+++ + A +A M
Sbjct: 281 LYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDN-GRSRGYGFVQYREASQAREALEKM 339
Query: 171 DGF 173
+GF
Sbjct: 340 NGF 342
>gi|255636876|gb|ACU18771.1| unknown [Glycine max]
Length = 246
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 37/77 (48%), Gaps = 5/77 (6%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
+N LY+ LS V E L E FS G+V LV++ + RG ++ T DA
Sbjct: 65 KNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTVEDAN 124
Query: 165 KAQLYMDGFHRLQSLLQ 181
+ Y++ QS+L+
Sbjct: 125 RCIKYLN-----QSVLE 136
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 40.0 bits (92), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 46/99 (46%), Gaps = 1/99 (1%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSG 153
R +S P E D +++ L+ + L++ F G V + ++V DR N +G G
Sbjct: 194 RDTSMPPLTEDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVG 253
Query: 154 YVRFKTRADAEKA-QLYMDGFHRLQSLLQLLQREIVREL 191
YV F++ A QL + ++Q+ + E R++
Sbjct: 254 YVEFRSEESVTAALQLTGQKLLGIPVIVQMTEAEKNRQV 292
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 45/91 (49%), Gaps = 5/91 (5%)
Query: 87 SPAPPSKRASSPPRKASTENDSLV----LYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
+ A +++ S S N + V LY+ ++ ++ E LR +F FGE+ V+L
Sbjct: 284 TEAEKNRQVRSTAEATSNGNSTGVPFHRLYVGNIHFSITESDLRNVFEPFGELEFVQLQK 343
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D RG G+V+F+ A +A M+GF
Sbjct: 344 DD-TGRSRGYGFVQFRDSDQAREALEKMNGF 373
>gi|351726252|ref|NP_001237888.1| uncharacterized protein LOC100500170 [Glycine max]
gi|255629542|gb|ACU15118.1| unknown [Glycine max]
Length = 238
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%), Gaps = 5/76 (6%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
N LY+ LS V E L E FS G+V LV++ + RG +V ++ DAE+
Sbjct: 68 NPGDTLYVTGLSSRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMESAEDAER 127
Query: 166 AQLYMDGFHRLQSLLQ 181
Y++ QS+L+
Sbjct: 128 CIKYLN-----QSVLE 138
>gi|198424500|ref|XP_002131886.1| PREDICTED: similar to Transformer-2 protein homolog (TRA-2 alpha)
[Ciona intestinalis]
Length = 283
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 44/99 (44%), Gaps = 17/99 (17%)
Query: 76 KSPAVAARR--GRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFG 133
KSP +R G PPS + L + LS N+ LR +FS +G
Sbjct: 89 KSPMSGRKRHIGDRLNPPSGK---------------CLGVFGLSLYTNDSDLRSVFSRYG 133
Query: 134 EVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+ D+ +V+D+ RG G+V F DA +A+ +G
Sbjct: 134 RITDINVVIDQKTGRSRGFGFVYFDNDDDAAEAKERANG 172
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 279 LYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDN-GRSRGYGFVQFRDATQAREALEKM 337
Query: 171 DGF 173
+GF
Sbjct: 338 NGF 340
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Query: 94 RASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFS-NFGEVVDVELVMDRAVNLPRGS 152
R S P+ E DS +++ L+ + L+ F N G V + ++V DR +G
Sbjct: 162 RRSRSPQLNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV 221
Query: 153 GYVRFKTRADAEKA 166
GYV FK +KA
Sbjct: 222 GYVEFKDEETVQKA 235
>gi|313228431|emb|CBY23582.1| unnamed protein product [Oikopleura dioica]
Length = 227
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 81 AARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVEL 140
AR+ RS +P R + N S L I +L R +E + F +G++ +L
Sbjct: 49 GARKSRSVSPTKFRKQRHFGDRADPNKSRCLGIFNLGRKTSEDEFKRTFERYGKMESCKL 108
Query: 141 VMDRAVNLPRGSGYVRFKTRADA 163
V D+ RG G+V ++ DA
Sbjct: 109 VYDQKREESRGFGFVTYENIEDA 131
>gi|15222009|ref|NP_175322.1| nucleolin [Arabidopsis thaliana]
gi|75334377|sp|Q9FVQ1.1|NUCL1_ARATH RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1;
Short=AtNUC-L1; AltName: Full=Protein PARALLEL 1;
Short=AtPARL1
gi|11094815|gb|AAG29744.1|AC084414_12 nuM1 protein, putative [Arabidopsis thaliana]
gi|28973759|gb|AAO64195.1| putative nucleolin [Arabidopsis thaliana]
gi|332194246|gb|AEE32367.1| nucleolin [Arabidopsis thaliana]
Length = 557
Score = 40.0 bits (92), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 30/59 (50%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
S L+ +LS N+ + F GEVVDV +R RG G+V F + +A+KA
Sbjct: 296 SKTLFAANLSFNIERADVENFFKEAGEVVDVRFSTNRDDGSFRGFGHVEFASSEEAQKA 354
>gi|357483947|ref|XP_003612260.1| Scaffold attachment factor B1 [Medicago truncatula]
gi|355513595|gb|AES95218.1| Scaffold attachment factor B1 [Medicago truncatula]
Length = 303
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLY 169
LY+ LS V E L E FS G+V LV++ + RG +V T DA + Y
Sbjct: 132 TLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDTAEDANRCIKY 191
Query: 170 MDGFHRLQSLLQ 181
++ QS+L+
Sbjct: 192 LN-----QSILE 198
>gi|313241451|emb|CBY33705.1| unnamed protein product [Oikopleura dioica]
Length = 227
Score = 40.0 bits (92), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 38/83 (45%)
Query: 81 AARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVEL 140
AR+ RS +P R + N S L I +L R +E + F +G++ +L
Sbjct: 49 GARKSRSVSPTKFRKQRHFGDRADPNKSRCLGIFNLGRKTSEDEFKRTFERYGKMESCKL 108
Query: 141 VMDRAVNLPRGSGYVRFKTRADA 163
V D+ RG G+V ++ DA
Sbjct: 109 VYDQKREESRGFGFVTYENIEDA 131
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 40.0 bits (92), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ NV E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 275 LYVGNIHFNVTEQDLQAVFEPFGELEYVQLQKDDN-GRSRGYGFVQFRDATQAREALEKM 333
Query: 171 DGF 173
+GF
Sbjct: 334 NGF 336
>gi|340914665|gb|EGS18006.1| hypothetical protein CTHT_0060190 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 539
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 35/73 (47%)
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRA 161
A T + L++ +L V++ L E F N +V +V D+ RG GYV F +
Sbjct: 298 AQTSEKTATLWVGNLGWAVDDKALYEEFENCEGIVSARVVTDKDSRRSRGFGYVDFTSPD 357
Query: 162 DAEKAQLYMDGFH 174
AEKA +G H
Sbjct: 358 AAEKAYNEKNGAH 370
>gi|41055184|ref|NP_957491.1| transformer-2 protein homolog beta [Danio rerio]
gi|29124601|gb|AAH49051.1| Splicing factor, arginine/serine-rich, 10 [Danio rerio]
Length = 278
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E LRE+FS +G + DV +V D+ RG V F+ R D+++A+
Sbjct: 122 NCCLGVFGLSLYTTERDLREVFSKYGPLSDVCIVYDQQSRRSRGFALVYFENREDSKEAK 181
Query: 168 LYMDG 172
+G
Sbjct: 182 ERANG 186
>gi|268570471|ref|XP_002640752.1| C. briggsae CBR-RNP-5 protein [Caenorhabditis briggsae]
Length = 295
Score = 39.7 bits (91), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 58/142 (40%), Gaps = 44/142 (30%)
Query: 84 RGRSPAPPSKRAS------------------SPPRK------------------------ 101
R SP P RA SPPR+
Sbjct: 70 RRGSP-PRGARADRGGGRPSPSPPRRRHITPSPPRRGGRDRSGSRQRRRSPPARRSSPMP 128
Query: 102 ASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRA-VNLPRGSGYVRFKTR 160
A + + + I +LS+NV H+ EIFS +G + V+L DR ++ RG GYV ++
Sbjct: 129 ARSSSPIKRIIIKNLSKNVIREHVEEIFSIYGAIAKVDLPPDRNHTHIHRGYGYVDYQNV 188
Query: 161 ADAEKAQLYMDGFHRLQSLLQL 182
DAEK+ YMDG ++Q+
Sbjct: 189 EDAEKSIKYMDGGQVDGQIIQV 210
>gi|242773880|ref|XP_002478329.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
gi|218721948|gb|EED21366.1| RNA splicing factor (Pad-1), putative [Talaromyces stipitatus ATCC
10500]
Length = 562
Score = 39.7 bits (91), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 77 SPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVV 136
+ A R+ R+P S +++S P LY+ ++ ++ E ++ +F FGE+
Sbjct: 244 TEAEKNRQARNPEASSGQSASAPFHR--------LYVGNIHFSITENDIQNVFEPFGELE 295
Query: 137 DVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
V+L D RG G+V+F+ A +A M+GF
Sbjct: 296 FVQLQKDE-TGRSRGYGFVQFRDPNQAREALEKMNGF 331
>gi|57118282|gb|AAW34233.1| transformer 2 [Musca domestica]
Length = 232
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 33/58 (56%)
Query: 110 VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
L + LS + + +REIFS +G + +++V+D RG ++ +K ADAE A+
Sbjct: 98 CLGVFGLSVHTTQQQIREIFSKYGPIERIQVVVDAQTGRSRGFCFIYYKHLADAEVAR 155
>gi|407918973|gb|EKG12232.1| hypothetical protein MPH_10639 [Macrophomina phaseolina MS6]
Length = 602
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 33/68 (48%), Gaps = 1/68 (1%)
Query: 92 SKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
+KR+SSPP E D +++ L+ + L F G V + ++V DR +G
Sbjct: 194 AKRSSSPPL-TEDERDRRTVFVQQLAARLRTKDLIAFFEKVGPVKEAQIVKDRVSGRSKG 252
Query: 152 SGYVRFKT 159
GYV FK
Sbjct: 253 VGYVEFKN 260
Score = 38.9 bits (89), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L + RG G+V+F+ A A++A M
Sbjct: 311 LYVGNIHFSITESDLQNVFEPFGELEFVQLQKEEG-GRSRGYGFVQFRDPAQAKEALEKM 369
Query: 171 DGF 173
+GF
Sbjct: 370 NGF 372
>gi|256079281|ref|XP_002575917.1| transformer-2-related [Schistosoma mansoni]
gi|360044867|emb|CCD82415.1| transformer-2-related [Schistosoma mansoni]
Length = 175
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|226474562|emb|CAX77528.1| putative transformer-2 protein [Schistosoma japonicum]
Length = 170
Score = 39.3 bits (90), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|56755992|gb|AAW26174.1| unknown [Schistosoma japonicum]
gi|226474196|emb|CAX71584.1| Splicing factor, arginine/serine-rich 10 [Schistosoma japonicum]
gi|226474198|emb|CAX71585.1| Splicing factor, arginine/serine-rich 10 [Schistosoma japonicum]
gi|226474564|emb|CAX77529.1| putative transformer-2 protein [Schistosoma japonicum]
Length = 199
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|256079283|ref|XP_002575918.1| transformer-2-related [Schistosoma mansoni]
gi|360044868|emb|CCD82416.1| transformer-2-related [Schistosoma mansoni]
Length = 199
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|239912260|gb|ACS34688.1| transformer 2 [Lucilia cuprina]
Length = 271
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 125 LREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
+REIFS FG + +++V+D RGS ++ ++ ADA+ A
Sbjct: 137 IREIFSKFGPIERIQVVIDAQTGRSRGSCFIYYENLADAKAA 178
>gi|56759092|gb|AAW27686.1| SJCHGC01035 protein [Schistosoma japonicum]
gi|226474194|emb|CAX71583.1| Splicing factor, arginine/serine-rich 10 [Schistosoma japonicum]
gi|226474202|emb|CAX71587.1| Splicing factor, arginine/serine-rich 10 [Schistosoma japonicum]
gi|226474204|emb|CAX71588.1| Splicing factor, arginine/serine-rich 10 [Schistosoma japonicum]
gi|226474566|emb|CAX77530.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474570|emb|CAX77532.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474572|emb|CAX77533.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474574|emb|CAX77534.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474578|emb|CAX77536.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474580|emb|CAX77537.1| putative transformer-2 protein [Schistosoma japonicum]
Length = 199
Score = 39.3 bits (90), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|226474568|emb|CAX77531.1| putative transformer-2 protein [Schistosoma japonicum]
Length = 207
Score = 39.3 bits (90), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|348688880|gb|EGZ28694.1| hypothetical protein PHYSODRAFT_537360 [Phytophthora sojae]
Length = 460
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 109 LVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQL 168
+ L + ++SR + +R+ F +GEV DV + D P+G +V F++ +A+ A+
Sbjct: 232 ISLLVRNISRRLRPEDIRKEFERYGEVRDVYIPKDYYTKEPKGFAFVEFRSEREADDARR 291
Query: 169 YMDG 172
+DG
Sbjct: 292 NLDG 295
>gi|226474576|emb|CAX77535.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474582|emb|CAX77538.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474584|emb|CAX77539.1| putative transformer-2 protein [Schistosoma japonicum]
gi|226474586|emb|CAX77540.1| putative transformer-2 protein [Schistosoma japonicum]
Length = 198
Score = 39.3 bits (90), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|256079285|ref|XP_002575919.1| transformer-2-related [Schistosoma mansoni]
gi|360044869|emb|CCD82417.1| transformer-2-related [Schistosoma mansoni]
Length = 198
Score = 39.3 bits (90), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 99 PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRF 157
PR+ T + L ++ LS + E +L +IFS +G + DV+LV D RG G+V F
Sbjct: 67 PRENPTPSRCLGVF--GLSLHTQERNLYDIFSQYGNIEDVQLVFDNYTGRSRGFGFVYF 123
>gi|49204543|dbj|BAD24702.1| transformer-2b3 [Oryzias latipes]
Length = 321
Score = 39.3 bits (90), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E L+++FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 130 NACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAK 189
Query: 168 LYMDG 172
+G
Sbjct: 190 EKANG 194
>gi|49204551|dbj|BAD24703.1| transformer-2b4 [Oryzias latipes]
Length = 287
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E L+++FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 120 NACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAK 179
Query: 168 LYMDG 172
+G
Sbjct: 180 EKANG 184
>gi|157279827|ref|NP_001098427.1| transformer 2b isoform 2 [Oryzias latipes]
gi|49204538|dbj|BAD24701.1| transformer-2b2 [Oryzias latipes]
Length = 297
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E L+++FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 130 NACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAK 189
Query: 168 LYMDG 172
+G
Sbjct: 190 EKANG 194
>gi|357610129|gb|EHJ66837.1| transformer 2 isoform D [Danaus plexippus]
Length = 265
Score = 38.9 bits (89), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E + IFS FG V V++V+D RG +V F+++ DA+ A+
Sbjct: 105 SRCLGVFGLSLYTTEQQIHHIFSKFGPVDKVQVVIDAKTGRSRGFCFVYFESQDDAKVAK 164
Query: 168 -----LYMDGFHRLQSLLQLLQR 185
+ +DG R++ + QR
Sbjct: 165 NECTGMEIDG-RRIRVDYSITQR 186
>gi|22022315|dbj|BAC06514.1| transformer-2b [Oryzias latipes]
Length = 288
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E L+++FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 121 NACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAK 180
Query: 168 LYMDG 172
+G
Sbjct: 181 EKANG 185
>gi|340370268|ref|XP_003383668.1| PREDICTED: transformer-2 protein homolog beta-like [Amphimedon
queenslandica]
Length = 232
Score = 38.9 bits (89), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
Query: 66 RSRSPPPQRNKSPAVAARRGRSPAPPSKRASSPP---RKASTEN-----DSLVLYIDSLS 117
RS +PPP R RGRS S+ P R+ N + V+ + LS
Sbjct: 74 RSYTPPPHRRHY------RGRS-------GSNSPMSSRRRHVGNRFNPERNNVIGVFGLS 120
Query: 118 RNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
N+ LR+IF +G++ +V++V D N RG +V + DA +A+ +G
Sbjct: 121 LYTNDKDLRDIFEKYGKINEVQVVYDHQTNRSRGFAFVYYNDVEDAVEAKESCNG 175
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 38.9 bits (89), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 50/91 (54%), Gaps = 7/91 (7%)
Query: 87 SPAPPSKRASSPPRKASTENDSLV----LYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
+ A +++A +P +AST + + V LY+ ++ ++ E L+ +F FGE+ V+L
Sbjct: 244 TEAEKNRQARNP--EASTSHHNSVPFHRLYVGNIHFSITEQDLQNVFEPFGELEFVQLQK 301
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D RG G+V+F+ A +A M+GF
Sbjct: 302 DE-TGRSRGYGFVQFRDPNQAREALEKMNGF 331
>gi|49204567|dbj|BAD24706.1| transformer-2b7 [Oryzias latipes]
Length = 297
Score = 38.9 bits (89), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 35/65 (53%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
+ L + LS E L+++FS +G + DV +V D+ RG +V F+ DA++A+
Sbjct: 130 NACLGVFGLSLYTTERDLKDVFSKYGPLADVSIVYDQQSRRSRGFAFVYFENTPDAKEAK 189
Query: 168 LYMDG 172
+G
Sbjct: 190 EKANG 194
>gi|427786359|gb|JAA58631.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 383
Score = 38.9 bits (89), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ L+ +F +G+V DV + RG +VRF + D E A +
Sbjct: 16 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 75
Query: 171 DGF 173
DG+
Sbjct: 76 DGY 78
>gi|255730137|ref|XP_002549993.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240131950|gb|EER31508.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 442
Score = 38.9 bits (89), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 43/101 (42%), Gaps = 16/101 (15%)
Query: 72 PQRNKSPAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSN 131
P +KS A + G S +PPS L+I +LS N N L F
Sbjct: 295 PHASKSNDRAKQFGDSQSPPSD----------------TLFIGNLSFNANRDGLFNTFGE 338
Query: 132 FGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+G V+ + P+G GYV+F + +A+ A ++G
Sbjct: 339 YGNVISCRIPTHPDTQQPKGFGYVQFSSVDEAKAALEALNG 379
>gi|356524140|ref|XP_003530690.1| PREDICTED: heterogeneous nuclear ribonucleoprotein G-like 1-like
[Glycine max]
Length = 161
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 45/97 (46%), Gaps = 12/97 (12%)
Query: 85 GRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDR 144
GRS +P R S P T LY+ LS V E L++ FS G+V LV++
Sbjct: 51 GRSRSPIHGR-SEPTNPGDT------LYVTGLSSRVTERDLKKHFSKEGKVCSCFLVVEP 103
Query: 145 AVNLPRGSGYVRFKTRADAEKAQLYMDGFHRLQSLLQ 181
+ + G +V + DAE Y++ QS+L+
Sbjct: 104 STRISHGFAFVTMGSAMDAEHCNKYLN-----QSVLE 135
>gi|219363191|ref|NP_001137034.1| uncharacterized protein LOC100217203 [Zea mays]
gi|52140005|gb|AAU29328.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
gi|194693886|gb|ACF81027.1| unknown [Zea mays]
gi|194698082|gb|ACF83125.1| unknown [Zea mays]
gi|413955774|gb|AFW88423.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 1 [Zea mays]
gi|413955775|gb|AFW88424.1| ASF/SF2-like pre-mRNA splicing factor SRP32 isoform 2 [Zea mays]
Length = 285
Score = 38.9 bits (89), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S +Y+ +L ++ E + ++F +G++VD++L + P G +V F+ DAE+A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGKIVDIDL---KVPPRPPGYAFVEFEDPRDAEEAI 62
Query: 168 LYMDGF----HRLQ 177
DG+ HRL+
Sbjct: 63 AGRDGYNFDGHRLR 76
>gi|351724785|ref|NP_001238605.1| uncharacterized protein LOC100527350 [Glycine max]
gi|255632145|gb|ACU16425.1| unknown [Glycine max]
Length = 174
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 32/67 (47%)
Query: 105 ENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAE 164
+N LY+ LS V E L E FS G+V LV++ + RG ++ T DA
Sbjct: 65 KNAGTTLYVTGLSSRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFITMDTVEDAN 124
Query: 165 KAQLYMD 171
+ Y++
Sbjct: 125 RCIKYLN 131
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 87 SPAPPSKRASSPPRKASTENDSLV----LYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
+ A +++A +P +AS+ N+ LY+ ++ ++ E L+ +F FGE+ V+L
Sbjct: 255 TEAEKNRQARNP--EASSGNNHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQK 312
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D RG G+V+F+ A +A M+GF
Sbjct: 313 DE-TGRSRGYGFVQFRDPNQAREALEKMNGF 342
>gi|345480631|ref|XP_003424183.1| PREDICTED: hypothetical protein LOC100679022 [Nasonia vitripennis]
Length = 407
Score = 38.5 bits (88), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 60/154 (38%), Gaps = 52/154 (33%)
Query: 65 SRSRSPPPQRNKSPAVAAR----------------------------------------- 83
SRS+SP +R+ P R
Sbjct: 146 SRSKSPEVRRH-DPKEKERERDKERDHRDRDRDRDRDREREREREREREKKKPNAVPEKP 204
Query: 84 ----RGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVE 139
R R+P+P KR P T+ ++I L+RNV + H+ EIFS +G + ++
Sbjct: 205 KPKPRSRTPSPRRKRRERSPIPRPTK-----IHIGHLTRNVTKDHITEIFSTYGNIKMID 259
Query: 140 LVMDR-AVNLPRGSGYVRFKTRADAEKAQLYMDG 172
+D+ RG YV F+T +AE A +MDG
Sbjct: 260 FPIDKLHPAHCRGFAYVEFETADEAENAMKHMDG 293
>gi|67537390|ref|XP_662469.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|40741753|gb|EAA60943.1| hypothetical protein AN4865.2 [Aspergillus nidulans FGSC A4]
gi|259482272|tpe|CBF76595.1| TPA: nucleolin protein Nsr1, putative (AFU_orthologue;
AFUA_3G07710) [Aspergillus nidulans FGSC A4]
Length = 524
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 78 PAVAARRGRSPAPPSKRASSPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVD 137
PA + +R P A++ + + E S L++ +LS NV E L + F FGE+
Sbjct: 250 PADSKKRKAEEEP----AAASKKSKTEEGASANLFVGNLSWNVTEEWLHQEFEQFGEL-S 304
Query: 138 VELVMDRAVNLPRGSGYVRFKT 159
++ +R RG GYV F
Sbjct: 305 ARIMTERDTGRSRGFGYVEFTN 326
>gi|187610697|gb|ACD13597.1| transformer-2 protein [Penaeus monodon]
Length = 267
Score = 38.5 bits (88), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS + E L IF FG + V++V+D RG +V F++ DA +A+
Sbjct: 107 SKCLGVFGLSVHTTERQLYTIFDKFGPLEKVQVVLDSKTGKSRGFAFVYFESLKDASEAK 166
Query: 168 LYMDGF 173
G
Sbjct: 167 NECSGM 172
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 38.5 bits (88), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 87 SPAPPSKRASSPPRKASTENDSLV----LYIDSLSRNVNEGHLREIFSNFGEVVDVELVM 142
+ A +++A +P +AS+ N+ LY+ ++ ++ E L+ +F FGE+ V+L
Sbjct: 256 TEAEKNRQARNP--EASSGNNHAAPFHRLYVGNIHFSITESDLQNVFEPFGELEFVQLQK 313
Query: 143 DRAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
D RG G+V+F+ A +A M+GF
Sbjct: 314 DE-TGRSRGYGFVQFRDPNQAREALEKMNGF 343
>gi|413955773|gb|AFW88422.1| ASF/SF2-like pre-mRNA splicing factor SRP32 [Zea mays]
Length = 283
Score = 38.5 bits (88), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S +Y+ +L ++ E + ++F +G++VD++L + P G +V F+ DAE+A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGKIVDIDL---KVPPRPPGYAFVEFEDPRDAEEAI 62
Query: 168 LYMDGF----HRLQ 177
DG+ HRL+
Sbjct: 63 AGRDGYNFDGHRLR 76
>gi|225561416|gb|EEH09696.1| RNA splicing factor Pad-1 [Ajellomyces capsulatus G186AR]
Length = 584
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P S +S+ LY+ ++ ++ E L+++F FGE+ V+L +
Sbjct: 264 TEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE 323
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
RG G+V+F+ A +A M+GF
Sbjct: 324 EG-GRSRGYGFVQFRDPNQAREALEKMNGF 352
>gi|154282581|ref|XP_001542086.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
gi|150410266|gb|EDN05654.1| hypothetical protein HCAG_02257 [Ajellomyces capsulatus NAm1]
Length = 585
Score = 38.5 bits (88), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P S +S+ LY+ ++ ++ E L+++F FGE+ V+L +
Sbjct: 265 TEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE 324
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
RG G+V+F+ A +A M+GF
Sbjct: 325 EG-GRSRGYGFVQFRDPNQAREALEKMNGF 353
>gi|427794699|gb|JAA62801.1| Putative splicing factor sr protein superfamily, partial
[Rhipicephalus pulchellus]
Length = 368
Score = 38.5 bits (88), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ L+ +F +G+V DV + RG +VRF + D E A +
Sbjct: 1 LKVDNLTYRTTPEDLKRVFERYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDAL 60
Query: 171 DGF 173
DG+
Sbjct: 61 DGY 63
>gi|325090859|gb|EGC44169.1| RNA splicing factor [Ajellomyces capsulatus H88]
Length = 585
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P S +S+ LY+ ++ ++ E L+++F FGE+ V+L +
Sbjct: 265 TEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE 324
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
RG G+V+F+ A +A M+GF
Sbjct: 325 EG-GRSRGYGFVQFRDPNQAREALEKMNGF 353
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 38.5 bits (88), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P S +S+ LY+ ++ ++ E L+++F FGE+ V+L +
Sbjct: 280 TEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE 339
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
RG G+V+F+ A +A M+GF
Sbjct: 340 EG-GRSRGYGFVQFRDPNQAREALEKMNGF 368
>gi|327293227|ref|XP_003231310.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
gi|326466426|gb|EGD91879.1| RNA splicing factor [Trichophyton rubrum CBS 118892]
Length = 592
Score = 38.5 bits (88), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 43/113 (38%), Gaps = 18/113 (15%)
Query: 63 TNSRSRSPPPQRNKSPAVAARRG----------------RSPAPPSKRASSPPRKASTEN 106
T SRSRSP R P ARR PSK + P+ E
Sbjct: 139 TRSRSRSPLDDRYYRPTGRARRDGGDRDDEKRRSRRDRDSRRRSPSK--TPEPQLTEDER 196
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKT 159
D +++ L+ + L F G V + ++V DR +G GYV FK
Sbjct: 197 DRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGVGYVEFKN 249
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P S +S+ LY+ ++ ++ E L+++F FGE+ V+L +
Sbjct: 280 TEAEKNRQARNPEANVSGNQNSIPFHRLYVGNIHFSITESDLQKVFEPFGELDFVQLQKE 339
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
RG G+V+F+ A +A M+GF
Sbjct: 340 EG-GRSRGYGFVQFRDPNQAREALEKMNGF 368
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 38.5 bits (88), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ ++ ++ E L+ +F FGE+ V+L D RG G+V+F+ A +A M
Sbjct: 279 LYVGNIHFSITENDLQNVFEPFGELEFVQLQKDE-TGRSRGYGFVQFRDPNQAREALEKM 337
Query: 171 DGF 173
+GF
Sbjct: 338 NGF 340
>gi|332030467|gb|EGI70155.1| Transformer-2 protein-like protein beta [Acromyrmex echinatior]
Length = 242
Score = 38.1 bits (87), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 4/82 (4%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E ++ IFS +G V V++V+D RG +V F T DA+ A+
Sbjct: 133 SRCLGVFGLSIFTTEQQIQHIFSKYGPVERVQVVIDAKTGRSRGFCFVYFDTSEDAKVAK 192
Query: 168 LYMDGFH----RLQSLLQLLQR 185
G R++ + QR
Sbjct: 193 EQCTGMEIDGRRIRVDFSITQR 214
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 38.1 bits (87), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 93 KRASSP-PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
+R+ +P P+ E D +++ L+ + L F G V D ++V DR +G
Sbjct: 187 RRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKG 246
Query: 152 SGYVRFKT 159
GYV FK
Sbjct: 247 VGYVEFKN 254
>gi|212275520|ref|NP_001130064.1| uncharacterized protein LOC100191156 [Zea mays]
gi|194688202|gb|ACF78185.1| unknown [Zea mays]
gi|414869215|tpg|DAA47772.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878192|gb|AGE46059.1| arginine/serine-rich splicing factor SC32 transcript I [Zea mays]
Length = 256
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|427783535|gb|JAA57219.1| Putative splicing factor sr protein superfamily [Rhipicephalus
pulchellus]
Length = 401
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L +D+L+ L+ +F +G+V DV + RG +VRF + D E A +
Sbjct: 16 LKVDNLTYRTTPEDLKRVFEKYGDVGDVYIPRHPYTRESRGFAFVRFYDKRDCEDAMDSL 75
Query: 171 DGF 173
DG+
Sbjct: 76 DGY 78
>gi|414869213|tpg|DAA47770.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 283
Score = 38.1 bits (87), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 38.1 bits (87), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
Query: 93 KRASSP-PRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRG 151
+R+ +P P+ E D +++ L+ + L F G V D ++V DR +G
Sbjct: 189 RRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSKG 248
Query: 152 SGYVRFKT 159
GYV FK
Sbjct: 249 VGYVEFKN 256
>gi|168011572|ref|XP_001758477.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690512|gb|EDQ76879.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1153
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS+ ++E L + +++G + V ++ +R+ + RG +V F D E AQ
Sbjct: 382 SATLVVKGLSQKISEDDLYQALADWGPLRHVRVIKERSTGVSRGFAFVDFP---DVEAAQ 438
Query: 168 LYMDGF 173
MDG
Sbjct: 439 KMMDGI 444
>gi|427787637|gb|JAA59270.1| Putative transformer 2 alpha log [Rhipicephalus pulchellus]
Length = 267
Score = 38.1 bits (87), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S L + LS E L+E+FS +G + DV++V D RG +V F++ DA+ A+
Sbjct: 122 SRCLGVFGLSLYTQERDLKEVFSKYGPLEDVQVVYDAQSGRSRGFAFVYFESVDDAKMAK 181
Query: 168 LYMDGFH 174
+G
Sbjct: 182 DRCNGLE 188
>gi|414869214|tpg|DAA47771.1| TPA: hypothetical protein ZEAMMB73_478975 [Zea mays]
Length = 254
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|224035925|gb|ACN37038.1| unknown [Zea mays]
gi|448878196|gb|AGE46061.1| arginine/serine-rich splicing factor SC32 transcript III [Zea mays]
Length = 284
Score = 38.1 bits (87), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|448878202|gb|AGE46064.1| arginine/serine-rich splicing factor SC30 transcript III [Zea mays]
Length = 293
Score = 38.1 bits (87), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 16/76 (21%)
Query: 97 SPPRKASTENDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVR 156
SPPR T D L +F +G+VVDV + DR RG +VR
Sbjct: 57 SPPRFTGTTADDLF----------------PLFERYGKVVDVFIPRDRRTGDSRGFAFVR 100
Query: 157 FKTRADAEKAQLYMDG 172
+K +A+KA +DG
Sbjct: 101 YKYADEAQKAIDRLDG 116
>gi|357123012|ref|XP_003563207.1| PREDICTED: transformer-2 sex-determining protein-like [Brachypodium
distachyon]
Length = 241
Score = 38.1 bits (87), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 43/110 (39%), Gaps = 16/110 (14%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
LY+ LS + L + FS G+V D +VMD RG +V M
Sbjct: 112 LYVTGLSTRTSGDDLEKFFSKEGKVKDCHVVMDPRTKESRGFAFV-------------TM 158
Query: 171 DGFHRLQSLLQLLQREIVRELIMSVLILRRMGQNDQENPLPVGSHPPRHG 220
D + ++ L R ++ ++SV +R + P P PR G
Sbjct: 159 DNIEDARRCIKYLHRTVLEGRLISVAKAKRT---RKRTPTPGEYCGPRGG 205
>gi|315043566|ref|XP_003171159.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
gi|311344948|gb|EFR04151.1| RNA-binding protein rsd1 [Arthroderma gypseum CBS 118893]
Length = 589
Score = 38.1 bits (87), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 48/90 (53%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P +S S+ LY+ ++ ++ E L+ +F FGE+ V+L +
Sbjct: 271 TEAEKNRQARNPDAHSSNNQQSIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE 330
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
A +G G+V+F+ A +A M+GF
Sbjct: 331 EA-GRSKGYGFVQFRDPNQAREALEKMNGF 359
>gi|242040955|ref|XP_002467872.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|241921726|gb|EER94870.1| hypothetical protein SORBIDRAFT_01g035680 [Sorghum bicolor]
gi|448878354|gb|AGE46140.1| arginine/serine-rich splicing factor SR32 transcript I [Sorghum
bicolor]
Length = 286
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%), Gaps = 7/74 (9%)
Query: 108 SLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQ 167
S +Y+ +L ++ E + ++F +G +VD++L + P G +V F+ DAE A
Sbjct: 6 SRTIYVGNLPGDIREREVEDLFYKYGRIVDIDL---KVPPRPPGYAFVEFEDARDAEDAI 62
Query: 168 LYMDGF----HRLQ 177
DG+ HRL+
Sbjct: 63 AGRDGYNFDGHRLR 76
>gi|195612902|gb|ACG28281.1| splicing factor, arginine/serine-rich 2 [Zea mays]
gi|414869216|tpg|DAA47773.1| TPA: splicing factor, arginine/serine-rich 2 [Zea mays]
gi|448878194|gb|AGE46060.1| arginine/serine-rich splicing factor SC32 transcript II [Zea mays]
Length = 248
Score = 37.7 bits (86), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 107 DSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKA 166
D+ L + ++S L +F G+VVDV + DR RG +VR+K +A+KA
Sbjct: 14 DTFSLLVLNISFRTTADDLFPLFERCGKVVDVFIPRDRRTGDSRGFAFVRYKYADEAQKA 73
Query: 167 QLYMDG 172
+DG
Sbjct: 74 IDRLDG 79
>gi|388516667|gb|AFK46395.1| unknown [Lotus japonicus]
Length = 268
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 5/76 (6%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
N LY+ LS V E L E F+ G+V LV++ + RG ++ T DA +
Sbjct: 88 NGGNTLYVTGLSSRVTERDLEEHFAKEGKVASCFLVVEPRTRISRGFAFITMDTVEDANR 147
Query: 166 AQLYMDGFHRLQSLLQ 181
Y++ QS+L+
Sbjct: 148 CVKYLN-----QSVLE 158
>gi|148906727|gb|ABR16511.1| unknown [Picea sitchensis]
Length = 635
Score = 37.7 bits (86), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 30/61 (49%)
Query: 111 LYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEKAQLYM 170
L+I S E L + FS FG V DV +V D+ RG G++ + DA+ A +
Sbjct: 556 LFIAGFSFVTTERDLEKKFSRFGRVNDVRIVRDKLTGDSRGFGFLSLERDEDADAAIRAL 615
Query: 171 D 171
D
Sbjct: 616 D 616
>gi|336386026|gb|EGO27172.1| hypothetical protein SERLADRAFT_434943 [Serpula lacrymans var.
lacrymans S7.9]
Length = 284
Score = 37.7 bits (86), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%)
Query: 106 NDSLVLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMDRAVNLPRGSGYVRFKTRADAEK 165
N S VL + LS E L E FS FG V V +V D+ + RG G+++ T +A +
Sbjct: 80 NPSNVLGVFGLSIRTQERDLDEEFSRFGRVEKVTIVYDQRSDRSRGFGFIKMSTVEEATR 139
Query: 166 AQLYMDG 172
++G
Sbjct: 140 CIQELNG 146
>gi|296820488|ref|XP_002849949.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
gi|238837503|gb|EEQ27165.1| RNA splicing factor Pad-1 [Arthroderma otae CBS 113480]
Length = 595
Score = 37.7 bits (86), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 87 SPAPPSKRASSPPRKASTENDSL---VLYIDSLSRNVNEGHLREIFSNFGEVVDVELVMD 143
+ A +++A +P A++ + ++ LY+ ++ ++ E L+ +F FGE+ V+L +
Sbjct: 277 TEAEKNRQARNPDSHANSNHQAIPFHRLYVGNIHFSITESDLQNVFEPFGELDFVQLQRE 336
Query: 144 RAVNLPRGSGYVRFKTRADAEKAQLYMDGF 173
A +G G+V+F+ A +A M+GF
Sbjct: 337 EA-GRSKGYGFVQFRDPNQAREALEKMNGF 365
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,068,891,687
Number of Sequences: 23463169
Number of extensions: 268329626
Number of successful extensions: 2761734
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19283
Number of HSP's successfully gapped in prelim test: 17683
Number of HSP's that attempted gapping in prelim test: 2105120
Number of HSP's gapped (non-prelim): 326449
length of query: 385
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 241
effective length of database: 8,980,499,031
effective search space: 2164300266471
effective search space used: 2164300266471
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 78 (34.7 bits)